##maf version=1 scoring=roast.v3.3 a score=10500.000000 s hg38.chr14_KI270725v1_random 0 1 + 172810 G s panTro5.chr3 201994519 1 - 202621043 g i panTro5.chr3 N 0 C 0 s panPan2.chr3 204762558 1 - 205426864 g i panPan2.chr3 N 0 C 0 s nomLeu3.chr21 67579366 1 + 86207423 g i nomLeu3.chr21 N 0 C 0 s rheMac8.chr2 66062412 1 + 204787373 G i rheMac8.chr2 N 0 C 0 s macFas5.chr2 60994257 1 - 192460366 G i macFas5.chr2 N 0 C 0 s macNem1.NW_012018021v1 11106222 1 - 17224310 G i macNem1.NW_012018021v1 N 0 C 0 s cerAty1.NW_012009469v1 17418410 1 - 41321030 G i cerAty1.NW_012009469v1 N 0 C 0 s chlSab2.chr22 64489871 1 - 101219884 G i chlSab2.chr22 N 0 C 0 s manLeu1.NW_012098965v1 875849 1 - 924385 G i manLeu1.NW_012098965v1 N 0 C 0 s colAng1.NW_012114711v1 6716851 1 - 10587913 G i colAng1.NW_012114711v1 N 0 C 0 s calJac3.chr15 46052054 1 - 98464013 G i calJac3.chr15 N 0 C 0 s cebCap1.NW_016107467v1 261079 1 - 4835464 G i cebCap1.NW_016107467v1 N 0 C 0 s aotNan1.NW_018502033v1 3719981 1 + 4093027 G i aotNan1.NW_018502033v1 N 0 C 0 s otoGar3.GL873534 11060180 1 + 30473821 G i otoGar3.GL873534 N 0 C 0 a score=1048865.000000 s hg38.chr14_KI270725v1_random 1 128 + 172810 ATCTGCTGTGGtagaaataatttat-t--aaaaattctgtttacatttatcttatctcatcaattttagtaggtatttttacatta-----tatattagaaaaattgtgtacatataaataaacaaatatagtact s panTro5.chr3 201994520 128 - 202621043 atctgctgtggcagaaataatttat-t--aaaaattctgtttacatttatcttATCTCATCAATTTTAGTAGGTATTTTTAAATTA-----TATATTAGAAAAACTGTGTACATATAAATAAACAAATATAGTACT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762559 124 - 205426864 atctgctgtggcagaaataatttat-t--aaaaattctgtttacatttatcttATCTCATCAATTTTAGTAGGTATTTTTAAATTA-----TATATTAGAAAAACTGTGTACAT----ATAAACAAATATAGTACT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579367 128 + 86207423 atctgctgtggtagaaataatttat-t--aaaaattctgtttacatttatcttatctcatctattttagtaggtatttttaaatta-----tatattagaaaaattgtgtacatataaataaacaaatatagtact i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062413 131 + 204787373 ATCTGCTGTGGTAGAAATAATTTATAAAAAAAAAATCTGTTTACATTTATCTTATCTCATCAATTTTAGTAGGTATTTTTAAATCA-----TATATTAGAAAAATTGTGTACCTATAAATAAACAAATATAGTACT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994258 130 - 192460366 ATCTGCTGTGGTAGAAATAATTTAT-AAAAAAAAATCTGTTTACATTTATCTTATCTCATCAATTTTAGTAGGTATTTTTAAATTA-----TATATTAGAAAAATTGTGTACCTATAAATAAACAAATATAGTACT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106223 131 - 17224310 ATCTGCTGTGGTAGAAATAATTTATAAAAAAAAAATCTGTTTACATTTATCTTATCTCATCAATTTTAGTAGGTATTTTTAAATTA-----TATATTAGAAAAATTGTGTACCTATAAATAAACAAATATAGTACT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418411 130 - 41321030 ATCTGCTGTGGTAGAAATAATTTAT-AAAAAAAAATCTGTTTACATTTATCTTATCTCATCGATTTTAGTAGGTATTTTTAAATTA-----TATATTAGAAAAATTGTGTACCTATAAATAAACAAATATAGTACT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64489872 129 - 101219884 ATCTGCTGTGGTAGAAATAATTTAT-AC-AAAAAGTCTGTTTACATTTATCTTATCTCATCAATTTTAGTAAGTATTTTAAAATTA-----TATATTAGAAAAATTGTGTACCtataaataaacaaatatagtact i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875850 130 - 924385 ATCTGCTGTGGTAGAAATAATTTAT-TTAAAAAAATCTGTTTACATTTATCTTATCTCATCAATTTTAGTAGGTATTTTTAAATTA-----TATATTAGAAAAATTATGTACCtataaataaacaaatatagtact i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716852 129 - 10587913 ATCTGCTGCGGTAGAAATAACTTAT-AC-AAAAAATCTGtttacttttatctcatctcatcaattttagtaggtatttttaaatta-----tatattagaaaaattgtatacttataaataaacaaatatagtact i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052055 128 - 98464013 ATCTGCTATGGTAGAAATAACTCAT-T--Aaaaattctgtttacatttatcttatctcatcaattttactaggtatttt-aaactgtacattatattagaaaaattgtgtacatataaac----atatatagtact i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723652 127 + 27742158 ATCTGCTGTGGtagaaataactcat-t--aaaagttctgtttacatttatcttatctcatcaattttattaggtatttt-aaattgtacattatagtagaaaaa-tgtatatatataaat----atatatagtact i saiBol1.JH378125 N 0 C 0 s cebCap1.NW_016107467v1 261080 130 - 4835464 ATCTGCTGTGGTAGAAATGACTC---T--AAAAGATCTGTTTACATTTATCTTATGTCATCAATTTTACTAGGTATTTT-AAATCGTACATTATATTAGAAAAATTGTGCACATATAAATAAAGATACATAGTACT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3719982 132 + 4093027 ATCTGCTCTGGTAGAAATAACTCAT-T--Aaaaattctgtttccatttatcttatctcatcaattttactaggtatttt-aaattgtacattatgttagaaaaattgtgtacatataaataaacatataaaatact i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060181 129 + 30473821 ATCCACTCTGGTGGAAATCTCTTAT-T--AAAAATTCTGTTTATATCTATTTTATCTCATCAAATTTGGTAGGTACATT--AATTGCATATTATATTGGAAAAACAGTAAACATAC--ATAACTAAATACAGTATT i otoGar3.GL873534 C 0 C 0 a score=11504.000000 s hg38.chr14_KI270725v1_random 129 1 + 172810 g s panTro5.chr3 201994648 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762683 1 - 205426864 G i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579495 1 + 86207423 g i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062544 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994388 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106354 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418541 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490001 1 - 101219884 g i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875980 1 - 924385 g i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716981 1 - 10587913 g i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052183 1 - 98464013 g i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723779 1 + 27742158 g i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261210 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720114 1 + 4093027 g i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174371 1 + 958716 g i tarSyr2.KE939134v1 N 0 I 74 s otoGar3.GL873534 11060310 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 a score=612582.000000 s hg38.chr14_KI270725v1_random 130 73 + 172810 aagtttacttgctc-aaatattattacttatagagatgtgcatccaaaaatgttt-agaaactactgACAAACTA s panTro5.chr3 201994649 73 - 202621043 AAGTTTACTTGCTC-AAATATTATTGCTTATAGAGATGTCCATCCAAAAATGTTT-AGAAACTACTGACAAACTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762684 73 - 205426864 AAGTTTACTTGCTC-AAATATTATTGCTTATAGAGATGTCCATCCAAAAATGTTT-AGAAACTACTGACAAACTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579496 73 + 86207423 aagtttacttgctc-aaatattattacttatagagatgtgcatccaaaaatgttt-agaaactactgACAAACTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062545 72 + 204787373 AAGTTTACTTGTTC-AAATGTTATTACTTATAGAGATGTGCATCC-AAAATGTTT-AGAAACTACTTCCAAACTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994389 72 - 192460366 AAGTTTACTTGTTC-AAATGTTATTACTTATAGAGATGTGCATCC-AAAATGTTT-AGAAACTACTTCCAAACTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106355 72 - 17224310 AAGTTTACTTGTTC-AAATGTTATTACTTATAGAGATGTGCATCC-AAAATGTTT-AGAAACTACTTCCAAACTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418542 72 - 41321030 AAGTTTACTTGTTC-AAATGTTATTACTTATAGACATGTGCATCC-AAAATGTTT-AGAAACTACTTCCAAACTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490002 72 - 101219884 aagtttacttgctc-aaatgttattacttatagagatgtgcatcc-aaaatgttt-agaaactactTCCAAACTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 875981 72 - 924385 aagtttacttgttc-aaatgttattacttatagggatatgcatcc-aaaatgttt-agaaactactTCCAAACCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6716982 72 - 10587913 aagtttacttgctc-aaatgttattacttatagagatgtgtatcc-aaaatgttt-agaaactactTCCAAACTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052184 73 - 98464013 aa-tttacttactcaaaatgttattacttatagacatgtgcatttaaaaatgctt-agaaactacCAACAAACTG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723780 74 + 27742158 aagtttacttactcaaaatgttattacttctagagatgtgcatttaaaaatgttt-agaaactactgACAAACTG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261211 74 - 4835464 AAGTTTACTTACTCAAAATGTTATTACTTATAGAGATGTACATTTAAAAATGTTT-AGAAACTACTGACAAACTG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720115 74 + 4093027 aagtttacttactcaaaatgttattacttacagagatgtgcatttaaaaatgttt-agaaactactgACAATCTG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060311 73 + 30473821 AAGTTTACTTGTTC-ACATATT-TTACTAATAGGGATGTGTAGTCAAATACATTTGAGAAATTACGGACAAACTA i otoGar3.GL873534 C 0 C 0 e tarSyr2.KE939134v1 174372 74 + 958716 I a score=7279.000000 s hg38.chr14_KI270725v1_random 203 1 + 172810 T s panTro5.chr3 201994722 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762757 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579569 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062617 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994461 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106427 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418614 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490074 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876053 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717054 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052257 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723854 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261285 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720189 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 174446 1 + 958716 C i tarSyr2.KE939134v1 I 74 I 4561 s otoGar3.GL873534 11060384 1 + 30473821 C i otoGar3.GL873534 C 0 I 7 a score=1245435.000000 s hg38.chr14_KI270725v1_random 204 142 + 172810 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGATTGTAACTGAGTATGCCTGTAGCATAATCCTTAT----TAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTT-ATGTTTAAATACAGATA s panTro5.chr3 201994723 140 - 202621043 AAGT-AAATAACCTATCAAAGAGTTCTCAGAATCCCTCTAAGATCGTAACTGAGTATGCCTGTAACATAATCCTTAT----TAATTTTGCTAGAAAACT--GTTATGTTCAAATAT---AAAT-AAATATACTT-ATGTTTAAATACAGATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762758 140 - 205426864 AAGT-AAATAACCTATCAAAGAGTTCTCAGAATCCCTCTAAGATCGTAACTGAGTATGCCTGTAGCATAATCCTTAT----TAATTTTGCTAGAAAACT--GTTATGTTCAAATAT---AAAT-AAATATACTT-ATGTTTAAATACAGATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579570 142 + 86207423 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGATCGTAACTGAGTATGCCTGTAGCATAATCCTTAT----TAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTT-ATGTTTAAATACAGATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062618 147 + 204787373 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGACTGTAACTGAGTATGCCTGTAACACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTTAATGTTTAAATACAGATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994462 147 - 192460366 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAGTCCCTCTAAGACTGTAACTGAGTATGCCTGTAACACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTTAATGTTTAAATACAGATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106428 147 - 17224310 AAGT-AAATAACCTGTCCAAGAGTTCTCAGAATCCCTCTAAGACTGTAACTGAGTATGCCTGTAACACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTGTGTTCAAATAT---AAAT-AAATATACTTAATGTTTAAATACAGATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418615 148 - 41321030 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGACTGTAACTGAGTATGCCTGTAAGACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAATAAAATATACTTAATGTTTAAATACAGATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490075 147 - 101219884 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGACTGTAACTGAGTATGCCTGTAACACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTTAATGTTTAAATACTGATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876054 147 - 924385 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGACTGTAACTGAGTATGCCTGTAACACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTTAATGTTTAAATACAGATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717055 147 - 10587913 AAGT-AAATAACCTGTCAAAGAGTTCTCAGAATCCCTCTAAGACTGTAACTGAGTATGCCTGTAACACAATCCTTATTAAATAATTTTGCTAGAAAACTCAGTTATGTTCAAATAT---AAAT-AAATATACTTAATGTTTAAATACAGATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052258 147 - 98464013 AAGTAAAATAATCCGTTGAAGAGTTCTCAGAATCCCTCTAAGCTCATAACTAAGTTGGCCTATAGCAGAATCCTTATGAAATAATTTTACTAGAAAACGCAGTTAAGTTCAAATAT---AAAT-AAATGTACTT-ATATTTAAATACAGATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27723855 146 + 27742158 AGGT-AAATAATCTCTTGAAGAGTTCTCAGAATCCCTGTAAGCTCATAACTGAGTTGGCCTATGGCACAATCTTGATTAAATAATTTTACTAGAAAACTCAGTTAAGTTCAAATAT---AAAT-AAACGTACTT-ATACTTAAATACAGATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261286 146 - 4835464 AAGT-AAAAAATCTGTTGAAGAGTTCTCAGAATCCCTCTAAGCTCATAACTGAGTTGGCCTATAGCACAATCCTTATTAAATAATTTTACTAGAAAACTCAGTTAAGTTCAAATAT---AAAT-AAATGTACTT-GTATTTAAATACAGATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720190 146 + 4093027 AAGT-AAATAATCTATTGAAGAGTTCTCAGAATCCCTCTAAGCTCATAACTGAGTTGGCCTATAGCACAATCCTTATTAAATAATTTTACTAGAAAACTCAGTTAAGTTCAAATAT---AAAT-AAATGTACGT-ACATTTAAATACAGATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11060392 147 + 30473821 AAAC-AAGCAGATCATCTAGGAGTTCTAATAAT--CTGCAGTATTATAACTGAGTAGGTGTGTAACACAATCCCTGTTAAACAATCATACTAGGAAATTAAGTCACGTTCAAATACATAATAC-AAATCTTGCT-GTGCCCCAATACAAATA i otoGar3.GL873534 I 7 I 835 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=17185.000000 s hg38.chr14_KI270725v1_random 346 2 + 172810 CA s panTro5.chr3 201994863 2 - 202621043 CA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762898 2 - 205426864 CA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579712 2 + 86207423 CC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062765 2 + 204787373 CA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994609 2 - 192460366 CA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106575 2 - 17224310 CA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418763 2 - 41321030 CA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490222 2 - 101219884 CA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876201 2 - 924385 CA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717202 2 - 10587913 CA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052405 2 - 98464013 CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724001 2 + 27742158 CA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261432 2 - 4835464 CA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720336 2 + 4093027 CA i aotNan1.NW_018502033v1 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I e otoGar3.GL873534 11060539 835 + 30473821 I a score=168369.000000 s hg38.chr14_KI270725v1_random 348 21 + 172810 TCAATAAATGCAATGACTGTC s panTro5.chr3 201994865 21 - 202621043 TCAATAAATGCAATGACTGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762900 21 - 205426864 TCAATAAATGCAATGACTGTC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579714 21 + 86207423 TCAGTAAATGCAATGACTGTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062767 21 + 204787373 TCGCTAAATGCGATGATTGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994611 21 - 192460366 TCGCTAAATGCGATGATTGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106577 21 - 17224310 TCGCTAAATGCGATGATTGTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418765 21 - 41321030 TCGCTAAATGCGATGATTGTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490224 21 - 101219884 TCGCTAAATGCGATGATTGTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876203 21 - 924385 TCGCTAAATGCGATGATTGTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717204 21 - 10587913 TCGCTAAATGCGATGATTGTC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052407 21 - 98464013 TCACTAAATGTGATGATTCTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724003 21 + 27742158 TCACTAAATGTGATGATTCTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261434 21 - 4835464 TCACTGAATGTGATGATTCTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720338 21 + 4093027 TCACTAAATGTGATGATTCTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11061374 20 + 30473821 TCACCAAATGTGAC-ACTCTC i otoGar3.GL873534 I 835 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=2261221.000000 s hg38.chr14_KI270725v1_random 369 229 + 172810 ATTTCAT--TCCTTCGTAAAGCCTTTCAttctcatctcttccttctctttgctgatctt------cAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAAATGTCTGT-GGTTTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- s panTro5.chr3 201994886 229 - 202621043 ATTTCAT--TCCTTCATAAAGCCTTTCACTCTCATCTCTTCCTTCTCTTTGCTGATTTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAAATGTCTGT-GGTTTCTTGATAATTATATTCCATGAATATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204762921 229 - 205426864 ATTTCAT--TCCTTCATAAAGCCTTTCACTCTCATCTCTTCCTTCTCTTTGCTGATTTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAAATGTCTGT-GGTTTCTTGATAATTATATTCCATGAATATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579735 229 + 86207423 ATTTCAT--TCCTTTGTAAAGCCTTTCATTCTCATCGTTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGACAATTATATTCCATGAAAATAT-----------TAATCATACCTTTATTCCCAATTTTATATACAAGCTGGAATCCAGACTAAGCTTT--TTTATTT-- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66062788 229 + 204787373 ATTTCAT--TCCTTTGTAAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACTTTCGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994632 229 - 192460366 ATTTCAT--TCCTTTGTAAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106598 229 - 17224310 ATTTCAT--TCCTTTGTAAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17418786 229 - 41321030 ATTTCAT--TCCTTTGTAAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490245 231 - 101219884 ATTTCAT--TCCTTCTTAAAGTCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTA--TTTATTTAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876224 228 - 924385 ATTTCAT--TCCTT-TTAAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GATTTCTTGATAATTATATTCTATGAACATAT-----------TAATCATACCTTCACTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--TTTATTT-- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717225 230 - 10587913 ATTTCAT--TCCTTTGTAAAGCCTTTCATTTTCATCTCTTCCTTCTCTTTGCTGATCTT------CAAATTCTGAAGCTTCTTTAATGGGATTCCTGTTAGCAAGTTCTCTCCTTTCTGTGTCCTCCATACACAGATGTCTGT-GGTTTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTCGCTCCTAATTTTATATACAAGTTGGAATCCAAACTAAGCTTT--TTTATTT-A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052428 229 - 98464013 GTTTCAT--TCCTTCGTAAAGCTGCTCATTCCCACCTCTTGCTTCTCTTTGCTGATCTT------CACATTCTGGAGCTTCTTTAATGTGACTGTTGTTAGCAAGTTCTCTCTTTTCTATGTTCTCCATGCACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACTTTTGCTCCTAATTTTATATACAAGTTGGAATCCAAACTAAGCTTT--ATAACTT-- i calJac3.chr15 C 0 I 5 s saiBol1.JH378125 27724024 224 + 27742158 GTTTCAT--TCCTTCGTAAAGCCTCTCATTCCCACCT----CTTCTCTTTGCTGATCTT------CACTTTCTGAAGCTTCTTTAATGTGACTCTTGCTAGCAAGTTCTCTCTTTTCTATGTTCTCCACACACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTT-GAATCCAGACTAAACttt--ataattt-- i saiBol1.JH378125 C 0 I 5 s cebCap1.NW_016107467v1 261455 229 - 4835464 GTTTCAC--TCCTTTGTAAAGCCTCTCATTCCCACCTCTTCCTTCTCTTTGCTGATCTT------CACATTCTGAAGCTTCTTTAATGTGACTCTTATTGGCAAGTTCCGTCTTTTCTATGTTCTCCATACACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATATACAAGTTGGAATCCAGACTAAGCTTT--ATAATTT-- i cebCap1.NW_016107467v1 C 0 I 5 s aotNan1.NW_018502033v1 3720359 229 + 4093027 ATTTCAT--TCCTTCGTAAAGCCTCTCTTTCCCACCTCTTCCTTCTCGTTGCTGATCTT------CACATTCTGAAGCTTCTTTAATGTGACTCTTGTTAGCAAGTTCTCTCTTTTCTATGTTCTCCATACACAAATGTTTGT-GCTCTCTTGATAATTATATTCCATGAACATAT-----------TAATCATACCTTTGCTCCTAATTTTATTTACAAGTTGGAATCCAGACTAAGCTTT--ATAATTT-- i aotNan1.NW_018502033v1 C 0 I 5 s otoGar3.GL873534 11061394 224 + 30473821 ATCCCCT--TCCTTTAGGGGGCCCCTCATTCCCACC-CTTCCTCCTCTTTGCTGATCTT------CATGGCTAGTAGGACCTTTAATGGCATTCCTGTAGGCAGGGTCTCTCCTTTCTGGATCCTCCCTGAGCAGGTGTCTGA-GGTCTATTGAGGAATATATTCCATGAATACGT-----------TAATCATACCTTTGCTTCTAATTTTA--TACAAGTTTGAATCCAGACTTAGCTTT--TCTTA---- i otoGar3.GL873534 C 0 I 10 s canFam3.chr20 16598847 247 + 58134056 ATTTCATCATCCTTGATAAGGCCTCCCATACCCATCATTTCCTTATCTTTGCTATTTTTCTAGTCCACATCCCAAACATCCTGTAATGGGCTTCCAGTCAACAGATTCTGTCCTTTCCG-GTCCTCTGCACACAGAGGCTGGTGGGTTTATTAAGGAATATATTCCATGAATACATTCCATGAAAGGTACTCACTCCTTTACTTTTAATTTTA--CACAAGTTAAAATCCAGGCTCAGCATTGCTTTAAA--- i canFam3.chr20 N 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=910.000000 s hg38.chr14_KI270725v1_random 598 1 + 172810 A s panTro5.chr3 201995115 1 - 202621043 A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763150 1 - 205426864 A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67579964 1 + 86207423 A i nomLeu3.chr21 C 0 I 282 s dasNov3.JH563077 1835200 1 - 2187301 A i dasNov3.JH563077 N 0 C 0 e canFam3.chr20 16599094 0 + 58134056 C e tarSyr2.KE939134v1 174447 4561 + 958716 I e saiBol1.JH378125 27724248 5 + 27742158 I e otoGar3.GL873534 11061618 10 + 30473821 I e aotNan1.NW_018502033v1 3720588 5 + 4093027 I e cebCap1.NW_016107467v1 261684 5 - 4835464 I e calJac3.chr15 46052657 5 - 98464013 I e colAng1.NW_012114711v1 6717455 0 - 10587913 C e manLeu1.NW_012098965v1 876452 0 - 924385 C e chlSab2.chr22 64490476 0 - 101219884 C e cerAty1.NW_012009469v1 17419015 0 - 41321030 C e macNem1.NW_012018021v1 11106827 0 - 17224310 C e macFas5.chr2 60994861 0 - 192460366 C e rheMac8.chr2 66063017 0 + 204787373 C a score=399812.000000 s hg38.chr14_KI270725v1_random 599 38 + 172810 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA s panTro5.chr3 201995116 38 - 202621043 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763151 38 - 205426864 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580247 38 + 86207423 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i nomLeu3.chr21 I 282 C 0 s rheMac8.chr2 66063017 38 + 204787373 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994861 38 - 192460366 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106827 38 - 17224310 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419015 38 - 41321030 AAAAAATTACAA-------TCTCAAATCAGTAAATGCTTCTGCCA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490476 38 - 101219884 AAAAAATCACAA-------TCTCAAATCAATAAATGCTTCTGCCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876452 38 - 924385 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717455 38 - 10587913 AAAAAATTACAA-------TCTCAAATCAATAAATGCTTCTGCCA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052662 36 - 98464013 --AAAAACAGAA-------TCTCAAATCAAAATATCCTTCTGCCA i calJac3.chr15 I 5 C 0 s saiBol1.JH378125 27724253 36 + 27742158 --aaaaataCCA-------TCTCAAATCAAAAAATCCATCTGCCA i saiBol1.JH378125 I 5 C 0 s cebCap1.NW_016107467v1 261689 36 - 4835464 --AAAAATACAA-------TCTCAAATAAAAAAATCCTTCTGCCA i cebCap1.NW_016107467v1 I 5 C 0 s aotNan1.NW_018502033v1 3720593 36 + 4093027 --AAAAATACAA-------TCTCAAATCAAAAAATCCTTCTGCCA i aotNan1.NW_018502033v1 I 5 C 0 s otoGar3.GL873534 11061628 44 + 30473821 AAAGAAATAGAAATCTCGTTCTCCAATCCACAGATGCTTCTGCC- i otoGar3.GL873534 I 10 C 0 s canFam3.chr20 16599094 38 + 58134056 ACAAAGTTGTAA-------TCTCCATTCAACAAATGCTTCTGTAA i canFam3.chr20 C 0 I 24 s dasNov3.JH563077 1835201 38 - 2187301 AAAAAATCATAA-------TCTCAAATCAACAAATGCTTCAGCCA i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=5469316.000000 s hg38.chr14_KI270725v1_random 637 561 + 172810 TATTTTTCTCT--TTCATTT----------------AAGCATATTGCTAT--------AATTA------------CACTTACTGTTCTTTTCTCA------CTAATTTATCACTCTTCTTCTTC---CT---TTCTTTATTATCCATGTAAATTTTAACCTTTCTAAGATAAACTGA----------TTTG-TTTTTTTGCCGTGTAGTAAATGATCCTCCTACTTCTAGTCAAATTCTC--------------------------------------------------CACAGCATCTATCAGAGTCTAGTTGTTACTAAAC------------AATGGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-GATGATT-CCTAGTGAAGTTCATCACTCCCAGTGCATGAGGTAAGAGTT-ACA-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAATAATAAAATTCAATGCAATTTGCTCACAGAT-----GTACTTTTTCAGCTA-----------------AACTGGGTCTCAGGATCCACATGTAGTTCCTCAGCGCTGTAGCGCAGCTCTGATT-T-GTG---CACA-----------------------TATGTGCTCACGTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGAGGAAATAGTTCTTTAGAAGATAAAACTCTCAGTGTAGGAC s panTro5.chr3 201995154 564 - 202621043 TATTTTTCTCTCTTTCATTT----------------AAGCATATTGCTAT--------AATTA------------CACCTACTGTTCTTTTCTCA------CTAATTTATCACTCTTCTTCTTCTTCCT---TTCTTTATTATCCATGTAAATTTTAACCTTTCTAAGACAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAATGATCCTCCTACTTCTAGTCAAATTCTC--------------------------------------------------CACAACATCTATCAGAGTCTAGTTGTTACTAAAC------------AATGGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-GATGATTTCCTAGTGAAGTTCATCACTCCCAGTGCGTGAGGTAAGAGTT-ACA-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAATAATAAAATTCAATGCCATTTGCTCACAGAT-----GTACTTCTTCAGCTA-----------------AACTTGGTCTCAGGATCCACATGTAGTTTCTCAGCGCTGTCGCGCAGCTCTGATT-T-GTG---CACA-----------------------TATGTGTTCACGTTAACA---TCA-----TACTTTGGAGGTACTT---AA---CATAAAAGACGAAATAGTTCTTTAGAAGATAAAACTCTCAGTGTAGGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763189 567 - 205426864 TATTTTTCTCTCTTTCATTT----------------AAGCATATTGCTAT--------AATTA------------CACCTACTGTTCTTTTCTCA------CTAATTTATCACTCTTCTTCTTCTTCCT---TTCTTTATTATCCATGTAAATTTTAACCTTTCTAAGACAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAATGATCCTCCTACTTCTAGTCAAATTCTC--------------------------------------------------CACAACATCTATCAGAGTCTAGTTGTTACTAAAC------------AATGGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-GATGATTTCCTAGTGAAGTTCATCACTCCCAGTGCGTGAGATAAGAGTT-ACA-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAATAATAAAATTCAATGCCATTTGCTCACAGAT-----GTACTTTTTCAGCTA-----------------AACTTGGTCTCAGGATCCACATGTAGTTTCTCAGCGCTGTAGCGCAGTTCTGATT-T-GTG---CACA-----------------------TATGTGTTCACGTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGACGAAATAGTTCTTTAGAAGATAAAACTCTCAGTGTAGGAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580285 559 + 86207423 TATTTTTCTCTCTTTCATTT----------------AATCATACTGCTAT--------AATTA------------TACTTACTGTTATTTTCTCA------CTAATTTATCACTCTTCTTCTTC---CT---TTCTTTATTATCCATGGAAATTTTAACCTTTCTAAGATAGACTGA----------TT---TTTTTTGGCCACATACTAAATGATCCTCCTACTTCTAGTCAAATTCTC--------------------------------------------------CACAGCATCTATCAGAATCTA---GTTACTAAAC------------AATTGTTGCAGTTTTGTGTTGTGG-TGACTTACCAGAAAGAAC-AATGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTT-ATG-TTTCAGCAAATGCAGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCAGTGCCATTTGCTCACAGAT-----GTACTTTTTCAGCTA-----------------AACTGGGTCTCAGGATCCACATGTAGTTTCTCAGCGCTGCAGCGCAGCTCTGATT-T-GTG---CACA-----------------------TATGTGTTCACTTTAACAACATCA-----TGCTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACACTCAGTGTAGGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063055 580 + 204787373 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGCGTATTGCTAT--------AATTA------------CACTTACTGTTATTTTCTCA------CTAATTTATCACTCACCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAACCTTTCTAAGATAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAAAGATCCTCCTACATCTAGTCAAATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTTAACG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCAATGCCTTTTGCTCACAGAT-----ACACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGCTGTAGCGCAGCTCTGACT-T-GTG---CACA-----------------------TATGTGTTCACTGTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGTAAGGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60994899 580 - 192460366 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGCGTATTGCTAT--------AATTA------------CACTTACTGTTATTTTCTCA------CTAATTTATCACTCACCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAACCTTTCTAAGACAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAAAGATCCTCCTACATCTAGTCAAATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTTAACA-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCAATGCCTTTTGCTCACAGAT-----ACACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGCTGTAGCGCAGCTCTGACT-T-GTG---CACA-----------------------TATGTGTTCACTGTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGTAAGGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11106865 580 - 17224310 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGCGTATTGCTAT--------AATTA------------CACTTACTGTTATTTTCTCA------CTAATTTATCACTCACCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAACCTTTCTAAGACAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAAAGATCCTCCTACATCTAGTCAAATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATCACTCCCAGTGCATGAGATAAGAGTTAACG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCAATGCCTTTTGCTCACAGAT-----ACACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGCTGTAGCGCAGCTCTGACT-T-GTG---CACA-----------------------TATGTGTTCACTGTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGTAAGGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419053 576 - 41321030 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGCGTATTGCTAT--------AATTA------------CACTTACTGTTATTTTCTCA------CTAATTTATCACTCACCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAAC----CAAAGACAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAAAGATCCTCCTACGTCTAGTCAAATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTACGCCCAGTGCATGAGATAAGAGTTAACG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCAATGCCTTTTGCTCACAGAT-----ACACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGCTGTAGCGCAGCTCTGACT-T-GTG---CACA-----------------------TATGTGTTCACTGTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGTAAGGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64490514 590 - 101219884 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGCGTATTGCTAT--------AATTA------------TACTTACTGTTATTTTCTCA------CTAATTTATCACTCATCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAACCTTTCTAAGATAGACTGAtttttttttttttt-tttttttGCTGTGTAGTAAAAGATCCTCCTACGTCTAGTCAAATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTATTCCCAGTGCATGAGATAAGAGTTAACG-TTTCAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCGATGCCATTTGCTCACAGAT-----ATACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGTTGTAGCAGAGTTCTGACT-T-GTG---CACA-----------------------TACGTGTTCACTTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGTAAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 876490 580 - 924385 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGTGTATTGCTAT--------AATTA------------CACTTACTGTTATTTTCTCA------CTAATTTATCACTCACCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAACCTTTCTAAGACAGACTGA----------TTTG-TTTTTTTGCCATGTAGTAAAAGATCCTCCTACGTCTAGTCAAATTCCC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AATTGTTGCAGTTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATGAGATAAGAGTTAACG-TTTCAGCAAATGTGGGCCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAATAAAATTCAACGCCTTTTGCTCACAGAT-----ACACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGCTGTAGCGCAGCTCTGACT-T-GTG---CACA-----------------------TATGTGTTCACTGTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGTAAGGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6717493 581 - 10587913 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGCAGCGTATTGCTAT--------AATTA------------TACTTACTGTTATTTTCTCA------CTAATTTATCACTCATCTTCTTCTTCCT---TTCTTTATTATCCGTGTAAATTTTAACCTTTCTAAGAAAGACTGA----------TTTGTTTTTTTTGCCATGTAGTAAAAGGTCCTCCTACGTCTAGTCAAATTCCC--------------------------------------------------CATGGCATCTATCAGAGTGTAG----TACTAAAC------------AATTATTTCAATTTTGTGCTGTGG-TGACTTACCAGAAAGAAC-AACGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATCAGATAAGAGTTAACG-TTTGAGCAAATGTGGACCTAAAAACAAAAGGTGAACCACTTCATCAGATGCTTAACAACAAAATTCAATGCCATTTGCTCACAGAT-----ATACTTTTTCAGCTA-----------------AACTAGGTCTCAGGATCCACATGCAGTTTCTCAGCGCTGTGGCGCAGCTCTGACT-T-GTG---CACA-----------------------TATGTGTTAACTTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATAGTTCTTTAGAAGATAAAACTCCCAAGGAAAGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46052698 521 - 98464013 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGTGGCATATTGATAC--------AATGA------------TCCTTACTGTTGTTTTCTTA------CTAATTTATCACTCATCTTCTTCTTTC----TTTCTTATTATCCATGTAAATTTTATCCTTTCTAAGATAGATTGG----------TT---ATTTTT--CACTGTAGTAAAAGATCCTTCTACTTCTAGTAAAGTTCTC--------------------------------------------------CACAGCATCTATCAGAGTGTAA----TACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-CGACTCACCATAAAGAAC-AATGATTTCCTAGTGAAGTTCCTTACTCCCAGTGCATGAGATAAGAGTT-ACG-TTTCAGCAATTGTGGA-CTAAAAACAAAAGGTGAAACACTTCATCAGATGTTTCACAA--------------------------------------------------------------------------TCAGGATCCACATATAGTTTCGCAGTGCTGTATCAGAGCTCTGATT-T-GTG---CACA-----------------------TATTTGTTCACTTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAAATGAAATATTTCTTTAGAAGATAAAATGCTTGATGTAGGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724289 522 + 27742158 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGTAGCATATTGATAC--------AATGA------------TCCTTACTGTTATTTTCTTA------TTAATTTATCACTCATCTTCTTCCT------TTCTTTATTATCCATGTAAATTTTA----TTCTAAGATAGATTGA----------TTTG-TTTTTT--CCCTGTAGTCAAAGATCCTCCTACTTCTAGTCAAGTTTTC--------------------------------------------------CATAGCATCTATCAGAGTCTAG----TACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-TGCCTCACTGTAAAGAACAAATGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATGAGATAAAAGTT-ACG-TTTCAGCAGTTGTGGACCTAAAAACAAAAGGTGAAACACTTCATCAGACGCTTCACAA--------------------------------------------------------------------------TCAGGATCCACATGTAGTTTCTCAGTGCTATATCAAAGCTCTGAGA-C-ACATATCAAG-----------------------TATGTGTTCACTTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAATGATGAAATATTTCTTTAGAAGATAAAAAGCTAAATTTAGGAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 261725 522 - 4835464 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGTGGCGTATTGATAC--------AAGGA------------TCCTTACTGTTATTTTCTTA------CTAATTTATCACTCATCTTCTTCCT------TTCTTTATTATCCATGTAAATTTTATCCTTTCTAAGATAGATTGA----------TTTG-TTTTTT--CCCTGTAGTAAAAGATCCTCCTACTTCTAGTCAAGTTCTC--------------------------------------------------CACAGCATCTATCAGAATCTAG----CACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-TGACTCACCATAAAGAAC-AATGATTTCCTAGTGAAGTTCATTAGTCCCAGTGAATGAGATAAAAGTT-ACA-TTTCAGCAGTTGTGGACCTAAAAACAAAAGGTGAAACACTTCTTCAGATGCTTCACAA--------------------------------------------------------------------------TCAGGATCCACATGTAGTTTCTCAGTGCTATATCAAAGCTCTGATT-T-GTG---CACG-----------------------TATGTGTTCACTTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATATTTCTTTAGAAGATAAAATGCTTAATGTAGGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3720629 525 + 4093027 TATTTTTCTCTCTTCCATTTTAGGAATTCCTGTTTGTGGCATATTGATAC--------AATGA------------TCCTTACTGTTATTTTCTTA------CTAATTTATCACTCATCTTCTTCTTCCT---TTCTTTATTATCCATGTAAATTTTATCCTTTCTAAGTTAGATTGA----------TTTG-TTTTTT--CCGTGTAGTAAAAGATCCTCCTACTTCTAGTCAAGTTCTC--------------------------------------------------CACAGCATCTATCAGAGTCTAG----TACTAAAC------------AGTAATTGCAGTTTTGTGCTGTGG-TGACTCACCATAAAGAAC-AATGATTTCCTAGTGAAGTTCATTACTCCCAGTGCATGAGCTAAGAGTT-ACA-TTTCAGCAGTTGTGGACCTAAAAACAAAAGGTGAAACACTTCATCAGATGCTTCACAA--------------------------------------------------------------------------TCAGGATCCACCTGTAGTTTCTCAGTGCTATATCAAAGCTCTGATT-T-GTG---CACG-----------------------TATGTGTTCACTTTAACAACATCA-----TACTTTGGAGGTACTT---AA---CATAAAAGATGAAATATTTCTTTAGAAGATAAAACACTTAATGTAGGAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11061672 569 + 30473821 -TTTTACCTCTTTTTCTTATTAGGAATTCCTGTTTGC-----ATTGATATTAAATATCAATAT------------TTGTTACTGTTTTGTTCTTT------CTAACTTATCACTCATCTTCTCCTTCCTCCCTTCTTTATTATCAGTGTAATTATTAATCTTTATAAACTAGACTTA----------TT---TTTTTT---CATGTGGCAAAGTA----CCTACTTCTATTTGAATTCCC--------------------------------------------------CACGTCATGTATCAGAGTATAG----CTCCAAAC------------AATAATTGGAGCTTTGCACTGTAGTTGACTTTCCATAAAG----AATGATTTTCTGGTCAAATTCATTGCTCCCAGGGCGTGAGGTTAGAATT-ACATTTTTAGCAATTGTAGACCTAAAAACAGCAGGTGAAGAAATTTATCAGATGCTTAAAAATAAAAGTGAATGGCATTTGGTCATGGTC-----TTCCTTTTTCAGGTA-----------------AACTGGGTCTCAGGACCCAAATGTAGTTT--GAGTGCAATATTGCAACTC----------A---GCCA-----------------------TAAACGTTCACTTTAACAGCTTCATATACTATTCCAGAGATAGCT---GA---TATCAAAGATGAAATAGCTCTTTAAGAGATGAGAATCTCAAGGCAGGAC i otoGar3.GL873534 C 0 I 3768 s mm10.chr6 45768048 641 - 149736546 --TGTTTTTTTCCTTCAT----------------------------------------AAATC------------CCCTCAC-ATTATTTTCTGGTCCAGTCTCATTTATAGTACATCTTCCTCAT-CT---TCATTTATTAACCATGTAAATTTTAACCTTTCTGA-ACAGGCCAA----------TT---CTTTCT-----GGTGGTAAAAG-CCTTCTTATTCCTACTTGAGttttcttttcttttttttttttttcttttttttttttttttttttttttttttttCACAGCATCAACCAGAGAGCAG----TACTAGGTAAGGGCTCTATAAATATTTGCAGGTTTGCGCTGTGGTTGACCTACCATAAAGAAC-AATGATTTCCTAAGGAAATTCACTGCTCCCAGTGCATGAGGCAAGAGCT-AGA-TTTTAGCAACTGTGTACCTAAAACTAAAGAGCAAACAACTTCATGGGAAGCTGAACAATAAAACTGAAAGGCATTTTTATTGAGAT----CTTATTTGTTCAGCTAAGCTGAGGTCCTGGTTTAACTGGGCCCCAGAATCCAAATATAGTTTTATAGT--TGTAACACTGCTTGGGTT-CAGAG---CACATTGCTAGTCAGGATGCAATACATTATTTTTTTACTGAAACAGACTCA-----TTCATAGG-GATGGTT---AA---TGTTCA-GATGTATCAGTCCCCTACAAGATTAGAATATCAGTTCAGGAT i mm10.chr6 N 0 C 0 s canFam3.chr20 16599156 624 + 58134056 CATTTTTCTCTCTCCCAGTTTAGGCATCCCTGTTTGCAATGTATTCATAT--------AATGATCCTCTAAATATTCCTTACTGTTTTATACTTC------CTACTTTATCATTCATCTTCTCCTTCCTCCCCTCTTTATTATCCATGTAAATTCTAACCT--CTAAACTAGACAGG----------GT-A-CCCCCCGCCCCGGGAATAAAGGAC---CCTACTCATATTTGAATTCTC--------------------------------------------------CATAGCTTCTATCAGAGTATAT----TATTAAACAAAGACTCAGTAAATATTTGCAGCTTTGTGCTGTGGCTGCTTTGCCATAAGAAAC-AACGGTTTCCTAGTGACATTCACTGCTCCTACTGCCTGAGGTAAGAAAC-ACA-TTTTAGCAATTGTGGACCTAAAAAGGAGAGGTAAACGACTTCATCAGAAACCTAACAACAAAATTGAATGCCACTTAGTCACGGTC-----TTACTTTTTCAGCTA-----------------ATCCAGGTCTTAGGAGTCACAGGCAGTTT--TAACACTATGTTGCAACTCTGGTTCT-GTG---TACACTAAATAAGAGGAAATAATATCAGACGCGTTCACTTTAACAATACCA-----TACTTTGGAGGTAATTAACAA---CATAAATAATGAATTAGCTGTTTAGGAGAGTAGAAGCTCAATCTAGG-- i canFam3.chr20 I 24 C 0 s dasNov3.JH563077 1835239 625 - 2187301 TAATTTTCTCTATTCCATTTTTGGAATCCCTTGATACAGTACATTAATAT--------AATAGTCCTTTAAATATTCCTTACTGTTTGGTTCTCA---------AAGCATTGCCCACCTTCTCTTTCCTCCAGTCTCTGTTATTCATGTAAATTTTTACCCTTCTAAACTAGACTAA----------ATTA-CTCTTT-------TGGGTAAGGATTCTCCTACTTATATTTTAATTCTC--------------------------------------------------CACATCATCTTTCTGAGTATAT----TACTAAATAAGAGTACAATAAATATATGTTGCTTTATGCTGTGATCAACTTGTCATAAAGAAC-ATCCATTTCCTAGTGAAACTCACTGGTCCCAGGGCATGAGGTAGAAATT-ACA-TTTTAGCAGTTGTGTACCTAAAAAGAAAAAGTTAGCACCTTCATCAGATAATTCACAATGGAATTTAATACTATTTGGTTATGGTTTTGTCTTACTTTTTCTACTA-----------------ATCCAGGTCCTGGGACCCAAATGTAGTTA--CAGCTCTACACTGTAGCTCTGATTCT-GTA---CACACTAAATAATAGAAGCCAATGTCATATGTACTCACTTT--TAACATCA-----TATTTTGGAGGTAGCT---AAAACCAGAAAAGGAAAATTAGCTCTTTTGGAGAGTAGAATCTCAGTCTAGGAG i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=1928773.000000 s hg38.chr14_KI270725v1_random 1198 193 + 172810 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTCCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------TGCTTATAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACCTCTGCTACATTACAT--CATGCTCACACATCACTTTAGGAAAAGTTAAAAGAGTTATAACAAAA s panTro5.chr3 201995718 193 - 202621043 ATCTGATTTTTAAT-ATTTTCTTTTCTAGTTAAGTCCTAAAACCATCAAATGACTGCAGTTCTCAATT--------------------------TGCTTATAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACCTCTGCTACATTACAT--CATGCTCACACATCACTTTAGGAAAAGTTAAAAGAGTTATAACAAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763756 193 - 205426864 ATCTGATTTTTAAT-ATTTTCTTTTCTAGTTAAGTCCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------TGCTTATAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACCTCTGCTACATTACAT--CATGCTCACACATCACTTTAGGAAAAGTTAAAAGAGTTATAACAAAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67580844 192 + 86207423 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTCCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CACTTATAGTGAGGCTAGAAAATGATAT---GAGGTCTCAGCAATATTCTTAAAGGAAATTTGGACCTCTGCTACATTACAT--CATGCTCACACATCACTTT-GGGAAAGTTAAAAGAGTTATAACAGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66063635 194 + 204787373 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGTAATATTCTTAAAGGAAATTTGGACTTCTGCTACATTGCATACCATGCTCACACATCTC-TTAGGAAAGGTTAAAGGAGTTATAACAAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60995479 195 - 192460366 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGTAATATTCTTAAAGGAAATTTGGACTTCTGCTACATTGCATACCATGCTCACACATCTCTTTAGGAAAGGTTAAAGGAGTTATAACAAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11107445 195 - 17224310 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGTAATATTCTTAAAGGAAATTTGGACTTCTGCTACATTGCATACCATGCTCACACATCTCTTTAGGAAAGGTTAAAGGAGTTATAACAAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17419629 195 - 41321030 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGTTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAATAATATTCTTAAAGGAAATTTGGACTTCTGCTACATTGCATACCATGCTCACACATCTCTTTAGGAAAGGTTAAAAGAGTTATAACAAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491104 195 - 101219884 ACCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------TGCTTACAGTGAGGCTAGAAGATGATAT---GAGGTCTAAGCAATATTATTAAAGGAAATTTGGACTTCTGCCACATTGCATACCATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTTATAACAAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877070 195 - 924385 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CATTTACAGTGAGGATAGAAGATGATGT---GAAGTCTAAATAATATTCTTAAAGGAAATTTGGACTTCTGCTACATTGCATACCATGCTCACACATCTCTTTAGGAAAGGTTAAAAGAGTTATAACAAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718074 195 - 10587913 ATCTGATTTTTAAT-ATTTTCTTTTCTTGTTAAGTTCTAAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGCTTACAGTGAGGCTAGAAGATGATGT---GAGGTCTAAGCAATATTCTTAAAGGAAATTTGGACTTCTGCTACATTGCATACCATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTTATAACAAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053219 196 - 98464013 ATCTGATTTTCAGTAATTTTCTTTTCTTGTTAAGTCCTCAAACCATCAAATGATTGCAGTTCTCACTT--------------------------TGATTATGGTAAGTCTAGAAGATGATGT---GAGGTCTAAGCAATATTTTTAAAGAAAATTTCGGCCTCTGTTACCTTACATATGATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTTATAACAAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27724811 194 + 27742158 ATCTGATTTTCAAT-ATTTTCTTTTC-TGTTAAGTCATCAAACCATCAAATGATTGCAGTTCTCAATT--------------------------AGATTATGGTGAGTCTAGAAGACGATGT---GAGGGCTAAGCAATATTCTTAAAGAAAATTTTGGCCTCTGTGACCTTACATATCATGCTCACACATCTCTTTAGGAAAAGTAAAAAGAGTAATAACAAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 262247 195 - 4835464 ATCTGATTTTCAAT-GTTTTCTTTTCTTGTTAAGTCCTCAAACCATCAAATGACTGCAGTTTTCAATT--------------------------CGATTATGGTGAGTCTAGAAGATGATGT---GAGGGCTAAGCAATATTCTTAAAGAAAATTTTGGCCTCTGTGACCTTACGTATCATGTTCACACATCTCTTCAGGAAAAGTTAAAAGAGTAATAACAAAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721154 193 + 4093027 ATCTGATTTTCAAT-ATTTTCTTTTCTTGTTAAGTCCTCAAACCATCAAATGATTGCAGTTCTCAATT--------------------------CGATTATGGTGAGTCTAGAAGACGATGT---GAGGGCTAAGCAATATTCTTAAAGAAAATTTTGGC--CTGTTACCTTACATATCATGCTCACACATCTCTTTAGGAAAAGTTAAAAGAGTAATAACAAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11066009 157 + 30473821 ATCTGATCTTCAAT-GTTT--GTTTCTAATTAAATCCTAAAATCATCAAATGATTGTATTTGCCAAAT--------------------------TGCCTAA--------------------------------------ATTCTTACTAGAAACTGTGGCCTTTGCCATATTAC-TAGCATGATCACACATCTCTTTAAGGAAATTTAAGAGAGCTATAACAAAG i otoGar3.GL873534 I 3768 C 0 s mm10.chr6 45768689 170 - 149736546 -------ATTTAAT-GTTT------CTCTTTAAATCTTAACATTAGCAAATGGCTATATTTTTCAATT--------------------------TTCCATGAATTAAG---GAAGATATTCTAGGAAGTTATTACCAATATCCTTAAA--------TGTTCATTACTGTATTACTAGCCATGTT----CATTGTTTTAGAAAAACAGAAGAGATTTATTGCAAAA i mm10.chr6 C 0 I 410 s canFam3.chr20 16599780 214 + 58134056 -TCTGATTTTTAAT-ATTTTTTCTCTAT----AATCCTAAAATGATCAAATGATTTTACTATTCAAATTTTAA--GATTAAAACTAATACATTATGCCTATAATGAGAGCAGAAGACACTGG---GAGGTCTTAGCAATATGCTTAAAGAAAATGTTGGCCTTTACTACATTATTTACCATGCTCATATATCCTTTCAGTAAAATTTAAGAGAACTATAATAAAG i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1835864 215 - 2187301 ATCTGACTTTCAAT-TTTTTTTCTTC-----ACATACTTAGGTCATCAAATGATTGCATTTTTCAATTTTTTACTAAATAAAATTGACACATTAACCTTGCCTTGAGAGAAAACAACCCTGG---GAAGCCTTAGCAGTAGTCTGAAAGGTAGTAT-GACCTTTTATACATTAATCACGATGCTCACACATTCTTTTAGTAAAATTCAATATAGCTGTAACAAAG i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=2481552.000000 s hg38.chr14_KI270725v1_random 1391 237 + 172810 A-----TATTTTA--TA----CTTTGA---TA--------AACATAAATTTTCAGAACTGAATTATAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACACCAA-GGT--CATG-----GTCAT-----TTTAATGAAAA--TAAGTAAATAAATAAACACTAGCA-------G-A-AAAATATGGTCAG-AAAAAAGGAGAAT-AAAACCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTACCAGTACACAGCTCTGCA s panTro5.chr3 201995911 237 - 202621043 A-----TATTTTA--TA----CTTTGA---TA--------AACATAAATTTTCAGAACTGAATTATAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACATCAA-GGT--CATG-----GTCAT-----TTTAATGAAAA--TAAGTAAATAAATAAACACTAGCA-------G-A-AAAATATGGTCAG-AAAAAAGGAGAAT-AAAATCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTACCAGTACACAGCTCTGCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204763949 237 - 205426864 A-----TATTTTA--TA----CTTTGA---TA--------AACATAAATTTTCAGAACTGAATTATAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACACCAA-GGT--CATG-----GTCAT-----TTTAATGAAAA--TAAGTAAATAAATAAACACTAGCA-------G-A-AAAATATGGTCAG-AAAAAAGGAGAAT-AAAATCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTACCAGTACACAGCTCTGCA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67581036 237 + 86207423 A-----TATTTTA--TA----CTTTGA---TA--------AACATAAATTTTCAGAACTGAATTATAGCTATCGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACACCAA-GGT--CATG-----GTCAT-----TTTAATGAAAA--TAAGTAAATAAATAAACACTAGCA-------G-A-AAAATATAGTCAG-AAAAAAGGAGAAT-AAAACCTGCATCCAAATTTCAGTTGATAATGGGCTATTTAATAACTATCAATACACAGCTCTGCA i nomLeu3.chr21 C 0 I 2167 s rheMac8.chr2 66063829 239 + 204787373 A-----AATTTTA--TA----GTTTAA---CA--------AACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATGCATTACTGA-TTTTAACTCTAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAGCATTAGCA-------G-A-AAAATATGGTCAGAAAAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i rheMac8.chr2 C 0 I 1 s macFas5.chr2 60995674 239 - 192460366 A-----AATTTTA--TA----GTTTAA---CA--------AACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATGCATTACTGA-TTTTAACTCTAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAGCATTAGCA-------G-A-AAAATATGGTCAGAAAAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACATAGCTCTGCA i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11107640 239 - 17224310 A-----AATTTTA--TA----GTTTAA---CA--------AACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATGCATTACTGA-TTTTAACTCTAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAGCATTAGCA-------G-A-AAAATATGGTCAGAAAAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17419824 239 - 41321030 A-----AATTTTA--TA----CTTTAA---CA--------AACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACTCTAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAGCATTAGCA-------G-A-AAAATATGGTCAGAAAAAAAGGAGAATAAAAACCTGCGTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64491299 239 - 101219884 A-----AATTTTA--TA----CTTTAA---TA--------AACATATATTTTCAGAACTGAATTGTAACTATTGCATTCTGAACGAATTTTCTGTATACATTACTGA-TTTTAGCACCAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAACATTAGCA-------GAA-AAAATATGGTCAGAAAAAAAGGAGAAT-AAAACCTGCATCTGAATTTCAGTTGATAATGGGCGATTTAATAACTATCAGTACACAGCTCTGCA i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 877265 239 - 924385 A-----AATTTTA--TA----CTTTAA---CA--------AACATACATTTTCAGAACTGAATTGTAACCATTGCATTCCAAATGAATTTTCTGTATACATTACTGA-TTTTAACTCTAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAGCATTAGCA-------G-A-AAAATATGGTCAGAAAAAAAGGAGAATAAAAACCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6718269 238 - 10587913 A-----AATTTTA--TA----CTTTAA---TA--------AACATACATTTTCAGAACTGAATTGTAACTATTGCATTCCAAATGAATTTTCTGTATACATTACCGA-TTTTAGCACCAA-GGT--CATG-----GTCAT-----TTTGATGAAAA--TAAGTAAATAAATAAACATTAGCA-------G-A-AAAATATGGTCAGAAAAAAAGGAGAAT-AGAACCTGCATCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i colAng1.NW_012114711v1 C 0 I 1 s calJac3.chr15 46053415 236 - 98464013 A-----TATTTTA--TA----CTTTAA---TA--------AACATAAATTTGTAGCACTTAATCGTAACTATGGCATTCCAAATGAATTTTCTGTATATATCACTGA-TTCTAACATAAA-GAT--CATG-----GTCAT-----ATTGATGAAAA--TAAGTAAATAAATAAATACTAGCA-------G-A-AAAATATAGTCAG--AAAAAGGAGAAT-AAAACCTCCCTCTGAATTTCAGTTGATAATGGGCTATTTAATAACTATCAGTACACAGCTCTGCA i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27725005 233 + 27742158 A-----TATGTTA--TA----CTTTAA---TA--------AACATAAATTTTTAGAACTTAATTGTAACTATGGCATTCCAAATGAATTTTCTGTATATATTACTGC-TTTTAACACCAA-GGT--CATG-----GTCAT-----ATTGATGAAAA--TAAGTAAATAACTAAGTACTAGCA-------G-A-AAAAT---GTCAG--AAAAAGGAGAAC-AAAACCTCCCTCTGAATTTCAGTTGATAATGGGTTATTTAATAGCTATCAGTACACAGCTCTGCA i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 262442 234 - 4835464 A-----TATGTTA--TG----CTTTAA---TA--------AACATAAATTTTTAGAACTTAATTGTAACTATGGCATTCCAAATGAATTTTCTGTGTATATTACTGATTTTTAACACCAA-GGT--CACG-----GTCAT-----ATTGATGAaaa--taagtaaataaataaataCTAGCA-------G-A-AAAAT---GTCAG--AAAAAGGAGAAC-AAAACCTCCCTCTGAATTTCAGTTGATAATGGTCTGTTTAATAGCTATCAGTACACAGCTCTGCA i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3721347 233 + 4093027 A-----TATTTTA--TA----CTTTAA---TA--------AACATAAATTTTTAGAACTTAATTGTAACTATGGCATTCCAAACGAATTTTCTGTATATATTACTGA-TTTTAACACCAA-GGT--CATG-----GTCAT-----ATTGATGAaaa--taagtaaataaataaataCTAGCA-------G-A-AAAAT---GTCAG--AAAAAGGAGAAC-AAAACCTCCCTCTGAATTTCAGTTGATAATGGGCTATTTAATAGCTATCAGTATACAGCTCTGCA i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11066166 234 + 30473821 AATAATTTTTTTACTTA----CTTTAT---TA---GTTTTAGCATAAATTCTCGGACCTGAATT---------GCATTCCAAATAAATTTTATGTGCACATTATTGA-TTCTAACACCAT-GGT--AATA-----GCCAT-----GTAGATGAAAA--TAAGTAAATAAATGAAAACTAACA---------C-AAAATAAAGTCAG---AAAAGGAGAAT-AAAATCTGCATCTGATTTTCAGGTGATAATGGACTAATTAA---CTATTGGTACACAGCTCTGCC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769269 233 - 149736546 A-----TTTGTTC--TT----CTTTGATTTTA--------AACATAACCTTTCAGAATTGAG-------AATCAGATGGTAAATAAATAGTATTTGT--ATCATTGA-CTTTCGAACCAA-AGTAACATGTAACAGTCATGTTCCATTCATGAAAAC-TAACAAAAGAAAGAAAAAGGAGCA-------G-AGAAAACGCTGTTGA---GAACAGTGAGG-AAAACCTTCAATTAAATTTAAGTTGGTTGTG-------TAACGCCTGCCAGCG---AGTTTTGTG i mm10.chr6 I 410 C 0 s canFam3.chr20 16599998 253 + 58134056 A-----TATTTTA--CATGTTCTTTAT---TA---ATTTAAACATAAATTTTCAGAACTCAATTATACCTATAGCATTCCAAATGAATTTTCTGTGTATGTCATTAA-TTTTAACACCAA-GGC--ACTG-----ATCAT-----TTTGacacacacacacacacacacacaAAAGTTAATAAATTTAAG-A-GAAATCTAGTCAA--GGAAAAAAGAAC-AGAGCCTGCAATTAAATTTTAGTTGATAATGGGCTATTTAATAACTAT-GTTATGCAGCTATGCA i canFam3.chr20 I 4 C 0 s dasNov3.JH563077 1836079 243 - 2187301 -AATAGTATTTTA--TA----TTTCCA---TATTAATTTAAACAAAAAGGTTCAGAACTGAAATATAAC--TTGTATCCCAAATGAATTTTCTATGTAAGTTATTGA-TTTTAACATCAACAGT--GATG-----ATTAT-----TTTGTCAAAAA--TAACTAAATAAA----AACAAGAA-------G-G-AAAATTCAATCAG--AAAAAGGAGAAT-AAAACCTGCATTGAAATTTCAGCTGATAATGTGCTATTTAACAACTATGGATACACAGCTATGAA i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=3865054.000000 s hg38.chr14_KI270725v1_random 1628 328 + 172810 GG---GAAAAAGGCAATAATTCATGTTAGGTATATCCAGTAACTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTATATAATATGTTTAAAATTCTCTTTTTAGTATTCAGATTTTAATGAACTGCAGATCACTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCAAGT--AAATTGGGTTAAAATATTGCATTTTTATTGTTAGCTTAATAGCTTAAAGAGATATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT s panTro5.chr3 201996148 328 - 202621043 GG---GAAAAAGGCAATAATTCATGTTAGGTATATCCAGTACCTAATGATAATTAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATATGTTTAAAATTCTCTTTTTAGTATTCAGATTTTAATGAACTGCAGATCACTGCAATTCTTCATGTTAAATCGCATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGATATTAAACGTTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764186 328 - 205426864 GG---GAAAAAGGCAATAATTCATGTTAGGTATATCCAGTACCTAATGATAATTAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATATGTTTAAAATTCTCTTTTTAGTATTCAGATTTTAATGAACTGCAGATCACTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGATATTAAACGTTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66064069 328 + 204787373 GG---AAAAAAGGCAATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATATGTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i rheMac8.chr2 I 1 C 0 s macFas5.chr2 60995914 328 - 192460366 GG---AAAAAAGGCAATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATATGTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11107880 328 - 17224310 GG---AAAAAAGGCAATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATATGTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17420064 328 - 41321030 GG---AAAAAAGGCAATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAATA-TTTCTTTATGGAAAAGAGGTAAACGAACTTCTTTACATAATATGTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTATCTTAATAGCTTAAAGAGGTATTAAATATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64491539 328 - 101219884 GG---AAAAAAGGCAATAATTCATGTCAGGTGTACCCAGCACCTAATGATAATCAACATGCTTTAAGGAAAATG-AAGATAACA-TTTCTTTATGGAAAAGAGGTAAACGAATTTCTTTACATAATGTGTTTAAAATTCTCTTTCCAGTATTCAGATTTTAACGAAATGCAGATCACTGCAATTCTTCATGTTAAATCACGTCTGAGGTTTTTCCTTAATTGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 877505 328 - 924385 GG---AAAAAAGGCAATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACGTGCTTTAAGGAAAATG-AAGATCATA-TTTCTTTATGGAAAAGAGGTAAATGAACTTCTTTACATAATATGTTTAAAATTCTCTTTCCAGGATTCAGATTTTAATGAAATTCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAATATTTAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6718508 325 - 10587913 GGA--AAAAAAGGCAATAATTCATGTTAGGTGTACCCAGCACCTAATGATAATCAACATGCT----GGAAAATG-AAGATAATA-TTTCTTTATGAAAAAAAGGTAAATGAACTTCTTTACATAATATGTTTAAAATTCTCTTTCCAGTATTCAGATTTTAATGAAATGCAGATCACTGCAATTCTTCATGTTAAATCACATCTGAAATTGTTCCCTAATTGAGT--AAATTGGGTTAAAATATTGTATTTTTGTTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATATAATTATTAACCTTGACATGGAAGAATTGGAGAGATTTCTTAGAT i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46053652 324 - 98464013 GG---AAAAAAGGCAATAATTTATGTTAGGTATACCTAGCACCTGATGATAATCAACATGCTTTAAGGGTAAGG-AAGTTAATA-TTTCTTTATGGAAAAG----GAACAAACTTCTTCACATACTACAGTTAAAATTCTCTTTCTAGTATTCAAATTTTAATGGCATGCAGATCGCTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCAAGT--AAATTGGGTTAAAATGTTGCATTTTTATTGCTAGCTTAACAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATGTCTTAGCT i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27725239 326 + 27742158 GG---AAAAAAGGCAATAATTTAAGTTAGGTATACCTAGCACCTAATGATAATCAACATGCTTTAAGGATAATG-AAGATAATA-TTTCTTTATAGAAAAGAGGTAAAGAAACTTCTTAACATAATATGATTAAAATTCTCTT--CAGTATTCAAATTTTAATGGAATGCAGATTGCTGCAATTCTTCATGTTAAATCACATCTGAGATTGTTCGTTAATTGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGTTTAAAGAGGTATTAAACATTTAATTATTAACCTCGACATGAAAGAATTGGAGAGATGTCTTAACT i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 262677 328 - 4835464 GG---AAAAAAGGCAATAATTTATGTTAGGTATACCTAGCACCTAATGATAATCAACATGCTTTAAGGATAATG-AAGATAATA-TTTCTTTATAGAAAAGAGGTAAACAAACTTCTTCACATAATATGGTTAAAATTCTCTTTTTAACATTCAAATTTTAATGGAATGCAGATCGCTGCTATTTTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTCGACATGAAAGAATTGGAGAGATGTCTTAACT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3721581 328 + 4093027 GG---AAAAAAGGCAATAATTTATGTTAGGTATACCTAGCACCTAATGATAATCAACATGCTTTAAGGATAATG-AAGATAATA-TTTCTTTATAGAAAAGAGGTAAACAAACTTCTTCACATAATATGGTTAAAATTCTCTTTCTAGTATTCAAATTTTAATGGAATGCAGATCGCTGCAATTCTTCATGTTAAATCACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATGTCTTAACT i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11066400 328 + 30473821 GG---GAACAAGGCAATAATTCATGTTAGGTGTATTCAGCACCTAATGAATATCAACATGCTTTAAGGAAAATG-AAGATGATA-TTCCTTTATTGAAAAGAACTAAATGAACTTCTTTACATAATACATTTAAAATTCTCTTTCTAGTACTCAAATTTTAATGAAATGCAGAGCACTGCAATTCTTCATGTTAAATAACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCACTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATAGGAGAGATTTCTTAGAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769502 321 - 149736546 --C--AGGAAATGGTAGAAGCCATGTCAGGTGCACACAGTGCTTCCCACTAGGCAATGTACACCAAGGGAAATG-AAGACACTA-TTTGGTTATTGAAAAGGGTCAAATGGGCTTCTT------GCATATTTGAAAGTCTCTTTCTAGCACTCAGATGTTCATGAAATGCAGATCAGTGCAATTCTTCATGTTAAATAACATCTGGGATTGTTCCTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTGCTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGAAGAGATTTCTTGGAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16600251 329 + 58134056 --GATTAAAAATGCAATGATTCATAGTAGGTATATCCAACATCTAATGATAATCAACATGCTTTTTGGGAAATG-AGGATAATA-CTCCCTTATTGAAAAGAGTTAAATGAACTTCTTCACATAATATGTTTAAAATTCTCTTTCTAGTGTGTAGATTTTAATGAAATGCAGATCACTGCAATTCTTCATGTTAAATAACATCTGGGATTGTTCTTTAATCGAGT--AAATTGGGTTAAAATATTGCATTTTTATTACTAGCTTAATAGCTTAAAGAGGTATTAAACATTTAATTATTAACCTTGACATGAAAGAATTGGAGAGATTTCACTGAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836322 329 - 2187301 GG---AAAAAATGCAATAATTCATGTTAGATATAATCAGCATATAATGATAATTAATATGTTTTAAGGGAAATGTAAGATAATAGGCCCTTTATTGAAAATAAGTCAATGAAATTCTTTATATAATATGTTTAAAAT--TCTGTCTAATACTCATATTTTAATGAAATGTAGAAAGCTGCAATT-TTCATGTTAAATAACATCTGGGATTGTTCTTTAATTAGATAAAAATTTGGTTAAAATATTGCATTTTTACTGATAGCTTAATAGCTTAAAGAGatattaaatatttaattattaaCCTTGACATGAAAGAATTGGAGAGATTTCTTAGAT i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I e nomLeu3.chr21 67581273 2167 + 86207423 I a score=2937508.000000 s hg38.chr14_KI270725v1_random 1956 264 + 172810 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTGGGATAAAGCAAATCTAATGAGCTGTCTTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAACTCATTATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa s panTro5.chr3 201996476 264 - 202621043 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATTGTAGGATAAAGCAAATCTAACGAGCTATCCTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATAGAGCATACAT-----------ATATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAGATGCTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAGTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764514 264 - 205426864 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTATCTTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATAGAGCATACAT-----------ATATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAGATGCTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAGTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67583440 264 + 86207423 GATTTAAGGATTTGAAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATATAACGAGCTATCTTG-AAATGGGCATCTGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGAAATCATTCATAGAAGAACAGATATTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAACTCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa i nomLeu3.chr21 I 2167 C 0 s rheMac8.chr2 66064397 260 + 204787373 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTGTCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGC------T-TAGCCTAGTAatttactcattc-aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60996242 264 - 192460366 GATTTGAGGATTTGTGAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTGTCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11108208 264 - 17224310 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTGTCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17420392 264 - 41321030 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTATCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGTCTAATAATATAGCATACAT-----------TTATATCCAAAGTTACTTAAGGGAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-TAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGCAatttactcattc-aa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64491867 263 - 101219884 GATTTGAGGATTTGTAAGTTCTCTCTTCTGAATGAAGTTTATACGTTAGGATAAAGCAAATCTAATGAGCTATCTTG-AAATGTGCATTTGAC--TAATTGAAAGACACTAATAATATAGCATACAT-----------ACATATCCAATGTTACTTAAGGAAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGGATGCTAAATATTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc--a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 877833 264 - 924385 GATTTGAAGATTTGTAAGTTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAACGAGCTATCTTG-AAATGGGCATTGGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGGAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGTATGCTAAATACTAATAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAGCCTAGTAatttactcattc-aa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6718833 260 - 10587913 GATTTGAGGATTTGTAAATTCTCTCTTCTGAGTGAAGTTTATATGTTAGGATAAAGCAAATCTAATGAGCTATCTTG-AAATGGGCATTTGAC--TAATTGAAAGAGACTAATAATATAGCATACAT-----------ATATATCCAACGTTACTTAAGGAAATCATTCATAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGGATGCTAAATATTAATAAAATCATCATAA---------CTGAATAAGAGG------T-TAGCCTAGTAatttactcattc-aa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46053976 262 - 98464013 GATTTAAGGATTTGCAAGTTCTCTCTTCTGAGTGAAGTTTGTATGTTAGGATAAAACAAATCTAACAATATATCTTG-AAATAGGCATTTGAC--TAATTGAAAGATACAAATAAAATAACATACAT-----------ATACACCAAACATTACTTTA--AAATCATTCAGAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAATCACCATAA---------CTGAATAACAGAC--AGGT-TAGTCTAGTGattcactcattc-ac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725565 263 + 27742158 GATTTAAGGATTTGCAAGTTCTCTCTTCTGAGTGAAGTTCTTATGTTAGGGTAAAACAAATCTAACAATATATCTTG-AAATGGGCATTTGAC--TAATTGAAAGAGACTAATAAAATAACATACAT-----------ATACATCAAACATTACTTAA--AAATCATTCACAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAACAAAATCATCATAA---------CTGAATAACAGAT--AGGT-TAACCTAGTGattcactcattcaaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263005 263 - 4835464 GATTTAAGGATTTGCAAGTTCTCTCTTCTGAGTGAAGTTCTTATGTTAGGGTAAAACAAATCTAACAATATATCTTG-AAATGGTCATTTGAC--TAATTGAAAGAGACTAATAAAATAGCATACAT-----------ATACATCAAACATTACTTAA--AAATCATTCAGAGAAGAATAGATGTTTTATTTTAAAA--AT-CAACGAATGGATGTTAAATATTAACAAAATCATCATAA---------CTGAATAACACAT--TGGT-TAACCTAGTGattcactcattcaaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3721909 263 + 4093027 GATTTAAGGATTTACAAGTTCTCTCTTCTGAGTGAAGTTCTTATGTTAGGATAAAACAAATCTAACAATATATCTTG-AAATGGGCATTTGAC--TAATTGAAAGAGACTAATAAAATAGCATACAT-----------ATACATTAAACATTACTTAA--AAATCATTCAGAGAAGAATAGGTGTTTTATTTTAAAA--AT-CAACTAATGGATGTTAAATATTAATAAAATCATCATAA---------CTGAGTAACAGAT--AGGT-TAACCTAGTGattcactcattcaaa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11066728 277 + 30473821 GATTTAAGGATTTAAAAGTTCTCTCTTCTGAGTGAAGTTCATATGCTAGGATAAGGCAGATCTAACCAGCTATCTTG-AAATGGGCATTTGGCTTTAATTGAAAGAAACTAATAATACAGCATACAT-----------ATATCCCAAACGTTACTTGAGGGAATCATTTGGAGGAGAGTAGATGTCTGATCAAACAA--AT-CAAGTAATGGGTTTTAAATATTAGTGAAATCATTATTATGATTTATTCTAAACAATAAATACAGGT-CAGGTTAGTGattcattcacag-aa i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45769823 255 - 149736546 GATTTAAGGATTTAAAAGTTCTCTCTTCTGAGTGAAATTCATATGCC-TGATAAAGCAGATCTAACTAGTTATCTTGAAAAAAAGCATTTTACTTTAATTGAAATAAAGTAATAATAATGAAT------------------------AAGTTGCTTGAAGACATCATTCACAGAAGAATGAAAGTCTTACAGTAAAGGCAA-CTGCTGACAGATGTTAAAATGCCCAGAGACTGTCACTA---------CTAAAGAATAATT--AGGT-CAAACTAGCAATTTCTTTATAT-AA i mm10.chr6 C 0 I 2487 s canFam3.chr20 16600580 274 + 58134056 GATTTAAGGATTTCAAAATTCTCTCTTCTGAGTTAAGTTCATATGTAAGGATGAGATAGCTCTAACTAGCCATCCTG-AAATGGGGGTTTGACCTTAATTGAAAGAAATGCATAACATACCATGTAT----ACAAATGATATGTATAACATTAGTTGAGCAAATCATTCATGGAGGAATATGTGTTTTATATGAAAAATAT-CAAGTAATGGATGTTAGATATTAGAAAAATC--CATGA---------CTAAACAACAGAA--AAATATAGCCTGATTattccttcattc-ag i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836651 279 - 2187301 TATTCAAGAACTTAAAAGTCTTTTCTTCTGAATGAAGTTCATATGCTACAGTAAAGTAGATCTAACCAACCATCCTG-AAATTGGTAGTGGACTTTAATTGAAAGAAATTAATAATACAGCCTAGATTAGAGAGAGAGAGATATCCAACATTATTTGAGGGAATCAATCAGAGAGGAAAAGATCTTTTACAGGAAAA--ATACCAATTATGAGTGCTATATATTAATAAAATTACAATTA---------CTAATCAACAAAC--AGGTCTAGCCTGCTGatccatccagtc-aa i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=6270306.000000 s hg38.chr14_KI270725v1_random 2220 620 + 172810 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcactagcaagacagcagggaaTTGGTTCTTATCAAACTTAT-ATTCTACTAGAAAT-----AGATGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAATAGGCAATATAGGCTAtggtatgctgacaaatgtttaataaccagctctctaaaagg-----aa--------caaagcaagcc------gagtt------tttgccattttctgtgatgaaaacattcccaacatgactaatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagctgttataagacaacattggcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaaaaaccag----aaaaagtcgtgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaagaacaagaag---gccaataagtctggggtgtactacataaaaggaggatatacaa-tg s panTro5.chr3 201996740 623 - 202621043 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcactagcaagacagcagggaattggttcttatcaaacttat-attctactagaaat-----agaTGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctctctaaaagg-----aa--------caaagcaagcc------gagtt------tttgccattttctgtgatgaaaacattcccaacatgactgatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagctgttataagacagcattggcacacacactATGACAAGATTactttaaattggatactc-agaaaaggcctctctgggaaactgacactt--aaactaagatctgaaaaaccag----aaaaagtcgtgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctggattgtcggaggaacaagaagaaggccaataagtctggggtgtactacataaaaggagggtatacaa-tg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204764778 623 - 205426864 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcactagcaagacagcagggaattggttcttatcaaacttat-attctactagaaat-----agaTGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctctctaaaagg-----aa--------caaagcaagcc------gagtt------tttgccattttctgtgatgaaaacattcccaacatgactgatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagctgttataagacagcattggcacacacactATGACAAGATTactttaaattggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaaaaaccag----aaaaagtcgtgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctggattgtcggaggaacaagaagaaggccaataagtctggggtgtactacataaaaggagggtatacaa-tg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67583704 633 + 86207423 aaaatatttactgtacattcatgatgtggaaagcagtattctaggcattgggaagacggcagggaattggttcttatcaaacttat-attctactagaaat-----agaTGCATATGT-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTAGCAAGAA-----ATATAAAGAATATAAAGAGTCACATATTAACAGGCAATATAGGcaacggtacgctgacaaatgtttaataaccagctttctaaaggg-----aa--------caaagcaatcc----ctgagttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaaatatac-taatatgacatcactcaatac----atagttggaaagag--gtgta--ccataagccctagtgagctgttttaagacagcatcggcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacacttagaaactaagatctgaaaaaacag----aaaaagtcatgtgtga-aatcttgaggcattacaccctgaagagggataacagct-----a-----aagttcccaaaccagtgcaagcctggattgttgaaggaaaaagaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66064657 635 + 204787373 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaaTTGGTT-TTATAAAACCTAT-ATTCCGCCAGAAAT-----AGATGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagccagcc----ctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagttgttgtaagacagcattggcacacacactATGACAAGATTactttaagttggatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60996506 635 - 192460366 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaattggtt-ttataaaacctat-attccgccagaaat-----agatgcatatga-at--agagttttc----agaagagaaattaaaggttataataagtagtataaagagaatataaagagtcacatattaataggcaatataggcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagccagcc----ctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagttgttgtaagacagcattggcacacacactatgacaagattactttaagttggatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11108472 635 - 17224310 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaattggtt-ttataaaacctat-attccgccagaaat-----agatgcatatga-at--agagttttc----agaagagaaattaaaggttgtaataagtagtataaagagaatataaagagtcacatattaataggcaatataggcaatggtatgctgacaaatgtttaacaaccagctgtctaaaagg-----aa--------caaagccagcc----ctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagttgttgtaagacagcattggcacacacactatgacaagattactttaagttggatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17420656 635 - 41321030 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaaTTGTTT-TTATAAAACCTAT-ATTCCGCCAGAAAT-----AGATGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagccagcc----gtgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagttgttgtaagacagcattggcacacACAGTATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492130 635 - 101219884 aaaatatttactgtacatttgtgatgtggaaagcagtattccaggcattgggaagacagtcgggaattggtt-ttataaaacctat-attctaccagaaat-----agatgcatatga-at--agag-tttc----agaagagaaattaaaggttgtaataagtagtataaagagaatataaagagtcacatattaagaggcaatataggcaatggtatgctgacaaatgtttaataaccaactgtctaaaagg-----aa--------caaagccagcc----ctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagttgttgtaagacagcattggcacacacactatgacaagattactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag---aaaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaagccaataagtctggggtgtactacgtaaaaggaggatatacaa-tg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878097 635 - 924385 aaaatatttactgtacatttgtgatgtggaaagtagtattctaggcattgggaagacagtcgggaaTTGGTT-TTATAAAACCTAT-ATTCCGCCAGAAAT-----AGATGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaaggtttaataaccagctgtctaaaagg-----aa--------caaagccagcc----ctgggttgcagtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaagtctac-taatatggcatcactcaatac----atagttggaaagac--gtata--ccataagccctagtgagttgttgtaagacagcattggcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719093 634 - 10587913 aaaatatttactgtacatttgtgatgtggaaagcagtattctaggcattgggaaAATAATCTGGAATTGGTT-TTATAAAACCTGT-ATTCTACCAGAAAT-----AGATGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATTAAAGGTTGTAATAAGTAGTATAAAGAGAATATAAAGAGTCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaataaccagctgtctaaaagg-----aa--------caaagccagcc----ctgagttgctgtgtttgccattttctgtgatgaaaacattcccaacatgactgatttaaatctac-taatatggcatcactcaatac----atagttggaaagag--gtata--ccataagccctagtgagctgttataagacagcatcagcacacacactATGACAAGATTactttaagttggatactc-agaaaaggcctctctgggaaagtgacactt---aactaagatctgaataaccag----aaaaaatcatgtgtga-aatcttgaggaattacaccctgaagagggaaaacagct-----a-----aagttcccaaaccagtgcaagcctggattgttggaggaataggaagaaggccaataagtctggggtgtactacataaaaggaggatatacaa-tg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054238 636 - 98464013 aaaatatttattgtacatatgtgatgtggaaagaagtattctaggcactgggaagacagcagggaaTCAGTTCTTATAAAATTTATAATTCTACCAGAAAC-----AGACGCATATGA-AT--AGAGTTTTC----AGAAGAGAAATAAAAGATTGTAATAA-TAGTATGAAGAGAATAT--AGAGTCACATATTAATAGGCAATATAGGcagtggcatgctaacaaacgtttaattaccagctctcttaaaaggaacaaa--------caaagcaagcc----ctgggttgcagtatttgccattttctgtgatgaaaacattcccaacatgactgatttcagtctac-tagcatgacatcactcaatac----atagatgcaatgag--gtatg--ccatcagccctagtgagctgttacaagacagctctggcacacATGCTATGATAAGATTactttaagttgcatactc-agaaaaggcctctctgggaaactgacactt--aaactaagatctgaataaccag----aaaaagtcacatgtga-aatcttgaggcattacaccctgaacagagaaaacagat-----a-----aagtccccaaactaatacaagcttggattgttggagaaacagcaag---gccagtaagtctggactatactacacaataagaggatataaaa-tg i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27725828 636 + 27742158 aaaatatttattgtaaatctgtgatgtggaaagaagtattctaagcactgcaaaggcagtagagaaTCAGTTCTTATAAAATTTATAATTCTACCAGAAAC-----AGATGCATATGA-AT----AGTTTTC----AGAAGAGAAATAAAAGGTTGTAATAA-TAGTATGAAGAGAATATAAAGAATCACATATTCATAGACAATATAGGcaatggtatgctgacaaatgtttaattaccagctctcttaaaaggaacaaa--------caaagcaagcc----ctgggttgcagtatttgccattttctgtgatgaaaacattcccaacatgactgatttcagtccac-taatatgatatcactcaatat----atagatggaatgag--gtata--ccatcagccatagtgagctgttacaagatggctccggcatacACGCTATGATAAGATTactttaagttgcatactc-agaaaaggcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaagtcacatgcaa-aatcttcaggcattacaccctgaacagagaaattggat-----a-----aagtccccaaaccagtacaagcctggattgttagaggaacagcaag---gccagtaagtctggactatactacacaataagaggatataaaa-cg i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263268 636 - 4835464 aaaatatttattgtaaatctgtgatgtggagagaagtattctaggcactgggaagacagtagggaaTCAGTTCTTATAAAATTTATAATTCTACGAGAAAC-----AGATGCATATGA-AT----AGTTTTC----AGAAGAGAAATAAAAGCTTGTAATAA-CAGTATGAAGAGAATATAAAGAACCACATATTAATAGGCAATATAGGcaatggtatgctgacaaatgtttaattaccagctctcttaaaaggaacaaa--------caaagcaagcc----ttgggttgcagtatttgccattttctgtgctgaaaatgttcccaacatgactgatttcagtctac-taatatgacatcactcaatac----ataggtggaatgag--gtata--ccatcagccctagtgagctgttataagacagctccggcatacACGCTATGATAAGATTactttaagttgtatactc-agaaaaagcctctctgggaaagtgacactt--aaactaagatctgaataaccag----aaaaagtcacatgtga-aatattcaggcattacatcctgaacagagaaaacagat-----a-----aagtccctaaaccagtacaagcctggattgttggaggaacagcaag---gccaataagtctggactatactacacaataagaggatataaaa-tg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722172 633 + 4093027 aaaatatttattgtaaatctgtgatgtggaaagaagtattctagtcactggaaagacagtaggaaaTCAGTTCTTATAAAATGTATAATTCTACCAGAAAC-----AGATGTATATGA-AT----AGTTTTC----AGAAGAGAAATAAAAGGTTGTAATAA-TAGTATGAAGAGAATGTAAAGCATCACATATTAATAGGCAATAta-------gtatgctgacaaatgtttaattaccagctctcttaaaaggaacaaa--------caaagcaagcc----ctgggttgcagtatttgccattttctgtgatgaaaacattcccaacatgactgatttcagtctac-taatatgacctcattccatctactaatagatggaatgag--gtata--ccatcagccctagtgagctgttataagacagatccagcatacACGCTATGATAAGATTactttaagttgcatactc-agaaaaggcctctctgggaaagtgacgctt--aaactaagatctgaataaccag----aaaaagtcacatgtga-aatcttgaggcattataccctgaacagagaaaatagat-----a-----aagtccccaaaccagtagaagcctggattgttggaggaacagcaag---gccaataagtctggactatactacacaataagaggatataaaa-tg i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11067005 643 + 30473821 aaaacatttactgtatacctgtgatatagaaagcagtattccaggcactgaaaagaggacagtgaacaaTTTCTCACAGCCTTTAT-CTTCTACCAGAAAT-----AGATGCATATAATGC--AAATTTTTA----AGGAGACAAGTAAAAGGTGTTGATAAATAGCACAAAGGGAATAAAAAGTGTTACGTGTTAAT-GGCAATATATGcagtggcacgtgggtaagtgtttaataacccgttctctgaaaca-----ga--------caaagccagccagccctggattgcagttcttgccattgtccattgtgtaaacgctctgaacgtgactgccttcagtctac-cagtatgacatcattgaatac----gtagctgcagacag--gtgca--ccagtagacccggtgagc-gttctaagatgtcaccatcacacACCCTATGGCCAGgctactttacattgaagagtc-aggcaagaccgctctggg-aagtgacactt--agactagtgtctgaataactag----agaaaattacatg-gg-gagctagagaagctatattctgagcagggaaaacagct-----agtgtgaaatcccaaagccagtataagactgaattgttcaagaaagaaaaagtgggtctgtgagcctagaatacaacaaacaaaggtaggatataaaagtg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16600854 626 + 58134056 caaatatttgctgtacacctgtcatgtggaaagtgcttttctagacactgagaagaaagcagtgaatcagttctcataacgctcat-attctacaagaaattgacaagacacatataa-atacagatttttt----aaaagacaaat----gattttaataaatagtacaaagaata---aaagagttatacattgttaggtgatgtaggcaatggtatgttggtaaatgttcaaaaatcaattctcaaaaaaa-----aa--------aaa------tc----tctggttatagtgtttgccattctctgttgtgtaaataatcccagcatggctgatttcaagccatggaacatgacattgctgaatag----agaattgggaagagatgtata--ccatgaactctagtgagctgttctaagagggctccagcatac----catgataaggctaagttaagttgaat----------aggtctccctgggaaaatgacattt--aaactaaggcctgaataaccag---aaaaaaatcatgggtgaggaactatataagccatattctgagcagagaaaacagctcgtaaa-----aagtcccaaaggcaatacaagcttggactat-ggaggaacaaaaagacggccagtgaatctgaagtgtaacaagcaaacggaggatgaatca-tg i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1836930 623 - 2187301 caaatatttaccatatttctgtgatgtgcagagtaccacactaggcactgggaaaa--gcagtgaattggctcctgaaaaactaat-cgtctactggaaat-----agacatataCAA-AT--GCAGGTTTTCTAAACAAAGGAAATAAAAGTTTGTGATAAATAGTACAGAGAGAATAAAAAGAGTTTCATATTAGGAGGTGGTATAGG-----------------ACGTTTTACAACTAGCTTTCAACAAaa-----taaaacaacccaaataaagcc----ctgagctacagcatttgccattttccatagtgtaaatatttccaccatgactgatttcatgctac-caatacagcatcactgaatat----gaacttgggaagag--acatactccatcagctttagcaagctggttcaagccagctccagcacac---cactgATAAAGCTCCATTATGATGTACAgttaaggacagatctttcagggaaagtgttattt--aagctaatatctgaaggggcaggaaaaaaaaaacatgtgc-a-gagctagaggatctgtattctgggcagagaaaattact-----aatgcaaagtcccaaagccaggacaagcttagattgttggaggaatcaaaagaaaatctgtgagtctggagtat---aaacaagcaaag------------ i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45770078 2487 - 149736546 I e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=1285804.000000 s hg38.chr14_KI270725v1_random 2840 118 + 172810 agat---------------tagaaaaacagtcaaagcttttcatgcagaacttcataatatagagtatgaaatttggcaaa----------gatgtcactggaaggtttGTGAATCATTTTAATTGTATTGATTAAAACTT-TT--- s panTro5.chr3 201997363 118 - 202621043 agat---------------tagaaaaacagtcaaagcttttcatgcagaacttcgtaatatagggtatgaaatttggcaaa----------gatgtcactggaaggtttGTGAATCATGTTAATTGTATTGATTAAAACTT-TT--- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765401 118 - 205426864 agat---------------tagaaaaacagtcaaagcttttcatgcagaacttcgtaatatagggtatgaaatttggcaaa----------gatgtcactggaaggtttGTGAATCATGTTAATTGTATTGATTAAAACTT-TT--- i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584337 119 + 86207423 ggat---------------tagaaaaatagtcaaagcttttcatgcagaacttcgtaatatagggtatgaaatttggcaag----------gatgtcactggaaggtttGTGAATCATGTTAATTGTATTAATTAAAACTTACT--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065292 119 + 204787373 ggat---------------tagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997141 119 - 192460366 ggat---------------tagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109107 119 - 17224310 ggat---------------tagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcACG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421291 119 - 41321030 ggat---------------tagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTAATTGTATTAATTAAAACTCATT--- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492765 119 - 101219884 ggat---------------tagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCGTGTTAATTGTATTTATTAAAACTCATT--- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878732 119 - 924385 ggat---------------tagaaaaacagtcaaagattttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTCACTGGAAGTTTTGTGAATCATGTTCATTGTATTTATTAAAACTCATT--- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719727 119 - 10587913 ggat---------------tagaaaaacagtcaaagattttcatgcagaacttcgtaatatagggtatgaaatttggcAAG----------GATGTCACTGCAAGTTTTGTGAATCATGTTAATTGTATTTATTAAAACTCATT--- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054874 118 - 98464013 ggat---------------tataaaaacagtcaaagtttttcatgcagaactttgtaatacagggtataaaatctggcAAG----------GATTTTATTAGAAGTTTTGTAAATCATGTTAATTGTATT-ATTACATCTCATT--- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726464 118 + 27742158 ggat---------------tataaaaacagtcaaagtttttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTTATTAGAAGTTTTGTGAATCATGTTAATTATATT-ATTACAACTCATT--- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 263904 118 - 4835464 ggac---------------tataaaaacagtcaaagtttttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTTATTAGAAGTTTTGTGAATCATGTTAATTGTATT-ATTACAACTCATT--- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722805 118 + 4093027 ggat---------------tataaaaacagtcaaagtttttcatgcagaactttgtaatatagggtatgaaatttggcAAG----------GATGTTATTAGAAGTTTTGTGAATCATGTTAATTGTATT-ATTACAACTCATT--- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11067648 133 + 30473821 agatagaaatgcagccggatagaaaagcagccgaaggctttcatgcagAACTTTGTAACATAGGGC-TAGAAGTGGGCAGA----------GATGGCATTGGAAGGTTTGTGAATCGTGTTAATTGTCTTAGTTAGAACTAAAG--- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772565 119 - 149736546 AGGC---------------CAGAGAGGAAGCCAACGACTTTCATGCAGAACATTGTGATATAGGATGTGAAATTTGCCTGA----------GATATTCCTGCAAAGATTATGAATCATATTAATTCCCTTGATTAACATTTATT--- i mm10.chr6 I 2487 C 0 s canFam3.chr20 16601480 113 + 58134056 aggt---------------tggaaaggcagccagag-ccttcacagggaaccttgtaatatagGGTATATAATATGGCTGG----------GATGCTACTAGATGATCTATTAATCAT----ATTGTAGTGATTAAAACTCTT---- i canFam3.chr20 C 0 I 205 s dasNov3.JH563077 1837553 118 - 2187301 --------------------agagaAACA---------TTTCATGTAGAACTATGTAATACATGGTATAGAATTTGACTGGGATATAATTAGATATTATTAGAAAGTTTATTAATCATATCAATTTTCTTGATTATATATTATTATT i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=1884178.000000 s hg38.chr14_KI270725v1_random 2958 169 + 172810 GCATTTACTCTATGCTGTCTATAGTAAAGC--AAAAAGCTATTA---CA-GAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCTCAACATATTATTAC-AATTATGGCATCCAA s panTro5.chr3 201997481 170 - 202621043 GCATTTACTCTATGCTGTCTATAGTAAAAC--AAAAAGCTATTA---CAAGAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCTCAACATATTATTAC-AATTATGGCATCCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765519 169 - 205426864 GCATTTACTCTATGCTGTCTATAGTAAAAC--AAAAAGCTATTA---CA-GAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCTCAACATATTATTAC-AATTATGGCATCCAA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584456 167 + 86207423 GCATTTACTC-ATGCTGTCCATAGTAAAGC--AAAAAGCTATTA---CA-GAAGGAGGAAAAGA-CTTGGCTTACTGATGATAAAAAGAATAGGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATCCCAACATACTATTAC-AATTATGGCATCCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065411 169 + 204787373 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTA---CA-GGAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997260 169 - 192460366 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTA---CA-GGAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109226 169 - 17224310 GTATTTACTCTATACTTTCCATAGTAAAGC--AAAAAGCTATTA---CA-GGAGGAGGAACAGACCTTGGCTTACTGATGATAAGAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421410 169 - 41321030 ATATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTA---CA-GAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64492884 169 - 101219884 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTA---CA-GAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 878851 169 - 924385 GTATTTACTCTATGCTTTTCATAGTAAAGC--AAAAAGCTATTA---CA-GAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTATTAC-AATTATGGCATCCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6719846 169 - 10587913 GTATTTACTCTATGCTTTCCATAGTAAAGC--AAAAAGCTATTA---GA-GAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAAAAATCCTTAAAAACTAGGTTGAATAAGAGGTTAGAATTAGTAGGCATGCCAACATATTGTTAC-AATTATGGCATCCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46054992 169 - 98464013 GCATTTACTCTATGCTGTCCACAGTAAAGC--AGAAAGCTGCTA---CA-AAAGGAGGAACAGACCTTGGCTTACTGATGATAAAAAGAATATGAAACATTTTTTAAAAAGCAAGTCGAATAATAGATTAGAATTAGTAGGCATGTCAACCTATTATTAG-CATTATGGCATCCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726582 169 + 27742158 GCATTTACTCTCTGCTGTCCACATTAAAGC--AGAAAGCTATTA---CA-AAAGGAGGAACAGACCTTAGCTTACTGATGATAAAAAGCATATGAAAAAGTTTTTTAAATCTATGTTGAATAAGAGGTTAGAATTAGTAGGCATGTCAACCTATTATTAC-TATTATGGCATCCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264022 169 - 4835464 GCATTTACTCTATGCTGTCTACAGTAAAGC--AGAAAGCTGTTA---CA-AAAGGAGAAACAGGCCTTGGCTTACTGATGATAAAAAGAATATGAACAAAATTTTAAAATCTAGGTTGAATAAGAGATTAGAATTAGTAGGCATGTTAACCTATTATTAC-TATTATGGCATCCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3722923 169 + 4093027 GCATTTACTCTGTGCTGTCCACAGTAAAGC--AGAAAGCTGTTA---CA-AAAGGAGGAACAGATTTTGGCTTACTGATCATAAAAAGAATATGAAAAAATTTttaaaatctagattgaataagaagttagaattagTAGGCATATCAACCTATTATTAC-TGTTATGGCATCTAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11067781 172 + 30473821 CCATTTAATCTGTGCTATCCATAATGAAGG--AAAATGTTATTACTTCA-CAAGGCAGGACAAGCCTTGGCTAAATGATTAT-AGGAGAACATAAGAAAATGCTTGGAAAGTAGGTTGAAAAAAATTTAAGATTTAGCAAGAGTGTGACCATTGTATTCCTAATTATGGAATCCAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772684 169 - 149736546 GCATTTAGTCCACGCTGTCCCCTGTGCAGT--AACATGTTATTA---CT-GAAGGA-ACACAGCCATAAGCTCACAGAGCATAAGAATAATAGGAGAAAACTCCCGGGAACTGGATTGAATAAAAGCTCAGAGTTGAAGAGCATGTCAACATACTATTACTAATTATAGCATCCAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16601798 169 + 58134056 GTATTTACTCTGTGCTGTTCATAGTAAGGTAAAAAAAGTTATTG---CA-GAATGAAGGACAGGCCTTGGCTCTTTG-TGATAGGACAAACATTAGAAAATATTTGGGAACTAGGTTAAATAAAACTTTGGAATTAGTAAG--TGTCAACATAATATTACTAATTGTGGCATTCAA i canFam3.chr20 I 205 C 0 s dasNov3.JH563077 1837671 165 - 2187301 ACATTGACTTTGTGCTGTTCACAGTAAAGA--AA----TTATTA---CA-GAAGGAGAGAGAGACCTTGACTGGCTAATGATAGGGGGAACATAAGGAAGTGCTTACAAACCAAGGCAAATAAAAGTTTAGAATTGATAAGTATGTCAAAATATTACtat-agccatgatatacaa i dasNov3.JH563077 C 0 I 8902 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=15300.000000 s hg38.chr14_KI270725v1_random 3127 1 + 172810 C s panTro5.chr3 201997651 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765688 1 - 205426864 C i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584623 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66065580 1 + 204787373 C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997429 1 - 192460366 C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109395 1 - 17224310 C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421579 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493053 1 - 101219884 C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879020 1 - 924385 C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720015 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055161 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726751 1 + 27742158 C i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264191 1 - 4835464 C i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723092 1 + 4093027 C i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11067953 1 + 30473821 C i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772853 1 - 149736546 C i mm10.chr6 C 0 C 0 s canFam3.chr20 16601967 1 + 58134056 C i canFam3.chr20 C 0 C 0 e dasNov3.JH563077 1837836 8902 - 2187301 I e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=4955103.000000 s hg38.chr14_KI270725v1_random 3128 380 + 172810 TTAATACATAATTTGCTTTGCTTCATAC-AAATATA--TTTTTCTGCTTTTGTTTTCTATGGTCAATTACCACTGTCTGTCATGTTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCCAA----GAGCTTATATATAAAACAAATGTTTTTAAAACTGTGCCTATAATAGCACACAACAGC-AAGTATTAGATTCCACAATCATAATATTTGGGAAATAAAATGTTATGGACTCCAAGAGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT s panTro5.chr3 201997652 380 - 202621043 TTAATACATAATTTGCTTTGCTTCATAC-AAATATA--TTTTTCTGCTTTTGTTTTCTATGGTCAATTACCACTGTATGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCCAA----GAGCTTATATATAAAACAAATGTTTTTAAAATTGTGCCTATAATAGCACACAACAGC-AAGTATTAGATTCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGAGAACTGTATATATTTCTAACTCTATTC-AAAGATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204765689 380 - 205426864 TTAATACATAATTTGCTTTGCTTCATAC-AAATATA--TTTTTCTGCTTTTGTTTTCTATGGTCAATTACCACTGTATGTCATGTTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCCAA----GAGCTTATATATAAAACAAATGTTTTTAAAATTGTGCCTATAATAGCACACAACAGC-AAGTATTAGATTCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGAGAACTGTATATATTTCTAACTCTATTC-AAAGATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67584624 379 + 86207423 TTAATACATAACTTGCTTTGCTTCATAC-AAATATA--TTTTTCTGCTTTTGTTTTCTATAGTCAATTACCACTGTCGGTCATGTTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCTAA----GAGCTTATATATAAAACAAATGTTTTTAAAATTGTGCCTATAACAGCACACAACAGG-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTG-TTATTAGAT i nomLeu3.chr21 C 0 I 105 s rheMac8.chr2 66065581 381 + 204787373 TTAATACATAATTTACTTTGCTTCATACAAAATATA--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997430 381 - 192460366 TTAATACATAATTTACTTTGCTTCATACAAAATATA--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109396 381 - 17224310 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGTCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421580 378 - 41321030 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAATATTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAAC---ATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493054 381 - 101219884 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCGCAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879021 381 - 924385 TTAATACATAATTTGCTTTGCTTCATACAAAATATA--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTTCTGGGATCATGACCTAA----GAGCTTGTATATAAAACAAACATTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGGATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720016 381 - 10587913 TTAATACATAATTTGCTTTGCTTCATACAAAATATG--TTTTTCTGCTTTTGTTTTCTATAGCCAGTTACCACAGTCTGTCATGCTGT-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCATGACCTAA----GAGCTTGTATATAAAACAAACGTTTTTAAAATTGTGCCTATAATAGCATACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAAGTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTGTTAGTGTTTATTAGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055162 383 - 98464013 TTAATATATAATTTGCTTTGCTTCATACAAAATATATTTTTTTCTGCTTTTGTTTTCTATAGCCAATTACCACTGTCTGTCATGTTCC-ATTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATCTAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGAACCTATAATAGCACACAACAGC-AAGTATTAGATGCCACTAACATAATATTTGGGAAATAAAATGTTATTGACTCCAAGGGAACTGTATATATTTCTAACTCTATAC-AAAAATGTCCTGTAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTATAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27726752 383 + 27742158 TTAATACATAATTTGCTTTGCTTCATACAAAATATAATTTTTTCTGCTTTTGTTTTCTATAGCCAATTAACACTGTCTGTCATGTTCC-ACTATTATCACTTTTAGAAAGTGATTCTATCATACAAAACCAACATAATATAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGCGCCTATAATAGCACACAACAGC-AAGTATTAGATGCCACAAACATAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGGGTTTATTATAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264192 375 - 4835464 TTAATACATAATTTGCTTTGCTTC--ACAAAATATCATTTTTTCTGCTTTTGTTTTCTATAGCCAATTACCACTGTCTGTCATGTTCC-ACTATTATCACTTTTAGAAAGTGATTCTATCATA------CAATATAATATAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGTGCCTATAATAGCACACAACAGC-AAGTAGTAGATGCCACAAGCTTAATATTTGGGAAATAAAATGTTATGGACTCCAAGGGAACTGTATAAATTTCTGACTGTATTC-AAAAATGTCCTGCAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTATAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723093 380 + 4093027 --AATATATAATTTGCTTTGCTTCATACAAAATACAA-CTTTTCTGCTTTTGTTTTCTATAGCCAATTACCACTGTCTGTCATGTTCC-ACTATTATCACTTTTAGAAAGTGATTCTATCATATAAAACCAACATAATATAAAATGACTTCCTGAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTATT-AAATTGCACCTATAATAGCACACAACAGC-AAGTTTTAGATGCCACAAACATAATATTTGGGAAACAAAATGTTATGGACTCCAAGGGAACTGTATATATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAGAATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTATAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11067954 372 + 30473821 TTAATACATGATTTGCTTTG-----TACA----ATT--TTTGTTTGTTTTTATTTTCTATAGCCAATTGCCG-TGTCAGTCCCATTGTCACTATTTTCATTTTCAGAAAGTGATTCGATCATATAAAACCTACATAATCTAAAATGACTTCCTGATATCGTGACCTAA----GAGCttatatataaaataaatgtttttaaaattGTGGTTGTAATAGCACATAACAGC-AAGTATTAGATACCACAGACATAATATCAGGAAAATAAAATGTTATGGACTCCAAGGGAACTGTATAAATTTCTAACTCTATTC-AAAAATGTCCTGTAACTCTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTGGTGTTTATTAGAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45772854 372 - 149736546 --AAACAATAATTTGCTTAA-TTCACATAACAC-----TTTTCCTCCTTTTGTTCTCTATGGCCAATTACCA----CTGTCAGGTTGTCACTACAGTACTCTTTAGGAAATGATTGTATCATATAAAATCAACATAATCTAAAATGACTTCTGGAGATCTTGACCTAA----GCACTTATATATAAAACAAATGGTTTTTAAATTGTGGTTATAATAGCACATAAAAGC-AAGGAGTAGTTGCAACACACATAATATCTGGCAAATAAAATGTTATGGACTCCAAGGGAACTGTAGATATTTCTAACTCCATTC-AAAAATGTCCTGGAACTCTAG-ATAGAATTTCCCTGGGCTACAGAAAAGCACAGATGGTATTAATGTTTATTAGCT i mm10.chr6 C 0 C 0 s canFam3.chr20 16601968 373 + 58134056 TTAATACATAATTTGC-----TTCATGCAAATT-----TTTTTCTGCTTTTGTTTTCTATAGCGAAATACTATTGTCATTCATGTTGTCACTACTGTCATTTCTAGAAAATGATTCTATCATATAAAA-TAGCATAATATAAAATGACTTCCTAAGATCCTGACCTAA----GAGCTTATATATAAAACAAATGTTTTTTAAATTGTGCCTATAATGGCACATAACAGC-AGGCATTAGATGCCATGGACGTAATATCTGGCAAATAAAATGTTATGGACTCCAAGGGAACTGTAGATATTTCTAACTCTATTC-AAAAATGTACTGTAACTGTAG-ATAGAATTTCCCTGGGCTATAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1846738 378 - 2187301 TTCATACATAATTTGCTTTCTTT----------ATC--TTTCCTATCTTTTGTTTTCTTTAGCCAAGTAAGACTGGCTTTCATCTTATCACTATTGTCATTTCTGAAGAGTGATTCTATCATATAAAAGCAGCATAATCTAAAATGACTTCCCAAGATCTTGACCTAATATTAAGCTTATATATAAAACAAATGTTTTTTAAATTGTGGCTATAACATCACATAACAGTAAAGCATTAGATACCATGGACATAATATCTGGCAAATAAAATGTTATAGATTCCAAGGGAACTGTAGATATTTCTAACTCTATTCAAAAAATGTCCTGCAACTCTAG-ATAGAATTTCCCTGGGCTACAGAAAAGCACAGATGGTATTAGTGTTTATTAGAT i dasNov3.JH563077 I 8902 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=1119183.000000 s hg38.chr14_KI270725v1_random 3508 103 + 172810 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAA--CACTGAAGTTCTGC--TAATATGGCAAGAATATGGAGATCAGAAACAACAATG----CAAAGTAGACATTCCTTGT s panTro5.chr3 201998032 103 - 202621043 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCAAGAATATGGAGATCAGAAGCAACAATG----CAAAGCAGACATTCCTTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766069 103 - 205426864 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCAAGAATATGGAGATCAGAAACAACAATG----CAAAGCAGACATTCCTTGT i panPan2.chr3 C 0 C 0 s rheMac8.chr2 66065962 103 + 204787373 CCATGAAGCTTGCTTT--AAAATATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAGAAACAACAATG----CAAAGTAGACATTCTTTGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997811 103 - 192460366 CCATGAAGCTTGCTTT--AAAATATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAGAAACAACAATG----CAAAGTAGACATTCTTTGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109777 103 - 17224310 CCATGAAGCTTGCTTT--AAAATATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAGAAACAACAATG----CAAAGTAGACATTCTTTGT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17421958 103 - 41321030 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAGAAACAACAATG----CAAAGTAGACATTCCTTGT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493435 103 - 101219884 CCATGAAGCTTGCTTT--AAAAAATACATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACCAGAAACAACAATG----CAAAGTAGACATTCCTTGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879402 103 - 924385 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGACTAGAAACAACAATG----CAAAGTAGACATTCCTTGT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720397 103 - 10587913 CCATGAAGCTTGCTTT--AAAAAATATATTTG--AAA--CACTGATGTTCTGC--TAATATGGCCAGAATATGGAGATCAGAAACAACAATG----CAAAGTAGACATTCCTTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055545 103 - 98464013 CCATGAAGCTTGCTTT-AAAAAAATACATTTG--AAA--CACTTATGTTCTGC--TAGTATGGCTAAAATATGGAGATCAGAAACAACAATG----CTAAGTAGA-ATTCCTTGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727135 104 + 27742158 CCATGAAGCTTGCTTT-AAAAAAATACATTTG--AAA--CACTTATATTCTGC--TAGTATGGCTAAAATATGGAGATCAGAAACAACAATG----CTAAGTAGACATTCCTTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264567 105 - 4835464 CCATGAAGCTTGCTTTAAAAAAAATACATTTG--AAA--CACTTATGTTCTGC--TACTATGGCTAAAATATGGAGATCAGAAACAACAATG----CTAAGTAGACATTCCTTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723473 104 + 4093027 CCATGAAGCTTGCTTT-AAAAAAATACATTTG--AAA--CACTTATATTCTGC--TAGTATGGCTAAAATATGGAGATCAGAAACAACAGTG----CTAAGTAGACATTCCTTGT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11068326 103 + 30473821 CCATAACGGTGGCTTT--TAAAAATATATCTGAAAAA--CACTGAAGTTTTGC--TAATATGGCCAGAATA--GAGGTCAGAACCAATAAGG----CAAAGTCGGCATTCATGGT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45773226 111 - 149736546 CCATGAAGGTTACTTT--TAAAAATATATCTG--AAAAGCACTAAAGTTCTGCCTCAGAATGGTCAAAATACAGAGGTTGGAACCCACAGTGTCAACAAAGTAAATAGTCACTGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16602341 105 + 58134056 CCATGAAAGTTGCTTT--TAAAAATATATCTGAAAAA--CACTGAAGTTCTGC--TAATATGGCCAGAATAAGGAGGTCAGAAACAACAATG----CAAAGTAGAAACTCCTCGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847116 105 - 2187301 CCATGAAGGTTGCATT--TAAAAATGTATTTGAAAAA--CAGTAAAGTTCTGC--TAATATGGCCAAAATTTGGAGGTCAGAAACAGCACTG----CAAAATAGATATTCATCAT i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I e nomLeu3.chr21 67585003 105 + 86207423 I a score=3306214.000000 s hg38.chr14_KI270725v1_random 3611 351 + 172810 GGGTGGAAGAAAAT---AAAA-----ATATTTATATTAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACATTAATTTATTTTGGGCTTGGTTATAAAATTAGTTTTAGATTGAGCTTATAAAGTAATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCAGTCCagttcattgtctaaa-----gaaagaaactg----atgcataaacag-------aaaaaaaaa--acaatggattgt-gataatttctcaaa-aaatgtatgat-gaagtgttacagcagc--agagtagg----agcagcacttgagatttgagaagatcctca----aagaagagtttag-cccatgtattgaaagataa s panTro5.chr3 201998135 349 - 202621043 GGGTGGAAGAAAAT---AAAA-----ATATTTATATCAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACATTAATTTATTTTGGGCTTGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAAGTAATTAGGCTAATACT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttgattgtctaaa-----gaaagaaaccg----atgcataaacag-------aaaaaaaa----caatggattgt-gataatttctcaaa-aaatgtacgat-gaagtgttatagcagc--agagtagg----agcagcacttgagatttgagaagatcctca----aagaagagtttag-cccatgtattgaaagataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766172 349 - 205426864 GGGTGGAAGAAAAT---AAAA-----ATATTTATATCAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACATTAATTTATTTTGGGCTTGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAAGTAATTAGGCTAATACT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttgattgtctaaa-----gaaagaaaccg----atgcataaacag-------aaaaaaaa----caatggattgt-gataatttctcaaa-aaatgtacgat-gaagtgttatagcagc--agagtagg----agcagcacttgagatttgagaagatcctca----aagaagagtttag-cccatgtattgaaagataa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585108 353 + 86207423 GGGTGGAAGAAAAT---AAAA-----ATACTTATATTAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACATTAATTTATTTTGGGCTCGGTTGTAAAATTAGTTTTAGATTGAGCTTATAAAGTTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atgcacaaacag-------aaaaaaaaactacaatggattgt-gataatttctcaaa-aaatgtctgat-gaagtgttataggagc--agagtagg----agcagcacttgaggtttgagaagatcctca----aagaagagtttag-accatgtattgaaagataa i nomLeu3.chr21 I 105 C 0 s rheMac8.chr2 66066065 355 + 204787373 GGGTGGAAGAAAAT---AAAA-----ATATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atgcatagacag-------aaaaaaaa-ttacaatggattgt-gataatttctcaaa-aaaagtatggt-gaagtgttataggagc--agagtagg----agcagcacttgagatttgagaagatcctcaaag-aagaagagtttag-cccatgtattgaaaggtaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60997914 355 - 192460366 GGGTGGAAGAAAAT---AAAA-----ATATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atgcatagacag-------aaaaaaaa-ttacaatggattgt-gataatttctcaaa-aaaagtatggt-gaagtgttataggagc--agagtagg----agcagcacttgagatttgagaagatcctcaaag-aagaagagtttag-cccatgtattgaaaggtaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11109880 355 - 17224310 GGGTGGAAGAAAAT---AAAA-----ATATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAATGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atgcatagacag-------aaaaaaaa-ttacaatggattgt-gataatttctcaaa-aaaagtatggt-gaagtgttataggagc--agagtagg----agcagcacttgagatttgagaagatcctcaaag-aagaagagtttag-cccatgtattgaaagataa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422061 355 - 41321030 GGGTGGAAGAAAAT---AAAA-----ATATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATCAGTTGTAGATTGAGCTTATAAAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------TGGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atgcatagacag-------aaaaaaaa-ttacaagggattgt-gataatttctcaaa-aaaagtatggt-gaagtgttataggagc--agagtagg----agcagcacttgagatttgagaagatcctcaaag-aagaagagtttag-cccatgtattgaaagataa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493538 356 - 101219884 GGGTGGAAGAAAAT---AAAA-----ATATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCAATTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttcactgtctaaa-----gaaagaaactg----atgcatagacag------aaaaaaaaa-ttacaatggattgt-gataatttctcaaa-aaaagtatgat-gaagtgttataggagc--agagtagg----agcagcacttgagatttgagaagatcctcaaag-aagaagagtttag-cccatgtattgaaagataa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879505 355 - 924385 GGGTGGAAGAAAAT---AAAA-----ATATTTATGTTAACCAAGTCTAAGTGCAA--------CAG-CTCGATTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATTAGTTGTAGATTGAGCTTATAAAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atgcatagacag-------aaaaaaaa-ttacaatggattgt-gataatttctcaaa-aaaagtatggt-gaagtgttataggagc--agagtagg----atcagcacttgagatttgagaagatcctcaaag-aagaagagtttag-cccatgtattgaaagataa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720500 353 - 10587913 GGGTGGAAGAAAAT---AAAA-----ATATTTGTGTTAACCAAGTCTAAGTGCAA--------TAG-CTCGGTTAATACA-----------------------------AAACATTAATATATTTTGGGCTGGGTTGTAAAATTAGCTGTAGATTGAACTTATACAATTATTAGGCTAATATT--GTCTCCTCTGAGAGGAACCTGGAA--------------CAGTGCTATACCATCTGTCCagttcattgtctaaa-----gaaagaaactg----atacataaacag--------aaaaaag-ttacaatggattgt-gataatttctcaaa-aaaggtatgat-gaagtg-tataggagc--agagtagg----agcagcacttgagatttgagaagatcctcagag-aagaagagtttag-cccatgtattgaaaggtaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46055648 352 - 98464013 GGGTGGAAGAAAAT---AAAA-----ATATTTCTATTAACCAGGTCTAAGTGCAA--------TAG-CTCGATTAATACA-----------------------------AAACATTAATTTATTTTGGGC------------TCAGTTTTAGATTGAGTTTATAACATCATTAGGCCAATATT--GTCTCCTCTGAACTGAACCTGGAAGACC----------AAGTGCTATACCATCTCTTCagatcattgtctaaa-----gaaagaaactg----acacataaacag-----aaaaaaaaaa-ctacaatgaattgt-gatcatttcttaag-aaaagtatgagaggagtgtcataggagcaaagagtagg----agtagcacttgagattggagaaggtcctcaagg-aagaggagtttag-cccatgtattgaaagataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727239 348 + 27742158 GGGTGGAAGAAAAT---AAAA-----ATATTTCTATTAACTAGGTCTAAGTGCAA--------CAA-CTCAATTAATGCA-----------------------------AAACATTAATTTATTTTGGGC------------TCAGTTTTAGATTGAGTTTACAAAATCATTAGGCCAATATC--ATCTCCTCTGAACTGAACCTGGAAGAGC----------AAGTTCTATATGGTTTCTCCagatcattgtctaaa-----gaaagaaactg----atgcataaacag------aaaaaaaaa-ctacaatgaattgt-gatcatttcttaag-aaaggtatgagagaaatgttataggagcaaagagtagg----agcagcacttgagattggagaaggtcctca----aagaagagtttag-cccatgtattgaaagataa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 264672 355 - 4835464 GGGTAGAAGAAAAT---AAAA-----ATATTTCTATTAACAAGGTCTAAGCGCAA--------CAG-CTCAATTAATGCA-----------------------------AAACATTAATTTATTTTGGGC------------TCAGTTTTAGATT--GTTTGTCAAATCATTAGGCCAATATT--GTCTCATCTGAACTGAACCTGGAAGAGC----------AAGTTCTATACCATTTCTCCagatcattgtctaaa-----gaaagaagctg----atgcataaacagaaaaaaaaaaaaaaa-ctacaatgaattgc-gatcatttcttaag-aaaggtatgagaggagtgttatgggagcaaagagtagg----agcagcacttgagattgaagaaggtcctcaaag-aagaggagtttag-cccatgtattgaaagataa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723577 356 + 4093027 GAGTGGAAGAAAAT---AAAA-----ATATTTCTATTAACTAGGCCTAAGTGCAA--------CAG-CTCAATTAATGTA-----------------------------AAACATTAATTTATTTTAGGC------------TCAGTTTTAGATTGAGTTTATAAAATCATTAAGCCAATATT--GTCTCCTCTGAACTGAACCTGGAAGAGC----------AAGTTCTATACCATTTCTCCagatcactgtctaaa-----gaaagaaactg----atgcataaacag-aaaaaaaaaaaaaa-ctacaatgaattgc-gatcatttcttaag-aaaggtatgagaggagtgttataagagcaaagagtagg----agcagcacttgagattggagaaggtcctcaaag-aagaggcgtttag-cccatgtattgaaagataa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11068429 351 + 30473821 GGGTGAAAGAAAATTACAAAATATACATATTTCTATTAATAAAGTCAAAGTTCAA--------CAA-CTTGATTAATAGA-----------------------------AAATATT-ATTTCTTGAGGGC-----TAAAAAATCTGGTATAGATTGAGTTTATAAATTCATGAGACCAATATT--ATGTCTACTGAACTAAACCTGGAATAGT---------GAGGTGCTGGACCACCTCTGAAATTCATGGTCTAAA-----GGAGGAAATTG----AAAACTAAACAG------AAAAAAAAA-GCACAATGGATTGT-GGTTAGTTCTGAAGCACAGATATGAG-AGAAAGCCATA-------AGAGAAGG----AGCAGCGTTTGGGATTTGAAAAAAATTTCA--------AGAGCAAGA-CCCATTT-TTAAAAGaaaa i otoGar3.GL873534 C 0 I 160 s mm10.chr6 45773337 354 - 149736546 -GGTGGTAGGAAAT---AAGA-----ATGTTTCCAATAACAAAGTAGAATCTTAATAAAAATGCAG-CCCCAATAATGCT-----------------------------ATGCTTC-------------CTAAGTTACAAA-TCTGTCGCAGG----GTTTATGCATTATCTGAAGCAATATT--GCCTCCACTGGAGTGAACCTAGGATAACA--------GGGATGTGATACAATCCCTTC----TTTAGTCTAGT-----AGAGGAAAGCTCAGCACACAGAGACAA-------GCACAGAG-GTACAATGCATTGT-GGTCA-TTCTCAAT-AGAGATATGCT-AGAGCACCACAGG-TC--TGAGGACACCTTGGCTGTATTTGGCTGTGGAGAAACTGGTAAAAGAAAGACAAGTTGGGTTTCATGGATTGAAAGATGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16602446 373 + 58134056 AGGTGGGAGTGAAT---AAAA-----ATATTTCTATTAACAAAGTCTAAGGGTAA--------CAGACTTaaaaaaaaaaagaaagaaaagaaaaaaacaaaaaCCAGGAAACATTCACTTACATTGGGCTAAATAATAAAATCAGTTGCACACTGTTTTTATAAATTCATTGGACTAACAGA--GTCTCCTCTGGACTAAACCTGGAA--------------TAGCAA-GTACCACCTG---AGTTTGCAGTCTAAG-----GGAGG----------ACCAAAGGAGGG-------GAAAAAAA-GCAAAATTGGT-----AAAAGTTCTCAAGTAGAAGTATCAT-GGAGGGTAATAGAAGAA-ACAGTAGG----AAGAGCACTTCAGGTTTGAGAAAGATTGTAAGG-AAGAGAAGTTTGG-CTCAGGTATTAAAAGATAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1847221 364 - 2187301 GGATGGAGGAAAA----GAAA-----ATATTTCCATTATCAATGTCTAAGGGTCA--------CAG-TTTGAGAAAAACA-----------------------------TAAGGAACATTTATTTTAGGATAAATTATGAA-TCAGTTAAAGACTGACTTCATAAATTCGTTACACTAGTATTAAGTCTTCACTGAACCAAACCTggaataaaaaggtaaataaggcactgtgc------tccacttgagggaggaaacagatgggagaaaatg----atccattaatag-----------aaaa-tcacaataagttgcagttaagtcctcaagtaaagaaaagac-agagtgtcataggagcaaagagtaga----aacagccctttggagttgagaaaaaatcca----aagaggatttt-g-cccatgtactgaaggatga i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I a score=308137.000000 s hg38.chr14_KI270725v1_random 3962 30 + 172810 gtgggaatttgtcaatgagag-gtgaaagaa s panTro5.chr3 201998484 30 - 202621043 gtgggaatttgtcaatgagag-gtgaaagaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766521 30 - 205426864 gtgggaatttgtcaatgagag-gtgaaagaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585461 30 + 86207423 gtgggaatttgtcagtgagag-gtgaaagaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066420 30 + 204787373 gtgggaatttgtcattgagag-gtgaaagga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998269 30 - 192460366 gtgggaatttgtcattgagag-gtgaaagga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110235 30 - 17224310 gtgggaatttgtcattgagag-gtgaaagga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422416 30 - 41321030 gtgggaatttgtcattgagag-gtgaaagga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493894 30 - 101219884 gtgggaatttgtcattgagag-gttaaagga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879860 30 - 924385 gtgggaatttgtcattgagag-gtgaaagga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720853 30 - 10587913 gtgggaatttgtcattgagag-gtgaaagga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056000 30 - 98464013 gtagaaatttgtcattgagag-gtaaaagaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727587 30 + 27742158 gtaggaatttgtcattgagag-gtaaaagaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265027 30 - 4835464 gtaggaatttgtcattgagag-gtaaaagaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723933 30 + 4093027 gtaggaatttgtcattgagag-gtaaaagaa i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45773691 30 - 149736546 ATGGAAATGTGACATCCACAG-AAGAAAGAA i mm10.chr6 C 0 I 148 s canFam3.chr20 16602819 30 + 58134056 GTAGGGATCTGCCACCAAAAG-GTTGGAATA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1847585 30 - 2187301 gtag-ATTTCATCATTAACAGAGTAAAAGAA i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=2395356.000000 s hg38.chr14_KI270725v1_random 3992 244 + 172810 ggcattctgtgcaTATCTGT---GATTTCCC---AATGGCTAAGATATGAAGTACTTGCAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAACTTGGATTCATATTATATGTCTTGGTAAAAAATTGATTTTT-ATCTCT-CTTGGTCTTG-GGAATCAGTAGAAGCCTTTATTTTTTT-CCCTTGAATA----AGATTTTATTTTGAAATAGTTT--AAGATAAACAAGTTTTTAAAATAGTACAGAG------GTTC s panTro5.chr3 201998514 245 - 202621043 ggcattctgtgcaTATCTGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGCAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAACTTGGATTCATATTATATGTCTTGGTAAAAATTTGATTTTT-ATCTCT-CTTGGTCTTG-GGAATCAGTAGAAGCCTTTATTTTTTTTCCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaacagtacagag------attc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766551 245 - 205426864 ggcattctgtgcaTATCTGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGCAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAACTTGGATTCATATTATATGTCTTGGTAAAAATTTGATTTTT-ATCTCT-CTTGGTCTTG-GGAATCAGTAGAAGCCTTTATTTTTTTTCCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaacagtacagag------attc i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585491 244 + 86207423 ggcattctgtgcaTATCTGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGCAACAATGAAGAAGAGTGATGATTAGAG------ACTTTAAAAACAATTTGGATTCATATTATATGTCTTGGTAAAAATTTGATTTTT-ATCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttactttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066450 244 + 204787373 ggCATTCTGTCCATATTCGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998299 244 - 192460366 ggCATTCTGTCCATATTCGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTGTTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110265 244 - 17224310 ggCATTCTGTCCATATTTGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422446 244 - 41321030 ggCATTCTGTCCATATTCGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGTGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64493924 244 - 101219884 ggCATTCTGTCCATATTTGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATAGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 879890 244 - 924385 ggCATTCTGTCCATATTCGT---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATATTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6720883 244 - 10587913 ggCATTCTGTCCATATTTGC---GATTTCCC---AATGGCTAAGATATGAACTACTTGAAAGAATGAAGAAGAGTGATGATTAGAG------AGTTTAAAAACAATTTGGATTTATATTATATATCTTGGTAAAAATTTGATTTTT-GTCTCT-CTTGGCCTTGAGGAATCAGTAGAAGCCTTTATTTTTT--CCCTTGAATA----AGAttttattttgaaatagttt--aagataaacaagtttttaaaatagtacagag------attc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056030 241 - 98464013 ggcattctgtgcacatctgt---gaattccc---agtggctaagatatgaactacTTGCAAGAATGAAGAAGGGTGATGATTACAG------AGTTTAAAAACAATTTGGATTTATATTATGGGTCTCGGTAAAAGTTTGATTTTT-ATCTCT-CTTGGCCTTGAGGAATCAGGAGAAG-GCT--TTTCCC--CCtttgaata----agattttattttaaaatagtgt--aggataaacaagttcataaaataatacagag------attc i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727617 243 + 27742158 ggcattctgtgcacatctgc---gaactccc---aatggctaagatatgaactgcTTGCAAGAATGAAGAAGAGTGATGATTACAG------AGTTTAAAAACAATTAGGATTTATATTATATGTCTTGGTAAAAGTTTGATTTTTAATCTCT-CTTGTCCTTGAGGAATCAGTAGAAGCCCT--TTTCTG--CCTTTGAGTA----AGATTTTATTTTGAAATAGTGT--AGGATAAACAAGTTTATAAAATAATACAGAG------ATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265057 232 - 4835464 ggcattctgtgcacatctgc---gaactccc---aatggctaagatatgaactacttgcaagaatgga----------gattacag------agtttaAAAACAATTTAGATTTATATTATATGTCTTGGTAAAAGTTTGATTTTT-ATCTGT-CTTGGCCTTGAGGAATCAGCAGAGGCCTT--TTCCCC--CCTTTGAATA----AGATTTTATTTTGAAATAGTGT--AGGATAAACAAGTTTATAAAATAATAAAGAG------ATTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3723963 237 + 4093027 ggcattctctacacatgtgc---gaactccc---aatggctaagatatgaactacTTGCAAGAATGAAGAAGAGTGATGATTACAG------AGTTTAAAAACAATTTGGATTTATATTATACGTCTTGGTAAAAGTTTGATTTTT-CTCTCT-CTTGGCCTTGATGAATCAGTAGAAGCCTT--TTTCCC--CCTTT---------AGATTTTATTTTGAAATAGTGT--AGGATAAACAAGTTTATAAAATAATACAGAG------ATTC i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45773869 232 - 149736546 GACATCCCATCCATATCTGC---AAGCGACTAAGAATGGCTGAGATAACAACCACTTGTATAAATAAAAAGGATTGATATCTA-AG------AAAGTAAATTTATTTTGGACTTGCATTCTGTGCACTGATAAAACTTTGTATGTT-GTCCATGATTGGTCATGAGGAATCATTATAAGC-------------CTCTTAAAAGATACATATTACAATTTGAAGTAGCTTAAAAGATTAACAAA----------AGAACAAAg------gtcc i mm10.chr6 I 148 I 1335 s canFam3.chr20 16602850 243 + 58134056 GGAATTCCATGCATACCTGTGAGGATTTCAG---AATGGCTAAGATATAAACTACTTGTAAGAATTAAGAGGAATGATACTTAAGG------AAGTTAAAAATGATCTGCATTAACA-TGTATGCTTTGGTAAGAGTCTGGATTT--ACCTCT-CTGCACCTTGAGGAATCAGAAGCCTCCCTCATCTTTT--TTTTT-TTTA----ATAGTTTATTTTGAATTAGCTA--AAGATGAACAAGTTT-TGAAATAGTACAGAG------ATTC i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1847615 256 - 2187301 GATAGTCTACATATGCCTATGAGGATTACAG---AATGGCCAAAACATAAACCACTAGCAGGAATGAAGAGGAGTGATGTGTAAGGAAAGATAGTTTGAATATACTTTGGATTTACACTGTATTTCTTAGTAA-ATTTTGGATTTT-ATCTTT-CTTGGCCTCCAGAAATCAATAGAAGCCTTTCTTTTTt--tcttt-aata----at-ttttatttggaaatagatt--aagaccagcaagttgaaaaaatagtatagagtcacatgttc i dasNov3.JH563077 C 0 C 0 e tarSyr2.KE939134v1 174447 4561 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=1802048.000000 s hg38.chr14_KI270725v1_random 4236 210 + 172810 CCAAAGAAACT-TGTAAGCAAAGAAGTTCatccaaacc-aaaaaattgatacaggt---atgctattaactagactacagatcata-ctgtgatttcatctactttt-cAGTCATCTTTTCTTCCC----TTAgtatatagttctat-agattccatgacatatatagattagtgta----------tcactacaatcaagatagagtactg----ttctatcaacat-aaagaaat s panTro5.chr3 201998759 210 - 202621043 ccAAAGAAACT-TGTAAGCAAAGAAGttcatccaaacc-aaaaaactgatataggt---atgctattaactagactacagatcata-ctgtgatttcatctactttt-cAGTCATCTTTTCTTCCC----TTAgtatatagttctat-aaattccatgacatatatagattggtgta----------tcactacaatcaagatagagtactg----ttctatcaacat-aaagaaat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204766796 210 - 205426864 ccaaagaaact-tgtaagcaaagaagttcatccaaacc-aaaaaattgatataggt---atgctattaactagactacagatcata-ctgtgatttcatcTACCTTT-CAGTCATCTTTTCTTCCC----TTAgtatatagttctat-aaattccatgacatatatagattagtgta----------tcactacaatccagatagagtactg----ttctatcaacat-aaagaaat i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585735 210 + 86207423 ccAAAGAAACT-TGTAAGCAAAGAAGttcatccaaacc-aaaaaattgatataggt---atactattaactagactacagatcgta-ttgtgatttcatctactttt-cagtcatctttccttccc----ttagtatatagttctat-aaattccatgacatacatagattagtgta----------tcactacaatcaagatagagtacta----ttctatcaccat-aaagaaat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066694 212 + 204787373 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaagatagagtaccg----tgatatcaccat-aaagaaat i rheMac8.chr2 C 0 I 7 s macFas5.chr2 60998543 212 - 192460366 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaagatagagtaccg----tgatatcaccat-aaagaaat i macFas5.chr2 C 0 I 7 s macNem1.NW_012018021v1 11110509 212 - 17224310 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaggatagagtaccg----tgatatcaccat-aaagaaat i macNem1.NW_012018021v1 C 0 I 7 s cerAty1.NW_012009469v1 17422690 212 - 41321030 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaggatagagtaccg----tgatatcaccat-aaagaaat i cerAty1.NW_012009469v1 C 0 I 7 s chlSab2.chr22 64494168 212 - 101219884 ccaaagaacctctgtaagcaaagaagttcatacagaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aacatccatgacaaatatagattagtgta----------tcactacaatcaggatagagtactg----tgatatcaccat-aaagaaat i chlSab2.chr22 C 0 I 7 s manLeu1.NW_012098965v1 880134 212 - 924385 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aaattccatgacaaatatagattagtgta----------tcactacaataaggatagagtaccg----tgatatcaccat-aaagaaat i manLeu1.NW_012098965v1 C 0 I 7 s colAng1.NW_012114711v1 6721127 212 - 10587913 ccaaagaacctctgtaagcaaagaagttcatgcaaaccaaaaaaattgatataggt---atactattaactagactacagatcata-ttgtgattccatctactttt-cAGTCAACTTTTCCTCCC----TTAgtatatagttctat-aaattccatgatatatatagattagtgta----------ttactacaatcaggatagagtaccg----ttatatcaccac-aaagaaat i colAng1.NW_012114711v1 C 0 I 7 s calJac3.chr15 46056271 210 - 98464013 ccaaataacctctgtaagcaaagaaattcattcaaacc--aaaaatcgatataggtgtaacactattaactagactacagatggta-ttgtgatttcatctactttt-cagtcatattttcttctc------agtgtatagtgctat-aaattctataatgtatatagattagggta----------tcactacaatcaggatagagtaccg----ttctttcaccataaaaaaa-- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27727860 211 + 27742158 CCAAATAACCTCTGTAAGCAAAGAAattcattcaaacc--aaaaattgatataggtataatgctattaactagactacagatggta-ttgggattttatctactttt-cagtcatattttcttctc----tTAgtatataatgctat-aaattctataacatatatgtattagtgta----------tcactgcaatcaggatagggtacca----ttctttcaccat-aaaaaa-- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265289 211 - 4835464 CCAAATAACCTCTGTAAGCAAAGAAatttattcaaacc--aaaaattgatataggtgtaatactattaactagactacagatggta-ttgtgatttcatctactttt-caattatattttcttctC----TTAgtatattgtgctat-caattctataacatatatagatcagcgta----------tcactacaataaggatagagtaccg----ttctttcaccat-aaAAAA-- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724200 212 + 4093027 CCAAATAACCTCTGTAAGCAAAGAAattaattcaaacc--aaaaattgatataggtgtaatactattaactagactacagatggta-ttgtgatttcatctactttt-cagtcatattttcttctc----ttagtatatagtgctat-aaattctataacctatatagattggtgta----------tcactacaatcaggatagagtaccgt---ttttttcaccat-aaaaaa-- i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603093 221 + 58134056 -CTATGTACCTGTCTTATCAAAAAAA-----AAAaaac-agaaaattaactttcatacaatgctattaattagactgcagacctta-ttcagatttcatcagcttttacaggaa---tttcttccc----tcactgtatagttctttgaaatactttcacacatacatattcataaaaaacaggtagtcaccacaatcagtatacagaactgtttgttctatcatcat-aaagaaac i canFam3.chr20 C 0 I 9 s dasNov3.JH563077 1847871 213 - 2187301 ---------ctgtataaccaaagaaaactgtcaaaacc-aggaaatcgacattggtacaatactatcaattactagtgagacctaatttaagatttcaccagctttt-acatatactccatctccccaacttggtttataggtctg--aaatcctatcatatgtatagtttagtgta------accatcactacaaacagaatatagaactg----ttccatcactac-aaagaaac i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45774101 1335 - 149736546 I e tarSyr2.KE939134v1 174447 4561 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=12376.000000 s hg38.chr14_KI270725v1_random 4446 1 + 172810 t s panTro5.chr3 201998969 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767006 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585945 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066913 1 + 204787373 t i rheMac8.chr2 I 7 C 0 s macFas5.chr2 60998762 1 - 192460366 t i macFas5.chr2 I 7 C 0 s macNem1.NW_012018021v1 11110728 1 - 17224310 t i macNem1.NW_012018021v1 I 7 C 0 s cerAty1.NW_012009469v1 17422909 1 - 41321030 t i cerAty1.NW_012009469v1 I 7 C 0 s chlSab2.chr22 64494387 1 - 101219884 t i chlSab2.chr22 I 7 C 0 s manLeu1.NW_012098965v1 880353 1 - 924385 t i manLeu1.NW_012098965v1 I 7 C 0 s colAng1.NW_012114711v1 6721346 1 - 10587913 t i colAng1.NW_012114711v1 I 7 C 0 s calJac3.chr15 46056481 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728071 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265500 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724412 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603323 1 + 58134056 t i canFam3.chr20 I 9 C 0 s dasNov3.JH563077 1848084 1 - 2187301 t i dasNov3.JH563077 C 0 I 9 e mm10.chr6 45774101 1335 - 149736546 I e tarSyr2.KE939134v1 174447 4561 + 958716 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=64176.000000 s hg38.chr14_KI270725v1_random 4447 6 + 172810 tatttt s panTro5.chr3 201998970 6 - 202621043 tatctt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767007 6 - 205426864 tatctt i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585946 6 + 86207423 tatctt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066914 6 + 204787373 tatctt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998763 6 - 192460366 tatctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110729 6 - 17224310 tatctt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422910 6 - 41321030 tatctt i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59558372 5 + 187378091 -ttctt i papAnu3.chr2 N 0 I 209 s chlSab2.chr22 64494388 6 - 101219884 tatctt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880354 6 - 924385 tatctt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721347 6 - 10587913 tgtctt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056482 6 - 98464013 tatctt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728072 6 + 27742158 tatctt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265501 6 - 4835464 TAACTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724413 6 + 4093027 tatctt i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 179008 4 + 958716 --cctt i tarSyr2.KE939134v1 I 4561 I 2 s canFam3.chr20 16603324 6 + 58134056 tatccc i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848094 6 - 2187301 tacccc i dasNov3.JH563077 I 9 C 0 e mm10.chr6 45774101 1335 - 149736546 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=11849.000000 s hg38.chr14_KI270725v1_random 4453 1 + 172810 t s panTro5.chr3 201998976 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767013 1 - 205426864 t i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585952 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066920 1 + 204787373 t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998769 1 - 192460366 t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110735 1 - 17224310 t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422916 1 - 41321030 t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494394 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880360 1 - 924385 t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721353 1 - 10587913 t i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056488 1 - 98464013 t i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728078 1 + 27742158 t i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265507 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724419 1 + 4093027 t i aotNan1.NW_018502033v1 C 0 C 0 s tarSyr2.KE939134v1 179014 1 + 958716 c i tarSyr2.KE939134v1 I 2 N 0 s canFam3.chr20 16603330 1 + 58134056 t i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848100 1 - 2187301 t i dasNov3.JH563077 C 0 C 0 e papAnu3.chr2 59558377 209 + 187378091 I e mm10.chr6 45774101 1335 - 149736546 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=15936.000000 s hg38.chr14_KI270725v1_random 4454 2 + 172810 -ta s panTro5.chr3 201998977 2 - 202621043 -ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767014 2 - 205426864 -ta i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585953 2 + 86207423 -ta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066921 2 + 204787373 -ta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998770 2 - 192460366 -ta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110736 2 - 17224310 -ta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422917 2 - 41321030 -ta i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494395 2 - 101219884 -ta i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880361 2 - 924385 -ta i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721354 2 - 10587913 -ta i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056489 2 - 98464013 -ta i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728079 2 + 27742158 -ta i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265508 2 - 4835464 -TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724420 2 + 4093027 -ta i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603331 2 + 58134056 -ta i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848101 2 - 2187301 tt- i dasNov3.JH563077 C 0 C 0 e papAnu3.chr2 59558377 209 + 187378091 I e mm10.chr6 45774101 1335 - 149736546 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=105527.000000 s hg38.chr14_KI270725v1_random 4456 10 + 172810 atagtcacaa s panTro5.chr3 201998979 10 - 202621043 atagtcacaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767016 10 - 205426864 atagtcacaa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585955 10 + 86207423 atagtcacaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066923 10 + 204787373 atagtcacaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998772 10 - 192460366 atagtcacaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110738 10 - 17224310 atagtcacaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422919 10 - 41321030 atagtcacaa i cerAty1.NW_012009469v1 C 0 C 0 s papAnu3.chr2 59558586 10 + 187378091 atggtctcga i papAnu3.chr2 I 209 N 0 s chlSab2.chr22 64494397 10 - 101219884 atagtcacaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880363 10 - 924385 atagtcacaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721356 10 - 10587913 atagtcacaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056491 10 - 98464013 atggtcacaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728081 10 + 27742158 atggtcacaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265510 10 - 4835464 ATGGTTACAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724422 10 + 4093027 atggtcacaa i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603333 9 + 58134056 ataattaca- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848103 10 - 2187301 aaagttaaaa i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45774101 1335 - 149736546 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=57556.000000 s hg38.chr14_KI270725v1_random 4466 7 + 172810 ccctcca s panTro5.chr3 201998989 7 - 202621043 ccctcca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767026 7 - 205426864 ccctcca i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585965 7 + 86207423 ccttccg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066933 7 + 204787373 ccttcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998782 7 - 192460366 ccttcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110748 7 - 17224310 ccttcca i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422929 7 - 41321030 ccttcca i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494407 7 - 101219884 ccttcca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880373 7 - 924385 ccttcca i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721366 7 - 10587913 ccttcca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056501 7 - 98464013 ccttcca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728091 7 + 27742158 ccttaca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265520 7 - 4835464 CCTTCCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724432 7 + 4093027 ccttcca i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16603342 6 + 58134056 cctctc- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1848113 1 - 2187301 ------a i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45774101 1335 - 149736546 I e otoGar3.GL873534 11068780 160 + 30473821 I a score=7787939.000000 s hg38.chr14_KI270725v1_random 4473 803 + 172810 cttcctcatacca-taacccctaataacc-actgatctgttctccatccctacat-ttcatcatatttaggcttttaaataaatagaatcacacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcattgaacgacaattgagtttttccagattagggctattacaaataaagttcctatgcattttagtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttatatgtcatgtgataaagatatggttaactttataaaagactgccaaactgtttttcagaataaatgtatcgatttacattctcaccaccaatgcaggagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctattaagtgtatagtg--------gcatgttattgtagctttactttgcttttctctaatagctaatgatattgcatcAAAAACCTTTTAAACCTTTAAAAATGATATTATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGTCCAGGAATGAAagactaaggaacaactgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----attgacaaaaggcaaggag s panTro5.chr3 201998996 803 - 202621043 cttcctcatacca-taacccctaataacc-actgatctgttctccatcactacat-ttcatcatatttaggcttttaaataaatagaatcacacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgcttattcattcattcattgaacgacaattgagtttttccagattagggctattacaaataaagttcctatgcattttagtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttctatgtcatgtgataaagatatggttaactttataaaagactgccaaactgcttttcagaataaatgtatcgatttacattcccaccaccaatgcaggagagatccagttgttccacatatttatcagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagcg--------gcatgttattgtagctttactttgcttttctctaatagctaatgatattgcatcAAAAACCTTTTAAACCTTTAAAAATGATATTATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATGTAACGAGATGTCCAGGAATGAAagactaaggaacaactgagagtagggacacaagtcaggatgttcagctataggccagagaatagatgaagtttgcctgaagtaaagt----attgacaaaaggcaaggag i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767033 803 - 205426864 cttcctcatacca-taacccctaataacc-acagatctgttctccatcactacat-ttcatcatatttaggcttttaaataaatagaatcacacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgcttattcattcattcattgaacgacaattgagtttttccagattagggctattacaaacaaagttcctatgcattttagtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttctatgtcatgtgataaagatatggttaactttacaaaagactgccaaactgcttttcagaataaatgtatcgatttacattcccactaccaatgcaggagagatccagttgttccacatatttatcagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagcg--------gcatgttattgtagctttactttgcttttctctaatagctaatgatattgcatcAAAAACCTTTTAAACCTTTAAAAATGATATTATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATGTAACGAGATGTCCAGGAATGAAagactaaggaacaactgagagtagggacacaagtcaggatgttcagctataggccagagaatagatgaagtttgcctgaagtaaagt----attgacaaaaggcaaggag i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67585972 803 + 86207423 cttcctcatacca-taacccctaataacc-actgatgttttctccgtcactacat-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttagc-------ctc--aatatatattcaagttattgtgtctattaatagcttattc--tttttcatttctgaatagtattctgtcgttatgatgtaccacagtttgtttattcattcattcattgaaggacaattgagtttttccagattagggctattacaaattaagttcctatgcattttagtgttctggtt-ttttgtgaatgt-aagtttccatttctctgagataaacactaaagattgtgatttctatgtcatgtgataaagatatggttaactttataaaagactgccaaagtgtttttcagaatatatgtatcgatttacattcccaccaccaatgcaggagaaatccagttgttccacatatttaccagcactctatattgtcagcatggttttacttttcccattctagtaagtgtatagtg--------gcatgttattgtagctttactttgcttttctctaatggctaatgatattgcatcAAAAACCTTTCAAACCTTTAAAAATGATATGATGATATAATGGGTAGGTAACTTCGGGAACTATGTAGAGAATTTAATGAGATGTCCAGGAATGAAAGATTCAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----attgacaaaaggcaaggag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66066940 801 + 204787373 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaacctttagagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgaa--acagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctatcacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagtaagagagatccagttgttccacatatttaccagcacttgatattgtcggcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcACAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaagag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60998789 803 - 192460366 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagtaagagagatccagttgttccacatatttaccagcacttgatattgtcggcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcACAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaagag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11110755 801 - 17224310 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgctgtaatgatgag--acagtttgtttattcattcattcactaaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagttgttccacatatttaccagcacttgatattgtcggcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcACAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatgttcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagactaaaggcaaggag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17422936 803 - 41321030 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaatactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgTATCAAAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatggtcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64494414 803 - 101219884 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttagactttcatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagtttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagtg--------gcacgttattgtagctttattttgcttttctctaatggctaatgatattgcatcAAAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatattcaactataggccagagactagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 880380 803 - 924385 cttcctcatacca-taatccttaataacc-actgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaaccttttgagat--------aggc-ttttttccca------cttggc-------ctc--aatatatattcaagttattgtgtctattaatagcttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccacagtttgtttattcattcattcactgaaggacagttggatttttccagattaaggctattacaaataaagtttctatgcatttctgtgttctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctgtgtcatgtgataaagatatggttaactttataaaagactgccaaactgttttttagaataaatgtattgatttacattcccaccaccaaagcaagagagatccagtttttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtatatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcAAAAACCTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAAGGAACAACtgagagtagggacacaagtcaggatggtcagctataggccagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6721373 800 - 10587913 cttcctcatacca-taatccttaataacctactgatctgttctccatcactatac-ttcatcatatttaggcttttatataaatagaatcatacagtaagtaagcttttgagat--------aggt-ttttttccca------cttggc-------ctc--aatatacattcaagttattgtgtctattaataccttgttc--tttttcatttctgagtagtattctgttgtaatgatgtaccgca----gtttatttattcattcacggaaggacagttcggttttttcagattagggctgttacaaataaagtttctatgcatttctgtattctggtt-tttcgtgaatgt-aagtttccatttctctgagatcaacactcaagattgtgatttctctgtcatgtgataaagatgtggttaactttataaaagactgccaaactgatttttagaataaatgtatcgatttacattcccaccaccaaagcaggagagatccagttgttccacatatttaccagcacttgatattgtcagcatggttttacttttcccattctagtaagtgtatagtg--------gcatgttattgtagctttattttgcttttctctaatggctaatgatattgcatcAAAAACTTTTTAAACCTATAAAAATGATATGATGATATAATGGGTAGGTAACTTTGGGAACTATGTAGAGAATTTAATGAGATGCCCAGGAATGAAAGATTAgggaacaactgagagtagggatgcaagtcagaatgttcagctataagacagagaatagataaagtttgcctgaagtaaagt----atagacaaaaggcaaggag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46056508 786 - 98464013 cttcctcatacta-taacccctaataaaa-actgatctgttctccatcactacac-ttaatcatatttagggttttatataaatagactcatacagtaagtaacctattgagat--------aggc-ttttttaccc------cttggca---------------------caagttattgtgtctattaatagtttgttc-ttttttcatttctgagtagtattctgctgtaatgatgtaccacagtttgtttattcattcatttattgaaggccagttgggtttttccagattggggctattacaaatacagttcctaagcattttagtgttctgtttattgcatgaatat-aagtttccatttttctgagataaacattcaaggttgttgtttctgtg-tatgtgataaagatatcattaaccttataaaagactgccaagatgtttttcagaataaatgtatcgatttacattcccactaccaatgcaggagagatccagttgttccacatacttaccagcacttgatattgtcagcatggttttacttttgccattcttgttagtgtatactt--------gcatgttattgtagctttacttcacttttctctaatggc----taTATTGCATCAAAAACTGTTT--ACCTATAAAAATGATGTAATGATATAATGGGTAGGTAACTCTGGGAATTATGTAGAGAATTGAATGAGATGTCCAGGGATAGAAGATTAAGGAACAACTGAGAATAGGGATACAAGTCAGGATGTTCAGATATAGGCCAGAGAATA----AAGTTTAGCTGAAATAAAGTATTGATTGACAAAGGGCAAGGAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728098 804 + 27742158 cttcctcatacta-taacctctaataaca-actgatctgttctccatcgctatac-ttaaccatatttgagattttatataaatagactcatacagtaagtaatctattgagat--------aggc-tttttcaccc------cttggcat-atgcctc--aatatttattcaagttattgtgtctattaatagtttgttc-ttttttcatttctgagtagtattctgctgtaatgatgtaccacagtttgtttattcattcatttattgaaggccaattgggtttttctggattagggctattacaaataaagttcctaagcattttagtgttctgtttattgcat-aatgt-aagtttccatttgtctcagataaacactcaagattgttgtttgt----cacatgataaatatattgttaactttataaaagactgccaagatgtttttcagtataaatgtatcgatttacattcccactaccaatgcaggagagatccagttgttccgcatacttatcagcacttgatattgtcagcatggttttacttttgccattctagttagtgtatactt--------gcatgttattgtaactttacttcacttttctctaatggctaattatattgcatcAAAAACTGTTT--ACCTATCAAAATGATGTAATGATGTAATGGGTAGGTAACTCTGGGAATTATGTAGAGAATTGAATGAGATGTCCAGGGATGGAAGATTAAGGAACAACTGAGAATAGGGACACAAGTCAGGATGTTCAGTTATAGGCCAGAGAATA----AAGTTTACCTGAAATAAAGTATTGATTGACAAAGGGCAAGGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 265527 795 - 4835464 CTTCCTTATACTA-TAACCCCTAATAA-----------------CATCACTACAC-TTAATCAcatttagggttttatataaatagactcatacagtaagtaacctattgagat--------aggc-ttttttaccc------cttggcataatgcctc--aatatatattcaagttatcgtgtctattagtagtttgtgctttttttcatttctgagtagtattctgctgtaatgatgtaccacagtttgtttattcattcatttattgaaggccaattgggtttttccagattagggctattacaaataaagttcctaggcattttagtgttctgtttattgcatgaatgt-aagtttccatttgtctgagataaacactcaagattgttgtttctgtgtcatgtgataaagatatcgttaatcttataaaagactgccaagatgtttttcagaataaatgtatctatttacattcccactaccaatgcaggagagatccagttgttccacatacttaccagcacttgatattgttaccatggttttacttttgccatattagttagcgtatactt--------gcatgttattgtagctttacttcatttttctctaatggctaattatattgcatcGAAAACTGTTT--ACCTATAAAAatgatgtaatgatgtaatggataggtaactctgggaattctgtagagaattgaatgagatatccagggatggaagattaaggaacaattgagaatagggacacaagtcaggatgttcagttataggccagagaata----aagtttacctgaagtaaagtactgattgacaaagggcaaggag i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3724439 806 + 4093027 cttcctcatacta-taacgcctaataaca-actgatctgttctccatcactacac-ttaatcatatctagagttttatataaatagacttatacagtaagtaacctattgagat--------aggc-ttttttaccc------cttggcaaaatgcctcaaaatatatattctagttattgtgtctattaatagtttgttc-ttttttcatttctgagtagtattctgctgtaataatataccacagtttgtttattcattcatttattgaaggccaattgggtttttccagattagggctattacaaataaagttcctaagcattttagtgttctgtttattgcatgaatgt-aagtttccatttgtctgagataaacactcaagattcttgtttctgtgtcatgtgataaagatatcgttaaccttataaaagactgccaagatgtttttcagaataaatatatcgatttacattcccactaccaatgcaggagagatccagttgttccacgtacttaccagcacttgatattgtcagcatggttttacttttgccattctagttagtgtatactt--------gcatgttat------tttacttcacttttctctaatggctaactatattgcatcAAAAACTGTTT--ACCTATAAAAATGATGTAATGATATAATGGGTAGGTAactctgggaattatgtagagaattgaatgagatgtccagggatggaagattaaggaacaactgagaatagggatacaagtcaggatgttcagatataggccagagaata----aagtttacctgaaataaagtattgattgacaaagggcagggag i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45775436 781 - 149736546 ccccccccaacca-cagtccc-agcaacc-acccttctattct-tatcaccacaagtttgctatactgagactgtcaca-gagtggaatcatatgttaaatagacttgttagattaaaggtaaggt-atatttaacataaaattttggc-------ttc----------ttcta--tgttgtatattttagcagtttattc--tctttgatgcccacatagtattatattgtagtgatg-----------gttcactt-----ttcaatgaaagacagttctgtagttctggcttagagctattacaaatagagctttaaagatatt---tgtccatgtt-tttcacaaaaacaaaagatatagttctctgagataaatactcaggaacttgattgttatgcaattcaataaccagatggctaaatttataaaactatggcaaactattttcaataacatattcctc-atttatattctatttatcaaaataagagtggtgcgattgtcccacccccttgccatcacttggtattgtcaa-agaattctcattttCTCTCTGTAGTAACTGAATGCTGCAGTATCAGCATGCTACTCTTACTTTAATTT-CATTTCTGAAATGGGTAATGATCCTGCACTGAAAATCTTTC-TGTCTATGATTATGGTGTCATGATACAATGAGCAGGT-ACCAAGGGACTTATGCAAAAGTTAAAATGAAATGCATAGAGATAGAAGGCTAAGATAAAATTGAGTTGATGG---CAAATAA--ACTGTTAGATACCTTCAAAGTCTTAAATAGAGATTATTGAAAATATAAC----ACCAACAAAAGGTAA---- i mm10.chr6 I 1335 C 0 s canFam3.chr20 16603348 752 + 58134056 cctcacaaaaccattaatatctagcaatc-actgatcagttctccatcactacag-ttt-tcattttgaaactt--atataaatgga--catataggaagtaagcttttgagac--------tggctttttttttca------cttagc-------ata-------atgcctaagtcatagtgtgtatcagtag----ttc--ctttttattgttaagaagtattctgttgtcatgatgtgacaca----gtttacctattcacccactgaatgcaaattctgttgtttcagtttggggctg---------------ctatgaatttttgtgtacaggtttttgcgtgaatgt-aagttt-tatttcttt-agataaatacccaagggtataactgct-tgtcat-tggtcaatgtattattaactttgtagaagactgccaaactatttttcagaatggatgtgtcagcttacattcccaccagcaacacagaggagattccactgtttcacatccttgccagcacttggtattgccagtatg-------tctttccattctaataaatgtgtagca--------gtatgttattgtgggtttaatttgcatttccctaatagctagtgaGCTTGCATTGGAAGCCTTT----------AATGTGATGTCACAATATAAAGGAAAAGTAACTTGGGGAACTATGTAGATAATAGAATGAAATATCCAGGGATGTAAGGTTAAGGAAGAACAGAGGATGGGGAGATAAGTCAGGATGATCAGATATAGTCCAGGTAAAAGATAAAAGTTACCGAAAAGAAAGC----ATTTACTAAGGGCAAAGAG i canFam3.chr20 C 0 I 190 s dasNov3.JH563077 1848114 765 - 2187301 ctctccccaacca-tagcccctattaacc-agaggtctggtctccatcactataaatttgccactttgaagattttgtttaaatggaatcataccctaagtaaacacttgagat--------tgac-ttttt---cc------tatagcataatgcctt--gagatctagccacatcattgtacatacaaatcatttgttc--cttttcattgctgaata----tgttgtgtgtggatagactata--------atttatttgcccactaaaagacatttaggttttcccag----------ttacagataaaactgctatgaacatttgtgtacaggtttttatgtgaacct-aagttttcatttctctgagaaaaacacccaag--tgtgattagtgggtcat---ttaaacatacacgta--tgtgtaaaacaccgcctaaagattttacagagta----taccaatttgcattccaatga-caatctaggtaagatcccgttggaccacatccttgtcagcacttggtattgtcagtgttttttttttcttcccattttaataaatatctagta--------ttatctcatttgctttttaaatttgttttttc------ctaatgATATTGTGGGGGAAACCTTTT-AATCTATAAACATGACATCAGGAAATAATGGGAATGTAACTCTGGGAATTATAGAGAGGAAAGAATGGAACATACAAAGATGGAAGGCTAACGAACAACtgaaggtagggagataaatcagtatattctgatacagtgtagataacagataatgtttacagaaaatagagt----attgacaaaagaaaag--- i dasNov3.JH563077 C 0 C 0 e otoGar3.GL873534 11068780 160 + 30473821 I a score=1250994.000000 s hg38.chr14_KI270725v1_random 5276 142 + 172810 acgagaggagaggttggatttgagaagcatttggaagtcgattcaaaaggatttaatgaacagtttattgtgggaatgaaaaaaggaagttgtccatgtcaattcttaggttttaagcttcaaaaaa-gtatgtagataatgg s panTro5.chr3 201999799 142 - 202621043 acgagaggagaggttggatttgagaagcatttggaagtcgattccaaaggatttaatgaacagtttattgtgggaatgaaaaaaggaagttgtccatgtcagttcttaggttttaagcttcaaaaaa-gtatgtagataatgg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767836 142 - 205426864 acgagaggagaggtcggatttgagaagcatttggaagtcgattcaaaaggatttaatgaacagtttattgtgggaatgaaaaaaggaagttgtccatgtcagttcttaggttttaagcttcaaaaaa-gtatgtagataatgg i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586775 141 + 86207423 acgagaggagaggttagatttgagaagcatttggaagttgattcaaaaggatttaatgaacagtttattgtgggaatgaaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atgg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067741 141 + 204787373 acgagaggagaggttggatttgagaagaatttggaagtcgattcaataggatttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999592 141 - 192460366 acgagaggagaggttggatttgagaagaatttggaagtcgattcaataggatttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111556 141 - 17224310 acgagaggagaggttggatttgagaagaatttggaagtcgattcaataggatttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423739 141 - 41321030 acgagaggagaggtcggatttgagaagaatttggaagtcgattcaataggatttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495217 141 - 101219884 acgagaggagaggttggatttgagaagaatttggaagtcgattcaataggatttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagcttcaaaaaa-gtatgtagat-atga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881183 141 - 924385 acgagaggagaggttggatttgagaagaatttggaagtcgattcaacaggatttaatgaagagtttattgttggaatggaaaaaggaagttgtcaatggcaattcttaggttttaagtttcaaaaaa-gtatgtagat-atga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722173 141 - 10587913 atgagaggagaggttggatttgagaagcatttggaagtcaattcaaaaagatttaatgaagaatttattgtgggaataagaaaaggaagttgtcaatggcaattcttaaggtataagcttcaaaaaa-gtatgtagat-atgg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057294 140 - 98464013 ACGAGAGGAGAGTTTGGATTTGAGAGGCATTTGGAAGTCAATTTAAAAGGATTTCATAATCAGTTTATTGTGAGAATGTAAAAA-GAAGTTTTCAATAGTAATTCTTAGGGTTTAAGCTTCAAAAGA-GCATGTAGAT-ATGG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27728902 139 + 27742158 ACAAAAGGAAAGTTTGGATTTGAGAAGCATTTGGAAGTCAATTTAAAAGGATTTCATGATCAGTTTATTGTGGGAATGAAAAAA-GGAGTTTTCATTGGTAATTCTTAGGGTTTAAACTTCAAAAGA-GCATGTAGAT-AT-G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266322 140 - 4835464 acgagaggagagtttggatttgagaagcatttggaagtcaatttaaaaggatttcttgatcagtttattgtgggaatgaaaaaa-gaagttgtcagtggtaattcttagggtttaagcttcaaaaga-gcatgtagat-atgg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725245 140 + 4093027 acgagaggagagtttggatttgagaagcatttggaagtcaatttaaaaggatttcatgatcagtttattgtgggaatgaaaaaa-gaaattgtcaatagtaattcttagggtttaagcttcaaaaaa-gcatgtagat-atgg i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776217 120 - 149736546 -----AGGAGA---CAGATTTGATAAGCA-TTGAAAGTAGGGTCAAATGCATGTGCTAAACAATTAATTACATCAGTAATCAAAGGGAAGAATCAGTG---AGCCAAAGGTGAGAAACTTGAATTAA-A----------ATAC i mm10.chr6 C 0 C 0 s canFam3.chr20 16604290 117 + 58134056 AAGAGAGAAGAGATAAGATTTGAGAAGTATTTGAAAGTAGACTCAAAAAGAT---------------TTGTGGGAATGAGTAACAGAAACAGTCAATGGTAACTC----GTTTTAAGCTGGAAATA------GTGGAT-ACAG i canFam3.chr20 I 190 C 0 s dasNov3.JH563077 1848879 124 - 2187301 --gataaaggaggtcagatttgaaaagcatttaaaagtagagtcaaaatgacttgataaccaattcattgtgagaatgtaaaaA-----------CCAGTAATTCTGAAGTTTTTCTCTTAAAAGGATACATACTGA------ i dasNov3.JH563077 C 0 I 437 e otoGar3.GL873534 11068780 160 + 30473821 I a score=2526835.000000 s hg38.chr14_KI270725v1_random 5418 269 + 172810 ctatagtaatcaaaattaagaataatagagggaa--atagttt-gaagagaggaaatgat----aga----tatttttggccatattaaaactgaggtatctacaggacataccaaAATATCTAAC----TCAG----------TAGG-AAAAATATTATTCAGAAAGGACATTTGGTTT-ATGAAGAATAAAGACCTATTGGATTAAGTGGAATGTTTTACTTAAAAGTAGTTTCCTACTCTTTTCAGGAATATTATTGGCAATTAATCTTTGA-CCTCTAAGCCAGTTCACATTA s panTro5.chr3 201999941 269 - 202621043 ctatagtaatcaaaattaagaataacagagggaa--atagttt-gaagagaggaaatgat----aga----tatttttggccatattaaaattgaggtatctacaggacataccaaAATATCTAAC----TGAG----------TAGG-AAAAATATTATTCAGAAAGGACATTTGGTTT-ATGAAGAATAAAGACCTATTGGATTAAGTGGAATGTTTTACTTAGAAGTAGTTCCCTACTCTTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGTTCACATTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204767978 268 - 205426864 ctatagtaatcaaaattaagaataacagagggaa--atagttt-gaagagaggaaatgat----aga----tatttttggccatattaaaattgaggtatctacaggacataccaaAATATCTACC----TGAG----------TAGG-AAAAATATTATTCAGACGGGACATTTGGTGT-ATGAAGAATGAAGACCTATTGGATTAAGTGGAGTGTTTTACCCACAAGTAG-CCCCTACTCTTTCCAGGAATACTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGTTCACATTA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67586916 269 + 86207423 ctatagtaatcaaaattaagaataatagagggaa--atagttt-gaagagaggaaatgat----aga----tatttttggccatattaaaattgaggtatccacaggacataccaaAATATCTAAC----TGAG----------TAGG-AAAAATATTATTCAGAAAGGACATTTGGTTC-ATGAAGAACAAAGACCTATTGGATTAAGTGGAATGTTTTACTTAAAATTAGTTTCCTACTCTTCTCAGGAATATTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGTTCACATTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66067882 274 + 204787373 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggagaggggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgag----------tagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATGAAGAACAAAGACCTATTGAATTAAGTGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCCTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 60999733 274 - 192460366 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggagagaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgag----------tagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATGAAGAACAAAGACCTATTGAATTAAGTGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCCTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111697 274 - 17224310 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggagagaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgag----------tagg-AAAAATATTATTCAAAAAGGACCTTTGGTTTCATGAAGAACAAAGACCTACTGAATTAAGTGGAAAGTTTTACTTAAAATTAGTTTCCTAGTCCTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17423880 274 - 41321030 ctatagcaatcaaaattaagaataatagaggaaa--attgttt-ggagagaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgag----------tagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATGAAGAACAAAGACCTATTGAATTAAGCGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCTTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495358 274 - 101219884 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggagagaggaaatgat----agagaggtatttttggccatattaaaattgcggtatctaaagaacataccaaAATATCTAAT----TGAG----------TAGG-AAAAATATTATTCAAAAAGGACATTTGGTTTCATGAAGAACAAAGACCTACTGGATTAAGTGGAAAGTTTTACTTAAAACTAGTTTCCTAGCCTTTTCAGGAATATTAATGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881324 274 - 924385 ctatagcaatcaaaattaagaataatagaggaaa--atggttt-ggagagaggaaatgat----agagaggtatttttggccatattaaaattgaggtatctaaagaacataccaaaatatctgat----tgag----------tagg-AAAAATATTATTCAAAAAGGACATTTGGTTTCATGAAGAACAAAGACCTATTGAATTAAGCGGAAAGTTTTACTTAAAATTAGTTTCCTAGCCTTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTGTAAGCCAGTTCACATTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722314 274 - 10587913 ctatagtaatcaaaattaagaataatagaggaaa--atagttt-ggagagaggagatgat----agagaggtatttttgaccatattaaaactgaggtatctaaagaacataccaaACTATCTAAC----TGAG----------TAGG-AAAAATATTATTCAAAAAGGACATTTGGTTTAATGAGGAATAAAGACCTATTGGATTAAGTGGAAAGTTTTACTTAAAATTAATTTCCTAGCATTTTCAGGAATATTATTGGCAATTAATCTCTGA-CCTCTAAGCCAGCTCACACTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057434 271 - 98464013 ATATAGCAATCAAAATTTAAAATAATAGAGAAAAAAACTGTTT-GGAGAGAGGAAATGAT----AGA----TATTTTTGGCTATACTAAAATTGAGGTATCTACAGGACATATCAAAATACCTAAC----TGAG----------TAGGAAAAAATATTATTCAAAAA-GACATTTGGTATGATGAAGAACAAAGACTTATTGGATTAGGTGGAATG-TTTACTTGAAATTATTTTTTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGCCAGTTCACATTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729041 270 + 27742158 ATATAGCAATCGAAATTAGAAATAATAGAGAAAAAGACCATTT-GGAGAGAGGAAATGAT----AGA----TATTTTTGGCTATATTAAAATTGAGGTATCTACAGGACATACTAAAATACCTAAC----CCTG----------TAGG-AAAAATATTATTCAAAAA-CACATTTGGTATAACGAAGAACGAAGACCTATTGGATTCCGTGGAATG-TTTACTTGAAATTATTTTCTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGCCAGTTCACATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266462 274 - 4835464 atatagcaatcaaaattaaaaataatagagaaaaaaacagttt-ggagtcaggaaatgatagagaga----tatttttggctatattaaaattgaggtatctacaggacatACTAAAATACCTAAC----CTTG----------TCGG-AAAAATATTATTCAAAAA-GACATTTGGTATGATAAAGAACAAAGACCTATTGGATTAGGTAGAATG-TTTACTTGAAATTATTTTCTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGTCAGTTCACATTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725385 270 + 4093027 atatagcaatcaaaattaaaaataatagagaaaaaaacagttt-ggagagaggaaatgat----aga----gatttttggctatattaaaattgaggtatctacaggacataccaaAATACCTAAC----TGAG----------TAGG-AAAAATATTATTCAAAAA-GACATTTGGCATGATGAAGAACAAAGACTTATTGGATTAGGTGGAATG-TTTACTTGAAATTATTTTCTTAGCCTTTTCAGGAATATTATTGGCAATTAATATCTGA-CCTCTAAGCCAGTTCACATTA i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45776337 226 - 149736546 ATACAGTAG---------------------------AGATCTT-GGACAGAAAAAGGCAT----TGG---------------------------AAATATATAAGGAACAATAAACTCTGTCTAAC----TCAGGCTAATTATATGGA-GAGAATAGCACTTAAAATAAGCACCTGCTTC-ATAAAGAACAGAGAACTTGTGAATTAAATGGAACAATTTGCTTGTAAGTATTTT----GTCTTTTTTCAAAATTTGCTAGCAACTGACCTCTGA-TTTGCAAAAGACTT-ACATTG i mm10.chr6 C 0 C 0 s canFam3.chr20 16604407 271 + 58134056 ATATAGTAA-CAAAATTAAAAATAATGGAGGGAAA-ACAGTTTGGGAAAGAGAGAGATTT----GGAGAGACTTTTTTGGCCATATTGAAATTGAGGTATCTATAGAGGATACCAAAATATTTGGC----TGAG----------TGGGGAGAAACATTACTCCAAATGAACATTTGGTGTCACCAAGAGCAAAGACCCGTTGTAGTAAGTGGGATATTTTGCTTAAAATCACTGTCATAGCTTTTTTAGCGATACTGTTGGCAATTATTT------CTCTTAGACCAGTTCACACGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1849440 272 - 2187301 CTGCAATGACCAAAACTCAGAAAAATAGAGGAGAA-ACAGTTT-AGAGGGGAAAAAGTTT----GAA---ATATATTTGGTCATATTAAAATTGAGGTACCTGTAGGGTGTACCAAAATATCCAACAAAATGAG----------TGGGGAGAAATATCATTCAAAATGTATATTTGGTATCATAAA-----AAGACTT-TTGGACTAAGTGAAGAATTTTGTTTTAAATCATTTCCACAGTCCTTTTAGGAACACTGTTGGCAATTAATCTCTGACCCTTTAGACCAGCACACATTA i dasNov3.JH563077 I 437 C 0 e otoGar3.GL873534 11068780 160 + 30473821 I a score=117289.000000 s hg38.chr14_KI270725v1_random 5687 10 + 172810 -AAAATAAGAC s panTro5.chr3 202000210 10 - 202621043 -AAAATAAGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768246 10 - 205426864 -AAAATAAGAC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587185 10 + 86207423 -AAAATAAGAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068156 10 + 204787373 -AAAATAAGAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000007 10 - 192460366 -AAAATAAGAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111971 10 - 17224310 -AAAATAAGAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424154 10 - 41321030 -AAAATAAGAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495632 10 - 101219884 -AAAATAAGAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881598 10 - 924385 -AAAATAAGAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722588 10 - 10587913 -AAAATAAGAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057705 10 - 98464013 -AAATTAAGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729311 10 + 27742158 -AAATTCAGAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266736 10 - 4835464 -AAATTCAGAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725655 10 + 4093027 -AAATTAAGAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11068940 10 + 30473821 -aaaaTAAGAC i otoGar3.GL873534 I 160 C 0 s mm10.chr6 45776563 10 - 149736546 -GAAGTAAGAG i mm10.chr6 C 0 I 162 s canFam3.chr20 16604678 10 + 58134056 -AAAGGAAGAC i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1849712 11 - 2187301 GAAACAAGGAC i dasNov3.JH563077 C 0 C 0 a score=1490508.000000 s hg38.chr14_KI270725v1_random 5697 148 + 172810 CACACCAAAAGACATTTTAGATTGAGAAACTAATGTGAACAATTCATG---------GGGAGAAAATTGAAATATGGCAATAGTCTATTGTACAGCTGTCTTGAAGGGGAATTTGAAGGCCA-TAACTGTCGAAGGATTTTCCTAAC-TTACAGAAGCC s panTro5.chr3 202000220 148 - 202621043 CACGCCAAAAGACATTTTAGATTGAGAAACTAATGTGAACAATTCATG---------GGGAGAAAATTGAAATATGGCAATAGTCTATTGTACAGCTGTCTTGAAGGGGAATTTGAAGGCCA-TAACAGTGGAAGGATTTTCCTAAC-TTACAGAAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768256 148 - 205426864 CACGCCAAAAGGCATTTCAGGTTGAGAAACTAATGTGAACAATTCATG---------GGGAGAAAATTGAAATACGGCAATAGTCTATTGTACAGCTGTCTTGAAGGGGAATTTGAAGGCCA-TAACTGTGGAAGGATTTTCCTAAC-TTACAGAAGCC i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587195 148 + 86207423 CACACCAAAAGACATTTTAGGTTGAGAAACTAATGTGAATAATTCATG---------GGGAGAAAATTGAAATATGGCAATAGCCTATTGTACAGCTGTCTTGAAGGGGAATTCGAAGGCCA-TAACTATCGAAGGATTTTCCTAAC-TTACAGAAGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068166 148 + 204787373 CACACCAAAAGACATTTTTGGTTGAGAAACTCATGTGAATAGTTCATG---------GGGAGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCCTAAC-TTACAGAAGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000017 148 - 192460366 CACACCAAAAGACATTTTTGGTTGAGAAACTCATGTGAATAGTTCATG---------GGGAGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATTGAAAGATTTTCCTAAC-TTACAGAAGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11111981 148 - 17224310 CACACCAAAAGACATTTTTGGTTGAGAAACTCATGTGAATAGTTCATG---------GGGAGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCCTAAC-TTACAGAAGCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424164 148 - 41321030 CACACCAAAAGACATTTTTGGTTGAGAAACTAATGTGAATAGTTCATG---------AGGAGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCCTAAC-TTACAGAAGCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495642 146 - 101219884 CACACCAAAAGACATTTTAGGTTGAGAAACTAATGTGAATAGTTCATG---------GGGAGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATC--AAGATTTTCCTAAC-TTACAGAAGCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881608 148 - 924385 CACACCAAAAGACATTTTTGGTTGAGAAACTAATGTGAATAGTTCATG---------AGGAGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTCTTGAAGGGGAATTTAAAGGCCA-TAACTATCGAAAGATTTTCTCAAC-TTACAGAAGCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722598 148 - 10587913 CACACCAAAAGACATTTTAGGTTGAGAAACTAATGTGAACAATTCATG---------GGGGGAAAATTGAAATATGGCAATAGCCTATCGTACAGCTGTGTTGAAGGGGAATTTAAAGGCCA-TAGCTATCGAAGGATTTTCCTAAC-TGACAGAAGCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057715 149 - 98464013 CACACCAAAAGACATTTTAGGCTGAGAAACTAATGTGAATACTTGTTG---------GGGAGAAAATTGAAATATGGCAATAGCCTATTATACACCCGTCTTAAAGGAAAATTTGAAGGCCAATAAGTATCCAAGGATTTTCCTCAC-TTACAGAAGCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729321 148 + 27742158 CACACCAAAAGACGTTTTAGGTTGAGAAACT-TTGTGAATAATTGTTG---------GGGAGACAATTGAAATATGACAATAGCCTATTATACACCTCTCTTGAAGGAGAATTTGAAGGCCAATAAGTATTGAAGGATTTTTCTCAC-TTGCAGAAGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266746 148 - 4835464 CGCACCAAAAGACGTTTTAGGTTGAGATACT-ATGTGAATAATTGTTG---------GGGAGAAAATTGAAATATGACAATAGCCTATTATACACCTCTCCTGGAGGAGAAATTGAAGACCAATAAGTATTGAAAGATTTTTCTCAC-TTACAGAAGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725665 149 + 4093027 CACACCAAAAGACATTTTAGGTTTAGAAACTAATGTGAATAATTGTTG---------GGGAGAAAATTGAAATATGACAATAGCCTATTATACACCTGTCTTGAAGAAGAATTTGAAGGCCAGTAAGTATCGAAGGATTTTCCTCAC-TTACAGAAGCC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11068950 150 + 30473821 CAAATCAAAGGACATTTTAGGTTGAAAGACTAAGATGAACACTTCTTGA--------AGAAAAAAACTGAAATATGGTGATAACCTACTATATAGCTATTTTGGGGGAGAATTAGAAAGCCAATAACAAGTGGAAAGTTTTTCCAAT-TTACAGAAGCC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16604690 141 + 58134056 AATCTCAAAATCCATTTT-GGTTTAGGAGGTGATATGAACCAATCTTA---------GGGAGAAAATT--------ATAATAGCCTACTATATTGTTACTTTGAAGGGGAATTAGAAAGCCAATAATTAATGGAGAGTTTTCCCAAAGTTATAGAAGAC i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1849723 156 - 2187301 CAAGTCAAGGGCCATTTTAGACTGAAGAACTAATGTGAACAATTCTTGGGAGGTGGTGGGGGAGAACTGTACTATGACAATATCCTATTGTGTAGCTCCCTTGAAGGGGAATTAGAAGTCTA-TAATTATTGGAGGGTTTT-CAGAT-TTACTTAATCC i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45776573 162 - 149736546 I a score=1359304.000000 s hg38.chr14_KI270725v1_random 5845 168 + 172810 TG-----TGTACACTACCA--------------------GAAGAAT---TGATG---TTTGCAAT--------TCCACCCACTGTGTACTTTTTCATG-ATGAGAGAAATCATTCAGGACAACGCAGTTAGC-AAACCATAACTCAAAATCGATAGAC-CCCC---ACCCCCCGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TA s panTro5.chr3 202000368 168 - 202621043 TG-----TGTACACTACCA--------------------GAAGAAT---TGATG---TTTGCAGT--------TCCACCCACTGTGTACTTTTTCATG-ATCAGAGAAATCATTCAGGACAACGCAGTTAGC-AAACCATAACTCAAAATCGATAGAT-CCCC---ACCCCCCGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768404 171 - 205426864 TG-----TGCACACTACCA--------------------GAAGAAT---TGATG---TGTGCAGT--------TCCACCCACTGTGTACTTTTTCATG-ATCAGAGAAATCATTCAGGACAACGCAGTTAGC-AAACCATAACTCAAAATCGATAGAC-CCCCCCGCCCCCCCGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587343 169 + 86207423 TG-----TGTACACTACCA--------------------GAAGAAT---TGATG---TTTGCAAT--------TCCACCCACTGTGTACTTTTTCATT-ATCAGAGAAATCATTCAGGACAACGCAGTTAGC-AAATCATAACTCAAAATCGATAGCCGCCCC---CCACCCCGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068314 165 + 204787373 TG-----TGTACACTACCA--------------------GAAGAAC---TGATG---TTTGCAAT--------TCCACCCACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCAAAGATGATA----CCCA---CTTCCCTGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000165 165 - 192460366 TG-----TGTACACTACCA--------------------GAAGAAC---TGATG---TTTGCAAT--------TCCACCCACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCATAGATGATA----CCCA---CTTCCCTGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112129 165 - 17224310 TG-----TGTACACTACCA--------------------GAAGAAC---TGATG---TTTGCAAT--------TCCACCCACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCAAAGATGATA----CCCA---CTTCCCTGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424312 165 - 41321030 TG-----TGTACACTACCA--------------------GAAGAAC---TTATG---TTTGCAAT--------TCCACCCACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCAAAGATGATA----CCCA---CTTCCCTGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495788 165 - 101219884 TG-----TGTACACTACCA--------------------GAAGAAC---TGATG---TTTGCAAT--------TCCACCCACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCAAAGATCATA----CCCA---CTTCCCTGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--TG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881756 165 - 924385 TG-----TGTACACTACCA--------------------GAAGAAC---TTATG---TTTGCAAT--------TCCACCCACTGTGCACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCAAAGCTGATA----CCCA---CTTCCCTGCATTTTTGTTATTTCATGATAAGATAATGGCAATATA--CG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722746 165 - 10587913 TG-----TGTACACTACCA--------------------GAAGAAC---TGATG---TTTGCAAT--------TCCACCCACTGTGTACCTCTTCATG-ATTAGAGAAATCATTCAGGACAATGCAGTTAGC-AAATCATAACTCAAAGATGATA----CCCA---CTTCCCCGCATTTTTGTTATTTCATGACAAGATAATGGCAATATA--TG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46057864 160 - 98464013 TG-----TGTACACTGCC-----------------------TGAAT---TGATG---TTGTCAAT--------TCCATTCATTGTGTACTTTTTCTTG-ATCACAGAAATCATTCAGGACAATGTAGTTAGC-AAATCATATCTAGAAAATGATAGCC-CCCG--------CTGCATTTTTGTTGTTTTATGATAAGATAATGGCAATATA--TA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729469 160 + 27742158 TG-----CGTACACTACC-----------------------AGAAT---TGATG---TTTGCAAT--------TCCATTCACTGTGTACTTTTTCTTG-ATCACAGAAATCATTCAGGACAATGTAGTTAGC-AAATCATACCTAGAAAATGATAGCC-CCTG--------CTGCATTTTTGTTGTTTTATGATAAGATAATGGCAATATC--TA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 266894 159 - 4835464 TG-----TGTACACTACC-----------------------AGAAT---TGATG---CTTGCAAT--------TCCATTTACTGTGTAGTTTTTCTTG-ATCACATAAATCATTCAGGACAATGTACTTAGC-AAATCATATCTAGAAAATGATAGCC-CCCA--------CTGCATTTTTGTTG-TGTATGATAAGATAATGGCAATATG--TA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725814 158 + 4093027 TG-----TGTACACTACC-----------------------AGAAT---TGATG---TTTGCAAT--------TCCATTCAC--TGTACTTTTTCTTG-ATCACAGAAATCATTCAGGACAATGTAGTTAGC-AAATCATATCTAGAAAACGATAGCC-CCCA--------CTGCATTTTTGTTGTTTTATGATAAAGTAATGGCAATGTA--TA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069100 170 + 30473821 TGCCTATTCTACCCTACCA--------------------AAGGAAC---AGAAGACATTTTCAAT--------TCTACCCACTGTGCTCATTTTCATG-ATTGGGGAAGTCATCTGAGAGAGC-TGATTAGC-ATATCACATCTCAAAAGCTATAGTC-CCTC--------CTGCATTTTCATTTTTTCAATATAAGATAATGACTACATA--TC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776735 173 - 149736546 TG-----TGCACAATACTAACAATGCACTGTTGAGTTTTGTGGGGT---TTTTG---TTTGTTTTTGTGTTTGTTTcccagttatttgctcctttattcattagggtattggttcacaaga----agtcacc-tgagtatgactca-------------ctct-------------ttgttcacagtccctcctaggagagtggaattagcatca i mm10.chr6 I 162 C 0 s canFam3.chr20 16604831 159 + 58134056 TG-----GGAACTCTATTA--------------------AAAGAATAGATGACG---TTTGCATT--------TCCACTCAC-ATGT-TCTTTTCATG-ATTAGAAGAATCATTTAAGACCACAAATTTAGCAAAATCACACCTCAAAAGCTGTTGCT-ACCA--------CAGCATTTT------TTCAATGTAAGAAAATGATTTtata--ta i canFam3.chr20 C 0 I 196 s dasNov3.JH563077 1849879 151 - 2187301 TG-----GCTAATTTGTCA--------------------AAAGAAC---CAAAGACATTTGCAAT--------TTCACCAA--ATATACTTTTTCAAG-ATTGGAGaaataa--aaaaataat--aatttaC-AAATCATATCTGAAAAACTATAGTA-CCCA--------CTATACTTCTATTTCTTCATTAACAGATA-TGCT---------- i dasNov3.JH563077 C 0 C 0 a score=6053885.000000 s hg38.chr14_KI270725v1_random 6013 575 + 172810 -AAATAAGCATAATAC---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTAACATATATTATTTTAT---TCAA---CCCT----AAACATCCTCTATTATAACTTGGTGAGAAAA---GCAGTAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACACGCGGTATGGATGACC---TTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTACTGGTATATCTGCTTGAATCACAAACACATGATTATAAGGCAAATGTAATCCATATCTATGT-TGTT-----AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATGGGAAAAAAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTTACCACTTTTTATA----CTCAAGAAAATA s panTro5.chr3 202000536 575 - 202621043 -AAATAAGCATAATAC---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTAACATATATTATTTTAT---TCAA---CCCT----AAACATCCTCTATTATAACTTGGTGAGAAAA---GTAGTAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACACGTGGTATGGATGACC---TTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTACTGGTATATCTGCTTGCATCACAAACACATGATTATAAGGCAAATGTAATCCATATTTATGT-TGTT-----AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTTACCACTTTTTATA----CTCAAGAAAATA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204768575 575 - 205426864 -AAATAAGCATAATAC---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTAACATATATTATTTTAT---TCAA---CCCT----AAACATCCTCTATTATAACTTGGTGAGAAAA---GTAGTAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACACGCGGTATGGATGACC---TTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTACTGGTATATCTGCTTGCATCACAAACACATGATTATAAGGCAAATGTAATCCATATTTATGT-TGTT-----AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTTACCACTTTTTATA----CTCAAGAAAATA i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67587512 578 + 86207423 -AAATAAGTA---------TAATAGTATATA-AACCATAAAGTAAAAAAGTAAAATGTTTAACATATATTATTTTAT---CCAA---CCCT----AAATATCTTCTATTATAACTTGATGAGAAAA---GTAGTAACATCTCCATGTTAAATTCT-AAAGAACCTTCA-AACTAGAATAAATGCAAAGAACATGACACGCGGTATGGATGACC---TTTTTTT--CTGA----AAA--TAGCTTAAATTCCTTTCGCCTATACCAGTATTAGACTGAGAAATGGAGTCTCTCCTCAGAACCATCTAAGTACTGGTATATCTGCTTGAATCACAAACACATGATTATAAGGCAAATGTAATCCATATTTATGT-TGTT---A-AAAAAAGATTAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCCACTAAAGTTGAAAGACATGGAATATTCATATAAGTGGAGTACA-TTTTACCACTTTTTATA----CTCAAGAAAATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66068479 576 + 204787373 -TAATAAGTATATTAA---TAATAGTATATA-AACCAT--------AAAGTAaaatgtttaacatacattattttat---ccaa---ccct----aaacatcctctattataacctggtgagaaaa---gtagcaacatctccatgttaaatatt-aaagaaactTCA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC--TTTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATAAGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATTTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGTAAATGTAATCCATATTTACGT-TCTT---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTCACCACTTTTAATA----CTCAAGAAAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000330 577 - 192460366 -TAATAAGTATATTAA---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTAACATACATTATTTTAT---CCAA---CCCT----AAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAAACTTCA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC-TTTTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATAAGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATTTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGTAAATGTAATCCATATTTACGT-TCTT---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCTTATAAATGGAGTATA-TTTCACCACTTTTAATA----CTCAAGAAAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112294 577 - 17224310 -TAATAAGTATATTAA---TAATAGTATATA-AACCAT--------AAAGTAaaatgtttaacatacattattttat---ccaa---ccct----aaacatcctctattacaacctggtgagaaaa---gtagcaacatctccatgttaaatatt-aaagaaactTCA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC-TTTTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATAAGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATTTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGTAAATGTAATCCATATTTACGT-TCTT---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATGCCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTCACCACTTTTAATA----CTCAAGAAAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17424477 575 - 41321030 -TAATAAGTATATTAA---TAATAGTATATA-AACCAT--------AAAGTAaaatgtttaacatacattattttat---ccaa---ccct----aaacatcctctattataacctggtgagaaaa---gtagcaacatctccatgttaaatatt-aaagaaactTTA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC---TTTTATT--CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATACGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTCCTGGTATATCTGCTTGAATCACAAACACATGAGTATAAGGCAAATGTAATCCATATTTACGT-TCTT---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGACTTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTCACCACTTTTAATA----CTCAAGAAAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64495953 575 - 101219884 -AAATAAGTATATTAA---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTAACATACATTATTTTAT---CCAA---CCCT----AAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAAACTTCA-AACTAGAATAAATGCAAAGAACATGACATGTGGTATGGATGATC---TTTTTTT--CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATACGAGTATTAGACTGAGAAATGGAGTGTCTCCTGAGAACCATCTAAGTCCTGGTATATCTGCTTGAATCACAAACACACGAGTATAAGGCAAATGTAATCCATATTTATGT-TGTT---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTATCAATTCCTAAATATGCT-ATAGCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATACAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACCAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTCACCACTTTTGATA----CTTAAGAAAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 881921 574 - 924385 -TAATAAGTATATTAA---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTAACATACATCATTTTAT---CCAA----CCT----AAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAAACTTTA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGATC---TTTTATT--CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATACGAGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATCTAAGTCCTGGTATATCTGCTTGAGTCACAAACACATGAGTATAAGGCAAATGTAATCCATATTTACGT-TCTT---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGACTTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATACCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATACATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTCACCACTTTTAATA----CTCAAGAAAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6722911 576 - 10587913 -AAATAAGCATATTAA---TAATAGTATATA-AACCAT--------AAAGTAAAATGTTTTACATACATTATTTTAT---CCAA---CCCT----AAACATCCTCTATTATAACCTGGTGAGAAAA---GTAGCAACATCTCCATGTTAAATATT-AAAGAACCTTAA-AACTAGAATAAATGCAAAGAACATGACATGCGGTATGGATGACC---TTTTTTT--CTGA----AAA--TAGTTTAAATTCTTTTCCTCTATACGGGTATTAGACTGAGAAATGGAGTCTCTCCTGAGAACCATGTAAGTCCTGGTATATCTACTTGAATCACAAACACATGAGTATAAGGCAAATGTAATCCGAGACTCCGTATCAA---A-AAAAAAGATGAAAATCCATAAAGTACTGTGATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCT-ATAGCAACAAAGAAACAGATGTTTGGTTTTATTCAATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACA-TTTCACCACTTTTAATA----CTCAAGAAAATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058024 576 - 98464013 -AAATAAGCATAATACTAATAATAGTATACA-AACCAT--------AAAGTAAAATCTTTAACATACATTATTTTAT---CTAGTCCTCCT----AAACATCCTCTATTATAATTTGGTGAGAAAA---GT-------TCTTCATTCTAAATATT-AAAAAAACTTAA-AACCAGAATAAATGCAAAGAACATGATACATTGTATGGAAAGCC--ATTTTTTT--CTGA----AAA--TAGTTTAAATTTCTTTCCTTTATATGAGTATTAGACTGCAAAATGGAGTCTCTTTTGAGAACCATCTAAGTCCTGGTATATCTGCTTGACTC-CAAATACATGATTATAAGGTGAACATAATCCATATTTATGT-TGTT---A-AAAAAAGATGAAAATCCATAAAGCACTGTTATCATATTTAGAGAATTTTCAATCAAATGATTCTGTCAATTCCTAAATATGCTGACAGCAACAAAGAGACAGATGTTTGGTTTTATTCCATTGCCAGCGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTACGTTTTTACCACTTTTTATA----CTCAAGAAAATA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27729629 583 + 27742158 -AAATAAGCATAATAC---TAATAGTATATA-AACCAT--------TAAGTAAAATCTTTAACATACATTATTTTAT---CTAATTCTCCT----AAACTTCCTCTAGTATAACTTGGTGAGAAGA---GTAATAACATCTTCATTCTAAATATTAAAAAAAACTTAA-AACCAGAATAAATGCAAAGAACATGACATATTGTATGGAAGGCC--ATTTTTTTTACTGA----AAA--TAGTTTAAATTCCTTTCCTCTATATGAGTATTAGACTGCAAAATGGAGTCTCTCTTGAGAACCATCTAAGTCCTGGTATATCTACTTGACTCACAAATACATGATTATAAGGCAAATGTAATCCATATTTATGT-TGTT---A-AAAAAAGATGAAAATCCATAAAGCACTGTGATCATATTTAGAGAATTTTCAATCAAACGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGAGATATAGAAAAAGAAGGCTATTAATAAGCATACATTCTACTAAAGTTGAAAGACATGGAATATTTATATAAATGGAGTACA-TTTTACCACTTTTTATA----CTCAAGAAAATA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267053 580 - 4835464 -AAATAAGCATAATAC---TAACAGTATATA-AATCAT--------AAAGTAAAATCTTTAACATACATTATTTTAT---CAAATCCTCCT----AAACATCCTCTAGTATAACTTGGTGAGAAAA---GTAATACCATCTTCATTCCAAATATT-AAAAAAAATTAA-AACCAGAATAAATGCAAAGAATATGACACATTGTATGGAAGGCC--ATTTTTTTT-CTGA----AAA--TAGTTTAAATTCCTTTCCTCTATATGAGTATTAGGCTGCAAAATGGAGTCTCTCTTGAGAACCATCTAAGTCCTGGTATATCTGCTTGACTCACAAATACATGATTATAAGGCGAATGTAATCCATATTTATGT-TGTT---A-AAAAAAGATGAAAATCCATAAAGCACTGTGATCGTATTTAGAGAATTTTCAATCAAACGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATG-TTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTTATATAAATGGAGTACA-TTTTACCACTTTTTATA----CTCAAGACAATA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3725972 578 + 4093027 -AAATAAGCATAATAC---TAATAGTATATA-AACCAT--------AAAGT--AATctttaacatgcattattttat---ctaatcctcct----aaacatcctctagtataacttggtgagaaaa---gtaataacatcttcattctaaatatt-aaaaaaacttaa-aaccagaATAAATGCAAAGAACATGACACATTGTATGGAAAGCC--ATTTTTTT--CTGA----AAA--TAGTTTAAATTCTTTTCCTCTATATGAGTATTAGATTGCAAAATGGAGTCTCTTTTGAGAACCATCTAAGTCCTGGTATATCTGCTTGACTCACAAATACATGATTATAAGGCGAATGTAATCCATATTTACGT-TGTT---A-AAGAAAGATGAAAATCCATAAAGCACTGTGATCATATTTAGAGAATTTTCAATCAAACGATTCTGTCAATTCCTAAATATGCTGATAGCAACAAAGAAACAGATGTTTGGTTTTATTCCATTGCCAGTGATATAGGAAAAGAAAGCTATTAATAAGCATAAATTCTACTAAAGTTGAAAGACATGGAATATTCATATAAATGGAGTATA-TTTTACCACTTTTTATA----CTCAAGAAAATA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069270 562 + 30473821 -AGATAAACATAATAC---TAATAGTACATA-AGCCAG--------GAAGTAAAATGTTCAACAT-----ATTTTAT---CTGG---TCCTTGCAAACCATCTGCCATTATATCTTGATGGGAAAAAATATAGTAATATCTCCAATTTAAAGATT-TTAAAACCTTGACAAAGGAAAAAAATGCAAAGCACATCACACAGGATGTGGAAGGTA--ATTTTTTT--CCGACAATAAG--TAGTTCAACATCCTCTCCTCTATAC------TAGATTGAAAAAAGGAGTC----------------TAAGTCCTTGCATATCAGCTTAAACCACAAATGCATGATTAAAGGGCAAATGCAACCCATATTTATGT-TGCT---ATAAAAAAGATAAAAATCTGTAAAGGACTGTGATCATATTTACAGGATCTTCTATCAAACCATTCTGTCAATTTTCAAATATGTG-ATAGCAACAAAGAAACAGATGTCTGGTTTTATTCCTTTGCCAGTGATATAGGAAAGGAAAACTATTAATAAGCATAAATTCTATTAAAGTTGAAAGACATGGAATATTCACATACATGGAATACA-TTTTGCCACATTCTACA----CTCAAGAAAATA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45776908 547 - 149736546 -aaatacaaacagcac---caggcccatccacaacTAT--------GAAGTCAG---------ATACATTGTTTTATCTGCTAA---CTCT----ATATGGCATTCTTTGTAGCTTGGTGGAGAAA---ATAGTACAGTTTTCTTTTT---TGTG-AA-----------AACCAGAAAAGGTGCAAAAATTATGACA-GAGGGATAGAAAAATATTTTTATTT--CTGA----CAA--CAGTTGAACTTTCTTCCATCAAAA-----AATATACTGAGCATCCTAATCTAGCCACAGACCCTTCTGAGTCCTGGCAAATCTACTTGAACCACAAACACATGATTAAAGGGCAAATGTAATCCATATTTATGC-TTCTCAGA-AAAAAAGATGAAAATCTATAAAGCACTGTGATCATATTTAGAAAATTTTCAATCAAACCGTTCTGCCAATTCCTAAATGCGCTGATACCAGCAAAGAAACAGATGTCTCATTGCATTCCTCTGCCAAGGCTG-GGGAGAAGAAAACTGTTCCTAAGCAGAAATTCTGCTGTGCTTGAAAGCTATGGCACACTCAAACAAGTG------A-GTTCCCTACTGTCTAAA----CTCAAG----TA i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1850030 553 - 2187301 ATAATA-GTATAATAA---CAACAGTACATA-AGCCAT--------GAAGTAAAATGACGAacaca---tatttctt---ctgatcctccc----aatcatcctctattctagcttaatggacatg---gtaataatatccccattttaaa-gtt-aagaaaccttga-aaccagaaagAAGGCAAAGCACGTATCA----------------------------CAGG----ACATCTAGTGTAATTTTCTTCCCTCTAAAC------TAAACTGAGTAGAAGAACATCTCCTCAGAACCATCTGAATCCTGGTAAATTTACTTCAACTACAAACACATGATTAAAGGGCAAATGTAATCCATATTTATGC-TGCT---TTAAAAAAAAAAAAAAGATGTAAAGTGCCGTGATCATATTTAGAAAATTTCCAATCAAACCATTCTGCCAATTCCTAAATATGCTGATAGCAGCGAAGAAACAGATGTCTGGTTTCATTCCATTGCCAGTGATATAGAAAGGGAAAACTATTCCTAAGCATAAATTCTCCTGAAGTTGAAAGACTTGGAATATTCATATAAATGGAGTACC-TTTTGCCACTTCTTAAACAACCTCAAGAAAATA i dasNov3.JH563077 C 0 C 0 e canFam3.chr20 16604990 196 + 58134056 I a score=119740.000000 s hg38.chr14_KI270725v1_random 6588 13 + 172810 Acatgaaaaataa s panTro5.chr3 202001111 13 - 202621043 Acatgaaaaataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769150 13 - 205426864 Acatgaaaaataa i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588090 13 + 86207423 Acatgaaaaataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069055 13 + 204787373 Acatgaaaaatga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000907 13 - 192460366 Acatgaaaaatga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112871 13 - 17224310 Acatgaaaaatga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425052 13 - 41321030 Acatgaaaaatga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496528 13 - 101219884 Acatgaaaaatga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882495 13 - 924385 Acatgaaaaatga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723487 13 - 10587913 Acatgaaaaataa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058600 13 - 98464013 ATATgaaaaataa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730212 13 + 27742158 ATATgaaaaataa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267633 13 - 4835464 ATATgaaaaataa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726550 13 + 4093027 ATATgaaaaataa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069832 13 + 30473821 ATGTGGGAAATAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45777455 7 - 149736546 AGATGGA------ i mm10.chr6 C 0 C 0 e dasNov3.JH563077 1850583 0 - 2187301 C e canFam3.chr20 16604990 196 + 58134056 I a score=742930.000000 s hg38.chr14_KI270725v1_random 6601 106 + 172810 ctgtacagggtactaggcttaatactcagatagtgaaataatctgcacaacaaactcccatgacacaaatttacctctgcaacgaacctgcacatgcaccc-caaac s panTro5.chr3 202001124 106 - 202621043 ctgtacagggtactaggcttaatacccggatagtgaaataatctgtacaacaaacccccatgacacaagtttacctctgcaacgaacctgcacatgcaccc-caaac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769163 106 - 205426864 ctgtacagggtactaggcttaatacccggatagtgaaataatctgtacaacaaacccccatgacacaagtttacctctgcaacgaacctgcacatgcaccc-caaac i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588103 106 + 86207423 ctgtacaggctactaggcttaatacccggatagtgaaataatctgtacaacaaactcccacgacacaagtttacctctgcaacgaacctgcacatgcaccc-caaac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069068 106 + 204787373 ctatacaaggtagtaggcttaatacctgggtagtgccataatctgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61000920 106 - 192460366 ctatacaaggtagtaggcttaatacctgggtagtgccataatctgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112884 106 - 17224310 ctacacaaggtagtaggcttcatacctgggtagtgccataatctgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425065 106 - 41321030 ctatacaaggtagtaggcttaatacctgggtagtgccataatccgtacaacaaacgcccactacacaagcttacctctgcaatgaacctgcacatgcaccc-caaac i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496541 106 - 101219884 ctatacaaggtagtaggcttaatacctgggtagtgacataatctgtaaaacagatgcccactacacaagcttgcctctgcattgaacctgcacatgcaccc-caaac i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882508 106 - 924385 ctatacaaggtagtaggcttaatacctgggtagtgccataatctgtacagcaaacgcccactacagaagcttacctctgcaatgaacctgcacatgcaccc-caaac i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723500 106 - 10587913 ctatacaaggtagtaggcttaatacctgggtagtgacataatctgtacaacaaacacccactacgcaagcttacctctgcaatgaccctgcacatgcaccc-cagac i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058613 106 - 98464013 ttatacagagcactaggcttattacttgggta-tgtaataatctttacaacgaactcccaatacacaagttcacttctgcaacaaacctgcacaggtacccttaaac i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730225 107 + 27742158 ttatacagggcactaggcttattacctgggtagtgaaatcatctttaaaaccagttcccaagacacaagttcacttctgcaacaaacctgcagaggtgcccttaaac i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267646 107 - 4835464 ttatacagggcactaggcttattacctgggtagtgaaatcatctttaaaacaaactcccaagacacaagttcacttctgcaacaaacctgcacaggtgcccttaaac i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726563 107 + 4093027 ttatacagggcactaggcttattacctgggtagtgaaataatctttacaacaaactcccaagacacaagttcacttctgcaacaaacctgcacagttacccttaaac i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45777462 22 - 149736546 -----------------------ACTCAAATGGGGA------CTGT--------------------------------------------------------CAGAA i mm10.chr6 C 0 C 0 e dasNov3.JH563077 1850583 0 - 2187301 C e canFam3.chr20 16604990 196 + 58134056 I e otoGar3.GL873534 11069845 0 + 30473821 C a score=143189.000000 s hg38.chr14_KI270725v1_random 6707 31 + 172810 ttaaaataa--aaatt--aaaaaagaaaaAAATAG s panTro5.chr3 202001230 31 - 202621043 ctaaaataa--aaatt--aaaaaagaaaaAAATAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769269 30 - 205426864 ctaaaataa--aaatt--aaaaaag-aaaaAATAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588209 30 + 86207423 ttaaaataa--aaatt--aaaaaag-aaCAAATAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069174 31 + 204787373 ttaaaacaa--aagtt--aaaaaagaaaaAAATAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001026 26 - 192460366 tt-----aa--aagtt--aaaaaagaaaaAAATAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11112990 31 - 17224310 ttaaaacaa--aagtt--aaaaaagaaaaaaatag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425171 30 - 41321030 ttaaaacaa--aagtt--aaaaaag-aaaaAATAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496647 31 - 101219884 ttaaaacaa--aagtt--aaaaaagaaaaAAATAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882614 30 - 924385 ttaaaacaa--aagtt--aaaaaag-aaaaAATAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723606 31 - 10587913 ttaaaacaa--aggtt--aaaaaagaaaaAAATAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058719 26 - 98464013 ttaaaataattaagtt----a-----aaaaaaTAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730332 26 + 27742158 ttaaaataa--aagtt--aaa-----aaaaaaTAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267753 28 - 4835464 ttaaaataa--aagtttttaa-----aaaaaaTAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726670 27 + 4093027 ttaaaataattaagtt---aa-----aaaaaaTAG i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45777484 24 - 149736546 AGAAAAAAA--AAAAC--A-------TAGAAATAA i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1850583 10 - 2187301 TTAGAATTT--A----------------------- i dasNov3.JH563077 C 0 C 0 e canFam3.chr20 16604990 196 + 58134056 I e otoGar3.GL873534 11069845 0 + 30473821 C a score=835798.000000 s hg38.chr14_KI270725v1_random 6738 96 + 172810 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGCGGGAGACTTCA-AAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGGTGTCAGATCTAAAT---A s panTro5.chr3 202001261 96 - 202621043 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGTGGGAGACTTCA-AAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGGTGTCAGATCTAAAT---A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769299 96 - 205426864 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGTGGGAGACTTCA-AAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGGTGTCAGATCTAAAT---A i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588239 96 + 86207423 TTATACAGTAAAGAAA----AAGTAGTAAGTGTCAGTGGGAGACTTCA-AAA--TTATGAACAAAGTAAAAGAGGAACGAGGGTGGGATGTCAGATCTGaat---a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069205 95 + 204787373 TTATATAATAAAGAAA----AAGTAATAAGTGTCAGTGAGAGACTTCA-AAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001052 95 - 192460366 TTATATAATAAAGAAA----AAGTAATAAGTGTCAGTGAGAGACTTCA-AAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113021 95 - 17224310 ttatataataaggaaa----aagtaataagtGTCAGTGAGAGACTTCA-AAA--TTATTAACAAA-TAAAAGAGGGACAAAGATGGGATGTCAGATCCAAAT---A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425201 95 - 41321030 TTATATAATAAAGAAA----AAGTAATAAGTGTCAGTGAGAGACTTCA-AAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496678 93 - 101219884 TTATATAGTAAAGAAA----AAGTAGTAAGTGTCAGTGAGAGAC--CA-AAA--TTATTAACAAA-TAAAGGAGGAACAAAGATGGGATGTCAGATCCAAAT---A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882644 95 - 924385 TTATATAATAAAGAAA----AAGTAATAAGTTTCAGTGAGAGACTTCA-AAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCCAAAT---A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723637 93 - 10587913 TTATATAGTAAAGAAA----AAGCAATAAGTGTCAGTGAGAGACTTCA-AAA--TTATTAACAAA-TAAAAGAGGAACAAAGATGGGATGTCAGATCC--AT---A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058745 96 - 98464013 TCACATAGTAGAGAAA----AAATAATAAGTGTCAGTGAAAGATTTCA-AAA--ATATTAACAAAGTAAAAGAGAAACAAGGCTGGCATGTCAGATCCAAAT---A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730358 99 + 27742158 GTACACAGTAAAGAAA----AAATAGTAAGTATCAGGGAGAGATTTCA-AAA--ATATTAACAAAGTAAAAGAGAAACAAGGCTGCGATGTCAGATCCAAATAAGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267781 81 - 4835464 TTACATAGTAAAGAAA----AAATAA----TGTCAGTGAGGG--------------ATTAACAAAGTAAAAGAGAAACAAGCCTGGGATATCAGATTCAAAT---A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726697 100 + 4093027 TTACATAGTAAAGAAAAATTAAATAATAAGTGTCAGTGAGAGATTTCA-AAA--ATATTAACAAAGTAAGAGAGAAACAAGGCTGGGATGTCAGCTCCAAAT---A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069845 90 + 30473821 TTATATAGCGAAGAGA----AA-TAATGTGTGTCAATGAGAGATTTC--AAA--TTATTAGCAAAATAAAGGGGGG----GGGTGCAATGTTAGAGCCGTAT---A i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45777508 85 - 149736546 TTATATGTCTAAGA------AAGTAATGAATATCAGTGAGAG--TTCAGAAA--TTATTAATGACATAAAAATTGG--------GAGAGATCAGATCCAAAC---A i mm10.chr6 C 0 I 265 s dasNov3.JH563077 1850593 87 - 2187301 TTATACAGT---GAAA----AAATAATAAGCATCAGTGAGAAACTTCA-AAAACTTATTCACAAAATAAAAGGGGAAAAA--------TGTCAGATTCAAAT---A i dasNov3.JH563077 C 0 C 0 e canFam3.chr20 16604990 196 + 58134056 I a score=772846.000000 s hg38.chr14_KI270725v1_random 6834 100 + 172810 AAAGA--AATACAAAAAATAA---TAAAG-AAACAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGCATGATTata s panTro5.chr3 202001357 100 - 202621043 AAAGA--AATACAAAAAATAA---TAAAG-AAACAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTA-AATAATCATGAAAAAAGCATGATTata i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769395 100 - 205426864 AAAGA--AATACAAAAAATAA---TAAAG-AAACAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGCATGATTata i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588335 99 + 86207423 aaaga--aatacaaaaaataa---taaag-aaacaacaaaaTTTGCCAAAAA-------ATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGCATGATTATA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069300 99 + 204787373 AAACA--AACACAAAAAATAA---TCAAA-AATAAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGTA-GATTAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001147 99 - 192460366 AAACA--AACACAAAAAATAA---TCAAA-AATAAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGTA-GATTAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113116 99 - 17224310 AAACA--AACACAAAAAATAA---TCAAA-AATAAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AATAATCATGAAAAAAGTA-GATTAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425296 99 - 41321030 AAACA--AACCCAAAAAATAA---TCAAA-AATAAACAAAATTTGCCAAAAA------TATCCATACTAGAGAAACTACTTTTTT-AACAATCATGAAAAAAGCA-GATTAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496771 96 - 101219884 AAACA--AA-CACAAAAATAA---TCAAA-AATAAACAAAATTTGCCAAAAA------TATCCATACTAGAGAA---ACTTTTTT-AATAATCATGAAAAAAGCATGATTAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882739 99 - 924385 AAACA--AACCCCAAAAATAA---TCAAA-AATAAACAAAATTTGCCAAAAA------TATCCATATTAGAGAAACTACTTTTTA-AATAACCATGAAAAAAGCA-GATTAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723730 100 - 10587913 AAACA--AACACACAAAAAAA---TCAAA-AATAAACAAAACTTGCCAAAAA------TATCCATACTAGAGAAACCACTTTTTT-AACAATCATGAAAAAAGCATGATTAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058841 102 - 98464013 AAACA--AACACAAAAAATAA---TAAAGCAATCAACAAAATTTTTCTAAAA------TATTCACCCTAGACAAACTACTTTTTTGAATAACCACATAAAAAGCATGATTAAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730457 102 + 27742158 AGACA--AACACAAAAAATAA---TAAAGAAATCAACAAAATTTTCCAAAAA------TATTCATACTAGACAAACTACTTTTTTGAATAACCACATAAAAAGCATGATTAAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267862 97 - 4835464 AGACA--AACACAAAAAATAA---TAAAGAAATCAACAAAATTTTCCAAAAA------TATTCATACTAGACAAACTACTTTTTTGAATAACCACATAAAAAGCGTG-----A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726797 102 + 4093027 AGACA--AACACAAAAAATAA---TAAAGAAATCAACAAAATTTTCCAAAAA------TATTCATACTAGACAAACTACTTTTTTGAATAACTACATAAAAAGCATAATTAAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11069935 108 + 30473821 AAACA--AACACACAAAAAAAATTTAAAA-AAGCAACCAAGAATGCTAAAAATACACATATTTACATTGGAAGAATCGTTTCCAAAAATAACCAT--AAAAAACAGGACTCAA i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850680 101 - 2187301 AAACAATAACACAAAAAAGCA---TGAAGAAATTAGCAGGGCCTGGCAAAGA------TATTCACTCTGGAGGAACTATATTTTAAAAGAACCATGAAAA---CATGATTAAA i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45777593 265 - 149736546 I e canFam3.chr20 16604990 196 + 58134056 I a score=1345495.000000 s hg38.chr14_KI270725v1_random 6934 142 + 172810 taaataaaag---aaaaaagcaatgactactaaaa--tagaatataaaacaataaaGAAAACCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGTATTA-AAAAAGGGTT s panTro5.chr3 202001457 142 - 202621043 taaataaaag---aaaaaagcaatgactactaaaa--tagaatataaaacaataaaGAAAACCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGTATTA-AAAAAGGGTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769495 142 - 205426864 taaataaaag---aaaaaagcaatgactactaaaa--tagaatataaaacaataaaGAAAACCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGTATTA-AAAAAGGGTT i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588434 139 + 86207423 TAAATAAAAG--AAAAAAAGCAATGACTACTAAAA--TAGAATATAAAAC----AAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAAAAATATTACTGGTGTTTTTGAAAGGCAAAATTGAAGTGACAGTATTA-AAAAAGGGTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069399 138 + 204787373 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGATTA-AAAAAGGGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001246 138 - 192460366 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGATTA-AAAAAGGGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113215 138 - 17224310 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGATTA-AAAAAGGGTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425395 138 - 41321030 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGACAAAATTGAAGTGGCAGGATTA-AAAAAGGGTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64496867 138 - 101219884 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTAGTATTTTCAAAAGGTAAAATTGAAGTGGCAGGATTA-AAAAAGGGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882838 138 - 924385 TAAATAAAAG---AATA----AATGACTACTAAAA--TAGAATATAAAACAATAAAGAAAGCCTGTAGTAAACTAAGGAATTGTTGAGAAAAATATTATTGGTATTTTCAAAAGACAAAATCGAAGTGGCAGGATTA-AAAAAGGGTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723830 138 - 10587913 TAAATAAAAG---AATA----AATGACCACTAAAA--TAGAATATAAAACAGTAAAGAAAGCCTGTAGTAAACTAACGAATTGGTGAGAAAACTATTATCGGTATTTTCAAAAGGCAAAACTGACGTGGCAGGATTA-AAAAAGGCTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46058943 138 - 98464013 TAAATAAAAG--AAAAA----AATGACCACTAAAA--TAGAATATAAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAACGATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT--AAAAAGGGCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730559 138 + 27742158 TAAATAGAAG--AAAAA----AATGACCACTTAAA--TAGAATATGAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAACAATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT--AAAAAGTGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 267959 140 - 4835464 TAAATAGAAGAAAAAAA----AAAGACCACTAAAA--TAGAATATAAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAACGATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT--AAAAAGGGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3726899 139 + 4093027 TAAATCAAAG-AAAAAA----AATGACCACTAAAA--TAGAATATAAAATAATAAAGAAAGCCTGTAGTAAACTAAGAAATTGTTGAGAAAGATATTATTGGTATTTTCAAAAGGCAAAATTGAAGTGGCAGGAAT--AAAAAGGGTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070043 134 + 30473821 TATAGAAAAG---AAAA--ACAATAAACACTAAAA--TAGAACATGAAATAATAAAGTA----TGTAGTAAGCAAAGAAACTGCAGAGAAAAATATT---GGTGTTTGCAAAAGGCAAAATCAATGTGGTGGGGAAAGACACATATTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45777858 138 - 149736546 TAAGTAAAAG---GAAGAAATATTGACTCTGAAAACTCTGAATATGA----TCAAGTAAAACCTGTAATAAACTGAGAAGCTGCACTGAAAACTAACATCAGGATCCAC-ACAGACAGAGT-GATGTAGCTgggaat-gaaaaggctt i mm10.chr6 I 265 I 1060 s dasNov3.JH563077 1850781 139 - 2187301 TAAGCAAAAA---AAGA-AATAATGACCCCTAAAAA-TAGAACGTGAAATAATAAGTAAAGCCTATGGAGAACTAA-AAAGTACAGAGAAAAATATCCTTGGCATTTGCAAAAGGCAAAATTGATGTGACAGGGT---AAAAAAGACT i dasNov3.JH563077 C 0 C 0 e canFam3.chr20 16604990 196 + 58134056 I a score=95266.000000 s hg38.chr14_KI270725v1_random 7076 11 + 172810 GT----------TGCACACTG s panTro5.chr3 202001599 11 - 202621043 GT----------TGCACATTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769637 11 - 205426864 GT----------TGCACATTG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588573 11 + 86207423 GT----------TACACATTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069537 11 + 204787373 GT----------TACACATTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001384 11 - 192460366 GT----------TACACATTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113353 11 - 17224310 GT----------TACACATTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425533 11 - 41321030 GT----------TACACATTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497005 11 - 101219884 GT----------TACACATTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882976 11 - 924385 GT----------TACACATTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723968 11 - 10587913 GT----------TACACACTG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059081 11 - 98464013 GT----------TACCCATTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730697 11 + 27742158 GT----------TACACATTA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268099 11 - 4835464 GT----------TACACATTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727038 11 + 4093027 GT----------TACACATTA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070177 21 + 30473821 GTACATAAAATGTGCACAGTG i otoGar3.GL873534 C 0 C 0 s dasNov3.JH563077 1850920 11 - 2187301 GT----------CATACAAAA i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45777996 1060 - 149736546 I e canFam3.chr20 16604990 196 + 58134056 I a score=11849.000000 s hg38.chr14_KI270725v1_random 7087 1 + 172810 T s panTro5.chr3 202001610 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769648 1 - 205426864 T i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588584 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069548 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001395 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113364 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425544 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497016 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882987 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723979 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059092 1 - 98464013 C i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730708 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268110 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727049 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070198 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605186 1 + 58134056 T i canFam3.chr20 I 196 C 0 s dasNov3.JH563077 1850931 1 - 2187301 T i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45777996 1060 - 149736546 I a score=1228930.000000 s hg38.chr14_KI270725v1_random 7088 115 + 172810 GTATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGG------GTCAACTCATGGTTAATAAATACATCAG s panTro5.chr3 202001611 115 - 202621043 GTGTATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGA------GTCAACTCATGGCTAATAAATACATCAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769649 115 - 205426864 GTGTATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGA------GTCAACTCATGGCCAATAAATACATCAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588585 115 + 86207423 GTATATTTA-AAAGGCGAATTAG---AAAAATGGCTTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ACACCT------CAAAAATAGAATGA------GTCAATTCATGGTTAATAAATACATCAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069549 116 + 204787373 GTATATTTA-AAAGGCAAATTAG-AAAAAAATGGCCTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001396 116 - 192460366 GTATATTTA-AAAGGCAAATTAG-AAAAAAATGGCCTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113365 116 - 17224310 GTATATTTA-AAAGGCAAATTAG-AAAAATATGGCCTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425545 117 - 41321030 GTATATTTA-AAAGGCAAATTAGAAAAAAAATGGCCTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497017 116 - 101219884 GTATATTTA-AAAGGCAAATTAG--AAAAAATGGCTTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATGTATCAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 882988 117 - 924385 GTATATTTA-AAAGGCAAATTAGAAAAAAAATGGCCTAATTACCTATG----TAGCTTATTCCTGCAGAAGAAAC----ATACC-------CAAAAATAGAATTA------GTCAACTCCTGGTTAATAAATATATCAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6723980 116 - 10587913 GTATATTTA-AAAGGCAAATAAG--AAAAAATGGCTTAATTACCTACG----TAGCTGATTCCCGCAGAAGAAAC----ATACCT------CAAAAATAGAATTA------GTCAACTCCTCGTTAATAAATATATCAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059093 115 - 98464013 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCGATG----TAGCTTATTCCCGCAGAATAAAC----ATATCT------CAAAAATAGAATGA------GTCAACTCCTGGTTGATAAATACATCAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730709 115 + 27742158 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTACCTATG----TAGCTTATTCCTGCAGAAGACAT----ATACCT------CAAAAATAGAATGA------GTCAACTCCTGCTTGATAAATACATCAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268111 115 - 4835464 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTATGTATG----TAGCTTATTCCTGCAGAAGAAAC----GTACCT------CAAAAATAGAATGA------GTCAACTCCTGCTTGATAAATACATCAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727050 121 + 4093027 GCATATTTA-AAAGGCAAATTAG---AAAAATGGCTTAATTGCCTATG----TGGCTTATTCCTGCAGAAGAAAC----ATACCT------CAAAAATAGAATGAGTCAATGTCAATCCCTGGTTGATAAATACATCAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070199 119 + 30473821 GCATGGTTA-GAAGACTAATTTG---GAAACTGGCTTAATTATCTATG----TAGTTTATTCCCGCAAAACAAACCAATGGACCT------CAAAAATAAAACAG------CTCAACTCATGGTTAAAAAATGTATCAG i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779056 115 - 149736546 GCATATTTATGAAGCTAAATTTG---GAAACTGGCCTAA-TACCTTTATTTTTTTTTTATTTAAGTAGAAGAAAC----TC----------CAAAAATAGGCTGA------TTTAACTTGTGCTTAGCAAATATAACAG i mm10.chr6 I 1060 I 666 s canFam3.chr20 16605187 124 + 58134056 GTGTATTAG-GAGAGCAAATTGG----GAAATGGCTAAATTAACTATG----TATCTAATTCATGCAAAATAAACTGATAGACCTTAAAAAAAAAAAAAGAATGA------CTCAACTTGGGGTTAATGAAGGTATCAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1850932 118 - 2187301 GCATACCAG-GAGAGTAATTTGG----GAAATGATTAAATTAACTATA----CAGTTTATTCATACAAAAGAAACTGACAGATCT------CAAAAATAGAATGA------CTCACCTTATGATTAATAAATTTATTAT i dasNov3.JH563077 C 0 C 0 a score=11099.000000 s hg38.chr14_KI270725v1_random 7203 1 + 172810 G s panTro5.chr3 202001726 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769764 1 - 205426864 G i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588700 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069665 1 + 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001512 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113481 1 - 17224310 G i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425662 1 - 41321030 G i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497133 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883105 1 - 924385 G i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724096 1 - 10587913 G i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059208 1 - 98464013 G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730824 1 + 27742158 G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268226 1 - 4835464 G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727171 1 + 4093027 G i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070318 1 + 30473821 G i otoGar3.GL873534 C 0 I 261 s canFam3.chr20 16605311 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851050 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I a score=90954.000000 s hg38.chr14_KI270725v1_random 7204 8 + 172810 AGAAACAG s panTro5.chr3 202001727 8 - 202621043 AGAAACAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769765 8 - 205426864 AGAAACAG i panPan2.chr3 C 0 C 0 s nomLeu3.chr21 67588701 8 + 86207423 AGAAACAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069666 8 + 204787373 AGAAACAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001513 8 - 192460366 AGAAACAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113482 8 - 17224310 AGAAACAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425663 8 - 41321030 AGAAACAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497134 8 - 101219884 AGAAACAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883106 8 - 924385 AGAAACAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724097 8 - 10587913 AGAAACAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059209 8 - 98464013 AGAAACAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730825 8 + 27742158 AGAAACAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268227 8 - 4835464 AGAAACAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727172 8 + 4093027 AGAAACAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070580 8 + 30473821 AGAAACAG i otoGar3.GL873534 I 261 C 0 s canFam3.chr20 16605312 8 + 58134056 AGAAAAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851051 8 - 2187301 AGAAAGAA i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I a score=955293.000000 s hg38.chr14_KI270725v1_random 7212 88 + 172810 GACATTCCAGCAATGAAAGAA---ACATCATTAAGGAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATATCAC s panTro5.chr3 202001735 88 - 202621043 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATATCGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769773 88 - 205426864 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATATCGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 0 88 - 17846 GACATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATATCGC i gorGor5.CYUI01007532v1 N 0 C 0 s nomLeu3.chr21 67588709 88 + 86207423 GAAATTCCAGCAATGAAAGAA---CCATCATTAAGGAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATACCAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069674 88 + 204787373 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACACCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATTGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001521 88 - 192460366 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACACCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATTGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113490 88 - 17224310 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATTGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425671 88 - 41321030 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATTGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497142 88 - 101219884 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATCGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883114 88 - 924385 GGAATTCCAGCAATGCAAGAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATTGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724105 88 - 10587913 GGAATTCCAGCAATGCAATAA---ACATCATTAAGGAAACAATTATGAACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTGGATATCGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059217 87 - 98464013 AAAATTCCAGCAATGCAAGAA---CCATCATTAA-GAAACAATTGAGGACAAACATCCTGACTA-A-AGAAAAACCCAGCTGTTTGATACTGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730833 87 + 27742158 GAAATTCCAGCAATGCAAGAA---CCATCATTAA-GAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATACCGC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268235 90 - 4835464 GAAATTCCAGCAATGCAGAACCGTCCATCATTAA-GAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATACCGC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727180 87 + 4093027 AAAATTCCAGCAATGCAAGAA---CCATCATTAA-GAAACAATTGAGGACAAACATCCTGACTA-A-TGAAAAGCCCAATTCTTTGATACTGC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070588 89 + 30473821 GAGACTATAGCAATGCAGCAA---CCATAGTTAATAAAATAATTGAGAACAAAAATCCTGACTGTA-TAGAATGCCCAGTTCCTTGATCCTGC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605320 88 + 58134056 -AACTTCTCTCAATGTAGAAA---CTATAATTAAGGGAAAAAATGACAACAAATATGCTAAATG-AGTGGGAGGCTCAGCTGTTTGAAAATGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851059 86 - 2187301 GATATTCTAGCAaagtaggaa---ccataattaaagaagcaggaggggggcacccacct--ccc-a-tgagaggtcctaggtttggtttccat i dasNov3.JH563077 C 0 I 497 e mm10.chr6 45779171 666 - 149736546 I a score=698434.000000 s hg38.chr14_KI270725v1_random 7300 62 + 172810 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGAACTATT-ACC s panTro5.chr3 202001823 62 - 202621043 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGAACTATT-ACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769861 62 - 205426864 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGAACTATT-ACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 88 62 - 17846 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGAACTATT-ACC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67588797 62 + 86207423 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGAACTATT-ACG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069762 62 + 204787373 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001609 62 - 192460366 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113578 62 - 17224310 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425759 62 - 41321030 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497230 62 - 101219884 ACACAGCTCAATTCAGGAACGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883202 62 - 924385 ACACAGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724193 62 - 10587913 ACACTGCTCAATTCAGGAATGATATTCCAA---AAAATAATCA--AAGTGCCTTTAGACCTATT-GCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059304 63 - 98464013 ACACAGCTCAATTCAGGAATGATATTTCAA---AAAATAATTA--AACTGCCTTTAGACCTATTGGGC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730920 62 + 27742158 ACACAGCTCAATTCAGGAATCATATTCCAA---AAAATAATTA--AAGTGCCTTTAGACCTATT-GGC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268325 62 - 4835464 ACACAGCTCAATTCAGGAACGATATTCCAA---AAAATAATTA--AAGTGCCTTTAGACCTATT-GGC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727267 62 + 4093027 ACACAGCTCAATTCAGGAATGATATTCCAA---AAGATAATTA--AAGGGCCTTTAGACCTATT-GGC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070677 64 + 30473821 TCACAGCTTACTTTAAGAGTGATAGTCAGA-ATAAACTTTTTA--AAGTGCCTTTAGATTTCTG-GAA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605408 67 + 58134056 CCACAGCACCATTCACAAGTGGTATCAGAAAAAAAAAAAATCAACAAGTGCCTTTAGACCTTTT-CAC i canFam3.chr20 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I e dasNov3.JH563077 1851145 497 - 2187301 I a score=2655801.000000 s hg38.chr14_KI270725v1_random 7362 270 + 172810 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTATAAGGATGCAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTGTAAATATAT-GTAAACATACTTTAGACACATGCAAGTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC---------------AAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG s panTro5.chr3 202001885 272 - 202621043 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTATAAGGATGCAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTGTAAATATAT-GTAAACATACTTTAGACACACGCAAGTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC-------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204769923 269 - 205426864 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTATAAGGATGCAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTGTAAATATAC-GTAAACATATTTTAGACACACGCAAGTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC---------------AAAAAAAA-GGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 150 272 - 17846 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAATTGTATCTATAAGGATGTAAACTGCCCTCTGCCCTAAAATCTTTAATGACAGTACCACTGCTGTAAATATAT-GTAAACATACTTTAGACACATGCAAGTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATAAGC-------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACTATAGTTGACATGC-AAACTT-----AG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67588859 269 + 86207423 CATGCTTTTACTTTCAGAAGG--CATT-------TTGTA-GTT-------ACAAAAGAAAGAA-CAGAGATATT--TGTAACTGTACCTATAAAGATACAAACTGTCCTCTGCCCTAAAATCTTTAATGACAGCACTACTGCTGTAAATATAT-GTAAACATACTTTAGACACATGCAAGTTTTTTGAGGTTATATCAATAATATGTTT-CATATAACAAACTAAAAATAAGC---------------AAAAAAAATGGAAAAAGGGTATATA------ACATGCATTTACTATAGTTGACATG--AAACTT-----AG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66069824 256 + 204787373 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT-----------------TAAGGATACAAACTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTGTAAATATAT-GTAAGCATACTTTAGACACATGCAACTTTTTTGAGGTTATGTCAATAACAGGTTT-CATATAACAAACTAAAAATCAG--------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001671 257 - 192460366 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT-----------------TAAGGATACAAACTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTGTAAATATAT-GTAAGCATACTTTAGACACATGCAACTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAG-------------AAAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113640 256 - 17224310 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT-----------------TAAGGATACAAACTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTGTAAATATAT-GTAAGCATACTTTAGACACATGCAACTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAG--------------AAAAAAAAAATGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17425821 263 - 41321030 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CCGAGATAT-----------------TAAGGATACAAATTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTGTAAATATAT-GTAAGCATACTTTAGACACATGCAACTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAGCAA-------AAAAAAAAAAAAATTGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497292 270 - 101219884 CATATTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAAGGAAGAA-CGGAGATAT-----------------TAAGGATACAAACGGTCCGCTGCCCTAAAATCTTTAATGACAGTACCACTGCTGTAAATGTAT-GTAAGCATACTTTAGACACATGAAACTTTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAGCaaaaaaaataaaaagaaaaaaaaaggaaaaagGGTATGTA------ACATGCATTTACCATACTTGACATGC-AAACTT-----AG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883264 264 - 924385 CATGTTTTTACTTTCAGAAGG--CATT-------TTGTA-ATT-------ACAAAGGGAAGAA-CCGAGATAT-----------------TAAGGATACAAATTGTCCGCTGTCCTAAAATCTTCAATGACAGTACCACTGCTGTAAATATAT-GTAAGCATACTTTAGACACATGCAACTTTTTTGAGGTTATATCAATAACAGGTTT-CATATaacaaactaaaaatcagcaaa------aaaaaaaaaaaaaTTGGAAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724255 263 - 10587913 CATGTTTTTACTTTCAGAAGG--CATT-------TTGGA-ATT-------ACAAAAGGAAGAA-CCGAGATAT-----------------TAAGGATACAAACTGTCCGCTGCCCTAAAATCTTCAATGACAGTACCACTCCTGTAAATATAT-GTAAGCATACTTTAGACACATGCAACTCTTTTGAGGTTATATCAATAACAGGTTT-CATATAACAAACTAAAAATCAGCAA-------CAAAAAAAAAAAAATGGGAAAAGGGTATGTA------ACATGCATTTACCATAGTTGACATGC-AAACTT-----AG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059367 257 - 98464013 CATGTTTTTACTTTCTGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------TAAGGATACAAACTGTCCTTTGCCCTAAAATATTTAGTGACAATAACACGGCTGTAAATTTAT-ATAAACATACTTAAGACACATGCAAGTCTTTTGAGGTTATATCAATAAGGGTTTT-CATATAATGAACTAAAAATAAGC------------AAAAAAAGAAAAAGAAAAAGGGTATGTA------ACATACATTTACTATAGTTGAAATGC-AAACTT-----TG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27730982 252 + 27742158 CATGTTTTTACTTTCAGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------TAAGGATACAAACTGTCCCTTGCCCTAAAATATTTAATGACAATAACACTGCTGTAAATTTAT-ATAAACATATTTAAGACACATGCAAGTTTTTTGAAGTTATATCAATAACAGTTTT-CATATAATGAGCTAAAAATAAGC-----------------AAGAAAAGGAAAAAGGGTATGTA------ACATACTTTTACTATAGTTGAAATGC-AAACTT-----TG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268387 252 - 4835464 CATGTTTTTACTTTCAGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------TAAGGATACAAACTGTCCCTTGCCCTGAAATATTTAATGACAATAACCCTGCTGTAAATTTAT-ATAAACATACTTAAGACACATGCAAGTTTTTTGAAGTTATATCAATAACGGTTTT-CATATAACGAACTAAAAATAAGC-----------------AAAAAAAGGAAAAAGGGTATGTA------ACATACATTTACTATAGTTGAAATGC-AAACTT-----TG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727329 252 + 4093027 CATGTTTTTACTTTCAGAAGA--CATT-------TTGTA-ATT-------ACAAAAGAAAGAA-CAAAGATA------------------TAAGGATACAAACTGTCCTTTGCCCTAAAATATTTAATGACAATAACACTGCTGTAAATTTAT-ATCAACATACCTAAGACACATGCAAGTTTTTTGAGGTTATATCAATAACAGTTTT-CATATAAGGAACTAAAAATAAGC-----------------AAAAAAAGGAAAAAGGGTATGTA------ACCTACATTTACTGTAGTTGAAATCC-AAACTT-----TG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11070741 278 + 30473821 CATGTTCTTATTTTTTGGAGGATTATT-------TTTTAGACT-------GCAAAAGGAAAAAGCTGAGATGATAGAGGAAC--------TGAGGATACAAAACGTCTTCAGCCCTAATATCTAGAATGACAGTACCACTGCTGTAAATTTAT-ATGAATATCATTTAGTCACATACCAGT-TTTTGAGGTTAAGTAAGTAATAAATTTATATATAAAGAATAACAGATAAGC----------------AAACAAAGGTGTAAAGTGTGTTCATTAACTACATTCATTAACTACAATGGGAATGC-AAAACGTAGGAAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16605475 250 + 58134056 AAAGTTTCCAGTTTTTGAAAG--CATTTAAAAAATTACA-AGT-------ATAAGGGGGAGTG-GTAAGGTAT-----------------TAAGGATACAAACTATC--TTGTCCTAAAAGCTTGAATGAGAGTATCACTGTTGAAAATTTGTAAAAAACATACTTTAGTCACAGACAAGTTTGCT---GTTATATGAATAACAACTGTACACCTATGGAACTACAAGTATGT---------------------AAAGAGGAAAAGTTATGTA------TCACTCTTT----ATAATGGAAATGCAAAACTT-----AG i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1851642 246 - 2187301 CAAGTCTATACTTTCTCAAGG--CATT-------TTTTT-GTTTGTTTGAATAATAGAAAATA-AAAAAGTA------------------TTAAGACACAAACTGACCTTTACCCTAAAATCTTGAATGACAGTACCATTGCTATAAATTTAT-ATAACCATACTTTATAT--------GTTTTTGGAGATTATATGAAAAGCAAATT--CACATAAA----TTCAAATAAGC---------------AAACAAAAGGGAAAAC---TATACA------GCTCCTATTAACTACACTGCAAATTCAAAACTT-----AA i dasNov3.JH563077 I 497 I 3 e mm10.chr6 45779171 666 - 149736546 I a score=265847.000000 s hg38.chr14_KI270725v1_random 7632 22 + 172810 AGTCCCTGCTTTAA-AAAATCAA s panTro5.chr3 202002157 22 - 202621043 AGTCCCTGCTTTAA-AAAATCAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770192 22 - 205426864 AGTCCCTGCTTTAA-AAAATCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 422 22 - 17846 AGTCCCTGCTTTAA-AAAATCAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589128 22 + 86207423 AGTCCCTGCTTTAA-AAAATCAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070080 22 + 204787373 AGTCCCAGCTTTAA-AAAATCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001928 22 - 192460366 AGTCCCAGCTTTAA-AAAATCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113896 22 - 17224310 AGTCCCAGCTTTAA-AAAATCAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426084 22 - 41321030 AGTCCCAGGTTTAA-AAAATCAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497562 22 - 101219884 AGTCCCAGCTTTAA-AAAATCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883528 22 - 924385 AGTCCCAGCTTTAA-AAAATCAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724518 22 - 10587913 AGTGCCAGCTTTAA-AAAATCAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059624 22 - 98464013 AGTTCCTGCTTTAA-AAAATCAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731234 22 + 27742158 AGTCCCTGCTTTAA-AAAATCAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268639 22 - 4835464 AGTCCCTGCTTTAA-AAAATCAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727581 22 + 4093027 AGTCCCTGATTTAA-AAAATCAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071019 22 + 30473821 AGTCCCCACTTTAA-ACAATCAA i otoGar3.GL873534 C 0 I 167 s dasNov3.JH563077 1851891 23 - 2187301 AATCACAGCTTTAAGAAAATCAA i dasNov3.JH563077 I 3 C 0 e mm10.chr6 45779171 666 - 149736546 I e canFam3.chr20 16605725 3 + 58134056 I a score=121753.000000 s hg38.chr14_KI270725v1_random 7654 14 + 172810 CAATGAggctgggc s panTro5.chr3 202002179 14 - 202621043 CAATGAggctgggc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770214 14 - 205426864 CAACGAggctgggc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 444 14 - 17846 CAATGAggctgggc i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589150 14 + 86207423 CTATGAAgctgggt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070102 14 + 204787373 CTATGAggctgggc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001950 14 - 192460366 CTATGAggctgggc i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113918 14 - 17224310 CTATGAggctgggt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426106 14 - 41321030 CTATGAggttgggc i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497584 14 - 101219884 CTATGAggctgggc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883550 14 - 924385 CTATGAggctggga i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724540 14 - 10587913 CTATGAgactgggc i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059646 14 - 98464013 CTATGAggccaggt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731256 14 + 27742158 CTATGCggccaggt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268661 14 - 4835464 CTATGCggccatgt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727603 14 + 4093027 CTATGAggccaggt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071208 14 + 30473821 TTTTTAggctaggt i otoGar3.GL873534 I 167 C 0 s dasNov3.JH563077 1851914 14 - 2187301 CTCTAAAGTTCAAC i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I e canFam3.chr20 16605725 3 + 58134056 I a score=2228076.000000 s hg38.chr14_KI270725v1_random 7668 231 + 172810 acggtggctcactcctataatcccagcactttgggaggccaaggtaggcagatcacttgaggtcagcagttcgagaccagcct-gtccaatatgttgaaactgcatctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcagggccctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagat---cac s panTro5.chr3 202002193 231 - 202621043 gcggtggctcactcctataatcccagcactttgggaggccgaggcaggcagatcacttaaggtcagcagttcgagaccagcct-ggccaatatgttgaaaccacgtctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagat---cac i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770228 231 - 205426864 atggtggctcactcctataatcccagcactttgggaggctgaggcaggcagatcacttgaggtcagcagttcgagaccagcct-ggccaatatgttgaaaccacgtctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagctaggcgtggtggcaggggcctgtagtcccagctacttgggaggctgaggcagaagaatcgcttgaacccgggaggcagaggttgcagtgagccgagat---cac i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 458 231 - 17846 acggtggctcactcctataatcccagcactttgggaggccgaggtaggcagatcacttgaggtcagcagttcgagaacagcct-ggccaatatgttgaaactgcgtctccactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagat---cac i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589164 231 + 86207423 gcggtggctcactcctataatcccagcactttgggaggccgaggcaggcagatcacttgaggtcagcagttcgagaccagcct-ggccaatatgttgaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaacac-----aaaaattagctaggagtggtggcaggggcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagcggagat---cac i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070116 231 + 204787373 gtggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat---cat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61001964 231 - 192460366 gcggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat---cat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11113932 231 - 17224310 gcggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggccgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagat---cat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426120 231 - 41321030 gcggtggctcacacctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaaccgcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaagcggaggttgcagtgacccgagat---cat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497598 330 - 101219884 gcggtggctcacgcctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgttgaaaccgcatctctactaaaaatacaaacctgcacattatgcacatgtaccctagaactcaaagtataataataaaaaataaagaaaaaattaaaaaaaattaaaaaaaaataaaaataaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaagttgcagtgagccaagat---cgt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883564 231 - 924385 gcggtggctcacacctataatcccagcactttgggacgccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgtggaaacctcatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcgtggtggcaggggcctgtagtctcagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgacccgagat---tat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724554 231 - 10587913 gtggtggctcacgcctataatcccagcactttgggaggccgaggaaggcagatcacttgaggtcagcagtttgagaccagcct-ggccaatatgttgaaactacatctctactaa---------------------------------------------------------------------------------------------------aaatac-----aaaaattagccaggcatggtggcaggggcctgtagtctcagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagtcgagat---cat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059660 227 - 98464013 gcagtgacttacgcctgtaaccccagcactttgggaggccaaagcaggtagatcac--aaagtcaggagttggagaccagcct-ggccaatatggtgaaaccctatctttactaaa--------------------------------------------------------------------------------------------------aaatac-----aaaaattagctctgcatggttgtgggcaccagtagtcccaactactcagtaggctgaggcaggagaatctcttgaacccagagggcagaagttgcagtgagctgagat------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731270 226 + 27742158 gcggtgactcatgcctgtaaccccagcactttgggaga-caaggcgggtagatcac--aaagtcaggagttggagacaagcct-ggccaatatggtgaaaccccatctttactgaa--------------------------------------------------------------------------------------------------aaatac-----aaaaattagctgtgcatggttgtgggcgcctgtagtcccaactactcagtaggctgagtcaggagaatctcttgaacccaggaggcggaagttgcaatgagctgagat------ i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268675 226 - 4835464 gcggtgactcacgcttgtaacctcagcactttgggagg-caaggcgggcagatcac--aaagtcaggagttgtagaggagcct-caccaatatggtgaaaccccatctttactaaa--------------------------------------------------------------------------------------------------aaacac-----aaaaattagctgtgcatggttgtgggcgcctgtagtcacaactactcagtaggctgaggcaggagaatctcttgaacccaggaggcggaagttgcaatgagctcacat------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727617 230 + 4093027 gcagtgactcacgcctgtaaccccagcactttgggaagccaaggtgggtagatcac--aaagtcaagagttggagaacagcct-ggccaatatggtgaaaccccatctttactaaa--------------------------------------------------------------------------------------------------aaatac-----aaaaattagctgtgcatggttgtgggcgcctgtagtcccaactactcagtaggctgaggcaggagaatctcttgaacccaggaggcggtagttgcaatgagctgagattgt--- i aotNan1.NW_018502033v1 C 0 I 32 s otoGar3.GL873534 11071222 229 + 30473821 gcagtggctcacacctataatcttagcactttgggaggccaaggcaggaggactgcttgaggtcaggagtttgagaccagcctcagccaaaat---gaggccccatctctactaa---------------------------------------------------------------------------------------------------aaatatgtaaggaaaattagctcagcattgtggcaggtacctgtagtcccagctcctcaggacaccaaggcagaagaattgcttgaatccaaaagtgtgaagtctctgtaagcaagg-------- i otoGar3.GL873534 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I e dasNov3.JH563077 1851928 0 - 2187301 C e canFam3.chr20 16605725 3 + 58134056 I a score=290358.000000 s hg38.chr14_KI270725v1_random 7899 38 + 172810 accacacgccactacactccagcct-gggtgac--------agagcg s panTro5.chr3 202002424 38 - 202621043 actacacgccactacactccagcct-gggcgac--------agggcg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770459 38 - 205426864 actacacgccactacactccagcat-gggcgac--------agagcg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 689 38 - 17846 accacacgccactacactccagcct-gggtgac--------agagca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589395 38 + 86207423 accacaagccactacactccagcct-gggtgac--------agagcg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070347 38 + 204787373 gccacatgccactacactccagcct-gtgtgac--------agagta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002195 38 - 192460366 gccacatgccactacactccagcct-gtgtgac--------agagta i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114163 38 - 17224310 gccacatgccactacactccagcct-gtgtaac--------agagta i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426351 38 - 41321030 gccacatgccactacactccagcct-gtgtgac--------agaacg i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497928 46 - 101219884 gccacatgccacgacactccagcct-gtgcgacagagcgagaGAGCG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883795 38 - 924385 gccacatgccactacactccagcct-gtgcgac--------agagcg i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724785 38 - 10587913 gccacatgccactacactccagcct-gtgcgac--------agagca i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059887 34 - 98464013 ----catgccactgcactccagcct-cggagac--------acagca i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731496 34 + 27742158 ----catgccactgcactccagcct-gggagac--------agtgca i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268901 34 - 4835464 ----cgtgccactgcactccagcct-gggagac--------agcgca i cebCap1.NW_016107467v1 C 0 C 0 s otoGar3.GL873534 11071451 37 + 30473821 --ctgaggccatgacactctagcctggggcaat--------agaatg i otoGar3.GL873534 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I e dasNov3.JH563077 1851928 0 - 2187301 C e canFam3.chr20 16605725 3 + 58134056 I e aotNan1.NW_018502033v1 3727847 32 + 4093027 I a score=175054.000000 s hg38.chr14_KI270725v1_random 7937 28 + 172810 agactccatct----cc--------------------aaaaaaaaaa-aaaaa s panTro5.chr3 202002462 44 - 202621043 agactccatct----cc----aaaaaaaaaaaaaaaaaaaaaaaaaa-aaaaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770497 27 - 205426864 agactccatct----cc---------------------aaaaaaaaa-aaaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 727 29 - 17846 agactccatct----cc-------------------aaaaaaaaaaa-aaaaa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589433 28 + 86207423 agactccgtct----aa--------------------aaaaagaaaa-aaaaa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070385 48 + 204787373 agactccccct----ccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-aaaaa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002233 48 - 192460366 agactccacct----ccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-aaaaa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114201 25 - 17224310 agacttcacct----cc-----------------------aaaaaaa-aaaaa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426389 31 - 41321030 agactccacct----c-----------------aaaaaaaaaaaaaa-aaaaa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64497974 37 - 101219884 AGACTCCACCT----CC-----------aaaaaaaaaaaaaaaaaaa-aaaaa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883833 31 - 924385 agactccacct----c-----------------aaaagaaaaaaaaa-aaaaa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724823 28 - 10587913 agactccaccg----cc--------------------aaaaaaaaaa-aaaaa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059921 29 - 98464013 agactccatct----ca-------------------aaaaaaaaaaa-aaaaa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731530 30 + 27742158 agactccatct----ca-------------------aaaaaaaaaaacaacaa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268935 24 - 4835464 agacttcatct----ca-------------------aaaaaaaaaaa------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727879 33 + 4093027 agaatccatcttcaaca-------------------aaaaaaacaaa-agaaa i aotNan1.NW_018502033v1 I 32 C 0 s otoGar3.GL873534 11071488 27 + 30473821 aga-tctatct----ca--------------------aaaaaagaaa-aacaa i otoGar3.GL873534 C 0 C 0 e mm10.chr6 45779171 666 - 149736546 I e dasNov3.JH563077 1851928 0 - 2187301 C e canFam3.chr20 16605725 3 + 58134056 I a score=25789.000000 s hg38.chr14_KI270725v1_random 7965 2 + 172810 aa s panTro5.chr3 202002506 2 - 202621043 aa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770524 2 - 205426864 aa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 756 2 - 17846 aa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589461 2 + 86207423 aa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070433 2 + 204787373 aa i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002281 2 - 192460366 aa i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114226 2 - 17224310 aa i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426420 2 - 41321030 aa i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498011 2 - 101219884 aa i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883864 2 - 924385 aa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724851 2 - 10587913 aa i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059950 2 - 98464013 aa i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731560 2 + 27742158 aa i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268959 1 - 4835464 -a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727912 2 + 4093027 aa i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071515 2 + 30473821 aa i otoGar3.GL873534 C 0 T 483 s mm10.chr6 45779837 2 - 149736546 AA i mm10.chr6 I 666 C 0 e dasNov3.JH563077 1851928 0 - 2187301 C e canFam3.chr20 16605725 3 + 58134056 I a score=10438.000000 s hg38.chr14_KI270725v1_random 7967 1 + 172810 a s panTro5.chr3 202002508 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770526 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 758 1 - 17846 a i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589463 1 + 86207423 a i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070435 1 + 204787373 a i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002283 1 - 192460366 a i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114228 1 - 17224310 a i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426422 1 - 41321030 a i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498013 1 - 101219884 a i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883866 1 - 924385 a i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724853 1 - 10587913 a i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059952 1 - 98464013 a i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731562 1 + 27742158 a i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268960 1 - 4835464 a i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727914 1 + 4093027 a i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071034 1 + 30473821 C i otoGar3.GL873534 T 483 C 0 s mm10.chr6 45779839 1 - 149736546 A i mm10.chr6 C 0 C 0 e dasNov3.JH563077 1851928 0 - 2187301 C e canFam3.chr20 16605725 3 + 58134056 I a score=239303.000000 s hg38.chr14_KI270725v1_random 7968 20 + 172810 aaTCAACTATGAAGTTCAAC s panTro5.chr3 202002509 20 - 202621043 aaTCAACTATGAAGTTCGAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770527 20 - 205426864 aaTCAACTATGAAGTTCAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 759 20 - 17846 aaTCAACTATGAAGTTCAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589464 20 + 86207423 aaTCAGCTACGAAGTTCAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070436 20 + 204787373 aTTCAGCTATGAAGTTCAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002284 20 - 192460366 aTTCAGCTATGAAGTTCAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114229 20 - 17224310 aTTCAGCTATGAAGTTCAAC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426423 20 - 41321030 aaTCAACTATGAAGTTCAAC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498014 20 - 101219884 aaTCAACTATGAAGTTCAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883867 20 - 924385 TTTCAACTATGAAGTTCAAC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724854 20 - 10587913 aGTCAACTATGAAGTTCAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059953 20 - 98464013 aaTTAACTATGAAGTTCAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731563 20 + 27742158 aaaTAACTATGAAGTTCAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268961 20 - 4835464 aaTTAACTATGAAGTTCAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727915 19 + 4093027 aaTCTAATATG-AGTTCAAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071035 20 + 30473821 AATCAAGTAGGAAATTCAAC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779840 20 - 149736546 AACCAACAATAAAGTTCAGC i mm10.chr6 C 0 C 0 s canFam3.chr20 16605728 20 + 58134056 AATCAACTATGAATTTCAAC i canFam3.chr20 I 3 C 0 e dasNov3.JH563077 1851928 0 - 2187301 C a score=1351856.000000 s hg38.chr14_KI270725v1_random 7988 117 + 172810 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAAGCTATAAACTATATCAGTATAGAAAAAGATATATTGGAAGAAATAA s panTro5.chr3 202002529 117 - 202621043 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAAGCTATAAACTATATAGGTATAGAAAAAGATATATTGGAAGAAATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770547 117 - 205426864 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTGGCTATTAGAA-TTTATAAAGCTATAAACTATATAGGTATAGAAAAAGATATATTGGAAGAAATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 779 117 - 17846 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAAGCTATAAACTATATCAGTATAGAAAAAGATATATTGGAAGAAATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589484 117 + 86207423 AACTGCAAAATGTT----TAATCAA------AAG--AGTTTATCAAGAGAATGAAAAAGAATGTAGCTATTAGAA-TTTATAAGGCTATAAACTATATCAGTATATAAAAAGATATAAAGGAAGAAATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070456 117 + 204787373 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATGGAAAAAGATATATTGGAAGAAATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002304 117 - 192460366 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATGGAAAAAGATATATTGGAAGAAATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114249 117 - 17224310 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATGAGGCTATGAACTACATCAGTATGGAAAAAGATATATTGGAAGAAATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426443 117 - 41321030 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATAGAAAAAGATATATTGGAAGAAATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498034 117 - 101219884 AATTGCAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATGTAGCTATCAGAA-TTTATAAGGCTATGAGCTACATCAGTATAGAAAAAGATATATTGGAAGAAATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 883887 117 - 924385 AATTACAAACTGTT----TAATTAA------AAG--AGTTTATCAAGAGAATGAAATAGAATATAGCTATTAGAA-TTTATAAGGCTATGAACTACATCAGTATAGAAAAAGATATATTGGAAGAAATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724874 117 - 10587913 AATTGCAAGCTGTT----TAATT-A------AAG--AGTTTATCAAGAGAATGAAATAGAATGTAGCTATCAGAATTTTATAAGTCTATGAACTACATCAGTATAGAAAAAGATATATTAGAAGAAATAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46059973 114 - 98464013 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATTAAGAAAATG--AAAAAATGTAGCTATTAGAA-TAAATAAGGCTATGAACTATATCAGTATAGAAAAAGATATACTGGAAGAAA-AA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731583 117 + 27742158 AATTGCAAAATGTT----TAATCAA------AAG--AGTTTATTAAGAGAATGAAAAAAAATGTAGCTATTAGAA-TTTACAAGGCTATGAACTGTATCAGTATAGAAAAAGATAAACTGGAAGAAATAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 268981 116 - 4835464 AATTGCAAAATGTT----TAATCAA------AAG--GGTTTATTAAGAGAATG-AAAAAAATATAGCTAATAGAA-TTTATAAGGCTATGAACTATATCAGTATAGAAAAAGATATACTGGAAGAAATAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3727934 113 + 4093027 AATTGCAAAATG-T----TAATCAA------AAG--AGTTTATT-CGAGAATG--AAAAAATGTAGCTATTAGAA-TTTATAAAGCTATGAACTATATCAGTATAGAAAAAGATATACTGGAAGAAATAA i aotNan1.NW_018502033v1 C 0 I 7034 s otoGar3.GL873534 11071055 127 + 30473821 TATTGGAAATTGTTCCGATATTCAACTATTGGAA--ACGTTATCAAGAGAATACAAGTATGAGTAGCTTTTAGAA-TTTATAAGCCTATGGACTATTTTAGTATAGACAAAGATATATCAGAAGAAGTAT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45779860 104 - 149736546 AATGGTAAAATATG----TATTGAA------TG----------TAATGGAAGGAACAAATATGTGCCTATTGAAA-TGTCCTAGGATTCAGGCTGTATTGGC-CAGATAAAAATG----ACAAGAGATGA i mm10.chr6 C 0 C 0 s canFam3.chr20 16605748 119 + 58134056 AAGTGCAAAAGTTT----CAAGCAA------AAGATAGTTTCCCAGAGGAGTGTAAAAGTATGTCGCTATTAGAA-TTTATACGTATATGGTCTATATCAACATAGACAAAGATATATCAGAAGAAATAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1851928 116 - 2187301 AATAGCAAGATATT----TAACCAA------ATC--AGTTTATCAATAGAATGAAAATATATGTATTTATTAGCA-ATTATAAGCAAATGTACTGTATCAGTATAGAAAAAGATTTATCAGAAGAAAAA- i dasNov3.JH563077 C 0 C 0 a score=284449.000000 s hg38.chr14_KI270725v1_random 8105 23 + 172810 AACAGTCGGTACTTTTAATGTAT s panTro5.chr3 202002646 23 - 202621043 AACAGTCGGTACTTCTAATGTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770664 23 - 205426864 AACAGTCGGTACTTTTAATGTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 896 23 - 17846 AACAGTCGGTACTTTTAATGTAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589601 23 + 86207423 AACAGTTGGTACCTTTAATGTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070573 23 + 204787373 AACAGTTGGTACTTTTAATGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002421 23 - 192460366 AACAGTTGGTACTTTTAATGTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114366 23 - 17224310 AACAGTTGGTACTTTTAATGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426560 23 - 41321030 AACAGTTGGTACTTTTAATGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498151 23 - 101219884 AACAGTTGGTACTTTTAATGTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884004 23 - 924385 AACAGTTGGTACTTTTAATGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6724991 23 - 10587913 AACAGTTGGTACTTTTAATGTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060087 23 - 98464013 AACAGTTGGTATTTTAAATGTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731700 23 + 27742158 AACAGTTGGTATTTTTAATGTAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269097 23 - 4835464 AACAGTTGGTATTTTTAATGTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735081 23 + 4093027 AACAGTTGGTATTTTTAATGTAT i aotNan1.NW_018502033v1 I 7034 C 0 s otoGar3.GL873534 11071182 23 + 30473821 AATAGCTGATATTTTAATGATAG i otoGar3.GL873534 C 0 I 312 s mm10.chr6 45779964 17 - 149736546 ------CATTGTTTTAAGCATAT i mm10.chr6 C 0 C 0 s canFam3.chr20 16605867 22 + 58134056 AATGGTTGCTA-TTTAAGTATAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852044 23 - 2187301 AATGGTTGGTATTTTAGGTATAT i dasNov3.JH563077 C 0 C 0 a score=7352028.000000 s hg38.chr14_KI270725v1_random 8128 647 + 172810 TCATTTTTTTCTCCCAATGTATCAAATATTGAATAAAAACATATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--CAATATATGGCGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTGAAAG-AAGCCATCTTCATGGAAATACAGGATTATATTGG-------AAAAAAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTG----GACTCAATAAAATATATTTACTTCGTT----AAAAAAACACAAAC---CCATGCATACTAATAAGTAGAGAACCTCGGTTGCTGCTTCTGTTGATTACGGAGACTACTGGGATAAGGCAA-TCAAAACTAAGAAATAATTTGCCATTCTCTTGGAAGCCAGAGAAAAAG-AAAAACACCAgaaacctagccctgg-aatgtcattgaatagc----tgtaggatagtggcaaggatgtcag-catctgtaaca--ctcga-ttttctcttctgcaaaaatgaaactattagtattccaccatattgcaattaatatcacttgagctaa---tgtat s panTro5.chr3 202002669 653 - 202621043 TCATTTTTTTCTCCCAATGTATCAAATATTGAATAAAAACGTATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--CAATATATTGTGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAT--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTACAGACTATGTGCTTAACAAAATAAACACTGAAAG-AAGCCATCTTCATGGAAATACAGGATTATATTGG-AA----AAAAAAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATCACAAAGATT----------------------------TTGGAAAGACTCAATAAAATATATTTACTTTGTT----AAAAAAACACAAAC---CTATGCACACTAATAAGGAGAGAACCTCGGTTGCTGCTTCTGTTGATTACGGAGACTACTGGGAGAAGGCAA-TCAAAACTAAGAAGTAATTTGCCAGTCTCTCGGAAGCCAGAGGAAGAG-AAAACCACCAgaaacctagccctgg-aatgtcactgaatagc----tgtaggacagtggcaaggatgtcag-catctgtaaca--ctcga-ttttctcttctgcaaaaatgaaactattagtattccaccatattgcaattaatatcacttgagctaa---tgtat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204770687 651 - 205426864 TCATTTTTTTCTCCCAATGTATCAAATATTGAATAAAAACATATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--CAATATATTGTGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGGAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTGAAAG-AAGCCATCTTCATGGAAATACAGGATTATATTGG-------AAAAAAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTGGAAAGACTCAATAAAATATATTTACTTCGTT----AAAAAAACACAAAC---CTATGCATACTAATAAGGAGAGAACCTCGGTTGCTGCTTCTGTTGATTACGGAGACTACTGGGAGAAGGCAA-TCAAAACTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGAGAAAAAG-AAAACCACCAGAAACCTAGCCCTGG-AATGTCACTGAATAGC----TGTAGGATAGTGGCAAGGATGTCAG-CAACTGTAACA--CTCGA-TTTTCTCTTCTGCAAAAATGAAACTATTAGTATTCCACCATATTGCAATTAATATCACTTGAGCTAA---TGTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 919 651 - 17846 TCATTTTTTTCTCTCAATGTATCAAATATTGAATAAAAACATATATGC-------------------ACGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAATACTAT--ACATATATTGCGGCTTGAAGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------GTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTGAAAG-AAGCCATCTTCATGGAAATACAGGATTATATTGG--A----AAAAAAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGACT----------------------------TTGGAAAGACTCAATAAAATATATTTACTTCGTT-----AAAAAACACAAAC---CTGTGCATCCTAATAAGTAGAGAACCTCGGTTGCTGATTCTGTTGATTACGGAGACTACTGGGATAAGGTAA-TCAAAACTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGAGAAAAAG-AAAAACACCAgaaacctagccctgg-aatgtcattgaatagc----tgtaggatagtggcaaggatgtcag-catctgtaaca--ctcga-ttttctcttctgcaaaaatgaaactattagtattccaccatattgcaattaatatcacttgagctaa---tgtat i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67589624 655 + 86207423 TCATTTTTTTCTCCCAATGTATCAAATATTGAAAAAAAATATATATGC-------------------AGAAAATATGGTGCTATAATCAAATGGATACTCA-ATGAATACTAT--CAACATATTGGGGCTTGAGGTGAT-AA-------------------------AAATATACAGACAG--------------------------------------------TTCAGTTTGGAACCATGCAT-AAAATTATTTATGAAAAATAGAAGCTCCATATTCATTTATTTAACAAAGATGTATAGACTATGTGCTTAACAAAATAAACACTGAAAG-AAGCCATCTTCATGGAAATACAGGATTATATTGGAAA----AAAAAAAGTCACA-ATGCTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTGGAAAGACTCAGTAAAATATATTTATTTCGTT----AAAAAAATACAAAC---CTATGCGTACTAGTAAGTAGAGAACCTCGGTTGCTGCTTCTGTTGATTACGGAGACTATAGGGAAAAGGCAA-TCAAAACTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGAGAAAAAG-aaaaacaccagaaacctagccctggtaatatcattgaatagc----tgtaggatagtggcaaggatgtcag-tatctgtaaaa--ctcga-ttttctcttctccaaaagtgaaactattagtattccaccatattgcaattaatatcacttgagctaa---tgtat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66070596 659 + 204787373 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCTGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTGAGAG-AAGCCAACTTCATGGAAATACAGGATTATATTGG-GG----GAAAAAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTGGAAAGACTCAGTAAAATATATTTATTTTATT-A--AAAAAAATACAAAG---CTATGCATACTAACAAGTAGAGAACCTTGGTCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAG-AAAAACACCAGAAACCAAGCCCTGGTAATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAACA--TTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTATCACTTGAGCGAA---TGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61002444 659 - 192460366 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCTGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTGAGAG-AAGCCAACTTCATGGAAATACAGGATTATATTGG-GG----GAAAAAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTGGAAAGACTCAGTAAAATATATTTATTTTATT-A--AAAAAAATACAAAG---CTATGCATACTAACAAGTAGAGAACCTTGGTCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAG-AAAAACACCAGAAACCAAGCCCTGGTAATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAACA--TTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTATCACTTGAGCGAA---TGTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11114389 655 - 17224310 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCTGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTACAAAAGAGAGAAGCTCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTGAGAG-AAGCCAACTTCATGGAAATACAGGATTATATTGG-GG----GAAAAAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTG----GACTCAGTAAAATATATTTATTTTATT-T--AAAAAAATACAAAG---CTATGCATACTAACAAGTAGAGAACCTTGGTCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAG-AAAAACACCAGAAACCAAGCCCTGGTAATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAACA--TTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCTTATTGCAATTAGTATCACTTGAGCGAA---TGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17426583 661 - 41321030 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGATGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATGCAGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTGAGAG-AAGCCAACTTCATGGAAATACAGGATTATATTGG-GG----GAAAAAAGGCATA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTAGAAAGACTCAGTAAAATATATTTATTTTATTAA--AAAAAAATACAAAG---CTATACATACTAACAAGTAGAGAACCTTGGTCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAGAAAAAACACCAGAAACCAAGCCCTGGTAATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAATA--TTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTATCACTTGAGCGAA---TGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498174 659 - 101219884 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAGCACTAT--CAAAATATTGGGGCTCAAGGTGATAAA-------------------------AAATATACAGACAT--------------------------------------------GTCAGTTTGAGACCATGCAT-AAAATTATTCTTGAAAAATAGAAACCCTATATTCATTTATTTAAAAAAGATAAATAGACTATGTGCTTAACAAAATAAACACTGAAAG-AAGCCAACTTCATGGAAATACAGGATTATATTGG-GG----AAAAAAAGGCACG-ATATTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTGGAAAGACTCAGTAAAATATATTTATTTCGTT----AAAAAAATACAAAC---CTATGCATACTAACAAGTAGAGAACCTTAGTTGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAG-AAAAACACCAGAAACTTAGCCCTGGTAATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAACA--TTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTTGTATCACTTGAGCTAA---TGTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884027 658 - 924385 TCACTTTTTTCTCCCAATGTATCAAATATTGAATAAAAATATGTATGC-------------------AGGAAATATGGTGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTAGGGCTCGAGGTGAT-AA-------------------------AAATACGCAGACAG--------------------------------------------GTAAGTTTGGGACCATGCAT-AAAATTATTTATGAAAGAGAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTGCTTAACAAAATAAACACTGAGAG-AAGCCAACTTCATGGAAACACAGGATTATATTGG-GG----GAAAAAAGGCACA-ATGTTTTCTTTCCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTAGAAAGACTCAGTAAAATATATTTATTTTATT----TAAAAAATACAAAG---CTATGCATACTAACAAGTAGAGAACCTTGGTCGCTGCTTCTGTTGATTACGGAGACTCCTGGGATAAGGCAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAG-AAAAACACCAGAAACCAAGCCCTGGTAATATCATTGAATAGCTAGCTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAACA--TTCTA-TTTTCTCTTCTCCAAAAATGAAACGATTAGTATTTCACCATATTGCAATTAGTATCACTTGAACGAA---TGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725014 658 - 10587913 TCAC-TTTTTCTCCCAATGTATCAAATACTGAATAAAAATATGTATGC-------------------AGGAAATATAGTGCTATAATCAAATGGATACTCA-ATAAACACTAT--CAAAATATTGGGGCTCGAGGTGAT-AA-------------------------AAATATATAGACAG--------------------------------------------GTCAGTTTGGGACCATGCAT-AAAATTAATTATGAAAAATAGAAGCCCTATATTCATTTATTTAAAAAAGATGAATAGACTATGTACTTAACAAACTAAACACTGAAAG-AAGCCAACTTCATGGAAATACAGGA-CATATTGG-GG---AAAAAAAAGGCACA-ATGTTTTCTTTCCCGATTTATTAAGAAA-------------------------AATCACAAAGATT----------------------------TTGGAAAGACTCAGTAAAATATATTTATTTCGTT-A--AAAAAAATACAAAC---CTATGCATACTAATAAGTAGAGATCCTTGGTTACTGCTTCTGTTGATTACGGAGACCCCTGGGATAAGGTAA-TCATAATTAAGAAATAATTTGCCAGTCTCTTGGAAGCCAGGGAAAAAG-AAAAACACCAGAAACCTAGCCCTGGTAACATCATTGAATAGCTAGTTGTAGGATAGTGGCAAGGATGTCAG-CATCTGTAACG--TTCTA-TTTTCTCTTCTCCAAAAATGAAACCATTAGTATTTCACCATATTGCAATTAGTATCACTTGAGCTAA---TGTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060110 654 - 98464013 TTA--TTTTTCCCCCAATGTACAAAATACTGAATAAAAATATACATGC-------------------AGGAAATATGGTGCTACAATCAAATGGGTACTCA-GTAAATACTAT--CAGAATATTGGGGCTTGAGGTGGT--A-------------------------AAATATAGAGATAG--------------------------------------------TTCAGTTTGGGGCCATGCTT-TAAATTATTTATGAAAAATAGAAGCCTTATATTCATTTATTTAGCAAAGATATATAGACTGTGAGCTCAGCAAAATAAACACTGAAAG-AAGCCAACTTCATGGAAACACAGAATTATGTTGG-GC----AAAAAAAGTCACA-ATGCTTTTTTACCTGATTTACTAAGGAA-------------------------AATTACCAAGATT----------------------------TTAAAAAGTTTTAGCAAAATATATTTATTTTGTT-A-GAAAATAATGAAAAC---CTATGCATACTAATAATTAGAGAACTTCAGTTGCTGTTTCTGTTGATTATGAAGACTCCTGGGATAAAGAAA-TCAAAAACAAGAAGTGATTTGCCAGTCTCTTGGAAGCCCGAGAGAAAG-AAAAATACCAGAATCCTAGCCCTGGTAATATCATTGAATAGC----TGTAGGATAGTGGCAAGGATGTTAG-CATCTGTAACA--GTAAATTTTTCTCTTATCTAAAAGTGAAACTGTTAATATTCAACCATATTGCAATTAGTATCACTTGATCTAA---TGTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27731723 657 + 27742158 ATAT-TTTTTTCTCCCATGTACAAAATACTGAATAAAAATATACATGG-------------------AGGAAATATGGTGCTATAATCAAATGGGTACTCA-GTAAATACTAT--CAGAATATTGGGGCTTGAGGTTAT--A-------------------------AAATATACAGATAG--------------------------------------------GTCAGTTTGGGACCATGCTT-TAAATTATTTATGAAAAATAGAAGCCCTATATTCATTTACTTAACAAAGATATATAGACTATAAGCTCAGCAAAATAAACACTGAAAG-AAGCCAACTTCATGGAAATACAGAATTATGTTGG-GCAAAAAAAAAAAGGCACA-ACGCCTTTTTACCTGATTTACTAAGGAA-------------------------AATTACAAAGATT----------------------------TTAGAAAGTTTCAGCaaaatatatttattttgtt-a--aaaataatGAAAAC---CTGTGCATACTAATAAGTAGAGAACTTCATTTGCTGTTTCTGTTGATTATGGAGACTCCTAGGATAAGGAAA-TAAAAAATAAGAAGTGATTTGCCAGTGTCTTGGAAGCCCGAGAGAAAG-aaaaataccagaatcctagccctggtaatatcactgaatagc----tgtaggatagtggcaaggacattag-catctgtaaca--gtcaa-ttttctcttatctaaaactgaaactattaatattcaaccacattgcaattagtatcacttgatcaaa---tgtat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269120 651 - 4835464 TTA---TTTTCTCCCAATGTACAAAATACTGAATAAAAATATACATGT-------------------AGGAAATATGGTGCTATAATCAAATGGGTACTCA-GTAAATACTAT--CAGAATATTGGGGCTTAAGGTGAT--A-------------------------AAATATACAGATAG--------------------------------------------GTCAGTTTGGGACCATACTT-TAAATTATTTATGAAAAATAGAAGCCCTGTATTCATTTACTTAACAAAGATGTATAGACTATGAGCTCAGGAAAATAAACACTGAAAG-AAGCCAACTTCATGGCAATACAGAATTACCTTGG-GC----AAAAAAAGGCACA-ATGCTTTTTTACCTGATTTATTAAGGAA-------------------------AATTACAAAGATT----------------------------TTAGAAAGTTTCAGCAAAATATATTTATTTTGTT-A-AAAAATAATGAAAAC---TTATGCATACTAATAA-TAGAAAACTTCATTTGCTGTTTCTGTTGATTATGAAGACTCCTAGGATAAGGAAA-TCAAAAATAAGAAATGATTTGTCAGTCTCTTGGAAGACCAAGAGAAAG-aaaaataccagaatcctagccctggtaatatcattgaatagc----tgtaggagagtggcaaggatgttag-catctgtaaca--gtcaa-ttttctcttatctaaaaGTGAAACTATTAGTATTCAACCATATTGCAATTAGTATCACTTGATCTAA---AGTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735104 654 + 4093027 TTAT-TTTTTCCTACAATGTGCAAAATACTGAATAAAAATATACATGC-------------------AGGAAATATGGTGCTATAATCAAATGGGTACTTA-GTAAATACCAT--CAGAATATTGGGGCTTGAGGTGAT--A-------------------------AAATATACAGATAG--------------------------------------------GTCAGTTTGGGACCATGCTT-TAAATTATTTATGAAAAATAGAAGCTCTATATTCATTTATTTAACAAAGATGTATAGACTATGAGCTCAGCAAAATAAGCACTGAAAA-AAGCCAACTTCATGAAAATACAGAATTATCTTGG-GC----AAAAAAAGGCACA-ATGCTTTTTTACCTGATTTACTAAGGAA-------------------------AATTACAAAGATT----------------------------TTAGAAAGTTTCAGCAAAATATATTTATTTTGTT-AAAAAAATAATGAAAAC---CTATGCATACTAATAATTAGAGAACTTCAGTTGCTGTTTCTGTTGATTATGAAGACTCCTGGGATAAGGAAA-TCAAAAATAAGAAGTGATTTGCCAGCCTCTTGAAAGCCCGAGAGAAAG-AAAAATACCAGAATCCTAACCCTGGTAATATCATTGAATAGC----TGTAGGATAGTGGCAAGGATGTTAG-CATCTGTAACA--GTAAA-TTTTTTCTTATCTAAAAGTGAAACTATTAATATTCAACCATATTTC-ATTAGTATCATTTGATCTAA---TGTAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11071517 639 + 30473821 TCTTTCCTTTCTCCCAATATATAAAATCTTAAATAGAAACACACATGG-------------------AAGAAATATGTTTCTAAGATCAAATGACTATTCA-AAAAATGCTAT--CAAAATATTAGAACCTGAGGTGAT-AA-------------------------AAACATA--GGTGC--------------------------------------------ATCAATTTAAAACCATGAAT-AAAATTATTTGTGAAAACCCGAAGCTTTGT----GTTTATTTAACACAGATTTGTAGACAATGTGCTACATGAAACAAACCCTGAAAACAAGCCAGCTTCATGGAAAC-------TCTATTGG-------GCAAAAGGGCACACATGCATTCTTTCCTGATTTATTAAAGAA-------------------------AAGTGCAGTGATG----------------------------TTGGAAAAGCCCAGGAAAATATGCCCATTTAGAA-A--AAAATCAGACAAAC---GTATGCACACCAATAAATAGTGAA---GAGCGACTGCTTCGGTTGATTACTGACACCCCTGGGATAAGGCGA-TCAAAACTAAGAAATGATTTGTCAGTGTTTTGGAAGCCTGAGGTTAAA-GGAAACACCAGCCTCCTAGCCCTGGTATTATTGTTTAAGAGC----TGTTGGATAGTGACAAGGACATCGG-CATTTGTAACA--CACTA-TTTTCTCTT---TGAAAATGAAACTCTCCATCCCCCACCATACTGTGGTTAGTGGGACATGAGCTGATGCTGCAT i otoGar3.GL873534 I 312 C 0 s mm10.chr6 45779981 612 - 149736546 -----TTATTTCCTCTAAGTGTCAAA-GTTACATAAAAGAATTAATGC-------------------------------------ATCAAA----TACTTA-TTGAATACTGGTATAAAATATCAAAGCTTAAGGTGAT--A-------------------------AAATTTACAGGGAA--------------------------------------------GTCAGTTTACATATAGAAGT-TAAATTATTTTTGTATAA-AGAAGACCCACATTCAATTATTTAACAAATGTACATAGAAGGT-TACATAAACAAATGAGCATTGAAAATAAGTTAATTTAATGCAAA-ACAGGCTTACAATTG-TC----AGTAAACATTATC-CAGCTTTCTTG---GATTTGCTATAGAA-------------------------ACCCATACCTtttgttttttgtttgtttgtttgtttgtttgtttAACAAGCTCAGCAAAGAGCATTTATTTTGTT-A--CAAAAAACTTGGA---------------AACAAATAACGAGC---AGTTTCTGCTCTTGTTGATTCCTGAGACT--TGAGATATGACAA-TTAAGGCAAAGAATTCATCCATCAGTTTCTTGTAAAACATAGAGAAGG-GGAAACACCAGA------------GCACTACAGCTAAGAAGC----TGTTAGAGAGGGACAGAGGTAGCAGCCACACACCACA-----AA-TACTTTCCTCTTTAATGATAGAAGTATCCTTAGCACACTATATT--------CATCACTTGAATGAG---TACAT i mm10.chr6 C 0 I 103 s canFam3.chr20 16605889 677 + 58134056 ----TCATTTTTCCCAATGTACAAAGTTTTAAATCACAATATTTATTCAAAAAGTAAGTTGCAAAAAAAAAAGTAAGTTGCTACGGTGAAGTGAATATTTATGTAAGTGCTAT--CAAAATACTGGAGATAGAGATGCT-GC-------------------------AAATAGACACATAG--------------------------------------------GCCAATTAGGGACCATGTTC-ACAGTGACTTAAATACCACAGAGTTCCTATATTCATTCATTTAATAAAGACTTATAGAATGTATGGTAAACAAAGTAAACAGTGAAAATAAGCCGACTTCATGGAAATATAGGATTATGTTGA-GC-----AAAAATGGCATGCATGCCTTCTTTCCTCACTCACTGGAAAacacacacacacacatacacacacacaaacacaAAACAG----------------------------TTGGAAA-CCTGAGtaaaatatattcattt---t-a--aaaataatatGAACCTACTATGCAGACCAATAACTAAGAAA---GAATTGCTGCCTGTTTTGATTATGGAGACTCCTGGAGTAAGGCAA-TTAAAACTAAGAAATAATTTGGCACCCTGTTGGAAGCCAGAGAGAAAG-AAAAACACTACAGACCTAGCCAAGGTAAC-----------------TGTGGAATAGTGGTAAGAACATCAG-CATTTGTAACAAACTCAA-TTTTCTCTTCTTTAAAAATGAAACTATTA-TATTCCACCATATTG----TGGTATCACTTGAGCTAA---TATAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852067 696 - 2187301 TCAT-TTTTTCTCCCAATATACAAAGTG--AAATAAAAATGTTTATTC-------------------AGGAAATACATTGCTATAATCAAAT------TCA-ACAAATGCCAG--GAAAATATTGTAACTCG-GGTgat-aaatagatgattgaaagatagattgatagatagacagatagatCGAGGCATGATAGAGTGATGATGATGCTCGATAAGACATAAAATCAGTTAGGAACCATGTATAAAAATCACTTAAATATAATAGAAGTTAAATAGTCACTCCTTTAACAAAACTTCATAGAATATGTGGTAAACAAAATAAACACTGAAAGGAAGACAAGCTCATGGAAATATAGGATTACCCTGA-CC-------AAAAGTCATATGTGCTTACTTTCCTGATTTACTTAAGAA-------------------------AACTACAAAGAAG----------------------------TTGGAAAAGCTTTGTAAAGCATATTCATTTTGTTGA--AAAATAATGGGAAC---CTATGCACACCAATAAG-AGTGAA---TAGTTGCTGCTTCCACTGATTACTGAGACACCTGGGATAAGGCAATTCAAAAAAAAGAAATAATTTGTCAG-CTCTTGGAAGCCAGAGGGAAAG-GAAaagaccagaatcctagttctggcaatgtggtttaatagc----tgtgagataatggtaagtatgacag-gatttgttacacactcaa-ttttctctccttaaaaaaaaatac-----------------attgtggtcagtatcacttaagctaa---tacac i dasNov3.JH563077 C 0 C 0 a score=498284.000000 s hg38.chr14_KI270725v1_random 8775 47 + 172810 acaaGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- s panTro5.chr3 202003322 47 - 202621043 acaaGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771338 47 - 205426864 ACAAGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1570 47 - 17846 acaaGCAGTATGAAATCCCACAGGATT---CACATGTAAAATATTGGA-TT---- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590279 47 + 86207423 acaagcagtttgaaaTCCCAAAAGATT---CACATGCAAAATATTGGA-TT---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071255 47 + 204787373 ATAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003103 47 - 192460366 ATAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115044 47 - 17224310 ACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427244 47 - 41321030 ACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498833 48 - 101219884 ACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATACTGGATTT---- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884685 46 - 924385 AC-AGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGA-TT---- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725672 48 - 10587913 ACAAGCAGTTTGAAATCCCAAAGGATT---CACATGTAAAATATTGGATTT---- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060764 47 - 98464013 ACAAGCAGCTTGAAATCCAAAAGCATT---TACATGtaaaatattagt-at---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732380 47 + 27742158 acaagcagtttgaaatccaaaagcatc---cacatgtaaaatattagc-at---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269771 47 - 4835464 ACGAGCAGTTTGAAATCCAAAAGCATT---GACATGCAAAATATTAGC-AT---- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735758 47 + 4093027 ACAAGCAGTTTGAAATCCAAAAGCATT---CACATGTAAAATATTAGT-AT---- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072156 50 + 30473821 ATAAGCAGTTTTAAATTGGAAAACATTGCGGACATGCAAAACCCTGGA-GT---- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606566 47 + 58134056 CTCAGTGGTTTGAAATTGGAAAACACG---CACACATAAAATACTGGT-AT---- i canFam3.chr20 C 0 I 4 s dasNov3.JH563077 1852763 54 - 2187301 acaagtggtttgaaattggaaaacatcatgcacatgtaaaatattggt-attact i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45780593 103 - 149736546 I a score=2250429.000000 s hg38.chr14_KI270725v1_random 8822 187 + 172810 TTTTATAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAACAAT--ACAGCGTGAGCGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTTAGTAAAATGTCTGTGGAACCTAAAT---- s panTro5.chr3 202003369 187 - 202621043 TTTTATAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAACAGT--ACAGTGTGAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTTAGTAAAATGTCTGTGGAACCTAAAT---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771385 187 - 205426864 TTTTATAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAACAGT--ACAGTGTGAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTTAGTAAAATGTCTGTGGAACCTAAAT---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1617 187 - 17846 TTTTATAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACGAAATGCAGTTTTCATTCCACAGTTTCACTCTCATACACTTAATAACTTTTGTTAACGTAATAAT--ACAGTGTCAGAGTTCCTGGGGCTATGCCTGACCCAAAGCAGACACTTAGTAAAATGTCTGTGGAACCTAAAT---- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590326 183 + 86207423 TTTTATAT--TTTAATATGTAAAATGTAAGTTGTTTCTTT----TCTGATACAAAATGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAACTTTTGTTAACATAACAAT--ACAGTGTGAGTGTTCCTGGTGCTATGCCTGACCCAAAGCAGACACTTAGTAAAATGTCTGTCGAACCTAAAT---- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071302 187 + 204787373 TTTTGTAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTAGGTACTTAATAAGTTTTGTTAACATTACAAT--ACAGTGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTCACTAAAATGTCTGTCGAACCTAAAT---- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003150 187 - 192460366 TTTTGTAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTAGGTACTTAATAAGTTTTGTTAACATAACAAT--ACAGTGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTCACTAAAATGTCTGTCGAACCTAAAT---- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115091 187 - 17224310 TTTTGTAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTAGGTACTTAATAAGTTTTGTTAACATAACAAT--ACAGTGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTCACTAAAATGTCTGTCGAACCTAAAT---- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427291 187 - 41321030 TTTTGTAT--TTTAATATGTAAAACGTAAGTTGTTTCTTTTCTCTCTGATACAAAATCCAGTTTTCATTCCACAATTTCACTCTTATGTACTTAATAAGTTTTGTTAACATAACAAT--ACAGTGCGAGAGTTTCTGGTGCTATGCCTGACCCAAAGCACACACTCACTAAAATGTCTGTCGAACCTAAAT---- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64498881 187 - 101219884 TTTTGTAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCAATCCACAATTTCACTCTTATGTACTTAATAAGTTTTGTTAACATAACAAT--ACAGTGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTCACTAAAATGTCTGTCGAACCTAAAT---- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884731 187 - 924385 TTTTGTAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATACAGTTTTCATTCCACAATTTCATTCTTATGTACTTAATAAGTTTTGTTAACATAACAAT--ACAGTGCGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACATACTCACTAAAATGTCTGTCGAACCTAAAT---- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6725720 187 - 10587913 TTTTGTAT--TTTAATATGTAAAATGTAAGTTGTTTCTTTTCTCTCTGATACAAAATGCAGTTTTCATTCCACAATTTCACTCTTATATACTTAATAAGTTTTGTTAACATAACAAT--ACAGTGTGAGAGTTCCTGGTGCTATGCCTGACCCAAAGCACACACTCACTAAAATGTCTGTCGAACCTAAAT---- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060811 182 - 98464013 ttttatat--tttaatttgtaaaatataaGTTGTTTCTTTTCTCTCTGATACAAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACAAAACAAT--GCAGTGTGAGAGTTCCTGGCACTATGCCTGACCCAAAGCAGACACTTACTAAAATGTC-----AAGCTAAAT---- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732427 184 + 27742158 ttttATAT--TTTAATTTGTAAAACATAAGTTGTTTCTTTTCTCTCTGATGCAAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACATAACAAT--GCAGTGTGAGAGTTCCTGGCGCTATGCCTGACCCAAAGCAGACACT---TAAAATGTCTGTCGAACCTAAAG---- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 269818 187 - 4835464 TTTTATAT--TTTAATTTGTAAAATATAAGTTGTTTCTTTTCTCTCTGATACAAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACATAACAAT--GCAGTGTGAGAGCTCCTGGCACTATGCCTGACCCAAAGCAGACACTTACTAAAATGTCTGTCAAACCTTAAT---- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735805 187 + 4093027 TTATGTAT--TTTAATTTGTAAAGTATAAGTCGTTTCTTTTCTCTCTGATATGAAGTGCAGTTTTCATTCCACAGTTTCACTCTCATATACTTAATAAGTTTTGTTAACATAGCAAT--GCAGTGTGAGAGTTCCTGGCATTATGCCTGACCCAAAGCAGACACTTACTAAAATGTCTGTCGAACCTAAAT---- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072206 187 + 30473821 TTTTGTATAGTTTAAGATTTAGAATACAAATTGCTAATT----CTCCGATAGAAAGTGTGGCTTTCATTTTACTGTCTCACTCTCATCTACTTGATGAGTTTTATTAACATAACAACAGACGTTGGGACAGTTCCTGGCACTGGGCCTAACCCCAAACAGACAATCACTAAAATGCCCATTGAATCTCAAT---- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45780696 183 - 149736546 TTTCACAG--TTTAACATTTCAAACACAAGGTGTTTGGTCTCCCCATAATAGTGAGT--AGTGTGGCTGCTTGAGTTGCTCTCTCAAAAGCATCCTGATTTT--CCAGCCTGACAAT--GCATTGTAAAAGTTATGGGCATCGTGCTTTATCCAGAAAAGTGTCTCCCTAAAGTGAGTACAGAAGCTGagt---- i mm10.chr6 I 103 I 404 s canFam3.chr20 16606617 186 + 58134056 TTTTATAG--ATTTAGACCTAAAATAGGAGTTGTTTCTTCTTCCTCTGATATAAAAAGTGGCTCACATTTCAAAGTTTCACTTCCATGTACTTAATAAGTTTTGCTAACAAAACAAT---CATAGTAAAGGTTCCTAGTAGTATGTCTGACTCAAAACAGATGCTCCTTAAAATGTCTGTTGAGCCTAAAT---- i canFam3.chr20 I 4 C 0 s dasNov3.JH563077 1852817 154 - 2187301 CTCTATAG--TTTAAAACCTAAAATGTGAGTTGTTTGTTCTCC--------------------------------TCTCATTCTCACTCACATAATAATTTTTATTTACAAAAAaat--gca-tgtgaaagctcttggtaccaagcctgaaccaaagtaggcatgcattaaaACGCT----GAACCTAAAAGCAC i dasNov3.JH563077 C 0 C 0 a score=2795079.000000 s hg38.chr14_KI270725v1_random 9009 235 + 172810 TTATTTTAAGATACAATTGGAATCT---AAACTAAACGAGTTTTCAAATTCAGAATCAGGCATATTTGCTGCAAAGCATTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-GTGAAC s panTro5.chr3 202003556 235 - 202621043 TTATTTTAGGATACAATTGGAATCT---AAACTAAAAGAGTTTTCAAATTCAGAATCAGGCATATTTGCTGCAAAGCATTATGGGTCTCATTTCCATTTCCAAATCGGCCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-GTGAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771572 235 - 205426864 TTATTTTGGGATACAATTGGAATCT---AAACTAAAAGAGTTTTCAAATTCAGAATCAGGCATATTTGCTGCAAAGCATTATGGGTCTCATTTCCATTTCCAAATCGGCCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-GTGAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 1804 235 - 17846 TTATTTTAGGATACAATTGGAATCT---AAACTAAAAGAGTTTTCAAATTCAGAATCAGGCATATTTGCTGCAAAGCTTTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCCATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTG--CTCTTTCATAACCCAGAGACATT-AATTACAATGTAATAGCATGATAAACACC-GTGAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590509 237 + 86207423 TTATTTTAGGATATAACTGGAATCT---AAACTAAAAGAGCTTTCAAATTTAGAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCCTTTCACGCATCATGTTACTCAGGGATAAA-GCACATCTAAGTGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAATGGAATAGCATGATAAACACC-ATGAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071489 236 + 204787373 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCGTATTTGCTGCAAAGAATTATGAGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAGCGGAATAGCATGGTAAACACC-ATAAAC i rheMac8.chr2 C 0 I 23 s macFas5.chr2 61003337 236 - 192460366 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCGTATTTGCTGCAAAGAATTATGAGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAGCGGAATAGCATGGTAAACACC-ATAAAC i macFas5.chr2 C 0 I 6 s macNem1.NW_012018021v1 11115278 236 - 17224310 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCGTATTTGCTGCAAAGAATTATGAGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAGCGGAATAGCATGGTAAACACC-ATAAAC i macNem1.NW_012018021v1 C 0 I 23 s cerAty1.NW_012009469v1 17427478 236 - 41321030 TTATTTAAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAACGGAATAGCATGGTAAACACC-ATAAAC i cerAty1.NW_012009469v1 C 0 I 23 s chlSab2.chr22 64499068 236 - 101219884 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTGAAATT-ATAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-CATTACAATGGAATAGCATGGTAAACACC-ATGAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 884918 236 - 924385 TTATTTTAGGATACAATTGGAAACT---ACAGTAAAAGAGTTTTAAAATT-ATAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATCTAAGAGAAACAGAAGTTAAATCTGCTCTCTTTCATAACCCAGAGACATT-AATTACAACGGAATAGCATGGTAAACACC-ATAAAC i manLeu1.NW_012098965v1 C 0 I 23 s colAng1.NW_012114711v1 6725907 237 - 10587913 TTATTTTAAGATACAATTGGAAACT---ACAGTAAAATAGTTTTTAAATT-ATAATCAGCCAAATTTGCTACAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCATCAA-GTCGATCTTTTCATGCATCATGTTACTCAGGGATAAA-GCACATGTAAGAGAAACAGAAGTTAAATCTGCTGTCTTTCATAACCCAGAGACATTAAATTACAATGGAATAGCATGGTAAACACC-ATGAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46060993 237 - 98464013 TTATTTTAGGATACAACTGGAATCT---AAAATAGAAGAGTTTTGAAATTTAAAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCACCAA-GTCAATCTCTTCACATGTCATGGTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATCTGCTTTCTTTCATAACTCAGAGACATT-AATTACAATGGAATAGCATGATAAACACCCATGAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732611 237 + 27742158 TTATTTTAGAATACAATTGAAACCT---AAATTAAAAGAGTTGTTAAATTTAGAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCGCCAA-GTCAATCTCTTCACGTGTCATGCTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATCTGCTCTCTTTCATAACTCAGAGACGTT-AATTACAATGGAATAGCATGATAAACACCCATGAAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270005 237 - 4835464 TTATTTTAGGATACAATTGGAATCT---AAAATAAAAGAGTTTTTAAATTTAGAATCAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCGCCAA-GTCAATCTCTTCACATGTCATGCTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATCTGCTCTCTTTCGTAACTCAGAGACATT-AATTACAATGGAATAGCATGATAAACACCCATGAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3735992 237 + 4093027 TTATTTTAGGATACAATTGGAATCT---AAAATAAAAGAGTTTTTAAATTTAGAATGAGGCATATTTGCTGCAAAGAATTATGGGTCTCATTTCCATTTCCAAATCCACCAT-GTCAATCTTTTCACATGTCATGCTACTCAGGGATAAA-GCACATTTAAGTGAAACAG-AGATAAATATGCTCTCTTTCATAACTCAGAGATGTT-AATTACAATGGAATAGCATGCTAAACACCTATGAAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072393 233 + 30473821 CTATTTTAGGATACAATTGAAATCTTCCAAAGTGAAAGAGTTTTTAAATTTAGAATCAGGCATATTGGCGGCAAAGAATTAT-----TTATTTCCCAGTC--AATCAACCAACATCTATCTTTTCAAGTGTCGTGGTGTGCAGGAAGAAAGGCACATCTAAATAAAACAGAAAATAAATCTGCGGTCTTACAGGATCCAGTAA-ATT-GATTATAAAAGAATAGTAAGATAAATACC-ATGAA- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16606803 235 + 58134056 TTGTTTTAAAATATAATTGGAATCTTCTGAAATAAGAGCGTTTTAAAAATTAGAATCAGGCATATTTGCTGCAAAGAGTTATGAATATCATTTTCAAAT--AAATCAGCCAA--TATATCTTTTCAAAGGTTGTGTTACTCAGGGACAAA-GCACACCTAAATGAAACA--AGATAAATATGCTCTCTTTTAGAACCCAGAGAAATT-AATTATAGTGGATTGTCATGATAAAGACC-ATGAAG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1852971 237 - 2187301 CTATTTTAGGACATAACTGGAATCTTCTTAAATAAAAGAGTATTTAATATTAGAATTAGTCATATTTGCTACAAAGAATTATGGTTCTCATTTCCAAAT--AAATTGACCAA-ATCTATCTTTTCAAAGATGATGTTATACAGGGATAAA-GCATACCTAAATGACATAGAAGATAAATGTGCTCTCTTT-AGACCCCAGAGAAATT-AATTACAATGGAATAGTGTAATAAAGACG-ATGAGC i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45780879 404 - 149736546 I a score=12121.000000 s hg38.chr14_KI270725v1_random 9244 6 + 172810 GATAT-G s panTro5.chr3 202003791 6 - 202621043 GATAT-G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771807 6 - 205426864 GATAC-G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2039 6 - 17846 GATAT-G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590746 6 + 86207423 GATAC-A i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 61003579 6 - 192460366 AGCATG- i macFas5.chr2 I 6 I 11 s chlSab2.chr22 64499304 5 - 101219884 AAAAT-- i chlSab2.chr22 C 0 C 0 s colAng1.NW_012114711v1 6726144 5 - 10587913 AATAT-- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061230 6 - 98464013 AATAT-G i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732848 6 + 27742158 AATAT-G i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270242 6 - 4835464 AATAT-G i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736229 6 + 4093027 AGTAT-G i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072626 6 + 30473821 AATAT-G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607038 6 + 58134056 AGTAC-G i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853208 6 - 2187301 AATAT-G i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45780879 404 - 149736546 I e manLeu1.NW_012098965v1 885154 23 - 924385 I e cerAty1.NW_012009469v1 17427714 23 - 41321030 I e macNem1.NW_012018021v1 11115514 23 - 17224310 I e rheMac8.chr2 66071725 23 + 204787373 I a score=1402676.000000 s hg38.chr14_KI270725v1_random 9250 119 + 172810 GAGATTAATAG-----AAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATATGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTAAAATAAAAC s panTro5.chr3 202003797 118 - 202621043 GAGATTAATAG------AAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATGAAAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771813 118 - 205426864 GAGATTAATAG------AAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATGAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2045 119 - 17846 GAGATTAATAG-----AAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTAAAATAAAAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590752 119 + 86207423 GAGATTAATAG----AAAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGG-TGGGTGGAAATAAGGGAGGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071748 120 + 204787373 GAGATTAATAG----AAAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i rheMac8.chr2 I 23 C 0 s macFas5.chr2 61003596 120 - 192460366 GAGATTAATAG----AAAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i macFas5.chr2 I 11 C 0 s macNem1.NW_012018021v1 11115537 120 - 17224310 GAGATTAATAG----AAAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i macNem1.NW_012018021v1 I 23 C 0 s cerAty1.NW_012009469v1 17427737 120 - 41321030 GAGATTAATAG----AAAAAAATAAGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i cerAty1.NW_012009469v1 I 23 C 0 s chlSab2.chr22 64499309 120 - 101219884 GAGATTAATAG----AAAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAACCAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACCGAAATAAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885177 120 - 924385 GAGATTAATAG----AAAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAGCAAGGGAAGTTG-GCCTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i manLeu1.NW_012098965v1 I 23 C 0 s colAng1.NW_012114711v1 6726149 119 - 10587913 GACATTAATAG-----AAAAAATATGAA----AAGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTGGAAACAAGGGAAGTTG-GCTTCCAAAGGGCAAGTAAAGTAGAACTGAAATAAAAC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061236 116 - 98464013 GAGATTAATGG-----GAAAAATATGGG----AGGAAAA----AGCAGCTTAGGAAGAAAC-CAAAAGGATGGGTTGAAATAAGGGAAGTTA-GCCTTCAATGAGCAAGTAAAGTAGAACTGAAATAAAAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732854 119 + 27742158 GAGATTAATGG-----GAAAAATGTGGG----AGGAAAATGACAGCAGC-CAGGAAGAAAC-AAAAAGGATGGGTTGAAATAAGGGAAGTTG-GCCTCCAAAGAGCAAGTGAAGTAGAACTGAAATAAAAT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270248 119 - 4835464 GAGATTAATGG-----GAAAAATACGGG----AGGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTTGAAATAAGGGAAGTTG-GCCTCCAAAGAGCAAGTAAAGTAGAACTGAAATAAAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736235 119 + 4093027 GAGATTAATGG-----AAAAAATATGGG----AGGAAAATGACAGCAGC-TAGGAAGAAAC-AAAAAGGATGGGTTGAAATAAGGGAAGTTG-GCCTCCAAAGAGCAAGTGGAGTAGAACTGAAATAAAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072632 123 + 30473821 GCGATTAATAG----AAAATAATATGGGCTCTAGGGGAGTTGAAGCAGC-TACAAATAAGT--AAGAGAATGGCTGGAAACAAGGGAAGTTG-TACCCCAAATGTCAAGTAAATTACAACTGCAATAAAAG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607044 120 + 58134056 GAGCTTAATAG---AAAAAAAAAATGAG----AATGAAATAGCAGAAGC-CTGGAAGAAGCCAAAAAGGACGGATAGGAAGAAAGAAAGT---ATCTGCAAAGGTCAAGTAAAGTAGAATTGGAATAAAAC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853214 123 - 2187301 GAGataaatttttttaaaaatatttGGG----AGAAAACTGACAGTAGC-TAGGAAGAAGC-CAAAGGGAT-GCCAGGAACAAGGAAAACTGTAACTCAAAAGGTCAAGTAAAATAGAACTGAAAAAAAT- i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45780879 404 - 149736546 I a score=2713424.000000 s hg38.chr14_KI270725v1_random 9369 250 + 172810 CTGGT--GATTTTGATCTGCATGTGTAATTAATAT-------AGTTTCTGGTGGGGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGAAGG--CAAC----ACGAATACACAGATCACATCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAAATCTCTTTGACACAAGTAACC------AT--------AG------AAGACACAGGTAACATATGGGTTGCTCTTTA--TGTAGGGCT s panTro5.chr3 202003915 250 - 202621043 CTGGT--GATTTTGATCTGCGTGTGTAATTAATAT-------AGTTTCTGGTCGGGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGAAGG--CAAC----ACGAATACACAGATCACGTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAACTCTCTTTGACACGAGTAACC------AT--------AG------AAGACACAGGTAACACATGGGTTGCTCTTTA--TGTAGGGCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204771931 250 - 205426864 CTGGT--GATTTTGATCTGCGTGTGTAATTAATAT-------AGTTTCTGGTCGGGGGTGATGGGAGTAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGATGG--CAAC----ACGAATACACAGATCACGTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAAATCTCTTTGACACGAGTAACC------AT--------AG------AAGACACAGGTAACACATGGGTTGCTCTTTA--TGTAGGGCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2164 250 - 17846 CTGGT--GATTTTGATCTGCATGTGTAATTAATAT-------AGTTTCTGGTGGGGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTGTGAAGG--CAAC----ACGAATACACAGATTAGGTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCACCATATTATTGAAATCTCTTTGACACGAGTAACC------AT--------AG------AAGACACAGGTAACATATGGGTTGCTCTTTA--TGTAGGGCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67590871 248 + 86207423 CTGGT--GATTTTGATCTGTGTGTGTAATTAATAT-------AGTTTCTGATGGAGGGTGATGGGAGAAATGGGGATAAAGAAAAGCCCT--------GAGTAGCAACCTTCTTG-CT-GAATTGTGAAGG--CAAC----ATGAATACATAGATCG-GTCTTGGG--AAAAATAAATGTGACCC-CTTAAAATTTGCGCCATATTATTGAAATCTCTTTGATGTGAGTAACC------AT--------AA------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66071868 250 + 204787373 CTGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGGAACCTTCTTGCCT-GAATTATGAAGG--CAAC----ACGAATACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTGGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61003716 250 - 192460366 CTGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAAC----ACGAATACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTGGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11115657 250 - 17224310 CTGGT--GATTTTAATATATGTGTGTAACTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAAC----ACGAATACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGGTGACATCCGGGTTGCTCTTTA--TGTAGGGCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17427857 250 - 41321030 CTGGT--AATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAGC----ACGAATACAAAGATCAGGTATTGGG--AAAAATAAACGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--CGTAGGGCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499429 250 - 101219884 CCGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAGAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAAC----ACGAATACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACATGAGTAACC------AC--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885297 250 - 924385 CTGGT--GATTTTAATGTATGTGTGTAATTAATGT-------AGTTTCTGGTGGGGGGTGATGGAAAAAATGGGGATGAAGAAAAGCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAAC----ACGAATACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGGTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726268 250 - 10587913 CTGGT--GATTTTAATATATGTGTGTAATTAATGT-------AGTTTCTGGTGGAGGGTGATGGAAGAAACGGGGATGAAGAAAATCCCT--------GAGTAGCAACCTTCTTGCCT-GAATTATGAAGG--CAAC----ACGAATACATAGATCAGGTATTGGG--AAAAATAAATGCAACCC-CTTAAAATTTGCACCATATTATTCAAATCTCTTTGACGTGAGTAACC------AT--------AG------AAGACACAGCTAACATCCGGGTTGCTCTTTA--TGTAGGGCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061352 249 - 98464013 CTGGC--AGTTTTAATCTGTGGGCGTAATTAATAC-------AGTTTCTGGTGAGGGGTGATGGGAGAAATGGTGATAAAGAACATCACT--------GAGTAGCAACCTTCTTGCCT-AAAGTGTAAAGG--CAAC----ACAAATACATGGATCAGATCTTGAG--AAAAAGAGATGCAATCC-CTTAAAATTTGCACCATATTATTCAGATCTCTTTGAGGTGGGTAAGC------AT--------AG------AAGATACAGGTAACATC-GGATGGCTCTTAA--TGTAGGGCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27732973 250 + 27742158 CTGGC--AGTTTTAATCTGTGTGTGTAATTAATAT-------AGTTTCTGGTGAGGGGTGATGGCAGAAATGGGGATAAAGAACAGCCTT--------GAATAGCAACCTTCTTGCCT-AAATGGTAAAGG--CAAC----ACAAATACATGCATCAGGTCTTGAG--AAAAAGAGATGCAATCC-TTTAAAATTTGTACCATATTATTCAGATCTCTTTGAGGTGGGTAAGC------AT--------AG------AAGACACAGGTAACATCTGGATGGCTCTTAA--AGTAGGGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270367 250 - 4835464 CTGGC--AGTTTTAATCTGTGTGCGTAATTAATAT-------AGTTTCTGGCGAGGGGTGATGGGAGAAATGGGGATAAAGAACAGCCTA--------GAGTAGCAACTTTCTTGCCT-AAATTGTAAAGG--CAAC----ACAAATACATGGATCAGATCTTGAG--AAAAAGAGATGCAATCC-CTTAAAATTTGCACCATATTATTGAGATCTCTTTGAGGTGGGTAAGC------AT--------AG------AAGACAAAGGTAACATCCAGATGGCTCTTAA--TATAGGGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736354 250 + 4093027 CTGGC--AGTTTTAATCTATGTGCATAATTAATAT-------AGTTTCTGGTGAGGGGTGATGGGAGAAATGGGGATAAAGAACAGCCCT--------GAGTAGCAACCTTCTTACCT-AAATTGTAAAGG--CAAC----ACACATACATGGATCAGGTCTTGAG--AAAAAGAGATGCAATCC-CTTAAAATTTGCATCATATTATTCAGATCTCTTTGAGGTGGGTAAGC------AC--------AG------AAGACACAGATAACATCCTGATGGCTCTTAA--TATAGGGCC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11072755 231 + 30473821 CTGGT--GATTTTAGTTGATGTGAGTCACGAATATA---GTGAGTCTCCGGC-AAGAATGATGG------TCGAGGTGAAACACAGCACC--------GTGTAGCAACCCCCTGGGCT-GAACTGTTAGGG--TAAC----ATCA--------GTCAGTTCTTGGG--AAAAAGAGATGTGACGT-GCTAATATTTGTTCCATATTACTCAAATTTCTTTGAGGTGAGTAATCACAAAAAT--------AG------AAGACACAAGGAATATTTA---TTCTCTT------------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781283 230 - 149736546 CTGGT--AGTTT--------GTATACAATTAAAATATTCATGAATTTCTGTCAAGATGTGATGACAGA---GGAGATGACGTAAAAC----------------ACAACCT-------T-GAATTGTAAATA--CAGCAATTATAAATACATACATGGGCGTTTAGG--AAAGAGATGT----TCT-TTTAAAAATTGTTCTGAGTTATTCTAG-CTTTTGGAGGCAGATAAGC------AG--------AG--CAATAAAAGGCAGATAATATAAG----ATATTTTT--TGGAAGGAT i mm10.chr6 I 404 C 0 s canFam3.chr20 16607164 257 + 58134056 TTGGT--GATCTTAATCAACATGTATAACTAATAG---AGCAAGTTTCCAGGGGGATATATTGGAGGA---GTAGATAGAGCATAGCCC------------TATCAATCTTCTTGCCC-AAATTGTACAAG--GAACATGCATGAATATATAGATCAGTTCTCAAGAAAAAAAGAAATGCGACTC-CATAAAATTTGTTCCATATTATTCAAATTCCTTTTA--TGAGTAAGT------AT--------AAGGCTATAAAACACAGGTAATATCAAAGCTGTTCTTCA--TGTAGGACT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1853337 269 - 2187301 CTAGTGAGATTTTAACCAATGTGTATAACTAATAT---AGCTAGTTTCAGGTGGGGGG----------AAGAGCAATATAGCACAGCCCTTTTGCCCGGAGAAGAAAACTTTTGGTCTAAAAGTATAAGTGGTGAGC----ATGAATTTATGGATCAATTCTTAGGCAAAAAAGAGATGCTACCCTTTTAAAATTTGTTCCATATTATTCAAATTTCTTTTCAGTGAGAAAGA------ATAAAAGAAGAG------AAGACACTGA-AATATCATTGTTACTCTTTAGGTGTAAAGCT i dasNov3.JH563077 C 0 I 640 a score=366477.000000 s hg38.chr14_KI270725v1_random 9619 40 + 172810 ---TTAGC-----AGTCTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- s panTro5.chr3 202004165 40 - 202621043 ---TTAGC-----AGTCTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772181 40 - 205426864 ---TTAGC-----AGTCTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2414 40 - 17846 ---TTAGC-----AGTCTATTCA-----------GTCTTTTAC---------CATGTAACTA--CTTTGT------------------- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591119 40 + 86207423 ---TTAGC-----AATCTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTGT------------------- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072118 45 + 204787373 ---TTAGCAATCTAATCTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i rheMac8.chr2 C 0 I 166 s macFas5.chr2 61003966 45 - 192460366 ---TTAGCAATCTAATCTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i macFas5.chr2 C 0 I 166 s macNem1.NW_012018021v1 11115907 45 - 17224310 ---TTAGCAATCTAATCTACTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428107 45 - 41321030 ---TTAGCAATCTAATCTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i cerAty1.NW_012009469v1 C 0 I 166 s chlSab2.chr22 64499679 45 - 101219884 ---TTAGCAATCTAATCTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i chlSab2.chr22 C 0 I 166 s manLeu1.NW_012098965v1 885547 45 - 924385 ---TTAGCAATCTAATCTATTCA-----------GTCTTTTAC---------CATGTGACTA--CTTTAT------------------- i manLeu1.NW_012098965v1 C 0 I 165 s colAng1.NW_012114711v1 6726518 45 - 10587913 ---TTAGCAATCTAATCTATTCA-----------GTCTTTTAC---------CATGTAACTA--CTTTAT------------------- i colAng1.NW_012114711v1 C 0 I 166 s calJac3.chr15 46061601 43 - 98464013 AAAGTAGT-----ATTCTATTCA-----------GTCTCTTAC---------CATATGACTA--CTTTAT------------------- i calJac3.chr15 C 0 I 156 s saiBol1.JH378125 27733223 40 + 27742158 ---TTAGC-----AATTGAGTCA-----------GTCTCTTAC---------CATATGACTA--CTTTAT------------------- i saiBol1.JH378125 C 0 I 159 s cebCap1.NW_016107467v1 270617 40 - 4835464 ---TTAGC-----AATCTATTCA-----------GTCTCTTAA---------CATATGACTA--CTTTAT------------------- i cebCap1.NW_016107467v1 C 0 I 159 s aotNan1.NW_018502033v1 3736604 40 + 4093027 ---TTAGC-----AATCTATTCA-----------GTCTCTTAC---------CATATGACTA--CTTTAT------------------- i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45781513 60 - 149736546 ---TCAGC-----AAACTGtttatatatatattttttttttaCTTGACCACATATGTGACTG--TGATGT------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16607421 59 + 58134056 ---CT-GT-----AAACTACTT------------GTTTTTTCC---------CATGTGACTAGTCTTTGTTTCTGAATATTATTTTCGT i canFam3.chr20 C 0 C 0 e dasNov3.JH563077 1853606 640 - 2187301 I e otoGar3.GL873534 11072986 0 + 30473821 C a score=28944.000000 s hg38.chr14_KI270725v1_random 9659 2 + 172810 AT s panTro5.chr3 202004205 2 - 202621043 AT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772221 2 - 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2454 2 - 17846 AT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591159 2 + 86207423 AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072329 2 + 204787373 at i rheMac8.chr2 I 166 C 0 s macFas5.chr2 61004177 2 - 192460366 at i macFas5.chr2 I 166 C 0 s macNem1.NW_012018021v1 11115952 2 - 17224310 AT i macNem1.NW_012018021v1 C 0 I 471 s cerAty1.NW_012009469v1 17428318 2 - 41321030 at i cerAty1.NW_012009469v1 I 166 C 0 s chlSab2.chr22 64499890 2 - 101219884 at i chlSab2.chr22 I 166 C 0 s manLeu1.NW_012098965v1 885757 2 - 924385 at i manLeu1.NW_012098965v1 I 165 C 0 s colAng1.NW_012114711v1 6726729 2 - 10587913 at i colAng1.NW_012114711v1 I 166 C 0 s calJac3.chr15 46061800 2 - 98464013 at i calJac3.chr15 I 156 C 0 s saiBol1.JH378125 27733422 2 + 27742158 at i saiBol1.JH378125 I 159 C 0 s cebCap1.NW_016107467v1 270816 2 - 4835464 at i cebCap1.NW_016107467v1 I 159 C 0 s aotNan1.NW_018502033v1 3736644 2 + 4093027 AT i aotNan1.NW_018502033v1 C 0 I 202 s mm10.chr6 45781573 1 - 149736546 -T i mm10.chr6 C 0 I 8 s canFam3.chr20 16607480 2 + 58134056 AT i canFam3.chr20 C 0 I 31 s dasNov3.JH563077 1854246 2 - 2187301 at i dasNov3.JH563077 I 640 C 0 e otoGar3.GL873534 11072986 0 + 30473821 C a score=230426.000000 s hg38.chr14_KI270725v1_random 9661 36 + 172810 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT s panTro5.chr3 202004207 36 - 202621043 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772223 36 - 205426864 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2456 36 - 17846 GTGgaaaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa-----------------gatagaagcatt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591161 36 + 86207423 GTGGAAAAAT-----------------------------------------------------------------------------------------------------------TGTTACATAAACAA-----------------AATAGAAGCATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072331 36 + 204787373 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004179 36 - 192460366 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116425 36 - 17224310 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i macNem1.NW_012018021v1 I 471 C 0 s cerAty1.NW_012009469v1 17428320 36 - 41321030 gtagaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499892 36 - 101219884 gtggaaacat-----------------------------------------------------------------------------------------------------------cgttacgtaaacaa-----------------aatagaagcttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885759 36 - 924385 gtggaaacat-----------------------------------------------------------------------------------------------------------tgttacgtaaacaa-----------------aatagaagcttt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726731 36 - 10587913 gtggaaaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa-----------------aatagactcttt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061802 35 - 98464013 gtggagaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa------------------atagaagtgtt i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733424 35 + 27742158 gcggagaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa------------------atagaagcgtt i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270818 35 - 4835464 gtggagaaat-----------------------------------------------------------------------------------------------------------tgttacataaacaa------------------atagaagaatt i cebCap1.NW_016107467v1 C 0 C 0 s otoGar3.GL873534 11072986 8 + 30473821 --------------------------------------------------------------------------------------------------------------------------------------------------------GAAATTTT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45781582 53 - 149736546 TTACTAAAAC-----------------------------------------------------------------------------------------------------------AAACAAATAAATAACAGGAAGAAGGCGAGTAGAGAGAGGCATT i mm10.chr6 I 8 I 59 s canFam3.chr20 16607513 143 + 58134056 gtgaaatgatcaaaaacgaatctaattagaaatgatttaaggaactaggtacagacacttagttgacagaagacaacatttcagagagacatcatggttgtctctaagatgtgaatatgttactataatag-----------------atcagaaacatt i canFam3.chr20 I 31 C 0 s dasNov3.JH563077 1854248 36 - 2187301 gtggataggt-----------------------------------------------------------------------------------------------------------tgtggcataaacaa-----------------agcataaacatt i dasNov3.JH563077 C 0 C 0 e aotNan1.NW_018502033v1 3736646 202 + 4093027 I a score=84504.000000 s hg38.chr14_KI270725v1_random 9697 12 + 172810 ttctctttgata- s panTro5.chr3 202004243 12 - 202621043 ttctctttgata- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772259 12 - 205426864 ttttctttgata- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2492 10 - 17846 ttctcttt--ta- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591197 12 + 86207423 ttctctttgata- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072367 12 + 204787373 ttctctttgatt- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004215 12 - 192460366 ttctctttgatt- i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116461 12 - 17224310 ttctctttgatt- i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428356 12 - 41321030 ttctctttgatt- i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499928 12 - 101219884 ttctctttgatt- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885795 12 - 924385 ttctctttgatt- i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726767 12 - 10587913 ttctctttgatt- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061837 12 - 98464013 ttctcattgagt- i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27733459 12 + 27742158 ttctcattgatt- i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 270853 12 - 4835464 ttctcattgatt- i cebCap1.NW_016107467v1 C 0 I 1 s otoGar3.GL873534 11072994 1 + 30473821 T------------ i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607656 12 + 58134056 ttctctgtgatt- i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1854284 11 - 2187301 --ttctttgagtc i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45781635 59 - 149736546 I e aotNan1.NW_018502033v1 3736646 202 + 4093027 I a score=310921.000000 s hg38.chr14_KI270725v1_random 9709 25 + 172810 ccaagagtagagctaagaccaataa s panTro5.chr3 202004255 25 - 202621043 ccaagagtagagttaagaccaataa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772271 25 - 205426864 ccaagagtacagctaagaccaataa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2502 25 - 17846 ccaagagtagagctaagaccaataa i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591209 25 + 86207423 ccaagagtagagctaagaccaatag i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072379 25 + 204787373 ccaagagtagagctaagaccaatag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004227 25 - 192460366 ccaagagtagagctaagaccaatag i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116473 25 - 17224310 ccaagagtagagctaagaccaatag i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428368 25 - 41321030 ccaagagtagagctaagaccaatag i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499940 25 - 101219884 ccaagagtagagctaagaccaatag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885807 25 - 924385 ccaagagtagagctaagaccaatag i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726779 25 - 10587913 ccaagagtagagctaagatcaacag i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061850 25 - 98464013 ccaagaatagagctaagatcagtag i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27733472 25 + 27742158 ccaagagtagagctaagatcagtag i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 270866 25 - 4835464 ccgagagtagagctaagatcagtag i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3736848 25 + 4093027 ccaagagtagagctaagatcagtag i aotNan1.NW_018502033v1 I 202 C 0 s otoGar3.GL873534 11072995 22 + 30473821 ---Ggagtagagctaataccaatgg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16607669 25 + 58134056 ctaacagtagaaccaggatggacgg i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1854295 25 - 2187301 acaagagtagaactagtggcaatgg i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45781635 59 - 149736546 I a score=5556093.000000 s hg38.chr14_KI270725v1_random 9734 496 + 172810 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGCTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTCATTTTCGTACAGTCTTGGAGAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-ATTTTTCTACACATGACCATAAATATATATCTTCATGTATGCATGATG-AAGCATG----GTAACAGATTTTTT--AAT-GGAA--TAAGCT--------------------ATTATGGTACTTT-CATTCTATGAAATATTACGTAGTTCTCAATCAAAATGAGAGGGATAGCTGTATAAA-ACCTAAGCTATTGTTAACA--G--------------AAAAAAA-GCATGTAAAC------AAAATTATTAAATTATGGTTTTAAT s panTro5.chr3 202004280 493 - 202621043 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTT---------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGACGGGGTTATGTCATTTTCCTACAGTCTTGGAGAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTGTTAGAAATCTTGT-AAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-ATTTTTCTACACATGACCATAAATATATATCTTCATGTATGCATCATG-AAGCATG----GTAACAGATTTTTT--AAT-GGAA--TAAGCT--------------------ATTATGGTACTTT-CATTCTATGAAATATTACGTAGTTCTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAACTATTGTTAACA--G--------------AAAAAAA-GCATGTAAAC------AAAATTATTAAATTATGGTTTTAAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772296 496 - 205426864 atcaatattaagggaaat-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGACTAATT------------TGATAT-----TCATTTCTGGTAGGGGACGGGGTTATGTCATTTTCCTACAGTCTTGGAGAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGGTTATAt------atttttattttcacttaatatttctgctttt-atttttCTACACATGACCATAAATATATATCTTCATGTATGCATGATG-AAGCATG----GTAACAGATTTTTT--AAT-GGAA--TAAGCT--------------------ATTATGGTACTTT-CATTCTATGAAATATTACATAGTTCTTAACCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTATTAACA--G--------------AAAAAAA-GCATGTAAAC------AAAATTATTAAATTATGGTTTTAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 2527 500 - 17846 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTCATTTTCCTACAGTCTTGGAGAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-ATTTTTCTACACATGACCATAAATATATATCTTCATGTATGCATGATG-AAGCATGGTGAGTAACAGATTTTTT--AAT-GGAA--TAAGCT--------------------ATTATGGTACTTT-CATTCTATGAAATATTACATAGTTCTTAATCAAAATCAGAGGGATAGCTGTATAAA-ACCTAAGCTATTGTTAACA--G--------------AAAAAAA-GCATGTAAAC------AAAATTATTAAATTATGGTTTTAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591234 517 + 86207423 atcaatattaagggaaaa-------------ttttaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTACG------ATG-T-CTG------CATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTCATTTTCCTATAGTCTTGGAGAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGT-AAAGGTTATAC------Gtttttaatttcacttaatatttctgttttt-atttttCTACACATGACCATAAATACATATTTTCATGTATGCATGATG-AAGCATGGTGAGTAACAGATTTTTT--AAT-GGAA--TAAGCTACA---TTTTCCACAAATAGATTATGGTACTTT-CATTCTATGAAATGTTACATAGTTCTTAACCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTTTTAACA--G--------------AAAAAAA-GCACATAAAC------AAAATTATTAAATTATGGTTATAAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072404 514 + 204787373 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGGGAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-GTTTTTCTACACATGACCATAAATATATCTCTTCTTGTATGCATGATG-AAACATG----GTAATAGATTTTTTTTAAT-GGAA--TTAGCTACA---TTTTCCACAAATAGATTATGGTACTTC-CATTCTATTAAATGTTACGTCGTTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC------AAAATTATTAAATTATGGTTTTAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61004252 514 - 192460366 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGGGAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-GTTTTTCTACACATGACCATAAATATATCTCTTCTTGTATGCATGATG-AAACATG----GTAATAGATTTTTTTTAAT-GGAA--TTAGCTACA---TTTTCCACAAATAGATTATGGTACTTC-CATTCTATTAAATGTTACGTCGTTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC------AAAATTATTAAATTATGGTTTTAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11116498 514 - 17224310 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--ACTCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGGGAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-GTTTTTCTACACATGACCATAAATATATCTCTTCTTGTATGCATGATG-AAACATG----GTAATAGATTTTTTTTAAT-GGAA--TTAGCTACA---TTTTCCACAAATAGATTATGGTACTTC-CATTCTATTAAATGTTACGTCGTTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC------AAAATTATTAAATTATGGTTTTAAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17428393 513 - 41321030 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACCACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGGGAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-GTTTTTCTACACATGACCATAAATACATCTCTTCTTGTATGCATGATG-AAACATG----GTAACAGA-TTTTTAAAAT-GGAA--TTAGCTACA---TTTTCCACaaatagattatggtacttc-cattctatgaaatgttacgtcgttgttaatcaaaatgagagggatatctgtataaa-acctaagctattgttaaca--g---------------aaaaaa-gcaTGCAAAC------AAAATTATTAAATTATGGTTTTAAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64499965 512 - 101219884 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTCATTAACTAACAACCCTTATG------ATA-T-CTG------CATGCTAATACTTGT-AA--AATCAAGATAAAAT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGGGAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGT-AAAGGTTATAT------ATTTTTAATTTCACTTAATATTTCTGCTTTT-ATTTTTCTACACATGACCATCAATATATCCCTTCTTGTATGCATGATG-AAACATG----GTAATAGATTTTTT--AAT-AGAA--CTAGCTACA---TTTTCCACAAATAGATTACGGTACTTC-CATTCTATGAAATGTTATGTCATTGTTAATCAAAATGAGAGGGATATCTGTATAAA-ACCTAAGCTATTGTTAACA--G---------------AAAAAA-GCATGCAAAC------AAAATTATTAAATTATGGTTTTAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 885832 513 - 924385 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGT-AA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTATGTTGTTTTCCTATAGTCTTGGGGAGAAAATAATTTGTTAAATGT------------AATTTGCTATCATCTATTAGAAATCTTGT-GAAGGTTATAT------ATTTTTCATTTCACTTAATATTTCTGCTTTT-GTTTTTCTACACATGACCATAAATACATCTCTTCTTGTATGCATGATG-AAACATG----GTAATAGATTTTTT-AAAT-GGAA--TTAGCTACA---TTTTCCACaaatagattatggtacttc-cattctatgaaatgttacgtcgttgttaatcaaaatgagagggatatctgtataaa-atctaagctattgttaaca--g---------------aaaaaa-gcatgcaaac------aAAATTATTAAATTATGGTTTTAAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6726804 513 - 10587913 attaatattaagggaaaa-------------ttgtaccttagatataagaaaataa-ttttctaacaGCTCAAATTATACTCGGTTGTTGTTATTAACTAACAACCCTTATG------ATA-T-CTG------CATACTAATACTTGTAAA--AATCAAGATAAATT------------TGATAT-----TCATTTCTGGTAGGGGATGGGGTTGTGTTGTTTTCCTATAGTCTTGGGGAGAAAAGAATTTGTTAAATAC------------AATTTACTATCATCTATTAGAAATCTTGT-AAAGGTTATAT------ATTTTTAATTTCACTAAATATTTCTGCTTTT-ATTTTTCTACACATGACCATAAATATATCTCTTCTTATATGCATGATG-AAACATA----GTAATAGATTTTTT--AAT-GGAA--TTAGCTACA---TTTTCCACAaatagattatggtgcttc-cattctatgaaatgttatgtagttgttaatcaaaatgagagtgatatctgtataaa-atctaagctattgttaaca--g---------------aaaaaa-gcaTGTAAAC------AAAATTATTAAATTATGGTTTTAAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46061875 527 - 98464013 atcaatattaaagggaaa-------------tcttacatcagatataagaaaacaa-ttttctaacagctcaaattgtACTCAGTTGTTGTTATTAACTAACAATCCTTATGATATTAATA-T-TTGTAAAATCATACTAATACTTGT-AA--ACTCAAGATTAATT------------TCATAT-----TCATTTCTGATAGGAGATTGGGTTATGATGTTTTTCTGTAGTCTTGGTAAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGC-AAAGGTTACAT------ATTTTTAATTTCACTTAATATTTCTGTTTTT-ATTTTTCTACACATGACCATAAATATATCTCTTCATGTATGCATGATG-AAGCATGGTGGGTAATAGATTTTTTTTAAT-GGAA--TAAGCTACA---TTTTCCACAAATAGATTATGGTACTTT-CATTTTATGAAACGTTATGTAGTTCTTAATCAAAATGAGAGCAATATCTATATAAATCCCTAAGATT------ACA--G---------------AAAAAACGCATGTAAAC-----AAAAATTATTAAATTAAGGATTTAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27733497 533 + 27742158 atcaatattaaagggaaa-------------tcttgtatcagatataagaaaacaa-ttttctaacagttcaaattatacaCAGTTGTTGTCATTAACTAACAACCCTTATAATACTAATA-T-TTGTAAAATCATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGAGATCAGGTTATGATGTTTTCCTGTAATCTTGGTTAGAAAATAATTTGTTAAATGC------------AATTTACTATCATCTATTAGAAATCTTGC-AAAGGTTACAT------ATTTTTAATTTCACTTAATATTTCTGTTTTT-ATTTTTTTACACATGACCATAAATATATCTCTTCATGTATGCATGAGG-AAGCATGGCAGGTAATAGA-TTTTTTTAAT-GGAA--TAAGCTACA---TTTTCCACaaatagattatggtacttt-cattttatgaaatgttatgtagttcttaatcaaaatgagagcaatatctgtataaatccctaagatgttgttaaca--g--------------aaaaaaacacatgtaaac-----aaaaattattaaattaaggctttaat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 270891 531 - 4835464 atcaatattaaagagaaa-------------tcttatatcagatataagaaaacaa-ttttctaacagttcaaattatACTCAGTTGTTGTCATTAACTAACAACCCTTATGATCCTAATA-T-TTGTAAAATCATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGAGATCGGGTTATGATGTTTTCCTGCAATCTTGGTAAGAAAATAATTTGTTAAATGC------------AATTTGCTATCATCTATTAGAAATCTTGC-AAAGGTTACAt------atttttaatttcacttaatatttctgttttt-atttttCTACACATGACCATAAATATATCTTTTCATGTATGCATGATG-AAGCATGGTGGGTAATAGA-TTTTTTTAAT-GGAA--TAAGCTACA---TTTTCCACAAATAGATTATGGTACTTT-TATTTTATGAAATGTTATGTAGTTCTTAATCAAAAGGAGAGCAATATCTATATAAATCCCTAAGATGTTGTTAACA--G---------------AAAAAA-AAATGTAAAC-----AAAAATTATTAAATTAAGGCTTTAAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3736873 533 + 4093027 atcgatattaaagggaaa-------------tcttacatcagatataagaaaacaa-ttttctaacaGCTCAAATTATACTCAGTTGTTGTTATTAACTAACAGCCCTTATGATACTAATA-T-TTGGAAAATTATACTAATACTTGT-AA--AATCAAGATTAATT------------TGATAT-----TCATTTCTGGTAGGAGATCGAGTTATGATGTTTTCCTGTAGTCTTGGTAAGAAAATAATTTGTTAAATGC------------AATTTGCTAGCATCTATTAGAAATCTTGC-AAAGGTTGCAT------ATTTTTAATTTCACTCAATATTTCTGTTTTT-ATTTTTCTACATATGACCATAAATATATCTCTTCATGTATGCATGATG-AAGCATGGTGGGTAATAGATTTTTTTTAAT-GGAA--CAAGCTACA---TTTTCCACAAATAGATTATGGTACTTT-CATTTTATGAAATGTTACGTAGTTCTTAATCAAAATGAGAGCAATATCTCTATAAATCCCTAAGATATTGTTAACA--G---------------AAAAAATGTATGTAAAC-----AAAAATTATTAAATTAAGGCTTTAAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073017 521 + 30473821 atcaatgttaaag-aata-------------tttcatgtcagagat-aggaaacaa-ttttctaataagtcaaaTTATAATCAATTACCATTATCAACCAAGAACTCATATA------TGA-T-CTG------CAAATTATGACTTGT-AA--AATCGAGTCCAATT------------TGATAT-----CCACTTGTTATAGAGGCCTGGGTTGTGATGCTCTCGTATAATCTTGCTGCGATAATGATTTGTTAAATAC------------ACTTTGGCAGCATCTATCAAAAATCTTTTCAAAGGTTTTAT-------TCTTTCTGTTCACGTAATCATCCAATTTC---ATTTTCTATACAGGACCATAAATATATTTGTTCGTGTTTGCACTGTG-AAGCCTGATCAGTAACAGACTTTTAAAAAT-GGAA--TTAGGTAAA---CTTTCCACAAATAGATTATTGTACTTTCCATTCGAGGAAATACTGGGCAGTTCTT-ATCAAAATGAGTTGGATTTCTGTGTGAAATTCTAAGACATTGCTATTG--G---------------GGGGGG-TCAGGTGAAGGCTCTGAAAATTATTCAATCATGGTTTTAAT i otoGar3.GL873534 C 0 I 292 s mm10.chr6 45781694 500 - 149736546 GGCATTAGCAAGAGCAAATAAGACAGTGAGCTTTCAGCTTGACAGCACAAAAGCAG-TGCAGTAAGAGTTCAAGTCACACTCACCCTCCACTATTAGCAAAGCCCCCAAATA------ACC-G-CTG------C---CTTACACTGCA-AAGCAATCAGG-----TT------------TCACGC-----TGCCTCTTTATACAAG-CGATCCCATAGTGCTCTCACATAATCCTGGCTGCACAA-----TGTTAAACAC------------AA---GCTAG--------AAACATCTTTC-TATGTTTATTTTAGTAATTCCTTTATTTTGTAAAGTAAGTTCACAGTTAATTGTTCTGAATATGACTACAA-----------TGTCTGTGCATATTGAAAACATGCTTGGTAATCTATTTTGAAAAGT-GAAA--GGCGCCAGAAAGACGTCGAGAAACAGGTGATAGCACTTT-CCGGTTATCAAACATCCCATTGTTT---ATCAGAAAGGAATTGATTTCCGGGTACAAATCCAA-------TTGACATGG---------------AGAAAA-GCTTATGAAC------AAAATAACTTAATTA-GACTTTAAC i mm10.chr6 I 59 C 0 s canFam3.chr20 16607694 533 + 58134056 atcagtgttaaagggaaa-------------tttcagctcagatgtgaggagaaaatttttctaacaGCTCAAATTATAGTTAGGTG------TTAAACAATAATTCTATAG------GTATT-TTA------CAAACTAATACTTGT-AA--AACTAAGTTAGAAT------------CACTATCTCAATTGCTTTTGATAAGGAATTGAGTTATGGTACCCTCACAAAATCTTGAGGGAAATGTAATTTGTTAAATGC------------AATTTGGTACCATCTCTCAAAAAAATTTT-AATGGTTCTGG------ATTTTGGTATTCACCTAACAATTC---TTTC-ATTTTTCCACACATGATTATAAATACATCTGTTCATATTTGTTCAATG-AAGCATA-TTGGTAGTAGACTGCTTAAAACAGAAA--TATGCCAAA---TACTCCTCAAATAGATGGTGGTATTTT-GATTCTATGCAATAGTATGTGATCCTTCATCAAAATGAGTTGGATTTCTGTGTAAAAATCTAAGACGTTATTAACG--GGGGGGGAGTAGGGGAGGGGGA-GCCTATGAAC-----AGAAATGATTGAATAAAGGTTTAAAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1854320 529 - 2187301 atcaatgttaaag--agg-------------tttcatctcagatgtaaggaaatat-ttttctaacaatttgaTTTATATTCAGTTATTG---CTAAACAATAGCTCTTAC-------ATA-TGTTG------CAAACTGGTATTTGT-AA--GATGGCATTTAATTTGGAGAAGTGGATGATAT-----CCTTATTTGATAGGGGGT-------TGTTGCATTGGAGTAAATTtggtgggtatgtaatttgttaaatgcattttgaagggaaatttggcagcatctatcaaacatttt-t-aatatgtgtac------ctgtttagcttcatatagaaattcttctttc-tgttttctgcacatgagcataaatatacctgttcaactttgctcaatg-aaacatg----ataataga---aaaaaaat-ggaaaccatgataaa---tgttctaccaataCACTGCAGTACTTC-CATTTGATGAAATAATAAGTAGTTCTTTTTCA-AATGTTTTGGATTTCCCTGTAAAGCCCTAAGACACTGTTAACA--A-----------AAAAATAAAA-GGTTGAAAAT-----AGTCATTATTGAATTAAGGTTTTAAT i dasNov3.JH563077 C 0 C 0 a score=4607285.000000 s hg38.chr14_KI270725v1_random 10230 509 + 172810 AAAATCCATATATATGAATTTGGACACATGTATACACAAGT----------------AAAGTCAGAGAAAATGACAGAATATA--ATGTATGTTGAAATGATAGCAATGACTAC--CACT-AAAAAA--AAATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTATTTTTAAA--------------AAGAAAAAAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC-----AGAAGAGAGAGCTCATTGACTC----CATTTGTTCTAATAaaacaaacaaacaagcaacaaaaaacCCTATATATTTTATACAAGTAGAAACCCTATATATTTTATACAAGTAGAAA----TAACTAGC--AATATATT-TCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG s panTro5.chr3 202004773 512 - 202621043 AAAATCCATATATATGAATTTGGACACGTGTATACACAAGT----------------AAAGTCAGAGAAAATGACAGAATATA--ATATATGTTGAAATGATAGCAATGACTAC--CACT-AAAAAA--AAATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCACTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTATTTTTAAA--------------AAGAAAACAC--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTGTTCTaa-aaaacaaacaaacaagcaac-aaaAACCCTATATATTTTATACAAGTAGAAACCCTATATATTTTATACAAGTAGAAA----TAACTAGC--AATATATT-TCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204772792 514 - 205426864 AAAATCCATATATATGAATTTGGACACGTGTATACACAAGT----------------AAAGTCAGAGAAAATGACAGAATATA--ACGTATGTTGAAATGATAGCAATGACTAC--CACTAAAAAAA--AAATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTATTTTTAAA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTGTTCTaa-aaaacaaacaaacaagcaacaaaaaacCCTATATATTTTATACAAGTAGAAACCCTATATATTTTATACAAGTAGAAA----TAACTAGC--AATATATT-TCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3027 506 - 17846 AAAATCCATATATATGAATTTGGACACGTGTATACACAAGT----------------AAAGTCAGAGAAAATGACAGAATATA--ACGTATGTTGAAATGATAGCAATGACTAC--CACT--AAAAA--AAATCAGAATAGAATGGTAATTTAAAATAAATATAAGACAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAATTA-TTTTAAA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTAC-----AGAAGAGAGAGCTCATTGACTC----CATTTGTTCTaa-aaaaaaaacaaacaagcaacaaaaaacCCTATATATTTTATACAAGTAGAAACCCTATATATTTTATACAAGTAGAAA----TAACTAGC--AATATATT-TCTATAGGGAGAAATAAGCCAGCATATTTTCAACGTTCTTAAGATTTTATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67591751 511 + 86207423 AAAATCCATATATGTGAATTTGGACATGTGTATACACAAGT----------------AAAGTCAGAGAAAATAACAGAATATA--AGGTATGTTGAAATGATAGCAGTGATTAC--CACT-AAAAAA--AAATCAGAATAGAATGGTAATTTAAAATAAATATAAGAGAGCAGTGGGCAGGATGAGGACACATTTAAATCTACATAATACTGCATTG-TGTAAGCTAAAT-----TTTTCAAGACCTGCTTGTGTAACTATTTTTAAA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACACGGAAAGTGCTACCCAAAAGAAGAGAGAGCTCACTGACTC----TATTTGTTCTAA-AAAACAAACAAGCGACCAA--AAAAACCCTAAATATTTTATACAAGTAGAAACCCTATATATTTTATACGACTATAAA----TAACTAGT--AATATATT-TCTATAGGGAGAAAGAAGCCAGTATATTTTCAACATTCTTAAGATTTCATTTCTATAGCAAATAAAA-CAAGGCAAAGCCAATATTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66072918 489 + 204787373 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAGAGAAAATGACAGAATATA--ACGTATCTTGAAACGATTGCAATGATTAC--CACT-AAAAAAACAAATCAAAA-AGAATGGGAATTTAAAATAAAAGTAAAAGAGCAGTGGGCAGGATGAGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGACAATTATTCAACTATTCAACAT-GAAAGTGCTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTGTTCTA--AAAACAAACAAACACACACC-AAAAAACCTACATATTTTA------------------------------AGTACAAA----TAACTAGT--AATATATT-TCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i rheMac8.chr2 C 0 I 4 s macFas5.chr2 61004766 490 - 192460366 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAGAGAAAATGACAGAATATA--ACGTATCTTGAAACGATTGCAATGATTAC--CACT-AAAAAAACAAATCAAAATAGAATGGGAATTTAAAATAAAAGTAAAAGAGCAGTGGGCAGGATGAGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGACAATTATTCAACTATTCAACAT-GAAAGTGCTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTGTTCTA--AAAACAAACAAACACACACC-AAAAAACCTACATATTTTA------------------------------AGTACAAA----TAACTAGT--AATATATT-TCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i macFas5.chr2 C 0 I 4 s macNem1.NW_012018021v1 11117012 490 - 17224310 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAGAGAAAATGACAGAATATA--ACGTATCTTGAAACGATCGCAATGATTAC--CACT-AAAAAAACAAATCAAAATAGAATGGGAATTTAAAATAAAAGTAAAAGAGCAGTGGGCAGGATGAGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGACAATTATTCAACTATTCAACAT-GAAAGTGCTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTGTTCTA--AAAACAAACAAACACACACC-AAAAAACCTACATATTTTA------------------------------AGTACAAA----TAACTAGT--AATATATT-TCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i macNem1.NW_012018021v1 C 0 I 16 s cerAty1.NW_012009469v1 17428906 481 - 41321030 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAGAGAAAATGACAGAATACA--ACGTATGTTGAAACAATCGCAATGATTAC--CACT-AAAAAAA-AAATCAAAATAGAATGAGAATTTTAAATAAAAGTAAGAGAGCAGTGGGCAGGATGCGGACACATTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGA--------------AAGAAAAGAG--------GTTTGTTTCC----TTGTGTTGACAAT--------TATTCAACAT-GAAAGTGTTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTATTCTA--Aaaacaaacaaacaaacacc-aaaaaacCTACATATTTTA------------------------------AGTAGAAA----TAACTAGT--AATATATT-TCTACAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i cerAty1.NW_012009469v1 C 0 I 4 s chlSab2.chr22 64500477 482 - 101219884 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAAAGAAAATGACAGAATATA--ACGTATGTTGAAACGATAGCAATGATTAC--CACT-AAAAAAACAAATCAAAATACAATGGGAATTTAAAATAAAAGTAAGAGAGCAGTGGACAGGATGAGGACACATTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTACA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGACAGT--------TATTCAACAT-GAAAGTGCTACCTAAAAGAAGAAAGAGCTCATTGACTC----CATTTGTTCTA--AAAACAAACAAACAAACACC-AGAAAACCTACACATTTTA------------------------------AGTAGAAA----TAACTAGT--AATATATT-TCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTTTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATACTG i chlSab2.chr22 C 0 I 48 s manLeu1.NW_012098965v1 886345 482 - 924385 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAGAGAAAATGACAGAATATA--ATGTATGTTGAAACAATCGCAATGATTAC--CACT-AAAAAAGCAAATCAAAATAGAATGAGAATTTAAAATAAAAGTAAGAGAGCAGTGGGCAGGATGCGGACACGTTTAAATCTACATAATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTGCCTGGGAAATTATTTTTAGA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGACAAT--------TATTCAACAT-GAAAGTGCTACCTAAAAGAAGAGAGAGCTCATTGACTC----CATTTATTCTA--Aaaacaaacaaacaaacacc-aaaaaacCTACATATTTTA------------------------------AGTAGAAA----TAACTAGT--AATATATT-TCTATAGGGAGAAATAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i manLeu1.NW_012098965v1 C 0 I 4 s colAng1.NW_012114711v1 6727317 480 - 10587913 AAAATCCATATATGTGAATTTGGACATGTGTATACACATGT----------------AAAGTCAGAGAAAATGACAAAATATA--ACGCATGTTGAAACGATAGCAATGTTTAC--TACt-aaaaaaacaaataaaaatagaatgggaatttaaaataaaaGT--GAGAACAGTGGGCAGGATGAGGACACACTTAAATCTACATGATACTGCACTG-TGTAAGCTGAAT-----TGTTCAAGACCTACCTGGGAAATTATTTTTAGA--------------AAGAAAACAG--------GTTTGTTTCC----TTGTGTTGACAAT--------GATTCAACAT-GAGAGTGCTACCTAAAAGAAGAGAGAGCGCATTGACTC----CATTTGTTCTA--Aaaacaaacaaacaaacacc-aaaaaacCTACATATTTTA------------------------------AGTAGAAA----TAACTAGT--AGTATATT-TCTATAGGGAGAAACAAGCCAGTATGTTTTCAACGTTCTTAAGATTTCATTTCTAAAGCAAATAAAA-CAAGGCAAAGCCAATATTG i colAng1.NW_012114711v1 C 0 I 4 s calJac3.chr15 46062402 422 - 98464013 AAAATCCATATATGTGAATTTGAACACATGT---------------------------AAATCAGAGAAAATGACAGAATAT---ATGTGTGTTGAAACAATAACAATGATTAC--GACT-AA------AAATCAGAATAGAATTAGGATTTAAAGTAAAAGTAAGAGGGAAGTGGGCAGGATGGA----CACTTAAATCTATCTAATACTGCATCG-TGTATGGT-----------------------------AATTATTTTTAAA--------------AAGAAAACAT--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTACCTAAAAGAAGAGAGAGCTCAATGACTC----CATTTGTTCT---AAAAAAAAAA-----------AAAAAAGCTGTACGTTTTATAAA--------------------------AGTAGAAA----TAGTTAGT--AATATATA-CCTATAGGGAGAAACGAGCCAGTTTATTTTAAACTTTCTTAAGGTTTAATTTGTAAAGCAAATAAAA-CAAGGCAAAGC-------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734030 432 + 27742158 aaaaaccatatatgtgaatttgaacacatgt---------------------------aaatc-gagaaaatgacagaatgt---atgtgtgttgaaacaataacaatgattat--GACT-AA------AAATAAGAATAGAATTAGGATTTAAAGTAAAAGTAAGAGGGAAGTGGGCAGGATGGG----CACTTAA----ATCTAATACTGTATCA-TGTATGGTAAAT-----TATTCAAGACCTGCCTATGCAATTATTTTTAAA--------------AAGAAAACAT--------GTTTGCTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAAGTGCTACCTAAAAG----GAGAGCTCAGTGACTC----CATTTGCTC--------AAAAAA-----------AAAAAAGCTATATATTTTATAAA--------------------------AGTAGAAA----TATTTAGT--AATATATA-CCTACAGGGAGAAATGAGCAAGTTTATTTTAAACGTTCTTAAGGTTTAATTTGTAAAGCAAATGAAA-CAAGGCAAAGC-------- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271422 442 - 4835464 AAAAGCCATATATGTGAATTTGAACACATGT---------------------------AAATCAGAGAAAATGACAGAATAT---ATGTGTGTTGAAACAATAACAATGATTAA--GACT-AC------AAATCAGAATAGAATTAGGATTTAAAGTAAAAGTAAGAGGGAAGTGGGCAGGATGGG----CATTTAAATCTATCTAATACTGTATCA-TGTATGGTAAAT-----TATTCAAGACCTGCCTATGTAATTATTTTTAAA--------------AAGAAAACAT--------GTTTGTTTCC----TTGTGTTGAGAAT--------TATTCAACATGGAAATTGCTACCTAAAAGAAGAGAGAGCTCAATGACTC----CATTTGTTCC---AAAAAAAAAA-----------AAAAAAGCTATATATTTTATAAA--------------------------AGTAGAAA--------TAGA--AATATATA-CCTATACGGATAAATGAGCCAGTTTATTTTAAACGTTCTTAAGGTTTAATTTGTAAAGCAAATAAAA-CAAGGCAAAGC-------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737406 442 + 4093027 AAAATCCATATATGTGAATTTGAACACATGT---------------------------AAATCAGAGAAAATGACAGAATAT---ATGTGTGTTGAAACAATAACAATGattac--tact-aa------aaatcagaatagaattaagatttaaagtaaaagtaaGAGGGAAGTGGGCAGGATGGA----CGCTTAAATCTGTCTAATACTGCATCG-TGTATGGTAAAT-----TATTCAAGACCTGCCTATGTGATTATTTTTAAA--------------AAGAAAACAT--------GTTTGTTTCC-----TGTATTGAGAAT--------TATTCAACATGGAAAGTGCTACCTAAAAGAAGAGAGAGCTCAATGACTC----CATTTGTTCTa--aaaaaaaaaa-----------aaaaaaGCTATATGTTTTATAAG--------------------------AGTAGAAA--------TAGT--AATATATA-CCTATAGGGAGAAATGAGCCAGTTTATTTTAAACGTTCTTAAGGTTTAATTTGTAAAGCAAATAAAA-CAAGGCAAAGC-------- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11073830 470 + 30473821 aaaATTCATATATGTGAATTTGGACACGTATGCACACATGT----------------ATGTGCATAGACTATAGCAGAAATAA--ATACATACTAATACGATAGCAATGATTAC---ACC-GA------AGTTCAAAATAGGATAGAAATTTAAAATAGAAATGACAGAGTAGCTGGCAGAGGGGACACATTTCTAAGTCTATATAATGCTATATAG-TTTAAGCTCTATTATTATATTTAACTATTACCTGTGTCACTATTtttaaa--------------aataaaaaag--------gattctcttt----ttg-gggggtaat--------tacttaaaatggcaagtgctacctaaaagagaagggaGCTCACTGCATCTGTTCAATTTTCCTA--A--------------------AAAAATCCCAGATAGTCCCAACA--------------------------GGTGAAAA----TAGATAGC--TATGTATTATCTATAGGAGACAAGGCTCTGGAACGTTTTGAATGTTCTTAAGTTTTCACATGTAAAGCAGAGAAAA-CAAGGCTAAGCCAATATTA i otoGar3.GL873534 I 292 C 0 s mm10.chr6 45782194 439 - 149736546 AAGATCCGTATAGGTGAATTTGGATATATATAGACACCAA-----------------AAATCTATAAAAAATGACAGAAGAAATTTTGCACTATGTATAAACTAAAATGGTTATGTGACT-CTATGG--CCATCAGAACGGAGATGGAAT-----GTGGAAATAAGAGGGCTGAGCGAGGAGCAGAGATACTTTTAACTCTGTAGTGTAGTGAATTG-TATA-------T-----GTCCCAAGAGTTGCCTGGGTGATTATGTTTGAA--------------ATGAAACTAT--------GGGTTCTCTC-----------AAAAAT--------TATTCAACAT-GGAAAAATTGCATGCATGTGGGGAAATGT-------------TCTCTGTTTTA-----------------------GAAGCATTCATCCATTTCC-ACA--------------------------AGTTGGAA----GAATTAGC--ATCATGTA-TTTAAAGAAGGAAGTGAGCTGGCACATTCTCACTGTTTTTAGGATTTTATTTGTTAAGCAAGAAAAACCAACACTGAGTAAATATTA i mm10.chr6 C 0 C 0 s canFam3.chr20 16608227 466 + 58134056 AAAATCCATATATGTGAATTTGAacacacacacacatatatatatacacacacaTTCAAATTCTTATAAAATGATAGAAGAAA--ATAGGTATTAAAATGGTAACAGTGGTTAC--TACT-AA------AGATCAGTACAG-------ATTTAAAATCAGACGAAGAGAACTATGGGGGGTGAGGGATTACTTTTAAATCTACACAATTCTACATTT-TTTCAGCTATAT-----TATTCAAGGATTGCTTGTGTAATTATTTTAAAAAAATGAAACAAAACAAAAACACAA--------GTTTGTCTGCCTTTTTGTTGTAAGAAC--------CATCTCACATGGAAAGTGCTGCCT---------GAGAGCTCATGGACTA----TTTATTCTCTT-----------------------AAAAACTCTATATATTCTCCACA--------------------------ACTAGAAA--------TAGG--TATATGTG-T--------GAAAATGAGCTGCTATATTTTGAATGTTCTTAAGATTTTATTTATAAAGTAAATAAA--CAAGGCTAAGCCAATATTG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1854849 454 - 2187301 Aatatccctctgtgtgaatgtggacacatgt--gcatatgc----------------aaatgcatagaaaatgatgggagaaa--atatatgc--aaaaaatgataatgattac--tact-ga------agaTC-----AGAATTAAGGTTTAAAAAAGGAATAAGAGAAG-------GGGTTTTTATCACTTTTAAATCTACACAATTCTGCATCATTTTAAGCTATAT-----GATTTAACCACTGCC-ATGTAATTATTTTTCCA--------------AAGAAACCAAgtttgtttgtttgtttct----ttgtttTGAGATT--------TACCCAACATGGAATGTGCTACCTAAGAGAGCAGAGAGTTCACTGATTCTCT-TGTTTATTCCT--TG-------------------AAAAAATCTA----TTTCATGCA--------------------------GGTAGAAAAAAAAAACTAGCAAAATATATT-TACATAGGGGAAAATGAGCTTGTGCATTTTGAATGTGCTTGAACTTACTTT------GCAAATAAAA-CAAGGCTAAGCCAATAATG i dasNov3.JH563077 C 0 I 9 a score=-19267.000000 s hg38.chr14_KI270725v1_random 10739 14 + 172810 T-------------------AAAAAAAATTAAT s panTro5.chr3 202005285 23 - 202621043 T----------aaaaaaaaaaaaaaaaaTTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773306 33 - 205426864 GTaaaaaaaaaaaaaaaaaaaaaaaaaCTTAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3533 21 - 17846 T------------AAAAAAAAAAAAAAATTAAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592262 19 + 86207423 T--------------AAAAAAAAAAAAATTAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073411 13 + 204787373 ----------------taaataaataaat---- i rheMac8.chr2 I 4 I 7 s macFas5.chr2 61005260 13 - 192460366 ----------------taaataaataaat---- i macFas5.chr2 I 4 I 7 s macNem1.NW_012018021v1 11117518 13 - 17224310 ----------------taaataaataaat---- i macNem1.NW_012018021v1 I 16 I 7 s cerAty1.NW_012009469v1 17429391 13 - 41321030 ----------------taaataaataaat---- i cerAty1.NW_012009469v1 I 4 I 7 s manLeu1.NW_012098965v1 886831 13 - 924385 ----------------taaataaataaat---- i manLeu1.NW_012098965v1 I 4 I 7 s colAng1.NW_012114711v1 6727801 13 - 10587913 ----------------taaataaataaat---- i colAng1.NW_012114711v1 I 4 I 15 s otoGar3.GL873534 11074300 14 + 30473821 --------------TAAGAAAAATTAAA----- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782633 13 - 149736546 --------------CAGAAAAACCTAA------ i mm10.chr6 C 0 C 0 s canFam3.chr20 16608693 13 + 58134056 ---------------AAAAGGAATTAAA----- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855312 14 - 2187301 --------------GAAAAGCAATTAAA----- i dasNov3.JH563077 I 9 C 0 e saiBol1.JH378125 27734462 0 + 27742158 C e aotNan1.NW_018502033v1 3737848 0 + 4093027 C e cebCap1.NW_016107467v1 271864 0 - 4835464 C e calJac3.chr15 46062824 0 - 98464013 C e chlSab2.chr22 64500959 48 - 101219884 I a score=1819735.000000 s hg38.chr14_KI270725v1_random 10753 157 + 172810 CCTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTTTC---TCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA s panTro5.chr3 202005308 157 - 202621043 CCTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTTTC---TCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------Tccaggaagatga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773339 158 - 205426864 CCTAAGTACTACAATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTTTC---TCAATAGTTGAATGTAAG-TATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3554 157 - 17846 CCTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACATTTAAAATTTTTC---TCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592281 157 + 86207423 CCTAAGT-CTAC-ATGAACTTAGCTGGGTACCAGTTGAGATATTTGAAGTTAAT-CTACCCTGTAGTCTTCACATTTAAAATTTTTC---TCAGTAGTTGAATGTAAGTTATTTACTTCTAGATTGAACAATAAAATGTAAATGGAGGCT------TCCAGGAAGAGGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073431 157 + 204787373 CCTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i rheMac8.chr2 I 7 C 0 s macFas5.chr2 61005280 157 - 192460366 CCTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAAAAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i macFas5.chr2 I 7 C 0 s macNem1.NW_012018021v1 11117538 157 - 17224310 CCTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAAAAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i macNem1.NW_012018021v1 I 7 C 0 s cerAty1.NW_012009469v1 17429411 157 - 41321030 CCTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i cerAty1.NW_012009469v1 I 7 C 0 s chlSab2.chr22 64501007 157 - 101219884 CCTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i chlSab2.chr22 I 48 C 0 s manLeu1.NW_012098965v1 886851 157 - 924385 CCTAAGT-CTAC-ATGAACTTAGTTGGGTACCAGTTGAGATATTTGAAGTTTAC-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATCGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i manLeu1.NW_012098965v1 I 7 C 0 s colAng1.NW_012114711v1 6727829 157 - 10587913 CCTAAGT-CAAC-ATGAACTTAGTTGGGTGCCAGTCGAGATATTTGAAGTTTAT-CTACCCTGTAGTCCTCACACCTAAAATTTTTC---TCAATAGTTGAATGTAAGTTATTTACTTCTGGATTGAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i colAng1.NW_012114711v1 I 15 C 0 s calJac3.chr15 46062824 137 - 98464013 ---------------------AG-TGGGTACCattttaaatatttaaattttat-CTACCCTGTAGTCTTCCCAGTTAAAATTTTTC---TTAATCTTTGAATATAAGTTATTTATTTCTGGATTAAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGATGA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734462 138 + 27742158 ---------------------AGTTGGGTACCAGTTGAAATATTTGAATTTTAT-CTACCCTGTAATCCTCCCATTTAAAATTTTTC---TTAATCTTTGAATGTAAGTTATTTATTTCTGGATCAAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGACGA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 271864 138 - 4835464 ---------------------AGTTGGGTACCCGTTGAAATATTTGAATTTTAT-CTGCCTTGTAGTCCTCCCATTTAAAATTTTTC---TTAATCTTTGAATGTAAGTTATTTATTTCTGGATCAAACAATAAAATGTAAATGGAGATT------TCCAGGAAGATGA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737848 138 + 4093027 ---------------------AGTTGGATACCAGTTGAAATATTTAAATTTTAT-CTACCCTGTAGTCCTCCCATTTAAAATTTTTC---TTAATCTTTGAATGTAAGTTATTTATTTCTGGATCAAACAATAAAATGTAAATGGAGGTT------TCCAGGAAGACGA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074314 149 + 30473821 TCTAAGT-CAAC-ATGAATTGACTTGGGTACCACTTGAGATATTTG-ATTTGAT-CTGAGCCATAGTCTGCACACTTAAAATTTTCC---TC----CTCAAAGGT---TTATTTACTTCTTGGTGAAACAATAAAATGCAAATGGAGTTT------TCCAGGAAGATGA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782646 167 - 149736546 CCTTAGT-TTGC-ATTAATTTACTTGAGTGCTGGCTGAAATGTTTGTACTCTGTGGTATTTTGTTGTCATCAGAGTTGGAACCTTCCATTTCAACAACTTACTTTAAATAATGGACTTGCTGATGGAATGGTAGAATATACATGAAATATATATTATATATAAAGATAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16608706 160 + 58134056 CTTAAGT-CAGC-ATTAATTTAGTTGTGTACACTTTGCAATATTTGTATTTTAT-CTGCCCTATCATCCTCACATTTAAAATGTTCCTCCTCAACAGTTTAGTGTTAGGTATATATTTACTGTTGGAACAAGGAAATGCAAATGGAGGTT------TCCAGGAAGATGA i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1855326 156 - 2187301 CCTATGT-CAGC-ATTTATTTAG-TGAGTACAACCTGAGATATATGTATTCTAT-CTGCTCTATAGGCCTCACATTTACAATTTTCC---TCAGTACTTTACTGTAAGTTATTCATATAGTGATGGAGCAATGAAATCCAAATGGAAATT------TCCAGGAGATGGA i dasNov3.JH563077 C 0 C 0 a score=159168.000000 s hg38.chr14_KI270725v1_random 10910 12 + 172810 ATTGAGTGTGCC s panTro5.chr3 202005465 12 - 202621043 actgagtgtgcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773497 12 - 205426864 ACTGAGTGTGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3711 12 - 17846 ATTGAGTGTGCC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592438 12 + 86207423 ATTGAGCGTGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073588 12 + 204787373 ATTGAGTGTGCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005437 12 - 192460366 ATTGAGTGTGCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117695 12 - 17224310 ATTGAGTGTGCC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429568 12 - 41321030 ATTGAGTGTGCC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501164 12 - 101219884 ATTGAGTGTGCC i chlSab2.chr22 C 0 I 14 s manLeu1.NW_012098965v1 887008 12 - 924385 ATTGAGTGTGCC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727986 12 - 10587913 ATTGAGTGTGCC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062961 12 - 98464013 ATTAAGTGTGCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734600 12 + 27742158 ATTGAGTGTGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272002 12 - 4835464 ATTGAGTGTGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3737986 12 + 4093027 ATTGAGTGTGCC i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45782813 12 - 149736546 AGTGAGGATGCC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608867 12 + 58134056 ATGGAGTGTGCC i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1855482 12 - 2187301 AAGGAGTTTATC i dasNov3.JH563077 C 0 C 0 e otoGar3.GL873534 11074463 0 + 30473821 C a score=13923.000000 s hg38.chr14_KI270725v1_random 10922 1 + 172810 A s panTro5.chr3 202005477 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773509 1 - 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3723 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592450 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073600 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005449 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117707 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429580 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s manLeu1.NW_012098965v1 887020 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6727998 1 - 10587913 A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062973 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734612 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272014 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 I 13 s aotNan1.NW_018502033v1 3737998 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 I 13 s mm10.chr6 45782825 1 - 149736546 A i mm10.chr6 C 0 C 0 s canFam3.chr20 16608879 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855494 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e otoGar3.GL873534 11074463 0 + 30473821 C e chlSab2.chr22 64501176 14 - 101219884 I a score=16038.000000 s hg38.chr14_KI270725v1_random 10923 2 + 172810 TA s panTro5.chr3 202005478 2 - 202621043 ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773510 2 - 205426864 TA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3724 2 - 17846 TA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592451 2 + 86207423 TA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073601 2 + 204787373 TA i rheMac8.chr2 C 0 I 11 s macFas5.chr2 61005450 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117708 2 - 17224310 TA i macNem1.NW_012018021v1 C 0 I 11 s cerAty1.NW_012009469v1 17429581 2 - 41321030 TA i cerAty1.NW_012009469v1 C 0 I 11 s manLeu1.NW_012098965v1 887021 2 - 924385 TA i manLeu1.NW_012098965v1 C 0 I 11 s colAng1.NW_012114711v1 6727999 2 - 10587913 TA i colAng1.NW_012114711v1 C 0 I 11 s calJac3.chr15 46062974 2 - 98464013 CA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734613 2 + 27742158 CA i saiBol1.JH378125 C 0 C 0 s mm10.chr6 45782826 2 - 149736546 TA i mm10.chr6 C 0 I 3 s canFam3.chr20 16608880 2 + 58134056 CA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855495 2 - 2187301 CA i dasNov3.JH563077 C 0 C 0 e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e chlSab2.chr22 64501176 14 - 101219884 I a score=5316.000000 s hg38.chr14_KI270725v1_random 10925 2 + 172810 ct s panTro5.chr3 202005480 2 - 202621043 ct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773512 2 - 205426864 ct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3726 2 - 17846 ct i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592453 2 + 86207423 TT i nomLeu3.chr21 C 0 I 9 s macFas5.chr2 61005452 2 - 192460366 TT i macFas5.chr2 C 0 I 9 s calJac3.chr15 46062976 2 - 98464013 TT i calJac3.chr15 C 0 I 9 s saiBol1.JH378125 27734615 2 + 27742158 TT i saiBol1.JH378125 C 0 I 9 s canFam3.chr20 16608882 2 + 58134056 TT i canFam3.chr20 C 0 I 7 s dasNov3.JH563077 1855497 2 - 2187301 TT i dasNov3.JH563077 C 0 I 6 e mm10.chr6 45782828 3 - 149736546 I e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e rheMac8.chr2 66073603 11 + 204787373 I a score=5386.000000 s hg38.chr14_KI270725v1_random 10927 6 + 172810 gcctgc s panTro5.chr3 202005482 6 - 202621043 gcctgc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773514 6 - 205426864 gcctgc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3728 6 - 17846 gcctgc i gorGor5.CYUI01007532v1 C 0 C 0 s canFam3.chr20 16608891 6 + 58134056 GCTTGC i canFam3.chr20 I 7 C 0 e mm10.chr6 45782828 3 - 149736546 I e dasNov3.JH563077 1855499 6 - 2187301 I e saiBol1.JH378125 27734617 9 + 27742158 I e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e macFas5.chr2 61005454 9 - 192460366 I e rheMac8.chr2 66073603 11 + 204787373 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=318163.000000 s hg38.chr14_KI270725v1_random 10933 602 + 172810 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaggagagcagtggtgttcccagcacgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggagtcaccccccagtaggggcagactgacacctcacacagcgggtactcctctgagacaaaacttgcagaggaacgatcagacagcagcattcgcggttcatgaaaatccgctgttctgcagccaccgctgctggtacccaggcaaacagcgtctggagtggacctctagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcgcctctcctcctccaaaggaacgcagctcctcaccagcaacagaacaaagctgga s panTro5.chr3 202005488 600 - 202621043 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaagagagcagtggtgttcccagcatgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcggcctaactgggaggcatcccccagtaggggcagactgacacctcacacagcgggtactcctctgagacaaaactttcagaggaacgatcagacagcagcattcgcggttcatgaaaatccgctgttctgcagccaccgcggctggtacccaggcaaacagggtctggagtggacctctagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaaaagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcagaaaaac--gaaactctaaaaagcagagcgcctctcctcctccaaaggaacgcagctcctcaccagcaacggaacaaagctgga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204773520 588 - 205426864 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaaga------------ctgcagacttaaatgtccctgtctgacagctttgaagagagcagtggtgttcccagcatgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtagaggcagactgacacctcacacagcgggtactcctctgagacaaaacttccagaggaacgatcagacagcaacatttgcggttcatgaaaatccgctgttctgcagccaccgcggctggtatccaggcaaacagggtctggagtggacctctagcaaactccaacagaactgcagctgagggtcctgtctgttagaaggaaaactaacaaaaagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaatcacaaagatggggaaaaaacagagcagaaaaac--gaaactctaaaaagcagagcgcctctcctcctccaaaagaacgcagctcctcaccagcaacggaacacagctgga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 3734 597 - 17846 ctctgtaggctccacctctgggggcagggcacagacaaacaaaaagacagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaaga-agcagtggtgttcccagcacgcagctggagatctgagaactggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacag-gggtact-ctctgagacaaaacttccagaggaacgatcagacagcagcattcgcggttcatgaaaatccgctgttctgcagccaccgctgctagtacccaggcaaacagggtctggagtggacctccagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacaga-cagaaaaactggaaactctaaaaagcagag-gcctctcctcctccaaaggaacacagctcctcaccagcaatggaacaaagctgga i gorGor5.CYUI01007532v1 C 0 I 2 e mm10.chr6 45782828 3 - 149736546 I e dasNov3.JH563077 1855499 6 - 2187301 I e canFam3.chr20 16608897 0 + 58134056 C e saiBol1.JH378125 27734617 9 + 27742158 I e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e macFas5.chr2 61005454 9 - 192460366 I e rheMac8.chr2 66073603 11 + 204787373 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=64385.000000 s hg38.chr14_KI270725v1_random 11535 245 + 172810 cagagaatgacttcaacgagtcgagagaagaaggcttcagatgatcagactactccaagctacaggaggaaatccaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagacgaatgtataactagaataaccaatacagagaagtgctttaaaggagctgatggagctgaaagccaaggctcaagaactacgtgaagaatgcagaagcctcaggagccaatgcgatcaactggaaga s panTro5.chr3 202006088 244 - 202621043 cggagaatgactttgacgagtcgagagaagaaggcttcagatgatcagactactccaagctacaggaggaaatccaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagacgaatgtataactagaataaccaatacagagaagcgc-ttaaaggagctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccaatgcgatcaactggaaga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204774108 243 - 205426864 cggagaatgacttcgacgagtcgagagaagaaggcttcagatgatcagactactccaagctacaggaggaaatccaaacaaaaggcgaagaagttaaaaactttgaaaaaaa-ttagacgaatgtataactagaataaccaatacagagaagtgc-ttaaaggagctgatggagctgaaagccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgagatcaactggaaga i panPan2.chr3 C 0 C 0 e gorGor5.CYUI01007532v1 4331 2 - 17846 I e mm10.chr6 45782828 3 - 149736546 I e dasNov3.JH563077 1855499 6 - 2187301 I e canFam3.chr20 16608897 0 + 58134056 C e saiBol1.JH378125 27734617 9 + 27742158 I e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e macFas5.chr2 61005454 9 - 192460366 I e rheMac8.chr2 66073603 11 + 204787373 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=737232.000000 s hg38.chr14_KI270725v1_random 11780 1351 + 172810 aagggtatcagtgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctgattggtgtacctgaaagtgac-gggagaatggaaccaagttggaaaacactctgcagggtattatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaacaccacaaagatactcctcgagaagagcaactccaagacacgtaattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcggatctctcggcagaaaccctacaagccagaagagagtgggggccaatatttaacattcttaaagaaaagaattttcaacccagaatttcatatccagcctaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttatcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcatcatgacaggatcaacttcacacataacaatattaactttaaatgtaaatggattaaatgctccaactaaaagacacagactggcaaattggataaagagtcaagacccaacagtgtgctgtattcaggaaactcatctcacatgcagagacacacataggctcaaaatgaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcagggtttgcaatcctagtctctgataaaacagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacacaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaatcgacatctgcagaactctccaccccaaatcaacagaatatacattttttcagcaccacaccacacctattccaaaattgaacacat s panTro5.chr3 202006332 1352 - 202621043 aagggtatcagtgatggaagatgaaatgaatgaaatgaagcgaaaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcagatctctcggcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatttcataaccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaagcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaacgagcaaaatcaccagctaacatcataatgacaggatcaaattcacatataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaactcatctcacgtgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcaggggttgcaatccacgtctctgataaaacagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataacaaggggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagcggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttagcaccacaccacacctattccaaaattgagcacat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204774351 1352 - 205426864 aagggtatcagcgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgaaggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcagatctctcgggagaaattctacaagccagaagagagtgggggccaatattcaacattcttaaataaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttctcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcataatgacaggatcaacttcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctatattcaggaaactcatctcacgtgcagagacatacataggctcaaaataaaaggatggaggaagatctaccaagccaatggaaaacaaaaaaaggcaggggttgcaatccacgtctctgataaaacagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataacaatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttagcaccacaccacacctattccaaaattgaacacat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 4333 1350 - 17846 aagggtatcagtgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatcagattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcagggtattatccaggagaactt-cccaatctagcaaggcaggccaatattcagagtcaggaaatacagagaatgccacaaagatactcctcgagaagagcaactccaagacacgtaattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggttacccacaaagggaagcccatcagactaacagcggatctctcggcagaaactctacaagccagaagagagtgggggccaatatttaacattcttaaagaaaagaattttcaacccagaatttcatatccagcctaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggctaggaagaaactgcatcaactaccgagcaaaataaccagctaacatcataatgacaggatcaacttcacacataacaatattaactttaaatgtaaatggactaaatgctccaactaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaactcatctcacatgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcagggtttgcaatcctagtctctgataaaacagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatatacatttttttagcaccacaccacacctattcc-aaattgaacacat i gorGor5.CYUI01007532v1 I 2 C 0 e mm10.chr6 45782828 3 - 149736546 I e dasNov3.JH563077 1855499 6 - 2187301 I e canFam3.chr20 16608897 0 + 58134056 C e saiBol1.JH378125 27734617 9 + 27742158 I e otoGar3.GL873534 11074463 0 + 30473821 C e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e macFas5.chr2 61005454 9 - 192460366 I e rheMac8.chr2 66073603 11 + 204787373 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=10743.000000 s hg38.chr14_KI270725v1_random 13131 20 + 172810 agttggaagtaaagctctcc s panTro5.chr3 202007684 20 - 202621043 agttggaagtaaagctctcc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775703 20 - 205426864 agttggaagtaaagctctcc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5683 20 - 17846 agttggaagtaaagcgctcc i gorGor5.CYUI01007532v1 C 0 C 0 s otoGar3.GL873534 11074463 19 + 30473821 AGTGGAGAGTGTCAC-CTTT i otoGar3.GL873534 C 0 C 0 e mm10.chr6 45782828 3 - 149736546 I e dasNov3.JH563077 1855499 6 - 2187301 I e canFam3.chr20 16608897 0 + 58134056 C e saiBol1.JH378125 27734617 9 + 27742158 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e macFas5.chr2 61005454 9 - 192460366 I e rheMac8.chr2 66073603 11 + 204787373 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=5240.000000 s hg38.chr14_KI270725v1_random 13151 7 + 172810 tcagcaa s panTro5.chr3 202007704 7 - 202621043 tcagcaa i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775723 7 - 205426864 tcagcaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5703 7 - 17846 tcagcaa i gorGor5.CYUI01007532v1 C 0 C 0 s otoGar3.GL873534 11074482 7 + 30473821 TTAATAG i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45782831 7 - 149736546 TTAATAT i mm10.chr6 I 3 C 0 e dasNov3.JH563077 1855499 6 - 2187301 I e canFam3.chr20 16608897 0 + 58134056 C e saiBol1.JH378125 27734617 9 + 27742158 I e aotNan1.NW_018502033v1 3737999 13 + 4093027 I e cebCap1.NW_016107467v1 272015 13 - 4835464 I e calJac3.chr15 46062978 9 - 98464013 I e colAng1.NW_012114711v1 6728001 11 - 10587913 I e manLeu1.NW_012098965v1 887023 11 - 924385 I e chlSab2.chr22 64501176 14 - 101219884 I e cerAty1.NW_012009469v1 17429583 11 - 41321030 I e macNem1.NW_012018021v1 11117710 11 - 17224310 I e macFas5.chr2 61005454 9 - 192460366 I e rheMac8.chr2 66073603 11 + 204787373 I e nomLeu3.chr21 67592455 9 + 86207423 I a score=43146.000000 s hg38.chr14_KI270725v1_random 13158 3 + 172810 ttg s panTro5.chr3 202007711 3 - 202621043 ttg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775730 3 - 205426864 ttg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5710 3 - 17846 ttg i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592464 3 + 86207423 TTG i nomLeu3.chr21 I 9 C 0 s rheMac8.chr2 66073614 3 + 204787373 TTG i rheMac8.chr2 I 11 C 0 s macFas5.chr2 61005463 3 - 192460366 TTG i macFas5.chr2 I 9 C 0 s macNem1.NW_012018021v1 11117721 3 - 17224310 TTG i macNem1.NW_012018021v1 I 11 C 0 s cerAty1.NW_012009469v1 17429594 3 - 41321030 TTG i cerAty1.NW_012009469v1 I 11 C 0 s chlSab2.chr22 64501190 3 - 101219884 TTG i chlSab2.chr22 I 14 C 0 s manLeu1.NW_012098965v1 887034 3 - 924385 TTG i manLeu1.NW_012098965v1 I 11 C 0 s colAng1.NW_012114711v1 6728012 3 - 10587913 TTG i colAng1.NW_012114711v1 I 11 C 0 s calJac3.chr15 46062987 3 - 98464013 TTG i calJac3.chr15 I 9 C 0 s saiBol1.JH378125 27734626 3 + 27742158 TTG i saiBol1.JH378125 I 9 C 0 s cebCap1.NW_016107467v1 272028 3 - 4835464 TTG i cebCap1.NW_016107467v1 I 13 C 0 s aotNan1.NW_018502033v1 3738012 3 + 4093027 TTG i aotNan1.NW_018502033v1 I 13 C 0 s otoGar3.GL873534 11074490 3 + 30473821 TTG i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45782838 3 - 149736546 TTG i mm10.chr6 C 0 C 0 e dasNov3.JH563077 1855499 6 - 2187301 I e canFam3.chr20 16608897 0 + 58134056 C a score=11709.000000 s hg38.chr14_KI270725v1_random 13161 1 + 172810 t s panTro5.chr3 202007714 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775733 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5713 1 - 17846 t i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592467 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073617 1 + 204787373 T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005466 1 - 192460366 T i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117724 1 - 17224310 T i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429597 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501193 1 - 101219884 T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887037 1 - 924385 T i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728015 1 - 10587913 T i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062990 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734629 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 272031 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738015 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074493 1 + 30473821 T i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782841 1 - 149736546 A i mm10.chr6 C 0 C 0 s dasNov3.JH563077 1855505 1 - 2187301 T i dasNov3.JH563077 I 6 C 0 e canFam3.chr20 16608897 0 + 58134056 C a score=11626623.000000 s hg38.chr14_KI270725v1_random 13162 807 + 172810 CTATGTTTTTATGTAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAGGTTTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCAGCTTCAGGTTCCGTTGTCAACCTACCCCATATGTATAAACCATCTGTTTGTCATGTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCCGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CGTCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGATAGTACCGAgagac--tg--atagatct-atct-aaaatgaaggg--tatgga-cattgccataaaagccTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAACGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG---------AAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCAGAAACATTAAAAGCAGAAAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC s panTro5.chr3 202007715 808 - 202621043 CTATGTTTTTATGAAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAGGTTTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCAGCTTCAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCTTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGGTAGTACCGAgagac--tg--acagatct-atct-aaaatgaaggg--tatgga-cattgccataaaagccTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG--------AAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCGGAAACATTAAAAGCACAGAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204775734 808 - 205426864 CTATGTTTTTATGAAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAGGTTTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCAGCTTCAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCTTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGGTAGTACCGAgagac--tg--acagatct-atct-aaaatgaaggg--tatgga-cattgccataaaagccTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG--------AAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCAGAAACATTAAAAGCACAGAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 5714 806 - 17846 CTATGTTTTTATGTAGTCTGTAATACTTTCCTCTTATAGACCAAACTTCAGGTTTTTTAGGAAATGTTGGAGCTCTGTGCATTATGCCCCACCAGCTTCAGGTTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATGTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTACCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTT----------------AGTGATCCAAAGTGCATGGGTAGTACCGAGAGAC--TG--ATAGATCT-ATCT-AAAATG-AGGG--TATGGA-CATTGCCATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAA-CTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG--------AAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGTCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATAAAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGACAAACATAAAAAGCAGAAACATTAAAAGCAGAAAACTCTTTATTTTCTCTGCTTCCCTGGGAGAA----AAACACC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67592468 821 + 86207423 CTATGTTTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTCTGTGCATTATGCCCCACCAGCTTCAGGTTCCATTGTCAACCTACCCCATACGTATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTGGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTGGATAAACCTC---TGGGTGATCCAAAGTGCATAGGTAGTACCGAGAGAC--TG--ATAGATCT-ATCT-AAAATGAAGGG--TATGGA-CATTGACATAAAAGTCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGACGGACAACATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGTACGTTTTAGAGAAAGTATATTTTCAGTTGATGTG-------GAAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGATACGCTCACC-AAAG-AAATTTTTAAGGTTAAATAAACAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGTGATAAACATAAAAAGGAGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66073618 820 + 204787373 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGGA-CATGGACATAAAAGCCTCACAGTGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTCTGTGCACGTGACTTCCAAAATGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG--------AAAAAAAAAGAGATGCACAAATAGATGTTTGAACGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61005467 820 - 192460366 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGGA-CATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTCTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG--------AAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11117725 821 - 17224310 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGGA-CATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTCTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG-------AAAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17429598 823 - 41321030 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATAAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCAC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGTG--TACGGA-TATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGGAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAACGCACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG-----AAAAAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64501194 821 - 101219884 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATGCATATAAACCATCTGTTTGTCATTTTTTGGCTTTATTCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTTTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTATCGAAAACC--TG--ATAGATCT-ATCT-AAAATGAAGGG--TACGGA-CATCGACATAAAAGCCTCACAATGCATGAAATAGATAATAGATGTGAGATTCCCTGAGGAGCTGTGTGCACGTGACTTCCAGAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG-------AAAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTGTAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGGAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887038 826 - 924385 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG-TTTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCGAAAGAC--TG--ATAGATCT-ATCT-GAAATGAAGGG--TACGGA-CATGGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGAAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAGTAATATA-TTCCTATTGCAAATGCACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG--AAAAAAAAAAAAAAAGAGATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTACC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTACCAGGGTGTTTGCTAAAAGCAGAGCACTGCGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728016 822 - 10587913 CTATGTCTTTATGTAGTCTGTAATGCTTTCCTCTTATAGTCCAAACTTCAGG--TTTTAGGAAAAGTTGGAGCTTTGTGCATTATACCCCACCAGCTTCAGATTCCATTGTCAACCTACCCCATACATATAAACCATCTGTTTGTCATTTTTTGGCTTTATCCGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTATGGCACTTTCTCTCTTATCTATTTTACAAC-ATTTTTACATATGTC--AAAAATTCAATTAC-TAGTCACATATTATTATGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGTTCCAAAGTGCATGGGTAGTACCAAGAGAC--TG--ATAGATCT-ATCT-AAAATGAAGGG--TACGGA-CATCGACATAAAAGCCTCACAATGCATGAAATGGATAATAGATGTGAGATTCCCTGAGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTTATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCACCATCAATAATATA-TTCCTATTGCAAATGTACATTTTAGAGAAAGTATATTTTCAGTTGAAGTG-----AAAAAAAAAAGAGAAATGCACAAATAGATGTTTGAATGGCATTTGTATAATTCTGGGGCAAG-TTTTTAGGACAAGCTTAAC-AAAG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTGTATCAGGGTGTTTGCTAAAAGCAGAGCACTGAGATAAACATAAAAAGCTGAAACATTAAAAGCAGAAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46062991 820 - 98464013 CTGTGTTTTCATGCAGTCTGTAATGCTTTCCTCTTATAGATTAAACTTCAGT-TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTAGCTTCAGGTTCCATTGTCAACCTACCCTATACGTAAGAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGTTATCTATTTAAGGCACTTTCTGTCTTATTTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTGC-TAGTCACATATTAGTGTGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATGGGTAGTACCATTAGAC--TG--AGAGATCT-ATCT-AAAGTGAAGGG--TATGGA-CATTGACATAAAAGTCTCACAAAACATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACATGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGGAAGTATATTTTCAGTTGAAGTG--------AAAAAAAGAGAGAAGCACAAATAGGTGTTTGAATGGCATTTGTATAATTCCAGGGCAAG-TTTTTAGGACAAGCTTACC-AAGG-AAATTTTTAAGGTTAAATATAAAGCAATCTTCTAGTATATCAGGATGTCTGCTAAAAGCAGAGCACTATGATAAGCATAGAAAGCAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCTTGGGAGAA----AAACACC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27734630 820 + 27742158 CTGTGTTTTCATGTAGTCTGTAATGCTTTCCTCTTATAGTTCAAACTTCAGT-TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTAGCTTCAGGTTCCATTGTCAACCTACCCCATACGTATGAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGTCCATCTGTTCCCTTCTTTTAGATATCTATTTAAGGCACTTTCTCTCTTATTTATCTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TGGTCACATATTAGTGTGT---------CATCTACTCAGAAGGAGTCTTAGATAAACCCC---TGGGTGATCCAAAGTGCATAGGTAGTACCAAGAGAC--TC--AGAGATCT-ATCT-AAAGTGAAGGG--TATGGA-CATTGACATGAAAGTTTCAGAAAACATGAAATGGATAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCAGTAATATA-TTCCTATTGCAAATGTACATTTTAGAGGAAGTATATTTTCAGTTGAAGTG--------AAAAAAAGAGAGAAGCACAAATAGATGTTTGAATGGCATTTGTATAATTCCAGGGCAAG-TTTTTAGGGCGAGGTTACC-AAGG-AAATTTTTAAGGTTAAATATAAAGCAAACTTTTAGTATATCAGGATGTTTGCTAAAAGCAGAGCACTATAATAAACATAAAAAGCAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i saiBol1.JH378125 C 0 I 4614 s cebCap1.NW_016107467v1 272032 820 - 4835464 CTGTGTTTTCATGTAGTCTGTAATGCTTTCCTCTTATAGTTCGAACTTCAGT-TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTAGCTTCAGGTTCCATTGTCAACCTACCCCATACGTACAAACCATCTGTTTGTCATTTTTTGGCTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATGTATTTAAGGCACTTTCTCTCTTATTTATTTTATGAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTAGTGTGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATCCAAAGTGCATAGGTAATACCAAGAGAC--TG--AGAGATCT-ATCT-AAAGTGAAGGG--TATGGA-CATTGACATAAAAGTTTCACAAAACATGAAATGGGTAATAGATGTGAGATTCCCTGGGGAGCTGTGTGCACGTGACTTTCAAAAAGCTGTCATTTCACTATGTGGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCCCTAATATA-TTCCTATTGCAAATGTACATTTTAGAGGAAGTATATTTTCAGTTGAAGTG--------AAGAAAAGAGAGAAGCACAAATAGATGTTTGAATGGCATTTGTATAATTCCAGGGCAAG-TTTTTAGGACAAGGTTACC-AAGG-AAATTTTTAAGGTTAAATATGAAGCAAACTTTTAGTATATCAGGATGTTTGCTAAAAGCAGAGCACTATGATAAACATAAAAAGCAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738016 820 + 4093027 CTGTGTTTTCATGTAGTCTGTAATGCTTTCCTCTTATACTTCAAACTTCAGT-TTTTTAGGAAAAGCTGGAGCTCTGTGCATTATGCCCCCCTAGCTTCAGGTTCCATTGTCAACCTACCCCATACGTATGAACCATCTGTTTGACATTTTTTGGGTTTATCCAAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAGATATCTATTTAAGGCACTTTCTCTCTTATTTATTTTACAAC-ATTTTTGCATATGTC--AAAAATTCAATTAC-TAGTCACATATTACTGTGT---------CATCTACTCAGGAGGAGTCTTAGATAAACCGC---TGGGTGATGCAAAGTGCATGGGTAGTACCAAGAGAC--TG--AGAGATCT-ATCT-AAAGTGAAGGG--TATGGA-CATTGACATGAAAGTCTCACAAAACCTGAAATGGATAATAGATGTGAGATTCCCCGGGGAGCTATGTGCACGTGACTTCCAAAAAGCTGTCATTTCACTATGTAGAAGGACAATATGAATTTACATGGAAATTTATTTCCATCATCGGTAATATA-TTCCTATTGCAAAAGTACATTTTAGAGGAAGTATATTTTCAGTTGAAGTG--------AAAAAAAGAGAGAAGCACAAATAGATGTTTGAATCGCATTTTTATAATTCCAGGGCAAG-TTTTTAAGACAAGCTTACC-AAGG-AAACTTTTAAGGTTAAATATGAAGCAAACTTTTAGTATATCAGGATGTTTGCTAAAAGCAGAGCACTATGATAAGCATAAAAAGAAGAAACATTAAAAGCAGCAAACTCTTTATTGTCTCTGCTTCCCTGGGAGAA----AAACACC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11074494 826 + 30473821 GTGTGCTTTCGTGCAGTCCATAATGCTCAGCTCTTACAGTCC-AACTTTAGG-TTTAGGGGAAGATTTGGAGTTCTGTTCATCCCGCTCTATGAGCTTCAGGTTCCATTGTGAACCTACCCCATACGTATAAACCATCTGTTTGTTATTTTTTGGCTTTATCTGAACATCTTCACAAAGCAGCCATCTGTTCCCTTCTTTTAAATATCTATTTATGGTACGTTTTCGCTTATCTCTCTTACGAC-ATTTTTGCATATGTCAAAAAAAATTAATTAC-TAGTCACA---TAGTATGT---------CATCTACTTGAGAGGAGTCTTAGACAAACCCCCTTTGGGTGATCCAAAGTGCATGGGTAGTATCAGGAGCCTATA--AAAATTCC-ACCT-AAAATCAGGGG--TAGGGACCATTAAAACACAAGACTCAGACTGCATGAAATCTGTAATAGATGTGAGATTCCTTGGAGAGCCTTGTACACAAGATTTCCAAAAAGCTGTCATGTCAGTATGTGGAAGAACAATATGAATTTACACTGAAATTTATT----CTATCAGCAGAGCA-CTCCCATTGCAAATGTGCACTTCAGAGGAAGTAGACTTTTAGTTGAAGTG-----AAAAAAAAGACAGAAAAGCACAATCAGATGTTTTAATAACATTTATACAGTCCTGGGGCAAA--TTTTAGGACAAGCTTATC-AAAG-AAATTCTTGAATTTAAATATGAAGCAAACTTTTAATGTACTGGGGTGTTTGCTAAAAGCAGAACATTATGACCAATATAAAAAGCAAAAACATTAAAAGCGGTGAACTCTTTATTGTGTCTGCTTCCCTGGGAAAATAAGAAACACC i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45782842 813 - 149736546 CTGTATTTACACTTACTCTGAAATGCTTTCCGTTTCTGGTCCAAATTCCAAGATTTTTATGAAAAGCTGGAACCCTGTCCACTCAGTCCCTCCAGCTTTGGTTGCCTTCATCAACATATCACATATGTATAAACCATCTGTT----ATCTTTTGGCTTTATCTGAACATCTTCTCAAAGAGGCCATCTGGACCCTTTCTTTAAATATCTATTAAT-GTGCTTCTTCTCTTATCTATTTTACAAC-TTTTTTGCATATGTC--AAAAATTCAATTACATAGCCACATATTAGTATGT---------CATGGACTCAGGAGGAGACTAAGACAAACTCC---TGGGAG-CCCAAAGTTCATGCATAGTACTGAGAGAC--TA--A-AAACCC-ATCT-ATAATGGGGGT--GGGGCA-TATGAACATAAAAGCTTTACAATGCATGAAATTGATAATAGATGTGAGATTCCCTGGAGAGACTTATGCACATGATTTCCAAAAGGCTGTCATTTAACTGTGGAGA---ACAATATGAATTTACATTGAAATTTATTTCCACTATCAAGGCTGTGTTTCTTTTTGCAAATGTGCACTTTGAAGGAAACCTACTTTTAGTAGAAGTA-----GTGCAAAAGAAAGAAA-GCACAAATAGATGTTTTAATGGAACTTGTACAATTCTGGAACAAC-TTTTTAGGACAGGCTTATC-AAAG-AAATTTCTGAGGTTAAATAGGAAGCAGACTTTTAATGTTTGAGGGTGTTTGCTGAAAGCAGAATGCTGTGATGAACTTGAAAAGGAGAAACATTAAAAGCAGTGAGCGCTTTAT--TTTCTGTTTCCCCAAGAGCA----AAGCTCC i mm10.chr6 C 0 C 0 s canFam3.chr20 16608897 833 + 58134056 CTGTGTTTTCATGTGGTCTATAACGCTTTCATCTGACAATCCAAACTCCAGT-TTTTTAGGAAATGTTGGAGCTCTGTCCATTCCGCCCCACGAGCTTCAGGTTCCCTCATCAACCTACCCCATACATATAAACCATCTGTTTGTGATTTTTCGGCTTTATCTGAACATCTTCACAAAGAGGCCATCTGTTCCCTTCTTTTAAATATCTATTTACAGTACTTTCTCTCTTACCGACTTTACAACTATTTTTGCATATGTC--AAAAATTCAATTACACAGTCACATATTAGTATGT---------CATCTTCTCTGGAGAGGTCTTAGACAAATTCC---TGGGCGATCCAAAGAGCAAGGATAATACTAAGAGGC--TA--AAAAATTTCACCT-AAAAGCAAGGGGTGGGGGA-CACAAAAATAAAAGTCTCACAATGCATGAAATCAATAATAGATCAGAGATGTCCTGGAGAGCC-TGTGCACATGATTTCCAAAAAGCTGTTACTTCACTATGTACAAGAACAATATGAATTTGCATTGAAATTTATTTCTGCCATTAGTAATATA-TGCCTATTGCAAATGTGCACTTTAGGGTAAGTATACTTTCAGTTGAAATAGAAAAAAAGAGAGAAAAGAAAAGCACAAATAGATGTTTCAACAGCATTTGTATAATGCTGGGGCAAG-TTTTTAGGACCAGCTTACCGAAGG-AAATTCCTAAGGTTAAATATGAAGCAAACTTTTAATGTGTGGGGGTGTTTGCTAAAAGCAGAACACTATGATGGACGTAAAAAGCTGAAACATTAAAGGCAGTCAGCTCTTTATTTTCTCTGCTTCCCTAGGAGCA----AAACACC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1855506 815 - 2187301 CTCTGTTTTCCTGTACTTTATATTGCTTTCCTCTTATGATCCAAACATCAGT-TTTTTAGGAAGAGTTGGAGCTCTGTCCATTCTGCCCCACCGGCTTCAGGTTACATT-TCAATTTACCCCATGCTTAT-AACCATCTGTTTGTCGTTTTTTGGCTTTATCTGAACATCTTCACATAGATGCCATCTGTTCCCTTCTTTTAAACATCTATTTACAGTACTTACTTTCTTATCTATTTTACAAC-TTTCTTGCATATGTC--AAAAATTCAATTACATAGTCACATATTAGTATGTCATCTATTCCATCTACTCAGGAGGAATCTTAGACTAACCCC---AGGGTAATTCAAAGAGGAT-GATACTACTGAGAGAC--TACCATCCATCC-ACCTGAAAATGAGGGG--AGGTGC-CACTGAAATAAAAGTCTGACGATGCATGAAATCAATAATAGATCTGAGATTCCCTGGATAGCCTTATACACATGATTTCCAAAAAGCTGTCACTTTACTATGTAGA---ACAATACAAATTTACATTGAAATTTATTTTTGCCATCAGTAATATA-TTCCTATTGCAAATATGCACTTTAGAAGAAATACACTTTTAGTAGAAGTG-------GAAGAAAAAAGAAAAGCAGAAATAGATGTTTTACTGGCATGCCTAAATTTCTAGAACAGGGTTTTTAGGACAGACCTACC-AAAGCAAATTCCTGATATTAAATATGATGCAAACTTTAAAAATATAGCTGTGTATGCTTCAAGCAGAACACAATGATT---------------AACATTAAAAGCAGTGTACTCTTTATTTTCCCTACTTTCCTGGGAGCA----AAACACC i dasNov3.JH563077 C 0 C 0 a score=4098537.000000 s hg38.chr14_KI270725v1_random 13969 318 + 172810 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTACAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAATC----------------TGTATATGTCTGGTTACATGTTTATATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TA----TCTATCAATGTATTT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAATAG-----ATGAGCAAATCAATTACATATGAAGGTTA s panTro5.chr3 202008523 318 - 202621043 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAATC----------------TGTATATGTCTGGTTACATATTTATAAGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TA----TCTATCAATGTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAACAG-----ATGAGCAAATCAATTACAAATGAAGGTTA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776542 318 - 205426864 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACGTTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAATC----------------TGTATATGTCTGGTTACATATTTATAAGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TA----TCTATCAATGTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAACAG-----ATGAGCAAATCAATTACAAATGAAGGTTA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6520 319 - 17846 AACAGAAGAATTTGGTAGAT-AAATGATGTTTCCAACTGTGTTGGAAACTTGGAGTTGTGAGATTACAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAATC----------------TGTATATGTCTGGTTACATATTTATATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-ta----tctatcaatgtatct-atacatctg--ttaactttcatctaC--AAA--T--ATGTTTCCAAGTTCTATGGATAATAG-----ATGAGCAAATCAATTACATATGAAGGTTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593289 322 + 86207423 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGCAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAAGAAATTTACTAAAATC----------------TGTATATGTCTGGTTACATATTTATATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-tatctctctatcaatctatct-atacatctG---TAACTTTTATCTAC--AAA--T--ATGTTTCCAAGTTCTATGGATAATAG-----ATGAGCAAATCAATAACAAATGAAGAGTA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074438 322 + 204787373 AACAGAAGAATTCAGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAATC----------------TGTATATGTGTGGTTACATATTTGTATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-tatctctctatcaatctatct-atacatctG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAATAG-----ATGAGCAAATCAATAACAAATGAAGGGTA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006287 322 - 192460366 AACAGAAGAATTCAGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAATC----------------TGTATATGTGTGTTTACATATTTGTATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAATAG-----ATGAGCAAATCAATAACAAATGAAGGGTA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118546 322 - 17224310 AACAGAAGAATTCAGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTATTAAAATC----------------TGTATATGTGTGTTTACATATTTGTATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAATAG-----ATGAGCAAATCAATAACAAATGAAGGATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430421 322 - 41321030 AACAGAAGAATTCAGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAATC----------------TGTATATGTGTGGTTACATATTTGTATGTTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAATAG-----ATGAGCAAATCAATAACAAATGAAGGGTA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502015 322 - 101219884 AACAGAAGAATTCAGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAATC----------------TGTATATGTGTGGTTACATATTTATATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAT--AAA--T--ATATTTCCAAGTTCTATAGATAATAG-----ATGAGCAAAGCAATAACAAATGAAGGGTA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 887864 322 - 924385 AACAGAAGAATTCAGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAA-----TTGGGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTAAAAATAAAAAGTCAAAATAAATTTACTAAAATC----------------TGTATATGTGTGGTTACATATTTGTATGGTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-tatctctctatcagtctatct-atacatctg---taacttttatctat--aaa--t--atatTTCCAAGTTCTATAGATAATAG-----ATGAGCAAAGCAATAACAAATGAAGGGTA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6728838 322 - 10587913 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAAATTATAA-----TTGAGACCACAGATTCAGACACCATCATCACCAACTATTTTTGTTCACATTTGAAAATAAAAAGTCAAAATAAATTTACTAAAATC----------------TGTATATGTGTGGTTACATATTTATATGTTTAAAATT--TAA----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTTTATCTAC--AAA--T--ATATTTCCAAGTTCTATAGATAATGC-----ATGAGCAAATCAATAACAAATGAAGGGTA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46063811 317 - 98464013 AACAAAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAT-----TTGGGTAAACAGATTCAGACACCATCATCACCAACTCTATTTGTTCATATTAGAAAATAAAAAGTCAAAAGAAGTTTACTAAAATC----------------AGTATATCTGTGGTTACATATTTGTATGATTAAATTT--TTG----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-TA----TCTATCAATCTATCT-ATACATCTG---TAACTTT-ATCTAC--AAA--T--ATATTTCCAAGCTCTATGGATAATAG-----GTGAGCAAATCAATAACAAATGAAGGGTA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740064 321 + 27742158 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGTAGTTGTGAGATTATAT-----TTGGGTACACACATTCAGACACCATCATCACCAACTCTTTTTGTTCATATTAGAAAATAAAAAGTTAAAAGAAATTTACTAAAATT----------------AGTATATGTATGGTTACATATTTATATGATTAGAATT--TTG----TATGTATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTGTCT-ATACATCTG---TAACTTT-ATCTAC--AAA--T--ATATTTCTAAGTTCTATGGATAACAG-----GTGACCAAATCAATAACAAATGAAGGGTA i saiBol1.JH378125 I 4614 C 0 s cebCap1.NW_016107467v1 272852 317 - 4835464 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAT-----ATGGGTACACAGATTCAGACACCATCATCACCAACTCTTTTTGTTCATATTAGAAAATAAAAAGTTAAAAGAAATTTACTAAAATC----------------GGTATATGTATGGTTACATATTTATATGATTAAAATT--TTG----TATATATACTT-------TT-----------------ATAT-----AACTGCAT-ta----tctctctatctatct-atacatctg---taacttt-atctaC--AAA--T--TTATTTCCAAGTTCTATGGATAACAG-----GTGACCAAATCAATAACAAATGAAGGGTA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3738836 325 + 4093027 AACAGAAGAATTCGGTAGAT-AAATGATGTTTCCAACTGTGTTGGGAACTTGGAGTTGTGAGATTATAT-----TTGGGTACACAGATTCAGACGCCATCATCACCAAGTCTTTTTGTTCATATTAGAAAATAAAAAGTCAAAAGAAATTTACTAAAATC----------------AGTATATGTGTGGTTACATATTTATATGATTAAAATT--TTGTATATATATATACTT-------TT-----------------ATAT-----AACTGCAT-TATCTCTCTATCAATCTATCT-ATACATCTG---TAACTTT-ATCTAC--AAA--T--ATATTTCCAAGTTCTATGGATAATAG-----GTGACCAAATCAATAGAAAATGAAGGGTA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075320 303 + 30473821 AACAGAAGAATTCTGTAGAT-GAACGATGTTTCCAACTGTGCTGGGAGCTGAGAGTTGTGAGACTATAA-----TTGGGACAACAGATTCAGACACCATCACCACCGGCTCTTTGTGTTCACATTTAAAAATGAAAAGTCAAAAGGAATTTACTGAAATT----------------TTCATATGTGTAGttatatatttatatgattaaaatttctta----tatataCACAT-------TT-----------------TCAT-----GATGGCAT-TG------------CCTACCT-ATAAATCTG---CAACTATTATGGAC--AAACTT--CTATTTCTAAATGATATTGATAACAG-----ATGA-----------ACAAATGAGGAGTA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45783655 334 - 149736546 -AAGAGAGAGTTCTGGAGATAAAATGATACTTCCAGCTGTGCTTGGAGTTCAGAGTGGCGAGATTATAA-----TTGGGACAACAGGTTCAAACACTGTCATCACCAACTCTTTTTGTTCACATTAAAAAGTAAAAA--CAACAACAAACTATTAAATTcac-------------atatgtatatatgtatatatatgcatatatacatatgt--gaa----tatatatatgt-------aTGATTAAAAAGGTCACAGATATTTATGAACTGCAT-TA------------AGTATTT-GGAAATTTG---CAACTTTTTTCTAG--AAA--TTGCTGTTTTGAAGTTACACCAATGATAG-----GCGATCAAGTCATAAACAGG-GAAGTATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16609730 323 + 58134056 AGCAGAAGAATTCTGCAGAT-AAATGGTATTTCCAACTATGTTGGGAGCTCAAAGTTGTGAGATTATAA-----TTGGGACAACAGATTCAGATACCATCA-CACCAGCTCTTTTCACTCACATTTAAAAATAAAAGTTTAAAAAGAATTTACTAAAAGT----------------CCCGTGTGTGTATATAATCATATATATGATTAAAGTT--TCA----TATATGTATATATA--TACT-----------------ATAT-----AACTGCAT-AA--------TCAA--TATCT-ATAAATGTG---TAACTTTTACCTACATAGA--T--CTATTTCCAAATTGCATGTATCATAGAAGAAATGAACAAATCAAGAAAAAATGCAATATA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1856321 355 - 2187301 AAAGAAAGAGCTCTGTAGAT-GAATGGTGTTTCCAACTGTGTTGGGAGTTTAGAATTATGAGATTAAAAATGAGTTGGGACAACAGATTCAGATACCACCATCACCAGCTCCTTTATTTCACATTTAAAACTAAAATGTCAAAAGAAATTTACTCAAATCCCCATATGTATTTGTACGTGTATGTGTGTGTACAAGTTCATATGATTGAAGTT--TTC----CATGTCTACATACATCTCTT-----------------ATAT-----GACTGTATATA-------ATCAATCTATCTAATATGTGTGGCTTAACTTTCACCTAT--AAACTT--CTATTTTCAAGCTGTGTTTACAATAGGAGGAATGAACAAATCAAGAGCAAATGAGGGACA i dasNov3.JH563077 C 0 I 2170 a score=676025.000000 s hg38.chr14_KI270725v1_random 14287 89 + 172810 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTTT---GGTATA-ATAAA------atagaca-----gac--------------------agatagatagataga s panTro5.chr3 202008841 76 - 202621043 TCTAATAAACATTAT-AAATTTATTTAGACATCAACACTT--------GCAGGAAGATTTT---GGTATA-ATA-------------------------------------------agatagatagataga i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776860 85 - 205426864 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTTT---GGTATA-ATAAA------atagat-----------------------------agatagatagataga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6839 89 - 17846 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTTT---GGTATA-ATAAA------atagaca-----gac--------------------agatagatagataga i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593611 84 + 86207423 TCTAATAAACATAATCAAATTTATTTAGACATCAACACTT--------GCAGGAAGATTTT---GGTATA-ATAAA------atagat------------------------------gatagatagataga i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074760 107 + 204787373 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TTT---GATATA-ATAAA------ATAGATA--TTAGAC----AGACagatagatagatagatagatagataga i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006609 107 - 192460366 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TTT---GATATA-ATAAA------ATAGATA--TTAGAC----AGGCagatagatagatagatagatagataga i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118868 91 - 17224310 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TTT---GATATA-ATAAA------ATAGATA--Ttagac--------------------agatagatagataga i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430743 111 - 41321030 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TTT---GATATA-ATAAA------ATAGATA--TTAGACAGACAGACagatagatagatagatagatagataga i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502337 80 - 101219884 TCTAATACACATTATCAAATTTATTTAGACATCAACACTT--------TCAGGAATA-TTT---GATATT-ATAAA------ATAGATA--ATAAAa-------------------------------taga i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888186 75 - 924385 TCTAATAAACATTATCAAATTTATTTAGACATCAACACTT--------GCAGGAATA-TTT---GATata-ataaa------atagata--ataaa------------------------------------ i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729160 113 - 10587913 TCTAATAAACATTATCAAATTTGTTTAGACATCAACACTT--------GCAGGAATA-TTT---GATATA-ATAAA------atagataagatagatagatagatagatagatagatagatagatagataga i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064128 89 - 98464013 TCTAATAAAAATTATTAAATTCATTTAGACATCAGCATTT--------GCAAGAAGATTTT---GGTATA-ATAAT------atagatg--ata-----------------------ggatagctagctaga i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740385 84 + 27742158 TCTAAGAAACATTATTAAATTTATTTAGACATCAACATTT--------GCAGGAAGATTTT---GGTATA-ATAAT------ATACATA--ATA-----------------------Ggatagatag----- i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273169 89 - 4835464 TCTAATAAACATTATTGAATTTATTTAGGCATCAACATTT--------GCAAGAAGATTTT---GGTATA-ATAAT------atagatg--ata-----------------------ggatagacagataga i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739161 86 + 4093027 TCTAATAAACATTATTAAATTTATTTAGACATCAACATTT--------GCAAGAAGATTTT---GGT----ATAAT------atagatg--ata-----------------------ggatagagagataga i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075623 65 + 30473821 GCTAACAAATATTATTAAATCTACTTGGATACCAATACTT--------GCAAGA----TTTGGGGGTCTA-GTAAA------AT------------------------------------------------ i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45783989 71 - 149736546 GATCACAAATCCTCTTAAATGCAGTGAGACAGCAGTGCTT--------ATATGAGGGTACT---GCTTTA-GCAAA------ACCAATA------------------------------------------- i mm10.chr6 C 0 C 0 s canFam3.chr20 16610053 121 + 58134056 TCTAACAAACATAATTAATTTTATTTAGATATCAACACTTCttttttcttaagattttatt---tatttatttgac------agagata--gagcacaagtaggcaaagcagctgtcagagagagagggaga i canFam3.chr20 C 0 I 144 s dasNov3.JH563077 1858846 76 - 2187301 TCTAATAAACATTACTAAATTTATTTAGACATCAACACTT--------CCAAAAAGATTTT---GGTATA-AGAAATTGCAGAGGGAT-------------------------------------------- i dasNov3.JH563077 I 2170 C 0 a score=204023.000000 s hg38.chr14_KI270725v1_random 14376 33 + 172810 tagatagatagatagatagat-----------------------agatagatagat s panTro5.chr3 202008917 33 - 202621043 tagatagatagatagatagat-----------------------agatagatagat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776945 33 - 205426864 tagatagatagatagatagat-----------------------agatagatagat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6928 33 - 17846 tagatagatagatagatagat-----------------------agatagatagat i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593695 33 + 86207423 tagatagatagatagatagat-----------------------agatagatagat i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074867 33 + 204787373 tagatagatagatagatagat-----------------------agatagaAAGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006716 33 - 192460366 tagatagatagatagatagat-----------------------agatagatagaA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118959 33 - 17224310 tagatagatagatagatagat-----------------------agatagaAAGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430854 33 - 41321030 tagatagatagatagatagat-----------------------agatagatagat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502417 33 - 101219884 tagatagatagatagatagat-----------------------agatagatagat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888261 30 - 924385 ---atagatagatagatagat-----------------------agatagatagat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729273 33 - 10587913 tagatagatagatagatagat-----------------------agatagatagat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064217 17 - 98464013 tagat---------------------------------------caatcgatagat i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740469 10 + 27742158 ----------------------------------------------atagatagat i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273258 56 - 4835464 tagatagatagatagatagatagatagatagatagatagatagatgatagatagaa i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739247 20 + 4093027 tagat------------------------------------gatagatagatagat i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075688 12 + 30473821 --------------------------------------------TAATAGACAGAT i otoGar3.GL873534 C 0 C 0 e mm10.chr6 45784060 0 - 149736546 C e dasNov3.JH563077 1858922 0 - 2187301 C e canFam3.chr20 16610174 144 + 58134056 I a score=1234106.000000 s hg38.chr14_KI270725v1_random 14409 140 + 172810 agataaggtagatagg----ctagatagTTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAGAAATAAAGCAAATATGT-TAAACATAACTGTAGCTTTGAGAAAGCATAAAGCAAGCCTGAATAAAAACTT s panTro5.chr3 202008950 137 - 202621043 a---AAGGTAGATAGG----CTAGATAGTTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAGAAATAAAGCAAATATGT-TAAACATAACCGTAGTTTTGAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204776978 137 - 205426864 a---AAGGTAGATAGG----CTAGATAGTTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAGAAATAAAGCAAATATGT-TAAACATAACCGTAGTTTTGAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 6961 140 - 17846 agataaggtagataag----ctagatagTTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAGAAATAAAGCAAATATGT-TAAACATAACCGTAGCTTTGAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593728 87 + 86207423 ----tagatagatagG----CTGCATAGTTC-------------------------------------------------------------------AAGCAAATATGT-TAAACATAACCGTAGCTTTGAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66074900 140 + 204787373 AACTTAGGTAAATAGG----CTAGATAGCTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAATGGCATTGGAATAGAAATAAAGCAGATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61006749 139 - 192460366 AACTTA-GTAAATAGG----CTAGATAGCTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAATGGCATTGGAATAGAAATAAAGCAGATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11118992 139 - 17224310 AACTTA-GTAAATAGG----CTAGATAGCTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAATGGCATTGGAATAGAAATAAAGCAGATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17430887 140 - 41321030 aACTTAGGTAAATACG----CTAGATAGCTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAGAAATAAACCAAATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTAAATAAAAATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502450 140 - 101219884 agCTTAGGTAAATAGG----CTAGATAGCTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAGAAATAAAGCAAATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888291 140 - 924385 agCTTAGGTAAATAGG----CTAGATAGCTC-------AACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGGAATAAAAATAAAGCAAATATGT-TAAACATAACCATAGCTTTCAGAAAGCATAAAGCAAGCCTGAATAAAAACTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729306 140 - 10587913 agCTTAGGTAAATAGG----CTAGATAGCTC-------AACACAAAAT---GTTaa--------cataaaatataacaaaggcattggaatagaaataaagcaaatacgt-taaacataaccataGCTTTCAGAAAGCATAAAGCAAGTCTGAATAAAAACTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064234 123 - 98464013 agcttaggaagatagg----ctaggtaggta-------gacaCAAAAA---GTTAC--------CATAAAACATGACAAAGGCATTGCAATCGAACAAAGGCAATTATGT-TAAACATAACAGTAGCTTTGAGAAAGCCTAAAGTA----------------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740479 144 + 27742158 agcttaggaagatagatagCCTAGATAGGTC-------GACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGCAATCAAAAGAAGGCAAATATGT-TAAACATAACAGTAACTTTGAGAAAGCCTAAAGTAAGCCTGAATCAAAACTT i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 273314 144 - 4835464 agcttacgaagatagataggctagataggta-------gaCACAAAAT---GTTAA--------TATAAAATATGACAAAGGCATTGCAATTGAAAGAAGGCAAATATGT-TAAACATAACAGTAACTTTGAGAAAGCCTAAAGCAAGCCTGAATCAAAACTT i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3739267 144 + 4093027 agCTTAGGAAGATAGATAGGCTAGATAGGTC-------GACACAAAAT---GTTAA--------CATAAAATATGACAAAGGCATTGCAATCGAAAGAAGGCAAATATGT-TAAACATAACAGTAACTTTGAGAAAGCCTAAAGCAAGCCTGAAACAAAACTT i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11075700 108 + 30473821 A-------------------C-----------------------AAAA---AATAC--------CACAAACTATGAAAAAGATGTTGCAATGAAAAGAAGGCAATT-TGT-TCAACATAACTTAAGCTGTCAGAAAGCATTAAACAAGCCTGAGTCAAAATCA i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45784060 110 - 149736546 -GTTTGGGTAGATTTG----TCAG-----------------------T---GGTAA--------TGTAC-------------TATTGCCGTA-AAACAAGGCAAACATTTCTAAGAATAGCAGAGGCAGTGAGAAGACATAAATAAAGGCTGCAACCAAACTC i mm10.chr6 C 0 C 0 s canFam3.chr20 16610318 149 + 58134056 ---------TGATAAA----ATTGATAGGGAGAAAGAGAACACAAAATCGAGATAAAAAAAACCCACAAAATATGAAAAAGTTGTCGCAATTTTAAAAAGGCAACTATGC-TAAGTATAACAGTAGCTGTGAGCCAGTATAAAGCAAGCCAAGACTGAAACTT i canFam3.chr20 I 144 I 1 s dasNov3.JH563077 1858922 105 - 2187301 -----------------------------------------ATTAAAA---ATTAA--------GACAAACTAGGTAAAAACCATGGCAAT---AAGGAGGTAAATATGC-CAACTACAACAGTAGC--TGAGTGAGTTTAAAGCAATCCCGAAACAAAGCTT i dasNov3.JH563077 C 0 I 1 a score=16511.000000 s hg38.chr14_KI270725v1_random 14549 1 + 172810 C s panTro5.chr3 202009087 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777115 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7101 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593815 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075040 1 + 204787373 C i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61006888 1 - 192460366 C i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11119131 1 - 17224310 C i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17431027 1 - 41321030 C i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64502590 1 - 101219884 C i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 888431 1 - 924385 C i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6729446 1 - 10587913 C i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1388495 1 - 1467263 C i rhiRox1.KN296641v1 N 0 I 140 s saiBol1.JH378125 27740624 1 + 27742158 C i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 273459 1 - 4835464 C i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3739412 1 + 4093027 C i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11075809 1 + 30473821 C i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45784170 1 - 149736546 T i mm10.chr6 C 0 I 1 s canFam3.chr20 16610468 1 + 58134056 C i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1859028 1 - 2187301 C i dasNov3.JH563077 I 1 C 0 e calJac3.chr15 46064357 0 - 98464013 C a score=1443550.000000 s hg38.chr14_KI270725v1_random 14550 135 + 172810 TACTATTCCAGATGAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACACAGA--TGTACACAG-AAAAGCAATATTA---- s panTro5.chr3 202009088 135 - 202621043 TACTATCCCAGATGAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACACAGA--TGTACACAG-AAAAGCAATATTA---- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777116 135 - 205426864 TACTATCCCAGATGAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACACAGA--TGTACACAG-AAAAGCAATATTA---- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7102 135 - 17846 TACTATTCCAGATGAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACACAGA--CGTACACAG-AAAAGCAATATTA---- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593816 135 + 86207423 TACTATCCCAGAT--AAAGATAATT---TTACGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCATTCATG----TCTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i nomLeu3.chr21 C 0 I 3 s rheMac8.chr2 66075042 137 + 204787373 TACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTG-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i rheMac8.chr2 I 1 I 3 s macFas5.chr2 61006890 137 - 192460366 TACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTG-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i macFas5.chr2 I 1 I 3 s macNem1.NW_012018021v1 11119133 137 - 17224310 TACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTG-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i macNem1.NW_012018021v1 I 1 I 3 s cerAty1.NW_012009469v1 17431029 137 - 41321030 TACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i cerAty1.NW_012009469v1 I 1 I 3 s chlSab2.chr22 64502592 136 - 101219884 -ACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCACG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i chlSab2.chr22 I 1 I 3 s manLeu1.NW_012098965v1 888433 137 - 924385 TACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTACTTG-GAAAGGACTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATATTA---- i manLeu1.NW_012098965v1 I 1 I 3 s colAng1.NW_012114711v1 6729448 137 - 10587913 TACTATCCCAGATAAAGAGATAATT---TTATGAAACATAAAAGG--ATA--TGTCTA-TTGCTTG-GAAAGGATTGTAGTTTTTCTTAGCGTTCATG----TGTAAGTGAAAT-TTCTTACACAGAGTTGTACACAG-ATAAGCAATGTTA---- i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46064357 121 - 98464013 -----------------GGATAATT---TTATAAAACATCAAATG--ATA--TGTCTGTTTTTTGG-GGAAGTATTGTagtttttcttagcactcatg----tctaagtgaaat-ttcttacacagagttgtacacaA-ATAAGCAATATTA---- i calJac3.chr15 C 0 I 3 s saiBol1.JH378125 27740625 141 + 27742158 AACTATCCCAGACAAACAGATAATT---TTATAAAACATCAAATG--ATA--TGCCTG-GTTTTGG-GAAAGGATTTTAGTTTTTCTTAGCAGTCATGTCTATCTAAGCGAAAT-TTCTTACGCAGAGTTGTACACAA-ATAAGCAATATTA---- i saiBol1.JH378125 C 0 I 3 s cebCap1.NW_016107467v1 273460 141 - 4835464 TACTATCCCAGACAAACAGATAATT---TTATAAAACATCGAATG--ATA--TGCCTG-TTTTTGG-GGAAGGATTTAAGTTTTTCTTAGCACTCATGTCTATCTAAGTGAAAT-TTCTTACACAGAGTTGTACACAA-ATAAGCAATATTA---- i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3739413 135 + 4093027 TACTATCCCACACAAACAGATAATT---TTATAAAACATCAAATG--ATA--TGCCTG-TTTTTTA-GGAAGGATTGTAGTTTCTCTTAGCACTCATG----TCTAAGTGAAAT-TTCTTACAC--AATTGTACACAA-ATAAGCAATATTA---- i aotNan1.NW_018502033v1 C 0 I 3 s otoGar3.GL873534 11075810 135 + 30473821 TCGTAGCCTAAGCAACG----AATT---TTATGACACATAAAAGGAAATA--TGTCCG-TTTCCTGAGGAAGGATGGTAGTTTTTCCTACCACTGGTA----TTTAAGTGAATT-TTCTTACATAGAGGTGTATATAG--TAAGCGATATTT---- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784172 129 - 149736546 AAGTAGCTCAGAA--------ACTT---CCATGAATCATTAATTG--ATATTTACCTG-CTTCTTG-TGAAGA--TGATGATCCTTTTATCA-TCTTT----TGTAATTGGAATATTTTTATCCAGAGTTGTTCATGGTAAAAACATTCTT----- i mm10.chr6 I 1 C 0 s canFam3.chr20 16610469 103 + 58134056 TAGCAGCTCA-------------------------------------GCA--C-CCTG-TTTCTTA-GGGTGGAGGGCAGTTGTT-TTAGTATTCATG----TCTGAGGGAAAT-TTCTTACATTGAGTTTTACACAG-ATAAGCAATATTC---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859029 134 - 2187301 TAGTAGTCCAGGCAAAAAGAGAATTTTATTATTAAACATATAAGGAAATA--CGTCAG-CTTCTTG-------------ATTTTTGTTAGCACTCATC----TCTAAGGGAAAT-GTCGTACACTGAGTTGTACACAA-ATGAGCAATAATGTTTT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1388496 140 - 1467263 I a score=35780.000000 s hg38.chr14_KI270725v1_random 14685 2 + 172810 TT s panTro5.chr3 202009223 2 - 202621043 TT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777251 2 - 205426864 TT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7237 2 - 17846 TT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593954 2 + 86207423 TT i nomLeu3.chr21 I 3 C 0 s rheMac8.chr2 66075182 2 + 204787373 TT i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61007030 2 - 192460366 TT i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11119273 2 - 17224310 TT i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17431169 2 - 41321030 TT i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64502731 2 - 101219884 TT i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 888573 2 - 924385 TT i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6729585 2 - 10587913 TT i colAng1.NW_012114711v1 C 0 I 3 s rhiRox1.KN296641v1 1388636 2 - 1467263 TT i rhiRox1.KN296641v1 I 140 I 305 s calJac3.chr15 46064481 2 - 98464013 TT i calJac3.chr15 I 3 C 0 s saiBol1.JH378125 27740769 2 + 27742158 TT i saiBol1.JH378125 I 3 C 0 s cebCap1.NW_016107467v1 273604 2 - 4835464 TT i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3739551 2 + 4093027 TT i aotNan1.NW_018502033v1 I 3 C 0 s otoGar3.GL873534 11075945 2 + 30473821 TT i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45784301 2 - 149736546 CT i mm10.chr6 C 0 C 0 s canFam3.chr20 16610572 2 + 58134056 TT i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1859163 2 - 2187301 TT i dasNov3.JH563077 C 0 C 0 a score=1445238.000000 s hg38.chr14_KI270725v1_random 14687 113 + 172810 TTCTC-CAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GGGAAGTAAGTCAATT s panTro5.chr3 202009225 117 - 202621043 TTCTC-CAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCACAGTGCATTACACTAAGCCAGCC---ATTTTACAAATGGGCTCTCAAATTTTGACACTA--GGGAAGTAAGTCAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777253 113 - 205426864 TTCTC-CAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCACGGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GGGAAGTAAGTCAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7239 113 - 17846 TTCTC-CAATAAGAACACAGACTAGTGACTCTTGATTGATCATCCGCAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATCA--GGGAAGTAAGTCAATT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67593956 113 + 86207423 TTCTC-CAGTAAGAACACGTACTAGTGACTCTTGATTGATCATCCACAGCGCATTACACTA----AGCC---ATTTTACAGATGAGCTCTCAAATTTTGACATTA--GGGAAGTAAGTCAATT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075184 113 + 204787373 TTCTC-CAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GCGAAGTAAGTCAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007032 113 - 192460366 TTCTC-CAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GCGAAGTAAGTCAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119275 113 - 17224310 TTCTC-CAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GCGAAGTAAGTCAATT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431171 113 - 41321030 TTCTC-CAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GTGAAGTAAGTCAATT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502733 113 - 101219884 TTATC-CAATAAGAACATAGACTAGTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GGGAAGTAAGTCAGTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888575 113 - 924385 TTCTC-CAATAAGAACATAGACTAATGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GCGAAGTAAGTCAATT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729590 113 - 10587913 TTCTC-CAATAAGAACATAGACTAGTGACTCTTGATTGAAAGTCCACAGTGCATTACACTA----AGCC---ATTTTACAAATGGGCTCTCAAATTTTGACATTA--GGGAAGTAAGTCAATT i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46064483 113 - 98464013 TTATT-TGATAAGAACATAGACTACTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGTC---ATTTTACAAATGGGCTCTCAAATGTTAATGTTA--GGGAAGTAAGTCAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740771 113 + 27742158 TTATC-TGATAAGAACATAGACTGCTGACCCTTGATTGATCATCCACAGTGCATTATACTA----AGTC---ATGTTACAAATGTGCTCTCAAATGTTAATGTTA--GGGAAGTAAGTCAGTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273606 113 - 4835464 TTATC-CAATAAGAACGTAGACTACTGACCCTTGATTGATCATCCACAGTGCATTACACTA----AGTC---ATGTTACAAATGGGCTCTCAAATGTTAATGTTA--GGGAAGTAAGTCAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739553 113 + 4093027 TTATC-CGATAAGAACATAGACTACTGACTCTTGATTGATCATCCACAGTGCATTACACTA----AGTC---ATTTTACAAATGGGCTCTCAAATGTTAATGTTA--GGAAAGTAAGTCAGTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11075948 109 + 30473821 TTGTCTTTATAAGACCATAGACTAGTGACTCTCAATTGGTCATCCACGGCACAT----CCA----AGTT---GTTTTACGAATGTGCTCTTAAATTCTGGCTTTT--GT-AAGGAAGTCAAtt i otoGar3.GL873534 I 1 I 276 s mm10.chr6 45784303 113 - 149736546 TTAAC-CTATAAGATCACAGACCAATAACTCTTAATTGATCACTTAGAGTATACTACACGG----AGCC---ACTTTACTG-TAAGCCCT-GAATTTTGACCTTCATGGGACGTGTGTAAATA i mm10.chr6 C 0 C 0 s canFam3.chr20 16610577 113 + 58134056 TCCTC-CCAGAAGACCATAGACCAGCAGCTCTTAAATGATCATCAACAGTACATTACACTA----AGTC---ATTTTACAAATGGGCTCCCAAATTTTGACCTTA--GATAAGGTAGCCAATG i canFam3.chr20 I 3 I 81 s dasNov3.JH563077 1859165 114 - 2187301 TCCTC-CTAGAAGCCCATAGACCAATGGCTTTT-ATTGATGATCCACAGTATAGAACATTA----AGACCATATTCTACAAG-GGGTTTCCAAATTTTGACCTCT--GTGAAGGTAGCCAATT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1388638 305 - 1467263 I a score=78735.000000 s hg38.chr14_KI270725v1_random 14800 6 + 172810 TGAGCC s panTro5.chr3 202009342 6 - 202621043 TGAGCC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777366 6 - 205426864 TGAGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7352 6 - 17846 TGAGCC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594069 6 + 86207423 TGAGCC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075297 6 + 204787373 TGAACC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007145 6 - 192460366 TGAACC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119388 6 - 17224310 TGAACC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431284 6 - 41321030 TGAACC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502846 6 - 101219884 TGAACC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888688 6 - 924385 TGAACC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729703 6 - 10587913 TGAACC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064596 6 - 98464013 TGAGCC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740884 6 + 27742158 TGAGCC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273719 6 - 4835464 TGAGCC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739666 6 + 4093027 TGAGTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11076333 6 + 30473821 TGAACT i otoGar3.GL873534 I 276 C 0 s canFam3.chr20 16610771 6 + 58134056 tgagtc i canFam3.chr20 I 81 I 127 s dasNov3.JH563077 1859279 6 - 2187301 TGAATC i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1388638 305 - 1467263 I e mm10.chr6 45784416 0 - 149736546 C a score=1442674.000000 s hg38.chr14_KI270725v1_random 14806 121 + 172810 AAGAATTTCAATAAAGCTA-TGCATG---AACATGAATCTTGATA-TAG-GTTAAG------------ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT s panTro5.chr3 202009348 121 - 202621043 AAGAGTTTCAATAAAGCTA-TGCACG---AACATGAATCTTGATA-TAG-GTTAAG------------ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777372 121 - 205426864 AAGAGTTTCAATAAAGCTA-TGCACG---AACATGAATCTTGATA-TAG-GTTAAG------------ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7358 121 - 17846 AAGAGTTTCAATAAAGCTA-TGCACG---AACATGAATCTTGATA-TAG-GTTAAG------------ATTCTGGATCTAGAGCAGCC-TTTGACCTCCATCTGCCTATAACAGACATAA----TTTTCTTTTCATTCATTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594075 121 + 86207423 AAGAGTTTCAATAAAGTTA-TGCACG---AACATGAATCTTGATA-TAG-ATTAAG------------ATTCTGGATCTAGAGCAGCC-TTTGACCCCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075303 128 + 204787373 AAGAATTTTAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCT-----TAATATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007151 128 - 192460366 AAGAATTTTAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCT-----TAATATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119394 128 - 17224310 AAGAATTTTAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCT-----TAATATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCGTTCATTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431290 128 - 41321030 AAGAATTTTAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCT-----TAATATTCCAGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACGTAA----TTTTCTTTTCATTCATTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502852 128 - 101219884 AAGAATTTCAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAC-ATTAAGTCT-----TAATATTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888694 128 - 924385 AAGAATTTTAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCT-----TAATATTCCGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729709 128 - 10587913 AAGAATTTCAATGAAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCT-----TAATGTTCTGGATCTAGAGAAGCC-TTTGACCTCCATCTGCCTAGAACAGACATAA----TTTTATTTTCATTCATTTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064602 133 - 98464013 AGGAGTTTCAATGCAGTTA-TGCACA---AACATGAATCTTGATA-CAG-ATTAAATCTGAATATAACATTCTGGATCTAGAGCAGCC-TTTGACCTCCGTTTGCCTAGAACAGACATCA----TTTTTTTTTCATTCATTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27740890 133 + 27742158 AGGAGTTTCAATGCAGTTA-TGCACA---AACATGAATCTTGATA-CAG-ATTAAGTCTGAATATAACATTCTGCATCTAGAGCAGCC-TTTGACCTCCATTTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273725 134 - 4835464 AGGAGTTTCAATGCAGTTATTGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCTGAATATAACATTCTGGATCTAAAGCAGCC-TTTGACCTCCATTTGCCTAGAACAGACATAG----TTTTCTTTTCATTCATTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739672 133 + 4093027 AGGAGTTTCAATGCAGTTA-TGCACA---AACATGAATCTTGATA-TAG-ATTAAGTCTGAATATTACATTCTGGATCTAGAGCAGCC-TTTGACCTCCATTTGCCTAGAACAGACATAA----TTTTCTTTTCATTCATTTTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11076339 124 + 30473821 AAGTATTTCAATGCAGACA-TGTATG---AACGCAAAAATT-CTA-TGT-TACAAATCCAAAAAGAATATTCCAGGTCTAGCATAGC-------CCTCCAACTGCCTAGAGCAGATATAA----TTT--GTTCCATTTATCTTT i otoGar3.GL873534 C 0 I 442 s mm10.chr6 45784416 104 - 149736546 -------TCCACTGTGTGA-TGC--------TGCAAATCTGAGCA-CAG-------------------TGCTTGGCTCTAGAGTGGCCATTTCACCTCCATCTGCCGGGAGCAGGTGTCA----TTTTCTCTTCATAAATGTTT i mm10.chr6 C 0 I 5 s canFam3.chr20 16610904 137 + 58134056 AGAAATATCAACACAGATA-TGTGCAAACAACATGTATCTTGCTATTAG-GGTAAATATGAATATAGCATTCTAGGTTTAGAGCAGTC-CTCTATCTCCATCTGCCTAGAGCACTCATAA----TTTTCTTTTCATTCGATTTT i canFam3.chr20 I 127 C 0 s dasNov3.JH563077 1859285 137 - 2187301 AGGAGTCTCAAGGCAGATA-AATA-A---AACATGAATCTTTCTT-TAGTATAAAATCTGAATATAATATTCTGGATCTGCTGCGGCC-CCTTACCCTCATCTGTATAGAGCAGACATAAGCTTTTTTTTTTTTTTCCAGTTTT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1388638 305 - 1467263 I a score=82035.000000 s hg38.chr14_KI270725v1_random 14927 6 + 172810 GGTGAA s panTro5.chr3 202009469 6 - 202621043 GGTGAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777493 6 - 205426864 GGTGAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7479 6 - 17846 GGTGAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594196 6 + 86207423 GGTGAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075431 6 + 204787373 GGTGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007279 6 - 192460366 GGTGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119522 6 - 17224310 GGTGAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431418 6 - 41321030 GGTGAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502980 6 - 101219884 GGTGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888822 6 - 924385 GGTGAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729837 6 - 10587913 GGTGAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064735 6 - 98464013 GGTGAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741023 6 + 27742158 GGTGAA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273859 6 - 4835464 GGTGAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739805 6 + 4093027 GGTGAA i aotNan1.NW_018502033v1 C 0 C 0 s mm10.chr6 45784525 6 - 149736546 TTTAAA i mm10.chr6 I 5 C 0 s canFam3.chr20 16611041 6 + 58134056 GGTGGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859422 6 - 2187301 GGTGAC i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1388638 305 - 1467263 I e otoGar3.GL873534 11076463 442 + 30473821 I a score=363938.000000 s hg38.chr14_KI270725v1_random 14933 28 + 172810 AAATATAGGCTGGTGTGATTATTTCTGT s panTro5.chr3 202009475 28 - 202621043 AAATATAGGCTGGTGTGATTATTTCTGT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777499 28 - 205426864 AAATATAGGCTGGTGTGATTATTTCTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7485 28 - 17846 AAATATAGGCTGGTGTGATTATTTCTGT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594202 28 + 86207423 AAATATAGGCTGGTGTGATTATTTCTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075437 28 + 204787373 AAGTATAGGCTGGTGTGATTACTTCTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007285 28 - 192460366 AAATATAGGCTGGTGTGATTACTTCTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119528 28 - 17224310 AAATATAGGCTGGTGTGATTACTTCTGG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431424 28 - 41321030 AAATATAGGCTGGTGTGATTATTTCTGG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64502986 28 - 101219884 AAATATAAGCTGGTGTGATTATTTCTGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888828 28 - 924385 AAATATAGGCTGGTGTGATTATTTCTGG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729843 28 - 10587913 AAACATAGGCTGGTGTGATTATTTCTGG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064741 28 - 98464013 AAATATAGGATGGTGTGATTATTTCTAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741029 28 + 27742158 AAATATAGGCTGATGTGATTATTTCTGT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273865 28 - 4835464 AAATACATGCCGGTGTGATTATTTCTGT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739811 28 + 4093027 AAATATAGGCTGGTGTGATTATTTCTGT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11076905 28 + 30473821 AAATGCAATCCAATGTAATTATTTTTGT i otoGar3.GL873534 I 442 C 0 s mm10.chr6 45784531 25 - 149736546 AAAAACTCAC---TGTGATTATTTCTGT i mm10.chr6 C 0 C 0 s canFam3.chr20 16611047 28 + 58134056 AAATCCAGCCTGGCGTGATTGTTTCTGT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1859428 28 - 2187301 AAGTGCAGCCCATTGTGGTTATTTCTGT i dasNov3.JH563077 C 0 I 7693 e rhiRox1.KN296641v1 1388638 305 - 1467263 I a score=245002.000000 s hg38.chr14_KI270725v1_random 14961 23 + 172810 GATGTAATTCAATAACTAAAATG s panTro5.chr3 202009503 23 - 202621043 GATGTAATTCAATAACTAAAATG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777527 23 - 205426864 GATGTAATTCAATAACTAAAATG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7513 23 - 17846 GATGTAATTCAATAACTAAAATG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594230 23 + 86207423 GACGTAATTCAATAACTAAAAGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075465 23 + 204787373 GATGTAATTCAATAACTAAAATA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007313 23 - 192460366 GATGTAATTCAATAACTAAAATA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119556 23 - 17224310 GATGTAATTCAATAACTAAAATA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431452 23 - 41321030 GAGGTAATTCAATAACTAAAATA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503014 23 - 101219884 GATGTAATTCAATAACTAAAATA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888856 23 - 924385 GAGGTAATTCAATAACTAAAATA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729871 23 - 10587913 GATGTAATTCAATAACTAAAATA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064769 23 - 98464013 GATGCAATCCAATTATGAAAATT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741057 23 + 27742158 GATGCAATTCAATTATGAAAATT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273893 23 - 4835464 GATGCAATCCAATTATGAAAATG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739839 23 + 4093027 GATGCAATCCAATTATGAAAATT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11076933 23 + 30473821 AATGCAATGCATTTATTAAAAAC i otoGar3.GL873534 C 0 I 12 s mm10.chr6 45784556 23 - 149736546 TGTGTGATCTAAGTATTAAAATG i mm10.chr6 C 0 I 1 s canFam3.chr20 16611075 23 + 58134056 GATGCAATCCAATTACTAAAATT i canFam3.chr20 C 0 C 0 e rhiRox1.KN296641v1 1388638 305 - 1467263 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=12907.000000 s hg38.chr14_KI270725v1_random 14984 1 + 172810 T s panTro5.chr3 202009526 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777550 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7536 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594253 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075488 1 + 204787373 T i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61007336 1 - 192460366 T i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11119579 1 - 17224310 T i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17431475 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64503037 1 - 101219884 T i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 888879 1 - 924385 T i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6729894 1 - 10587913 T i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1388943 1 - 1467263 C i rhiRox1.KN296641v1 I 305 I 757 s calJac3.chr15 46064792 1 - 98464013 T i calJac3.chr15 C 0 I 1 s saiBol1.JH378125 27741080 1 + 27742158 T i saiBol1.JH378125 C 0 I 1 s cebCap1.NW_016107467v1 273916 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3739862 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11076968 1 + 30473821 C i otoGar3.GL873534 I 12 C 0 s mm10.chr6 45784580 1 - 149736546 T i mm10.chr6 I 1 C 0 s canFam3.chr20 16611098 1 + 58134056 T i canFam3.chr20 C 0 I 1 e dasNov3.JH563077 1859456 7693 - 2187301 I a score=451623.000000 s hg38.chr14_KI270725v1_random 14985 33 + 172810 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT s panTro5.chr3 202009527 33 - 202621043 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777551 33 - 205426864 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7537 33 - 17846 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594254 33 + 86207423 ACACTCTGGTCTCAAAGTCCTTAACATCACCTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075490 33 + 204787373 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61007338 33 - 192460366 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11119581 33 - 17224310 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17431477 33 - 41321030 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64503039 33 - 101219884 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 888881 33 - 924385 ACACTCTTGTCTCAAAGTCCTCAACATCACCTT i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6729896 33 - 10587913 ACACTCTTGTCTCAAAGTCCTCAACATCACCTA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46064794 33 - 98464013 ACTCTCTTGTCTCAAAGTCCTCAACATCACCTT i calJac3.chr15 I 1 C 0 s saiBol1.JH378125 27741082 33 + 27742158 ACACTCTTGTCTCAAAGTCCTCAACATCACCTC i saiBol1.JH378125 I 1 C 0 s cebCap1.NW_016107467v1 273918 33 - 4835464 ACACTCTTGTCTCAAAGTCCGCAACATCACCCT i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3739864 33 + 4093027 ACACTTTTGTCTTAAAGTCCTCAACATCACCTT i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11076969 33 + 30473821 TCACCCTTGTCTCAATATCCCTAACATCACCCT i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784581 33 - 149736546 ATATCCTTGTCTCAGAATTCCAAACATCTCATT i mm10.chr6 C 0 I 373 s canFam3.chr20 16611100 33 + 58134056 ACACTTTTGTCTCAAAGTCCCCAATAccactct i canFam3.chr20 I 1 C 0 e rhiRox1.KN296641v1 1388944 757 - 1467263 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=3303256.000000 s hg38.chr14_KI270725v1_random 15018 312 + 172810 GTCCTAAACTCCTGG-TCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG s panTro5.chr3 202009560 312 - 202621043 GTCCTAAACTCCGGG-TCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCATTTTTCTCCTTTCCTTTTGTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777584 312 - 205426864 GTCCTAAACTCCGGG-TCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCATTTTTCTCCTTTCCTTTTGTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7570 312 - 17846 GTCCTAAACTCCGGG-TCCAAGACCAATCTACCCTCCATCCTCTTGTTGCCTGGATCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATATTCCAGGACCATCTGTAAAAGGCAAGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594287 312 + 86207423 GTCCTATACTCCTGG-TCCAAGACCAATCTACCCTCCAACCTCTTGTTGCCTGGGTCCCTTTTCTTTGTGGGTATGACCATTGGAGCACTGAAAAGATGATATAAGTGTCAGGTGAGCCCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCTTTTTTCTCCTTTCCTTTTCTCCATATTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTA-ATAAGA--AGGGGTAGGATTATGGAT------AACTACGACTTTGAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075523 312 + 204787373 GTCCTATGCTCCTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATACGCGTCAGGTGAATTCCATGTTACACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61007371 312 - 192460366 GTCCTATGCTCCTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATACGCGTCAGGTGAATTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11119614 312 - 17224310 GTCCTATGCTCCTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATACGTGTCAGGTGAATTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGAGGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGAGTAGGATTATGGAT------AATTACAACTTTGAG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17431510 312 - 41321030 GTCCTATGCTCCTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATAAGCGTCAGGTGAATTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTCCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATAGAT------AACTACAACTTTGAG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503072 311 - 101219884 GTCCTATGCTCCTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATAAACATCAGGTGAATTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCTG-TTTGGGAATTTCCTCTAGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 888914 318 - 924385 GTCCTATGCTCCTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGACCACTGACAAGATGATATAAGCGTCAGGTGAATTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCCGCTTTGGGAATTTCCTCTGGCACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATACTCCAGGACCATCTGTAAAAGGCAGGGATGAGAGAGAGTTCAATGCCTTCCTCCTCCTCTTG-ATAAGA--AGGGGTAGGATTATGGATAACTACAACTACAACTTTGAG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6729929 309 - 10587913 GTCCTATACTCGTGG-TCCAAGACCAATCTACCCTCTATCCTCTTGTTACCTGGGTCCCTTTTCTTTGTGAGTATGACTGTTGGAACACTGACAAGATGATATAAGGGTCAGGTGAATTCCATGTTATACATTTGATTTATG---------------------------------AGGGAATGCAGGCCGTTTTGGGAATTTCCTCTGGTACCTTAGCCCTTTTTCTCCTTTCCTTTTCTCCATATTCCGGGACCATCTGTAAAAGGCAGGGATGAAAGAGAGTTCAATGCCTTTCTCCTCCTCTTG-AT---A--AGGGGTAGGATTATGGAT------AACTACAACTTTGAG i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46064827 309 - 98464013 GTCCTATAGTCCTGG-TTTCAGAACAATCTACCCTCCACCCTCTTGTCACCTGGGTCCCTTTTCTTTGTGGGTATGACCGTTGGAGCACTGACAAGATGATT---GTGTCAGGTGAGTTCCATGTTATACATTGGATTTGTG---------------------------------AGGGAATACAGGCTGCTTTGGTAATTTCCTCTGGCACCTTAGCTGTTTTTTTCTTTTCCTTTTCTCCGTACTCCAGGACCATCTGTAAAAGGCAAGGATGAGAGAGAATTCAATGCCTTTCTCCTCCTCTTG-ACATGA--AGGGGTGGAATTATGGAG------AACTACAATTTTAAG i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741115 304 + 27742158 GTCCTA--------G-TCTCAGAACAATCTACCCTTCACCCTCTTGTCGCCTGGGGCCCTTTTCTTTGTGGGTTTGACCGTTGGAGCACTGACAAGATGATGTAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTGTG---------------------------------AGGGAATACAAGCTGCTTTGGCAATTTCCTCTGGCACCTTAGCTGTTTTTTTCTTTTCCTTTTCTCCGTACTCCAGGACCACCTGTAAAAGGCAGGGATGAGAGAGAATTCAATGCCTTTCTCCTCCTCTTG-ACATGA--AGGGGTGGAATTACGGAG------AACTACAATTTTGAG i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 273951 304 - 4835464 GTCCTG--------G-TCTCTGAACAATCTACCCTCCACCCTCTTGTCGCCTGGGTCCCATTTCTTTGTGGGTATGACCGTTGGAGCACTGACACGATGATGTAAGTGTCAGGTGAGTTCCATGTTATACATTTGATTTGGG---------------------------------AGGGAATACAGGCTGCTTTGGTAATTTCCTCTGGCACCTTAGCTGTTTTTTTCTTTTCTATTTCTCCGTACTCCAGGACCATCTGTAAAAGGCAGGAAGGAGAGAGAATTCAATGCCTTTCTCCTCCTCTTG-ACATGA--AGGGGTGGAATTATGGAG------AACTACAATTTTGAG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3739897 297 + 4093027 ATCCTG--------G-TCTCAGAACAATCTACCCTCCACCCTCTTGTCGCCTGGGTCCCTTTTCTTTGTGGGTATGACCGTTGGAGCACTGACAAGATGAT----GTGTCAGGTGAGTTCCATGTTATACATTTGATTTGTG---------------------------------AGGGAATACAGGCTGCTTTGGTAATTTTCTCTGGCACCTTAGCTGTTTTTTTCTTTTCCTTTTCTCTGTACTCCAGGACTATCTGTAAAAGGCAGGGATGAGAGAGAATTCAATGCGTTT---CTCCTCTTG-ACATGA--AGGGGTGGAATTACGGAG------AACTACAATTTTGAG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077002 320 + 30473821 GGCC-------------CCCACAGCAATCTACCCTTCACCATCCTGCTGCTCATGTCCCCTTTGTCTGTGGGTGTGTCC-TTGGAGCACTCACAGGACTGTGTAAGGCTAAGGTAGGTTCTGTAGCACATCTTGGACTTGTGAG-AAGTTTTCGTGTCCTTGCCATGGCAACCCAAGAGAATGCA-GCTGCTTTGGAAATTCTCTCTGGTACCTTAGCCCACACCCTC--TTCCCTTTCTGCATACTCTA---------GTAAAAGGCAGGGGGAAAGGATAGTTCAATGCCTTCCCCCACCTTTGACATGGGA--AGGAGTGAGCTTTTGGAT------AACTCCAGTTTCAGG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16611133 323 + 58134056 gtcccaaactcctggcccccaaagcgatctaccttccatactcttgttgctaggctcccctttatcagagtccttgac-----gagtactaagaagatggt-taagtcccagctaacttctgtagaataaggttcactcttgagaaaactctagtgtctttgccatggcaacctgagggaacacaggctgctTTGGG-ATTTCCTCTGACACTTTAGCC---TCTTTCTTACACCTTTTTTCATGTTCTGTAGCCATATGTGAAAGGGAGGGGTAGGAGACAGTTCGAATCCTTTTCTGTCCCCTTA-GCATGGACAGAGGTAAGATTATGGAA--------------------- i canFam3.chr20 C 0 C 0 e rhiRox1.KN296641v1 1388944 757 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e dasNov3.JH563077 1859456 7693 - 2187301 I a score=5114173.000000 s hg38.chr14_KI270725v1_random 15330 414 + 172810 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAGTTGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACTTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCACGGAAGCAAGAAACAGTCCTCAAAGGCACTTTATAACTGATACCATAT-AAAAACAATTTTTGCTACATTTGACATGACATACTCTTACAGTGATGTCT--CTGGCAGAACAATGCAC---------------ACTCAGTGAGTTGAGGAACAAGTTGCTGCAAAGAAGTGATAAGGCTTCATGTAAAGGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGACTGT s panTro5.chr3 202009872 414 - 202621043 AATTCTCCCTCTTCCCTTCTGTAGTCCTCTAGATGTGTTCCAGGGGATTGGGGTGTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACCAtat-aaaaacaatttttgctacatttgacacgacatactcttacagtgatgtct--ctggcagaacaatgcac---------------actcagtgagttgtggaacaacttgctgcaaagaagtgataaggcttcatgtaaaggcacgctagtgttaaagaaagatgccctatatgccagaaattgtaagaaatttgcattatgactgt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204777896 414 - 205426864 AATTCTCCCTCTTCCCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGGGGTGTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACCAtat-aaaaacaatttttgctacatttgacatgccatactcttacagtgatgtct--ctggcagaacaatgcac---------------actcagtgagttgtggaacaacttgctgcaaagaagtgataaggcttcatgtaaaggcacgctagtgttaaagaaagatgccctatatgccagaaattgtaagaaatttgcattatgactgt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 7882 414 - 17846 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTGTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACTTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACCATAT-GAAAACAATTTTTGCTACATTTGACACAACATACTCTTACAGTGATGTCT--CTGGCAGAACAATGCAC---------------ACTCAGTGAGTTGAGGAACAAGTTGCTGCAAAGAAGTGATAAGGCTTCATGTAAAGGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGACTGT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67594599 414 + 86207423 AATTCTCCCTCTTACATTCTATAGTCCTCTAGATGTGGTCCAGGGGATTGGAGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTTTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGAGAAGCAAGAAACAGTCCTCAAAAGCACTTTATAACTGATACTACAT-AAAAACAATTTTTGCTACATTTGACATGACATACTCTTACAGTGATGTCT--CTGGCAGAACACTGCAC---------------ACTCAGTGAGTTGAGGAACAAGTTGCTGCAAAGAAATGATAAGGCTTCATGTAAAGGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAACTTGCATTATGACTGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66075835 413 + 204787373 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGAAGAAACTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAC----------------------TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCAAAAACACTTTATAACtgataacatat-aaaaacaatttttgctacctttgacactacatactcttacagtgatgtct--ctggcagaacattgta----------------actcggtgggttgAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGTCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61007683 413 - 192460366 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGAAGAAACTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAC----------------------TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCAAAAACACTTTATAACTGATAACATAT-AAAAACAATTTTTGCTACCTTTGACACTACATACTCTTACAGTGACGTCT--CTGGCAGAACATTGTA----------------ACTCGGTGGGTTGAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGTCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11119926 413 - 17224310 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGAAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAC----------------------TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCAAAAACACTTTATAACtgataacatat-aaaaacaatttttgctacctttgacactatatactcttacagtgatgtct--ctggcagaacattgta----------------actcggtgggttgAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGTCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17431822 414 - 41321030 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAC----------------------TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCGCGAAAACACTTTATAACtgataacatat-aaaaacaatttttgctacctttgacactacatactcttacagtgatgtct--ctggcagaacattgTAC---------------ACTCGGTGGGTTGAGGAATAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGGCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCGTTATGGCTGT i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64503383 414 - 101219884 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAAGCTAG-AAAC----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGTATTCATAGGGAAGCAAGAAACAGTCTGCAAAAACACTTTATAAATGATAACATAT-AAAAACAATTTTTGCTACCTTTGACACTACATACTCTTACAGTGATGTCT--CTGGCAGAACAATGTAC---------------ACTCAGTGGGTTGAGGAGTAAGTTTCTGCAATGAAGTGATAAGGCTTCATGTAAAGGCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 889232 414 - 924385 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGTGGTGTTTTTGCTGTGCCCTCTCCTAGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAC----------------------TGGAACACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGTAAGAAACAGTCCGCAAAAACACTTTATAACtgataacatat-aaaaacaatttttgctacctttgacactacatactcttacagtggtgtct--ctggcagaacattgTAT---------------ACTCGGTGGGTTGAGGAACAAGTTTCTGCAATGAAGTGATAAGGTTTCATGTAAAGGCATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCGTTATGGCTGT i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6730238 414 - 10587913 AATTCTCCCTCTTACCTTCTGTAGTCCTCTAGATGTGGTCCAGGGGATTGAGGTTTTCAGAAGAGGTGTTTTTGCTGTGCCCTCTCCTCGAAGGCCCTGCAGAAGCTGACT------AA------AATGGGTAATTTTCTGAACCTAG-AAAC----------------------TGGAGCATGTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAATAGTCCACAAAAACACTTTGTAACTGATAACATAT-AGAAACAatttttgctacatttgacactacatactcttacagtgatgtct--ctggcagaacgttgtac---------------actcagtgggttgAGGAATAAGTTTCTGCAAAGAAGTGATAAGGCTTCATGTAAAGACATGCCAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGGCTGT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065136 414 - 98464013 AATTCTCCCTCTTACCTTCTGTTGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTTCTAGCAGGTCCTAAAGAAGCTGAAT------AC------AATGGGTAATTTTCTGAACCTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAGGCAAGAAACGGTCCTCAAAAGCACTTTATACCTGATACCATAT-AAAACCAATTTTTGCTACATTTGACATGACATACTCTTACAGTGATGTCT--CTGGCAGAACATTGCAT---------------ACTCCGTGGGTTGGGGAACAAGTTGCTGCAAAGAAGTGATAAGGCTTCTTGTAAAAGCATGCTAGTGTTAAAGAAAGATGCCCTATATGCCAGAAATTATAAGAAATTTGCATTATGACTAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741419 415 + 27742158 AATTCTCCCTCTTACCTTCTGTTGTCCTCTAGATATGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTCCTAGCAGGCCCTGCAGAAGCTGACT------AC------AATGGATCATTTTCTGAACCTAGAAAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACAGTCCTCAAAAGCACTTTATACCTAATACCATGT-AAAACCAATTTTTGCTACATTTGACATGACATACTCTTACAGTGATGTCT--CTGGCAGAACATTGCAT---------------ACTCAGTGGGTTGGGGAACAAGTTGCTGCAAAAAAGTGATAAGGCTTCTTGTGAAAGCATGCTAGTGTTAAAGAAAGATGCCCTCTATGCCAGAAATTATAAGAAATTTGCATTATGACTAC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274255 414 - 4835464 AATTCTCCCTCTTACCTTCTGTTGTCCTCTAGACGTGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTCCTAGCAGGCCCTGCAGAAGCTGGCT------AC------AATGGGTAATTTTCTGAACGTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGCCAGCATTCTCAGGGAAGCAAGAAACGGTCCTCAAAAGCACTTTATACCTGATACCAtat-aaaaccaatatttgctacatttgacatgacatactcttacagtgatgtct--ccggcagaacattgcat---------------actcagtgggttgcggaacAAGTTGCTGCAAAGAAGTGATAAGGCTTCTTGTAAAAGCATGCTAGTGTTAAAGAAAGATGCCCTCTATGCCAGAAATTATAAGAAATTTGCATTATGACTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740194 414 + 4093027 AATTCCCCCTCTTACCTTCTGTTGTCCTCTAGATGTGGTCCAGGGGATTGGGGTTTTCAGAAATGGTGTTTTTGCTGTGCCCTTTCCTAGTGGGCCCTGCAGAAGCTGACT------AC------AATGGGTAATTTTCTGAACCTAG-AAAT----------------------TGGAGCACTTAGTTTACTCTGCTTGTCAGCATTCTCAGGGAAGCAAGAAACGGTCCTCAAAAGCACTTTATACCTGATACCAtat-aaaaccaatttttgctacatttgacatgacatactcttacagtgatgtct--ctggcagaacattgcat---------------actcagtgggttgGGAAACAAGTTGCTGCAAAGAAGTGATAAGGTTTCTTGTAAAAGCATGCTAGTGTTAAAGAAAGATGTCCTATATGCCAGAAATTGTAAGAAATTTGCATTATGACTAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077322 388 + 30473821 AGTGCTCCATCTTCCCTTCTGTTATCTTCTAGATGTGGTCT--GGGGTTGAGAT-TTCAGAAGTGA------TGCT--------TCCCTACAGGCCCTGCAGTAGTTGCCT------AGCATTCCAATGGATATTTTTATGAACCTAG-AAAT---------------------GTGAGGCGCTTGGTGTATTCTGCTTATCTGCATTGTCAGGGAAGGAAGAAACAGTCCTCAGAAGCACTTTATAACTGATGCCACGTGAAAACCGACTTTGACTACATTTGAGGCAACACATTC-AACAGTGGTGTCTCCCTGGTAGGACATTGTAC---------------ATTC----------------AGTTACTGCCAGGAAGTGATAAGGCTTCCCA-AAAGGAATACTAGTGGCAAAGAAAGAC-TCTGACGTGCCAGAAATTGTAAGAAATTTGCATTATGACGAC i otoGar3.GL873534 C 0 I 1 s canFam3.chr20 16611456 411 + 58134056 --TTCTCGGCCTTTCCTCT-----ACCTCTAAATG----CCCAGAGACTTGGGCTTCCAGAAGTGATACTTTTTCAGTACCTTTTCCTAGCAAGCTCTGCAGTCGCTGACTGGCACAAC------AGTGGGCATTTTTCTGAACCTGG-AAGT---------------------GTGGAACACTTAGTTTACTCTGCTTTTCAGTATTGTCAGGAAAGCAAGAAACAGTTTTCAAAAGTGCTTTCTACCTGACACCATATGAAAACCAATTTTTGCTACGTTTGAGACAACACACTCTTACAGTGTGCTCT--CTGGTAGAGCATTGCTC---------------ATTCAGCCGGGCTGGGAGTAAGTTGCTGCAAGGAAGCGATAAGGCTTAATATAAAGGCACACTAGTGTTAAAGAAAGATATCTTGTATGCTAGACACTGTAAGAAATTTGCATCACGACTTG i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1867149 445 - 2187301 AATTCTCTACTTTTCCCTCTCTGTTCCTCTAAATGTGGTCCAACGGGGTGGGGTCTTAAGAAGAGAT------------TCCTTTCCTAGCAGGCCA-GCACTAGCTGACTGGCATCAT------AATGGGTTTTTTCCTGAATCTAG-GAATGTGTTTCCTGAATCTAGGAATGTGGAACTCTTAGTTTATGCT--TTGTCAGCATTTTCAGGGAAGCAGGAAACAATCCTCAAAATCACTTTTTACCTGATACAGTATGAAAATTTATTTTTGCTACATGTGAGACAACACATTCTTACAGTGATTGCTGTCTGGTAGAACATTGCACCGAGTGAGTTGTTGGACAGAGTGGGGTAGGGAATGAATTGCTGCAAGTAAGCGATAACCTTTTATATAAAGGCAAGCTAGTGTTAAAGAAATATTCCTCATATGCTGAAAATTATAAGAAATTTGCATCATGACTAT i dasNov3.JH563077 I 7693 C 0 e rhiRox1.KN296641v1 1388944 757 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=4718.000000 s hg38.chr14_KI270725v1_random 15744 1 + 172810 A s panTro5.chr3 202010286 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778310 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8296 1 - 17846 A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595013 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076249 1 + 204787373 G i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61008097 1 - 192460366 G i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11120340 1 - 17224310 G i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17432237 1 - 41321030 G i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64503798 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 889647 1 - 924385 G i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6730652 1 - 10587913 G i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1389701 1 - 1467263 G i rhiRox1.KN296641v1 I 757 I 35 s calJac3.chr15 46065550 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741834 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274669 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740608 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1867594 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45784614 373 - 149736546 I e canFam3.chr20 16611867 2 + 58134056 I e otoGar3.GL873534 11077710 1 + 30473821 I a score=432182.000000 s hg38.chr14_KI270725v1_random 15745 34 + 172810 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTT s panTro5.chr3 202010287 34 - 202621043 tcagagaatacggtcaggacagtaaagagttttT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778311 34 - 205426864 tcagagaatatggtcaggacagtaaagagttttT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8297 34 - 17846 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595014 34 + 86207423 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076250 34 + 204787373 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008098 34 - 192460366 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120341 34 - 17224310 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432238 34 - 41321030 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503799 34 - 101219884 TCAGAGAATATGCTTAGGACAGTAAAGAGTTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889648 34 - 924385 TCAGAGAATATAGTCAGGACAGTAAAGAGTTTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730654 34 - 10587913 TCAGAGAATATGGTCAGGACAGTAAAGAGTTTTT i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46065551 34 - 98464013 TCAGAGAATATGATAAGTATAGTAAAGAGTTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741835 34 + 27742158 TCAGAGAATATGATCAGTATAGTAAAGAATTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274670 34 - 4835464 TCAGAGAGTACGATGAATATAGTAAAGAGTTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740609 34 + 4093027 TCAGAGAATATGATCAGTATAGTAAAGAGTTTTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077711 34 + 30473821 TAAGAGAATATGGTCCGGACAGTAAAGAGAGTTT i otoGar3.GL873534 I 1 I 1 s canFam3.chr20 16611869 34 + 58134056 CAAGAAAATATGGTCAGGACAGTAAAGAGTTCTT i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1867595 30 - 2187301 --AGAAAATGTGGTTGGGACAGC--AGAGTTCTT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389702 35 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=13365.000000 s hg38.chr14_KI270725v1_random 15779 1 + 172810 T s panTro5.chr3 202010321 1 - 202621043 T i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778345 1 - 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8331 1 - 17846 T i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595048 1 + 86207423 T i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076284 1 + 204787373 T i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61008132 1 - 192460366 T i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11120375 1 - 17224310 T i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17432272 1 - 41321030 T i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64503833 1 - 101219884 T i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 889682 1 - 924385 T i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6730688 1 - 10587913 T i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1389737 1 - 1467263 T i rhiRox1.KN296641v1 I 35 I 147 s calJac3.chr15 46065585 1 - 98464013 T i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741869 1 + 27742158 T i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274704 1 - 4835464 T i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740643 1 + 4093027 T i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16611903 1 + 58134056 T i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867625 1 - 2187301 C i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45784614 373 - 149736546 I e otoGar3.GL873534 11077745 1 + 30473821 I a score=1602393.000000 s hg38.chr14_KI270725v1_random 15780 147 + 172810 GGTTCTCCTCAAATTAAAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCT-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGACA s panTro5.chr3 202010322 147 - 202621043 GGTTCTCCTCAAATTAAAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACtttaa---ttcct-tcaagagtgtcattaaataattcag---------------tttttttaa---gtatcctgcaaacacc-aa--aggttgaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778346 147 - 205426864 GGTTCTCCTCAAATTAAAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACtttaa---ttcct-tcaagagtgtcattaaataattcag---------------tttttttaa---gtatcctgcaaacacc-aa--aggttgaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8332 147 - 17846 GGTTCTCCTCAAATTAAAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACtttaa---ttcct-tcaagagtgtcattaaataatccag---------------tttttttaa---gtattctgcaaacacc-aa--aggttgaca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595049 147 + 86207423 GGTTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTCCGATATTCTA-----TAACTTTTTTATATTTTAA---TTCCA-TCAACAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGACA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076286 147 + 204787373 GATTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTTCAAACACC-AA--AGGCTGACA i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61008134 147 - 192460366 GATTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTTCAAACACC-AA--AGGCTGACA i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11120377 147 - 17224310 GATTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAATGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTTCAAACACC-AA--AGGCTGACA i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17432274 147 - 41321030 GATTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTG-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCAATAAATAATCCAG---------------TTTTTTTAA---GTATCCTGTAAACACC-AA--AGGCTGACA i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64503835 155 - 101219884 GGTTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTA-----TAACTTTTTTATACTTCAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG-------TTTTTTTTTTTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGACA i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 889684 147 - 924385 GATTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTG-----TAACTTTTTTATACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG---------------TTTTTTTAA---GTATCCTGTAAACACC-AA--AGGCTGACA i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6730690 145 - 10587913 GGTTCTCCTCAAATAACAAACAACTAATTCAATAAGTATGGAAATA-TGTTTTCAATATTCTG-----TAAC-TTTTTACACTTTAA---TTCCA-TCAAGAGTGTCATTAAATAATCCAG----------------TTTTTTAA---GTATCCTGCAAACACC-AA--AGGTTGACA i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46065586 149 - 98464013 AGTTCTTCTCAAATCACAGACAACTAATTCAATAAGGGTGGGAATG-TGTACTCAATAGTCTA-----TAACTTTTTTATGCTTTAA---TTTCA-ACAGGAGTGCCATTAAATAATCCAA---------------TTTTTTTAA---GTATCTTGCAAACACA-AAAGAGGTTGACA i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27741870 154 + 27742158 AGTTCTTCTCAAATCACAAACAACTAATTCAACAAGTGTGGGAATA-TGTCCTCAATATTCTA-----TAACTTTTTTATACTTTAA---TTTCA-ACAAGAGTACCATTAAATAATTCAG--------TTTTTTTTTTTTTTAA---GTATCCCGCAAACACA-AA--AGGTTGACA i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274705 160 - 4835464 AGTTCTTCTCAAATCACAAACAACTAATTCAATAAATGTTGGAATG-TGTCCTCGATATTCTA-----TAACTTTTTTATACCTTAA---TTTCA-AT--GAGTGCCATTAAATAATCCAGttttctttttttttttttttttAA---GTATCCTGCAAACACA-AA--AGGTTGTCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740644 150 + 4093027 AGTTCTTCTCAAATCACAAACAACTAATTCAATAAGTGTGGGAATG-TGTCCTCAATATTCTA-----TAACTTTTTTATGCTTTAA---TTTCA-ACAAGAGTGCCATTAAATAATCCAG------------TTTTTTTTTTAA---GTATCCTGAAAACACA-AA--AGGTTGACA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077746 147 + 30473821 AGTTCTTTTCAAATAACAAACAATTGCTATGAT-AGTTTGAAAATATTTTTTTCAATACTCGG-----TACCATTTTTTAAATGTAA---TTCCA-TCAAGAGTACTGTGGAATAATCCAG---------------TTTTTAAAC---GAATGCTGCAAACACA-AG--AGTTCGATC i otoGar3.GL873534 I 1 C 0 s canFam3.chr20 16611904 157 + 58134056 AGCTCTTCAAAAATCACAAACAAATTTTTCAATAATTGCCAAAGTA-GTTTTTAAATATTCAGAAACTTAATTTATTTTTACTTTAGTTCTTCCT-TCAAGAGTGCCATCAAATTATCCAG---------------TTTTTTTAAACTGTATTGATTATACA-A-GA--AGGTTGACA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867626 145 - 2187301 AGTTCTTCACAAATAACAAA----TTCTTCTGTAACCATGGATATAATTTTTTCAGTATTATG-----AAAC--TTTAATTTTTTAACT-TTCCATTCAAGGGTCACATCTAATAATTCAG----------------TTTTAAAA---ATATATTGTAATCACAGGA--AGGTTGACA i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389738 147 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=17290.000000 s hg38.chr14_KI270725v1_random 15927 1 + 172810 A s panTro5.chr3 202010469 1 - 202621043 a i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778493 1 - 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8479 1 - 17846 a i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595196 1 + 86207423 A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076433 1 + 204787373 A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008281 1 - 192460366 A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120524 1 - 17224310 A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432421 1 - 41321030 A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503990 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889831 1 - 924385 A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730835 1 - 10587913 A i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1389885 1 - 1467263 A i rhiRox1.KN296641v1 I 147 I 1134 s calJac3.chr15 46065735 1 - 98464013 A i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742024 1 + 27742158 A i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274865 1 - 4835464 A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740794 1 + 4093027 A i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077893 1 + 30473821 A i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612061 1 + 58134056 A i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867771 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45784614 373 - 149736546 I a score=712869.000000 s hg38.chr14_KI270725v1_random 15928 58 + 172810 TCAAAGTTTTAAGTCAA---------------------CATGTGA------AGTTGCCATTGCTACTT----ATCAGGGCAATAAAGTC s panTro5.chr3 202010470 58 - 202621043 tcaAAGTTTTAAGTCAA---------------------CATGTGA------AGTTGCCATTGCTACGT----ATCAGGGCAATAAAGTC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778494 58 - 205426864 tcaAAGTTTTAAGTCAA---------------------CATGTGA------AGTTGCCATTGCTACGT----ATCAGGGCAATAAAGTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8480 58 - 17846 tcaAAGTTTTAAGTCAA---------------------CTTGTGA------AGTTGCCATTGCTACTT----ATCAGGGCAATAAAGTC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595197 77 + 86207423 TCAAAGTTTTAAGTTGAAGGTCTGTAGCCATTTCCC--AACGTGA------AGTTGCCATTGCTACAC----ATCAGGGCAATAAAGTC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076434 79 + 204787373 TCAAAGTTTTAAATCGAAGCTCTGTAGCCATTTCATAACATGCGA------AGTTGCCATTGCTACAT----ATTAGGGCAATAAAGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008282 79 - 192460366 TCAAAGTTTTAAATCGAAGCTCTGTAGCCATTTCATAACATGCGA------AGTTGCCATTGCTACAT----ATTAGGGCAATAAAGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120525 79 - 17224310 TCAAAGTTTTAAATCGAAGCTCTGTAGCCATTTCATAACATGCGA------AGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432422 79 - 41321030 TCAAAGTTTTAAATTGAAGCTCTGTAGCCATTTCACAACATGCGA------AGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64503991 79 - 101219884 TCAAAGTTTTAAATTGAAGGTCTGTAGCCATTTCACAACATGGGA------AGTTGCCATTGCTATAT----ATCAGGGCAATAAAGTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889832 79 - 924385 TCAAAGATTTAAATTGAAGCTCTGTAGCCATTTCACAACATGCGA------AGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730837 79 - 10587913 TCAAAGTTTTAAATTGAAGGTCTGTAGCCATTTCACAACATGGGA------AGTTGCCATTGCTACAT----ATCAGGGCAATAAAGTC i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46065736 78 - 98464013 TTAAAGTTTTATGTTGAAGG-CTGTAGCCATTTCCCAACAGGTGA------AGTTGCCATTAATATGT----ATCAGGGCAATAAAGTC i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742025 79 + 27742158 TCAAAGTTTTAAATTGAAGGCCTATAGCCATTTCCCAACAGGTGA------AGTTGCCATTAATATGT----ATCAGGGCAATAAAGTC i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274866 79 - 4835464 TCAAAGTTTTAAATTGAAGGCCTGTCGCCATTTCCCAACAGGTGA------AGTTGCCATTAGTATGT----ATCAGGGCAATAAAGTC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740795 83 + 4093027 TCAAAGTTTTAAATTGAAGTCCTGTAGCCATTTCCCAACAAGTGA------AGTTGCCATTAATGTGTATCAATCAGGGCAATAAAGTC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077894 75 + 30473821 CCAGAGTTTTAAATTGAAGGTCTGTAGATGTTTCCCGTCACATGA------AATTGCCTTTGGCACAA----ATCGGGTC----AGGTC i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612062 78 + 58134056 CCAAGGTTTTAAATTGAGGGTCTGTGATCATTTCCCAACACATAT------TATGGCCACTGCTACAT----AT-AGGGCCAGTAAGTC i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1867772 85 - 2187301 CCAAGGTTTGAAATTCAAGCTATCTAATCATTTCCAAATACAAGATATTTTTATTGCTAGTGCCAAAT----ATCTGGTCAATAAAGTC i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=223086.000000 s hg38.chr14_KI270725v1_random 15986 19 + 172810 AATGACTGATATATTTTTT s panTro5.chr3 202010528 19 - 202621043 AATGACTGATATATTTTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778552 19 - 205426864 AATGACTGATATATTTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8538 19 - 17846 AATGACTGATATATTTTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595274 19 + 86207423 AATGACTGATATATTTTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076513 19 + 204787373 AATGACTGATATATATTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008361 19 - 192460366 AATGACTGATATATATTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120604 19 - 17224310 AATGACTGATATATATTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432501 19 - 41321030 AATGACTGATATATATTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504070 19 - 101219884 AACGACTGATATATATTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889911 19 - 924385 AATGACTGATATATATTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730916 19 - 10587913 AATGACTGATATATATTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065814 19 - 98464013 AATGACTGATATATTTTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742104 19 + 27742158 AATGACTGATATATTTTTT i saiBol1.JH378125 C 0 C 0 s cebCap1.NW_016107467v1 274945 19 - 4835464 AATGACTGATATATTTTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740878 19 + 4093027 AGTGACTGATATATTTTTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077969 19 + 30473821 CATGACTGAGATTTTTTCT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612140 19 + 58134056 AATGACTGACATCTTTGTA i canFam3.chr20 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e dasNov3.JH563077 1867857 0 - 2187301 C a score=228241.000000 s hg38.chr14_KI270725v1_random 16005 31 + 172810 CAG--TTTTTTAAATTTATTTTTTAATTAAATT s panTro5.chr3 202010547 33 - 202621043 CAGTTTTTTTTAAATTTATTTTTAAATTAAATT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778571 33 - 205426864 CAGTTTTTTTTAAATTTATTTTTTAATTAAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8557 31 - 17846 CAG--TTTTTTAAATTTATTTTTTAATTAAATT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595293 32 + 86207423 CAGAGTTTTTT-AATTTATTTTTAAATTAAAtt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076532 31 + 204787373 CAG--TTTTTTAAATTTATTTTTAAATTAAAtt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008380 31 - 192460366 CAG--TTTTTAAAATTTATTTTTAAATTAAAtt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120623 31 - 17224310 CAG--TTTTTTAAATTTATTTTTAAATTAAAtt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432520 31 - 41321030 CAG--TTTTTTAAATTTATTTTTAAATTAAAtt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504089 31 - 101219884 CAG--TTTTTAAAATTTATTTTTTAATTAAAtt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889930 31 - 924385 CAG--TTTTTTAAATTTATTTTTAAATTAAAtt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730935 30 - 10587913 CAG--TTTTTTAAATTTATTTTT-AATTAAAtt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065833 32 - 98464013 CAG-GTTTTCAAAATTTATTTTTTAAATAAGTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378125 27742123 32 + 27742158 CAG-GTTTTCAAAatttatttatttatttattt i saiBol1.JH378125 C 0 N 0 s cebCap1.NW_016107467v1 274964 32 - 4835464 CAG-GTTTTCAAAATTTATTTTTTAAATAAGTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740897 32 + 4093027 CAG-GTTTTCAAAATTTATTTTTTAAATAAATT i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612159 25 + 58134056 --------TAGACAACTACCTAACAATTCCATT i canFam3.chr20 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e dasNov3.JH563077 1867857 0 - 2187301 C e otoGar3.GL873534 11077988 0 + 30473821 C a score=4256985.000000 s hg38.chr14_KI270725v1_random 16036 463 + 172810 -----------------TTAGTGtttattttagatatggggggataca----tgtgcaggtttgttacat--aggtatattgc----ataatcctgagtttggg------------------------------------------ggtatggatcctgtcatccag--------------ggagtta--------gcataggatccaataggtagtttttcaacccttccccacctctctctcccctctctta----------------gtccccggtgtctattgcttccatctacatgtccatgtaaactcaatgtccagctcttattcattagtgagaacatgtggtatttgattttctgtttctgcattaattcac-----ttaggattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcatgtctttgttattgtgaatagcacagcaaagaaaatataagt s panTro5.chr3 202010580 463 - 202621043 -----------------TTAGTGtttattttagatatggggggataca----ggtgcaggtttgttacat--aggtatattgc----ataatcctgagtctggg------------------------------------------ggtatggatcctgtcatccag--------------gtagtta--------gcataggatccaataggtagtttttcaacccttccccaccgctctctcccctctttta----------------gtccccggtgtctactgcttccatctacatgtccatgtaaactcaatgtccagctcttattcattagtgagaacatgtggtatttgattttctgtttctgcattaattcac-----ttacgattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttatgatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcgtgtctttgttatcgtgaatagcacagcaaagaaaatataagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204778604 463 - 205426864 -----------------TTAGTGtttattttagatatggggggataca----ggtgcaggtttgttacat--aggtatattgc----ataatcctgagtctggg------------------------------------------ggtatggatcctgtcatccag--------------gtagtta--------acataggatccaataggtagtttttcaacccttccccaccgctctctcccctctttta----------------gtccccggtgtctactgcttccatctacatgtccatgtaaactcaatgtccagctcttattcattagtgagaacatgtggtatttgattttctgtttctgcattaattcac-----ttacgattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttatgatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcgtgtctttgttatcgtgaatagcacagcaaagaaaatataagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 8588 459 - 17846 -----------------TTAGTGtttattttagatatggggggataca----tgtgcaggtttgttacat--aggtatattgc----ataattctgagtttggg------------------------------------------ggtatggatcctgtcatccag--------------gtagtta--------gcataggatccaataggtag-ttttcaacccttccccacctctctctcccctctttta----------------gtccccagtgtctattgcttccatctacatgt-catgtaaactcaatgaccagctcttattcattagt-agaacatgtggtatttgattttctgtttctgcattaattcac-----ttaggattatggacttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgactgcatagtgttccttggtacctgtatgtaccacattttctttatccaatccaccactaatggatacctaggttgagttcatgtctttg-tattgtgaatagcacagcaaagaaaatataagt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595325 463 + 86207423 -----------------ttagcatttattttagatatggggggataaa----tgtgcaggtttgttacgt--aggtatattgc----ataatcctgagtttggg------------------------------------------ggtatggatcctgtcatccag--------------gtagtta--------gcataggatccaataggtagtttttcaacccttccccacctctctctcccctctttta----------------gtccccagtgtctattgcttccatctacatgtccatgtaaactcaatgtccagctcttactcattagtgagaacatgtggtatttggttttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacagaatttgattctttattacaactgcatagtgttccctggtacctatatgtaccacattttctttatctaatccaccaataatggatacctaggttgagttcatgtctttgttatcgtgaatagcacagcaaagaacatatgagt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66076563 457 + 204787373 -----------------ttagcttttattttagatat-gggggatgca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccag--------------gaagtta--------gcataggaccaaataggtagtttttcaacctttcctcacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgatatcatgtatagcacaccaaagaacacatgagt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008411 457 - 192460366 -----------------ttagcttttattttagatat-gggggatgca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccag--------------gaagtta--------gcataggaccaaataggtagtttttcaacctttccccacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgatatcatgtatagcacaccaaagaacacatgagt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11120654 457 - 17224310 -----------------ttagcttttattttagatat-gggggatgca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccag--------------gaagtta--------gcataggaccaaataggtagtttttcaacctttccccacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttgtgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgatatcatgtatagcacaccaaagaacacatgagt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17432551 457 - 41321030 -----------------ttagcttttattttagatat-gggggataca----tgtgaaggtttgttacat--aggtttattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccag--------------gaagtta--------gcataggaccatataggtagtttttcaacctttccccacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgaaaacatttcgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcaacttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgctatcatgtatagcacaccaaagaacatatgagt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504120 458 - 101219884 -----------------ttagcttttattttagatacggggggataca----tgtgaaggttttttacat--aggtatattgt----ataatgctgaatttggg------------------------------------------ggtatggatcctgtcatccag--------------gaagtta--------gcataggaccaaataggtagtttttcaacctttccccacttctctctcctctctttta----------------gtccccggtgtctattgcttctatctacatgtccacgtatactcaatgttcagctcttactcattagtgagaacatttcgtatttgattttctgtttctgcattaattcac-----ttgggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggatgagttcatgtctttgctatcatgtatagcacagcaaagaacatatgagt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 889961 457 - 924385 -----------------ttagcttttattttagatat-gggggataca----tgtgaaggtttgttacat--aggtatattgt----gtaatgctgaatttggg------------------------------------------ggtatggatcctgtcatccag--------------gaagtta--------gcataggaccaaataggtagtttttcaacctttccccacttctctctcctctctttta----------------gtccccggtgtctattgcttccatctacatgtccatgtatactcaatgttcagctcttactcattagtgaaaacatttcgtatttgattttctgtttctgcattaattcac-----ttaggattatggccttcagcttaatccatgttgcttaaaaggacataatttgattctttattatgacta-----tgttccttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgctatcatgtatagcacaccaaagaacatatgagt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6730965 478 - 10587913 -----------------ttagcttttattttagatat-gggggataca----tgtgaaggtttgttacat--aggtatattgt----gtaatgttgagtttggg------------------------------------------gatatggatcctgtcatccag--------------gaagtta--------gcataggaccaaataggtagtttttcaacctgtccctacttctctctcctctcttttattgcttccatctacatgtctacagtgtctattgcttccatctacatgtccacgtatactcaatgttcagctcttactcattagtgagaacattttgtatttgattttctgtttctgcattaattcac-----ttaggattatgtccttcagcttaatccatgtttcttaaaaggacataatttgattctttattatgactacatagtgttctttggtacctatatgtaccacattttctttatccaatccaccactaatggacacctaggttgagttcatgtctttgctatcatgtgtagcacagcaaagaacatatgagt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46065865 454 - 98464013 -----------------TTAGCTCTTG----AGATATGGgaggatacc----tgtgcaggactgttacat--agatacatggc----ataatgctgagttttca------------------------------------------ggtatggatcctgtcatccag--------------atagtta--------gcataggacctcataggtagtttttcaacccttccccgcttctctccc-cgtc--tta----------------gtccccagtgtctgttgtttccatctacatgtccatgtatactcaatgattagctcttactcactaatgaaaacgtg--gtatttggttttctgttcctgcattaaatcac-----ttaggattatggcctccaccttaatccatgctgttccaaaggacataatttccttctttattatgactgtgtagtgttccttggtacctatgtgtaccacattttctttactgaatccaccactgatggacacctaggttgatttcatgtctttgttatcatgaataacacagcaaagaacatacgagt i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2550585 455 - 2763108 -----------------TTCGCTCTTG----AGATAGGGgaggataca----tgtgcaggactgttacat--agatatatggc----atattgctttgttttca------------------------------------------ggtatggatcctgtcatccag--------------acagtta--------gcacaggacttcacaggtagtttttcaacccttccccacttctctcccgcctc--tta----------------gtccccagtgtctgttgtttccatctacatgtccatgtatactcaatgttcggctcttactcactaacaaaaacatg--gtatttggttttctgttcctgcattaattcat-----ttaggattatggcctccagcttaatccatgctgttccaaaggacataatttcattctttattatgactgtgtagtgttccttggtacccatatgtaccacattttctttatcgaatccaccactgatggacacctaagttgatttcatgtctttgttattgtgaataacacagcaaagaacatacgagt i saiBol1.JH378290 N 0 C 0 s cebCap1.NW_016107467v1 274996 455 - 4835464 -----------------TTAGCTCTTG----AGATATGGgaggataca----tgtgcaggactgttacat--agatatatggc----acaatgctgagttttcg------------------------------------------ggtatggatcctgtcatccag--------------acagtta--------gcataggacctcacaggtagtttttcaacccttccccacttctctcccccttc--tta----------------gtccacagtgtctgttgtttccatctacatgcccatgtatactcaatgttcagctcttgctcactaatgaacacgtg--gtatttggttttctgttcctgcattaattcac-----ttaggattatggcctccagcttaatccatgctgtttcaaaggacataatttcattctttattatgactgtgtagtgttccttggtacctatgtgtaccacattttctttatcaaatccaccactgatggacacctaggttgatttcatgtctttgttatcgtgaataacacagcaaagaacatatgagt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3740929 455 + 4093027 -----------------TTAGCTCTTG----AGATATGGgaggataca----tgtgcaggactgttacat--agatacatggc----ataatgctgagttttcg------------------------------------------ggtatggatcctgtcatccag--------------atagtta--------gcataggacctcacaggtagtttttcaacccttccccacttctctccctcctc--tta----------------gtccccagtgtctgttgtttccatctacatgtctatgtatactcaatgttcagctcttactcactaatgaaaatgtg--gtatttggttttctgttcctgcattaattcac-----ttaggattatggcctccagcttaatccatgctgttccaaagggcataatttcattctttattatgactgtgtagtgttccttggtacctatgtgtaccacattttctttatcgaatccaccactgatggacacctaggttgatttcatatctttgtaatcgtgaataacacagcaaagaacatacgagt i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612184 512 + 58134056 TTGACTGTCCTCACTGTGTAGCTTCTTCTCTGGAT-------GATACAGTGCTGTGCCAATTTTTTAAACTGTGttttattgtagcaagaacactgaacatgggctctaacctcttaaatttttaaaaatgtacattactgttgaccataggtactgtgtcatacagtggatttatagagcgtatttatattgcttgaataaaactttgtctgttgattagtaactcctc----attctctctcccccc----a----------------gtccttggtaaccaccattctgctctttgattcaatgaatgtgatgatttcagatacctcatacaagtggaatcatgcagtatttggctttctgaaatggc-ttatttcacattcattaacataacatcctccagtctcattcatgttgtcacatattgcagaatt-----------------------gtattccgttgtatgtatatgt--ctaattttctttatgcattgatc------tggaacattttgttgttcccacatcttggctattgtgaatagtgctgcaaagaacatgggaat i canFam3.chr20 C 0 T 554 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e dasNov3.JH563077 1867857 0 - 2187301 C e otoGar3.GL873534 11077988 0 + 30473821 C a score=59668.000000 s hg38.chr14_KI270725v1_random 16499 7 + 172810 gcgtgtA s panTro5.chr3 202011043 7 - 202621043 gcgtgCA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779067 7 - 205426864 gcgtgCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9047 7 - 17846 gcgtgCA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595788 7 + 86207423 gcatgtA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077020 7 + 204787373 gcatgtA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008868 7 - 192460366 gcatgtA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121111 7 - 17224310 gcatgtA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433008 7 - 41321030 gcatgtA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504578 7 - 101219884 gcatgtA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890418 7 - 924385 gcatgtA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731443 7 - 10587913 gcatgtA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066319 7 - 98464013 acatgtg i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551040 7 - 2763108 gcatgtg i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275451 7 - 4835464 gcatgtg i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741384 7 + 4093027 acatgCA i aotNan1.NW_018502033v1 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e dasNov3.JH563077 1867857 0 - 2187301 C e canFam3.chr20 16612696 554 + 58134056 T e otoGar3.GL873534 11077988 0 + 30473821 C a score=18952.000000 s hg38.chr14_KI270725v1_random 16506 2 + 172810 CT s panTro5.chr3 202011050 2 - 202621043 CT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779074 2 - 205426864 CT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9054 2 - 17846 CT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595795 2 + 86207423 CT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077027 2 + 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008875 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121118 2 - 17224310 CT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433015 2 - 41321030 CT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504585 2 - 101219884 CT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890425 2 - 924385 CT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731450 2 - 10587913 CT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066326 2 - 98464013 CT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551047 2 - 2763108 ct i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275458 2 - 4835464 ct i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741391 2 + 4093027 GT i aotNan1.NW_018502033v1 C 0 C 0 s dasNov3.JH563077 1867857 2 - 2187301 CA i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e canFam3.chr20 16612696 554 + 58134056 T e otoGar3.GL873534 11077988 0 + 30473821 C a score=205737.000000 s hg38.chr14_KI270725v1_random 16508 18 + 172810 TAACTGATGTATTTGTAC s panTro5.chr3 202011052 18 - 202621043 TAACTGATGTATTTGTAC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779076 18 - 205426864 TAACTGATGTATTTGTAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9056 18 - 17846 TAACTGATGTATTTGTAC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595797 18 + 86207423 TAACTGATGTATTTATAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077029 18 + 204787373 TAACTGATGTATTTGTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008877 18 - 192460366 TAACTGATGTATTTGTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121120 18 - 17224310 TAACTGATGTATTTGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433017 18 - 41321030 TAACTGATGTATTTGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504587 18 - 101219884 TAACTGATGTATTTGTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890427 18 - 924385 TAACTGATGTATTTGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731452 18 - 10587913 TAACTGATGCATTTGTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066328 18 - 98464013 TAACCGATATACTTGCAT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551049 18 - 2763108 taactgatatacttgtat i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275460 18 - 4835464 taactgatatacttgtat i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741393 18 + 4093027 TAACTGATATACTTGTAT i aotNan1.NW_018502033v1 C 0 C 0 s canFam3.chr20 16612142 18 + 58134056 TGACTGACATCTTTGTAT i canFam3.chr20 T 554 C 0 s dasNov3.JH563077 1867859 18 - 2187301 TAAATAATATTTTTATAT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I e otoGar3.GL873534 11077988 0 + 30473821 C a score=781289.000000 s hg38.chr14_KI270725v1_random 16526 76 + 172810 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCTCTG-ATGAAACAGC-----------GTCAAGACA----A s panTro5.chr3 202011070 76 - 202621043 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCCCTG-ATGAAACAGC-----------GTCAAGACA----A i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779094 76 - 205426864 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCCCTG-ATGAAACAGC-----------GTCAAGACA----A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9074 76 - 17846 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTGTATGTCGTCTGCTCTG-ATGAAACAGC-----------GTCAAGACA----A i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595815 76 + 86207423 AGACCACCTCTTAACAACTCCATTTTGACTGGCCTTTTTATATATCATCTGCTCTG-ATGATTCAGT-----------GTCATGACA----A i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077047 76 + 204787373 AGACAACCTCTTAACAACTCCATTTTGACTGGCCTTCCCATATATCATCTGCTCTA-ATGATGCAGT-----------GTCATGACA----A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61008895 76 - 192460366 AGACAACCTCTTAACAACTCCATTTTGACTGGCCTTCCCATATATCATCTGCTCTA-ATGATGCAGT-----------GTCATGACA----A i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121138 76 - 17224310 AGACAACCTCTTAACAACTCCATTTTGACTGGCCTTCCCATATATCATCTGCTCTA-ATGATGCAGT-----------GTCATGACA----A i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433035 76 - 41321030 AGACAACCTCTTAACAACTCCATGTTGACTGGCCTTTCTATATATCATCTGCTCTA-ATGATGCAGT-----------GTCATGACA----A i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64504605 76 - 101219884 AGACAACCTCTTAACAACCCCATTTTGACCGGCCTTTCTATATATCATCTGCTCTA-ATGATGCAGT-----------GTCATGACA----A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890445 76 - 924385 AGACAACCTCTTAACAACTCCATGTTGACTGGCCTTTCTATATATCATCTGCTCTA-ATGATGCAGT-----------GTCATGACA----A i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731470 76 - 10587913 AGACAACTTCTTAACAACTCCATTTTGACCGGCCTTTCTATATATCATCTGCTCTA-ACGATGCAGT-----------GTCATGACA----A i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066346 87 - 98464013 AGACTAATTCTTAACTACTCCATTTTGACTGGCCTTTCAATACATCTTCTGCTCCA-ATGATACAGTGTTGATAGAGGGTCATGGCA----A i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551067 76 - 2763108 agactacttcttAACTACTCCATTTTGACTGGCCTTTCTATATATCTTCTGCTCCA-ATGTTACAGT-----------GTCATGACA----G i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275478 76 - 4835464 agactacttcttAACTACTCCATTTTGACTGGCCTTTCTATATATCTTCTGCTCCA-ATGATACAGT-----------GTCATGACA----A i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741411 74 + 4093027 AGACTACTTCTTAACTACTCCATTTTGACTGGCCTTTCTATGTAACTTCTGCTCCA-ATGAT--AGT-----------GTCATGACA----T i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11077988 79 + 30473821 AGAC-GCTACTGCATGACTCCATGTGGA-TGGGCTTTGTCTGTACCTTCTGCTCTGCGTGATACAGT-----------GTCAGGACAAGGTA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612160 77 + 58134056 AGACAACTACCTAACAATTCCATTTTGACTGTCCTCACTGTGTAGCTTCTTCTCTGGATGATACAGT-----------GCTGTGCCA----A i canFam3.chr20 C 0 I 552 s dasNov3.JH563077 1867877 68 - 2187301 AGACCACTGTTTGATGTGTACATTTTGATCAGCCTCTC----TACCTTTTGCCATG-G----ATAGA-----------GTAATTACA----A i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=4825459.000000 s hg38.chr14_KI270725v1_random 16602 424 + 172810 TTTAAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTACTTTTTTGCTCTTTGGATCTCAATTGAGCCAAGCCCTCCTATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-agactacatagactaaaaatcca---ctctcaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttgtcat-ctttttcttatttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagattgaatgagtta----agataaagcactcaaactatataaatgtcttattgtactcagagctatgttaagtgttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG s panTro5.chr3 202011146 427 - 202621043 TTTAAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTACTTTTTTGCCCTTTGGATCTCAATTGAGCCAAGCCCTCCTATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-acactacatggactaaaaatcca---ctcccaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttgtcat-ctttttcttatttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagatggaatgagttaatacagataaagcactcaaactatataaatgtcttattgtactcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779170 427 - 205426864 TTTAAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTACTTTTTTGCCCTTTGGATCTCAATTGAGCCAAGCCCTCCTATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-acactacatggactaaaaatcca---ctcccaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttgtcat-ctttttcttatttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagatggaatgagttaatacagataaagcactcaaactatataaatgtcttattgtactcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9150 428 - 17846 TTTAAGAGTATCTTTGCACAAGTTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTACTTTTTTGCCCTCTGGATCTCAATTGAGCCAAGCCCTCCTATTGCACATCTCCTTGTC--ATTTTTTAA--TTATACTTTctctgtgacc-agactacatagactaaaactcca---ctcccaccacttaattaca-tgtgaacatgaacagactcatctagcctgactttgtcat-ctttttcttatttgtcaaatagagataataacagtagct-ttt--cataaggttgttgggaagattgaatgagttaatacagataaagcactcaaactatataaatgtcttattgtactcagagctatgttaagtgttaggtattattACATTTATTATCGGTATTCACATTTTATTATTGTTGTATTGGTGGGCATACAGGCTGCTTTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67595891 427 + 86207423 TTTAAGAGTACCTTTGCACAAGTTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTATTTTTTTGCCCTTTGGATCTCAATTGAGTCAAGCCCTCCTATTGCACCTCTCCTTGTC--ATTTTTTAA--TTCTACCTTctctgtgacc-agactacatgggctaaaaatcca---ctcccaccacttaattaca-tgtgaacatgaacagactcacctagcctgactttgtcat-ctttttcttatttgtcaaatagagataataacagtagct-ttt--tacaaggttgttgggaagattgaatgagttaatacagataaagcactcaaactatataaatgtcttatagtactcagagctatg-taagtgttaggtattattACATTTATTATCAGTATTCACATTTTATTATTGTTTAATTGGTAGGAATACAGGCTGCTTTG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077123 427 + 204787373 TTTAAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCTTCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagcctgattttgtcac-ctttttcttatttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGgaatacaggctgctttg i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61008971 427 - 192460366 TTTAAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCTTCTCTCT-----TTACTTTTTTGTCCTTTGTATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTATA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagcctgattttgtcac-ctttttcttatttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGCTTTG i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11121214 425 - 17224310 TTTAAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCTTCTCTCT-----TTACTTTTT--TCCTTTGGATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagcctgattttgtcac-ctttttcttatttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgtactcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGCTTTG i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17433111 427 - 41321030 TTTAAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCTTCTCTCT-----TTACTGTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatgaactaaaaatcca---ctcccatcacttaattacc-catgaagatgaacagattcatttagcctgattttgtcac-ctttttcttatttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctata-taagtgttaggtattactACATTTATTATCGGTATTCACACTTTATTATTGTTATAGTGGTGGGAATACAGGCTGTTTTG i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64504681 427 - 101219884 TTTAAGAGTACATTTGCACAAAGTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatggactaaaaatcca---ctcccatctcttaattacc-cgtgaagatgaacagattcatttagcctgattttgccac-ttttttcttatttgtcaaagagagataataacagtagct-ttt--cataaggttgttgcaaagattgaatgagttaatacagataaagcactcaaaccatgtaaatgtcttattgcgctcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGCTTTG i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 890521 427 - 924385 TTTAAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAATACTCTTCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacatgaactaaaaatcca---ctcccatcacttaattacc-cgtgaagatgaacagattcatttagcctgattttgtcac-ctttttcttatttgtcaaagagagataataacagtagtt-ttt--cataaggttgttgcgaagattgaatgagttcatacagataaagcactcaaactatgtaaatgtcttattgcactcagagctatg-taagtgttaggtattattACATTTATTATCGGTATTCACACTTTATTATTGTTGTAGTGGTGGGAATACAGGCTGTTTTG i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6731546 427 - 10587913 TTTAAGAGTACCTTTGCACAAGGTCTTCCCTTCTGAAACACTCTTCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAATTGAATCAAGCCCTCCTATTGCACCTCTCCTTGCC--TTTTTTAAA--TTATACCTTctctgtgacc-agactacttggactaaaaatcca---ctcccatcacttaattacc-cgtgaagacgaacagattcatttagactgattttgtcac-ctttttcttatttgtcaaagagagataataacagtagct-ttt--cataaggttgttgcgaagattgaatgagttaatacagataaagcactcaaactatgtaaatgtcttgttgcgctcagagctacg-taagtgttaggtattattACATTTATTATCTGTATTCACATTTTATTATTGTTGTAGTGGTGGgaatacaggctgctttg i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46066433 428 - 98464013 TTTAAGGGCACCTTAGTACAAGTTTTTCCCTTTTGAAACACTCTTCTCTCT-----TTACTTTTTTGTCCTTTGGATCTCAACTGTGTCAGGCCCTCCTATTGCAGGTTTCCTTGTCA-TTTTGTTTA--TTATATCTTCTCTGTGTCCAAAAGTACATAGACTAAAAATTCA---CTCCCATTACTTAATTTAAgtgtgaacatgagcagattcatttagtcttactttgtcacattttttcttatttgtcaaatagacgtaataacagtagct-ttt--cataaggtggttgagaagattgaatgagttaacacagacaaagcactcaaactatataaatgtcttattgtgctcacaactatg-taagtgttaggtattattACATTTATTACTGGTATTCACATTTTATTATGGTTG---TGGTGGGAATTCAGGCTGCTTTG i calJac3.chr15 C 0 I 1 s saiBol1.JH378290 2551143 425 - 2763108 TTTAAGAGTACCTTAGCACAAGCTTTTCCCTTTTGAAACACTCTTCTCTCT-----TGACTTATTTGTCCTTCGGATCTCAACTGAGTCAGACCCTCCTATTGCACATTTCCTTGTCA-TTTTTTTTAAGTTATATCTTctctgtgtcc-agagtacatggactaaaaattca---ctcccatttattaatttcaatgtgaacatgaacagaataatttagtctgactttgtcacattttttcttatttgtcaaatagaggtaataacagtagct-ttt--cataaggtggttggaaagat----tgagttaacacagataaagcactcaaacaatataaatgtcttattgtgctcagaactatg-taagtgttaggtattattACATTTATTACTGGTATTCACATTTTATTATTGTTG---TGGTGGGAATACAGGCTGCTTTG i saiBol1.JH378290 C 0 I 1 s cebCap1.NW_016107467v1 275554 425 - 4835464 TTTAAGagtaccttagcacatgcttttcccttttgaaacgctcttgtctct-------acttttttgTACTTTGGATCTCAACTGAGTCAGGCCCTCCTATTGAACGTTTCCTTGTCA-TTTTTTTTA--TTATATCTTctctgtgtcc-agagtacatggactaaaaattca---ctaccattacttaatttcagtgtgaacatgaacagattcatttagtctgactttgtcacattttttcttatttgtcaaatagaggtaataacagtagct-ttt--cataagatggttgggaagattgaatgagttaacacagataaatcactcaagcgatataaatgtcttattgtgctcaaaactatg-taagtgttaggtattattACATTTATTACTGGTATTCACATTTTATTATTGTTG---TAGTGGGAATACAGGCTGCTTTG i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3741485 423 + 4093027 TT---GAGTACCTTAGCACAAGCTTTTCCATTTTGAAACACTCTTCTCTCT-------ACTTTTTTGTCCTTTGGATCTCAACTGAGTCAGGCCCTCCTATTGCACATTTCCTTGTCATTTTTTTTTA--TTATATCTTctctgtatcc-agagtacatggactaaaaatcca---ctcccattacttaatttcaatgtgaacatgaacagattcatttagtctgactttgtcacattttttcttatttgtcaaatagaggtaataacagtagtt-ttt--cataaggtggttgggaagattgagtgagttaacacagataaagcactcaaactataaaaatgtcttaatgtgctcagaactatg-taagtgttaggtattattACATTTATTACCGGTATTCACATTTTATTATTGTTG---TGGTGGGAATACAGGCTGCTTTG i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11078067 407 + 30473821 CTAAACAGTACCTCGG-GTACAGTTTCCCCTTCTGGACTACTTTTCTCTCT-----TCACTTTTT-GTCCTTTGGATCTCAACTGATTCAAACCCTTCCCCTACACATGTCCTTCTC--ATGTGTTTA--TTATGCGTTctgtgtggcc-agattgcctggactcaaaatcca---gctccatcacttacttgtgatgggaccttaagcagattcatttagcccaactttgtt-t-aatgtccttatttgtccgacagggctaataatgatgctt-ttt--catagcattgctaggaagattgaatgag-taatacagataaaggacttcag------aggtgccttattgcacttagaactgtg-taagtgttaagtattgttACATTTATTATTAGCATT-GTATTTTATCCT----------GTAGGAATACAGGATGCTTGG i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16612789 423 + 58134056 tttaaggGCA--TGTGCACAAGTTCTTCTGTTTTGGAACACTCTTTTCCCT-----TCATCTTTTCATCCTTTGGATCTCAATTTAGTTAAGGCCTCCTATTGC----CCTCTCTTC--ATTCATCAG--CTATGCCTCccctgcactc-agactgcatggactcaaaatccagctctgtcagcattaatttgcagtgtaaacttaaacagagtcatttaatctgcctttgccac-aattttctttattgtaaaatagggataatattaatactt-tttaaaatagggttgctggaaaaactaaatgagttaatacaggaaaaacat----actacataaatgctacattgcatttagagctatg-taaatgttaactattaGTAAGTTCAGTATTGATATTGGTATGCTATTATTACTGTGGTGGTGGGAATACAGATTGTTTTG i canFam3.chr20 I 552 C 0 s dasNov3.JH563077 1867945 408 - 2187301 TTTAAGAATTcctttgcacaa-ttcttcctttgtggaatattc-tctacctaactaatacctttttatcctttggatttcagctcagtcaagcctcctTATTGTACCTCTCCTAGGC--ATTCATTAA--TTATGC-TTAtctatggtc-agactgctttgtctcaaaattca---gttccatcatttgctggcattgtaatcttgagcagattcatttaagtttcctttgccac-aattgccctatttt-----------tagcaatagtacctattt--tataaggttgttgggaagattgaatgagttattataggtaaaacacttagaCTACATAAATGCTTTATTGCATAAAGAAC----------ATTAGCTATTATTATATTTATTATTGCTATTGGTATTTTGTTATTGTGA---TGGTGGGAATTCAGGTTGCCTTA i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1389886 1134 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=16511.000000 s hg38.chr14_KI270725v1_random 17026 1 + 172810 G s panTro5.chr3 202011573 1 - 202621043 G i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779597 1 - 205426864 G i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9578 1 - 17846 G i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596318 1 + 86207423 G i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077551 1 + 204787373 g i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61009399 1 - 192460366 G i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11121640 1 - 17224310 G i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17433539 1 - 41321030 G i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64505109 1 - 101219884 G i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 890949 1 - 924385 G i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6731973 1 - 10587913 g i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1391020 1 - 1467263 g i rhiRox1.KN296641v1 I 1134 I 714 s calJac3.chr15 46066862 1 - 98464013 G i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2551569 1 - 2763108 G i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 275980 1 - 4835464 G i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3741909 1 + 4093027 G i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11078474 1 + 30473821 G i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613212 1 + 58134056 G i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1868353 1 - 2187301 A i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45784614 373 - 149736546 I a score=1665826.000000 s hg38.chr14_KI270725v1_random 17027 140 + 172810 ATACCCTTggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTGG s panTro5.chr3 202011574 139 - 202621043 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTG-GG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779598 140 - 205426864 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9579 140 - 17846 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacacaaacat--gcttcacaaatgtctgttgGCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAAGTGTGG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596319 140 + 86207423 ATACCCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc----cacacacacaaagacat--gcttcacaaatgtctattgaCAAATCACGTAAATGGCATGGCTT-ACTGATGTCTAACTGTGG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077552 140 + 204787373 ataccctgggaataatgttaatctttctctacctttttattct---------c-agcatctagttcaatgt----cacacacacacaaagat--gctttacaaatgtctgttgaCAAATCAGCTAAATGGCATGGTTT-GCTGATGTCTAACTGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009400 140 - 192460366 ATACCCTGGGAATAATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGT----CACACACACACAAAGAT--GCTTTACAAATGTCTGTTGACAAATCAGCTAAATGGCATGGCTT-ACTGATGTCTAACTGTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121641 140 - 17224310 ATACCCTGGGAATAATGTTAATCTTTCTCTACctttttattct---------c-agcatctagttcaatgt----cacacacacacaaagat--gctttacaaatgtctgttgaCAAATCAGCTAAATGGCATGGCTT-GCTGATGTCTAACTGTTG i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433540 140 - 41321030 ATACCCTGGGAATAATGTTAAtctttctctacctttttattct---------c-agcatctagttcaatgt----cacacacacacaaagat--gctttacaaatgtctgttgataaatCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTTG i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505110 140 - 101219884 ATACCCTGGGAATAATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGT----CACACACACACAAAGGT--GCTTTACAAATGTCTGTTGACAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTCG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 890950 140 - 924385 ATACCCTGGGAATAATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGT----CACACACACACAAAGAT--GCTTTACAAATGTCTGTTGATAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTTG i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6731975 140 - 10587913 ataccttgggaataatgttaatctttctctacctttttattct---------c-agcatctagttcaatgt----cacacacacaaagagat--gctttacaaatgtctgttgaCAAATCAGGTAAATGGCATGGCTT-ACTGATGTCTAACTGTCG i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46066863 138 - 98464013 ATATTCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgc------cacacacacaaagat--gcttcataaatgtctgttgaCAAATCAGATGAATGGCATGATTT-ACTGATGTCTAACAGTCG i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551570 144 - 2763108 ATACTCTaggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatatcacacacacacacacaaagat--gcttcataaatgtctgttgaCAAATCAGATAAATGGCATGACTT-ACTGATGTCTAATTGTCA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 275981 139 - 4835464 ATACTCTGggaatcatgttaatctttctctacctttttattct---------c-agcatctagttcaatgt------cacacacacaaagat--gcttcataaatgtctgttgaCAACTCACATAAATGGCATGACTTAACTGATGTCTAACTGTCG i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3741910 140 + 4093027 ATACTCTGGGAATCATGTTAATCTTTCTCTACCTTTTTATTCT---------C-AGCATCTAGTTCAATGC----CACACACACATAAAGAT--GCTTCATAAATGTCTATTGACAAATCAGATAAATGGCATGACTT-ACTGATGTCTAACTGTCG i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078475 132 + 30473821 ATACTCCGAG-ATCTTGTTAACTTTTTTTT---TTTTAATTCT---------C-AGCTCCTAGTATAATGC--------TAAACACAAACAC--ACACTATAAATTTTTATTGACTAAACAGATAAATCTCATGGTTT-AGTAATGTCTAACTGTCG i otoGar3.GL873534 C 0 I 185 s canFam3.chr20 16613214 142 + 58134056 ATGAGCCACG-ATCAtgttaatttttctctgcattttgttttt---------caagcacctaatacaatgc----tagacacacaaaaatataagcttaataaatatttattgactaaatagatAAATGGCATGGCTT-ACTGATGTTTGACTATCT i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1868354 147 - 2187301 GACCCTCCAGAATTGTGTTAAT-TTTCTCTACATTTTTTTTTTTTTAatctcc-agcacatagtacaatgc----cagacaca-aaaaagat--gcttagcaaatattcattgaCTAGACTGATGAATGTCATGGCTC-ACTGAAGTCTGACTGACT i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=366970.000000 s hg38.chr14_KI270725v1_random 17167 43 + 172810 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCACTGAG-----------------------------------------------AGCAAAAAGAAAGC s panTro5.chr3 202011713 43 - 202621043 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCACTGAG-----------------------------------------------AGCAAAAAGAAAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779738 43 - 205426864 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCACTGAG-----------------------------------------------AGCAAAAAGAAAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9719 43 - 17846 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCACTGAC-----------------------------------------------AGCAAAAAGAAAGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596459 43 + 86207423 AAATAGTT-------------------ATCACT-----------------------CATGGAC--------------------CCACTGAG-----------------------------------------------AGCAAAAAGAAAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077692 43 + 204787373 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCATTGAG-----------------------------------------------AGCAAAAAGTAAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009540 43 - 192460366 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCATTGAG-----------------------------------------------AGCAAAAAGTAAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121781 43 - 17224310 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCATTGAG-----------------------------------------------AGCAAAAAGTAAGC i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433680 43 - 41321030 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCACTGAG-----------------------------------------------AGCAAAAAGTAAGC i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505250 43 - 101219884 AGATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCATTGAG-----------------------------------------------AGCAAAAAGTAAGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891090 43 - 924385 AAATAGTT-------------------ATCACT-----------------------CATGGGC--------------------CCATTGAG-----------------------------------------------AGCAAAAAGTAAGC i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732115 43 - 10587913 AGATAGTT-------------------ATCACT-----------------------CATGGTC--------------------CCATTGAG-----------------------------------------------AGCAAAAAGTAAGC i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067001 43 - 98464013 AGATTGTT-------------------ATAACT-----------------------CATGGGC--------------------CCATTAAG-----------------------------------------------AGCAAAAAGAAAAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551714 43 - 2763108 AGATTATT-------------------ATAACT-----------------------CATGGGC--------------------CCATTAAG-----------------------------------------------AGCAAAAAGAAAAC i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276120 43 - 4835464 AGATTGTT-------------------ATAACT-----------------------CATGGGC--------------------CCATTAAG-----------------------------------------------AGCAAAAAGAAAAC i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742050 43 + 4093027 AGATTATT-------------------AGAACT-----------------------CATGCGC--------------------CCATTAAG-----------------------------------------------AGCAAAAAGAAAAC i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078792 132 + 30473821 agatacttgggaggctgaggcaagagaatcgcttgagctcaagagtttgaggtttctgtgggctgtgaggccaccaccgcactctactgag----------------ggtgac-atagtgagat---tgtgtctcaaaagaaaagaaaaaGC i otoGar3.GL873534 I 185 C 0 s canFam3.chr20 16613356 101 + 58134056 AAATTGTT-------------------ATCACT-----------------------CTTGGAT---------ACCAATAAAATCCATTAAGAACAACAGTGCTGTGTGCCAACTATATTCAAATAAAAAAATTAAAAGAGCAAAAGGAAAGG i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868501 37 - 2187301 GGAATATA-------------------ATCACT-----------------------ACTGGAT--------------------CCATTAAG-----------------------------------------------GAAAAATC------ i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e mm10.chr6 45784614 373 - 149736546 I a score=2179285.000000 s hg38.chr14_KI270725v1_random 17210 213 + 172810 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGTTTTTACTGACTTGGTTTTAGGATATATCTACACATAGAGAAGGGTTC-----GGACAATTA-TAGTTA----GC----------AAATCAAGCAACAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCA----GTTTTTCCATAAAAATGGCATGCAT----CAGCCAGGTAAA s panTro5.chr3 202011756 218 - 202621043 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGTTTTTACTGACTTGGTTTTAGGATATATCTACACATAGAGAAGGGTTC-----AGACAATAATTAGTTA----GC----------AAGTCAAGCAAAAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAGTTGGTTTTTCCATAAAAATGGCATGCAT----CAGCAAGGTAAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779781 218 - 205426864 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGTTTTTACTGACTTGGTTTTAGGATATATCTACACATAGAGAAGGGTTC-----AGACAATAATTAGTTA----GC----------AAGTCAAGCAAAAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAGTTTGTTTTTCCATAAAAATGGCATGCAT----CAGCAAGGTAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9762 216 - 17846 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGTTTTTACTGACTTGGTTTTAGGATATATCTACACATA-AGAAGGGTTC-----GGACAATTA-TAGTTA----GC----------AAGTCAAGCAACAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAGTTTGTTTTTCCATAAAAATGGCATGCAT----CAGCAAGGTAAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596502 217 + 86207423 TGACAAAGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGTTTTTACTGACTTGGTTATAGGATATAACTACACATGGAGAAGAGGTT-----GGACAATTA-TAGTTA----GC----------AAATCAAGCAACAACAGTGTTTCAGACACTTTG-----ATACCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCATGTAT----CAGCAAGGTAAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077735 222 + 204787373 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGCTTTTACTGACTTGGTTTTAGCATATATCTACACACGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATACAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAATGTAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009583 222 - 192460366 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGCTTTTACTGACTTGGTTTTAGCATATATCTACACACGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATACAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11121824 222 - 17224310 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGCTTTTACTGACTTGGTTTTAGCATATATCTACACACGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATACAGCCATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433723 222 - 41321030 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTCCTTTTACTGACTTGGTTTTAGCATATATCTACACATGGAGAAGAGGTCCGGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGGAAGGTAAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505293 222 - 101219884 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGCTTTTACTGACTTGGTTTTAGCATGTATCTACACATGGAGAAGAGGTCTGGTTGGACAATTA-TAGTTA----AC----------AAGTCAAGCAACAACAACGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891133 222 - 924385 TGACAATGGTAAAATAAACTCAGATAGGACTCAGAAGGACCTGCTTTTACTGACTTGGTTTTAGCATATATCTACACATGGAGAAGAGGTCCAGTTGGACAATTA-TGGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATAAAAATGGCTTGCAT----CAGCAAGGTAAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732158 218 - 10587913 TGACAATGGTAAAATAAACTC----AGGACTCAGAAGGACCTGCTTTTACTGACTTGGTTTTAGCATATCTCTATACATGGAGAAGAGGTCCGGTTGGAAAGTTA-TAGTTA----GC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATATCAAAATAATTTTCCTCACTTTAAATATAGCAATTTGTTTTTCCATCAAAATGGCTTGCAT----CAGCAAGGTAAA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067044 195 - 98464013 TGACAATTGTAAAATA------GGTAGAGCCCAGAAAAACCTTTTGTTACTGACTTGATTTTAGGATATGTCTACACATGGAGAAGGGGTT-----GGACAATTA-TATATATGTTGC----------AAGTCAAGCAACAATAAAGTTTCAGATACTTTG-----ATGCCAAAATAACTTTCCTCACTTTAAATAGAGCAATTTGTTTTTCCATAAAAATG------------------------ i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551757 195 - 2763108 TGACAATGGTAAAATA------GATAGAGCTCAGAAAAACCTTCTGTTACTGACTTGGTTTTAGGATATATCTACACATGGAGAAGGGGTT-----GGACAATTA-TATATATGTTGC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATGCCAAAATAATTTTTCTAACTTTAAATAGAGCAATTTGTTTTTCCATAAAAATG------------------------ i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276163 193 - 4835464 TGACAATGGTAAAATA------GATAGAGCTCAGAAAAACCTTTTGTTACTGACTTGGTTTTAGGATATATCTACACATGGAGAAGGGGTT-----GGACAAT---TATATATGTTGC----------AAGTCAAGCAACAACAAAGTTTCAGATAGGTTA-----ATGCCAAAATCATTTTCCTCACTTTAAATAGAGCAATTTGTTTTTCCATAAAAATG------------------------ i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742093 195 + 4093027 TGACAATGGTAGAATA------GATAGAGCTCAGAAAAACCTTTTGTTACTGACTTGGTTTTAGGATATATCTACACATGGAGAAGGGATT-----GGACAATTA-TATATATGTTTC----------AAGTCAAGCAACAACAAAGTTTCAGATACTTTG-----ATGCCAAAATAATTTTCCTCACTTTAAATAGAGCAATTTGTTTTTCCATGAAAATG------------------------ i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11078924 225 + 30473821 TGATAATGGTGAAATAAGCTCAGACAGCAATTGCAATG-CCTGTTTGTGCTGACGAGAACTTAGCATTGGTCTACACATGCAGAGATGCTA-----AGACAATTT-TAGTTA----GCTACATAGATTAGGTCAAGCAATAATAATATTTCAGATATGTAG-----ATATTGCAAGAATTTTCCTCACTTTACATACAGTA-TTTTTTTTCCCATAAAAATGCCATGCAG----CAGTAAGGTTAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45784987 177 - 149736546 TGCCATTTATAATATAAAGTCAGATAGGGTTTAAAGATGCCTGTCTTTAAAGACATCACCTTAGGCTAAATTTGCATTTGCTTAGATGGCT-----G---AATTA-TAGTTA----GT----------AA------CATAAATGAAGCT--ATATACCT------------------GTGTTGCTCAT-------------GTTTTTTTTTTCATAAAAATA---TGTGG----CATTTGAGTAAA i mm10.chr6 I 373 C 0 s canFam3.chr20 16613457 210 + 58134056 TGACAATGGTGAAATAAATGCAGATAAAATTAAGAAGTATCTGATTTTACTGCCAG------AGAATATGTCTACACAGGGAGAGT----------ATCTAATTA-TTGTTA----GC----------TATATATTAATCGATAATGTTCTAGATACTTTG-----ACACCACAATAATTTTCCTCACTTTAAATGTTGCAATTTTTATTTCCATCAAAATATCATGCATGAAGCAGCAAGGTAAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1868538 227 - 2187301 TGTAAATGGTGATATAAACTC----AGGGCTTGGAAGTAGCTGATCTTATTGGCATAGCATTAGGATATGTCTACACATAGAAAGTTGTTT-----GGAATATTA-TGGTTA----GCTACATAAATTAGGTCAGTTAGCAACAATGTTCCATATTCATAGGCTGAATGCCACAAAAAATTTCTTC-CACTCAATGCATTAATTTGTATTTCCATCAAAATATCATATGA----CAggaaagtgaa i dasNov3.JH563077 C 0 T 6982 e rhiRox1.KN296641v1 1391021 714 - 1467263 I a score=69838.000000 s hg38.chr14_KI270725v1_random 17423 17 + 172810 AAAGATACCATGTGTAT s panTro5.chr3 202011974 16 - 202621043 AAAGATACCATGTGTA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204779999 16 - 205426864 AAAGATACCATGTGTA- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9978 14 - 17846 AAAGATACCATGTG--- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596719 14 + 86207423 AAAGATACTATGTG--- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077957 17 + 204787373 AAAGATACTATGTGTAt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61009805 17 - 192460366 AAAGATACTATGTGTAt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122046 17 - 17224310 AAAGATACTATGTGTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17433945 17 - 41321030 AAAGATACTATGTGTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64505515 17 - 101219884 AAGGATACTACGCATAt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 891355 17 - 924385 AAAGATACTATGTGTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6732376 17 - 10587913 AAAGATACTATGTGTAt i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11079149 3 + 30473821 AAA-------------- i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45785164 17 - 149736546 ATTGGCACTATATGTAT i mm10.chr6 C 0 I 2031 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e dasNov3.JH563077 1868765 6982 - 2187301 T e canFam3.chr20 16613667 0 + 58134056 C e saiBol1.JH378290 2551952 0 - 2763108 C e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e calJac3.chr15 46067239 0 - 98464013 C a score=22240.000000 s hg38.chr14_KI270725v1_random 17440 10 + 172810 ATATCACTCA s rheMac8.chr2 66077974 10 + 204787373 atatctctta i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61009822 10 - 192460366 atatctctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122063 10 - 17224310 ATATCTCTCA i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17433962 10 - 41321030 ATATTTCTCA i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64505532 10 - 101219884 atatctctca i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 891372 10 - 924385 ATATTTCtca i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6732393 10 - 10587913 atatctctca i colAng1.NW_012114711v1 C 0 I 3 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e gorGor5.CYUI01007532v1 9992 0 - 17846 C e mm10.chr6 45785181 2031 - 149736546 I e dasNov3.JH563077 1868765 6982 - 2187301 T e canFam3.chr20 16613667 0 + 58134056 C e saiBol1.JH378290 2551952 0 - 2763108 C e otoGar3.GL873534 11079152 0 + 30473821 C e aotNan1.NW_018502033v1 3742288 0 + 4093027 C e cebCap1.NW_016107467v1 276356 0 - 4835464 C e calJac3.chr15 46067239 0 - 98464013 C e nomLeu3.chr21 67596733 0 + 86207423 C e panPan2.chr3 204780015 0 - 205426864 C e panTro5.chr3 202011990 0 - 202621043 C a score=-10312.000000 s hg38.chr14_KI270725v1_random 17450 12 + 172810 TGTGTATATATC s panTro5.chr3 202011990 8 - 202621043 ----TAtatatc i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780015 8 - 205426864 ----TAtatatc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 9992 8 - 17846 ----TAtatatc i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596733 8 + 86207423 ----TACAtatc i nomLeu3.chr21 C 0 C 0 s calJac3.chr15 46067239 1 - 98464013 ----------T- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551952 1 - 2763108 ----------T- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276356 1 - 4835464 ----------T- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742288 1 + 4093027 ----------T- i aotNan1.NW_018502033v1 C 0 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e mm10.chr6 45785181 2031 - 149736546 I e dasNov3.JH563077 1868765 6982 - 2187301 T e canFam3.chr20 16613667 0 + 58134056 C e otoGar3.GL873534 11079152 0 + 30473821 C e colAng1.NW_012114711v1 6732403 3 - 10587913 I e manLeu1.NW_012098965v1 891382 3 - 924385 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e macFas5.chr2 61009832 0 - 192460366 C e rheMac8.chr2 66077984 3 + 204787373 I a score=1808.000000 s hg38.chr14_KI270725v1_random 17462 2 + 172810 AT s panTro5.chr3 202011998 2 - 202621043 ac i panTro5.chr3 C 0 I 6 s panPan2.chr3 204780023 2 - 205426864 ac i panPan2.chr3 C 0 I 6 s gorGor5.CYUI01007532v1 10000 2 - 17846 ac i gorGor5.CYUI01007532v1 C 0 I 2 s nomLeu3.chr21 67596741 2 + 86207423 ac i nomLeu3.chr21 C 0 I 2 s dasNov3.JH563077 1861783 2 - 2187301 AT i dasNov3.JH563077 T 6982 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e mm10.chr6 45785181 2031 - 149736546 I e canFam3.chr20 16613667 0 + 58134056 C e saiBol1.JH378290 2551953 0 - 2763108 C e otoGar3.GL873534 11079152 0 + 30473821 C e aotNan1.NW_018502033v1 3742289 0 + 4093027 C e cebCap1.NW_016107467v1 276357 0 - 4835464 C e calJac3.chr15 46067240 0 - 98464013 C e colAng1.NW_012114711v1 6732403 3 - 10587913 I e manLeu1.NW_012098965v1 891382 3 - 924385 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e macFas5.chr2 61009832 0 - 192460366 C e rheMac8.chr2 66077984 3 + 204787373 I a score=-28760.000000 s hg38.chr14_KI270725v1_random 17464 48 + 172810 CATGCATCAGCAAGGTAAAAAAGA--TACCATGT------GTATATATCATCTTTT s gorGor5.CYUI01007532v1 10004 4 - 17846 ---------------------aga-------------------------------c i gorGor5.CYUI01007532v1 I 2 C 0 s nomLeu3.chr21 67596745 4 + 86207423 ---------------------aga-------------------------------c i nomLeu3.chr21 I 2 C 0 s macFas5.chr2 61009832 3 - 192460366 --------------------gag--------------------------------- i macFas5.chr2 C 0 C 0 s calJac3.chr15 46067240 37 - 98464013 CATGCAACAGCAAGGTAAAAAAGA--TACTATAT------GTATA----------- i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551953 37 - 2763108 CATGCAATGGCAAGGTAAAAAAGA--CACTATGT------GTATA----------- i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276357 37 - 4835464 CATGCAACAGCAATATAAAAAGGA--TACTATGT------GTATA----------- i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742289 37 + 4093027 CATGCAACAGCAAGGTAAAAAAGA--TACTATGT------GTATA----------- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079152 27 + 30473821 --------------------AAAA--TACT-TGT------GTATAGATCAGGATTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613667 24 + 58134056 -----------GAGGTAAAGAGAA--TATAATGC------GTA------------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1861785 43 - 2187301 CATATGACAGCAGGGTGAAAAGACTCTGCtatatcagtcagca------------- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e mm10.chr6 45785181 2031 - 149736546 I e colAng1.NW_012114711v1 6732403 3 - 10587913 I e manLeu1.NW_012098965v1 891382 3 - 924385 I e chlSab2.chr22 64505542 3 - 101219884 I e cerAty1.NW_012009469v1 17433972 3 - 41321030 I e macNem1.NW_012018021v1 11122073 3 - 17224310 I e rheMac8.chr2 66077984 3 + 204787373 I e panPan2.chr3 204780025 6 - 205426864 I e panTro5.chr3 202012000 6 - 202621043 I a score=2915980.000000 s hg38.chr14_KI270725v1_random 17512 266 + 172810 ttcctgcag----aaaaaagatgac----------actcaaatttggtaatttgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggagggaaataagagtttgcaggaatctggagggaaaactgtgtggagaga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaacaagtacctt s panTro5.chr3 202012006 266 - 202621043 ttgctgcag----aaaaaagatgac----------actcaaatttggtaatctgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcagggtatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggagggaaataagagtttgcaggaatctggagggaaaactgtgtggagaga-acacttgacaagaaatgtgacctctggtggggagatgcagtcagcttgga---gagaggaagccagggaaagaagtacctt i panTro5.chr3 I 6 C 0 s panPan2.chr3 204780031 266 - 205426864 ttgctgcag----aaaaaagatgac----------actcaaatttggtaatctgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcagggtatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggaggaaaataagagtttgcaggaatctggagggaaaactgtgtggagaga-acacttgacaagaaatgtgacctctggtggggagatgcagtcagcttgga---gagaggaagccagggaaacaagtacctt i panPan2.chr3 I 6 C 0 s gorGor5.CYUI01007532v1 10008 266 - 17846 ttcctgcag----aaaaaagatgac----------actcaaatttggtaatttgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctgaaaggatggagggaaataagagtttgcaggaatctggagggaaaactgtgtggagaga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaacaagtacctt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67596749 266 + 86207423 ttcctgcag----aaaaaagatgac----------actcaaatgtggtaatttgaggaatgtctaaa-----a-caagcactatttgaatagatgtgggcaggttacagg-aaaattgaaaaggaa-GGCAGTAACCTACAGAc---------------tatgcctaaaaggatggagggaaataagagtttgcaggaatctggaaggaaaactgtgtggagaga-acactttacaagaaatgtgacctctggtaggcagatgcagtcagcttggc---gagaagaagccagggaaacaagtacttt i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66077987 266 + 204787373 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaataagagtttgcgggaatctggagggtaaactgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccaggaaaacaagtacctt i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61009835 266 - 192460366 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-ggcagtaatctacagac---------------tatgactgaaaggatggagggaaataagagtttgcgggaatctggagggtaaactgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccaggaaaacaagtacctt i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122076 266 - 17224310 TTCCTGCAG----AGAAAAGATGAC----------ACTCAAATTTGGTAATTTGAGGAGTGTCTAAA-----A-CAAGCACTATTTGAATAGATGTGGGCCGGTTATAGG-AAAATTGAAAAGGAA-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaataagagtttgcgggaatctggagggtaaactgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccaggaaaacaagtacctt i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17433975 266 - 41321030 TTCCTGCAG----AGAAAAGATGAC----------ACTCAAATTTGGTAATTTGAGGAGTGTCTAAA-----A-CAAGCACTATTTGAATAGATGGGGGCAGGTTATAGG-AAAATTGAAAAGGAA-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaataagagtttgcgggaatctggagggtaaactgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaacaagtacctt i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64505545 266 - 101219884 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-ggcagtaatctacagac---------------tatgcctgaaaggatggagggaaataagagtttgcaggaatctggagggtaaactgtgtggaggga-atacttgacaagaaatgtgacctttggtgggcagatgcagtcagcttgga---gagaggaagccagggaaacaagtacctt i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 891385 266 - 924385 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAATCTACAGAc---------------tatgactgaaaggatggagggaaataagagtttgcgggaatctggagggtaaactgtgtggaggga-acactagacaagaaatgtgacctctggtgggcagatgcagtcagcttgga---gagaggaagccagggaaacaagtacctt i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6732406 266 - 10587913 ttcctgcag----agaaaagatgac----------actcaaatttggtaatttgaggagtgtctaaa-----a-caagcactatttgaatagatgtgggcaggttatagg-aaaattgaaaaggaa-GGCAGTAATCCGCAGAc---------------tatgcctgaaaggatggagggaaataagagtttgcgggaatctggagggtaaagtgtgtggaggga-acacttgacaagaaatgtgacctctggtgggcagatgcagtcagcctgga---gagaggaagccagggaaacaagtacctt i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46067277 267 - 98464013 --CCTGCCG--AAAaaaaagatgac----------actcaaatttggtaatttgagaagtgtctaaa-----a-caaggagtatttgaatggatgtgggcagattaagggaaaaattgaaaaggaa-ggcagaaacctacaggc---------------tatgcctgaaaggttggagggaaataagagtttgcaggaatctggagggaaaactgtgtggagaga-ccacttgacaagatatgtgacctctggtgggcagatgctgtcagcttgaa---gagaggaagccaggggaacaagtacctc i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2551990 270 - 2763108 --cctgcag--aaaaaaaagatgac----------actcaaatttggtaatacaatgagtatttgaatgaata-caaggagtatttgaatgaatgtgcgcagattacagg-aaaattgaaaaggaa-ggcagaaacctacaggc---------------catgcctgaaaggatggagggaaataagagtttgcaggaatctggagggaaaactgtgtgaagaga-ccacttgacaagaaatgtgacctctggtgggtagatgccatcagcttgga---gagaggaagccaggggaacaagta-ctt i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276394 267 - 4835464 --CCTGCAGAAAAAAAAAAGATGAC----------ACTCAAATTTGGTAATTTGAGAAGTGTCTAAA-----A-CAAGGAGTATTTGAATGAATGTGGGGAGATTATAGG-AAAATTGAAAAGGAA-GGCAGAAACCTACAGGT---------------CATgcctgaaaggatggagggaaataagggtttgcaggaatctggagggaaaactgtgtggagaga-ccacttgacaagagatgtgacctctggtgggcagatgccgtcagcttgga---gagaggaagccagggggacaagta-ctt i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742326 254 + 4093027 --CCTACAG--AAAAAAAAGATGAC----------ACTCAAATATGGTAATTTGAGAAGTGTCTAAA-----A-CAAGGAGTATTTGAATGGATATGGGCAGGTTATGGC-------------GAA-GGCAGAAACCTACAGGc---------------tatgcctgaaaggatggagggaaataagagtttgcaggaatctggagggaaaactgtgtggagaga-ccacttgacaagaaatgtgacctctggtgggctgatgccatcagcttgga---gagaggaagccaggggaacaagtacctt i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079179 206 + 30473821 ---TTGCAG----AAAAGAGATAAC--------ATACTCAAAATTAATAACATGAGGAGTGT-TGAA-----A-CTGAGATGATTTAAACAGATACG---AAGTTGTAGG-AAAACCAAAAATGAGCACCACTAACCTAAAAAC---------------TCTGCTTACAGGGATGAAGGGGA--AAGAGTTTATGGAAGCCTggagagactgctgtgtggagagg-ccgcctagcaggagg-gtgacct--------------------------------------------------------tg i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16613691 268 + 58134056 -TCACTcag----aagac-----at----------actcaaaattagtcatctaagaagagtctaaa-----agcagaaactcttttaa-aggtgtgggcaacttgtagc-aaaatcagaaggggt-gccagtacccaaaaggcagtgtgttaccaggatatgaatgaaagggtgcagggagaaaagagtttacag-aacctggagggacagctctgtggagaggcccacgtggcaggaagtatgatctttgatggaaggata----cagGATGTA---AGAAGGAAGCCAGAGAAATA---ATCTT i canFam3.chr20 C 0 I 1 s dasNov3.JH563077 1861828 261 - 2187301 ttccagcag----gaaaaagatggcaagatgacatattcagattgagtaaactgaggtgattctaaa-----a-caaaca-----------------agtaagttgtagg-gaaatcacaagggga-accaatattctaaagacactgtct--------tatgcctgaagaaatgagggaagagaaaagtcc-ctggaaactggagttagaggtgtgtagagagg---agctaacaagagctgtgaccttgggtggagat-tacagtca---tggaattaggaggacaccaagagaataaataAAT- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I e mm10.chr6 45785181 2031 - 149736546 I a score=120944.000000 s hg38.chr14_KI270725v1_random 17778 10 + 172810 acttctctct s panTro5.chr3 202012272 10 - 202621043 acttctctct i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780297 10 - 205426864 acttctctct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10274 10 - 17846 acttctctct i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597015 10 + 86207423 acttctctct i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078253 10 + 204787373 acttctctct i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61010101 10 - 192460366 acttctctct i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11122342 10 - 17224310 acttctctct i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17434241 10 - 41321030 acttctctct i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64505811 10 - 101219884 acttctctct i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 891651 10 - 924385 acttctctct i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6732672 10 - 10587913 acttctctct i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46067544 10 - 98464013 acccctctct i calJac3.chr15 C 0 I 1 s saiBol1.JH378290 2552260 10 - 2763108 atccctctct i saiBol1.JH378290 C 0 I 1 s cebCap1.NW_016107467v1 276661 10 - 4835464 acccctctct i cebCap1.NW_016107467v1 C 0 I 1 s aotNan1.NW_018502033v1 3742580 10 + 4093027 atccctctct i aotNan1.NW_018502033v1 C 0 I 1 s otoGar3.GL873534 11079385 10 + 30473821 acttctctct i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787212 10 - 149736546 ATTTATCTCC i mm10.chr6 I 2031 C 0 s canFam3.chr20 16613960 9 + 58134056 ACTTCACTT- i canFam3.chr20 I 1 C 0 s dasNov3.JH563077 1862089 7 - 2187301 ACTTCTC--- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391021 714 - 1467263 I a score=14972.000000 s hg38.chr14_KI270725v1_random 17788 1 + 172810 t s panTro5.chr3 202012282 1 - 202621043 t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780307 1 - 205426864 t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10284 1 - 17846 t i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597025 1 + 86207423 t i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078264 1 + 204787373 t i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61010112 1 - 192460366 t i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11122353 1 - 17224310 t i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17434252 1 - 41321030 t i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64505822 1 - 101219884 t i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 891662 1 - 924385 t i manLeu1.NW_012098965v1 I 1 C 0 s colAng1.NW_012114711v1 6732682 1 - 10587913 t i colAng1.NW_012114711v1 C 0 I 1 s rhiRox1.KN296641v1 1391735 1 - 1467263 t i rhiRox1.KN296641v1 I 714 I 228 s calJac3.chr15 46067555 1 - 98464013 t i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2552271 1 - 2763108 t i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 276672 1 - 4835464 t i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3742591 1 + 4093027 t i aotNan1.NW_018502033v1 I 1 C 0 s otoGar3.GL873534 11079395 1 + 30473821 t i otoGar3.GL873534 C 0 I 1 s mm10.chr6 45787222 1 - 149736546 T i mm10.chr6 C 0 C 0 s canFam3.chr20 16613969 1 + 58134056 C i canFam3.chr20 C 0 C 0 e dasNov3.JH563077 1862096 0 - 2187301 C a score=2506009.000000 s hg38.chr14_KI270725v1_random 17789 225 + 172810 cctcagataccttttcctgccatcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactctaagttagaattcacacacgtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtcG---AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagctaca s panTro5.chr3 202012283 225 - 202621043 cctcagataccttttcctgccctcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactccaagttagaactcacacacgtcagtttcatgaacac-agagcagggtagggaagcctgaag--agtaattt--------------ggaagagcaaaggaaagatgtcG---AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagctaca i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780308 225 - 205426864 cctcagataccttttcctgccctcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactccaagttagaactcacacacgtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtcG---AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagctaca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10285 224 - 17846 cctcagataccttttcctgccgtcattcctccagaagtttctcttgacagccaaacaaccaggag-cagtagaaagaaaactccaagttagaactcacacacgtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatGACG---AATGCATAAAgtcaactaagtttgggaaacattgggttaaacaaagctaca i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597026 225 + 86207423 cctcagataccttttcctgccctcattcctccagaagtttctcttgacagccaaacaaccaggagccagtagaaagaaaactccaagttagaactcacacacgtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagatcaaaggaaagatgtcG---AATGCATAAAgtccactaagtttgggaaacattgggttaaacaaagttaca i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078265 225 + 204787373 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaagctcaagttagaactcacacaggtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtTG---AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61010113 225 - 192460366 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagcaggaaggaaagcccaagttagaactcacacaggtcagtttcaagaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtTG---AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11122354 225 - 17224310 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaagcccaagttagaactcacacaggtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtTG---AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17434253 225 - 41321030 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgttg---aatacaTTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64505823 224 - 101219884 cctcagaggccttttcctgccctccttcctccagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttcatgaacac-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtTG---AATGCATTAAGTTCACtaagttt-ggaaacattgggttaaacaaagctaca i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 891663 225 - 924385 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccaggagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttcatgaaccc-agagcagggtagggaaggctgaag--agtaattt--------------ggaagagcaaaggaaagatgtTG---AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6732684 227 - 10587913 cctcagatgccttttcctgccctccttccttcagaagtttctcttgatagtcaaacaaccagaagccagtaggaaggaaaccccaagttagaactcacacaggtcagtttcatgaacac-agagcagggtagggaaggctgaagttcgtaattt--------------ggaagagcaaaggaaagatgtTG---AATGCATTAAgtccactaagtttgggaaacattgggttaaacaaagctaca i colAng1.NW_012114711v1 I 1 C 0 s calJac3.chr15 46067556 225 - 98464013 tcttagattccttttcctgccctccttcctccagaagtttctcttgatagccagacaaccagaagccagtagaaaggaaaccccatgttagaactcacacaggtcagttccatgaacac-agagcagggtaaggaagactgaag--agtaattt--------------ggaagagcaaaggaaagatgcct---aatgcaTCAAGTGCACtaaatttgggaaacattgggttaaacaaagctaca i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552272 225 - 2763108 ccttagattcctcttcctgccctccttcctccagaagtttctctttatagccgaacaaccaggagccagtagaaaggaaaccccatgttagaactcacacagatcagttccatgaacac-agagcagtgtaaggaagactgaag--agtaattt--------------ggaagagcaaagaaaagatGCCT---AATGCATCAAgtccactaaatttgggaaacattgggttaagcaaagctaca i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276673 223 - 4835464 ccttagattccttttcctgccttccttcctccagaattttctcttgatagccaaacaaccaggagccagtagaaaggaaaccccatgttagaacctacacaggtcagttccatgaacac---agcagggtaaggaagactgaag--agtaattt--------------ggaagagcaaaggaaagatgcct---aatgcaTTAAgtccactaaatttgggaaacattgggttaaacaaagctaca i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742592 225 + 4093027 ccttagattccttttcctgccctccttcctccagaagtttctcttgatagccaaacaaccaggagccagtagaaaggaaaccccatgttagaactcacacaggtcagttccatgaacac-agagcagggtaaggaagactgaag--agtaattt--------------ggaagagcaaaggaaagatgcct---aatacaTCAAGTTCACtaaatttgggaaacattgggttaaacaaagctaca i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079397 179 + 30473821 cctc--ataccttctttcttcctccttcccacaaagagttctcttcctagccaaacaaccagaagccagtggaaaggaagACC-------------------------------------------------AGAAGGCTGAGG--AATGATATTTTAGGGGGGGAAGGAGAGTGCAAAGGaaaggctttg-------------gtctaataagttagagaaacattggatttaacaaaactaca i otoGar3.GL873534 I 1 C 0 s mm10.chr6 45787223 189 - 149736546 CCTCAAAAATTTTTTCCTCCCCTCC-ACTTCCAGAGACTT-TTTTCATTACCAAACAGTTAGATGCCTACAGAAGGGAAACTCAGGGT-------------------GTTCA----------AGCAGGG-AGAGATTGTTGAAT--AGAGATTG--------------TAGATAG-AAAGAAAAAACACTC---TACATATAAGGTCAACTAGATCTGAGAAACAGAAGGGTACAGCTAGC---- i mm10.chr6 C 0 C 0 s canFam3.chr20 16613970 194 + 58134056 CCTCAAAC-CCTTCTCCCTCCCTCCTTTCTCCAGAGGGTGCTCAGCACTACTACAATACTACAAGTCAGTAGAAGGGAAACCCAATGTTATAACCCATCCAGGGTAGCTCCATGAATAC-AGAGGTGGA------------AAA--ATAAACCT--------------GGAGGGGCAAAGGAAAGATGATAGCTAATGCATAAGGTCAATGAACTTTGAGaaac--------------------- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862096 136 - 2187301 ---CATATACTTTTTCCCTccc-------------------------------aataa------------------------------tacaaaccatgcaggtcaattcc-tgaacacaaaagccaggtggagaaatttgaag--aat-atct--------------ggaggagcaaagaaaagatatcc---aacaca--AAGTCACCTAAGTTTGGGAAA---------------------- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391736 228 - 1467263 I a score=30133.000000 s hg38.chr14_KI270725v1_random 18014 2 + 172810 ta s panTro5.chr3 202012508 2 - 202621043 ta i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780533 2 - 205426864 ta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10509 2 - 17846 ta i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597251 2 + 86207423 ta i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078493 2 + 204787373 ta i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61010341 2 - 192460366 ta i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11122582 2 - 17224310 ta i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17434481 2 - 41321030 ta i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64506050 2 - 101219884 ta i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 891891 2 - 924385 ta i manLeu1.NW_012098965v1 I 3 C 0 s colAng1.NW_012114711v1 6732911 2 - 10587913 ta i colAng1.NW_012114711v1 C 0 I 3 s rhiRox1.KN296641v1 1391964 2 - 1467263 ta i rhiRox1.KN296641v1 I 228 I 287 s calJac3.chr15 46067781 2 - 98464013 ta i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552497 2 - 2763108 ta i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 276896 2 - 4835464 ta i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3742817 2 + 4093027 ta i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079576 2 + 30473821 ta i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16614164 1 + 58134056 -a i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862232 1 - 2187301 -A i dasNov3.JH563077 C 0 C 0 e mm10.chr6 45787412 0 - 149736546 C a score=3218386.000000 s hg38.chr14_KI270725v1_random 18016 290 + 172810 attttcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactacaactctccaggaagagggaaaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaacacc-----ttaacagactct----tgtcc----catgtgac------acactC--TAACATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GGTGTCTTAATTGGTAGAATTAGTATATTCCATTTCTCTAGC s panTro5.chr3 202012510 290 - 202621043 attctcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactctccaggaagagggaaaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaacacc-----ttaacagactct----tgtcc----catgtgac------acactc--tAACATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GGTGTCTTAACTGGTAGAATTCATATATTCCATTTCTCTAGC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780535 290 - 205426864 attttcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactctccaggaagagggaaaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaacacc-----ttaacagactct----tgtcc----catatgac------acactc--tAACATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GTTGTCTTAATTGGTAGAATTCATATATTCCATTTCTCTAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10511 287 - 17846 attttcttttctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactc-ccaggaagagggaaaaaatgtgccaagcatgccaaatg--tt---taatcacacaacctcccattcttgt------agaacacc-----ttaacagactc-----tgtcc----catgtgac------acactC--TAACATTTTCCAATGTTAGTATCTTGTAAATATTCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAGAGTT-GGTGT-TTAATTGGTAGAATTCGTATATTCCATTTCTCTAGC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597253 293 + 86207423 attttcttctctgcagga---tttctcagatcctttaaatgtgaatgcaaactataactctccaggaagagggagaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaacacc-----ttaacagacttt----tgtcc----catgtgac------acactctTTAACATTTTCCAATGTTAGTATCTTGTAAATATGCAGGGTCAACCCATCATACCCCAAGTATTAAATTAATTTTGCCTGAAAAGTTGGGTGTCTTAATTGGTAGAATTCATATATTCCATTTCTCTAGC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078495 286 + 204787373 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactcctcaggaagagggagaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaattcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaaTATTAGTATATTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTGTTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i rheMac8.chr2 C 0 I 2 s macFas5.chr2 61010343 286 - 192460366 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactcctcaggaagagggagaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaattcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaaTATTAGTATATTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i macFas5.chr2 C 0 I 2 s macNem1.NW_012018021v1 11122584 286 - 17224310 attttcttttctgcagga---tttctcagatccttttaatgtgaataaaaactataactcctcaggaagagggagaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaattcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaaTATTAGTATATTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i macNem1.NW_012018021v1 C 0 I 2 s cerAty1.NW_012009469v1 17434483 286 - 41321030 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactccccaagaagagggagaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaattcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaatgttAGTATCTTGTAAATATTCAAGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i cerAty1.NW_012009469v1 C 0 I 2 s chlSab2.chr22 64506052 286 - 101219884 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactccccaggaagaaggagaaaaggtgccaagaatgccaaatg--tt---taaccacacaacctcccattcttgt------agaactcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaatgttAGTATCTTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-AGTGGCTTAATTGATAGAATTCACATATTCCATTTCTCTAGC i chlSab2.chr22 C 0 I 2 s manLeu1.NW_012098965v1 891893 286 - 924385 attttcttttctgcagga---tttctcagatcctttaaatgtgaataaaaactataactccccaggaagagggagaaaatgtgccaagcatgccaaatg--tt---taaccacacaacctcccattcttgt------agaattcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaatgttAGTATCTTGTAAATATTCAGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCATTTCTCTAGC i manLeu1.NW_012098965v1 C 0 I 2 s colAng1.NW_012114711v1 6732916 286 - 10587913 attttcttttctgcagga---tttctcagatcctttaaatatgaatacaaactataactccccaggaagagggagaaaatgtgccaagcatgccaaatg--tt---taatcacacaacctcccattcttgt------agaactcc-----ttaacagactct----tgtcc----catgtggc------acactc--t----ttggaaaatgttAGTATCTTGTAAATATTCGGGGTCAACCCATCTTACCCCAAGTATTAAATTAATTTTGTCTGAAGAGAT-GGTGGCTTAATTGGTAGAATTCACATATTCCGTTTCTCTAGC i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46067783 286 - 98464013 attttcttttctgcagga---tttctcagatcctttaaatgtgagtacaaatcataactctcccaaaagagggagaaaatgtgccaaccatgacaaatg--tt---taaccacacaacctcccgttcttgt------agaacccc-----ttaacagacttt----tgtgc----catgtaac------acactc--t----ttaaaaaacgttgTTGTCTTGTAAATATTCAGGGTCAACCCATGTTACTCCAAGTATTACATTAATTTTTCCTGAAGAGAT-GCTGTCTTAATTGGTAGAATTCATATATTCCATTTCACTAGC i calJac3.chr15 C 0 I 2 s saiBol1.JH378290 2552499 286 - 2763108 attttcttttctgcagta---tttctcagatcctttaaatgtgaatgcaaatcataactctccccaaagagggagaaaatgtgccaagcacgacaaatg--tt---taaccatataacctcccgttcttgt------agaacacc-----ttaacagacttt----tgtcc----catgtgac------acactc--t----ttgaaaaacgttgTTGTCTTGTAAATATTCGGGGTCAACCCATGTTACTCCAAGTATTAAATTAATTTTGCCTGAAGAGAT-GCTGTCTTAATTGGTAGAATTCATATATTCCATTTCACTAGC i saiBol1.JH378290 C 0 I 2 s cebCap1.NW_016107467v1 276898 286 - 4835464 attttcttttctgcagga---tttctcagatcctttaaatgtgagtgcaaatcataaccctcccgaaagagggagaaaatgtgccaatcatgacaaatg--tt---taaccacacaacctcccgttcttgt------agaacacc-----ttaacagacttt----tgtcc----catgtggg------acactc--t----gtgaaaaatgctgTTGTCTTGTAAATATTCAGGGTCAACCCATGTTACTCCAAGTATTAAATTAGTTTTGCCTGAAGAGAG-GCTGTCTTTATTGGTAGATTTCATATATTCCATTTCACTAGC i cebCap1.NW_016107467v1 C 0 I 2 s aotNan1.NW_018502033v1 3742819 286 + 4093027 attttcttttctgcagga---tttctcagatcctttaaatgtgggtgcaaatcataactctcccaaaagagggagaaaatgtgccaagcatgacaaatg--tt---taaccacacaacctcccgttcttgt------agaacacc-----ttaatagacctt----tgtcc----catgtgac------acactc--t----ttgaaaaatgttgTTGTCTTGTAAATATTCAGGGTCAACCCATGTTACTCCAAGTATTAAATTAATTTTGCCTGAAGAGAT-GCTGTCTTAATTGGTAGAATTCATATATTCCATTTCATTAGC i aotNan1.NW_018502033v1 C 0 I 2 s otoGar3.GL873534 11079578 310 + 30473821 attttctctgctgcaggatattttctcagatccttgaaatgcgaacacaattgatgattctctaggaggagagagaaaatgtgccaggcacgtccaatgtatt---taaccacacaacttcctgttctcGT--CCACACAACTTCCTGTTCTGAAAGATTAA----TTTGCAGAACATTTAGCCTCACAACACAC--T----TCAGAAAACGTTGGTCCCTCCTAAATATCCAGGGTCCACTAGTTTCACCTCAAGTATTAAATTAGTTTTGCCCCAAAAGAT-GCTTTCTTAATTGGCAGAATTCTTGTATTCCATTTCTCTAGC i otoGar3.GL873534 C 0 I 2 s mm10.chr6 45787412 271 - 149736546 -------------AAGGA---CCTCTCAACTTTTTTT-ATGCCAGTGTAAATTATGATTGTCTAGCTTAAGTGTGAAGAAGTACAAGGCACTCC--ATG--CTCACTGAACCCTGAATTCCATGTTTTGGT------AGAACTT------TTAAGAGAGGTG----TTTCC----TGTGTCAC------AACTTT--T----AAAAAAAATGGTGGCTTCTCATGACTTCTATTGATCAAGCAACTTTACTAAACTTTTCGAACTAATATCCCCTAAAATAAT-GTTGTCTTCATGTATAGTCTTAATAT-TCATGTCTCTGCAAC i mm10.chr6 C 0 I 2 s canFam3.chr20 16614165 253 + 58134056 attttccatactgcagga---tttctcacagccttgaaatgctaatatgaattatgactc----------------AGATGT------------AATTA--TT--------ACAGAATCTCTGTTCTTAAA------AAAACACC-----TTG--AGACTAGGAAATGCCC----CTTGAGTG------ACACTT--T------GGAAAATGGCAGATTCTCATAAATATCAAGAGTTAACCAATGTTACCTCAAGTATCAAATTAATTTTGCCTGGAGAGAT-GCTATTTTAATTGGAATGGTTCATATAGTCCACCTCCCTGAA i canFam3.chr20 C 0 I 2 s dasNov3.JH563077 1862233 265 - 2187301 ACTTAtctttctggagga---tttatcagggcctttaaatgctaatgtggattataacttaccag-----------tggtgtgccaaccatgccgaatatttt---taactatagaaccttctgttcttgttttcatggaacacc-----ttgagtgactaa----tggcc----catggaac------acactt--t------gggaaatgttAAC-TACTGTCAAGAGTCA--ACCAACCAATGGTACCTTATAGATCAAATTAATTTTTCCTGAGTTCAT-GCAGTT-----------AGTTCACATAACCCCCTGCACTG-- i dasNov3.JH563077 C 0 C 0 e rhiRox1.KN296641v1 1391966 287 - 1467263 I a score=34675.000000 s hg38.chr14_KI270725v1_random 18306 2 + 172810 CC s panTro5.chr3 202012800 2 - 202621043 CC i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780825 2 - 205426864 TC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10798 2 - 17846 CC i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597546 2 + 86207423 CC i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078783 2 + 204787373 CC i rheMac8.chr2 I 2 C 0 s macFas5.chr2 61010631 2 - 192460366 CC i macFas5.chr2 I 2 C 0 s macNem1.NW_012018021v1 11122872 2 - 17224310 CC i macNem1.NW_012018021v1 I 2 C 0 s cerAty1.NW_012009469v1 17434771 2 - 41321030 CC i cerAty1.NW_012009469v1 I 2 C 0 s chlSab2.chr22 64506340 2 - 101219884 CC i chlSab2.chr22 I 2 C 0 s manLeu1.NW_012098965v1 892181 2 - 924385 CC i manLeu1.NW_012098965v1 I 2 C 0 s colAng1.NW_012114711v1 6733202 2 - 10587913 CC i colAng1.NW_012114711v1 C 0 I 2 s rhiRox1.KN296641v1 1392253 2 - 1467263 CC i rhiRox1.KN296641v1 I 287 N 0 s calJac3.chr15 46068071 2 - 98464013 CC i calJac3.chr15 I 2 C 0 s saiBol1.JH378290 2552787 2 - 2763108 CC i saiBol1.JH378290 I 2 C 0 s cebCap1.NW_016107467v1 277186 2 - 4835464 CC i cebCap1.NW_016107467v1 I 2 C 0 s aotNan1.NW_018502033v1 3743107 2 + 4093027 CC i aotNan1.NW_018502033v1 I 2 C 0 s otoGar3.GL873534 11079890 2 + 30473821 CC i otoGar3.GL873534 I 2 C 0 s mm10.chr6 45787685 2 - 149736546 TC i mm10.chr6 I 2 C 0 s canFam3.chr20 16614420 2 + 58134056 CC i canFam3.chr20 I 2 C 0 s dasNov3.JH563077 1862498 1 - 2187301 -C i dasNov3.JH563077 C 0 C 0 a score=906618.000000 s hg38.chr14_KI270725v1_random 18308 73 + 172810 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATCGGCAGATAA s panTro5.chr3 202012802 73 - 202621043 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATCGGCAGATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780827 73 - 205426864 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATCGGCAGATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10800 73 - 17846 AAATTGTAGAACTTTCAGAGCTTCAAATAACTCTGGGCATTCCTCTACTCTGATGGGTTCAATCGGCAGATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597548 73 + 86207423 Aaattgtagaactttcagagcttcacataatcctgggcattcctctactctgatgggttcaattggcagataa i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078785 73 + 204787373 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATTGGCAGATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010633 73 - 192460366 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATTGGCAGATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122874 73 - 17224310 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATTGGCAGATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434773 73 - 41321030 AAATTGTAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATTGGCAGATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506342 73 - 101219884 AAATTATAGAACTTTCAGAGCTTCAAATAATTCTGGGCATTCCTCTACTCTGATGGGTTCAATTGGCAGATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892183 73 - 924385 Aaattgtagaactttcagagcttcaaataattctgggcattcctctactctgatgggttcaattggcagataa i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733206 73 - 10587913 Aaattgtagaactttcagagcttcaaataactctgggcattcctctactctgataggttcaattggcagataa i colAng1.NW_012114711v1 I 2 C 0 s calJac3.chr15 46068073 73 - 98464013 AAATTATAGAACTTTCAGAGCTTCAAATGATTGTGGGCATTTCTCTGCTCTAATGGGTTCAGCTGGCAGATCA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552789 73 - 2763108 Aaattatagaactttcagagattcaaatgatcgtggacatttctctgctctaatgggttcaattcgcagatca i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277188 73 - 4835464 AAATTGCAGAACTTTCAGAGCTTCAAATGATTGTGGGCATTTCTCTGCTCTAATGGGTTCAATTCATAGATCA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743109 73 + 4093027 AAATTATAGAACTTTCAGAGCTTCAAATGATTGTGGGCATTTCTCTGCTCTAATGGGTTCAACTGGCAGATCA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11079892 69 + 30473821 AAATTGTAGAACTTT-AGAGCTCCAAATGATTGTG--CATT-CACTGCCCTCACGGGTTCAACTGGCAGATAA i otoGar3.GL873534 C 0 I 416 s mm10.chr6 45787687 71 - 149736546 AAGCTGAAAAACTTCTACTGCGTTGAAGG--TTAGACTACTCATCCATTTGAATGTGTCCCCGAGGCAGATAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16614422 72 + 58134056 AAATTAGAGAATTCTTTGAGCCCCAAATGACTATGAACATTCAACTACTCAGACA-GTACAACTGGCAGTCAA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862499 73 - 2187301 AAGTATTAGAACTTTTAGAACTACAGATAATTATTGGTAGTCATGTACACTGACAATTCCAATTGGTAGATAA i dasNov3.JH563077 C 0 C 0 a score=3146904.000000 s hg38.chr14_KI270725v1_random 18381 273 + 172810 AATAATGAAGACATTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGCTATTCCTCTTGCACCAAAATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCCATCAGAAGCAAATAAACTTGCCCTTT s panTro5.chr3 202012875 273 - 202621043 AATAATGAAGACATTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGCTATTCCTCTTGCACCAAAATTTAGAATTTTAACATGAGTCTCTAAACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCTATCAGAAGCAAATAAATTTGCCCTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204780900 273 - 205426864 AATAATGAAGACGTTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGCTATTTCTCTTGCACCAAAATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATATAGGTAGATGGTACATCCTATTTCCCGCACTGCTAAGACA-TCCACTAGGCCTATATTACTTCCATCAGAAGCAAATACATTTGCCCTCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 10873 273 - 17846 AATAATGAAGACATTGAAAAATAAAGTGGCTTGGGCAAAAACGAGAGCTATTCCTCTTGCACCAAAATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACCATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATACAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCCATCAGAAGCAAATAAATTTGCCCTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597621 273 + 86207423 aataatgaagacattgaaaaataaagtggcttgggcaaAAACGAGAGCTATTCCTCTTGCACCAAAATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACACACAGTTAATACAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCCACTAGGCCTATATTACTTCTATCAGAAGCAAATAAATTTGCCCTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66078858 273 + 204787373 AATAATGAAGACATTGGAAAATAAAGTGGCTTGGACAAAAACGAGAGCTATTCCTCTTGCACCAAAATCTAGAATTTTAAAATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTGCCCTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010706 273 - 192460366 AATAATGAAGACATTGGAAAATAAAGTGTCTTGGGCAAAAACGAGAGCTATTCCTCTTGCACCAAAATCTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTGCCCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11122947 273 - 17224310 AATAATGAAGACATTGGAAAATAAAGTGGCTTGGACAAAAACGAGAGCTATTCCTCTTGCACCAAAATCTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTGCCCTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17434846 271 - 41321030 AATAATGAAGACATTGGAAAATAAAGTGGCTTGGACAAAAACGAGAGCTATTCCTCTTGCACCAAAATCTAGAATTTTAACATGAG--TCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGCTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCAACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTGTCCTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506415 273 - 101219884 AATAATGAAGACATTGGAAAATAAAGTGACTTGGATAAAAACGAGAGCTATTCCTCTTGCACCAAAATTTAGAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACGATGGTGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TCGACTAGGCCTATATTACTTCTATCGGAAGCAAATAAATTTTCCCTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892256 273 - 924385 aataatgaagacattggaaaataaagtggcttggacaaaaacgagagctattcctcttgcaccaaaatctagaattttaacatgagtctctagactc-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACATGATGGAGTTTTT-AAAACCAGATTCAGAAATTAATGCACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TGGACTAGCCCTATATTACTTCTATCGGAAGCAAATAAATTTGCCCTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733279 273 - 10587913 aataatgaagacattggaaaataaagtggcttggacaaAAACGAAAGCTATTTCTCTTGCACCAAAATTTACAATTTTAACATGAGTCTCTAGACTC-GGTCTTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACGATGGAGTTTTT-AAAACCAGATTCAGATATTAATACACAAACAGTTAATATAGGTAGATGGTACATCCTATTTTCTGCACTGCTAAGATA-TTGACTAGGCCTATATTACTTCTATCGGAAGCAAATAAATTTGCCCTTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068146 263 - 98464013 AATAATGAAGACATTGAAAAATAAAATGGCTTAGTCAAAAAGAAGAGCTAGGGCCCTTACATCAAAATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTTCTACAACTTTCC---A-----AACT---ATCA--TGTTTAGAATACAAT----TTTTT-CAAACCAGATTCAGAAATTA------ATATAGTTAATATAGGTAGATGGTACACCCTATTTTCTGCACTGCTAAGATT-TTGACTAGGCCTATATTACTTCTGTGGGAAGCAAATGAATTTGCCCTTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2552862 268 - 2763108 aataatgaagacattgaaaaataaaatggcttagtcaaAAAGAAGAGCTATGCCCCTTACATCAAAATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTCCTACAACTTTCC---A-----AACT---ATCC--GGTTTAGAACACAG-----TTTTT-CAAACCAGATTCAGAAATTAAGGCACACACAGTTAATATAGGCAGATGGTATACCCTGTTTTCTGCACTGCTAAGATT-TTGACCAGGCCTATATTATTTCTATGGGAGGCAAATGAATTTGCCCTTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277261 269 - 4835464 AATAATAAAGACATTGAAAAATAATCTGGCTTAGTCAAAAAAAGGAGCTAGGCCCCTTACATCAAAATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTCCTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAGCACAAT----TTTTT-CAAACCAGATTCAGAAATTAAGGAACACATAGTTAATATAGGCAGATGGTACACCCTATTTTCTGCACTGCTAAGATT-TTGACTAGGCCTATATTACTTCTATGGGAAGCAAATGAATTTTCCCTTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743182 269 + 4093027 AATAATGAAGACATTGAAAAATAAAATGGCTTAGTCAAAAAGAAGAGCTAGGTCTCTTACATCAAAATTTAGAATTTTAACATGAGTCTCTAGACTT-GGTCCTACAACTTTCC---A-----AACT---ATCA--GGTTTAGAACACAAT----TTTTT-CAAACCAGATTCAGAAATTAAGGCACACACAGTTAACATAGGCAGATGATGCACCCTATTTTCTGCACTGCTAAGATT-TTGACTAGGCCTATATTACTTCTATGGGAAGCAAATGAATTTGCCCTTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11080377 256 + 30473821 aataaCAGTGGCAATGGGACATGAAATGGCCTGACCAAAAGC-AGAGTTGGTTCTTTCACACCAA---------------------TCCCCAGACTT-GGTCTTACCAATTCCCTCTA-----GTTTGTAATCA--AGTTTAGACCACTACAGAGTTTTT--AAACCAGTTCCAGAGATGAATGCACATATAGTCCGTATAGGTAGATTCTATCCGCTATTCTCCGCACTGGTAAGACT-TTGACTAGGCCTATATTACTTCTACAGCAAGTAAACACATTCGCCTTTT i otoGar3.GL873534 I 416 C 0 s mm10.chr6 45787758 230 - 149736546 AACAATGC--ACTTGGAGCAATGTAGCGG-TAAGACCGAAACATGCACAGTACCCATTCCAAC--------------------------CTCCACTCAGGGCATCCCACTCTCC----------ACT---AGTACTGATTCAG--------------TTT-AGGATAAAATCCAGAAACCAGTGCCAATGTAGTTCACACCAGTAGATATTTTATTCTTCTTGAGGTCATGCTAAGAGGCTTGTCTAGGCCTATACTACTTCTATGGGAAACACATTAGCTG--TTTTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16614494 256 + 58134056 TATAATGGAGACTTTTAGAAATGGAGACATCTGGCCAAACACCAGAGGTAATACTTTCACACCAA---------------------TCTCTAAACTT-AAACTTGCTACTTTCC---ACTTGTATTT---ATCA--AGTGTAGAACACTGTGGAGTTTTT-AAAACTAGATGCAGAAACTAATACATACATAGTTCACGCAGGTAGATGGC-CATCCCATTTGCCTCACTGCAAAGATT-TTGACTAGGCCTATATTACTTCTATTAGAAGCAAATGAATTTGCCCTTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1862572 244 - 2187301 CAGAATGGAGGCTTTCAGAAAGGAAATGACCTG-------ACAGAAACCAGTACTTTCACACC---------------------AGTCGCTAAA-TT-GGGCTGGCTACTTCCC---ACTTGTATCT---ATCA--GGTTTAGAAAAC--TGGAGTTTTTAAAAAACAGATTAAAAAACAAATACATA-----TTCAAAGAGATAGCTGGTACATCACATTTGCTTCTTTGCTAAGATTTTTGACTAGGCCCATGTTACTTTTAAGGAACACAAATGAATTTGCCCTTC i dasNov3.JH563077 C 0 I 7153 a score=807048.000000 s hg38.chr14_KI270725v1_random 18654 68 + 172810 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTTT-------TTT s panTro5.chr3 202013148 68 - 202621043 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTTT-------TTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781173 68 - 205426864 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTTT-------TTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11146 67 - 17846 TCATAACCCAAAAGTAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA-----------------TTT-------TTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597894 60 + 86207423 TCATAACCCAAAAGTAGAATTCAA--------TGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTTT-------TTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079131 68 + 204787373 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTAT-------TTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61010979 68 - 192460366 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTAT-------TTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11123220 68 - 17224310 TCAGAACTCAAAGTTAGAATTAAAGAATTTATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTAT-------TTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17435117 68 - 41321030 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTAT-------TTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64506688 68 - 101219884 TCAGAAATCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTAT-------TTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 892529 68 - 924385 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTAT-------TTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6733552 68 - 10587913 TCAGAACTCAAAGTTAGAATTAAAGAATTCATTGCCCTCAAAATTGGTTCACCCAACTTGA----------------TTGT-------TTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068409 65 - 98464013 TCTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAACTTGA------------------CT-------TTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2553130 67 - 2763108 TCTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAACTTGA----------------TTTT-------TTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 277530 67 - 4835464 ACTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAACTTGA----------------TTTT-------TTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3743451 67 + 4093027 TCTTAACTCAAAG-TAGAATTCAAGAATTCATTGCCCTCAAAATTGGTTCTTCCAACTTGA----------------TTTT-------TTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11080633 83 + 30473821 CTGTAACTCAAGG-TAGAATTCAGGAATTCGTTCCCTTCATAATTGGTTCTCCCTATTTGAtttttttttttttttttttt-------ttt i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45787988 74 - 149736546 TTGCAACTCAGAG-TAGAATTTGAGAATTCATTGCCCTCAAAATGCATTTTCTCATTTTTT----------------CTCTCACACTCTTT i mm10.chr6 C 0 C 0 s canFam3.chr20 16614750 67 + 58134056 TCACAACTCAATG-TGGAATTCAAGAATTCACTGCTCTCAAAATTGGTTCTCACAATTTGA----------------CTTT-------TTT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1869969 67 - 2187301 TCTTAACTCAATA-TAGAATTGACTATTATATGGACCTCAAAATTGGTTATCCCAATTTGA----------------TTTT-------TTC i dasNov3.JH563077 I 7153 I 206 a score=17974620.000000 s hg38.chr14_KI270725v1_random 18722 1379 + 172810 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAgtgttgtgcaagtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacagcaggcagaactgtacaaaggacagtcaccttcaactgtcacttaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCAAATATTTCCAGGCTACAGTTGCATTCGGTGTCTTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTT-CCTGGGG---TTTATATT-AGGGCCT-GGGGA-AACA--AAGTTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCCACTACAGTCCGATTCAGATTCAGATGGTCAGATTGGACTCTAAAGTGGAATTCCTAGTATAATACAGTCTTCACTT-CCT-TACAATATGGTTCC---TGG-TTTT-TTATCCTTTACATTGGCACTGTTCAAGCAGCA-CCTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGGGCA---GCTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATATATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAAGGACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGGGCAGATGTCCTGGTTCTAGCACGACATGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATTAAGAGTGTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTTTAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTTTCTACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTTTCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCT--AA-AAAAAAAGATGAA-TAACAGAGCCCAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATACTGTATGTACGTGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAATTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA s panTro5.chr3 202013216 1382 - 202621043 CT-----GTAAAACTGGGTTCTAAATAAAGTTATCAGTATATAAA-TGAACACAGAgtgttatgcaggtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcagaactgtacaaaggaaagtcaccttcaactgtcacttaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCAAATGTTTCCAGGCTACAGTTGCATTTGGTGCCTTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTTGCCTGGGG---TTTATATT-AGGGCCT-GGGGA-AACA--AAGCTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCCACTATAGACCGATTCAGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCCTAGTATAATACAGTCTTCACTT-CCT-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACGTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATATATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAAGGACTTGTCTGATTCACATCTCTACCTCACATGTAGAGGA-TTCTTTTCTC-------CCCAGTGAAA-TTTTATGGAGATTTACTATGGAGGGAAGATGTCCTGGTTCTAGCACGACGTGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGAGTGTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTTTAGCTGAAAGTACATAGTCTTCCTTGTTTCGAACATTTTCTACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTTTCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCT---A-AAAAAAAGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATACTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAGTTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204781241 1382 - 205426864 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAgtgttgtgcaggtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaatggcaggcagaactgtacaaaggaaagtcaccttcaactgtcacttaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCTAATGTTTCCAGGCTACAGTTGCATTCGGTGCCTTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTTGCCTGGGG---TTTATATT-AGGGCCT-GGGGA-AACA--AAGTTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCCACTATAGCCCAATTCAGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCCTAGTATAATACAGTCTTCACTT-CCT-TACAATGTTGTTCC---TGG-TTTT-TTATCCTTTACGTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGCCATTGAACACCTACATGCTTATATATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAAGGACTTGTCTGATTCACATCTCTACCTCACATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGGGCAGATGTCCTGGTTCTAGCACGACGTGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGAGTGTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTTTAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTTTCTACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTTTCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCT--AA-AAAAAAGGATGAA-TAACAGAGCCCAATTTGAAATGG-CATCTCTGTTACTCCA---ATTAACATACTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAATTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 11213 1381 - 17846 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAgtgttgtgcaagtgggcttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacagcaggcagaactgtacaaaggaaagtcaccttcaactgtcactcaggaagaaacaaagATATCAGGAACAGTACCA--TTTTTCCAAATGTTTCCAGGCTACAGTTGCATTCGGTGCCGTTCCAGAACAACTGAACAATGAAATGGATAGTAATCTGCCAAATGCATACAGCTGTATGCCTGTTTGCCTGGGG---TTTATATT-AGGGCCT-GGGGA-AACA--AAGTTAAGGAAGTAAGGCTGCAGGGTAGCATCAGTCCATCCACTATAGTCCGATTCAGATTCAGATGGTCAGATTGGACTCTAAAGTGGAATTCCTAGCATAATACAGTCTTCACTT-CCT-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACGTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACCCTGTGTAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATATATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTAACGACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGGGCAGATGTCCTGGTTCTAGCACGACGTGGTGGACTGGAATGGAATCAAAGATGCTCTTCCAATCTTT--TAGGTGTAAAACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGAGTGTGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTTTAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTCTCTACTTT------AT---GGCAATAG-----------ATTAAATTTAATCATGCTTTACTTCACAAA-TGTTTCTTGGTGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTACCTCT---A-AAAAAAAGATGAA-TAACAAAGCCCAATTTGAAATGGCCATCTCTGTTACTCCA---AGTAACATACTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAACTGCATTTACAATTACGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67597954 1380 + 86207423 TT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAGTGTTGTGCAGGTGGGCTTGCCCTTGGTAACAGACACAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGAACTGTACAAAGGAAAGTCACCTTCAACTCTCACTCAGGAAGAAACAAAGATATCATGAACAGTATCA--TTTTTCCAAATGTTTCCAGGCTAAAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAACCGGCAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTTGCCTGGGG---TTTATATT-AGGGCCT-GGGGA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCATCAGTCCATCCACTATAGTCCGATTCAGATTCAGATGGTCAGATTGGACTCTACGGTGGAATTCCTAGTATAATATGGTCTTCACTT-CCT-TACAATGGGGTTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCATGCAATTA-TCTTTTGGCAACGCTGGGCAGCTGTTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACACCTACATGCTTATAAATACAGGTGGCTGAAGTTAACCAATTATCCAGAGGCAGTTAGATGAATCATGCA-ATTAAGCACTTGTCTGATTCACATCTCTACCTCATATGCGGAGGA-TTCTTTTCTC-------CCCTGTAAAA-TTTTATGGAGATTTACCATGGAGGGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTGCTCTTCCAATCTTT--TAGGTGTAATACATCAGTGTTAACACTCACTCATTCATATAGCAGGGGTTAATAATCAAGACTGGGGCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTTTCAGTTTAGCTGAAAGTACACAGTCTTCCTTGTTTCGAACATTTTCTACTTC------AT---GGCAATAC-----------ATTAAATTTAATCATGTTTTAGTTCACAAATTGTTTCTTGGTGTACAT-----GTGTTTTTATTTCCC-ACTATGTCATTATTTCAA--AA----------GAATCTACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTCT---A-AAAAAAAGATGAA-TA--AGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATACTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCACTAAAATGTCCAAAAAATATCTTA-TTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66079199 1381 + 204787373 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATACAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACTACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GCAAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGTA-CATTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACTGGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT-TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTTTTTTGATGTATAT-----GTGCTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTAAAA-AAAAAATGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCCGAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61011047 1381 - 192460366 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GCGAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGTA-CATTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCAAGCATGACATGGTGAACTGGAATGGAATCAAAGGTG-TCTTTCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACTGGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT-TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTTTTTTGATGTATAT-----GTGCTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTTAAA-AAAAAATGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAGAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11123288 1381 - 17224310 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GCGAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGTA-CATTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGTTTATAAATACGGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAACGGAATCAAAGCTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACTGGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT-TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTTTTTTGATGTATAT-----GTGCTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTAAAA-AAAAAATGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAGAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17435185 1355 - 41321030 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCGCAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAATAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCAGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GCGAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCACTATAGTCCGATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGCATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAACAGTA-CATTTTGCCACCACGCAATTA-T-TTTTGACAACCCAGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATG-------------AAGCACTTGTCTGAT-------------TCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACTGGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACGTTTT-TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTTTTTTGATGTATGT-----GTGTTTTTATTTTCC-ACTATGTCACTATTTCAA--AA----------TAATCGACTGCTCTACTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTAAAA-AAAAAATGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATATACACGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64506756 1381 - 101219884 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAATGCAGAGTGTTGCACAGGTGGGCTTGCCCTTGGTAACAGACACACCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAAGCAGAATTGTACAAAGGAAAGTCACCTTCAACTGTCACTAAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GCGAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCACTATAGTCCGATTCGGATTCAGATGGTCAGATTAGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGCA-CGTTTTGCCACCACGCAATTA-TCTTTTGACAACCCAGGGCAGTTGTTGTTTGTGGAGATTGTGT---------------GGTGGCATTGAACACCTACATGCCTATAAATACAGGTGGCTGAAGTTAACCAATTATTCAGAGGCAGTTAGATGAATCACGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAAAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCATTCATATAGCAGAGGTAAATAATCAAGACTGGGTCATCATAGAAGC-AGCAAGTCTTGAATTGTGCAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAGTAC--AGTCTTCCTTATTTCAAACATTTG-TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGGTTTTTGATGTATAT-----GTGTTTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCAACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTTAAAA-AAAAAAAGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCCCTGTTACTCCA---ATTAACATGCTGTATATACATGTGTATTGCAAAAAATAACTAGATTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-TTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 892597 1365 - 924385 CT-----GTAAAACTGGGTTGTAAAtaaagttctcagtatataaa-tgaatgcagagtgttgcgcaggtggacttgcccttggtaacagacacacctgtgcctatcaaacac-aaa-acatggtatttaattttggaaaattgctaatggcaagcagaattgtacaaaggaaagtcaccttcaactgtcactaaggaagaaacaaagATATCATGAACAGTATTA--TTTTTCCAAACGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAACCACTGAACAATGAAATGGGCAGTAATCTGCCAAACCCATACAGCTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GCGAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCTCTATAGTCCGATTCGGATTCAGATAGTCAGATTGGACTCTAAGGTGGAATTCTTAGTATAATGCAGTCTTCGCTT-CCA-TACAATGTGGTTCC---TGG--TTT-TTATCCTTTACCTTGGCACTGTTCAAACAGTA-CATTTTGCCAGCACGCAATTA-T-TTTTGACAACCCAGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGTATTGAACACCTACATGCTTATAAATACAAGTGGCTGAACTTAACCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGAT-------------TCATATGTAGAGGA-TTCTTTTCTC-------CCTAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCCTGGTTCTAGCATGACATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCACTCATATAGCAGAGGTAAATAATCAAGACTGGGTCATCGTAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAGTAC--AGTCTTCCTTATTTCAAATGTTTT-TACTTC------AT---GGCAATAG-----------ATTACATTTAACCATGTTTTAGTTCACAAATTGTTTTTTGATGTATAT-----GTGTTTTTATTTTCC-ACTATGTCACTATTTCAA--AA----------GAATCGACTGCTCTTCTGGTTAAATTCGCTTACCAACACTCT------TTGCCTTT-AAA-AAAAAATGATGAA-TAACAGAGCCAAATTTGAAATGGCCATCTCTGTTACTCCA---ATTAACATGCTGTATATACATGTGTATTGCAAAACATAACTAAATTTTCCTGGGCTTGGCATCCCTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6733620 1380 - 10587913 CT-----GTAAAACTGGGTTCTAAAtaaagttctcagtatataaa-tggatgcagagtgttgcgcaggtgggcttgcccttggtaacagacacacctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaagcagaattgtacaaaggaaagttaccttcaactgtcactcaggaagaaacaaagATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCTTTCCAGAATCACTGAACAATGAAATGGGTAGTAATCTGCCAAACACATACAGTTGTGTGCCTGTTTGCCTGGGG---TGTATATT-AGGGCCT-GGGAA-AACA--AAGTTAGGGAAGTAAGGCTCCAGGGTAGCGTCAGTCCATCCACTACAGTCCAATTCGGATTCAGATGGTCAGATTGGACTCTAAGGTGGAATTCCTAGTATAATGCAGTCTTTGCTT-CCA-TACAATGTGATTCC---TGG-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGCA-TGTTTTGCCACCACGCAATTA-TCTTTAGACAACCTAGGGCAGTTGTTGTTTGTGGAGAGTGTGT---------------GGTGGCATTGAACGCCTACATACTTATAAATACAGGTGGCTGAAGTTAACCAGTTATTCAGAGGCAGTTAGATGAATCATGTA-TTTAAGCACTTGTCTGATTCACATCTCTACCTCATATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTGTGGAGAGCAGATGTCATGGTTCCAGCATGATATGGTGGACTGGAATGGAATCAAAGGTG-TCTTCCAATCTTT--TAGGTGTAATACATCAGTCTTAACATTCACTCATTCATATAGCAGGGGTAAATAACCAAGACTGGGTCATCATAGAAGC-AGCAAGTCTTGAATTGTGGAGAGTCCTGCTTTTTTGTTGTCATTTTATTGTCAGTGTAGCTGAAAATAC--AGTCTTCCTTATTTCAAACATTTT-TACTTC------AT---GGCAGTAG-----------ATTATATTTAATCATGTTTTAGTTCACAAATTGTTTTTTGATGTATAT-----GTG-TTTTATTTTCC-ACTATGTCATTATTTCAA--AA----------GAATCGACTGCTCTTCGGGTTAAATTTGCTTACCAACACTCT------TTGCCTTTAAAA-AAAATATGATGAA-TAACAGAGCCAAATTTGAAATGACCATCTCTGTTACTCCA---ATTAACATGCTGTATATACATGTGTATTGCAAAAAGTAACTAGATTTTCCGGGGCTTGGCATCCTTAAAATGTCCAAAGAATATCTTA-GTCCCATGAACCTAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGCGAGCTGCCATTCCC-AAGGGAAATAATGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46068474 1391 - 98464013 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAGAGTGTTGTGCAGGTGGGTTTGCCCTTGGTA--GGGCACAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGAATTATACAAAAGAAAGTCACCTTCAACTGTCACTCAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGCCCTTCCAGAACCACTGAACAATGAAATGGGTAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTTTCCTGGGG---TGTATATT-GGGGCCT-GGGGA-AACA--AAGTTGGAGAAGTAAGGCTCCAAGGTAGTGTCATTCCATCCACTATAGACTGATGTAGATTCAGACAGTCAGAATGGACTCTAAGGAGGAACTCATATTATAATACAGTCTTTACTT-CCT-TACACTGTGGTTCC---TGA-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGCA-GGTTTTGTCACCATGCAATTA-TCTTTTGGCAAGTCTAGGCAGTTGTTGCTTGTGGAGAATGTGTTGCTTGTGGAGAATGTGTGGTGTCGAACACCTACATGCTTATAAATACAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTTAGCACTTGTCTGATTCACATCTCTACTTCAAATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGTAGATTTACTATGGAGAGCAGATGTCCTGGTTCTAGCATTACATGGTGAACTGGAATGGAATCAAAGGTGCTCTTTCAGTCTTT--TATGTGTAATATATCAGCGTTAACACTCACTCATTCATATAGCAGGGGTAAATAATCAAGACTGGGACAACATGGAAGC-AGCAAGTCTTGAACTGTGGAGAGCCTTGCTTTTTTGTTGTCATTTTATTGTCATTTTAGCCAAAAGTACACAGTCTTCCTTGTTTCAAACATTTTCTACTTC------AT---AACAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAATTGTTTCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTATGTTATTATTTCAA--AA----------CAGTCAATTGCTCTTCTGGTTAAATTCACTTACCAACCTTCT------TTGCCTCT---G-AAATAAACATGAA-TAACAGAGCCAAATTTGAAATGACCATCCCTTTTACTCTA---ATTAACATACTGTATATACATATGTATTACAAAAAATAACTACATTTTCCTGAACTTGGCAGCCCTAAAATATCC-AAAAATATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i calJac3.chr15 C 0 I 3 s saiBol1.JH378290 2553197 1396 - 2763108 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAGAGTGTTGTGCAGGTGGGTTTGCCCTTGGTAACAGACACAGCTGTGCCTATCAAACAC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGAATTATACAAAAGAAAGTCACCTTCAACTGTCACCCAGGAAGAAACAAAGATATCATGAACAGTATTA--TTTTTCCAAATGTTTCCGGGCTAGAGTTGCATTCGTTGCCCTTCCAGAACCACTGAACAATGAAATAGGTAGTCATCTGCCAAATGCATACAGCTGTGTGCCCGTTTTCCTGGGG---TGTTTATT-GGGGCCT-GGGGA-AACA--AAGTTAGGGAAGTAAGGCTCCAAGGTAGTGTCAGTCCATCCACTATAGACTGATGCAGATTCAGATGGTCAGAATGGATTCTAAGGAGGACCTCATATTATAATACAGTCTTTACTT-CCT-TACACTGTGGTTCC---TGATTTTT-TTATCCTTTACCTTGGCACTGTTCAAGTAGCA-CGTTTTGTCACCATGCAATTA-TCTTTTGGCAACTCTAGGCAGTTGTTGCTTGTGGAGAATGTGTTGCTTGTGGAGAATGTGTGGCGTTGAACACCTACACGCTTATAAATACAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTTAGCACTTGTCTGATTCACATCTCTACTTCAAATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGAGCAGATGTCCTGGTTCTAGCATTACATGGTGGACCGGAATGGAGTCAAATGTGCTCTTTCAATCTTT--TATGTGTAATATGTCAGTGTTAACACTCACTCATTCATATAGCAGGGGTAAATATTCAAGACTGGGACAACATAGGAGCAAGCAAGTCTTGAACTGTGGAGAGTCTTGCTTTTTTGTTGCCATTTTATTGTCATTTTAGCCAAAAGTACACAGTCTTCCTTGTTTCAAGCATTTTCTACTTC------AC---AGCAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAATTATTTCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTGTGTTATTATTTCAA--AA----------CAGTCAATTGCTTTTCTGGTTAAATTCACTTACCAACCTTCT------TTGCCTCT---GAAAAAAAACATGAA-TAACAGAGCCAAATTTGAAATGGCCATCCCTTTTACTCTA---ATTAACATACTGTATATACATGTGTATTACGAAAAATAACTGGATTTTCCTGAACTTGGCAGCCTTAAAATATCC-AAAAAAATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i saiBol1.JH378290 C 0 I 3 s cebCap1.NW_016107467v1 277597 1382 - 4835464 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAAAgtgttgtgcaggtgggtttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcagaattatacaaaagaaagtcaccttcaactgtcactcaggaagaaacaaagATATCATGAACAGTATTA--TTTTCCCAAACATTTCCAG---------GCATTAGGTGCCTTTCCAGAACCACTCAACAATGAAATGGGTAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTTTCCTGGGG---TGTATATT-GGGGCCT-GGGGA-AAGA--AAGTTAGGGAAGTAAGGCTCCAAGGTAGTTTCAGTTCACTCACCATAGGCTGATGCAGACTCAGATGGTCACACTGGATTCTAAGGAGGAACTCATATTATAATACAGTCTTTACTT-CCT-TACATTGTGTTTCC---TGA-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAGCA-CGTTTTGTCACCGTGCAATTA-TCTTTTGGCAACTCTAGGCAGTTGTTACTTGTGGTGAATGTGTTGCTTGTGGAGAATGTGTGGCTTTGAACACCTACACGCTTATAAATACAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGCA-TTTTAGCACTTGTCTGATTCACATCTCTACTTCAAATGTAGAGTA-TTCTTTTCTC-------CCCAGTAAAA-TTTTATGGAGATTTACTATGGAGAGCAGATGTCCTGGTTCTAGCATTGCATGGTGGACTGGAATGGAATCAAAGGTGCTCTTTCAATCTTT--TATGTGTAATATATCAGTGTTAACACTCACTCATTCATATAACAGAGGTTAATAATCAAGACTGGGACAACATAGAAGC-AGCAAGTCTTGAACTGTGGAGAGTCTTGCTTTTTTGTTGTCATTTTATTGTCATTTTAGCCAAAAGTACACAGTCTTCCTTGTTTCAAACATTTTCTACTTC------AT---AGCAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAATTGTTTCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTATGTT-TTATTTCAA--AA----------TAGTAAATTGCCCTTCTGGTTAAATTCACTTACCAACCTTAT------TTGCCTCT---G-AAAAAAACATGAA-TAAC--AGCCAAATTTGAAATGGCCATCCCTTTTACTCCA---ATAAACATACTGTATATACATGTGTATTATGAAAAATAACTAGGTTTTCCTGAACTTGGCAGCCCTAAAATATCCAAAAAATATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3743518 1392 + 4093027 CT-----GTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAA--CAGAgtgttgtgcaggtgggtttgcccttggtaacagacacagctgtgcctatcaaacac-aaa-atatggtatttaattttggaaaattgctaacggcaggcagaattatacaaaagaaagtcaccttcaactgtcactcaggaagaaacaaagCTATCATGAACAATATTA--TTTTTCCAAATGTTTCCAGGCTAGAGTTGCATTCGGTGTCCTTCCAGAACCACTGAACAATGAAATGGGTAGTAATCTGCCAAATGCATACAGCTGTGTGCCTGTTTTCCTGGGG---TGTATATT-GGGGCCT-GGGGA-AACA--AAGTTAGGGAAGTAAGGCTCCAAGGTAGTGTCAGCCCATCCACTATGGACTGATGCAGATTCAGATGGTCAGAATGGACTCTAAGGAGGAACTCGTATTATAATACAGTCTTTACTT-CCT-TACACTGTGGTTCC---TGA-TTTT-TTATCCTTTACCTTGGCACTGTTCAAGCAACA-CATTTTGTCACCATGCAATTA-TCTTTTGGCAACTCTAGGTAGTTGTTGCTTGTGGAGAATGTGTTGCTTGTGAAGAATGTGTGGTGTTGAACACCTACACGCTTATAAATACAGGTGGCTGAAGTTAATCAATTATTCAGAGGCAGTTAGATGAATCATGTA-TTTTAGCACTTGTCTGATTCACATCTTTACTTCAAATGTAGAGGA-TTCTTTTCTC-------CCCAGTAAAA-TTTTAGGGAGATTTACTGTGAAGAGAAGATGTCCTGGTTCTAGCATTACATGCTGGACTGGAATGGAATCGGAGGTGCTCTTTCAATCTTT--TATGTGTAATATATCAGTGTTAACACTCACTCATTCATATAGCAAGGGTAAATAATCAAGACTGGGACAACACAGAAGC-ATCAAGTCTTGAACTGTGGAGAGTCTTGCTTTTTTGTTGTCATTTTACTGTCATTTTAGCCAAAAGTACACAGTCTTCCTTGTTTCAAACATTTTCTACTTC------AT---AGCAATAG-----------AATAAATTTAATCATGTTTTAGTTCACAAA-TGTTTCTTCATGTAT-T-----GTGTTTTTCTTTTCC-ATTATGTTATTATTTCAA--AA----------CAGTCAACCACTCTTCTGGTTAAATTCACTTACCAACCTTCT------TTGCCTCT---G-AAAAAAACATGAA-TAACAGAGCCAAATTTGAAATGGCCATCCCTTTTACTCCA---ATTAACATACTGTATATACATGTATATTAC-AAAAGTAACTAGATTTCCCTGAACTTGGCAGCCCTAAAATATCCAAAAAATATCTTA-GTCCCATGAACATAAACTTCAAAATGTCAATTGCATTTACAATTATGAATAATAGTGAACTGCCATTCCC-AAGGGAAATAATAA i aotNan1.NW_018502033v1 C 0 I 3 s otoGar3.GL873534 11080716 1376 + 30473821 tt-----GCAAAACTGGGTTCTAAATAAAGTTCTCAGAATATAAA-TGAACACAGAGTGTCGTGCAGGTGGGTTTGTCCTTGGTAACAGACACAGCTGTGCCTATCAAACGC-AAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCGGGATTGTACAAGGGAAAGTCACCTTCAACTGTCACTCAGGAAGAAACAAAGATATCATGAGCAGGACTA--TTTTTCCAAATGTTCCCGGGCTAGAGTTGCACTGGGTGCCCTTCCAGAAGCACTGAACAATGAAATGGGGAGTTATCTGCCAAGCACATACAGCTGTGTGTCTGTTTGCCTGGGG---TGTACGTT-GGGGGCTGGGGGA-AAGG--GAGCTCAGGAGGTAAAGATGGGGGGTAGTGTCAGCCCACTCTTAACACGCCAATCC--------CTGGTCTGAATGGATTCTTACGCAGAGGCCAC------GTACAGTCTTTGCTC-CTT-TAGGTTCCTGTTCCCCATGT-GTTT-TTGTCCTTTCCCTTGGCACCTTTGAGGCAGCAGCATTTCAGCACCAGGCAATCACTCGCTTGGCAACTCCGGGCAGTCGCTGC---TGGGGAATGTGT---------------GGTGGCACCAGACACCTACATGCTGATGAATGCAGGTGGCTGAAGTTAACCGGTTACTCAGAGGCAGTTGGATGAATCACGTA-TTTTAACACTTGTCTGACTCACATCTCTGCTTCACACGTACAGGATTTTTTTTCTC-------CCCAGTGAAG--TTTATGGAGTTTTACTATGGAGAACAGATGTCCTGGTTCTAGCACTACACGGCAGACTGGAAGGCTTTCAAAGGTGCTCTTCAAGTGTTT--AAGGCATAATAGATCAACGTAAACACTCACTGATTAA---ATTACAGGCAAGCGATCAGGAC-----------AGCAGC-AGTCAGTCTCCCATGGGGCAGGGTCCTGCTTTCTTGGGGTTGTTTCATTGTCATTTTAACTGAAAGTACAAACGCTTCCTTGTTTCAAGCATCTTCTACTTC---AGGAC---GGCAATAGATCATATTTTAATCATATTTCATCATGTTTTAGTCCACAGAATGTTTCTTTGTGCCTAT-----GTGTCTTTATTCTCCAACTATAGCATAATTGCAATGGA----------GAGTTAATTGCTCTTCTGGTTAAATTCACTTCCTAACCTTCT------TTGCTCCT--GA-AAAAAAAGACCAGTTAACAGAATCCAATTTGAAGTGGCCACCCATGTTAGGCCA---TTTAACATATGGCGCATACATATGTATTACAACGAAGAGCTAGATTTTCCTGGGCTTGACATCCCTAAAATATCCCCAAAACATCTTA-GTTCCATGAACACAAACTTCAAAATGACAGTTGCATTTACAATTATGAGTAATAGGAAACTGCCGTTCTT-GAGGGAAATAATAA i otoGar3.GL873534 C 0 C 0 s mm10.chr6 45788062 1353 - 149736546 TT-----GTAAAACTTGGTTCCAAATAAAGTGTTCAGTATATAGA-TGATCACAGAGTGCCGTGCAGGTGGATTTGCCCTTGGTACCAGACACAGCTGTGCCTATTAAATAC-AAA-ATATGGTATTTAATTTGGGAAAATTGCTAACGGCAGGCAGGATTGTGCAAGGGAAAGTCACCTTCAACTGTCAGTCAGAACAAGACAAAGATGTCATGAACAGAAGTG--TTTTTCCAAATGTTTCTGTGCTACAATTGCGTTTGGTGGCTTTTCAGAGGCACTGAACAATGAAATGGGTAGCAATTTGCCAAGCACATACAGCTGTGTGTCTGTTTGCCTGGAG---TGTGAGTTGGGGGCTT-GAGGA-AATG--GGGTTAGAGAAACAAGGATGATGGCTATCACCAGCTCATCTATTATATGCCAAT------TGCACTGGTCAGAATGGCTTCCTAGGTGCAATTCATATTATAATGCACTTTCCAATT-CCTCTCCACTGCTGGGCC---ACA-TGTT-TTATCCCATACTTTGGCACAAGATGGGTTGCAGTATTTCACAATGCTGCAATTATTCTTTTGACAAATCCAGGCAGTTGACATTTATGAATCAAGTAG---------------GATGGCACCCCATACCTCTGTGCTCATGAATACAGGTGGC-AAAGCTGACCAATTATTCAGAGGCAGCTAGATGCAGCACATG-TTTTGGTGTGTGTCTGATTCCCATTCCTACTCCA-ATGTAGAGGG-TTCTTTTCT--------CTGGGCTGAA-TTACATGGAGTTTTACTGTAGAGAGCAGATGTCCTAATTCAACCACTCCATGGTACACTGGAATGGATTCAAAGGTA-TACTCCAGTCTTT---GCGTATAATTTATCAGTGGGAACACTCACTGATTC-TATAGCAAA--CACATAATCAGATCCAAAACATCGTTGAAAT-GGCCAAC-----ATTGTTAAGA------------TCTTGTCATTTTA----------AACTGAAAGTACAAGGTCTTCCTTGTGTCAAACATTTCCCACTTT------ACAGAGGCAATTA-----------ATTCCG-TTAAGCATGGTTTAGTTCTCAAATTAGTTCTTCCTGCCTGTCTTGAGTGTCTCGAGTCTTC-AC-------CTATTACAG--AATGGAAAGAACAAGTCATTTGCACATCCATTTAAGTTGACCTCTTAGTTTTTTTTTTTATTTTCTCT--AA-AAGTCAGAATGAA----------CAGACCTGAGATGGCCATTGGGATTAATGCATACGTTAATATG--ATAGGTTCATATGTATTACAAAAAA-AGCTATGTTTTCTTAAACTTGACATCTCCAAAATACCCCCAAACTATCTTA-GTCCCATGGACAT-AACTTCAAAATGTCAGCTGCATTTACAATTACGAATAATAGTGAAATTCTACTCCTGGGGGGGAATAATAA i mm10.chr6 C 0 C 0 s canFam3.chr20 16614817 1369 + 58134056 TTCCATACTAAAACTGGGTTCTAAATAAAGTTCTCAGTATATAAA-TGAACACAGAGTGCTGTGCAGGTGGGTTTGCCCTTGGTA--AGACACAGCTGTGCCTATCAAATACAAAA-ATATGGTATTTAATTTTGGAAAATTGCTAACGGCAGGCAGGACTGTATGAGGGAAAGTCACCTTTAACTGTCAATCAGGAAGAAACAAAGATATCAGGAACAGGATTA--GTTTTCCGAATGCTTCCAGGCTAGAACTGCATCCGATGCCCTTCCAGAAGCACTGAACAATGAAATGGGTAGCTAGTTGCCAAGCACATACAGCTGTGTGTCTATTTGCCGGGGGGTTTGTGTTTT-GGGGTCT-GAGAA-AAAATGAGGTTGGGGAAGTAAGCATTGAAAGTAGCGTCAGCCCATCATCTGTTAT---ATGCCAATTCTGCTGGTCAGAACAAACTCCGAGATAGAATTTATATTATAATGCAGTCCTCACTTACTT-TTCATTGATATTCT---TCA-TTTT-TTATCCCTTACTTTGGCAGAGCTCAAACAGCAGTGTCTCACCATGGTGCAATTACTCTTTTGGCAACTCCAGGCAGTTGTTAGTAGTGGAGAATGTGT---------------AGTGGCACGGAACACCTCCGGGCTTATAAATACAGGTGGCCTAAGTTAACCAATTATTTAGAGGCA----GATAAGTCATGCA-GTTTAGCAGTTGTCTGATTCACATCTCTACTCCACATATAGAGGA-TTCCTTTTTC-------CCTGGTGAGATTTTTATGGAGCTTTACTAGGAAGACCAGATGTCCTGGTACTTGCATCACATGATAGACTGGAGTAGATTCAAAGGTGCTCTTCCAGTGTTT--CAGGTGTGGTATATCAGTGCTATCACTGACTGACTC-TCCAGCAGA--TAAATA---AAGATTGGGACATCACAGAAGC-AGCTAGCCT---AGCCTGGAGTGTCCTGCTTTCATGTCGTCTTTTTATTGCCATTTTAACTGAAAGTACA-GACCATCCTTGTTTCAAACATTTTTTACTTT---ACAAT---GGCAACAG-----------ATTCCATTTAATGACACTTTACTTCACAAATTGTTGCTTCATGCATAT-----GT--CTTTATTCTCC-A--------TAATTTCAATGAA----------GAGTCCATTGTTCTGCTTGTTAAACTCACTTTCCAACCTTCT------TTGTTCCC---T-AGAAA--CATGAA-TAATAAAGCC-AATCTGAAATGGTCATCTAAGTTAGCCCA---ATTAACATATGGTAGATACATATGGATTACAAAGAAAAACTAGATTTTCCTGGGCTTCATATCCCAAAAATGCCC-AAAAATATCTTA-TCCCCATGAACATAAACTTCAAAATGTCAATCGCATTTACAATTATGAATAATAGGGAACTGTTGCTCCC-AAGGGAAATAATAA i canFam3.chr20 C 0 I 3 s dasNov3.JH563077 1870242 1366 - 2187301 CC-----ATAAAACTGGGTTCTAAATAAAGTCCTCAGTAAAAAAACTGAACTTGGATTGCTATGCAGGTGGGTTTGTGCTTGGTAACAGACTCAGCTGTGCCTATCAAACCC-AGATGTATGGTACTTAATTTTGGAATATTGCTAGCAGCAAACAGGATTTTACAAGGGAAAGGCACCTTCAACTGTCACTCAGGAAGAAACAAATATACCATGAACAGTATTATTTTTTTCCAAATGTTTTCAGGCAAAAGTTGTATCCCATGTCCTTCCAAAACCACTGAACAATGAAATGGGTAGTTAT-TGGGAAGCACATACAGCTGTGTGTCAGTTTGCCTGGGG---TGT--GTT-GGGGACT-GGGGGTAATG--AGGTTAGCAAAGTGAGGATTGAAGGTAGTTTCAGTCCATCCA--ATGATACAAT---AATTCTGTTGGCCAAAATGAATTCCTGGCTGGAATTCATATTAGAATGTGGTTTTCACTTACTT-TTTACTGTTACTCC---TCA-TTTTGTTATTTCTTA------CAGTGCTTAGGAAACAGTGTTTAACCATGGTGCAGTTATTCTTTTGGCAACTCCAGGCAGTTGTTGCTTGTGAAGAAAGTGA---------------AGTGGCACAGAACACCTACGTGCTTGTGAGTACAGGTGGCCAGAGGTAACCAATTATTCAGAGGCAGCCAAATGAGCCATGTATTTTTTACACCTGTCTGATTCACATCTCCACACCACATGTAGAGGA-TTCTCACCCCACACACACACCATGAAA-TTTTATGTAGTTTTACTATGGAAAGCAGATGTCCCAGTCCTAGCATTACATGGTGGACTGGAATGGATTCAGAGGATCTGTTCCAGTCTTTTTTTGGTGTAGTATATCAGTGTTAACGTTGGCTCATTT-TAAAGCAGA--TAAATA---AAGATTGGAATGTTATAGAAGA-ATC-AGTCT----GCATGGAGAGTCCCAATTTTTTATCGTGGTCTTACTGTCATTTTTTCTGAAATTACAAGGTCTTCCTTGTTTTAAACATCTTCTACTACTTACTGTT---GGCAATAG-----------ATTCTATTTAATGATGTTTTAGTTCACAAATTGTTTCTTCATGAATAT-----GTGTCTTTATTCTTTGACTATATCATCATTTCAATGAA----------GGGTCAATTGCTCTGCTGGCTAAATTCATTTCCCAAACTTCT------TGTCCCCC---C-AAAAA---ATGAA---------CCAAATTTGAAATGACCCTCCATGTTACTC-----CTTAAAATATGATATTTGCATATGTATTAAAAAGAAACACTAGACTTTCCTGGGCTTAACATC-CTAAAAAGTC--AAAAATATCTTATTTTCCATGAA----AGTTTCAAAATGTCAACTACATTTAAAATTATGAATAATTGGAAACTGCTATTCCT-AAGGGAAATAATAA i dasNov3.JH563077 I 206 I 3 a score=56780.000000 s hg38.chr14_KI270725v1_random 20101 3 + 172810 AAG s panTro5.chr3 202014598 3 - 202621043 AAG i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782623 3 - 205426864 AAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12594 3 - 17846 AAG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599334 3 + 86207423 AAG i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080583 3 + 204787373 AAG i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61012431 3 - 192460366 AAG i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11124672 3 - 17224310 AAG i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17436543 3 - 41321030 AAG i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64508140 3 - 101219884 AAG i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 893965 3 - 924385 AAG i manLeu1.NW_012098965v1 I 3 C 0 s nasLar1.chr2 57743466 3 + 181502896 AAG i nasLar1.chr2 N 0 I 635 s colAng1.NW_012114711v1 6735000 3 - 10587913 AAG i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46069868 3 - 98464013 AAG i calJac3.chr15 I 3 C 0 s saiBol1.JH378290 2554596 3 - 2763108 AAG i saiBol1.JH378290 I 3 C 0 s cebCap1.NW_016107467v1 278982 3 - 4835464 AAG i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3744913 3 + 4093027 AAG i aotNan1.NW_018502033v1 I 3 C 0 s otoGar3.GL873534 11082092 3 + 30473821 AAG i otoGar3.GL873534 C 0 I 3 s mm10.chr6 45789415 3 - 149736546 GAG i mm10.chr6 C 0 I 3 s canFam3.chr20 16616189 3 + 58134056 AAG i canFam3.chr20 I 3 C 0 s dasNov3.JH563077 1871611 3 - 2187301 AAG i dasNov3.JH563077 I 3 C 0 a score=4325475.000000 s hg38.chr14_KI270725v1_random 20104 320 + 172810 AAATATTTCATAG--TTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCATACACTCCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATCT--GTTTTTTTC--------TAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA s panTro5.chr3 202014601 321 - 202621043 AAATGTTTCATAGA-TTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCATACACTCCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATCT--GTTTTTTTC--------TAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782626 321 - 205426864 AAATGTTCCATAGA-TTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCATACACTCCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATCT--GTTTTTTTC--------TAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12597 320 - 17846 AAATATTTCATAG--ATTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAGTCTAATAAATTCCTAATATAGCATACACTCCTCAAAAGTG-TTCATTG-----TTC--------AAAGAAACTCAA--GTGAAAATA-----TGGTATGAAATCCTCATGTGCACAGAGAGATAAAGATAAATGCAGCATTTTAAAAATATCT--GTTTTTTTC--------CAGTACAAAGAAAACATATCGGAAATATTAAAGTGAGCATAA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599337 318 + 86207423 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCCTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTCATATAGCATACACTCC---AACGTG-TTCATTG-----TTC--------AAAGAAACTCAA--GTGAAAATA-----AGGTATGAAATCCTCATATGCACAGAGAGATAAAGATAAATGCGGCATTTTTAAAATATCC---TTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATTTTAAAGTGAGTATAA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080586 320 + 204787373 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGTG-TGCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC----TTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012434 320 - 192460366 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGTG-TGCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC----TTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124675 320 - 17224310 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGTG-TGCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC----TTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436546 320 - 41321030 AAATGTTTAATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGTG-TGCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATC----TTTTTTTC--------TAGTACAAAGAAAACATATCAGACATATTAAAGTGAGCATAA i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508143 319 - 101219884 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTCTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGTG-TTCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATAT-----CTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 893968 320 - 924385 AAATGTTTAATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTTTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCTTAATATAGAATACACTCCTCCAAAGTG-TGCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGCACAGAGAGATAAAGATAAATGCAGCATTTTTAAAATATG----TTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735006 320 - 10587913 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATGATTTGCATGTTTCCACCAAAAGGGAAT-AACACTCTTAATATGGAATATCCCTCTGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGAATACACTCCTCCAAAGTG-TTCATTG-----TCC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATTAAATCCTCATATGAACAGAGAGATAAAGATAAATGCAGCATTTTAAAAATATA----TTTTTTTC--------TAGTACAAAGAAAACATATCAGAAATATTAAAGTGAGCATAA i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46069871 322 - 98464013 AAATGTTTCATAGGTGTTTTTTAGCAAAAGAAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTACTATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATGCAATCCTCATATGCACAGAGAGATAAAGATAAGTGCAGCATGTTTTAAATATCT--GGTTTCTTC--------TAGTACAAGGGAAACATATCAAATATATTAAAATGAGCATAA i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554599 322 - 2763108 AAATGTTTCATAGATGTTTTTTAGCAGAAACAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTAAA--GTGAAAATA-----AGGTATGAAATCCTCATATGCACAGAGAGATAAAGATAAGTACAGCATATTTTAAATATCT--GGTTTCTTC--------TAGTACAAAGGAAATATATCAAATATATTACACTGAGCATAA i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 278985 322 - 4835464 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTAAA--GTGAAAATG-----AGGTATGAAATTCTCATATGCACAGAGAGATAAAGATAAGTGCAGCATGTTTTAAATATCT--GGTTTCTTC--------TAGTACAAAGGAAACATATCAAATATATTAAAATGAGCGTAA i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3744916 322 + 4093027 AAATGTTTCATAGATGTTTTTTAGCAAAAACAAATAATTTGCATGTTTCCACCAAAAGGGAAT-AAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTGTGGAAACAAAATTCATAACCAGCTGCCATTTGATGAAATCTAATAAATTCCTAATATAGCTTATACTTCTCCAAAGTG-TTCATTG-----TTC--------AAAGAAACTAAA--GTGAAAATA-----GGGTATGAAATCCTCATATGCACAGAGAGATAAAGATAAGTGCAGCATGTTTTAAATATCT--GGCTTCTTC--------TAGTACAAAGGAAACATATCAAATATATTAAAGTGAGCATAA i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11082098 335 + 30473821 AAATGTTTCTTAGATGTTTTTTTGCAAAAATAAATGATTTGCATTTTTTCACCAAAAGGGAAC-AAAGCCTTTAATAAGGAATATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGTCACTTGATGAAATCTAATAAATGTATAACATAGCATGCATTTTTCCAAAGCGTTTCATTGGCATTTTCAAAACAAAAAAAAAAAAAAA--GGGGAAAGG-----AGGTACAGAATTCTCATCTGTGCAGATAGATAAAGATAAATGTGGTTTGTTTTAAGTCTGT--ATTTCTTTC--------AACTAGAAAT-AAATGTATCAGAAATACTAAAGCAAACACAG i otoGar3.GL873534 I 3 C 0 s mm10.chr6 45789421 324 - 149736546 AAAGGCTTCATAGATGTTTTTCAGCAAAAACAAATAATTTGCATTTTTGTACCAAAGGGGAAT-AAAACCTTTAATATGTAATGTCCCTCAGGTCTCCTTTTTGGAAATGAAATTCATAACCACCTGCCATTTGATGAAG-CTAGTAAATTCCTGATATAGTATACACTTCTCCAAAGTA-TTTGCTGGCATTTTC--------AAAACAGCTAAT--CAAAAAGTAAGTGTAGACGTAGGAGTCTCACA-GTCCAGAGGG--AAGAATAAATGCAATATGCTTTAAATGAAT--GGTTGT-----------CAGTA-ACAGAAAATGTACCTGGAATATTAATGTATAAATAA i mm10.chr6 I 3 N 0 s canFam3.chr20 16616192 328 + 58134056 AAATGTTTCATAGATGTTTTTTAGCAAAAGCAAATGATTTGCATGTTTCTACCAAAAGGGAAT-AAAGCCTTTAATATGGAGTATCCCTCAGGTCTCCTTTTTGGAAACAAAATTCATAACCACCTGCCATTTGACGAAATCT----AATTGCTAATACAGCGTACACTTCTGCAAAGTG-TTCACTGGCATTTTC--------aaaaaaaaaaaattttaaaaataGAG--AGGCATGCTAGCCTCATCTACACAGAAAGAGAATGACAAATGTAGCATGTTTTTGGTGTATGTGTTTTTTCC--------TATTAGAAACAAAACATACCAGAAATAT--AAGTGAGCATGA i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1871614 329 - 2187301 AAATGTTTCATAGATGATTTTTGGTAAAAACAAATGATTTGCATGTTTCCACCAGAAGGGAATGAAAACCTTTAATATGGAATATCCCTCAGGTCTCCTTTTAGGAAACAAAATTCATAACCACCTGCCATTTGATGAAATCTAATAAATTCCAAATACAGTATACACATCTCCAAAGTA-TTCATTGGTATTATC--------AAA-------AA--ATGAAAAGG-----AGGCAGAGAAACCTCATCTACACAGA--GATAAGAATAAAAGTAGAATGTTTTATATTTGTGGGGTTTTCCCCTTTACATTACTACAAAGAAAACATACCAAAAAAATTAAAATGAGAATTA i dasNov3.JH563077 C 0 C 0 e nasLar1.chr2 57743469 635 + 181502896 I a score=2195700.000000 s hg38.chr14_KI270725v1_random 20424 187 + 172810 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACATTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCTTAGAGAATA-TGCATAAACCCTGTGTTTTGATTCATGTCATTTTATTCCTATTATTTATCCAAAGGGTAATTA------------------------AAATTT s panTro5.chr3 202014922 187 - 202621043 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATACTACCAGGTAGACTCATACACTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCGTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATGCAAAGGGTAATTA------------------------AAATTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204782947 187 - 205426864 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACACTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTTTGTTTTGATTCATGCCATTTTATTCCTATTATTTATGCAAAGGGTAATTA------------------------AAATTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 12917 187 - 17846 TTTCATCCCACAGCCATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACACTTCCTT-AATGGGTGTAAAATTTATTAACAACATTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGGGTAATTA------------------------AAATTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599655 187 + 86207423 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACTCACACACTTCCTT-AATGGGTGTAAAATTTATTAACAACCTTTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAACCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTACCCAAAGGGTAATTA------------------------AAATTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66080906 187 + 204787373 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTAGCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATAATTA------------------------AAATTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61012754 187 - 192460366 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCTTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATAATTA------------------------AAATTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11124995 187 - 17224310 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTATGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATAATTA------------------------AAATTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17436866 187 - 41321030 TTTCATCCCACAGCAACAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATAATTA------------------------AAATTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508462 187 - 101219884 TTTCATCCTACAGCAATAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATAATTA------------------------AAATTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894288 187 - 924385 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTAAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTATAATTA------------------------AAATTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735326 187 - 10587913 TTTCATCCCACAGCAATAG-TTTCAACTATACTTTAATTCTACCTGGTAGACTCAGACACTTCCTT-AATGGGTGTGAACTTTATTAACAACCATTTAGTTCTGTTTTTCATAGAGAATA-TGCATAAATCCTGTGTTTTGATTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTAATTA------------------------AAATTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070193 187 - 98464013 TTTCATCCCACAGTAATAG-TTTCAACTATACTTTAATTCTACCAGGTAGACACAGGCACTTCCTTAAATGGGGGTAAACTTTATTAATAA-CTTTTAGTTCTGTTTTTCATTGAGAATA-TGCATAAATCCTATGCTTTGACTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTAATGA------------------------AAATTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2554921 188 - 2763108 TTTCACCCCACAGTAATAG-TTTGAACTATACTTTAATTCTACCAGGTAGACACAAGCACTTCCTTAAATGGGGGTAAACTTTATTAATAACCTTTTAGTTCTGTTTTCCATTGAGAATA-TGCATAAATCCCATGCTTTGACTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTGATGA------------------------AAATTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 279307 187 - 4835464 TTTCATCCCACAGTAATAG-TCTCAACTATACTTTAATTCTGCCAGGTAGACACAAGCACTTCCTTAAACGGGGGTAAACTTTATTAATAACCTTTTAGTTTTGTTTTTCATTGAGAATA-TGCATAAATCCTGTGCTTTGACTCATGCCATTTTATTCCTATTATTTATCCAAAGTGTAACG-------------------------AAATTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3745238 188 + 4093027 TTTCATCCCACAGTAATAG-TTTCAACTATACTTTAATTCTATCAGGTAGACACAAGCACTTCCTTAAATGAAGGTAAACTTTATTAATAACCTTTTAGTTCTGTTTTTCATTGAGAATA-AGCATAAATCCAATGCTTTGACTGATGCCATTTTATTCCTATTATTTATCCAAAGTGCAATGA------------------------AAATTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11082433 203 + 30473821 TCTCTTCCCACAGTTATAG-TTGTGACTGAATTTTAACTCTCCTAG--------AGTTACTTTTTAAAACGAGTGTCAACTTTGCTCACAACTTTTTAGTTCTGCTTTT-ATAGATCATA-TGCATAAATAGAGTTCTCTGAGTCATCTGCTTTTATTTCTATTGTTCATACAATGCATGGTGATTTTTGTTTTGTTGTTGTTGCTGTTGCTTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16616520 173 + 58134056 TTTCTTCCCTCAGTAATAG-CTTTAACTAAAC-----------CAGACAGATTCA---ATTTTTTA-AATGGGTGTCAACTCTATTCATAACCTTTCAGTTTGGTTTTTCACAAGGAATA-TGCATAAATACTGCACTTTGTCTCATGCTGTGTTATTCTTATTATTTATACTATGCATAATTA------------------------AAATTT i canFam3.chr20 C 0 I 206 s dasNov3.JH563077 1871943 189 - 2187301 TTTCTTCCCACAGCAGTAGACTTTATCTATACTTTAACTGTAGCAGCCAAATTCAAACCATTTTTA-AATTGGTGTCAACTTTATTTATAACCTTTCATTTCTGTTTTTCACAGAGAATACTATGTAAAAACGGTGCTTTGACTCATGCTGTTTTATTCCTATTATTTATCCAATGCCTAATTA------------------------AAATTT i dasNov3.JH563077 C 0 I 204 e nasLar1.chr2 57743469 635 + 181502896 I a score=1526828.000000 s hg38.chr14_KI270725v1_random 20611 125 + 172810 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA s panTro5.chr3 202015109 125 - 202621043 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783134 125 - 205426864 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13104 125 - 17846 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599842 125 + 86207423 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGACCCATTAAGTAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGGAAAGCTGA i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081093 125 + 204787373 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATTCTATGCATAGAAAAGCTGA i rheMac8.chr2 C 0 I 3 s macFas5.chr2 61012941 125 - 192460366 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGCTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATTCTATGCATAGAAAAGCTGA i macFas5.chr2 C 0 I 3 s macNem1.NW_012018021v1 11125182 125 - 17224310 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATTCTATGCATAGAAAAGCTGA i macNem1.NW_012018021v1 C 0 I 3 s cerAty1.NW_012009469v1 17437053 125 - 41321030 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATGCTATGCATAGAAAAGCTGA i cerAty1.NW_012009469v1 C 0 I 3 s chlSab2.chr22 64508649 125 - 101219884 CTTTTTTGATGATGTAGATGGAATATGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i chlSab2.chr22 C 0 I 3 s manLeu1.NW_012098965v1 894475 125 - 924385 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAGGTTA-TTGATGCATTAAATAGTTAAATGAA---AAGCACCTTCACAG-----ATGTTTGGTAGAGAAAAATATGCTATGCATAGAAAAGCTGA i manLeu1.NW_012098965v1 C 0 I 3 s colAng1.NW_012114711v1 6735513 125 - 10587913 CTTTTTTGATGATGTAGATGGAATACGAAAATAGAAGGGAAGTTA-TTGACGCATTAAATAGTTAAATGAA---AATCACCTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCATAGAAAAGCTGA i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070380 124 - 98464013 CTCTTTTGATTATGTAGATGGAATATGGAAATATAAGGGAGGCTA-TTGACTCATTAAATGGTTAAATGAA---AATCTC-TTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCGAAACACAGCTGA i calJac3.chr15 C 0 I 3 s saiBol1.JH378290 2555109 125 - 2763108 CTTTTTTGATTATGTAAATAGAATATGGAAATATAAGGGAAGTTA-TTGACTCATTAAATGGTTAAATGAA---AATCACTTTCACAG-----ATGTTTTGTGGAGAAAAATATGCTATGTGAAACACAGCTGA i saiBol1.JH378290 C 0 I 3 s cebCap1.NW_016107467v1 279494 126 - 4835464 CTTTCTTGATTATGTAAATGGAATATGGAAATATAAGGGAGGTTATTTGACTCATTAAATAGTTAAATGAA---AATCATTTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCGAAACACAGCTGA i cebCap1.NW_016107467v1 C 0 I 3 s aotNan1.NW_018502033v1 3745426 125 + 4093027 CTTTTTTGATTATGTAGATGGAATATGGAAATATAAGCGAGGTTA-TTGACTCATTAAATGGTTAAATGAA---AATCACTTTCACAG-----ATGTTTGGTGGAGAAAAATATGCTATGCAAAACACAGCTGA i aotNan1.NW_018502033v1 C 0 I 3 s otoGar3.GL873534 11082636 125 + 30473821 TCTTACTGATAGTGTAGGTGGAGTCTTGAAATAAAAGGGAGGTGA-TAGACTCTTTAAATGGTTAAATAAA---GATCACTTGCACAG-----GTGTTTGGGGGAGAAAAATATTCCATGCACTGAAAAGTGGG i otoGar3.GL873534 C 0 I 3 s canFam3.chr20 16616899 123 + 58134056 CTTTCCTGATAACATAGGCTGAATTTTGCAATAGAAGGGAGGTTA-CTGACTCATT-AGTGGTTAAATAAA---GACCACCTAAAAAG-----GTGTTTGGGAGAGAAAAAC-TGCCACGCCCAGAAAAGCTGA i canFam3.chr20 I 206 C 0 s dasNov3.JH563077 1872336 132 - 2187301 CTTTACTGATAACATAGATGGAATTTGGAAATAGAAGGGAGGTTA-CTGAACCACACAGTGGCTAAATACAGCCAGATACCCAACCAGAAGGTATGTTTGG-AGAAGAAAATATGCCATGCACAGAAAAGCTGA i dasNov3.JH563077 I 204 C 0 e nasLar1.chr2 57743469 635 + 181502896 I a score=51870.000000 s hg38.chr14_KI270725v1_random 20736 3 + 172810 AAT s panTro5.chr3 202015234 3 - 202621043 AAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783259 3 - 205426864 AAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13229 3 - 17846 AAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599967 3 + 86207423 AAT i nomLeu3.chr21 C 0 I 3 s rheMac8.chr2 66081221 3 + 204787373 AAT i rheMac8.chr2 I 3 C 0 s macFas5.chr2 61013069 3 - 192460366 AAT i macFas5.chr2 I 3 C 0 s macNem1.NW_012018021v1 11125310 3 - 17224310 AAT i macNem1.NW_012018021v1 I 3 C 0 s cerAty1.NW_012009469v1 17437181 3 - 41321030 AAT i cerAty1.NW_012009469v1 I 3 C 0 s chlSab2.chr22 64508777 3 - 101219884 AAT i chlSab2.chr22 I 3 C 0 s manLeu1.NW_012098965v1 894603 3 - 924385 AAT i manLeu1.NW_012098965v1 I 3 C 0 s nasLar1.chr2 57744104 3 + 181502896 AAT i nasLar1.chr2 I 635 I 386 s colAng1.NW_012114711v1 6735638 3 - 10587913 AAT i colAng1.NW_012114711v1 C 0 I 3 s calJac3.chr15 46070507 3 - 98464013 AAT i calJac3.chr15 I 3 C 0 s saiBol1.JH378290 2555237 3 - 2763108 AAT i saiBol1.JH378290 I 3 C 0 s cebCap1.NW_016107467v1 279623 3 - 4835464 AAT i cebCap1.NW_016107467v1 I 3 C 0 s aotNan1.NW_018502033v1 3745554 3 + 4093027 AAT i aotNan1.NW_018502033v1 I 3 C 0 s otoGar3.GL873534 11082764 3 + 30473821 AAT i otoGar3.GL873534 I 3 C 0 s canFam3.chr20 16617022 3 + 58134056 AAT i canFam3.chr20 C 0 I 5 s dasNov3.JH563077 1872468 3 - 2187301 AAT i dasNov3.JH563077 C 0 C 0 a score=3660471.000000 s hg38.chr14_KI270725v1_random 20739 323 + 172810 ----GTTTTTCCACAAATG-TTAGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTTGTTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAG--CT--GTTAAGataggagagtcaccatatgtaatatagtttgtgctagtcattgtgtaagcattttatatacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatactgagaaactacagctcagagaaacaaagtaaA---------CTGGGTTCCTACTTGAACCTAG-TTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t s panTro5.chr3 202015237 323 - 202621043 ----GTTTTTCCACGAATG-TTAGGCATTGGGCTG-AAATTACAATAGCTTTTCATGTCCAGTTTTGTTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatacagtttgtgctagtcattgtgtaagcattttatatacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagaaaaacaaagtaaA---------CTGAGTTCCTACTTGAACCTAG-TTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783262 323 - 205426864 ----GTTTTTCCACGAATG-TTAGGCATTGGGCTG-AAATTACAATAGCTTTTCATGTCCAGTTTTGTTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatacagtttgtgctagtcattgtgtaagcattttatacacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagaaaaacaaagtaaA---------CTGAGTTCCTACTTGAACCTAG-TTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13232 323 - 17846 ----GTTTTTCCACGAATG-TTAGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTTGTTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatatagtttgtgctagtcattgtgtaagcattttatatacattctctcattgacacatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagagaaacaaagtaaA---------CTGGGTTCCTACTTGAACCTAG-TTTTTATGTACTATGCATGGTTTCATATGTTTACTGa------t i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67599973 309 + 86207423 ----GTTTTTCCACGAATA-TTAGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTTGTTATAATCCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAG--CT--GTTACCataggagagtcaccatatgtaatatagtttgtgctagacattgtgtaagcattttatatacattctctcattgacatatttaacagcctgtgaagttcctattttattcccacctcacatattgagaaactacagctcagagaaacaaagtaaA---------CTGAGTTCTTACTTGAACCTAG-TTTTTATGTCCTATGCATGGGTTC-------------------- i nomLeu3.chr21 I 3 C 0 s rheMac8.chr2 66081224 322 + 204787373 ----ATTTTTCCATGAATA-TTGGGCATTGGGCTG-AAATTACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATAtagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaaA---------CTGAGCTCCTA-TTGAACCTAG-TTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013072 322 - 192460366 ----ATTTTTCCATGAATA-TTGGGCATTGGGCTG-AAATTACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATAtagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaaA---------CTGAGCTCCTA-TTGAACCTAG-TTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125313 323 - 17224310 ----ATTTTTCCATGAATA-TTGGGCATTGGGCTGAAAAATACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATATAGTTtatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaaA---------CTGAGCTCCTA-TTGAACCTAG-TTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437184 322 - 41321030 ----ATTTTTCCATGAATA-TTGGGCACTGGGCCA-AAATTACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATATAGTTtatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaaA---------CTGAGCTCCTA-TTGAACCTAG-TTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64508780 322 - 101219884 ----ATTTTTCCATGAATA-TTGGGCCTTGGGCTG-AAATTACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAA--CT--GTTACCataggagagtcaccatatgtaatatagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacatcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaaA---------CTGAGCTCCTA-TTGAACCTAG-TTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894606 380 - 924385 ----ATTTTTCCATGAATA-TTGGGCATTGGGCCG-AAATTACAATAGCCTTTCACGTCCAGTTTTATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAACTGTTACCATAGGAAAGATTACAATTCCATTAAGGCAACTGCAGAGATTGGTAAATAA--CT--GTTACCATAGGAAAGTCACCATATGTAATAtagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaagttcctgttttattcccatctcacatattgagaaactatagttcagagaaacaaagtaaA---------CTGAGCTCCTA-TTGAACCTAG-TTTTTATGTCCTATGCATGGGCTCATATGTTTACTGa------t i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735644 322 - 10587913 ----GTTTTTCCATGAATA-TTGGGCATTGGGCTG-AAATTACAATAGCCTTTCATGTCCAGTTTTGTTACAATCCCATTAAGGCA----------------------------------------------------------ACTGCAGAGATTGGTAAATAA--CT--GTTACCataggagagtcaccatatgtaatatagtttatgctagacattgtgtaagcattttacatacattcactcattgacacatttaacagcctgtgaaatttctgttttattcctatctcacatattgagaaactatagttcagagaaataaagtaaA---------CAGAGCTCCTA-TTGAACCTAG-TTTTTAAGTCCTACGCATGGGCTCATATGTTTACTGa------t i colAng1.NW_012114711v1 I 3 C 0 s calJac3.chr15 46070510 326 - 98464013 ----GTTTTCCCATGAATA-TTTGGCACTGGGCTG-AAATTACAATAGCCTGTCACGT-CAGTTTTGTTATAATTCCATTAAGGTA----------------------------------------------------------ACTACAGAGATTGGTAAATAA--CT--GTTACAACAGGagagtcaccatatgtaatataatttgttctagacattgtgtaagaattttatatacattctctcattgactcattt-acagcctgtgaag-tgttattttgttcccacctcacatatcgagaaaatacagctcagagaaactaagtaaA---------CTGAGTTCCTACTTGAACTTAG-TTTTTATATCCTATGCAGGGGCTCATATGTTTACTGATGTGTGT i calJac3.chr15 C 0 I 4 s saiBol1.JH378290 2555240 322 - 2763108 ----GTTTTCCCATAAATA-TTTGGCACTGGGCTG-AAATTACAATAGCTTTTCACGTCCAGTTTTGTTATAATTCCATTAAGGTA----------------------------------------------------------ACTACAGAGATTGGTAAATAA--CT--GTTACAACAGGagagtcaccatatgtaatataatttgttctagacattgtgtaagaattttatatacgttgtctcattgactcatttaatagcctgtgaag-tcttattttattcccacctcacatattgagaaactacagctcagagaaactaagtaaA---------CTGAGTTCCTACTTGAACCTAA-TTTTTAGGTCCTATGCAGGTGCTCCTATGTTTACTGA------T i saiBol1.JH378290 C 0 I 4 s cebCap1.NW_016107467v1 279626 322 - 4835464 ----GTTTTCCCGTGAATA-TTTGGCATTGGGCTG-AAATTACAATAGTCTTTCACGTCCAGTTTTGTTATAATTCCATTAAGGTA----------------------------------------------------------ACTAAAGAGATTGGTAAATAA--CT--GTTACAACAGGGGAGTCACCATGTGTAATATAATTtgttctagacattgtgtaagaattttatatacattgtctcattgactcatttaacagcctgtgaag-tcttattttattcccacctcacatattgacaaaatacagctcaaagaaactagataaA---------CTGAGTTCCTACTTGAACCTAG-TTTTTATGTCCTGTGCAGGGGCTCATATGTTTACTGA------T i cebCap1.NW_016107467v1 C 0 I 188 s aotNan1.NW_018502033v1 3745557 322 + 4093027 ----GTTTTCCCATGAATA-TTGGGCATTGGGTTG-AAATTACAACAGCCTTTCATGTCCAGTTTTGTTATAATTCCATTAAGGTA----------------------------------------------------------ACTACAGAGATTGGTAAATAA--CT--GTTACAACAGGagagtcaccatatgtaatataatttgttctagacattgtgtaagaatttcatatacattctctcattgactcatttaacagcctgtgaag-tcttattttattcccacctcacatactgagaaaatacagctcagagaaactaagtaaA---------CTGAGTTCCTACTTGAACCTAG-TTTTTATGTCCTATGCAGGGGCTCATATGTTTACTGA------T i aotNan1.NW_018502033v1 C 0 I 334 s otoGar3.GL873534 11082767 307 + 30473821 ----ATTTTATCCTAAGAG-GGGAGCACTGGGCTG-AAATGACCACAACCATTCGTGTTCTGTTCT------------------------------------------------------------------------------GTTATAGAGACTAGTAAGTAG--TT--GTTCCCatagaagagtgaccatatttagtgctctttgtgttagatattgtataagcatgctatatacagtaattcactgactcatttaataatctatacaggtcttattttacttccatct-gcatattgagaaactaaagctcagagaagttaagtaaataactgaagttaagtaaatagctgaaccTAT-TTTTGGTCTCCTATGCTTGGGCTCATATTTCAAA---------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617030 318 + 58134056 ----TTATTTCCATAAATA-TTGAATATTGAACTG-AAATAACATCAGCCTTTTATGTCCAGTTCTGCTACCCTCCCATTATGGCA----------------------------------------------------------ACTGCAGAGGTTAGTAAATGGTTCT--GTTTCTataggaaagtgaccatgtttgatatgctttatgctagaccttgtgtaaacattttaaatacattatctcactt-ctcttttaacagtctgtgaggtttataatttattcccatttcacaagtggagaaactaaaactaagaagaactgaataaT---------CAGGGTTCATATTTGAACCCTG-TTTTT--GATCTATTCTTAGACTCATGCTTCAAT---------- i canFam3.chr20 I 5 C 0 s dasNov3.JH563077 1872471 328 - 2187301 AATGTTATTTTCAAAAATAGTTGGGTTTTGGAATG-AAAT-ACATCAGCCTTTCATGACCAGTTCT-CTAAATTACTGTTATAGTG----------------------------------------------------------A-TAAAGAAATTGATAAATAG--CTCAGTTACCATAGGAATGTGGCCATATTTATTACactttgccctagacattgtttaagcattttatatacatgatcttgtttacatttttaacaacccatgatgttcacattttcttccattcccacatagtgagaaatcaaatgtcagagaaaatgaataaa---------cagagttcacaTTTGAACCCTGCTCTTTATTTCCTATGCTTGGGCTCATTGTTCAACTGA------C i dasNov3.JH563077 C 0 C 0 e nasLar1.chr2 57744107 386 + 181502896 I a score=64879.000000 s hg38.chr14_KI270725v1_random 21062 35 + 172810 atacatatataaaattttatt-tatatata--------------atatat s panTro5.chr3 202015560 35 - 202621043 atacatatataaaattttatt-tatatata--------------atatat i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783585 35 - 205426864 atacatatataaaattttatt-tatatata--------------atatat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13555 35 - 17846 atacatatataaaattttatt-tatatata--------------atatat i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600282 2 + 86207423 ------------------------------------------------AT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081546 43 + 204787373 atacatatataacgttttatt-catatatatata------aagtatatat i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013394 43 - 192460366 atacatatataacgttttatt-catatatatata------aagtatatat i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125636 43 - 17224310 atacatatataacgttttatt-catatatatata------aagtatatat i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437506 43 - 41321030 atacatatataacgttttatt-catatatatata------aagtatatat i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509102 36 - 101219884 atacatatataacgttttatt-cacatata-------------tatatat i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 894986 43 - 924385 atacatatataacgttttatt-catatatatata------aagtatatat i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6735966 49 - 10587913 ataaatatataacattttatt-catatatatacatatattaagtatatat i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070840 45 - 98464013 Gtatatatatatgtatttattatatgtatatata-----tttatttttat i calJac3.chr15 I 4 I 79 s saiBol1.JH378290 2555566 40 - 2763108 Gtatatatacatgtatttattttatatatatat----------tttttat i saiBol1.JH378290 I 4 I 218 s otoGar3.GL873534 11083074 18 + 30473821 AGACATGTGTGAAAATTC-------------------------------- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617348 14 + 58134056 GGACATATATAGTA------------------------------------ i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872799 8 - 2187301 ----AAATATAG-------------------------------------- i dasNov3.JH563077 C 0 C 0 e nasLar1.chr2 57744107 386 + 181502896 I e aotNan1.NW_018502033v1 3745879 334 + 4093027 I e cebCap1.NW_016107467v1 279948 188 - 4835464 I a score=165286.000000 s hg38.chr14_KI270725v1_random 21097 17 + 172810 tatatatataAAATAAA- s panTro5.chr3 202015595 17 - 202621043 tatatatataAAATAAA- i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783620 17 - 205426864 tatatatataAAATAAA- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13590 17 - 17846 tatatatataAAATAAA- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600284 17 + 86207423 TATATATATAAAATAAA- i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081589 17 + 204787373 tatatatataAAATAAA- i rheMac8.chr2 C 0 I 1 s macFas5.chr2 61013437 17 - 192460366 tatatatataAAATAAA- i macFas5.chr2 C 0 I 1 s macNem1.NW_012018021v1 11125679 17 - 17224310 tatatatataAAATAAA- i macNem1.NW_012018021v1 C 0 I 1 s cerAty1.NW_012009469v1 17437549 17 - 41321030 tatatatataAAATAAA- i cerAty1.NW_012009469v1 C 0 I 1 s chlSab2.chr22 64509138 17 - 101219884 tatatatataAAATAAA- i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012098965v1 895029 17 - 924385 tatatatataAAATAAA- i manLeu1.NW_012098965v1 C 0 I 1 s colAng1.NW_012114711v1 6736015 17 - 10587913 tatatatataAAAAAAC- i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070964 17 - 98464013 tatatatataAAATAAA- i calJac3.chr15 I 79 I 1 s saiBol1.JH378290 2555824 17 - 2763108 tatatatataAAATAAA- i saiBol1.JH378290 I 218 I 1 s cebCap1.NW_016107467v1 280136 17 - 4835464 tatatatatataataAA- i cebCap1.NW_016107467v1 I 188 I 1 s aotNan1.NW_018502033v1 3746213 17 + 4093027 tatatatataAAATAAA- i aotNan1.NW_018502033v1 I 334 I 1 s canFam3.chr20 16617362 3 + 58134056 --------------AAA- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872807 5 - 2187301 -------------TAAAC i dasNov3.JH563077 C 0 C 0 e nasLar1.chr2 57744107 386 + 181502896 I e otoGar3.GL873534 11083092 0 + 30473821 C a score=17100.000000 s hg38.chr14_KI270725v1_random 21114 1 + 172810 C s panTro5.chr3 202015612 1 - 202621043 C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783637 1 - 205426864 C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13607 1 - 17846 C i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600301 1 + 86207423 C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081607 1 + 204787373 C i rheMac8.chr2 I 1 C 0 s macFas5.chr2 61013455 1 - 192460366 C i macFas5.chr2 I 1 C 0 s macNem1.NW_012018021v1 11125697 1 - 17224310 C i macNem1.NW_012018021v1 I 1 C 0 s cerAty1.NW_012009469v1 17437567 1 - 41321030 C i cerAty1.NW_012009469v1 I 1 C 0 s chlSab2.chr22 64509156 1 - 101219884 C i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012098965v1 895047 1 - 924385 C i manLeu1.NW_012098965v1 I 1 C 0 s nasLar1.chr2 57744493 1 + 181502896 C i nasLar1.chr2 I 386 N 0 s colAng1.NW_012114711v1 6736032 1 - 10587913 C i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070982 1 - 98464013 C i calJac3.chr15 I 1 C 0 s saiBol1.JH378290 2555842 1 - 2763108 C i saiBol1.JH378290 I 1 C 0 s cebCap1.NW_016107467v1 280154 1 - 4835464 C i cebCap1.NW_016107467v1 I 1 C 0 s aotNan1.NW_018502033v1 3746231 1 + 4093027 C i aotNan1.NW_018502033v1 I 1 C 0 s canFam3.chr20 16617365 1 + 58134056 C i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872812 1 - 2187301 C i dasNov3.JH563077 C 0 C 0 e otoGar3.GL873534 11083092 0 + 30473821 C a score=1197419.000000 s hg38.chr14_KI270725v1_random 21115 98 + 172810 CATAAAGTCAGAAATTTAGAATGAAATTTAATATGACTATAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT s panTro5.chr3 202015613 98 - 202621043 CGTAAAGTCAGAAATTTAGAATGAAATTTAATATGAGTATAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783638 98 - 205426864 CGTAAAGTCAGAAATTTAGAATGAAATTTAATATGAGTATAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13608 97 - 17846 CGTAAAGTCAGAAATTTAGAATGAAATTT-ATATGAGTATAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600302 98 + 86207423 CCTAAAGTCAGAAATTTAGAATGAAATTTAATATGAGTATAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081608 98 + 204787373 CCTAAAGTCAGAAATTTAGAATGCAATTTAATATGAGTATAATT----T--------ATTTGTTGATTCCAAGATAGGCATCTATATTTTCGCAACATTAAAATAAAGAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013456 98 - 192460366 CCTAAAGTCAGAAATTTAGAATGCAATTTAATATGAGTATAATT----T--------ATTTGTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125698 98 - 17224310 CCTAAAGTCAGAAATTTAGAATGCAATTTAATATGAGTATAATT----T--------ATTTGTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437568 98 - 41321030 CCTAAAGTCAGAAATTTAGAATGCAATTTAATATGAGTATAATT----T--------ATCTGTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i cerAty1.NW_012009469v1 C 0 I 312 s chlSab2.chr22 64509157 98 - 101219884 CCTAAAGTCAGAAATTTAGAATGTAATTTAATATGAGTATAATT----T--------ATTTGTTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895048 98 - 924385 CCTAAAGTCAGAAATTTAGAATGCAATTTAGTATGAGTATAATT----T--------ATTTGTTGATTCCAAGATAGGCATCTGTATTTTCCCAACATTAAAATAAAGAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736033 98 - 10587913 CCTAAAGTCAGAAATTTAGAATGCAATTTAATATGAGTATAATT----T--------ATTTGTTGATTCCAAGATAGGCATCTGTATTTTCCCAACATTAAAATAAAGAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46070983 98 - 98464013 CCTAAAGTCAGACATTTAGAATGAAATTTAACATGAGTACAATT----T--------ATTTGCTGATTCCAAGATAGCCATCTATATTTTCCCAACATTAAAATAAAGAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555843 98 - 2763108 CCTAAAGTCAGACATTTAGAATGAAATTTAACATGAGGACAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCTCAACATTAAAATAAAGAT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280155 98 - 4835464 CCTAAAGTCAGACATTTAGAATGAAATTTAACATGAGTGCAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746232 98 + 4093027 CCTAAAGTCAGACATTTAGAATGAAATTTAACATGAGTACAATT----T--------ATTTGCTGATTCCAAGATAGGCATCTATATTTTCCCAACATTAAAATAAAGAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11083092 94 + 30473821 --TCAAGTGAGGAATTTGGAAT----TTTGACATACTCATAATTTATGT--------ATTTGCTGATTCGAAG--AGGTCTCTCTGTTTTCCCCAGGTTAAGATAAAGTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617366 90 + 58134056 TCTAACGTGAGAAAATCGGAAT----TTTATCATAAGCATAATT----T--------ATTTGCTGATTTCAAAATAGGCATCTGTATTTTTCCATCATTATGATTC---- i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872813 102 - 2187301 TCTCAAGTCAGAAATATTGAAC----TTTAATATGGGCCAAATT----TTTTTTTCATTTTGCTGATTCCAAGAAAGGCCTATCTATTTTACCAACATTAACATAAAGGT i dasNov3.JH563077 C 0 C 0 a score=919374.000000 s hg38.chr14_KI270725v1_random 21213 71 + 172810 CATCTGGACAATCTTCTAACCAACTCCGAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT s panTro5.chr3 202015711 71 - 202621043 CGTCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCGGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783736 71 - 205426864 CGTCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCGGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13705 71 - 17846 CATCTGGACAATCTTCTAACCAACTCCGAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTGTCCTACTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600400 71 + 86207423 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTTCTACTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081706 71 + 204787373 CATCTGGACAATCTTTTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013554 71 - 192460366 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125796 71 - 17224310 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17437978 71 - 41321030 cATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i cerAty1.NW_012009469v1 I 312 C 0 s chlSab2.chr22 64509255 71 - 101219884 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895146 71 - 924385 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736131 71 - 10587913 CATCTGGACAATCTTCTAACCAACTCCAAACAGTTCTTTCTGGAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071081 71 - 98464013 CATTGGGACAATCTTCTAACCAACTCAAAACAGTTCTTTCTGAAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2555941 71 - 2763108 CATCGGGACAATCTTCTAACTAACTCAAAACGGTTCTTTCTGAAGTTTTTCTCCTTTTAT---------------------TTCTCCTATTT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280253 71 - 4835464 CATTGGGACAATCTTCGAACCAACTCAAAACAGTTCTTTCTGAAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746330 71 + 4093027 CATCGGGACAATCTTCTAACCAACTCAAAACAGTTCTTTCTGAAGTTTTTCTCCTTTTAT---------------------TTCTCCTACTT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11083186 92 + 30473821 CATCTGAGCAGTCTTTCAAACGGCTCCAAACAGTGGTTTTTGGAGTATTTCTCTTTTTATTTGTTTTAGTTGAAGAGGTAATTCTCCAACTT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16617456 70 + 58134056 CATCCAGATA-TTTTACAACCAGCTCCAAAAGGTGGTTTCTGGAGTTTTTCTCCTTATAT---------------------TTCTCCCACAT i canFam3.chr20 C 0 C 0 s dasNov3.JH563077 1872915 70 - 2187301 TATCTAGACAGTCCTCTAACCAGATCCAAACAGTAATATTTGGAGTTTTTCTC-TTTGAT---------------------TTCCCCTCTTT i dasNov3.JH563077 C 0 N 0 a score=2140324.000000 s hg38.chr14_KI270725v1_random 21284 193 + 172810 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAAGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAATTACCAAGCTAACTGGAGGTTTCCTCCATTCATGGGCATACTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT s panTro5.chr3 202015782 193 - 202621043 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTGAAATAAAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAATTACAAAGCTAACTGGAGGTTTCCTCCATTGATGGGCATGCTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204783807 193 - 205426864 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTGAAATAAAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAATTACCAAGCTAACTGGAGGTTTCCTCCATTGATGGGCATGCTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13776 193 - 17846 GGAGT---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAGAAGCTAATTAATTACCAAGCTAACTGGAGGATTCCTCCATTCATGGGCATACTGGAATTGCAAAATCTAGTTGTGAGCATAGAATAATATCTAT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600471 193 + 86207423 GGAGC---TGTAGGAGAAATCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATTAGCAGCTTGGACATTTCACAAAAAAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCCTCCATTCATGGGCATACTGGAATTGCAAAATCTAGTTGTGAGCATAGAGTAATATCTAT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081777 192 + 204787373 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAAGAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCAGAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013625 192 - 192460366 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11125867 192 - 17224310 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438049 188 - 41321030 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAAT----AAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCGTCCATTCATGTGCATCATGGAATTGCAAAATCTCGTTATAAGCATAGAATAATATCTAT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509326 192 - 101219884 GGAGT---TGTAGGTG-TGTCTGTGTCTCACAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGTTACCAAGCTAAGTGGAGGTTTCGTTCATTCTTGGGCATACTGGAATTGCAAAATCTCGTTATGAGCATAGAATAATATCTAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895217 192 - 924385 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGTTTTCGTCCATTCATGTGCATACTGGAATTGCAAAATCTCATTATAAGCATAGAATAATATCTAT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736202 192 - 10587913 GGAGT---TGTAGGTG-TGTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTTAAAATAAAAGGACAGAAATGAGCAGCTTGGAGAGTTCACAAAAGAAACTAATTAGTTACCAAGCTAACTGGAGGTTTCGTCCATTCATGGGCATACTGAAATTGCAAAATCTCATTATGAACATAGAATAATGTCTAT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071152 192 - 98464013 GAAGT---TGTAGGTG-CTTCTGTGTCTCATAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAATAAAAGGACAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCCTGCATTCCTGGGCATACTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAC i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556012 191 - 2763108 GGAGT---TGTAGGTG-CTTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAAT-AAAGGACAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCCTGCATTCCTGGGCATATTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280324 192 - 4835464 GGAGT---TGTAGGTG-CTTCTGTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAATAAAAGGATAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTAGAGGTTTCCTGCATTCCTGGGCATATTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAT i cebCap1.NW_016107467v1 C 0 C 0 s aotNan1.NW_018502033v1 3746401 192 + 4093027 GGAGT---TGTAGGTG-CTTCTCTGTCTCAGAGAAATAAACAAAAGGTGTTCT-----------------ATTTCAAAATAAAAGGACAAAAATGAACAGCTTGGAGATTTCACAAAAGAAGCTAATTAGTTACCAAGCTAACTGGAGGTTTCCTGCATTCCTGGGCATATTGGGATTGCAAAATCTAGTTATAGGCATAGAATAATGTCTAT i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11083278 191 + 30473821 AGACT---TGTAGGTG-TTTCTGTGTCTCAGAAAAGTAAACAAAAGGTGTT-T-----------------ATCTCAGGATAAAAGGACAGAAATGACCAGTTTGGAGATCCCACCAAAAATGTTAATTATTTGCCAAGCTAACTGGAAGTCTGCTGTATTCAGAGGCATGTTGGAATTCCTAAATGTAGGTATGGGCATAGAATAATGTGTAT i otoGar3.GL873534 C 0 I 245 s canFam3.chr20 16617526 210 + 58134056 GGTCTTAATGTAGTTG-TTTCTGTGTTT--GACAAATAAACAAAAAGTTTTTTTTTTGTTGTTGTTGTTAATCTCCAAATAAAAGGAAAGATGTGACCAGCTTGGGGGGGTCCACAAAAAAGCTAATTAGTTTCAGAGCAAAATGGAAGTTTGCTATATTCATGAACACATTCAAATTGTGAAACCGAGTTAGGGGCATAAAATAGTATCTAT i canFam3.chr20 C 0 C 0 a score=5167116.000000 s hg38.chr14_KI270725v1_random 21477 429 + 172810 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAATATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAACTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACCAGAGCAGATGGGGCTCTAAG--TTGTACCAGCCTGTGCCGTTCTTAGGGGGAACAATTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATAGTATAATTTAACAAACAGCAGAGAGTGTGACCATTCAGACTGCTTTTTCCT s panTro5.chr3 202015975 429 - 202621043 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAATATCAGTAACAAAT--ATTTTATAACATCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACCAGAGCAGATGGGGCTCTAAG--TTGTACCAGCCTGTGCCGTTCTTAGGGGGAACAATTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATAGTATAATTTAACAAACAACAGAGAGTGTGACCATTCAGACTGCTTTTTCCT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784000 429 - 205426864 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAATATCAGTAACAAAT--ATTTTATAACATCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACCAGAGCAGATGGGGCTCTAAG--TTGTACCAGCCTGTGCCGTTCTTAGGGGGAACAATTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATAGTATAATTTAACAAACAACAGAGAGTGTGACCATTCAGACTGCTTTTTCCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 13969 429 - 17846 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAATATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAACTCCCTTATGCCATTAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTT-AAAAATGGGCACATTATGCA-TGTGAATGCTATCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACCAGAGCAGATGGGGCTCTAAG--TTGTACCAGCCTGTGCCATTCTTAGGGGGAACAATTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGAGAAGGATAGTATAATTTAACAAACAACAGAGAGTGTGACCATTCAGACTGCTTTTTCCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67600664 431 + 86207423 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAATATCACTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCTTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAAACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTTGCTCTCTACTAATTAACGTAATGTGGCAGTATCCAACAAACCAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTGTGCCATTCTTAAGGGGAACAATTTTTGTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATGGTATAATTTAACAAACAACAGACAGTGTGACCATTCAGACTGCTTTTTCCT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66081969 431 + 204787373 AAAAAGTCTTTAAGACAGCATGAAAAAC--ATAGC-ATAATACCAGTAACAAAT--ATTTTATAATCTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTATGCCGTTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61013817 431 - 192460366 AAAAAGTCTTTAAGACAGCATGAAAAAC--ATAGC-ATAATACCAGTAACAAAT--ATTTTATAATCTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTATGCCGTTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126059 431 - 17224310 AAAAAGTCTTTAAGACAGCATGAAAAAC--ATAGC-ATAATACCAGTAACAAAT--ATTTTATAATCTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTATGCCGTTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438237 431 - 41321030 AAAAAGTCTTTAAGACAGCATGAAAAAC--ATAGC-ATAATACCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTAATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTATGCCGTTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTTGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509518 431 - 101219884 AAAAAGTCTTTAAGACAGCATGAAAAAC--ATAGC-ATAATACCAGTAACAAAT--ATTTTATAATGTCTAAAATTGTATAATTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TGTGAACGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTATGCCATTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895409 427 - 924385 AAAAAGTCTTTAAGACAGCATGAAAAAC----AGC-ATAATACCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGTCA-TAATTTGGCTGTA-----TA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGTTTTTGAAAAATGGGCACATTATGCA-TATGAATGCTCTCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGGGCTCTAAGTCTTGTACCAGCCTATGCTGTTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736394 431 - 10587913 AAAAAGTCTTTAAGACAGTATGAAAAAC--ATAGC-ATAATACCAGTAGCAAAT--GTTTTATAATGTCTAAAATTTTATAACTTCTTTTATCTA-T-TTTCTTAAAGCTCCCTTATGCCA-TAATTTGGCTGTAT---TTA---TGTGATAAACACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAAGCAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCGCTCTCTACTAATTAATGTAATGTGGCAGTATCCAACAAACTAGAGCAGATGGAGCTCTAAGTCTTGTACCAGCCTATGCCATTCTTAAGGGGAACAATTTTTCTTCACAT--CTCTAAATAAAGAGAGTGAGATTTCGGGAAGGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071344 431 - 98464013 AAAAAGTCTTTAAGATAGCATGAAAAAC--GTAGC-ATAATATCAGTAACAAAT--ATTTTATAATGTCTACAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCTA-TAATTTGGCTATAT---TTA---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGAGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATTAATGTAATGTGGCAACATCCAACTAACTAGAGCAGATGGGGCTCTAAGTCTTATACCAGCCTATGCCATTCTTAAGGAAAAAAATTTTTGTTCACAT--CTCTGAATAAAGAGAGTGAGATTTTGGGAAGGATGACATAATTTAACAAGCAATAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556203 426 - 2763108 AAAAAGTCTTTAAGATAGCATGAAGAAC--ATAGC-ATAATATCAGTAACAAAT--ATTTTACAATATCTAAAATTTTATAACTTT-----TCTA-T-TTTCTTAAAGCTCCCTTATGCTA-TAATTTGGCTATAT---TTA---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCCTGTAAAATATGCTTTTGAAAAATGGGCACATTATGTA-TGTGAATGCTCTCTCTTTACTAATTAATGTAATGTGGCAGCATCCAACTAACTAGAGCAGATGGGGCTCTAAGTCTTATACCAGCCTATGCCATTCTTAAGGAAAAAAATTTTTGTTCACAT--ATCTGAATAAAGAGAGTGAGATTTCGGGAAGGATGACATAATTTAACAAACAACAGAAAGTGTGACCATTCAGATTGCCTTTTCCT i saiBol1.JH378290 C 0 C 0 s cebCap1.NW_016107467v1 280516 431 - 4835464 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAATATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATGACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTTATGCTA-TAATTTGGCTATAT---TTA---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATTAATGTAATGTGGCAGCATCCAACTAACTAGAGCAGATGGGGCTCTAAGTCTTATACCAGCCTATGTCATTCTTAAGGAAAAAAATTTTTGTTCACAT--CTCTGAATAAAGAGAGTGAGATTTCGGGGAGGATGACATAATTTAACGAACAACAGAGAGTGTGACCATTCAGATTGCCTTTTCCT i cebCap1.NW_016107467v1 C 0 N 0 s aotNan1.NW_018502033v1 3746593 430 + 4093027 AAAAAGTCTTTAAGATAGCATGAAAAAC--ATAGC-ATAGTATCAGTAACAAAT--ATTTTATAATGTCTAAAATTTTATAACTTCTTTTGTCTA-T-TTTCTTAAAGCTCCCTCATGCTA-TAATTTGGCTATAT---TTG---TGTGATAATCACACTCTTATCTTTGTAATGAATTTTTAAGGAAAAGACAGAACCATGTAAAATATGCTTTTGAAAAATGGGCACATTATGCA-TGTGAATGCTCTCTCTTTACTAATTAGTGTAATGTGGCAGCATCCAACTAACTAGAGCAGATGGGGCTCTAAGTCTTATACCAGCCTATGCCATTCTTAAGGAAAAAAATTTTTGTTCACAT--CTCTGAATAAAGAGAGTGAGATTTCGGGAAGGATGACATAATTTAACAAACAACAGAGCGTGTGACCATTCAGATTGCCTTTCCT- i aotNan1.NW_018502033v1 C 0 C 0 s otoGar3.GL873534 11083714 440 + 30473821 aaaaaGTCCTTAAGATAGTGTAAAAAACTTTTATC-ATATTACTTGCAGCAGATAGATTTCATAATGTTTAAAATGTTATAACTACTTTCGTCTGTT-TTTCTTCAAGTCTCCTTACACCG-TAATTTGGCTATAT---TTGTTTTATGATAATCGCACTCTTACCCTGATAATGAATTTCTAAAGGGAGGACGGAATCATGTAAATTATGCCTTTGGAAACTGGGCGCATTATGCA-CGGGAATGCTCCCTCTTCGCTGATGGATGGAACGTGGCAGCACCAACTAAACCAGAGCAGATGGGGCTCCACGT-CTGCGCCAGTTCATGCCACGCTTAAGGAGAACCGTTTTTGCTCAAATAACTTCAAGTAAAAAGAGTAAGATTTGGGGAAAGATGGCATAATTTAACAAACAACAGAGAGTGTGACCATCCAGATGGCCTTTTCCT i otoGar3.GL873534 I 245 C 0 s canFam3.chr20 16617736 421 + 58134056 AAAAAGTCTTTAAGATAGCACAAAACTT--TTTACAATGCTAACAGTAAGAAATAGATTTTATAATGCCTAAAATCTTATAACTACTTCTGTCTA-CATTTTTTAAACTTCCTTTATGCCA-TAATTTGGCTTTATTTGTTA---TATGATAATCAAACTCTTATCTTTGTAATGAATTTTTAATGAAAAGACA------TGCAAAATATGCCCATGGAAAGTGGGCACATTATATGTTGTGGATGCTGTCTCTTGATGAATTAGCATGCTGTGGCAGTATGCAACTCCTC----TAGATGGGGCTCTGAGCCTTGAACCAGCCTATTCTATTCTTAAGGGGAGTCATTTGTGTTTCCTT--ACTTAAATAAAGTGAGTG-GATTCAGGTAATAATGGCATAATTTAAC-------AGAGAGTGTAACCATTCTGAGGGCCTTTTCCT i canFam3.chr20 C 0 C 0 a score=446505.000000 s hg38.chr14_KI270725v1_random 21906 50 + 172810 GTCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGATGA-AGCAATAG----AAAGT s panTro5.chr3 202016404 50 - 202621043 GTCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGAtga-agcaatag----aaagt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784429 50 - 205426864 GTCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGAtga-agcaatag----aaagt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14398 50 - 17846 GTCAACCACTTG-AATGCAAAAC----CTGTTTCAGAGAtga-agcaatag----aaagt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601095 51 + 86207423 ATCAACCACTTGCAATGCAAAAC----CTTTTTCAGAGATGA-AGCAATAG----AAAGT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082400 51 + 204787373 ATCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGATGA-AGCAATAG----AAAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014248 51 - 192460366 ATCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGATGA-AGCAATAG----AAAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126490 51 - 17224310 ATCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGAtga-agcaatag----aaagt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438668 51 - 41321030 ATCAACCACTTGCAAGGCAGAAC----CTGTTTCAAAGAtga-agcaatag----aaagt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64509949 51 - 101219884 ATCAACCACTTGCAAGGCAGAAC----CTGTTTCAGAGATGA-AGCAATAG----AAAGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895836 51 - 924385 ATCAACCACTTGCAAGGCAGAAC----CTGTTTCAAAGAtga-agcaatag----aaagt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736825 51 - 10587913 ATCAACCGCTTGCAAGGCAAAAC----TTGTTTCAGAGAtga-agcaatag----aaagt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071775 51 - 98464013 ATGCACCATTTGCAATGCAAAAC----CTGCTTCAGGGATGA-AGGAATAG----AGAGT i calJac3.chr15 C 0 C 0 s saiBol1.JH378290 2556629 51 - 2763108 ATCCACCATTTGCATTGCAAAAC----CTGCTTCATAGATGA-AGCTATAG----AGAGT i saiBol1.JH378290 C 0 C 0 s aotNan1.NW_018502033v1 3747023 51 + 4093027 AACCACCATTTGCATTGCAAAAC----CTGCTTCAGGGATGA-AGCAATAG----AGAGT i aotNan1.NW_018502033v1 C 0 N 0 s otoGar3.GL873534 11084154 59 + 30473821 GTCAACTATTGGCAATGCAAAACCTTACTGTTTCAGGAATGA-GGCAATCGATACAGAGT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618157 54 + 58134056 ATTGACTATTTGCAACACAAAGCCTCACTGTTTGAGGAGTGACCGTAATAG----AGT-- i canFam3.chr20 C 0 C 0 a score=19243.000000 s hg38.chr14_KI270725v1_random 21956 2 + 172810 GT s panTro5.chr3 202016454 2 - 202621043 gt i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784479 2 - 205426864 gt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14448 2 - 17846 gt i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601146 2 + 86207423 GT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082451 2 + 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014299 2 - 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126541 2 - 17224310 gt i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438719 2 - 41321030 gt i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510000 2 - 101219884 GT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895887 2 - 924385 gt i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736876 2 - 10587913 gt i colAng1.NW_012114711v1 C 0 C 0 s calJac3.chr15 46071826 2 - 98464013 AT i calJac3.chr15 C 0 N 0 s saiBol1.JH378290 2556680 2 - 2763108 AT i saiBol1.JH378290 C 0 N 0 s otoGar3.GL873534 11084213 2 + 30473821 GT i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618211 2 + 58134056 Gt i canFam3.chr20 C 0 C 0 a score=2657277.000000 s hg38.chr14_KI270725v1_random 21958 394 + 172810 TGGAAG-CAAGACAGATACGAGTTGGAATCCCAACCATTGCCATGGGTGACCACTAAAcctcagcttcctcatcggcagtatggggataaccatagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTATGACTGCACAATTAATGCTGCTTCTAGTACCACTACAACTGCTGCTATT-----CTATTACTATCAGTGCCTCTA-------------TTACTATCAG-----AGCCACAGAGCTCTAGCTTATAAGCCCATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTAGGTAAGTGCTTTCTC---TATTTCAATTTT s panTro5.chr3 202016456 394 - 202621043 tggaag-caagacagatatgagttggaatcccaaccattgccatgggtgaccactaaacctcagcttcctcatcggcagtatggggataaccatagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTATGAGTGCACAATTAATGctgcttctactaccattacaactgctgctatt-----ctattactatcagtgcctcta-------------ttactaTCAG-----AGCCACAGAGCTCTAGCTTACAAGCCCATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTAGGCAAGTGCTTTCTC---TATTTCAATTTT i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784481 394 - 205426864 tggaag-caagacagatatgagttggaatcccaaccattgccatgggtgaccactaaacctcagcttcctcatcggcagtatggggataaccatagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTATGAGTGCACAATTAATGctgcttctactaccattacaactgctgctatt-----ctattactatcagtgcctcta-------------ttactaTCAG-----AGCCACAGAGCTCTAGCTTACAAGCCCATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTAGGCAAGTGCTTTCTC---TATTTCAATTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14450 393 - 17846 tggaag-caagacagatatgagttggaatcccaaccattgccatgggtgaccactaaacctcagcttcctcatcggcagtatggggataaccatagtagcaaacatttctaaaggtaattgtgagaagta-TTTTATGACTGCACAATTAATGctgcttctactaccactacaactgctgctatt-----ctattactatcagtgcctcta-------------ttactaTCAG-----AGCCACAGAGCTCTAGCTTATAAGCCCATCTATTCATTTATAGACTGACATGATCATTTTTGCACATTCTCATTGCCTCCCATTTCTACCTTCTATAACTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTACGTAAGTGCTTTCTC---TATTTCAATTTT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601148 394 + 86207423 TGGAAG-CAAGACAGGTATGAGCTGGAATCCCAACCATTGCCATGGGTGACCACTAAAcctcagcttcctcatcagcagtatggggataaccatagtagcaaacatttctaaaggtaattgtgagaagtaCTTTTAAGAGTGCACAATTAATGTTGCTTCTACTACCATTACAACTGCTGCTATT-----CTATTACCATTAGTGCCTCTA-------------TTACTATCAG-----AGCCACAGAACTCTAGCTTATAAGCCCATCTATTCATTTCTAGACTGACATGATCATTTTTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTATCTTATCCTGCAAATCACTACC----TAATTATATGTCAATATTCTGTTTTGAACGCTATGCAAGTGCTTTCTG---TATTTCAATTTT i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082453 394 + 204787373 TGGAAG-CAAGACAGATATGAGTTGGAATCCCAACCATTGCCACGGGCGACCActaaacctcagcttcctcattggcagtatggggataaccatggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTAGCTTATAAACCCATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTGCTTTCTC---TACTTCAATTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014301 394 - 192460366 TGGAAG-CAAGACAGATATGAGTTGGAATCCCAACCATTGCCACGGGCGACCActaaacctcagcttcctcattggcagtatggggataaccatggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTAGCTTATAAACCCATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTGCTTTCTC---TACTTCAATTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126543 394 - 17224310 tggaag-caagacagatatgagttggaatcccaaccattgccacgggcgaccactaaacctcagcttcctcattggcagtatggggataaccatggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTAGCTTATAAACCCATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTGCTTTCTC---TACTTCAATTTT i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17438721 393 - 41321030 tggaag-c-agacagatatgagttggaatcccaaccattgccacgggcgaccactaaacctcagcttcctcatcggcagtatggggataaccatggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCTGCATctactactattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTAGCTTATAAACCCATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACGCTATGCAAGTGCTTTCTC---TACTTCAATTTT i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510002 395 - 101219884 TGGAAGCCAAGACAGATATGAGTTGGAATCCCAACCATTGCCACGGGCGACCActaaacctcagcttcctcatcggcagtatggggataaccatggtagcaaatatttctaaaggtacttgtgagaaGTGCTTTTATGAGTGCAAAATTAATGCTGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTAGCTTATAAACCCATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTGCTTTCTC---TACTTCAATTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 895889 394 - 924385 tggaag-caagacagatatgagttggaatcccaaccattgccacgggccatcactaaacctcagcttcctcatcggcagtatggggataaccatggtagcaaatatttctaaaggtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGCCGCGTctactaccattacaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACAGAGCTCTAGCTTATAAACCCATCTATTCACTTCTAGACTGACATGATCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACGCTATGCAAGTGCTTTCTC---TACTTCAATTTT i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6736878 394 - 10587913 tggaag-caagatagatatgagttggaatcccgaccattgccacgggcgaccactaaacctcagcttcctcatcagcagtatggggataaccatggtagcaaatatttctaaaagtactcgtgagaaGTGCTTTTATGAGTGCACAATTAATGctgcttctactaccattaaaactgctgctatt-----ctattactatcagtacctcta-------------ctactaTCAG-----AGCCACACAGCTCTAGCTTATAAACCCATCTATTCATTTCTAGACTGACATGCTCATTTCTGCATATTCTCATTGCCTCCCATTTCTACCTTCTCTAACTTATCCTGTAAATCGCTACC----TAATTATATGTCAATATTCTGTTTTGAACTCTATGCAAGTGCTTTCTC---TACTTCAATTTT i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11084215 394 + 30473821 TTGAAG-AAACACAGATAAGATTCGGAATTCCCA-CATTGCCAGGGGTGACCGCTAACcctcggtttcctcatcaggagagtggggatgaccacagtaacagtcatttcctagtgttcttgtgagaaGTG---ATACAGGTTCTCAGTAAGTGCTCATTCTCCTGCCATAACAACGCCTGCTACGTC-CACTATGACTGTCAGTGCCTCTGT------------TTCCTACCTGTTGCCGGGCACAGGGCTGCAGTCCATAACCTCGTCTG-CCACATCTAGACTGATGCCGTCATTCCTGCATGGCCTCATTGCCTCCTGTTTCTA-----TCAGATTTTTCCTACAAACCACTACC----GAATTATAGGTTAATATTCTGTTTGGAACTTCAAGCAAGTACTTTTCC---TATTTTAACTTA i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618213 410 + 58134056 -tgaag-taagacaagcgcagggtggagtcttgatt-ctaccttgggaagccactaaacctcagtttcctcatctgtaaaatgtgaataatgatagtagcaatggtgtgaaagggttcttttgaggagta---atatgagtgcacaataaatgCTGCTTCTATAGTTATTACTACTGCTGCTGCTACTCCTTCCTCCTGTTAGCACCTCTATTTCTTATTCCCATTATTCCCAG-----GTTCACA--GTTCTAGTTAATAATCTCCTCGATTCATGACTACATTAACATGGTCATCCCTGCATA--CTCATTGTCTCCCATCTCTACTTCCTTTAATGTATCCTGAAAATCACTGCCTGATTGATTACATGTAAAGATTGTATTTTGAACTCTAAGCAACTTATTTCTCtttttttttaatttt i canFam3.chr20 C 0 I 236 a score=525191.000000 s hg38.chr14_KI270725v1_random 22352 88 + 172810 AAAAAAGAAATTCTTGCTCCAAGTCAGTGATTCTCCACCAGGGATAACTGTAATGTACAGAGAACCTTTAGTAATGTCTGAAAAAAG--C s panTro5.chr3 202016850 88 - 202621043 TAAAAAGAAATTCTTGCTCCAAGTCAGTGATTCTCCACCAGGGATAATTGTAATGTACAGAGGACCTTTAGTAAAGTCTGAAAAAAG--C i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784875 88 - 205426864 AAAAAAGAAATTCTTGCTCCAAGTcagtgattctccaccagggataattgtaatgtacagaggacctttagtaatgtctgaaaaAAG--C i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14843 88 - 17846 AAAAAAGAAATTCTTGCTCCAAGTCAGTGATTCTCCACCAGGGATAATTGTAAAGTACAGAGAACCTTTAGTAATGTCTGAAAAAAG--C i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601542 88 + 86207423 AGAAAAGAAATTCTTGCCCCAAACcagtgattctccaccagggataattgtaatgtacagaagacctttagtaatgtctgaaaaAAG--C i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082847 88 + 204787373 AAAAAATAAATTCTTGCTCCAAGTCATTGATTCTCAACCAGAGATAACTGTAATGTACAGAGGACCTTTAGTAATGTCTGAAAAAAG--C i rheMac8.chr2 C 0 C 0 s macFas5.chr2 61014695 88 - 192460366 AAAAAATAAATTCTTGCTCCAAGTCATTGATTCTCAACCAGAGATAACTGTAATGTACAGAGGACCTTTAGTAATGTCTGAAAAAAG--C i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11126937 88 - 17224310 AAAAAATAAATTCTTGCTCCAAGTCATTGATTCTCAACCAGAGATAACTGTAATGTACAGAGGACCTTTAGTAATGTCTGAAAAAAG--C i macNem1.NW_012018021v1 C 0 C 0 s cerAty1.NW_012009469v1 17439114 88 - 41321030 AAAAAATAAATTCTTGCTCCAAGTcagtgattctcaaccagagataattgtaatgtacagaggacctttagtaatgtctgaaaaAAG--C i cerAty1.NW_012009469v1 C 0 C 0 s chlSab2.chr22 64510397 88 - 101219884 AAAAAATAAATTCTTGCTCCAAGTCAGTGATTCTCAACCAGAGATAACTGTAATGTACAGAGGACCTTTAGTAATGTCTGAAAAAAG--C i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896283 88 - 924385 AAAAAATAAATTCTTGCTCCAAGTcagtgattctcaaccagagataactgtaatgtacagaggacctttagtaatgtctgaaaaAAG--C i manLeu1.NW_012098965v1 C 0 C 0 s colAng1.NW_012114711v1 6737272 88 - 10587913 AAAAAAGAAATTCTTGCTCCAAGTcagtgattctcaactagagataattgtaatgtacagaggacctttagtaatgtctgaaaaAAG--C i colAng1.NW_012114711v1 C 0 C 0 s otoGar3.GL873534 11084609 90 + 30473821 TAAACAGAAATCTATGTTGCAAGTCTGTGGTGCTCAAGTAGGAGTTATTTTAACTAGCAGGGGACTGTTAGcagtgtctttaaggggaca i otoGar3.GL873534 C 0 C 0 e canFam3.chr20 16618623 236 + 58134056 I a score=935433.000000 s hg38.chr14_KI270725v1_random 22440 136 + 172810 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagaggtaca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---aGACTCCTCTTG s panTro5.chr3 202016938 136 - 202621043 atcttgacccacagaggacatttagcaacatctagacg-cactttcggctgtcacaactagaggtgca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i panTro5.chr3 C 0 C 0 s panPan2.chr3 204784963 136 - 205426864 AACttgacccacagaggacatttagcaacatctagacg-cactttcggctgtcacaactagaggtgca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01007532v1 14931 136 - 17846 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagaggtaca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctataattc---aGACTCCTCTTG i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601630 136 + 86207423 atcttgacccacagaggacattcagcaacatctagatg-cacttttggctgtcacaactagaggtaca---ggtactattggcatctagagatagaggccagggaagcttctaaacatcctacaattc---agactcctcttg i nomLeu3.chr21 C 0 C 0 s rheMac8.chr2 66082935 136 + 204787373 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i rheMac8.chr2 C 0 N 0 s macFas5.chr2 61014783 136 - 192460366 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactactggcacttagagacagaggccagggaagcttctaaacatcctataattc---agactcctcttg i macFas5.chr2 C 0 C 0 s macNem1.NW_012018021v1 11127025 136 - 17224310 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i macNem1.NW_012018021v1 C 0 N 0 s cerAty1.NW_012009469v1 17439202 136 - 41321030 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i cerAty1.NW_012009469v1 C 0 N 0 s chlSab2.chr22 64510485 136 - 101219884 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaagtagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012098965v1 896371 136 - 924385 atcttgacccacagaggacatttagcaacatctagatg-cacttttggctgtcacaactagagggaaa---ggtactattggcgcttagagatagaggccagggaagcttctaaacatcctataattc---agactcctcttg i manLeu1.NW_012098965v1 C 0 N 0 s colAng1.NW_012114711v1 6737360 136 - 10587913 atcttgacccacagaggacatttagcaacatctagatg-aacttttagctgtcacaactagaggtaaa---ggtactattggtgcctagagatagaggccagggaagcttctaaacatcctataaatc---agactcctcttg i colAng1.NW_012114711v1 C 0 N 0 s otoGar3.GL873534 11084699 133 + 30473821 gttttaacccaaagggga-agttagcactgtctggagg-catttttggttttcac-actag-gctgca---gatactattggcatctagtgacagaggccagagaagctgctaagtatcctgtaaacc---agaaggttccca i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618859 140 + 58134056 attttaacccacagaagacatttgataatgtctgggggaaaattctggttgtcacaat--gaggaaaatggggtgctactggcatccagtgatagaggccag-gaagctgctaaacatcgtacaatgccctggattcctccca i canFam3.chr20 I 236 C 0 a score=8452.000000 s hg38.chr14_KI270725v1_random 22576 3 + 172810 CCT s panTro5.chr3 202017074 3 - 202621043 cct i panTro5.chr3 C 0 N 0 s panPan2.chr3 204785099 3 - 205426864 cct i panPan2.chr3 C 0 N 0 s gorGor5.CYUI01007532v1 15067 3 - 17846 CCT i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601766 3 + 86207423 cct i nomLeu3.chr21 C 0 C 0 s macFas5.chr2 61014919 3 - 192460366 tct i macFas5.chr2 C 0 C 0 s chlSab2.chr22 64510621 3 - 101219884 cct i chlSab2.chr22 C 0 N 0 s otoGar3.GL873534 11084832 3 + 30473821 ccc i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16618999 3 + 58134056 cct i canFam3.chr20 C 0 C 0 a score=-757.000000 s hg38.chr14_KI270725v1_random 22579 3 + 172810 GAA- s gorGor5.CYUI01007532v1 15070 3 - 17846 AAA- i gorGor5.CYUI01007532v1 C 0 C 0 s nomLeu3.chr21 67601769 3 + 86207423 caa- i nomLeu3.chr21 C 0 N 0 s macFas5.chr2 61014922 3 - 192460366 caa- i macFas5.chr2 C 0 N 0 s otoGar3.GL873534 11084835 3 + 30473821 aga- i otoGar3.GL873534 C 0 C 0 s canFam3.chr20 16619002 3 + 58134056 -aat i canFam3.chr20 C 0 C 0 a score=2704.000000 s hg38.chr14_KI270725v1_random 22582 9 + 172810 CATGAAGTA s gorGor5.CYUI01007532v1 15073 9 - 17846 CATGAAGTA i gorGor5.CYUI01007532v1 C 0 C 0 s otoGar3.GL873534 11084838 9 + 30473821 aaagaatta i otoGar3.GL873534 C 0 N 0 s canFam3.chr20 16619005 9 + 58134056 aatgaatta i canFam3.chr20 C 0 N 0 a score=60620.000000 s hg38.chr14_KI270725v1_random 22591 712 + 172810 CACTTGGGGCAATAAAAGAAATCACCTCAAATCTTGCTGTGCGCCCCTCTGCGCCGGAGCCGGCGCCGTGCCCCTCTCTGCGCCTTCTTTTCTCACCATGGGGAAGCGTTTGGGGTCGTCTTGAGGGACCCCCTAGATGCTTCTACTCAGAGCCCCCAAAGCCGGGGAGCCTCCACTCCTCTGTCTGCAGCCTCCCCTGTCGGTTCTCGCTACCCAGGGTTCAGTGGCCTGGGGGCTGACGGAGGTGGTCGCCTCTGCCAAGGCCCCTCCCGGCACCTCCCTGGCTCATCCAGGCCACCTTCCTCCCAC-CTGGCTCACGTAAAGTGCTCTGGTCACCAGGAGCCCTTCCTGACCAGCCCCGGCCCCTTCTTGGCCTTCGCCCACCTGGCCTCCCCTGGAGCCCTGACCTGGGTGCCGGGCCTGCTGGGTCCAGAGCCCACCCCGCCCTGAACAACCCCGAGTCTCAGCCACCCTCAGCTCTTACCCTTTCACAGCTGGAGAGTGGAGCCTGGGcctgcgcctctctgcgcctgcgccgccgctgtgcccct-----------cgccgccgctgtccgcctctccgccgcg----------ccgccgctgaccgcctctccgccgcgccgccgctgtccgcctctccgccgcgccgccgctgaccgcctctccgccgcgccgccgctgtccgcctctccgccgcgccgccgctgtccgcctctccgccgcgccg s gorGor5.CYUI01007532v1 15082 728 - 17846 CACTT-GGGCAATAAAAGAAATCACAGCAAATCTTGCTGTGCGCCCCTCTGCGCCGGAGCCGGCGCTGTGCCCCTCTCTGCGCCTTCTTTTCTCACCATGGGGAAGCGTTTGGGGGCGTCTTGAGGGACCCCCTAGATGCTTCTACTCACAGCCCCCAAAGCCAGGGAGCCTCCACTCCTCTGTCTGCAGCCTCCCCTGTCGGTTCTCGCTACCCAGGGTTCAGTGGCCTGGGGGCTGACGGAGGT-GTTGCCTCTGCCAAGGCCCCTCCCTGCACCTCCCTGGCTCATCCAGGCCACCTTCCTCCCACGCTGGCTCACGCAAAGTGCTCTGGTCACCAGGAGCCCTTCCTGACCAGCCCCGGCCCCTTCTTCGCCTTCGCCCACCTGGCCT-CCCTGGAGCCCTGACCTGGGTGCCGGGCCTGCTGGGTCCAGAGCCCACCCCGCCCTGAACAACCCCGAGTCTCAGCCACCCTCAGCTCTTACCCTTTCACAGCTGGGGAGTGGAGCCTGGGCCTgcgcctctccgcgcctgcgccgccgctgtgcgcctctccgcgcctgcgccgccgctgtgcgcctctccaccgccgtccgcctctccgccgccgtccgcctctccgccgcgccgccgccgtccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccgccgccg-ccgcctctccgccgcgccg i gorGor5.CYUI01007532v1 C 0 N 0 a score=9722.000000 s hg38.chr14_KI270725v1_random 23370 114 + 172810 gcgagggcggagccgcgttctgctctgcacagaccttgggg-cactgcctcgctttgggacaactcggggccgcatcgacggtgaataaaatccttcctgtttgcagccctgTTt s panPan2.chrUn_NW_014019468v1 24105 115 + 66344 gcgagcgtggagctgcgttctgctctgcacagaccttgggggcactgcctcgctttgggacaactcggggccacatcgagggtgaataaaatccttcctgtttgcagccctgTTt i panPan2.chrUn_NW_014019468v1 N 0 C 0 a score=338.000000 s hg38.chr14_KI270725v1_random 23484 2 + 172810 gt s panPan2.chrUn_NW_014019468v1 24220 2 + 66344 gc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12355 2 - 56717 gc i papAnu3.chrUn_NW_003942124v1 N 0 C 0 a score=2000.000000 s hg38.chr14_KI270725v1_random 23486 2 + 172810 gg s panPan2.chrUn_NW_014019468v1 24222 2 + 66344 gg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12357 2 - 56717 gg i papAnu3.chrUn_NW_003942124v1 C 0 I 54 s manLeu1.NW_012099899v1 66835 2 + 473220 gg i manLeu1.NW_012099899v1 N 0 C 0 s colAng1.NW_012115910v1 6724448 2 - 6934359 gg i colAng1.NW_012115910v1 N 0 C 0 a score=546.000000 s hg38.chr14_KI270725v1_random 23488 1 + 172810 t s panPan2.chrUn_NW_014019468v1 24224 1 + 66344 t i panPan2.chrUn_NW_014019468v1 C 0 C 0 s manLeu1.NW_012099899v1 66837 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724450 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003942124v1 12359 54 - 56717 I a score=8145.000000 s hg38.chr14_KI270725v1_random 23489 14 + 172810 tggtggcagcgatg s panPan2.chrUn_NW_014019468v1 24225 14 + 66344 tggtggcagcgatg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285672 14 - 75399963 tggtggcagggaac i chlSab2.chr5 N 0 C 0 s manLeu1.NW_012099899v1 66838 14 + 473220 tggtggcagggacc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724451 14 - 6934359 tggtggcagccgcg i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003942124v1 12359 54 - 56717 I a score=39659.000000 s hg38.chr14_KI270725v1_random 23503 39 + 172810 gacactgcagccagccagagcgtagaaaggcatcggggt s panPan2.chrUn_NW_014019468v1 24239 39 + 66344 gacactgcagccagtcagagcgtagaaaggcgtcggggt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285686 37 - 75399963 gacactgcagctgtccagagcatagaaaggcatcg--gt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66852 39 + 473220 gaaactgcagctgtccatagtgtagaaaggcattggagt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724465 39 - 6934359 gacactgcagctggccagagcatagaaaggcgtcagagt i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8297 39 - 120202 gacactgcagctgtccagagcttagaaaggcgctggagt i rhiBie1.NW_016807452v1 N 0 C 0 e papAnu3.chrUn_NW_003942124v1 12359 54 - 56717 I a score=4711.000000 s hg38.chr14_KI270725v1_random 23542 3 + 172810 aag s panPan2.chrUn_NW_014019468v1 24278 3 + 66344 aag i panPan2.chrUn_NW_014019468v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12413 3 - 56717 aag i papAnu3.chrUn_NW_003942124v1 I 54 I 20 s chlSab2.chr5 43285723 3 - 75399963 aag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66891 3 + 473220 aag i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724504 3 - 6934359 gag i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8336 3 - 120202 gag i rhiBie1.NW_016807452v1 C 0 C 0 a score=17043.000000 s hg38.chr14_KI270725v1_random 23545 19 + 172810 tgcactatcca-ggctgcac s panPan2.chrUn_NW_014019468v1 24281 19 + 66344 tgcgctatcca-ggctgcac i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285726 20 - 75399963 cgcattttccagggctgcac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66894 20 + 473220 tgtgctctccagggctgcat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724507 20 - 6934359 tgcgctgtccagggttgcac i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8339 20 - 120202 ttcactatccagggctgcac i rhiBie1.NW_016807452v1 C 0 C 0 e papAnu3.chrUn_NW_003942124v1 12416 20 - 56717 I a score=18627.000000 s hg38.chr14_KI270725v1_random 23564 13 + 172810 tgcgggtggcctg s panPan2.chrUn_NW_014019468v1 24300 13 + 66344 tgcgggtggcctg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12436 13 - 56717 cgcccgcggcctg i papAnu3.chrUn_NW_003942124v1 I 20 I 19 s chlSab2.chr5 43285746 13 - 75399963 cgcccgcggcctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66914 13 + 473220 cgcccacggcctg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724527 13 - 6934359 tgcccgtggcctg i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8359 13 - 120202 cgcccgcggcctg i rhiBie1.NW_016807452v1 C 0 C 0 a score=20428.000000 s hg38.chr14_KI270725v1_random 23577 19 + 172810 ggacgggttgggagcccta s panPan2.chrUn_NW_014019468v1 24313 19 + 66344 ggacgggttgggagcccta i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285759 19 - 75399963 gggtgggttgggagcccta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66927 19 + 473220 gggtgagttgggggtccta i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724540 19 - 6934359 ggacactttgggggcccta i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8372 19 - 120202 gggtgggttgggagcccta i rhiBie1.NW_016807452v1 C 0 C 0 e papAnu3.chrUn_NW_003942124v1 12449 19 - 56717 I a score=8022.000000 s hg38.chr14_KI270725v1_random 23596 4 + 172810 tctc s panPan2.chrUn_NW_014019468v1 24332 4 + 66344 tctc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12468 4 - 56717 tctc i papAnu3.chrUn_NW_003942124v1 I 19 I 16 s chlSab2.chr5 43285778 4 - 75399963 tctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66946 4 + 473220 tctc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724559 4 - 6934359 tctc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8391 4 - 120202 tctc i rhiBie1.NW_016807452v1 C 0 C 0 a score=17407.000000 s hg38.chr14_KI270725v1_random 23600 16 + 172810 aggtgtcactgcccat s panPan2.chrUn_NW_014019468v1 24336 16 + 66344 aggcgtcactgcctgt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s chlSab2.chr5 43285782 16 - 75399963 aggcgtcactgcccat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66950 16 + 473220 aggcatgactgcctgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724563 16 - 6934359 aggcgtcactgcccgc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8395 16 - 120202 aggtgtcactgcccgt i rhiBie1.NW_016807452v1 C 0 C 0 e papAnu3.chrUn_NW_003942124v1 12472 16 - 56717 I a score=80969.000000 s hg38.chr14_KI270725v1_random 23616 51 + 172810 cttgggtggctggttgggtgtgctatctggggctgtgctgcctgcaccgg----g s panPan2.chrUn_NW_014019468v1 24352 51 + 66344 cctgggtggctgtttgggtgtgctatctggggctgtgctgcctgcaccgg----g i panPan2.chrUn_NW_014019468v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12488 51 - 56717 cttaggtggctggttgggtgtgccatctggcgctgtgctgcctgcaccgg----g i papAnu3.chrUn_NW_003942124v1 I 16 C 0 s chlSab2.chr5 43285798 50 - 75399963 cttgggtggctggttgggtgtgccatct-gtgctgtgttgcctgcaccgg----g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 66966 55 + 473220 cttgggtgactggttgggtgcaccatctggggctgtgctgcctgcactggaggcg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724579 51 - 6934359 cttgggtggctggttgggtgtgctatctggggctgtgctgcctgcaccgg----g i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8411 48 - 120202 cttaggtggctggttgggtgtg---tctggcgctgtgctgcctacaccgg----g i rhiBie1.NW_016807452v1 C 0 C 0 a score=33575.000000 s hg38.chr14_KI270725v1_random 23667 16 + 172810 gggtg--gtttgggggcc s panPan2.chrUn_NW_014019468v1 24403 18 + 66344 gggggttgtttgggggcc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 0 16 - 112215 gggcg--gtttgggggct i gorGor5.CYUI01000689v1 N 0 C 0 s papAnu3.chrUn_NW_003942124v1 12539 16 - 56717 gggtg--ggttgggggcc i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43285848 16 - 75399963 gggtg--ggttgggggcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67021 16 + 473220 gggtg--ggttgggggtc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724630 16 - 6934359 gggtg--ggttgggggcc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8459 16 - 120202 gggtg--ggttgggggcc i rhiBie1.NW_016807452v1 C 0 C 0 a score=2552.000000 s hg38.chr14_KI270725v1_random 23683 1 + 172810 c s panPan2.chrUn_NW_014019468v1 24421 1 + 66344 c i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 16 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8994347 1 + 13868332 c i ponAbe2.chr2a_random N 0 I 123 s papAnu3.chrUn_NW_003942124v1 12555 1 - 56717 c i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43285864 1 - 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67037 1 + 473220 c i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724646 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8475 1 - 120202 c i rhiBie1.NW_016807452v1 C 0 C 0 a score=25108.000000 s hg38.chr14_KI270725v1_random 23684 15 + 172810 aaaccggggctgcac s panPan2.chrUn_NW_014019468v1 24422 15 + 66344 aaaccggggctgcac i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 17 15 - 112215 aaaccggggctgcac i gorGor5.CYUI01000689v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 12556 15 - 56717 tatcctgggttgcac i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43285865 15 - 75399963 tatcctgggctgcac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67038 15 + 473220 tatctggggctgccc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724647 15 - 6934359 taaccggggctgcag i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8476 15 - 120202 tatcctggactgcac i rhiBie1.NW_016807452v1 C 0 C 0 e ponAbe2.chr2a_random 8994348 123 + 13868332 I a score=32895.000000 s hg38.chr14_KI270725v1_random 23699 15 + 172810 tgcctttggcgggga s panPan2.chrUn_NW_014019468v1 24437 15 + 66344 tgcctttggcgagga i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 32 15 - 112215 tgcctttggcgggga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469251 15 + 115148730 TGCCTTcggcaggga i nomLeu3.chr7b N 0 C 0 s papAnu3.chrUn_NW_003942124v1 12571 15 - 56717 tgccctcagcgggga i papAnu3.chrUn_NW_003942124v1 C 0 I 507 s chlSab2.chr5 43285880 15 - 75399963 tgccctcggtgggga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67053 15 + 473220 tgccctccgcagcga i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724662 15 - 6934359 tgcccttgttgggga i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8491 15 - 120202 tgccctcagctggta i rhiBie1.NW_016807452v1 C 0 C 0 e ponAbe2.chr2a_random 8994348 123 + 13868332 I a score=6179.000000 s hg38.chr14_KI270725v1_random 23714 4 + 172810 gccg s panPan2.chrUn_NW_014019468v1 24452 4 + 66344 gctg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 47 4 - 112215 gccg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469266 4 + 115148730 gctg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43285895 4 - 75399963 gcgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67068 4 + 473220 gcgg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724677 4 - 6934359 gcca i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 8506 4 - 120202 gcgg i rhiBie1.NW_016807452v1 C 0 I 500 e ponAbe2.chr2a_random 8994348 123 + 13868332 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I a score=131793.000000 s hg38.chr14_KI270725v1_random 23718 87 + 172810 gttgggggcactatcccagactgtattgctggcaacagtgaggtgggctaagtgtgctatccagggctgcactgtgcggctgtgggg s panPan2.chrUn_NW_014019468v1 24456 87 + 66344 gttgcgggcactatcccagactgtattgctggcaacagtgaggtgggctaagtgtgctatccggggctgcactgtgcggctgtgggg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 51 87 - 112215 gttgggggcactatcccagactgtattgctggcaacagtgaggtgggttaagtgtgctatctggggctgcactgtgcggctgtgggg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469270 87 + 115148730 gttgagggcactatcccatactgtattgctggcaacagtgaggtgggctaaatgtgctatctggggctgcactgcgtggctgtggcg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43285899 86 - 75399963 gttgggggcgctatccgagactgtattgacggcagcagtgaggtgggttaaggcttctatctgggcctgcactacccgg-tgtgggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67072 86 + 473220 gttgggggcactatccgcgactgtattgacagcagcagtgaggtgggttaagggtgctatctgggcctgcactaccctt-tgtgggt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724681 87 - 6934359 gttgggagcactatcccagactgtattgccggcagcagtggggtgggctaagtgtgctatccagggctgcactgcgcggctgtgggg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994348 123 + 13868332 I e rhiBie1.NW_016807452v1 8510 500 - 120202 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I a score=4906.000000 s hg38.chr14_KI270725v1_random 23805 3 + 172810 ggt s panPan2.chrUn_NW_014019468v1 24543 3 + 66344 ggt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 138 3 - 112215 ggg i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8994471 3 + 13868332 ggg i ponAbe2.chr2a_random I 123 I 99 s nomLeu3.chr7b 114469357 3 + 115148730 ggg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43285985 3 - 75399963 ggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67158 3 + 473220 ggg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724768 3 - 6934359 agg i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 8510 500 - 120202 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I a score=120777.000000 s hg38.chr14_KI270725v1_random 23808 98 + 172810 ggggtggcggtttcgg-ttgagggcgctatggggtgctgtaatgcccatggtccagggaggcggggcagtttgggtatgttgggtgtgctattgggggg s panPan2.chrUn_NW_014019468v1 24546 95 + 66344 ----tggcggtttcgggttgagggcgctatggggtgctgtaatgcccatggtgcggggaggtggggcggtttgggtatgttgggtgtggtattgggggg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 141 97 - 112215 --ggtggcggttttgggttgagggcgctatggggtgctgtaatgcccatggtgtggggaggcggggcagttagggtatgttgggtgtgctattgggggg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469360 99 + 115148730 gtggtggcgattttgggttgagggcactatggggtgctgcaatgcccatggtgcgtggaggcagggtggtttgtgtgtcttcggtgcgctattgtgggg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43285988 89 - 75399963 ---ggg-----tttgggttgagggcgctatggggtgctgcagtgcccacggtgcagggagg-ggggcggtttgcgtgtgttgggtgcgctatttg-ggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67161 82 + 473220 ---ggg------ttgggttgagggcgctatggagtgctgtagtgcccacagtgcggggaggcggggcggtttgggtgtgttggg-gtgctat------- i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724771 96 - 6934359 ---gtggcggtttcgggttgagggcgctgtggggtgctcccaagcccatggtgcagggaggcggggcggtttgggtgtgttgggtgcgctgttggtggg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994474 99 + 13868332 I e rhiBie1.NW_016807452v1 8510 500 - 120202 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I a score=781.000000 s hg38.chr14_KI270725v1_random 23906 1 + 172810 g s panPan2.chrUn_NW_014019468v1 24641 1 + 66344 g i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 238 1 - 112215 g i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8994573 1 + 13868332 a i ponAbe2.chr2a_random I 99 I 1065 s nomLeu3.chr7b 114469459 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43286077 1 - 75399963 g i chlSab2.chr5 C 0 C 0 s colAng1.NW_012115910v1 6724867 1 - 6934359 a i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 8510 500 - 120202 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I e manLeu1.NW_012099899v1 67243 0 + 473220 C a score=269513.000000 s hg38.chr14_KI270725v1_random 23907 165 + 172810 gcgacactgctggt----ggtagggggcagggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttcaggtactatgttaaacaacagtggtgacagggggcatccttatcatgttcca--gatcttagaggaaaagctttccatttttccccat s panPan2.chrUn_NW_014019468v1 24642 165 + 66344 gctacactgcaggt----ggtagagggcagggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttctggtactatgttaaacaacagtggtgacagcgggcatccttatcatgttcca--gatcttagaggaacacctttccatttttccccat i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 239 165 - 112215 gcgacactgctggt----ggtagggggcagggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttctggtactatgttaaacaacagtggtgacagggggcatccttatcatgttcca--gatcttagaggaaaagctttccatttttccccat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469460 165 + 115148730 tctacactgctggt----ggcagggggcagggtgggttgggggc----catgtcaggttctgcactgattgctttagctgggatttccagtactatgtttaacaacagtggtgacagtgggcatccttatcatgttcga--gatcttagaggaaaagctttccattttcccccat i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43286078 166 - 75399963 tctacactgctgtt----ggcag-gggcggggtgggttgagggc----cgtatcaggggctgcagtgattgctttagctaggatttccagtactgtgttaaatgtcagtggtgacagtgggcatccttatcatgttccaagaatgttagaggaaaagctttccatttttccccat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67243 163 + 473220 -----actgctggtggcgggcag-gggtggggtgggttgggggc----catatcaggggctgcactgattgctttagctaggatttccagtactatgttaaatagcagtggtgacagtgggcatccttgtcatgttcca--aatgttagaggaaaagctttccatttttccccat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6724868 169 - 6934359 gctacactgctggt----ggcagagggcagggtgggttgggaaccgtacgtatcaggggctgcactgattgctttagttaggatttccagtactacgttaaataacagtggtgacagtggacatccttatcatgttcca--gatcttagaggaaaagctttccatttttccccat i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 8510 500 - 120202 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I a score=330956.000000 s hg38.chr14_KI270725v1_random 24072 156 + 172810 tccatatgattctagctgtgggtgtctttcctgtagtttttatt-atgttgcggtatgtttcttttgtgcctgtttctttgaggatttatagcatgaagggatgttgaatttcatcaaatgctttttcggtttcagttgacgtgatcatactgtttt s panTro5.chrY 282915 156 + 26350515 tccatatgattctagctgtgggtgtctttcctgtagtttttatt-atgttgcgatatgtttcttctgtacccgtttctttgaggatttatagcatgaagcgatgctgaatttcatcaaatgctttttcagtttcagttgacatgatcatactgtttt i panTro5.chrY N 0 C 0 s panPan2.chrUn_NW_014019468v1 24807 154 + 66344 tcc--atgattctagctgtgggtgtctttcctgtagtttttatt-atgttgtggtatgtttattctgtgcccgtttccttgaggatttatagcatgaagggatgttgaatttcatcaaatgctttttcagtttcagttgacgtgatcatactgtttt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 404 155 - 112215 tccatatgattctagctgtgggtgtctttcctgtag-ttttatt-atgttgcggtatgtttcttctgtgcccgtttctttgaggatttatagcatgaagggatgttgaatttcatcaaatgctttttcggtttcagttgacatgatcatactgtttt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469625 156 + 115148730 tccatctgattctagctgtgggtgtctttcctgtagtttttatt-atgttgcggtgtgtttcttctgtacccgtttttttgaggatttacagcatgaaggcatgttgaatttcatcaaatgctttttcagtttcagttgacatgatcatactgcttt i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43286244 156 - 75399963 tgaatataattctagctgtgagtctctctcatgtggtttttatt-atggtgaggtatgtttcttctgtacctggttttttgaagatttatagcatgaagggatgttgagtttcatcaaatgctttttcagtttcaatggacatgatcatactgtttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67406 156 + 473220 tccatataattctagctgtgagtctctctcatgtggtttttatt-atggtgaggtatgtttcttgtgtacttggttttttgaggatttatagcatgaagagatgttgaatttcatcaaatgctttttcagtttcaatggacatgatcatactgtttt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725037 157 - 6934359 tccgtgtgattctggctgtgggtgtctctcatgtggtttttattaatgttgcgatatgtttcttctgttccaatttttttgaggatttatagtgtgaagggatgttgaatattattaaatgttttttcagtttcaattaacgtgatcatacagtttt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 8510 500 - 120202 I e papAnu3.chrUn_NW_003942124v1 12586 507 - 56717 I a score=4095.000000 s hg38.chr14_KI270725v1_random 24228 1 + 172810 t s panTro5.chrY 283071 1 + 26350515 t i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 24961 1 + 66344 t i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 559 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469781 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s papAnu3.chrUn_NW_003942124v1 13093 1 - 56717 t i papAnu3.chrUn_NW_003942124v1 I 507 I 460 s chlSab2.chr5 43286400 1 - 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67562 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725194 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 9010 1 - 120202 t i rhiBie1.NW_016807452v1 I 500 I 499 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I a score=806601.000000 s hg38.chr14_KI270725v1_random 24229 364 + 172810 gtcatttatttggttgatatgatgtatcacattgtatgttgagtgactcttgcatcccagggatacatcccacttgatcatgatgaattatctttttaatgtattactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatactggcctgtagtttccttctttgatgcttttatctgatttttgtatcacagtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaaatagtttgagcaggattcgtactaggtctttaaattgtttgctgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagactt s panTro5.chrY 283072 360 + 26350515 gtcatttatttggttgatatgatgtatcacattgtatgttaagtgacccttgcatcccagggatacatcccacttgatcatgatgaattatcttttgaatgtattactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatactagcctgtagtttccttctttgatgcctttgtct----ttggtatcacagtaataatggtctcataaaataagtttggaagtattccctcctgtttttcaaaatagtttgaggaggatttgtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagcctt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 24962 364 + 66344 gttgtttatttggttgatatgacgtatcacattgtatgttgagtgacccttgcatcccagggatacatctcacttgatcatgatgaattatctttttaatgttttactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatactggcctgtagtttccttctttgatgcctttgtctgattttggtatcacagtaataatggtctcataaaataagtttggaagtattccctcctgtttttcaaaatagtttgagcaggatttgtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagactt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 560 364 - 112215 gtcgtttatttggttgatatgatgtatcacattgtatgttgagtgactcttgcattccagggatacatcccacttgatcatgatgaattatctttttaatgtattactgaatttgattcactggtattttgttgaggatttttgcatcaatattagagatcctggcctgtagttttcttctttgatgcttttatctgattttcgtatcacagtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaaatagtttgagcaggattcgtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttcctgggcttttctttactgggagactt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114469782 363 + 115148730 gtcgtttatttggttgatgtgatgtatcacattgtatgctgagtgacccctgcattccagggatacatcccacttgatcatgatgaattatctttttaatatattattgaatttgaatcact-gtattttgttgaggaattttggatcaatattcgagatactggcctatagtttccttctttgatgcctttgtctgattttggtatcacagtaataatggtctcatagaataagtttggaagtattctctactgtttttccagatagtttgagtagggttggtactaggtctttaaattgtttggtgtgaagccatcagcagtgaagacatcagttgctgggcttttctttaccgggagactt i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43286401 363 - 75399963 gtcttttatttgtttgatatgatgtatcacattgtgtgttgaatgatgcttgcatcccagggatacatcccacttgatcataatgaattatctttataatgttttgctgaatttgatttgctggtattgtgttcaggatttatgcatcaatattaaagatattggcctgtagtttctgtctttgatgtctttgtctgactttggtatcagggtagtaatgaccgcatagaatgagtttggaagtattctctccagttttttaaaatagtttgagtaggattggaactgggtctttaaat-gtttgatgtgaagtcatcagcagtgaagccatcaattcctgggcttttctttaatgggagacgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67563 363 + 473220 gtcctttatttggttgataaggtgtatcacattgtgtgtcgaatgatccttgcatcccaggagtacatcccacttgatcataatgaattatctttataatgtattgctgaatttgatttgctggtgttgtgttcaggatttatgcatcagtattagagatgctgacctgtagtttccttctttgatgtcttagtctgactttggtatcagggtaataatggcctcatagaataagtttgggagtattctctcctgttttttaaaatagtttgagaaggattggtactaggtcttcaaat-gtttggtgtgaagccatgagcagtgaagccatcaattcctgggcttttctttactgggagacat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725195 364 - 6934359 gtcttttatttggttgatatgatgtatcacattgtacgttgaatgacctttgcatcccagggatacatcccacttgatcatgatgaattatcttttcaatatattgctgaatttgattcactggtattttgttgaggatttttgcatcaacattggagatactggcctgtagtttccttctttgatgtcgttgtctgattttggtatcagggtaataatggtctcatagaataagtttggaagtattccctcctgtttttcaaagtagtttgagtaggattggtactaggtctttatatcgtttggtgtgaagccatcagcagtgaagccatcagttcctgggcttttctttactgggagactt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9011 499 - 120202 I e papAnu3.chrUn_NW_003942124v1 13094 460 - 56717 I a score=274516.000000 s hg38.chr14_KI270725v1_random 24593 94 + 172810 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttggatgttttcattgtttaacctaagtaggttgtatgcatctagga s panTro5.chrY 283432 94 + 26350515 tttctgatggcttcaatctcattacttgctacggatctgttctggtcttggatgttttcattgttaaacctaagtaggttgtatgcatctagga i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25326 94 + 66344 tttctgatggcttcaatctcattacttgttaccaatgtgttctggtcttggatgttttcattgttcgacctaagtaggttgtatgcatctagga i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 924 94 - 112215 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttggatgttttcattgtttaacctaagtaggttgtatgcatctagga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470145 94 + 115148730 tttctgatggcttcaatctcattacttattaccaatctgttctggtcttggatgtctccattgttcaacgtaagtaggttgtatgcatctagga i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22608 94 - 38383 tttctgatggcttcaatctcattacttgttaccaatctgttctggtcttgcacgtttttactgttcaacctaagcaggttgtatgcgtctagaa i cerAty1.NW_012006010v1 N 0 C 0 s chlSab2.chr5 43286764 94 - 75399963 tttctgatggcttcaatctcattacttgttaccgatctgttctgattttggatgtattcacggtttaacctaggtaggttgtatgtgtctagga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 67926 94 + 473220 tttctgatggcttcaatctcattacttgttactgatttgttctgattttggatgttttcactgttcaatctaggtaggttgtatgcatctagga i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725559 92 - 6934359 --tctgatggcttcaatctcattacttgttaccaatctgttctggtcttgcacgtttttactgttcaacctaagtaggttgtatgcgtctagaa i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9011 499 - 120202 I e papAnu3.chrUn_NW_003942124v1 13094 460 - 56717 I a score=16380.000000 s hg38.chr14_KI270725v1_random 24687 4 + 172810 attt s panTro5.chrY 283526 4 + 26350515 attt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25420 4 + 66344 attt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1018 4 - 112215 attt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470239 4 + 115148730 attt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22702 4 - 38383 attt i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 13554 4 - 56717 attt i papAnu3.chrUn_NW_003942124v1 I 460 C 0 s chlSab2.chr5 43286858 4 - 75399963 attt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68020 4 + 473220 attt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725651 4 - 6934359 attt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9011 499 - 120202 I a score=12435.000000 s hg38.chr14_KI270725v1_random 24691 3 + 172810 gcc s panTro5.chrY 283530 3 + 26350515 gcc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25424 3 + 66344 gcc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1022 3 - 112215 gcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470243 3 + 115148730 gcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22706 3 - 38383 gtc i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 13558 3 - 56717 gtc i papAnu3.chrUn_NW_003942124v1 C 0 I 93 s chlSab2.chr5 43286862 3 - 75399963 gtc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68024 3 + 473220 gtc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725655 3 - 6934359 gtc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 9510 3 - 120202 gtc i rhiBie1.NW_016807452v1 I 499 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I a score=7092.000000 s hg38.chr14_KI270725v1_random 24694 2 + 172810 aa s panTro5.chrY 283533 2 + 26350515 aa i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25427 2 + 66344 aa i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1025 2 - 112215 aa i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470246 2 + 115148730 aa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22709 2 - 38383 aa i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43286865 2 - 75399963 aa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68027 2 + 473220 ag i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725658 2 - 6934359 aa i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 9513 2 - 120202 aa i rhiBie1.NW_016807452v1 C 0 I 91 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e papAnu3.chrUn_NW_003942124v1 13561 93 - 56717 I a score=265092.000000 s hg38.chr14_KI270725v1_random 24696 90 + 172810 tttctactaggctttccaatttattggcatataatagccagttatgatcctttgaatttct-gaagtattagttgtaatgtctcctttttt s panTro5.chrY 283535 90 + 26350515 tttctactaggctttcaaatttattggcatataatagccagttatgatcctttgaatttct-gaagtattagttgtaatgtctcctttttt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25429 90 + 66344 tttctactaggctttccaatttactggcatgtaatagccagttatgatcctttaaatttct-gaagtattagttgtaatgtctccttttct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1027 90 - 112215 tttctactaggctttccaatttattggcatataatagccagttatgatcctttgaatttct-gaagtattagttgtaatgtctcctttttt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470248 90 + 115148730 tttctactaggctttccaatttattggcatgtaatagccagttattatcctttgaatttct-gaagtatcagttgtaatgtctcctttttt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22711 90 - 38383 tttctactaggcttttcaatttgttggcgtatgatagccagttatgatcctttgaatttct-gaagtatcagttgtaatgtcttctttttt i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43286867 91 - 75399963 tctctactaggctttccagtttattggcatataatagccagttatgatcctttgaatttctagaagtaccacttgtaatgtctcctttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68029 89 + 473220 tttctactaggctttccaatttatcggcatataatagccagttatgatcctttgaatttctagaagtatcagttgtgatagctcc--tttt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725660 90 - 6934359 tttctactaggctttccaatttattggcatatgatagccagttatgatcctttgaatttct-gaaatatcagttgtaatgtcttctttttt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9515 91 - 120202 I e papAnu3.chrUn_NW_003942124v1 13561 93 - 56717 I a score=4095.000000 s hg38.chr14_KI270725v1_random 24786 1 + 172810 t s panTro5.chrY 283625 1 + 26350515 t i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25519 1 + 66344 t i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1117 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470338 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22801 1 - 38383 t i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 13654 1 - 56717 t i papAnu3.chrUn_NW_003942124v1 I 93 I 646 s chlSab2.chr5 43286958 1 - 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68118 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s rhiBie1.NW_016807452v1 9606 1 - 120202 t i rhiBie1.NW_016807452v1 I 91 I 649 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e colAng1.NW_012115910v1 6725750 0 - 6934359 C a score=41893.000000 s hg38.chr14_KI270725v1_random 24787 18 + 172810 aatctgttgattttattt s panTro5.chrY 283626 17 + 26350515 a-tctgttgattttattt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25520 18 + 66344 aatctgttgattttattt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1118 18 - 112215 aatctgttgattttattt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470339 17 + 115148730 a-tctgttgattttattt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22802 17 - 38383 -atctgttgattttgttt i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43286959 18 - 75399963 tatctcttgatttcattt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68119 18 + 473220 tatctcttgattttattt i manLeu1.NW_012099899v1 C 0 I 77 s colAng1.NW_012115910v1 6725750 18 - 6934359 aatctgtcaattttattt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9607 649 - 120202 I e papAnu3.chrUn_NW_003942124v1 13655 646 - 56717 I a score=140657.000000 s hg38.chr14_KI270725v1_random 24805 71 + 172810 atttgaatct--tgtctctttt------cttaggctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa s panTro5.chrY 283643 73 + 26350515 atttgaatct--tgtctctttttt----cttagcctggttaaaagtttgtcaattttgttttgctttccagaaaaccaa i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25538 71 + 66344 atttgaatct--tgtctctttt------cttagcctggttaaaagtttgtcaatgttgtttagctttccagaaaaccag i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1136 71 - 112215 atttgaatct--tgtctctttt------cttaggctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470356 76 + 115148730 atttgagtct--tgtctcttttttcttagttagcctcgttaaaagtttgt-aattttgtttagctttccagaaaaccaa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22819 67 - 38383 ----gaatct--tgtgtttttt------cttagcctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43286977 69 - 75399963 ----gagtcttctctctttttc------cttaggctggctaaaagtttctcagttttgtttagctttgcagaaaaccaa i chlSab2.chr5 C 0 C 0 s colAng1.NW_012115910v1 6725768 73 - 6934359 gtttgaatcttctgtttttttt------cttagcctggttaaaagtttgtcaattttgtttagctttccagaaaaccaa i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9607 649 - 120202 I e papAnu3.chrUn_NW_003942124v1 13655 646 - 56717 I e manLeu1.NW_012099899v1 68137 77 + 473220 I a score=196672.000000 s hg38.chr14_KI270725v1_random 24876 89 + 172810 cttttcgtttaatcttgtgtgtttttt--atttcaattttgtttctgctacgatcttagt----tattttcttatttttggtttagtttgttctt s panTro5.chrY 283716 89 + 26350515 cttttcgtttaatcttgtgtgtttttt--ctttcaattttatttccactacaatcttatt----tatttgcttattttcagtttagtttgttctt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25609 89 + 66344 cttttcgtttaatcttctgtgtttttt--ctttcaattttatttctgctacaatcttatt----tattttattaatttcagtttagtttgttctt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1207 89 - 112215 cttttcgtttaatcttgtgtgtttttt--atttcaattttgtttctgctacgatcttatt----tattttcttattttcggtttagtttgttctt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470432 89 + 115148730 cttttcgtttaatcttgtttgtttttt--atttcaattttacttctgctatgatcttact----tattttgttatttttggtttagtttgttatt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22886 94 - 38383 gtttttgtttaatcttttgtactttttt-atttaaattttatttctgctatgatcttattttcttattttcttcttttgggtttagtttgtcctt i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287046 95 - 75399963 ctttttgtttaatcgtttgtatttttttcatttcaattttatttttgttacgatctttattatctcttctcttattttgggtttagttcttactt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68214 93 + 473220 cttttggttaaacctttggaatttttt--atttcaattttgtttttgttatgatctttatcatctattctcttattttaagtgtagtttgttctc i manLeu1.NW_012099899v1 I 77 C 0 s colAng1.NW_012115910v1 6725841 94 - 6934359 ctttttgtttaatcttttgtactttttt-atttaaattttatttctgctgtgatcttattttcttattttgttattttgggtttagtttgtcctt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8994574 1065 + 13868332 I e rhiBie1.NW_016807452v1 9607 649 - 120202 I e papAnu3.chrUn_NW_003942124v1 13655 646 - 56717 I a score=2469.000000 s hg38.chr14_KI270725v1_random 24965 4 + 172810 actt s panTro5.chrY 283805 4 + 26350515 actt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25698 4 + 66344 actt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1296 4 - 112215 actt i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8995639 4 + 13868332 actt i ponAbe2.chr2a_random I 1065 I 1095 s nomLeu3.chr7b 114470521 4 + 115148730 actt i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43287141 1 - 75399963 g--- i chlSab2.chr5 C 0 C 0 e rhiBie1.NW_016807452v1 9607 649 - 120202 I e papAnu3.chrUn_NW_003942124v1 13655 646 - 56717 I e colAng1.NW_012115910v1 6725935 0 - 6934359 C e manLeu1.NW_012099899v1 68307 0 + 473220 C e cerAty1.NW_012006010v1 22980 0 - 38383 C a score=1292477.000000 s hg38.chr14_KI270725v1_random 24969 470 + 172810 tactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctgt----------------aaatctctgcctttgtactgctttctgcgtaac--aagtcttggtatactgtgttttcattaccctttgtttcatgaaatttttgaatttctgtgttagtatcttcattgacccgctagtcatttattcaggagggtagtatttaacttccatgtgattgtattgtttccaaaattacttttcttattgatacctagttttattcctttgtagtgaaagaagatggccacagagacagacagcagcgtggttagagtggtaggagccggccatcagcgagagctgctccatgcctggctgctgggtgctagagcctgcagccc-actggcttgcctcactgtggttggtggtggcagtaacagagactgcagcacaaccagagtggtaggacaggggctatc s panTro5.chrY 283809 466 + 26350515 tactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctgt----------------aaatctctgcctttgtactgctttctgcgtaac--aagttttggtatactgtgttttcattacactttgattcatgaaatttttgaatttctgtcttagtatcttcattgacctactagtcatttattcaggagggtagtgtttaacttccatgtgattgtattgtttccaaaattactcttcttattgatacctagttttattcctttgtagtcaaagaagatggccacggagacag----cagcgtggtcagagtggtaggagccggccattggcgagagctgctccatgcatggctgctgggtgctagagcctgtggccc-actggcttgcctcactgtggttggtggtggcggtgacagagactgcagcatgaccagagtggtaggacaggggctatc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 25702 465 + 66344 tactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctat----------------aaatctctgcctttgtactgctttctgcgtaac--aagttttggtatcctgtgttttcattaccctttgtttcatgaaatttttgaatttctgtcttagtatcttcattgacctgctagtcatttattcaggagagtagtgcttaacttccatgtgattgtattgtttccaaaattactcttcttattgatacc-agttttattcctttgtagtcaaagaagatggccacagagacag----cagcgtggtcagagtggcaggagccggccatcagcgagagctgctccatgcctggctgctgggtgctagagcctgcggccc-gctggcttgcctcactgtggttggtggtggtggtgacagagactgcagcacgaccagagtggtaggacaggggctatc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1300 470 - 112215 tactagttctttaagatgtattgtttatttgaagtttttcttttgtttggatggtaggcacttata-------------gctgt----------------aaatctctgcctttgtactgctttctgcgtaac--aagttttggtatactgtgttttcattaccctttgtttcatgaaatttttgaatttctgtcttagtatcttcattgacccgctagtcatttattcaggagggtagtgtttaacttccatgtgattgtattgtttccaaaattacttttcttattgatacctagttttattcctttgtagtgaaagaagatggccacggagacagacagcagcgtggtcagagtggtaggagccggccatcagcgagagctgctccatgcctggctgctgggagctagagcctgcggccc-actggcttgcctcactgtagttggtggtggcggtgacagagactgcagcatgaccagagtggtaggacaggggctatc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470525 464 + 115148730 tactagttctttgagatgtattgtttatttgaagttttt-ttttgtttggatggtaggctcttata-------------actat----------------aaatctcggcctttgtactgctttctgtgtaac--aa-tattggtatactgtgttttcattaccctttgtttcatgaaatttttgagtttctgtcttaatatcttcattgacccactagtcatttattcaggagggtagtgtttaacttccctgtgattgtattctttccaaagttactcttcttattgatacctattttcattcctttgtagtcaaagaagatggccacggagacag----cagcgtggtaggagtggtaggagccggccatccgcgagagctgctctgtgccaggctgctgcatgctagagcctgcggccc-actggcttgcctcactgtggttgatggtggcagtgacagagactgcagcacgaccagagtggtaggacaggggctatc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 22980 467 - 38383 -actagttctttaagatatattgtttatttgaagtttttcttttgtttggatggtaggcacttcta-------------gctat----------------aaatctctgcctttgtactgctttctgtgtaacgtaagttttgctgtattgtgttttcattaccatttgtttcataaaatttttcaatttctgtcttagtatcttcattgacccactagtcattcattcaggagcgtattgtttaacttccatgtgattgtatggttttcaaaattactcttcttactgatacctagttttattcctttgtagtcaaagaagatggccatggagacag----cagcgtggttggagtggtaggagccggccatcagcgagagctgctccgggcctggctgctgagtgctagagcctgcggccc-agtggcttccttcactgtggttggtggtggtggtgacagagactgcagcatgaccacagtggtagggcaggggctatc i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287142 497 - 75399963 -actagttctttaagatgtattgttcatttgaagtttttcttctgtttggatggtgggccattgtactgcttttgtactgccattgtacaaaaagaaaaaaagtttctgccattgtactgctttctgcatatcgtaagttttggtatattgtgttttcattaccatttgtttcaggaaatttttgaatttctatcttagtatgttcattggccaactagtcattcattcagaagtgtattgcttaacttccatgtgattatatagtttccaaaatttcttttcttattgatatctagttttattcctttgtagtcaaagaaCAtggccatggagacag----catcatggtcagagtggtaggagggagccatcagcaagagctgctccaggccaggctgctgggtgctagagcctgcagccctggcggcttgcctcactgtggtttgtggtgatggcgacagagactgcagcacgaccagagtggtaggacagggactatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68307 462 + 473220 -actagttctttaagatgtattg-----ttggaagtttttttctgtttggatggtaggcacttatg-------------gctat----------------aaatttctgcttttgtactgctttctgcatatcataagttttggtatattgtgttttcattaccatttgtttcaggaaatgtttcagtttccatcttagtatcttcattgaccaactagtcattcattcagcagtgtattgtttaactttaatgtgactatatactttccaaaattccttctcttattgatatctagttttattcttttgtagtcaaagaagatggccatggagacag----catcatgatcagagtggtaggaggcagccatcagcaagagctgctctgtgcccagctgctgggtgctagagcctgcagccc-agtggcttgcctcattgcggttgatggcggtgacgacagagactgcagcacaaccaaagtggtaggacaggagctatc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6725935 467 - 6934359 -actagttctttaagaggtattgtttatttgaagtttttcttttgtttggatgataggcacttata-------------gctat----------------gaatctctgcctttgtactgctttctgtgtaatgtaagttttgctgtattgtgttttcattaccatttgtttcataaaatttttcaatttctgtcttagcatcttcattgacccactagtcattcattcaggagtgtattgtttaaattccatgtgattgtatggttttcaaaattactcttcttactgatacctagttttattcctttgtagtcaaagaagatggccatggagacag----cagcgtggttggagtggtaggagccggccatcagtgagagctgctctgggcctggctgctaagtgctagaacctgcagccc-agtggcttccttcactgtggttggtggtggcggtgacagagactgcagcatgatcaaagtggtagggcaggggctatc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e rhiBie1.NW_016807452v1 9607 649 - 120202 I e papAnu3.chrUn_NW_003942124v1 13655 646 - 56717 I a score=2552.000000 s hg38.chr14_KI270725v1_random 25439 1 + 172810 c s panTro5.chrY 284275 1 + 26350515 c i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26167 1 + 66344 c i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1770 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470989 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s papAnu3.chrUn_NW_003942124v1 14301 1 - 56717 c i papAnu3.chrUn_NW_003942124v1 I 646 I 199 s chlSab2.chr5 43287639 1 - 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68769 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s rhiBie1.NW_016807452v1 10256 1 - 120202 c i rhiBie1.NW_016807452v1 I 649 I 202 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e colAng1.NW_012115910v1 6726402 0 - 6934359 C e cerAty1.NW_012006010v1 23447 0 - 38383 C a score=551736.000000 s hg38.chr14_KI270725v1_random 25440 200 + 172810 agggctgcacctttcgcagtgtggggtgggttgggggcgctatccagggtgtcattgcctgcattaggggtactggttggtagcactccacagggctgcactacccacggcagggagggtgtgttatgggtgctttctggggctgcagtgcccatggaggaggacaggttagggcactatcgggtatacgctactggcgg s panTro5.chrY 284276 200 + 26350515 agggctgtacctttctcagtgtgtggtgggttgggggcgctatccggggtgtcattgccttcattatgggtactggttggtagcactgtacagggctgcactgcccacggcagggagggtgggttatgagcactttctggggctgcaatgcccatggaggaggacaggttagggcactatcaggtatacactactggcgg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26168 200 + 66344 agggctgcacctttcgcagtatggggtgggttgggggcgctatccagggtgtcattgcctgcattaggggtactggttggtagcactgtacagggctgcactgcccacagcagagagggtgggttatgggtgctttctggggctacaatgcccatggaggaggacaggttagggcactatcgggtatatgctactggcgg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1771 198 - 112215 agggctgcacctttcgcagtgtggggtgggttgggggc-ctatccagggtgtcattgcctgcattaggggtactggttggtagcactgcacagggctgcactgcccacggcagggagggtgggttatgggtgctttctggggctgcaatgcccatggaggaggacaggttagggca-tatcgggtatacgctactggcgg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114470990 200 + 115148730 agggctgaacctttcgcagtgtggggtgggttgggggcgctatccagggtgtcattgcctgcattaggggtactggttggtagcactgtacagggctgcactgcccacggcagggagggtgggttatgggcgctttctggggctgcaatgcccatggaggaggacaggttagggcactatcgggtatatgctactggcag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 23447 200 - 38383 ggggctgcacttttgacagtgtggggtgggttgggggcactatccagggtgtcattgcttgcatcgggggtactagttggtagcactgtagagggctgcactgcttacagtacagggggtgggttataggcactttctggggccacaatgcccatggaggaggacaggtaaaggcactatcgggtatacgctagtggcga i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287640 198 - 75399963 ggggctgcactttttacagtagggggggggttaggggcactatccggggtgtcactgcctgcgttgggggtactggttggtagcactatacagggctgcgctgcccatgg--ttgggggtgggttatgggccctctctggggctgcattgcccatggagggggacaggttagggcactatcggatatacgctgctgtcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68770 198 + 473220 ggggctgcacttttcgcagtgtggggtgggttgggggtgctatccggggtgtcactacctgcattgggggtactggctggtagcactatacacggctgcactgcccacgg--cggtgggtgagtcatgggcactctttggggctgcaatgcccatggtgggggacaggttagggcactatcagatatacgctgctctcag i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6726402 200 - 6934359 ggggctgcacttttcgcagtgtggggtgggttgggggcactatccagggtgtcattgcctgcattgggggtattagttggtagcactgtagagggctgcactgcctatggtgcggggggtgggttatgggcactttctggggccgcagtgcccatggaggaggacaggtaaaggcactgtcgggcatacgctactggtgg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e rhiBie1.NW_016807452v1 10257 202 - 120202 I e papAnu3.chrUn_NW_003942124v1 14302 199 - 56717 I a score=23909.000000 s hg38.chr14_KI270725v1_random 25640 8 + 172810 cattgggg s panTro5.chrY 284476 8 + 26350515 ccttcggg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26368 8 + 66344 cattgggg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1969 8 - 112215 cattgggg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471190 8 + 115148730 cattgggg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 23647 8 - 38383 ctttgggg i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287838 8 - 75399963 cattgtgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68968 8 + 473220 cattgtgg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6726602 8 - 6934359 cgttgggg i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 10459 8 - 120202 cattgtgg i rhiBie1.NW_016807452v1 I 202 I 787 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e papAnu3.chrUn_NW_003942124v1 14302 199 - 56717 I a score=4490.000000 s hg38.chr14_KI270725v1_random 25648 2 + 172810 ga s panTro5.chrY 284484 2 + 26350515 ga i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26376 2 + 66344 ga i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1977 2 - 112215 ga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471198 2 + 115148730 ga i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 23655 2 - 38383 gg i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287846 2 - 75399963 gg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68976 2 + 473220 gg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6726610 2 - 6934359 gg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e rhiBie1.NW_016807452v1 10467 787 - 120202 I e papAnu3.chrUn_NW_003942124v1 14302 199 - 56717 I a score=15693.000000 s hg38.chr14_KI270725v1_random 25650 5 + 172810 cggag s panTro5.chrY 284486 5 + 26350515 cggag i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26378 5 + 66344 ccgag i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1979 5 - 112215 cggag i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471200 5 + 115148730 tggag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 23657 5 - 38383 tggag i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 14501 5 - 56717 tgggg i papAnu3.chrUn_NW_003942124v1 I 199 I 797 s chlSab2.chr5 43287848 5 - 75399963 tggag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68978 5 + 473220 tggag i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6726612 5 - 6934359 tggag i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e rhiBie1.NW_016807452v1 10467 787 - 120202 I a score=1080293.000000 s hg38.chr14_KI270725v1_random 25655 414 + 172810 gtggggggcgctattgagggcaggactagccgtggagggcgggcgagttcggtgctatcaggggctgcactgctggcggcggTCAACAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGGCAACCCACTCTTGGTCATACTGGAGTGTGGCAGGGCA-CGCAGCGTTTGCATGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCGTGGTTCCTGGGCCTATGCACTCTGGGTCTGTGCCTCAGAGGCTGCCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGCGTGGAGGTGTCCGGAACAGGAATTGGCACCTGGGTGTGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGTTCCCCGAGGAGTGCAGCCC s panTro5.chrY 284491 412 + 26350515 gtggggggcgctattgagggcaggactagcagtggagg-caggcgcgttcagtgctatcaggggctgcacttctggtggcagTCAGCAGAG---------------TTGGCATCTAAGGAAGGAGTGGTTCTCCTCTCCCT-GGCTCCACACTCCAGAGGGCGACCCACTCTTCGTCATACTGGAGTGCGGCAGG-CA-CGCAGCGTTTGCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCTACCGTGGTTCCCGGGCCTATGCACTCTGGGTCTGTGCCTCAGAGGCTGCTAGGCA-CCCCTGG-----------GGACTCCACGGGGGATGGGGCCCTGTGTGTGGAGGCTTCCGGAACAGGAATTGGTACCTGGGTGCGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCCTCTCCTGCTCCCCAAGAAGTGCAGCCA i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26383 412 + 66344 gt-gggggtgctattgagggccggactagctgtggggg--gggtgagttcggtgctatcaggggctgcactgctggcagcggTCAGGAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGGCGACCCACTCTTGGTCATATTGGAGTGCAGCAGGGCACCACAGCATTTGCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACTGTGGTTCCTGGGCCTGTGCACTCTGGGTCTGTGCCTCAGAGGCTGCCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGTATGGAGGCGTCCAGAACAGGAATTGGCACCTAGTTGCGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGCTCCCCGAGGAGTGCAGCCC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 1984 414 - 112215 gtgaggggcgctattgagggcaggactagccgtggagcgggggcgagttcggtgctatcaggggctgcactgctggtggcagTCAACAGAG---------------TTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGGCGAACCACTCTTGGTCATACTGGAGTGCGGCAGGGCA-CGCAGCGTTTGCATGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCGTGGTTCCTGGGCCTGTGCACTCTGGGTCTGTGCCTCAGAGGCTGCCAGGCA-CCCCTGG-----------GGACACCACGGGGGACAGGGCCCTGTGTGTGGAGGCGTCCGGAACAGGAATTGGCACCTGGGTGCGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGTTCCCCGAGGAGTGCAGCCC i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471205 412 + 115148730 gtggggggcactattgagggcaggagtagctgtggaggtggggcgagttcgttgctatcagggactgcactactagcggcggTCAGCAGAG---------------TTGGCTTCCAAGGAAGGAGTGGTTCTCCTCTCCCT-GACTCCACACTCCAGAGGCCGACTTACTCTTGGTCATACTGGAGTGCGGCAGG-CG-CACAGCATTTGCGTGGGTATCCTGAGCAT-GCAGAGCCCCCACACCCACCGTGGTTCCTGGGCCTGTGCACTCTGAGTCTGTGCCTCAGAGGCTGCCAGGCA-CTCCTGG-----------GGACACCACAGGGGACAGGGCCCTGTGCATGGAGGCGTCTGGAACAGTAATCAGCACCTGGGTGCGGAGGGCT-GGCTGGGTCTGAATTTTTCTGCTTCTCCTGCTCCCTGAGGGGTGCAGCCC i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 23662 439 - 38383 gtggggtgcgctattgagggcaggactggccgtgaagcgggggtgagttcggtgctatcaggggctgcactgctggcggcagTCAGCAGAGTTGGCAGCAACAGT-GTGGCATCCAAGGAAGGAGCGGTTCTGCTCTCCCTGGACGCCACACTCCAGAGGGCCACCTACTCTTGCTCATACTGGAGCATGGCAGG-CG-CACAGTGTTTCCGTGGGAATCCTGAGCGTGGCAGAGACCCCACACCCACCGTGGCTCCTGGGCCCGTGCACTCTGGGTCTGTGCCTTAG-GGCTGCCAGGCG-CCCAGGGTATGGAGTAGCAGACACCATGGGGGAAAGGGCCCTGTGCGTGGAGACATCCAGAACAGGAATTGGCACCTGGGTGTGGAGGGCTGGGCTGGGTCTGAATTTTTCTGCTGCTCCTGTTCCCCGAGAATTGCAGCCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43287853 437 - 75399963 gtgggggatgctattaagggcaggactacctgtggag-aggggcgagttgggtgctatcaggggctgcgctgctggtggcagTCGGCAGAGGTGGCAGCAACAGTGGTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCTGGACTCCACACTCCAGAGGGCGACCTATTCTTACTCATACTGGAGTGCGGCAGG-TG-CACAGTGTTTCCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCGCCATGGTTCCTGGGCCCATGCACTCTGGGTCTGTGCCGCAGACACTGCCTGGCACCCCCAGGTATGGAGTTGCGGACACCATAGGGGACAGGGCCCTGTGTGTGGAGGCATTGGGAACAGGATATGGCACCTGGGTGGGGAGGGTT-GGCTGGGTCTGAG--TTTCTGCTGCTCCTGCTCCCCGAGGAGTGCAA-CC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 68983 436 + 473220 gtggggg-tgctattgagggcaggactacctgtggag-aggggcgagttgggtgctatcaggaactgcactattggcaacagtcggcagAGGTGGCAGCAACAGTGGTGGCATCCAAGGAAGGAGTGGTTCTCCTCTCCCTGGACTCCACACTTCAGAAGGCGACCTACTCTTACTCATACTGGAGTGCGGCAGG-CA-CACAGTGTTTCCGTGGGAATCCTGAGCATGGCAGAGCCCCCACACCCACCATGATTCCTGAGCCCATGCACTCTGGGTCTGTGCCGCAGAGACTGCCTGGCTATCCCAGGTATGGAGTAGCGGACACCACGGGGGACAGGGCCCTTTGCGTGGAGGCATCCGAAACAGGAATTGGCACCTGGGTGGGGCGGGCT-GTCTGGGTCTCAG--TTTCTGCTGCTCCTGCTCCCCAAGGAGTGCAA-AC i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6726617 439 - 6934359 gtagggtgcgctattgagggcaggactggccgtgaagcggggatgagtttggtgctgtcaggggctgcactgctgggggcagTCAGCAGAGTTGGCAGCAACAGT-GTGGCATCCAAGGAAGGAGCAGTTCTCCTCTCCCTGGACTCCACACTCCAGAAGGCCACCTACTCTTGCTCATACTGGTGCATGGCAGG-CG-CACAGTGTTTCCGTGGGAATCCTGAGCGTGGCAGAGCCCCCACACCCACTGTGGCTCCTGGGCCCATGCACTCTGGGTCTGTGCCTTAGAGGCTGCCAGGCG-CCGCGGGTATGGAGTAGCAGACACCATGGGGGACAGGGCCCTGTGCATGGAGGCATCCGGAACAGGAATTGGCACCTGGGTGTGGAGGGAT-GGCTGGGTCTGAATTTTTCTGCTGCTCCAGTTCCCTGAGGAGTACAGCCC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8995643 1095 + 13868332 I e rhiBie1.NW_016807452v1 10467 787 - 120202 I e papAnu3.chrUn_NW_003942124v1 14506 797 - 56717 I a score=1722.000000 s hg38.chr14_KI270725v1_random 26069 1 + 172810 C s panTro5.chrY 284903 1 + 26350515 T i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26795 1 + 66344 C i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2398 1 - 112215 C i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8996738 1 + 13868332 T i ponAbe2.chr2a_random I 1095 I 252 s nomLeu3.chr7b 114471617 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24101 1 - 38383 C i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288290 1 - 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69419 1 + 473220 C i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727056 1 - 6934359 C i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 10467 787 - 120202 I e papAnu3.chrUn_NW_003942124v1 14506 797 - 56717 I a score=692126.000000 s hg38.chr14_KI270725v1_random 26070 252 + 172810 GGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGAATCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCCAGACAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCTGGCATGACAAGTTGAGGCT-CTAACCCTTCCACTCCTCACAACTTCCtctaggcttttctggctttgcccgcccagctgctccgtgcc s panTro5.chrY 284904 252 + 26350515 GGTGGGCCCAGTGGTTCCTGTGGAGTGGGGAGCTGGGTGCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCCGGCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCTCCTGCCACCCAGTGGCTGGCATGATAAGTTGAGGCT-CTAACCCTTCCATCGCTCACATCTTCCtctaggcttttctggctttgcctgcccagctactccatgcc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 26796 252 + 66344 AGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGGTGCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCCAGCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCCAGCATGACAAGTTGAGGCT-CTAACCCTTCCACCTCTCAAATCTTCCtctaggcttttctggctttgcccacccagctgctccgtgcc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2399 251 - 112215 GGTGGGCCCAATGGTTCCTGTGGAGTGGGGAGCTGGGTGCTGTGGTGTCTCCAGCACCCACCCCAGACCCCAGTTCCC-GCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCCGGCATGACGAGTTGAGGCT-CTAACGCTTCCACTCCTCACAACTTCCtctaggcttttctggctttgcccgcccagctgctccgtgcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471618 252 + 115148730 GGTGGGACCAATGGTTCCTGTGGAGTGGGGAGCTGGGTGCTGTGGTGTCTCCAGCACCCAGCCCAGACCCCAGTTCCTGGCCAGCTTTGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGTGTGTTCTGAAACTGGCCCCTGCTACCCAGTGGCTGGCATGACAAGTTGAGGCT-CTAACCTTTCCACCCTTCGCATCTTAttctaggctcctctggctttgcccgcccagctgctccgtgcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24102 247 - 38383 AGTGGGCCCAGTGGTTCCTGTGGAGTGGGGAGCTGGG------CGTGTCTCCAGCACCCACTCCAGGCCCCAGTTCCTGGCCAGCTTGGGCCAAAAGGAGAGGCTGAACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTACCACCCAGTCCCTGGCATGACAAGTTGAGGCTCCTAATGATACCACCCCTCACATCTTCCtctaggcttttctggctttgcccgcccagctgctctgtgcc i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288291 251 - 75399963 AGTTGGCCCAGCAGTTCCTGTGGAGTGGGGAGCTGGGGGCTGTGGCGTCTCCAACACCCACACCATGCCCCAGTTCCTGGCCAGTGTGGGTCAAAAGGAGAGGCTGAACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGGCCCCTGCCACCCAGTGGCTGGCATGACAAGGTGAGGCT-CTAACGCTACCACCCC-TGCATCTTCCtctaggcttttctggttttgcccacccaactgctccatgcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69420 252 + 473220 AGTTGGCACAGCGGTTCCTGTGAAGTGGGGAGCTAGGGGCTGTGGCGTCTCCAACACCCACGCCATCCTCCAGTTCCTGGCCAGCTTGGGCCAAAAGGAGAGGCTGGACTTTGGAGGGTGGGTGTGAGTGCCTTTGCTGAAACTGCCCCCTGCCACCCAGTGGCTGGCATGACAAGGTGAGGCT-CTAACGCTACCACCCCTTGCATCTTCCTCTAGGCATTTCTGGCTTTGCCTACCCaactgctccatgcc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727057 236 - 6934359 GGTGGGTCCAGTGGTTCCTGTGGAGTGGGGAGCTGGGCACTGTGGTATCTCCAGCACCTACTCCAGGCCCCAGTTCCCAGCCAGCTTGGGCCAAAAGGGGAGGCTGAACTTTGGAGGGTGGGTGCGAGTG-----------------CCCTGCCACCCAGTCCCTGGCATGACAAGTTGAGACTCTTAATGCTACCACCCCTCGCATCTTCCTGTaggcttttctggctttgtcttcccagctgctctgtgcc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8996739 252 + 13868332 I e rhiBie1.NW_016807452v1 10467 787 - 120202 I e papAnu3.chrUn_NW_003942124v1 14506 797 - 56717 I a score=13095.000000 s hg38.chr14_KI270725v1_random 26322 3 + 172810 agg s panTro5.chrY 285156 3 + 26350515 agg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27048 3 + 66344 agg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2650 3 - 112215 agg i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8996991 3 + 13868332 agg i ponAbe2.chr2a_random I 252 I 305 s nomLeu3.chr7b 114471870 3 + 115148730 agg i nomLeu3.chr7b C 0 I 3 s cerAty1.NW_012006010v1 24349 3 - 38383 agg i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288542 3 - 75399963 agg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69672 3 + 473220 agg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727293 3 - 6934359 agg i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 10467 787 - 120202 I e papAnu3.chrUn_NW_003942124v1 14506 797 - 56717 I a score=230577.000000 s hg38.chr14_KI270725v1_random 26325 90 + 172810 aagaggaggagacacctagagcctgcaacaccatggctcgcctcgctgcaggtggatggcagtgacggagactgcagtgcgccagagcgg s panTro5.chrY 285159 90 + 26350515 aggaggaggagacacctagtgcctgcaacaccatgactcgcctcgctgcgggtgggtggcagcgacggagactgcagtgtgccagagcgg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27051 90 + 66344 aggaggaggagacacctagagcctgcaacaccacggctcgcctcgctgcaggtgggtggcagcaatggagactgcagtgcgccaaagcag i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2653 89 - 112215 aggaggaggagacacctagagcctgcaacaccacggctcgcctcgctgcgggtgg-tggcagtgacggagactgcagtgcgccagaacgg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471876 90 + 115148730 agcagaaggagacacctagggcttgcgacaacatggctcaccttgctgcgggtgggtggcagcgacggagactgcattgcgccggagtgg i nomLeu3.chr7b I 3 C 0 s cerAty1.NW_012006010v1 24352 90 - 38383 aggaggaggagacacctggagcctgtgacaccacggtttcccttgctgagggtgggtggcagcgacggagactgcagcgtgctggaacgg i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288545 90 - 75399963 aggaggtggaaacacctggagcctgcgacaccatggctcgcctcactgtggcttggtggtggcgacagagactgcagtgtgctggagtgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69675 90 + 473220 aggaggaggaaacacctggagcttgtgacactgtggttcacttcactgcagcttggtggtggcaacagagactgcagcacgccagagcgg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727296 90 - 6934359 aggaggaggagacacctggagcctgtgacaccatggcttgcctcgctgagggtgggtggcagcgacggagactgcagcgtgctggaacgg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e rhiBie1.NW_016807452v1 10467 787 - 120202 I e papAnu3.chrUn_NW_003942124v1 14506 797 - 56717 I a score=66823.000000 s hg38.chr14_KI270725v1_random 26415 17 + 172810 taggagagcggccgcgc s panTro5.chrY 285249 17 + 26350515 taggagagcggctgggc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27141 17 + 66344 taggagagCGGCCACGC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2742 17 - 112215 taggagagcggccgcgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471966 17 + 115148730 taggagagtggctgcgc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24442 17 - 38383 taggagagtgaccacac i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 15303 17 - 56717 taggagggcagccacgc i papAnu3.chrUn_NW_003942124v1 I 797 I 25 s chlSab2.chr5 43288635 17 - 75399963 taggagggcagccacgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69765 17 + 473220 taggagggcagccatgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727386 17 - 6934359 taggagagtgaccgtgc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 11254 17 - 120202 taggagggcagccacgc i rhiBie1.NW_016807452v1 I 787 I 42 e ponAbe2.chr2a_random 8996994 305 + 13868332 I a score=62344.000000 s hg38.chr14_KI270725v1_random 26432 25 + 172810 taggagggcaggcggctgcaggcag s panTro5.chrY 285266 25 + 26350515 taggagggcaggcggctgcagccag i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27158 25 + 66344 TAGGAGGGCAGGCAGCTGCAGCCAG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2759 24 - 112215 taggagggcagg-ggctgcaGGCAG i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114471983 25 + 115148730 taggaggacacgtggctgcagccag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24459 25 - 38383 taggaggtcaggcggccagagccag i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288652 25 - 75399963 taggagggcaggtggctgtggccag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69782 25 + 473220 taggagggcaggtgtctgcggccag i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727403 25 - 6934359 taggaggtcaggcggctggagCCAG i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e rhiBie1.NW_016807452v1 11271 42 - 120202 I e papAnu3.chrUn_NW_003942124v1 15320 25 - 56717 I a score=7830.000000 s hg38.chr14_KI270725v1_random 26457 2 + 172810 gg s panTro5.chrY 285291 2 + 26350515 gg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27183 2 + 66344 GG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2783 2 - 112215 GG i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472008 2 + 115148730 gg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24484 1 - 38383 -g i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 15345 2 - 56717 gg i papAnu3.chrUn_NW_003942124v1 I 25 C 0 s chlSab2.chr5 43288677 2 - 75399963 gg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69807 2 + 473220 gg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727428 2 - 6934359 GG i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e rhiBie1.NW_016807452v1 11271 42 - 120202 I a score=10892.000000 s hg38.chr14_KI270725v1_random 26459 3 + 172810 ttg s panTro5.chrY 285293 3 + 26350515 ttg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27185 3 + 66344 TTG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2785 3 - 112215 TTG i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472010 3 + 115148730 ttg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24485 3 - 38383 gtg i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 15347 3 - 56717 ctg i papAnu3.chrUn_NW_003942124v1 C 0 I 717 s chlSab2.chr5 43288679 3 - 75399963 ctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 69809 3 + 473220 ctg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727430 3 - 6934359 TTG i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 11313 3 - 120202 ttg i rhiBie1.NW_016807452v1 I 42 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I a score=2395.000000 s hg38.chr14_KI270725v1_random 26462 1 + 172810 g s panTro5.chrY 285296 1 + 26350515 g i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27188 1 + 66344 G i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2788 1 - 112215 G i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472013 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24488 1 - 38383 g i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288682 1 - 75399963 a i chlSab2.chr5 C 0 I 68 s manLeu1.NW_012099899v1 69812 1 + 473220 a i manLeu1.NW_012099899v1 C 0 I 62 s colAng1.NW_012115910v1 6727433 1 - 6934359 G i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 11316 1 - 120202 g i rhiBie1.NW_016807452v1 C 0 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I a score=9003.000000 s hg38.chr14_KI270725v1_random 26463 4 + 172810 gagT s panTro5.chrY 285297 4 + 26350515 ggAT i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27189 4 + 66344 GGGT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2789 4 - 112215 GAGT i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472014 4 + 115148730 gggt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24489 4 - 38383 gggT i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 69875 4 + 473220 GAGG i manLeu1.NW_012099899v1 I 62 C 0 s colAng1.NW_012115910v1 6727434 4 - 6934359 GGGT i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 11317 4 - 120202 gggt i rhiBie1.NW_016807452v1 C 0 I 650 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e chlSab2.chr5 43288683 68 - 75399963 I a score=41438.000000 s hg38.chr14_KI270725v1_random 26467 19 + 172810 CAGGCTTACAGCGATGGAT s panTro5.chrY 285301 19 + 26350515 CAGGCTTACAGCGATGGAC i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27193 19 + 66344 CAGGCTTACAGCGATGGAC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2793 19 - 112215 CAGGCTTACAGCGATGGAC i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472018 19 + 115148730 cagGCTTACAGCAATGGAC i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24493 19 - 38383 CAGGCTTAGAGCAATGGCC i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 69879 19 + 473220 CAGGCCTACAGTGGTGGCC i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727438 19 - 6934359 CAGGCTTACAGCGATGGCC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e chlSab2.chr5 43288683 68 - 75399963 I a score=364046.000000 s hg38.chr14_KI270725v1_random 26486 144 + 172810 GGGCTGCAGCAGTGGCCAGGTAGTAGGAGCCTTGTAGGGAGGGCTGGTGCATTGGCAATGGGCCTGGCTTTGCCCTGCGCCTGCCGTGGATCTGGCCCTGTACTGCCCTG--CCTTGCCCTGTACCTGCCCTACTGTTACCTGGAC s panTro5.chrY 285320 111 + 26350515 GGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAGGGCTGATGCATtggcaatgggcctggctt---------------------------------tgccctg--ccttgccctgtactttccctactcttacctggac i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27212 138 + 66344 AGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAAGGCTGGTGCATtggcaatgggcctggcttttccctgcccctgccatggatttggccctgtactgccctg--ccttgccctgtacctgccc------tacctggac i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2812 144 - 112215 GGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTGTAGGGAGGGCTGGTGCATtggcaatgggcctggctttgccctgtgcctgccgtggatctggccctgtactgccctg--ccttgccctgtacctgccctactgttacctggac i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472037 144 + 115148730 TGGCTGCAGCAGTGGCCAGGTGGTAGGAGCCTTATAGGGAGGGCCGGTGCATtggcaatgggactggctttgccctgcccctgccgtggatctggccctgtactgccctg--ccttgccctgtacctgccctactgttacctggac i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24512 144 - 38383 GGGCTGCGGCAGTGGCCGGGTGGTAGAAGCCTTGTAGGGTGGGCTGTTGCATTGGCAATGGGCCTGGCTTTGCCCTGCCACTGCCGTGGACCTGGCCCTGTACTGCCCTG--CCTTGCCCTGGCCCTGCCCTACTGTTACCTGGAC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288751 146 - 75399963 GGCCTACAGCAGTGGCCAGGAGGTAGGAGCCTTGTAGGGAGGGTCAGTGAATtggcaatgggcctgactctgccttgcacctgccatggacctggccctgtactgccccgcccctgcccctggacctgccctaccgttacctggac i chlSab2.chr5 I 68 C 0 s manLeu1.NW_012099899v1 69898 139 + 473220 AGGCTGCAGCAGTCGCCAGGTGGTAGGAGCCTTATAGGGAGAACCAGTGAATtggcaatggacctggctctgccttgcccctgccatggacctggccctgtactgccctg-------ccctggacctgccctaccgttatgttgac i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727457 144 - 6934359 AGGCTGCGGCGGTGGCCAGGTGGTAGAAGCCTTGTAGGGAGGGCTGTTGCATTGGCAATGGGCCTGGCTTTGCCCTGCCACTGCTGTAGACCTGGCCCTGTACTGCCCTG--CCTTGCCCTGGCCATGCCCTACTGTTACCTGGAC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8996994 305 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I a score=5348.000000 s hg38.chr14_KI270725v1_random 26630 2 + 172810 TG s panTro5.chrY 285431 2 + 26350515 tg i panTro5.chrY C 0 C 0 s ponAbe2.chr2a_random 8997299 2 + 13868332 tg i ponAbe2.chr2a_random I 305 I 491 s nomLeu3.chr7b 114472181 2 + 115148730 tg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24656 2 - 38383 TG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288897 2 - 75399963 tg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70037 2 + 473220 tg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727601 2 - 6934359 TG i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 11321 650 - 120202 I e gorGor5.CYUI01000689v1 2956 0 - 112215 C e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e panPan2.chrUn_NW_014019468v1 27350 0 + 66344 C a score=183979.000000 s hg38.chr14_KI270725v1_random 26632 92 + 172810 TCTCGGCCCTGTCCTGCTCTGGTCCCATCCTGACCCTGTCTTGGCCCTGTGCTACCCTGTCCCTGCCCTGGTCTTGCCCT---GGCACTGGCCCT s panTro5.chrY 285433 92 + 26350515 tctcggccctgtcctgctctggtcccatcctgacactgtcttggccctgtgttaccctgtccctgccctgttcttgccct---ggcactgtccct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27350 92 + 66344 tctcgtccctgtcctgctctggtcccatcctgactctgtcttagccctgtgctaccctgtccctgccctggtcttgccct---ggcactggccgt i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 2956 95 - 112215 tctcggccctgtcctgctctggtcccatcctgaccctgtcttggccccgtgctaccctgtccctgccctggtcttgccctggcggcactggccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472183 91 + 115148730 -tcctgctctggtcccatctggtcccatcctgaccctgtcttggccctgtgctaccctgtccctgccctggttttgcctt---ggcactggccct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24658 54 - 38383 TCTCGGCCCTGCCCTGCTCTGATCCCATCCTGG--------------------------------------TTTTGCCTT---TGCACTGGCCTT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288899 92 - 75399963 tctcaaccctgccctgctctggccccaccctggccctgtcttggccctgtgctaccctgtccctgccctgattctgccct---tgtactggccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70039 92 + 473220 tctcagccctgccctgctctgaccccatcctggcctggtcttggccctgtgctactctgtccctgccctggtcctgccct---tgtactggccct i manLeu1.NW_012099899v1 C 0 I 59 s colAng1.NW_012115910v1 6727603 53 - 6934359 TCTCGGCCCTGCCCTGCTCTGGT-CCATCCTGG--------------------------------------TCTTGCCTT---TGCACTGGCCCT i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I a score=17154.000000 s hg38.chr14_KI270725v1_random 26724 10 + 172810 GCCCTGAACC s panTro5.chrY 285525 10 + 26350515 gccctgaacc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27442 10 + 66344 gccctgaacc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3051 9 - 112215 gccc-gaacc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472274 10 + 115148730 gccctgaacc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24712 10 - 38383 TCCCTGAACC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43288991 10 - 75399963 tccctggctc i chlSab2.chr5 C 0 I 51 s colAng1.NW_012115910v1 6727656 10 - 6934359 TCCCTGAACC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e manLeu1.NW_012099899v1 70131 59 + 473220 I a score=13609.000000 s hg38.chr14_KI270725v1_random 26734 21 + 172810 TGCACTGGCCTGACCTtggct s panTro5.chrY 285535 16 + 26350515 tgcactggcctgacct----- i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27452 21 + 66344 tgcactggcctgaccttggct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3060 21 - 112215 tgcactggcctgaccttggct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472284 16 + 115148730 tgcactggcctgggct----- i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24722 12 - 38383 TGTGCTGGCCCG--------- i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6727666 12 - 6934359 TGTGTTGGCCCA--------- i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e manLeu1.NW_012099899v1 70131 59 + 473220 I e chlSab2.chr5 43289001 51 - 75399963 I a score=1146.000000 s hg38.chr14_KI270725v1_random 26755 2 + 172810 ct s panPan2.chrUn_NW_014019468v1 27473 2 + 66344 ct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3081 2 - 112215 ct i gorGor5.CYUI01000689v1 C 0 C 0 s manLeu1.NW_012099899v1 70190 2 + 473220 ct i manLeu1.NW_012099899v1 I 59 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e colAng1.NW_012115910v1 6727678 0 - 6934359 C e chlSab2.chr5 43289001 51 - 75399963 I e cerAty1.NW_012006010v1 24734 0 - 38383 C e nomLeu3.chr7b 114472300 0 + 115148730 C e panTro5.chrY 285551 0 + 26350515 C a score=551537.000000 s hg38.chr14_KI270725v1_random 26757 188 + 172810 ggccctggctctggccctgCCCCTTGTCCTGACCCTGGTCCTGTCATGGCACTGGCCCTGCCAATGGTCATGGTCCTGCCCCTGTTCTGGCCCTGACCTGGCCTTGGAAATGTCCTG----------------GCCCTGCTTTGGCCCATCCCTGCCCTGGCCCCACCATGGGCCTGCCTGTTCTGCCCTCTCCTGGCACTGAC s panTro5.chrY 285551 183 + 26350515 -----tggctctggccttgccccttgtcctgaccctggtcatgtcatggcactggccctgccagtggtcatggtcctactcctgttctggccctgacctggccttggacatgtcctg----------------gtcctgctttggcccatccctgccctggccccaccatgggcctgcctgttctgttctctcctgggactgat i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27475 188 + 66344 ggccctggctctggccctgccccttgtcctgaccctggtcctgtcatggcactggccctgccaatggtcatggtcctgctcctattctggccctgacctggccttggacatatcctg----------------gccctgctttggcccatccctgccctggccccaccatgggcctgCCTGTTCTGCCCTCTCCTGGCACTGAC i panPan2.chrUn_NW_014019468v1 C 0 M 138 s gorGor5.CYUI01000689v1 3083 188 - 112215 ggccctggctctggccctgccccttgtcctgaccctggtcctgtcatggcactggccctgccaatggtcatggtcctgctcctgttctggccctgacctggccttggaaatgtcctg----------------gccctgctttggcccatccctgccctggccccaccatgggcctgcctgttctgccctctcctggcactgac i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472300 183 + 115148730 -----tggctctggcgctgccccttgtcctgaccctggtcctgtcatggcactggccctgccagtagtcatggtcctgctcctgttctggccctgacctggccttggacatgtcctg----------------gccctgctttgtcccatccctgccctggccccaccatgggcctgcctgttctgccctctcctggcactgac i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24734 203 - 38383 -GCCTTGGCTCTGGCCCTGCCTCTTGTCCTGACCCTGGTCCTGTCATGGCACTGGCCCTGCTAGTGGTCATGGTCCTGCTCCTGTTCTGGCCTTGACCTGGCCTTGGACGTGTCCTGGCCCAGATTTGTTCTGGCCCTGCCTTGGCCCATCCCTGCCCTGGCCCCACCATGGCCCTGCCTGTTGTGCCCTCTCCTGGCACTGAC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289052 203 - 75399963 ggccttggctctggccctgcc-cttgtcctgaccctggtcgtgtcatggccctggccttgccaatggtcatggtcctggtcctgttctggctctgacctgtacttggacatgtcctggcccggatttgttgcagccctgccttggcccatccttgccctggccccaccatggtgctgcctgttctgccctctcctgacactgac i chlSab2.chr5 I 51 C 0 s manLeu1.NW_012099899v1 70192 204 + 473220 ggccttggctctggctctgcctcttgtcctgaccctggtcctgcaatggcactggccctgccaatgctcatggtcatggtcctgttctggctctgacctggacatggacatgtgctggccctgatttgtcccagccctgccttggcccatccctgtcctggccccaccatggtcctgtctgttctgccctctcctggcactaac i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727678 187 - 6934359 -GCCTTGGCTCTGGCCCTGCCTCTTGTCCTGACCCTGGTCCTGTCATGGCACTGGCCCTGCTAATGGTCATGGTCCTGCTCCTGTTCTGGTCTTGTCCTGGCCTTGGACATGTCCTG----------------GCCCTGCTTTGGCCCATCCCTGCCCTGGCCCCACCATGGCCTTGCCTGTTCTGCCCTCTCCTGGCACTGAC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I a score=279221.000000 s hg38.chr14_KI270725v1_random 26945 142 + 172810 CTTGCCCTGTCATGGCCCAGTGGTGCCATTGCCCTGCCTTACCCTGCGCTGGTTGTGCCTTGGCCCCGCTTGGTGCTGGCCGCT-----------CCCTGGACCTGCCCTGACCCTGCCTTGGCTTTTGCCCTGCCCTCACTATGGCCTGGCC s panTro5.chrY 285734 142 + 26350515 cttgacctgtcatgtcccagtggtgccattgccctgccttaccctgagctggttgtgccttggccctgcttggtgccggccact-----------ccctggaccttcccagaccctgcctcgacttttgccctgccctcactatggcctggcc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 3271 153 - 112215 cttgccctgtcatggcccagtggtgccattgccctgccttaccctgcgctggttgtgccttggccccgcttggtgctggctgctccctggacctgccctggacctgccctgaccctgccttggcttttgccctgccctcactatggcctggcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472483 142 + 115148730 cttgcgctgtcattgcccagtggtgccattgccctgcgttaccctgtgctgcttgtgccttggccccgcttggtgctggctgct-----------ccctggacctgccctgaccctgccttggcttttgccctgccctcactatggcctggtc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 24937 142 - 38383 TTTGCCCTGTCATGGCACAGTGGTGCCATTGACCTGCCTTCCACTGCCCTGGTTGTGCCCTGGCCCTGCCTGGCACTGGCCTCT-----------CCCTGGACCTGCTCTGCCCCTGCCTTGGCCTTTGCCCTGTCCTCACTATGGCCTGGCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289255 132 - 75399963 tttgccctgtcatggctcagtggtgccattg----------ccctgctctggttgtgccctgatcccacttggcactggccgct-----------ccctggatctgccctgaccctgccttggtttttgccctgctctcacgatggcctggct i chlSab2.chr5 C 0 I 28 s manLeu1.NW_012099899v1 70396 140 + 473220 cttgccctgtcatggcccagtga-gccattgccctgccttaccctgctctggttttgccctggccccacctggcactggccact-----------ccctggacctgacctgaccctaccttggcttttgccct-ccctcactatggcctggct i manLeu1.NW_012099899v1 C 0 I 28 s colAng1.NW_012115910v1 6727865 131 - 6934359 TTTGCCCTGTCATGGCACAGTGGTACCATTGACCTGCCTTACAC-----------TGccctggccctgcctggcactggcctct-----------tcctggacctgctctggccctgccttggccttcgccctgccctcactatggtctggcc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e papAnu3.chrUn_NW_003942124v1 15350 717 - 56717 I e panPan2.chrUn_NW_014019468v1 27663 138 + 66344 M a score=3600.000000 s hg38.chr14_KI270725v1_random 27087 1 + 172810 C s panTro5.chrY 285876 1 + 26350515 c i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 3424 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472625 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25079 1 - 38383 C i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 16067 1 - 56717 c i papAnu3.chrUn_NW_003942124v1 I 717 C 0 s chlSab2.chr5 43289415 1 - 75399963 c i chlSab2.chr5 I 28 C 0 s manLeu1.NW_012099899v1 70564 1 + 473220 c i manLeu1.NW_012099899v1 I 28 C 0 s colAng1.NW_012115910v1 6727996 1 - 6934359 c i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11321 650 - 120202 I e panPan2.chrUn_NW_014019468v1 27663 138 + 66344 M a score=22095.000000 s hg38.chr14_KI270725v1_random 27088 5 + 172810 TGGCC s panTro5.chrY 285877 5 + 26350515 tggcc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 3425 5 - 112215 tggcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472626 5 + 115148730 tggcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25080 5 - 38383 TGGCC i cerAty1.NW_012006010v1 C 0 I 28 s papAnu3.chrUn_NW_003942124v1 16068 5 - 56717 tggcc i papAnu3.chrUn_NW_003942124v1 C 0 I 446 s chlSab2.chr5 43289416 5 - 75399963 tggcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70565 5 + 473220 tggcc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6727997 5 - 6934359 tggcc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 11971 5 - 120202 TGGCC i rhiBie1.NW_016807452v1 I 650 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e panPan2.chrUn_NW_014019468v1 27663 138 + 66344 M a score=1757.000000 s hg38.chr14_KI270725v1_random 27093 1 + 172810 C s panTro5.chrY 285882 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 3430 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472631 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25113 1 - 38383 C i cerAty1.NW_012006010v1 I 28 C 0 s chlSab2.chr5 43289421 1 - 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70570 1 + 473220 c i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728002 1 - 6934359 c i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 11976 1 - 120202 T i rhiBie1.NW_016807452v1 C 0 I 861 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I e panPan2.chrUn_NW_014019468v1 27663 138 + 66344 M a score=71880.000000 s hg38.chr14_KI270725v1_random 27094 38 + 172810 TAGCCCTGGTCCTGCCATATCCCTGGCCCTGC------------------CCTTAT s panTro5.chrY 285883 38 + 26350515 tagccctggtcctgccatatccctcaccctgc------------------ccttat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 3431 38 - 112215 tagccctggtcctgccatatccctggccctgc------------------ccttat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472632 38 + 115148730 tagctctggccctgccatatccctggccctgc------------------ccttat i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25114 38 - 38383 TAGCCCTGGTTCTACCGTATCCCTGGCCTTGC------------------CCTTAT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289422 56 - 75399963 tgaccctggtcctgccatatccctggccctggccctggccctggccctgctcttat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70571 32 + 473220 tgaccctggtcctgccatatccctggccctgg------------------------ i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728003 38 - 6934359 tagccctggtcctgccataaccctggccttgc------------------ccttat i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I e panPan2.chrUn_NW_014019468v1 27663 138 + 66344 M a score=7294.000000 s hg38.chr14_KI270725v1_random 27132 3 + 172810 CCA s panTro5.chrY 285921 3 + 26350515 cca i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27801 3 + 66344 CCA i panPan2.chrUn_NW_014019468v1 M 138 C 0 s gorGor5.CYUI01000689v1 3469 3 - 112215 cca i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472670 3 + 115148730 cca i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25152 3 - 38383 CCA i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289478 3 - 75399963 cca i chlSab2.chr5 C 0 C 0 s colAng1.NW_012115910v1 6728041 3 - 6934359 ccg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997301 491 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I e manLeu1.NW_012099899v1 70603 0 + 473220 C a score=73298.000000 s hg38.chr14_KI270725v1_random 27135 23 + 172810 GGCCTTGCCCCTGCTGCTGCCCT s panTro5.chrY 285924 23 + 26350515 ggccctgcccctgctgctgccct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27804 23 + 66344 GGCCCTGCCCCTGCTGCTGCCAT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3472 21 - 112215 ggcctg--ccctgctgctgccct i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8997792 23 + 13868332 ggccctgcccctgctgctgccct i ponAbe2.chr2a_random I 491 I 677 s nomLeu3.chr7b 114472673 23 + 115148730 ggccctgcccctgctgctgccct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25155 23 - 38383 GACCCTGCCCCTGCCTCTGCCCT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289481 23 - 75399963 ggccctgcccctgctgctgccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70603 15 + 473220 --------ccctgctgctgcccg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728044 23 - 6934359 ggccctgcccctgcctctgccct i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I a score=679969.000000 s hg38.chr14_KI270725v1_random 27158 282 + 172810 GGCCCTGGCCTGGAACCTGGTCCTGTCAAGGACCTGCCCTGACTCTGCCATGGCCCTGGCCCTGCTCTGCCTTGTTCCTGGCCCTGACCCAGACCCAGACCCATTCCTGGCTCTGCACT------GGCCTTTCCCTGGCCCTGAGCTGGCAGTGGTCTGCCCCTGGTCTTGCCATCACCCTGCCCTGCTGTGCTCTGGATGTGTCATCACCCTGCCCTGC-----------CCCTACTCTGCCTTTGACCCTGCCCTGGCCTTACCTTGGCCCTCACCCTAGTCTTCGCTAGGCCCAGC s panTro5.chrY 285947 270 + 26350515 ggccctggcctggaacctggtcctgtcaaggacctgccctgactctgctatggccctggccctgctctgccttgttcctggccat------------gaccctttcctggctctgcact------ggcctttccctggccctgagctggcagtggtctgcccctggtcttgccatcaccctgccctgctgtgctctggatgcgtcatcaccctgccctgt-----------ctctactctgcctttgaccctgccctggccttaccttggccctcaccctagtcttcactaggccctgc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 27827 282 + 66344 AGCCCTGGCCTGGAACCTGGTCCTGTCAAGGACCTGCCCTGACTCAGCCATGGCACTGGCCCTGCTCTGCCTTGTTCCTGGCCCTGACCCAGACCCAGACCCTTTCCTGGCTCTGCACT------GGCCTTTCCCTGGCCCTGAGTTGGCAGTGGTCTGCCCCTGGTCTTGCCATCACCCTGCCCTGCTGTGCTCTGGATGTGTCATCACCCTGCCCTGG-----------CCCTACTCTGCCTTTGACCCTGTCCTGGCCTTACCTTGGCCCTCACCCTAGTCTTCATTAGGCCCTGC i panPan2.chrUn_NW_014019468v1 C 0 I 18 s gorGor5.CYUI01000689v1 3493 281 - 112215 ggccctggcctggaacctggtcctgtcaaggacctgccctgactctgccatggc-ctggccctgctctgccttgttcctggccctgacccagacccagaccctttcctggctctgcact------ggcctttccctggccctgagctggcagtggtctgcccctggtcttgccatcaccctgccctgctgtgctctggatgtgtcatcaccctgccctgg-----------ccctactctgcctttgaccctgccctggccttaccttggccctcaccctagtcttcgctaggcccagc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114472696 265 + 115148730 gtccctggcctggaacctggtcctgcgaaggacctgccctgactctgccatggccctggccctgctttgccttggtcctggcc------cagacccagaccctttcctgcctctg-----------------ccctggccctgagctggcagtggtctgcccctcatcttgccatcaccctgcccttctgtgctcttggtgtgtcatcactctgccctgg-----------ccctactctgcctttaaccctgccctggccttaccttggccctcaccctagccttcactaggccctgc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25178 254 - 38383 GGCCCTGGCCTGGAACGTGGTCCTGTCAAAGACTTGCCCTGACTCTGCCATGGCCCTGGTCCTGCTCTGCCTTGGTCCTGGCCCT------GACCCAGACCCTTTCCTGGCTGTACCCTGGCCATGGCCTTTCCCTAGCCCTGAGTTGGCAGTGGTCTGCCCCTGGTCTTGCCACCACCGTACCCTGCCATGCACTGGATGTGTCATCAGCCTGCCCTGG---------------------------------------CCCTACCTTGTCCCTCACCCTAGTCTTCGCTAGGCCCTGC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289504 292 - 75399963 ggccctggcctggaacctggctctgccagggacctaaccggactctgccatggccctggccctgctctgccttggtcctagccct------gacccagagcatttcctggctctgccctcaccctggcctttccctgg-cctgagctggcagtggtctgcccctggtcttggcaccaccctgccctgccatgcgctggctgtgtcatcaccctgccctggttctgccttctccctactctggctttgaccctgccctagccctaccttggccctcaccctagccttggctaggcactgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70618 292 + 473220 ggccctggcatggaacctgggcctgccgaggacctgcactgactctgccatggccctacccctgctctgccttggtcctggccct------gactcagagcatttcctgtctctgcccttgccccagccttcacgtgg-cctgaactggcagtggtctgcccctggtcttggcaccaccctgccctgccgtgctctggctgtgtcatcaccctgccctggttctgctttctccctgctctggctttcactctgccctaaccctactttggccctcaccctagccttggttaggccctgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728067 240 - 6934359 ggccctggc-------------ctgtcaaggacctgccccgactctgccatggccctggccctgctctgccttggtcctggccat------gacccagaccctttcctggctgtgccctggccatgggctttccctggccctgagttggcagtggtctgcccc-ggtcttgccaccaccctgccctgccgtgctctggatgtgtcatcagcctgccctgg---------------------------------------ccctaccttgtccctcaccctagtcttcgctaggacctgc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I a score=21122.000000 s hg38.chr14_KI270725v1_random 27440 28 + 172810 ACAGACCTGGCTCTGACCCTGGCCGAGC- s panTro5.chrY 286217 18 + 26350515 -----tctggagctggccct-----agc- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 3774 23 - 112215 acagacctggctctgaccct-----ggc- i gorGor5.CYUI01000689v1 C 0 I 1 s nomLeu3.chr7b 114472961 18 + 115148730 -----tcaggacctggccct-----aga- i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25432 19 - 38383 -----TCTGGAGCTGGCCCT-----AGCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289796 19 - 75399963 -----tctggacctgcccct-----agcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 70910 19 + 473220 -----tgtggacctggccct-----agct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728307 19 - 6934359 -----tctggacctggccct-----agcc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I e panPan2.chrUn_NW_014019468v1 28109 18 + 66344 I a score=57981.000000 s hg38.chr14_KI270725v1_random 27468 43 + 172810 ACAGACCTGGCTCTGACCCTGGCCCTGGTCTTTGTCCTGCCA-T s panTro5.chrY 286235 43 + 26350515 acagacctggccctgaacatggccctggactttgaactgcca-t i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28127 43 + 66344 ACAGACCTGGCCCTGATCCTGGCTCTGGTCTTTGTCCTGCCA-T i panPan2.chrUn_NW_014019468v1 I 18 C 0 s gorGor5.CYUI01000689v1 3798 19 - 112215 ------------------------ctggtctttgtcctgcca-t i gorGor5.CYUI01000689v1 I 1 C 0 s nomLeu3.chr7b 114472979 43 + 115148730 acagacctggccctgaccctggccctggtctttgtcctgcca-t i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25451 41 - 38383 -CAGACCTGGCCCTGACCCTGGCCCTGGCCTTTGTCCTTCAT-- i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289815 36 - 75399963 -cagacctggccctggctct------ggcttttgtcctgccac- i chlSab2.chr5 C 0 I 6 s manLeu1.NW_012099899v1 70929 35 + 473220 -cagacctgaccctggctct-------ccctttgtcctaccaa- i manLeu1.NW_012099899v1 C 0 I 6 s colAng1.NW_012115910v1 6728326 41 - 6934359 -cagacctggccctgaccctggccctggcctTTGTCCTTCAT-- i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16073 446 - 56717 I a score=102948.000000 s hg38.chr14_KI270725v1_random 27511 31 + 172810 AGCCTTGG-----------CCCTGAAGTGGACTTGGAGGTGT s panTro5.chrY 286278 31 + 26350515 agccctgg-----------ccctgaagtggacttggaggtgt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28170 31 + 66344 AGCCCTGG-----------CCCTGAAGTGGACTTGGAGGTGT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3817 31 - 112215 agccttgg-----------ccctgaagtggacttggaggtgt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473022 31 + 115148730 agccctgg-----------ccctgaagtggacgtggaggtgt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25492 31 - 38383 AGCCCTGG-----------CCCTGAAGTGGACTTGGAGGTGT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 16519 31 - 56717 tgccctga-----------ccctgAACAAGACTTGGAGGTTT i papAnu3.chrUn_NW_003942124v1 I 446 I 433 s chlSab2.chr5 43289857 42 - 75399963 ggccctggccctgccctcaccctgaactagacttggaggtgt i chlSab2.chr5 I 6 C 0 s manLeu1.NW_012099899v1 70970 31 + 473220 gtccctgg-----------tcctgaactagacttggaggtgt i manLeu1.NW_012099899v1 I 6 C 0 s colAng1.NW_012115910v1 6728367 31 - 6934359 AGCCCTGG-----------CCATGAAGTGGACTTGGAGGTGT i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I a score=95865.000000 s hg38.chr14_KI270725v1_random 27542 38 + 172810 CCTGGCCCCGGTGTAACATGGCTCTTCTTTGGCCTGTC s panTro5.chrY 286309 38 + 26350515 cctggccctggcgtaacatggctctgcattggcctgtc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28201 38 + 66344 CCTGGCCCTGGCATGACATGGCTCTGCATTGGCCTGTC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3848 38 - 112215 cctggccccggtgtaacatggctctgcattggtctgtc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473053 38 + 115148730 cctggccccagcgtcacatggctctgccttggcctgtc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25523 38 - 38383 CCTGGCCCTGGAGTGACCTGGCTCTGCCTTGGCCTGTC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289899 38 - 75399963 cctggccctgaggtgacctggccctgcctaggcctgtc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71001 38 + 473220 cctggccctgaagtgaccctggcctgcctaagcctgtc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728398 38 - 6934359 CCTGGCCCTGGAGTGACCTGGCTCTGccttggcctgtc i colAng1.NW_012115910v1 C 0 I 14 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16550 433 - 56717 I a score=-5615.000000 s hg38.chr14_KI270725v1_random 27580 3 + 172810 TCA------ s panTro5.chrY 286347 3 + 26350515 cct------ i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28239 3 + 66344 CCT------ i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3886 3 - 112215 tct------ i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473091 3 + 115148730 cct------ i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25561 3 - 38383 -CT-----T i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289937 8 - 75399963 -cctgcctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71039 3 + 473220 -cc-----t i manLeu1.NW_012099899v1 C 0 C 0 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16550 433 - 56717 I e colAng1.NW_012115910v1 6728436 14 - 6934359 I a score=650883.000000 s hg38.chr14_KI270725v1_random 27583 256 + 172810 GCCCTGCCCCTACCATCGCCTTGCCCTGCTCTGCCCTGCCCCAGTACTGACCCGGCCACGCTATTTCCCTGCCCTACCCTGCCTTGGCTGTGCCCTGGCTCGGTTCTGGCCCTGGCCCCGGCCCTGCCCTGGACATGCTCTGACACTGCCTCAGCCTTGGCACTAGCCTGGCTCTTTCTTGGCATCAGCCCTGCTCTCTCTGTGGACTGGCTCTTGTCCTTTCCTGCCCTGGCCATACCATGCCCTGCCCTGCCCT s panTro5.chrY 286350 256 + 26350515 gccctgcccctaccatcgccttgccctgctctgccctgtcccagtactgacccagccatgctatttccctgccctaccctgccttggctgtgccctggctcggttctggccctggccccgacaattccccggacatgctctgacactgcctcagccttgttactagcttggctctttcttgtcatcagccctgatctctctgtggactggctcttgttctgtcctgcactggccataccatgccctgccctgctct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28242 256 + 66344 GCCCTGCCACTACCATTGCCTTTCCCTGCTCTGCCCTGTCCCAGTACTGACCCAGCCATGCTATTTCCCTGCCATACCCTGCCTTGGCTGTGCCCTGGCTCGGTTCTGGCCCTGGCCCCGGCCCTGCCCTGGACATGCTCTGACACTGCCTCAGCCTTGGCACTAGCCTGGCTCTTTCTTGGCATCAGCCCTGCTCTCTCTGTGGACTGGCTCTTGTCCTGTCCTGCACTGGACATACCATGCCCTGCCCTGCCCT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 3889 254 - 112215 gccctgcccctaccatcgccttgccctgctctgccctgtcccagtactgacccggccacgctatttccctgccctaccctgccttggctgtgccctggctcggttctggccctggccccggccctgccctggacatgctctgacactgcctcagccttggcactagcctggctctttcttggcatcagccctgctctctctgtggaccggctcttgtcctgtcctgcactggccataccatgcctg--cctgccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473094 245 + 115148730 gccctgcccctaccatcacattgccctgctctgccctgt-----------cctggccatgccatttccctgctgtaccctgccttgtctgtgccttggctcagttctggccctcgccccggccctgccctggacatgctctgacactgcctcagccttggccctagcctggctctttcttggcatcagccctgctctctctgtggaccggctcttgtcctgtcctgcactggccataccatgccctgccctgccct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25564 246 - 38383 GCCCTGCCCCTACCATCACCTTGCCCTGTTGTGCCCTGTCCTAGTACTGACCCGGCTGTGGCATTGCCCTGCCCTACCCTGCCTTGGCTGTGCCCTGGCTCGATTCCGGCCCTGGCCCCG------CCCTGTGCATGCCATGACACTACCTCAGCCTCGGCACTAGGCTGGTCCTTTCCTGGCATCAGCCGTGCTCTTTCTATGGACCGCCTTTTGTCGTGTCCTGCGCTGGCCATTCCATGCCCTGCCCTG---- i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43289945 246 - 75399963 gccccgcccccgtcatcgccttgccctgttctgccctgtcctggcactgacctggacataccattgccctgccctaccctgccttggccatgccctgactcggttctggccctggccccg------ccctggacatgccctgacactgcctcagccttggcactagcctggctcggccttggcattggccctgccctctctgtggactgggtttggttgtgtcctgcactggccataccatgccttgccctg---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71042 246 + 473220 gccctgcccctgccatcgccttgccctgttctgccttgtcccagcacggacctggccatgccattgtcctgccctaccctgccttggccatgccctggcttggttctggccctggcccca------ccctggacataccctgatactgcctcagcctttgcactattgtggctctgccttggcattggccctgctctctctgtggtctggctctagtcctgtcctgtactggccatactatgccctgccctg---- i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728450 243 - 6934359 gccctgCCCCTCCCATCACCTTGCCGTGTTCTGCCCTGTCCTAGTACTGACCCGGCTATGGCATTGCCCTGCCCTACCCTTCCTTGGCTGTGCCCTGGCTCGATTCTGGCCCTGGCCCCG------CCCTGTACATGCCATGACACTACCTGAGACTTGGCACTAGCATGGCTGTTTCCTGGCATCAGCCCTGCTCTCACTATGGACCGCCTCTTG---TGTCCTGCGCTGGCCATTCCATGccctgccctg---- i colAng1.NW_012115910v1 I 14 C 0 e ponAbe2.chr2a_random 8997815 677 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16550 433 - 56717 I a score=21108.000000 s hg38.chr14_KI270725v1_random 27839 11 + 172810 gccctgactca s panTro5.chrY 286606 11 + 26350515 gccctgactca i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28498 11 + 66344 GCCCTGACTCA i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4143 11 - 112215 gccctgactca i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8998492 11 + 13868332 ggcctgactca i ponAbe2.chr2a_random I 677 I 506 s nomLeu3.chr7b 114473339 11 + 115148730 accctgactca i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25810 4 - 38383 -------CCCT i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290191 5 - 75399963 ------actca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71288 5 + 473220 ------actca i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728693 10 - 6934359 -ccctgactca i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16550 433 - 56717 I a score=257991.000000 s hg38.chr14_KI270725v1_random 27850 100 + 172810 gccctgact-----------cagccTTGGCCTTGGCATTGCCCCTGGTCCTGCCATATTTCTTGCCCTGTCCCTACCCTAGCCTTGGCCCTGACCCTTACCTTGCTGTGGC s panTro5.chrY 286617 111 + 26350515 gccctggctcatccctggcccagccttggccttagcattgcccctggtcatgccatatttcttgccctgtccctaccctggccttggccctgacccttaccttgctctggc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28509 110 + 66344 GCCCTGGCTCAGCCCTCGC-CAGCCTTGGCCTTGGCATTGCCCCTAGTCCTGCCATATTTCTTGCCCTGTCAGTACGCTGGCCTTGGCCCTGACCCTTACCTTGCTCTGGC i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4154 100 - 112215 gccctgact-----------cagccttggccttggcattgcccctggtcctgccatatttcttgccctgtccctaccctagccttggccctgacccttaccttgctctggc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473350 100 + 115148730 gtcctggcc-----------tagccctgaccttggcattgcccctggtcctgccatatttcttgccctgtccctaccctggccttggccctgaccctttccttgctctggc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25814 100 - 38383 GCCCTGACT-----------CAGCCCTGGCCTTGGCATTGCCCTTGGTCCTGCCGTATTTCTTGCCCTGTCCCTATCCTGGCCTTGGCCCTGACCCTTACCTTGCTCTGGC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290196 94 - 75399963 gtcatggct-----------cagccctggacttggcgttgcccttggtcctgccatatttccggccctgtccctaccctggtcctggc------tgtttccctgctctgtc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71293 89 + 473220 gccatggct-----------cagccctggctttggcgttgccgctggtcctgccatatttctggccctgtccctaccttggccttgga-----------cctggcccttac i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728703 100 - 6934359 gccctggcc-----------cagccctggccttggcattgcccctggtcctgccatatttcttgccctgtccctaccctggccttggccctgacccttaccttgctctggc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 11977 861 - 120202 I e papAnu3.chrUn_NW_003942124v1 16550 433 - 56717 I a score=66344.000000 s hg38.chr14_KI270725v1_random 27950 21 + 172810 CCTGCCCTTGCCCTAACGCAG s panTro5.chrY 286728 21 + 26350515 cctgcccttgccctaacgcag i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28619 21 + 66344 CCTGCCCTTGCCCTAACACAG i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4254 21 - 112215 cctgcccttgccctaatgcag i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473450 21 + 115148730 catgcccttgccctaacccag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25914 21 - 38383 CCTGCCCTTGCCCTTACGCAG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290290 21 - 75399963 cctgccctggccctaacgcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71382 21 + 473220 cctgccctggccctaacgaag i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728803 21 - 6934359 cctgcccttgcccttacacag i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 12838 20 - 120202 CCTGCTCTGGCCC-TAAGCAG i rhiBie1.NW_016807452v1 I 861 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e papAnu3.chrUn_NW_003942124v1 16550 433 - 56717 I a score=85750.000000 s hg38.chr14_KI270725v1_random 27971 22 + 172810 CCCCTGGTCC-TGTCATGGC-CCT s panTro5.chrY 286749 22 + 26350515 cccctggccc-tgtcatggc-cct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28640 22 + 66344 CCcctggccc-tgtcatggc-cct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4275 21 - 112215 cccctgg-cc-tgtcatggc-cct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473471 22 + 115148730 ctgctggccc-tgtcatggc-cct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25935 22 - 38383 Cccctggccc-tgtcatgga-cct i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 16983 22 - 56717 cccctggtcc-tatcatggc-cct i papAnu3.chrUn_NW_003942124v1 I 433 I 85 s chlSab2.chr5 43290311 22 - 75399963 cccctggtcc-tgtcatggc-cct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71403 22 + 473220 cccttggccc-tgtcatggc-cct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728824 22 - 6934359 ctcctggccc-tgtcatgga-cct i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 12858 24 - 120202 CCCCTGGATCGTGTCATGGGCCCT i rhiBie1.NW_016807452v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I a score=47696.000000 s hg38.chr14_KI270725v1_random 27993 15 + 172810 GCCCTGGACCTGTCC s panTro5.chrY 286771 15 + 26350515 gccctggacctgtcc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28662 15 + 66344 gccctggacctgtcc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 4296 15 - 112215 gccctggacctgtcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473493 8 + 115148730 g-------cctgtcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25957 15 - 38383 gccctggacctgtcc i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290333 15 - 75399963 gacctggacctgtcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71425 15 + 473220 gccctggccttctcc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728846 15 - 6934359 gccctggacctgtcc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 12882 15 - 120202 GCCCTGGACCTGTCC i rhiBie1.NW_016807452v1 C 0 I 75 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17005 85 - 56717 I a score=24552.000000 s hg38.chr14_KI270725v1_random 28008 7 + 172810 TGGCCCT s panTro5.chrY 286786 7 + 26350515 tggccct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 28677 7 + 66344 tggccct i panPan2.chrUn_NW_014019468v1 C 0 M 531 s gorGor5.CYUI01000689v1 4311 7 - 112215 tggccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473501 7 + 115148730 tggccct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25972 7 - 38383 tggccct i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290348 7 - 75399963 tggccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71440 7 + 473220 tggccct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728861 7 - 6934359 tggccct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 12897 75 - 120202 I e papAnu3.chrUn_NW_003942124v1 17005 85 - 56717 I a score=92610.000000 s hg38.chr14_KI270725v1_random 28015 42 + 172810 GGTCCTTCCCTGCTTGAGACCTTGCCCTGG-TTCTCCCCTGGC s panTro5.chrY 286793 42 + 26350515 ggcccttccctgcttgagaccttgccctgg-ttctctcctggc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4318 41 - 112215 ggcccttccctgcttgagaccttgccctgg-ttctc-cctggc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473508 42 + 115148730 ggcccttccctgcttgagaccttgtcctgg-ttctcccctggc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 25979 42 - 38383 ggccctgccctgcTTCAGACCTTGCCCTGG-TTCTCCCCTGGC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290355 42 - 75399963 ggcccttccctgcttgagaccttaccctgg-ttctgccctggc i chlSab2.chr5 C 0 I 6 s manLeu1.NW_012099899v1 71447 42 + 473220 ggcccttccctgcttgagatcttaccctgg-ttctgccctggc i manLeu1.NW_012099899v1 C 0 I 11 s colAng1.NW_012115910v1 6728868 43 - 6934359 ggcccttccctgcttcagaccttcccctggtttcacccctggc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 12897 75 - 120202 I e papAnu3.chrUn_NW_003942124v1 17005 85 - 56717 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=30379.000000 s hg38.chr14_KI270725v1_random 28057 15 + 172810 CCTGACCCTGAAATG s panTro5.chrY 286835 15 + 26350515 cctgaccctgaaata i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4359 15 - 112215 cctgaccctgaaatg i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 26021 15 - 38383 CCTGATGGTGAAATG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290403 15 - 75399963 cctgacactgaaatg i chlSab2.chr5 I 6 C 0 s manLeu1.NW_012099899v1 71500 15 + 473220 cctgacactgaaatg i manLeu1.NW_012099899v1 I 11 C 0 s colAng1.NW_012115910v1 6728911 15 - 6934359 cctgcccgtgaaatg i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 12972 15 - 120202 CCTGACACTGAAATG i rhiBie1.NW_016807452v1 I 75 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17005 85 - 56717 I e nomLeu3.chr7b 114473550 0 + 115148730 C e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=4500.000000 s hg38.chr14_KI270725v1_random 28072 1 + 172810 C s panTro5.chrY 286850 1 + 26350515 c i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4374 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473550 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26036 1 - 38383 C i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17090 1 - 56717 c i papAnu3.chrUn_NW_003942124v1 I 85 I 579 s chlSab2.chr5 43290418 1 - 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71515 1 + 473220 c i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728926 1 - 6934359 c i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 12987 1 - 120202 C i rhiBie1.NW_016807452v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=32322.000000 s hg38.chr14_KI270725v1_random 28073 10 + 172810 CTGGCCCTAC s panTro5.chrY 286851 10 + 26350515 ctggccctac i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4375 10 - 112215 ctggccctag i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473551 10 + 115148730 ctggccctac i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26037 10 - 38383 CTGGCCCTAC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290419 10 - 75399963 ctggccctac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71516 10 + 473220 ctggccctat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728927 10 - 6934359 ctggccctac i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 12988 10 - 120202 CTGGCCCTAC i rhiBie1.NW_016807452v1 C 0 I 108 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=215830.000000 s hg38.chr14_KI270725v1_random 28083 97 + 172810 CCTGGCCTTGCACTGCTCTGGCCCTTGCCCTGACTCTGGTCCTGTCACTGACCTAGCCCCAGCCCTGTTGCTGGTCTTACCATGGCCCAGACCCTGC s panTro5.chrY 286861 97 + 26350515 cctggccttgcactgctctggcccttgccctgactctggtcctctcactggtctagccccagccctgttgctggtcttaccatggccatgaccctgc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4385 97 - 112215 cctggccttgcactgctctggcccttgccctgactctggtcctgtcactgacctagccccagccctgttgctggtcttaccatagcccagaccctgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473561 97 + 115148730 cctgaccttgcactgctctggcccttgccctgactatggtcctgtcactggcctagccccagccctgttgctggtctgaccatggcccagaccctgc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26047 97 - 38383 CCTGGCCTTGCACTGCCCTGGCCCTTGCCCTGACTCTGGTCCTGTCCCTGGAAAAGCCCCAGCCCCGTTGCTCGTCTTACCATGGCCCAGACCCTGC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290429 97 - 75399963 cctcaccttgcactgctctgatccttgccctgactctggccctatcactgtcctagccccagccctgtcactggtcttaccacagcccagagcctgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71526 97 + 473220 cctggccttgcactgctctggcccttgccctgactctggccctgtcactgtcctagccccagcccggtcacaagtcttaccatggctcagaccctgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6728937 97 - 6934359 cctggccttgcactgctctggcccttgccctgactctggtcccgtcactggaaaagccccagccctgttgctcgtcttaccatgggccggaccctgc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 12998 108 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=183984.000000 s hg38.chr14_KI270725v1_random 28180 64 + 172810 CTTGGCCCTGCCCTGACACTGTCCTGGACC-CTGGCTGTGCCAAGAACCTGTACTGTCCTTGCCC s panTro5.chrY 286958 64 + 26350515 cttggccctgccctgacactgtcctggagc-ctggctgtgccaagatcctgcactgtccttgccc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4482 64 - 112215 cttggccctgccctgacactgtcctggacc-ctggctgtgccaagaacctgcactgtccttgccc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473658 64 + 115148730 cttggtcctgccctgacactgtcctggtcc-ctggctgtgtcaagaacctgcactgtccttgccc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26144 64 - 38383 CTTGGCCCTGCCCTGACACTGTCCTGGACC-CTTGCTGTGCCAAGAACCTGCACTGTTGTTGCCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290526 64 - 75399963 cttggccctgccctgatcctgtcctggtct-ctggctgtgccaagaaactgcactgtccttgccc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71623 64 + 473220 cttggccctgccctgaccctgtactagacc-ctggctgtgtcaagaacttgcactgtcattgccc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6729034 64 - 6934359 cttgtccctgccctgacactgtcctggacc-ctggctgtgccaagaacctgcactgttgttgccc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 13106 65 - 120202 CTTGGCCCTGCCCTGATCCTGTCCTGGTCCTCTGGCTGTGCCAAGGACGTGCACTGTCCTTGCCC i rhiBie1.NW_016807452v1 I 108 I 99 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=91438.000000 s hg38.chr14_KI270725v1_random 28244 43 + 172810 TTGTTGTGCTCCTGCCCCGAACCTGGTCCTTCCCAggccatgg s panTro5.chrY 287022 43 + 26350515 ttgttttgctccagccccaaacctggtcctgcccaggccctgg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4546 43 - 112215 ttgttttgctcctgccccaaacctggtcctgcccaggccgttt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473722 43 + 115148730 ttgttttgcccctgccctgaacctgatcctgcccaggtcatgg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26208 43 - 38383 TTGTTTTGCTCCTGTCCCCAACCTCGTCCTGCCCAGGCCATGG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290590 43 - 75399963 ttgtttttctcctgccctgaacctggtcctacccaggccatgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 71687 43 + 473220 ttgttttgctcctaccctgaacctggtcctgcccaagccatgg i manLeu1.NW_012099899v1 C 0 I 312 s colAng1.NW_012115910v1 6729098 43 - 6934359 ttgttttgctcctgtcccgaacctggtcctgcccaggccgtgg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=3414.000000 s hg38.chr14_KI270725v1_random 28287 2 + 172810 cc s panTro5.chrY 287065 2 + 26350515 cc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4589 2 - 112215 ct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473765 2 + 115148730 cc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26251 2 - 38383 CC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43290633 2 - 75399963 cc i chlSab2.chr5 C 0 I 3383 s colAng1.NW_012115910v1 6729141 2 - 6934359 cc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=11600.000000 s hg38.chr14_KI270725v1_random 28289 12 + 172810 gtggccctgg-----cc s panTro5.chrY 287067 17 + 26350515 ctggccctggctcttcc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4591 12 - 112215 atggccctgg-----cc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473767 12 + 115148730 atggccctgg-----cc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26253 12 - 38383 ATGGCCCTGT-----CC i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729143 12 - 6934359 atggccctgt-----cc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8998503 506 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=10910.000000 s hg38.chr14_KI270725v1_random 28301 8 + 172810 ----------------ctggccct s panTro5.chrY 287084 8 + 26350515 ----------------ctggccct i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4603 8 - 112215 ----------------ctggccct i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 8999009 8 + 13868332 ----------------ctggccct i ponAbe2.chr2a_random I 506 I 1090 s nomLeu3.chr7b 114473779 8 + 115148730 ----------------ctggccct i nomLeu3.chr7b C 0 I 22 s cerAty1.NW_012006010v1 26265 24 - 38383 CTGCCCTGGCTATTCCCTCGCCCT i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729155 24 - 6934359 ctgccctggctgttccctggcctt i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=465573.000000 s hg38.chr14_KI270725v1_random 28309 440 + 172810 gcccaggtcttggcactggcctggccctgccctgccctggccctATGCTTTCCTGGC--------------------CCTGCCTTGGCCCTAGCCTGGCTTTGACCCTGCCCTGGCCCTACCTTGGCCTTCACCCTAGCCTTACCTGGGCACTGTGTTTGACCTGGCTATAGCACAGACCTGGTTGTGGCCCTGGCCCTGCCGTGGCCCTGTCCCAGACCCTAGCCCTGCCAGGTACCTGTCCTGGCCCAGCTCTGGGCCTGGCTTTGTCCCTGGTTCTTAGATGACCCTGGCCCTGCCCCTGCCCTTGCCCTTG------CCATGGCACTGGCCTTGGACATGTCCGTGGTCCTAACCCTGGCCCTGCCCTGGAGCTGCCACTGTCTTGGCCCTGCCCTGGCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCCGGCCCCAGCCATAGACCTGCCCTGGTTGGTCG s panTro5.chrY 287092 460 + 26350515 gcccaggtcttggcactggcctggcccttccctgccttggccctatgctttcctggccctgccttgccggcccttgtcctgccttggccctagcctgtctttgaccctgccctggccctaccttagccttcaccctagccttacctgggcactgtgttggacctggccatagcacagacctggttgtggccctggcccagccatggccctgtcccagaccctagccctgccaggtacctgtcctcgccctgctctgggcctggctttgtccctggttcttagatgaccctggccctggccctgcccttgtccttg------ccctggcactggccttggacatgtctgtggtcctaaccctggctctgccctggagctgccactgtctttgccctgccgtggcttgggccctgctctggcccttgccctgccctggccccaaccataggcctgcccttgttggtca i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 4611 456 - 112215 gcccaggtcttggcactggcctggccctgccctgccctggccctatgctttcctggccctgccttgcc-gccctggccctgccttggccctagcctggctttgaccctgccctggccctaccttggccttcaccctagccttacctgggcactgtgttggacctggccatagcacagacctggttgtggccctggccctgccgtggctctggcccagaccctagccctgccaggtacctgtcctggcccagctctgggcctggctttgtccctaattcttagatgaccctggccctgcccctgcccttgcccttg------ccctggcactggccttggacatgtctgtggtcctaaccctggccctgccctggagctgccactgtcttggccctgccctggctctggccctgcccc-gccctgg-cctgccccgg-cccagccatagacctgccctggttggtcg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114473809 404 + 115148730 gcccaggtcttggcactggcctggccctgccctggcttggtcctatgctttcctcaccctgccttgcccgccatggccctgccttggccctagcctggctttgaccctgccctggccccattttggccttcactctagcctcacctgggcactgtgttggacctggccatagcacagacctggttgtggccctggccctg---------------------------------------------gccctgctctggacctggctttgtccctggttcttagatgaccctggccctgcccctgcccctgcccctgcccttaccctggcactggccttggacatgtccgtggt-----------------cctggagctgccactgtcttggccctgccctggctctggccctgccccggccctggccctgccccggccccagccatagacctgccctggtaggtcg i nomLeu3.chr7b I 22 C 0 s cerAty1.NW_012006010v1 26289 437 - 38383 GCTCAGGTCTTGGCACTCTCCTGGCCCTGCCCTGCCTTCGCCCTGTGCTTTCCTGGCCCTGCCTTGCCTGCCCTGGTCCTGCCTTGGCCCTACTCTAGCTTTGATCCTTCCCTGGCCCTACCTTGGCCTTCACCCTAGCCTTGTCTGGGCACTGTGCTGGACCTGGCCATAGCACAGACCTGGTTGTGGCCCTGGCCCTGCCATGGCCCTGTCCCAGACCCTAGCCCTGCCAGGTACCTGTCCTGGCCCTGCTCTGGGCCTGGCTTTGTCCTTGGTTCTTAGATGACCCTGGCCCTGCCCCTGCCCTTG------------CCCTGGCACTGACCTTGGACATGTCCGTGGTCCTAACCCTGGCCCTGCCCTGGAGCTGTCACTGTcttggccctgccttg-----------------gccctggccctggccctgccACAGCCAAAGACCTGCCCTGGTTGGTCA i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729179 392 - 6934359 gctcaggtcttgaccctggcctggccctgtcttgccttggccctatgctttcctggccctgccttgcctg---------------------------------------cccttgccctgccttggccttcaccctagtcttgcctggacactgtgctggacctggtcatagcacagacctggttgtggccctggccctgccatggccctgtcccagaccctagccctgccaggtacctgtcctgaccctgctctgggcctgactttgtccctggttcttagatgaccctggtcctgcccctgcccttg------------ccctggcactggccttggacatctctgtggtcctaaccccggctctgccttggagctgtcagtgtcttgaccctgcct-----------------------tggccctggccctgccacagccacagacctgccctggttggtca i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=1179.000000 s hg38.chr14_KI270725v1_random 28749 1 + 172810 T s panTro5.chrY 287552 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 5067 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474213 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26726 1 - 38383 T i cerAty1.NW_012006010v1 C 0 C 0 s nasLar1.chrUn_JMHX01002093v1 57 1 - 3245 c i nasLar1.chrUn_JMHX01002093v1 N 0 N 0 s colAng1.NW_012115910v1 6729571 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=352275.000000 s hg38.chr14_KI270725v1_random 28750 290 + 172810 TCCCTACCTTAACCCTGTGCTACCCTGGGCCTGCTCCACCCTGCCCTGGCCCTGCCCTCCCTTTGGGCCTGCTCTGACCCCGCCTTGGCCCTCACACTGGCCCTAGCACAGACCTGGTCCTATCTGTGGCCTTGCTCTGGCATTGACCCCTGTTCCTGACCCTGGTCCTGCCATGGCCCTGGCCCTGCCAATGAC--------------------------------CCTGGCCCTGAACTGGCCCTGCCCTGA-CCTGGCCCTGAAGTGGATTTGCAGGTGTCTTGTCCATGATTTAA---------------------------CCTGGTCTTACCATGGCCCTGTCC s panTro5.chrY 287553 322 + 26350515 gccctaccttaaccctgtgctacccagggcctgctccaccctgccctttccctgccctccctttggccctgccctgaccccaccttggccctcacactggcactagcccagacctggtcctatctgtggcattggcctggcattgacccctgctcctgaccctggtcctgccatgaccct-gccctgccaatgaccctgggagccctgaccctggccctgtcttggtcctggccctgaactggccctgccctgaccctggccctgaagtggatttgcaggtgtcttgtccctgatttaa---------------------------cctggccccaccatggccctgtcc i panTro5.chrY C 0 I 73 s gorGor5.CYUI01000689v1 5068 323 - 112215 gccctaccttaaccctgtgctaccctgggcctgctccaccctgccctggccctgccctccctttggccctgccctgaccccaccttggccctcacactggccctagcacagacctggtcctatctgtggccttggcctggcattgacccctgctcctgaccctggtcctgccatgtccctggccctgccaatgaccctggcagcccttaccctggccctgtcttggccctggccctgaactggccctgccctgaccctggccctgaagtggatttgcaggtgtcttgtccatggtttaa---------------------------cctggtcttaccatggccctgtcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474214 321 + 115148730 gccctgcgttaaccctgtgctaccctgggcctgctccaccctgccctggccctgccctccctttggccctgccctgaccctgccttggccctcacactggccgtagcacagacctggtcccatctgtggc-ttggcccggcattgacccctgctcctgaccctggtcccgccatggccctggccctgccaatgatcctgacagccctggccctggccctgtcttggccctggccatgaactggccctgccctgaccctagccctgaagtggatttgcaggtgtcttgtccctgatttaa---------------------------cctgcccctaccatgg-cttgtcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 26727 350 - 38383 GCCCTGCCTTAACCCAGTGCTACCGTGGGCCTGCTCCACCCTGCCCTGGCTCTGCCCTGCCTTTGGCTCTGCCCTGACCCTGCCTTGGCCCTCACACTGGCCCTAGTGCAAACCTTGTCCTTGCTCTGGCCTTGGCCCGGCATTGACCACTGCTCCTGACCCTGGTCGTGCCATGGCCCTGACCCTGCCAATGATCCTGACAGTCGtggccctggccctgtcttggccctgtcctggccctggccctggccttaccctggccctgAAGTGGATTTGAAGGTATCCTGTCCCTGGTTTAATCTTGCTCTGCCTTCGCCCGTCCCTCTCCTGGCCCTACCATGGCCCTGCCC i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729572 350 - 6934359 gccctgccttaacccagtgctaccctgggcctgctccaccctgccctggctccgccctgcctttggccctgccctgaccccgccttggccctcacactggccctagtgcaaacctggtccttgctctggccttggcccggcattgaccactactcttgaccctggtcgtgccatggccctggccctgccaatgatcctgacagtcctggccctggccctgtcttggccctgtcctgaccctgggcctgccctgaccctggccctgaAGTGTATTTGAAGGTATCTTGTCCCTGATTTAATCTGGTTCTACCTTGCCCCGTCCCTCTCCTGCCCCTACCATGGCCGTGCCC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=107345.000000 s hg38.chr14_KI270725v1_random 29040 137 + 172810 CTCCCCTGGCTCTGTCCTGGTCTTGTGCTGACCCTGACCCAGACCTTGGCCCTGCCCCAGCCTTGTCCTTGACCTGGCCATGCCCCTGCCTCTGCCCTGGACCGGCACTGGCACTGGCATGGACCCTGGCCCTGGCC s gorGor5.CYUI01000689v1 5391 136 - 112215 ctcccctggctctgtcctggtcttgtgctgaccctgacccagaccttggccctgccccagccttgtcctagacctggccatggccctgc-tctgccctggaccggcgctggcactggcatggaccctggccctggcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474535 137 + 115148730 ctcccctggctctgtcctggtcttgtgctgaccatgactcagaccttggccctgccccagccttgtcctagacctggccatggccctgcccctgccctggaccagcactggcactggcatggaccctggccctggcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27077 137 - 38383 CTTCCCTGGCTCTGCCCTGGTCTTGTTCTTACCCTGACCGAGACCTTGGCCCTGCCCCAGCCTTGTCCCAGACCTGGCTATGGCCCTGCCCCTGCCCTGGGCCGGCGCTGGCACTGGCATGGACCCTGGACCTGGCT i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6729922 127 - 6934359 CTTCCCTG----------GGTCTTTTGCTTACCCTGACTGAGACCTTGGGCCTGCCCCAGCCTTGTCCTAGAcctggccatggccctgcccctgccctggattggccctggcactggcatggaccctggacctggct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13171 99 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M e panTro5.chrY 287875 73 + 26350515 I a score=38702.000000 s hg38.chr14_KI270725v1_random 29177 38 + 172810 CTTCACTACTTAAGGCCATACCCTGGCC-CAGCCCTGGT s gorGor5.CYUI01000689v1 5527 38 - 112215 ctttgctacttaaggccataccctggcc-cagccctggt i gorGor5.CYUI01000689v1 C 0 I 75 s nomLeu3.chr7b 114474672 38 + 115148730 cttcacaactgaaggccataccctggcc-cagccctggt i nomLeu3.chr7b C 0 I 69 s cerAty1.NW_012006010v1 27214 38 - 38383 GTTGGCTACTTAAGGCCATACCCTGGCC-CAGCCCTCCT i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6730049 38 - 6934359 cttggctacttaaggccataccctggcc-cagccctcct i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 13270 39 - 120202 CTTCACTGCTTAAGGCCATATCCTGGCCGCGGTCCTAGG i rhiBie1.NW_016807452v1 I 99 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M e panTro5.chrY 287875 73 + 26350515 I a score=36003.000000 s hg38.chr14_KI270725v1_random 29215 21 + 172810 CCTGACCCTGTCCTGGCCCTA s panTro5.chrY 287948 21 + 26350515 cctgtccctgtcctggcccta i panTro5.chrY I 73 C 0 s gorGor5.CYUI01000689v1 5640 21 - 112215 cctgtccctgtcctggtccta i gorGor5.CYUI01000689v1 I 75 C 0 s nomLeu3.chr7b 114474779 21 + 115148730 tctgtccctttcctggcccta i nomLeu3.chr7b I 69 C 0 s cerAty1.NW_012006010v1 27252 21 - 38383 CGTGACCCTGTCCTGGCCCTA i cerAty1.NW_012006010v1 C 0 I 78 s colAng1.NW_012115910v1 6730087 21 - 6934359 cctgaccctgtcctggcccta i colAng1.NW_012115910v1 C 0 I 34 s rhiBie1.NW_016807452v1 13309 21 - 120202 CCTGACCCTGTCCTGGCCCTA i rhiBie1.NW_016807452v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=6850.000000 s hg38.chr14_KI270725v1_random 29236 5 + 172810 GCCCC s panTro5.chrY 287969 5 + 26350515 gcccc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 5661 5 - 112215 gcccc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474800 5 + 115148730 gcccc i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6730142 5 - 6934359 gcccc i colAng1.NW_012115910v1 I 34 I 35 s rhiBie1.NW_016807452v1 13330 4 - 120202 -CCCC i rhiBie1.NW_016807452v1 C 0 I 140 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e cerAty1.NW_012006010v1 27273 78 - 38383 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=10755.000000 s hg38.chr14_KI270725v1_random 29241 12 + 172810 GTTGCTGGTCCT s panTro5.chrY 287974 12 + 26350515 attgctggtcct i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 5666 12 - 112215 gttgctggtcct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474805 12 + 115148730 attgctggtcct i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6730182 12 - 6934359 gttgctggtcct i colAng1.NW_012115910v1 I 35 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13334 140 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e cerAty1.NW_012006010v1 27273 78 - 38383 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=21572.000000 s hg38.chr14_KI270725v1_random 29253 20 + 172810 GCCATGGCCCTTGTCCTGAC s panTro5.chrY 287986 20 + 26350515 gccatggctcttatcctgac i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 5678 20 - 112215 gccatggcccttgtcctgac i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474817 20 + 115148730 gccgtggcccttgtcctgat i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27351 20 - 38383 GCCATGGCCGTGTTCCTGAC i cerAty1.NW_012006010v1 I 78 C 0 s colAng1.NW_012115910v1 6730194 20 - 6934359 gccatggccgtgttcctgac i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13334 140 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 28684 531 + 66344 M a score=32456.000000 s hg38.chr14_KI270725v1_random 29273 19 + 172810 ATTGCCCTTTCCTGGTTCT s panTro5.chrY 288006 19 + 26350515 attgccctttcctggtcct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29215 16 + 66344 ATTGCCCTTTcctggt--- i panPan2.chrUn_NW_014019468v1 M 531 C 0 s gorGor5.CYUI01000689v1 5698 19 - 112215 attgccctttcctggttct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474837 19 + 115148730 attgccctttcctggtcct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27371 19 - 38383 ATTGCCCTTTcctggtcct i cerAty1.NW_012006010v1 C 0 C 0 s colAng1.NW_012115910v1 6730214 19 - 6934359 attgccctttcctggtcct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13334 140 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e manLeu1.NW_012099899v1 71730 312 + 473220 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=2100.000000 s hg38.chr14_KI270725v1_random 29292 1 + 172810 G s panTro5.chrY 288025 1 + 26350515 g i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 5717 1 - 112215 g i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474856 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27390 1 - 38383 g i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72042 1 + 473220 g i manLeu1.NW_012099899v1 I 312 C 0 s colAng1.NW_012115910v1 6730233 1 - 6934359 g i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13334 140 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e chlSab2.chr5 43290635 3383 - 75399963 I e panPan2.chrUn_NW_014019468v1 29231 0 + 66344 C a score=181015.000000 s hg38.chr14_KI270725v1_random 29293 65 + 172810 GCCCTGGCCCT-GTCCCAGCCCTGCTCTGGCCCTGGTCTGAACCCTGGCCCTGCAATAGACCTGCC s panTro5.chrY 288026 64 + 26350515 gccctggccct-gtcccagccctgctctggccc-aatctgaactctggccctgcaatggatcctcc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29231 64 + 66344 -ccctggccct-atcccagccctgctctggccctggtctgaaccctggccctgcaatggacctgcc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5718 65 - 112215 gccctggccct-gtcccagccctgctctggccctggtctgaaccctggccctgcaatagacctgcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474857 65 + 115148730 gccctggccct-gccccggcccttctctggccctggtctgaaccctggccctgcaatggacctgcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27391 66 - 38383 gccctggccctggccctggccctgccccggccctggTCTGAACTCCGGCCCTGCAATGGACCTGCC i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72043 65 + 473220 gccctggccct-gcgccagccctaatctggccctaatctgaatcctggccctgcaatggacctgct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730234 65 - 6934359 gccctgggcct-gccctggccctgctctggccctggtctgaaccccggccctgcagtggacctgcc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 13474 65 - 120202 GCCCCGGTCCT-GCCCCGGCCCTGCTCTGGCCCTGGTCTGAATCCTAGCCCTGCAATGGACTTGCC i rhiBie1.NW_016807452v1 I 140 I 858 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=25479.000000 s hg38.chr14_KI270725v1_random 29358 11 + 172810 TTGGTCCTGCC s panTro5.chrY 288090 11 + 26350515 ttggtcctgcc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29295 11 + 66344 ttggtcctgcc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5783 11 - 112215 ttggtcctgcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474922 11 + 115148730 ttggccctgcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27457 11 - 38383 TTGGCCCTGCC i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72108 11 + 473220 ttatccctgcc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730299 11 - 6934359 ttggccctgcc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e papAnu3.chrUn_NW_003942124v1 17091 579 - 56717 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=32653.000000 s hg38.chr14_KI270725v1_random 29369 12 + 172810 CACACCCTGGCT s panTro5.chrY 288101 12 + 26350515 cagaccctggtt i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29306 12 + 66344 cagaccctggct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5794 12 - 112215 cagaccctggct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474933 12 + 115148730 cagaccctggct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27468 12 - 38383 TAGACCCTGCCT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17670 12 - 56717 CAGACCATGGCT i papAnu3.chrUn_NW_003942124v1 I 579 I 50 s manLeu1.NW_012099899v1 72119 12 + 473220 cagaccctggct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730310 12 - 6934359 tagatcctggct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=105412.000000 s hg38.chr14_KI270725v1_random 29381 56 + 172810 CTGGCCCTACCTCTGCCCTGGCCATACCCTTGCCCTGGCCTGGACCCCAGTCCTGG s panTro5.chrY 288113 56 + 26350515 ctggccctacctctgccctggccatacccttgccctggcctggaccccagtcctgg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29318 56 + 66344 ctggccctacctctgccctggccatacccttgccctggcctggaccccggtcctgg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5806 56 - 112215 ctggccctacctctgccctggccatacccttgccctggcctggaccccggtcctgg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474945 39 + 115148730 gtggctctacctc-----------------agccctggcctggaccccggtcctgg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27480 56 - 38383 CTGGCCCTACTTGTGCCCTGGCCATACCCTTGCCCTGGACTGGACTCTGATCCTGA i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72131 50 + 473220 ctggtcctacctctgccttggccatacccttgccctggcctggaccctgg------ i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730322 56 - 6934359 ctggccctacctctgccctggccataccctcaccctggcctgcagtctggtcctgg i colAng1.NW_012115910v1 C 0 I 6 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e papAnu3.chrUn_NW_003942124v1 17682 50 - 56717 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=3276.000000 s hg38.chr14_KI270725v1_random 29437 1 + 172810 T s panTro5.chrY 288169 1 + 26350515 t i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29374 1 + 66344 t i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5862 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474984 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27536 1 - 38383 T i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17732 1 - 56717 T i papAnu3.chrUn_NW_003942124v1 I 50 I 38 s manLeu1.NW_012099899v1 72181 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730384 1 - 6934359 t i colAng1.NW_012115910v1 I 6 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=88657.000000 s hg38.chr14_KI270725v1_random 29438 38 + 172810 CCTTGTCCTGCCCCAGCCATGGCCCTGGCCCTGCCCTG s panTro5.chrY 288170 38 + 26350515 ccttgtcctgccccaactgtggccctggccctgctctg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29375 38 + 66344 ccttgtcctgccccagctgtggccctggccctgccccg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5863 38 - 112215 ccttgtcctgccccagccgtggccctggccctgccctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114474985 38 + 115148730 ctctgtcctgccccagccgtggccctggccctgccttg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27537 38 - 38383 CCTTGTCCTGCCCCAGCTGTGGCCCTGGCCCTGCCCTG i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72182 38 + 473220 ccttatccttccccaaccacggccctggccccaccttg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730385 38 - 6934359 ccttgtcctgccccagctgtggccctggccctgccctg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e papAnu3.chrUn_NW_003942124v1 17733 38 - 56717 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=62710.000000 s hg38.chr14_KI270725v1_random 29476 20 + 172810 CCTGTGCCCTGTTCTATCCT s panTro5.chrY 288208 20 + 26350515 cctgtgccctgttctatcct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29413 20 + 66344 cctgtgccctgttctatcct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5901 20 - 112215 cctgtgccctgttctatcct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475023 20 + 115148730 cctgtgccctgttctatcct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27575 20 - 38383 CCTGTACCCTGTTCAATCCT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17771 20 - 56717 CCTGTGCCCTGTTCTATCTT i papAnu3.chrUn_NW_003942124v1 I 38 I 50 s manLeu1.NW_012099899v1 72220 20 + 473220 cctgtgccctgttctgtctt i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730423 20 - 6934359 CCTGTACCCTGTTCTATCCT i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=123301.000000 s hg38.chr14_KI270725v1_random 29496 50 + 172810 GGGCTGGCCCTGCCATGACCTGGTCTTGCCATTGCCCTGCCCTAGCCTGC s panTro5.chrY 288228 50 + 26350515 gggctggccctgccatggcctgatcttgccattgccctgccctagcctgc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29433 50 + 66344 ggactggccctgccatggcctggtcttgccattgccctaccctagcctgc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5921 50 - 112215 gggctggccctgccatggcctggtcttgccattgccctgccctagcctgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475043 50 + 115148730 gggcttgctctgccatggcctggtcttgccattgccctgccctagcctgc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27595 50 - 38383 GGGCTGGCCCTGCCGTTGCCTGGTCTTGCTATTGCCCTGCCCTAGCCTGC i cerAty1.NW_012006010v1 C 0 C 0 s manLeu1.NW_012099899v1 72240 50 + 473220 gggctggccctgccatggcctggtcttgttattgccctgccctagcctgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730443 50 - 6934359 GGGCTGGCCCTGCCATGGCCTGGTCTTGCTATTGCCCTGCCCTAGCCTCC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e papAnu3.chrUn_NW_003942124v1 17791 50 - 56717 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=11192.000000 s hg38.chr14_KI270725v1_random 29546 31 + 172810 CATGCTTGTGCCCTAGATCTGCCCCGCTTGT s panTro5.chrY 288278 26 + 26350515 cttgcttgtgccctagatctgcc----ttg- i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29483 26 + 66344 cctgcttctgccctagatctgcc----ccg- i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 5971 31 - 112215 cctgcttgtgccctagatctgcctcgcttgt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475093 26 + 115148730 cctgcttgtgccctagatctgcc----ctg- i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27645 9 - 38383 CTTGCTTGT---------------------- i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17841 9 - 56717 CCTGCTTGT---------------------- i papAnu3.chrUn_NW_003942124v1 I 50 C 0 s manLeu1.NW_012099899v1 72290 9 + 473220 cctgcttgt---------------------- i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730493 9 - 6934359 CTTGCTTGT---------------------- i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=22268.000000 s hg38.chr14_KI270725v1_random 29577 16 + 172810 GCCCTAGATCTGCCCC s gorGor5.CYUI01000689v1 6002 16 - 112215 gccctagatctgcccc i gorGor5.CYUI01000689v1 C 0 C 0 s cerAty1.NW_012006010v1 27654 16 - 38383 GCCCTAGATCTGCCCC i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17850 16 - 56717 GCCCTAGATCTGCCCT i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s manLeu1.NW_012099899v1 72299 16 + 473220 gccctagatctgccct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730502 16 - 6934359 GCCCTAGATCTGCCCC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 8999017 1090 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I e nomLeu3.chr7b 114475119 0 + 115148730 C e panPan2.chrUn_NW_014019468v1 29509 0 + 66344 C e panTro5.chrY 288304 0 + 26350515 C a score=42487.000000 s hg38.chr14_KI270725v1_random 29593 12 + 172810 AGCCTTTGCCCC s panTro5.chrY 288304 11 + 26350515 -gcctttgcccc i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29509 11 + 66344 -gcctttgcccc i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6018 12 - 112215 ggcctttgcccc i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9000107 12 + 13868332 GGCCTTTGCCCC i ponAbe2.chr2a_random I 1090 I 1634 s nomLeu3.chr7b 114475119 11 + 115148730 -gcctttgcccc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27670 12 - 38383 GGCCTTTGCTCT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17866 12 - 56717 GGCCTTTACTCC i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s manLeu1.NW_012099899v1 72315 12 + 473220 ggcctttgctcc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730518 12 - 6934359 GGCCTTTGCTCT i colAng1.NW_012115910v1 C 0 C 0 e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=37902.000000 s hg38.chr14_KI270725v1_random 29605 17 + 172810 TGTCTTGGTTCTAACCT s panTro5.chrY 288315 16 + 26350515 -atctttgttgcagcct i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29520 16 + 66344 -gtcttggttctatcct i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6030 17 - 112215 tgtcttggttctagcct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475130 17 + 115148730 tgtattggttctagcct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27682 17 - 38383 TTTCTTGGTTCTAGCAC i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17878 17 - 56717 TGTCTTGGTTCTAGCCG i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s manLeu1.NW_012099899v1 72327 17 + 473220 tgtcttggttctagccg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730530 17 - 6934359 TGTCTTGGTTCTAGCAC i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e chlSab2.chr5 43290635 3383 - 75399963 I a score=1369825.000000 s hg38.chr14_KI270725v1_random 29622 398 + 172810 TGACTCAGCCCTGGACCTTCCCTGACCTTGCCTCAGCCCTGGCACTACCCTGGCCTTGCCTTGGCATTTGCCCTACCCTCTCTATGGCCTGGCTGTGGTCCTGCCCTGCTCTGCTCTTGTTCTGTCCTGGCACAGCCCTGGCCCTGGCCGTGGCCCTG------CTGTATCACTGGCTCTGGTCCTGCCCTTATGCAGACCTGACCCTGCCACTGCCTTGGCTTTGGCCTGGACCTTGGCCATACAGTGACCCTGCCATGACCCTTTCCTGGCCCTGGCCTGGAACCTGGCCCTGCCAAGGACTCGCCCTGGCTCTGTCATGGCCCTGGCCCTTTCCTGGATTTGGATGTGTCCTGTCCCTTATTTGCCCCGGCCCTTCCCTGGCTCTGCCATACCCCTTCTCT s panTro5.chrY 288331 398 + 26350515 tgactcagccctggaccttccctgaccttgcctcagccctggcattaccctggccttgccttggcatttgccctactctctctatggcctggctctggtcctgccctgctctgctcttgttctgtcctggcacagccctggccctgtccctggccctg------ccatatcactggctctggtcctgcccttatgcaggcctgaccctgctcctgccttggctttggcctggaccttggccataaagtgaccctgccatgaccctttcctggccctgacctggaacctggccctgccaaggactcaccctggctctgtcatggccctggccctttcctggatttggatgtgtcctgtcccttatttgccctggcccttccctggctctgCCATACCCTTTCTCT i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29536 387 + 66344 tgactcagccctggaccttccctgaacttgcctgagccctggcactaccctggccttgccttggcatttgccctactctctctatggcctggctctggtcctgcc-----ctgctcttgttctgtcctggcacagccctggccc------tggccctg------ccgtatcactggctctggtcctgcccttatgcaggcctgaccctgcccctgccttggctttggcctggaccttggccatacagtgaccctgccatgaccctttcctgtccctggcctggaacctggccctgccaaggactcgccctggctctgtcatggccctggccctTTGCTGGATTTGGATGTGTCCTGTCCCTTATTTGCCCCAGCCCTTCCCTGGCTCTGCCATACCCCTTCTCT i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6047 398 - 112215 tgactcagccctggaccttccctgaccttgcctcagccctggcactaccctggcattgccttggcatttgccctactctctctatggcctggctgtggtcctgccctgctctgctcttgttctgtcctggcacagccctggccctggccctggccctg------ccgtatcactggctctggtcctgcccttatgcagacctgaccctgccactgccttggctttggcctggaccttggccatacagtgaccctgccatgaccctttcctggtcctggcctggaacctggccctgccaaggactcgccctggctctgtcatggccctggccctttcctggatttggatgtgtcctgtcccttatttgccccggcccttccctggctctgCCATACCCCTTCTCT i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475147 374 + 115148730 tgactcagccctggaccttccctgaccttgcctcagcactggcaataccctagacttgccttggcatttgccctactgtctctatggcctggctctggtcctgccctgctctgctcctgttctgtcctggcacagccctggccc------tggccctg------ccatatcactggctctggtcctgcccttatgcaggcctaacactgcccctgccttggctttggcctggaccttggccatacagtgaccctgccatgacccttt------------------cctggccctgccaaggactcaccctggctctgtcatggccctggccctTTCCTGGATTTGGATGTGTCCTGTCCCATATTTGCCCTGGCTCTTCCCTGGCTCTGCCATACCCCTTCTCT i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 27699 387 - 38383 TGAGTCAGCCCTGGACCTTCCCTGACCTTGTCTCAGCCCTGGCACTGCCCTGGCCTTGCCTTGGCATTTGCCCTACTCTCTCTAATGCCTGCCTCAGATCCTGCCTTGCTCTGCTCTTGTTCTGTCCTGGCACAgccctggccctggccctggccctggt-----------------cctggtcctgccctTCTGCAGGCCTGACCCTGCCACTGCTCTGTCTTAGACCTGGACCTTGGCCATACAGTGACCCTGCCTTGACCCTTTCCTGGCCCTGGCCTGGAACGTGGCCATGCCAAGGACTCGCCCTGGCTCTGTCATGGCCCTGGCATTTTATTGGATTTGGATGTGTCCTGTCCCTTATTTGCCCCAGCCGTTCCCTGGCTCTTCCCTTCCACTTCTCT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 17895 398 - 56717 TGACTCAGTCCTGGACCTCCTCTGACTTTGCCTCAGCCTTGGCACTACCCTGGCCTTGCCTTGGCATTTGCCCTGCCCTCTCTATGGTATGGCTCTGGTCCTGTCCTGTTCTGCTCTTGTTCTGTCCTGGCACAGCCCTGAACTTGGCCCTGCCCCTGGTCTTGCCATATCCCTGGCCCTGGCCCTGCCCTTATGCAGACCTGACCCTGCCCTTGCCCTGGCTTTGGCCTGGACCTTGACCATATAGTGACCTTGCCATGACCCTT------CCCTGGCCTGGAACGTGGTCCTGCCAAAGACTCGCCCTGGCTCTGTCATGGCCAGGGCCCTTTCCTGGACTTGGACGTGTCCTGTTCCTTATTTGCGCTGGCCCTTCCCTGGCTCTGCCCTACCTCTTCTCT i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294018 404 - 75399963 TGACTCAGTcctggacctcctctgaccttgcctcagccttggcactaccctggccttaccttggcatttgccctgccctctctatggtgtggctctggtcctgccctgttctgctcttgttctgtcctggcacagccctggccttggccctgcccctggtgctgccatatccctggccctggccctgccctcatgcagacctgaccctgcccttgccctggctttggcctggaccttggccatatggtgactctgccatgacccttccctggccctggcctgaaacctggccctgccaaagactcgccttggctctgtcatggccatggccctttcctggacttggacgtgtcctgtccctTATTTACCCTGGCCGTTCCCTGGCTCTGCCCTACCTCTTCTCT i chlSab2.chr5 I 3383 C 0 s manLeu1.NW_012099899v1 72344 404 + 473220 tgactcagtcctggacttcctctgaccttgcctcagccttggcactaccctggcctttccttggcgtttgccctgccctctctacggcgtggctctggtcctgccctgttctgctcttgttctgtcctggcatagccctggccttggccctgcccctggtgctgccatatccctggccctggtcctgcccttatgcagacctgaccctgcccttgccctggctttggcctggaccttgaccatatagtgactcttccatgacccttccctggccctggcctggaacctggccctgccaaagactcgccctggctctgtcatggctatggccctttctgggacttggacgtgtcctgtcccttatttgccctggcccttccctggctctgccctCCCTCTTCTCT i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730547 369 - 6934359 TGACTCAGCCCTGGACCTTCCCTGACCTTGCCTCAGCCCTGGCACTGCCCTGGCCTTGCCTTGGCATTTGCCCTGCCCTCTCTATGGTGTGGCTCTGGTCCTGCCCTGTTCTGCTCTTGTTCTGTCCTGGCACAGCCCTGGC-----------------------------------CCTGGTCCTGCCCTTATGCAGGCTTGACCCTGCCACTGCCCTGGCTTTGACCTGGACCTTGGCCATACAGTGACCCTGACTTGACGCTTTCCTGGCCCTGGCCTGGAACCTAGCCCTGCCAAGGACTCGCCCTGGCCCTGTCATGGCCCTGGCATTTTCTTGGATTTGCTTGTGTCCTGTCCCTTATTTGCCCCAGCCCTTCCGTGGCTCTGCCCTTCCACTTCTCT i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I a score=5500.000000 s hg38.chr14_KI270725v1_random 30020 1 + 172810 G s panTro5.chrY 288729 1 + 26350515 G i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29923 1 + 66344 g i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6445 1 - 112215 G i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475521 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 28086 1 - 38383 G i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 18293 1 - 56717 G i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294422 1 - 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72748 1 + 473220 G i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730916 1 - 6934359 G i colAng1.NW_012115910v1 C 0 C 0 s rhiRox1.KN299446v1 14222 1 + 132174 g i rhiRox1.KN299446v1 N 0 I 149 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I a score=7923.000000 s hg38.chr14_KI270725v1_random 30021 5 + 172810 GGGTA s panTro5.chrY 288730 5 + 26350515 GGGTa i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29924 5 + 66344 gggta i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6446 5 - 112215 gggta i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475522 5 + 115148730 GGGTa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 28087 5 - 38383 GGGTA i cerAty1.NW_012006010v1 C 0 I 2 s papAnu3.chrUn_NW_003942124v1 18294 5 - 56717 TTCTA i papAnu3.chrUn_NW_003942124v1 C 0 I 2 s chlSab2.chr5 43294423 5 - 75399963 TTCTA i chlSab2.chr5 C 0 I 15 s manLeu1.NW_012099899v1 72749 5 + 473220 TTCTA i manLeu1.NW_012099899v1 C 0 I 2 s colAng1.NW_012115910v1 6730917 5 - 6934359 GGGTA i colAng1.NW_012115910v1 C 0 I 2 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e rhiRox1.KN299446v1 14223 149 + 132174 I a score=34228.000000 s hg38.chr14_KI270725v1_random 30026 29 + 172810 GGGCCAGGGTCAGGACCAGACCAGGGCAG s panTro5.chrY 288735 19 + 26350515 gggccagggtcaggaccag---------- i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29929 19 + 66344 ggaccagggtcaggaccag---------- i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6451 29 - 112215 gggccagggtcaggaccagaccagggcag i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475527 29 + 115148730 gggccagggtcaggaccagaccagggcag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 28094 29 - 38383 GGGACAGGGTCAGGACCAGGCCAGGGCAG i cerAty1.NW_012006010v1 I 2 C 0 s papAnu3.chrUn_NW_003942124v1 18301 13 - 56717 GTggtagggc----------------cag i papAnu3.chrUn_NW_003942124v1 I 2 C 0 s manLeu1.NW_012099899v1 72756 13 + 473220 ggggtagggc----------------cag i manLeu1.NW_012099899v1 I 2 C 0 s colAng1.NW_012115910v1 6730924 29 - 6934359 gggacagggtcaggaccaggccagggcag i colAng1.NW_012115910v1 I 2 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e rhiRox1.KN299446v1 14223 149 + 132174 I e chlSab2.chr5 43294428 15 - 75399963 I a score=244376.000000 s hg38.chr14_KI270725v1_random 30055 75 + 172810 GGTCAGGACCAGGGTAGGGCCATGGTAAGGCCTGAAGATGGGAAGGGCCAGGGCAGCGGCTGGACCAGGGAAGGG s panTro5.chrY 288754 63 + 26350515 ------------ggtagggccatggtaaggcctgaagttgaggagggccagggcagtcgtaaaaccagggaaggg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 29948 63 + 66344 ------------ggtagggccatggtaagtcctgaagatgggaagggccagggcagcggcaggaccagggaaggg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6480 75 - 112215 gttcaggaccagggtagggccatggtaaggcctgaagatgggaagggccagggcagcggctggaccagggaaggg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475556 75 + 115148730 ggtcaggaccagggtatggccatggtaaggcctgaagatgggaagggccagggcagcagcaggaccagtgaagga i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 28123 75 - 38383 GGTAAGGACCAGGGTAGGGCCTTGGTAAGGCCTGAAGATGGGAAGGGCCAGGGCAGCGGCAGGGCCAGGGAAGGG i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 18314 75 - 56717 ggtcaggaccagggtagggtcatggtaaggcctaaagatgggaaggatcagggtagcgacagggccatggagggg i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294443 75 - 75399963 ggtcaggaccagggtagggtcatggtaaggcctgaagatgggaagggccagggtagtgacagggccatggagggg i chlSab2.chr5 I 15 C 0 s manLeu1.NW_012099899v1 72769 75 + 473220 ggtcacgaccagggtggggccatggtaagacctggagatgggaagggccagggtagcaacagggccatggagggg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6730953 75 - 6934359 ggtcagaaccagggtagggccttggtaaggcctgaagatgggaagggccagggcagcggcagggccagggaaggg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e rhiRox1.KN299446v1 14223 149 + 132174 I a score=5005.000000 s hg38.chr14_KI270725v1_random 30130 1 + 172810 T s panTro5.chrY 288817 1 + 26350515 t i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30011 1 + 66344 t i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6555 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475631 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 28198 1 - 38383 T i cerAty1.NW_012006010v1 C 0 I 6475 s papAnu3.chrUn_NW_003942124v1 18389 1 - 56717 t i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294518 1 - 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72844 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01010889v1 1432 1 - 1640 t i nasLar1.chrUn_JMHX01010889v1 N 0 C 0 s colAng1.NW_012115910v1 6731028 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e rhiRox1.KN299446v1 14223 149 + 132174 I a score=14949.000000 s hg38.chr14_KI270725v1_random 30131 5 + 172810 CAGGT s panTro5.chrY 288818 5 + 26350515 caggg i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30012 5 + 66344 caggg i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6556 5 - 112215 caggg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475632 5 + 115148730 caggg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 34674 5 - 38383 caggc i cerAty1.NW_012006010v1 I 6475 C 0 s papAnu3.chrUn_NW_003942124v1 18390 5 - 56717 cgggg i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294519 5 - 75399963 cggga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72845 5 + 473220 caggg i manLeu1.NW_012099899v1 C 0 C 0 s nasLar1.chrUn_JMHX01010889v1 1433 5 - 1640 catat i nasLar1.chrUn_JMHX01010889v1 C 0 N 0 s colAng1.NW_012115910v1 6731029 5 - 6934359 caggg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e rhiRox1.KN299446v1 14223 149 + 132174 I a score=132865.000000 s hg38.chr14_KI270725v1_random 30136 45 + 172810 CCAGGGATGTAGTAGGACTAGGGGCAGAGCCAGCACT-----------AGGGCTGA s panTro5.chrY 288823 44 + 26350515 ccagg-ATGTGGTAGGACTAGGGGCAGAGCCTGCACT-----------AGGGCTGA i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30017 45 + 66344 ccagggatgtggtaggactaggggaagagctggcact-----------agggctga i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6561 45 - 112215 ccagggatgtagtaggactaggggcagagccggcact-----------agggctga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475637 45 + 115148730 acagggatatggtaggactaggggcagagccggcact-----------agggctga i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 34679 45 - 38383 ccagggatatggtgagactaggggcagagccagcgct-----------agggctga i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 18395 39 - 56717 ccagggatatggtaggactaggggcagtgccagCACT-----------AG------ i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294524 55 - 75399963 ccagggatatggtaggact-ggggcagcaccagcactagggctgagcgagggcagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72850 45 + 473220 ccggggatatggtaggactagagacagggccagtgct-----------agggcaga i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731034 45 - 6934359 ccagggatatggtaagactaggggcagagccagcgct-----------tgggctga i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e rhiRox1.KN299446v1 14223 149 + 132174 I a score=40028.000000 s hg38.chr14_KI270725v1_random 30181 10 + 172810 GCCAGGGCAG s panTro5.chrY 288867 10 + 26350515 GCCAGGACAG i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30062 10 + 66344 gccagggcag i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6606 10 - 112215 gccagggcag i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475682 10 + 115148730 gccagggcag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 34724 10 - 38383 gccagagcag i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43294579 10 - 75399963 gccagggcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72895 10 + 473220 gccaggTCAG i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731079 10 - 6934359 gccagggcag i colAng1.NW_012115910v1 C 0 C 0 s rhiRox1.KN299446v1 14372 10 + 132174 gccagggcAG i rhiRox1.KN299446v1 I 149 N 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I e papAnu3.chrUn_NW_003942124v1 18434 0 - 56717 C a score=95429.000000 s hg38.chr14_KI270725v1_random 30191 40 + 172810 AGCAGGAGAGATTACTTTAGGCTATTATGTAAAA-TTTTTA s panTro5.chrY 288877 40 + 26350515 AGCAGGAGAGATTACATAAATCTATTATATAAAA-TTTTTA i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30072 40 + 66344 agcaggAGAGATTACATAAGGCTATTATGTAAAA-TTTTTA i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6616 40 - 112215 agcaggAGAGATTACTTTAGGCTATTACGTAAAA-TTTTTA i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475692 41 + 115148730 agcaggAGAAATTACATTAGGCTATTATGTAAAACTTTTTA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 34734 40 - 38383 agcaggtcagaTTATATTAGGCTATTATTTACAA-ATTTTG i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 18434 21 - 56717 -------------------GAATACTATTTAAAA-ATTTTG i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294589 40 - 75399963 agcaggAGAGATTACGTTAGAATATTATTCAAAA-ATTTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72905 40 + 473220 AGCAGGAAAGATTATGTTAGAATATTATTTAAAA-TTTTGT i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731089 40 - 6934359 agcaggAGAGATTACATTAGGCTATTATTTAGAA-ATTTTG i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 13539 858 - 120202 I a score=22585.000000 s hg38.chr14_KI270725v1_random 30231 5 + 172810 TTTTA s panTro5.chrY 288917 5 + 26350515 TTTCA i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30112 5 + 66344 TTTTA i panPan2.chrUn_NW_014019468v1 C 0 C 0 s gorGor5.CYUI01000689v1 6656 5 - 112215 TTTTA i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475733 5 + 115148730 TTTTA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 34774 5 - 38383 TTTTA i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 18455 5 - 56717 TTTTA i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294629 5 - 75399963 TTTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72945 5 + 473220 TTTTA i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731129 5 - 6934359 CTTTA i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 14397 5 - 120202 TTTTA i rhiBie1.NW_016807452v1 I 858 I 711 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I a score=1776516.000000 s hg38.chr14_KI270725v1_random 30236 543 + 172810 GATTTTTAAGATAACTATAGTAGTAGTAAT---GTCTA--TACTATGTTGTTTGTAATAGTAATAATATTTGTAGTA---A----TCACTAAATTTTAACTAATACTATCTTTGCTTCCAGTAGTGTTCTATGAGTATAATTTTATCAACATGTAAATATGTGAGGCAttgattctcacaataattctatgtgctaggtacttaaagcatctccattttccaaatgtaggaaa--------caggcataaagaagttaaatacttggccaGAt---------tactcctgtaatcccagcactttgggaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctact-aaaaatgcacaaaaaGAACTAATTT--------AAGTTTCTTGTAGGATTCTGGTTATAAAACACTGGTCAAACACacagggcatggatagggcagggccagggacaaggtcaggccaggaaggGGCCAGGGCCAAGGCAGGGCCAGAGCTGGAATTGGAGGTGTCCTGGTC-TGATTtgccctgccccgacgttg s panTro5.chrY 288922 550 + 26350515 GATTTTTAAGATAACTATAGTAGTGGTAATAATGTCTA--TACTATGTTGTTTGTAATAGTAATAATATTTACAGTA---AATAATCACTAAATTTTAACTAATACTATATCTGCTTCCAGTACTGTTCTATGAGTATAATTTTATCAATATGTAAATATGTGAGGCAttgatcctcacaataattctatgtgctaggtacttaaagcatccccattttccaaatgtaggaaa--------caggcataaagaagttaaatacttggccaGAt---------tactcctgtaatcccagcactttgggaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctact-aaaagtgcacaaaaaGAGCTGATTT--------AAGTTTCTTGTAGGATTCAGGTTATAAAACACTGGTCAAACACacagggcatggatagggcaggaccagggacaaggtcaggtgaggaaggggccagggccaaggcagggccagagcTGGACTTGGAGGTGTCCTGGTC-TGATTTGCCCTGCCCCTACATTG i panTro5.chrY C 0 C 0 s panPan2.chrUn_NW_014019468v1 30117 543 + 66344 GATTTTTAAGATAACTATAGTAGTAGTAATAATGTCCA--TACCATGTTGTTTGTAATAGTAATAATATTTGCAGTA---AATAATCAGTAAATTTTAACTAATACTATCTTTGCTTCCAGTAGTGTTCTATGAGTATAATTTTATCAATATGTAAATTTGTGAGGCAttgattctcacaataattctatgtgctaggtacttaaaccatccccattttccaaatgtaggaaa--------caggcataaagaag--------ttGGCCAGAt---------tactcctgtaatcccagcactttggaaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctactaaaaaatgcacaaaaaGAACTGATTT--------AGGTTTCTTGTAGGATTCTGGTTATAAAACACTGGTAAAACACacagggcatggacagggcagggccagggacaaggtcaggccaggaaggGGCTAGGGCCAAGGCAGGGCCAGAGCTGGACTTGGAGGTGTCCTGGTC-TGATTTGCCCTGCCCCAACGTTG i panPan2.chrUn_NW_014019468v1 C 0 N 0 s gorGor5.CYUI01000689v1 6661 543 - 112215 GATTTTTAAGATAACTATAGTAGTAGTAAT---GTCTA--TACTATGTTGTTTGTAATAGTAATAATATTTGCAGTA---A----TCACTAAATTTTAACTAATACTATCTTTGCTTCCAGTAGTGTTCTATGAGTATACTTTTATCAACATGTAAATATGTGAGGCAttgattctcataataattctatatgctaggtacttaaagcatccccattttccaaatgtaggaaa--------caggcataaagaaggtaaatacttggccaGAt---------tactcctgtaatcccagcactttgggaggccaaggcaggcagatggcttgagctcaggagtttggaaccagcctgggcaacattgtgaaaccccatctctact-aaaaatgcacaaaaaGAACTAATTT--------AAGTTTCTTGTAGGATTCTGGTTATAAAACACTGGTCAAACACAcagggcatggatagggcagggccagggacaaggtcaggccaggaaggggccagggccaaggcagggccagagctggACTTGGAGGTGTCCTGGTC-TGATTTGCCCTGCCCCAACGTtg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114475738 550 + 115148730 GATTTTTAAGATAACTATAGTAGTAGTAATAATGTCTA--TACTATGTTGTTTGTAATAGTAATAATATTTGCAGTA---AATAATCACTAAATTTTAACTAACACTGTCTTTGCTTCCAGTAGTGTTCTATGAGTATAATTTTATCAATATGTAAATATGTGAGGCAttgattctcacaataattctatatgctaggtacttaaagcatcccaattttccaaatgtaggaaa--------caggcataaagaagtgaaatacttggccaggt---------taGTcctgtaatcccagcactttgggaagccaaggcaggcaaatggcttgagctgaggagtttgcaaccagcctgggcaacattgtgaaaccccgtctctact-aaaaatgcccaaaaaGAGCTGATTT--------AAGTGTCTTGTAGGATTCTGGTTCTAAAACACTGGTCAAACACAcagggcatggacagggcagggccagggacaagatcaggccaggaaggggccagggccaaggcagggccagAGCTGGACTTGGAGGTGTCCTGGCC-TGATTTGCCCAGCCCCAATGTtg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 34779 543 - 38383 GATTTTTGAGGTAACTAtagtagtaataataatatctg--tattatgttgtttgtaatagcagtagtatttgtagta---AATCATTACTAAATTTTAATTTATACTTTCTTTGCTTTCGGTAGTGTTCTATGAGTATAATTTTATAAATACGTATATATGTGAGGCATCGattctcacaattactctatgtgcttggtacttatggcatccccattttcctaacataggaaa--------cagacctaaagaggttaagtacttggccagat-----------------tactcccagcactttgggaggccaaggcagggggatggctcgagctcgggagattgggaccagcctggacaacactgtgaaaccccatctccact-aaaaatgtacaaaaatAGCTTATTA--------AAGTTTCTTGTAGGTTTCTGGTTGCAAAACACTGGTCAAATACACAGGGCTTGGTTTGGGCTgggccggggacaaggtcaggccaggaaggggccagggccaaggcagagccagagctagACTTGGAGGTGTCCTGGCCCTGATTTGCCCTGCCCCAACGTTG i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 18460 560 - 56717 GATTTTTAAGATAACTATAATAGTAGTAATACTATCTA--TACTATGTTATTTGTAATAGTAATAATGTTTGTAGTAGTTaataataactaaattttaatgagtactttctttgctcctggtactgtcttaagagtatagctatgtaaacatgtatatatgtgaggcattaattctcacaataactttatgtactaggtacttacagcattcccattttccaaatgtaagaaa--------caggcataaagaggttaaataCTTggcctggcacagtggctcactcctgtaatcccagcactctgggaggccaagtctggtggatggcatgagctcaggagttcgggaccagcctgggcaacattgtgaaaccctgtctgtact-aaaaatgcagaaaaatagctgATTagtttgtttaagttccttgtaagattctggttacgaaacattggtaaaatacacagGGCATGGATAGGGCAGGGCCAGAGATAAGGTCAGGCCAGGGAGGGGCCAGG-----------GCCAGAGCTGGACTTGGAAGTGTCCTGGCCTTGATTTGCCCTGCCCCAACCTTG i papAnu3.chrUn_NW_003942124v1 C 0 C 0 s chlSab2.chr5 43294634 571 - 75399963 TATTTTTAAGataactataatagtagtaatactatgta--tactatgtaatgtgtaataataataacgatagtagtaGTTACtaataactagattttaaccagtactttctttgttcctggtactgtcttaggagtataactatataaatatgtatatatgtgaggtattaattctcacagtaactttatgtactaggtgcttatagcattcccattttccaaatgtaagaaa--------caggcataaagaggttaaataCTTggcctggcacagtggctcactcctgtaatcccagcactctgggaggccaagtctggtggatggcatgagctcaggagttcgggaccagcctgggcaacattgtgaaaccctgtctctact-aaaaatgcagaaaaatagctgATTAGTTTGTTTAAGTTCCTTGTAGGATTCTGGTTATGAAACATTGGTGAAATACACAGGGCATGGATAGGGCAGGGCCAGAGATAAGGTCAGGCCAGGGAGGGGCCAGGGCCAAGGCAGGGCCAGAGCTGGACTTGAAAGTGTCCTGGCCTTGATTTgccctgccccaaccttg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 72950 581 + 473220 GGTTTTTAAGATAACTATAATAGTAACAATATTGTCTATGTACTATGTTATTTGCAATAGTAACAATGTTTGTGATAGTTagtaataactaaattttaaccagtactttctttgtttctggtactattttaagagtatagctatataaatgggtatatatgtgaggcattaattctcacagtaactctatatagtaggcacttacagcatccccattttccaaatgtaaaaaaggttacgtttggcataaagaggttaaataCTTggcctggcacggtggttcactcctgtaatcccagcactctgggaggccaagtctggtggacggcatgagctcagaagttcgggagcagcctgggcaacattgtgaaaccctgtctctact-aaaaatgcagaaaaatagcTCATTagtttgtttaagttccttgtaggattctggttatgaaacattggtcaaatACACAAAGCATGGACAGGGCAGGGCCAGAGATAAGGTCAGGCCAGGGAGGGGCTAGGGCCAAGGCAGGGCCAGAGCTGGACTTGGAAGTGTCCTGGCCTTGATTTGCCCTGCTCCAAccttg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731134 542 - 6934359 GATTTTTAAGATAACTATAGTAGTAATAATAATATCTG--TACTATGTTGTTTGTAATAGCAATAGTATTTGCAGTA---AATAATTACTAAATTTTACCTTGTACTTTTTTT-CTGCCGGTAGTGTTTTGTGAGTATAATTTTATAAATATGTATATATGTGAGGCAttgattctcacaattactctatgtgctaggtacttatggcatccccattttcctaacgtaggaag--------cagacttaaagaggttaagtacttggccaGAT-----------------tactcccagcactttgggaggccaaggcaggtggatggctcgagctcaggagattgagaccagcctggacaacactgtgaaaccccatctctact-aaaaatgcacaaaaatagcTTATTA--------AAGTTTTTTGTAGGATTTTGGTTATAAAGCACTGGTCAAATACACAGGGCATGGTTTGTGcagggccagggacaaggtcgagccaggaaggggccagggccaaggcagggccagagctagACTTGGAGGTGTcctggccctgatttgccctgccccaaggttg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 14402 711 - 120202 I a score=415339.000000 s hg38.chr14_KI270725v1_random 30779 150 + 172810 gcccagccctgctctggcacgtcctgtcatgccctgtccctggcctgagcattggccctgtccctgtcctgcttctggccctgccccggagttgaccaggcactgccatggcccagtcctg-cattgccctgccctcctctgccctggtgc s panTro5.chrY 289472 149 + 26350515 GCCCAGCCCTGCTCTGGCACTTCCTCTCATGCCCTGTCCCTGGCCTGAGCATTGGCCGTG-GCCTGTCCTGCTTCTGGCCCTGCCCCGGAGTTGACCAGCCACTGTCATGGCCCAGTCCTG-CATTGCCCTGCTCTCCTCTGCCCTGGTGC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7204 150 - 112215 gcccagccctgctctggcacgtcctgtcatgccctgtccctggcctgagcattggccctggccctgtcctgcttctggccctgccccggagttgaccaggcactgccatggcccagtcctg-cattgccctgccctcctctgccctggtgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476288 150 + 115148730 gcccagccctgctctggcacttcctgtcatgccgtgtccctggcctgagcattggccctggccctgtcctgcttctggccctgccttggagttgaccaggcactgccatggcccagtcctg-cattgccctgccctcttctgccctggtgc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35322 148 - 38383 GCCCAGCCCTGCTCTGGCACTTCCTACCATGCCCTGTCCCTGGCCTGAGCATTGGCCCTGGCCCTGTCCTGCTTCTGGCCCTGTCCTGGAGTTGACCAGGCGTTGCCATGGCCCAGTCCTGCCATCGCCTTGC---CCCCTGTCTTGGTGT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 19020 151 - 56717 GCCTGTCCCTGCTCTAGTGCTTCCTGCCATGCTCTGTCCCTGGCCTGAGCATTAGCTCTGGCGCTGTCCTGCTTCTGGCCCTGGCCTGGAGTTGACCAGGCACTGCCACGGCCCAGTCCTGCCATTGTCCTGCCCTCCTCTGCCCTGGTAT i papAnu3.chrUn_NW_003942124v1 C 0 I 79 s chlSab2.chr5 43295205 151 - 75399963 gcctgtccctgctctggtgcttcctgccatggcctgtgcctgtcctgagcattagctctggccctgtccttcttctagccctgccctggagttgaccaggcactgctatggcccagtcctgccattgtcctgttgtcttctgccctggtat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73531 151 + 473220 gcctgtccctgctctggcacttcctgccatgccctgtccctgtcctgagcattagctctggtcctgtcctgcttctggccctgccctggagttgaccaggcatcgccatggcccagtcctgccattgtcctgccctcctctgccctggtat i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731676 148 - 6934359 gcccagccctgctctggcatttcctgccatgccctgtccctggcctgagcattggccctggccctgtcctgcttctggccccgtcctggagttgaccaggcgttgccatggtccagtcctgccatcgccttgc---cctctgtcctggtgc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 14402 711 - 120202 I a score=13879.000000 s hg38.chr14_KI270725v1_random 30929 7 + 172810 taccatg s panTro5.chrY 289621 7 + 26350515 TGCCATG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7354 7 - 112215 taccatg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476438 7 + 115148730 tgccatg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35470 7 - 38383 TGCCGTG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43295356 7 - 75399963 tgtcgtg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73682 7 + 473220 tgtcatg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731824 7 - 6934359 tgccgtg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e rhiBie1.NW_016807452v1 14402 711 - 120202 I e papAnu3.chrUn_NW_003942124v1 19171 79 - 56717 I a score=19356.000000 s hg38.chr14_KI270725v1_random 30936 7 + 172810 gccctgc s panTro5.chrY 289628 7 + 26350515 GCCCATC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7361 7 - 112215 gccctgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476445 7 + 115148730 gccctgt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35477 7 - 38383 GCCTTGC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43295363 7 - 75399963 gccctgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73689 7 + 473220 gccctgc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731831 7 - 6934359 gccctgc i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016807452v1 15113 7 - 120202 GCCCTGC i rhiBie1.NW_016807452v1 I 711 N 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19171 79 - 56717 I a score=147871.000000 s hg38.chr14_KI270725v1_random 30943 65 + 172810 ttgggccctagctctgcctcgactctggacctgccctgactctgctcagccctggatctaccctg s panTro5.chrY 289635 65 + 26350515 TTGGGCCCTAGCTCTGCCTTGACTCTGGACCCGCCCTGATTCTGCTCAGCCCTGGATCTACACTG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7368 65 - 112215 ttgggccctagctctgcctcgactctggacctgccctgactctgctcagccctggatctaccctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476452 65 + 115148730 ctgggccctagctctgcctcgactctggacctgccctgaccctgctcagccctggatctaccctg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35484 65 - 38383 CTTGGCCCTAGCTCTGCCTCAACCCTCGACCTGCCCTGACCCTGCTCAGCCCTGGAACTACCCTG i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43295370 65 - 75399963 ctgggtcctagccctgcctcgactctggacctgccctgaccctgctcagccctggaactaccctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73696 65 + 473220 ctggaccctagccctgcctcaactctggacctgccctgaccctgctcagccctggaactaccctg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731838 65 - 6934359 cttggccctagctcttcctcaaccctcgagctgccctgaccgtgctcagccctggagctaccctg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19171 79 - 56717 I a score=8215.000000 s hg38.chr14_KI270725v1_random 31008 5 + 172810 actct s panTro5.chrY 289700 5 + 26350515 ATTCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7433 5 - 112215 actct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476517 5 + 115148730 actct i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35549 5 - 38383 CCTCT i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 19250 3 - 56717 ACT-- i papAnu3.chrUn_NW_003942124v1 I 79 I 48 s chlSab2.chr5 43295435 5 - 75399963 acttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73761 5 + 473220 actct i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731903 5 - 6934359 actct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I a score=105502.000000 s hg38.chr14_KI270725v1_random 31013 47 + 172810 gccttggtgtt-gccctcccatctctatggcctggctctggccatgcc s panTro5.chrY 289705 47 + 26350515 GCCTTGGTGTT-GCCCTCCCATCTCTATGGCCTGGCTCTGGCCCTGCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7438 46 - 112215 gccttggtgtt-gccctcccatctctatggcctggctctggccatg-c i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476522 47 + 115148730 gccttggtgtt-gccctcccatctctatggcctggctctggccctgcc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35554 48 - 38383 GCCTTGGTGCTGGTCCTCTCCTCTGTATGGCCTGGCTCTGGCCCTGCC i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43295440 48 - 75399963 gccttggtgttggccctcccttctctatggcctggctctggccctgcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73766 48 + 473220 gccttggtgttggccctcccctctctatggcctgactctggccctgcc i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731908 48 - 6934359 gccttggtgttggccctctcctctctatggcctggctctggccctgcc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19253 48 - 56717 I a score=15185.000000 s hg38.chr14_KI270725v1_random 31060 5 + 172810 ttgca s panTro5.chrY 289752 5 + 26350515 TTGCA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7484 5 - 112215 ttgca i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476569 5 + 115148730 ttgca i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35602 5 - 38383 TTGTA i cerAty1.NW_012006010v1 C 0 C 0 s papAnu3.chrUn_NW_003942124v1 19301 5 - 56717 TTGCA i papAnu3.chrUn_NW_003942124v1 I 48 I 815 s chlSab2.chr5 43295488 5 - 75399963 ttgca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73814 5 + 473220 ttgca i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731956 5 - 6934359 ttgta i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I a score=36139.000000 s hg38.chr14_KI270725v1_random 31065 19 + 172810 caggccatgctctgccctg s panTro5.chrY 289757 19 + 26350515 CAGGCCATGCTCTACCCTG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7489 19 - 112215 caggccatgctctgccctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476574 19 + 115148730 caggccatgctctgccctg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35607 14 - 38383 -----CATGCTCTGACCTG i cerAty1.NW_012006010v1 C 0 I 3 s chlSab2.chr5 43295493 19 - 75399963 caggccatgccctgccctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 73819 19 + 473220 caggccatgccctgccctg i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6731961 13 - 6934359 -----catgctctg-cctg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I a score=2498.000000 s hg38.chr14_KI270725v1_random 31084 3 + 172810 cat s panTro5.chrY 289776 3 + 26350515 CAT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7508 3 - 112215 cgt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476593 3 + 115148730 cgt i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43295512 1 - 75399963 --t i chlSab2.chr5 C 0 I 2 s manLeu1.NW_012099899v1 73838 1 + 473220 --t i manLeu1.NW_012099899v1 C 0 I 2 s colAng1.NW_012115910v1 6731974 3 - 6934359 cat i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e cerAty1.NW_012006010v1 35621 3 - 38383 I a score=377430.000000 s hg38.chr14_KI270725v1_random 31087 192 + 172810 gccccagcctgggcccagccctcatcctaccatattcctgaccccagccatacccttgttctggccatgaccctgccatggccctctcctggcccttccttggtcctgccctgcccttccatgccctggccttgccctcaccctgcattggccctgcactggtcctgccctgccctggcactgccttggccc s panTro5.chrY 289779 181 + 26350515 GTCCCAGCCTGGGCCCAGCCCTTGCCCTACCATATTCCTGACCCCAGCCATACCCTTGTTCTGGCCTTGACCCTTCTGCAGCACTGTCCTGGCCCTTCCTTGGTCTTTCCCTGCCCTTCCATGCCCTGGCCTTGCCCTCACCCTGCA-----------CTGGTCCTGCCCTGCCCTGGCAGTGCCTTGGCCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7511 191 - 112215 gccccagcctgggcccagccctcatcctaccatattcctgaccccagccatacccttgttctggccatgaccctgccgtggccctctcctggcccttccttggtcctgccctg-ccttccatgccctggccttgccctcaccctgcattggccctgcactggtcctgccctgccctggcactgccttggccc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476596 192 + 115148730 gtcccagcctgggcccagccctgttcctaccatattcctggccccagccgtacacttgttctgaccctgaccttaccctggccctctcctggcccttccttggtcatgccctgaccttccatgccctggccttgcccttaccctgcattggccctgcactggtcctgccctgccctggcactgccttggccc i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35624 181 - 38383 GTCCCAACCTGGGCCCAGCCCTGGTCCTACCGTGTTCCTGGCCCTGGCCGTACCCTTGTTCTGGCCCTGACCGTGCCCTGGCCCTCCTCTGGCACTTCCTTGGTCCTGCTCTGCCCTTCCATGTCCTGGCCTTGCCCTCA-----------CCCTGCACTGGTCCTGCTCAGCCCTGACACTGCCTTGACCC i cerAty1.NW_012006010v1 I 3 C 0 s chlSab2.chr5 43295515 170 - 75399963 gtcctagcctgggcccagccctggttctaccatattcctggccctggccgtacccttgtcctggccctgaccctgccctggccctgtcctggcccttccttggtccttccctgcccttccatgccccggccttgccctca----------------------ccctgcactgccctggcactgccttggccc i chlSab2.chr5 I 2 C 0 s manLeu1.NW_012099899v1 73841 181 + 473220 gtcccagcctgggcccagccctggttctaccgtgttcctggccctggctgtaccattgtcctggccctgagcctgctctggccttgtcctgacccttccttggtccttccctgcccttccacgccgcagccttgccctca-----------ccctgcattggccctgcattgccctggcactgccttggccc i manLeu1.NW_012099899v1 I 2 C 0 s colAng1.NW_012115910v1 6731977 192 - 6934359 gtcccaacctgggcccagccctggtcctaccgtgttcctggccctggccgtacccttgttctggccccgaccctgccctggccctcttctgccccttccttggtcctgctctgcccttccatgccctggccttgccctcaccctacactggccctgcactggtcctgctcagccctgatactgccttgaccc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9000119 1634 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I a score=1757.000000 s hg38.chr14_KI270725v1_random 31279 1 + 172810 c s panTro5.chrY 289960 1 + 26350515 C i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7702 1 - 112215 c i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9001753 1 + 13868332 c i ponAbe2.chr2a_random I 1634 I 1125 s nomLeu3.chr7b 114476788 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35805 1 - 38383 C i cerAty1.NW_012006010v1 C 0 C 0 s chlSab2.chr5 43295685 1 - 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 74022 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6732169 1 - 6934359 c i colAng1.NW_012115910v1 C 0 C 0 e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I a score=573515.000000 s hg38.chr14_KI270725v1_random 31280 301 + 172810 ggccctgccttctccctggccttgcctttgccctgccctggcctgaccccaggcctaccgagtccatgaaatgaccctggacctgccttgccatcctctgtcctggccctgtattgtccccaccatgctctggtccagcacttgccctagccctgttgctagtcctgccactgctatggccctgctctgtttttggccatgcgctgtgctaccctagccctgcc-----------ctgccttggccttgg------ccctaccatggccttctcctaccctggcctggccgtacactggccttttc-taccctggcctt s panTro5.chrY 289961 300 + 26350515 AGCTCTGCCTTCTCCCTGGCCTTGCCCTTTCCCTGCCCTTGCCTGACCCCAGGCCTATCAAGTCCTTGAAATGACCTTGGACCTGCCTTGCCATCATCTGTCCTGGTCCTGTAGTGTCCCCACCATGCTCTGGTC-AGCACTTACCCTGGCCCTGTTGCTAGTCCTGCCACTGCTATGGCCCTGCCCTGTTTTTGGCCATGCCTTGTGCTACCCTAGCCCTGCC-----------CTGCCTTGGTCTTGG------CCCTACCATGGCCTTTTCCTACGCTGGCCTGGCTGTACACTGGCCTTTTC-TACCCTGGCCTT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 7703 300 - 112215 ggccctgccttctccctggccttgcctttgccctgccctggcctgaccccaggcctactgagtccatgaaatggccctggacctgccttgccatcctctgtcctggccctgtattgtccccaccatgctctggtccagcgcttgccctagccctgttgctagtcctgccactgctatggccctgctctgtttttggccatgccctgtgctaccctagccctgcc-----------ctgccttggccttgg------ccctaccctggcctttt-ctaccctggccttgcccttccctgatcttgcc-ctgcctggcctt i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114476789 285 + 115148730 tgccctgccttctccctggccttgcccttgccctgccctggcctgactccaggcctaccaagtccatgaaatagccctggacctgccttgccatcctctgtcctggccctgtattgtccctaccatgctctggtccagcacctgccctggccctgttgctagtcttaccactgctatggccctgccctgtttttggccatgccctgtgctaccctagccctgcc-----------ctgccttggccttgg------ccctaccatggccttctcctaccctggc----------------cttttc-taccctggcctt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012006010v1 35806 301 - 38383 GACCCTGCCTTCTCCCCAGCCTTGTCCTTGCCCTGCCCTGGCCTGACCCTGGGCCTGCCATGTCCATGACATGGCCCTGGACCTGCCTTGCCATTCTCTGTCCTCGTCTTGTATTGTCCCCACCATGCTCTGGTCCAGCCCTTGCCCTGGCCCTGTTGCCAGTACTGCTACTACTATAGCCCTACCCTGTATTTGGCCATGCCCTGTGTTACCATAGCCCTGCC-----------CTGCGTTGGCCCTGG------CCCTACCCTGGCCTTCTCTTATCCTGGCCTGTCCCTACCCTGGCCTTTTC-TACCCTGGCCTT i cerAty1.NW_012006010v1 C 0 N 0 s chlSab2.chr5 43295686 302 - 75399963 gg-----------ccctgccttctccctggccgtacccttgcctgcccctgggcctaccctgtccatggcatggccctggacctgccttgtcatcctctgttctggccatatattgaccccaccgtgccttgatccagcacttgccctggccctgtgcttagtcctgcccctgctatggccctgatctgcttttggccatgccctgtgctaccctaaccctgccctaacctggttctgacctggccttgg------ccctaccctggccttctcctaccctggccttgccctaccctgttcttgccatgccctggcctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 74023 307 + 473220 gg------cttctctccggccttgccctggccctacccttgcctgcccctgggcctaccctgtccatgacatggccctggacctgccttgtcatcctctgttctggccgtgtattgtccccaccatggcctggtccagtgcttgccctggccctgtgcctagtcctgccgctgctatagtcctgccctgcttttggccatgccctgtgctactctagccctgccctgacctgcttctgacctggccctggccctacccctaccctggccttctcctaccctggccttgtcctaccctggccttgccctgtcct------ i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6732170 301 - 6934359 ggccctgccttctccccggccttgtccttgccctgccctggcctgaccctgggcctaccatgtccatgacatggccctggacctgccttgctgttctctgtcctggtcttgtattgtccccaccatactctagtccagcccctgccctggccctgttggtagtcctgctactactatggccctgccctgtttttggccatgtcctgtgttaccgtggccctgcc-----------ctgcattggccctgg------ccctgccctggccttctcttatcctggcctgcccctaccctggccttttc-taccctggactt i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I a score=2752.000000 s hg38.chr14_KI270725v1_random 31581 10 + 172810 gcccttccct s panTro5.chrY 290261 10 + 26350515 GCCCTTCCCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8003 10 - 112215 gccctgccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477074 10 + 115148730 gccgttccct i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43295988 10 - 75399963 ggctttgcct i chlSab2.chr5 C 0 I 50 s colAng1.NW_012115910v1 6732471 4 - 6934359 --ttct---- i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e manLeu1.NW_012099899v1 74330 0 + 473220 C a score=1419.000000 s hg38.chr14_KI270725v1_random 31591 9 + 172810 ggtcttggc s panTro5.chrY 290271 9 + 26350515 GGTCTTGCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8013 1 - 112215 g-------- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477084 9 + 115148730 gatcttgcc i nomLeu3.chr7b C 0 C 0 s manLeu1.NW_012099899v1 74330 9 + 473220 ggccttggc i manLeu1.NW_012099899v1 C 0 I 62 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e colAng1.NW_012115910v1 6732475 0 - 6934359 C e chlSab2.chr5 43295998 50 - 75399963 I a score=14647.000000 s hg38.chr14_KI270725v1_random 31600 27 + 172810 ctgccctggc----cttgccctgcactggcc s panTro5.chrY 290280 27 + 26350515 CCGCCCTGGC----CTTGCCCTGGCCTGGCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8014 25 - 112215 --gccttggc----tttgccttatcctggtc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477093 31 + 115148730 ctgccctggccttgcttgccctgccctggct i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6732475 24 - 6934359 ---acctggc----cttgcccttccctggcc i colAng1.NW_012115910v1 C 0 I 51 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e manLeu1.NW_012099899v1 74339 62 + 473220 I e chlSab2.chr5 43295998 50 - 75399963 I a score=5835.000000 s hg38.chr14_KI270725v1_random 31627 17 + 172810 ttggctttgcctt-atcc s panTro5.chrY 290307 17 + 26350515 TTGGCTTCGCCTT-ATCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8039 18 - 112215 ctggttctgccctgaccc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477124 17 + 115148730 ttggccttgcctt-atcc i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I e manLeu1.NW_012099899v1 74339 62 + 473220 I e chlSab2.chr5 43295998 50 - 75399963 I a score=3808.000000 s hg38.chr14_KI270725v1_random 31644 5 + 172810 tggtc s panTro5.chrY 290324 5 + 26350515 TGGTC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8057 5 - 112215 tggcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477141 5 + 115148730 tggtc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296048 5 - 75399963 tggtt i chlSab2.chr5 I 50 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I e manLeu1.NW_012099899v1 74339 62 + 473220 I a score=5111.000000 s hg38.chr14_KI270725v1_random 31649 13 + 172810 ctg---------------------------------------gttctgcc------ct s panTro5.chrY 290329 52 + 26350515 CTG------CCCTGGCCCTGCTCGTTCTCTGGATCCTCTCTGGTTCTGCCTTCTCCCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8062 35 - 112215 ttg-----------------------ctctggatcctctctggttctgctttctccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477146 58 + 115148730 ctggttctgccctggccttgcccttgctctggatcctctctgattctgccttctccct i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296053 13 - 75399963 ---------------------------------------------ctgccttctccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 74401 13 + 473220 ---------------------------------------------ctgccttctccct i manLeu1.NW_012099899v1 I 62 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 19306 815 - 56717 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I a score=8170.000000 s hg38.chr14_KI270725v1_random 31662 6 + 172810 gaccct s panTro5.chrY 290381 6 + 26350515 GGCCCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8097 6 - 112215 ggccct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477204 6 + 115148730 ggccct i nomLeu3.chr7b C 0 C 0 s papAnu3.chrUn_NW_003942124v1 20121 6 - 56717 caccct i papAnu3.chrUn_NW_003942124v1 I 815 C 0 s chlSab2.chr5 43296066 6 - 75399963 ggtcct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 74414 6 + 473220 ggctct i manLeu1.NW_012099899v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e colAng1.NW_012115910v1 6732499 51 - 6934359 I a score=54168.000000 s hg38.chr14_KI270725v1_random 31668 42 + 172810 ggccttgctctggccctgtccctggcccagccttgaccctga s panTro5.chrY 290387 42 + 26350515 GCCCTTGTTCTGGCCCTGTCCCTGACTCAGCCTTGACCCTGG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8103 42 - 112215 gcccttgctctggccctgtccctggcccagccttgaccctga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477210 42 + 115148730 gcccttgctttggccctgtccctggcccagccttgaccctgg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296072 42 - 75399963 gcccttgctctggccctgtccctggcccaggcttgaccctgg i chlSab2.chr5 C 0 I 5 s manLeu1.NW_012099899v1 74420 42 + 473220 gcccttgctctggccctgtccctggcccaggcttggccctgg i manLeu1.NW_012099899v1 C 0 I 6 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 20127 0 - 56717 C e colAng1.NW_012115910v1 6732499 51 - 6934359 I a score=31488.000000 s hg38.chr14_KI270725v1_random 31710 35 + 172810 ccctggccctgacaatccccaggtctgacactggc s panTro5.chrY 290429 35 + 26350515 CCCAGGCTCTGACAATCCCCAGGCCCCACAATGGC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8145 35 - 112215 ccctggccctgacaatccccaggtctgacactggc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477252 35 + 115148730 ccctggccctgtcaatccccaggccccggactggc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296119 35 - 75399963 acctggccctgtgttggtcctggcctggccctggc i chlSab2.chr5 I 5 I 28 s manLeu1.NW_012099899v1 74468 24 + 473220 acctgtccctgcg-----------ctggtcctggc i manLeu1.NW_012099899v1 I 6 I 54 s colAng1.NW_012115910v1 6732550 35 - 6934359 ccctggccctgacaatgcccaggccccacactggc i colAng1.NW_012115910v1 I 51 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 20127 0 - 56717 C a score=48221.000000 s hg38.chr14_KI270725v1_random 31745 60 + 172810 catg-cttggccctggcccctccttttggccctgccc---------------------------tgtccctg------------------------ccttggccctgtgcta s panTro5.chrY 290464 83 + 26350515 CATG-CTTGGCCCTGGCCCCTCCTTT-GGCCCTGCCT---------------------------TGGCCCTGTGCTATCTTAGTACAGGGCCTTGGCCTTGGCCCTATGCTA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8180 60 - 112215 catg-cttggccctggcccctccttttggccctgccc---------------------------tggccctg------------------------ccttagccctgtgcta i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477287 59 + 115148730 catg-ctcggccctggcccctccttt-ggcactgccc---------------------------tggccctg------------------------ccttggccctgtgcta i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296182 86 - 75399963 catgccttggccttggcccctcctt--agtcctgccctgggcctgtgctctcttattcttcctctgaccctt------------------------ccttggtcctgtgcta i chlSab2.chr5 I 28 C 0 s colAng1.NW_012115910v1 6732585 49 - 6934359 catgccttgaccctggcccctcctt---------------------------------------tggccctg------------------------ccctggccctgtgcta i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 20127 0 - 56717 C e manLeu1.NW_012099899v1 74492 54 + 473220 I a score=194760.000000 s hg38.chr14_KI270725v1_random 31805 122 + 172810 tcttagtcctgccctggccctgaact----cgccctggccctaccctcaccctacactggccccgccctaccctggccttgccctgccctggccctgcctttggcctgctgtggctctggttctgc s panTro5.chrY 290547 122 + 26350515 TCTTAGTCCTACCCTGGCCCTGAACT----CACCCTGGCCCTAACCTCACCCTACACTGGCCCTGCCCTACCCTGGTGTTGCCCTGCCCTGGACCTGCCTTTGGCCTTCCCTGGCTCTGGTTCTGC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8240 122 - 112215 tcttagtcctgccctggccctgaact----cgccctggccctaccctcaccctacactggccccgccctaccctggccttgccctgccctggccctgcctttggcctgctctggctctggttctgc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477346 122 + 115148730 tcttagtcctgccctggccctgaact----cgccctggccctaccctcaccctacactgaccctgccctaccctggccttgccctgccctggccctgcctttggcctgccctggctctggttctgc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296268 105 - 75399963 tcttagttc---------------------tgccctggccctgccctcaccctcccctggccctaccctaccctggccctgccctgccttggccctgcctttggcctgccctggctctggttctgc i chlSab2.chr5 C 0 I 10 s manLeu1.NW_012099899v1 74546 126 + 473220 ccttggtcctgccctggccctgtggtatcttgccctggccctgccctcacccttccctggacctgccctcccctggccttgccctgccctggccctgcctttggcctgccctggctctggttctgc i manLeu1.NW_012099899v1 I 54 I 10 s colAng1.NW_012115910v1 6732634 122 - 6934359 tcttagtcctgccctggccctgaact----caccctggccctaccctccccctactctggccctgccttaccctggccttgccctgccatgaccttgcctttggcatgccctggctctggttctgc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 20127 0 - 56717 C a score=6345.000000 s hg38.chr14_KI270725v1_random 31927 3 + 172810 cct s panTro5.chrY 290669 3 + 26350515 CCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8362 3 - 112215 cct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477468 3 + 115148730 cct i nomLeu3.chr7b C 0 C 0 s papAnu3.chrUn_NW_003942124v1 20127 3 - 56717 ccc i papAnu3.chrUn_NW_003942124v1 C 0 I 61 s chlSab2.chr5 43296383 3 - 75399963 ccc i chlSab2.chr5 I 10 I 7 s manLeu1.NW_012099899v1 74682 3 + 473220 ccc i manLeu1.NW_012099899v1 I 10 I 7 s colAng1.NW_012115910v1 6732756 3 - 6934359 cct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I a score=87079.000000 s hg38.chr14_KI270725v1_random 31930 61 + 172810 ggccttgcccttgccctggactctccctg-------------------------------------------------------gccatgttttttccatggtccttctctggcct s panTro5.chrY 290672 61 + 26350515 GGCCTTGCCCTTGCCCTGAACCCTCCCTG-------------------------------------------------------GCCATGTTTTTACCATGGTCCTTCTCTGGCCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8365 61 - 112215 ggccttgcccttgccctggaccctccctg-------------------------------------------------------gccatgttttgtccatggtccttctctggcct i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477471 61 + 115148730 ggccttgcccttgccctggaccctccttg-------------------------------------------------------gccatgtttactccgtggtccttctctggcct i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296393 61 - 75399963 ggccctgcccttgccctggtccctccctg-------------------------------------------------------gtcatgcttttttcctggtccttctgtggcct i chlSab2.chr5 I 7 C 0 s manLeu1.NW_012099899v1 74692 61 + 473220 ggctctgcccttgccctggtacctccctg-------------------------------------------------------gccatgctttttgtctaggtcttctctggcct i manLeu1.NW_012099899v1 I 7 C 0 s colAng1.NW_012115910v1 6732759 116 - 6934359 ggccctgcccttgccctggaccctccctggtcatgtttttccctggtccttctttggccctttcgttgccctggaccttccctagccatgttttttccctggtccttctctggcct i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I e papAnu3.chrUn_NW_003942124v1 20130 61 - 56717 I a score=2548.000000 s hg38.chr14_KI270725v1_random 31991 1 + 172810 t s panTro5.chrY 290733 1 + 26350515 T i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8426 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477532 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s papAnu3.chrUn_NW_003942124v1 20191 1 - 56717 t i papAnu3.chrUn_NW_003942124v1 I 61 N 0 s chlSab2.chr5 43296454 1 - 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012099899v1 74753 1 + 473220 t i manLeu1.NW_012099899v1 C 0 C 0 s colAng1.NW_012115910v1 6732875 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I a score=297152.000000 s hg38.chr14_KI270725v1_random 31992 176 + 172810 gcccttgccctgtcctctttctggtcctgccatgtttctggccctgccctgtccatgtcctggacctgactctggccctggatctccctgtccctgccctgccataccctggcctgttccttgctctacactgaccctgccctgccttggccctgtgctaccctagctctgccctg s panTro5.chrY 290734 176 + 26350515 GCCCTTGCCCTGTCCCCTTTCTGGTCCTGCCATGTTTCTGGCCCTGCCCTGTCCATGTCCTGGACCTGACTCTGGCCCTGGACCTCCCTGTCCCTGCCCTGCCATACCCTGGCCTGTTCCTTGCTCTACACTAACCCTGCCCTGTCTTGGCCCTGTGCTACCCTAGCCCTGCCCTG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8427 176 - 112215 gcccttgccctgtcccctttctggtcctgccatgtttctggccctgccctgtccatgtcctggacctgactctggccctggacctccctgtccctgccctgccataccctggcccattccttgctctacactgaccctgccctgccttggccctgtgctaccctagccctgccctg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477533 175 + 115148730 gcccttgccctgtcccctttctggtcctgccatgtttctggacctgccctgtccatgccctggacctggctctggccctggacct-cctgtccctgccctgccataccctggccggttccttgctctacactgaccctgccctgccttggccctgtgctaccctagccctgccctg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr5 43296455 171 - 75399963 gcccttgccctggcccctttctggtcctgtcatgtttctgaccctgcaccgtccatgtcctggaacttgctctggctctggacttccctgtcccagccctgccacacctgggcctagtccttgctctaca-----cttgccttgccttggccctgtgctaccctagccctgccctg i chlSab2.chr5 C 0 N 0 s manLeu1.NW_012099899v1 74754 176 + 473220 gcccttgccctggcccctttctggtcctgacatatttctggccctgtcctgtccatgtcctggacctggctctggccctgaacttccctgtccctgccctgccacaccctggcctagtccttgctctacactggccttgccctgccttggccctgtgctaccctagccctgccctg i manLeu1.NW_012099899v1 C 0 N 0 s colAng1.NW_012115910v1 6732876 175 - 6934359 gcccttgccctggcccctttctgatcctgccgtgtttctgg-cctgccctgtccatgtcccagacctgactctggccctggacttacctgtccctgacctgccataccctgacccattccttgctctacactgaacctggcctgccttggccctgcgctacgctaacccttctctg i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I a score=129984.000000 s hg38.chr14_KI270725v1_random 32168 174 + 172810 accttctgctgaccctgatcctgccatggccctggccctgccatgtccctgtcctggccctggttctgcgctgcttctggccctagccttagtcctctcatgtccctggctgtgaccctgcccctggtttttctctggccatgaccctgccccagttctgtcctatacctggcc s panTro5.chrY 290910 173 + 26350515 TCCTTCTGCTGGCCCTGATCCTGCCATGACCCAAGCCCTGCCATGTCCCTCCCCTGGCCCTGGTTCTGCCCTACTTCTGGGC-TGGCCTTGGTCCTCTCATGTCCCTGGCTGTGACCCTGCCCCTGGTTTTTCTCTGGCCATGACCCTGCCCCGGTTCTGTCCTATCCCTGGCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8603 172 - 112215 gccttctgctgaccctgatcctgccatggccctggccctgccatgtccctgccctggccctggttcttccctgcttctggccctggccttggtcctctcatgtccctggctgtgaccctg-ccctggtttttctctggccatgaccctgccccagttctgtcctat-cctggcc i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477708 173 + 115148730 gccgtttcctggccctgat-ctgccatggcccttgccctgccatggccccgccctggccctggttctgccctgcttctggccctggccttggtccggtcatgtccctggctgtgaccctgcccctggtttttctctggccatgaccctgccccagttctgtcatatccctggcc i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6733051 174 - 6934359 accctctgctggccctggtcctgccatgggcctggccctgccatgtccctgtcccggccctggttccgccctgctttgggccctggccttggtcctgacttgtccctggctgcgaccctgccccttgttttaatttggccgtgaccctgcccccgttctgtcctagtcctggcc i colAng1.NW_012115910v1 C 0 C 0 e ponAbe2.chr2a_random 9001754 1125 + 13868332 I a score=19445.000000 s hg38.chr14_KI270725v1_random 32342 14 + 172810 ctgtctcagttctg s panTro5.chrY 291083 14 + 26350515 CTGTCTCAGTTCTG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8775 14 - 112215 ctgtctcagttctg i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9002879 14 + 13868332 ctgtctcagttctg i ponAbe2.chr2a_random I 1125 C 0 s nomLeu3.chr7b 114477881 14 + 115148730 ctgtctcagttctg i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012115910v1 6733225 14 - 6934359 ctgtcccagttctg i colAng1.NW_012115910v1 C 0 N 0 a score=13116.000000 s hg38.chr14_KI270725v1_random 32356 14 + 172810 tcctagccctggcc s panTro5.chrY 291097 14 + 26350515 TCCTAGCTCTGGCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8789 14 - 112215 tcctagccctggcc i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9002893 14 + 13868332 tcctagccctggcc i ponAbe2.chr2a_random C 0 I 1207 s nomLeu3.chr7b 114477895 14 + 115148730 tcctagccctggcc i nomLeu3.chr7b C 0 C 0 a score=544479.000000 s hg38.chr14_KI270725v1_random 32370 1219 + 172810 tTTCACAGTACTTTATGCCTAGTAAGGGCTCCATGGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAAGAAAAAAA-CGAAATATTTT-GATAAGAAGTTAAAGCTTTGTATATAATATGCCTTGAATTGTAAGT---------------------------GCCTGTTATTAGTTGTATTACATATAGGTCATGGTTTTGTACACATAACTCCAAACCATTGATACTGTTAAAAGAATATATGAATATATGAAAGAATGTGTAAACGTAAGAATGTATCAGTATCTAATGACCTTTCCAAATTAATTTTTATTTTTAGCTCTATTAGATTTTTCTCAGTGTAACAAATGTTTATTCCTATGTAATTAAGGGCGTATTTCCTGTCCAGAATATTCATATTACCTAATTGAAAATTATATGATACAAAAATATAATACTATTTTTAggccaggcatggtggctcatacctgtaatcccaacattttgagaggccaagtttggagaatcatttgagtccaggagttgaccagcctgggcaacatagtgagaccttgtctttattaaataaata--------------------------------------------aataaaTAAATAggttgggcactgtggctcatatctgtcatcccagcattttgggttgccaatgcaggaggattgcttgagcccaggagtttgagaccagcctgggcagaatagcaagactccatctctacaaataataaaatattaaccaggtgtggtggtgcacacctggggtcccagctacctgggaggctaagatgggaggtttgctcgaggttgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctataaataaagaaataagtaaaaatataaataaaaataagtaaaaataaatataagtaaatataaatataaatacatataaatataaaaatgcatacatgaaaagaaacaatTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATCACATCATTTCACTTAGatgaaatgataagatgacttgagatgagatgaaatgatgagatgaaatgacaaaatgatgagatgagatgagaagatgagatgaaattttgagatgaaatggtgagtagaaatgatgagatgaaattatgagacgaaatgacaaaattgaaaagaaattgaaaggagatgagatgagttaaaatgagatgaaatgatgagat s panTro5.chrY 291111 1151 + 26350515 TTTCACAGTACTTTATGCTTAGTAAGGGCTCCATAGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAAGAAAAAAAACAAAATCTTTTTGATGAGAAGTTAAAGCTTTGTATATAATATGCCTTGAATTGTAAGT---------------------------GC---TTATTAGTTGTATTACATATAGGTCATGGTTTTGTACACGTAACTCCAAACCATTGATACAGTTAAAAGAATATATGAATATATGAAAGAATGTATAAACGTAAGAATGTATGAGTATCTAATGACTTCTCCAAATTAATTTTTATTTTTAGCTCTATTAGATTTTTCTCAGTGTAACAAATGTTTATTCCTATGTAATTAAGGGCATATTTCCTTTACAGAATATTCATATTACCGAATTGAAAATTATATAATGCAAAAATATAATACTATTTTTAggccaggctttgtggctcatacctgtaatcccaaccttttgagaggccaagtttgaagaatcatttgagtccaggagttgaccagcctgggcaacatagtgagaccttttctttat--------ta--------------------------------------------aataaataaaTAggttgggcactgtggctcatatctgtaatcccagcattttgggttgccaaggcaggaggattgcttgaacccaggagtttgagaccagcctgggcagcataccaagactccatctctacaaataataaaatattaacaaggtgtggtggtgcacacctggagtcccagatacctgggaggctaaggtaggaggtttcctcgaggttgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctctaaat----aaataagtaaaaaTATAATTAAAAATAAGTAAAAAGAAATATAAGTAAATATAAATATAAATACATATAAATATAAAAATGAATACATGAAAACAAACAATTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATTACATCATTTCACTTAGatgaaatgataagatgacttgagatgagatgaaat---------------------------------------gatgagacgaaattttgagatgaaatggtgagtagaaatgatgagatgaa---atgagacaaaatgacaaaattgaaaagaaattgaaaggagatgag----------atgagatgaa---atgagat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 8803 1211 - 112215 TTTCACAGTACTTTATGCTTAGTAAGGGCTCCATGGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAAGAAAAAAA-CAAAATATTTT-GATAAGAAGTTAAAGCTTTGTATATAATATGCCTTGAATTGTAAGT---------------------------GCCTGTTATTAGTTGTATTACTTATGGGTCATGGTTTTGTACACATAACTCCAAACCATTGATACTGTTAAAAGGATATATGAATATATGAAAGAATGTATAAACGTAAGAATGTATCAGTATCTAATGACCTTTCCAAATTAATTTTTAATTTTAGCTCTATTAGATTTTTCTCAGTGTAACAAATGTTTATTCCTATGTAATTAAGGGCGTATTTCCTGTACAGAATATTCATATTACCTAATTGAAaattatatgatacaaaaatataatactatttttaggccaggcatggtggctcatacctgtaatcccaacattttgagaggccaagtttggagaatcatttgagtccaggagttgaccagcctgggcaacatagtgagaccttgtctttattaaataaataaat-----------------------------------------aataaataaataggttgggcactgtggctcatatctgtcatcccagcattttgggttgccaatgcaggaggattgcttgagcccaggagtttgagaccagcctgggcagaatagcaagactccatctctgcaaataataaaatattaaccaggtgtggtggtgcgcacctggggtcccagctacctgggaggctaaggtgggaggtttgctcgaggctgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctataaataaagaaataagtaaaaatataaataaaaataagtaaaaataaatataagtaaatataaatataaatacatataaatataaaaatgcatacatgaaAAGAAACAATTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTCATGATTCCATTACATCATTTCACTTagatgaa---ataagatgacttgagatgagatgaaatgatgagatgaaatgatgaaatgatgagatgagat-----gatgagatgaaattttgagatgaaatggtgagtagaaatgatgagatgaaatgatgagatgaaatgacaaaattgaaaagaaattgaaaggagatgagatgagataaaatgagatgaa---atgagat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114477909 1181 + 115148730 tTTCACAGTACTTTATGCTTAGTAAGGGCTCCATAGTGTCTGTGAGTTGAATGTTGTGTTCATAGTATCTGCCAAAACAGAAAGAAAAAAAACAAAATCTGAT-AATGAGAAGTTAAAGCTTTGTATATAATATTCCTTGAATTGTAATtattagttgtattacttatcagttattagcctgtcattagttgtattaCATATAGTTCCTGGTTTTGTACACATAATTTCAAACCATTGATACTGTTAAAAGAATATATGAATATATGAAAGAATGTGTAAACATAAGAATGTAGGAGTATTTAACGACCTTTCCAAATTAATTTTT-CTTTTAGCTCTATTAGATTTTTCTCAGTGTAAAAAATGTTTATGCCTATGTAATTAAGGGCATATGTCCTGTACAGAATATTCATATTACCTAATTGAAAATTATATAACACAAACATATAATACTATTTTTAggccaggcatcgtggctcatacctgtaatcccaacattttgagaggctacgtttggagaatcattaga---------------------ggcaacatagtgagaccttgtctttaTtaaataaataaataaataaataaataaataaataaataaataaataaataaataaataaataaataggttgggcactgtggctcatgtctgtaatccca--------------------------attgcttgagcccaggagtttgagaccagcctgggcagcatagcaagcctccatctctacaaataataaa---------aggtgtggtggtgtgcacctggggtcccagctacctggaaggctgaggtggcaggtttgctcgaggctgcagtgaactgtgaatgcaccactgcattccagcctaggccacagaacaggaccttgtctataaataaagaaataagtaaaaatataaataaaaataagtaaaatgaaatataag------taaatataaatacatataaatataaaaatgaatacatgaaaacaaacaatTTTTAAATTTAACATCACTGAGGGCATCCTATCCATTTCATTTGATGATTCCATTACATCATTTCAGTTAGatgaaatgatcagatgacttgatatgagatgaaatgatgagatgaaatgatgaaatgatgagatga--------gatgagatgaagttttgagatgaaatg--------------------------gtgagacgaaatgacaaatttgaaaagaaattgaaaggagatgaa----------atgagatgaa---atgagat i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9002907 1207 + 13868332 I a score=3820.000000 s hg38.chr14_KI270725v1_random 33589 4 + 172810 gatg s panTro5.chrY 292262 4 + 26350515 gatg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10014 4 - 112215 gatg i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004114 4 + 13868332 gatg i ponAbe2.chr2a_random I 1207 I 216 s nomLeu3.chr7b 114479090 4 + 115148730 gatg i nomLeu3.chr7b C 0 C 0 a score=75440.000000 s hg38.chr14_KI270725v1_random 33593 193 + 172810 gatgaaatgatgagataaaacgagccatgaaatga----------tgagatgaaatgaaatgaaat-----aatgaaatgatatgaaataatgaaattgaaatgagatgagatgagatga---aatgagataaaatgatgagatgaaatgagatg-------------aatgatg------------------agatgaaatgatgagatg----------------aaatgagatgaaaaat---------gatgagacgaaaaat s panTro5.chrY 292266 240 + 26350515 gatgaaatgatgagatgaaacgag--atgaaatgataagaaatgttgagatgaaatgaaatgaaataatgaaatgaaatgatatgaaataatgaaattgaaatgaggtgagatgagatgatataatgagataaaatgatgagatgaaataagatgaacaataagatgaaatgatgaaataagatgagacgataagatgaaatgatgagatg----------------aaatgagatgaaaaat---------gatgagaagaaaaat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10018 196 - 112215 gatgaaatgatgagatgaaacgag--atgaaatga----------tgagatgaaatgaaatgaaat-----aatgaaatgatatgaaataatgaaattgaaatgagatgagatgagatgaaataatgagataaaatgatgagatgaaatgagatg-------------aacgatg------------------agatgaaatgacgagatg----------------aaatgagatgaaaaatga-------gatgaaatgaaaaat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479094 241 + 115148730 gatgaaatgatgaaatg--atgag--atgaaatga----------tgagatgaaatgaaatgaagt-----aatgaaatgatatgaaataatgaaacgaaattgaaatgagatgaaat-----aatgagttaaaatgatgagatgaaatgaaatgaatgatgagatgaaatgatgagatgagatgagatgataagaggaaatgatgagatgaaatgatgatgagatgaaatgagatgaaaaatggatgaaatgatgagatgaaat-- i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004118 216 + 13868332 I a score=5209.000000 s hg38.chr14_KI270725v1_random 33786 8 + 172810 gagattaa s panTro5.chrY 292506 8 + 26350515 aagatgaa i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10214 8 - 112215 gaaattaa i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004334 8 + 13868332 gagatgaa i ponAbe2.chr2a_random I 216 I 26 s nomLeu3.chr7b 114479335 8 + 115148730 gagatgaa i nomLeu3.chr7b C 0 C 0 a score=936.000000 s hg38.chr14_KI270725v1_random 33794 9 + 172810 atgaaatga---------------------------- s panTro5.chrY 292514 9 + 26350515 atgagatga---------------------------- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10222 9 - 112215 atgaaatga---------------------------- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479343 37 + 115148730 atgaaatgaagtagtgatatgaggtgaaattaaatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004342 26 + 13868332 I a score=2730.000000 s hg38.chr14_KI270725v1_random 33803 3 + 172810 aat s panTro5.chrY 292523 3 + 26350515 aat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10231 3 - 112215 aat i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004368 3 + 13868332 aat i ponAbe2.chr2a_random I 26 I 119 s nomLeu3.chr7b 114479380 3 + 115148730 aat i nomLeu3.chr7b C 0 C 0 a score=34055.000000 s hg38.chr14_KI270725v1_random 33806 107 + 172810 aatgaaaggaaattatgaaatgtaatgatgaaattgaaatgaaat--tgaaatgagatg----agttgaaat--gatgagatgtaatgatgaaatgaaat--gatgaaatgagatga s panTro5.chrY 292526 111 + 26350515 aatgaaatgag---atgaaatgaaataa-aacaatgaaaggaaattatgaaatgtaatgatgaaattgaaatgagatgagatgaaatgatgagatgaaat--gatgaaatgagatga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10234 107 - 112215 aaggaaaggaaattatgaaatttaatgatgaaattgaaatgaaat--tgaaatgagatg----agttgaaat--gatgagatgtaatgatgaaatgaaat--gatgaaatgagatga i gorGor5.CYUI01000689v1 C 0 I 9 s nomLeu3.chr7b 114479383 93 + 115148730 aatgaaaggaaattatgaaatgtaatgc-----------tgaaat--tgaaataagatg---------aaat--gatgagatgaaatgatgaaatgagatgagatgaaatgagatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004371 119 + 13868332 I a score=1638.000000 s hg38.chr14_KI270725v1_random 33913 3 + 172810 aat s gorGor5.CYUI01000689v1 10350 3 - 112215 aat i gorGor5.CYUI01000689v1 I 9 C 0 s ponAbe2.chr2a_random 9004490 3 + 13868332 aat i ponAbe2.chr2a_random I 119 I 8 s nomLeu3.chr7b 114479476 3 + 115148730 aat i nomLeu3.chr7b C 0 C 0 e panTro5.chrY 292637 0 + 26350515 C a score=2146.000000 s hg38.chr14_KI270725v1_random 33916 8 + 172810 aatgggat s panTro5.chrY 292637 3 + 26350515 -----gat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10353 8 - 112215 aatgagat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479479 8 + 115148730 gatgagat i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004493 8 + 13868332 I a score=1910.000000 s hg38.chr14_KI270725v1_random 33924 2 + 172810 ga s panTro5.chrY 292640 2 + 26350515 ga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10361 2 - 112215 ga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004501 2 + 13868332 ga i ponAbe2.chr2a_random I 8 I 10 s nomLeu3.chr7b 114479487 2 + 115148730 ga i nomLeu3.chr7b C 0 C 0 a score=5491.000000 s hg38.chr14_KI270725v1_random 33926 15 + 172810 aatgagataatgaga s panTro5.chrY 292642 15 + 26350515 aatgaggtgaaatga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10363 15 - 112215 aatgagataatgaga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479489 15 + 115148730 aatgaaatgatgaga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004503 10 + 13868332 I a score=2332.000000 s hg38.chr14_KI270725v1_random 33941 3 + 172810 tga s panTro5.chrY 292657 3 + 26350515 tga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10378 3 - 112215 tga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004513 3 + 13868332 tgg i ponAbe2.chr2a_random I 10 I 27 s nomLeu3.chr7b 114479504 3 + 115148730 tga i nomLeu3.chr7b C 0 C 0 a score=5254.000000 s hg38.chr14_KI270725v1_random 33944 25 + 172810 gatgaa-----atcatgagatgaaatgatg s panTro5.chrY 292660 22 + 26350515 gatgag--------atgagatgaaatgatg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10381 27 - 112215 gatgagatgaaatcatgagatgaa---atg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479507 19 + 115148730 aatgaa--------atgagatgag---atg i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004516 27 + 13868332 I a score=1332.000000 s hg38.chr14_KI270725v1_random 33969 2 + 172810 aa s panTro5.chrY 292682 2 + 26350515 ag i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10408 2 - 112215 aa i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004543 2 + 13868332 aa i ponAbe2.chr2a_random I 27 I 88 s nomLeu3.chr7b 114479526 2 + 115148730 aa i nomLeu3.chr7b C 0 C 0 a score=32170.000000 s hg38.chr14_KI270725v1_random 33971 80 + 172810 atgaaatgatgtatgaaatgatgagatgaaatgagatgaaatgtaatgagatgaaatgaaatgacataatgaaatgaaat s panTro5.chrY 292684 70 + 26350515 atgaaatga----------aatgagatgaaatgagatgtaatgaaatgagatgaaatgaaatgacataatgaaatgcaat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10410 80 - 112215 atgaaatgatggatgaaatgatgagatgaaatgagatgaaatgtaatgagatgaaatgaaatgacataatgaaatgaaat i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479528 70 + 115148730 atgaaatga----------tacgaaatgaaatgagatgaaatgtaatgagatgaaataaaatgacacaatgcaatgaaat i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004545 88 + 13868332 I a score=11200.000000 s hg38.chr14_KI270725v1_random 34051 18 + 172810 aatgaaatgaaatgaa--at----- s panTro5.chrY 292754 18 + 26350515 aatgaaacgagatgaa--at----- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10490 20 - 112215 aatgaaatgagatgaaacat----- i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004633 18 + 13868332 aatgaaatgagatgaa--at----- i ponAbe2.chr2a_random I 88 I 92 s nomLeu3.chr7b 114479598 23 + 115148730 aatgaaatgagatgaa--gtgaaat i nomLeu3.chr7b C 0 C 0 a score=5022.000000 s hg38.chr14_KI270725v1_random 34069 9 + 172810 aatgaaatg s panTro5.chrY 292772 9 + 26350515 aatgaaatg i panTro5.chrY C 0 I 24 s gorGor5.CYUI01000689v1 10510 9 - 112215 aatgaaatg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479621 9 + 115148730 aatgaaatg i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004651 92 + 13868332 I a score=4780.000000 s hg38.chr14_KI270725v1_random 34078 19 + 172810 atgaagtaatgaaatgaaa s gorGor5.CYUI01000689v1 10519 19 - 112215 atgaaataatgaaatgaaa i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479630 19 + 115148730 atgaaataatgaaatggaa i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004651 92 + 13868332 I e panTro5.chrY 292781 24 + 26350515 I a score=19676.000000 s hg38.chr14_KI270725v1_random 34097 46 + 172810 atgaaatggaaatgatgagatgagaag----------aaatgatgagatgaaatga s panTro5.chrY 292805 55 + 26350515 atgagat-gaaatgatgagatgagatgaattgagactaaatgatgagattaaatga i panTro5.chrY I 24 C 0 s gorGor5.CYUI01000689v1 10538 46 - 112215 atgaaatggaaatgatgagatgagaag----------aaatgatgagatgaaatga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479649 46 + 115148730 atgaaatggaaatgatgagatgagatg----------aaattatgagatgaaatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004651 92 + 13868332 I a score=910.000000 s hg38.chr14_KI270725v1_random 34143 1 + 172810 t s panTro5.chrY 292860 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10584 1 - 112215 t i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9004743 1 + 13868332 t i ponAbe2.chr2a_random I 92 I 121 s nomLeu3.chr7b 114479695 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 a score=22258.000000 s hg38.chr14_KI270725v1_random 34144 77 + 172810 gagatga-----gataaaatgagatgaaatg------------------------------------atgagatgaaatgaaatg--------------------atgagatgagatgaaatatgatgagatgaaatg s panTro5.chrY 292861 138 + 26350515 gagatgagatgtgatgaaatgagatgaaatgatgacatgatatgatgacaagaaatcagatgaaataatgagatgaaatgagatgaaataatgagatgagttgaaatgagatgagataaaatgtgatgagatgaaatg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10585 67 - 112215 gagatga-----gataaaatgagatgaaatg------------------------------------atgagatgaaat------------------------------gatgagatgaaatatgatgagatgaaatg i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479696 80 + 115148730 -----ga-----aatgaaatgagatgaaatg------------------------------------atgagatgaaatgagattaaatgatggg----------atgagatgtgatgaaa--tgatgagatgaaatg i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9004744 121 + 13868332 I a score=22318.000000 s hg38.chr14_KI270725v1_random 34221 91 + 172810 acataatg---------aatgaaatgatgaaatggaataatgaaacggaaatgatgagatgagatgcaatgagttga---aatgagatgaaatgatgaaatga s panTro5.chrY 292999 103 + 26350515 acataatgaaatgaaataatgaaatgatgaaatggaataatgaaatggaaatgatgagatgagatgcaatgagttgagatgatgagatgaaattatgaaatga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000689v1 10652 91 - 112215 acataatg---------aatgaaatgatgaaatggaataatgaaacggaaatgatgagatgagatgcaatgagttga---aatgagatgaaatgatgaaatga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9004744 121 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=11494.000000 s hg38.chr14_KI270725v1_random 34312 177 + 172810 tgagatgaaatgatatgagatgtgatgaaatgatgacatgaaatgatgacataaaatgagatgaaatgagatgtaatgatggaatgagatgagatgaaatgagatgaaatgatgaggtgagataaaataa-----tgatatgaaatgatgagatg-aatgacgagatgaaa---tgagatgaatga s panTro5.chrY 293102 183 + 26350515 aaagatgagatgagatgagatgtgatgaaatgatgacatgaa---atgacataaaatgagattaaataagatgtaatgatgaaatgagatcagatgaaatgagttgaaatgatgagatgagatgaaatgaaatggtgagataaaatgatgatatgaaatgatgatatgaaatggtgagatgaatga i panTro5.chrY C 0 C 0 e ponAbe2.chr2a_random 9004744 121 + 13868332 I e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=846.000000 s hg38.chr14_KI270725v1_random 34489 3 + 172810 tga s panTro5.chrY 293285 3 + 26350515 tga i panTro5.chrY C 0 C 0 s ponAbe2.chrUn 70669604 3 - 72422247 tga i ponAbe2.chrUn n 121 n 121 e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=-31.000000 s hg38.chr14_KI270725v1_random 34492 1 + 172810 a s panTro5.chrY 293288 1 + 26350515 g i panTro5.chrY C 0 C 0 e ponAbe2.chrUn 70669607 121 - 72422247 I e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=13704.000000 s hg38.chr14_KI270725v1_random 34493 66 + 172810 atgaaatgatg-----agatgagatgatgagatgaaatgatgagatgagataaaatgagatgaaatgatga s panTro5.chrY 293289 71 + 26350515 atgaaatgatgagacaagatgagatgatgagatgaaatgatgagatgaaatgaaatgaaatgaaataatga i panTro5.chrY C 0 I 521 s ponAbe2.chr2a_random 9004865 64 + 13868332 atgaaataatg-----agatgaaatgacgagatgaaatgacgagatgaaatg--atgagatgatatgatga i ponAbe2.chr2a_random I 121 C 0 e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=19540.000000 s hg38.chr14_KI270725v1_random 34559 95 + 172810 gatgaaatgaaatgatgagatgagatgaaatatgatgagatgaaatgacataatgaa--------------tgaaatgatgaaatggaataatgaaacggaaatg--atga s panTro5.chr22 3799735 106 + 37823149 gatgagatgaaatga---gatgagatgaaatgtgatgagatgaaatgatataatgaaatgaaataatgaaatgaaatgatgaaatggaataatgaaatggaaatg--atga i panTro5.chr22 n 521 C 0 s ponAbe2.chr2a_random 9004929 95 + 13868332 gatgagatgaaatga--------gatgaaatgtgatgagatgaaatgacataatgaa--------atgaaatgaaatgatgaaatggaataatgaaatggaaatgaaatgg i ponAbe2.chr2a_random C 0 I 43 e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=3384.000000 s hg38.chr14_KI270725v1_random 34654 36 + 172810 gatgagatgcaatgagttgaaatgagatgaaatgat s panTro5.chr22 3799841 36 + 37823149 gatgagatgcaatgagttgaaatgagatgaaatgat i panTro5.chr22 C 0 C 0 e ponAbe2.chr2a_random 9005024 43 + 13868332 I e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=174.000000 s hg38.chr14_KI270725v1_random 34690 3 + 172810 gaa s panTro5.chr22 3799877 3 + 37823149 gtg i panTro5.chr22 C 0 C 0 s ponAbe2.chr2a_random 9005067 3 + 13868332 gaa i ponAbe2.chr2a_random I 43 I 27 e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=410.000000 s hg38.chr14_KI270725v1_random 34693 8 + 172810 atgatgag s panTro5.chr22 3799880 8 + 37823149 atgaaaag i panTro5.chr22 C 0 C 0 e ponAbe2.chr2a_random 9005070 27 + 13868332 I e gorGor5.CYUI01000689v1 10743 0 - 112215 C e nomLeu3.chr7b 114479776 0 + 115148730 C a score=2412.000000 s hg38.chr14_KI270725v1_random 34701 11 + 172810 atgaaatgata s panTro5.chr22 3799888 11 + 37823149 atgagatgaga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10743 11 - 112215 atgaaatgaga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005070 27 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=3618.000000 s hg38.chr14_KI270725v1_random 34712 7 + 172810 tgagatg s panTro5.chr22 3799899 7 + 37823149 tgagatg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10754 7 - 112215 tgagatg i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005097 7 + 13868332 cgagatg i ponAbe2.chr2a_random I 27 I 45 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=9741.000000 s hg38.chr14_KI270725v1_random 34719 45 + 172810 tgatgaaatgatgacatgaaatgatgacataaaatgagatgaaat s panTro5.chr22 3799906 42 + 37823149 tgatgaaatgatgacatgaaatga---cataaaatgagatgaaat i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10761 41 - 112215 tgatg-aatgatgacatgaaatga---cataaaatgagatgaaat i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005104 45 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=613.000000 s hg38.chr14_KI270725v1_random 34764 2 + 172810 ga s panTro5.chr22 3799948 2 + 37823149 aa i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10802 2 - 112215 ga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005149 2 + 13868332 aa i ponAbe2.chr2a_random I 45 I 89 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=18911.000000 s hg38.chr14_KI270725v1_random 34766 82 + 172810 gatgtaatgatggaatgagatgagatgaaatgagatgaaatgatgag-------------gtgagataaaataatgatatgaaatgatgagatga s panTro5.chr22 3799950 95 + 37823149 gatgtaatgatgaaatgagatgagatgaaatgagatgaaatgatgagatgagatgaaatggtgagataaaatgatgatatgaaatgatgagatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10804 78 - 112215 gatgtaatgatggaatgagatgagatgaaatgagatgaaatgatga--------------gtgagataaa---atgatatgaaatgatgagatga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005151 89 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=1002.000000 s hg38.chr14_KI270725v1_random 34848 2 + 172810 -at s panTro5.chr22 3800045 2 + 37823149 -at i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10882 2 - 112215 -at i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005240 3 + 13868332 aat i ponAbe2.chr2a_random I 89 I 53 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=7167.000000 s hg38.chr14_KI270725v1_random 34850 50 + 172810 gatgagatgaaatg---agatgaa-tgatgaaatgaaatgatgagatgagatga s panTro5.chr22 3800047 54 + 37823149 gatgagatgagatggtgagatgaaatgatgagatgaactgatgagatgaaatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10884 42 - 112215 gatgagatgaaatgat-gaatgaa-tgatgaaat----------gatgagatga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005243 53 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=2838.000000 s hg38.chr14_KI270725v1_random 34900 5 + 172810 gatga s panTro5.chr22 3800101 5 + 37823149 gatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10926 5 - 112215 gatga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005296 5 + 13868332 gatga i ponAbe2.chr2a_random I 53 I 42 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=4311.000000 s hg38.chr14_KI270725v1_random 34905 29 + 172810 --tgagatgaaatga--tgagat---gaactgatga s panTro5.chr22 3800106 36 + 37823149 actgagatgaaatgaaatgaaataatgaaataatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10931 28 - 112215 --tgaaatgaaatg---tgagat---gaactgatga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005301 42 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=1692.000000 s hg38.chr14_KI270725v1_random 34934 3 + 172810 gat s panTro5.chr22 3800142 3 + 37823149 gat i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10959 3 - 112215 gat i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005343 3 + 13868332 gat i ponAbe2.chr2a_random I 42 I 62 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=13403.000000 s hg38.chr14_KI270725v1_random 34937 62 + 172810 gaaatgaaat----------aatgaaatgaaattgaaataaaattgaaatgagatgagatgaaatgataaga s panTro5.chr22 3800145 67 + 37823149 taaatgaaatgaaataatgaaatgaaatgaaattgaaataaaattgaaatgagatga-----aatgataaga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 10962 62 - 112215 gaaatgaaat----------aatgaaatgaaattgaaataaaattgaaatgagatgagatgaaatgataaga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005346 62 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=1546.000000 s hg38.chr14_KI270725v1_random 34999 5 + 172810 tgaga s panTro5.chr22 3800212 5 + 37823149 tgaaa i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11024 5 - 112215 tgaga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005408 5 + 13868332 caaaa i ponAbe2.chr2a_random I 62 I 60 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=10953.000000 s hg38.chr14_KI270725v1_random 35004 55 + 172810 tgatgaaataaaatgatgaaatgatgagatgtgatgagatgaaatgatga--------gatga s panTro5.chr22 3800217 49 + 37823149 tgatgaaataaaatga------aatgagatgtgatgagatgaaatgatga--------gatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11029 60 - 112215 tgatgaaataaaatgatga---aatgagatgtgatgagatgaaatgatgagatgaaatgatga i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005413 60 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=2163.000000 s hg38.chr14_KI270725v1_random 35059 5 + 172810 gatga s panTro5.chr22 3800266 5 + 37823149 catga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11089 5 - 112215 gatga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005473 5 + 13868332 gatga i ponAbe2.chr2a_random I 60 I 443 e nomLeu3.chr7b 114479776 0 + 115148730 C a score=466.000000 s hg38.chr14_KI270725v1_random 35064 14 + 172810 gatgacatgaaata s panTro5.chr22 3800271 5 + 37823149 catga--------- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11094 14 - 112215 catgacatgaaata i gorGor5.CYUI01000689v1 C 0 C 0 e ponAbe2.chr2a_random 9005478 443 + 13868332 I e nomLeu3.chr7b 114479776 0 + 115148730 C a score=187826.000000 s hg38.chr14_KI270725v1_random 35078 542 + 172810 atgaaatgaaataatgaaatgaaattgaaatgagatgagaagatacgagatgagatgaaatgatgagatgaaatgatgaaatga---tgagataagatgaaaagagtt--gatgagatgag---atgaaatgggatga------aaagagatgaaatgatgagatgaaatgaaatgatgagatgaaatga---ggtgaaatgaaattagacgaaatgtaatgagatgaaatgaaatgacataatgaaatgaaaaaatgaaatgacataatgaaatgaaaaaatgaaacgaaataatgaaatgaggtgaaattaaatgagatgatgaaattaaatgatgaaatgaaataatgaaatggaaatgaaatggaaatgagatgaaatgatgagatgaatgatgagatgaaatga----------tgaaatgcaatgatgagatgaaatgatgaaatga---gatgagatgagatgtaatgatgagaggaaatgatgagatgtaatgaaatgagatgaaatgaatgagatgaa------------------------atgaaataatgaaaggaaattgaattgagat---atgagatgaaatga s panTro5.chr22 3800276 475 + 37823149 ---------aataatgaaatgaaattgaaatgagatgagaagatacgagatgagatggaatgatga-------------aatga---tgagataagatgaaatgagtt--gatgagatgat--------------------------gagatgaaatgatgagatgaaatgaaatgatgagatgaaatga-------------aattagatgaaatgtaatgagatgaaatgaaatgacataatgaaatgaa-------------------------------gaaatgaaataatgaaatgaggtgaaattaaatgagatgatgaaattaaatgatgaaatgaaataatgaaatggaaatga---tgagatgagatgaaatgactagatgaatgatgagatgaaatgagatgaaatggtgagatgcaatgatgagatgaaatgatgaaatgatgagatgagatgagatgtaatgatgaaaggaaatgatgatatgtaatgaaatgagatgaaatgaatgagatgaa------------------------atgaaataatgaaaggaaattgagttgagatgagatgagatgaaatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11108 474 - 112215 atgaaatgaaataatgaaatgaaattgaaatgagatgagaagatacgagatgagatgaaatgatgagatgaaatgatgaaatga---tgagataagatgaaaagagtt--gatgagatgaa--------atgagatga------aaagagatgaaatgatgag-----atgaaatgatgagatgaaatga---ggtgaaatgaaattagacgaaatgtaatgagatgaaatgaaatgacataatgaaatgaa---------------------------aaatgaaatgaaataatgaaatgaggtgaaattaaatgagatgatgaaattaaatgatgaaatgaaataatgaaatggaaatga-----------aatgaaatga-gagatgaatgatgagatgaaatga----------tgagatgcaatgatgagatgaaatgatgagatga-------------------atgatgagaggaaatgatgagatgtaatgaaatgagatgaaatgaatgagatgaa------------------------atgaaataatgaaaggaaattgaattgagat---atgagatgaa---a i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114479776 546 + 115148730 ataagatgaaataatgaaatagaa-tgaaatgagatgtg-----atgagatgagatgaaataatgaaatgaaaaaatgaaatgaaattgaaatgagatgagaagatatgagatgagatgaaatgatgaaatgagttgatgagatgatgagatgaaatgatgagaagaaaagagatgatgagatgaaatgaaatgatggtatgaaatgagatgaaatgaaattagatgaaatg--------taatgagatgaa-----------------------------atgaaatgacataatgaaatgaggtgaaattaaatgagatgatgaaattaaatgattaaatgaaataatgaaatgcaaatga---tgagatgagatgaaatgatgagatgaatgatgagatgaaatgagatgaaatgaagagatg-aatgatgagatgaa---atgagatga---aatgagatgagatgtaatgatgagaggaaatgatgagatgtaatgaaatgagatgaaatgaatgagatgaaatgaatgagatgaaatgaagtgagatgaaataatgaaaggaaattgaattgagatgagatgaaatgaaatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9005478 443 + 13868332 I a score=2820.000000 s hg38.chr14_KI270725v1_random 35620 3 + 172810 tga s panTro5.chr22 3800751 3 + 37823149 tga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11582 3 - 112215 tga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9005921 3 + 13868332 tga i ponAbe2.chr2a_random I 443 I 130 s nomLeu3.chr7b 114480322 3 + 115148730 tga i nomLeu3.chr7b C 0 C 0 a score=61292.000000 s hg38.chr14_KI270725v1_random 35623 160 + 172810 gataaa---atgagatgaaataa------atgatgagatgaaatgatgaaatgctgaggtgagatgagatgaaatgagaagatgaaacgatgagatgaaatgaaag----gatgagatgaaatgatgagatgaaatgatgagatgagatgagatgaaatgagatgaaatgaga s panTro5.chr22 3800754 157 + 37823149 gataaa---atgagatgaaataa---gaaatgatgagatgaaatgatgaaatgctgaggtgagatgagatgaaa---ggagatgaaatgatgagatgaaatgaaag----gatgagatgaaatgatgagatga---gatgaaatgagatgaggtgagatgaaatgagatgaga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11585 158 - 112215 gataaa---atgagatgaaataa------atgatgagatgaaatgatgaaatgctgaggtgagatgagatgaaa---tgagatgaaacgatgagatgaaatgaaagaagagatgaaatgagatgaaatgatga---gatgaggtgagatgagatgaaatgagatgaaacgaga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114480325 159 + 115148730 aataaaatgatgaggtgaaataagaagaaatgttgagatgaaatgatgaaatgctgaggtgagatgagatgaaatgatgagaggtaatgatgagatga------------aatgagatgaaatgataagatgaaatgatgcgatgaaatgagatgagatgaaatg--atgaga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9005924 130 + 13868332 I a score=3223.000000 s hg38.chr14_KI270725v1_random 35783 11 + 172810 tgaaatgatga s panTro5.chr22 3800911 11 + 37823149 tgaaataatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11743 11 - 112215 tgaaatgatga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006054 11 + 13868332 tgagatgataa i ponAbe2.chr2a_random I 130 I 28 s nomLeu3.chr7b 114480484 4 + 115148730 tggg------- i nomLeu3.chr7b C 0 C 0 a score=3999.000000 s hg38.chr14_KI270725v1_random 35794 28 + 172810 aatgagatgagaagaaatgatgagatga s panTro5.chr22 3800922 5 + 37823149 aatga----------------------- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11754 28 - 112215 aatgagatgagaagaaatgatttgatga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114480488 26 + 115148730 --tgagatgagatgaaatgatgagatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006065 28 + 13868332 I a score=1092.000000 s hg38.chr14_KI270725v1_random 35822 2 + 172810 aa s gorGor5.CYUI01000689v1 11782 2 - 112215 aa i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006093 2 + 13868332 aa i ponAbe2.chr2a_random I 28 I 144 s nomLeu3.chr7b 114480514 2 + 115148730 aa i nomLeu3.chr7b C 0 C 0 e panTro5.chr22 3800927 0 + 37823149 C a score=49723.000000 s hg38.chr14_KI270725v1_random 35824 201 + 172810 ---------------------tgagatgagataaaatgatgagatggaatgaaatgaagtgaaatgaaatgaaataatgaaattgaaatgagatgagataaaatgatgagatggaatgaaatgaagtgaaatgaaatgaaataatga-----aattgaaatgagatgagatgaaatgagataaaatgatgagatgaaatgatgagaagaaatgagatgaaatgatta s panTro5.chr22 3800927 154 + 37823149 ---------------------tgagatgagaagaaaggatgagatg-----aaatgaggtaaaatgagatgaaatgatga------------------------gatgagatgaaatgaaataaagtgaaatgaaat-----aatga-----aattgaaatgagatgagatgaaatgagataaaatgatgaga-------------agaaatgagatgaaatgatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11784 123 - 112215 ---------------------tgagatgagataaaatgatgagatgaaatgaaatgaagtgaaatgaaatgaaataatga--------------------------------------------------------------aatga-----aattgaaatgagatgagatgaaatgagataaa---atgaga-------------tgaaatgagaagaaatgatga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114480516 200 + 115148730 tgagatgaaatggtgaaatgatgagatgagaagaaatgatgagatgaaatgagataagatgagatgaaatgaaatga---------------------------aatgagatgaaacgaaatgaggtgaaatgaaatgaaataatgaaatccaattgaaatgagatgagatgaaatgacataaaatgatgagatgaaatgatgagaagaaatgagatgaaatgatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006095 144 + 13868332 I a score=3368.000000 s hg38.chr14_KI270725v1_random 36025 8 + 172810 aatgatga s panTro5.chr22 3801081 8 + 37823149 aatgatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11907 3 - 112215 aat----- i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006239 8 + 13868332 aatgatga i ponAbe2.chr2a_random I 144 I 68 s nomLeu3.chr7b 114480716 8 + 115148730 aatgatga i nomLeu3.chr7b C 0 C 0 a score=13844.000000 s hg38.chr14_KI270725v1_random 36033 53 + 172810 ---gatgagatg--atgagataaaaaatgatgagatgaaaaatgatgagatgaaatga s panTro5.chr22 3801089 43 + 37823149 ---gatgagatg--atgagatgaaaaatgatgagatgaat----------tgaaatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11910 37 - 112215 ---gatgagatg--atgagatgaaaa---atgagatgaaa-------------aatga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114480724 57 + 115148730 gatgatgagatgaaatgagatgaaaaatga-aagatgaaaaatgatgagatgaaatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006247 68 + 13868332 I a score=2818.000000 s hg38.chr14_KI270725v1_random 36086 13 + 172810 gatgaattgaaag s panTro5.chr22 3801132 6 + 37823149 gatgaa------- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11947 6 - 112215 gatgaa------- i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006315 13 + 13868332 gatgaaatgaaat i ponAbe2.chr2a_random I 68 I 134 s nomLeu3.chr7b 114480781 13 + 115148730 gatgaaataaaat i nomLeu3.chr7b C 0 C 0 a score=36544.000000 s hg38.chr14_KI270725v1_random 36099 132 + 172810 gaaataatgaaataatgaaatgagatgaaatgaaatg-------atgaaatgatgatactgaaatgaaattgaaagataagatgaaatgatgag-----atgaaatgttgaaatgaaatgatgaagagatatgacatgaaatga s panTro5.chr22 3801138 115 + 37823149 ------atgaaataatgaaatgagatgaaatgaaatg-------atgaaatga-aatattgaaatgaaactgaaagatgagatgaaatgatga----------aatgttgaaatgaaatgatgaa-----atgaagagatgtgg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 11953 121 - 112215 ------atgag--gatgaaatgaaat--aatgaaatg-------atgaattgatgatattgaaatgaaattgaaagatgagatgaaatgatgagatgaaatgaaatgttgaaatgaaatgaagag---atgtgacatgaa---a i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114480794 126 + 115148730 --------gaaatagtgaactgagatgaaatgaaaagaaatgaaatgcaatgatgatattgaaatgaaattgaaagatgagatgaaacgatgag-----atgaaatgttgaaatgaagtgatgaa-----attaagagatgtgg i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006328 134 + 13868332 I a score=2820.000000 s hg38.chr14_KI270725v1_random 36231 3 + 172810 tga s panTro5.chr22 3801253 3 + 37823149 tga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12074 3 - 112215 tga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006462 3 + 13868332 tga i ponAbe2.chr2a_random I 134 I 65 s nomLeu3.chr7b 114480920 3 + 115148730 tga i nomLeu3.chr7b C 0 C 0 a score=25084.000000 s hg38.chr14_KI270725v1_random 36234 68 + 172810 gctgaaatgatgagatgaaatgaaatgaaatgagattaaatgatgagatgaaa----------aatgatgagatgaaa------------- s panTro5.chr22 3801256 69 + 37823149 gatgaaatgatgagacaaaatgaaatgaaatgagattaaatgatgagatgaaa-------tgagatgatgacatga--------------- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12077 62 - 112215 gctgaaatgatgag-----atgaaatgaaatgagattaaatgatgagatgaaa----------aatgatgagatga-a------------- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114480923 91 + 115148730 gatgaaatgatgagatgaaatgaaatgaaatgagattaaatgatgagatgaaaaatgagatgaaatgatgagatgaaatgatgagatgaag i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006465 65 + 13868332 I a score=-927.000000 s hg38.chr14_KI270725v1_random 36302 2 + 172810 -aa s gorGor5.CYUI01000689v1 12139 2 - 112215 -aa i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006530 2 + 13868332 -aa i ponAbe2.chr2a_random I 65 I 16 s nomLeu3.chr7b 114481014 2 + 115148730 tg- i nomLeu3.chr7b C 0 C 0 e panTro5.chr22 3801325 0 + 37823149 C a score=5827.000000 s hg38.chr14_KI270725v1_random 36304 16 + 172810 tgatgagatgaaat--ga s panTro5.chr22 3801325 15 + 37823149 -gattagatgaaat--ga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12141 18 - 112215 tgatgagatgaaatgaga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481016 16 + 115148730 agatgagatgagat--ga i nomLeu3.chr7b C 0 I 4 e ponAbe2.chr2a_random 9006532 16 + 13868332 I a score=2332.000000 s hg38.chr14_KI270725v1_random 36320 3 + 172810 tga s panTro5.chr22 3801340 3 + 37823149 tga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12159 3 - 112215 tga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006548 3 + 13868332 tga i ponAbe2.chr2a_random I 16 I 35 s nomLeu3.chr7b 114481036 3 + 115148730 cga i nomLeu3.chr7b I 4 C 0 a score=-8937.000000 s hg38.chr14_KI270725v1_random 36323 25 + 172810 gatga----aatgagatgagatgaattga-------------------------------------------------------------------------------------------- s panTro5.chr22 3801343 15 + 37823149 gatga--------------gatgaattga-------------------------------------------------------------------------------------------- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12162 15 - 112215 gacga--------------attgagatga-------------------------------------------------------------------------------------------- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481039 121 + 115148730 gatatacctaatgctaaatgacgagttaatgggtgcagcaaaccaacatgtcacatggatacatatgtaacaaacctgcacattgtgcacatgtaccctaaaacttaaagtataataataa i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006551 35 + 13868332 I a score=5068.000000 s hg38.chr14_KI270725v1_random 36348 7 + 172810 gatgaga s panTro5.chr22 3801358 7 + 37823149 gatgaga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12177 7 - 112215 gatgaga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006586 7 + 13868332 gatgaga i ponAbe2.chr2a_random I 35 I 136 s nomLeu3.chr7b 114481160 7 + 115148730 aataaaa i nomLeu3.chr7b C 0 C 0 a score=57879.000000 s hg38.chr14_KI270725v1_random 36355 155 + 172810 tgagatgaaataatgaaattaggtgaaataatgaaatgagatgaaataatgaaataaaattgtaatgagatgagaagaaatga---gatgaaatgttgaaaagaaaggaggaaatgatgagatgagatgaaatga----------------gatgaaatgaat--tgagatgaaa-a--------- s panTro5.chr22 3801365 169 + 37823149 ttagatgaaataatgaaattaggtgaaataatgaaatgagatgaaatga-aaaatgaaattgaaatgaggtgagaagaaatgatgagatgaaatgttgaaa-----ggaggaaatgatgagatgagatgaaatgatgagatgaaatgatgagatgaaatgaat--tgagatgaaatg--------- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12184 159 - 112215 tgagatgaaataatgaaattaggtgaaataatgaaatgagatgaaataatgaaataaaattgaaatgagatgagaagaaatga---gatgaaatgttgaaa-gaaaggaggaaatgatgagatgagatgaaatga-------------tgagatgaaatgaatgatgagatgaaa-a--------- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481167 159 + 115148730 taaaat-aaataatgaaattaggtgaaataatgaaatgagatgaaat---gaaataa---tgaaatgagat--gaaataatga---gatgaaatgttgaaatgaaaggatgaaatgaggaaatgagatgaaatga-------------tgagatgaaatgaat--tgagatgaaatgagatgaaaa i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006593 136 + 13868332 I a score=1854.000000 s hg38.chr14_KI270725v1_random 36510 4 + 172810 atgg s panTro5.chr22 3801534 4 + 37823149 atga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12343 4 - 112215 atga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006729 4 + 13868332 atca i ponAbe2.chr2a_random I 136 I 71 s nomLeu3.chr7b 114481326 4 + 115148730 gtga i nomLeu3.chr7b C 0 C 0 a score=23253.000000 s hg38.chr14_KI270725v1_random 36514 70 + 172810 tatgaaaaatgat---atcaaaaatatgagatgaaatgaaatgagatgatatgaaatgacataatgaaataag---- s panTro5.chr22 3801538 61 + 37823149 gatgaaaaatgat---atgaaaaatg---------atgaaatgagatgatatgaagtgacataatgaaataaa---- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12347 64 - 112215 tatgaaaaatgat---atcaaaaaca-----tgacatgaaatgaaat-atatgaaatgacataatgaaataaa---- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481330 77 + 115148730 tatgaaaaatgatgagatgaaaaatatgagatgaaatgaaatgagatgatatgaaatgacacaatgaaataatgaaa i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006733 71 + 13868332 I a score=3730.000000 s hg38.chr14_KI270725v1_random 36584 4 + 172810 tgaa s panTro5.chr22 3801599 4 + 37823149 tgaa i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12411 4 - 112215 tgaa i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006804 4 + 13868332 tgaa i ponAbe2.chr2a_random I 71 I 131 s nomLeu3.chr7b 114481407 4 + 115148730 tgaa i nomLeu3.chr7b C 0 C 0 a score=59985.000000 s hg38.chr14_KI270725v1_random 36588 149 + 172810 attagatgaaatgaaatagtgaaatgaaatgatgaaatgaaataatgaaaattaaatggaaatgggatgagatgagatttgatgaaatgatgagatgaaatgatgagatgatatgaaatgatgagatgagatgggataagatgaaatga s panTro5.chr22 3801603 129 + 37823149 attagatgaaatgaaatagtgaaatgaaatgatgaaat-----aatgaaaatgaaatggaaatg-----agatgagatttgatgaaatgatgagatgaaatgatgagatgata----------ggatgagataaaatgagatgaaatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12415 149 - 112215 attagatgaaatgaaatagtgaaatgaaatgatgaaatgaaataatgaaaatgaaatggaaatgagatgagatgagatttgatgaaatgatgagatgaaatgatgagatgatatgaaatgatgagatgagatgggataagatgaaatga i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481411 125 + 115148730 attagatgaaatgaaatagtgaaatgaaatga-----------aat---aatgaaatggaaatg-----agatgagatttgatgaaatgatgagatgaaatgatgagatgata-----tgatgagatgagatgggatgagatgaaatga i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006808 131 + 13868332 I a score=2820.000000 s hg38.chr14_KI270725v1_random 36737 3 + 172810 tga s panTro5.chr22 3801732 3 + 37823149 tga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12564 3 - 112215 tga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006939 3 + 13868332 tga i ponAbe2.chr2a_random I 131 I 35 s nomLeu3.chr7b 114481536 3 + 115148730 tga i nomLeu3.chr7b C 0 C 0 a score=4588.000000 s hg38.chr14_KI270725v1_random 36740 17 + 172810 gataaaatgatga-----gatg s panTro5.chr22 3801735 22 + 37823149 gatgaaatgatgaaatgagatg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12567 13 - 112215 gataaaatgatga--------- i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481539 17 + 115148730 gataaaattatga-----gatg i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9006942 35 + 13868332 I a score=3614.000000 s hg38.chr14_KI270725v1_random 36757 6 + 172810 aaatga s panTro5.chr22 3801757 6 + 37823149 aaatga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12580 2 - 112215 ----ga i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9006977 6 + 13868332 aaatga i ponAbe2.chr2a_random I 35 I 47 s nomLeu3.chr7b 114481556 6 + 115148730 aaatga i nomLeu3.chr7b C 0 C 0 a score=23355.000000 s hg38.chr14_KI270725v1_random 36763 47 + 172810 ------------------tgagatgaaatgatgaggtgaagtgaTGCACTGTCACGTGTGTGTCT s panTro5.chr22 3801763 47 + 37823149 ------------------tgagatgaaatgatgaggtgaagtgaTGCACTGTCACGTGTGTGTCT i panTro5.chr22 C 0 I 5 s gorGor5.CYUI01000689v1 12582 47 - 112215 ------------------tgaaatgaaatgatgaggtgaagtgatgCACTGTCACGTGTGTGTCT i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481562 65 + 115148730 tgaaatgagataaaatgatgagaagaaatgatgaagtgaagtgaTGTACTGTCACGTGTGTGTCT i nomLeu3.chr7b C 0 I 5 e ponAbe2.chr2a_random 9006983 47 + 13868332 I a score=910.000000 s hg38.chr14_KI270725v1_random 36810 1 + 172810 T s panTro5.chr22 3801815 1 + 37823149 T i panTro5.chr22 I 5 C 0 s gorGor5.CYUI01000689v1 12629 1 - 112215 T i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9007030 1 + 13868332 T i ponAbe2.chr2a_random I 47 I 2212 s nomLeu3.chr7b 114481632 1 + 115148730 T i nomLeu3.chr7b I 5 C 0 a score=1129688.000000 s hg38.chr14_KI270725v1_random 36811 2200 + 172810 TTTCCCAACCAACAAAAATTATAATTCATTAA-TTTTATTTTATTATTTAAGAGTATTCTTAAGAGTTGAAGGAAAAATAATATCTGTACATTATGGGTTACAAT-TAAGTATAAATAATACATAAATATATTAAAACTTACAAAGAATATGTTTCAGAATCGAATATACCATGCTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTAAAAATAACTGTTTCCAAAACAGTTTTACATTCAAAATATGAAAAAGATGTATTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACAT---AATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAAAAATGTTATTACCTCTTAAATTAGGATTTTTAGGTGATATAGGCAGAAAGGAAGGCAAGTTTTTATAACTTTGTCTAAATGAACTTTCTAAATGCCTGAGTATTAAAAGATAGCATGTCTATAAATCACAATATATATATTACTGTATGACGTAGGACAAATCAAAACCATTACCTCTGATAACATTATATTGTGCCCAGTATAAAATAGATATAATAATACCTCAAACTTAAATCCAGGCATTGTCATTGAATATCTTAAGAATATGCAGCAAAGGTGCTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaatatta----tttcaatctataaacgtggatgtctttccttttttgtgttttctttaatttctttcattaatatttgtcatttttgttgtcaaaatcttttacttccttggttaaatttatctctaagtacatttttgtagctattgtaaaaggaattactttcttaatttcttgtttcagctagtttactatcaatatgtagaaatgctactgatttttgtatgttgatttatatcctgcaactttattaatttcatgtatcaccctaagaagcttttggtagagtctta-tttttttccatgtataagatcacattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttatttctttctctcacctaatcgtcctggctaagactttcactatgtgaaatatgattggtgaaaatagacatccttttcttgttccagtataatctttttcttgttcacagtaaaatctttcaccttttccacactcagtatgatcttagctgtagatttgtcctttatgtccttt-gtgtcaaggcatatattttctatactaaattgatgagaggttttttgtcatgtaagaatatttaattttgccaaacgcttttattgtgtttgttaatttaaccatatggttttCACtatatatccaaaggaaagaaaatcagtatatcaaagagttacctgcacccccatgtttattacagcactatgcacagtagccaagatatggaatcaacaaaagtgtccatcaacagatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttgtggcaacaagaatgcaagtggagggcattatgttaggtgaaataagcctggcatagaaacataaacaccacataactacgtgttctcacttatgtatggaagctaaaatttttaatctcgtagaaatagata---gtagagttttggttaccatatcctggaaagagtaggagacagaagagtataagaaaaatgtggttaatacatacaaaattacagctggagagaaggaagaagttctagttctctacagcactgttgggtgactgtagttaatgggaatttattgtgtgttttcaaacaactaaaataaaaga--ttttgaatattctcactgcaaagaaataatacatgatttagataatggatatgataatgactctgacttgatctttacgcattgcataaatatatcaaaatatcactctgtaacccataacatgtacatttattatatgtcaattaaaGTAAATTTAAAAGAGGAAAGATGAGGTAAAGGTAAATGTACACAATTTAATTGCTTTTTCTTCTATAAAACCC--GAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAATAAAAAAAAATCAAAATCACCAAAAAAGAGC s panTro5.chr22 3801816 2203 + 37823149 TTTCCCAACCAACAAAAATTATAATTCATT----TTAATTTTATTATTTAAGAATATTCTTAAGAGTTGAAGGAAAAATAGTATCT--ACATTATGAGTTACAATCTAAGTATAAATAATACATAAATATATTAAAACTTACAAAGAATATGTTTTGGAATCGAATATACCATGTTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTAAAAATAACAGTTTCCAAAACAGTTTTACATTCAAAATATGAAAAAGATGTCTTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACATGATAATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAA---TGTTATTACCTCTTAAATTAGGATTTTTGGGTGATATAGGCAGAAAGGAAGGCAAGTTTTTGTAACTTTGTCTAAATGAACTTTCTAAATGCCTGAGTATTAAAAGATAGCATGTCTATAAATCACAATGTATATATTACTGTATGACCTAGGACCAATCAAAACTGTTACCTCTGATAATATTATATTGTGCCCAATATAAAATAGATATAATAATACCTCAAACTTAAATCCAGGCATTGTCATTGAATATCTTAAGAATATGCAGCAAAGGTGTTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaatattagttatttcaatctataaacatggatgtctttccttttttgtgttttctttaatttctttcattaatatttgtcatttttgttgtcgaaatcttttacttccttggttaaatttatttctaagtacatttttgtagctattgtaaaaggaattgctttcttaatttcttgtttcagctagtttactatcaatatatagaaatgctactgatttttgtatgttgatttatatcctgcaactttattaatttcatgtatcaccctaagaagcttttggtagcgtctta-tttttttccgtgtataagatcacattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttgtttctttctctcacctaattgtcctggctaagactttcactatgtgaaatatgattggtgagaataggcatccttttcttgttacagtaaaatctttttcttgttcacagtaaaatctttcaccttttccacactcagtatgatcttagctgtagatttgtcctttacgtccttccgtgttaaggcatatattttctatactaaattgttgagaggttttttgtcatgtaagaatatttaattttgccaaacgcttttattgtgtttattaatttaatcatatggctttCAgtatatatccaaaggaaaaaaaatcagtatatcaaagagttacctgcacccgcatgtttattacaacactattcacaatagccaagatatggaatcaacaaaagtgtccatcaacggatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttgtggcaacaagaatgcaagtggagggcattatgttaggtgaaataagcctggcatagaaacataaacaccacataactacgtgttctcacttatgtatggaagctaaaatttttagtctcatagaagtagata---gtagagttttggttaccatatcctggaaagagtaggagaaagaagagtataagaaaaatgtggttaatacatacaaaattacagctggagagaaggaagaagtcctagttctctacagcactgttgggtgactgtagttaatgggaatttattgtgtgttttcaaataactaaaataaaaga--ttttgaatattctcactgcaaagagataatacatgatttaggtaatggatatgataatgactgtgacttgatctttatgcattgcataaatatatcaaaatatcactctgtaccccataacatgtacatttattataggtcaattaaaGTAAATTTAAAAGAGAAAAAATGAGGTAAAGGTAAATGTACAGAATTTAATTACTTTTTCTTCTATAAAACCCAAGAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAATAAAAAAAAATCAAAGTCACCAAAAAAGAGC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 12630 2195 - 112215 TTTCCCAACCAACAAAAATTATAATTCATTAA-TTTTAATTTATTATTTAAGAATATTCTTAAGAGTTGAAGGAAAAATAATATCTGTACATTATGGGTTACAAT-TAAGTATAAATAATACATAAATATATTAAAACTTACAAAGAATATGTTTCGGAATCGAATATACCATGCTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTGAAAATAA--GTTTCCAAAACAGTTTTACATTCAAAATATGAAAAAGATGTCTTTGTGTTCCTTAATCTGATGAGATTTTCACACTCTGCACATGATAATTGTTAGATTTTTATTGTGTTGATAAATTGTATATCAAATAAAAAATGTTATTACCTCTTAAATTAGGA-TTTTAGGTGATATAGGCAGAAAGGAAGGCAAGTTTTTATAACTTTGTCTAAATGAACTTTCTAAATGTCTGAGTATTAAAAGATAGCATGTCTATAAATCACAATGTATATATTACTGTATGACCTAGGACCAATCAAAACCGTTACCTCTGATAACATTATATTGTGCCCAGTATAAAATAGATATAATAATACCTCAAACTTAAATCCAGGCATTGTCATTGAATATCTTAAGAATATGCAGCAAAGGTGCTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaatatta----tttcaatctataaacgtggatgtctttccttttttatgttttctttaatttcttt-attaatatttgtcatttttgttgtcgaaatcttttacttccttggttaaatttatttctaagtacatttttgtagctattgtaaaaggaattgctttcttaatttcttgtttcagctagtttactatcaatatatagaaatgctactgatttttctatgttgatttatatcctgcaactttattaatttcatgtatcaccctaagaagcttttggtagagtctta-tttttttccatgtataagatcacattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttatttctttctctcacctaattgtcctggctaagactttcactatgtgaaatatgattggtgagaataggcatccttttcttgttccagtaaaatctttttcttgttcacagtaaaatctttcaccttttccacactcagtatgatcttagctgtagatttgtcctttatgtccttt-gtgttaaggcatatattttctatactaaattgttgagaagttttttgtcatgtaagaatatttaattttgccaaacgcttttattgtgtttattaatttaatcatatggttttCAgtatatatccaaaggaaagaaaatcagtatatcaaagagttacctgcacccccatgtttattacagcactattcacaatagccaagatatggaatcaacaaaagtgtccatcaacagatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttgtggcaacaagaatgcaagtgg-gggcattatgttaggtgaaataagcctggcatagaaatataaacaccacataactacgtgttctcacttatgtatggaagctaaaatttttaatctcgtagaagtagata---gtag-gttttggttaccatatcctggaaagagtaggagaaagaagagtataagaaaaatgtggttaatacatacaaaattacagctggagagaaggaagaagttctagttctctacagcactgttgggtgactgtagttaatgggaatttattgtgtgttttcaaataactaaaataaaaga--ttttgaatattctcactgcaaagaaataatacatgatttaggtaatggatatgataatgactctgacttgatctttacgcattgcataaatatatcaaaatatcactctgtaccccataacatgtacatttattatatgtcagttaaaGTAAATTTAAAAGAGAAAAAATGAGGTAAAGGTAAATGTACAGAATTTAATTACTTTTTCTTCTATAAAACCC--GAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAAT--AAAAAAATCAAAATCACCAAAAAAGAGC i gorGor5.CYUI01000689v1 C 0 C 0 s nomLeu3.chr7b 114481633 2195 + 115148730 TTTCCGAACGGAAAAAaattataattcattaattttaattttattatttaaGAATATTCTTAAGAGTTGAAGGAAAAATAATATCTGTTCATTATGGGTTACAACCTAAGTATAAATAATACATAAATATATTAAAACTTACACAGAATATGTTTTGGAATCGAATATACCATGCTTCTGTGATGACAGTTATTTCATGCTGGTTGTCACAATTTTACATGAAAAACTAATGAAAAAATGTTTTTAACTGTTTCTAAAAATAACAGTTTCCAAAAGAGTTTTACTTCCGAAATATGACAAAGATGACTTTGTGTTCCTTAATCTGATGAGATGTTCACACTCTGCACAAGATAATTGTTAGATTTTTATTGTGTTGATAAATTGTGTATCAAATAAAAAATGTTATAGCCTCTTAAATTAGGATTTTTAGGTGATATAGGCAGAATGGAAGGCAAGTTTTTATAACTTTGTCTAAATGAACTTTCTAAATTCCTGAGTATTAAAAGATAGCTTGTCTATAAATCACAATGTATATATTACTCTATGACCTAGGACCAATCAAAACTGTTATCTCTGATAACATTATATTGTGCCCAATATAAAATAGATACAATAACACCTCAAACTTAAATCCAGGCATTATCATTGAGTATCTTAAGAATATGCAGCAAAGGTGCTTTTAAAAATACAAGCtagtgattgtactaaatttgtaaatcacataggatagtgggtcattttaagaatatta----tttcaatctataaacatggatgtctttccttttttgtg-----tttaatttctttcattaatatttgtcatttttgttgtagaaatcttttacttccttggttaaatttatttctaagtacatttttgtaac--tcgtaaaaggaattgcttt-ttaatttcttgtttcagctagtttactatcaatatatagaaatgctactgatttttgtatgttgatttatatcctgcaactttattcatttcatttatcaccctaagaagcttttggtagagtcttattttttttccatgtataagatcgcattgtctttaaacagggacaatttgactgtctcctttccaattcagatgtcctttatttctttctctaacctaattgtcctggctaagactttcactatgtgaaatatgattggtgaaatcaggcatccttttcttgttccagtaaaatctttttcttgttcacagtaaaatctttcaccttttccacattcagtatgatcttagctgtagatttgtcctttatgtccttccgtgttaaggcatatattttctatactaaattgttgagaggttttttgtcatgtaagaatatttaattttgccaaacgcttttattgtgtttattaatttaatcatatggttttCAgtacatatccaaaggaaagaaaatcagtatatcaaagagttacctgcacccccatgtttattacagcactattcacaatagccaggatatggaatcagcataagtgtccatcaacagatgaatggataaagaaatgtgacatacatatataatggaatattatttagtcataataaagaacaaaatcctgttatttatggcaacaagaatgcaagtggagggcattatgttaggtgaaataagcctggcatagatacataaacaccacataactacatgttctcacttatgtatggaagttaaaatttttaatcttgtagaagtagataacggtagagttctggttaccatatcctggaaagagtaggagaaacaagagtataagaaaaatgtggttaatacatacaaaattacagctggagagaaggaagaagttctagttctctacagcactattgggtgactgtagttaacgggaacttat--tttgttttcaaataactaaaataaaagaatatttgaatattctcactgcaaagaaataatacatgatttaggtaatggatatgataatgactctgacttgatctttacacgttgtataaatatatcaaaatataactctgtaccccataacatgtacatctattatatgtcaattaaaataaaTTTAAAAGAGAAAAAATGAGGTAAAGGTAAATGTACAGAATTTAATTACTTTTTCTTCCATAAAACCCAAGAGTCAGTACCAAGAAGAGTCAATTTATTAGTTTTCTAAAATAAAAAAAG---------ACCAAAAAAGAGC i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9007031 2212 + 13868332 I a score=910.000000 s hg38.chr14_KI270725v1_random 39011 1 + 172810 A s panTro5.chr22 3804019 1 + 37823149 A i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 14825 1 - 112215 A i gorGor5.CYUI01000689v1 C 0 C 0 s ponAbe2.chr2a_random 9009243 1 + 13868332 A i ponAbe2.chr2a_random I 2212 I 2745 s nomLeu3.chr7b 114483828 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 a score=16080.000000 s hg38.chr14_KI270725v1_random 39012 30 + 172810 ATATCCAAGAAAACATTGAAAATGAAACAC s panTro5.chr22 3804020 30 + 37823149 ATGTCCAAGAAAACATTGAAAATGAAACAC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01000689v1 14826 30 - 112215 ATATCCAAGAAAACATTGAAAATGAAACAC i gorGor5.CYUI01000689v1 C 0 N 0 s nomLeu3.chr7b 114483829 30 + 115148730 ATATCCAAGAAAACGTTGAAAATGAAACAC i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9009244 2745 + 13868332 I a score=771858.000000 s hg38.chr14_KI270725v1_random 39042 1551 + 172810 AACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTGTTCCTAGATACCGATTTACTGATGACCATTTAAATAGAATTTTATTCTATCTAATTCATTTATACTCCCAGAGTTCGAAATTACATTTTACCTACAAtaaatgagataacactt-taaattatatggtactctgcctaacacacgttaataactcaatacatgttagcAATAAACTTTTAGTATAG------------------------------------------------------------------------------------------------------TAGTCAAAGTATTAATTTCTCACATTGCAATTTCCTTCAAAGACATGAATACAACCTTTCTAATGACTCCTTGTTCATCAAGATACCTCTTCAAATTATTCTATTTGTTTCATTCAGTATATTG------------TCTGTGCATACCGATAT-----TACACTCttttcttt---ttttgagatggaacctcattctgttactgatgctggaatgaggcggcatgatcttggttcactgcaacctccacctcccaggttcaagcgattctcctgtctcagccccccaagtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtacagtcagagtttcaccctgttgtccaggctggactcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagccTGATATTGCACTCTTGGATTTTGAACACTGAATATCTTTTTGAAAGATTACACCTCTTTACCTCTTCGTGCTTCAGAAATTATTTTCCTTCAAGTGTTCTAAGAGTCTAATGAAGAATGAA-GTCATGTTTTATCACTTTTGTCCTTAAAGA----TTTCAGACATGCTGAAACTGATTGAAGTATCATCTGCTACCCGATAGATTAATTATCTCTAGTTGTAGGAGTGGATACATCTTTAATGGTATATTTTTGGTTATTGTCTTATTTTTGATGTAGTATTCTATCAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATAGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccaggtatggtggctcttgcccata--tccagcactttgggaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccatgtctctactaaaaacacaaaattagccaggcatggtggtgcatgcttgtagtcctaaccactcgagaggctgaggcaagagaatcacctgaacctgggaggcaaaagttgctaggttgctgtgaggcaaattcgcaccattacactccagcctgggtgaaaagagcaaaactctgtctcaaaaaaaaaaaCCC------ACCAAAAACTGCTTCTGAATGGAATTGTACATACAA-TTTTGATGAAAAAAATTATCAAGTGCATAAGTTCATAATAGAAAAACCAATAATACTCCAGGCACAAGTTAGTACTAAAA-----AAATTATGTTGAATATTCTCTAATACAACATGCTTTTTCCCTTCATGAACAATTTGTGTTTTACTGAGAAGAGTCATTGTTTATGGTAGAC s panTro5.chr22 3804050 1575 + 37823149 AACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTGTTCCTAGATACCGATTTACTGATGGCCATTTAAATAGAATTTTATTCTATCTAATTCATTTATACTCCCAGAGTTCGAAATTACATTTTGCCTAAAAtaaatgagataacacttgtaaattatatggtactctgcctaacacacgttaataactcaatacatgttagcAATAAACTTTTAGTATAG------------------------------------------------------------------------------------------------------TAGTCAAAGTATTAATTTCTCACATTGCAGTTTCCTTCAAAGACATGAATACAACCTTTCTAATGACTCCTTGTTCAACAAGATACCTCTTCAAATTATTCTATTCGTTTCATTCAGTATACCGATATGATATTCATCTGTGTATACCGATATGATATTACACTCGtttttttattttttgagatggaatctcattctgttactgatgctggagtgaggtggcatgatctttgttcactgcaaactccacctcccaggttcaagcgattctcctgtctcagccccccaagtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtacagtcagagtttcaccctgttgtccaggctggtctcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagccTGATATTGCACTCTTGAATTTTGAACACTGAATATCTTTTTGAAAGATTACACCTCTTTACCTCTTCGTGCTTCAGAAATTATTTTCCTTCAAGTGTTCTAAGAGTCTAATGAAGAATGAA-GTCATGTTTTATCACTTTTGTCCTTAAAGAAAGATTTCAGACATGCTGAAACTGATTGAAGTATCATTTGCTACCAGATAGATTAATTTTCTCTAGTTGTAGGAGTGGATACATCTTTAACGGTATACTTTGGGTTATTGTCTTATTTTTGATGCAGTATTCTATAAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATGGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccgggtatggtggctcttgcccata--cccagcactttgggaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccatgtctctactaaaaacacaaaattagccaggcatggtggtacatgcttatagtcctaaccactcaggaggctgaggcaagagaatcacctgaacctgggaggcaaaggttgctaggttgctgtgagccaagttcgcaccattgcactccagcctgggtgaaaagagcaaaactctgtctcaaaaaaaaaaCCCCC-----ACCAAAAACTGCTTTTGAATGGAGTCGTACATACAA-TCTTTATGAAAAAAATTATCAAGTGCATAAGTTCATAATAGAAAAACCAATAATACTCCAGGCACAAGTTAGTACTAAAA-----AAGTTATGTTGAATATTCTCTAATACAACATGCTTTTTCCCTTCATGAACAATTTGT--TTTACTGAGAAGAGTCATTGTTTATGGTAGAC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 6 1552 + 57002 AACATTTAGTAAGAATAGAAAACTTGGGCACTGTATCACCCTCTTCCTAAATACCGATTTACTGATGGCCATTTAAATAGAATTTTACTCTATCTAATTCATTTATACTCCCAGAGTTTGAAATTACATTTTACCTACaata----agataacacttgtaaattatatggtactctgcctaacacacgttaatagctcaatacatgttagcAATAAACTTTTAGTATAG------------------------------------------------------------------------------------------------------TAGTCAAAGTATTAATTTCTCACATTGCAATTTCCTTCAAAGACATAAATACAACCTTTCTAATGACTCCTTGTTC-TCAAGATACCTCTTCAAATTATTCTATTTGTTTCATTCAGTATATTA------------TCTGTGTATACCGATAT-----TACACTCttttcttt---ttttgagatggaatctcattctgttactgatgctggagtgaggtggcatgatctcggttcactgcaacctccacctcccaggttcaagcgattctcctgtctcagccccccaagtagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtacagtcagagtttcaccctgttgtccaggctggactcgaactcctgacctcaggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagcATGATATTGCACTCTTGGATTTTGAACACTGAATATCTTTTTGAAAGATTACACCTCTTTACCTCTTCGTGCTTCAGAAATTATTTTCCTTCAAGTGTTCTAAGTGTCTAATGAAGAATGAA-GTCATGTTTTATCACTTTTGTCCTTAAAGA----TTTCAGACATGCTGAAACTGATTGAAGTATCATTTGCTACCAGATAGATTAGTTATCTCTAGTTGTAGGAGTGGGTACATCTTTAATGGTATATTTTGGGTTATTGTCTTATTTTTGATGTAGTATTCTGTCAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATGGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggccaggtatggtggctcttgcccata--cccagcactttgggaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccatgtctctactaaaaacacaaaattagccaggcatggtggtgcatgcttgtagtcctaaccactcgagaggctgaggcaagagaatcacctgaacctgggaggcaaaagttgctaggttgctgtgagccaaattcgcaccattgcactccagcctgggtgaaaagagcaaaactctgtctcaaaaaaaaaaaaaaaaaaagaccaaaaaCTGCTTTTGAATGGAGTTGTACAT-CAA-TTTTGATGAAAAAAATTATCAAATGCATAAGTTCATAATAGAAAAACCAATAATACTCCAGGCACAAGTTAGTACTAAAA-----AAATTATGTTGAATATGCTCTAATACAACATGCTTTTTCCCTTCATGAACAATTTGTGTTTTACTGAGAAGAGTCATTGTTTATGGTAGAC i gorGor5.CYUI01002012v1 N 0 C 0 s nomLeu3.chr7b 114483859 1652 + 115148730 AACATTTAGTAAGAATAGAAAACTTGGGCACTTTATCACCCTGTTCCTAGATACCAATTTACTGACGGCCATTTAAATAGAATTTTATTCCATCTAATTCATATATACTCTCAGAGTTCAAAATTACGTTTTACCTACAATAAA-GAGATAACG--TGTAAATTATGT--TACTCTGCCTAACACACGTTAATAA-TCAATACATGTTAGCAATAAACTTTTAGTGTAGTACTAAATAGCACTTTTAATATAGTACTAAATAGTACTTTTTCAGTATAGTACTAAATAGTACTTTTAGTATAGTACTAAATAGTACTAAATTTACTAAATTTAGTCAAAGTACTAATTTCTCACATTGAAATTTCCTTCAAAGACATGAA---AACCTTTCTAATGACTCCTTGTTCATCAGGATACCTCTTCAAATTATTCTATTTGTTTCATTCAGTTTATTA------------TCTGTGTATACCTATAT-----TACACTCtttttt-----ttttgagatggtatctcattctgttactgacgttggagtgaggtggcatgatctccgttcactgcaacctccacctcccaggttcaagcgattctcctgtctcagccccccaactagctaggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtagagtcagggtttcaccctcttggccaggctggtctagaactcctgacctctggtgatccacccaccatggcctcccaaagtgctgggattacaggcataagccaccgcacccagccTGATATTGCAGTCTTGGATTTTGAACACTGAATAACTTTTTGAAAGATTGCACCTCTTTACCTCTTTGTGCTCCAGAAATTATTTTCCTTCAAGTGTTGTAAGAGTCTAATGAAGAATGAAGGTCATGTTTTATCACTTTTGTCCTTACATA----TTTCAGACATGCTGAAACTGATTGAAGTATAATTTGCTACCAGATAGATTAATTATCTGTAGTTGTAGGAGTGGATACATCTTTAATGGTATATTTTGGGTTATTCTCTTATTTTTGATGCAGTATTCTATAAATAATTTATTAAACCTGGCATCCTTGGGTGAGCATAGATTTTTCAACTTTGGTGTTATATTGTGTTTGCTTTTAAAAACTGCTTTTGAggctgggtatggtggctcttgccagtaatcccagcactttggaaggccaaggtgggcggattacctcaggtcaggagttcaagaccagcctggtcaacatggcaaaaccacgtgtctactaaaagcacaaaattagccaagcatgatggtgcatgcttgtagtcctaaccactcaggaggctgaggcaagagaatcacctgaacctgggaggcgaaggttgctaggttgctgtgagccaagttcacactattgcactccagcctaggtgaaaagagcaaaactccgtatcaaaaaaaaaaaCCC------ACCAAAAACTGCTTTTGAATGGAGTTGTAAATACAATTTTTTATGAAAAAAATTAGCAAGTGCATAAGTTCATAATAGAAAAACCAATAATATTCCAGGCACAAGTTAGTACTAAAAAAATTAAATTATGTTGAATATTCTGTAATACAACATGATTTTTCCCTTCATGAACAATTTGTGTCTTACTGATAAGACTCACTGTTTATGGTAGAC i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9009244 2745 + 13868332 I a score=6066.000000 s hg38.chr14_KI270725v1_random 40593 7 + 172810 ATTAGAC s panTro5.chr22 3805625 6 + 37823149 -TTAGAC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 1558 7 + 57002 ATTAGAC i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chr2a_random 9011989 7 + 13868332 ATTAGAC i ponAbe2.chr2a_random I 2745 I 1553 s nomLeu3.chr7b 114485511 7 + 115148730 ATTAGAC i nomLeu3.chr7b C 0 C 0 a score=799117.000000 s hg38.chr14_KI270725v1_random 40600 1541 + 172810 CACAGATGAATATGTACTTTAAACACTCTTAGTTACTTTCTTAATTTTATATCTGCTGCTTCATGCTTCTGTTTATTTTCATTCTTTCCAATGTCCACATTCTAGTAAATTTGAATATTTTAATCCAAGTTTATATACTATTTAATATTGCTTGTATAGTTTAGTATTGTGAAGACTCAAAAAGGTTTACAGAAAGAAGAAAA--AGATCAACATGTTATTAATCATTTAAAGATC-TTTTGAAATCTTTGACCTTTATATTTTAATGAATAAAATATTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCATCCAGTATTTCTTTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTATGTTTATCTGGGTTTTGAAAAGTGCTGTTTCCTAATATGAGAAAGCCATTTACATTTTTAATTCTACAAAGGCAAATGGAATGGTACTAAATTATTTACATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTCCTACAGAGTTGCAGATATGCAATCATAGAATATTTCTGGGAGCTAATCCTTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTAAACTTTCAAATTATCCAGGTAATGGGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCC-TGTTCATTGGGTAATAAGTTTTCATTCTT-----CTAATACTCAAAATGTCCTTTAATTTTTAAT-------AGTCATATCATTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAAAATAATTTTGAAACAGGAGAAAGTATTCTTTATTACTATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGGTGACGCCCTTCACCCTATCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTATTCTTTAGAAAAATCT---CTGTGCCTTATAAAGAATATGATTGTTGGCATTCAAAAGCCAGCGAAGTATACATTATTAGCCTGTTGCCTAACTCATTTCTTTAAGAAACTACACTAATTACCCACATACTTATGTTTTTATTTCCTCATTATTTCTGGAGAAAACAAATACTGCTAACATGATATTTGTAAGAGAGAAAAAAGTCTTTTCTTGAAAAGTGCTGTCATTGTAGTACTAACTTATAGTATCAACTTCTTTATAAACTCCTTATACACTTTTTATTCTGAGAGAAATAAAAAAGCTAAAAGTGAAATGACTTTTTTAACTCTCCATATTATAAGCACCCATGTTGGTAATTTAGGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCGAGATTACAAAATAAAAAGTATTTTGTCTCTTTGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGATATCAGTATTCTGAAATAATATGTTTACTATCTTTTGATAAGCATTTAAAATATTAGATTTATTGTTACTCTTCTGCCTTCATTGGGCTGGAAGAATAATTGTT s panTro5.chr22 3805631 1556 + 37823149 TACAGATGAATATGTACTTTAAACACTCTTAGTTGCTTTCTTAATTTTATATCTGCTGCTTTATGCTTCTGTTTATTTTCATTCTTTCCAATGTCCACATTCTAGTAAATTTGAATATTTTAATCCAAGTTTATATACTATTTAATATTGCTTGTATAGTTTAGTATTTTTAAGACTCAAAAAGGTTTACAGAAAGAAGAAAA--AAATCAACATGTTATTAATCATTTAAAGATCATTTTAAAATTTTTGACCTTTATATTTTAATGAATAAAATATTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCATCCAGTATTTCTTTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTACGTTTATCTGGGTTTTGAAAAGTGATGTTTCCTAATATGAGAAAGCCATTTACATTTTTAAATCTACAAAGGCAAATGGAATGGTACTAAATTATTTACATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTTCTACAGAGTTGGGGATATGCAGTCCTAGAATATTCCTGGGAGCTAATCCTTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTAAACTTTCAAATTATCCAGGTGATGGGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCCCTGTTCATTGGGTAAT--GTTATCATTCTTAACTTCTCATACTCAAAATGTCCTTTAATTTTTAATTTTTGATAGTCATATCATTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAAAATAATTTTGAAACAGGAGAAAGTATTCTTTATTACTATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGATGACGCCCTTCACCCTATCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTATTCTTTAGAAAAATCTTCTCTGTGCCTTATAAAGAATATGATTGTTGGCATTCAAAAGCCAGCGAAGTATACATTATTAGCCTGTTGCCTAACTCATTTCTTTAAGAAACTACACTAATTACCCACATACTTATGTTTTTATTTCCTCATTATTTCTGGAGAAAACAAATACTGCTAACATGATATTTGTAAGAGAGAAAAAAGTCTTTTCTTGAAAAGTGCTGTCATTGTAGTACTAACTTATAGTATCAACTTCTTTATCAACTCCTTATACACTGTTTATTCTGACAGAAATAAAAAAGCTAAAAGTGAAATGACTTTTTTAACTCTCCATATTATAAGAACCCATCTTTGTAATTTAAGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCTAGGTTACAAAATAAAAAGTATTTTGTCTCCTTGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGATCTCAGTATTCTGAAATAATATGTTTACTATCTTTTGATAAGCATTTAAAATATTAGATTTATTGTTACTCTTATGCCTTCATTGGGCTGGAAGAATAATTGTT i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 1565 1554 + 57002 TACAGATGAATATGCACTTTAAACACTCTTAGTTGCTTTCTTAATTTTATATCTGCTGCTTTATGCTTCTGTTTATTTTCATTCTTTCCAATGTCCACATTCTAGTAAATTTGAGTATTTTAATCCAAGTTTATATACTATTTAATATTGCTTGCATAGTTTAGTATTGTTAAGACTCAAAAAGGTTTACAGAAAGAAGAAAA--AGATCAACATGTTATTAATCATTTAAAGATCATTTTGAAATCTTTGACCTTTATATTTTAATGAATAAAATATTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCATCCAGTATTTCTTTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTATGTTTACCT-GGTTTTGAAAAGTGATGTTTCCTAATATGAGAAAGCCATTTACATTTTTAAATCTACAAAGGCAAATGGAATGGTACTAAATTATTTACATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTCCTACAGAGTTGGGGATAGGCAATCCTAGAATACTTCTGGGAGCTAATCCTTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTAAACTTTCAAATTATCCAGGTAATGGGCCTGTCTTTTAATTCAATGGATATGGAGCATAATGAATTATCCCCTGTTCATCGGGTAATAAGTTCTCATTCTT-ATTTATAATACTCAAAATGTCCTTTAATTTTTAATTTTTGATAGTCATATCATTATCCCTAGGTATTTTAGCTTCTATCTTAAATTCTAAAATAATTTGGAAACAGGAGAAAGTATTCTTTATTACTATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGGTGACGCCCTTCACCCTATCCATATTGTCACTACCAAGTGGTGATTACTTTTCAGGTTCACATACTTATTCTTTAGAAAAATCTTCCCTGTGCCTTATAAAGAATATGATTGTTGGCATTCAAAAGCCAGCGAAATATACATTATTAGCCTGTTGCCTAACTCATTTCTTTAAGAAACTACACTAATTACCCACATACTTATGTTTTTATTTCCTCATTATTTCTGGAGAAA--AAATACTGCTAACATGATATTTGTAAGAGAGAAAAAAGTCTTTTCTTGAAAAGTGCTGTCATTGTAGTACTAACTTATAGTATCAACTTCTTTATCAACTCCTTATACACTTTTTATTCTGAGAGAAATAAAAAAGCTAAAAGTGAAATGACTTTTTTAACTCTCCATATTATAAGCACCCATCTTGGCAATTTAGGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCGAGGTTACAAAATAAAAAGTATTTTGTCTCTTTGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATTGAACTCAGTATTCTGAAATAATGTGTTTACTATCTTTTGATAAGCATTTAAAATATTAGATTTATTGTTACTCTTCTGCCTTCATTGGGCTGGAAGAATAATTGTT i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chr7b 114485518 1550 + 115148730 TACAGATGAATATGTACTTTAAACACTCTTAGTCGCTTTCTTAATTTTATATCTGCTGCTTTATGCTTCTGTTTATTTTCATGCTTTCCAATGTCCACATTCTAGTAAATTTGAATATTTTAATCCAAGTTTATATACTATTTAACATTGCTTGTATAGTTTAGTATTTTTAAGACTCAAAAAGGTTTACAGAAAGAAGAAAAAGAGATCAACATGTTATTAATCATTTAAAGATCATTTTAATATCTTTGACCTTTATATTTTAATGAATAAAATGTTAGTAGTTATTAGTATAAAATAATTTATGTCTTTTGGACTTAGCCTCCAGCATTTCTTTTTTAATAAAGAAAATAATTATTCTCTTGCAATATACTATGTTTATCTGGGTTTTGAAAAATGATGTTTCGTAATATGAGAAAGCCATTTACACTTTTAAATCTACAAAGGCAAATGGAATGGTACTAAATTATTTCCATAATAATGTTTAGATGGTGGCCCTTATAACATTCTTTCTATACTTCCTACAGAGTTGGGTATATGCAATCCTAGAATATTTCTGGGAGCTAATCATTTAGCTTGATGAATGAAACAAGACTTTTAAATAAAATTGAACTTTCAAATTATCCAGGTAACAGGCCTGTCTTTTAATTCAATGGATATGGAGCGTAATGAATTATCCCCTGTTCATTGGGTAGTAAGTTCTCATTCTTAACCTATAATACTCAAAATGTCCTTTAATTTTTAATTTTTGATAGTCATATCATTATCCCTGGGTATTTTAGCTTCTATCTTAAATTCTAAAATAATGTTGAAACAGGAGGAATTATTCTTTGTTACCATATGTATTAAACATCATGGTTTTCAAATTTAACTGCAAATGTATCTTTTCATTGCTTCTTGATGACACCCTTCACCCTATCCATATTGTCACTACCAAGTGATGATTACTTTTCAGGTTCACATACTTGTT-TTTGGAAAAATAT---CTGTGCCTTATAAAGAATATGAGTGTTGGCATTCAAAAGCCAGTGAAGTATACATTATTAGCCTGTTGCCTAACTCATTTCTTTA--AAACTACACTAATTACCCACATACTCATGCTTTTATTTCCTCATTATTTCTGGAGAAAACAAATACTGCTAACACGATATTTGTAAGAGAGAAAAAAGTATTTTCTTGGAAAGTGCTGTCATTGCAGTATTAACTTATAGTATCAACTTCTTTATAAACCCCTTATACACTTTTTATTCTGAGAGAAATAAAAAAGCTAAAAGGGAAATGAGTTTTTCTACTCTCCATATTATAAGCACCCATCTTGGTAATTTAGGGTCTTTATAGTTAGGGTAAGTTGTGTCATACCGAGATTACAAAATAAAAAGTATTTTGTC----TGGGCCTTTCCTTATTCAGTAATACTGTCAGTTTGGCTTTTTTTGTAGGTCAACTTATGGATCTCAGTATTCTGAAATAATATGTTTACTATCTTTTGATAAGCATTTAATATTTTAGATTTATTATTACTCTTCTGCCTGTATTGGGCTGGAAGAATAATTGTT i nomLeu3.chr7b C 0 I 2 e ponAbe2.chr2a_random 9011996 1553 + 13868332 I a score=1910.000000 s hg38.chr14_KI270725v1_random 42141 2 + 172810 TC s panTro5.chr22 3807187 2 + 37823149 TC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 3119 2 + 57002 TC i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chr2a_random 9013549 2 + 13868332 TC i ponAbe2.chr2a_random I 1553 I 428 s nomLeu3.chr7b 114487070 2 + 115148730 TC i nomLeu3.chr7b I 2 C 0 a score=207601.000000 s hg38.chr14_KI270725v1_random 42143 422 + 172810 TC--ACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCAGAGAAACTTGACTATTTCCTGCAATTTTAAAGTGTATATTGAATA----AAACCATC-TTTTTATTTTCTTTTTT-GCTCACTGGCAAATATTAACAATATCAAGTGTGTTATTATAATGTTATCTAGTTAA----AAATCTCAAAAAGTTTTCATAATTACCATTTACAAATATATAAATAGGTGACCTAATGTTAATTTTTATTGTCTGAGACCAtgtctgttatttcactctttaaattcagttagtaatgcagaacctagcacttagta----ctcaaaaattatgtgctggataaaAAAAGGTTAAACATGTAATATATACAAAATGTACTGGAAAAA-ATGCACCAAACAATTTTGTTATACCAGTTTAATGTA s panTro5.chr22 3807189 428 + 37823149 TCTCACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCCGAGAAACTTGACTATTTCCTGCAATTTTAAAGTGTATATTGAATA----AAACCATA-TTTTTATTTTCTTTTTT-GCTCACTGGCAAATATTAACAATATCAAGTGTGTTATTATAATGTTACCTAGTTAA----AAATCTCAAAAAGTTTTCATAATTACCATTTTAAAATATATAAATAGGTGACCTAATGTTAATTTTTATTGTCTGAGACCAtgtctgttatttcactctttaaattcagttagtaatgcagaacctagcacttagtagatacacaaaaattatttgctggataaaaaaaGGTTAAACATGTAATATACACAAAATGTACTGGAAAAA-ATGCACCAAACAATTTTGTTATACCAGTTTAATGTA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 3121 429 + 57002 ----ACTCCACAAAAGCCAAGTTGCAGAGAAAAACACATAGACATTCAACTGCAAAGCAGAGAAACTTGACTATTTTCTGCAATTTTAAAGTGTATATTGAATA----AAACCATCTTTTTTATTTTCTTTTTTGGCTCACTGGCAAATATTAACAACATCAAGTGCGTTATTATAATGTTATCTAGTTAAAAATAAATCTCAAAAAGTTTTCATAATTACCATTTAAAAATATATAAATAAGTGACCTAATGTTAATTTTTATTGTCTGAGACCAtgtctgttatttcactctttaaaatcagttagtaatgcagaacctagcacttagtagatactcaaaaattatttgctgaataaaAAAAGGTTAAACATGTAATATACACAAAATGTACTGGAAAAA-ATGCACCAAACAA-TTTGTTATACCAGTTTAATGTA i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chr7b 114487072 430 + 115148730 --TCACTCCACAAAAACCAAGTTGCAGAGAAAAACACATAGACCTTCAACTGCAAAGCAGAAAAACTTGACTATTTTCTGCAATTTTAAAGTCTATCTTGAATAAATTAAACCATC-TTTTTATTTTCTTTTTT-GCTCACTGGCAAATATTAACAACATCAAGTGTGTTATTATAATGTTATCTAGTTGA----AAATCTCAAAAAGTTTTCATAATTACCATTTTAAAATATATAAATAGGTGACCTAATGTTAATTTTTATTGTCTGAGACCATGTCTGTTATTTCACTCTTTAAATTCATTTGGTAATGcagaacctactacttagtagatactcaaaaaatatttgctgaataaaAAAA-ATTAAATATGTAATATATACAAAATGTACTGGAAAAATATGCACGAAACAATTTTGTTACACCAGTGTAATGTA i nomLeu3.chr7b C 0 C 0 e ponAbe2.chr2a_random 9013551 428 + 13868332 I a score=600.000000 s hg38.chr14_KI270725v1_random 42565 1 + 172810 G s panTro5.chr22 3807617 1 + 37823149 G i panTro5.chr22 C 0 C 0 s ponAbe2.chr2a_random 9013979 1 + 13868332 G i ponAbe2.chr2a_random I 428 N 0 s nomLeu3.chr7b 114487502 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 e gorGor5.CYUI01002012v1 3550 0 + 57002 C a score=129808.000000 s hg38.chr14_KI270725v1_random 42566 256 + 172810 AATATTGCCTTTAAAAGATAATATAGTTTTCAGGTGTCTACAGTGATTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGAGGAAATATACTCtctaaattctagatttataatttagggtttaaattataaaatcATTAAATAAGATACAAGTGAAATATAGTCAAATATCCCCTTGGAAAAAAATTAAGTGGCCTTTAAAGTGAGGTATTCATATATGTAATTTTACAATCCTC s panTro5.chr22 3807618 255 + 37823149 AATATTGCCTTTAAAAGATAATATAGTTTTCAGGTGTCTACAGTGATTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGAGGAAATATACTttctaaattctagatttataatttagggtttaaattataaaatcATTAAATAAGACAAAAGGGAAATATAGT-AAATATCCCCTTGGAAAAAAATTAAGTGGCCTCTAAAGTGAGGTATTCATATATGTAATTTTACAATCCTC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 3550 255 + 57002 AATATTGCCTTTAAAAGATAATATAGTTTTCAGGTGTCTACAGTGATTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTG-GGAAAtatactttctaacttctagatttataatttagggtttaaattataaAATCATTAAATAAGACACAAGTGAAATATAGTCAAATATCCCCTTGGAAAAAAATTAAGTGGCCTCTAAAGTGAGGTATTCATATATGTAATTTTACAATCCTC i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chr7b 114487503 256 + 115148730 AATATTGCCTTTGAAAGATATTACAGTTTTCAAGTGTCTACAGTGACTTTGTAATATTTGTGCACATATAAAATAATATTTCCAAAAATGTAATCCAGTGAGGGAATATACTttctaaattctagatttataatttgaggtttaaattataaaatcATTAAATAAGATGCAAGTGAAATGTAATCAAATATCCCCTTGGAAAAAAATTAAGTGGCCTCTAAAGTGACGTACTGATATATGTAATTTTGCAATCATC i nomLeu3.chr7b C 0 I 44409 a score=826754.000000 s hg38.chr14_KI270725v1_random 42822 3163 + 172810 TAGTGATAGAATTAATTAAATATGCCACCAAATTGATTAATTCCTACAGTGTTAAAAGAGAAGCACTAACAATACCAGTGACCATGTAACATGGATTTAAGCTACAAGTCATAGAAATGTGACGAGAAGCCTCAGCGCTGTAAAACAGAGGGTGGAAGAAAGCTTTTCCTCTCTCAAATGAGCTTTGCGAGGTATACTTCTTGAAGGATAGGAAGTTGAAGTGTTCAGGACTTTTATGTCTATTCTACTTTGCCTTAGTTTACATGATTCTTAGTTTATTAGCCTAGAAATGGCCAAGAAAACTTAAGGCTCAATAATTAGTTATAAATATGAAATATCCCCAATTTTTAAGATAAAAACAACTTATAAATGTATTTGTCTGTAAAAATTGTGTATATTTTTATAGAACATCTATTTCT----TTTTTTCttttttaatt-tttttattatactttaaattctagggtacacatgcacaatgtgcaggtttgttgcatatgtatacatgtgccatgttggtgggctgcacccattaactcatcatttatattaggcatatctcctaatgctatacctcccccctccccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgattgtttccagcttcctccatgtccatacaaaggacatgaactcatcattttttatggatgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcatttttggacatttgtgttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcaacatgatttataatcctttgggtatatgcccagtactgggatggctgggtcaaatggtatttctagttctagatccctgaggaatggccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggGTCTATTTCTTTAAAACAAAGGGAGGGGAGTCTCTCATTTACATTAGTTTTTTTCATAGCCTTTTGGACTTTGCAATTTCTATGTTTTGGAACCTATTTCTTACAGTTTTTCTATGCTAAACTCTGTCCTGGTCAGTTCCAGAGTGTATGAAGAACAAAATGATGTAATTGTATGTGACCTGGCTGTAGTGGAACAAATTTGACTCTTAAGTATGCAGGCTCTAATTTTCCTGTCTGGTTTTGGTAAGTATTCCTTACATAGGTTTTTTCTTTGAAAATCTGGGATTGAGAGGTTGATGAATGAAAATTAATCCTTTCACTTTGTTGTATATAAGTTTGCAATAATTAGGTCAGAGTGGAGTTTTAAGGTCACGAAGGAGGCTGATGACTTACAAATAATGGGCTCTGATTGGGCAACTACTCATCTGAGTTCCTTCCATTTGACCTAATTAAGCTTATGAAATTTACACTAAGCCATGAGCTCATCTTTAAAAAGTCTTATTAAAAGATTTTCAGCTGTTCCAAATGGGACTTATTAGTGGAATGTGTTTTAAAGGATCATATGAGATGAATGAAAGGTATTTGATCCTTTCTTTCCATAATAATAAAATGATGGTTTGGAAAAAGAGGCTACAGTCTAACCACAGTGCTATTATTAGGCTTTCTTGTTAAACATAGGTCTAAGCCTAAGTATGTCAATACAACAAATACTTACTGTTTCATTTCTAGTAATGAAAAAAAAaaaacaagtctttctggcataaggatgattttcatctggttattttgaaacatttttgtaaaataagtttacatctataaagaatatttttatttgtaaggaggggtatgtctctgtgcactggaagagagggaggactaaatcactgggaagtcttatgataaagaagccattggcttaaatcagcaaagcaagccatcccttggtttaaggtgtttttcctggccatcctgtcttgactagaactttacctacacattcctttttggtttaggcaaattatagtatctaaacctgaagtctcagctctgtgtctttgagatAtaaattttctaccatgtcttctctggaacctgataactatctatctctttaaaatgcaagtctagggagatgactcatcagaaaaagaagaaaa---aggtatttggaaattgtgcaaattaaaGCAGCCCATGATGCCAAAGTCTACACATTCCTGAGTGAGTCAGTTCTGGCCAGTTCTAGCTGGATCAAGAGAGCTCTGCTGGGCAGGCCTGAAGAGCAGCTGGATGGCAGACACCTGAGGAGCCAGGTGCCTGAAATTTCCTCCACCTGCTTGAGGAGCGCCAAAGCTCAGGTGCTGGCTAGACAACCCCTTCTGGCTGCCTAAGCAGATGGAAGAGGAAGGAAAAAAGGTCAGAGGCAGAGTGTTGAACCCTGCCTCCCAGGTGGGTGGAAGATGCCTGTCGCCAAACTAGGGCCCAGCTTACCGGGTGAGATGGGTGAACTGGTGATCTCCCGAGAGAGTGGACGTCAGAACTACATGGTCCTGGACTTCACCTAGGCCAGTGAAGGAGAGAGAGGATTAATGTTAACTGCAGGAGGCCCACTCTAGCCTTAAATTTTGTAATTCAAACCCTTTCCTTGGAGACAAAACAAACATGACAAGGAATTCTGAGGTCAGGGGACAAGAATCACAAGTTCCCCAGTGGGAGACTGAGGAGGCAGTGTCCTTTCTGCCCTTGGTCTACTGGCTAAGAACCTTCCTCAGCCTGACCTTTCCACATTGCACTTTCAGCTCTGTTTGCAATTTTCCTCCTGAGGGATTCCTGCTGAGGGAATCCCAGTGTTCGATACTGAAATCTATACGTTCCTAATGGGTGGTTAAAAAAAAAAACCTCAGCAAGAGAAGCAGAAAATGTTTCCTCTTCCTGAAAAACTGTAGAAAGGCAGGCACCATTCTGGGTG-GGACATGGTCCTTGCAAAA s panTro5.chr22 3807873 3149 + 37823149 TAGTGATAGAATTAATTAAATACACCACCAAATTGATTAATTCCTCCAGTGTTAAAAGAAAAGCACTAATAATGCCAGAGACCATGTAACATGGATTTAAGCTACAAGTCATAGAAACGTGATAAGAAGCCTCAGCGCTGTAAAACAGAGGGTGGAGGAAAGCTTTTCCTCTCTCAAATGAGCTTTGCGAGGTATACTTCTTGAAGAATAGGAAGTTGAAGTGTTCAGGACTTTTATGTCTATTCTACTTTGGCTTAGTTTACATGATTCTTAGTGTATTAGCCTAGAAATGGCCAAGAAAACTTAAGGCTCAATAATTAGTTATAAATATGAAATATCCCCAGTTTTTAAGATAAAAACAACTTATAAATGTATTTGCCTGTAAAAATTGTGTATATTTTTACAGAACATCTATTTCTCTCTTTTTTTAttttttatac-tttttattatactttaaattctagggtacacaagcacaatgtgcaggtttgttgcatatgtatacatgtgccatgttggtgtgctgcacccattaactcatcatttatattaggcatatctcctaatgctatccctcccccctccccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggtttttcgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggatgcatagtattccgtggtgtatatgtgccacattttcttaatccagtctatcatttttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtagtgggatggctgggtcaaatggtgtttctagttctagatccctaaggaatggccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttt-aatgattgccattctaactggt----------atctcattgtggttttgatttgcatttctctgatggGTCTATTTATTTAAAACAAAGGGAGGGGAGTCTC--ATTTACATTAGTTTTTTTCATATCCTTTTGAACTTTGCAATTTCTATGTTTCAGAACCTATTTCTTACAGTTTTTCTATGCTAAACTCTGTCCTGGTCAGTTCTAGAGTGTATGAAGAACCAAATGATGTAATTGTATGCCACCTGGCTGTAGTGGAACAAATTTGACTCTTAAGTATGCAGGCTCTAATTTTCCTGTCTGGTTTTGGTAAGTATTCCTTACATAGGTTTTTTCTTTGAAAATCTGGGATTGAGCGGTTGATGAATGAAAATTAATCCTTTCACTTTGTTGTGTATAGGTTTGCAATAATTAGGCCAGAGTGGAGTTTTAAGGTCATGGAGGGGGCTGATGACTTGCAAATAATGGGCTCTGATTGGGCAACTACTCATCTGAGTTCCTTCCATTTGACCTAATTAAGCTTGTGAAATTTACAGTAAGCCATGAGCTCATCTTTAAAAAGTTTTATTAAAAGATTTTCAGCTGTTCCAAATGGGACTTATTAGTGGAATGTGTTTTAAAGGATCATATCAGATGAATGAAAGGTATTTGATCCTTTGTTTCCTTAATAATAAAATGATGGTTTGAAAAAATAGGCTAGAGTCTAACCACAGTGCTATTATTAGGCTTTCTTGTTAAACATAGGTCTAAGCCTATGTATGTCAATACAACCAATACTTACTGTTTCATTTCTAGTAATGAAAAAAAAaaaagaagtctttctggcataaggatgattttcatctggttattttgaaacatttttgtaaaataaatttccttctataaagaacatttttatttgtaaggaggggtatgtctctgtgcactggaagagagggaggactagatcactggcaagtcttatgataaagaagccattggcttaaatcagcaaagcaagccgtcccttggtttaaggtgtttttcctggccatcctgtcttgactagaactttacctacaccttcctttttggtttaggcaaattatagtatctaaacctgaagtctcggctctgtgtttttgagatACAaatgttctaccatgtcttctctggaacctgataactatctatctctttaaaatgcaagtctagggagatgactcatcagaaaaagaagaaaaaagaggtatttggaaattgtgcaaattaaaGCAGCCCCTGATGCCAAAGTCTACACATTCCTGAGTGAATCAGTTCTGGCCAGTTCTAGCTGGATCAAGACAGCTCTGCTGGGCAGGCCTGAAGAGCAGCTGGATGGCAGACACCTGAGGAGCCAGGTGCCTGAAACTTCCTCCACCTGCTTGAGGAGCACCAAAACCCAGGTGCTGGCTGGACAACCCCTAGTGGCTGCCTAAGCAGGTGGCAGAAGAAGGAAACAAGGTCAGAGGCAGAGTGTTGAACCCTGCCTCCCAGGTGGGTGGAAGATGCCTGTCGCCAAACTAGGGCCCAGCTTGCCAGGTGAGGTGGGTGAACTGGTGATCCCCCGAGAGAGTGGACGTCAGAACTACATGTTCCCGGACTTCACCTCGGCCAGCGAAGGAGAGAGAGGGTTAATGTTAACTGCAGAAGGCCCACTCTAGCCTTAAATTCTGAAATTCAAACCATTCCCTTGGAGACAAAACAAACATGACAAGGAATTCTGAGGTCAGGGGACAAGAATCACAAGTTCCCTAGTGGGAGACTGAGGAGGCAGTGTCCTTCCTGCCCTTGGTCTACTGGCTAAGAACCTTCCTCAGCCTGACCTTTCCACATTGCACTTTCAGCTCTGTTTGCAATTTTCCTCCT------TTAGTGCTGAGGGAATCCCAGTGTTCGATTCTGAAATCTGTATGTTCCTAATGGGTGGTT---AAAAAAAACCTCAGCAAGAGAAGCAGAAAATGTTTCCTCTTCCTGAAAAACTGTAGAAAGGCAGGCACCATTCCGGGTGAGGACATGGTCCTTGCAAAT i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 3805 3148 + 57002 TAGTGATAGAATTAATTAAATATGCCACCAAATTGATTAATTCCTACAGTGTTAAAAGAGAAGCACTAACAATGCCAGTGACCATGTAACATGGATTTAAGCTACAAGTCATAGAAATGTGATGAGAAGCCTCAGCACTGTAAAACCGAGGGTGGAGGAAAGCTTTTCCTCTCTCAAATGAGCCTTGCGAGGTATACTTCTTGAAGGATAGGAAGTTGAAGTGTTCAGGACTTTTATGTCTATTCTACTTTGGCTTAGTTTACATGATTCTTAGTTTATTAGCCTAGAAATGGCCAAGAAAACTTAAGGCTCAATAATTAGTTATAAATATGAAATATCCCCAATTTTTAAGATAAAAACAACTTATAAATGTATTTGTCTGTAAAAATTGTGTATATTTTTACAG-ACatctatttctttc-ttttttattttttatatatattttttatactttaaattctagggtacacatgaacaatgtgcaggtttgttgcatatgtatacatgtgccatgttggtgtgctgcgcccattaactcatcatttatattaggcatatctcctaatgctatctct-ccccctccccccaccccacaacaggccctagtgtgtgatgttccccttcctgtgtccaagtgttctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctagaaaggacatgaactcatcattttttatggacgcatagtattccatggtgtatatgtgctacgttttcttaatccagtctatcatttttgaacatttgggttggttccaagtctttgctactgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtagtgggatggctgggtcaaatggtatttctagttctagatccctgaggaatggccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtgaaagtgttcctatttctccacatcctctccatcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatgggtctatttctttaAAACAAAGGGAGGGGAGTCTCTCATTTACATTAGTTTTTTTCATAGCCTTTTGGACTTTGCAATTTCTATGTTTTGGAACCTATTTCTTACAGTTTTTCTATGCTAAACTCTGTCCTGGTCAGTTCCAGAGTGTATGAAGAACCAAATCATGTAATTGTATGTGACCTGGCTGTAGTGGAACAAATTTGACTCTTAAGTATGCAGGCTCTAATTTTCCTGTCTGGTTTTGGTAAGTATTCCTTACATAGGTTTTTTCTTTGAAAATCTGGGATTGAGAGGTTGATGAATGAAAATTAATCCTTTCACTTTGTTGTATATAGGTTTGCAATATTTAGGTCAGAGTGGAGTTTTAAGGTCATGAAGG-GGCTGATGACTTACAAATAATGGGCTCTGATTGGGCAACTACTCATCTGAGTTCCTTCCATTTGACCTAATTAAGCTTGTGAAATTTACACTAAGCCATGAGCTCATCTTTAAAAAGT-TTATTAAAAGATTTTCAGCTGTTCCAAATGGGACTTATTAGTGGAATGTGTTTTAAAGGATCATATGAGATGAATGAAAGGTATGTGATCCTTTCTTTCCTTAATAATAAAATGATGGTTTGGAAAAATAGGCTACAGTCTAACCACAGTGCTATTATTAGGCTTTCTTGTTAAACATAGGTCTAAGCCTAAGTATGTCAATACAACAAATACTTACTGTTTCATTTCTAGTAATAAaaaaa-------aagtctttctggcataaggatgattttaatctggttattttgaaacatttttgtaaaataaatttacatctataaagaacatttttatttgtaaggaggggtatgtctctgtgcactggaagagagggaggactaaatcactgggaagtcttatgataaagaagccattggcttaaatcagcaaagcaagccatcccttggtttaaggtgtttttcctggccatcctgtcttgactagaactttacctacaccttcctttttggtttaggcaaattatagtatctaaacctgaagtctcagctctgtgtctttgagatATAAATGTTCTACCACGTGTTCTCTGGAACCTGATAACTA-ctatctctttaaaatgcaagtctagggagatgactcatcagaaaaagaagaaaaaagaggtatttggaaattgtgcaaattaaaGCAGCCCCTGATGCCAAAGTCTACACATTCCTGAGTGAGTCAGTTCTGGCCAGTTCTAGCTGGGTCAAGAGAGCTCTGCTGGGCAGGCCTGAAGAGCAGCTGGATGGCAGACACCTGAGGAGCCAGGTGCCTGAAACTTCCTCCACCTGCTTGAGGAGCACCAAAGCCCAGGTGCTGGCTGGACAACCCCTTCTGGCTGCCTAAGCCGGTGGCAGAGGAAGGAAAAAAGGTCAGAGGCAGAGTGTTGAACCCTGCCTCCCAGGTGGGTGGAAGATGCCTGTTGCCAAACTAGGGCCCAGCTTGCCGGGTGAGGTGGGTGAACTGGTGATCCCCCGAGAGAGCGGACGTCAGAGCTACATGGTCCCAGACTTCACCTCGGCCAGTGAAGGAGAGAGAGGGTTAATGTTAACTGCAGGAGGCCCACTCTAGCCTTAAATTCTGTAATTCAAACCCTTCCCTTGGAGACAAAACAAACATAACAAGGAATTCTGAGGTCAGGGGACAAGAATCACAAGTTCCCTAGTGGGAGACTGAGGAGGCAGTGTCCTTTCTGCCCTTGGTCTACTGGCTAAGAACCTTCCTCAGCCTGACCTTTCCACATTGCACTTTCAGCTCTGTTTGCAATTTTCCTCCT------TTAGTGCTGAGGGAATCCCAGTGTTCGATCCTGAAATCTATACGTTCCTAATGGGTGGTT---AAAAAAAACCTCAGCAAGAGAAGCAGAAAATGTTTCCTCTTCCTGAAAAACTGTAGAAAGGCAGGCAACATTCTGGGTG-GGACAT-GTCCTTGCAAAA i gorGor5.CYUI01002012v1 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=1353.000000 s hg38.chr14_KI270725v1_random 45985 3 + 172810 GTC s panTro5.chr22 3811022 3 + 37823149 GTC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 6953 3 + 57002 GTC i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27964539 3 + 137757926 gtt i macFas5.chr11 N 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=3040.000000 s hg38.chr14_KI270725v1_random 45988 5 + 172810 TTTAT s panTro5.chr22 3811025 5 + 37823149 TTTGT i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 6956 5 + 57002 TTTAT i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27964542 5 + 137757926 ttttt i macFas5.chr11 C 0 C 0 s saiBol1.JH378123 17697348 5 + 29834108 ttTTT i saiBol1.JH378123 N 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=1930.000000 s hg38.chr14_KI270725v1_random 45993 2 + 172810 GG s panTro5.chr22 3811030 2 + 37823149 GG i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 6961 2 + 57002 Gt i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27964547 2 + 137757926 gg i macFas5.chr11 C 0 C 0 s rhiRox1.KN298137v1 1802957 2 + 3333280 gg i rhiRox1.KN298137v1 N 0 N 0 s saiBol1.JH378123 17697353 2 + 29834108 GG i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=14217.000000 s hg38.chr14_KI270725v1_random 45995 34 + 172810 ttttt----ttttttattttgagatgaagttttgctct s panTro5.chr22 3811032 38 + 37823149 ttttttttgtttttttttttgagatgaagttttgctct i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 6963 36 + 57002 ttttttt--ttttttattttgagatgaagttttgctct i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27964549 33 + 137757926 -cttt----tttttttttttgagatagtgtcttactct i macFas5.chr11 C 0 C 0 s saiBol1.JH378123 17697355 33 + 29834108 -ttttgttttgtttttttctgagac--agtctgact-- i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=30705.000000 s hg38.chr14_KI270725v1_random 46029 35 + 172810 tgttgcccagactggagtgcagtggcataatctct s panTro5.chr22 3811070 35 + 37823149 tgttgcccagactggagtgcagtggtgtgatctct i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 6999 35 + 57002 tgttgccccggctggagtgcagtggtgtgatctct i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27964582 34 + 137757926 -gttgccgacgctggaacgcaatggtgggattcca i macFas5.chr11 C 0 C 0 s colAng1.NW_012115777v1 2188285 35 - 5424790 tgttgcccaggctggaacgcaatggtaggatccca i colAng1.NW_012115777v1 N 0 C 0 s saiBol1.JH378123 17697388 34 + 29834108 -gttgcataggctggaatgcagtggttggatacca i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=954893.000000 s hg38.chr14_KI270725v1_random 46064 220 + 172810 gctcactgcaacctctgcctcctgggttcaagcaattctcctacctcagcctcccgagtagctggaattacaggcacctgccaccatacctggctaattttttgtatttttagtagagatggagttttgccatgttggccatgttggcctcgaactcctgacctcaagtgagccacccgcttctgcctcccaaagtgctgg----gattacaggcgtgagtcac s panTro5.chr22 3811105 220 + 37823149 gctcattgcaacctccgcttcctgggttcaagcaattctcctacctcagcctcctgagtagctggaattacaggcacctgacagcacacctggctaattttttgtatttttaatagagatggggttttgccatgttggccatgttggtctcgaactcctgacctcaagtgagccacccgcttctgcctcccaaagtgctgg----gattacaggagtgagccac i panTro5.chr22 C 0 n 0 s gorGor5.CYUI01002012v1 7034 220 + 57002 gctcactgcaagctctgcctcctgggttcaagaaattctcctacctcagcctcccgagtagctggaattacaggcacctgccaccatacctggctaattttttgtatttttagtagagatggagttttgccatgttggccatgttggtctcgagctcctgacctcaagtgagccacccgcttctgcctcccaaagtactgg----gattacaggcgtgagtcac i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28278436 219 + 133663169 gctcactgcaacctctgcctcccaggttcaagcgattctcccatctcagcctcccgagtagctgggattacaggcatgcaccaccacacctggctaa-tttttgtatttttagtagagatggggttttgccacattggccaggctggtctcgagctcctgacctcaggtgacccgcccacctcagcctcccaaagttctgg----gattacaggcgtgagtcac i rheMac8.chr11 N 0 C 0 s macFas5.chr11 27964616 219 + 137757926 gctcactgcaacctctgcctcccaggttcaagcgattctcccatctcagcctcccgagtagctgggattacaggcatgtaccaccacacctggctaa-tttttgtatttttagtagagatggggttttgccacattggccaggctggtctcgagctcctgacctcaggtgacccgcccacctccgcctcccaaagttctgg----gattacaggcgtgagtcac i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5793538 219 + 7948249 gctcactgcaacctctgcctcccaggttcaagcgattctcccatctcagcctcccgagtagctgggattacaggaatgcaccaccacacctggctaa-tttttgtatttttagtagagatggggttttgccacattggccaggctggtctcgagctcctgacctcaggtgacccgcccacctcggcctcccaaagttctgg----gattacaggcgtgagtcac i macNem1.NW_012011422v1 N 0 C 0 s cerAty1.NW_011999477v1 1668986 219 + 10730278 gctcactgcaccctctgcctcccaggttcaagcgattctcccatctcagcctcccgagtagctgggattacaggcatgcactaccacagctggctaa-tttttgtatttttagtagagatggggttttgccacattggccaggctggtctcgagctcctgacctcaggtgacccgcccacctcggcctcccaaagttctgg----gattacaggcgtgagtcac i cerAty1.NW_011999477v1 N 0 C 0 s chlSab2.chr11 26999853 219 + 128539186 gctcattgcaacctctgcctcccgggttcaagcgattctcccatctcagcctcccgagtagccgggatgacaggcatgcaccaccacacctggctaa-tttttgtatttttagtagagatggggtttcgccacgttggccaggctggtctcgagctcctgacctcaggtgacccgcccacctcggcctcccaaagttctgg----gattacaggcgtgagtcac i chlSab2.chr11 N 0 C 0 s manLeu1.NW_012107430v1 1155264 219 - 1713548 gctcactgcaacctctgcctcccaggttcaagcgattctcccatctcagcctcctgagtagctgggattacaggcatgcactaccacagctggctaa-tttttgtatttttagtagagatggggttttgccacattggccaggctggtctcgagctcctgacctcaggtgacccacccacctcggcctcccaaagttctgg----gattacaggcgtgagtcac i manLeu1.NW_012107430v1 N 0 C 0 s colAng1.NW_012115777v1 2188320 219 - 5424790 gttcactgcaacctctgcctgccgggttcaagcgattctcccatatcagcctcctgagtagctgggattacaggcatgcaccaccacacctggctaa-tttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcgagctcctgacctcaggtgacccacccaccttggcctcccaaagttctgg----gattacaggtgtgagtcac i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17697422 205 + 29834108 gctcactgcaacttctgcctctcgggt------------------tcagcctcctgagtagctgggattacaggcatgcaccaccatggctggctaa-tttttgtattttaagtagagatgaggtttcaccatgatggccaggctggtcttgaaatcctgacctcaggcgatccaccctccttagcctcccaaagtgctgggattgattacaggcatgagtcac i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=5712670.000000 s hg38.chr14_KI270725v1_random 46284 1481 + 172810 tgtgcccggccAAGATTCTGTTTTGATAGAACAC-TTGAGTCTCTCTCACCTTGTATTTAGAGAAGTTAGAAAGTAAAagataatgtatatagaaagctttttgaaaactcttaagaacttcataaatatggggcactatgactaCGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGACTCAGTGAGATTGGGTGATTTAGGTAGTGTCATTTTATGAACAAGGGGTACCCTACTCAGTTCTTTTATTTTATTATACTTCTCTTTGACATTCACTCCAGTGAAAGAACTCTTTCAAAAGACA-TCATGCCTGGTCTCACAGAGATTCAAAGGTGTTTGAGTCCTTCCTTATTATGCCCTTGGAAGATGCTTTGAGGACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGAATAGGGCACCTCATCACTCTGGTGTTAACCCTGAAGGGCCTTCATAATAATGTGCTTAAAAGAGTCCCCTATTATGTCCTTCAGGATGGAGCTTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGGAACTGAAGTTGGTCATTTCTCACTGGAtcagtcaacaaggtttgagtactttctgtgtgctctgcatcattctgagt----------acagaataaggcatggctcctgccttcaaggagtatggaatttaatagacgatgacaACATACATGATTGTAAATCTATCTACATGAGAGTGAATAATTGTGAGATTCCTAATAAACGGCAAGATATGTTCTGAAAATGTGAAACATAAATGAGGTTGAAGAAATTGTGAAAGGTTTAGCAGAGGAGGAATAATTCGTCAGGTTCTTTAAATACAAGTAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTGGATTATGGTATGTCTTCTCGTTGATGAGGGTGGAGACTGGCGAATAGTGGAAAATA--AAGTTAAATAGTTAGGGTGGGGCCAAATTATGGGTTTTAATAAAAGCCAGACATAGAAATTTAGATTGGGGTGGTAGAAAAATGAAGGCTTTAAACGTTTTTAAGCCAATGAATGACATCATACAAGTTCTATATAAAGAGCAGTGATTTCAGGATGGGAGAGAA-TGGTATCAGGAAGACCCACTTGAATGCTGGTAAC------------------------------TAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATGAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGTTTTTTAATGAACCTGAAACGGGAAAGGGCGAGATTGACTAAGCCTGCT-------------------------------TGCCATGGACAGCAATGGGGTTGCTAGAAGATTAGCTGTGCGGAAAAAGTTATGCATTTACCTTTGAGCAT-----AATGcaattgactctccatattcatgggttctgcatccacc s gorGor5.CYUI01002012v1 7254 1491 + 57002 tgtgcccggccAAGATTCTGTTTTGATAGAACAC-TTGTGTCTCTCTCACCTTGTATTTAGAAAGGTTAGAAAGTAAAGGATAATGTATATAGAAAGCTTTTTGAAGACTCTTAAGAAGTTCATAAATATGGGGCACTATGACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTCATTTTATGAACAAGGGGGACCCTACTCAGGTCTTTTATTTTATTATACTTCTCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAAAAGACC-TCATGCCTGGTCTCACGGAGATTCAAAGGTGTTTGAGTCCTTCCTTATTATGCCCTTGGAAGATGCTTTGAGGACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATAGGGCACCTCATCACTCTGGTGTTATCCCTGAAGGGCCTTCATAATAATGTGCTT-AAAGAGTCCCCTGTTATGTCCTTCAGGATGGAGCTTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGGAACTGAAGTTGGTCATTTCtcactggatcagtcaacaagatttgagtactttctgtgtgctctgcatcattctgagtactctgggggacagaataaggcatggctcctgccttcaaggagtatggaatttaatagaagatgacaacatacatgattgtaaatctatctacatgagagtgcctaattgtgagattcctaataaacggcaagatatgttctgaaaatctgaaacataaatgaggttgaagaaattgtgaaaagtttagcagaggaggaataattcgtcaggttctttaaacacaagtaaaggggaaaggaaggaccatttttaagtttagatattccaagcgttagtggtgaggttgattatggtatgtcttctcgttgatgagggaggagactggtgaatagtggaaaata--aagttaaatagctagggtggggccaaattctggGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGGCTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTATATAAAGAGCAGTGATTTCAGGAT-GGAGAGAA--GGCATCAGGAAGACCCACTTGAATGCTGGTAAG------------------------------TAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATGAAGAATAAGGTGGGAT-AAAGAGATTTTGACAAGAGTTTTTTAATGAACCTGAAACGGGAAAGGGCGAGATTAACTAAGCCTGTT-------------------------------TGCCATGGACAGCAATGGGGTTGCTAGAAGATTAGCTGTGCGGAAAAA-TTATGCATTTACCTTTGGGCATAATAAAATGcaattgactctccatattcatgggttctgcatccact i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28278655 1521 + 133663169 tgtgcctggccAAGACTCTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATATGGGGCACTACGACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACTTC-TATAGTGGCATGGAACCTCTTGAGTTaaaccaaggctcagtgagatttggtgatttaggtagtgtcattgtgtgaacaagcaggactctactcaggtcttTTATTTTATTATACTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGACC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAATGGCCTTCATAGTAATGTGCTT-AAAGAGTCTCCTATTATGTCCTTTAGAATGGAGCCTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGAAACTGAAGTTGGTCGTTTCtcactggatcagtcaacaagatttcagtactttctgtgggctctgcatcgttctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaatgtacatgactgtaaatctatctacatgagagtgcctaattgtgagattcctaataaat-gcaagacaggttctgaaaacgtgaaacataaatgaggttgaagaaattgtgaaaagtttagcagaggaggaataatttgTCAGGTTCTTTAAATACAAATAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGTTATGTCTTCTCGTTGATGAGGGAGGAGActggcaaatagtggaaaata--aagttaaatagctagggtggggtcaaattatggGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGACTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAA-TGGCACCAGGAAGATCCACTTGAATGCTGGTAAG------------------------------TGATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGCTTTTTAATGAACCTGAAATGGAAAAGGGAGAGATTAATTAAGCCTGCTTCCCAAACTTTCTGACTGGAAGAGA-GTTTATGCCATGGACAGCCATGGGGTTGCTAGAAAATTAGCTGTGGGGAAAAAATTATGCATTTGCCTTTGGGCATAATGAAATGcaattggccctccatattcatgggttctgcatccact i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27964835 1521 + 137757926 tgtgcctggccAAGACTCTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATATGGGGCACTACGACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACTTC-TATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTCATTGTGTGAACAAGCAGGACTCTACTCAGGTCTTTTATTTTATTATACTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGACC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAATGGCCTTCATAGTAATGTGCTT-AAAGAGTCTCCTATTATGTCCTTTAGAATGGAGCCTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGAAACTGAAGTTGGTCGTTTCTCACTGGAtcagtcaacaagatttcagtactttctgtgggctctgcatcgttctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaatgtaCATGACTGTAAATCTATCTACATGAGAGTGCCTAATTGTGAGATTCCTAATAAAT-GCAAGACAGGTTCTGAAAACGTGAAACATAAATGAGGTTGAAGAAATTGTGAAAAGTTTAGCAGAGGAGGAATAATTTGTCAGGTTCTTTAAATACAAATAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGTTATGTCTTCTCGTTGATGAGGGAGGAGACTGGCAAATAGTGGAAAATA--AAGTTAAATAGCTAGGGTGGGGTCAAATTATGGGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGACTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAG-TGGCACCAGGAAGACCCACTTGAATGCTGGTAAG------------------------------TAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGCTTTTTAATGAACCTGAAATGGAAAAGGGAGAGATTAATTAAGCCTGCTTCCCAAACTTTCTGACTGGAAGAGA-GTTTATGCCATGGACAGCCATGGGGTTGCTAGAAAATTAGCTGTGGGGAAAAAATTATGCATTTGCCTTTGGGCATAATGAAATGcaattggctctccatattcatgggttctgcatccact i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5793757 1518 + 7948249 tgtgcctggccAAGA--CTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATAGGGGGCACTACGACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACTTC-TATAGTGGCATGGAACCTCTTGAGTTaaaccaaggctcagtgagatttggtgatttaggtagtgtcattgtgtgaacaagcaggactctactcaggtcttTTATTTTATTATACTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGATC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAATGGCCTTCATAGTAATGTGCTT-AAAGAGTCTCCTATTATGTCCTTTAGAATGGAGCCTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGAAACTGAAGTTGGTCGTTTCtcactggatcagtcaacaagatttcagtactttctgtgggctctgcatcgttctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaatgtacatgactgtaaatctgtctacatgagagtgcctaattgtgagattcctaataaat-gcaagacaggttctgaaaacgtgaaacataaatgaggttgaagaaattgtgaaaagtttagcagaggaggaataatttgTCAGGTTCTTTAAATACAAATAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGTTATGTCTTCTCGTTGATGAGGGAGGAGActggcaaatagtggaaaata--aagttaaatagctagggtggggtcaaattatggGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGACTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAA-TGGCACCAGGAAGACCCACTTGAATGCTGGTAAG------------------------------TAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGCTTTTTAATGAACCTGAAATGGAAAAGGGAGAGATTAATTAAGCCTGCTTCCCAAACTTTCTGACTGGAAGAGA-GTTTATGCCATGGACAGCC-TGGGGTTGCTAGAAAATTAGCTGTGGGGAAAAAATTATGCATTTGCCTTTGGGCATAATGAAATGcaattggccctccatattcatgggttctgcatccact i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1669205 1519 + 10730278 tgtgcctggccAAGACTCTGTTTTGATAGAATACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATATAGGGCACTACGACTATGCATATGAAAATATTTTCTATCAGTTGGCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTaaaccaaggctcagtgagatttggtgatttagatagtgtcattgtatgaacaagcaggactctactcaggtcttTTATTTTATTATACTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGACC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAAGGGCCTTTATAGTAATGTGCTT-AAAGAGTCTCCTATTGTGTCCTTTAGGATGGAGCCTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGAAACTGAAGTTGGTCGTTTCtcactggatcagtcaacaagatttcagtactttctgtgtgctctgcatcattctgagtactttgggggacagaataatgtgtggctcctgccctcaaggagtatggcatttaatagaagatgacaatgtacatgactgtaaacctatctacatgagagtgcctaattgtgagattcctaataaat-gcaagacaggttctgaaaacgtgaaacataaatgaggttgaagaaattgtgaaaagtttagcagaggaggaataatttgtcaggttctttaaatacaaataaaggggaaaggaaggaccatttttaagtttagatattccaagggttagtggtgaggttgattatgttatgtcttctcgttgatgagggaggagactggcaaatagtggaaaata--aagttaaatagctagggtggggtcaaattatggGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGACTTGAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAA-TGGCACCAGGAAGACCCACTTGAATGCTGGTAAG------------------------------TAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGGTACGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGTTTTTTAATGAACCTGAAATGGGAAAGG----GATTAATTAAGCCTGCTTCCCAAACTTTCTGACTGGAAGAGAGGTTCATGCCATGGACAGCCATGGGGTTGCTAGAAAATTAGCTGTGGGGAAAAAATTATGCATTTGCCTTTGGATGTAATGAAATGcaattggccctccatattcatgagttctgcatccact i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27000072 1518 + 128539186 tgtgcctggccAAGACTCTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATATGGGGCACTACAACTATGCATATGAAAATATTTCCTATCAGTTGGCAGTTACCACTTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTCATTGTATGAACAAGCAGGACTCTACTCAGGTC-----TTTTATTATATTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGACC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATCATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAAGGGCCTTCATAGTAATGTGCTT-AAAGAGTCTCCTACTATGTCCTTTAGGATGGAGCCTGACTTGCCGAAATTGCTATGCACATGTTAAAGAGAGGCTGAAACTGAAGTT-GTTGTTTCTCACTGGAtcagtcaacaagatttcagtactttctgtgtgctctgcgtcgttctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgacaatgtaCATGACTGTAAACCTATCTACATGAGAGTGCCTAATTGTGAGATTCCTAATAAAT-GCAAGACAGGTTCTGAAAACGTGAAACATAAATGAGGTTGAAGAAATTGTGAAAAGTTTAGCAGAGGAGGAATAATTTGTCAGGTTCTTTAAATACAAATAAAGGGGAAAGGAAGGACCGTTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGTTATGTCTTCTCGTTGATGAGGGAGGAGACTGGCAAATAGTGGAAAATA--AAGTTAAATAGCTAGGGTGGGGTCAAATTATGGGTTTTAATAAAAGCCAGGCATAGAAATTTAGATTGGGGTGGTAGGAAAAGGAAGACTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAATTGGCACCAGGAAGACCCACTTGAATGCTGGTAAG------------------------------TAATGTTACTAACAATGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATACGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGTTTTTTAATGAACCTGAAATGGGAAAGGGAGAGATTAATTAAGCCTGCCTCCCAAACTTTCTGACTGGAAGAGAGGTTCATGCCATGGACAGCCATGGGATTGCTAGAAAATTAGCTGTGGGGAAAAAAATATGCATTTGCCTTTGGGTGTAATGAAATGcaattggtcctccatattcatggggtctgcatccact i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1155483 1518 - 1713548 tgtgcctggccAAGACTCTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATATGGGGCACTACGACTATGCATATGAAAATATTTTCTATCAGTTGGCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTaaaccaaggctcagtgagatttggtgatttagatagtgtcattttatgaacaagcaggactctactcaggtcttTTATTTTATTATACTTCCCTTTGACATTCACTGCAGTT----AACTCTTTCAGAAGACC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACCCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCACCTCATCACTCCAGTGTTATCCCTAAAGGTCCTTTATAGTAATGTGCTT-AAAGAGTCTCCTATTACGTCCTTTAGGATGGAGCCTGACTTGCCCAAATTGCTATGTACATGTTAAAGAGAGGCTGAAACTGAAGTTGGTCGTTTCtcactggatcagtcaacaagatttcagtactttctgtgtgctctgcatcattctgagtactttgggggacagaataaggcgtggctcctgccctcaaggagtatggaatttaatagaagatgacaatgtacatgactgtaaacctatctacatgagagtgcctaattgtgagattcctaataaat-gcaagacaggttctgaaaacgtgaaacataaatgaggttgaagaaattgtgaaaaatttagcagaggaggaataatttgtcaggttctttaaatacaaataaaggggaaaggaaggaccatttttaagtttagatattccaagggttagtggtgaggttgattatgttatgtcttctcgttgatgaaggaggagactggcaaatagtgaaaaata--aagttaaatagctagggtggggtcaaattatgggttttaataaaagccaggcatagaaatttagattggggtggtagaaaaaggaagacttgaaaagtttttgagccaatgaatgacatcatacaagttctgtgtaaagaacagtgatttcaggatgggagagaa-tggcaccaggaagacccacttgaatgctggtaag------------------------------taatgttactaacaatgccattagtaacattaatgttactagggcctggactgatatgctgatggaagtgagaataaagaataaggtgggatgaaagagattttgacaagagttttttaatgaacctgaaatgggaaagggagagattaattaagcctgcttcccaaactttctgactggaagagaggttcatgccatggacagccatggtgttgctagaaaattagctgtgggg-aaaaattatgcatttgcctttggacgtaatgaaatgcaattggccctccatattcatgggttctgcatccact i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2188539 1548 - 5424790 tgtgcctggccAAGACTCTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGTATTTAGAAAAGTTAGAAAGTAAAGGATCATGTATATAGAAAGCTTTTTGAAGACTCTTAAG---TTCATAAATATGAGGCACTACGACTATGCATATGAAAATATTTCCTATCAGTTGTCAGTTACCACCTCTTATAGTGGCATGGAACCTCTTGAGTTAAACCAAGGCTCAGTGAGATTTGGTGATTTAGGTAGTGTCATTTTATGAACAAGCAGGACTCTGCTCAGGTC-----TTTTATTATACTTCCCTTTGACATTCACTCCAGTTAAAGAACTCTTTCAGAAGACC-TCATGCCTGTTCTCATGGAGATTCAAGGGTGTTTGAGTCCTTCCTTATTATCCCCTTGGAAGATGCTTTGAGAACTCCAGTGATGAATCCCAAGAACTCTGTCTCCATTATCCCTGGTATGGAGCATCTCATCACTCCAGTGTTATCCCTAAAGGGCCTTCATAGTAATGTGCTT-AAAGAGTCTCCTTTTATGTCCTTTAGGATGGAGCCTCAATTGCCCAAATTGCTATGTACATGTTAAAGAGAGGTTGAAACTGAAGTTGGTCGTTTCtcactggatcagtcaacaagatttcagtactttctgtgtgctctgcatcattctgagtactttgggggacagaataaggcgtggctcctgccttcaaggagtatggaatttaatagaagatgagaatgtacatgactgtaaatctatctacatgagagtgcctaattgtgagattcctaataaat-gcaagacaggttctgagaacatgaaacataaatgaggttgaagaaattgtgaaaagtttagcagaggaggaataatttgTCAGGTTCTTTAAATACAAATAAAGGGGAAAGGAAGGACCATTTTTAAGTTTAGATATTCCAAGGGTTAGTGGTGAGGTTGATTATGTTATGTCTTCTCGTTGATGAGGGAGGAGActggcaaatagtggaaaata--aagttaaatagctagggtggggtcaaattatggGTTTTAATAAAAACCAGGCATAGAAATTTAGATTGGGGTGGTAGAAAAAGGAAGACTTTAAAAGTTTTTGAGCCAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGATTTCAGGATGGGAGAGAA-TGGCACCAGGAAGACCCACTTGAATGCTGGTAAGTAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAACAGTGCCATTAGTAACATTAATGTTACTAGGGCCTGGACTGATATGCTGATGGAAGTGAGAATAAAGAATAAGGTGGGATGAAAGAGATTTTGACAAGAGTTTTTTAATGAACCTGAAATGGGAAAGGGAGAGATTAATTAAGCCTGCTTCCCAAACTTTCTGACTGGAGGAGAGGTTCATGCCATGGACAGCCATGGGGTTGCTAGAAAATTAGCTGTGGGGAAAAAATTACGCATTTGCCTTTAGGCATAATGAAATGcaattggccctccatattcatgggttctgcagccact i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17697627 1504 + 29834108 tgtgcctggccAAGA--CTGTTTTGATAGAACACTTTGTGTCTCTCTCACCTTGCATTTAGAAAAGTTAGAAAGTAAAGGATAATGTATATAGAAAGTCTTTTGAAGACTCTGAGGAAGTTCATAAATATGGGGCACTACAACTATGCATATGAAAATATTTCTTATCTGTTGGCAGTTACCACCTCTTACAGTAGCATGGACTCTCTTGAGTTAAACCAAGGCTGAATGAGATTTGGTGATTAATGTAGTGTCATTTTATGAATAAGCAGGACTCTACTCAGGTCTTTTATTTTATTATACTTCTCTTTGACATTCACCCCAGTCACAGAACTCTTTCAAAGGACCAGTGTGCCTGTTCTCATGGAGATTCAAAGCTGTTAGAGTCCTTTTTTCTTACCTCCTTGGAAGATACTTTGAGAACCCCAGTGATGAATCCCAAGAAGTCTGTCTCCATTATCCCTGGTATAGGGCACCTCATCACTCCAGTATTATCCCTAAAGGGACTTCATAATAAGGTGCTT-AAAGAGTCCCCTGTTATATCCTTTAGGATGGTGCTTGACTTGCCCAAAGTGCTATGTACATGTTAAAGAGAGGCTG-AACTGAAGTCGTTCGTTTCTCACTGGAtcagtcaatgagatttgagcactttctgtgtgctctgcatcatactgagtactttggctgacagaataaggtgtggctcctgccttcaaggagtatgaaatttagtagaacctgacaacatacatgACTGTAAATCTTTCTACATGAGAGTGCTTACTTGTGAGATTCATAATAAGT-GCAAGACAGGTTCTGAAAAAGCGAAATATAACTGAGTTTGAAGAAATTGTGAAAAGTTTAGCAGAGGAGGAATGATTCATTGGGTTCTTTAAATACAAGTAAAGGGGAAAGGAAGGACCATTTTTAAGTTTTGATATTCCAAGGG-TAATGGTGAGGTTGATTATAGTATGGCTTCTCACTGATGAGGGAGGAGACTGGTGAATAGTGGAAAATATCAAGTTAAATAGCTAGGGTTGGGCCAAATTATGGGTTTTAATAAAAATCAGGCATAGAAATTTAGATTGGGGTGGCAGAAAAAGGAAGGCTTTAA---TGAATGAGCTAATGAATGACATCATACAAGTTCTGTATAAAGAGCAGTGGTTTCAGGATTGAAGAGAA-TATCATcaggaagacccacttgaatgctggtaag------------------------------taatgttactaacagtaccat------------------aagggcctggactgatgtgctgatggaagtgagaatgaagactaaggtggaatgaaagagtctttgacaagagttttttaatgaacctgaaacaggaaagggagagattaattaagcctgcttcccaaactttctgactggaagaaaggttcatgccatggacagcaatggggttgtaagaagattagctgtaggggaaaagttatgcatttacctttgggcataattaaacccaattggccctccgtattcatgggttttgcatgcact i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=8026.000000 s hg38.chr14_KI270725v1_random 47765 2 + 172810 aa s gorGor5.CYUI01002012v1 8745 2 + 57002 ga i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2066089 1 + 72422247 -a i ponAbe2.chrUn N 0 I 723 s rheMac8.chr11 28280176 2 + 133663169 ga i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27966356 2 + 137757926 ga i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5795275 2 + 7948249 ga i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1670724 2 + 10730278 ga i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27001590 2 + 128539186 ga i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157001 2 - 1713548 ga i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2190087 2 - 5424790 ga i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17699131 2 + 29834108 ga i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=2458856.000000 s hg38.chr14_KI270725v1_random 47767 666 + 172810 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacaatgataaaaaatgatacaaataaaaaacaacatggtataccaactatttacatagcatttacatcgtattaaatgttattaagtaatctagagattatttaaagtatctaggaggatgtgtgtaggttata-tgcaaatactacactattttataccagtaacttgagcatccatggattttggtatacaagggggatcctggaacaaattcgccatgcatatcaaaggatg---actgTATGAGTTATCTGTAAAATGGTTTGGTTGAAATGTTTAGAAAACAGCTAGAAATACAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAGCTCTCTGTGAGTTCCAAGACAGATGCAAGGACTGGCATTCATGCACAGCTTCTAGCAGTTAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAATTTTTCTCCTGGTGATAAAAGGCATGTAAGGCTATTTTAGGAAATTGAAAAATGCTAAAAGGTATAAAGAAAAAGAAAAGATAATCATTAATAGTACGTTAGTAAACAAGATTTGACTAAAGATATCACTT s gorGor5.CYUI01002012v1 8747 666 + 57002 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacaatgataaaaaatgatacaaataaaaaacaacatggtataccaactatttacatagcatttacatcgtattaattgttattaagtaatctagagatgatttaaagtatataggaggatgtgtgtaggttata-tgcaaatactacactattttataccagtaacttgagcatccatggattttggtatacaagggggatcctggaaccaattccccatgcatatcaaaggatg---actgTATGAGTTATCTGTAAAATGGTTTGGTTGAAATGTTTAGAAAACAGCTAGAAATACAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAGCTCTCTGTGAGTTCCAAGACAGATGCAAGGACTGGCATTCATGCACAGCTTCTAACAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctattttaggaaattgaaaaatgcaaaagggtataaagaaaaagaaaagataatcattaatagtacgttagtaaacaagatttgactaaagatatgactt i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28280178 662 + 133663169 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacaacaataaaaaaagatacaaatataaaacaacacggtataccaactatttacatagcatttatatcatattaagtatta-taagtaatctagaggtgatttaaagtatataggagtatatgtgtacgttata-tgcaaatactgcactattttatatcagtaacttgagcatccatggattttggtatacatgggggatcttggaaccaattccccatgcatatcaaaggatg---actgTATGAGTTATCTGTAAAATGTTTTGGTTGAAGTGTTTAGAAAACAGGTAGAAATATAAGACTGACTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGACCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGGCATTCATGCACAGCTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctgttttaggaaactgaaaaatgcaaaaaggtataaagaaaaagaaaaaataatcattaatagtactttagtaaacaagttttgtctaaagata-gactt i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27966358 662 + 137757926 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacaacgataaaaaaagatacaaatataaaacaacacggtataccaactatttacatagcatttatatcatattaagtatta-taagtaatctagaggtgatttaaagtatataggagtatatgtgtacgttata-tgcaaatactgcactattttatatcagtaacttgagcatccatggattttggtatacatgggggatcttggaaccaattccccatgcatatcaaaggatg---actgTATGAGTTATCTGTAAAATGTTTTGGTTGAAGTGTTTAGAAAACAGGTAGAAATATAAGACTGACTATTGGATGAAAAAAACATAGGGCTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGACCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGGCATTCATGCACAGCTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctgttttaggaaactgaaaaatgcaaaaaggtataaagaaaaagaaaaaataatcattaatagtactttagtaaacaagttttgtctaaagata-gactt i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5795277 662 + 7948249 ttcgaacaactgtggaacaaaattgtcagaaaaaacaatacaacaataaaaaaagatacaaatataaaacaacacggtataccaactatttacatagcatttatatcatattaagtatta-taagtaatctagaggtgatttaaagtatataggagtatatgtgtacgttata-tgcaaatactgcactattttatatcagtaacttgagcatccatggattttggtatacatgggggatcttggaaccaattccccatgcatagcaaaggatg---actgTATGAGTTATCTGTAAAATGTTTTGGTTGAAGTGTTTAGAAAACAGGTAGAAATATAAGACTGACTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGACCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGGCATTCATGCACAGCTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctgttttaggaaactgaaaaatgcaaaaaggtataaagaaaaagaaaaaataatcattaatagtactttagtaaacaagttttgtctaaagata-gactt i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1670726 663 + 10730278 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacagcaataaaaaatgatacaaataaaaaaaaacacggtataccaactatttacatagcatttacatcatattaagtatta-taagtaatctagaggtgatttaaagtatataggagtatgtgtgtatgttata-tgcaaatactacactattttatatcggtaacttgagcatccatggattttggtatacacgggggatcttggaaccaattccccatgcatgtcaaaggatg---actgTATGAGTTATCTGTAAGATGTTTTGGTTGAAGTGTTTAGAAAACAGCTAGAAATATAAGACTGGCTGTTGGATGGAAAAAACATAGGACTAGGAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGACCTCTC--TGAGTTCCAAGACACATGCAGAGACTGGCATTCACGCACAGCTTCTAATAGATAAATCTGAAGACTTCTTAGTATGCATGTTGACTGAAATTACTTCAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctcttttaggaaattgaaaaatgcaaaaaggtataaagaaaaagaaaaaataatcattaatagtactttagtaaacaagatttgtctaaagatacgactt i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27001592 659 + 128539186 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacaacaataaaaaatgatacaaataaaaaataacacggtatgccaactatttacatagcatttacatcatat----tatta-taagtaatctagaggtgatttaaagtatataggagtatgtgtgtacgttata-tgcaaatactacaccattttatatcagtaacttgagcatctatggattttggtatacacgggggatcttggaatcaattccccatgcatatcaaagggtg---actgTATGAGTTATCTGTAAAATGTTTTGGTTGAAGTGTTTAGAAAACAGCTAGAAATATAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGGAAATTCAGGTATGCAAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAGCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGACATTCATGCACAGGTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAATTTTTGTCCTGGTGATAAAAGGCATGTAAGGCTATTTTAGGaaattgaaaaatgcaaaaaggtgtaaagaaaaagaaaaaATAATCATTAATAGTACTTTAGTAAACAAGATTTGTCTAAAGATACGACTT i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157003 659 - 1713548 ttcaaacaa-tgtggaacaaaattgtcagaaaaaacaatacagcaataaaaaatgatacaaataaaaaacaacatggtataccaactatttacatagcatttacatcatattaagtatta-taagtaatctagaggtgatttaaagtatatagaagtatgtgtgtatgttata-tgcaaatactacactattttatatcagtaacttgagcatccatggcttttggtatacacgggggatcttggaaccaattccccatacatgtcaaaggatg---actgtatgagttatctgtaaaatgttttggttgaagtgtttagaaaacagctagaaatacaagactggctgttggatgaaaaaaacataggactaggaaattcaggtatgctagtctttttgagtattgcttaaagccatgggaAAAGACCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGGCATTCGCGCACAGCTTCTAATAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTCAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctcttttaggaaattgaaaaatgcaaaaaggtataaagaaaaagaaaa---aatcattaatagtactttagtaaacaagatttgtctaaagatacgactt i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2190089 663 - 5424790 ttcaaacaactgtggaacaaaattgtcagaaaaaacaatacaacaataaaaaatgatacaaataaaaaacaacacggtataccaactatttacatagcatttacatcatattaagtatta-taagtaatctagaggcgatttaaagtatgtaggagtatgtgtgtatgttata-tgcaaatactacactatttaatatcagtaacttgagcatccatggattttggtatacatgggggatcttggaaccaattccccatgcatatcaaaggacg---actgTATGAGTTATCTGTAAAATGTTTTGGTTGAAGTGTTTAGAAAACAGCTAGAAATATAAGACTGGCTGTTGGATGAAAAAAACATAGGACTAGAAAATTCAGGTATGCTAGTCTTTTTGAGTATTGCTTAAAGCCATGGGAAAAGAGCTCTC--TGAGTTCCAAGACAGATGCAGAGACTGGCATTCATGCACAGCTTCTAACAGATAAATCTGAAGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctattttaggaaactgaaaaatgcaaaaaggtataaagaaaaagaaaaaataatcattaatagtactttagtaaacaagatttgtctaaagatacgactt i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17699133 641 + 29834108 ttcaaacaactatgggaaaaaattgtcagaaaaaataatacatcaataaaaaa------agataaataaaaacacgatataccacctatttatatagcattta-----tattaagtatta-caagtaatctagagatgatttaaagtatataggaggatatttgtaggttatattgcaaatgctatactgtattacatcagtaactagagcatccatggattttggtatccgaggaggatccttgaaccagttctccatgcattttgaagaacgactactgtatgagttatctgtaaaatgtttcagttgaaatgtttagaaaacagctagaaatataagactggctgttggatg-aaaaaacaaaggactaagaaatttaggtgtgctagactttttgggtattgcttaaagccatgggaaaggaGCTCTCTGTGAGTTCCACGACTGG----------------CATGCACAGCTTCTAATAGAGAAATCTGTGGAGTTCTTAGTATGCATGTTGACTGAAATTACTTTAGAAGTAAtttttctcctggtgataaaaggcatgtaaggctgttttaggaaattgaaaaatggaaaaaggtatgaagaaaagaaaaagataatcattaatagcactttagtaaacaagatttgactaaagatatgactt i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066090 723 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=36427.000000 s hg38.chr14_KI270725v1_random 48433 16 + 172810 TCCTCCCGCTTGTTTT s gorGor5.CYUI01002012v1 9413 16 + 57002 tcctcccgcttgtttt i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28280840 16 + 133663169 tccttctacttgtttt i rheMac8.chr11 C 0 C 0 s macNem1.NW_012011422v1 5795939 16 + 7948249 tcctactacttgtttt i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671389 16 + 10730278 tccttctacttgtttt i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002251 16 + 128539186 TCCTTCTACTTGTTTT i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157662 16 - 1713548 tccttctacttgtttt i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2190752 16 - 5424790 tccttctacttgtttt i colAng1.NW_012115777v1 C 0 I 25 e ponAbe2.chrUn 2066090 723 + 72422247 I e saiBol1.JH378123 17699774 0 + 29834108 C e macFas5.chr11 27967020 0 + 137757926 C e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=5922.000000 s hg38.chr14_KI270725v1_random 48449 3 + 172810 CTT s gorGor5.CYUI01002012v1 9429 3 + 57002 ctt i gorGor5.CYUI01002012v1 C 0 I 22 s rheMac8.chr11 28280856 3 + 133663169 ctt i rheMac8.chr11 C 0 I 22 s macNem1.NW_012011422v1 5795955 3 + 7948249 ctt i macNem1.NW_012011422v1 C 0 I 22 s cerAty1.NW_011999477v1 1671405 3 + 10730278 ctt i cerAty1.NW_011999477v1 C 0 I 22 s chlSab2.chr11 27002267 3 + 128539186 CTT i chlSab2.chr11 C 0 I 92 s manLeu1.NW_012107430v1 1157678 3 - 1713548 ctt i manLeu1.NW_012107430v1 C 0 I 22 e ponAbe2.chrUn 2066090 723 + 72422247 I e saiBol1.JH378123 17699774 0 + 29834108 C e colAng1.NW_012115777v1 2190768 25 - 5424790 I e macFas5.chr11 27967020 0 + 137757926 C e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=0.000000 s hg38.chr14_KI270725v1_random 48452 6033 + 172810 TTTCTttttcttttttttattatactctaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaatgtgtcatctagcattaggtatatctcccaatgctatccctcccccctcccccgaccccaccacagtccccagagtgtgatattccccttcctgtgtccatgtgatctcattgttcaattcccacctatgagtgagaatatgcggtgtttggttttttgttcttgcgatagtttactgagaatgatggtttccaatttcatccatgtccctacaaaggatatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccccaataaacatatgtgtgcatgtgtctttatagcagcatgatttatactcatttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccgcatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatgatatctcatagtggttttgatttgcatttctctgatggccagtgatgatgagcatttcttcatgtgttttttggctgcataaatgtcttcttttgagaagtgtctgttcatgtccttcgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcgaaaattttctcccatgttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttgtcttttgttgccattgcttttggtgttttggacatgaagtccttgcccacgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtttaacgtttaaatctttaatccatcttgaattgatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattgcttgtttttctcaggtttgtcaaagatcagatagttgtagatatgcggcattatttctgagggctctgttctgttccattgatctatatctctgttttgctaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagtgtgatgcctccagctttgttcttttgtcttaggattgacttggcaatgcgggctcttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctgtaaattaccttgggcagtatggccattttcacgatattgattcttcctacccatgagcatggaatgttcttccatttgtttgtctcctcttttatttccttgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcacccatgatttggctctctgtttgtctgttgttggtgtataagaatgcttgtgatttttgtacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacgatcgggttttctagataaacaatcatgtcgtctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttctttccttctcctgcctgattgccctggccagaacttccaacactatgttgaataggagcagtgagagagggcatccctgtcttgtgccggttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcatagatagctcttattattttgaaatacgtcccatcaatacctaatttattgagagtttttagcatgaagggttgttgaattttgtcaaaggctttttctgcatctattgagataatcatgtgttttttgtctttggctctgtttatatgctggattacatttattgatttgtgtatattgaaccagccttgcatcccagggatgaagcccacttggtcatggtggataagctttttgatgtgctgctggattcggtttgccagtattttattgaggatttttgcatcaatgttcatcaaggatattggtctaaaattctcttttttggttgtgtctctgcccggctttggtatcagaatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtttcagaaggaatggtaccagttcctccatgtacctctggtagaattcggctgtgaatccatctggtcctggactctttttggttggtaaactattgattattgccacaatttcagagcctgttattggtctattcagagattcaacttcttcctggtttagtcttgggagagtgtatgtgtcgaggaatgtatccatttcttctagattttctagtttatttgcgtagaggtgtttgtagtattctctgatggtagtttgtatttctgtgggatcggtggtgatatcccctttatcattttttattgtgtctatttgattcttctctctttttttctttattagtcttgctagcggtctatcaattttgttgatcctttcaaaaaaccagctcctggattcattgattttttgaagggttttttgtgtctctatttccttcagttctgctctgattttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtgtcaattttggatctttcctgctttctcttgtaggcatttaatgctataaatttccctctacacactgctttgaatgcgtcccagagattctggtatgtggtgtctttgttctcgttggtttcaaagaacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagcggctttgagtgagattcttaatcctgagttctagtttgattgcactgtggtctgagagatagtttgttataatttctgttcttttacatttgctgaggagagctttacttccaactatgtggtcaattttggaataggtgtggtgtggtgctgaaaaaaatgtatattctgttgatttggggtggagagttctgtagatgtctattaggtctgcttggtgcagagctgagttcaattcctgggtatccttgttgactttctgtctcgttgatctgtctaatgttgacagtggggtgttaaagtctcccattattaatgtgtgggagtctaagtctctttgtaggtcactgaggacttgctttatgaatctgggtgctcctgtattgggtgcataaatatttaggatagttagctcctcttgttgaattgatccctttaccattatgtaatggccttctttgtctcttttgatctttgttggtttaaagtctgttttatcagagactaggattgcaacccctgcctttttttgttttccattggcttggtagatcttcctccatccttttattttgagcctatgtgtgtctctgcacacgagatgggtttcctgaatacagcacactgatgggtcttgactctttatccaacttgccagtctgtgtcttttaattgcagaatttagtccatttatatttaaagttaatattattatgtgtgaatttgatcctgtcattatgatgttagctggtgattttgctcattagttgatgcagtttcttcctagtctcgatggtctttacattttggcatgattttgcagcggctggtaccggttgttcctttccatgtttagcacttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcaacatttgcttgtctataaagtattttatttctccttcacttatgaagcttagtttggctggatatgaaattctgggttgaaaattcttttctttaagaatgttgaatattggccccactctcttctggcttgtagggtttctgccgagagatccgctgttagtctgatgggctttcctttgagggtaacccgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcaaggagtatctttgtggcgttctctgtatttcctgaatctgaacgttggcctgccttgctagattggggaagttctcctggataatatcctgcagagtgttttccaacttggttccattctccacatcactttcaggtacaccaatcagacgtagatttggtcttttcacatagtcccatatttcttggaggctttgctcatttctttttattcttttttctctaaacttcccttctcgcttcatttcattcatttcatcttccattgctgataccctttcttccagttgatcgcatcggctcctgaggcttctgcattcttcacgtagttctcgagccttggttttcagctccatcagctcctttaagcacttctctgtattggttattctagttatacattcttctaaatttttttcaaagttttcaacttctttgcctttggtttgaatgtcctcctgtagctcagagtaatttgatcgtctgaagccttcttctctcagctcgtcaaaatcattctccatccagctttgttctgttgctggtgaggaactgcgttcctttggaggaggagaggcgctctgcgttttagagtttccagtttttctgttctgttttttccccatctttgtggttttatctacttttggtctttgatgatggtgatgtacagatgggttttcggtgtagatgtcctttctggttgttagttttccttctaacagacaggaccctcagctgcaggtctgttggaataccctgccgtgtgaggtgtcagtgtgcccctgctggggggtgcctcccagttaggctgctcgggggtcaggaatcagggacccacttgaggaggcagtctgcccgttctcagatctccagctgcgtgctgggagaaccactgctctcttcaaagctgtcagacagggacacttaagtctgcagaggttactgctgtctttttgtttgtctgtgccctgcccccagaggtggagcctacagaggcaggcaggcctccttgagctgtggtgggctccacccagttcgagcttcccggctgctttgtttacctaagcaagcctgggcaatggcgggcgcccctcccccagcctcgttgccgccttgcagtttgatctcagactgctgtgctagcaatcagcgagattccgtgggcgtaggaccctccgagccaggtgtgggatatagtctcgtggtgcgccgtttcttaagccggtctgaaaagcgcaatattcgggtgggagtgacccgattttccaggtgcgtccgtcacccctttctttgactcggaaagggaactccctgaccccttgcgcttcccaggtgaggcaatgcctcgccctgcttcggctcgcgcacggtgcgcacacacactggcctgcgcccactgtctggcactccctagtgagatgaacccggtacctcagatggaaatgcagaaatcaccatcttctgcgtcgctcacgctgggagctgtagaccggagctgttcctattcggccatcttggctcctccc e ponAbe2.chrUn 2066090 723 + 72422247 I e gorGor5.CYUI01002012v1 9432 22 + 57002 I e saiBol1.JH378123 17699774 0 + 29834108 C e colAng1.NW_012115777v1 2190768 25 - 5424790 I e manLeu1.NW_012107430v1 1157681 22 - 1713548 I e chlSab2.chr11 27002270 92 + 128539186 I e cerAty1.NW_011999477v1 1671408 22 + 10730278 I e macNem1.NW_012011422v1 5795958 22 + 7948249 I e macFas5.chr11 27967020 0 + 137757926 C e rheMac8.chr11 28280859 22 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=10821.000000 s hg38.chr14_KI270725v1_random 54485 41 + 172810 tcCTCCCGCTTGTTTTCTTATGCATATAAAGGGATAGGAAA s macFas5.chr11 27967020 41 + 137757926 tccttctacttgttttcttatgcatataaagggataggaaa i macFas5.chr11 C 0 C 0 s saiBol1.JH378123 17699774 41 + 29834108 tccttctgcttgttttcttatgcatataaagggataggaaa i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066090 723 + 72422247 I e gorGor5.CYUI01002012v1 9432 22 + 57002 I e colAng1.NW_012115777v1 2190768 25 - 5424790 I e manLeu1.NW_012107430v1 1157681 22 - 1713548 I e chlSab2.chr11 27002270 92 + 128539186 I e cerAty1.NW_011999477v1 1671408 22 + 10730278 I e macNem1.NW_012011422v1 5795958 22 + 7948249 I e rheMac8.chr11 28280859 22 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=3717.000000 s hg38.chr14_KI270725v1_random 54526 8 + 172810 tatgtatg s ponAbe2.chrUn 2066813 8 + 72422247 tatgtatg i ponAbe2.chrUn I 723 I 228 s macFas5.chr11 27967061 8 + 137757926 tatgtgtg i macFas5.chr11 C 0 C 0 s saiBol1.JH378123 17699815 8 + 29834108 tatatatg i saiBol1.JH378123 C 0 C 0 e gorGor5.CYUI01002012v1 9432 22 + 57002 I e colAng1.NW_012115777v1 2190768 25 - 5424790 I e manLeu1.NW_012107430v1 1157681 22 - 1713548 I e chlSab2.chr11 27002270 92 + 128539186 I e cerAty1.NW_011999477v1 1671408 22 + 10730278 I e macNem1.NW_012011422v1 5795958 22 + 7948249 I e rheMac8.chr11 28280859 22 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=273.000000 s hg38.chr14_KI270725v1_random 54534 1 + 172810 t s macFas5.chr11 27967069 1 + 137757926 t i macFas5.chr11 C 0 C 0 s saiBol1.JH378123 17699823 1 + 29834108 t i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066821 228 + 72422247 I e gorGor5.CYUI01002012v1 9432 22 + 57002 I e colAng1.NW_012115777v1 2190768 25 - 5424790 I e manLeu1.NW_012107430v1 1157681 22 - 1713548 I e chlSab2.chr11 27002270 92 + 128539186 I e cerAty1.NW_011999477v1 1671408 22 + 10730278 I e macNem1.NW_012011422v1 5795958 22 + 7948249 I e rheMac8.chr11 28280859 22 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=180.000000 s hg38.chr14_KI270725v1_random 54535 1 + 172810 a s macFas5.chr11 27967070 1 + 137757926 a i macFas5.chr11 C 0 C 0 s papAnu3.chr11 26709079 1 + 132286798 a i papAnu3.chr11 N 0 N 0 s saiBol1.JH378123 17699824 1 + 29834108 g i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066821 228 + 72422247 I e gorGor5.CYUI01002012v1 9432 22 + 57002 I e colAng1.NW_012115777v1 2190768 25 - 5424790 I e manLeu1.NW_012107430v1 1157681 22 - 1713548 I e chlSab2.chr11 27002270 92 + 128539186 I e cerAty1.NW_011999477v1 1671408 22 + 10730278 I e macNem1.NW_012011422v1 5795958 22 + 7948249 I e rheMac8.chr11 28280859 22 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=317.000000 s hg38.chr14_KI270725v1_random 54536 14 + 172810 tgtatgtatgtatg s macFas5.chr11 27967071 7 + 137757926 tgtatgt------- i macFas5.chr11 C 0 C 0 s saiBol1.JH378123 17699825 7 + 29834108 tttatgt------- i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066821 228 + 72422247 I e gorGor5.CYUI01002012v1 9432 22 + 57002 I e colAng1.NW_012115777v1 2190768 25 - 5424790 I e manLeu1.NW_012107430v1 1157681 22 - 1713548 I e chlSab2.chr11 27002270 92 + 128539186 I e cerAty1.NW_011999477v1 1671408 22 + 10730278 I e macNem1.NW_012011422v1 5795958 22 + 7948249 I e rheMac8.chr11 28280859 22 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=181644.000000 s hg38.chr14_KI270725v1_random 54550 71 + 172810 tatgtatgtatgtatgtGTGTGTAtaggatcatgcactatatatagcttgcttctttttccactatgataa s gorGor5.CYUI01002012v1 9454 71 + 57002 tatgtatgtatgtatgtgtgtgtataggatcatgcactatatatagcttgcttctttttccattatgataa i gorGor5.CYUI01002012v1 I 22 C 0 s rheMac8.chr11 28280881 71 + 133663169 tatgtgtgtatgtatgtgtgtgtataggatcatgcactatatatagcttgctttttttcccatcatgataa i rheMac8.chr11 I 22 C 0 s macFas5.chr11 27967078 54 + 137757926 -----------------gtgtgtataggatcatgcactatatatagcttgctttttttcccatcatgataa i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5795980 71 + 7948249 tatgtgtgtatgtatgtgtgtgtataggatcatgcactatatatagcttgctttttttcccatcatgataa i macNem1.NW_012011422v1 I 22 C 0 s cerAty1.NW_011999477v1 1671430 71 + 10730278 tatgtgtgtatgtatgtgtgtgtgtaggatcatgcactatatatagcttgctttttttcccatcatgataa i cerAty1.NW_011999477v1 I 22 C 0 s manLeu1.NW_012107430v1 1157703 71 - 1713548 tatgtgtgtatgtatgtgtgtgtgtaggatcatgtactatatatagcttgttttttttcccatcatgataa i manLeu1.NW_012107430v1 I 22 C 0 s colAng1.NW_012115777v1 2190793 58 - 5424790 tatgtgtgtatgtatgtgtgtgtataggatcatgcactatatatagcttgcttttttt------------- i colAng1.NW_012115777v1 I 25 C 0 s saiBol1.JH378123 17699832 54 + 29834108 -----------------gtgtgtataggatcatgcactatatatagcttgcttttttttccatcatgataa i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066821 228 + 72422247 I e chlSab2.chr11 27002270 92 + 128539186 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=579579.000000 s hg38.chr14_KI270725v1_random 54621 158 + 172810 ttttcccatgtcatgaattacggcttgcaagtgcttattcttaacaggctgcattatttttcattatttggatttattgttatttaattggagctctattattgaacatttagattgcttccaaaattttttgctcttgttaatatattgtaataaac s gorGor5.CYUI01002012v1 9525 155 + 57002 ttttcccatgtcatgaattacggcttgcaagtgcttattcttaaagggctgcattatttttcattatttggatttatt---atttaattggagctctattattgaacatttagattgcttccaaaattttttgctcttgttaatatattgtaataaac i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28280952 157 + 133663169 ttttcccatgtcatgaattatggcttgcaagtgc-tattcttaaagggctgcattatttttcgttatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaagtttttactcttattaatatattataataaac i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967132 157 + 137757926 ttttcccatgtcatgaattatggcttgcaagtgc-tattcttaaagggctgcattatttttcgttatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaagtttttactcttattaatatattataataaac i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796051 157 + 7948249 ttttcccatgtcatgaattatggcttgcaagtgc-tattcttaaagggctgcattatttttcgttatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaagtttttactcttattaatatattataataaac i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671501 157 + 10730278 ttttcccatgtcatgaattatgacttgcaagtgc-tattctcaaagggctacattatttttcattatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaaggttttactcttattaatatattataataaac i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002362 157 + 128539186 ttttctcatgtcgtgaattatggcttgcaagtgc-tattcttaaagggctgcattatttttcattatttggatttatcattatgtaattggagttctactattgaacatttagattgctcccaaaagtttttgctcttattaatatattataataaac i chlSab2.chr11 I 92 C 0 s manLeu1.NW_012107430v1 1157774 157 - 1713548 ttttcccatgtcatgaattatgacttgcaagtgc-tattctcaaagggctacattatttttcattatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaagtttttactcttactaatatattataataaac i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2190851 153 - 5424790 ----cccatgtcatgaattatggcttgcaagtgc-tattcttaaagggctgcactatttttcattatttggatttatcattatttaattggagttctattattgaacatttagattgctcccaaaagtttttgctcttattaatatattataataaac i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17699886 154 + 29834108 ttttcccatgtcatgaattactgcttgcaagtgc-tgttcttaaagggctgcattattatttattatttggatttatcattatttaattggcactc---tattgagcatttagattgcttccaaaattttttgctctttttaatatattataataaac i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2066821 228 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=5005.000000 s hg38.chr14_KI270725v1_random 54779 1 + 172810 t s gorGor5.CYUI01002012v1 9680 1 + 57002 t i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067049 1 + 72422247 T i ponAbe2.chrUn I 228 I 7 s rheMac8.chr11 28281109 1 + 133663169 t i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967289 1 + 137757926 t i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796208 1 + 7948249 t i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671658 1 + 10730278 t i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002519 1 + 128539186 t i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157931 1 - 1713548 t i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191004 1 - 5424790 t i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700040 1 + 29834108 t i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=25785.000000 s hg38.chr14_KI270725v1_random 54780 6 + 172810 tcTGTG s gorGor5.CYUI01002012v1 9681 6 + 57002 tcTGTG i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281110 6 + 133663169 tcTGTG i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967290 6 + 137757926 tcTGTG i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796209 6 + 7948249 tcTGTG i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671659 6 + 10730278 tcTGTG i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002520 6 + 128539186 tcTGTG i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157932 6 - 1713548 tcTGTG i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191005 6 - 5424790 tcTGTG i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700041 6 + 29834108 tcTGTG i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067050 7 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=5005.000000 s hg38.chr14_KI270725v1_random 54786 1 + 172810 A s gorGor5.CYUI01002012v1 9687 1 + 57002 A i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067057 1 + 72422247 A i ponAbe2.chrUn I 7 I 71 s rheMac8.chr11 28281116 1 + 133663169 A i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967296 1 + 137757926 A i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796215 1 + 7948249 A i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671665 1 + 10730278 A i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002526 1 + 128539186 A i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157938 1 - 1713548 A i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191011 1 - 5424790 A i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700047 1 + 29834108 A i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=250611.000000 s hg38.chr14_KI270725v1_random 54787 67 + 172810 AACACATACTCTTCACCTGCTACTTACATATGACTTCTGTAAGCCGAGACCTctgtatccccaggac s gorGor5.CYUI01002012v1 9688 67 + 57002 AACACATACTCTTCACCTGCTACTTACATATGACTTCTGTAAGCAGAGACCTctgtatccccaggac i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281117 66 + 133663169 AACACATACTCTT-GCCTGCTACTCAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967297 66 + 137757926 AACACATACTCTT-GCCTGCTACTCAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796216 66 + 7948249 AACACATACTCTT-GCCTGCTACTCAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671666 66 + 10730278 AACACATACTCTT-CCCTGCTACTCAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002527 66 + 128539186 AACACATACTCTT-GCCTGCTACTTAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1157939 66 - 1713548 AACACATACTCTT-GCCTGCTACTCAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191012 66 - 5424790 AACACATACTCTT-CCCTGCTACTTAGATATGACTTCTGTAAGCAGAGACCTctgtatcctcagaac i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700048 67 + 29834108 AACACATACCCTTCACCTGCTACTTAGATATGACTTCTGTAAGCAGAGacctctgtgtccccagtac i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067058 71 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=15510.000000 s hg38.chr14_KI270725v1_random 54854 3 + 172810 cta s gorGor5.CYUI01002012v1 9755 3 + 57002 cta i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067129 3 + 72422247 cta i ponAbe2.chrUn I 71 I 242 s rheMac8.chr11 28281183 3 + 133663169 cta i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967363 3 + 137757926 cta i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796282 3 + 7948249 cta i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671732 3 + 10730278 cta i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002593 3 + 128539186 cta i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158005 3 - 1713548 cta i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191078 3 - 5424790 cta i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700115 3 + 29834108 cta i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=139088.000000 s hg38.chr14_KI270725v1_random 54857 41 + 172810 gaaggttacctggacatagtagtttcttaatt--aaaaaaaat s gorGor5.CYUI01002012v1 9758 40 + 57002 gaaggttacctggacatagtagttgcttaatt--aaaaaaa-t i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281186 42 + 133663169 gaaggttacctggacatagtagttgcttaatt-aaaaaaaaat i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967366 42 + 137757926 gaaggttacctggacatagtagttgcttaatt-aaaaaaaaat i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796285 43 + 7948249 gaaggttacctggacatagtagttgcttaattaaaaaaaaaat i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671735 40 + 10730278 gaaggttacctgggcatcgtagttgcttaatt---taaaaact i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002596 41 + 128539186 gaaggttacctggacatagtagttgcttaatt--aaaaaaaat i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158008 41 - 1713548 gaaggttacctggacatagtagttgcttaatt--aaaaaaaat i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191081 41 - 5424790 gaaggttacctggacatagcagttgcttaatt--aaaaaaaat i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700118 41 + 29834108 gaaggttgcctggacatagtagttgtttaatt--aaaatatat i saiBol1.JH378123 C 0 I 64 e ponAbe2.chrUn 2067132 242 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=19980.000000 s hg38.chr14_KI270725v1_random 54898 6 + 172810 tattga s gorGor5.CYUI01002012v1 9798 6 + 57002 tattga i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281228 6 + 133663169 tattga i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967408 6 + 137757926 tattga i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796328 6 + 7948249 tattga i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671775 6 + 10730278 tattga i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002637 6 + 128539186 tattga i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158049 6 - 1713548 tattga i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191122 6 - 5424790 tattga i colAng1.NW_012115777v1 C 0 C 0 e ponAbe2.chrUn 2067132 242 + 72422247 I e saiBol1.JH378123 17700159 64 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I e panTro5.chr22 3811325 0 + 37823149 I a score=81648.000000 s hg38.chr14_KI270725v1_random 54904 20 + 172810 ttgaatgaaAGAAGACTATT s panTro5.chr22 4047032 20 + 37823149 TTGAATGAAAGAAGACTACT i panTro5.chr22 n 0 C 0 s gorGor5.CYUI01002012v1 9804 20 + 57002 ttgaatgaaAGAAGACTATT i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281234 20 + 133663169 ttgaatgaaAGAAGACTATT i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967414 20 + 137757926 ttgaatgaaAGAAGACTATT i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796334 20 + 7948249 ttgaatgaaAGAAGACTATT i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671781 20 + 10730278 ttgaatgaaAGAAGACTATT i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002643 20 + 128539186 ttgaatgaaAGAAAACTATT i chlSab2.chr11 C 0 I 242 s manLeu1.NW_012107430v1 1158055 20 - 1713548 ttgaatgaaAGAAGACTATT i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191128 20 - 5424790 ttgaatgaaAGAAGACTATT i colAng1.NW_012115777v1 C 0 C 0 e ponAbe2.chrUn 2067132 242 + 72422247 I e saiBol1.JH378123 17700159 64 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=37665.000000 s hg38.chr14_KI270725v1_random 54924 9 + 172810 AAATGTTCA s panTro5.chr22 4047052 9 + 37823149 AAATGTTCA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 9824 9 + 57002 AAATGTTCA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281254 9 + 133663169 AAATGTTCA i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967434 9 + 137757926 AAATGTTCA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796354 9 + 7948249 AAATGTTCA i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671801 9 + 10730278 AAATGTTCA i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002905 9 + 128539186 aaaTGTTCA i chlSab2.chr11 I 242 C 0 s manLeu1.NW_012107430v1 1158075 9 - 1713548 AAATGTTCA i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191148 9 - 5424790 AAATGTTCA i colAng1.NW_012115777v1 C 0 C 0 e ponAbe2.chrUn 2067132 242 + 72422247 I e saiBol1.JH378123 17700159 64 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=388920.000000 s hg38.chr14_KI270725v1_random 54933 81 + 172810 GTTCTTctttttttattctgattccctgtgtatccagaggcctcttatttgtctgcatgtatgagtttggctgtaatgaaa s panTro5.chr22 4047061 81 + 37823149 GTTCTTctttttttattctgattccctgtgtatccaggggcctcttatttggctgcatgtatgagtttggctgtaatgaaa i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 9833 81 + 57002 GTTCTTctttttttattctgattccctgtgtatccaggggcctcttatttggctgcatgtatgagtttggctgtaatgaaa i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281263 81 + 133663169 GATCCTCTTTTTTTATTCTGATTCCCTGTGTATCCAGGGGCCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAA i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967443 81 + 137757926 GATCCTCTTTTTTTATTCTGATTCCCTGTGTATCCAGGGGCCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796363 81 + 7948249 GATCCTCTTTTTTTATTCTGATTCCCTGTGTATCCAGGGGCCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAA i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671810 81 + 10730278 GATCCTCTTTTTTTATTCTGATTCCCTGTGTATCCAGGGGTCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAA i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002914 81 + 128539186 GATCCTCTTTTTTTATTCTGATTCCCTGTGTATCCAGGGGCCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158084 81 - 1713548 GATCCTCTTTTTTTATTCTGGTTCCCTGTGTATCCAGGGGCCTCTTATTTGGCTGCATATATGAGTTTGGCTGTAATGAAA i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191157 81 - 5424790 GATCCTCTTTTTTTATTCTGATTCCTTGTGTATCCAGGGGCCTCTTATTTGGCTGCATGCATGAGTTTGGATGTAATGAAA i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700223 81 + 29834108 ATTCCTCTTTTTTTATTCTGATTCCCTGTGTATCCAGGGGCCTTTTATTTGGCTTCTTATATCAGTTTGGCTGTAATGAAA i saiBol1.JH378123 I 64 I 456 e ponAbe2.chrUn 2067132 242 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=337094.000000 s hg38.chr14_KI270725v1_random 55014 81 + 172810 gtattggccatatatgaccataaacaggcattcctatttctgtcacagttat-----------------------------atttgtcattctgtattaatacatctata s panTro5.chr22 4047142 81 + 37823149 gtattggccgtatatgaccataaacaggcattcctatttctgtcacagttat-----------------------------atttgtcattctgtattaatacatctata i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 9914 81 + 57002 gtattggccgtatatgaccgtaaacaggcattcctatttctgtcacagttat-----------------------------atttgtcattctgtattaatacatctata i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281344 110 + 133663169 GTATTGGCCACGTATGACCATAAACAGGCATTCCTATTTCTATCACATGTATGACCGTAAACAGGCAATCCTATTTCTATCATTTGTCATTCTGTATTAATGCATCTATA i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967524 110 + 137757926 GTATTGGCCACGTATGACCATAAACAGGCATTCCTATTTCTATCACATGTATGACCGTAAACAGGCAATCCTATTTCTATCATTTGTCATTCTGTATTAATGCATCTATA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796444 110 + 7948249 GTATTGGCCACGTATGACCATAAACAGGCATTCCTATTTCTATCACATGTATGACCGTAAACAGGCAATCCTATTTCTATCATTTGTCATTCTGTATTAATGCATCTATA i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1671891 110 + 10730278 GTATTGGGCATGTATGACCATAAACAGGCATTCCTATTTCTATCACATGTATGACCGTAAACAGGCAATCCTATTTCTATCATTTGTCATTCTGTATCAATGCATCTATA i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27002995 110 + 128539186 ATATTGGCCATATATGACCATAAACAGGCATTCCTATTTCTATCACATGTATGACCGTAAACAGGCATTCCTATTTCTATCATTTGTCATTCTGTATTAATGCATCTATA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158165 110 - 1713548 GTATTGGCCACGTATGACCATAAACAGGCATTCCTATTTCTATCACAGGTATGACCGTAAACAGGCAATCCTATTTCTATCatttgtcattctgtattaatgcatctata i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191238 110 - 5424790 GTATTGGCCGTGTATGACCATAAACAGGCATTCCTATTTCTATCATATGTATGACCGTAAACAGGCATTCCTATTTCTATCATTTATCATGCTGTATTAATGCGTCTATA i colAng1.NW_012115777v1 C 0 C 0 e ponAbe2.chrUn 2067132 242 + 72422247 I e saiBol1.JH378123 17700304 456 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=2818.000000 s hg38.chr14_KI270725v1_random 55095 1 + 172810 c s panTro5.chr22 4047223 1 + 37823149 t i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 9995 1 + 57002 t i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067374 1 + 72422247 c i ponAbe2.chrUn I 242 I 22 s rheMac8.chr11 28281454 1 + 133663169 T i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967634 1 + 137757926 T i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796554 1 + 7948249 T i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672001 1 + 10730278 T i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003105 1 + 128539186 T i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158275 1 - 1713548 t i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191348 1 - 5424790 T i colAng1.NW_012115777v1 C 0 C 0 e saiBol1.JH378123 17700304 456 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=90613.000000 s hg38.chr14_KI270725v1_random 55096 22 + 172810 cctgatttctattgaagcatgg s panTro5.chr22 4047224 22 + 37823149 cctgatttctattgaagcatgg i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 9996 22 + 57002 cctgatttctattgaagcatgg i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281455 22 + 133663169 CCTAATTTCTATTGAagcatgg i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967635 22 + 137757926 CCTGATTTCTATTGAAGCATGG i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796555 22 + 7948249 CCTGATTTCTATTGAagcatgg i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672002 22 + 10730278 CCTGATTTCTATTGAagcacgg i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003106 22 + 128539186 CCTGATTTCTATTGAAGCATGG i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158276 22 - 1713548 cctgatttctattgaagcacgg i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191349 22 - 5424790 CCTGATTTCTATTGAagcatgg i colAng1.NW_012115777v1 C 0 C 0 e ponAbe2.chrUn 2067375 22 + 72422247 I e saiBol1.JH378123 17700304 456 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=5005.000000 s hg38.chr14_KI270725v1_random 55118 1 + 172810 t s panTro5.chr22 4047246 1 + 37823149 t i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10018 1 + 57002 t i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067397 1 + 72422247 t i ponAbe2.chrUn I 22 I 60 s rheMac8.chr11 28281477 1 + 133663169 t i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967657 1 + 137757926 T i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796577 1 + 7948249 t i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672024 1 + 10730278 t i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003128 1 + 128539186 T i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158298 1 - 1713548 t i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191371 1 - 5424790 t i colAng1.NW_012115777v1 C 0 C 0 e saiBol1.JH378123 17700304 456 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=191178.000000 s hg38.chr14_KI270725v1_random 55119 48 + 172810 tatttttgtttgcttctaagcaatgtagctaccctactgatgccgata s panTro5.chr22 4047247 48 + 37823149 tatttttgtttgcttctaagcaatgtagctaccctattgatgatgata i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10019 48 + 57002 taattttgtttgcttctaagcaatgtagctaccctactgatgctgata i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281478 48 + 133663169 taattttgtttgcttctaagcaatgcagctaccctattgatgctgata i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967658 48 + 137757926 TAATTTTGTTTGCTTCTAAGCAATGCAGCTACCCTATTGATGCTGATA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796578 48 + 7948249 taattttgtttgcttctaagcaatgcagctaccctattgatgctgata i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672025 48 + 10730278 taattttgtttgcttctaagcaatgcagctaccctattgatgctgata i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003129 48 + 128539186 TAATTTTGTTTGCTTCTAAGCAATGCAGCTACCCTATTGATGCTGATA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158299 48 - 1713548 taattttgtttgcttctaagcaatgcagctaccctattgatgctgata i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191372 48 - 5424790 taattttgtttgcttctaagcaatgcagctaccctgttgatgctgata i colAng1.NW_012115777v1 C 0 C 0 e ponAbe2.chrUn 2067398 60 + 72422247 I e saiBol1.JH378123 17700304 456 + 29834108 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=53835.000000 s hg38.chr14_KI270725v1_random 55167 11 + 172810 aaaataaattt s panTro5.chr22 4047295 11 + 37823149 aaaataaattt i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10067 11 + 57002 aaaataaattt i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281526 11 + 133663169 aaaataaattt i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967706 11 + 137757926 AAAATAAATTT i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796626 11 + 7948249 aaaataaattt i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672073 11 + 10730278 aaaataaattt i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003177 11 + 128539186 AAAATAAATTT i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158347 11 - 1713548 aaaataaattt i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191420 11 - 5424790 aaaataaattt i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700760 11 + 29834108 aaaataaaCtt i saiBol1.JH378123 I 456 C 0 e ponAbe2.chrUn 2067398 60 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=6600.000000 s hg38.chr14_KI270725v1_random 55178 1 + 172810 c s panTro5.chr22 4047306 1 + 37823149 c i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10078 1 + 57002 c i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067458 1 + 72422247 c i ponAbe2.chrUn I 60 I 14 s rheMac8.chr11 28281537 1 + 133663169 c i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967717 1 + 137757926 C i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796637 1 + 7948249 c i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672084 1 + 10730278 c i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003188 1 + 128539186 C i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158358 1 - 1713548 c i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191431 1 - 5424790 c i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700771 1 + 29834108 c i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=57924.000000 s hg38.chr14_KI270725v1_random 55179 13 + 172810 tgaacctataaga s panTro5.chr22 4047307 13 + 37823149 tgaacctataaga i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10079 13 + 57002 tgaacctataaga i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281538 13 + 133663169 tgaacctgtacga i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967718 13 + 137757926 TGAACCTGTACGA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796638 13 + 7948249 tgaacctgtacga i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672085 13 + 10730278 tgaacctatacga i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003189 13 + 128539186 TGAACCTGTACGA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158359 13 - 1713548 tgaacctgtacga i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191432 13 - 5424790 tgaacctatacga i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700772 13 + 29834108 tgaacctataaga i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067459 14 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=6600.000000 s hg38.chr14_KI270725v1_random 55192 1 + 172810 c s panTro5.chr22 4047320 1 + 37823149 c i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10092 1 + 57002 c i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067473 1 + 72422247 c i ponAbe2.chrUn I 14 I 194 s rheMac8.chr11 28281551 1 + 133663169 c i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967731 1 + 137757926 C i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796651 1 + 7948249 c i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672098 1 + 10730278 c i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003202 1 + 128539186 C i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158372 1 - 1713548 c i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191445 1 - 5424790 c i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700785 1 + 29834108 c i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=875416.000000 s hg38.chr14_KI270725v1_random 55193 192 + 172810 tgaggattgggcctaggttgtggtaaattggcaagataatggatactaccctgtcaagagccctctgaagagaaaagtctgccacccttca-ccaggtagaaactccTGGCAGTGCCACATTTTCCAGTTTGACGCCCTGTGATACCCTGAAAACACAGATGTTTGACTCTTTTCAAATAATATTTTAACATA s panTro5.chr22 4047321 192 + 37823149 tgaggattgggcctaggttttggtaaattggcaagataatggatgctaccctgtcaagagccctctgaagagaaaagtctgccaaccttca-ccaggtagaaactccTGGCAGTGCCACATTTTCCAGTTTGATGCCCTGTGATACCCTGAAAAGACAGATGTTTGACTCTTTTCAAATAATATTTTAACATA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10093 192 + 57002 tgaggattgggcctaggttgtggtaaattggcaagataatggatgctaccctgtcaagagccctctgaagagaaaagtctgccacccttca-ccaggtagaaactccTGGCAGTGCCACATTTTCCAGTTTGACGCCCTGTGATACCCTGAAAAGACAGATGTTTGACTCTTTTCAAATAATATTTTAACATA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281552 191 + 133663169 tgaggattaggcctcggttgtggtagattggcaagataatgaatgctgccctgtcgagagccctctgaagagaacagtctgccACCCTTCA-CCAGGTAGAAA-TCCTGGCAGTGCCACGTTTTCCAGTTTGACTACCTATGATGCCCTGAAAAGACAGATGTTTGACTCTTTTCAAATAGTATTTTGACATA i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967732 191 + 137757926 TGAGGATTAGGCCTCGGTTGTGGTAGATTGGCAAGATAATGAATGCTGCCCTGTCGAGAGCCCTCTGAAGAGAACAGTCTGCCACCCTTCA-CCAGGTAGAAA-TCCTGGCAGTGCCACGTTTTCCAGTTTGACTACCTATGATGCCCTGAAAAGACAGATGTTTGACTCTTTTCAAATAGTATTTTGACATA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796652 191 + 7948249 tgaggattaggcctcggttgtggtagattggcaagataatgAATGCTGCCCTGTCGAGAGCCCTCTGAAGAGAACAGTCTGCCACCCTTCA-CCAGGTAGAAA-TCCTGGCAGTGCCACGTTTTCCAGTTTGACTACCTATGATGCCCTGAAAAGACAGATGTTTGACTCTTTTCAAATAGTATTTTGACATA i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672099 186 + 10730278 tgaggattgggcctaggttgtggtaaattggcaagataacgaatgctgccctgtcgagagccctctgaaa-----agtctgccacccttca-ccaggtagaaa-tcctggcagtgccacgttttCCAGTTTGACTCCCTGTGATGCCCGGAAAAGACAGATGTTTGACTCTTTTCAAATGGTATTTTAACATA i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003203 191 + 128539186 TGAGGATCGGGCCTAGGTTGTGGTAAATTGGCAAGATGATGAATGCTACCCTGTCGAGAGCCCTCTGAAGATAAAAGTCTGCCACCCTTCA-CCAGGTAGAAA-TCCTGGCAGTGCCACGTTTTCCAGTTTGACTCCCTGTGATACCCTGAAAAGACAGATGTTTGACTCTTTTCAAATAGTATTTTGACATA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158373 191 - 1713548 tgaggattgggcctcggttgtggtaaattggcaaggtaacgaatgctgccctgtcgagagccctctgaagagaaaagtctgccacccttca-ccaggtagaaa-tcctggcagtgccacgttttCCAGTTTGACTCCCTGTGATGCCCAGAAAAGACAGATGTTTGACTCTTTTCAAATGGTATTTTAACATG i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191446 191 - 5424790 tgaggattgggcctaggttgtggtaaattggcaagataatgaatgctaccctgttgagagccctctgaagagaaaagtctgccacccttca-ccaggtAGAAA-TCCTGGCAGTGCCACGTTTTCCAGTTTGACTCCCTGTGATGCCCTGAAAAGACAGATGTTTGACTCTTTTCCAATAGTATTTTAACATA i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700786 193 + 29834108 tgaggattaggcctaggttttggtcaattggcaagataatgaatgctaccctgtcgagagccctctgaagagaaaagtctgctacctttcacccaggtagaaactccTGACAGTGCCACATTTTCCAGTTTGAATCTCTGTGGTACCCTGAAAAGACAGATGTTTGACTTTTTTCAAATAATATTTTAACATA i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067474 194 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=6006.000000 s hg38.chr14_KI270725v1_random 55385 1 + 172810 T s panTro5.chr22 4047513 1 + 37823149 T i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10285 1 + 57002 T i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067668 1 + 72422247 T i ponAbe2.chrUn I 194 I 29 s rheMac8.chr11 28281743 1 + 133663169 T i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967923 1 + 137757926 T i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796843 1 + 7948249 T i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672285 1 + 10730278 T i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003394 1 + 128539186 T i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158564 1 - 1713548 T i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191637 1 - 5424790 T i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700979 1 + 29834108 T i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=126260.000000 s hg38.chr14_KI270725v1_random 55386 27 + 172810 TTTAAGATGCAAAGGCATTGTGTCAGA s panTro5.chr22 4047514 27 + 37823149 TTTAAGATGCAAAGGCATTGTGTCAGA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10286 27 + 57002 TTTAAGACGCAAAGGCATTGTGTCGGA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281744 27 + 133663169 TTTAAGATGTAAAGGCATTGTGTCAGA i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967924 27 + 137757926 TTTAAGATGTAAAGGCATTGTGTCAGA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796844 27 + 7948249 TTTAAGATGTAAAGGCATTGTGTCAGA i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672286 27 + 10730278 TTTAAGATGCAGAGACATTGTGTCAGA i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003395 27 + 128539186 TTTAAGATGCAAAGGCATTGTGTCGGA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158565 27 - 1713548 TTTAAGATGCAGAGGCATTGTGTCAGA i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191638 27 - 5424790 TTTAAGATGCAAAGGCATTGTGTCAGA i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17700980 27 + 29834108 TTCAAAATGCAAAGGCGTTGTGTCAGA i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067669 29 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=-1927.000000 s hg38.chr14_KI270725v1_random 55413 1 + 172810 -T s panTro5.chr22 4047541 1 + 37823149 -C i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10313 1 + 57002 -C i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067698 1 + 72422247 -T i ponAbe2.chrUn I 29 I 42 s rheMac8.chr11 28281771 1 + 133663169 -C i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967951 1 + 137757926 -C i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796871 1 + 7948249 -C i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672313 1 + 10730278 -C i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003422 1 + 128539186 -C i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158592 1 - 1713548 -C i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191665 1 - 5424790 -C i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701007 1 + 29834108 A- i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=184371.000000 s hg38.chr14_KI270725v1_random 55414 42 + 172810 TTTTTTCTTAAGAATGTATTTCATTACCACTCAGAAGTTAGC s panTro5.chr22 4047542 42 + 37823149 TTTTTTCTTAAGAATATATTTCATTACCACTCAGAAGTTAGC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10314 42 + 57002 TTTTTTCTTAAGAATATATTTCATTACCACTCAGAAGTTAGC i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281772 41 + 133663169 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAAGTTAGC i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967952 41 + 137757926 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAAGTTAGC i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796872 41 + 7948249 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAAGTTAGC i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672314 41 + 10730278 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAATTTAGC i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003423 41 + 128539186 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAAGTTAGC i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158593 41 - 1713548 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAATTTAGC i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191666 41 - 5424790 TTTTTTCTTAAGAATATATTT-GTTGCCACTCAGAAGTTAGC i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701008 42 + 29834108 GTTTTTCTTAAGAATATATTTCATTGCCACTCAGAAGTTAGT i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067699 42 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=6006.000000 s hg38.chr14_KI270725v1_random 55456 1 + 172810 T s panTro5.chr22 4047584 1 + 37823149 T i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10356 1 + 57002 T i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2067741 1 + 72422247 T i ponAbe2.chrUn I 42 I 275 s rheMac8.chr11 28281813 1 + 133663169 T i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967993 1 + 137757926 T i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796913 1 + 7948249 T i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672355 1 + 10730278 T i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003464 1 + 128539186 T i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158634 1 - 1713548 T i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191707 1 - 5424790 T i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701050 1 + 29834108 T i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=1239132.000000 s hg38.chr14_KI270725v1_random 55457 271 + 172810 TCCAAAAGAAATAAGTGTGTGCAAAGGCTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTT---ATGGTAATAAAAGCACATTATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTTTATTAGAAAATTAGATCATTTCTAATTTGATTAGGGGAAGTCTAATGGGAAAACTTTTTAACTGAGCGGTCCAATTCGAAACATGAATATCTGTGCTGGAAGCTTCTATTGAACTTTACTTAAG s panTro5.chr22 4047585 269 + 37823149 TCCAAAAGAAAT--GTGTGTGCAAAGGTTTATGATGGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTT---ATGGTAATAAAAGCACATTATGCAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTTTATTAGAAAATTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGGAAAAACTTTTTAACTGAGCGGTCCAATTCGAAACATGAATATCTGTGCTGGAAGCTTCTATTGAACTTTACTTAAG i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10357 271 + 57002 TCCAAAAGAAATAAGTGTGTGCAAAGGCTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTT---ATGGTAATAAAAGCACATTATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTTTATTAGAAAATTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGGGAAAACTTTTTAACTGAGCGGTCCAATTCGAAACATGAATATCTGTGCTGGAAGCTTCTATTGAACTTTACTTAAG i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28281814 273 + 133663169 TCCAAAAGGAATAGGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGGTGATAAAAGCACATGATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTGGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGCAAAAACTTTTTGACTGAGCAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATTGAAC-TTACTTAAG i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27967994 273 + 137757926 TCCAAAAGGAATAGGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGGTGATAAAAGCACATGATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTGGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGCAAAAACTTTTTGACTGAGCAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATTGAAC-TTACTTAAG i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5796914 273 + 7948249 TCCAAAAGGAATAGGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGGTGATAAAAGCACATGATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTGGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGCAAAAACTTTTTGACTGAACAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATTGAAC-TTACTTAAG i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672356 273 + 10730278 TCCAAAAGGAATAGATGTGTGCAAAGGTTTGTGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCCATGGTGATAAAAGCACATGATGAAGAATTTTTTAGGTCCGGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTAGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTAACGCAAAAACTTTTTGACTGAGCAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATTGAAC-TTACTTAAG i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003465 273 + 128539186 TCCAAAAGGAATAGGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGGTGATAAAAGCACATGAAGAAGAATTTTTTAGGTCCGGTTCACAGATTCCTTGTGCCTGGGGAAAACTGCAGTAGAAAGTTAGATAATTTCTAATTCGATTAGGGGAAGTCTAATGCAAAAACTTTTTGACTGAGCAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATTGCAC-TTACTTAAG i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158635 273 - 1713548 TCCAAAAGGAATAGATGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGGTGATAAAAGCACATGATGAAGAATTTTTTAGGTCCGGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTAGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTAATGCAAAAACTTTTTGACTGAACAATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTGTTGAAC-TTACTTAAG i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191708 273 - 5424790 TCCAAAAGGAATAGGTGTGTGCAAAGGTTTATGATAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCCTATGATGATAAAAGCACAAGATGAAGAATTTTTTAGGTCCAGTTCACAGATTCCTTGTGCCTGGGGAAAACTGTAGTAGAAAGTTAGATAATTTCTAATTTGATTAGGGGAAGTCTGATGCAAAAACTTTTTGACTGAGCGATCCAATTTGAACCATGAATTTCTGTGCTGGAAGCTTCTATTGAAC-TTACTTAAG i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701051 262 + 29834108 TCCAAAAGGAATAAGTGTGTGCAAAGATTTATGTTAGTGGTGTAGAGAAGTTTTTAAAATAAATGTGCATCTTTTCTTATGGTAATAAAAGCACATTATGAAGAA-TTTTTAGGCCTAGTTCACAGATTACTGGTACCTAGG-----------TAGAAAATTAGATAATTTCTAATTTGATTGGGGGAAGTCTAACAGAAAAACTTTTTAACTGAGAGATCCAATTTGAAACATGAATTTCTGTGCTGGAAGCTTCTATCGAACTTTACTTAGG i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2067742 275 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=6006.000000 s hg38.chr14_KI270725v1_random 55728 1 + 172810 T s panTro5.chr22 4047854 1 + 37823149 T i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10628 1 + 57002 T i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2068017 1 + 72422247 T i ponAbe2.chrUn I 275 I 77 s rheMac8.chr11 28282087 1 + 133663169 T i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27968267 1 + 137757926 T i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5797187 1 + 7948249 T i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672629 1 + 10730278 T i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003738 1 + 128539186 T i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158908 1 - 1713548 T i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191981 1 - 5424790 T i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701313 1 + 29834108 T i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=353070.000000 s hg38.chr14_KI270725v1_random 55729 76 + 172810 CACATCTAAGACCCTCTGGCTGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTTTATATGACACCTAGATC s panTro5.chr22 4047855 76 + 37823149 CACATCTAAGACCTTCTGCCTGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTTTGTATGACACCTAGATC i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10629 76 + 57002 CACATCTAAGACCCTCTGCCTGTCAGTCCAC---------CATTACCCTAACTGTGGTAGAAATTCTTTATATGACACCTAGATC i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28282088 76 + 133663169 CACATCTAAGACCCTCTGCCAGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTGTATATTACACCTAGATC i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27968268 76 + 137757926 CACATCTAAGACCCTCTGCCAGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTGTATATTACACCTAGATC i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5797188 76 + 7948249 CACATCTAAGACCCTCTGCCAGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTGTATATTACACCTAGATC i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672630 76 + 10730278 CACATCTAAGACCCTCTGCCAGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTTTATATTACACCTAGATC i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003739 84 + 128539186 C-CATCTAAGACCCTCTGCCAGTCAGTCCACAGTGGTAGAAATTACCCTAACAGTGGTAGAAATTCTTTATATTACACCTAGATC i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158909 76 - 1713548 CACATCTAAGACCCTCTGCCAGTCAGTCCAC---------CATTACCCTAACAGTGGTAGAAATTCTTTATATTACACCTAGATC i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2191982 76 - 5424790 CACATCTAAGAccctctgccagtcagtccac---------cattaccctaacagtggtagaaattctttatattacacctagatc i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701314 76 + 29834108 CAGATCTAAGACCCTCTGTCAGTCAGTCCAC---------CATTACCCTAACAATAGTAGAAATTCTTTATATTACACCTAGGTC i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2068018 77 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=-55.000000 s hg38.chr14_KI270725v1_random 55805 1 + 172810 -T s panTro5.chr22 4047931 1 + 37823149 -T i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10705 1 + 57002 -T i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2068095 1 + 72422247 -T i ponAbe2.chrUn I 77 I 2842 s rheMac8.chr11 28282164 1 + 133663169 -t i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27968344 1 + 137757926 -t i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5797264 1 + 7948249 -t i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1672706 1 + 10730278 -t i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003823 1 + 128539186 -t i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158985 1 - 1713548 -t i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2192058 1 - 5424790 -t i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701390 1 + 29834108 A- i saiBol1.JH378123 C 0 C 0 e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=3045203.000000 s hg38.chr14_KI270725v1_random 55806 670 + 172810 ---TTTTTTGTTGCAC---------------------------------TTTT-------------------------------AAGCTGTGTAGGAAACACACTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCACTTTTCCAGGGTTTAGGTCAGCTACTGAAAATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAATATTCAATCTGGTGTGGCCCTCTGTATTATAAAATATTTCCCAGATTGTGTTTATCTGAAATACAAATCC---AAGAAGAAGCATGGTGTTAATTGCCGTGTAAAAAAGATTCCAGAGTGAAGAGCTTGAGACGTTCTATTCCTTCCTTCATAGGTTCAGttgtttaacccagcatttttcaaacata-ttttactcctagaacctgttt-ttcatcagacatatttaagaaaaaagcgttttgtagaacacatttggacaaatgATACTTTATATCATTACTTTGTTTTTTAAATTTTAGTTTGACTCAATTTTACAGTTTCAGGATTTTGTTTCTGCTTCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATGTATACATTGTTTCAGTAATGAATTCGTTATGTAAATTTGCCCATCATTCATCTAAAGGGAATAAACGTTAA s panTro5.chr22 4047932 668 + 37823149 ---TTTTTTGTTGCAC---------------------------------TTTT-------------------------------AAGCTGTGTAGGAAACACACTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAACAGTTGTATTTGGTTATGGGGTTTGATCCCACTTGTCCAGGGTTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAATAGTCAATCTGGTGTGGCCCTCT--ATTATAAAATGTTTCCCAGATTGTGTTTATCTGAAATACAAATCC---AAGAAGAAGCATGGTGTTAATTGCCGTGTAAAAAAGATTCCAGAGTCAAGAGCTTGAGAAGTTCTATTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGCACTTTTCAAACATA-CTTTACTCCTAGAACCTGTTT-TGCCTCAGATGTATTTAAGAAAAAAGCGTTTTGTAGAACGCATTTGGACAAACGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTCAATTTTACAGCTTCAGGATTTTGTTTCTGTTTCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATGAATTCATTATGTAAATTTACTAATCAGCCATCTAAAGGGAATAAACGTTAA i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 10706 670 + 57002 ---TTTTTTGTTGCAC---------------------------------TTTT-------------------------------AAGCTGTGTAGGAAACACACTGCCCACATGTTCATACAACACAGAGTGATTATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCACTTGTCCAGGGTTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGAATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAATATTCAATCTGGTGTGGCCCTCTGTATTATAAAATATTTCCCAGATTGTGTTTATCTGAAATACAAATCC---AAGGAGAAGCATGGTGTTAATTGCCGTGTAAAAAAGATTCCAGAGTCAAGAGCTTGAGAAGTTCTATTCCTTCCTTCATAGGTTCAGttgtttaacccagcatttttcaaacata-ttttactcctagaacctgctt-ttcctcagacatatttaagaaaaaagcattttgtagaacacatttggacaaatgATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTCAATTTTACAGTTTCAGGATTTTGTTTCTGTTTCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATGAATTCATTATGTAAATTTGCCCATCATTCATCTAAAGGGAATAAACGTTAA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28282165 700 + 133663169 ---ttttttgttgtac---------------------------------tttttttttttttGCCCCTCAGGGAAATCATGGAAAAGCTGTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGTATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAGTATTCAATCTGGTGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTGTTAATTGCCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATA-CTTTACTCCTGGAACCTGTTT-TTCCTCAGACGTATTTAAGAAAAAAGCGTTTTGTAGACCACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATTAATTCATTACGTAAATTTGCCAATCATTCATCTAAAGGGAATAAATGTTAA i rheMac8.chr11 C 0 I 333 s macFas5.chr11 27968345 702 + 137757926 ---ttttttgttgtac-------------------------------tttttttttttttttGCCCCTCAGGGAAATCATGGAAAAGCTGTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGTATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAGTATTCAATCTGGTGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTGTTAATTGCCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATA-CTTTACTCCTGGAACCTGTTT-TTCCTCAGACGTATTTAAGAAAAAAGCATTTTGTAGACCACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATTAATTCATTACGTAAATTTGCCAATCATTCATCTAAAGGGAATAAATGTTAA i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5797265 699 + 7948249 ---ttttttgttgtac---------------------------------tttttttttttttGCCCCTCAGGGAAATCATGGAAAAGCTGTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGTATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAGTATTCAATCTGGTGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTGTTAATTGCCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATA-CTTTACTCCTGGAACCTGTTT-TTCCTCAGACATATTTAAGAAAAAAGCATTTTGTAGACCACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAA-TAATTCATTACGTAAATTTGCCAATCATTCATCTAAAGGGAATAAATGTTAA i macNem1.NW_012011422v1 C 0 I 331 s cerAty1.NW_011999477v1 1672707 695 + 10730278 ---ttttttgttgtac----------------------------ttttttttttttttttttttACATGAGAGAAATCATGGAAAAGC---------AACACATTACCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGTTACCTCTTACTGGAGTATCCACTCCTGTTTTCATTTCATTCCT-GGGGGCAGCATTCAATCTGGTGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTGGTAATTGCCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATA-CTTTACTCCTGGAACCTGTTT-TTCCTCAGACGTATTTAAGAAAAAAGCATTTTGTAGACCACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAA-TAATTCATTACGTAAATTTGCCGATCATTCATCTAAAGGGAATAAATGTTAA i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27003824 703 + 128539186 ---ttttttgttgtac-----------------------------tttttttttttttttttGCCCCTCAGGGAAATCATGGAAAAGCTGTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATACAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGTATCCATTCCTGTTTTCATTTCATTCCT-GGGAGCAATATTCAATCTGATGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTGTTAACTGCCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCATACATG-CTTTACTCCTGGAACCTGTTT-TTCCTCAGAGGTATTTAAGGAAAAAGCATTTTGTAGAACACACTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAG-TTGACTCAATTTTACAGTTTCAGGATTTAATTTCTGTTGCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATTAATTCATTACGTAAATTTGCCGATCGTTCATCTAAAGGGAATAAATGTTAA i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1158986 703 - 1713548 ---ttttttgttgtac--------------------------ttttttttttttttttttttGCCCCTCAGGGAAATCATGGAAAAGCTGTGTAGGCAGCACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAATTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTATGTCAGCTACTGAAGATTAGGATATCTGGTTACCTGTTACTGGAGTATCCATTCCTGTTTTCATTTCATTCCT-GGGGGCAGCGTTCAATCTGGTGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTGGTAATTGCCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTGTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATA-CTTTACTCCTGGAACCTGTTT-TTCCTCAGACGTATTTAAGAAAAAAGCATTTTGTAGACCACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTGAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTT---------------ATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATTAATTCATTACGTAAATTTGCCGATCATTCATCTAAAGGGAATAAATGTTAA i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2192059 710 - 5424790 ---ttttttgttgcac----------------------ttttttttctttttttttttttttgcccctaagggaaatcgtggaaaagctgTGTAGGAAACACATTGCCCACATGTTCATACAACACAGAGTGAATATCCACTTAGTTCCTAAAAAGTTGTATTTGGTTATGGGGTTTGATCCCAGTTATCCAGGGTTTAGGTCAGCTACTGAAGATTAGGATATCTGGGTACCTCTTACTGGAGTATCCATTTCTGTTTTCATGTCATTCCT-GGGGGCAATATTCAATCTG-TGTGG-CCTCTGTGTTATAAAATGTTTCCCAGATTGTGTTTATCTGAACTACAAATCT---AAGAAGAAGCATGGTATTAATTGTCATGTAAAAATGATTCCAGAGTCAAGAGCTTGAGAAGTTCTCTTCCTTCCTTCATAGGTTCAGTTGTTTAACCCAGTGTTTTTCAAACATA-CTTTACTCCTGGAACCTGTTT-TTCCTCAGAGGTATTTAAGAAAAAAGCATTTTGTAGAACACATTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTCAATTTTACAGTTTCAGGATTTTGTTTCTGTTGCAGGTTTTAAGCTTTTCTTTTAT-----------AAATA---GTTACTTTCCTAGTCTGAAATCTATACATTGTTTCAGTAATTAATTCATTATGCAAATTTGCCGATCATTCATCTGAAGGGAATAAATGTTAA i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17701391 730 + 29834108 TTTTTTGTTGTTGAACttttttttttttttttttttttttttttttttttttttttttttttGCCACTAGGGGAAATCATGGAAAAGCTGTATAGGAAACACATTTCCCACATGTTCATACAACACACAGTGATTATCCACTTACTTCCTAAAGAGCTATATTTGGTTATGGGGTCTGATCCCAGTTGTCCAGGGTTTAGGTCAGATAGTGAAGATTAGGATATCTGGGTACCTCTTACTAGAGTATCCATTCCTGTTCTCAATTCATTCTTGGGGGGCAATATTCAATCTGGTATGG-CCTCT--GTTACAAAATGTTTCCCAAATTGTGTTTATCTGAAATGCAAATCCTAGAAGAAGCAGCATGGTGTAAATTGCCATGTAAAAAT----------------GCATGAGAAGTTCTGTGCCTTCCTTCATAGGTTCAGTTGTTTAACCCATTAGTTTTCAGACATATTTTTACTCTTAGAACCTCTTTGTTCCTCAGAC----TTAGGAAAA---TGTTTTATAGAACAGGTTTGGACAAATGATACTTTATATCATTGCTTTGTTTTTTAAATTTTAGTTTGACTCAATTTTAAAGTTTT-GGATCTTGTTTCTGTTGCAAGTTTTAAGCTTTTCTATTACCTTTTATTCTAAAATAAATGTTACTCTCCTAGTCTGAAATCTATACATTGTTTCAGTAATGAATTCATTGTGTAAGTTTCCCCATCATTCATCTAAAGGGAATACATGTTAA i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=6804.000000 s hg38.chr14_KI270725v1_random 56476 11 + 172810 ATTG-TTTTTTT- s panTro5.chr22 4048600 11 + 37823149 ATTG-TTTTTTT- i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 11376 12 + 57002 ATTGTTTTTTTT- i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27969047 6 + 137757926 ------CTTTTT- i macFas5.chr11 C 0 I 321 s cerAty1.NW_011999477v1 1673402 6 + 10730278 ------CTTTTT- i cerAty1.NW_011999477v1 C 0 I 3 s chlSab2.chr11 27004527 6 + 128539186 ------CTTTTT- i chlSab2.chr11 C 0 I 3 s manLeu1.NW_012107430v1 1159689 6 - 1713548 ------CTTTTT- i manLeu1.NW_012107430v1 C 0 I 3 s colAng1.NW_012115777v1 2192769 6 - 5424790 ------CTTTTT- i colAng1.NW_012115777v1 C 0 I 3 s saiBol1.JH378123 17702121 11 + 29834108 ATTA--TTTTTTT i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e macNem1.NW_012011422v1 5797964 331 + 7948249 I e rheMac8.chr11 28282865 333 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=1600.000000 s hg38.chr14_KI270725v1_random 56487 4 + 172810 AAAT s panTro5.chr22 4048611 4 + 37823149 TAAT i panTro5.chr22 C 0 C 0 s gorGor5.CYUI01002012v1 11388 4 + 57002 AAAT i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr11 27969374 4 + 137757926 AAAG i macFas5.chr11 I 321 C 0 s cerAty1.NW_011999477v1 1673411 4 + 10730278 AAAG i cerAty1.NW_011999477v1 I 3 C 0 s chlSab2.chr11 27004536 4 + 128539186 AAGT i chlSab2.chr11 I 3 C 0 s manLeu1.NW_012107430v1 1159698 4 - 1713548 AAAG i manLeu1.NW_012107430v1 I 3 C 0 s colAng1.NW_012115777v1 2192778 4 - 5424790 AAAT i colAng1.NW_012115777v1 I 3 C 0 s saiBol1.JH378123 17702132 1 + 29834108 -A-- i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e macNem1.NW_012011422v1 5797964 331 + 7948249 I e rheMac8.chr11 28282865 333 + 133663169 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=5176301.000000 s hg38.chr14_KI270725v1_random 56491 1136 + 172810 TTTGACTTGTGTCACATATGAGAATATAAAGTATATCTGTACAATAAAGGAAAATGAAACATCAAAGTATCTACCTCAGATTAAGAAGCAGAACTTggccgggcatggtggctcacccctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggagaccagcttgttcaataaaggaagacctcatctctaacaacaaccacaacagcaaaaaattagccaggcacggtggcacatgcttatagtcccagctactGGtgcagcctcgaactcctggtctcaagctatcttcccacctcagcctcatgttgtagtgaactttgttatgcagtgtctcctattctacatgtgcaggagtatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctctattgagtggcatcataccgttctccaaagcag-ttgtaccaatctacaccctcaccagcagtgaatagtcttcccattg---ttcttcctcaatgaaactagatattcacagccttttaggtttttccta------gagtatgaagtggtatctctttggggttttaatgtttatttccctgattagaattgtagttgagcatcttttattatgtttatggaccatttatgttctctcttctgtgaaattcctattcgggttttttgctcattttaaatgttgttgtttgtgtttttctta------tataggaactcttcacgcattcaagatgcACATATGTTGTTCAGAATAGTACCTGAGACATAGAAACAACTTTGTAAGAATAGCTATCATTATATTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACCTAGTATTCTATTATTTTTAAAATACACAATCTTGAGTAGTCTACATGTTCATAACCATGACATATTCATGTTGCATATGTTCTGTGTCATAACCCAGAACtttc------------ttt-----ttttttttttttttgagatggagttttgcttttgtcacccagtctgcag--caatggcgtgatcttggctaactgcaaactctacctcctgggttcaagagattctcc s panTro5.chr22 4048615 1137 + 37823149 TTTGACTTGTGTCACATATGAGAATATAAAGTATATCTGTACAATAAAGGAAAATGAAACATCAAAGTATCTACCTGAGGTTAAGAAGCAGAACTTggccgggcatggtggctcacacctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggagaccagcttgttcaataaaggaagacctcatctctaacaacaaccacaacagcaaaaaattagccaggcacggtggcacatgcttatagtcccagctactGGtgcagcctcgaactcctggtctcaagccatcttcccacctcagcctcATGTTCTAGtgaactttgttatgcagtgtctcctattctacatgtgcaggagtatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctctattgagtggcatcaaactgttctccaaagcag-ttgtaccaatctacaccctcaccagcagtgaatagtcttcccattg---ttcttcctcaatgaaactagatattcacagccttttaggtttttccta------gagtatgaagtggtatctctttggggttttaatgtttatttccctgattagaattgtagtcgagcatcttttattatgtttatgggccatttatgttttctcttctgtgaaattcctattcgggttttttgctcattttaaatgttgttgtttgtgtttttctta------tataggaattcttcatgcattcaagatgcACGTATGTTGTTCAGAATAGTACCTGAGACATAGAAACAACTTTGTAAGAGTAGCTATCATTATATTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACCTAGTATTCTATTATTTTAAAAATACACAATCTTGAGTAGTCTATATGTTCATAACCATGACATATTCATGTTGCATATGTTCTGTGTCATAACCCAGAACtttc------------ttt-----ttttttttttttt-gagatggagttttgcttttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacctttgcctcctgggttcaagtgattctcc i panTro5.chr22 C 0 n 0 s gorGor5.CYUI01002012v1 11392 1136 + 57002 TTTGACTTGTGTCACATATGAGAATATAAAGTATATCTGTACAATAAAGGAAAATGGAACATCAAAGTATCTACCTCAGGTTAAGAAGCAGAACTTggctgggcatggtggctcacacctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggatttggagaccagcttgttcaataaaggaagacctcatctctaacaacaaccacaacagcaaaaaattagccaggcacggtgacacatgcttatagtcccagctactGGtgcagcctcgaactcctggtctcaagccatcttcccacctcagcctcatgttgtagtgaactttgttatgcagtgtctcctattctacatgtgcaggagtatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctctattgagtggcatcatactgttctccaaagcag-ttgtaccaatctacaccctcaccagcagtgaatagtcttcccattg---ttcttcctcaatgaaactagatattcacagccttttaggtttttccta------gagtatgaagtggtatctctttggggttttaatgtttatttccctgattagaattgtagttgagcatcttttattatgtttatgggccatttatgttttctcttctgtgaaattcctattggagttttttgctcattttaaatgttgttgtttgtgtttttctta------tataggaattcttcacgcaatcaagatgcacgtATGTTGTTCAGAATAGTACCTGAGACATAGAAACAACTTTGTAAGAATAGCTATCATTACATTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAATTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACCTAGTATTCTATTATTTTAAAAATACACAATCTTGAGTAGTCTACATGTTCATAACCATGACATATTCATGTTGCATATGTTCTGTGTCATAACCCAGAACtttc------------ttt-----tttttttttttt--gagatggagttttgcttttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacctctgcctcctgggttcaagagattctcc i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28283198 1154 + 133663169 TTTGACTTGTGTCACAGATGAGAATACGAAGTATATCTGTACAATAAAGGAAAATGAAACATCAAAGTATCTACGACAGGTTAAGAAGCAGAACTTgactgggcatggtggctcacgcctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggaaaccagcttggtcaataaaggaagacctcatctctaacaacaaccacaacaacaaaaaattagccaggcacggtggcacatgcttgtagtcccagctactGGtgcagcttcaaactcctggcctcaagctgtcttcccaactcagcttcATGTTCCACtgaacattgttatgcagtgtctcctattctacatgtgcaggtttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcacgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctatacccttaccagcagtgaatagttttcccattg---ttcttccttaatgaaattagatattcacagcgttttaggtttttgctaaactaggagtatgaagtggtatttctttggggttttaatgttcattt-cctgattagaattgtagttgagcatcttttattgtgtttatgagccatttatgttttctcttctgtcaaattcctatttgggttttttgttcattttaaattttgttgtttgtgtttttctta------tataggaattcttcatgcattcaagatgcGTGGATATTGTTTAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTATTACCATCGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACGTGGTATTGTATTATTTCAAAAATACGCCATCTTGAATAGTCTACATGTTCATAACCATGGCATATTCATGTTGTATATGTTCTGTGTCATAACCCATAACTTTCAATCttttttttttt-----ttttttttttttttgagatggagatttga-tttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacctccgccttccgggttcaagcgattctcc i rheMac8.chr11 I 333 C 0 s macFas5.chr11 27969378 1154 + 137757926 TTTGACTTGTGTCACAGATGAGAATACGAAGTATATCTGTACAATAAAGGAAAATGAAACATCAAAGTATCTACGATAGGTTAAGAAGCAGAACTTgactgggcatggtggctcacgcctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggaaaccagcttggtcaataaaggaagacctcatctctaacaacaaccacaacaacaaaaaattagccaggcatggtggcacatgcttgtagtcccagctactGGtgcagcttcaaactcctggcctcaagctgtcttcccaactcagcttcATGTTCCACtgaacattgttatgcagtgtctcctattctacatgtgcaggtttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcacgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctataccctcaccagcagtgaatagttttcccattg---ttcttccttaatgaaattagatattcacagccttttaggtttttgctaaactaggagtatgaagtggtatttctttggggttttaatgttcattt-cctgattagaattgtagttgagcatcttttattgtgtttatgagccatttatgttttctcttctgtcaaattcctatttgggttttttgttcattttaaattttgttgtttgtgtttttctta------tataggaattcttcttgcattcaagatgcGTGGATATTGTTTAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTATTACCATCGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACGTGGTATTGTATTATTTCAAAAATACGCCATCTTGAATAGTCTACATGTTCATAACCATGGCATATTCATGTTGTATATGTTCTGTGTCATAACCCATAACTTTCAATCttttttttttt-----ttttttttttttttgagatggagatttga-tttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacctccaccttccgggttcaagcgattctcc i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5798295 1148 + 7948249 TTTGACTTGTGTCACAGATGAGAATACGAAGTATATCTGTACAATAAAGGAAAATGAAACATCAAAGTATCTACGACAGGTTAAGAAGCAGAACTTgactgggcatggtggctcacgcctgtaatcccaacactttgggaggcagaagtgggaagatcacttgaagccaggagttggaaaccagcttggtcaataaaggaagacctcatctctaacaacaaccacaacaacaaaaaattagccaggcacggtggcacatgcttgtagtcccagctactGGtgcagcttcaaactcctggcctcaagctgtcttcccaactcagcttcATGTTCCACtgaacattgttatgcagtgtctcctattctacatgtgcaggtttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcacgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctataccctcaccagcagtgaatagttttcccattg---ttcttccttaatgaaattagatattcacagccttttaggtttttgctaaactaggagtatgaagtggtatttctttggggttttaatgttcattt-cctgattagaattgtagttgagcatcttttattgtgtttatgagccatttatgttttctcttctgtcaaattcctatttgggttttttgttcattttaaattttgttgtttgtgtttttctta------tataggaattcttcatgcattcaagatgcGTGGATATTGTTTAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTAGTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACGTGGTATTGTATTATTTCAAAAATACGCCATCTTGAATAGTCTACATGTTCATAACCATGGCATATTCATGTTGTATATGTTCTGTGTCATAACCCATAACTTTCAATC------ttttt-----ttttttttttttttgagatggagatttga-tttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacctccgccttccgggttcaagcgattctcc i macNem1.NW_012011422v1 I 331 C 0 s cerAty1.NW_011999477v1 1673415 1147 + 10730278 TTTGACTTGTGTCACAGATGAGAATATGAAGTATATCTGTACAATAAAGGAAAATGAAACATCAAAGTATCTACGACAGGTTAAGAAGCAGAACTTgactgggcatggtggctcacgcctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggagaccagcttggtcaataaaggaagacctcatctctaacaacaaccacaacaacaaaaaattagccaggcacggtggcacatgcttatagtcccagctactGGtgcagcttcaaactcctggcctcaagctgtcttcccaactcagcctcATGTTCCACtgaacatggttatgcagtgtctcctattctacatgtgcaggtttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctataccctcaccagcagtgaatagttttcccattg---ttcttccttaatgaaattagatattcacagccttttaggtttttgctaaactaggagtatgaagtggtatttctttggggttttaatgttcattt-cctgattagaattgtagttgagcatcttttattgtgtttatgagccatttatgttttctcttttgtcaaattcctatttgggttttttgttcattttaaattttgttgtttgtgtttttctta------tataggaattcttcatgcattcaagatgcGTGTATATTGTTTAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTATTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTACTAGTTTGTGGCTTATTTTTCATTCTGTGATGCAAATTTTTTAACCTGGTATTGTATTATTTCAAAAATACGCCATCTTGAATAATCTACATGTTCATAACCATGACATATTCATGTTGTATATGTTCTGTATCATAACCCATAACTTTCGATC-------tttt-----ttttttttttttttgagatggagatttga-tttgtcaccgagactgcagtgcaatggcatgatcttggctcactgcaacctccaccttccgggttcaagcgattctcc i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27004540 1146 + 128539186 TTTGACTTGTGTCACAGATGAGAATATGAAGTATATCTGTACAATAAAGGAAAATGAAACATCAGAGTATCTACGACAGGTTAAGAAGCAGAACTTgactgggcatggtggctcatgcttgtaatcacagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggagaccagcttggtcaataaaggaagacgtcatctctaacaacaactacaacaacaaaaaattagccaggcacggtggcacatgcttatagtcccagctactGGtacagcttcaaactcctggcctcaagctgtcttcccaactcagcctcATGTTCCACtgaacattgttatgcagtgtctcctattctacatgtgcaggtttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctataccctcaccagcagtgaatagtcttcccattg---ttcttccttaatgaaattagatattcacagccttttaggtttttgcta------gagtttgaagtggtatttctttggggttttaatgttcattt-cctgattagaattgtagttgagcatcttttattatgtttatgagccatttatgttttctcttctgtgaaattcctatttgggttttttgttcattttaaattttgttgtttgtggttttctta------tataggaattcttcatgcattcaagatgcGTGTATATTGTTCAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTATTACCATTGTATTTAATCCTTTGTTTTTATGTCTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACCTGGTATTGT-TTATTTCAAAAATACGCCATCTTGAATAGTCTACATGTTCATAACCATGACATATTCATGTTGTATATGTTCTGTGTCATTACCCATAACTTTCAATC------tttttttttcttttttttttttttgagatggagatttga-tttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacctccgccttccgggttcaagcgattctcc i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1159702 1148 - 1713548 TTTGACTTGTGTCACAGATGAGAATATGAAGTATATCTGTACAGTAAAGGAAAATGGAACATCAAAGTATCTACGACAGGTTAAGAAGCAGAACTTgactgggcatggtggctcacgcctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagttggagaccagcttggtcaataaaggaagacctcatctctaacaacaaccacaacaacaaaaaattagccaggcacagtggcacatgcttgtagtcccagctactGGtgcagcttcaaactcctggcctcaagctgtcttcccaactcagcctcATGTTCCACtgaacattgttatgcagtgtcttctattctacatgtgcaggtttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctataccctcaccagcagtgaatagttttcccattg---ttcttccttaatgaaattagatattcacagccttttaggtttttgctaaactaggagtatgaagtggtatttctttggggttttaatgttcattt-cctgattagaattgtagttgagcatcttttattgtgtttatgagccatttatgttttctcttttgtcaaattcctatttgggttttttgttcattttaaattttgttgtttgtgtttttctta------tataggaattcttcatgcattcaagatgcGTGTATATTGTTTAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTATTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCAAATTTTTTAACCTGGTATTGTATTATTTCAAAAATACGCCATCTTGAATAATCTACATGTTCATAACCATGACATATTCATGTTGTATATGTTCTGTATCATAACCCATAACTTTCAATC------ttttt-----ttttttttttttttgagatggagatttga-tttgtcacctaggctgcagtgcaatggcatgatcttggctcactgcaacctccaccttccgggttcaagcgattctcc i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2192782 1136 - 5424790 TTTGACTTGTGTCACAGATGAGAATATGAAGTATATCTGTACAATAAAGGAAAATGAAACATCAACGTATCTACGACAGGTTGAGAAGCAGAACTTgactgggcatggtggctcacgcctgtaatcccagcactttgggaggcagaagtgggaagatcacttgaagccaggagtt-gagaccagcttggtcaat-aaggaagacctcatctctaacaacaaccacaacaacaaaaaatgagccaggcacggtggcacgtgattatagtcccagctactGGtgcagcttcagactcctggcctcaagctgtcttcccaactcagcttcATGTTCCACtgaacattgttatgcagtgtctcctattctacatgtgcagctttatttttacagtatgtacctg-gagtggaattgcttggtcattgggcatgtgtgtgttcagctttattgagtggcatcaaactgttctccaaagcag-ttataccaatctataccctcaccagcagtgaatagtcttcccattg---ttcttccttaatgaaattagatattcacagccttttaggtttttgcta------gagtatgaagtggtatttctttggggttttaatattcgttt-cctgattagaattgtagttgagtatcttttattatgtttatgagccatttatgttttcttttctgtgaaattcctatttgggttttttgttcattttaaattttgttgtttgtgtttttctta------cataggaattcttcatgcattcaagatgcATGTGTATTGTTTAGAATAGTACCTGAAACATAGAAACAACTTTGTAAGAATAGCTATCATTGTATTACCATTGTATTTAATCCTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTCATTCTGTGATGCTAATTTTTTAACCTGGTATTATATTATTTCAAAAATATGCCATCTTGAATAGTCTACATGTTCATAACCGTGACATATTCATGTTGTATATGTTCTGTGTCATAACCCATAACTTTCAATC----------G-----TTGtttttttttttgagatggagatttga-tttgtcacccaggctgcagtgcaatggcgtgatcttggctcactgcaacttctgccttctgggttcaagcgattctcc i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17702133 1125 + 29834108 ---------------ATATGAGAATATGAAGTATATCTGTACAATAAAGGAAAATAAAACATCTAAATGTCTACCACAGGTTAAGAAGCAGAACTTGG-Tgggcatggtggctcacac---------cagcactttgggaggcagaagtgagaagattacttgaagccaggagttggagaccagcttggtcaataaagaaagacctcacctgtgacaaccaccgccacaacaaaacattagccaggcatggtggcttatgcttatattcccagatactcgtgcagcctcaaactcctggcctcaagcgatccttccacctcagcctcAGGCTCTAGtgaacattgttatgaactgtctcctattctacatgtatgggagtatttttacattatatacctgagagtgggattgcttggtcattgggcatgtgcgtgttcagccctattgagtagcatcaaactgttctccaaagcagtttgtaccaatctgtatccttaccagcagtgaatagtcttctcattgttcttcttcctcaaaaaatctagatattgattgccttttaggtttttgctaaacta-aaatatgaagtggtatctcttcagggttttaatttttattttcctgattagaattgcatttgagcatcttttattaggttgatgggctatttatgttttctcttctgtgaaatt----tgtggggtttttgctcattttaaattttgttgtttgtgtttttcttattgatttgtaggacttcttaatgcattTGAGACTCATGTATATTGTTTAGAATAGTACCTGAA----AGAAACAACTGTGTAAGAATAGC-ATCATTGTATTACCATTGTATTTAATACTTTGTTTTTATGTGTTACAATTATCTTCTGCTAGTTTGTGGCTTATTTTTTATTCCGTGATGCTAATTTTTTAACCTAGTATTCTATTATTTGGAAAATACTCAATCTTGAATAGTCTACCTGTTCATAACCATGATATATTCATGTTGCCTGTGTTCTGTGTCATAACCCATAACTTTCAGTC------ttttg-----ttttgttttgttttgagacggactctcct-cctgtcgcccaagctgcactgcagtggtgtcatcttggctcactgcgacctctgcctcccaagttcaagcgattctcc i saiBol1.JH378123 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=813053.000000 s hg38.chr14_KI270725v1_random 57627 189 + 172810 tgcctcagcctcctgagtagctgggattacaggcacctgccaccatgcccagctaatttttgta--tttttagtaatgacgttgtttcgccatgttggccaggctgttctcgaaatcctgacctcaggttatccgcccaccttggcctcccaaaa-tgttgagattacaggcatgagcagctgcacatggcc s panTro5.chrY 293881 186 + 26350515 tgcctcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctaatttttgta--tttttagtaatga---tgtttcaccatgttggccaggctggtctcaaaatcctgaccttaggttatccgcccaccttggcctcccaaag-tgttgagattacaggcatgagcagctgcacccggcc i panTro5.chrY I 521 C 0 s gorGor5.CYUI01002012v1 12528 189 + 57002 tgcgtcagcctcccgagtagctgggattacaggcacctgccaccatgcccagctaatttttgta--tttttagtaatgacgttgtttcgccatgttggccaggctggtctcgaaatcctgacctcaggttatccgcccaccttggcctcccaaag-tgttgagattacaggcatgagcagctgcacccggcc i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28284352 190 + 133663169 agcctcagcctcccaagtagctgggattgcaggcatccaccatcacgcctgactagtttttgta--tttttagtagagacgatgtttcaccatgttggccaggctgatctcgaactcctgacctcaggttatccacccaccttggcctcccaaagttgctgggattacaggtgtgagcagctgcaccaggcc i rheMac8.chr11 C 0 C 0 s macFas5.chr11 27970532 190 + 137757926 agcctcagcctcccaagtagctgggattgcaggcatccaccaccacgcctgactagtttttgta--tttttagtagagacgatgtttcaccatgttggccaggctgatctcgaactcctgacctcaggttatccacccaccttggcctcccaaagttgctgggattacaggtgtgagcagctgcaccaggcc i macFas5.chr11 C 0 C 0 s macNem1.NW_012011422v1 5799443 190 + 7948249 agcctcagcctcccaagtagctgggattgcaggcatccaccaccacgcctgactagtttttgta--tttttagtagagacgatgtttcaccatgttggccaggctgatctcgaactcctgacctcaggttatccacccaccttggcctcccaaagttgctgggattacaggtgtgagcagctgcaccaggcc i macNem1.NW_012011422v1 C 0 C 0 s cerAty1.NW_011999477v1 1674562 189 + 10730278 tgcctcagcctcccaagtagctggggttacaggcacccgccaccacgtccggctagtttttgta--tttttagtagagacgatgtttcggcatgttggccaggctggtctcgaactcctgacctcaggttatccgcccaccttggcctcccaaag-tgttgggattacaggtgtgagcaactgcaccaggcc i cerAty1.NW_011999477v1 C 0 C 0 s chlSab2.chr11 27005686 189 + 128539186 tgccacagcctcccaagtagctggggttacaggcggccaccagcacgtccggctagtttttgta--tttttagtagagacgatgtttcggcatgttggccaggctggtcttgaactcctgacctcaggttatccgcccaccttggcctcccaaag-tgttgggattacaggtgtgagcagctgcaccaggcc i chlSab2.chr11 C 0 C 0 s manLeu1.NW_012107430v1 1160850 189 - 1713548 tgcctcagcctcccaagtagctggggttacaggcacccgccaccacgtccggctagtttttgta--tttttagtagagacgatgtttcggcatgttggccaggctggtctcgaactcctgacctcaggttatccgctcaccctggcctcccaaag-tgttgggattacaggtgtgagcaactgcaccaggcc i manLeu1.NW_012107430v1 C 0 C 0 s colAng1.NW_012115777v1 2193918 189 - 5424790 tgcctcagcctcccaagtagctgggattacaggcacccgccaccacgcctggctagtttttgta--tttttagtagagacgatgtttcgccatgttggccaggctggtctcgaactcctgacctcaggttatccgcccaccttggcctcccaaag-tgttgggattacaggtgtgagcagctgcaccaggcc i colAng1.NW_012115777v1 C 0 C 0 s saiBol1.JH378123 17703258 190 + 29834108 tgcctcagtctcc-aagtagctaggattacaggtgcctgccactatgcctggctaatttttgtatttttttagtagagatggtgtttcatcatgttggccagactggtctccaactctggacctcaggtgatccgctggccgtggccttccaaag-tgctgggattacaggagtgagccactgagtctggcc i saiBol1.JH378123 C 0 N 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=683630.000000 s hg38.chr14_KI270725v1_random 57816 191 + 172810 AACTTTCAGTCTTAAGTACCA-TTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAA-TTAACTCATTTAATCCCCTATTCAAACTGCTACAATTTTATTTTCAGTGTTGTCGCCTGGTTGTAGATGCATTTGTCTCTCCAAATGCACTGTGATTATTTCAAAGACAAAACATTTTTGGCATTGTGat s panTro5.chrY 294067 191 + 26350515 AACTTTCAGTCTTAAGAACCA-TTTTTTGCTGCTGTTTCCTTTTTTGAACCCCAGGAAAACA-TTAACTCTTTTAATCCCCTATTCAAACTGCTACAATTTTATTTTCAGTGTTGTCGCCTGGTTGTAGATGCATTTGTCTCTCCAAATGCACTGTGATTTTTTCGAAGACAAAACATTTTTGGCATTGTGat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 12717 190 + 57002 AACTTTCAATCTTAAGTACCA-TTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAA-TTAACTCATTTAAT-CCCTATTCAAACTGCTACAATTTTATTTTCAGTGTTGTCGCCTGGTTGTAGATGCATTTGTCTCTCCAAATGCACTGTGATTATTTCGAAGACAAAACATTTTTGGCATTGTGat i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr11 28284542 184 + 133663169 AACTT------TTAAGTACCA-TTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAAGTTAACCCATTTAATCCCCTGTTCAAACTGCTACAGTTTTATTTTCGGTGTTGTCGCCTAGTTGTAGG--TATTTATCTCTCCAAATGTACAGTGATTATTTCGAAGTCAAAACGTTTTTGGCATTGTGAT i rheMac8.chr11 C 0 N 0 s macFas5.chr11 27970722 184 + 137757926 AACTT------TTAAGTACCA-TTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAAATTAACCCATTTAATCCCCTGTTCAAACTGCTACAGTTTTATTTTCGGTGTCGTCGCCTAGTTGTAGA--TATTCATCTCTCCAAATGTACAGTGATTATTTCGAAGTCAAAACGTTTTTGGCATTGTGAT i macFas5.chr11 C 0 N 0 s macNem1.NW_012011422v1 5799633 185 + 7948249 AACTT------TTAAGTACCATTTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAAATTAACCCATTTAATCCCCTGTTCAAACTGCTACAATTTTATTTTCGGTGTTGTCGCCTAGTTGTAGA--TATTTATCTCTCCAAATGTACAGTGATTATTTCGAAGTCAAAACGTTTTTGGCATTGTGAT i macNem1.NW_012011422v1 C 0 N 0 s cerAty1.NW_011999477v1 1674751 186 + 10730278 AACTT------TTAAGTACCA-TTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAAATTAACCCATTTAATCCCCTGTTCAAACTGCTACAATTTTATTTTCAGTGTTGTCGCCTAGTTGTAGATGTATTTATCTCTCCAAATGTACTGTGATTATTTCGAAGTCAAAACGTTTTTGGCATTGTGAT i cerAty1.NW_011999477v1 C 0 N 0 s chlSab2.chr11 27005875 186 + 128539186 AACTT------TTAAGTACCA-TTTTTTGCTGCTGTTTTTTATTTTGAACCCCAGGAAAAAAATTAACCCATTTAATCCCCTGTTCAAACTGCTACAATTTTTTTTTCAGTGTTGTCGCCTAGTTGTAGATGTATTTATCTCTCCAAATGTACTGTGATTATTTCGAAGTCAAAACGTTTTTGGCATTGTGAT i chlSab2.chr11 C 0 N 0 s manLeu1.NW_012107430v1 1161039 186 - 1713548 AACTT------TTAAGTACCA-CTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAAATTAACACATTTAATCCCCTGTTCAAACTGCTACAATTTTATTTTCAGTGTTGTCGCCTAGTTGTAGATGTATTTATCTCTCCAAATGTACTGTGATTATTTCGAAGTCAAAACGTTTTTGGCATTGTGAT i manLeu1.NW_012107430v1 C 0 N 0 s colAng1.NW_012115777v1 2194107 186 - 5424790 AACTT------TTAAGTACCA-TTTTTTGCTGCTGTTTCTTTTTTTGAACCCCAGGAAAAAAATTAACCCGTTTAATCCCCTGTTCAAACTGCTACAATTTTATTTTTGGTGTTGTCGCCTAGTTGTAGATGTATTTATCTCTCCAAATGTACCGTGATTATTTCGAAATCAAAACGTTTTTGGCATTGTGAT i colAng1.NW_012115777v1 C 0 N 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=15333.000000 s hg38.chr14_KI270725v1_random 58007 160 + 172810 atatatatacatatatatatatatatatatatgtatatatatgtatatgtatgtatatatatgtatataatatatattgtataaat----atttatattttatatatcatataaaaattatatataaaaattatatatatatatatataaatGCCACTTATCCC s panTro5.chrY 294258 78 + 26350515 atatatata---------------------------------------------------------------------------at----atttatattt-atatatcatataaaaattatatgtaaaaattatatatatata------aatGTCACTTATCGC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 12907 152 + 57002 atatatatatatatatatgtatatatatgtatata---------atatatatatgtatatatgtatataatatatattgtataaatattaatttatgttttatatatcatataaaaattatatat-aaaattatatatatata--tataaatGCCACTTATCCC i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=13143.000000 s hg38.chr14_KI270725v1_random 58167 24 + 172810 TAATATAGGGACTCGATTAGTTTC s panTro5.chrY 294336 24 + 26350515 TAATATAGGGACTCGATTAGTTTC i panTro5.chrY C 0 C 0 s panPan2.chr11 88564488 24 + 134183262 taatataGGGACTCAATTAGTTTC i panPan2.chr11 N 0 C 0 s gorGor5.CYUI01002012v1 13059 24 + 57002 TAATATAGGGACTCGATTAGTTTC i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=910.000000 s hg38.chr14_KI270725v1_random 58191 1 + 172810 T s panTro5.chrY 294360 1 + 26350515 T i panTro5.chrY C 0 C 0 s panPan2.chr11 88564512 1 + 134183262 T i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13083 1 + 57002 T i gorGor5.CYUI01002012v1 C 0 C 0 s papAnu3.chr8 108532255 1 - 139646187 T i papAnu3.chr8 N 0 I 100 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=52068.000000 s hg38.chr14_KI270725v1_random 58192 100 + 172810 GCTAGTGTGGGGACAAGTCTTATCATGGCTAGGGGCCACGATGGTAGGAGCAGTCAGAGGATTTCTTGCATTGTGATGAGTGCATATATGTTAAATGAGC s panTro5.chrY 294361 100 + 26350515 GCTAGTGTGGAGACAAGTCATATCATGGCTAGGGGCCATGATGGTGGGAGCAGTTAGAGGATTTCTTGCATTGTGATGAGTGCATATAAGTTAAATGAGC i panTro5.chrY C 0 C 0 s panPan2.chr11 88564513 100 + 134183262 GCTAGTGTGGAGACAAGTCATATCATGGCTAGGGGTCATGATGGTAGGAGCAGTCAGAGGATTTCTTGCGTTATGATGAATGCATATAAGTTATATGAGC i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13084 100 + 57002 GCTAGTGTGGAGACAAGTCATATCATGGCTAGGGGCCATGATGGTAGGAGCAGTCAGAGGATTTCTTGCATTGTGATGAGTGCATATAAGTTAAATGAGC i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e papAnu3.chr8 108532256 100 - 139646187 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=1898.000000 s hg38.chr14_KI270725v1_random 58292 3 + 172810 CAC s panTro5.chrY 294461 3 + 26350515 CAC i panTro5.chrY C 0 C 0 s panPan2.chr11 88564613 3 + 134183262 CAC i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13184 3 + 57002 CAC i gorGor5.CYUI01002012v1 C 0 C 0 s papAnu3.chr8 108532356 3 - 139646187 CGT i papAnu3.chr8 I 100 N 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=12210.000000 s hg38.chr14_KI270725v1_random 58295 26 + 172810 TTATCAGTAGATTTGATAGCAGGATA s panTro5.chrY 294464 26 + 26350515 TTATCAGTAGATTTGATAGGAGAATA i panTro5.chrY C 0 C 0 s panPan2.chr11 88564616 26 + 134183262 TTATGAGTAGATTTCATAGCAGGATA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13187 26 + 57002 TTATCAGTAGATTTGATAGCAGGATA i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=4018.000000 s hg38.chr14_KI270725v1_random 58321 4 + 172810 ACAG s panTro5.chrY 294490 4 + 26350515 ACAG i panTro5.chrY C 0 C 0 s panPan2.chr11 88564642 4 + 134183262 ACAG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13213 4 + 57002 ATAG i gorGor5.CYUI01002012v1 C 0 C 0 s chlSab2.chr1 81224371 4 + 126035930 ACAA i chlSab2.chr1 N 0 C 0 s colAng1.NW_012116622v1 190215 4 + 3898586 acaa i colAng1.NW_012116622v1 N 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I e nomLeu3.chr7b 114487759 44409 + 115148730 I a score=344276.000000 s hg38.chr14_KI270725v1_random 58325 216 + 172810 TTATATCACTGATACCTAGGCAGTACATGACACTCTCTAAAGAATAGATTAATCCTCATGCTCTTCATCTTCCTCCTAATCTCTTTACCTGTGCTGCCCTCCAGCTTTCAAAGTGCTCT--GAGTCATCACTTACACAGTGTTCCTTAGCTGCCCCTTCAGTGGG----------------CCAGTGTTTCTGTGCCCCAGTGTTCCTGAGAGTTAGAACACAGAAAACAGAGC s panTro5.chrY 294494 215 + 26350515 TTATATCACTGATACCTAGGCAGTACATGACACTCGGTAAAGAATAGATTAATCCTCATGCTTTTCATCTTCCTCCTAATCTCTTTACCTGTGCTGCCCTCCAGCTTTCAAAGTGCTCT--GAGTCATCACTTACACAGTGTTCCTTAGCTGCCCCTTCAGTGGG----------------CCAGTGTTTCTGT-TCCCGGTGTTCCTGAGAGTTAGAACACAGAAAACAGAGC i panTro5.chrY C 0 C 0 s panPan2.chr11 88564646 218 + 134183262 TTATATCATTGATACCTAGGCAGTACATGACACTCAAGAAAGAATAGATTAATCCTCATGCTCTTCATCTTCCTCCTAATCTCTTTACCTGTGCTGCCCTCCAGCTTTCAAAGTGCTCTCAGAGTCATCACTTACACAGTATTTCTTTGCTTCCCCTTCAGTGGG----------------CCAGTGTTTCTGTGCCCCAGTGTTCCTGCGAGATAGAACACAGAAAACAGAGC i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13217 216 + 57002 TTATATCACTGATACCTAGGCAGTACATGACACTCGGTAAAGAATAGATTAATCCTCATGCTCTTCATCTTCCTCCTAATCTCTTTACCTGTGCTGCCCTCCAGCTTTCAAAGTGCTCT--GAGTCATCACTTACACAGTGTTCCTTAGCTGCCCCTTCAGTGGG----------------CCAGTGTTTCTGTGCCCCAGTGTTCCTGAGAGTTAGAACACAGAAAACAGAGC i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 27530 204 + 112108 TTTTATCATTGATACCTAGGCACTACATGACATCCAGTACAGAGCAGAATAATCCTCATGCTCTTCATCTTCCCCCTAATCTCTTTAACTGTGCCATCCTCCAGCTCTCAAAGTGCTCTCAGAGCCATCACTTACCCAGTGTTCCTTAGTTGCCCCTC-----------------------ACAGTGTCTGTGAGCCCC-GTGCTCCTGAGTGT------ATGGCAAATGAAGC i nomLeu3.chrUn_GL397743_2 n 44409 C 0 s chlSab2.chr1 81224375 218 + 126035930 TTATATCATTGATACCTAGGCAGTACATGACACTCAGTAAAGAATAGATTAATCCTCGTGTTCTTTATCTTTCTCCTAATTTCTTTACCTGTGCTGCCCTCCAGCTTTCAAAGTGCTCTCAGAGTCATCACTTACACAGTGTTCTTTAGTTGCCCCTTCAGTGGG----------------CCAGTGTTTCTGTGCACCAGTGTTCCTGAGAGTTATAACACAGAAAACAGAGC i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 190219 234 + 3898586 ttatatcattgatgcctaggcagtacatgacactcagtaaaGAATAGATTAATCCTCATGTTCTTCATCTTTCTCCTAATCTCTTTACCTGTGCTGCCCTCCAGCTTTCAAAGTGCTCTCAGAGTCATCACTTACACAGTGGTCTTTAGCTGCCCCTTCAGTGGGCCAGTGTTTCTGTGCCCCAGTGTTTCTGTGCCCCAGTGTTCCTGAGAGTTATAACACAGAAAACAGAGT i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2068096 2842 + 72422247 I a score=5348.000000 s hg38.chr14_KI270725v1_random 58541 2 + 172810 AG s panTro5.chrY 294709 2 + 26350515 AG i panTro5.chrY C 0 C 0 s panPan2.chr11 88564864 2 + 134183262 AG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13433 2 + 57002 AG i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2070938 2 + 72422247 AG i ponAbe2.chrUn I 2842 I 74 s nomLeu3.chrUn_GL397743_2 27734 2 + 112108 AG i nomLeu3.chrUn_GL397743_2 C 0 C 0 s chlSab2.chr1 81224593 2 + 126035930 AG i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 190453 2 + 3898586 AG i colAng1.NW_012116622v1 C 0 C 0 a score=124705.000000 s hg38.chr14_KI270725v1_random 58543 73 + 172810 GCTCTTGCCCACATCACAGAACATCTTT--GTCTCCCTGTGGATCCCGCACATTTGTTCATTAGAGCTCAGGAAT s panTro5.chrY 294711 73 + 26350515 GCTCTTGCCCACATCACAGAACATCTTT--GTCTCCCTGTGGATCCCACACATTTGTTCATTAGAGCTCAGGAAT i panTro5.chrY C 0 C 0 s panPan2.chr11 88564866 73 + 134183262 GCTGTTGCCCACATCACAGAACATCTTT--GTCTCCCTGTGGATCTCGCACATTTGTTCATTAGAGCTCAGGAAT i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13435 73 + 57002 GCTCTTGCCCACATCACAGAACATCTTT--GTCTCCCTGTGGATCCCACACATTTGTTCATTAGAGCTCAGGAAT i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 27736 75 + 112108 GCTCTTATCCACTGCTCCAAATATCTTTTCTTCTCCCTGTGGAACCCACACATTTGTTCATTAGAGCTCAGGAAC i nomLeu3.chrUn_GL397743_2 C 0 C 0 s chlSab2.chr1 81224595 73 + 126035930 GCTCTTGCCCACATTACAGAACATCTTT--GTCTCCCTGTGGATCCCACACATTTGTTCATTAGAGCTCAGGAAT i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 190455 73 + 3898586 GCTCTTGCCCACATTACAGAACATCTTT--CTCTCCCTGTGGATCCCACACATTTGTTCATTAGAGCTCAGTAAT i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2070940 74 + 72422247 I a score=2548.000000 s hg38.chr14_KI270725v1_random 58616 1 + 172810 T s panTro5.chrY 294784 1 + 26350515 T i panTro5.chrY C 0 C 0 s panPan2.chr11 88564939 1 + 134183262 T i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13508 1 + 57002 T i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2071014 1 + 72422247 T i ponAbe2.chrUn I 74 I 29 s nomLeu3.chrUn_GL397743_2 27811 1 + 112108 T i nomLeu3.chrUn_GL397743_2 C 0 C 0 s chlSab2.chr1 81224668 1 + 126035930 T i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 190528 1 + 3898586 T i colAng1.NW_012116622v1 C 0 C 0 a score=44452.000000 s hg38.chr14_KI270725v1_random 58617 27 + 172810 GCCAGAGACTGGCTTTTCTGGCAATGG s panTro5.chrY 294785 25 + 26350515 GCCAGA--CTGGCTTTTCTGGCAATGG i panTro5.chrY C 0 C 0 s panPan2.chr11 88564940 27 + 134183262 GCCAGAGTCTGGCTTTTCTCACAATGG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13509 27 + 57002 GCCAGAGACTGGCTTTTCTGGCAATGG i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 27812 27 + 112108 GCCAGAGACTGGCTTTCCTGGCAATGC i nomLeu3.chrUn_GL397743_2 C 0 C 0 s chlSab2.chr1 81224669 27 + 126035930 GCCAGAGACTGGCTTTTCTGGCAATGG i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 190529 27 + 3898586 ACCAGAGACTGGCTTTTCTGGCAATGG i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2071015 29 + 72422247 I a score=2548.000000 s hg38.chr14_KI270725v1_random 58644 1 + 172810 A s panTro5.chrY 294810 1 + 26350515 A i panTro5.chrY C 0 C 0 s panPan2.chr11 88564967 1 + 134183262 A i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13536 1 + 57002 A i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2071044 1 + 72422247 A i ponAbe2.chrUn I 29 I 3210 s nomLeu3.chrUn_GL397743_2 27839 1 + 112108 A i nomLeu3.chrUn_GL397743_2 C 0 C 0 s chlSab2.chr1 81224696 1 + 126035930 A i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 190556 1 + 3898586 A i colAng1.NW_012116622v1 C 0 C 0 a score=981871.000000 s hg38.chr14_KI270725v1_random 58645 677 + 172810 CACTAGA-TTCTTCAGAAGAATATTGG--TTGAAATCTTC--------------------------------------------------------------------------------------------------------------AGTGATGGGGTCTATGAGGTAATTCAGTCAAATGAGGCAGGTGAGTTCCTTCTGGAAGGCTTCTGGGAAGTCTAAGTCCATTTTTCTGAGGGAAGAAAACCAGAA------------GAATTTATTCTTATGCCATAGAGAGACAAAGATCTACACAAAATTTGAAACAGGTTTTGAGTAG-----------------------GATCCGCTCACAGGTTTAAATCTATAGCAGGATACGATTTTATTTTGCACATAAC-AAAATGAAAAACTGAGGCACAGAA-----TTCAAGCTTTGCAGAAAAATGTGTTGGCTCCCTAACCAACACTCACACACACAC----CTACTTTCCCAAATTCTTTCCTCCTGTATGAAAAAA----CTT----AAggctgggcacggtggctcatgcttgtaat-ccagcactttgggaggctgaggcagcaggattgtttgatccaaggagtccaagaccagcctgggcaacatgatgagaccctgtctct----acaaaaagaaaaggaggaaaaa-attagctgag----------catgccaatactcccagctactagggaggctgaagtgagacgtttgcttgagcccaggaggttaaggcagcagtgagccataatccagccactacactctagcctgaatgacagagcaagact--gtctcaaaaatgaacaaagaaagaaa s panTro5.chrY 294811 777 + 26350515 CACTAGA-TTCTTCTGAAGAATATTGG--TTGAAATCTTCCTGCTGTG-CAGTTCCCT----------GCA-----TGCAGGGCAGGAGTGTGTGCTTCTTCCCAGCAAAGGCAGAGGCAGGGCCTACAGAAGCTGTGCCCACAGCCTTTAGTGATGGGGTCTATGAGGTAATTCAGACAGATGAGGCAGGTGAGTTCTTTCTGGAAGGCTTGTGGGAAGTCTAAGTCCATTTTTCTGAGGGAAGAAAACCAGAA------------GAATTTATTCTTATGCCATAGAGAGACAAAGATCTACACAAAGTTTGAATCAGGTTTTGAGTAG-----------------------GATCTGCTCACAGGTTTAAATCTATAGCAGGATACAATTTTATTTTGCGCATAAC-AAAATGAAAAACTGAGGCACAGAA-----TTCAAGCTTTGCAGAAAAATATGTTGGCTCCCTAACCAacacacacacacacacacacCTACTTTCCCAAATTCCTTCCCCCTGTATGAAAAAA---ACTT----AAGGATgggcacagtggctcatgcttgtaat-ccagcactttgggaggctgaggcagcaggattgcttgatccaaggaatccaagacgagcctgggcaacaggatgagaccctgtctct----acaaaaagaaaaggaggaaaaa--ttagctgag----------catgccaatagtcccagctactagggaggctgaggtgagaggattgtttgagcccaggaggtcaaggcggcagtgagccgtaatccagccactacactctagcctgaatgacagaccaagactctgtctcaaaaatgaacaaagaaagaaa i panTro5.chrY C 0 C 0 s panPan2.chr11 88564968 781 + 134183262 CACTAGA-TTCTTCAGAAGAATATCGGTTTTGAAATCTTCCTGCTGTGACGGTTCCCT----------GCA-----TGCAGGGCAGGAGTGTGGGCTTCTTCCCAGCAAAGGCAGAGGCAGGGCCTACAGAAACTCTGCCAGCAGCCTATAGTGATGGGGTCTATGAGGTAATTCAGGCAGATGAGGCAGGTGAGTTCTTTCTGGAATGCTTGTGGGAAGTCTAAGTCCATTTTTCTGAGGGAAGAAACCCAGAA------------GAATTTATTCTTATGCCATAGAGAGACAAAGATCTATGCAAAGTTTGAATCAGGTTTTGAGTAG-----------------------GATCAGCTCACAAGTTTAAATCTATAGCAGGATAGAATTTTATTTTACACATAACGAAAATGAAAAACTGAGGCACAGAA-----TTCAAGCTTTGCAGAAAAATGTGTTGGCTCCCTAACGAACACACACACACAC------CTACTTTCCCAAATTCTTTCCTCCTGTATGAAAAAA---ACTT----AAggctgggcacagtggctcacgcttgtaat-ccagcactttgggaggctgaggcagcaggaatgcttgatccaaggacttcaagaccagcctgggcaacatgatgagaccctgtctctaacaaaaaaaaaaaaaagaggaaaaaaattacctgag----------catgcctatagtcccagctactagggaggctgaggtgagaggattgcttgagcccaggaggtcaaggcggcagtgagccataatccagccgctacactctagcctgagtgacagagcaagactctgtcttaaaaatgaacaaagaaagaaa i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 13537 780 + 57002 CACTAGA-TTCTTCAGAAGAATATTGG--TTGAAATCTTCCTGCTGTGACAGTTCCCT----------GCA-----TGCAGGGCAGGAGTGTGTGCTTCTTCCCAGCAAAGGCAGAGGCAGGGCCTACAGAAACTGTGCCCGCAGCCTATAGTGATGGGGTCTATGAGGTAATTCAGGCAGATGAGGCAGGTGAGTTCTTTCTGGAAGGCTTGTGGGAAGTCTAAGTCCATTTTTCTGAGGGAAGAAAACCAGAA------------GAATTTATTCTTATGCCATAGAGAGACAAAGATCTACACAAAGTTTGAATCAGGTTTTGAGTAG-----------------------GATCTGCTCACAGGTTTAAATCTATAGCAGGATACGATTTTATTTTGCACATAACAAAAATGAAAAACTGAGGCATAGAA-----TTCAAGCTTTGCAGAAAAATGTGTTGGCTCCCTAACCAacacacacacacacacacacCTACTTTCCCAAATTCTTTCCTCCTGTATGAAAAAA---ACTT----AAGTctgggcacagtggctcatgcttgtaat-ccagcactttgggaggctgaggcagcaggattgcttgatccaaggagtccaagagcagcctgggcaacatgatgagaccctgtctct----acaaaaagaaaaggaggaaaaa-attagctgag----------catgccaatagtcccagctactagggaggctgaggtgagaggattgcttgagcccaggaggtcaaggcggcagtgagccataatccagccactacactctagcctgaatgacagagcaagactctgtctcaaaaatgaacaaagaaagaaa i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 27840 774 + 112108 CACTAGATTTCTTCAGAAGAATATTGGTTTTGATGTCCTCCTGCTGTGACAGTTCCCCCGCATGTGGGGCAGAAGGT-------AGGAATTTTGGCTTCTTCCCAGGAAAGGCAGAGACAGGGCCTACAGAAGCTAGGGCTGCAGCCTGTAGTGGTGGGGTCTACGAGTTAGTTCAGACAGAAGAGGCAGATGGGTTCTTTCTGGAAGGCTTGTGTGATGTCTGAGAACATTTTCCTGAAGGAAGGAAATTAGGGAAGGTATGATTCAAACTTCATCTTATGCCTTGGGGAAACAAAGACCAAAGCAAAATTTGACTCAGGTTGTGACTCA-----------------------G------TGATAAACTTCTGTCTAGAGTAGAACA-GGCTTTATTTTGTAGAAGAC-AAAAATAGAACCTGAGGCACAAAGAGAGCTCTTGGATCTGTAGGTAAAATTGTTGGGTTCATGCACAACTCACA-GGGCACTACAACCTACCAT----------TTTCTTTTGCATAGAAAAATGAACCTCAGAGAggccaggtgtgatggctcacacctgtaatcccagcactttgggatgccaaggc--------tggtagatc----aggttagagaccagcctggccaatatggggaaaccctgcctct----actaaa-------gacacaaaa-atcatccaggagaggtggcacatgcctgtaattccagaaacttagaacac-ggggcaggagactcacttgaaccctgaattt-------gcagtcagctgagattgagccactgctcttcagcctagataataaagcaagaag------taagaaagaaagaaagaatgag i nomLeu3.chrUn_GL397743_2 C 0 C 0 s chlSab2.chr1 81224697 785 + 126035930 CGCTAGA-TTCTTCAGAAGAATATTGGTTTTGAAATCTTCCTGCTGTGACGGTTCCTT----------TCA-----TGCAGGGCAGGAGTATGGGCTTCTTCCCAGCAAAGGCAGAGGCAGGGCCTACCGAAGCTGTGCCCGCAGCCTATAGTGATGGGGTGTACGAGGTAATTCAGGCAGATAAGGCAAGTGAGTTCTTTCTGGAAGGCTTGTGGGAAGTCTAAGTCCATTTTTCTGAGGGAAGAAAACCAGAA------------GAATTTATTATTATGCTGTAGAGAGACAAAGATCTAAGCAAAGTTTGAATCAGATTTTGATTCAAAATCAAAATTTTGATTACTACTGATAAGCTTACAGGTTTAAATCTAGAGCAGGATAGGATTTTATTTTGCACATAACAAAAATGAAAAACTGCGGCACAAAAAAA--TTCAAGCTTTGCAGAAAAATGTGTTGGTTCCCTAACCAACACACACATAC--------CTACTTTCCTGAATTCTTTCCTCCTATATGAAAAAA----CTT----AAgactggacacagtagctcatgcttgtaat-tcagcactttggtaggctgaggcagcaggattgcttgacccaaggagttcaagaccaggctgggcaacacgatgagaccctgtctct----ac----------aaaaaaaaaa-aatagctaag----------catgcctatagt----gtcactagggaggctgaggtgggaggatcgcttgagcccaggaggtcaagatggcagtgagccatgatccagccactacactctagcctgagtgacagagcaagactctgtctcaaaaaaGAGgaaagaaagaaa i chlSab2.chr1 C 0 I 1045 s colAng1.NW_012116622v1 190557 788 + 3898586 CACTAGA-TTCTTCAGAAGAATATTGGTTTTGAAATCTTCCTGCTGTGACGGTTCCTT----------TCA-----TGCAGGGCAGGAGTATGGGCTTCTTCCCAGCAAAGGCAGAGGCAGGGCCTACCGAAGCTGTGCCCGCAGCCTATAGTGATGGGGTCTACGAGGTAATTCAGGCAGATGAGGCAAGTGAGTTCTTTCTGGAAGGCTTGTGGGAAGTCTAAGTCCATTTTTCTGAGGGAAGAAAACCAGAA------------GAAT---TTATTATGCTGTAGAGAGACAAAGATCTAAGCAAAGTTTGCATCAGATTTTGATTCAAAATCAAAATTTTGATTACTACTGATCAGCTCACAGGTTTAAATGTAGAGCAGGATAGGATTTTATTTTGCACATAACAAAAATGAAAAACTGAGGCACAAAAAAA--TTCAAGATTTGCAGAAAAATGTGTTGGTTCCCTAACCAACACACACATAC--------CTACTTTCCCAAATTCTTTCCTCCTGTATGAAAAAA----CTT----CAggctggacacagtagctcatgtttgtaat-ccagcactttgggaggctgaagcagcaggattgcttgacccgaggagttcaagaccaggctgggcaacatgatgagaccctgtctct----acaaaa----aaaaaaaaaaaa-aatagctgag----------catgcctatagt----gccactaggcaggctgaggtgagaggatcgcttgagcccaggaggtcaagatggcagtgagccatgatccagccactacactctagtctgagtgacagagcaagactctgtctcaaaaatgaggaaagaaagaaa i colAng1.NW_012116622v1 C 0 I 386 e ponAbe2.chrUn 2071045 3210 + 72422247 I a score=14146.000000 s hg38.chr14_KI270725v1_random 59322 50 + 172810 agaaaGAGAGAGAgagggagggagggaaggaggaaggaagga---aggaagga s panTro5.chrY 295588 49 + 26350515 agaaagaaagagag-gagagggagggaaggaagaaggaagga---aggaagga i panTro5.chrY C 0 C 0 s panPan2.chr11 88565749 27 + 134183262 agaaagaaaGGAag-----------------------aaaga---gagagaga i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 14317 34 + 57002 agaaaGAGAGAGAg----------------agggagggaagg---aggaagga i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 28614 53 + 112108 aaaacgagagagagagagagagaaggaaagagagagaaaaaagataagaaaga i nomLeu3.chrUn_GL397743_2 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e colAng1.NW_012116622v1 191345 386 + 3898586 I e chlSab2.chr1 81225482 1045 + 126035930 I a score=37727.000000 s hg38.chr14_KI270725v1_random 59372 43 + 172810 aggaaggaaggaaggaaggaaggaag--aaaaggaaggaaggaag s panTro5.chrY 295637 31 + 26350515 aggaaggaagggag--------------aaaaggaaggaaggaag i panTro5.chrY C 0 C 0 s panPan2.chr11 88565776 30 + 134183262 gagaaggaaggaag---------------aaaagaaggaaggaag i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 14351 31 + 57002 aggaaggaaggaag--------------aaaaggaaggaaggaag i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 28667 45 + 112108 aagaaagaaagaaaaaagaaggaaagaaagaagaaagaaagaaag i nomLeu3.chrUn_GL397743_2 C 0 I 2330 s chlSab2.chr1 81226527 42 + 126035930 agggaggaaagaaagaaggaaggaa---ggaaggaaagaaggaag i chlSab2.chr1 I 1045 C 0 s colAng1.NW_012116622v1 191731 42 + 3898586 agggaggaaagaaagaaggaaggaa---ggaaggaaagaaggaag i colAng1.NW_012116622v1 I 386 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I a score=373571.000000 s hg38.chr14_KI270725v1_random 59415 290 + 172810 TTTACAGAGTTTTT-TGAGGTGTTAGTGTTCCCTAAATTGTATGGTCTTCAGAGGTTT-ACTCTCCTATAGCTTCAAGGGGTGAGTCCTGACTGGTAGGAAAATCAATCACACTCTTACTTGCCAGTGATTCATTTAGGGAAGACAGCTAACTAAGCTCTTCCATTTTGATTATTTCATTTAATTG-TAACAACCATCTTATCATGACTTCTTCAAAATTACCCGGCCAGTAAGTGCTGgaggactccccagaagcagaaaccaccatgcttccagtatagcctacggaacca s panTro5.chrY 295668 291 + 26350515 TTTACAGAGTTTTTCTGAGGTGTTAGTGTTCCCTAAATTGCATGGTCTTCAGAGGTTT-ACCCTCCTATAGCTTCAAGGGTTGAGTCCGGACTGGTAGGAAAATCAATCACACTCTTACTTGCCAGTGATTCATTTAGGGAAGACAGCTAACTGAGCTCTTCCAATTTGATTATTTTATTTAATTG-TAGCAACCATCTTATCATGACTTCTTCAAAATTACCCTGCCAgtaagtgttggaggactccccagaagcagaaaccaccatgcttcctgtatagcctacggaacca i panTro5.chrY C 0 C 0 s panPan2.chr11 88565806 291 + 134183262 TTTACAGAGTTTTT-TGAGGTGTTAGTGTTCCCTAAATTTTATGGTCTTCAGAGGTTC-ACCCTCCTATAGCTTCAAGGGGTGAGTCCTGACTGATAGGAAAATCAGTCACACTCTTACTTGCCAGTGATTCATTTAGGGAAGACAGCTAACTAAGCTCTTCCACTTTGATTATTTCATTTAATTGTTAACAACCATCTTATCATGACTTCTTCAAAATTACCCTGCCAGTAAGTGTTGgaggcctccccagaagcagaaaccaccatgcttcctgtatagcctatggaacca i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 14382 290 + 57002 TTTACAGAGTTTTT-TGAGGTGTTAGTGTTCCCTAAATTGTATGGTCATCAGAGGTTT-AccctcctatagcttcaagggttgagtcctgactggtaggaaaatcaatcacactcttacttgccagtgattcatttaggGAAGacagctaactaagctcttccactttgattatttcatttaattg-taacaaccaccttatTATGACTTCTTCAAAATTACCCTGCCAGTAAGTGTTGgaggactccccagaagcagaaaccaccatgcttcctgtatagcctatggaacca i gorGor5.CYUI01002012v1 C 0 C 0 s chlSab2.chr1 81226569 290 + 126035930 CTTACAGAGTTTTT-TGAGGCGTTAGTGTTCCCTAAATTGTat-gtcttcagaggtttgaccctcctatagcttcaagggatgagtcctgactggtgggaaaatcaatcacactcttacttgccagcgattcatttaggGAAGACAGCTAACTAAGCTCTTCCACTTTGATTATTTCATTTAACTG-TAACAACCATCTTATTATGACTTCTTCAAAATCACCCTGCCAGTAAGTGTTGgaggcctccccagaagcagaaaccaccatgcttcctgcatagcctacagaacca i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 191773 291 + 3898586 CTTACAGAGTTTTT-TGAGGCGTTAGTGTTCCCTAAATTGTATGGTcttcagaggtttgaccctcttatagcttcaagggatgagtcctgactggtgagaaaatcagtcacactcttacttgccagcgattcatttaggGAAGACAGCTAACTAAGCTCTTCCACTTTGATTATTTCATTTAACTG-TAACAACCATCTTATCATGACTTCTTCAAAAtcaccctgccagtaagtgttggaggcctccccagaagcagaaaccaccatgcttcctgtatagcctacggaacca i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=809262.000000 s hg38.chr14_KI270725v1_random 59705 1003 + 172810 ttagccaactaaaggtgtttctcaggtatttctttataTCTTCAGCCAAAATTAAAGAGTTAGGCTTTACTCTCCAAGATACTGCAACAGACAAAAACAAGGCACCACTGTTTTCTAATGTTGTTTTCTTGttaattcaatcaacaagtattttctggtaagtttactgttccagagactgttaacctggtgatgcaccggttaataaaacaTCCTTAAGAGAAATAAAAGTTTAAAAATAAACCAGATGATAAAATGCAGTAGTGTACACAATGCCACTTATCCGCA-------------TGTCTTCTCTCTGTCACCCATGATCCAGAAAATTTCTTTAGTATAAGCCATTGATAAAGATGCCTGAAAAATTCATGTATAGAAGACATAGTCACAAAATTATTTTTTTCCTTTGATATCCCTTGTTACCTCAAACAGAATTTACCACTCCAATTCGATTTCTGAATACATGGGAGTTAATAGAGTACTCCTAATCCATTTATAGGATCTACACTAAGTAAAAAAA-TTAAAGACATCTGAAAACTATTTTGTAAGTCCTTATAATCCATATCAACAATTATGGAATATATTAAGTAATAGACCAAAAATTAATCATCATATTAACCAAAAACACATAGCAAGACAAGATAACTAAATATTTTCATTTGGAAATTGGGAAATTTAGTCAATTTTAAAACTCAGCAAATGAGATCATTTCACAGAAGCAACCTAGGTTTGCTGGTAAATTAAAATTATGACA-TTTTGTTTTGGTTTGGGAGGGTAGTTCCTCTTCTGTAAATTGTGTACTCACATAAGAAATATATCTATGTTCTCACAGACACTTGCTGTAGAGGTAATAATATGAAGTTAGCTCAGGGATCAGGGCCTCACAGTGCAGTGCTGGTAGttttttttttttttttttttttttttt----------gccctgcaccttgagtaaaagtttcctgaggcctccccggaagcagaaaccactatgcttcctgtatagcctatggaacgg s panTro5.chrY 295959 1011 + 26350515 tgagccaactaaaggtgtttctcaagtatttctttataTCTTTGGCCAAATGTAAAGAGTTAGGCTTTATTCTCCAAAATACTGAAACAGACAAAAACAAGCCACCACTGTTTTCTAATGTTGTTTTCTTGTTAATTCAATCAACAAGTATTTTCTGGTAAGTTTAGTGTTCCAGAGACTGTTAACCTGGTGATGCACCGGTTAATAAAACATCCTTAAGAGAAATAAAAGTTTAAAAATAAACCAGATGATAAAATGCAGTAGTGGACACAATGCCACTTATCCACA-------------TGTCTTCTGTCTGTCACCCATGATCCAGAAAATGTCTTTAGTATAAGCCACTGATAAAGATGCCTGAAAAATTTTCGTATAGAAGACATAGTCACAAAATTATTTTTTTCCTTTTATATCCCTTGTTACCTCAAACAGAATTTACCACTCCAATTCGATTTCTGAATACATGGGAGTTAATAGAATACTCCTAATCCATTTATAGGATCTACACCAAGTAAAAAAAATTAAAGAGATCTGAAAACTATTTTGTGAGTCCTTATAATCCATATCAACAATCATGGAATATATTAAGTGATAGACCAAAAATTAATCATCATATTAAGCAAAAACACAAAGCAAGACAAGATAACTAAATATTTTCATTTGGAAATTGGGAAATTTAGTCAGTTTTAAAACTCAACAAATGAGATCATTTAACAGAAGCAACCTAGGTTTGCTGGTAAATTAAAATTATGACA-TTTTGTTTTGGTTTTGGAGGGTAGTTC---TTCTGTAAATTGTGTACTCACAAAAGAAATATATCTATGTTCTCACAGACACTTGCTGTAGAGGTAATAATATGAAGTTAGCTCAGGGATCAGGGCCTCACAGTGCAGGGCTGGAAGtttttttttttttttttttttttttttttttttttttgccctgcaccttgagtaaaagttttctgaggcctcaccggaagcagaaaccaccatgcttcttgtatagcctatggaatca i panTro5.chrY C 0 C 0 s panPan2.chr11 88566097 988 + 134183262 tgagccaactaaaGGTAGTTCTCAGTTATTTCTTAATATCTTTGGCCAAAATTAAAGAGTTAGGCTTTACTCTCCAAGATACTGCAACAGACAAAAACAAGCCACCACTGTTTTCTAATGTTGTTTTCTTGCTAattcaatcaacaagtattttctggtaagtttagtgttccagagactgttaacctggtgatgtactggttaacaaaacaTCCTCAAGAGAATTAAATATTTAAAAATAAACAAGATGATAAAATGCAGTAGTGTACACAATGCCACTTAACCACA-------------TGTCTTCTGTCTATCACCCATGATCCAGAAAATGTCTTTAGTATAAGCCATTGGTAAAGATGCATGAAAAATTTACATATAGAAGACATAGTCACAAAATAATTTTTTTCCTTTGATATCCCTTGTTACCTCAAATAGAATTTACCACTCCAATTCGATTTCTGAATACATGGGAGTTAATAGAATACTCCTAATCCATTTATAGGATCTACACTAAGTAAAAAAA-TTAAAGACATCTGAAAACTACTTTGTGAGTCCTTATACTCCATATCAATAGTCATGGAATATATTAAGTAATAGGCCAAAAATTAATCATCATATGAACCAAAAACACATAGCAAGACAAGGTAACTAAATATTTTCATTTGGAAATTGGGAAATTTAGTCAATTTTAAAACTCAGCAAATGAGATCATTTCACAGAAGCAACCTAGGTTTGCTGGTAAATTATAATTAGGACATTTTTGTTTTGGTTTGGGAGGGTAGTTCCTCTTCTGTAAATTGTGTACTCACTTAAGAAATATATCTATGTTCTCACCGACGCTTGCTGTAGAGGTAATACTATGAAGTTAGCTCAGGGATCAGGACTCCACATTACGGTGCTGGTAGCTTTTTTTttt--------------------------gccctgcaccttgagtaaaagtttcctgaggcctccccagaagcagaaaccaccatgcttcctgtataccctatggaacca i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 14672 1005 + 57002 tgagccaactaaaggtgtttctcaggtatttctttataTCTTTGGCCAAAATTAAAGAGTTAGGCTTTACTCTCCAAGATACTGCAACAGACAAAAACAAGCCACCACTGTTTTCTAATGTTGTTTTCTTGTTAATTCAATCAACAAGTATTTTCTGGTAAGTTTAGTGTTCCAGAGACTGTTAACCTGGTGATGCACCGGTTAATAAAACATCCTTAAGAGAAATAAAAGTTTAAAAATAAACCAGATGATAAAATGCAGTAGTGTACACAATGCCACTTATCCGCA-------------TGTCTTCTGTGTGTCACCCATGATCCAGAAAATGTCTTTAGTATAAGCCATTGATAAAGATGCCTGAAAAATTTACGTATAGAAGACATAGTCACAAAATTATTTTTTTCCTTTGATATCCCTTGTTACTTCAAACAGAATTTACCACTCCAATTCGATTTCTGAATACATGGGAGTTAATAGAATACTCCTAATCCATTTATAGGATCTACACTAGGTAAAAAAA-TTAAAGACATCTGAAAACTATTTTGTGAGTCCTTATAATCCATATCAACAATCATGGAATATATTAAGTAATAGACCAAAAATTAATCATCATATTAACCAAAAACACATAGCAAGACAAGATAACTAAATATTTTCATTTGGAAATTGGGAAATTTAGTCAATTTTAAAACTCAGCAAATGAGATCATTTCACAGAAGCAACCTAGGTTTGCTGGTAAATTAAAATTATGACA-TTTTGTTTTGGTTTGGGAGGGTAGTTCCTCTTCTGTAAATTGTGTACTCACATAAGAAATATATCTATGTTCTCACGGACACTTGCTGTAGAGGTAATAATATGAAGTTAGCTCAGGGATCAGGGCCTCACAGT-CAGTGCTGGTAGCtttttttttttttttttttttttttttttt------gccctgcaccttgagtaaaagtttcctgaggcctccccggaagcagaaaccac-atgcttcctgtatagcctatggaaccg i gorGor5.CYUI01002012v1 C 0 C 0 s chlSab2.chr1 81226859 987 + 126035930 tgagccaactaaaGGTATTTCTCAGGTATTTCCTTATATCTCTGGCCAAAATC--AGAGTTAGGCTTTACTCTCCAAGATACTGCAACAGACAAAAACAAGCCACCATTGTTTTCTAACGTTGTTTTCTTGTTAATTCAATCAACAAGTATTTTCTGGTAAGTTTAGTGTTCCAGAGACTGT--------------ACTGGTTAATGAAACATCCTTAAGAGAAATAAAAGTTTAAAAATAAACCAGATGATAAAATGCAGTAGTGTACGCAATGCCACTTATCCACATTTTAGAGTCTTCTGTCTTCTGTCTGTCA-CCATGATCCAGAAAATGTCTTCAGTATAAGCCATTGGTAAAGATGCATGAAAAATGTATGTAGAGAAGATATAGTCATACAATTTTTTTTTTCCTTTGAAATCCCTTGTTACCTCAAACAGAATTTACCACTGCAACTCGATTTCTGAATACGTGGGAGTTAATAGAATACTCCTAATCCATTTATAGGATCTACACTTAGTAAAAAA--TTAAAAATATCTGAAAACTACTTTGTGAGTCCTTATAATCCATATCAATAATCATGGATTATATTAAGTAATAGACC-AAAATTAATCATCATATTAACCAAAAACACATAGCAAGAAAAGATAACTAAATATTTTCATTTGGAAATTGGGAAATCTAGTCAATTTTAAAACTCAGCAAATGAGATCATTTCACAGAAGTAACCTAGGTTTTCTGGTAAATTAAAATCAGGACA-TTTTGTTTTGGTTTGGGAGGGTAGTTCCTCTTCTGTAAATTGTGTACTCGCTTAAGAAACATATATATGCTCTCACCGACGCTTGCTGTAGAGGTAATAATATGAAGTTAGCTCAGGGATCAGGGCCTCAGAGTGCAGGGCTGGTAGCTTTTTTTTTTTTTttt--------------------gcccggcaccttgagtaaaactttcctgagggctccccagaagcagaaaccaccatgctttctgtatagcctacggaacca i chlSab2.chr1 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e colAng1.NW_012116622v1 192064 0 + 3898586 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=10403.000000 s hg38.chr14_KI270725v1_random 60708 8 + 172810 tgagccaa s panTro5.chrY 296970 8 + 26350515 tgagccaa i panTro5.chrY C 0 C 0 s panPan2.chr11 88567085 8 + 134183262 tgagccaa i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 15677 8 + 57002 tgagccaa i gorGor5.CYUI01002012v1 C 0 C 0 s chlSab2.chr1 81227846 8 + 126035930 tgagtcaa i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 192064 8 + 3898586 tgagtcaa i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=320988.000000 s hg38.chr14_KI270725v1_random 60716 182 + 172810 ctaaaggtatttctcatgtatttctttgtagcaatgcaagaacgtactaatacaGCTAAGCAGAGGCTATCAGGACCAGCAACAGTCTGAGCTGGATGAGAGACAAAGCTAAACTTAGAGCAGCAGCAGGAGCTGCCAGGGA-GACAGAAAGGAAGGACAGACTCCTAAATTCCAGGATGTCT s panTro5.chrY 296978 181 + 26350515 ctaaag-tatttctcatgtattactttatagcaatgcaagaatgcactaatacaGCTAAGCAGAGGCTATCAGGACCAGCAACAGTCTGAGCTGGATGAGAGACAAAGCTAAACTTTGAGTAGCAGCAGGAGCTGCCAGGGA-GACAGAAAGGAAGGACGGACTCCTAAATTCCAGGATGTCT i panTro5.chrY C 0 C 0 s panPan2.chr11 88567093 182 + 134183262 ctaaaggtatttctcatgtatttctttatagaaatgcaagaacatactaatacaGCTAAGCAGAGGCCATCAGGACCAGCAACAGTCTGAGCTGGATGAGAGACAAAGCTAAACTTTGAGAAGCAGCAGGAGCTGCCAGGGA-GACAGAAAGGAAGGGCGGAGTCCTAAATTCCAGGATGTCT i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 15685 183 + 57002 ctaaaggtatttctcatgtatttctttatagcaatgcaagaacgtactaatacaGCTAAGCAGAGGCCATCAGGACCAGCAACAGTCTGAGCTGGATGAGAGACAAAGCTAAACTTTGAGCAGCAGCAGGAGCTGCCAGGGATTACAGAAAGGAAGGACGGACTCCTAAATTCCAGGATGTCT i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 251827 182 - 11451906 ctAAAGGTATTtctcaggtatttctttatagcaatgcaagaacatactcatacaGCTAGGCAGAGGCCATCAGGACCAGCAACAGTCTGAGCTGGGTGAGAGATAAAGCTAAACTTTGAGCTGCAGCAGGAGCTGCCAGGGA-GACAGAAAGGAAGGAAGGAGCCCTACATTCCAGGATGTCT i macNem1.NW_012010789v1 N 0 C 0 s chlSab2.chr1 81227854 182 + 126035930 ctaaaggtatttctcaggtatttctttatagcaatgcaagaacatactaacacaGCTAGGCAGAGGCCATCAGGACCAGCAGCAGTCTGAGCTGGGTGAGAGATAAAGCTAAACTTTGAGCAGCAGCAGGAGCTGCCAGGGA-GACAGAAAGGAAGGAAGGAGCCCTAAATTCCAGGATGTCT i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 192072 182 + 3898586 ctaaaggtatttctcaggtatttctttatagcaatgcaagaacatactaatacaGCTGGGCAGAGGCCATCAGGACCAGCAACAGTCTGAGCTGGGTGAGAGATACAGCTAAACTTTGAGCAGCAGCAGGAGCTGCCAAGGA-GACAGAAAGGAAGGAAGGAGCCCTAAATTGCAGGATGTCT i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=1522250.000000 s hg38.chr14_KI270725v1_random 60898 661 + 172810 CCTTTAAGTCTGTAAGAAGCTCAGCCACCGTCTCCTTACCTGACTCCTCTGGGAAAGAGTTTCCCTAGGTTAAGCCATACAGGGATAGGGTAGGAGATGCCATTTGGATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCTTTGAGAAGGAGACACAGTGGAGTAGGTGTGTAGGTTCACAGGGCCAGCTATGGGTAGAGTCGGGTGTACATTTTTAGAAGCCACAATTCCCCAAAATCTCCTGACTATAACATCAGTGCACAGAGCCAGTGAAATGGAGGAGGAGTGGGTTCAGGCAATTCAGGAAGAAGGAAAGTAACAAATGAGTGGTTGCAGGAGGACACTTTTTCTGTCGAGGTCACTAAACAAAACATTGTCTCCTCCCCTTAACTTCGGAAACAAGCAATGGAGGGTAAAAGTGTTGCCTGGGCCCTGGGGGCAAAGGCAGTAGATAACTTCTCTGTCGCGTTCTCCAGAAGGGCCCATTCCAGCCTCACAGGCTGAGAAGTCTGTTCGGTTCCCAAGTACTAGAGATGCTGCTATAAGGGACTCCCGAATTTCCTTCCTGAACCAGAGGCTGCCCAGCCTTTTCTTCCTGTTTTATTTTTTCCCAGGAAGATACTTGCCTGTACAATTACAAGGTTCTACGGtt s panTro5.chrY 297159 641 + 26350515 CCTTTAAGTCTGTAAGAAACTCAGCCACCGTCTCCTTACCTGACTCTTCTGGGAAAGAGTTTCCTTAGGTTAAGCCATACAGGGATAGGGTAGGAGATGCCATTTGCATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCTATGAGAAGGAGACACAGTGGAACAGGTGT--------------------ATGGGTAGAGTCCGGTGTACATTTTTAGAAGCCACAATTCCCAAAAATCTCCTGACTATAACATCAGTGCACAGAGCCAGTCAAATGGAGGAGGAGTGGGTCCAGGCAATTCAGGAAGAAGGAAAGTAACAAATGAGTGGTTGCAGGAGGACACTTTTTCTGTCGAGGTCACTAAACAAAACATTGTCTCCTCACCTTAACTTCGGAAACAAGCAATGGAGGATAAAAGTGTTGCCTGGGCCCTGGGGGCAAAGGCAGTAGATAACTTCTCTGTCGTGTTCTCCAGAAGGGCCCATTCCAGCCTCACAGGCCGAGAAGTCTGTTCGGTTCCCAAGTACTAGAGATGCTGCTATAAGGGACTCCCGAATTTCCTTCCTGAACCAGAGGCTGCCCAGCCTTTTCTTCCTGTTTTATTTTTTCCGAGGAAGAAACTTGCCTGTACAATTACAAGGTTCTACGGtt i panTro5.chrY C 0 C 0 s panPan2.chr11 88567275 661 + 134183262 CCTTTAAACCTGTAAGCAGCTCAGCCACTGTCTCTTTACCTGATTCCTCTGGGAAAGAGTTTCCCTAGGTTAAGCCATACAGGGATAGGGCAGGAGATGCCATTTGGATCTAGGAGCAGAGGTCAGAGACTCAGCAGGAAGAGTGTCTCTATGAGAAGCAGACACAGTGGAGCAGGTGCGTAGGTTCACAGGGCCAGCTATGGGTAGAGTCGGGTGTACATTTTTAGAAGCCACAATTCCCAAAAATCTCCTGACTATAACATCAGTGCACAGAGCCAGTCAGATGGAGGAGGAGTGGGTCCAGGCAATTCAGGAAGAAGTAAAGTAAAAAATGAGTGGTTGCAGGAGAACCCTTTCTCTGTCGAGGTCACTAGACAGAACACTGTAGCCTCCCCTTAACTTCAGAAACAAGCAATGGAGGGTAAAAGTGTTGCCTGGGCCCTGGGAGCAAAGGCAGTAGATAACTTCTCTGTTGTGTCCTCCAGAAGGGCCCAGTCCAGCCTCACAGGCCGAGAAGTCTGTTCAGTTCCCAAGTACTAGAGATGCTGCTATAAGGGATCCCTGAATTTCCTGCCCGAACCACAGGCTCCCCAGCCTTTTCTTCCTGTTTTATTTTTTCCCAGGAAGAAACTTGCCTGTATAATTACAAGGTTCTATGatt i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 15868 656 + 57002 CCTTTAAGTCTGTAAGAAGCTCAGCCACCGTCTCCTTACCTGACTCCTCTGGGAAAGAGTTTCCCTAGGTTAAGCCATACAGGGATAGGGTAGGAGATGCCATTTGGATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCT-TGAGAAGGAGACACAGTGGAGCAGGTGTGTAGGTTCACAGGGCCAGCTATGGGTAGAGTCGGGTGTACATTTTTAGAAGCCACAATTCCCAAAAATCTCCTGACTATAACATCAGTGCACAGAGCCAGTCAAATGGAGGAGGAGTGGGTCCAGGCAATTCAGGAAGAAGGAAAGTAACAAATGAGTGGTTGCAGGAGGACACTTTTTCTGTCGAGGTCACTAAACAAAACATTGTCTCCTCCCCTTAACTTCAGAAA----CAATGGAGGGTAAAAGTGTTGCCTGGGCCCTGGGGGCAAAGGCAGTAGATAACTTCTCTGTCGTGTTCTCCAGAAGGGCCCATTCCAGCCTCACAGGCCGAGAAGTCTGTTCGGTTCCCAAGTACTAGAGATGCTGCTATAAGGGACTCCCGAATTTCCTTCCTGAACCAGAGGCTGCCCAGCCTTTTCTTCCTGTTTTATTTTTTCCCAGGAAGAAACTTGCCTGTACAATTACAAGGTTCTACGGtt i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 252009 661 - 11451906 CCTTTAAATCTTTAAGAAGCTCAGCCACCATCTCTTTACCTGACTCCTCTGGGAAGGAGTTTCCCTAGGTTAAGCCATACAGCAATAGGGCAGGAAGTGCCATTTGGATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCTATGAAAAGGAGACAGAGTAGAGCAGGTGCATAGGTTCACAGGGTCAGCTATGGATAGAGTCAGGTGTACACTTTCAGAAGCCACAATTCCCAAAAGTCTCCTGACTACAACGTCAGTGCACAGAGCCAGTCAAATGGAGGAGGAGTGGGTCCAGGCAATTCAGGCAGAAGGAAAGTAACAGATGAGTGGTTGCAGGAGCACACTGTTTCTGTCGAGGTCACTAGACAGAACATTGTCTCCACCTCTTAGCTTCGGAAGCAAGCAATGGAGGGTAAAAGTGTTGCCTGGGTTCTGGGGGCAAAGGCAGTAGATAACTTCTCTGTCATGTCCTCCAGAAGGGCCCGGTTCAGCCTCACAGGCCGAGAAGTCTGTTTGGTTCCCAAGTACTAGAGATGCTGCTATAAGGGACCCCCGAATTTCCTGCCTGAACCAGAGGCTGCCCAGGCTTTTCTTCCTGTTTTATATTTCCCCAGGAAGAACCTTGCCTGTATAATTACAAGGTTCTACGatt i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81228036 658 + 126035930 CCTTTAAATCTTTAAGAAGCTCAGCCACCATCTCTTTACCTGACTCCTCTGGGAAAGAGTTTCCCTAGGTTAAGCCATACAGCGATAGGGCAGGAGGTGCCATTTGGATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCTATGAAAAGGAGACAGAGTAGAGCAGGTGCATAGGTTCACAGGGTCAGCTATGGGTAGAGTCAGGTGTACACTTTCAGAAGCCAGAATTCCCAAAAGT---CTGACTACAACATCAGTGCACAGAGCCAGTCAAATGGAGGAGGAGTGGGTCCAGGCAATTCAGGCAGAAGGAAAGTAACAGATGAGTGGTTGCAGGAGGACACTTTTTCTGTCGAGGTCACTAGACAGAACATTGTCTCCACCTCTTAACTTTGGAAGCAAGCAATGGAGGGTAAAAGTGTTGCCTGGGTCCTGGGGGCAAAGGCAGTAGATAACTTCTCTGTCATGTCCTCCAGAAGGGCCCGGTTCAGCCTCACAGGCCGAGAAGTCTGTTTGGTTCCCAAGTACTAGAGATGCTGCTATAAGGGACCCCCGAATTTCCTGCCTGAACCAGAGGCTGCCCAGCCTTTTCTTCCTGTTTTATATTTCCCCAGGAAGAACCCTGCCTGTACAATTACAAGGTTCTACGatt i chlSab2.chr1 C 0 I 212 s nasLar1.chrUn_JMHX01247963v1 0 661 + 1349 CCTTTAAATCTTTAAGAAGCTCAGCCACCATCTCTTTACCTGACTCCTCTGGGAAGGAGTTTCCCTAGGTTAAGCCATACAGCCATAGGACAGGAGATGCCATTTGGATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCTATGAAAAGGAGACAGATTGGAGCAGGTGCATAGGTTCACATGGTCAGCTATGGGTAGAGTCGGGTGTACACTCTCAGAAGCTACAATTCCCAAAAGTCTCCTGACTACAACATCAGTGCACAGAGCCAGTGAAATGGAGGAGGAGTGGGTCCAGGCAATTCAGGAAGAAGGAAAGTAACAGATGAGTGGTTGCAGGAGGACACTTTTTCTGTCGAGGTCACTAGACAGAACATTGTCTCCACCTCTTAACTTCAGAAGCAAGCAATGGAGGGTGAAAGTGTTGTCCGGGTCCTGGGGGCAAAGGCAGTAGATAACTTCTCTGTCATGTCCTCCACAAGGGCCCGGTTCAGCCTCACAGGCCGAGAAGTCTGTTTGGTTCCCAAGTACTAGAGATGCTGCTGTAAGGGACCCCCGAATTTCCTGCCTGAACCAGAGACTGCCCAGCCTTTTCTTCCTGTTTTATATTTTCCCAGGAAGAACCTTGCCTGCACAATTACAAGGTTCTACGact i nasLar1.chrUn_JMHX01247963v1 N 0 C 0 s colAng1.NW_012116622v1 192254 634 + 3898586 CCTTTAAATCTTTAAGAAGCTCAGCCACCATCTCTTTACCTGACTCCTCTGGGAAGGAGTTTCCCTAGGTTAAGCCATGCAGCGACAGGGCAGGAGATGTCATTTGGATCTAGGAGCAGAGGGCAGAGACTCAGCAGGAAGAGTGTCTCTATGAAAAGGAGACAGAGTGGAGCAGGTGCATAGGTTCACAGGGTCAGCCATGGGTAAAGTCGGGTGTACACTTTCAGAAGCCACAATTCCCAAAAGTCTCCTGACTACAACATCAGTGCACAGAGCTACTCAAATGGAGGAGGAGTGG--------------------------GTAACAGATGAGTGGTTGCAGGAGGACACTTTTTCTGTCGAGGTCACTAGACACAACATTGTCTCCACCTCTTAACTTCGGAAGCAAGCAACGGAGGGTAAAAGTGTTGCCTGGGTCCTGGGGGCAAAGGCAGTAGATAGCTTCCCTGTCATGTCCTCCAGAA-AGCCCGGTTCAGCCTCACAGGTCGAGAAGCCTGTTTGGTTCCCAAGTACTAGAGATGCTGCTATAAGGGACCCCCGAATTTCCTGCCTGAACCAGAGGCTGCCCAGCCTTTTCTTCCTGTTTTATATTTCCCCAGGAAGAACCTTGCCTGTACAATTACAAGGTTCTACGatt i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=369529.000000 s hg38.chr14_KI270725v1_random 61559 176 + 172810 ctaaattccaatctagtcttccacatcattttgaaggtataatattatttgtcaaagtggg-----atgatagaacataAGT----GTGGACATAAAATTAAATTGTTGACAAGGAAAAAAACTAAAATAAGaaaataagagagaaaaaatatatgtatgtacagtggttagctagaaatatgcc s panTro5.chrY 297800 169 + 26350515 ccaaattcaaatctagtcttccacatcattttgaaggtataatattacttgtcaaagtggg-----atgatagaaaatatGT----GTAGACATAAA------TTGTTGACAAGGAAAAAA-CTAAAATAAGaaaataagagagaaaaaatgtatgtctatacagtggttagctagaaatatgcc i panTro5.chrY C 0 C 0 s panPan2.chr11 88567936 171 + 134183262 ctaaattccaacctagccttccacatcattttgaaggtataatattatttgtcaaagtggg-----atgatagaagatatGT----GTGCACATAAAATTAAATTGTTGACAAGGaaaaaaactaaaataaaaaa--aagagagaaaaa---TATGTATGTacagtggttagctagaaatatgcc i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 16524 169 + 57002 ctaaattccaatctagtcttccacatcattttgaaggtataatattacttgtcaaagtggg-----atgatagaagatatGT----GTGGACATAAA------TTGTTGACAAGGAAAAAA-ATAAAATAAGaaaataagagagaaaaaatatatgtatgtacagtggttagctagaaatatgcc i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 252670 174 - 11451906 ctaaattccaacctagccttccacatcattttgaaggtgtaatattatttgtcaaagtgcg-----atgatacaagatatGT----GGGGACataaaattaaattgttgacaaggaaaaaaactaaaataaaaaa--aagagagaaaaaaTATATGTATGTacagtggtcagctagaaatatgcc i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81228906 176 + 126035930 ctaaattccaacctagccttccacatcattttgaaggtgtaatattatttgtcaaagtggg-----atgatagaagatatGT----GTGGACATAAAATTAAATTGTTGACAAGGAAAAAAACTAAAATAAAaaagtaagagagaaaaaatatatgtatgtacagtgatcagctagaaatatgcc i chlSab2.chr1 I 212 C 0 s nasLar1.chrUn_JMHX01247963v1 661 178 + 1349 ctaaattccaacctagccttccacatcattttgaaggtgtactattatttgtcaaagtggg-----atgatagaagatatGTGTGGGTGGACGTAAAATTAAATTGCTGACAAGGAAAAAAAATAAAATAaaaga--aagagagaaaaaatatatgtatgtacagtggtcagctagaaatatgcc i nasLar1.chrUn_JMHX01247963v1 C 0 C 0 s colAng1.NW_012116622v1 192888 177 + 3898586 ctaaattccaacgtatccttccacatcattttgaaggtgtactattatttgtcagagtgggaTGGAATGATAGAAGATGTGT----GTGGACATAAAATTAAATTGTTGACAAGGAAAAAAACTAAAATAAA--A--AAGAGAGAAAAAATATATGTATGTacagtggtcagctagaaatatgac i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2071045 3210 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=1577.000000 s hg38.chr14_KI270725v1_random 61735 1 + 172810 c s panTro5.chrY 297969 1 + 26350515 t i panTro5.chrY C 0 C 0 s panPan2.chr11 88568107 1 + 134183262 t i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 16693 1 + 57002 t i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2074255 1 + 72422247 c i ponAbe2.chrUn I 3210 I 666 s macNem1.NW_012010789v1 252844 1 - 11451906 t i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81229082 1 + 126035930 t i chlSab2.chr1 C 0 C 0 s nasLar1.chrUn_JMHX01247963v1 839 1 + 1349 t i nasLar1.chrUn_JMHX01247963v1 C 0 C 0 s colAng1.NW_012116622v1 193065 1 + 3898586 t i colAng1.NW_012116622v1 C 0 C 0 e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=674208.000000 s hg38.chr14_KI270725v1_random 61736 281 + 172810 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcactagcttcccaaatattaaaggATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAGGTTAACAGTTAAAATAACCAGAGTGGCACAGGTACCAGTCATTAAGTGAAACCTTTCATCTTCCCAGAATAGTACCTGTTCCCAAGCCAGCTTCGTTGAAAATCACTTTTCTCTCCTTTACTATTTAGTTTACAGATTGTATAGTAACAATACAGAAACCACAATAGTAGCAAAAA--GA s panTro5.chrY 297970 279 + 26350515 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcaccagcttcccaaatattaaaggATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAAGTTAACAGTTAAAATAACCAGAGTGGCACAGGTACCAGTCATTAAGTGAAACCTTTCATCTTCCCAGAATAGTACCTGTTCCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTACTTTACTATTTAGTTTACAGATTGTATAGTAACAATACAGAAACCACAATAGTAGCAAAAA---- i panTro5.chrY C 0 C 0 s panPan2.chr11 88568108 283 + 134183262 tttaaatatttgacatgtggtatgtgggcctcaatgtgtactattgcactagctactcaaatattaatggATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAGGTTAACAGTCAAAATAACCCGAGTGGCACAGGTACCAGTCATTAAGTGAAACCTTTCATCTTCCCAGTATAGTACCTGTTCCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTCATTTACTATTTAGTTTATAAATTGCATAGTAACAATACAGAAACCACAATAGCAGAAAAAACTAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 16694 281 + 57002 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcactagcttcccaaatattaaaggATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAGGTTAACAGTTAAAATAACCAGAGTGGCACAGGTACCAGTCATTAAGTGAAACCTTTCATCTTCCCAGAATAGTACCTGTTCCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTCCTTTACTATTTAGTTTACAGATTGTATAGTAACAATACAGAAACCACAATAGTAGCAAAAA--AA i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 252845 281 - 11451906 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcactagcttcacaaacattaaaggATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAGGTTAAGAGTCAAAATAACCTGAGTGGAACAGGTACCAGTCATTAAGTGAAACCTTCCATCTTCCCAGAACAATACCTCTTTCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTCTTTTACTATTTAGTTTATAAATTGCATAGTAATAATACAGAAACCACAATAGTAGAGAAAA--AA i macNem1.NW_012010789v1 C 0 I 1 s chlSab2.chr1 81229083 281 + 126035930 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcactagcttcacaaacattaAAAGATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAGGTTAAGAGTCAGAATAACCTGAGTGGCACAGGTACCAGTCATTAAGTGAAACCTTCCATCTTCCCAGAACAGTACCTCTTCCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTCTTTTACTATTTAGTTTATAAATTGCATAGTAACAATACAGAAACCACAATAGTAGAAAAAA--AA i chlSab2.chr1 C 0 I 216 s nasLar1.chrUn_JMHX01247963v1 840 281 + 1349 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcactagcttcacaaacattaaaggATGTCTTTTAAAAGAAAAACCTCTTGCTCAAAGGTTAACAGTCAAAATAACCTGAGCAGCACAGGTACCAGTCATTAAGTGAAACCTTCCATCTTCCCAGAATAGTACCTCTTCCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTCTTTTACTATTTAGTTTATAAATTGCATAGTAACAATACAGAAACCACAATAGTAGAAAAAA--AA i nasLar1.chrUn_JMHX01247963v1 C 0 C 0 s colAng1.NW_012116622v1 193066 280 + 3898586 tttaaatatttggcatgtggtatgtgggcctcaatgtgtactattgcactagcttcacaaacattaaaggATGTCTTTTAAAAGAAAAACCTCTTGCTAAAAGGTTAACAGTCAAAATAACCTGAGTGGCACAGGTACCAGTCATTAAGCGAAACCTTCCATCTTCCCAGAATAGTACCTCTTCCCAAGCCAGCTTCTTTGAAAATCACTTTTCTCTCTTTTACTATTTAGTTTATAAATTGCATAGTAACAATACAGAAACCACAATAGTAGAAAAAA--A- i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2074256 666 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=463631.000000 s hg38.chr14_KI270725v1_random 62017 233 + 172810 T--AAAGAATATTTTTAAATGAAAACTCACATCCTAACTCTAC-CAAAACACGAAAATTAAACCTGAATGCCTCCCATT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGCTCTGGGATTGCATTGTTTTTGGATTGAGTGGAAATTATTGCCTGGTCTTGAAAT-CTTCCATAAtgtgtgtgtgtgtgtgggtgtgtgcgtgtgtgtg----tgtgtgtgtgtatgtgtgt----gtgGTGAATAT s panTro5.chrY 298249 239 + 26350515 ----AAGAATATTTTTAAATGAAAATTCACATCCTAACTCTAC-CAAAACATGAAAATTAAACCTGAATGCCTCCCATT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGCTCTGGGATTGCATTGTTTTTGGATTGAGTGGAAATTATTGCCTGGTCTTGAAAT-CTTCCATAAtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgcatgtgtgtgtgtgtATGTATGTATGCGTGGTGAATAT i panTro5.chrY C 0 C 0 s panPan2.chr11 88568391 229 + 134183262 T--AAAGAATACTTTTAAATGAAAACTCACATCCTAACTCTGC-CAAAACATGATAATTAAATCTGAATGCCTCCCTTT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGCTCTGGGATTGCATTGTCTTTGGATTGAGTGAAAATTATTGCCTGGTCTCTAAAT-CTTCCATtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg----tgtgtgtgtgtgtgtgtgt--------TGAATGT i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 16975 230 + 57002 T--AAAGAATATTTTTAAATGAAAACTCACATCCTAACTCTAC-CAAAACATGAAAATTAAACCTGAATGCCTCCCATT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGCTCTGGGATTGCATTGTTTTTGGATTGAGTGGAAATTATTGCCTGGTCTTGAAAT-CTTCCATAAtgtgtgtg---gtgtgtgcgtgtgtgcgtgtgtg----tgtgtgtatgtatgtatgt----gtgGTGAATAT i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 253127 218 - 11451906 T--AAAGAATATTTTTAAATGAAAACTCACATCCTAACTCTACAAAAAACATGAAAATTAAACCTGAATGCCTCCCTTT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGTTCTTGGATTGCATTGCTTTTGGATTGAGTGGAAATTACTGCCTGGTCTCAAAAT-CTTCCATAATATAtgtg----------tgtgtgtacgtgtgtg----tt------tgtgtgtgtgt----atggtgaatgt i macNem1.NW_012010789v1 I 1 C 0 s chlSab2.chr1 81229580 217 + 126035930 T--AAAGAATATTTTAAAATGAAAACTCACATCCTAACTCTAC-CAAAACATGAAAATTAAACCTGAATGCCTCCCTTT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGTTCATGGATTGCATTGTTTTTGGATTGAGTGGAAATTACTGCCTGGTTTCAAAAT-CTTCCATAATATAtgtg----------tgtgtgtacgtgtgtg----tt------tgtgtgtgtgt----gtggtgAATGT i chlSab2.chr1 I 216 C 0 s nasLar1.chrUn_JMHX01247963v1 1121 228 + 1349 -NNAAAGAATATTTTTAAATGAAAACTCACATCCTAACTCTAC-CAAAACATAAAANTNAAACCTGAATGCCTCCCTTTCCCTGATATATTTTTCTACCTAAATAATTCAGTTCTTGGATTGCATTGTTTTTGGATTGAGAGGAAATTACTGCCTGGTCTCAAAATACCTCCATAATATAtgtg----------tgtgtgtacgtgtgtg----tttgtgtgtgtgtgtgtgt----gtgGTGAATGT i nasLar1.chrUn_JMHX01247963v1 C 0 N 0 s colAng1.NW_012116622v1 193346 220 + 3898586 ---AAAGAATATTTTTAAATGAAAACTCACATCCTAACTCTAC-CAAAACATGAAAATTAAACCTGAATGCCTCCCTTT-CCTGATATATTTTTC-ACCTAAAT-ATTCAGTTCTTGGACTGCATTGTTTTTGGATTGAGAGGAAATTACTGTCTGGTCTCAAAAT-CCTCCATAATATAtgtg----------tgtgtgtacgtgtgtg----tt--tgtgtgtgtgtgtgt----gtgGTGAATGT i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2074256 666 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=174326.000000 s hg38.chr14_KI270725v1_random 62250 108 + 172810 ATTTCTTTTTGTTCAGAGCAAACATTTTTTCAATATGTATATTTAT---------TTTAGGCAGATTATGCTAGTAATTTTCTACAAATGTGCTTTTTAAAAAATAACCTTTAATTT s panTro5.chrY 298488 108 + 26350515 ATTTCTTTTTGTTCAGAGCAGACATTTTTTCAAAATGTATATTTAT---------TTTAGGCAGATTATGCTAGTAATTTTCTACAAATGTGCTTTTTAAAAAATAACCTTTAATTT i panTro5.chrY C 0 C 0 s panPan2.chr11 88568620 116 + 134183262 ATTTCTTTTTGTTCAGAGCAAAC-TTTTTTCAatatgtatatatagatatatatatttaGGCAGATTATGCCAGTAATTTTCTACAAATGTGCTTTTTTAAAAATAATCTTTAATTA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17205 108 + 57002 ATTTCTTTTTGTTCAGAGCAAAGATTTTTTCAATATGTATATTTAT---------TTTAGGCAGATTATGCTAGTAATTTTCTACAAATGTGCTTTTTAAAAAATAACCTTTAATTT i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 253345 106 - 11451906 atttcttcttgtTCAGTGTAAAT-TTTTTTCAATATGTATGTATA----------TTTAGGCAGATTATGCTAGTAATTTTCTACAAATGTGCTTTTTAAAAAATAATCTTTAATTC i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81229797 106 + 126035930 ATTTCTTCTTGTTCAGAGCAAAT-TTTTTTCAATATGTATGTATA----------TTTAGGGAGATTATGCTAGTAATTTTCTACAAATGTGCTTTTTAAAAAATAATCTTTAATTC i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 193566 106 + 3898586 ATTTCTTTTTGTTCAGAGCAAAT-TTTTTTCAATATGTATATATA----------TTTAGGCAGGTTATGCTAGTAATTTTCTACAAATGTGCTTTTTAAAAAATAATCTTTAATTC i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2074256 666 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=2548.000000 s hg38.chr14_KI270725v1_random 62358 1 + 172810 A s panTro5.chrY 298596 1 + 26350515 A i panTro5.chrY C 0 C 0 s panPan2.chr11 88568736 1 + 134183262 A i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17313 1 + 57002 A i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2074922 1 + 72422247 a i ponAbe2.chrUn I 666 I 1355 s macNem1.NW_012010789v1 253451 1 - 11451906 A i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81229903 1 + 126035930 A i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 193672 1 + 3898586 A i colAng1.NW_012116622v1 C 0 C 0 e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=7644.000000 s hg38.chr14_KI270725v1_random 62359 4 + 172810 AAAA s panTro5.chrY 298597 4 + 26350515 AAAA i panTro5.chrY C 0 C 0 s panPan2.chr11 88568737 4 + 134183262 AAAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17314 4 + 57002 AAAA i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 253452 4 - 11451906 AAAA i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81229904 4 + 126035930 AAAA i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 193673 4 + 3898586 AAAA i colAng1.NW_012116622v1 C 0 I 1 e ponAbe2.chrUn 2074923 1355 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=2548.000000 s hg38.chr14_KI270725v1_random 62363 1 + 172810 A s panTro5.chrY 298601 1 + 26350515 A i panTro5.chrY C 0 C 0 s panPan2.chr11 88568741 1 + 134183262 A i panPan2.chr11 C 0 I 5 s gorGor5.CYUI01002012v1 17318 1 + 57002 A i gorGor5.CYUI01002012v1 C 0 I 1 s macNem1.NW_012010789v1 253456 1 - 11451906 A i macNem1.NW_012010789v1 C 0 I 5 s chlSab2.chr1 81229908 1 + 126035930 A i chlSab2.chr1 C 0 I 5 s colAng1.NW_012116622v1 193678 1 + 3898586 A i colAng1.NW_012116622v1 I 1 I 4 s rhiRox1.JABR01191668v1 1048 1 - 1304 A i rhiRox1.JABR01191668v1 N 0 C 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=-1936.000000 s hg38.chr14_KI270725v1_random 62364 1 + 172810 -T s panTro5.chrY 298602 1 + 26350515 -A i panTro5.chrY C 0 C 0 s panPan2.chr11 88568747 1 + 134183262 -A i panPan2.chr11 I 5 C 0 s gorGor5.CYUI01002012v1 17320 1 + 57002 -A i gorGor5.CYUI01002012v1 I 1 C 0 s rhiRox1.JABR01191668v1 1049 1 - 1304 T- i rhiRox1.JABR01191668v1 C 0 N 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e colAng1.NW_012116622v1 193679 4 + 3898586 I e chlSab2.chr1 81229909 5 + 126035930 I e macNem1.NW_012010789v1 253457 5 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=334551.000000 s hg38.chr14_KI270725v1_random 62365 200 + 172810 ATATTCTTACTCAGTGGCCCACAATTGTTAAAAATGCTACTAATGGAgctgggtatggtgacatacacctgtcatcccagctacttgggagactgaggcaggggta-ttgcttaaacttgggaatgtgaaaccagcctgggcaacatagtgagatctcaatctcaaaaaTCAATCAATCATTAAAAA----------ATAAAATAAAACAC s panTro5.chrY 298603 204 + 26350515 TTATTCTTACTCAGTGGACCACAATTGTTAAAAACGCTGCTAATGGAgctgggtatggtgacagacacctgtcatcccagctacttgggagactgaggcagggata-ttgcttaaacttgggaatgtgaaaccagcctgggcaacatagtgagatcccaatctcaaaaaTCCATCAATCATTAAAAA------TAAAATACAAGAAAATAC i panTro5.chrY C 0 C 0 s panPan2.chr11 88568748 211 + 134183262 TTATTCTTATCCAGTGGCCCATAATTTTTAAAAACACTACTAATGGAgctgggtatggagtcacacacctgccatcccagctacttgggagactgaggcaggggtatttgcttgaacctgggaatgtgaaactagcctgggcaacatagtgagacccccatttcaaaaaTCAATCTATCATTTAaaaataaaataaaacaaaacaaaacaC i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17321 205 + 57002 TTATTCTTACTCAGTGGCCCACAATTGTTAAAAACACTACTAATGGAgctgggtatggtgacacacacctgtcatcccagctacttgggagactgaggcaggggta-ttgcttaaacttgggaatgtgaaaccagcctgggcaacatagtgagatcccaatctcaaaaaTCAATCAATCATTAAAAA-----ATAAAATAAAATAAAACAC i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 253462 200 - 11451906 TTAGTCTTACCCAGTGGCCCACAATTGTTAAAAACACTACTAATGGAgctgggtatggtgacatacacctgtcgtcccagctactcgggagactgaggcaagggta-ttgcttgaatctgggaatgtgaaaccatcctgagcaatatagtgagacccccatctcaaaaaCTGATCAATCATTAAAAA----------ATAAAGTAAAACAC i macNem1.NW_012010789v1 I 5 C 0 s chlSab2.chr1 81229914 200 + 126035930 TTATTCTTACCCAGTGGCCCACAATTGTTAAAAACACTACTAATGGAgctgggtatggtgacacacacctgtcatcccagctacttaggagactgaggcaaggata-ttgcttgaatctgggaatgtgaaaccatcctgagcaacatagtgagacccccatctcaaaaaTCGATCAATCTTTAAAAA----------ATAAAGTAAAACAC i chlSab2.chr1 I 5 I 231 s colAng1.NW_012116622v1 193683 200 + 3898586 TTATTCTTACCCAGTGGCCCACAATTGTCAAAAACACTACTAATGGAgctgggtatggtgacacacacctgtcatcccagctacttgggagactgaggcaagggta-ttgcttgaatctgggaatgtgaaaccatcctgagcaacatagtgagacccccatctcaaaaCTCGATCAATCATTAAAAA----------ATAAAGTAAAACAC i colAng1.NW_012116622v1 I 4 C 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=665441.000000 s hg38.chr14_KI270725v1_random 62565 407 + 172810 TACTAATAGCTTTTTAAAAAATAGTTCTTAACCAATTTTCCTAACACCTTCCTTTCCTCACTGAAGTATAGAAATATGTggtcaggcactgtggctcacacttataatcccaataatttgggaagccaaggcatgagggtcagttgattccaggagttcaagactagccagggtgacataaggatacttggtctctaacaaaaa-tttttttgttctttaattaccagggcatgatggtacatgcttgtagcccagctacttggaagactgaggtaagagaatcacttgagcccaggaggtcaaggctgcagtgagccatggttgcaccactgcacttcatacctgggtgacagagtgagacacagtatc-aaaaacaaacaaaaaacaacaaaaaGTATTTGTTTTAG s panTro5.chrY 298807 403 + 26350515 TA-TAATAACTTTTTAAAAAATAGTTCTTAACCAATTTTCCTAGCACTTTCCTTTCCTCAGTGAAGTATAGAAATATGTggtcaggcactgtggctcacacctataatcccaataatttgggaagccaaggcatggggatcagttgattccaggagttcaagactagccagggtgatataatgagacttggtctctaacaa----ttttttttttctttaattaccagggcatgatgttgcatgcctgtagcccagctacttgggaggctgaggtaggagaatcacttgagcccaggaggtcaaggctgcagtgagccatggttgcactactgcactccatacctggatgacagaatgagacacagtatc-aaacacaaacaaacaacaacaaaaaGTATTTGTTTTAG i panTro5.chrY C 0 C 0 s panPan2.chr11 88568959 403 + 134183262 TACTAATAGCTTTTTAAAAAATATTTCTTAACCAGTTTTCCTAGCACCTTCCTTTCCTCAGTGAAGTATAGAAATATGTggtcagggactgtggcttacacctataatcccaatcatttgggaagccaaagcatgagaatcagttgagtccaggagttcaagaccagccaaggagacataatgagacccagtctctaaaacaaa-ttttttt----tttaattaccagggcatgatggtgcatgcctgtagcccagctacttggaaggctgaggtaggagaatcgcttgagcccagaaggtcaaggctgcagtgagccgtggttgtgccactgcactccatacctgggtgacagagtgagacacagtatc-aaaaacaaacaaacaacaaaaaaaaGTATTTGTTTTAG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17526 401 + 57002 TACTAATAGCTTTTTAAAAAATAGTTCTTAACCAATTTTCCTAGCACCTTCCTTTCCTCAGTGAAGTATAGAAATATGTggtcaggcactgtggctcacacctataatcccaataatttgggaagccaaggcatgaggatcagttgattccaggagttcaagactagccagggtgacataatgagacttggtctctaacaaaat-ttttttt--tctttaattaccagggcatgatggtgcatgcctgtagcccagctacttggaaggctgaggtaggagaatcacttgagcccaggaggtgaaggctgcagtgagccatggttgcaccactgcactccatacctgggtgacagagtgagacacagtaac-aaaaacaaac----aacaacaaaaaGTATTTGTTTTAG i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 253662 399 - 11451906 GACTAATAGCTTTTTAAAAAATATTTCTTAATCAATTTTCCTAGCACCTTCCTTTCCTCAGTGAAGTATAGAAATATGTggtcaggcactgtggctcacacctgtaatcccgataatttgggaagccaaggcatgaggatcagttgagtataggagttcaacaccagccagggcaacataatgagactcgatccctaaaaaaaa-ttttttt---ctttaattaccagggcatgatggtgcatgcctatagcccagctacttggaaggctgaggtaggagaactacttgggcccaggaggtcaaggctgcagtgagccatggacgcaccactgtactccatacctgagacacagagtgagacacagtatcaaaaaaaaa------aaaaaaaaaaaGTGTTTGTTTTAG i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81230345 399 + 126035930 GACTAATAGCTTTTTAAAAAGTACTTCTTAATCAATTTTCCTAGCACCTTCCTTTCCTCAGTGAAGTATAGAAATATGTggtcaggcactgtggctcacacctgtaatcccgataatttgggaagccaaggcatgaggatcagttgagtccaggagttcaagaccagccagggcaacataatgagactcgatctctaaaaaaaatttttttt---ctttaattaccagggcatgatggtgcatgcctatagcccagctacttggaaggctgaggtaggagaactacttgggcccaggaggtcaaggctgcagtgagccatggatgcaccactgtactccatacctgggacacagagtgagacacaggatc-caaaaaaa------aaaaaaaaaaaGTGTTTGTTTTAG i chlSab2.chr1 I 231 C 0 s colAng1.NW_012116622v1 193883 398 + 3898586 AACTAATAGCTTTTTAAAAAATATTTCTTAGTCAATTTTCCTAGCACCTTCCTTTCCTCAATGAAGTATAGAAATATGTggtcaggcactgtggctcacacctgtaatcccgataatttgggaagccaaggcatgaggatcagttcagtccaagagttcaagaccagccagggcaaaataatgagactcgatctctaaaaataa-ttttttt---ctttaattaccagggcatgatggtgcatgcctatagcccagctacttggaaggctgaggtaggagaactacttgggcccaggaggtcaaggctgcagtaagccatggatgcaccactgtactccatacctgggacacagagtgagacacagtgtc-aaaaaaaa------aaaaaaaaaaaGTGTTTGTTTTAG i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=2548.000000 s hg38.chr14_KI270725v1_random 62972 1 + 172810 A s panTro5.chrY 299210 1 + 26350515 A i panTro5.chrY C 0 C 0 s panPan2.chr11 88569362 1 + 134183262 A i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17927 1 + 57002 A i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 254061 1 - 11451906 A i macNem1.NW_012010789v1 C 0 C 0 s papAnu3.chrUn_NW_003891869v1 6752 1 + 13741 A i papAnu3.chrUn_NW_003891869v1 N 0 N 0 s chlSab2.chr1 81230744 1 + 126035930 A i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 194281 1 + 3898586 A i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=8271.000000 s hg38.chr14_KI270725v1_random 62973 5 + 172810 AAAAA s panTro5.chrY 299211 5 + 26350515 AAAAT i panTro5.chrY C 0 C 0 s panPan2.chr11 88569363 5 + 134183262 AAAAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17928 5 + 57002 AAAAA i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 254062 5 - 11451906 AAAAA i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81230745 5 + 126035930 AAAAA i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 194282 5 + 3898586 AAAAA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=1365.000000 s hg38.chr14_KI270725v1_random 62978 1 + 172810 A s macNem1.NW_012010789v1 254067 1 - 11451906 A i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81230750 1 + 126035930 A i chlSab2.chr1 C 0 C 0 s nasLar1.chrUn_JMHX01274021v1 255 1 + 666 A i nasLar1.chrUn_JMHX01274021v1 N 0 N 0 s colAng1.NW_012116622v1 194287 1 + 3898586 A i colAng1.NW_012116622v1 C 0 C 0 s rhiRox1.KN297695v1 39368 1 + 134106 A i rhiRox1.KN297695v1 N 0 I 5676 e ponAbe2.chrUn 2074923 1355 + 72422247 I e gorGor5.CYUI01002012v1 17933 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569368 0 + 134183262 C e panTro5.chrY 299216 0 + 26350515 C a score=65632.000000 s hg38.chr14_KI270725v1_random 62979 36 + 172810 CATTTGGTGAGGTTGGGGCTTAAAAATATATTATTC s panTro5.chrY 299216 36 + 26350515 CATTTGGTGAGGTTTGGGCTTAAAAATATATTATTC i panTro5.chrY C 0 C 0 s panPan2.chr11 88569368 36 + 134183262 CGTTTGGTGAGGTTTGGGCTTAAAAATATATTATTC i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 17933 36 + 57002 CATTTGGTGAGGTTTGGGCTTAAAAATATATTATTC i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 254068 36 - 11451906 CATTTGATGAGGTTTGGGCTTAAAAATATATTATTC i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81230751 36 + 126035930 CATTTGGTGAGGTTTGGGCTTAAAAATATATTATTC i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 194288 36 + 3898586 CATTTGATGAGGTGTGGGCTTAAAAATGTATTATTC i colAng1.NW_012116622v1 C 0 I 315 e ponAbe2.chrUn 2074923 1355 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=961018.000000 s hg38.chr14_KI270725v1_random 63015 577 + 172810 TAAAATATTCATAAATATTCTCTAGTAATGATAAGATTAAAGTGACAaagacaaacttttttcctgtacagttccatctctcaccttcccgtaatttgtCTGTCCCATCCAGCTTCCAAAGGaaattatttacaaaataatgtctgcatcctgggtctatatatctattgcctatgaggagagcgtttaagatctgagccatcttcaagtcttatactttgtgtatagctctcatgtttttgcaggttaagtaagtttgtataccctttcttttattaatctgtgtatggtcagttcatttcgggtaatcttcagagggtgaaaggggaagcttttcacttcactcctacTGTGACAACTAACTACCTTCTTACTTATTCAATTTTTTAGTCTATATCAacactttcatatacatttacttttaaacaaaattttccatcattacacttaaaattttatttaccttttaaaaaggaaattaaaaataaaattaaaaattataaaattttacataataaaaataaaataaatgatttatataaaaattaaTCTGACCTGTGAAAAACACTATCCAGAg s panTro5.chrY 299252 577 + 26350515 TAAAATATTCATAAATATTCTCTAGTAACGATAAGATTAAAGTGATAaagacaaacttttttcctgtgcagtttcatctctcaccttctcataatttgcctgtcccatccagcttccaaaggaaactatttacaaaataatgtctgcatcctgggtctatatatctattgcctatgaggagagcatttaagatctgagccatcttcaaatcttatactttgtgtatatctctcatgtttttgcaggttaagtaagtttgtataccctttcttttattaatctgtgtatggtcagttcatttcgggtaatcttcagagggtgaaaggggaagcttttcacttcactcctacTGTGACAACTAACTACATTCTTACTTATTCAATTTTTTAGTCTATATCAACACTTTTATATACATTTACTTTTAAACAAAATTTTGCATCATTACACTTAAAATTGTATTTACCTTttaaaaaggaaattaaaaataaaattaaaaattataaAATTTTAcataataaaaataaaataaatgatttatataaaaattaatctgacctgtgaaaaacactatccagag i panTro5.chrY C 0 C 0 s panPan2.chr11 88569404 572 + 134183262 TAAAATGTTCATAAATATTGTCTAGTAATGATAAGATTAAAGTGACAAAGACAAA-TTTTTTCCTGTGCAGT----TCTCTCACCTTTCCGTAatttgtctgtcccatccagcttcctaaggaaattatttacaaaataatgtctgcatcctgggtctatatatctgttgcctatgaggagagcatttaagatctgagccatcttcaagtcttatactttgtgtacggctctcatgtttatgcaggttaagtaagtttgtatgccctttctcttattaatctgtgtatggtcagttcatttcgggtaatcgtcagagggtgaaaggggaagcttttcacttcactcctacTGTGACGGCCAACTACCTTCTTACTTATTCAGTTTTTTAGTATATATCAACACTTTTACATACCTTTAATTTTAAATAAAATTTTGCATCATTTCACTTAAAATTGTATTTACCTTTTAAAAAGGAAATTAAAAATAAATTTTAAAAATATAAAATTTtaaataataaaaataaaataaatgatttatataaaaattaatctgacctgtgaaaaacactatcaagag i panPan2.chr11 C 0 I 387 s gorGor5.CYUI01002012v1 17969 574 + 57002 TAAAATATTCATAAATATTCTCTAGTAATGATAAGATTAAAGTGACAaagacaaacttttttcctgtgcagttccatctctcaccttcccgtaatttgtctgtcccatccagcttccaaaggaaattatttacaaaataatgtctgcatcctgggtctatatatctattgcctatgaggagagcgttt-agatctgagccatcttcaagtcttatactttgtgtatagctctcatgtttttgcaggttaagtaagtttgtataccctttcttttattaatctgtgtatggtcagttcatttcgggtaatcttcagagggtgaaaggcgaagcttttcacttcactcctacTGTGACAACTAACTACCTTCTTACTTATTCAATGTTTTAGTCTATA-CAACACTTTTATATACATTTACTTTTAAACAAAATTTTGCATCATTACACTTAAAATTTTATTTACCTTttaaaaaggaaattaaaaataaaattaaaaattat-aaattTTAcataataaaaataaaataaatgatttatataaaaattaatctgacctgtgaaaaacactgtccagag i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 254104 559 - 11451906 TAAAATGTTCG-AAACATTCCCTAGTAATGATAAAATTAAAGTGACAaagacaaactttgttcctgtgcagttccatctctcaccttcccgtaa--tgtctgtcccatccagcttccacaggaaattatttacaaaataatgtctgtatactgggtctatatttctgttgcctatgaggagagcatttaagatctgagccatcttcaagtcttatactttgtgtatggctgtcatgtttatgcaggttaagtaagtttgtatgccctttctcttattaatctgtgtatggtcagttc----------atcttcagagggtgaaaggggaagattttcatttcactcctacTGTGACAGTCAACTACCTTTTTACTGATTCAACTTTTTAGTATATATCAATACTTTTACATACATTTACTTTTAAACAAAATTTTGCATCATTACACTTAAAATTCTACTTACCTTttaaaaagaaaattaaaaataaatttaaaaattataaaattttaaataataaaaataaaataaatgatttatataaaaattaat-----ctgtgaaaaacactatcaagag i macNem1.NW_012010789v1 C 0 I 388 s chlSab2.chr1 81230787 558 + 126035930 TAAAATGTTCG-AAACATTCCCTAGTAATGATAAGATTAAAGTGATAaagacaaactttgttcctgtgcagttccatctctcaccttcccgtaa--tgtctgtcccatccagcttccaaaggaaattatttacaaaataatgtctgtatcctgggtctatatttctgttgcctatgaggacagcatttaagatctgagccatcttcaagtcttatactttgtgtatggctgtcatgtttatgcatgttaagtaagtttgtatgccctttctcttattaatctgtgtatggtcagttc----------atcttcagagggtgaaaggggaagattttcacttcactcctacTGTGACAGTCAACTACCTTTTTACTGATTCAATTTTTT-GTATATATCAATACTTTTACATACATTTACTTTTAAACAAAATTTTGCCTCattacacttaaaattctacttaccttttaaaaagaaaattaaaaataaatttaaaaattataaaattttaaatAATaaaaataaaataaatgatttatataaaaattaat-----ctgtgaaaaacactatcaagag i chlSab2.chr1 C 0 I 388 s colAng1.NW_012116622v1 194639 560 + 3898586 TAAAATGTTCGTAAACATTCCCTAGTAATTATAAGATTAAAGTGATAaagacaaactttgttcccgtgcagtttcgtctctcaccttcccgtaa--tGCCTgtcccatccagcttccaaaggaaattatttacaaaataatgtctgcatcctgggtctatatttctgttgcctatgaggaaagcatttaaaaactgagccatcttcaggtcttatactttgtgtatggctgtcatgtttatgcaggttaagtaagtttgtatgccctttctcttattaatctgtgtatgatcagttc----------atcttcagagggtgaaaggggaagattttcacttcactcctacTGTGACAGTCAACTACCTTTTTACTGATTCAATTTTTTAGTATATATCAATACTTTTACATACATTTACTTTTAAACAAAATTTTGCATCGttacacttaaaattctacttaccttttaaaaagaaaattaaaaataaatttaaaaattataaaattttaaatAATaaaaataaaataaatgacttatataaaaattaat-----ctgtgaaaaacactatcaagag i colAng1.NW_012116622v1 I 315 I 388 e ponAbe2.chrUn 2074923 1355 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=24845.000000 s hg38.chr14_KI270725v1_random 63592 96 + 172810 gccaggcgcggtggttaacgcttgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggcgatctagaccacgatgaaacccc s panTro5.chrY 299829 96 + 26350515 gccagtcgcactgactaacgcttgtaatcccagcaccttaggaggccaaggtgggtggatcacgaagttaggcgatctagaccacgatgaaacccc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 18543 96 + 57002 gccaggcgcggtggctaacgcttgtaatcccagcactttgggaggccgaggtgggtggatcacgaggtcaggcgatctagaccacgatgaaacccc i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2074923 1355 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=-1535.000000 s hg38.chr14_KI270725v1_random 63688 1 + 172810 -a s panTro5.chrY 299925 1 + 26350515 -t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 18639 1 + 57002 -t i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2076278 1 + 72422247 g- i ponAbe2.chrUn I 1355 I 202 e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=49153.000000 s hg38.chr14_KI270725v1_random 63689 198 + 172810 ctctaccaaaaatacaaaaaaatagccgggtgtagtggcgggctcctgtagtcccagccactcaaagaggctgaggcaggagaatggcgtgaatccaggaggcggagcttgcagtgagccgagatcgtgccactgcaatccagcctgggtgacagagccagactctgtcaaaaaaaaaaaaaaaa----gaaaaagaaaaac s panTro5.chrY 299926 197 + 26350515 ctctaccaaaaatacaaaaaattaggcgggtgtagtggcgggcgcctgtagtcccagacactcagagaggctgaggcgggagaatgacgtgaacccagcagacggagcttacagtgagccaagattgtgccactgcaaaccagcctgggtgacagagccagactctgtcaaaaaaaaaaaaagaa-----aaaaagaaaaac i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 18640 202 + 57002 ctctaccaaaaatacaaaaaattagctgggcgtagtggcgggcgcctgtagtcccagccactcggagaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgtgccactgcaatccagcctgggtgacagagccagactctgtcaaaaaaaaaaaaaaaaaaaagaaaaagaaaaac i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2076279 202 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=-1107.000000 s hg38.chr14_KI270725v1_random 63887 1 + 172810 -a s panTro5.chrY 300123 1 + 26350515 -a i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 18842 1 + 57002 -a i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2076481 1 + 72422247 c- i ponAbe2.chrUn I 202 I 512 e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=131516.000000 s hg38.chr14_KI270725v1_random 63888 497 + 172810 ctatcgagagaataaaaagacaaatcacagactgggagtaaaaatttacaaaagctatatctggtgaagatacatttgttatccaaaatatacaaagaactctcaggactcaataataggaaaacaaatagtctaacacaaatgtagagatctgaacagacatttcaccatagaatacagatggatgatacgtaagaacattgaaagatgttcaacatcattcatcattagggaaatgtaaattaaaaccacaatgagatactgctacatgcctattagaatagctaaaatttaaaagactgaccatactaaacattggtgagaacacaaaggaacaggaatgctcatacactgctgctggaaatacagccactttgtcagtttctttaaaagttaaactggccgggagcggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacgaggtcgggaaatcgagaccatcctagctaaca s panTro5.chrY 300124 497 + 26350515 ctcttgagagaataaaaagacaaatcacagactgggagtaaaaatttacaaaagctatatctggtgaagatacatttgttatccaaaatatacaaagaactctcaggactcaataataggaaaataaatagtctaacacaaatatagagatctgaacagacatttcaccatagaatacagatggataatatgtaagcacattgaaagatgttcaacatcattcatcattagggagatgtaaattaagaccacaatgagatattgctacatgcctatttgaatagctaaaatttaaaagactgaccatactaaacattggtgagaacacaaaggaacaggaatgctcatacactgctactggaaatacaggcactttgtcagtttatttaacagttaaactggccaggagtggtagctcatgcctgtaatcccaacactttgggaggccaaggcgggcggatcacgcagtcgggaaatcaagaccatcctagctaaca i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 18843 496 + 57002 ctatcgagagaataaaaagacaaatcacagactgggagtaaaaatttacaaaagctatatctggtgaagatacatttgttatccaaaatatacaaagaactctcaggactcaataataggaaaacaaatagtctaacacaaatgtagagatctgaacagacatttcaccatagaatacagatggatgatacgtaagcacattgaaagatgttcaacatcattcatcattagggaaatgtaaattaaaaccacaatgagatactgctacatgcctattagaatagctaaaatttaaaagactgaccatactaaacattggtgagaacacaaaggaacaggaatgctcatacactgctgctggaaatacagccactttgtcagtttctttataagttaaacTggctgggagcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcggatcacaaggtcggg-aatcgagaccatcctagctaaca i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=2010.000000 s hg38.chr14_KI270725v1_random 64385 21 + 172810 cggtgaaaccccgtatctact s panTro5.chrY 300621 21 + 26350515 cggtgaaaccccgtatctact i panTro5.chrY C 0 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=2505.000000 s hg38.chr14_KI270725v1_random 64406 14 + 172810 aaaaatacaaaaaa s panTro5.chrY 300642 14 + 26350515 aaaaatacaaaaaa i panTro5.chrY C 0 C 0 s papAnu3.chr7 138263973 14 - 162156779 aaaagaaaaGaaaa i papAnu3.chr7 N 0 N 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=13627.000000 s hg38.chr14_KI270725v1_random 64420 161 + 172810 ttagccgggcgtggtggcgagcgcctgtaatcccagctactccggaggctgaggcaggagaatggcgtgaacctgggaggcggagctttcagtgagcctccatgcaccactgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaa s panTro5.chrY 300656 161 + 26350515 ttagccgggcgtggtggcaagcgcctgtaatcccagctattctggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgcgatgcaccactgcactccagcctgtgcgacagagcgagactccatctcaaaaaaaaagaaa i panTro5.chrY C 0 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e colAng1.NW_012116622v1 195199 388 + 3898586 I e chlSab2.chr1 81231345 388 + 126035930 I e macNem1.NW_012010789v1 254663 388 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88569976 387 + 134183262 I a score=474789.000000 s hg38.chr14_KI270725v1_random 64581 439 + 172810 aaaat----------ttaaacatatcacaccacttagtcattcaaatcctgcttatttgcccaagacaaatgaaagcgtatgtccaaacgattggacaaacattcgtagcaactttatttgaaatagcaaaaacaactggaagcaaaccaaatgtccatcaagaggtgagtagatacactaactgtagaatatccatacaataaaaCTTTTTTTT--AAACTAAGGGGCAAAAAACAAAAAAACAAAGATAGAATCTAACTTCTTGGTAAATACATTCACTATTAGGG-TTTTTATAACAGAGAAGTCATTCTTTATTAACACTCTTTTGACTATTAAAATATTTTGACATCAAAAATCTGCAAAATATGAAGAAACAAG--------GGACACACAG-CTTTTTCTATtttctatttttattttatttttatttttttgagaaggagtctctttctgtca s panTro5.chrY 300817 452 + 26350515 aaaaaaaaagaaaaattaaacatatcacaccacctagtcattcaaatcctgcttatttgcccaagacaaatgaaagcgtatgtccaaacgattggacaaacattcatagcaactttatttgaaatagcaaaaacagctggaagcaaaccaaatgtccatcaaaaggtgaatagatacactaactgtagaatatccatacaataaaaCTTTTTTTTTTAAACTATGGGGCAAAAAACAAAAAACCAAAGATAGAATCTAACTTCTTGGTAAATACCTTCACTATTAGGG-TTTTTATAACAGATAATTCATTCTTTATTAACACTCTTTTGACTATGAAAATATTTTGACATCAAAAATCTGCAAAATATGAAGAAACAAA--------GGACACATAGattttttttattatttatttttattttatttttatttttttgagaaggagtgtctttctgtca i panTro5.chrY C 0 C 0 s panPan2.chr11 88570363 435 + 134183262 aaaag----------ttaaacatatcacaccacctagtcattcaaatcctgcgtatttacccaagacaaatgaaagcgtatgtccaaacagttgg----acattcatagcaactttatttgaaatagcaaaaacaactggaagcaacccaaatgtccatcaagaggtgaaaagatacactaactgtagaatatccatacaataaaaCTATCTTTT-TTAACTACGGGGCAAAAAACAAAAAACCAAAGATAGAATCTAACCTCTTGGTAAATACCTTCACTATTTGGGTTTTTTATAACAGAGAATTCATTCTTTATTAATACTC--TTGACTATGAAAATATTTTGACATCAAAAATCTGCAAAATATGAATAAACAAGCAAACAAAGGACACACAG-CTTTt-------tttatttttattttatttttatttttttt-gagacagtctcgctctgttg i panPan2.chr11 I 387 C 0 s macNem1.NW_012010789v1 255051 429 - 11451906 aaaag----------ttaaacatatcacaccacctcttcattcaaattctgcttatttacccaagacaagtgaaagtgtatgtccaaacggttggacaaacattcatagcagctttatttgaaatagcaaaaacaactggaagcaagccaaatgtccatcaagatgtgaatagatacactaactgtagaatatccatacaataaaaCTATTTTTAAAAAATTATGGGGC-AAAAACAAAAAAACAAAGATAGAATCTAACCTCTTGATAAATACATTCACTATTAGGG-TTTTTATAACAGAGAAGTCATTCTTTATTAATACTC--TTGACTATGAAAATATTTCGACATCAAAAATCTGCAAAATATAAATAAACAAGCAAACAAAGGACACACAA-Ctttt-----------tttt------ttttttttttttttgagactgagtcttgctctgtca i macNem1.NW_012010789v1 I 388 C 0 s chlSab2.chr1 81231733 423 + 126035930 aaaag----------ttaaacatatcacaccacctcgtcattcaaattctgcttatttacccaagacaaatgaaagcgtatgtccaaacagttggacaaa----catagccgctttatttgaaatagcaaaaacaactggaagcaagccaaatgtccatcaagatgtgaatagatacactaactgtagaatatccatacaataaaaCTATTTTTTAAAAATTATGGGGC-AAAAACAAAAAAACAA----AGAATCTAACCTCTTGGTAAATACATTCACTATTAGGG-TTTTTATAACAGAGAAGTCATTCTTTATTAATACTC--TTGACTATGAAAATATTTCGACATCAAAAATCTGGAAAATATAAATAAACAAGCAAACAAAGGACACACAA-Ctttt-----------tttt----tatttttattttttttgagactgagtcttgctctgtca i chlSab2.chr1 I 388 C 0 s colAng1.NW_012116622v1 195587 432 + 3898586 aaaag----------ttaaacatatcacaccacctcgtcattcaaattctgcttatttacccaagacaaatgaaagcgtatgtccaaacggttggacaaacattcatagcaactttatttgaaatagcaaaaacaactggaagcaagccaaatgtccatcaagatgtgaatagatacactaactgtagaatatccatacaataaaaCTATTTTTTAAAAATTACGGGGCAAAAAACAAAAAAACAA----AGAATCTAACCTCTTGGTAAATACATTCACTATTAGGG-TTTTTATAACAGAGAAGTCATTCTTTATTAATACTC--TTGACTATGAAAATATTTCGATATCAATAATCTGCAAAATATAAATAAACAAGCAAACAAAGGATACACAA-Ctttt-----------ttttttttttttttttttttttttgagactgagtcttgctctgtca i colAng1.NW_012116622v1 I 388 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=3047.000000 s hg38.chr14_KI270725v1_random 65020 4 + 172810 caca s panTro5.chrY 301269 4 + 26350515 ccta i panTro5.chrY C 0 C 0 s panPan2.chr11 88570798 4 + 134183262 ccca i panPan2.chr11 C 0 C 0 s macNem1.NW_012010789v1 255480 4 - 11451906 tgca i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81232156 4 + 126035930 tgca i chlSab2.chr1 C 0 C 0 s nasLar1.chrUn_JMHX01041124v1 1766 4 + 1772 TGCA i nasLar1.chrUn_JMHX01041124v1 N 0 N 0 s colAng1.NW_012116622v1 196019 4 + 3898586 tgca i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=199277.000000 s hg38.chr14_KI270725v1_random 65024 180 + 172810 ggctagagtgcagtggtgcgatcttagctcacttcaagc-tgtgcct-cccagttcacgccattctcctgcctcagtctcccgagtagctgggactacaggcgcccgccaccaagcccagctaattttttgtatttttagtagagacggggtttcacc--gttagcca--------ggatggtctcaatc-cc s panTro5.chrY 301273 181 + 26350515 ggctggagtgcagtggcgcgatcttagctcactgcaagg-tgcacct-cccggttcacgccattttcctgcctcagtatcccgaatagctgggactacaggtgcccaccaccaagcccggctaattttttgtatttttagtagagacagggtttctcc--gttagcca--------ggatggtctcaatctcc i panTro5.chrY C 0 C 0 s panPan2.chr11 88570802 192 + 134183262 ggctggagtgcagtggggcgatctctgctcactgcaagc-tctgcctgccgggttcacaccattctactgcctcagcctcccgagtagctgggactacaggcacctgccaccacacccggctaattttttgtgtttttagtagagacggggtttcaccgtgttagccaggatggtcggatggtcttgatctcc i panPan2.chr11 C 0 C 0 s macNem1.NW_012010789v1 255484 192 - 11451906 cgctggagtgcagtggcacgatcttggctcactgcaagcttccgcctcccaggttcacgccattctcctgcctcagactcccgagtagctgggactacaggcgccggcctccacgcctggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggccagatggtctcgatctc- i macNem1.NW_012010789v1 C 0 I 1 s chlSab2.chr1 81232160 192 + 126035930 cgctggagtgcagtggcacgatcttggctcgctgcaagcttccgcctcccaggttcacgccattctcctgcctcagactcccgagtagctgggactacaggcgccggcctccacgcccggctaatttttcgtatttttagtagagacggggtttcaccatgttagccaggatggccagatgttctcgatccc- i chlSab2.chr1 C 0 I 275 s colAng1.NW_012116622v1 196023 192 + 3898586 ggctggagtgcagtggcatgatcttggctcgctgcaagcttccgcctcccaggttcaggccattctcctgcctcagactcccaggtagctgggactacaggcgccggcctccacgcccggctaattttttgtatttttagtagagacggggtttcaccatgttagccaggatggccggatggtctcgatctc- i colAng1.NW_012116622v1 C 0 I 1 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=1436476.000000 s hg38.chr14_KI270725v1_random 65204 1172 + 172810 tgacctcgtgatctgcccgcctcggcctctcaaagtgctgggattacaggcgtgagccaccgcccccggccCCAGGACACACAGCTTTAAAATTTCTCATTGGTCTCACCCAGTGCCAACCACCTAAAACCTCTCATTTTCCCCCAGACATTTCTTCTGCCTCCAGGATGGAGGTAGAGAATCTTGGCCTTGGGCCACGCACTGGGGACCATGCTAGGCTGCCGTGGTCAGTGACAGACTCAGGTTCTCACCAGCATCCCCAAAATAGGCCCCTG---AAAAAAATGTTA-CCATCAGGGTGCGCTCCCTGATTCTTGTGTCTGCTGGAAGGAGGAAATCAAGCCAGGAACGTTGTCAGGATAGAGATGAAAATGGGGCTCACTTTTCTGTCTCTTGTGATGTCAGACAAGCCTTTCAGCTCTGTCTCCTCAGCCCTCATGGAATCGTTTGGTGTGGACGCACCGAGATTCTGAACTGGGTctcctttccctctgcccttctctggggccagattctgagctctccattccaatttttcccccaatttgcccttgcgtttatttatctggattactgtctgcctgtcccaaagaataaaagctttatcacagtgggaactttgtttaaaaaaataataataacagctatatttttaggatccatgacactgtccagcatatcggtggtatctgataaaaaatgtttgttgactgaatg----aaCAAATATATTATTCACAAT-TCACATTATCCTGAACTGGCTAGAAAATTAAATATCTGATATCAGTATTGGCAGCATTATGAAGTAAATATAATTCTGACACAGTGCTCGTGAAAGTCTAATATGAAATGCTCATTTTAGAAAACATTTTCTTGTAGATTTGAAAATGTTTCATCTCCATGAACTAGTTGTATATCTGCAAGTTGCGTTTCTTTGGGTtaggcagaataattgctccccaccaaagacagccacatcccagtcttcagataaggtgaacatgctaaagtaagttagcatgttcaaagggacttggcagatgtgattaccattaagggcattgaaatggggaaattaccttgaattaccttggtgagtccaatctaatctcataattccttgagagcagagaatattttctggatgctgagattcagacagatgacagtatgagaaag s panTro5.chrY 301454 1171 + 26350515 tgacctcgtgatctgcccaccttggcctctcaaagtgctgggattacaggcgtgagccaccgcccccagccCCAGGACACACAGCTTTAAAATTTCTCCTTTGTCTCGCCCAGTGCCAACCACCTAAAACCTCTCATTTCCCCCCAGACATTTCTTCTGCCTCTAGGATGGAAGTAGAGAATCTTGGCCTTGGGACACGCACTGGGGACCATGCTGGGCTGCCGTGGTCAGTGACGGACTCAGGTTCTCACCAGGATCCCCAACATAGGCCCCTG---AAAAAAATGTTA-CCATCAGGGTGCGCTCCCTGATTCTTGTGTCTGCTGGAAGGAGGAAATCAAGCCAGGAACATTGTCAGGATAGAGATGAAAATGAGGCTCACTTTTCTGTCTCTTGTGATGTCAGACAAGCCTTTCAGCTCTGTCTCCTCAGTCCTCATGGAATTGTTTGGTGTGGACACACCGAGATTCTGAACTGGGTCCCCTTTCCCTCTGCCCTTCTCTGGGGCCAGATTCTGAGCTCTCCATTCCAATTTTCCCCCCAATTTGCCCTTGCatttatgtatcttgattactgtctgcctgtcccaaagaataaaagctttatcacagtggggattttgtttaaaaaaataataataacacctatatttttgggagccatgacactctccagcatataggtggtatctgataaaaaatgtttgttgactgaatg----aaCAAATATATTATTCACAAT-TCCCATTATCCTGAACTGGCTAGAAAATTAAATATCTGATATCAGTATTGGCAACATTATGAAGTAAATATAATTCTGATACAGTGCTCATGAAAGTCTAATATGAAATGCTCATTTTAGAAAACATTTTCTTGTAGATTTGAAAATGTTTCATCTCCATGAACTAGTTGTATATCTGCAAGTTGTGTTTCTTTGGGTtaggcagaataattgcccaccaccaaagacagccacatcccagtcttcagataaggtgaacatgctaaagtaagttagcatgtccaaagggacttgacagatgtgattaccattaagggcattgaaatggggaagttaccttgaattaccttggtgaa-ccaatctaatctcataattacttgagagcagagaatattttctggatgctgagattcagacagatggcagtatgagaaag i panTro5.chrY C 0 C 0 s panPan2.chr11 88570994 1162 + 134183262 tgacctcgtgatctg-tcgcctcggcctctcaaagtgctgggattacaggcgtgagccaccgcgcccgaccCCAGGACACACAGCTTTAAAAGCTCTCCTTGGTCTCACCCAGTGCCAACCAACTAAAACCTCTCATTTTCCCCCAGGCATTTCTTCTGCCTCCAGGATGGAGGTACAGAATCTTGGCCTTGGGCCACGCACTGGGGACCATGCTGGGCTGCCGTGGTCAGCGACAGACTCAGGTTCTCACCAGGAGCCCCAGGATAAGCCCCTG--AAAAAAAATGTTACCCCTCAGGGTGTGCTCCCTGATTCTTGTCTCTGCTGGAAGGAGGAAATCAAGCCAGGAACATTGTCAGGAGAGAGATGAAAATGGGGCTCAGGTTTCTGTCTCTTGTGATGTCAGACAAACCTTTCAGTTCCATCTCCTCAGGCCTCATGGAATTGTTTGGTGTGGACGCACTGAGATTCTGAACTGGGTCCCCTctccctctgcctttctctggggccagatcctgagctctccaatccaatttttcccccaatttgaccttggatttatgtatctcaattactgtctgcctgtcccaaagaatagaagctgtattgcagcagggacattgtttaaaaaaataataataacagctatatttttaggatccatgacactgtccagcatatcggtggtatatgataaaaaa-gtttgttgaatgaatg----aaCAAATATATTATTCACAATGTCACATTATCCTGAACTGATGAGAAAATTAAATATCTGATGTCAGTATTGGCAATATTATGAAGTAAATATAATTCTGATACAGTACTGGTGAAAATCTAACAAGAGATGCTCATTTTAGAAAACATTTTCTTGTAGATTTGAAAATGTTTAATCTCCATGAACTAGTTGTATATCTGCAAGTTGTGTATCTTTGGGTTAGGCAT-----CTGCCCcccaccaaaggcagccacatcccagtcttcagataaggtgaacatgctaagtta------tatgctaaaaggggctttgcagatgtgattaccattaagggcattgaaatggggaaattaccttgaattatcttggtgagtccaatctaatctcataattccttgagagcagagaatattttctggatgcagagattcagacagatggcagtatgagaaag i panPan2.chr11 C 0 C 0 s macNem1.NW_012010789v1 255677 1168 - 11451906 tgagctcgtgatctgcccgcttcggcctctcaaagtgctgggattacaggcgtgagccaccgcgcccagccCCAGGACACACAGCTTTAAAAGCTCTCCTTGGTCTCACCCAGTGCCAACCACCTAAAACCTCTCATTTTCCCCCAGTCATTTCTTCTGCCTCCAGGATAGAGGCACAGACTCTCGGCCTTGGGTCACGCACTGAGGACCATGCTGGGCTACCGTGGTCAGCAATGGACTCAGGTTCTCACCAGGAGCCCCAAGATAGGCTCCTT--AAAAGAAATGTTACCCATCAGGTTGCACTTCCTGATTCTTGTCTCTGCTGGAAGGAGGAAATCAAGCCAGGAACATTGTCAGGAGAGAGATGAAAATGGGGCTCAGGTTTCTGTCTCTTGTGATGTCAGACAAGCCTTTCAGCTCCTTTTCCTCAGCCCTCATGGAATTGTTTGGTGTGCACGCATCGAGATTCTGAACTGGGTCCCCActctctctgcccttctctggtgccagatcctgaactctccaatctaatttttcccccaatttgcccttgcatttatttatctggattactgtctgcctgtcccaaagaatgaaagctttatcacagcagggactttgttt-aaaaaataataataacggttatatttttaggatccatgacactgtccagcatattggtgatatctgataaaaaatgtttgttgaatgaatg----aaCAAATATATTATTCACAATGTCACATTATCCTGAACTGACTAGAAAATTAAGTATCTGATGTCAGTATTGATGACATTATGAAGTAAATATAATTCTGATACAGTGCTGGTGAAAATCTAATAAGAGATGCTCATTTTAAAAAACATTTTCTTGTAGATTTGAAAATGTTTAATCTCCATGAACTAGTTGTATATCTGCAAGTTGTGTATCTTtgggttaggcagaataattggcccccaccaaagacagctacatcccagtcttcagatacggtgaacatgctaactta------catgctaaaagggactttgcagatgtgattaccattaacggcattgaaatggggaaattaccttgaattatcttggtgagtccaatttaatctcataattccatgagagcagagaatattttctggatgcagagattcagacagatggcagtatgagaaag i macNem1.NW_012010789v1 I 1 C 0 s chlSab2.chr1 81232627 1173 + 126035930 tgacctcgtgagctgcccgcttcggcctctcaaagtgctgggattacaggcgtgagccaccgcgcccagccCCAGGACACACAGCTTTAAAAGCTCTCCTTGGTCTCACCCAGTGCCAACCACCTAAAACCTCTCATTTTCCCCGAGTCATTTCTTCTGCCTCCAGGATGGAGGTACAGACTCTCGGCCTTGGGTCACGCACTGAGGACCACGCTGGGCTACTGTGGTCAGCGATGGACTCAGGTTCTCACCAGGAGCCCCAAGATAGGCTCCTG-AAAAAAAAATGGTACCCATCAGGTTGCGCTTCCTGATTCTTGTCTCTGCTGGAAAGAGGAAATCAAGCCAGGAACATTGTCAGGAGAGAGATGAAAATGGGGCTCAGGTTTCTGTCTCTTGTGATGTCAGACAAGCCTTTCAGCTCCTTCTCCTCAGCCCTCATGGAATTGTTTGGTGTGCACGCATCGAGATTCTGAACTGGGTCCCCActctctctgcccttctctggggccagatcctgaactctccaatctaatttttcccccaatttgcccttgcatttatttatctggattactgtctgcctgtcccaaagaatgaaagctttatcatagcagggactttgttt-aaaaaataataataacggttatatttttaggatccatgacactgtccagcatattggtgatatctgataaaaaatgtttgttgaatgaatgaaCAAACAAATATATTATTCACAATGTCACATTATCCTGAACTGACTAGAAAATTAAGTATCTGATGTCAGTATTGACAACATTATGAAGTAAATATAATTCTGATACAGTGCTGGTGAAAATCTAATAAGAGATGCTCATTTTAAAAAACATTTTCTTGTATATTTGATAATGTTTAATCTCCATGAACTAGTTGTATATCTGCAAGTTGTGTATCTTtgggttaggcagaataattgccccccaccaaagacagttacatcccagtcttcagatacggtgaacatgctaactta------catgctaaaagggactttgcagatgtgattaccattaacggcattgaaatggggaaattaccctgaattatcttggtgagtccaatttaatctcataattccttgagagcagagaatattttctggttgcagagattcagacacatggcagtatgagaaAG i chlSab2.chr1 I 275 I 403 s colAng1.NW_012116622v1 196216 1170 + 3898586 tgacctcgtgatctgcccgcttcggcctctcaaagtgctgggattacaggcgtgagccaccgcgcccagccCCAGGACACACAGCTTTAACAGCGCACCTTGGTCTCACCCAGTGCCAACCACCTAAAACCTCTGATTTTCCCCGAGTCATTTGTTCTGCCTCCAGGATGGAGGCACAGACTCTTGGCCTTGGGTCACGCACTGAGGACCATGCTGGGCTGCCGCGGTCAGCGACGGACTCAGGTTCTCACCAGGAGCCCCAAGATAGGCTCCTGAAAAAAAAAATGGTACCCATCAGGTTGCGCTTCCTGATTCTTGTCTCTGCTGGAAGGAGGAAATCAAGCCAGGAACATTGTCAGGAGAGAGATGAAAACGGGGCTCAGGTTTCTGTCTCTTGTGATGTCAGACAAGCCTTTGAGCTCCTTCTCCTTAGCCCTCATGGAATTGTTTGGTGTGCACACATCGAGATTCTGAACTGGGTCCCCActctctctgcccttctctggggccagatcctgaattctccaatctaatgtttcccccaatttgcccttgcgtttatttatctggattactgtctgcctgtcccaaagaataaaagctttatcacagcagggaccttgttt-aaaaaatagtaataacagttatatttttaggatctatgacactgtccagcatattggtggtatctgataaaaaatgtttgttgaatgaatg----aaCAAATATATTATTCACAATGTCACATTATCCTGAACTGACTAGAAAATTAAATATCTGATGTCagtattggcgacattatgaagtaaatataattctgatacagtgctggtgaaaatctaataagagatgctcattttaaaaaacattttCTTGTAGATTTGAAAATGTTTAATCTCCATGAACTAGTTGTATATCTGCAAGTTGTGTATCTTtgggttaggcagaataattgccccccaccaaagacagctacatcccagtcttcagatatggtgaatatgctaactta------catgccaaaagagacgttgcagatgtgattaccattaagggcattgaaatggggaaattatcttgaattatcttggtgagtccaatttagtcccataattccttgagagtagagaatattttctggatgcagagattcagacagatggcagtatgagaaag i colAng1.NW_012116622v1 I 1 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=100181.000000 s hg38.chr14_KI270725v1_random 66376 119 + 172810 atgtggcctgctattactggcttttaaaacagtggtagggggccacaagccaaggaaagccagtgacctttagaagctgggaatgacccaaagttttcaaccaggaag-aaactgaggat s panTro5.chrY 302625 119 + 26350515 atgtggcctgctattactggcttttaaaacagtggtagggggccacaagccaaggaaagccagtgagatttagaagctgggaataacccaaagtttacaactaggaag-aaactgaggaa i panTro5.chrY C 0 C 0 s panPan2.chr11 88572156 119 + 134183262 atgtagcctgctattactggcttttaaaacagtggaagggggccacaagccaaggaaagccagtgacctttagaagctgggaatgacccaaagtttacaaccaggaag-aaaccgaggat i panPan2.chr11 C 0 I 7 s macNem1.NW_012010789v1 256845 120 - 11451906 atgtggcctgctattactggcttttaaaacagtggaagggggccacaatccaaggaaagccagtgacctttagaagctgggaatgacccgaagtttacaaccagaaagaaaaccgaggat i macNem1.NW_012010789v1 C 0 I 7 s colAng1.NW_012116622v1 197386 120 + 3898586 atgtggcctgctattactggcttttaaaaccgtggaagggggccacaatccaaggaaagccagtgacctttagaagctgggaatgacccgaagtttacaaccagaaagaaaaccgaggat i colAng1.NW_012116622v1 C 0 I 7 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e chlSab2.chr1 81233800 403 + 126035930 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=286268.000000 s hg38.chr14_KI270725v1_random 66495 232 + 172810 ctacaaccacaaggaactgaattctgccaacaacccagatgctcttttagagccttcagaaagaaatgcagcctgccaacatcttgatgttagttcagtgagagccatgccagatttccaaccaaaacaattctaagacaa---gtttatgtgtgttttttaaaactgactcaaatcttacaaaaat-gtgtacttttaagccactgaatttgtggtaagttattacagcaggaat s panTro5.chrY 302744 236 + 26350515 ctacaaccacaaggaactcaattctgccaacaacccagatgctcttttagagccttcagaaagaaatgcaggctgccaacatcttcatattagttcagtgagagccatgccagatttccaaccaaaacaattctaagacaataagtttgtgtgtgttttttaaaactgactcaaatcttacaaaaaaagttttcttttaagccactgaatttgtggtaaattgttacagcaggaat i panTro5.chrY C 0 C 0 s panPan2.chr11 88572282 235 + 134183262 ctacaaccacaaggaactgaattctgccaacaacccagattctctcttagagccttcagaaagaaatgcagcctgccaacatcttgatgttagttcaatgagagccataccagatttctaaccaaaacaactctaagataataagtttgtgtgtgtgttttaaaacaggctaaaagcttataaaaat-gtgttcttttaagccactaagtttgtagtaaattgttatagcaggaat i panPan2.chr11 I 7 I 933 s macNem1.NW_012010789v1 256972 235 - 11451906 ctacaaccacaaggaactgaattctgccaacaacccagattctctcttagagccttcagaaagaaatgcagcctgccaacatcttgatgttagttcagtgaaagccataccagacttccaaccaaaacaactccaagataataagtttgtgtgtgttttttaaaacagactcaaatcttaaaacaat-gtgttcttttaagccaataagtttgtggtaaattgctataccaggaat i macNem1.NW_012010789v1 I 7 C 0 s chlSab2.chr1 81234203 235 + 126035930 ctacaaccacaaggaactgaattctgccaacaacccagattctctcttagagccttcagaaagaaatgcagcctgccaacatcttgatgttagttcagtgaaagccgtaccagacttccaaccaaaacaactccaagatagtaagtttgtgtgtgttttttaaaacagactcaaatcttaaaaaaat-gtgttcttttaagccaataagtttgtggtaaattgctatagcaggaat i chlSab2.chr1 I 403 C 0 s colAng1.NW_012116622v1 197513 235 + 3898586 ctacaaccacgaggaactgaattctgccaacaacccagattctctcttagagccttcaggaagaaatgcagcctgccaacatcttgatgttagttcagtgaaagccataccagacttccaaccaaaacaactccaagataataagtttgtgtgtgttttttaaaacagactcaaatcttaaaaaaat-gtgttcttttaagccaatcagtttgcagtaaattgttatagcaggaat i colAng1.NW_012116622v1 I 7 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=97275.000000 s hg38.chr14_KI270725v1_random 66727 82 + 172810 agaaaactaatacaACCCTAGAGAAAGTCTTGTACATGTGCTCTATAAACACACAGCAGAATTTTTTTAACTTTTTATTGAG s panTro5.chrY 302980 81 + 26350515 agaaaactgatacaACCCTAGAGAAAGTCTTGTACATGTGCCCTATAAACACACAGCAGAAtttttttaacctttt-ttgag i panTro5.chrY C 0 C 0 s panPan2.chr11 88573450 82 + 134183262 aGAAAACTGATACAACCCTAGAGAAAGTCTTGTACATATGCCCTATAAACACACAACAGAGTATTTTTAATTTTTTATTGAG i panPan2.chr11 I 933 C 0 s macNem1.NW_012010789v1 257207 81 - 11451906 agaaaactgatacaACCCTAGAGAAAGTCTTGTACATGTGCCCTATAAACACACAGCAGAAT-TTTTTAATTTTTTATTGAG i macNem1.NW_012010789v1 C 0 I 3 s chlSab2.chr1 81234438 81 + 126035930 aaaaaactgatacaACCCTAGAGAAAGTCTTGTACATGTGTCCTATAAACACACAGCAGAAT-TTTTTAATTTTTTATTGAG i chlSab2.chr1 C 0 I 36 s colAng1.NW_012116622v1 197748 81 + 3898586 agaaaactgatacaAACCTAGAGAAAGTCTTATACATGTGCCCTATAAACACACAACAGAAT-TTTTTTATTTTTTTTTGAG i colAng1.NW_012116622v1 C 0 I 1 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=6039.000000 s hg38.chr14_KI270725v1_random 66809 16 + 172810 TTAAAAA---ATATATGTA s panTro5.chrY 303061 16 + 26350515 ttaaaaa---atacatata i panTro5.chrY C 0 C 0 s panPan2.chr11 88573532 19 + 134183262 ATAAAAATGTATATATATA i panPan2.chr11 C 0 C 0 s macNem1.NW_012010789v1 257291 15 - 11451906 -TTATAT---ATATATATA i macNem1.NW_012010789v1 I 3 I 2 s colAng1.NW_012116622v1 197830 15 + 3898586 -Ttatat---atatatatg i colAng1.NW_012116622v1 I 1 I 12 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e chlSab2.chr1 81234519 36 + 126035930 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=240684.000000 s hg38.chr14_KI270725v1_random 66825 195 + 172810 TAATTTACCATCTGTACATTTTTAGAGGACAGTTTAGTGGTGATAAATACATTTATATTTTcttctcttaatctcctcttccaactccccttgctggcctctagcaaccaccaatttactttctatcttcatgagattcacttttttactgcccacatatgagtgacaacatgtgatatttgcctttctgtgctt s panTro5.chrY 303077 195 + 26350515 taatttaccatctgtacatttttagaggacagtttagtggtgataaatacatttatattttctgctcttaatctcctcttcccactccccttgctggcctctagcaaccaccaatttactttttatcttcatgagatccacttttttactgcccacatatgagtgacaacttgtggcatttgtctttctgtgctt i panTro5.chrY C 0 C 0 s panPan2.chr11 88573551 195 + 134183262 TAATTTACCATCTGTACATTTTTAGAGGCCAGTTTAGTGGTGATAAATACATTTATGTTTGcttttcttcatctcctcctcccactccccttgctggcctctagcaaccaccaatttactttctatcttcctgagatccactttttcactggccacatataagtgacaacatgcgatatttgcctttctgtgctt i panPan2.chr11 C 0 C 0 s macNem1.NW_012010789v1 257308 195 - 11451906 TAATTTACCATCTGTACATTTTTAGAGGACAGTTTAGTGGTGATAAATACATTTAAATTTGcttctcttcgtctcgtcttcccactccccttgctggcctctagcaaccaccaatttactttctatcttcatgagatccacttttttaccacccacatatgagtgacaacatgcgatatttgcttttctgtgctt i macNem1.NW_012010789v1 I 2 C 0 s chlSab2.chr1 81234555 195 + 126035930 taATTTACCTTCTGTACATTTTTAGAGGACAGCTTAGTGGTGATAAATACATTTAAATTTGcttctcttcatctcgtcttcccactccccttgctggcctctagcaaccaccaatttactttctatcttcatgagatccacttttttaccacccacatatgagtgacaacatgcgatatttgcctttctgtgctt i chlSab2.chr1 I 36 I 1395 s colAng1.NW_012116622v1 197857 186 + 3898586 taATTTACCATCTGTAAATTTTTAGAGGACAGTTTAGTGGTGATAAATACATTTAAATTTGCTT---------TCGTcttcccactccccttgctggcctctagcaaccaccaatttactttctatcttcatgagatccacttttttaccacccacatatgagtgacaacatgcgatatttacctttctgtgcct i colAng1.NW_012116622v1 I 12 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=583917.000000 s hg38.chr14_KI270725v1_random 67020 729 + 172810 ggctcattccacttaacataatggcctctgttcattacgttaagccaaatggccagcgccacctatgttgctgtgaatgacagaatttcattcttctttgtatctgagtagtattccattatgtatatatatgacttttaaaatctattcatttgttgatgagcacttacgttgattccatattttgtctattgtgaatagtgctgcagtacacatcggcatgtagatatgtctttgatacattaatttcctttattttggatatatatccagtaaagaaattgctgggccacatggtagttctatttttacttttttgaggaacctccatactgttctccatagtggctttattaatgtagattcccactaacagtgtactagtatttccctttctccacatccttgccagcatctgttattgcctgtctttttgaaacaagtcatttcaaccaaggtgagatgatattgcattgtgattttgatttgcatttctttgacgattagtgatattgaacattttttcatcttcctattggccatttgtatgtcttcttttgagaaaatatctgttcagatctttagcccattttt-----aaattgtatttatttatata--tttttaactattAtttttttagaagcaaggtcttgctttgtcacccaagctaaagggcagtagcataatcatagctcactgtaacctcaaactcctgggattaagaaatcctcct s panTro5.chrY 303272 728 + 26350515 ggttcattccacttaacataatggcctatgttcattacgttaagccaaatggccagcgccacctatgttgctgtgaatgacagaatatcattcttctttgtatctgagcagtattccattatgtatatatatgacttctaaaatctattcatttgttgaagagcacttacgttgattcaatattttgtctattgtgaatagtgctgcagtacacataggcatgtagatatgtctttgatacattaatttcctttattttggatatatatcccataaggaaattgctggaccacatggtagttctatttttacttttttgaggagcctccatactgttctccaaagtggctttattaatgtagattcccaccaacactgtactagtatttccctttctccacatccttgccaacatctgttactgcctgtctttttgaaacaagtcatttcaaccaaggtaagatgatattgcattgtgattttgatttgcatttctttgacgattagtgatattgaacatttttacatcttcttattggccatttgtttgtcttcttttgagaaaatatctgttaagatcgtttgcccattttt-----aaattgtatttatttatata--tttttaaCTAtt-ttttgttagaagcaaggactttctttgtcgcccaagctaaagatcagtagcctaatcatagctcactgtaacctgaaactcctgggattaagtattcatccc i panTro5.chrY C 0 C 0 s panPan2.chr11 88573746 730 + 134183262 agctcattccatttaacataatggcctatgttcattacgttaagcgaaatggccagcaccacttatgttgctgcaaatgacagaatttcattcttctttgtatctgagtagtattccatgatgtatatatatgacttttaaaatctgtttatttgttgatgaccacttatgttgattccatattttggctattgtgaatagtgctgcaataaacatgggcatgtagagatgtctttgatacattgatttcctttgttttggatatatatccagtagtgaaattgctggaccacatggtagctctagttttacttttttgaggaacctccatacagttctccatagtggcttcattaatgtagattcccaccaacagtgtactagtgttcccctttctccacatctttgccagcatctgttattgcctgtctttttgatacaagccatttcaaccaacgtgagctgatattgcattgtggttttgatttgcatttgcttgatgattagtgatattgaacattttttcatcttcctattggccttttgtatgtcttcttttgag-aaatatctgttcagatcttttgcccatttttttaaaaaattgtatttatttatata--tttttaaCTA---tttttttagaagcaaggtcttgctgtgtcacccaagataaagggcagtggcttaatcatagctcactgtaacctcaaactcctgggattaagaaatcctcct i panPan2.chr11 C 0 I 291 s macNem1.NW_012010789v1 257503 730 - 11451906 ggctcattccacgtgacataatgggctatgttgattacattaagcgaaatggccagcgccacctatgttgctacaaatgacagaatttcattcttctttttatctgagtagtattccattatgtatatatatgacttttaaaatatattcatttgttgatgagcacttatattgattccatattttggccattatgaatagtgctgcaataaacgtgggcatgtagagatgtcttttatatattgatgtcctttattttggacatatatccagtagtgaaatagctggaccacatggtagttctatttttacatctttgaggaacctccatactgttctccatagtggctttattaacgtagattcccaccaatggtgtactagtgttccccgttctccacatccttgccagcatctgttattgcctgtctttttgatataagtcatttcaaccaaggtgagatgatactgcattgtggttttgatttgcatttctctgatgattagtgatattgaacattttttcatcttcctattggccatttgtaggtcttcttttgag-aaatatctgttcagatcttttgcccattttt---taaaattgtatttatttatata--tttttaactattAtttttttagaagcaagatcttgctctgtcatccaggctaaaggacagtggcataatcatagctcactgtaaccttaaactcctgggattaagaaatcctcct i macNem1.NW_012010789v1 C 0 C 0 s colAng1.NW_012116622v1 198043 732 + 3898586 ggctcattccacataacataatggcctatgtttattacattaagtgaaatggccagtgccacctatgttgctacaaatgacagaatttcattcttctttgtatctgagtagtattccattatgtatatacatgacttttaaaatatattcatttgttgatgagcacctatattgattccatattttggctattatgaatagtgctgcaataaacatgggcatgtagagatgtctttgatacattgatttcctttattttggacatatatccagtagtgaaatagctggaccacatggtagttctatttttacttttttgaagaacttccatattgttctccatagtggctttattaacatagattcccaccaatggtgtactagtgttccccgttctccacatccttgccagcatctgttattgcttgtctttttgatacaagccatttcaaccaaggtgagatgatactgcactgtggttttgatttgcatttctttgatgattagtgatattgaacattttttcatcttcctattggccatttgtaggtcttcttttgag-aaatatctgttcagatcttttgcccattttt---taaAATTGTATTTATTTATATAtttttttaactattatttttttagaagcaagatcttgctctgtcacccaagctaaagggcagtggcataatcatagctcactgtaaccttaaactcctgggattaagaaatcctcct i colAng1.NW_012116622v1 C 0 I 307 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e chlSab2.chr1 81234750 1395 + 126035930 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=300.000000 s hg38.chr14_KI270725v1_random 67749 1 + 172810 g s panTro5.chrY 304000 1 + 26350515 g i panTro5.chrY C 0 C 0 s macNem1.NW_012010789v1 258233 1 - 11451906 g i macNem1.NW_012010789v1 C 0 I 293 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=8150.000000 s hg38.chr14_KI270725v1_random 67750 97 + 172810 accgggcgcggtggctcacgcctgtattcccagcactttgggaggccgaggcggacagatcacgaggttaggagatcaggaccatcctggctaacac s panTro5.chrY 304001 97 + 26350515 accgggcgcggtggctcacgcctgtattcccagcacgttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacac i panTro5.chrY C 0 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e gorGor5.CYUI01002012v1 19339 0 + 57002 C e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e macNem1.NW_012010789v1 258234 293 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=37192.000000 s hg38.chr14_KI270725v1_random 67847 148 + 172810 ggtgaaaccccgtctctactaaaaatacagtaaattagcctggcttggtgccgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacccctggggagcagagtctgcagtgagccgagatcgtgccact s panTro5.chrY 304098 148 + 26350515 ggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcttggtgccgggagcctgtagtcccagctactcaggaggctgaggcgggagaatggtgtgaaccccgggggagcagagcctgcagtgacccgagatcgcgccact i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 19339 147 + 57002 ggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcttggtgcc-ggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaaccctgggggagcagagcatgcagtgagccgagatcgcgccact i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2076482 512 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e macNem1.NW_012010789v1 258234 293 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=7250.000000 s hg38.chr14_KI270725v1_random 67995 16 + 172810 gcactccagcctggac s panTro5.chrY 304246 16 + 26350515 gcactccaacctgggc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 19486 16 + 57002 gcactccaacctgggc i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2076994 16 + 72422247 gcactccagcctacac i ponAbe2.chrUn I 512 I 543 e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e macNem1.NW_012010789v1 258234 293 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=113389.000000 s hg38.chr14_KI270725v1_random 68011 451 + 172810 gacagcgagactccatctcaaaaaaaaaaaaaaaaaaaa-------------------tcctcctacctcagcctcttcagtagcccatttttcaatcagattttttgttt----attattgagttgtttgagctccttatatattctacttgttaatcctttatcagatagatagtttgaaaatattttgtcccagtctgtggttggctcttcgctttgttgattgattcctttgcttgaggctttttagtttgatataatcccattgtctatttttgcttctgttgcctgtgcttccgaggtcttacgcaaaaaaatctttgcccagactaatgtcctggagcatttctcctatgctttcttttttcttttttctttttttttttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccatcatgccccgctaatttttttttttttttttt s panTro5.chrY 304262 470 + 26350515 aacagcgagactccatctcaaaaaaaaaaagaaaaaaaaaaagaaaaaaaaaaagaaatcctcctacctcagcctcttcagtagcccatttttcaatcagattttttgtttgtttattactgagttgtttgagttccttatatattctacttattaatcctttatcagatagatagtttgaaaatattttgtcccattctgtggtcggctcttcactttgttgattgtttcctttgcttgaggctttttagtttgatataatccctttgtctatttttgctttcgttgcctgtgcttccgaggtcttacgcaaaaaaatctttgcccagactaatgtcctggagcatttctcctatgctttctttttttgtttct-ttttttcttttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcgcccaccatcatgccccgcta---ttttttttttttgttt i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 19502 452 + 57002 gacagcgagactccatctcaaaaaaaaaaaaaaaaa----------------------TCCTCCTACCTCAGCCTCTTCAGTAgtccatttttcaatcagattttttgtttgtttattattgagttgcttgagctccttatatattctacttgttaatcctttatcagatacatagtttgaaaatattttgtcccattctgtggttgcctcttcactttattgattgtttcctttgcttgaggctttttagtttgatataatcccattgtctatttttgcctttgttgcctgtgcttccgaggtcttacgcaaaaaaatctttgcccagactaatgtcctggagcatttctcctatgctttcttttttctttcttttttttttttttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccatcatgccccgctaatttttttttttttttttt i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2077010 543 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e macNem1.NW_012010789v1 258234 293 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=546.000000 s hg38.chr14_KI270725v1_random 68462 1 + 172810 t s panTro5.chrY 304732 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 19954 1 + 57002 t i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2077553 1 + 72422247 t i ponAbe2.chrUn I 543 I 13412 e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e macNem1.NW_012010789v1 258234 293 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=33798.000000 s hg38.chr14_KI270725v1_random 68463 145 + 172810 gtatttttagtagagacggagtttcaccgtgttagccaggatggtcctgatctcctaacctcgtgatctgtccgcctcggcctcccaaagtgctgggaatacaggcgtgagccaccacgcct-ggcctttcctatgcttttttatt s panTro5.chrY 304733 142 + 26350515 gtatttttagtagagacgaagtttcaccgtgttagccagggtggtctcgatcttctgaccttgtgatccggccgccttggcctcccaaagtgctgagattacagatgagagccaccgtgccc-ggcctttcctatgctttttt--- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 19955 146 + 57002 gtatttttagtagagacggagtttcaccgtgttagccagggtggtctcgatctcctgaccttgtgatccgcccgccttggcctcccaaagtgctgagattacagacgtgagccaccgcgcccagGCCtttcctatgcttttttttt i gorGor5.CYUI01002012v1 C 0 I 1 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 198775 307 + 3898586 I e chlSab2.chr1 81234750 1395 + 126035930 I e macNem1.NW_012010789v1 258234 293 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I e panPan2.chr11 88574476 291 + 134183262 I a score=10973.000000 s hg38.chr14_KI270725v1_random 68608 10 + 172810 ttttactagc s panTro5.chrY 304875 10 + 26350515 ttttactagc i panTro5.chrY C 0 C 0 s panPan2.chr11 88574767 10 + 134183262 ttttagtagc i panPan2.chr11 I 291 C 0 s gorGor5.CYUI01002012v1 20102 10 + 57002 ttttactagc i gorGor5.CYUI01002012v1 I 1 C 0 s macNem1.NW_012010789v1 258527 10 - 11451906 ttttagtaac i macNem1.NW_012010789v1 I 293 C 0 s chlSab2.chr1 81236145 10 + 126035930 ttttagtaac i chlSab2.chr1 I 1395 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e colAng1.NW_012116622v1 198775 307 + 3898586 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=839790.000000 s hg38.chr14_KI270725v1_random 68618 487 + 172810 ttcatagtttgaggtctcagattcaagtctttaatccatttttatttgatttgatttttgtgtatggtaagatgggtttaattttatccttctgcatacagttattcagttttcccaggatcatttattgaaaagactgttgttttcccagtgtatgttcttgatgcctttgtcagagatgagttgtgtgtaaatgtgtacatt--tgtctgcagtctctattctgttccactgtcctatgtgtctgtttttacgccagtaGAAATATATTGGCAATAATTAGTACAGAAAAGCTGAAACAATGAAATGACAAAAGTGATTTATACTGATATAATTCCTTATTCTCACTAAATGCAATAGCATACAGCTAG-GAAAACAATGTAGTGCACACGGTATTAAAATAGAACACAATTCAATATACACAGTGCTCACAGTGGCCATCGTTAGAGTGTTgacg---gggatgcagtcagcaaaagttgtacaggtgac s panTro5.chrY 304885 490 + 26350515 ttcatagtttcaggtctcagattcaagtctttaatccatttttatttgatttggtttttgtgtatggtaagatgggtttaattttttccttctgcatatggttattcagttttcccaggatcatttattgaaaagactgttgttttcccagtgtatgttcttgatgcctttgtcagagatgagttgtttgtaaatgtgtagatt--tgtctgcgatctctattctgttccactgtcctatgtgtctgtttttatgccagAAGAAATATATTGGCAATAATTAGTATAGAAAAGCTGAAACAATGAAATGACAAAAGTGAATTGTACTGATATAATTCATTATGCTCACTAAATGCAATAGCATACAGCTAG-GAAAACAATGTAGTGCACATGGTATTAAAATACAACACAATTCAATATACACAGTGCTCACAGTGGCCATTGTTAGAGTGTTGAAGAAGGGGATGTAGTCAGCAAAAGTTGTACAGGTGAC i panTro5.chrY C 0 C 0 s panPan2.chr11 88574777 493 + 134183262 ttcatagtttcaggtcttagattcaagtctttaatctatttttattcgatttgatttttgtatatggtaagaggggtttaattttatccttcttcatttagttattcagttttcccaggattatttattgaaaagactgttctttgcccagtgtatgttcttgatgcctttgtcagaggtgagttgtttgtaaatgtgtagatttatgtctgagatctccattctgctccattgtcctgtgtgtctgtttttatgccagtaGAAATATATTGGCAATAATTAGTACAGAAAAGCTGAAACAATGAAATGACAAAAGTGAATTATACTGATATAATTCATTATGCTCACTAAATGCAATAGCATGCAGCTAGTAAAAACAATGTAGTGCACACAGTATTAAAATAAAACACAATTCAATATACACAGTGCCCACAGTGGCCATCATTAGAGTGTTGAAGAAGGGGATGTAGTCAGCAAAAGTTGTACAGGTGAC i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 20112 490 + 57002 ttcatagtttcaggtctcagattcaagtctttaatcaatttttatttgatatgatttttgtgtatggtgagatgggtttaattttatccttctgcatatagttattcagttttcccaggatcatttattgaaaagactgttgttttcccagtgtatgttcttgatgcctttgtcagagatgagttgtttgtaaatgtgtagatt--tgtctgcgatctctattctgttccactgtcctatgtgtctgtttttatgccagtaGAAATATATTGGCAATAATTAGTACAGAAAAGCTGAAACAATGAAATGACAAAAGTGAATTATACTGATATAATTCATTATGCTCACTAAATGCAATAGCATACAGCTAG-GAAAACAATGTAGTGCACACGGTATTAAAATACAACACAATTCAATATACACAGTGCTCACAGTGGCCATCGTTAGAGTGTTGAAGAAGGGGATGTAGTCAGCAAAAGTTGTACAGGTGAC i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 258537 484 - 11451906 ttcatagtttcaggtcttagattcaagtctttaatccatctttatttgatttgatttttgtgtatggtaagaggggtttaattttatccatctgcata----tattcagttttcccaggatcatttattgaaaagactgtt-cttgaccagtgtatgttcttgatgcctttgtcagatataagt----tgtaaatgtgtagatttatgtctgtgatctctattctgttccattgtcctatgtgtctgtttttatgccagtaGAAATACATTTGCAATAATTAGTACAGAAAAGCTGAAACAATGAAATGACAAAAGCGAATTATACTGATATAATTCATGATGCTCACTAAATGCAATAGCATACAGCTAGGAAAAACAATGTAGTGCACATAGTATTAAAATAAAACACAACTCAATACGCACAGTGCTCACAGTGGCCATCATTAGAGTGTTGAAGAAGGGGATGTAGTCAGCTAAAGTTGCACAGGTGAC i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81236155 488 + 126035930 ttcatagtttcaggtcttagattcaagtctttaatccatctttatttgatttgatttttgtgtatggtaagaggggtttaattttacccatctgcatatagttattcagttttcccaggatcatttattgaaaagactgtt-cttgactagtgtatgttcttgatgcctttgtcagagataagt----tgtaaatgtgtagatttatgtctgtgatctctattctgttccattgtcctatgtgtctgtttttatgccagtaGAAATACATTTGCAATAATTAGTGCAGAAAAGTTGAAACAATGAAATGACAAAAGTGAATTATACTGATATAATTCATGATGCTCACTAAATGCAATAGCATACAGCTAGGAAAAACAATGTAGTGCACACAGTATTGAAATAAAACACAACTCAATACACACAGTGCTCACAGTGGCCATCATTAGAGTGTTGAAGAAGGGGATATAGTCAGCTAAAGTTGTACAGGTGAC i chlSab2.chr1 C 0 I 5 s colAng1.NW_012116622v1 199082 485 + 3898586 ttcatagtttcaggtcttagattcaagtctttaatccatttttatttgatttgatttttgtgtatggtaagaggggtttaattttatccatctgcatatagttattcagttttcccaggatcatttattgaaaagactgtt-cttgaccagtgtatgttcttgatgccttcgtcagatatcagt----tgtaaatgtgtagatttatgtctgtgatctctattctgttccattgtcctaggtgtctgtttttatgccagtaGAAATGCATTTGCAATAATTAGTACAGAAAAGCTGAAACAATGAAATGACAAAAGTGAATTATACTGATATAATTC---ATGCTCACTAAATGCAATAGCATACAGCTAGGAAAAACAATGTAGTGCACACAGTATTAAAATAAAACACAACTCAATACACACAGTGCTCACAGTGGCCACCATTAGAGTGTTGAAGAAGGGGATGTAGTCAGCTAAAGTTGCACAGGTGAC i colAng1.NW_012116622v1 I 307 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=23610.000000 s hg38.chr14_KI270725v1_random 69105 17 + 172810 ttcaaaagtaatcataa s panTro5.chrY 305375 17 + 26350515 TTCAAAAGTAATCATAA i panTro5.chrY C 0 C 0 s panPan2.chr11 88575270 17 + 134183262 TTCAAAAGTAATCATAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 20602 17 + 57002 TTCAAAAGTAATCATAA i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 259021 17 - 11451906 TTCAAAAGTAATCATAA i macNem1.NW_012010789v1 C 0 C 0 s colAng1.NW_012116622v1 199567 17 + 3898586 TTCAAAAGTAATCATAA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e chlSab2.chr1 81236643 5 + 126035930 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=16356.000000 s hg38.chr14_KI270725v1_random 69122 9 + 172810 gcacttatg s panTro5.chrY 305392 9 + 26350515 GCACTTATG i panTro5.chrY C 0 C 0 s panPan2.chr11 88575287 9 + 134183262 GCACTTATG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 20619 9 + 57002 GCACTTATG i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 259038 9 - 11451906 GTACTTATG i macNem1.NW_012010789v1 C 0 I 1 s chlSab2.chr1 81236648 9 + 126035930 GTACTTATG i chlSab2.chr1 I 5 C 0 s colAng1.NW_012116622v1 199584 9 + 3898586 GTACTTATG i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=140087.000000 s hg38.chr14_KI270725v1_random 69131 123 + 172810 attacttttggcttaatttcttaaaccaagactggagacacaggtgttcattatgtgcttattatacatataca--ataaatattttataaatatattgtttctatTCAGTATTTAATAAAGTAA s panTro5.chrY 305401 123 + 26350515 GTTACTTTTGGCTTAATTTCTTAAACGAAGACTGGAGACACAGGTGTTCATTTTTTGCTtattatatatataaa--ataaatattttataaatatGTTGTTTCTATTCAGTATTTAATAAAGTAA i panTro5.chrY C 0 C 0 s panPan2.chr11 88575296 125 + 134183262 ATTACTTTTGGCTTAATTTCTTAAACCAAGACTGGAGACACAAGTGTTCATTGTGTGCTTATTCtatatatatattataaatattttataaatatattGTTTCTATTCAGTATTTAATAAAGTAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 20628 123 + 57002 ATTACTTTTGGCTTAATTTCTTAAACCAAGACTGGAGACACAGGTGTTCATTATGTGCTtattatatatataaa--ataaatattttataaatatatTGTTTCTGTTCAGTATTTAATAAAGTAA i gorGor5.CYUI01002012v1 C 0 C 0 s chlSab2.chr1 81236657 119 + 126035930 ATTACTTTTGGCTTAATTTCTTAAACCAAGACCGGAGGTACAGGTGTTCATTATGTGCTTATTTTATATATATA------ATATTTTATAAGTATATTGTTTCTCTTCAGTATTTAATAAATTAA i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 199593 121 + 3898586 ATTACTTTTGGCTTAA-TTCTTAAACCAAGACTGGAGACACAGATGTTCATTATGTGCTTATTTtatatatata---tataaaatttataagtatatTGTTTCTATTCGGTATTTAATAAAGCAA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e macNem1.NW_012010789v1 259047 1 - 11451906 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=187809.000000 s hg38.chr14_KI270725v1_random 69254 109 + 172810 ATCAATAGACAAGGTTAAAAATCAATGTACACATATTTCAAATA-TTTTTTGCTCCAAGTTATATAAAC--ATTGC----------ATAGTTATTGCCCTGGgcctggcaaggtgactcaca s panTro5.chrY 305524 109 + 26350515 ATCAATAGAAAAGGTTAAAAAGCAATGCACACATATTTCAAATA-TTTTTTGCTCCAAGTTATATAAAC--ATTGC----------ATAGTTATTGCCCTAGgcctggcaaggtgacccaca i panTro5.chrY C 0 C 0 s panPan2.chr11 88575421 110 + 134183262 ATCAATAGAAAAGGTTAAAAAGCAATGCATACATATTTCAAATATTTTTTTGCTCCAAATTATATAAGC--ATTGC----------ATAGTTATTGCCCTGGgccaggtaaggtggctcaca i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 20751 109 + 57002 ATCAATAGAAAAGGTTAAAAAGCAATGCACACATATTTCAAATA-TTTTTTGCTCCAAATTATATAAAC--ATTGC----------ATAGTTATTGCCCTGGgcctggcaaggtgactcaca i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012010789v1 259048 109 - 11451906 ATCAATAGAAAAGGTTAAAAAGCAATGCACACATATTTCAAATG-TTTTTTGCTCCAAATTATATAAAC--ATTGC----------ATAGTTATTGCCCTGGgcctggcaaggtagctcaca i macNem1.NW_012010789v1 I 1 C 0 s chlSab2.chr1 81236776 109 + 126035930 ATCAATAGAAAAGGTTGAAAAGCAATGCACACATATTTCAAATG-TTTTTTGCTCCAAATTACATAAAC--ATTGC----------ATAGTTATTGCCCTGGgcctggcaaggtagctgaca i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 199714 121 + 3898586 ATCAATAGAAAAGGTTAAAAAGCAATGCACACATATTTCAAATA-TTTTTTGCTCCAAATTATATAAACAAATTATATAAAAACAAATAGTTATTGCCCTGGgcctggcaaggtggctcaca i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=394046.000000 s hg38.chr14_KI270725v1_random 69363 142 + 172810 cctctcatcctagcactttaggagactgaggcaggaggatagcttcagccccagaggtaaaggctgcagtgagccttaattgcactactgccctccagcctaggtgacagagcaagatgctgtctgaagataagaataaaaa s panTro5.chrY 305633 142 + 26350515 cctcttatcctagcactttaggagactgaggcaggaggatagcttcagccccagaggtcaaggctgcagtgagccttaattccactactgcactccagcctaggtgacagagcaagatgctgtctgatgataaaaataaaaa i panTro5.chrY C 0 C 0 s panPan2.chr11 88575531 142 + 134183262 cctgtaatcctagcactttaggaggctgaggcaggaagagagcttcagccccagaggtcaaggctgcagtgagctgtaattgcactactgcactccagcctaggtgacagagcaagacgctgtctcaagataaaaagaaaaa i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 20860 142 + 57002 cctctcatcctagcactttaggagactgaggcaggaggatagcttcagccccagaggtcaaggctgcagtgagccttaattgcactactgcactccagcctaggtgacagagcaagatgctgtctgaagataaaaataaaaa i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr14 82546508 140 + 127894412 cctctaatcctagcactttaggaggctgaggcaggaggatagcttcagccagagaggtcaaggctgaagggtgccgtaatctcactactgcactccagccta-gtgacagagcaagac-ctgtctcaagataaaaataaaaa i rheMac8.chr14 N 0 C 0 s macFas5.chr14 85834523 141 + 130733371 cctctaatcctagcactttaggaggctgaggcaggaggatagcttcagccagagaggtcaaggctgaagggtgccgtaatctcactactgcactccagccta-gtgacagagcaagatgctgtctcaagataaaaataaaaa i macFas5.chr14 N 0 C 0 s macNem1.NW_012010789v1 259157 141 - 11451906 cctctaatcctagcactttaggaggctgaggcaggaggatagcttcagccagagaggtcaaggctgaagggtgctgtaatctcactactgcactccagccta-gtgacagagcaagacgctgtctcaagataaaaataaaaa i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81236885 141 + 126035930 cctctaatcctagcactttaggaggctgagggagggggatagcttcaggcagagaggtcaaggctcaagggtgccgtaatcgcactactgcactccagccta-gtgacagagcaagacgctgtctcaagataaaaataaaaa i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 199835 141 + 3898586 cctgtaatcctagaactttaggaggctaaggcaggaggatagcttcagcccgagaggtcaaggctgaaggg-accataatcgcactgctgcactccagcctaggtgacagagcaagacactgtctcaagataaaaatataaa i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e rhiRox1.KN297695v1 39369 5676 + 134106 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=5398.000000 s hg38.chr14_KI270725v1_random 69505 2 + 172810 ga s panTro5.chrY 305775 2 + 26350515 ta i panTro5.chrY C 0 C 0 s panPan2.chr11 88575673 2 + 134183262 TA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 21002 2 + 57002 TA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr14 82546648 2 + 127894412 ta i rheMac8.chr14 C 0 I 10 s macFas5.chr14 85834664 2 + 130733371 ta i macFas5.chr14 C 0 I 10 s macNem1.NW_012010789v1 259298 2 - 11451906 ta i macNem1.NW_012010789v1 C 0 I 14 s chlSab2.chr1 81237026 2 + 126035930 ta i chlSab2.chr1 C 0 I 14 s colAng1.NW_012116622v1 199976 1 + 3898586 -a i colAng1.NW_012116622v1 C 0 I 13 s rhiRox1.KN297695v1 45045 1 + 134106 -a i rhiRox1.KN297695v1 I 5676 N 0 s rhiBie1.NW_016819572v1 172852 1 - 482552 -a i rhiBie1.NW_016819572v1 N 0 N 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=2040891.000000 s hg38.chr14_KI270725v1_random 69507 693 + 172810 aGTTGATAAATAAATA----TATGTTTATATATTAACTGATTTTATTAAC------------------------------------------------------tatatatatatatatatatatatatataGTTGTTGTCTTAGTCTATAGGCAATCTTACAGTGCTTAAGACTTTGATACTGAGAACAGATCTCCTAGGTATATGCTGTGTTTCTGGGGTGACATGATGCTCTCATCTGGCCTCCGTGAGCCTAATTCTATCTTACATTTACCCCACTCTT-CAACAACAACTTGGGGAGGTGTCCCTAAACATTCCTAGGTAAACCCAAACCTGTGGCCCTCAACACATTTCTAGGTAAAGCAAGCTCCTGACA-TATCTGTGGATATCCTCTCATTGGAAGAAGGGGGAAGAGACCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAATTTTATTTTGAG-AAAGAGACACACAGTAAATAAAATTTCTAAAAAACTATGAACTTTCAAGCATTCTCATGCTAAATCTAGCCCTGCTCACATGCCAGGGAAATAAAAATGTAATCTGTTTCTCAACCTGACCAGGATGCTACAGTAATTAAAAATAAACTCAATCCCTGGATCCCTACCAAAGGGTCATTTCATATGGATCAAAG-----------------TTCTGGTAAAATTATTTGTCTGGAAATAGACTAATTCTCCAAAATATAATTGAAAT---AGCCTCTGGAAAGGGCCAAATACGACTCTTA s panTro5.chrY 305777 752 + 26350515 agttaataaataaataa--ataTGTTTATATATTAACTGATTTTATTAACACtatatatatattatatatatatattttatatatatatatatatatatatatatatatatatatatatatatatatatataGTTGTTGTCTTGGTCTATAGGCAATCTTACAGTGCTTAAGACTTTGATACTGAGAACAGATCTCCTAGGTATATGCTGTGTTTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGGCTAATTCTATCTTACATTTATCCCACTCTT-CAACAACAACTTGGGGAGGTGTCCCTAAACATTCCTAGGTGAACCCAAACCTGTGGCCCTCAACACATTTCTAGGTAAAGCAAGCTCCTGACA-TATCTGTGGATATCCTCTCATTGGAAGAAGGCGGAAGAGATCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAATTTTATTTTGAT-AAAGAGACACACAGTAAATAAAATTTCTAAAAAACTATAAACTTTCAAGCATTCTCACGCTAAATCTACCCCTGCTCACATGCCAGGGAAATATAAAGGTAATCTGTTTCTCAACCTGACCAGGATGCTACAGTAATTAAAAATAAACTCAATTCCTGGATCCCTACCAAAGGGACATTTCATATGGATCAAAG-----------------TTCTGGAAAAATTATTTGTCTGGAAATAGACTAATTCTCCAAAATATAATTGAAATAACAGCCTCTGGAAAGGGCCAAATATGACTCTTA i panTro5.chrY C 0 C 0 s panPan2.chr11 88575675 730 + 134183262 AGTTAataaataaataaatatatgtgtatatattaactgattttattaag----------------------------------------tacatatatatagtta-atatatataactatacatatatgtaGTTACTGTCTTGGTCTATAGTCAATCTTACAGTGCTTAAGACATTGATACTGAGAACAGTTCTCCTAGGTATATGCTGTGTTTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGCCTAATTCTAACTTACATTTACCCCACTCTT-CAACAACAACTTGGGAAGGTGTCCCTAAACGTTCCTAGGTGAACCCAAACCTGTGGCCCTCAACACATTTCTAGGTAAAGCAAGCTCCTGACA-TATCTGTGGATATCCTCTCATTAGAAGAAGGGGGAAGAGACCATCTCAAAGTAATTCATTTAATATAGCTTTGCAGCATTAATTTTATTTTGAC-AAAGAGACACAAAGTAAATAAAATTTCTAAAATACTATAAACTTTCAAGCATTTTCACACTAAGTCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTGATCTGTTTCTCAACCTGACCAAGATGCTACAGTAATTAAAAATAAACTCAATCCCTGGATCTCTACCAAAGGGTCTTTTCATATGGATCAAAGTGTATCTACTCATCACATTCTGGAAAAATTATTTGTCTGGAAATAGACAAATTATCCAAAATATAATAGAAATAACAGCCTCTGGAAAGGGCCAAATAAGACTCTTA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 21004 681 + 57002 AGTTAataaataaata----tatgtttatatattaactgattttattaac--------------------------------------------------------------------tatatatatatataGTTGTTGTCTTGGTCTATAGGCAATCTTACAGTGCTTAAGACTTTGATACTGAGAACAGATCTCCTAGGTATATGCTGTGTTTCTGGGGTGACATGATGCTCTCATCTGGCCTCCGTGAGCCTAATTCTATCTTACATTTACCCCACTCTT-CAACAACAACTTGGGGAGGTGTCCCTAAACATTCCCAGGTGAACCCAAACCTGTGGCCCTCAACACATTTCTAGGTAAAGCAAGCTCCTGACA-TATCTGTGGATATCCTCTCATTGGAAGAAGG-GGAAGAGACCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAATTTTATTTTGAT-AAAGAGACACACAGTAAATAAAATTTCTAAAAAACTATAAACTTTCAAGCATTCTCACGCTAAATCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTAATCTGTTTCTCAACCTGACCAGGATGCTACAGTAATTAAAAATAAACTCAATCCCTGGATCCCTACCAAAGGGTCATTTCATATGGATCAAAG-----------------TTCTGGAAAAATTATTTGTCTGGAAATAGACTAATTCTCCAAAATATAATTGAAATAACAGCCTCTGGAAAGGGCCAAATACGACTCTTA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr14 82546660 696 + 127894412 ----Aataaataaataaatgtatg-ttatatattaactgatttcattaac----------------------------------------------------------------------tatatatatataGTTGTTGTCTTGGTCTATAGTCAGTCTTACAGTGCTTAAGACATTGATACTGAGAACAGTTCTCCTAGGTATATGCTATGTCTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGCTTAATTCTCTCTTACATTTACCCCACTCTT-CAACAACAACTTGGGGAGGTTTCCCTAAATGTTCCTAGGTGAACCCAAACCTATGACCCTCAACACTTTTCTAGGTAAAGCAAGCTCCTGACATTATCTGTGGATATCCTCTCATTAGAAGAAGAGGAAAGAGACCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAAATTTATTTTGAT-AAAGAGATACAAAGTAAA-ACAATTTCTTAAAAACTATAAACTTTCAAGCATTCTCACACTAAATCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTGATCTGTTTCTCAACCTGACCAGGATGCTACAGTAATTAAAAATAAATTCAATCCCTGGATCCCTACCAAAGGGTGATTTCATATGGCTCAAAGTGTATCTAGTCATCACATTCTGGAAAAATTATTTGTCTGGAAATAGACAAATTATCCAAAATATAATTGAAATAATAGCCTCTGGAAAGGGCCAAATATGACTCTTA i rheMac8.chr14 I 10 C 0 s macFas5.chr14 85834676 697 + 130733371 ----Aataaataaataaatgtatgtttatatattaactgatttcattaac----------------------------------------------------------------------tatatatatataGTTGTTGTCTTGGTCTATAGTCAGTCTTACAGTGCTTAAGACATTGATACTGAGAACAGTTCTCCTAGGTATATGCTATGTCTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGCTTAATTCTCTCTTACATTTACCCCACTCTT-CAACAACAACTTGGGGAGGTTTCCCTAAATGTTCCTAGGTGAACCCAAACCTATGACCCTCAACACTTTTCTAGGTAAAGCAAGCTCCTGACATTATCTGTGGATATCCTCTCATTAGAAGAAGAGGAAAGAGACCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAAATTTATTTTGAT-AAAGAGATACAAAGTAAA-AAAATTTCTTAAAAACTATAAACTTTCAAGCATTCTCACACTAAATCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTGATCTGTTTCTCAACCTCACCAGGATGCTACAGTAATTAAAAATAAATTCAATCCCTGGATCCCTACCAAAGGGTGATTTCATATGGCTCAAAGTGTATCTAGTCATCACATTCTGGAAAAATTATTTGTCTGGAAATAGACAAATTATCCAAAATATAATTGAAATAATAGCCTCTGGAAAGGGCCAAATATGACTCTTA i macFas5.chr14 I 10 C 0 s macNem1.NW_012010789v1 259314 698 - 11451906 ----aataaataaataaatGTATGTTTATATATTAACTGATTTCATTAAC----------------------------------------------------------------------TATATGTATATAGTTGTTGTCTTGGTCTATAGTCAGTCTTACAGTGCTTAAGACATTGGTACTGAGAACAGTTCTCCTAGGTATATGCTATGTCTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGCTTTATTCTCTCTTACATTTACCCCACTCTT-CAACAACAACTTGGGGAGGTTTCCCTAAATGTTCCTAGGTGAACCCAAACCTATGACCCTCAACACTTTTCTAGGTAAAGCAAGCTCCTGACATTATCTGTGGATATCCTCTCATTAGAAGAAGAGGAAAGAGACCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAAATTTATTTTGATAAAAGAGATACAAAGTAAA-AAAATTTCTTAAAAACTATAAACTTTCAAGCATTCTCACACTAAATCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTGATCTGTTTCTCAACCTGACCAGGATGCTACAGTAATTAAAAATAAATTCAATCCCTGGATCCCTACCAAAGGGTGATTTCATATGGCTCAAAGTGTATCTAGTCATCACATTCTGGAAAAATTATTTGTCTGGAAATAGACAAATTATCCAAAATATAATTGAAATAATAGCCTCTGGAAAGGGCCAAATATGACTCTTA i macNem1.NW_012010789v1 I 14 C 0 s chlSab2.chr1 81237042 703 + 126035930 ----aataaataaataaatgtatgtttatatattaactgattttattaac----------------------------------------------------------------tctatatctatatatataGTTGTTGTCTTGGTCTATAGTCAATCTTACAGTGCTTAAGACATTGATACTGAGAACAGTTCTCCTAGGTATATGCTATGTCTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGCTTAATTCTCTCTTACATTTACCCCACTCTT-CAACAACAACTTGGGGAGGTTTCCCTAAATGTTCCTAGGTGAACCCAAACCTATGGCCCTCAACACTTTTCTGGGTAAAGCAAGCTCCTGACATTATCTGTGGATATCCTCTCATTAGAAGAAGGGGAAAGAGACCATCTCAAAATAATTCATTTACTATAGCTTTTCTGCATTAATTTTATTTTGAT-AAAGAGATACAAAGTAAA-AAAATTTCTTAAAAACTATAAACTTTCAAGCATTCTCACACTAAATCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTGATCTGTTTCTCAACCTGACCAGGATGCTACAGTAATTAAAAATAAATTCAATCCGTGGATCCCTACCAAAGGGTGATTTCATATGGATCAAAGTGTATCTAGTCATCACATTCTGGAAAAATTATTTGTCTGGAAATAGACAAATTATCCAAAATATAATTGAAATAATAGCCTCTGGAAAGGGCCAAATATGACTCTTA i chlSab2.chr1 I 14 C 0 s colAng1.NW_012116622v1 199990 704 + 3898586 ----aataaatcaataaatGTATGTTTATATATTAACTGATTTTATTAAC----------------------------------------------------------------TATATATCTATATATATAGTTGTTGTCTTGATCTATAATCAATCTTACAGTGCATAAGGCATTGATACTGAGAACAGTTCTCCTAGGTATATGCTGTGTTTCTGGGGTGACATGATGCTCTCATCTGGCCTCTGTGAGCTTAATTCTATCTTACATTTACCCCACTCTTCCAACAACAACTTGGGGAGGTTTTCCTAAATGTTCCTAGGTGAACTCAAACCTATGGCCCTCAACACTTTTCTAGGTAAAGCAAACTCCTGACATTATTTGTGGATATCCTCTCATTAGAAGAAGGGGAAAGAGACCATCTCAAAATAATTCATTTAATATAGCTTTTCAGCATTAATTTTATTTTGAT-AAAGAGATACAGAGTAAATAAAATTTCTTAAAAACTATAAACTTTCAAGCATTCTCACACTAAATCTAGCCCTGCTCACATGCCAGGGAAATATAAAGGTGATCTGTTTCTCAACCTCACCAGGATGCTACAGTAATTAAAAATAAATTCAATCCCTGGATCCCTACCAAAGGGTGATTTCATATGGATCAAAGTGTATCTAGTCATCACATTCTGG-AAAATTATTTCTCTGGAAATAGACAAATTATCCAAAATATAATTGAAATAACAGCCTCTGGAAAGGGCCAAATATGACTCTTA i colAng1.NW_012116622v1 I 13 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 28712 2330 + 112108 I a score=9109217.000000 s hg38.chr14_KI270725v1_random 70200 2466 + 172810 ATGATACAACAGGTAAATATAGGTCTGATGTTCATTCCGTGTGGACAACAATAGCAGCCATTCCCACAAATGGCTCATTTGTGGGAAGTAAACACTACTTTTGCAGAATCTTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTCCATGGTAATGTGATCACTATGTACCCAACAATGGCTCTTTCTTCCTAACGTCAATGCAGATGTTATTTTCACCTTAACTATTATCATTGCTGTTTCTAACCACAT-AAAAGTGTATCCTTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCATTTAAATGTAAAAACAGAAAACGTATGATGTGTTGATTTACTGTTTTATACTCC-TAACGCATGAAGAGAAGATCCTTTTATTCATTGCctatacttttatttctaaactttctgtaacactttatcttatatccagcatagaactgagatttgctttttgatttaatctgacaata--tttttcctctaata--agagtcaag-ccacttacttttaatgat-aaattgtgtttgtttatattttgattgccgtatattatgctatgatttagatgcacatatctgtcttttgctgtcttgtttgtttttattgcttttgttttgatgttgtgatatttggaagagttaaacttttattctgatggctaccttatgtaatttcataaaatcatctctttctttagacagtagcgaatgtctctaaactaagaacaatggtattagctgtattctctttcttgtcctcccTACGTGATTTTTCATCCCACAATTTGATTTAATCATATTAACTTTGTTTCCCCTGGTGCCATTAAGTATGCTTACATTTctataaacaatatcctttgactcccaggcattacagatgagcagtcagtaaaatcattctgaggaatgctttctctttccttttcttccatttttcttagttgtatcatttctatattgccagagcacctacagttgcatttctttctgtcagctttatccagcatttgtttttgtcttttatttgaagttaaatatattccttgttcactacAACACTGGGGGAAGGAAGGTTTCTGTTGTCATTGTTGTGCTTGTACAGTTGTTTATTTAAAAACATTGGCGA----AAACAAAAACTGTATGTAGATGGAGTGGAGATAAGACAGCAAATGAGAGAGACTGATGATGAGTGTGCCTATTCTAGACTGGGAGGCGTGCTACACTGAGTAGTGTCT-CAAGGCCACAGGAAAGGATGGTTGATTGTGAGCAGGTGGACTTTCCACTGGAGGAGAGAAGTCCTGCGCTCAACAACCTGTGCAGAACCAGAAACTGGTAATGCTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCGTTTAGCACCTAGTTACCTAGAAAATATTAGCAACTATTTGCTGAGCATCTATCAGTCTGTCTGTAGCATGGAAGACCTGAGTACAGGGGAAACTGGATTAGTAACAGTGGGTCAGAAAATTATATAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTGGTATTTCCAGAACTAGAAGGTAAAGAAATTATTTGTGCTTGAACTTGCAGAAAACTGCCTTTTCCCttcttctcttgcatcttaacctggagctt--ccttttcttgagcctcagtgtgcttcccaactcaatttatagttgacttcctgcagtttctctttaggacagggctttattttgggggtggttaatttgtagggttcataggaaacagaccactcacagcacctgctttttgccatcctcactctcagctatgagttgaggcccaggaagccttctgccagcctcagctgctgttctcagattaatctgctgagttcttttcgcctagtaagaatctctgaatttaggaacatagatgttagcgcttgtatttctaggttttccagttcccagggccattaaacatttt-----ttt--ctttcctttccttcttccaaaaaaattggtgattcgcctggttccctctggtttaacctcacaaaaggtccatgatgacaccctgttacattgttttgtcatagttaataccttgttatcccagttgctcagtcag-ttttgtgagagattcagggatattaataaaactgtgctgctgcTTCTACTAACACCTTGCATAAAAGTCCTATTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTGTAATTTTTATTCAAAGTTTTTCAACAGAGATCCAGAAAAGACCCTCATTATATTTTTAGTTTTGTGCATTGCAACACTTTTTAGTGAAAAAAAA------------AATACATGAGAACAACACAAGTGATTTTAAAAGAATAAACCTACAATCCATTAATTATAAAATGAAATACTATGCAGGTGTTAAGAATGAGGAAATCAATAAGAACTTGTGTGGGGTAACTATAAACTT s panTro5.chrY 306529 2462 + 26350515 ATGATACAACAGCTAAATATAGGTCTGATGCTCATTCTGTGTGGACAACAATAGCAGCCATTCCCACAAATGGCAGATTTGGGGGAAGTAAACACTACTTTTGCAGAATCTTACATGATTTCCGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTCCATGGTAATGTGATCACTATGTACCCAACAATGGCTCTTTCTTCCTAGTGTCATTGCAGATGATATTTTCATCTTAACTATTATCATTGCTGTTTCTAACCACAT-AAAAGTGTATCCTTCATATATCTGAAGTAAATTCATACTAGTGATGTATCATCTCCAGCCATTTAAGTTTAAAAACAGAAAACGTATGATGTGTTTGCTTACTGTTTTATACGCC-TAACGCATGAAGAGGAGATCCTTTTATtcattgcctatacttttatttctaaactttctgtaacactttatcttatatccagcatagaattgagatttccttttt-atttaatctgacaata-ttttttcctctacta--agagccaagcccacttacttttaatgat-aaattgcgtttggttatattttgattacagtatattatgctatgatttctatgcacatatttgtcttttgctgttttgtttgtttttattgcttatgttttgatgttgtgatacttggaagagttaaacttttattctgatggctaccttatgtaatttcataaaatcatctctttctttagacggtagctaatgtctctaaactaagaaaaatagtattagctgtattctctttcttgtcctccctatgtgattcttcatcccacaacttgatttaatcatactaactttgattcccctggtgccattaagtatgcttacatttctataaacaatatcctttgactcccatgcattgcagatgagcagtcagtaaaatcattctgaggaatactttctctttccttttcttccatttttcttagttgtatcatttctatattgccagagcacctacagttgcatttctttcagtcagctttatccaaaatttgtttttgtcttttatttgaagttaagtatattccttgctcactacAACACTAGGGGAAGGAAGGTTTCTGTTGTCATTGTTGTGCTTGTACAGTTGTTTATTTAAAAACTTTGGGGA----AAACAAAAACTGTATGTAGATGGAATGGAGATGAGACAGAAAATGAGAGAGACTGATGATGAGTGTGCCTGTTCTAGACTGGGAGGCATGCTACACTGAGTAGTGTCT-CAAGGCCGCAGGAAAGGATGGTTGATTGTAAGCAGGTGGACTTTTCACTGGAGGAGAGGAGTCCTGCTCTCAACAACCTGTGCAGAACCAGAAACTGGTAATGCTTCAAATCAACTTACAGTCCTGGAGGTAGAAATTTAAGAAAACTCATTTAGCACCTAGTTTCCTAGAAAATATTAGCTACAATTTGCTGAGCATCTGTCATTCTGTCTGTAGCATGGAAGATCTGAA-GCAAGGGAAACTGGATTAGTAACAGTGGGTCAGAAAATTATATAATATTCAACC-AAATCCCTGCTTTACATACACAGCACCTGATATTTCCAGAACTAGAAGGTAAAGAAATTATTTGTGCTTGAACTTGCAGAAAACTGCCTTTTCCCttcttctcttgcatcttaacctggagcttc-ccttttcttgagcctcagtgtgcttcccaactcaacttataattgacttcctgcagtttctccttaggacagggctttgttttgggggtggttaatttgtagggttcataggaaacagaccactcacagcacctgctttttgccatcctcactctcagctgtgagttgaggcccaggaagccttctgccagcctcagctgctgctctcagattagtctgctgagttctttttgcctagtaagaatctctgaatttaggaacattgatgttagcacttgtatttctaggttttccagttcccagggccattaaacatttt-----ttttcctttcctttccttcttccaaaaaaattggtgattcccctgggtccctgtggtttaacctcacaaaacgtccatgataacaccgtgttatattgttttgtcatagttaataccttgttatcccagttgctcagtcagtttttgtgagagattcagggatattaataaagccatgctgttactgctactaacatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTGCATGCGATTTGAACTTGTAA-TTTTATTCAAAGTTTTTCAACAGAGATCCAGAAAAGACCCTCCTTATATTTTTAGTTTTGTGCATTGCAACACTTTTTAGTGAAAAAAA------------------ATGAGAACAACACAAGTGATTTTAAAAGAATAAACCTACAATCCATTAATTATAAAATGAAATACTATGCAGGTGTTAAGAATGAGGGAATCAATAAGAACTTGTGTGGGGTAACTATAAACTT i panTro5.chrY C 0 I 273 s panPan2.chr11 88576405 2455 + 134183262 CTGATACAACAGCTAAATCTAGGTCTGATGCTTATTCTGTGTGGACAACAATAGCAG-------AGCTAATGACTGATTTGTGGGAAGTAAACATTACGTTTGCAGAATCGTACATGATTTCAGTAGAAGGGCAAGGAAATTTCAGCTGGGAACAGATTGCTCCATGGTAATGTGATCACTATGTACCCAACAATGGCTCTTTCTTCCTAGCGTCAATGCAGATGTTGTTTTCTCCTTAACTGTTATCATTTCTGTTTCTAATCACAT-AAAAGTGTATCTGTTACATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCGTTTAAGTGTAAAAAGAGAAAACGTATGATGTGTTTACTCACTGTTTTATACTCTGTAACGCATGAAGAGAAGATCCTTTTATtcattgcctgtacttttatttttaaactttctgaaacactttatgttatatccagcatagaactgagttttcctttttgatttaatctgacaata-ttttttcctctaataagagagtcaagcctacttacttttattggt-aaattctgtttggttatattttggttacagcatgttatgctgtgatctatatgcacatatct-tcttttgctgccttgtttgtttttattgattttgttttgatgttgtgatatttggaagagttaaatttttattctgatggctaccttatgtaattTCATAAAATCATCTCTTTCTTTAG-CAGTAGCTAATGTCTCTAAACTAAGAACAATGGTATTAA-------CTCTTTCTTGTCTTCCCTATGTGATCTTTCATCCCCCAATTTGATATAATAATATTAACTTTGTTTCCCCTGATGCCATTAAGTGCGCCTACATTTctataaacagtatcctttgactcccaggcattacagatgagcagtcagtaaaatcattctgcagaataccttatttttccttttcttctatttttcttagttgtatcatttctatatcgccagagcacctacagttgcatttctttctgtcagctttatccagcatttgtttttgcctcttatttgaagttaaatatattccttgctcactacGACACTGGGGAGAGGAAGGTTT-TGTTGTCATTGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCAAAAACAAACAAAAAATGTACGTAGATGGAATGGAGATAAGACAGAAAATGAGAGAGATTGATAATGAGTGTGCTTATTCTAGACTGGGAGGGGTGCTACACTGAGTAGTGTCT-CAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGAAGGAGAGAAGTCCTGCCTTCAACAACCTGTGCAGAACCAGGAACTGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAGCTCGTTTAGCACCTAGTTTCCTAGAAAATATTAGCTACTATTTGCTGAGCATCTGTCAGTCTGTCTGCAGCATGGAAGATCTGAGTACAGGGGAGACTGGATTAGTAACAGTGGGTCAGAAAATTATATAATATTCAACCAAAATTCCTGCTTTACATAGACGGCACCTGGTATTTCCAGAACTACAAGGTAAAGAAATTATTTGTGcttgaacttgcagaaaactgccttttcccttcttctcttgcatcttaacctggagcttc-tcttttcttgagcctcagtgtccttcccaactcaatttataactgacttcctgcagtttctccttaggacagggctttgttttgggggtggttaatttgtagggttcataggatacagaccactcacagca-ctgctttttgccatcctcactctcagctgtgagttgaggctcaggaagccttctgccagcctcagctgctgttctcagattaatctgctaagttctttttgcttagtaggaatctctgaatttaggaacatagatgttagcaattgtatttctagtttttccagttcccagagccattaaagatttt-----ttt-cctttcctttccttcttccaaaacagttggtgattcccctgggtctctgtggtttaacctcacaaaaggttcatgatgacaccctgttacattgttttgtcatagttaataccttgttatcccagttgctcagtcaatttttgtgagagattcagggatattaataaaactgtgctg---ctgctactagcatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTACGTGTGATTTGAACTTGTAATTTTTATTCAAAGTTTTTCAACAGAGATCCAGAGAAGACCCTCTTTATATTTGTAGTTTTGTGCATTGCAACACTTTTTAGTGAAAAAAAA------------ACC--ATGAGAACAACACAAGTGATTTTAAAAGAATAAACCTATAATCCATTAATTATAAAATGAAATACTGTGCAGGTGTTAAGAATGAGGGAATCAATAAGAACTTGTGTTGGGTAACTATAAACTT i panPan2.chr11 C 0 I 1 s gorGor5.CYUI01002012v1 21685 2469 + 57002 ATGATACAACAGCTAAATATAGGTCTGATGCTCATTCCGTGTGGACAACAATAGCAGCCATTCCCACAAATGGCTGATTTGTGGGAAGTAAACACTACTTTTGCAGAATCTTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTCCATGGTAATGTGATCACTATGTACCCAACAATGGCTCTTTCTTCCTAGCGTCAATGCAGATGTTATTTTCACCTTAACTGTTATCATTGCTGTTTCTAACCACAT-AAAAGTGTATCCTTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCATTTAAGTGTAAAAACAGAAAACGTATGATGTGTTTACT-ACTGTTTTATACTCC-TAACGCATGAAGAGAAGATCCTTTTATtcattgcctatacttttatttctaaactttctgtaacactttatcttatatccagcatagaattgagatttgctttttgatttaatctgacaata-ttttttcctctaata--agagtcaagtccacttacttttaatgag-aaattgtgtttggttatatttcgattacagtatattatgctatgatttatatgcacatatctgtcttttgctgtcttgtttgtttttattgcttttgttttgatgttgtgatatttggaagagttaaacttttattctgatggctaccttatgtaattTCATAAAATCATCTCTTTCTTTAGACAGTAGCTAATGTCTCTAAACTAAGAACAATGGTATTAGCTGTATTCTCTTTCTTGTCCTCCCTATGTGATTTTTCATCCCACAATTTGATTTAATCATATTAACTTTGTTTCCCCTGGTGCCATTAAGTATGCTTACATTTctataaacaatatcctttgactcccaggcattacagatgagcagtcagtaaaatcattctgaggaatactttctctttccttttcttccatttttcttagttgtatcatttctatattgccagagcacctacagttgcatttctttctgtcagctttatccagcatttgtttttgtcttttatttgaagttaaatatattccttgctcactacAACACTGGGGGAAGGAAGGTTTCTGTTGTCATTGTTGTGCTTGTACAGTTGTTTATTTAAAAACATTGGCGA----AAACAAAAACTGTATGTAGATGGAATGGAGATAAGACAGAAAATGAGAGAGACTGATGATGAGTGTGCCTATTCTAGACTGGGAGGCGTGCTACACTGAGCAGTGTCTCCAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGACTTTCCACTGGAGGAGAGAAGTCCTGCGCTCAACAACCTGTGCAGAACCAGAAACGGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCGTTTAGCACCTAGGTTCCTAGAAAATATTAGCTACTATTTGCTGAGCATCTGTCAGTCTGTCTGTAGCATGGAAGATCTGAGTACAGGGGAAACTGGATTAGTAACAGTGGGTCAGAAAATTATATAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTGGTATTTCCAGAACTAGAAGGTAAAGAAATTATTTGTGcttgaacttgcagaaaactgccttttcccttcttctcttgcatcttaacctggagcttc-ccttttcttgagcctcagtgtgcttcccaactcaacttataattgacttcctgcagtttctccttaggacagggctttgttttgggggtggtcaatttgtagggttcataggaaacagaccactcacagcacctgc-ttttgccatcctcactctcagctatgagttgaggcccaggaagccttctgccagcctcagctgctgttctcagattaatctgctgagttctttttgcctagtaagaatctctgaatttaggaacatagatgttagcacttgtatttctaggttttccagttcccagggccattaaacatttt-----ttt-cctttcctttccttcttccaaaaaaattggtgattcccctgggtccctgtggtttaacctcacaaaaggtccatgatgacaccctgttacattgttttgtcgtagttaataccttgttatcccagttgctcagtccgtttttgtgagagattcagggatattaataaaactgtgctgctactgctactgacatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTGTAATTTTTATTCAAAGTTTTTCAACAGAGATCCAGAAAAGACCCTCCTTATATTTTTAGTTTTGTGCATTGCAACACTTTTTAGTGAAAAAAAA------------AAAC-ATGAGAACAACACAAGTGATTTTAAAAGAATAAACCTACAATCCATTAATTATAAAATGAAATACTATGCAGGTGTTAAGAATGAGGGAATCAATAAGAACTTGTGTGGGGTAACTATAAACTT i gorGor5.CYUI01002012v1 C 0 I 1 s nomLeu3.chrUn_GL397743_2 31042 2451 + 112108 ataACACAACAGCTAAATCTAGCTCTGATGTTTATTCTGTGTGGACAATAACAGCAG-------AGCCAATGGCTGATTTGTGGCAAGTAAACACTACTTTTGCAGAATCGTACATGATTTCAGTAGAAGGGCAAGGAAATTTCAGTTGGGAACAGATTGCTCCATGGTAATGTGATCGCTATGTACCCAACAATGGCTCTTTCTTCCTAGCGTCAATGCAGATGTTATTTTCTCCTTAACTATTATCATTTCTGTTTCTAACCATAT-AAAAGTATATCCATTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCATTTAAGTGTAAAAAGAGAAAACGTATGATGTGTTTACTCACTGTTTTATACTCTGTAATGCATGAA---AAGATCCTTTTATtcattgcctgtacttttatttttaaactttctgaaacactttatcttctatccagcatagaactgagtttccctttttgatttaatctgacaatacttttttcctctaataagagagtcaagcccacttacttttattggt-aaattgtgtttggttatattttggttacagcatgttatgctatgatctatatgcacatatct-tcttttgctgtcttgtttgtttttattgattttgttttgatgttgtgatatttggaagagttaaatttttattctgatggctaccttacgtaatttcataaaatcatctctttctttagacagtagctaatgtctctaaactaagaacaatggtgttaa-------ctctttcttgtcttccctatgtgatctttcatcccccaatttgatataatgatgttaactttgtttcccctggtgccattaagtatgcctacatttctataaacaatatcctttgactcccaggcattacagatgtgcagtcagtaaaatcattctgcagaataccttctttttccttttcttctatttttcttagttgtatcatttctgtattgccagagcacctacggttgcatttctttctgtcagctttatccagcatttgtttttgtc-----tttgaggttaaatatattccttgctcactaTGACACTGGTGAAAGGAAGGTTTTTGTTGTCATCGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCGA----AAACAAAAAATGTATGTAGATGGAATGGAGATAAGACAGAAAATGAGAGCGATTGATGATGAGTGTGCTTATTCTAGACTGGGAGGGGTGCTACACTGAGTAGTGTCTCCAAGGCTACAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGGAGGAGAGAAGTCCTGTCTTCAACAACCTGTGCAGAACCAGGAAATGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCATTTAGCACCTAGTTTCCTAGAAAATATTGGCTACTATTTGCTGAGCATCTGTCAGTCTGTCTGTAGCATGGAAGATCTGAGTACAGGAGAGACTGGATTAGTAACAGTGGGTCAGAAAATTATATAATATTCATCCAAAATTCCTGCTTTACATACACAGCACCTGGTATTTCCAGAACTAGAAGGCAAAGAAATTATTTGTGTTTGAACTTGCAGAAAACTGCCTTTTCCCttcttctcttgcatcttaacctggagtttctctttttcttgagcttcagtgtccttcccaactcaatttataattcacttcctgcagtttccccttaggacagggctttgtttcagaggtggttaatttgtagggttcataggatacagaccactcacagcacctgctttttgccatcctcactctcagctgggagttgaggctcaggaagccttctgcaagcctcagctgctgttctcagattaatctgccaaggtctttttgcctagtaggaatctctgaatttagcaacatagatgttagcgcttgtatttctagttttcccagttcccagggccattaaagatttt-----ttt-cctttccttttcttcttccaaaaaagttggtgattccctcgggtccctgtggtttaacctcacaaaaggttcatgatgacaccctgttacattgttttatcatagttaatacctcgttatcccagttgctcagtcagattttgtgagagattcagggatattaataaaactgtgctg---ctgctactaacatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTACATGTGATTTGAACTTGTAATTTTTATTCAAAGTTTTTCAACAGAGATTCAGAAAAGACCCTCCTTATATTTGTAGTTTTGTGCATTGCAACACTTTTTAGTGAAAAAAAA------------AAAACATGAGAACAACACAAGTGATAGTAAAAGAATAAACCTACAATCCATTAATTATAAAATGAAATACTGTGCAGGTGTTAAGAATGAAGGAATCAATAAGAACTTGTGTGGGGTAACTATAAACTT i nomLeu3.chrUn_GL397743_2 I 2330 I 1 s rheMac8.chr14 82547356 2481 + 127894412 ATGATAAAACAGCTAAATCTAGGTCTGATGCTTATTCTGTGTGGACAACAATAGCAG-------AACTGTTGGCTGATTTGTGGGAAGCAAACACTGTTTTTGCAGAATCGTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTTCATGGTAATGTGATCACTGTGTACCCAATAATGGCTCTTTCCTCCTAGCGTCGATGCAGATGTTATTGTCTCCTTAACTATTTTCATTTCTGTTTCTGACTATATAAAAAGTGTATTCCTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCGTTTAAGTGTAAAAAGAGAAAATGTATGATGTGTTTACTCACTGTTTTATACTCTGCAATGCATGAAGAGAAGATCCTTTTATtcattgtctatactttta-ttttaaactttctgaaacattttatcttatatccagcatagaattgagtttcgc-ttgtgatttaatctgacaatacttttttcctctaataagagagtcaagcccacttacttttattgat-aaattgtgtttggttatattttgattacagcatgttctcctgtgatctatatgcacgtatctgtcttttgctgtcttgattgtttttattgcttttgttttgatgtcgtgatattcggaagagttaaatttttattctgatggctaccttatgtgatttcatagaatcatctctttctttagacagtagctaatgtctctaaactatgaacaatagtattaactgtattctctttcttgtcctccctatgtgatctttcatcagccaatttgatataataATATTAACTTTGTTTCCCCTGATGCCATTAAGTATGCCTACATTTctataaacaatatcctttgac-cccaagcattacagatgagcagtcagtaaaatcatttggcagaatatcttcattttcctttccttctatttttcttagttgtatcatttctatattaccagagcacctacagttgaatttctttctgtcagctttcgccagtgtttgtttttgtcttttatttgaagttaaatatattcgttgctcactacAACACTGGGGGAAGGAAGGTTTTTGTTGTAGTTGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCGAAAACAAACAAAAACTGTATGTAGATGGAATGGAGATAAGACAGCAAATGAGAGCGAATGATGATAAGTGTGCTTATTCTAGACTGGGAGGGGTGCTACACTGAGTAGTGTCTCCAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGGAGGAGAGAAGTCCTGCCCTCAACAACCTGTGCAGAATCAGGAACTAGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCGTTTAGCACCTAGTTTCCTAGAAAATATTAGCTACTCTTTGCTGAGCATCTGTCAGTCTGCCTGTAGCATGGCAGATCTGAGTACAGGGGAGACTGGATTAGTAACAATGGGTCAGAAGATAATATAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTCGTATTTCCAGAACTAGAAGGTAAAG-AATTATTTGTGCTTGAACTTGCAGAAAACTGCCTtttcccttcttctcttgtatctcaacctgaagcttc-tcttttcttgagcctcagtgaactttccaactcaatttataattgactttctgcagtttctccttaggacagggctttgttttggggatggttaactcgtagggttcataggatacagaccactcacagcacctgctttttgtcatccttactctcagctgtgagttgaggcccaggaagccttctgccagcctcagctgctgttctcagattaatctgctgagttcttgctgcctagtaggaatctctgaatttaggaacatagatgttagcacttgtatttctaggttttccagttcccagggccattaaagatttttttccttt-cctttcctttccttcttccaaaaaagttggtgattcccctggatccctatggtttaacctcacaaaacgttcatgatgacaccttgttacattgttttgtcatagttaataccttgttatcccagttgctcggtcagtttttgtgagagattcagggatattaataaaactgtgctg---ctgctactaacatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTATAATTTTTATTCAAAGTTTTTCAA-AAAAATACAGAAAAGACCCTCCTTGTATTTGTAGCTTCGTGCATTGCAACACTTTTTAGTGGAAAAGAA-ACAAAAAACAAAAAACATGAGAACAACAGAAGTGATTTTAAAAGAATAAACCTACAATCCACTAATTATAAAATGAAATACTATGCAGCTGTTAAGAATGAGGAAATCAATAAGAAC-AGTGTGGGATAACTGTAAACTT i rheMac8.chr14 C 0 I 1 s macFas5.chr14 85835373 2481 + 130733371 ATGATAAAACAGCTAAATCTAGGTCTGATGCTTATTCTGTGTGGACAACAATAGCAG-------AGCTGTTGGCTGATTTGTGGGAAGCAAACACTGTTTTTGCAGAATCGTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTTCATGGTAATGTGATCACTGTGTACCCAATAATGGCTCTTTCCTCCTAGCGTCGATGCAGATGTTATTGTCTCCTTAACTATTTTCATTTCTGTTTCTGACTATATAAAAAGTGTATTCTTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCGTTTAAGTGTAAAAAGAGAAAATGTATGATGTGTTTACTCACTGTTTTATACTCTGCAATGCATGAAGAGAAGATCCTTTTATtcattgtctatactttta-ttttaaactttgtgaaacattttatcttatatccagcatagaattgagtttcgc-ttgtgatttaatctgacaatacttttttcctctaataagagagtcaagcccacttacttttattgat-aaattgtgtttggttatattttgattacagcatgttatcctgtgatctatatgcacgtatctgtcttttgctgtcttgattgtttttattgcttttgttttgatgttgtgatattcggaagagttaaatttttattctgatggctaccttatgtgatttcatagaatcatctctttctttagacagtagctaatgtctctaaactatgaacaatagtattaactgtattctctttcttgtcctccctatgtgatctttcatcagccaatttgatataataATATTAACTTTGTTTCCCCTGGTGCCATTAAGTATGCCTACATTTctataaacaatatcctttgac-cccaagcattacagatgagcagtcagtaaaatcatttggcagaatatcttcattttcctttccttccatttttcttagttgtatcatttctatattaccagagcacctacagttgaatttctttctgtcagctttcgccagtgtttgtttttgtcttttatttgaagttaaatatattcgttgctcactacAACACTGGGGGAAGGAAGGTTTTTGTTGTAGTTGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCAAAAACAAACAAAAACTGTATGTAGATGGAATGGAGATAAGACAGCAAATGAGAGCGAATGATGATAAGTGTGCTTATTCTAGACTGGGAGGGGTGCTACACTGAGTAGTGTCTCCAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGGAGGAGAGAAGTCCTGCCCTCAACAACCTGTGCAGAATCAGGAACTGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCGTTTAGCACCTAGTTTCCTAGAAAATATTAGCTACTCTTTGCTGAGCATCTGTCAGTCTGCCTGTAGCATGGCAGATCTGAGTACAGGGGAGACTGGATTAGTAACAATGGGTCAGAAGATAATATAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTGGTATTTCCAGAACTAGAAGGTAAAG-AATTATTTGTGCTTGAACTTGCAGAAAACTGCCTtttcccttcttctcttgtatctcaacctgaagcttc-tcttttcttgagcctcagtgaacttcccaactcaatttataattgactttctgcagtttctccttaggacagggctttgttttggggatggttaacttgtagggttcataggatacagaccactcacagcacctgctttttgtcatccttactctcagctgtgagttgaggcccaggaagccttctgccagcctcagctgctgttctcagattaatctgctgagttcttgttgcctagtaggaatctctgaatttaggaacatagatgttagcacttgtatttctaggttttccagttcccagggccattaaagatttttttccttt-cctttcctttccttcttccaaaaaagttggtgattcccctggatccctatggtttaacctcacaaaacgttcatgatgacaccttgttacattgttttgtcatagttaataccttgttatcccagttgctcagtcagtttttgtgagagattcagggatattaataaaactgtgctg---ctgctactaacatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTATAATTTTTATTCAAAGTTTTTCAA-AAAAATACAGAAAAGACCCTCCTTGTATTTGTAGCTTCGTGCATTGCAACACTTTTTAGTGGaaaaaaa-acaaaaaacaaaaaaCATGAGAACAACAGAAGTGATTTTAAAAGAATAAACCTACAATCCACTAATTATAAAATGAAATACTATGCAGCTGTTAAGAATGAGGGAATCAATAAGAAC-AGTGTGGGATAACTGTAAACTT i macFas5.chr14 C 0 I 1 s macNem1.NW_012010789v1 260012 2481 - 11451906 ATGATAAAACAGCTAAATCTAGGTCTGATGCTTATTCTGTGTGGACAACAATAGCAG-------AGCTGTTGGCTGATTTGCGGGAAGCAAACACTGTTTTTGCAGAATCGTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTTCATGGTAATGTGATCACTGTGTACCCAATAATGGCTCTTTCCTCCTAGCGTCGATGCAGATGTTATTGTCTCCTTAACTATTTTCATTTCTGTTTCTGACTTTATAAAAAGTGTATTCTTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCGTTTAAGTGTAAAAAGAGAAAATGTATGATGTGTTTACTCACTGTTTTATACTCTGCAATGCATGAAGAGAAGATCCTTTTATtcattgtctatactttta-ttttaaactttctgaaacattttatcttatatccagcatagaattgagtttcgc-ttgtgatttaatctgacaatacttttttcctctaataagagagtcaagcccacttacttttattgat-aaattgtgtttggttatattttgattacagcatgttatcctgtgatctatatgcacgtatctgtcttttgctgtcttgattgtttttattgcttttgttttgatgtcgtgatattcggaagagttaaatttttattatgatggctaccttatgtgatttcacagaatcatctcttactttagacagtagctaatgtctctaaactatgaacaatagtattaactgtattctctttcttgtcctccctatgtgatctttcatcagccaatttgatataataATATTAACTTTGTTTCCCCTGGTGCCATTAAGTATGCCTACATTTctataaacaatatcctttgac-cccaagcattacagatgagcagtcagtaaaatcatttggcagaatatcttcattttcctttccttccatttttcttagttgtatcatttctatattaccagagcacctacagttgaatttctttctgtcagctttcgccagtgtttgtttttgtcttttatttgaagttaaatatattcgttgctcactacAACACTGGGGGAAGGAAGGTTTTTGTTGTAGTTGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCGAAAACAAACAAAAACTGTATGTAGATGGAATGGAGATAAGACAGCAAATGAGAGCGAATGATGATAAGTGTGCTTATTCTAGACTGGGAGGGGTGCTACACTGAGTAGTGTCTCCAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGGAGGAGAGAAGTCCTGCCCTCAACAACCTGTGCAGAATCAGGAACTGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCGTTTAGCACCTAGTTTCCTAGAAAATATTAGCTACTCTTTGCTGAGCATCTGTCAGTCTGCCTGTAGCATGGCAGATCTGAGTACAGGGGAGACTGGATTAGTAACAATGGGTCAGAAGATAATACAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTGGTATTTCCAGAACTAGAAGGTAAAG-AATTATTTGTGCTTGAACTTGCAGAAAACTGCCTtttcccttcttctcttgtatctcaacctgaagcttc-tcttttcttgagcctcagtgaacttcccaactcaatttataattgactttctgcagtttctccttaggacagggctttgttttggggatggttaacttgtagggttcataggatacagaccactcacagcacctgctttttgtcatccttactctcagctgtgagttgaggcccaggaagccttctgccagcctcagctgctgttctcagattaatctgctgagttcttgttgcctagtaggaatctctgaatttaggaacatagatgttagcacttgtatttctaggttttccagttcccagggccattaaagatttttttccttt-cctttcctttccttcttccaaaaaagttggtgattcccctggatccctatggtttaacctcacaaaacgttcatgatgacaccttgttacattgttttgtcatagttaataccttgttatcctagttgctcagtcagtttttgtgagagattcagggatattaataaaactgtgctg---ctgctactatcatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTATAATTTTTATTCAAAGTTTTTCAA-AAAAATACAGAAAAGACCCTCCTTGTATTTGTAGCTTCGTGCATTGCAACACTTTTTAGTGGaaaaaaa-acaaaaaacaaaaaaCATGAGAACAACAGAAGTGATTTTAAAAGAATAAACCTACAATCCACTAATTATAAAATGAAATACTATGCAGCTGTTAAGAATGAGGGAATCAATAAGAAC-AGTGTGGGATAACTGTAAACTT i macNem1.NW_012010789v1 C 0 I 1 s chlSab2.chr1 81237745 2474 + 126035930 ATGATAAAACAGCTAAATCTAGGTCTGGTGCTTATTCTGGGTGGATAACAATAGCAG-------AGCTGTTGGCTGATTTGTGGGAAGCAAACACTGTTTTTGCAGAGTCGTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTTCATGGTAATGTGATCACTGTGTACCCAACAATGGCTCTTTCCTCCTAGCATCAATGCAGATGTTATTGTCTCCTTAACTATTTTCATTTCTGTTTCTGACCATATAAAAAGTGTATTCTTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCGTTTAAGTGTAAAAAGAGAAAACGTATGCTGTGTTTACTCACTGTTTTATACTCTGCAATGCAT-----GAAGATCCTTTTATtcattgtctatactttta-ttttaaactttctgaaacattttatcttatatccagcatagaattgagtttcgc-ttgtgatttaatctgacaatatttttttcctctaataagagagtcaagcccacttacttttattgataaaattgtgtttggttatattttgattacagcatgttatcctatgctctatatgcacgtatctgtcttttgctgtcttgattgtttttattgcttttgttttgacatcatgatattcggaagagttaaatttttattctgatggctaccttatgtaatttcataaaatcatctctttctttagacagtagctaatgtctctaaactatgaacaatagtattaactgtattctctttcttgtcctccctatgtgatctttcatcagccaatttgatataataATATTAACTTTGTTTCGCCTGGTGCCATTAAGTATGCCTACATTTctataaacaatatcctttgactcccaagcattacagatgagcagtcagtaaaatcatttggcagaatatcttcattttcctttccttccatttttcttagttgtatcatttctatattaccagagcacctagagttgaatttctttctgtcagctttctccagtatttgtttttgtcttttatttgaagttaaatatattccttgctcactacAACACTGGGGGAAGGAAGGTTTTTGTTGTAGTTGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCGGAAACAAACAAAAGCTGTATGTAGATGGAATGGAGATAAGACAGCAAATGAGAGAGAATGATGATGAGTGTGCTTGTTCTAGACTGGGAGGGGTGCTACACGGAGTAGTGTCTCCAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGGAGGAGAGAAGTCTTGCCCTCAACAACCTGTGCAGAATCAGGAACTGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAGTTTAAGAAAACTCATTTAGCACTTAGTTTCCTAGAAAATATTAGCTACTCTTTGCTGAGCATCTGTCAGTCTGTCTGTAGCGTGGCAGATCTGAGTACAGGGGAGACTGGACTAATAACAATGGGTCAGAAGATAATATAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTGGTATTTCCAGAACTAGAAGGTAAAG-AATTATTTGTGCTTGAACTTGCAGAAAACTGCCTtttcccttcttctcttgtatctcaacctgaagcttc-tcttttcttgagcctcagtgaacttcccaactcaatttataattgactttctgcagtttctcc-taggacagggctttgttttgcggatggttaacttgtagggttcataggatacagaccgctaacagcacctgctttttgtcatccttactctcagctgtgagttgaggcccaggaagccttctgccagcctcagctgctgttctcagattaacctgctgagttcttgttacctagtaggaatctctgaatttaggaacatagatgttagcacttgtatttctaggttttccagttcccagggcccttaaaggtttt-----ttt-cctttcctttccttcttccaaaaaagttggtgattcccctggatccctgtggtttaacctcacaaaatgttcatgatggcaccctgttacattgttttgtcatagttaataccttgttatcccagttgctcagtcagtttttgtgagagattcagggatattaataaaactgtgctg---ctgctactaacatcttGCATAAAAGCCCTGTTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTATAATTTTTATTCAAAGTTTTTCAACAAAAATACAGAAAAGACCCTCCTTGTATTTGTAGCTTCGTGCATTGCAACACTTTTTAGTGGGAAAAAACCCAAAAAACAAAAAACATGAGAACAACAGAAGTGATTTTAAAAGAATAAACCTACAATCCACTAATTATAAAATGAAATACTATGCAACTGTTAAGAATGAGGGAATCAATAAGAAC-AGTGTGGGGTAACTGTAAACTT i chlSab2.chr1 C 0 I 1 s colAng1.NW_012116622v1 200694 2463 + 3898586 ATGATAAAACAGCTAAATCTAGGTCTGATACTTATTCTGTGTGGACAACAATAGCAG-------AGCTATTGGCTGATTTGTGGGAAGCAAACACTGTTTTTGCAGAATTGTACATGATTTCAGTAGAAGGGCAAGGACATTTCAGTTGGGAACAGATTGCTTCATGGTAATGTGATCACTGTGTACCCAACAATGGCTCTTTCCTCCTAGCGTCAATGCAGATGTTATTGTCTCCTTAACTATTTTCATTTCTGTTTCTAACCATATAAAAAGTGTATTCTTTATATATCTGAAGTAAATTCATACTAGTGGTGTAACATCTCCAGCCATTTAAGTGTAAAAAGAGAAAACGTATGATGTG-GTACTCACTGTTTTATACTCTGCAATGCATGAAGAGAGGATCCTTTTATtcattgtctatacttttatttttaaactttctgaaacattttatcttatatccagcatagaattgagttttgc-ttgtgatttaatctgacagta-ttttttcctctaataagagagtcaagcccacttacttttattgat-aaatggtatttggttatattttgattacagcatgttatcctatgatctatatacacgtatctgtcttttgctgtcttgattgtttttattgcttttgttttgatgtcatgatattcagaagagttaaatttttattctgatggctaccttatgtaatttcataaaatcatctctttctttagacagtagctaatgtctctaaactatgaacaatggtagtaactgtattccctttcttgtcctccctatgtcctccct-atcatccaatttgatataataatattaactttgtttctgctggtgccattaagtatgcctacatttctataaacaatatcctttgattcccaggcattacagatgagcagttagtaaaatcatttggcagaatatcttcttttttctttccttccatttttcttagttgtatcatttctatattgccagagcacctacagttgaatttctttctgtcagctttctccaatatttgtttttgtcttttatttgaagttaagtatattccttgctcactacAACACTGGGGGAAGGAAGGTTTTTGTTGTAGTTGTTGTGCTTGTACAGTTGCTTATTTAAAAACATTGGCGAAAACAAGCAAAACCTGTGTGTAGATGGAATGGAGAAAAGACAGCAAATGAGA--GAATGATGATGAGTGTGCTTATTCTAGACTGGGAGGGGTGCTACACTGAGTAGTGTCTCCAAGGCTGCAGGAAAGGATGGTTGATTGTGAGCAGGTGGAGTTTCCACTGGAGGAGAGAAGTCCTGCCCTCAACAACCTGTGCAGAATCAGGAACTGGTAATGGTTCAAATCAACTTACAGACCTGGAGGTAGAAATTTAAGAAAACTCGTTTAGCACCTAGTTTCCTAGAAAATATTAGCTACTATTTGCTGAGCATCTGTCAGTCTGCCTGTAGCATGGCAGATCTGAGTACAGAGGAGACTGGATTAGTAACAATGGGTCAGAAGATAATATAATATTCAACCAAAATTCCTGCTTTACATACACAGCACCTGGTGGTTCCAGAACTAGAAGGTAAAG-AATTATTTGTGCTTGAACTTGCAGAAAACTGCcttttcc---cttctcttacatcttaacctggagcttc-tcttttcttgagcctcagtgaacttcccaattcaattcataattgatttcctgcagtttctccttaggacagggctttgttttggggatggttaatttgtagggttcataggatacagaccactcacagcacctgctttttgtcatccttactctcagctatgagttgaggcccaggaagccttctgccagcctcagctgcagttctcagattaatctgctgagttcttgttgcctagtaggaatctctgaatttaggaacatagatattagcacttgtatttctaggtttttcagttcccagggccattaaagatttt-----ttt-cctttcctttccttcttccaaaaaagttgatgattcccctgggtccctgtggtttaacttcacaaaaggttcatgatgacaccctgttacattgttttgtcatagttaataccttgttatcccagttgctcagtcagtttttgtgagagattcagggatattaataaaactgtgctg---ctgctactaacatcttGCATAAAAGCCCTATTAATTAAAATGTTTATTTTGCATGTGATTTGAACTTATAATTTTTATTCAAAGTTTTTCAACAAAAATACAGAAAAGACCCTCCTTGTATTTGTAGCTTCGTGCATTGCAACACTTTTTAGTGGAACAAAA-A--------AAAAAACATGAGAACAACAGAAGTGATTTTAAAAGAATAAACCTACAATCCACTAAATATAAAATGAAATACTATGCAGCTGTTAAGAATGAGGGAATCAATAAGAAC-AGTGTGGGGTAACTGTAAACTT i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=26275.000000 s hg38.chr14_KI270725v1_random 72666 11 + 172810 TAAAAAAAAAA s panPan2.chr11 88578861 11 + 134183262 TAAAAAATAAA i panPan2.chr11 I 1 I 1 s gorGor5.CYUI01002012v1 24155 10 + 57002 TAAAAAATAA- i gorGor5.CYUI01002012v1 I 1 I 2 s nomLeu3.chrUn_GL397743_2 33494 11 + 112108 AAAAAAATAAA i nomLeu3.chrUn_GL397743_2 I 1 I 1 s rheMac8.chr14 82549838 11 + 127894412 TAAGAAATAAA i rheMac8.chr14 I 1 C 0 s macFas5.chr14 85837855 11 + 130733371 TAAGAAATAAA i macFas5.chr14 I 1 C 0 s macNem1.NW_012010789v1 262494 11 - 11451906 TAAGAAATAAA i macNem1.NW_012010789v1 I 1 C 0 s chlSab2.chr1 81240220 11 + 126035930 TAAAAAATAAA i chlSab2.chr1 I 1 C 0 s colAng1.NW_012116622v1 203157 11 + 3898586 TAAAAAATAAA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e panTro5.chrY 308991 273 + 26350515 I a score=2905141.000000 s hg38.chr14_KI270725v1_random 72677 810 + 172810 -TTAATGCTCATGTGACCATATTATCG-TT-----AAAAAAATA--CAAGCATACTTGCACACACCTTCAAGCAAAATGGGTACACGCATTTAAAAATATTTAAATTAAGTAAATGGCCCAATAATTTAACTTTGTATAATTCTATGTTCTCCGATTATTTTATATGCTAGAAACAGGCATTACTGTTGTGTTTATTTCAtttgaaataattgt--agtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggataccttatttattactgttgagttttgagaattttttacatatgctagatgtaagttctttgtcagatatatggtatgcaaattatttctcccagtctgtaattcattttttcaacctctttacagggtctaagt-------aa-----aaaaaaaaaaaaaaaagtgtttatttattttaatgaagtccagttttatcactttttccttctgtagattttgttttcaacatcaagcctaaaaattctttgcctagcccaaggtctcaagagttttcttctattttaaaaagtttaatga--------------------atttaTTTATTTATTAATTAtttttgagacgaggtttcgccgaagctgtagtgcagtggtgtcatcattgctcactgcagccactaacagctggattgaagtgatccttccacctcagccacttgagtagtagctgggattacaggcacgagctaccatacacaactttaagttttataATAttgcattttacatttaagcctgtgatttatgtgagctaaattttatataaagtataaatttaggtcagtcttagt s panTro5.chrY 309264 809 + 26350515 -TTAATGTTCATGTGACCATATTATCG-TT-----AAAAAAGTA--CAAACATACTTGCACACAACTTCAAGCAAAATGGGTACACACATTTAAAAATATTTAAATTAAGTAAATGACCCAATAATTTAACTTTGTACAATTCTATGTTCTCTGATTATTTTATATGCTGGAAACAGGTATAACTGTTTTGTTTATTTCAtttgaaataattgt--agtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggataccttatttattactactgagttttgagaattttttacatatgctagatgtaagttctttgtcagatatatggtatgcaaattatttctcccagtctgtaattcattttttcaacgtctttac-gggtctttct-------aa-----gttaaaaaaaaaaaaagtgtttatttattttaatgaagtccagttttatcactttttccttttgtagattttgtttttgatatcaagcctaaaaattatttgcctagcccaaggtctcaagagttttcttatattttaaaaagtttaatGA--------------------AtttatttatttattaattatttttgagatgaggtttcgcccaagctgtagtgcagtggtgccatcgttactcactgcagccagtaactgctggattgaagtgatccttccacctcagccacttgagtagtagctgggattacaggcaggagctaccatacacaactttaagttttatCATAttacattttacatttaagcctgtgatttatgtgagctaaattttatataaagtataaatttaggtaagtcttagt i panTro5.chrY I 273 C 0 s panPan2.chr11 88578873 825 + 134183262 -TATATGCTCATGTGACCATATTATCGTTT-----AAAAAAATA--CAAGCATACTTGCACACACCTTCAAGCAAAATGGGTACATGCATTTAAAAATATTTAAATTAAGTAAATGGTCCAATAATTTAACTTTGTAAAATTCTATGTTCTCTGATTATTTTATATGCTAGAAACAGGCATTACTGTTTTGTTTATTTCAtttgaaataattgt--agtcacatgaggtttaagttataagacagagaggtcacatatgcctattttctaattggataccttatttattactattgagttttgagaattctttatatatgctagatgtaagctctttgtcagatatatagtatgcaaattatttctcccagtctgtaattcatgttttcaacctctttacagggtctaagt------------------taaaaaaaaaaggtgtttatttattttaatgaagtccagttttatcgctttttccttttgtagattttgtttttgatatcaagcctaaaaattctttgcctagcccaaggtctcaagagttttcttctatttttaaaagtttAATGAATGAATGAatttatttatttatttatttatttatttattatttTTGACACGAGGTTtcgcccaagctgtagtgcagtggtgccatcattgctcactgcagccacgaactactggactgaagtgatccttctgtctcagccactggagtagtagctgagattacaggcacgagctaccatacatgacttaaagttttataATACtacattttacatttaagcctgtgatttatgtgagctaaattttatataaagtataaatttaggtcagtcttagt i panPan2.chr11 I 1 C 0 s gorGor5.CYUI01002012v1 24167 816 + 57002 -TTAATGCTCATGTGACCATATTATCG-TT-----AAAAAAATA--CAAGCATACTTGCACACACCTTCAAGCAAAATGGGTACACGCATTTAAAAATATTTAAATTAAGTAAATGGCCCAATAATTTAACTTTGTACAATTCTATGTTCTCTGATTATTTTATATGCTAGAAACAGGCATTACTGTTTTGTTTATTTCAtttgaaataattgt--agtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggataccttatttattactattgagttttgagaattttttacatatgctagatgtaagttctttgtcagatatatggtatgcaaattatttctcccactctgtaattcattttttcaacctctttacagggtctttctaactaaaaa-----aaaaaaaaaaaaaaaagtgtttatttattttaatgaagtccagttttatcactttttcctt-tgtagattttgtttttgatatcaagcctaaaaattatttgcctagcccaaggtctcaagagttttcttctattttaaaaagtttaatga--------------------atttaTTTATTAATTAATTAtttttgagacgaggtttcacccaagctgtagtgcagtggtgccatcattgctcactgcagccactaactgctggattgaagtgatccttccacctcagccacttgagtagtagctgggattacaggcacgagctaccatacacaactttaagttttataATAttacattttacatttaagcctgtgatttatgtgagctaaattttgtataaagtataaatttaggtcagtcttagt i gorGor5.CYUI01002012v1 I 2 C 0 s nomLeu3.chrUn_GL397743_2 33506 802 + 112108 -TATATGCTCATGTGACCATATTATTG-TT-----AAAAAAATAACCAAGAATACTTGCACACAGCTTCAAGCAAAATGGGTACATTCATTTAAAAATATTTAAATTAAGTAAATGGCCCAATAATTTAACTTTGTAAAATTCTGTGTTCTCCGATTATTTTATATGCTAGAAACAGGCATTACTGTTTTGTTTATTTCAtttgaaataattgt--agtcacatgaggtttaagttataatacacagaggtcacatatgccaattttctaaatggataccttatttattactattgagttttgagaattctttacatatgctagatgtaag-------------acatggtatgcaaattatttctcccagtctgtaattcagtttttcaacctctttacagggtctttct-------aa-----gtaaaaaaaaaaaaaagtgtctatttattttaatgaagtccagttttatcactttttccttttgtagattttgtttttgatatcaagcctaaaaattctttgcctagcccaaggtctcaagagttttcttctatttttaaaagtttaatTAATTA----------------ATTAGTTAAtttgtttattatttttgagacgaggtttcgcccaagctgtagtgcagtggtgccatcattgctcactgtagccacaaacta-tggactgaagtgatccttctgcctcagccactggagtagtagctgagattacaggcacgagctaccacacacaacttaaagttttgtaATACtacatttcacatttaagcctgtgatttatgtgagttaaattttatataaagtataaatttaggtcaatcttagt i nomLeu3.chrUn_GL397743_2 I 1 C 0 s rheMac8.chr14 82549849 820 + 127894412 GTATATGCTCATGTAACCATATTATCG-TT-----AAAAAAATA--CAAGCATACTTGTACACACCTTCAAACAAAATTGGTACATGCATTTAAAAATATTTAAATTAAGTAAATGGTCCAATAATTTAACTTTGTACAATTCTATGTTCTCTGATTATTTTATATGCTAGAAACAGGCATTACTGTTTCAtttatttcatctgaaataattgtagagtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggatacc----ttattactattgagttttgagaattctttacataagctagatgtaagttctttgtcagata-atggtgtgcaaattatttctcccagtctgtaattcattttttcaacctctttacagggtctttct-------aagttatatatatatataaaaaaaagtttatttattttaatgaagtccagttttatcactttttccttttgtggattttgtttttgatatcaagcctaaaaattctttgcctagcccgagacctcaagagttttcttctatttttaaaagtttAATGA------------atttatttatttatttatttatttatta-ttttgagatgaggtttcactcaaactgtagtgcagtggtgccatcattgctcactacagccacaaactactggactgaagtgatccttccgcctcagccacttgagtagtagctgagattacaggcaaaagctaccatacacaacttaaagttttataATAttacgttttacatttaagcttgtgatttatgtgagctacattttatataaagtataaatttaggtcaatcttaat i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85837866 822 + 130733371 GTATATGCTCATGTAACCATATTATCG-TT---AAAAAAAAATA--CAAGCATACTTGTACACACCTTCAAGCAAAATTGGTACATGCATTTAAAAATATTTAAATTAAGTAAATGGTCCAATAATTTAACTTTGTACAATTCTATGTTCTCTGATTATTTTATATGCTAGAAACAGGCATTACTGTTTCAtttatttcatctgaaataattgtagagtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggatacc----ttattactattgagttttgagaattctttacataagctagatgtaagttctttgtcagata-atggtgtgcaaattatttctcccagtctgtaattcattttttcaacctctttacagggtctttct-------aagttatatatatatatatataaaagtttatttattttaatgaagtccagttttatcactttttccttttgtggattttgtttttgatatcaagcctaaaaattctttgcctagcccgagacctcaagagttttcttctatttttaaaagtttAATGA------------atttatttatttatttatttatttatta-tttTGAGATGAGGTTtcactcaaactgtagtgcagtggtgccatcattgctcactacagccacaaactactggactgaagtgatccttccgcctcagccacttgagtagtagctgagattacaggcaaaagctaccatacacaacttaaagttttataATAttacgttttacatttaagcttgtgatttatgtgagctacattttatataaagtataaatttaggtcaatcttaat i macFas5.chr14 C 0 C 0 s macNem1.NW_012010789v1 262505 817 - 11451906 GTATATGCTCATGTAACCATATTATCG-TT----AAAAAAAATA--CAAGCATACTTGTACACACCTTCAAGCAAAATTGGTACATGCATTTAAAAATATTTTAATTAAGTAAATGGTCCAATAATTTAACTTTGTACAATTCTATGTTCTCTGATTATTTTATATGCTAGAAACAGGCATTACTGTTTCAtttatttcatctgaaataattgtagagtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggatacc----ttattactattgagttttgagaattctttacataagctagatgtaagttctttgtcagata-atggtgtgcaaattatttctcccagtctgtaattcattttttcaacctctttacagggtctttct-------aagttatatatatatattaaaaaaagtttatttattttaatgaagtccagttttatcactttttccttttgtggattttgtttttgatatcaagcctaaaaattctttgcctagcccgagacctcaagagttttcttctatttttaaaagtttAATGA----------------Atttatttatttatttatttatta-ttttgagatgaggtttcactcaaactgtagtgcagtggtgccatcattgctcactacagccacaaactactggactgaagtgatccttccgcctcagccacttgagtagtagctgagattacaggcaaaagctaccatacacaacttaaagttttataATAttacgttttacatttaagcttgtgatttatgtgagctccattttatataaagtataaatttaggtcaatcttaat i macNem1.NW_012010789v1 C 0 C 0 s chlSab2.chr1 81240231 839 + 126035930 GTATATGCTCATGTAACCATATTATCG-TT-AAAAAAAAAAATA--CAAGCATACTTGCACACACCTTCAAGCAAAATGGGTACATACATTTAAAAATATTTAAATTAAGTAAATGGTCCAATAATTTAACTTTGTAAAATTCCATGTTCTCTGATTATTTTATATGCTAGAAACAGGCATTACTGTTTCATTTATTTCAtttgaaataattgtagagtcacatgaggtttaagttataatacagagaggtcacatatgcctattttctaattggctaccttatttattactattgagttttgagaattctttacatatgctagatgtaagttctttgtcaaata-atggtatgtaaattatttctcccagtctgtaattcattttttcaacttctttacagggtctttcc-------aagtt-taaaaaaaaaaaaaaagatgtttatttattttaatgaagtccagttttatcactttttccttttgtggattttgtttttgatatgaagccttaaaattctttgcctagcctgagacctcaagagttttcttctacttttaaaagtttAATGAatttatttatttatttatttatttatttatttatttatta-tttTGAGACGAGGTTtcacgcaaactgtagtgcagtggtgccgtcattgctcactacagccacgaactactggactgaagtgatccttccgcctcagccacttgagtagtagctgggattacagggaaaagctaccatacacaacttaaagttttataATAttacattttacacttaagcctgtgatttatgtgagctaagttttatataaagtataaatttaagtcaatcttagt i chlSab2.chr1 C 0 I 203 s colAng1.NW_012116622v1 203168 818 + 3898586 GTATATGCTCATGTAACCATATTATCG-TTAAAAAAGAAAAATA--CAAGCATATTTGCACACACCTTCAAGCAAAATGGGTACATGCATTTAAAAATATTTAAATTAAGTAAATGGTCCAGTACTTTAACTTTGTACAATTCTATGTTCTCTGATTATTTTATATGCTAGAAACAGGTATTACTGTTTCAtttatttcatctgaaataattgtagagtcacatgaggtttaagttataatacagaggggtcacatatgcctattttctaattggatacc----ttattactagtgagttttgagaattatttacataagctagatgtaagttctttgtcagata-gtggtgtgcaaattatttctcccagtctgtaattcattttttcaacctctttacagggtctttct-------a---tttaaaaaaaaaaaaaaagatgtttatttattttaatgaagtccagttttatcacttttttcttttgtggattttgtttttgatatcaagcctaaaaattctttgcctagcccgagacctcaagagttttcttctatttttgaaagtttAATGA----------------ATGAATGAAtttatttatttatta-ttttgagacgaggtttcactcaaactgttgtgcagtggtgccatcattgctcactatagccgcgaactactggactgaagcgatccttccgcctcagccacttgagtagtagctgggattacaggcaaaagctactatacacaacttaaagttttataATAttacattttacatttaagcctgtgatttatgtgagctaaattttatataaagtataaatttaggtcaatcttagt i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=978778.000000 s hg38.chr14_KI270725v1_random 73487 269 + 172810 ttttgtacctgtgaatgtccaattgctctagcaccatttgttgaaaaagatatccttcctttaaactgattttgcatccttgt---aaaaaaaaatcagatgaatatagtgtggTCTGTCACCTTTTAATAAGATAAAAACATTGGCACTCACCAGATATCGAAGTTTAGAAATTTTTTTAAAGCTAAACTTCTGAAGATAGAATAAAAACACCTTCACATGTCAAATTAGTCAATTTGTATAGGACTAATTCATTTAAATATATTAAAATA s panTro5.chrY 310073 272 + 26350515 ttttgtacctgtgaatgtccaattgctctagcaccatttgttgaaaaagatatccttcctttaaactgattttgcatccttgttaaaaaaaaaactcagttgattatagtgtggTCTGTCACCTGTTAATAAGATAAAAACATTGGCACTCACCAGATATCGAAGTTTAGAATTTTTTTTAAAGATACACTTCTGAAAATTGAATAAAAACACCTTCACATGTCAAATTAGTCAATTTGTATAGGACTAATTCATTTAAATATATTAAAACA i panTro5.chrY C 0 C 0 s panPan2.chr11 88579698 271 + 134183262 ttttatgtctatgaatgtccaattgctctagcaccatttgttgaaaaaggtatccttcctttaaactgtttttgcatccttgtta-aaaaaaaaatcagttgaatattgtgtggTCTGTCACCTTTTAATGAGATAAAAACATTAACACTCACCAGATATTGAAGTTTAGAAACTTTTTTAAAGCTAAACTTCTGAAAATAGAATACAAAATAAAAAACATGTCAAATTAGTCAATTTGCATAAGACCAGTTCATTTAAATATATTAAAATA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 24983 270 + 57002 ttttgtacctgtgaatgtccaattgctctagcaccatttgttgaaaaagatatccttcctttaaactgattttgcatccttgtta-aaaaaaaaatcagttgaatatagtgtggTCTGTCA-CTTTTAATAAGATAAAAACATTGGCACTCACCAGATATCGAAGTTTAGAAATTTTTTTAAAGCTAAACTTCTGAAAATTGAATAAAAACACCTCCACATGTCAAATTAGTCAATTTGTATAGGACTAATTCATTTAAATATATTAAAATA i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 34308 269 + 112108 ttttgtacctatgaatgtccaattgctctagcaccatttgttgaaaaaggtatccttcctttaaactgtttttgcatccttgt---taaaaaaagtcagttgaatatcgtgtggTCTGTCACCTTTTAATAAGATAAAAACATTAACACTCACCAGATATCGAAGTTTAGAAATTTTTTTAAAGCTAAACTTCTGAAAATAGAATAAAAACACCATCACATGTCGAATTAGTCAATTTGCATAGGACTAATTCATTTAAGTATATTAAAATA i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82550669 269 + 127894412 ttttgtacctatgaatgtccaattgctgtaggaccagttgttgaaaaagatatccttcctttaaactgttcttgcatccttgt---taaaagaaatcagttgaatataatgtggTGTATCACCTTTTAATAAGATAAAAACATTAACACTCACCAGATATCGAAGTTTGGAAATTTTTTTAAAGCCAAACTTCTGAAAATAGAATAAAAACACCTTCATATGTCAAATTAGTCAATTTGCACAGGACTAATTCATTTAAATATATTAAAATA i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85838688 269 + 130733371 ttttgtacctatgaatgtccaattgctctaggaccagttgttgaaaaagatatccttcctttaaactgttcttgcatccttgt---taaaagaaatcagttgaatataatgtggTGTATCACCTTTTAATAAGATAAAAACATTAACACTCACCAGATATCGAAGTTTGGAAATTTTTTTAAAGCCAAACTTCTGAAAATAGAATAAAAACACCTTCATATGTCAAATTAGTCAATTTGCACAGGACTAATTCATTTAAATATATTAAAATA i macFas5.chr14 C 0 C 0 s macNem1.NW_012010789v1 263322 269 - 11451906 ttttgtacctatgaatgcccaattgctctaggaccagttgttgaaaaagatatccttcctttaaactgttcttgcatccttgt---taaaagatatcagttgaatataatgtggTGTATCACCTTTTAATAAGATAAAAACATTAACACTCACCAGATATCGAAGTTTGGAAATTTTTTTAAAGCCGAACTTCTGAAAATAGAATAAAAACACCTTCATATGTCATATTAGTCAATTTGCACAGGACTAATTCATTTAAATATATTAAAATA i macNem1.NW_012010789v1 C 0 I 141 s chlSab2.chr1 81241273 269 + 126035930 ttttgtacctatgaatgtccaattgctctagcaccatttgttgaaaaagatatccttcctttaaactgtttttgcctccttgt---taaaaatattcagttgaatatagtgtggtctatCACCTTTTAATAAGATAAAAACATTAACACTCACCAGATATCGAAGTTTGGAAATTTTTTTAAAGCCAAACTTCTGAAAATAGAATAAAAACACCTTCATATATCAAATTAGTCAATTTGCAAAGGACTAATTCATTTAAATATATTTAAATA i chlSab2.chr1 I 203 C 0 s colAng1.NW_012116622v1 203986 269 + 3898586 ttttgtacctatgaatgtccaattgctctaggaccatttgttgaaaaaggtatccttcctttaaactgtttttgcatccttgt---taaaagaaatcagttgaatatagtgtggtctatCACCTTTTAATAAGATAAAAACATTAACACTCACCAGATATCGAAGTTTGAAATTTTTTTTAAAGCCAAATTTCTGAAAATAGAATAAAAACAACTTCATATGTCAAATTAGTCAATTTGCACAGGACTAATTCATTTAAATATATTAAAATA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=324354.000000 s hg38.chr14_KI270725v1_random 73756 123 + 172810 CAAAATAATTCAAACCACTAAAGTGATAATACAAGACTATAAATTTAAAGGCTAATTATTAAGTCAAATTGCTGTATTCTACGTGTTAGAGTGAGTTCA-AAAGATCCATTGTATTACTGAATA s panTro5.chrY 310345 123 + 26350515 CAAAATAATTCAAACCACTAAAGTGATAATACAAGACTAAAAAATTAAAGGCTAATTATTAAATCAAATTGCTGCATTCTGCGTGTTAGAATGAGTTCA-AAAGATTCATTGTATTACTGAATA i panTro5.chrY C 0 C 0 s panPan2.chr11 88579969 124 + 134183262 CAAACTAATTCAAACCACTAAAGTGATAATGCAAGACTATAAATTTAAAGGCTAATTATTAAGTCAAACTGCTGTATTCTATGTGTTAGAGTGAGTTCAGAAAGATCCATTGTATTATTGAATA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 25253 123 + 57002 CAAAATAATTCAAACCACTAAAGTGATAATACAAGACTATAAATTTAAAGGCTAATTATTAAGTCAAATTGCTGCATTCTACGTGTTAGAGTGAGTTCA-AAAGATCCATTGTATTACTGAATA i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 34577 124 + 112108 CAAACTAATTCAAAACACTAAAGTGATAATACAAAACTATAAATTTAAAGGCTAATTATTAAGTCAAATTGCTGTATTCTACGTGTTGGAGTGAATTCAGAAAGATCCATTATATTATTGAATA i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82550938 113 + 127894412 CAAAATAATTCAAGCCACTAAAGTGATAATCCAAGACTATAAATTTAAAGACTAATTATTAAGTCAAATTGCTGTATTCGATGT----------GTTCAGAAAGATCC-TTGTATTATTGAATA i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85838957 113 + 130733371 CAAAATAATTCAAGCCACTAAAGTGATAATCCAAGACTATAAATTTAAAGACTAATTATTAAGTCAAATTGCTGTATTCGATGT----------GTTCAGAAAGATCC-TTGTATTATTGAATA i macFas5.chr14 C 0 C 0 s chlSab2.chr1 81241542 124 + 126035930 CAAAATAATTCAAGGCACTAAAGTGATAATCCAAGACTATAAATGTAAAGACTAATTATTAAGTCAAATTGCTGTATTCTATGTGTTAGAGTGAGTTCAGAAAGATCCATTGTATTATTGAATA i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 204255 114 + 3898586 CAAAATAATACAAGTCACTAAAGTGATAATCCAAGACTATAAATTTAAAGACTAATAATTAAGTCAAATTGCTGTATTCTATGT----------GTTCAGAAAGATCCATTGTATTATTGAATA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 263591 141 - 11451906 I a score=266120.000000 s hg38.chr14_KI270725v1_random 73879 71 + 172810 GGCAAAAGTTTTAATTTCAGAGAATGAAACTGATATATTACTGCCACCTTGTGGATATTCTGTTATTACAG s panTro5.chrY 310468 71 + 26350515 GGCGAAAGTTTTAATTTCAGAGGATGAAACTGATATATTACTGCCACCTGGTGGATATTCTTTTATTACAG i panTro5.chrY C 0 C 0 s panPan2.chr11 88580093 71 + 134183262 GGCAAAAGTTTTAATTTCAGAGGATGAAACTGACATATTACTGCCACCTTGTGGATATTCTGTTATTACAG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 25376 71 + 57002 GGCAAAAGTTTTAATTTCAGAGGATGAAAGTGATATATTACTGCCACCTTGTGGATATTCTGTTATTATAG i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 34701 69 + 112108 GGC--AAGTTTTAATTTCAGAGGATGAAACTGATATATTACTGCCACCTTGTGGATATTCTGTTATTATAG i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82551051 71 + 127894412 GGCAAAAGTTTTAATTTCAGAGGATGAAACTGATATATTACTGCCACCTTGTGGATATTCTCTTATTACAG i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85839070 71 + 130733371 GGCAAAAGTTTTAATTTCAGAGGATGAAACTGATATATTACTGCCACCTTGTGGATATTCTCTTATTACAG i macFas5.chr14 C 0 C 0 s macNem1.NW_012010789v1 263732 69 - 11451906 GGCAAAAG-TTTAATTTCAGAGGATGAAACTGATATATTACTGCCACC-TGTGGATATTCTCTTATTACAG i macNem1.NW_012010789v1 I 141 I 218 s chlSab2.chr1 81241666 71 + 126035930 GGCAAAAGTTTTAATTTCAGAGAATGAAACTGATATAGTACTGCCACCTTGTGGATATTCTCTTATTACAA i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 204369 71 + 3898586 GGCAAAAGTTTTAATTTCAGAGGATGAAACTGATATATTACTGCCACCTTGTGGATATTCTCTTATTACAG i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=2083809.000000 s hg38.chr14_KI270725v1_random 73950 742 + 172810 GCTATTATAAAAAGCAATAAGGGTATGTAATCTGTTCTAACAAGAAGCGTTTCCTTTTTTTGTCGCTT-------------TTATTATTGttattattacgttttaagttctgagatacatgtacataacgtggaggtttgttacgtaggtatacacatgccatggtggtttactgcacccatcaacccatcatctacattaggtatttctcctaatgctatcact--------ccccgagcctcccacccccctgacaggcgccggtatgtgatgttcccctccctgtgtccatgtgttctcattgttcaactcAAAAGAAAAA----------C-AGAAGCATTTTCTGCTTTCCTAATTTCTTAAATACAATGCAACTTTATG----------TTTAATTTAA------CTAACTTAA-ttttttgagacaaggtctagctctgttgcccaggctggagtggagtggcgtgaatatggttcagtgaaacctccacctccctggctcaagtgatcctccttcttaagcctctcgagtagctaggaccacaggcac-gcaccaccatggccagctaatttcttttttattttttatagagatgaggtctcactttgttgtccacgctggtctcaaactcctgggctcaaaggatcctcttgccatggccttccacagcgctgggatttataggtgtgtgccat-ggcaccaggccTAAGCAACTGTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGAATTTATTTGTGGT s panTro5.chrY 310539 742 + 26350515 GCTATTATAAAAATCAATGAGGGCATGTAATCTGTTCTAACAAGAAGCATTTCCTTTTTTTGTCATTT-------------TTATTAttgttattattactttttaagttctgagatacatgtatggaacgtggagatttgttacataggtatacacatgccatggtggtttactgcacccatcaacccatcatctacattaggtatttctcctaatgctatcact--------cccccagcctcccacccccctgacaggtcccggtatgtgatgtt-ccctccctgtgtccatgtgttctcattgttcaactcAAAAGAAAAA----------C-AGAAGCATTTTCTGCTTTCCCAATTTCTTAAATACAATGCAACTTTATG----------TTTAATTTAG------CTAACTTAA-ttttttgagacaaggtctagctctgttgcccaggctggagtggagtggcatgaatatggttcagtgaaacctccacctccctggctcaagtgaccctccttcctcagcctctggagtagctaggaccacaggcacggcaccactatggccagctaatttcttttttattttttgtggagatgaggtctcactttgttgtccactctggtctcaaactcctgggctcaaaggatcctcttgccatggcctgcaacagtgctggcatttataggtgtgtgccat-ggcaccaggccTAAGCAACTGTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGAATTTATTTGTGGT i panTro5.chrY C 0 C 0 s panPan2.chr11 88580164 739 + 134183262 GCTATTATAAAAAGCAATGAGGGTATATAATCTGTTCTAACAAGAAACATTTCCTTTTTTTGTCATTT-------------TTATTATTAttatcattacattttaagttctgagatacatatacagaacgtggaggtttgttacataggtatacacgtgccatggtggtttactgcacccatcaacccatcatctacattaggtatttctcctaatgctatcact--------cccccagcccccca-ccccctgacaggccccagtgtgtgatgttcccctccctgtgtccatgtgttctcattgttcaactcAAAAAAAAAA------------AGATGCATTTTCTGCTTTCCCAATTTCTTAAATGCAGTGCAACTTTATG----------TTTAATTTAA------CTAATTTAA-ttttttgagacaaggtctagctctgttacctaggctggagtggagtggcatgaatatggttcagtaaaacctccacctccctggctcaagtgatcctcctttctcagcctcctgagtagctaggaccacaggcat-gcgccaccatagccagctaatttctttttc-ttttttgtagagttgaggtctcactttgttgtccaagctggtctcaaactactgggctcaaaggatcctcctgccatggcctcccaaagtgcttggatttatgggtgtgtgccat-agcaccaggccTAAGCAACTTTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGAATTTATTTGTGAT i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 25447 741 + 57002 GCTATTATAAAAAGCAATGAGGATATGTAATCTGTTCTAACAAGAAGCATTTCCTTTTTTTGTCGTTT-------------TTATTATTGttattattacattttaagttctgagatacatgtacagaacgtggaggtttgttacataggtatacatatgccatggtggtttactgcacccatcaacccatcatctacattaggtatttctcctaatgctatcact--------ccccaagcctcccacccccctgacaggccccggtatgtgatgttcccctccctgtgtccatgtgttctcattgttcaactcAAAAGAAAAA----------C-AGAAGCATTTTCTGCTTTCCCAATTTCTTAAATACAATGCAACTTTATG----------TTTAATTTAA------CTAACTTAA--tttttgagacaaggtctagctctgttgcccaggctggagtggagtggcgtgaatatggttcagtgaaacctccacctccctggctcaagtgatcctccttcctcagcctctcgagtagctaggaccacaggcac-gcaccaccatggccagctaatttcttttttattttttgtagagatgcggtctcactttgttgtccacgctggtctcaaactcctgggctcaaaggatcctcttgccatggcctcccacagcgctgggatttataggtgtgtgccat-ggcaccgggccTAAGCAACTGTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGAATTTATTTGTGGT i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 34770 746 + 112108 GCTATTATAAAAAGCAATGAGGATATGTAATCTGTTCTAACAAGAAGCATTTCCTTTTTTTGTCATTT----------TTATTATTATTAttattattacattttaagttccgagatacatgtacagaacgtggaggtttgttacataggtatacacgtgccatggtggtttactgcacccaacaacctatcatctacgttaggtattactcctaatactatcact--------cccccagcccccca-ccccctgacaggccccggtgtgtgatgttcgcctccctgtgtccatgtgttctcattgttcaactcaaaaaaaaaa------aaaaa-agaaGCATTTTCTGCTTTCCCAATTTCTTAACTACAATGCAACTTTATG----------TTTAATTTAA------CTAATTTAAtttttttgagacaaggtctagctctgttgcccaggctggagtggagttgcgtgaatatggttcagtgaaacctccacctccctggctcaagtgatcctccttcctcagcctcccgagtagcgagggccacaggcgt-gcaccacaatagcctgctaatttctttttt-ctttttttagagatgaggtctcactttgttgtccacgctggtctcaaactacagggctcaaaggatcatcctgccatggcctcccaaagtgcttggatttataggtgtgtgccat-agcaccaggACAAAGCAACTT--GAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGAATTTATTTGTGAT i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82551122 764 + 127894412 GCTATTA-AGAAAGCAATGAGGGTATGTTATCTATTCTAACAGATAACATTGTC----TTTGTTGTttattattattattattattattattactattaCattttaagttctgggatacatgtacagaacatggaggtttgttacataggtatacacatgccatggtggtttgctgcacccatcaacccgtcatctgcattagatatttctcctaatgctatcact--------cccccaaccctcca-ccccctgacaggccccagtgtgtgatgtccccctgcctgtgttcatgtgttctcactgttcaactcAAAAATAAAAATAATAATAAA-AAAAGCATTTTCTGCTTTCCCAATTTCTTAAATACAGTGCAATtttata----------tttaatttaatttaatttaatttaa-ttttttgagacaaggtctagctctattgcccaggctacagtggagtggcgtgaatatggttcagtgaaacctccacctccctggctcaagtgatcctccttcctcagcctcccgagtagctaggaccacaggcat-gcgccaccatggccagctaatttcttttttattttttgtagagatgagttctcactttgttgtccacact-gtctcaaactcctgggctcaagggatcctcctgccatggcctcccacagtgctgggctttataggtgtgagccat-ggcaccAACCCTATGCAACTTTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGGATTTATTTGTGGT i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85839141 764 + 130733371 GCTATTA-AGAAAGCAATGAGGGTATGTTATCTATTCTAACAGATAACATTGTC----TTTGTTGTttattattattattattattattattactattaCattttaagttctgggatacatgtacagaacatggaggtttgttacataggtatacacatgccatggtgttttgctgcacccatcaacccgtcatctgcattagatatttctcctaatgctatcact--------cccccaaccctcca-ccccctgacaggccccagtgtgtgatgttcccctgcctgtgttcatgtgttcgcactgttcaactcaaaaataaaaataaaaataaa-aaaaGCATTTTCTGCTTTCCCAATTTCTTAAATACAGTGCAATTTTATG----------tttaatttaatttaatttaatttaa-ttttttgagacaaggtctagctctattgcccaggctacagtggagtggcgtgaatatggttcagtgaaacctccacctccctggctcaagtgatcctccttcctcagcctcccgagtagctaggaccacaggcat-gcgccaccatggccagctaatttcttttttattttttgtagagatgagttctcactttgttgtccacact-atctcaaactcctggactcaagggatcctcctgccatggcctcccacagtgctgggctttataggtgtgagccat-ggcaccAACCCTATGCAACTTTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGGATTTATTTGTGGT i macFas5.chr14 C 0 C 0 s chlSab2.chr1 81241737 796 + 126035930 GCTATTATAAAAAGCAATGAGGGTATGTTACCTGTTCTAACAGATAACATTGTC----TTTGTTGTTT-------------TTATTATTAttattactacattttaagttctgggatacatgtacagaacatggaggtttgttacataggtatacacatgccatagtggtttgctgcacccatcaatccgtcatctacattaggtatttttcctaatactatcactcccccagccccccagcccccca-ccccctgacaggccccggtgtatgatgttcccctccctatgttcatgtgttctcattgttcaactcAAAA--AAAAATTTTTAAAAA-GGAAGCATTTTCTGCTTTCCCAATTTCTTAAATACAATGCAACTTTATGtttaatttaatttaatttaatttaatttaatttaa-ttttttgagacaaggtctagctctattgcccaggctggagtggagtggcatcaatatggttcaatgaaacctccacctccctggctcaagtgatcctccttcctcagcctcccgagtagctaggaccacaggcac-acaccacgatggccagctaatttcttttttattttttgtagagatgaggtctcactttgttgtccacactggtctcaaactcctgggctcaaaggatcctcctgccgcagactcccaaagtgctgagatttataggtgtgagccatgggcaccaggccTATGCAACTTTAGAGAAGCCTTTTTTTCTTGCATAAAAAGTTGTGGATATTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTACGGAATTTATTTGTGGC i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 204440 757 + 3898586 GCTACTA-AGAAAGCAATGAGGGTATGTTATCTATTCTAACACATAACATTGTC----TATGTCatt----attattattattattattattattattaCattttaagttctgggatacatgtacaggacatggaggtttgttacataggtatacacgtgccatggtggtttgctgaacccatcaacccatcatctacattaggtatttctcctaatgctatcact--------cccccaaccctcca-ccccctgacaggccccagtgtgtgatgttcccctccctgtgttcatgtgttctcactgctcaactcAAAAATAAAAATTAAAAAAAACAGAAGCATTTTTTGCTTTCCCAATTTCT----TACAGTGCAATTTTATG----------tttaatttaatttaatttaatttaa-ttttttgagacaaggtctagctctgttgcccaggctacagtggagtggcgtgaatatggttcagtgaaacctccacctccctggctcaagtgatcctccttcctcagcctcccgagtagctaggaccacaggcat-gcaccatcatgaccagctaatttgttttttattttttgtagggatgaggtctcactttgttgtccacact-gtctcaaactcctgggctcaagggatcctcctgccatggcctcccacagtgctgggatttataggtgtgagccat-ggcaccagcccTATGCAACTTTAGAGAAGCCTTT--------------------------TTTTCTTTCATAAAAACAGTTGTAGATATTTTCCTTATGGGATTTATTTGTGGT i colAng1.NW_012116622v1 C 0 I 182 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 263801 218 - 11451906 I a score=14172.000000 s hg38.chr14_KI270725v1_random 74692 18 + 172810 GAAATAT--------------TTTAATAGACA s panTro5.chrY 311281 18 + 26350515 GAAATAT--------------TTTAATAGACA i panTro5.chrY C 0 C 0 s panPan2.chr11 88580903 18 + 134183262 AATATAT--------------TTTAATAGATG i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 26188 17 + 57002 GAAATAT--------------TTTAATAGAC- i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 35516 18 + 112108 AATATCT--------------TTTAATAGATG i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82551886 32 + 127894412 Aatatatataatatataatactatattatatt i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85839905 32 + 130733371 Aatatatataatatataatattatattatatt i macFas5.chr14 C 0 C 0 s chlSab2.chr1 81242533 18 + 126035930 AATATAT--------------TTTAACAGATG i chlSab2.chr1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e colAng1.NW_012116622v1 205197 182 + 3898586 I e macNem1.NW_012010789v1 263801 218 - 11451906 I a score=55710.000000 s hg38.chr14_KI270725v1_random 74710 18 + 172810 ATTTAATTTGTTAAATAA s panTro5.chrY 311299 18 + 26350515 GTTTAATTTGTTAAATAA i panTro5.chrY C 0 C 0 s panPan2.chr11 88580921 18 + 134183262 GTTTAATTTGTTAAATAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 26205 18 + 57002 GTTTAATTTGTTAAATAA i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 35534 18 + 112108 GTTTAATTTGTTAAATAA i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82551918 18 + 127894412 atttaATTTGTTAAATAA i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85839937 18 + 130733371 atttaatttgttaaataa i macFas5.chr14 C 0 C 0 s chlSab2.chr1 81242551 18 + 126035930 CTTTAATTTGTTAAATAA i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 205379 18 + 3898586 atttaatttgttaaataa i colAng1.NW_012116622v1 I 182 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 263801 218 - 11451906 I a score=1843255.000000 s hg38.chr14_KI270725v1_random 74728 493 + 172810 TTTGTCTCAGATAATAATAATTGATTAATATTAAAACTACAAAACAAGTAGGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTATGTAAACATTTTAAATATTCAAAGTATAT------------------------AAATGTgaagtcctatcaagagtaattagacaagagaaagaaataaagggcattcagatcggaaaggaggacatcaaattgttcctatttgcagatgacatgatcttatatataggaaaacctgaagactctaccagaaaacttttagaacaaacaaattcaatgaagttgcaagacacaaaactaatacacaaagattggttgcatttatatttatgaacaacaaactcgctgaaaaagaaattaagaaggcaaacccatttacaatactt---------accaaaa---ataa--cccagacataaatgtaaccaaggaggtaaaatgaaaactacaaaacactaatgaaagaaattgaagaggatacaaacaaatgaaaa s panTro5.chrY 311317 493 + 26350515 CCTGTCTCAGATAATAATAATTGATTAATATTAAAACTACAAAATAAGTCTGGTCTTCTTTTTCTATGAAAACTGAAAGTTGATTCTGACATTTATGTAAACATTTTAAAtattc-aattatat------------------------aaatgtgaagtcctatcaagagaaattagacaagagaaagaaataaagggcattcaaatcggaaaggaggacatcaaattgttcatatttgcagatgacatgatcttatatataggaaaacctgaagactctaccagaaaacttttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacagaaagattggttgcatttatgtatatgaacaacaaactcgctgaaaaagaaattaagaaggtaaacccatttacaatagtt---------accaaaa--gaaaa--cccagacataaatgtaaccaaagaggtaaaatgaaaactacaaaacactaattaaagaaattgaagaggatacaaacaaatgaaaa i panTro5.chrY C 0 C 0 s panPan2.chr11 88580939 493 + 134183262 CTTGTCTCAGATAATAATAATTAATTAATATTAAAACTACAAAACAGGCAGGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATCTATGTAAACATTTTAAGTATTCAAAGTATAT------------------------AAATGTgaagtcctatcaagagtaattagacaagagaaagaaataaagggcattcaaattggaaaggaggatgtcaaattgttcctgtttgcaggtgacatgatcttatatataggaaaacctgaagactctaccagaaaacttttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacacaaaaattggtggcatttatatatatgaacaacaaactagctgaaaaagaaatcaagatggcaaacctatttacaatagtt---------accaaaa---aaaa--cctagacataaatgtaaccaaggaggtaaaatgaaaactacaaaataccgatgaaagaaattgaagaagatacaaataaatgaaaa i panPan2.chr11 C 0 I 142 s gorGor5.CYUI01002012v1 26223 491 + 57002 TTTGTCTCAG---ATAATAATTGATTAATATTAAAA-TACAAAACAAGTAGTGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTATGTAAACATTTTAAATATTCAAAGTATAT------------------------AAATGTgaagtcctatcaagagtaattagacaagagaaagaaataaagggcattcaaatcggaaaggaggacatcaaattgttcctatttgcagatgacatgatcttatatataggaaaacctgaagactctaccagaaaacttttagaacaaacaaattcagtgaagttgcaaaacacaaaactaatacacaaagattggttgcatttatatatatgaacaacaaactcgctgaaaaagaaattaagaaggcaaacccatttacaatagtt---------accaaaaaaaaaaa--cccagacataaatgtaaccaaggaggtaaaatgaaaactacaaaacactaatgaaagaaattgaagagga-acaaacaaatgaaaa i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 35552 494 + 112108 TTTGTCTCAGATAATAATAATTGATTAATATTAAAACTACAAAACAAATAGTGTCTTCTTTTACTATGAAAAATGAAAGTTGATTCTGACATATATGTAAACATTTTAAAtattcaaagtatat------------------------aaatgtgaagtcctatcaagagtaattagacaagagtaagaaataaagggcattaaaactggaaaggaggacatcaaatttttcctgtttgcagatgacatgatcttatatatagaaaaacctgaagactctaccagaaaacttttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacacaaaaattggtagcatttatatctatgaa-aacaaactagctgaaaaagaaatcaagaatgcaaacctatttagagtagtt---------accaaaa-aaaaaa--cctagacataaatgtaaccaaggaggtaaaatgaaaacaacaaaacactgatgaaagacattgaagaagatacaaacaaatgaaaa i nomLeu3.chrUn_GL397743_2 C 0 I 134 s rheMac8.chr14 82551936 495 + 127894412 TTTGTCTCAGATAATAATAATTGATTAATATTAAAACTGCAAATCAAGTATGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTATGTAAACATTTAAAATATTCAAAGTATAT------------------------AAATGTggagtcctatcaagagtaattagacaagagaaagaaataaagggcattcaaattggaaagaaggacatcaaattgttcctgtttgcagatgacatgatcttatatataggaaaatctgaagactctaccagaaaacttttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacacaaaaattggtagcatttctatatatgaacaacaaactagctgaaaaagaaatcaagaaggcaaacccatttacaatagtt---------accaaaa-agaaaa--cctagacataaatgtagccaaggaggtaaaatgaaaactataaaacactgatgaaagaaattgaagaggatacaaacaaatgaaaa i rheMac8.chr14 C 0 C 0 s macFas5.chr14 85839955 495 + 130733371 tttgtctcagataataataattgattaatatTAAAACTGCAAATCAAGTATGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTATGTAAACATTTAAAATATTCAAAGTATAT------------------------AAATGTggagtcctatcaagagtaattagacaagagaaagaaataaagggcattcaaattggaaagaaggacatcaaattgttcctgtttgcagatgacatgatcttatatataggaaaatctgaagactctaccagaaaacttttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacacaaaaattggtagcatttctatatatgaacaacaaactagctgaaaaagaaatcaagaaggcaaacccatttacaatagtt---------accaaaa-agaaaa--cctagacataaatgtagccaaggaggtaaaatgaaaactataaaacactgatgaaagaaattgaagaggatacaaacaaatgaaaa i macFas5.chr14 C 0 C 0 s macNem1.NW_012010789v1 264019 495 - 11451906 TTTGTCTCAGATAATAATAATTGATTAATATTAAAACTGCAAATCAAGTATGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTATGTAAACATTTAAAATATTCAAAGTATAT------------------------AAATGTggagtcctatcaagagtaattagacaagagaaagaaataaagggcattcaaattggaaagaaggacatcaaattgttcctgtttgcagatgacatgatcttatatataggaaaatctgaagactctaccagaaaactgttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacacaaaaattggtagcatttctatatatgaacaacaaactagctgaaaaagaaatcaagaaggcaaacccatttacaatagtt---------accaaaa-agaaaa--cctagacataagtgtagccaaggaggtaaaatgaaaactatacaacactgatgaaagaaattgaagaggatacaaacaaatgaaaa i macNem1.NW_012010789v1 I 218 C 0 s chlSab2.chr1 81242569 530 + 126035930 CTTGTCTCAGATAATAATAATTGATTAATATTAAAACTACAAACCAAGCAGGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTACATAAACATTTTAAATATTCAAAGTATATTTGAATATTTACAAAGTATATTTGAAATGTgaagtcctatcaagtgtaattagacaagagaaagaaataaagggcattcaaattggaaaggaacacatcaaatttttcctgtttgcagatgacatgatcttatatataggaaaacctgaagactgtaccagaaaacttttagaacaaacaaattcagtgaagctgcaagacacaaaactaacacacaaaagctagtagcatttctatatatgaataataaactagctgaaaaagaaatcaagaagccaaacccatttataatagttacaaaaaaaaccaaaa-aaaaaaaccctagacataaatgtaaccaaggaggtaaaatgaaaactacaaaacactgatgaaagaaattgaagaggatacaaacaaatgaaaa i chlSab2.chr1 C 0 C 0 s colAng1.NW_012116622v1 205397 495 + 3898586 tttgtctcagataataataattgattaatattaAAACTGCAAATCAAGTAGGGTCTTCTTTTTCTATGAAAAATGAAAGTTGATTCTGACATTTACGTAAACATTTAAAATATTCAAAGTATAT------------------------AAATGCAGagtcctatcaagggtaattagacaagagaaagaaataaagggcattcaaattggaaagaaggacatcaaattgttcctgtttgcagatgacatgatcttatatataggaaaacctgaagactctaccataaaacttttagaacaaacaaattcagtgaagttgcaagacacaaaactaatacacaaaaattggtagcatttctatatatgaacaacaaactagctaaaaaagaaatcaagaaggcaaacccatttacaatagtt---------gccaaaa-agaaaa--cctagacataaatgtagccaaggaggtaaaatgaaaactacaaaacactgatgaaagaaattgaagaggatacaaacaaatgaaaa i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=1269791.000000 s hg38.chr14_KI270725v1_random 75221 347 + 172810 gacattcacactcatggatcagaaatatgaatgttgttaaagtgacagtactactcaaaagtaacctacagattcaatgcaatctctatcaaaatacctatgaacattcttcacaaaa------taaaaaaaaatccaaagagattttatggaatcaaaaaatatcctgaatagccaaagccatcctaagcaaaaagaacaaagctggatgtatcatgctaccagacctcagaatatactacaaaactgtagtaaccaaaacatcatggtattggcataaaaacagacacatagacctatggaatagaataaagaacccagaaaatccacatatctcagccaacagatttttt s panTro5.chrY 311810 347 + 26350515 gacattcacactcattcatcagaaatatgaatgttgttaaagtgacagtactactcaaaagcaacctgcaaattcaatgcaatctctatcaaaatacctatgaacattcttcacaaaa------ttaaaaaaaatccaaagagattttatggaatcaaaaaatatcctgaagagcaaaagccaccctaagcaaaaagaacaaagctggatatatcatgctaccagacctcagaatatacttcaaaactgtagtaaccaaaacatcatggttttggcataaaaacagacacaaagacctatggaatagaataaagaacgcagaaaatccacatatctcagccaacggatttttt i panTro5.chrY C 0 C 0 s panPan2.chr11 88581574 346 + 134183262 gacattcatgctcatggatcagaaatactaatgttgttaaagtgacagtac-actcaaaagcaacctacagattcaatgcaatctctatcaaaataccaatgaatatttttcacaaaat-----taaaaaaaaatccaaagagattgtatggaatc-aaaagtatcctcaatagccaaagcaatcctaagcaaaaagaacaaagctggatgtatcatgctaccagacctcagaatacactacaaagctgtagtaaccaaaacatcatggtattggcataaaaacagacacatagacctatggaatagaataaagaacccagaaaatccacatatctcaggcaattgatttttt i panPan2.chr11 I 142 C 0 s gorGor5.CYUI01002012v1 26714 348 + 57002 gacattcacactcatggatcagaaatatgaatgttgttaaagtgacagtactactcaaaagcaacctacagattcaatgcaatctctatcaaaatacctatgaacattcttcacaaaat-----taaaaaaaaatccaaagagattttatggaatcaaaaaatatcctgaatagccaaagccatcctaagcaaaaagaacaaagctggatgtatcatgctaccagacctcagaatatactacaaaactgtagtaaccaaaacatcatggtattggcataaaaacagacacatagacctatggaatagaataaagaacccagaaaatccacatatctcagccaacggatttttt i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 36180 348 + 112108 gacattcatgctcatggatcagaaacactaatgttgttaaagtggcagtactactcaaaagcaacctacagattcaatgcaatctctatcaaaataccaatgaacattcttcacaaaat-----ttaaaaaaaatccaaagagattgtatggagtcaaaaaatatcctgaatagccaaagcaatccttagcaaaaagaacaaagctggatgtatcatgctaccagacttcagaatatactacaaagctgtagtaaccaaaacatcatggtcttggcataaaaacagacacacggacctatggaacagaataaagaacccagaaaatccacatatctcagccaattgatttttt i nomLeu3.chrUn_GL397743_2 I 134 C 0 s rheMac8.chr14 82552431 349 + 127894412 gacattcatgctcatggatcagaaatactaatgttgttaaagtaacagtactactcaaaagcaacctacagattcaatgcaatctctatcaaaataccaatgaaaattcttcccaaaat----aaaaaaaaaaatccaaagagattgtatggaatcaaaaaagaccctgaatagccaaagcaatcctaagcaaaaagaactaagctggacatatcatactaccagacctcagaatatactacaaagctgtagtaaccaaaacatcatgatattggcataaaaacagacacataaacctatgaaatagaataaagaacccagaaaacccacatatctcagccaactgatttttt i rheMac8.chr14 C 0 I 34 s macFas5.chr14 85840450 352 + 130733371 gacattcatgctcatggatcagaaatactaatgttgttaaagtaacagtactactcaaaagcaacctacagattcaatgcaatctctatcaaaataccaatgaaaattcttcccaaaat-aaaaaaaaaaaaaatccaaagagattgtatggaatcaaaaaagaccctgaatagccaaagcaatcctaagcaaaaagaactaagctggacatatcatactaccagacctcagaatatactacaaagctgtagtaaccaaaacatcatgatattggcataaaaacagacacataaacctatgaaatagaataaagaacccagaaaacccacatatctcagccaactgatttttt i macFas5.chr14 C 0 I 34 s macNem1.NW_012010789v1 264514 351 - 11451906 gacattcatgctcatggatcagaaatactaatgttgttaaagtaacagtactactcaaaagcaacctacagattcaatgcaatctctatcaaaataccaatgaaaattcttcccaaaat--aaaaaaaaaaaaatccaaagagattgtatggaatcaaaaaagaccctgaatagccaaagcaatcctaagcaaaaagaactaagctggacataccatactaccagacctcagaatatactacaaagctgtagtaaccaaaacatcatgatattgacataaaaacagacacataaacctatgaaatagaataaagaacccagaaaacccacatatctcagccaactgatttttt i macNem1.NW_012010789v1 C 0 I 34 s chlSab2.chr1 81243099 353 + 126035930 tacattcatgcttatggatcagaaatactaatgtagttaaagtagcagtactactcaaaagcaacctacaggttcaatgcaatctctgtcaaaataccaatgaacattcttcacaaaataaaaaaaaaaaaaaatccaaagagattgtgtggaatttaaaaagaccctgaatagccaaagcaatcctaagcaaaaagaacaaagcaggacatatcatgctaccagacctcagaatatactacaaagctgtagtaaccaaaacatcatggtattggcataaaaagagacacacagacctatgaaatagaaaaaagaacccagaaaacctacatatctcagccaactgatttttt i chlSab2.chr1 C 0 N 0 s colAng1.NW_012116622v1 205892 345 + 3898586 gacattcatgctcatggatcagaaatactaatgttgttaaagtaatagtactactcaaaagcgacctacagattcaatgtaatctctatcaaaacaccaatgaaaattcttccca--------aaaaaaaaaaattcaaagagattgtatggaatcaaaaaacaccctgaatagccaaagcaatcctaagcaaaaagaactaagctggacatgtcatgctaccagacctcagaatatactataaagttgtagtaaccaaaacatcatggtattggcataaaaacagacacataaacctatgaaatagaataaagaacccagagaacccacatatctcagccaactgatttttt i colAng1.NW_012116622v1 C 0 I 35 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=2960074.000000 s hg38.chr14_KI270725v1_random 75568 1000 + 172810 acaaag-------atgccaagaacactcattgggaaaaggatagtctcttcaataaatggtgctggaaaaactggatatccatatgcagaagaatgaaactagacctctgcctctcaccctatacaaaaatcaactcaaagtacctcaaatacccaaatataagacccaaaatggtaaagctactagaagaaaacataggggagatccttcaggacattgctctgggaaaatattttatgaataaggcatcaaaagcacaggcaacaaaagaaaaaa-taaacaaatgggatcacatcaagctaaaaatcttctgcacagcaaaggaaataataaagtgagtgaaaagacaacctacagaatgggagaaaatataa---actcatctggcaggaaattaatatcaagaatatacaaggaattcaaacatatcaacagcaaagaagcacaacaatctaattaaatataaacaaatgctctgaacagacatttctcaaaagaagacatacaaatgaccaacaaatatatgaaaaaatgttcaacaccactaatcagcaaggaaatgctaatcaaagccacagtgaggcatcatcttactccagttaggatggctattatagaagagacaaaaataacaaatgctgacaaagacgtgaagaaaagggaC----------------------------Ctttttttgacagaatctcactctctgtccaggctggagtgcagtggtggtgtaatctggctccctctgcttctagggttcaaatagttctcctccctcagcctcctgagtagctgaagaaaaaggaactcttatgcactgttggtaggaatgtaaattagtgcagccagtatggagaacagtattgaaacacctcaagcaatcccactactgggaatttatccaaaggaaagaaaagcattatattgcagagacatctacatcccccatgtttattgcaacagtgttcacaatagccaagatatggaatcaacctaggtttccaacaacagaggaatggatttt s panTro5.chrY 312157 1000 + 26350515 acaaag-------atgtcgagaacactcattggggaaaggatagtctcttcaataaatggtgctgggaaaactagatatccatatgcagaagaatgaaactaaacctctgcctctcaccctataaaaaagtcaactcaaagtatctcaaatacccaaatataagacccaaaatggtaaagatactagaagaaaacataggggagatccttcaggacattgctctggtaaaatattttatgaataaggcatcaaaagcacaggcaacaaaagaaaaaa-taaacaaatgagatcacatcaaggtaaaaatcttctgcacagcaaaagaaataataaagtgactgaaaagacaacctacagaatgggagaaaatataa---actaatctgacaggaaattaatatcaagcatatacaaggaattcaagcatatcaacagcaaataagcacaacaatctaattaaatataaataaatgctctgaacagacatttctcaaaagaagacatacaaatgaccaacaaatatatgaaaaaatgttcaacaccactaaacagcaaggaaatgttaatcaaagccacagtgaggcatcatcttactccagttaggatggctattacagaagagacaaaaataacaaatgctgacaaagatgtgaagaaaagggaC---------------------------Attttttttgacagaatctcactctccgtccaggctagagtgcagtggtggtgtaatctggctccctctgcttctaggtttcaaatagttctcctccctcagcctcctgagtagctggagaaaaaggaactcttatgcactgttggtaggaatgtaaattagtgcagccagtatggagaacagtattgaaacacctcaagaaatcccaccactgggaatttatccaaaggaaagaaaagcattatattgcagagacatctgcat-ccccatgtttattgcaatagtgttcacaatagccaagatatggaatcaaccttggtttccaacaacagatgaatggatttt i panTro5.chrY C 0 C 0 s panPan2.chr11 88581920 998 + 134183262 acaaag-------atgccaagaacactcattggggaaaggatagtctcttcaataaatggtgcttggaaaactggatatccaaatgcagaaggatgaaactagacccctgcctctcaccctatacaaaaatcaactcaaagtatctcaaataccgaaatataagacccaaaatggtaaagctactagaagaaaacataggggagatccttcaggacattgctctgggaaaagattttatgaataaggcatcaaaagcacaggcaacaaaagaaaaag-taaacaaatgggatcacatcaagctaaaaagcttctgcacagcaaaggaaataatgaagtgagtgaaaagacaacctacagaatgggagaaaatataaactactcatctggcaggaaattaatatcaagaatatacaaggaattcaaacatatcaacagcaaagaaacccaacaatctaattaaatataagcaaatgctctgaacagacatttctcaaaagaagacatacaaatgaccaacaaatttatgaaaaaatgttcaacaccactaatcagcagggaaatgctaatcaaagccacaatgaggcatcatctcaccccagttaggatggctattatagaagagacaaaaat---aaatgctggcaaagatgtgaagaaaagggaC--------------------------ttttttttttgacag--tctcattctccgtccaggctggagtgcagtggtggtgtaacctggctccctctgcttctagggttcaaatagttctcctgcctcagcctcatgagtagctggggaaaaaggaactcttatacactgttggtaggaatgtaaattagtgcagccagtatgttgaacagtattgaaacccctcaagcaatcccactactgggaatttatccaaaggaaa-aaaagcattatgttggagagacatcggcat-ccccatgtttattgcaacagtgttcacaatagccaagatatggaatcaacctaggtttccaacaacagatgaatggatttt i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 27062 998 + 57002 acaaag--------tgccaagaacactcattggggaaaggatagtctcttcaataaatggtgctggaaaaactggatatccatatgcagaagaatgaaactagacccctgcctctcaccctatacaaagatcaactcaaagtatctcaaataccgaaatataagacccaaaatggtaaagctactagaagaaaacataggggagatccttcaggacattgctctgggaaaatattttatgaataaggcatcaaaagcacaggcaacaaaagaaaaaa-taaacaaatgggatcacatcaagctaaaaatcttctgcacagcaaaggaaataataaagtgagtgaaaagacaacctacagaatgggagaaaatataa---actcatctggcaggaaattaatatcaagaatatacaaggaattcaaacatatcaacagcaaagaagcacaacaatctaattaaatataaacaaatgctctgaacagacatttctcaaaagaagacatacaaatgaccaacaagtatatgaaaaaatgttcaacaccactaatcagcaaggaaatgctaatcaaagccacagtgaggcatcatcttactccagttaggatggctattatagaagagacaaaaataacaaatgctgacaaagacgtgaagaaaagggaC---------------------------ttcttttttgacagagtctcactctccgtccaggctggagtgcagtggtggtgtaatctggctccctctgcttctagggttcaaatagttctcctccctcagcctcctgagtagctggagaaaaaggaactcttatgcactgttggtaggaatgtaaattagtgcagccggtatggagaacagtattgaaac-cctcaagcaatcccactactgggaatttatccaaaggaaagaaaagcattatattgcagagacatctgcat-ccccatgtttattgcaacagtgttcacaatagccaagatatggaatcaacctaggtttccaacaacagatgaatggatttt i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 36528 1002 + 112108 acaaag-------atgccaagaacactcattggggaaaggatagtctcttcaataaatggtgtatggaaaactggatatccaaatgcagaagaatgaaactagaaccctgcctcccaccctataaaaaaatcaactcaaagtatctcaaatacccaagtataaga-ccaaaatggtaaagctacaagaagaaaacataggggagattcttcaggacattgttctgggaaaagattttatgaataaggcatcaaaagcacaggcaacaaaagaaaaag-caaacaaatgggatcacatcaagctaaacagcttctgcacagcaaaggaaataataaagtgagtgaaaagacaacctacagaatgggagaaaatataaactactcatctggcaggaaattaatatcaagaatatacaaggaattcaaacatatcaatagcaaagaaacccaacaatctaattaaatataagcaaatgctctgaacagacatttctcaaaataagatatacaaatgaccaacaaatagatgaaaaaatgttcaacaccactaatcagcaggaaaatgctaatcaaagccacaatgaggcaacatctcaccccagttcggatggctattatagaagagacaaaaat---aaatgttggcaaagatgtgacgaaaagggaCttt----------------------tttttttttttgacag--tctcattctccatccaagctggagtgcagtggtggtgtaatctggttccctctgcttctagggttcaaatagttctcctgcctcagcctcctgagtagctggggaaaaaagaactctcatacagtgttggtaggaatgtacattagtgcagccagtatggagaacagtattgaaacccctcaagcaatcccactactgggaatttatccaaaggaaagaaaagcattgtattggagagccatcagcat-ccccatgtttattccaacagtattcacaatagccaagatatggaatcaacctaggtttccaacaacagatgaatggatttt i nomLeu3.chrUn_GL397743_2 C 0 C 0 s rheMac8.chr14 82552814 1032 + 127894412 acaaagatgccagatgccaacaacactcattggggaa-----agtctcttcaataaatagtgctgggaaaactggatatccatctgcagaagaatgaaattagacccctgcctctcaccctatacaaaaatcatctcgaagtgtctcaaatacccaaatataacacccaaaatggtagagctactagaagaaaacataggggagattcttcagggcattggtctgggaaaagattttatgaataagacatcaaaagcacaggcaacaaaagaaaaaa-taaacaaactggatcacattgagctaaaaagcttctgcacagcaaaggaaataataaagtaagtgaaaagacaatgtacagaaggggagaaaatataaactactcatctggcaggaaattaatatcaagaatatacaaggaattcaaacaaatcaacagcaaagaaacccaacaatctaattaaatataagcaaatgctctgaacagacatttctcaaaagaagacatacaaatcaccaagaaatatatgaaaaaatgttcaacaccactaatcagcaggaaaatgctaatcaaagccacaatgaggcatcatctcaccccagttaggatggctattatagaagagactaaaataacaaatgctggcaaaaatgtgaagaaaagggaCtttcttctttttctttttttttttttttttttttttttttgagtctcactctccgtccagggtggagtgcagtggaggtgtaatcttgctccctctgcctctaggtttcaaatagttctcctgcctctgcctcctgagtagctggggaaaaagtaactcctatacactgttggtaggaatgtaaattagtgcagccactatggagaacagtattgaaacccctcaagcaatcccattactgggaatttatccaaaggaaagaaaagcattatattggagagacatctgcat-ccccatgcttattgcaacactattcataatagccgagatatggaatcaacctaggtttccaacaacagatgaatggatttt i rheMac8.chr14 I 34 I 29577 s macFas5.chr14 85840836 1032 + 130733371 acaaagatgccagatgccaagaacactcattggggaa-----agtctcttcaataaatagtgctgggaaaactggatatccatctgcagaagaatgaaattagacccctgcctctcaccctatacaaaaatcaactcgaagtgtctcaaatacccaaatataacacccaaaatggtagagctactagaagaaaacataggggagattcttcagggcattggtctgggaaaagattttatgaataagacatcaaaagcacaggcaacaaaagaaaaaa-taaacaaactggatcacattgagctaaaaagcttctgcacagcaaaggaaataataaagtaagtgaaaagacaatgtacagaaggggagaaaatataaactactcatctggcaggaaattaatatcaagaatatacaaggaattcaaacaaatcaacagcaaagaaacccaacaatctaattaaatataagcaaatgctctgaacagacatttctcaaaagaagacatacaaatcaccaacaaatatatgaaaaaatgttcaacaccactaatcagcaggaaaatgctaatcaaagccacaatgaggcatcatctcaccccagttaggatggctattatagaagagactaaaataacaaatgctggcaaaaatgtgaagaaaagggaCTTTCTTCtttttttttttttttttttttttttttttttttgagtctcactctccgtccagggtggagtgcagtggaggtgtaatcttgctccctctgcctctaggtttcaaatagttctcctgcctctgcctcctgagtagctggggaaaaagtaactcctatacactgttggtaggaatgtaaattagtgcagccactatggagaacagtattgaaacccctcaagcaatcccattactgggaatttatccaaaggaaagaaaagcattatattggagagacatctgcat-ccccatgcttattgcaacactattcataatagccgagatatggaatcaacctaggtttccaacaacagatgaatggatttt i macFas5.chr14 I 34 C 0 s macNem1.NW_012010789v1 264899 1028 - 11451906 acaaagatgccagatgccaagaacactcattggggaa-----agtctcttcaataaatagtgctgggaaaactggatatccatctgcagaagaatgaaattagacccctgcctctcaccctatacaaaaatcaactcaaagtgtctcaaatacccaaatataacacccaaaatggtagagctactagaagaaaacataggggagattcttcagggcattgttctgggaaaagattttatgaataagacatcaaaagcacaggcaacaaaagaaaaaagtaagcaaactggatcacattgagctaaaaagcttctgcacagcaaaggaaataataaagtaagtgaaaagacaatgtacagaaggggagaaaatataaactactcatctggcaggaaactaatatcaagaatatacaaggaattcaaacaaatcaacagcaaagaaacccaacaatctaattaaatataagcaaatgctctgaacagacatttctcaaaagaagacatacaaatcaccaacaaatatatgaaaaaatgttcaacaccactaatcagcaggaaaatgctaatcaaagccacaatgaggcatcatctcaccccagttaggatggctattatagaagagactaaaataacaaatgctggcaaaaatgtgaagaaaagggaCTTTCTTC-----ttttttttttttttttttttttttttttgagtctcactctccgtccagggtggagtgcagtggaggtgtaatcttgctccctctgcctctaggtttcaaatagttctcctgcctctgcctcctgagtagctggggaaaaagtaactcctatacactgttggtaggaatgtaaattagtgcagccactatggagaacagtattgaaacccctcaagcaatcccattactgggaatttatccaaaggaaagaaaagcattatattggagagacatctgcat-ccccatgcttattgcaacactattcataatagctgagatatggaatcaacctaggtttccaacaacagatgaatggatttt i macNem1.NW_012010789v1 I 34 I 29280 s colAng1.NW_012116622v1 206272 1017 + 3898586 acaaagatactagatgccaagaacactcattggggaaaggatagtctcttcaataaatagtgctgggaaaactggatatccatatgcagaagaatgaaattagacccctgcctctcaccctatacaaaaatcaactcgaagtgtctcaaatacccaaatataacacccaaaatggtaaagctgctagaagaaaacataggggagattcttcaggacattggtctgggaaaagattttatgaataagacatcaaaagcacaggcaacaaaagaaaaaa-taaacaaattggatcacattgagctaaaaagcttctgcacagcaaaggaaataataaagtaagtgaaaagacaacgtacagaaggggagaaaatataaactactcatctggcaggaaactaatatcaagaatatgcaaggaattcaaacaaatcagcagcaaagaaa-ctaataa-ctaattaaatataagcaaatgctctgaacagacatttctcaaaagaagacatacaaatcaccaacaaatatatgaaaaaatgttcaacaccactaatcagcaggaaaatgctaatcaaagccacaatgaggcatcgtctcaccccagttaggatggccattatagaagagataaaaataacaaatactggcaaagatgtgaagaaaagggaCtttcttc------------------tttttttgtttttttgagtctcactctccgtccagggtggagtgcagtggaggtgtaatctggctccctctgcctttaggtttcaaatagttcccctgcctctgcctcctgagtagctgggGTaaaagtaactcccatacactgttggtaggaatgtaaattagtgcagccactatggagagcagtattgaaacccctcaagcaatcccattactgggaattcatccaaaggaaagaaaaacattatattggagtgacatctgcat-ccccatgcttattgcaacactattcataatagccgagatatggaatcaacctaggtttccaacaacagatgaatggatttt i colAng1.NW_012116622v1 I 35 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=3576.000000 s hg38.chr14_KI270725v1_random 76568 3 + 172810 taa s panTro5.chrY 313157 3 + 26350515 taa i panTro5.chrY C 0 C 0 s panPan2.chr11 88582918 3 + 134183262 taa i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 28060 3 + 57002 taa i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 37530 3 + 112108 aaa i nomLeu3.chrUn_GL397743_2 C 0 C 0 s macFas5.chr14 85841868 2 + 130733371 -aa i macFas5.chr14 C 0 I 29440 s colAng1.NW_012116622v1 207289 2 + 3898586 -aa i colAng1.NW_012116622v1 C 0 I 1 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=145674.000000 s hg38.chr14_KI270725v1_random 76571 124 + 172810 aatatggtatatatacaccacggaatgctatttagccat-aaaaaagaataaataaaatcctgtcattctcagcaacttggatggaactggagaatattatgttaagcaaaataagccaggaata s panTro5.chrY 313160 124 + 26350515 aatatggtatatatacaccgagaaatgctatttacccat-aaaaaagaataaataaaatcctgtcattctcagcaacatggatggaactggaggatattatgttaagcaaaataagccaggaata i panTro5.chrY C 0 C 0 s panPan2.chr11 88582921 125 + 134183262 aatgtggtatatatacaccaaggaaggctatttagccataaaaaaagaataaataaaatcctgtcattctcagcaacatggatggaactggaggatattatgttaagcaaaataagccaggaata i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 28063 123 + 57002 aat-tggtatatatacaccaaggaatactatttagccat-aaaaaagaataaataaaatcctgtcattctcagcaacatggatggaactggaggatattatgttaagcaaaataagccaggaata i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 37533 124 + 112108 aatgtggtatatatatatgaaggaaggctatttagccat-aaaaaagaataaataaaatcttgtcattctcagcaacctggatggaactggaggattttatgtcaagcaaaataagccaggaata i nomLeu3.chrUn_GL397743_2 C 0 C 0 s colAng1.NW_012116622v1 207292 122 + 3898586 catgtggtatatatacaccaaggaataatacttagccat-aaata--aataaataaaatcctgtcattctcagcaacatagattgaactgaaggatattatgttaagcaaaataagccagaaata i colAng1.NW_012116622v1 I 1 I 1159 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=342552.000000 s hg38.chr14_KI270725v1_random 76695 397 + 172810 gaaatttcaacaccacatgttctcactcacgcagaagctaaaaaaaagctgatctcatagaagtaaaaagtagaacagaggataatgcaggctgaaaagggtagggagaaaggaggaatagtaagatatttgttaatggatacaaaattacagctaggtaggagtaataagttctagtgttctatagtactgtagatgactatagttaacaatactatattatgtagtttaaaatacctaggagtagtttgaatgttcccaacacaaagaaataataaatgtttgagatgatagatatgctaattaccctgatctgatcaccatctacatgtactgaaacatccccatatagccatgaatatgtataatctttgtcaatttaaaaaTTAAAAAAAAA------ s panTro5.chrY 313284 403 + 26350515 gaaatttcaacaccacatgttctcactcacgcagaagcttaaaaaaagttgatctcatagaagtaaaaagtagaacagacgatactgcaggctgaaaagggtagggagaaaggaggaatagtaagagatttgttaatggatacaaaattacagctaggtaggagtaataagttctagtgttctatagtactgtagatgactacagttaacaatactatgttatgtagtttaaaatacctaggagtagtttgaatgttcccaacacaaagaaataataaatgtttgagatgatagatatgctaattaccctgatctgatcaccatctacgtgtactgaaatatccccgtatagctatgaatatgtataatctttgtcaatttaaaaaGTAAAAAAAAAAAAATT i panTro5.chrY C 0 C 0 s panPan2.chr11 88583046 401 + 134183262 gaaatttcaacaccacatgttctcactcatgcagaagctaaaaaaaagttgatctcatagaagtaaaaagtagaacagagaatactgcaggctgaaaagtgtagggagaaaggagggatagtaagagatttgttaacggatacaaaattacagttaggtaagagtaataagttctagtgttctatagtactgtagatgactatagttaacaatactatattatgtagtttaaaataccaaggagtagtttgaatgttcccaacacaaagaaataataaatgtttgagatgatagatatgctaattaccctgatctgatcaccatctacatgtattgaaacatccccatatagcaatgaatatgtataatctttgtcaatttaaaaaGTAAAAAAAAA--AGTT i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 28186 401 + 57002 gaaatttcaacaccacatgttctcactcacgcagaagctaaaaaaaagttgatctcatagaagtaaaaagtagaacagaggatactgcaggctgaaaagggtagggagaaaggaggaatagtaagagatttgttaatggatacaaaattacagctaggtaggagtaataagttctagtgttctatagtactgtagatgactatagttaacaatactatattatgtagtttaaaatacctaggagtagtttgaatgttcccaacacaaagaaataataaatgtttgagatgatagatatgctaattaccctgatctgatcaccatctacatgtactgaaacatccccgtatagccatgaatatgtataatctttgtcaatttaaaaaGTAAAAAAAAA--AATT i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 37657 393 + 112108 gaaagttcaacaccacatgttctcactcatgcagaagctaaaaaaaggttgatctcatagaagtaaaaagtagaagagcgaatactgcaggctgaaaagggtagggagaaaggagggatagtaagagatttgttaatgggtacaaaatgacagttaggtaggagtaataagttctagtgttctatagtactgtagatgactatagttaacaatactatattatgtagtttaaaataccaaggagtagtt----tgttcccaatacaaagaaataataaatgattgagatgatagatatgctaattaccctgatctgatcaccatctacatgtattgaaacatccccatatagccatgaatatgtataaactttgtcaatttataaagtaaaaaaaaa------ i nomLeu3.chrUn_GL397743_2 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e colAng1.NW_012116622v1 207414 1159 + 3898586 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=925622.000000 s hg38.chr14_KI270725v1_random 77092 752 + 172810 AATCTTGGAGAATGCATTTGAAGGACTTGTACTCAAGAAATCAAC-----TTAAGAACCTCAGTCTCCTTGGAATTTGTGTTTTCTAGACCAGTATTTCTCCAAATTAAAGCAAATTTAggctaggcatggtggcccatgtctataatcttagcactttggaaggccgaggcgggcagatcacttgaggtcaggagttcgagaccagctgacccaacattgtgaaacactgtctctactaaaaatacaaaaattagctgggcatgatggcatgtgcctgtaatcccagctactttggaggccgaggcaagataatcgcttgaactggagaggtggaagttgcagtgagctgagattgcaccactgcgctccagcctgggcaacagagcaagactctgtctc-aaaaaaaaaaaaaaaaaaaaaGCAAATTTAGTTCACTTTGGTATTTTGTCAAAATGTT-GATTCTTTTAAAGTAAATCTAAAGAATTTAGATGTAGTTGAAGCTTGTCATCTGTTCTTAATTTTTTTAATAaaaatataatatttcgattcagagtaaatctaaagtgagacctgaagctgctcccaggtgatactgatgctgcttatttttgcccagattttgagtcacaaggTTCTAAATTATTGGTTTGAAGTCCTACATGAGTAATCACTTGGGGAGCTCAATTAACACC------CAGACTAATTATTAATAAACCAGAATCTTCAGTATTAGGCTTCAATCATTAGCAA-tttttttt s panTro5.chrY 313687 752 + 26350515 AATCTTGGAGAATGCATTTGAAGGACTTGTACTCAAGAAATCAAC-----TTAAGAACCTGAGTCTCCTTGGGATTTGTGTTTTCTAGACCAGTACTTCTCCAAATTAAAGCAAATTTAggctgggcatggtggcccatgtctataatctcagcactttggaaggccgaggcgggcagatcacttgaggacaggagttcgagaccagctgaaccaacattgtgaaaccctgtctctactaaaaatacaaaaattagccggggatgatggcatgtgcctgtaatcccagctactttggaggccgaggcaagataatcgcttgaactggagaggtggaagttgcagtgagcagagattgcaccactgtgctccagcctgggcaacagagcaagactctgtctc--------aaaaaaaaaaaaaaGTGAATTTAGTTCACTTCGGTATTGTGTCAAAATGTT-GATTCTTTTAAAGTAAATCTAAAGAATTTAGATGTAATTGAAGCTTGTCATCTGTTCTTATTTTTTTTAATAAAAATATAATAGTTAGACTCAGagtaaatctaaagtgagacctgaagctgctcccaggtgatactgatgctgcttatttttccccagattttgagtcacaaggTTCTAAATTATTGGTTTGAAGTCCTACATGAGTAATCACCTGGGGAGCTCAATTAACACCCAGCAACAGACTAATTATTAATAAACCAGAATCTTCAGTATTAGGCTTCAATCATTGGCAAttttttttt i panTro5.chrY C 0 C 0 s panPan2.chr11 88583447 761 + 134183262 AATCTTGAAGAATGCATTTGAAGAACTTGTACTCAAGAAATCAACTTATTTTAAGAACTTGAGTCTCCTTGGAATTTGTGTTTTCTAGACCAGTACTTCTCCAAATTAAAGCAAATTTAggctgggcatggtggctcatgcctataatctcagcactttggaaggccgaggccagcagatcacttgaggtcaggagttcgagaccagctgacccaacattgtgaaaccctgtctctactaaaaatacaaaaattagccgggcatgatggcatgcgcctgtaatcccagctactttgtaggccgaggcaggataatcgcttaaactgaagagatggaagttgcagtgagccaagattgaaccactgcactccagcctgggcaacagagcaagactctgtctc---aaaaaaaaaaaagaaaaaaGCGAATTTAGTTCACTTTGGTATTGTGTCAAAATGTTAGATTCTTTTAAAGTAAATCCAGAGAATTTAGATGTAGTTGAAGCTTGTAATCTGTTCTTAATTTTTTTAAt-aaaataaaatatttagatttagagtaaatctaaagtgaggcctgaagctgctcccaggtgatactgatgctgctcatttttgcccaaattttgagtcacaagATTCTAAATTAGTGGTTTGAAGTCCTACATGCGTaatcacttggggagctcaattaacacccagcaacagactaattactaataaatcagaatcttcagtattaggcttcaatcattggcaa-tttttttt i panPan2.chr11 C 0 I 29744 s gorGor5.CYUI01002012v1 28587 749 + 57002 AATCTTGGAGAATGCATTTGAAGAACTTGTACTCAAGAAATCAAC-----TTAAGAACCTGAGTCTCCTTGGAATTTGTGTTTTCTAGACCAGTACTTCTCCAAATTAAAGCAAATTTAggctgggcatggtggcccatgtctataatctcagcactttggaaggccgaggcgggcagatcacttgaggtcaggagttcgagaccagctgacccaacattgtgaaaccctgtctctactaaaaatacaaaaattagccgggcatgatggcatgtgcctgtaatcccagctactttggaggccgaggcaagataatcgcttgaactggagaggtggaagttgcagtgagccgagattgcaccactgcgctccagcctgggcaacagagcaagactctgtctc-------aaaaaaaaaaaaaaaGCGAATTTAGTTCACTTTGGTATTGTGTCAAAATGTT-GATTCTTTTAAAGTAAATCTAAAGAATTTAGATGTAGTTGAAGCTTGTCATCTGTTCTTAATTTTTTTAATAaaaatat-atatttagattcagagtaaatctaaagtgagacctgaagctgctcccaggtgatactgatgctgcttatttttgcccagattttg-gtcacaaggTTCTAAATTATT-GTTTGAAGTCCTACATGAGTAATCACTTGGGGAGCTCAATTAACACCCAGCAACAGACTAATTATTAATAAACCAGAATCTTCAGTATTAGGCTTCAATCATTGGCAA-tttttttt i gorGor5.CYUI01002012v1 C 0 I 2 s nomLeu3.chrUn_GL397743_2 38050 760 + 112108 aATCTTGAAGAATGCATTTGAAGAACTTGTACTCAAGAAATCAACTTATTTTAAGAATTTGAGTCTCCTGGGAATTTGTGTTTTCTAGACCAGTACTTCTCCAAATTAAAGCAAATTTAggttgggcatggtggctcatgcctataatctcagcactttggaaggccgaggctggcagatcacttgaggtcaggagttcgagaccagctgacccaacattgtgaaaccctgtctctactaaaaatacaaaaattagctgggcatgatagcatgcacctgtaatcccagacactttgtaggctgaggcaggataattgcttaaactggagaggtggaagttgcagtgagtcaagattgcaccactacactccagcctgggcaacagagcaagactctgtctc----aaaaaaaaaaaaaaaaaaGCTAATTTAGTTCACTTTGGTATTGTGTCAAAATGTA-GATTCTTTTAAAGTAAATCCAAAGAATTTAGATGTAGTTGAAGCTTGTAATCTGTTCTTAATTGTTTCAATAAAAAtaaaatatttagatttagagtaaatctaaagtgagacctgaagctgctccgaggtgatactgatgctgctcatttttgcccaaattttgaatcacgaggTTCTAAATTAGTGGTTTGAAGTCCTACATGTGTaatcacttggggagctcaattaacacccagcaacagactaattattaataaatcagaaacttcagtattaggcttcaatcattggcat-tttttttt i nomLeu3.chrUn_GL397743_2 C 0 I 6 s colAng1.NW_012116622v1 208573 754 + 3898586 AATCTTAAAGAATGCATTTGAAGAACTTGTACTCAAGAAACCAACTTAT-TTTAGAACTTGAGTCTCCTTGGAATTTGTGTTTTCTAGAGCAATACTTCTCCAAATTAAAGCAAATTTAggctgggcatggtggttcatgcctgtaatctcagcactttgggaggccgaggcgggcggatcacttgaggtcaggaattcaagaccagctgacccaacatggtgaaaccctg--tctactaaaaatacaaaaatcagctggacgtgacggcatgcacctataatcccagctactttggaggccgaggcaggataattgcttgaaccggagaggtggaagttgcagtgagccaagattgcaccactgtactccagcctgggcaacacagcaaga--ctgtctcaaaaaaaaaaaaaacaaaaaaaGTGAATTTAGGTCACTTTGGTATTGTGTCAAAATGTA-GACTCTTTTAAAGTAAATCTAAAGAATTTAGATGTAGTTGAAGCTTGCAATCTGTTCTTAATTTTTTTAATAAAAATAAAATAttcagatttagagtaaatctaaactgaggcctgaagctgctcccaggtgatactgacgctactCATTTTTGCCCCGATTTTGAGTCACAAGGTTCTAAATTAGTAGTTTGAAGTCCTACATGCGTaatcatttggggagctcaattaacacccagcaacagactaattattaataaatcagaatcttcaggattaggcttcaatcttt------tttttttt i colAng1.NW_012116622v1 I 1159 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=17255.000000 s hg38.chr14_KI270725v1_random 77844 24 + 172810 gacacacagtctcccactgtcgcc s panTro5.chrY 314439 24 + 26350515 gacacacagcctcccactgtcgcc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 29338 24 + 57002 gacacacagtctcccactgtcgcc i gorGor5.CYUI01002012v1 I 2 C 0 s nomLeu3.chrUn_GL397743_2 38816 24 + 112108 gaggtggagtctcccactgccacc i nomLeu3.chrUn_GL397743_2 I 6 C 0 s colAng1.NW_012116622v1 209327 24 + 3898586 gagacggagtctcccactgtcgcc i colAng1.NW_012116622v1 C 0 I 31550 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I e panPan2.chr11 88584208 29744 + 134183262 I a score=4092.000000 s hg38.chr14_KI270725v1_random 77868 7 + 172810 caggctg s panTro5.chrY 314463 7 + 26350515 caggctg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 29362 7 + 57002 caggctg i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 38840 7 + 112108 caggctg i nomLeu3.chrUn_GL397743_2 C 0 I 33531 e ponAbe2.chrUn 2077554 13412 + 72422247 I e colAng1.NW_012116622v1 209351 31550 + 3898586 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I e panPan2.chr11 88584208 29744 + 134183262 I a score=1451343.000000 s hg38.chr14_KI270725v1_random 77875 1132 + 172810 aagtcctgaggcCAGAATG-AGACTAGGACATGGTTCCTTTgtctaagtaaagtgaggcagacaatggaatacttcagacttcaaattagtatggtaagtgctatgaagagtatgattagagttcattacttacccagaaaagggtcactcagcccagcctgggagttagagaaggtttcctgaagtcttgacatgtgagtcatgaaaggacataaggagttaaacacgtgacaaaataagctaagagaattctcaacaaaagacaaaatattgccaaaggcttttaggcatatactatcttagtattattggtagaatgtaatgactttctgtatttcaaaagtgtaaaatacaaagtgggccatggtatgagataaaccagtaaatatgttctgggaacatatcatagaagggcgtgtatgctgtcctaaggagcttaaacttcaacttcagttcatgggagccaatgacaagatctgagcaggggaaggatgtggctagaggggcattttagacagacaagatcctctgtggattacacctaggctaagcaacgggttaaagttgttgtcttaagacaatagtccaggtaaaagataataaagttttaaattaggatgttagtaggaatgaggaagacggatggatttcagaaatagtaaggaaatgtattagcaggacttgattagtgattgacttggggaaggaggggaagatagagttcaggatgactccgagactgtctggtgtcggtggctaatgactgaagctattaatagaggtaggtaatgcagaccaaaagcaggcccggggtgagagatgataaatttgaattttaacatgttgagtttggacatccaggatgaaataaccacaaaacatttaaatatacgaatctgaaaaggtaagcatcataagcatatgagctattggtaaaattctgatacttaatgaagtctcgcagggaggcagtacagaggcaagcaatgggctggggataaaacatagggaaatattatttaaataaagatgaaagaaaaggagcccacaaacgaagctgaaaaggcatagtcaaaaaaagaggaTTGCCAAAGTGCCACCTTTGAAGCTCTGCTGTTACACTTTATAAGGA s panTro5.chrY 314470 1126 + 26350515 aagtcctgaggcCAGAATG-AGACTAGGACATGGTTCCTTTGCCTAagtaaagtgaggcagacaatggaatacttcagacttcaaataagtatggtaagtgctatgaagagtatgattagagttcattatttacccagaaaagtgtcactcagcccagcctggaagttagagaaggtttcctgaagtcttgacatgtgagtcatgaaaggacataaggagttaaccacgtgacaaaataagctaagagaattctcaacaaaagacaaaatattggcaaaggcttttaggcatatactagcttagtattattgggagaaTGTAATGATTTTCTCTATTTCAAAAGTGTAAAATACAAAGTGGGCCATGATATGAGATAAACCAGTAAATATGTTCTGGGAACAGATCATAGAAGGGAGTGTACGCTGTCCTAAGGAGCTTAAACTTCAGCTTCAGTTCATGGGAGCCAATGACAAGATCTGAGCAGGGGAAGGATGTGGCTAGAGGGGCATTTTAGACAGACAAGATCCTCTGTGGATTACACCTAG-----GCAACGGGTTAAAGTTGTTGTCTTAAGAcaatagtccaggtaaaagataataaagttttaaattaggatgttagtaggaatgaggaagagggatggatttcagaaatagtaaggaaatgtattagcaggacttgattagtgattgacttggggaaggaggggaagatagagttcaggatgactccgagactgtctggtgtcagtggctaatgactgaagctattaatagaggtaggaaatgcagaccaaaagcaggcccggggtgagagatgataaatttgaattttaacatgttgagtttgcacatccaggatgaaataaccacaaaacatttaaatataagaatctgaaaaggtaagcatagtaagcatattagctattggtaaaattctgatacttaatgaaatctcgcagggaggcagtacagatgcaagcaatgggc-ggggataaaacatagggaaatattatttaaataaagatgaaagaaaaggagcccacaaaggaagctgaaaaggcatagtcaAAAAAAGAGGCTTGCCAAAGTGCCACCTTTGAAGCTCTGCTGTTTCACTTTATAAGGA i panTro5.chrY C 0 C 0 s panPan2.chr11 88613952 1130 + 134183262 aagtcctgaggccagaata-agactaggacatggttcctttgcctaagtaagttgaggcagacaatggaatacttcagacctcaaattagtatggtaagtgctatgaagattatgattagaattcattatttacccagaaaagggtcactcagcccagccggggagttagacaatgtttcctgaagtcttgacacgtgagtcatgaaaggacat-aggagttaaccatg-gacaaaataagctaagaaaattctcaacaaaagataaaatattggcaaaggcttggaggcatatactagcctagttttattgggagaatgtaatgattttctgtatttcaaaagtgtaaaatacgaagtaggccacgatatgagataaaccagtaaatatgttctgggaacagatcatagaagggcgtgtatgctgtcctagggagcttaaacttcaacttcagttcacgggagccaatgacaagtcctgagcaggggaaggatgtggctagaggggcattttagatagacaacgtcctctatggatcacacctaggctaagcaacgggttaaagttgttgtcttaagacaatagtccaggtaaaagataataaaattttaaattaggatgttagtaggaatgaggatgagggatggatttcagaaatagtaaggaaatgtattagcaggacttgattagtgattgacttggggaaggaggggaagatagagttcaggatgactccgagactgtctggtgtgggtggctaatgactgaagctattaatagaggtaggaaatgcagatcaaaagcaggcccagggtgagagatgataaatttgaattttaacatgttgagtttggacatccaggatgaaataaccaccaaacatttaaatatatgaatctgaaaaggtaagcatcataagcatattagctattggtaaaattctgatacttaatgaagtgtcgcagggagggagtacagaggcaagcaatgggctggggataaaacatggggaaatattatttaaataaagatgaaagaaaaggagcccacaaaggaagctgaaaaggcatagtcaaaaaaagaggatcaccaaagtgccacctttgaagcTCTGCTGTTACACTTTATAAGGA i panPan2.chr11 I 29744 C 0 s gorGor5.CYUI01002012v1 29369 1132 + 57002 aagtccagaggcCAGAATG-AGACTAGGACATGGTTCCTTTGCCTAagtaaagtgaggcagacaatggaatacttcagacttcaaattagtatggtaagtgctatgaagagtatgattagagttcattatttacccagaaaagggtcactcagcccagcctgggagttagaggaggtttcctgaagtcttgacatgtgagtcatgaaaggacataaggagttaaccacgtgacaaaataagctaagagaattctcaacaaaagacaaaatattggcaaaggcttttaggcatatactagcttagtattattgggagaatgtaatgattttctgtatttcaaaagtgtaaaatacaaagtgggccatgatatgagataaaccagtaaatatgttctgggaacagatcatagaagggcgtgtatgctgtcctaaggagcttaaagttcaacttcagttcatgggagccaatgacaagatctgagcaggggaaggatgtggctagaggggcattttagacagacaagatcctctgtggattacacctaggctaagcaacgggttaaagttgttgtcttaagacaatagtccaggtaaaagataataaagttttaaattaggatgttagtaggaatgaggaagagggatggatttcagaaatagtaaggaaatgtattagcaggacttgattagtgattgacttggggaaggaggggaagatagagttcaggatgactccgagactgtctggtgtcggtggctaatgactgaagctattaatagaggtaggaaatgcagaccaaaagcaggcccggggtgagagatgataaatttgaattttaacatgttgagtttggacatccaggatgaaataaccacaaaacatttaaatatacgaatctgaaaaggtaagcatcataagcatatgagctattggtaaaattctgatacttaatgaagtctcgcagggaggcagtacagaggcaagcaatgggctggggataaaacatagggaaatattatttaaataaagatgaaagaaaaggagcccacaaaggaagctgaaaaggcatagtcaAAAAAAGAGGCTTGCCAAAGTGCCACCTTTGAAGCTCTGCTGTTACACTTTATAAGGA i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 72378 1127 + 112108 aagtcctgaggccagaatg-agactaggacatggttcctttgcctaagtaagttgaggcagacaatggaatacttcagacttcaaattagtatggtaagtgctatgaagattatgattagagttcattatttacagagaaaagggtcactcagcccagcctgggagttagacaatgtttcctgaagtcttgacatgtgagtcatgaaaggacataaggagttaaccatgtgacaagataggctaagagaattctcaacaaaagacaaaatattggcaaaggcttggaggcatatactagcttattattattgggagaatgtaatggttttctgtatttcaaaagtgtaaaatacaaaatgggccatgatatgagataaaccggtaaatatgttctgggaacagatcatagaagggcgtatatgctgtcctaagaagcttaaacttcagcttcagttcatgggcgccaatgacaagtcctgagcagggtaaggatgtggctagaggggcattttagatagacaaggtcctctgtagattacacctaggctaagcaacgggttaaaattgttggcttaagacaatagtccaggtaaaagataataaagtt-----ttaggatgttagtaggaatgaggaagagggatggatttcagaaatagtaaggaaatgtattagtaggacttcactagtgattgacttggggaaggaggggaagatagagttcaggatgactctgagactgtctggtgtgagtggctaatgactgaagctattaatagaggtaggaaatgcagatcaaaagcagtcccagggtgagagatgataaatttgaattttaacatgttgagtttggacatccaggatgaaataaccaccaaacatttaaatatatgaatctgaaaaggtaagtatcatcagcatattagctattggtaaaattctgatacttaatgaagtctcgcagtgagggagtacagaggcaagcaatgggctggggataaaacatggggaaatattatttaaataaagatgaaagaaaaggagcccaccaaggaagctgaataggcatagtcaaaaaaagaggatcaccaaagtgccacctttgaagcTCTGCTGTTACACTTTATAAGGA i nomLeu3.chrUn_GL397743_2 I 33531 C 0 s colAng1.NW_012116622v1 240901 1128 + 3898586 aagtcctgaggccagaatgaagactaggacatggttcctttgcctaagtaaggtgaggcagacaatggaatacttcacacttcaaattagtatgataagtgctgtgaagagtatgattagagttcattatttatccagaaaagggtcacttagcccagcctgggaattagagaaggtttcctgaagtcttgacatgtgagtcatgaaaggacataaggagttaaccacgtgacaaaataagctaagagaattctcaagaaaagacaaaatattggcaaaggcttggaggcatatactagcttagtattattgggagaatgtaGTGATTTTCTGTATTTCACAAGTGTAAAATACaaagtgggctatgatata----aaaccagtaaatatgttctgggaacagatcacagaagggtgtatatgctgtcctaaggagcttaaatttcaacttcagttcatgggagccaatggcaagtcctgagcaggggaagaatgtggctggaggggcgttttagatagacaaggtcctctgtagattacacctaggctaagcagcaggttaaagttgttgtcttaagacaatagtccaggtaaaagataataaagttttaaattaggatgttagtaggaatgaggaagacaggtagatttcagaaatagtaaggaaatgtattagcaggaactgattagtgattgacttggggaaggatgggaagatagagttcaggatgactccgagactgtctggtgtggggggctaatgactaaagctattaacagaggtaggaaatgcagaccaaaagcaggcccggggtgagagacgataaattggagttttaacatgttgagtttggacatccaggatgaaataactaccaaacatttaaatatatgaatctgaaaaggtaagcatcataagcatattagctattggtaaaattttgatactcaataaagtctcgcagggagggagtacagaggcaagcaatgggctggggataaaacatggggaaatattatttaaataaagataaaagaaaaggagcccacaaaggaagctgaaaaggcatagtcaaaaaaagaggatcaccaaagtgcca-ctttgaagccTTGCTGTTACACTTTATAAGGA i colAng1.NW_012116622v1 I 31550 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=6250.000000 s hg38.chr14_KI270725v1_random 79007 7 + 172810 -AAGTTTT s panTro5.chrY 315596 7 + 26350515 -AACTTTT i panTro5.chrY C 0 C 0 s panPan2.chr11 88615082 7 + 134183262 -AACTTTT i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 30501 7 + 57002 -AACTTTT i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 73505 7 + 112108 -AACTTCT i nomLeu3.chrUn_GL397743_2 C 0 C 0 s colAng1.NW_012116622v1 242029 7 + 3898586 -AACTTTT i colAng1.NW_012116622v1 C 0 C 0 s tarSyr2.KE946445v1 707418 7 - 1202789 GAATTAT- i tarSyr2.KE946445v1 N 0 N 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=35885.000000 s hg38.chr14_KI270725v1_random 79014 29 + 172810 GGTTACCTGGGATTGCATGCATTTATAAA s panTro5.chrY 315603 29 + 26350515 GCTTATCTGGGATTGCATGCAATTATAAA i panTro5.chrY C 0 C 0 s panPan2.chr11 88615089 29 + 134183262 GGTTACCTGGGATTGCATGCATTTATAAA i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 30508 29 + 57002 GGTTACCTGGGATTGCATGCATTTATAAA i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 73512 29 + 112108 GGTTACCTGAGATTGCGTGCATTTATAAA i nomLeu3.chrUn_GL397743_2 C 0 C 0 s colAng1.NW_012116622v1 242036 29 + 3898586 GGTTACCAGGGATTGCATGCATTTATAAA i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e macNem1.NW_012010789v1 265927 29280 - 11451906 I e macFas5.chr14 85841870 29440 + 130733371 I e rheMac8.chr14 82553846 29577 + 127894412 I a score=1846164.000000 s hg38.chr14_KI270725v1_random 79043 638 + 172810 AGTTTCTATTATTAGGAAGACAATAATAATGATAAGGCCCTTTCTCATTGTTGTCAGTGTAATTTATCTATTTAATTATAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGG-GGCAAAATGAATTATATCTTAATAATAATCTGGAATTATTCTCTCTAACTTGACATATTTTTAATTCTTGCTAGATTTTCAAAACGTCATACCTCGAACCACCACCAGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATGCATTTGTAACCCAAGTCTTTAAATGGTTCTTTTGCTATATAAAACCTGTATAGAGGACTAAAACCACGGAAATTAGGTGAATCATTCATGCGGATTCATTGTTTGATATTCAGTACTATGAAAACCTCATCCCTCAA--ATTTAAAAAATTAT-----AAT-----AAAATAGAAAAGAACACCAGACAGAGAAAAAAGAAACAAAACAAACACATTAAAAACTGACCCTGCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCCTTTAATTCAGTGAGGCAGTAGGTGTTTt----tttg------tttgtttttgtttcgtttt--gttttttt s panTro5.chrY 315632 640 + 26350515 AGTTTCTATTATTAAGAAGACAATAATAATGATAAGGCTCTTTCTCATTTTTGTCAGTGTAATTTATCTATTTAATTGTAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATACACTTGG-GGCAAAATGAATTATATCTTAATAATAATCTGGAATTTTTCTCTCTAATTTGGCATA-TTTTAATTCTTGCTAGATTTTCAAAACGTCATACCTCGAAACACCACCAGATGGCTATGAGAATGTTACAAACATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACATTTGTAACCCAAGTCTTTAAATGGTTCTTTTGCTATATAAAACCTGTATAGAGGACTAAAACCAAGAAAACTAGGTGAATCATTCATGCGGATTCATTGTTTGATATTCAGTACTATGAAAACCTCATCCCTCAA--AGTT-aaaaattat-----aat-----aaaatagaaaagaacacgagagagagaaaaaagaaacaaaa-aaatacactaaaaaCTGACCCTGCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCCTTTAATTCAGTGAGGCAGTAGGTATTTTTTTGtttg------tttgtttttgtttcatttt-ggttttttt i panTro5.chrY C 0 C 0 s panPan2.chr11 88615118 626 + 134183262 AGTTTCTATTGTTAGGAAGACAATAATAATGATAAGGCTCTTTCTCATTGTTGTCAGTGTAATTTATCT-----ATTACAGAACCTTGTTCCAGGATGCTTAATCTGAAGTATATACTTGGAGGCAAAATGAATTATATCTTAATAAAAATC----------CTCTCTAACTTGACATA-TTTTAATTCTTGCTAGATTTTCAAAACATCATACCTCGAACCACCACCAGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACTTTTGTAATCCAAGTCTTTAAATGGTTCTTTTGCTATGTAAAACCTGTATGGAGGACTAAAACCAAGGAAATTAGGTGAATCATTCATGCGGGTTCCTTGTTTGATATTCAGTACTATGAAAACCTCATCCCTCaa--attaaaaaaattacaataaaat-----aaaatagaaaagaacac----cagagaaaaaagaaacaaaacaaatacattaaaaACTGACCCTGCTGAAGCAGTTGCCACTCTCTGAAATAAC----AAACTGCTGAACATGCCT----TTCAGTGAGGCAGTAGGTGTTTTTTTGTTTGTTTGtttttgtttttgtttcgtttt--gttttttt i panPan2.chr11 C 0 C 0 s gorGor5.CYUI01002012v1 30537 640 + 57002 AGTTTCTATTATTAGGAAGACAATAATAATGATAAGGCTCTTTCTCATTGTTGTCAGTGTAATTTATCTATTTAATTATAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGG-GGCAAAATGAATTATATCTTAATAATAATCTGGAATTTTTCTCTCTAACTTGACATA-TTTTAATTCTTGCTAGATTTTCAAAATGTCTTACCTCGAACCACCACCAGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACATTTGTAACCCAAGTCTTTAAATGGTTCTTTTGCTATATAAAACCTGTATAGAGGACTAAAACCAAGGAAATTAGGTGAATCATTCATGCGGATTCATTGTTTGATATTCAGTACTATGAAAACCTTAT-CCTCAA--ATTTAAAAAATTAT-----AAT-----AAAATAGaaaagaacaccagacagagaaaaaagaaacaaaacaaatacattaaaaacTGACCCTGCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCCTTTAATTCAGTGAGGAAGTAGGtgtttttt--tttg------tttgtttttgtttcttttttttttttttt i gorGor5.CYUI01002012v1 C 0 C 0 s nomLeu3.chrUn_GL397743_2 73541 645 + 112108 AGTTTCTATTATTAGGAAGACAGTAATAATGATAAGGCTCTTTCTCATTGTTGTCAGTGTAATTTGTCTATTTAATTATATAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGAAGGCAAAATGAATTATATCTTAATAATAATCTGGAATTTTTCTCTCTAACTTGACATA-TTTTAATTCTTGCTAGATTTTCGAAACATCATACCTCGAACCACCACAAGATGGCTATGAGAATGTTACAAATATTGTGCCACCATATAATGCTTTCTCAGCCCGAGGCATGCCAGAGGTAAAATAAAATACATTTGTAATCCAAGTCTTTAAATGGTTCTTTTGTTATGTAAAACCTGTATAGAGGACTAAAACCAAGGAAATTAGGTGAATCATTCATGCGGGTTCATTGTTTGATATTCAGTACTATGAAAACCTCATCCCTCaa--attaaaaaatatataataaaat-----aaaatagaagagaacaccagacagagaaaaaagaaacaaaacaaatacattaaaaACTGACCCTGCTGAAAGAGTTGCCACTCTCTGAAATGCC----AAACTGCTGAACATGCCT----TTCAGTGAGGCAGTAGGTGTTTTTTTGTTTGTTTGtttttatatttgttttgtttt--gtttcttt i nomLeu3.chrUn_GL397743_2 C 0 n 0 s rheMac8.chr14 82583423 633 + 127894412 AGTTTCTATTATTAGGAAGACAATAATAATGATAAGGCTCTTTCTCATTGTTGTCAGTGTAATTTTTCTATTTAATTATAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGGAGGCAAAATGAATTATATCTTAATAATAATCTGGAATTTTTCTCTCCAACTTGACATG-TTCTAATTGTTGCTAGATTTTCAAAACATCATACTTCGAACCAACACCAGATGGCTACGAGAATGTTACAAATATTGTTCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACATTTGTAATCCAAGTCTTTAAATGATTCTTTTGCTATATAAAATCTGTATAGAGGACTAAAACCAAGGAAATTAGGTGAATCATACATGCTGATCCATTGTTTGATATTCAGTACTATGAAAACCTCATCCCCCaa--ttaaaaaaaattat-----aat-----aaaatagaaaagaacac----cagagaaaaaagaaacaaaacaaatacattaaaaACTGATCCTGCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCTTTTAATTCAGTGAGGCAGTAGGTGGTT-----TTTG------tttgtttttgttttgtttt--gttttttt i rheMac8.chr14 I 29577 C 0 s macFas5.chr14 85871310 633 + 130733371 AGTTTCTATTATTAGGAAGACAATAATAATGATAAGACTCTTTCTCATTGTTGTCAGTGTAATTTATCTATTTAATTATAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGGAGGCAAAATGAATTATATCTTAATAATAATCTGGAATTTTTCTCTCCAACTTGACATG-TTCTAATTGTTGCTAGATTTTCAAAACATCATACTTCGAACCAACACCAGATGGCTACGAGAATGTTACAAATATTGTTCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACATTTGTAATCCAAGTCTTTAAATGATTCTTTTGCTATATAAAATCTGTATAGAGGACTAAAACCAAGGAAATTAGGTGAATCATACATGCTGATCCATTGTTTGATATTCAGTACTATGAAAACCTCATCCCCCaa--ttaaaaaaaattat-----aat-----aaaatagaaaagaacac----cagagaaaaaagaaacaaaacaaatacattaaaaACTGATCCTGCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCTTTTAATTCAGTGAGGCAGTAGGTGGTT-----TTTG------tttgtttttgttttgtttt--gttttttt i macFas5.chr14 I 29440 C 0 s macNem1.NW_012010789v1 295207 633 - 11451906 AGTTTCTATTATTAGGAAGACAATAATAATGATAAGGCTCTTTCTCATTGTTGTCAGTGTAATTTATCTATTTAATTATAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGGAGGCAAAATGAATTATATCTTAATAATAATCTGGAATTTTTCTCTCCAACTTGACATG-TTCTAATTGTTGCTAGATTTTCAAAACATCACACTTCGAACCAACACCAGATGGCTACGAGAATGTTACAAATATTGTTCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACATTTGTAATCCAAGTCCTTAAATGATTCTTTTGCTATATAAAATCTGTATAGAGGACTAAAACCAAGGAAATTAGGTGAATCATACATGCTGATCCATTGTTTGATATTCAGTACTATGAAAACCTCATCCCCCaa--ttaaaaaaaattat-----aat-----aaaatagaaaagaacac----cagagaaaaaagaaacaaaacaaatacattaaaaACTGATCCTGCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCTTTTAATTCAGTGAGGCAGTAGGTGGTT-----TTTG------tttgtttttgttttgtttt--gttttttt i macNem1.NW_012010789v1 I 29280 C 0 s colAng1.NW_012116622v1 242065 646 + 3898586 AGTTTCTATTATTAGGAAGACAATAATAATGATAAGGCTCTTTCTCATTGTTGTCAGTGTAATTTATCTATTTAATTATAGAACCTAGTTCCAGGATGCTTAATCTGAAGTATATACTTGGAGGCAAAACGAATTATATCTTACTAATAAACTGGAATTTTTCTCTCCAACTTGACATG-TTCTAATTCTTGCTAGATTTTCAAAACATCATACTTCGAACCAACACCAGATGGCTACGAGAATGTTACAAATATTGTTCCACCATATAATGCTTTCTCAGCCCAAGGCATGCCAGAGGTAAAATAAAATACATTTGTAATCCAAGTCTTTAAATGGTTCTTTTGCTATATAAAACCTGTGTAGAGGACTAAAACCAAGGAAATTAGGTGAATCATACATGCTAATCCATTGTTTGATATTCAGTACTATGAAACCCTCATCCCCCAAATTAGaaaaaaattat-----aataaaacaaaatagaaaagaacat----cagaaaaaaaagaaacaaaacaaatacattaaaaacTGATCCTTCTGAAGCAGATGCCACTCTTTGAAATAACAAAGAAACTGCTGAACACGCCTTTAATTCAGTGAGGCAGTAGGTGTTT-----TTTGTTTGtttttgtttttgttttatttt--gtgttttt i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I a score=603733.000000 s hg38.chr14_KI270725v1_random 79681 275 + 172810 gagat-ggagtttcgctcttgtcacccaggctggagtgtagtggcaaaatctgggctcactgcaacctccgcctcccaggtccaagcaattctcttgcctcagcctcctgagtagctgggatcacaggtgcacaccaccacaccctgctaattttgtatttt---ttttagt--ggaggc-gaggtttc-tctatgttggtcaggctagtctcaaactcccaaactcaggtgatcgg--ctcacctcggcctcccaaagtgctgggattacaggcgtgagccacc s panTro5.chrY 316272 275 + 26350515 gagac-ggagtttctctcttgtcacccaggctggagtgtagtggcacaatctgggctcactgcaaactccgcctcccaggtccaagcaattctcttgccttagcctccttagtagctgggatcacaggtgcacaccaccacaccctgctaattttgtatttt---ttttagt--ggaggc-ggggtttc-tctatgttggtcaggctagtctcgaattcccaacctcaggtgatctg--ctcacctcggcctcccaaagtgctgggattacaggcgtgagccacc i panTro5.chrY C 0 C 0 s panPan2.chr11 88615744 278 + 134183262 gagac-agagtttcactcttgtcacccaggctggagtgcagtggcacaatctcggctcactttaacctccgcctccgaggttcaagcaattctcttgcctcagcctcccccgtagctgggaccacaggtgcatgccgccacatcctgctaattttgtatttt---ttttagttggtagac-ggggtttcgtctgtgttggtcaggctagtcttgaactcctgacctcaggtgatctg--cttgcctcggcctcccaaagtgctgggattacaggcgtgagctacc i panPan2.chr11 C 0 N 0 s gorGor5.CYUI01002012v1 31177 276 + 57002 gagactggagtttcactcttgtcacccaggctggagtgtagtggcacaatctgggctcactgcaacctccacctcccaggtccaagcaattctcttgcctcagcctcctgagtagctgggatcacaggtgcacaccaccacaccctgctaattttgtatttt---ttttagt--ggaggc-ggggtttc-tctatgttggtcaggctagtctcgaactcccaacctcaggtggtctg--ctcacctcggcctcccaaagtgctgggattacaggcgtgagccacc i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr14 82584056 279 + 127894412 gagac-ggagtttcgatgttgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcccgggttcaagcaattatctttgctcagcctcctgagtagctgtgaccacaggtgcacgccgctatgcccggctaattttgtactttttgttttagt--ggagac-agggttt--tctatgttgttcaggctagtctcgaactcccaacctcaggtgatccagcctctgctcggcctcccaaagtgctgggattacagatgtgagccacc i rheMac8.chr14 C 0 N 0 s macFas5.chr14 85871943 278 + 130733371 gagac-agagtttcgatgttgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcccgggttcaagcaattatcttgcctcagcctcctgagtagctgtgaccacagctgcacgccgctatgcccggctaattttgtactttttgttttagt--ggagac-agggtttc-tctatgttgttcaggctagtctcgaactcccaacctcaggtgatccg--ctctcctcggcctcccaaagtgctgggattacaggtgtgagccacc i macFas5.chr14 C 0 C 0 s macNem1.NW_012010789v1 295840 278 - 11451906 gagac-ggagtttcgatgttgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaacctctgcctcccgggttcaagcaattatcttgcctcagcctcctgagtagctgtgaccacaggtgcacgccgctatgcccggctaattttgtactttttgttttagt--ggagac-agggtttc-tctatgttgttcaggctagtctcgaactcccaacctcaggtgatccg--ctcacctcggcctcccaaagtgctgggattacaggtgtgagccacc i macNem1.NW_012010789v1 C 0 N 0 s colAng1.NW_012116622v1 242711 279 + 3898586 gagat-ggagtttcactgttgtcacccaggctggagtgcactggcgcaatctcggctcactgcaacttccacctcccgggttcaagcaattatcttgactcagtctcctgagtagctgggaccacaggcacacgccgctatgcccggctaattttgtattttttgttttagt--ggagacgggggtttc-tctatgttgttcaggctagtctcgaactcccaacctcaggtgatcta--cttgcctcggcctcccaaagtgctggaattacaggtgtgagccacc i colAng1.NW_012116622v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=2422.000000 s hg38.chr14_KI270725v1_random 79956 3 + 172810 acg s panTro5.chrY 316547 3 + 26350515 acg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 31453 3 + 57002 acg i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr14 85872221 3 + 130733371 gcg i macFas5.chr14 C 0 N 0 s colAng1.NW_012116622v1 242990 3 + 3898586 acg i colAng1.NW_012116622v1 C 0 N 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=664.000000 s hg38.chr14_KI270725v1_random 79959 4 + 172810 TTAT s panTro5.chrY 316550 4 + 26350515 TTAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 31456 4 + 57002 TTAA i gorGor5.CYUI01002012v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=10444.000000 s hg38.chr14_KI270725v1_random 79963 4 + 172810 AAAG s panTro5.chrY 316554 4 + 26350515 AAAG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 31460 4 + 57002 AAAG i gorGor5.CYUI01002012v1 C 0 C 0 s macNem1.NW_012014799v1 656590 4 + 11597128 aaag i macNem1.NW_012014799v1 N 0 C 0 s cerAty1.NW_012001187v1 164511 4 + 5626091 aaag i cerAty1.NW_012001187v1 N 0 C 0 s chlSab2.chr14 90911348 4 - 107702431 aaag i chlSab2.chr14 N 0 C 0 s manLeu1.NW_012101586v1 211833 4 + 521157 aaag i manLeu1.NW_012101586v1 N 0 C 0 s colAng1.NW_012118465v1 142226 4 + 1278784 aaag i colAng1.NW_012118465v1 N 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=730268.000000 s hg38.chr14_KI270725v1_random 79967 270 + 172810 GGAAACTTCCTATTTGCCCTCTAAATGTTTGCAGAAAATGAATGGACAAAACATAAATTAATAGAAGAAAGAGGC-----AAAAAAAAATTCTGTAAAATGTAGGGGAAAAATCacagggt----ct--ctctgttacccagcatgaaatgcagtggtgtgatcatggctcattgcaaccttgaattctgaagcacaagtgattctcccccctaagcctatggtgtagctgggatcacaggggcatgccaccatgcACACATACATGGTTATTTGCTGGAG s panTro5.chrY 316558 272 + 26350515 GGAAACTTCCTATTTGCCCTCTAAAGCTTTGCAGAAAGTGAATGGACAAAACATAAATTAATAGAAGAAAGAGGC-----AAAAAAAATTTCCGTAAAATGTAGGGGAAAAATCacagggt----ctcactcagttacccagcatgaagtgcagtggtatgatcatgactcattgcaaccttgaattctcaagcacaagtgattatcccctctaagcctatagagtagctgggatcacaggggcatgccaccatgcccACATACATGGGTATTTGCTGGAG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 31464 269 + 57002 GGAAACTTCCTATTTG-CCTCTAAAGGTTTCCAGAAAATGAATGGACAAAACATAAATTAATAGAAGAAAGAGGC-----AAAAAAAAATTCTGTAAAATGTA-GGGAAAAATCacagggt----ctcactcagttacccagcatgaagtgcagtggtgtgatcatggctccttgcaaccttgaattctcaagcacaagtgattctcccc-ctaagcctatggagtagctgggatcacaggggcatgccaccatgcccACATACATGGGTATTTGCTGGAG i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 33360 275 - 108979918 ggaaacttcctatttgccctctaaaggtttgcagaaaatgaatagacaaaacacaaactaatagaagaaagaggcaacaaaAAAAAAAATTCTGT-AAAAGCAGGGGAAAAATCacagggt----ctcactcggttacccagcatgaagtacagtggtgtgatcatggctcatggcaaccttgaattctcaagcacaagtgattctcccacctcagcctatggagtagctgggatcacag-ggtgtgccacAGTGTCCACATGCATGGGTATTTGGTGGAT i rheMac8.chr13 N 0 C 0 s macNem1.NW_012014799v1 656594 273 + 11597128 ggaaatttcctatttgccctctaaaggtttgcagaaaatgaatggacaaaacacaaattaatagaagaaagaggc--------aaaaaattCTGCGAAAAGCAGGGGAAAAATCacagggtctcactcactcggttgcccagcatgaagtgcagtggtatgatcgtggctcattgtaaccttgagttctcaagtgcaaacagttctccaacctcagcctacggagtagctgggataacagtggtgtgccaccatgcccACATACATGGGTATTTGCCGGAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 164515 272 + 5626091 ggaaatttcctatttgctctctaaaggtttgcagaaaatgaatggacaaaacacaaattaatagaagaaagaggc--------aaaaaattGTGTAAAACGCAGGGGAAAAATCacagggtctcactcactcca-tgcccagcatgaagtgcagtggtgtgaccgtggctcattgcaaccttgaattctcaagtgcaaacagttctcccacctcagcctacagagtagctgggataataggggtgtgccaccatgcccACATACATGGGTGTTTGCTGGAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90911352 274 - 107702431 ggaaatttcctatttgccctctaaaggtttgcagaaaatgaatgaacaaaacacaaattaatagaagaaagaggc-------aaaaaaattCTGTAAAAAGCAGGGGAAACATCacagggtctcactcactcggttgcccagcatgaagtgcagtggtgtgatcgtggctcattttaaccttgagttctcaagtgcaaacagttctccaacctcagcctatggagtagctgggatcacaggggtgtgccaccatgcccACATACATGGGTATTTGCTGGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 211837 273 + 521157 ggaaatttcctatttgccctctaaaggtttgcagaaaatgaatggacaaaacacaaattaatagaagaaagaggc--------aaaaaattCTGTAAAAAGCAGGGGGAAAATCacagggtctcactcactcggttgcccagcatgaagtgcagtggtgtgatcgtggcttattgcaaccttgagttctcaagtgcaaacagttctccaacctcagcctacgaagtagctgggataacaggggtgtgccaccatgcccACATACATGGATATTTGCTGGAG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 142230 271 + 1278784 agaaacttcctatttgccctctaaaggtttgcagaaaatgaatgggcaaaacacaaattaatagaagaaagaggc------aaacaaaattgtgtaaaatgcaGGGAAAAAATCacagggt----ctcactcagttacccagcatgaagtgcagtactataatcacggctcatagcaatcttgaattctcaagtgcaagtgattctcccacctcagcctatggagtagctgggatcacatggatgtgccaccatgcccACATACATGGGTATTTGCTGGAT i colAng1.NW_012118465v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=453324.000000 s hg38.chr14_KI270725v1_random 80237 129 + 172810 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGTTGGCTGGCATCTGGGTAAGGATGACATTACC--TCATTGCTAAAGAGTAAAAGAGGAAAGTGTCATGGATAGTGCAAG-CAGGGACATGCCCTGA s panTro5.chrY 316830 129 + 26350515 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGTGGCTGGCATCTGGGTAAGGATGACATTCCC--TCATTGCTAAAGACTAAAAGAGGAAAGTGTCATGGATAGTGCAAG-CAGGGACATGCCCTGA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 31733 129 + 57002 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGTGGCTGGCATCTGGGTAAGGATGACATTCCC--TCATTGCTAAAGAGTAAAAGAGGAAAGTGTCATGGATAGTGCAAG-CAGGGACATGCCCTGA i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 33635 128 - 108979918 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGTGGCTGGCATCTGGGTAAGGATGACATTCCC--TCATTGCTAAAGAGTAAA--GGGAAAGTGTCATTGATAGTGCAAGAcaggaacatgccctca i rheMac8.chr13 C 0 C 0 s macNem1.NW_012014799v1 656867 130 + 11597128 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGTGGCTGGCATCTGGGTAAGGATGACGTTCCC--TCATTGCTAAAGAGTAAAAGAGGAAAGTGTCATTGATAGTGCAAGGCAGGGACACGCCCtga i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 164787 130 + 5626091 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGTGGCTGGCATCTGGGTAAGGATGACGTTCCC--TCATTGCTAAAGAGTAAAAGAGGAAAGTGTCATTGATAGTGCAAGGCAGGGACACaccctga i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90911626 130 - 107702431 AGGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGTGGGTGGCATCTGGGTAAGGATGATGTTCCC--TCATTGCTAAAGAGTAAAAGAGGAAATTGTCATTGATAGTGCAAGGCAGGGACACGCCCtga i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 212110 128 + 521157 AGGAGATGGAGA--CTCTGTCCTGGATGTGAG-ACAGGTGGCTGGCATCTGGGTAAGGATGACGTTCCC--TCATTGCTAAAGAGTAAAAGAGGAAAGTGTCATTGATAGTGCAAGGCAGGGACACGCCCTGA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 142501 128 + 1278784 AAGAGATGGAGACTCTCTGTCCTGGATGTGAG-ACAGGAAGCTGATATCTGGCTAAGGATGATGTTCCC--TCATTGCTAAAGAGTAAG--AGGAAAGTGTCATTGATAGTGCAAGGCAGGGACATGCCCTGA i colAng1.NW_012118465v1 C 0 C 0 s tarSyr2.ABRT02317507v1 2931 133 + 4725 AGGAGATGGAGACTCTCTCTCTTGGATGTGAGAATGGGATGCTGGTGTCTGGGTCTAGATGATGTCCCCATTCACTGCTAAAGGATAAAAGAGGAAAGTGTCATTGATAGTGCTCAGCAAGAACATGCTCCAA i tarSyr2.ABRT02317507v1 N 0 N 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=7200.000000 s hg38.chr14_KI270725v1_random 80366 2 + 172810 CC s panTro5.chrY 316959 2 + 26350515 CC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 31862 2 + 57002 CC i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 33763 2 - 108979918 cc i rheMac8.chr13 C 0 C 0 s macNem1.NW_012014799v1 656997 2 + 11597128 cc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 164917 2 + 5626091 cc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90911756 2 - 107702431 cc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 212238 2 + 521157 CC i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 142629 2 + 1278784 CC i colAng1.NW_012118465v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=546220.000000 s hg38.chr14_KI270725v1_random 80368 175 + 172810 TAGTGAGGTCCAGAGGCTTATATTGTCCTTCATAGGGGAGTGGGAAGAAGCGAGTGTAGGCAACCCAGGGGAAATAAATGACCTAAAATAAAAGAAATAGATCATCAGAAGTGTAGAtgtattagtcagggttctctagagtgacagaattaaaggactatatacat------------------------------------------atatatat s panTro5.chrY 316961 175 + 26350515 TAGTGAGGTCCAGAGGCTTATATTGGCCTTCATAGGGGAGTGGAAAGAAGCGAGTGTAGGCAACCCAGGAGAAATAAATGACCTAAAATAAAAGAAATAGATCATCAGAAGTGTAGAtgtattagtcagggttctctagagtgacagaattaaaggactatatatat------------------------------------------atatgtat i panTro5.chrY C 0 I 75 s gorGor5.CYUI01002012v1 31864 174 + 57002 TAGTGA-GTCCAGAGGCTTATATTGTCCTTCATAGGGGAGTGGGAAGAAGCGAGTGTAGGCAACCCAGGGGAAATAAATGACCTAAAATAAAAGAAATAGATCATCAGAAGTGTAGACgtattagtcagggttctctagagtgacagaattaaaggactatatacat------------------------------------------atatatat i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 33765 172 - 108979918 cagtgaggtccagaggcttata-tatccttcataggggagtgggaagaagagagtgtaggcaacccaggggaaacaaatgaCCCAAAATAAAAGAAACAGGTCATCAGAAGTGTAGAtgtattagtcagggttctctagagtgacagaattaaaggactatatacat--------------------------------------------atatat i rheMac8.chr13 C 0 C 0 s macNem1.NW_012014799v1 656999 174 + 11597128 cagtgaggtccagaggcttata-cgtccttcataggggagtgagaagaagagagtgtaggcaACCCAGGGGAAACAAGTGACCTAAAATAAAGGAAAGAGGTCATCAAAAGTGTAGAtgtattagtcagaattctctagagtgacagaattaaaggactatgcacat------------------------------------------aaatatat i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 164919 174 + 5626091 cagtgaggtccagaggcttata-tgtccttcataggggggtgagaagaagagagtgtaggcaACCCAGGGGAAACAAGTGACCTAAAATAAAAGAAAGAGGTCATCAAAAGTGTAGAtgtattagtcagggttctctagagtgacagaattaaaggactatgcacat------------------------------------------aaatatat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90911758 174 - 107702431 cagtgaggtccagaggcttata-cgtccttcataggggagtgagaagaagagagtgtaggcaACCCAGGGGAAACAAGTGACCTAAAATAAAGGAAAGAGGTCATCAAAAGTGTAGAtgtattagtcagggttctctagagtgacagaattaaaggactatgcacat------------------------------------------aaatatat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 212240 174 + 521157 CAGTGAGGTCCAGAGGCTTATA-CGTCCTTCATAGGCGAGTGAGAAGAAGAGAGTGTAGGCAACCCAGGGGAAACAAGTGACCTAAAATAAAGGAAAGAGGTCATCAAAAGTGTAGAtgtattagtcagggttctctagagtgacagaattaaaggactatgcacat------------------------------------------aaatatat i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 142631 212 + 1278784 TAGTGACATCCAGAGACTCATA-TGTTGTACATAGGGGAGTGGGAAGAAGAGAGTGTAGGAAACCCAGGGGAAAAAAATGAACTAAAATAAAAGAAATAGGTCATCAAAAGTGTGGAtgtatt----agggttctctagagcgacagaaataaagaaatatatatatatataCACACACACACACatatatgtatgcatatatatatatatatatat i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90629915 146 - 108792865 tagtaaggtccagatggttata-tgtccttcacaggggagtggaaagaggggagtatagggaacccagggcaaataaatgaACTAAAATAAAAGAAATGGGTCATCAAGTGAGTATATATAT-------AGTCCCTTG---------------------ATGTATAT------------------------------------------ATACATAT i calJac3.chr14 N 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=678854.000000 s hg38.chr14_KI270725v1_random 80543 256 + 172810 gaaagggagtgacatggttaataatgagtgtcaacttgataggattgagagatatgaagtattgatccagggtgtgtctgtgagagtgttgccgaaagagattaac---atttgagtcagtgggctggggaaggcaga-cccacccttaatctggtgggcacaatctaatctgctgccagcaaatataaatcaggcagaaaaatttgaaaaggagagactggcctagcctcccagcctacatctttctcccatgctggtt s gorGor5.CYUI01002012v1 32038 256 + 57002 gaaggggagtgagatggttaataatgagtgtcaacttgataggattgagggatatgaagtattgatccagggtgtgtctgtgagagtgttgccgaaagagattaac---atttgagtcagtgggctggggaaggcaga-cccacccttaatctggtgggcacaatctaatctgctgccagcaaatataaagcaggcagaaaaatttgaaaaggagagactggcctagcctcccagcctacatctttctcccatgctggtt i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 33937 260 - 108979918 gaaggggagtgtgatggttaattgcgagtgtaaacttgataggattgagggatacgcagtatagatcctgggtgtttctgtgagggtgttgccaaaagagatgaacatttgttgagtctgtgggctgaggaaggcaaaccccacccataatctggtgggcacaatctaatcagctgccagcaaatataaagcaggcagaaaaatgtgaaaaggagagactgccctagcctcccagcccacatctttcccccatgctggat i rheMac8.chr13 C 0 C 0 s macNem1.NW_012014799v1 657173 255 + 11597128 gaa-gggagtgtgatggttaatagtgagtgtcaacttcataggattgagggacacaaagtatggatcctgggtgtttctgtgagggtgttgccaaaagaggttaac---ttttgagtccgtgggctggggaaggcagaccccacccataatctggtaggcacaatctaatcagctgccagcaaatataatgcaggcag-aaagtttgaaaaagagagactggcctagtctcccagcctacatctttctcccatgctggat i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 165093 257 + 5626091 gaaggggaGtgtgatggttcatagtgagtgtcaacttgataggattgagggacacaaagtatggaacctgggtgtttctgtgagggtgttgccaaaataggttaac---ttttgagtccgtgggctggggaaggcagaccccacccataatccggtgggcacaatctaatcagctgccagcaaatataacgcaggcagaaaagtttgaaaaagagagactggcctagtctcccagcctacatctttctcccatgctggat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90911932 256 - 107702431 gaa-gggagtgtgatggttaatagtgagtgtcaatttgataggattgagggacacaaagtatggatcctgggtgtgtctgtgagggtgttgccacaagaggttaac---ttttgagtccgtgggctggggaaggcagactccacccataatctggtgggcacaatctaatcagctgctggcaaatataacgcaggcagaaaagtttgaaaaagagagactggcctagtctcccaggctacatctttctcccatgctggat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 212414 254 + 521157 gaa-gggagtgtgatggttaatagtgtgtgtcaacttgataggattgagggacacaaagtatggaacctgggtgtttctgtgagggtgttgccaaaagaggttaac---ttttgagtccgtgggctggggaaggcagaccccacccgtaatctggtaggcacaatctaatcagctgccagcaaatataatgcaggcag-aaagtttgaaaaagagagactggccta-tctcccagcctacatctttctcccatgctggat i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 142843 256 + 1278784 GATGGGGAGTTtgatgattaatactgagtgtcaacttgacagtattgagggatacagagtatcgatcttgggtgtgcccgtgagggtgttacccaaagagattaac---atttgaatcagtggactagggaaggcagg-tccacccttaatctggtgggcacaatttaattagctgccagtaaatataaagcaggtagaaaaatgtgaaaaggagagactggcctagcctcacagcctacatatttctcccatgctggat i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90630061 253 - 108792865 AAATGGAAGtgtgatggttaatattgagtgtcaacttgatagaattgaaggataccaagtattgatcatgggagtgtctgtgagggtgtcgccaaaagagataaac---atttgagtcagtgggctggggaaggcaga-tccacctctaatctgttgggcatgatctaatccactgccagcaaatataaagcaggcagatag---tgaaaaggagagactggcctagcctcccagcctacatctttctccaattctggac i calJac3.chr14 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I e panTro5.chrY 317136 75 + 26350515 I a score=88971.000000 s hg38.chr14_KI270725v1_random 80799 28 + 172810 tcttcctgccctcaaacattggactcca s panTro5.chrY 317211 28 + 26350515 Tcttcctgccctcaaacactggactcaa i panTro5.chrY I 75 C 0 s gorGor5.CYUI01002012v1 32294 28 + 57002 tcttcctgccctcaaacattggactcca i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34197 28 - 108979918 gcttcctgccctcaaacattggacttca i rheMac8.chr13 C 0 I 24 s macNem1.NW_012014799v1 657428 28 + 11597128 gctttttgccctcgaacattggactcca i macNem1.NW_012014799v1 C 0 I 24 s cerAty1.NW_012001187v1 165350 28 + 5626091 gttttttgccctagaacattggagtcca i cerAty1.NW_012001187v1 C 0 I 24 s chlSab2.chr14 90912188 28 - 107702431 gctttttgccctagaacattggactcca i chlSab2.chr14 C 0 I 24 s manLeu1.NW_012101586v1 212668 28 + 521157 gctttttgccctagaacattggactcca i manLeu1.NW_012101586v1 C 0 I 24 s colAng1.NW_012118465v1 143099 28 + 1278784 gcttcctgccctcgaacgtcagactcca i colAng1.NW_012118465v1 C 0 I 12 s calJac3.chr14 90630314 28 - 108792865 acttcctgccctcaaacatcagactcca i calJac3.chr14 C 0 I 24 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=66678.000000 s hg38.chr14_KI270725v1_random 80827 15 + 172810 tggctctcctttctc s panTro5.chrY 317239 15 + 26350515 tggctctcctttctc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32322 15 + 57002 tggctctcctttctc i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34249 15 - 108979918 tgtcgcttctttctc i rheMac8.chr13 I 24 C 0 s macFas5.chr10 61750322 15 - 96509753 tggctctcctttctc i macFas5.chr10 N 0 C 0 s macNem1.NW_012014799v1 657480 15 + 11597128 tggctctcctttctc i macNem1.NW_012014799v1 I 24 C 0 s cerAty1.NW_012001187v1 165402 15 + 5626091 tggctctcctttctc i cerAty1.NW_012001187v1 I 24 C 0 s chlSab2.chr14 90912240 15 - 107702431 cagctctcctttctc i chlSab2.chr14 I 24 C 0 s manLeu1.NW_012101586v1 212720 15 + 521157 cggctctcctttctc i manLeu1.NW_012101586v1 I 24 C 0 s colAng1.NW_012118465v1 143139 15 + 1278784 tggttctcctttctc i colAng1.NW_012118465v1 I 12 C 0 s calJac3.chr14 90630366 15 - 108792865 tggctctccttgctc i calJac3.chr14 I 24 I 1 e ponAbe2.chrUn 2077554 13412 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=180794.000000 s hg38.chr14_KI270725v1_random 80842 54 + 172810 atcagtttgcagacagcccattgtgtaacttatgatcctgtaag-------ttaataaact s panTro5.chrY 317254 54 + 26350515 atcagtttgcagacagcccattgtgtaacttatgatcctgttag-------ttaataaact i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32337 54 + 57002 atcagtttgcagacagcccattgtgtaacttatgatcctgtaag-------ttaataaact i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34264 54 - 108979918 atcggtttgcagacagcccgttgtggaacttatgatcctttaag-------ttaatagact i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61750337 53 - 96509753 atagatttgcagacagcccattgtggaacttatgatcctttaag-------ttagtaaac- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 657495 54 + 11597128 atagatttgcagacagcccattgtggaacttatgatcctttaag-------ttagtaaaca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 165417 54 + 5626091 atggatttgcagacagcccattgtggaacttatgatcctttaag-------ttagtaaaca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90912255 54 - 107702431 atggatttgcagacagcccattgtggaacttatgatcctttaag-------ttagtaaaca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 212735 54 + 521157 atggatttgcagacagcccattgtggaacttatgatcctttaag-------ttagtaaaca i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 143154 61 + 1278784 atcagtttgcagacagttcattgtggaacttacaatcctgtaagttaatacttaataaact i colAng1.NW_012118465v1 C 0 I 36 e ponAbe2.chrUn 2077554 13412 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=15268.000000 s hg38.chr14_KI270725v1_random 80896 14 + 172810 cccctttat------aaata s panTro5.chrY 317308 14 + 26350515 cccctttat------aaata i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32391 14 + 57002 cccctttat------aaata i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34318 14 - 108979918 cccctatat------atata i rheMac8.chr13 C 0 I 18 s macFas5.chr10 61750390 5 - 96509753 ---------------acaca i macFas5.chr10 C 0 I 18 s macNem1.NW_012014799v1 657549 20 + 11597128 tctctatatatatatataca i macNem1.NW_012014799v1 C 0 I 18 s cerAty1.NW_012001187v1 165471 20 + 5626091 tccatatatatatatataca i cerAty1.NW_012001187v1 C 0 I 30 s chlSab2.chr14 90912309 14 - 107702431 tccatatat------atata i chlSab2.chr14 C 0 T 93570 s manLeu1.NW_012101586v1 212789 14 + 521157 tccatatat------atata i manLeu1.NW_012101586v1 C 0 I 18 e ponAbe2.chrUn 2077554 13412 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143215 36 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=-5603.000000 s hg38.chr14_KI270725v1_random 80910 10 + 172810 aatatatATA---------- s panTro5.chrY 317322 10 + 26350515 aatatatAta---------- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32405 10 + 57002 aatatatata---------- i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34350 10 - 108979918 --tttgtctg--------tg i rheMac8.chr13 I 18 C 0 s macFas5.chr10 61750413 10 - 96509753 --tgtatcta--------tg i macFas5.chr10 I 18 C 0 s macNem1.NW_012014799v1 657587 10 + 11597128 --cacacata--------ta i macNem1.NW_012014799v1 I 18 C 0 s cerAty1.NW_012001187v1 165521 10 + 5626091 --tatgtgtg--------tg i cerAty1.NW_012001187v1 I 30 C 0 s chlSab2.chr14 90818753 14 - 107702431 --CACACATAGGGg----tg i chlSab2.chr14 T 93570 C 0 s manLeu1.NW_012101586v1 212821 18 + 521157 --cacacacacacaccccta i manLeu1.NW_012101586v1 I 18 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143215 36 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=117314.000000 s hg38.chr14_KI270725v1_random 80920 60 + 172810 tgtgtgtgtg-tgtgt--gcatatatatatgtatgtgtgtgtgtATAtatatatgtatatatc s panTro5.chrY 317332 62 + 26350515 tatatgtgtg-tgtgtttgcatatatatatgtatgtgtgtgtgtatgtatatatAtatatatg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32415 61 + 57002 tatgtgtgtg-tgtga-tatatatatgtatgtgtgtgtatgtatatatatatatgtatatatc i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34360 60 - 108979918 tatgtgtatt-tatgt--gtgtgtgtgtataaatatgtgtgtgtatgtgtatatatatatata i rheMac8.chr13 C 0 I 2 s macFas5.chr10 61750423 60 - 96509753 tatctatcta-tctat--gtgtctatctatctatctatctatctatctatctatctatctatc i macFas5.chr10 C 0 I 2 s macNem1.NW_012014799v1 657597 60 + 11597128 tgtgtgtgtg-tgtat--ctatctatctatctatctatctatctatctatctatctatctatc i macNem1.NW_012014799v1 C 0 I 2 s cerAty1.NW_012001187v1 165531 60 + 5626091 tgtgtgtgta-tctat--ctatctatctatctatctatctatctatctatctatctatctatc i cerAty1.NW_012001187v1 C 0 I 2 s chlSab2.chr14 90818767 60 - 107702431 tgtgcttgtg-tgtgt--atgtatatgtatgtgtgcatatatatatatacacatatatatata i chlSab2.chr14 C 0 I 93580 s manLeu1.NW_012101586v1 212839 60 + 521157 tatatatatg-tgtgt--gtgtgtatctatctatctatctatctatctatctatctatctatc i manLeu1.NW_012101586v1 C 0 I 22 s colAng1.NW_012118465v1 143251 61 + 1278784 tgtgtgtgtgctgtgt--gtgtatgtatatgtatgtgtgcatatatatttttatatatatata i colAng1.NW_012118465v1 I 36 I 2 e ponAbe2.chrUn 2077554 13412 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=563887.000000 s hg38.chr14_KI270725v1_random 80980 158 + 172810 ctgtta----gtt-----ctgtccctctagatgtcactgtctaatacaggaagtttattaagtattaactcacacaatcaccaagtctcacaataggccatctgctggatgaggag-caaaaagagccagccagagttccaaaactgaagaacttggagtccatgttc s panTro5.chrY 317394 162 + 26350515 catatatcctgtt-----ctgtccctctagatgtaactggctaatacaggaagtttattaagtattaactcacacaatcaccaagtctcacaataggccatctgctggatgaggag-caaaaagagcaagccagagttccaaaactgaagaacttggagtccatgttc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32476 158 + 57002 ctgtta----gtt-----ctgtccctctagatgtcactggctaatacaggaagtttattaagtattaactcacacaatcaccaagtctcacaataggccatctgctggatgaggag-caaaaagagccagccagagttccaaaactgaagaacttggagtccatgttc i gorGor5.CYUI01002012v1 C 0 C 0 s rheMac8.chr13 34422 164 - 108979918 CTGTTA----GTTCTGTGCTGTGCCTCTAGATGTCACTGGTTAatataggaagtttattaagtagtaactcactcaatcaccaggtctcacaataggccatctgctggctgaggagaaaaaaagagccagccagagttccaaaactgaagaactaggagtccatgttc i rheMac8.chr13 I 2 I 1998 s macFas5.chr10 61750485 158 - 96509753 ctgtta----gtt-----ctgtccctctagaggtcactcactaatacaggaagtttattaagtattaactcactcaatcaccaggtctcacaatatgccatctcctggctgaggag-caaaaagagctggccagagttccaaaactgaagaacttggagtccatgttc i macFas5.chr10 I 2 C 0 s macNem1.NW_012014799v1 657659 158 + 11597128 ctgtta----gtt-----ctgtccctctagatgtcactcactaatacaggaagtttattaagtattaactcactcaatcaccaggtctcacaatatgccatctcctggctgaggag-caaaaagagctggccagagttccaaaactgaagaacttggagtccatgttc i macNem1.NW_012014799v1 I 2 C 0 s cerAty1.NW_012001187v1 165593 158 + 5626091 ctgtta----gtt-----ctgtccctctagatgtcactcactaatacaggaagtttattaagtattaactcactcaatcaccaggtctcacaataggccatctcctggctgaggag-caaaaagagccgaccagagttccaaaactgaagaccttggagtccatgttt i cerAty1.NW_012001187v1 I 2 C 0 s chlSab2.chr14 90912407 158 - 107702431 ctgtta----gtt-----ctttgcctctagatgtcactcactaatacaggaagtttattaagtattaactcactcaatcaccaggtctcacaataggccatctcctgggtgaagag-caaaaagagcctaccagagttccaaaactgaagaccttggagtccatgttt i chlSab2.chr14 I 93580 C 0 s manLeu1.NW_012101586v1 212921 158 + 521157 ctgtta----gct-----ctgtccctctagatgtcactcactaatacaggaggtttattaagtattaactcactcaatcaccaggtctcacaataggccatctcctggctgaggag-caaaaagagccgaccagagttccaaaactgaagaccttggagtccatgttt i manLeu1.NW_012101586v1 I 22 C 0 s colAng1.NW_012118465v1 143314 158 + 1278784 CTGTTA----GTT-----CTGTCCCTCTATGTGTCACTTGCTAATACAggaagtttattaagtagtaactcaaacaatcagaaggtctcacaataggccatctgccggctaaggag-caagtagagccaaccagagttccaaaactgaagaactaggagttcatgtta i colAng1.NW_012118465v1 I 2 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=975999.000000 s hg38.chr14_KI270725v1_random 81138 339 + 172810 gagggcaagaagcatccagcatgggagaaagatgtaggctgggaggcgaggcccgtctcttttcacatttttctgcctgct-------------tatagtatggctgggttggcagctgattggattgtgcccacacagattaagggtgggtctgcctttcccagcccactgactcacatgttaatctttttttggcaacaccctcacagacacacccaggatgaatactttacatccttcaatccaatcaagttgacactcattataaaccatcataagcccaccccttgtgaacttgaacccacgcacatctcctgagatcatacataatcttaaaatacagacaatagt s panTro5.chrY 317556 339 + 26350515 gagggcaagaagcatccagcatgggagaaagaagtaggctgggaggcgaggcccgtctcttttcacgtttttctgtctgct-------------tatagtatggctgggttggcagctgattggattgtgcccacatcgattaagggtgggtctgcctttccgagcccgctgactcacatattaatctttttttggcaacaccctcacagacacacccaggatgaatactttacatccttcaatccaatcaagttgacactcattattaaccatcacaagcccaccccttgtgaaattcaacccacacacatctcctgagatcatacataatcttaaaatacagacaatagt i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32634 338 + 57002 gagggcaagaagcatccagcatgggagaaagatgtaggctgggaggcgaggcccgtctcttttcacatttttctgcctgct-------------tatagtatggctgggttggcagctgattggattgtgcccacacagattaagggtgggtctgcctttcccagcccactgactcacatgttaatctttttttggcaacaccctcacagacacacccaggatgaatactttacatccttcaatccaatcaag-tgacactcattattaaccatcacaagcccaccccttgtgaacttgaacccacacacatctcctgagatcatacataatcttaaaatacagacaatagt i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61750643 338 - 96509753 aagggcaggaagcatccagcacaggagaaagatgtaggctgggaggctaggcccgtctcttttcacatttttctgcctgct-------------tatagtctagctgtgttggcagctgattgcattgtgcccacgaagattaagggtgggtctgccttccccagcccactgactcaaatgttaatc-tcctttggcaacaccctcacagacacacccaggatcaacactttacatccttcaatccaatcaaattgaaactcagtattaaccatcacCagcccaccccctgtcaactggaacccacacacatctcctgagatcaaacataatgttaaaatacagacaatagt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 657817 338 + 11597128 gagggcaggaagcatccagcacaggagaaagatgtaggctgggaggctaggcccgtctcttctcacatttttctgcctgct-------------tatagtctagctgtgttggcagctgattgcattgtgcccacaaagattaagggtgggtctgccttccccagcccactgactcaaatgttaatc-tcctttggcaacaccctcacagacacacccagaatcaacactttacatccttcaatccaatcaaattgaaactcagtattaaccatcacCagcccaccccctgtcaactggaacccacacacatctcctgagatcaaacataatgttaaaatacagacaatagt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 165751 337 + 5626091 gaggacaggaagcatccagcacaggagaaagatgtaggctgggaggctaggctcgtctcttctcacatttttctgcccgct-------------tatagtctagctgtgttggcagctgattgtattgtgctcatgcagattaagggtgaatctgcctttcccagcccactgactcaaatgttaatc-tcctttggcaaca-cctcacagacacacccaggatcaacactttacatccttcaatccaatcaaattgaaactcagtattaaccatcacCagcccaccccttgtcaactggaacccacacacatctcctgagatcaaacataatgttaaaatacagacaatagt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90912565 337 - 107702431 gagggcaggaagcatccagcacaggagaaagatgtaggctgggaagctaggctcatctcttctcacatttttctgcccgct-------------tatagtctagctgtgttggcagctgattgtattgtgctcacgcagattaagggtgattctgcctttcccagcccactgactcaaatgttagtc-tcctttggcaaca-cctcacagacacaccgaggatcaacactttacatccttcaatccaatcaaattgaaactcagtattaaccatcacCagcccaccccttgtcaactggaacccacacacatctcctgagatcaaacataatgttaaaatacagacaatagt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 213079 351 + 521157 gaggacaggaagcatccagcacaggagaaagatgtaggctgggaggctaggcccatctcttctcacatttttctgcctgctattttcctgcctgtatagtctagctgtgttggcagctgattgcattgtgcccacgaagattaagggtgggcctgccttccccagcccactgactcaaatgttaatc-tcctttggcaacaccctcacagacacacccaggatcaacactttacatccttcaatccaatcaaattgaaactcagtattaaccatcacCagcccactccttgtcaactggaacccacacacatttcctgagatcaaacataatgttaaaatacagacaatagt i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 143472 338 + 1278784 gagaacaggaagcatccagcacaggagaaagatgtaggctgggagggtaggcctgtctcttttcacatttttctgcctgct-------------tatagtctagctgtgttggcaggtgattggattgtgcccacacagattaatggtgggtctgcctttcccagcccactgactaaaatgataatc-atttttggcaacaccctcacagacacacccaggatcaacactttacatccatcaatccaatcaagtaaacagtcagtattaaccttcacaAGCAcaccccttgcctacttgaacacatacacatctcctgagataatatataatcttaaaatacagacaatagt i colAng1.NW_012118465v1 C 0 C 0 e ponAbe2.chrUn 2077554 13412 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1202.000000 s hg38.chr14_KI270725v1_random 81477 1 + 172810 t s panTro5.chrY 317895 1 + 26350515 a i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32972 1 + 57002 a i gorGor5.CYUI01002012v1 C 0 C 0 s ponAbe2.chrUn 2090966 1 + 72422247 g i ponAbe2.chrUn I 13412 I 3202 s macFas5.chr10 61750981 1 - 96509753 a i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 658155 1 + 11597128 a i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 166088 1 + 5626091 a i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90912902 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 213430 1 + 521157 a i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 143810 1 + 1278784 a i colAng1.NW_012118465v1 C 0 C 0 e calJac3.chr14 90630381 1 - 108792865 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=152886.000000 s hg38.chr14_KI270725v1_random 81478 53 + 172810 aggtcataattacccc-aacataata-aactatccttcctacaactggaaatgca s panTro5.chrY 317896 54 + 26350515 aggtcataattacccctaacataata-aactatccttcctacaactggaaatgca i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 32973 54 + 57002 aggtcataattacccctaacataata-aactatccttcctacaactggaaatgca i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61750982 55 - 96509753 aggtcatggttacctctaacataatacaactatgcttcctacaactgaaaatgta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 658156 55 + 11597128 aggtcatggttacctctaacataatacaactatgcttcctacaactgaaaatgca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 166089 55 + 5626091 aggtcatagttacccctaacataatacaactatgctttctacaactggaaatgca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90912903 55 - 107702431 aggtcatagttacccctaacataatacaactatgcttcctacaactggaaatgca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 213431 55 + 521157 aggtcatggttacctctaacataatacaactatgcttcctacaactggaaatgca i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 143811 55 + 1278784 aggtcatagctacccctaatgtaaaacaactatccttcctacaactggaaatgca i colAng1.NW_012118465v1 C 0 I 59212 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=669887.000000 s hg38.chr14_KI270725v1_random 81531 294 + 172810 ccaatcctcaacccaaatactattacataaagtaaacaatacttaaatgctgatatgaggtgagcaaatc-tatgtcacctgataaagaaaagggaaatgaaatgaagatattttcttagtacaagtgcatacatgcacaaacatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcatttctgcagctggtcaggtggtcgtagctggtattgataactactttcttccactattcattctgtattccctttgccttcagcaagcagctcagcaggtcg s panTro5.chrY 317950 294 + 26350515 tcaatccccaacctaaatactattacataaagcaaacaatacttaaatgctgatatgaggtcagtaaatc-tatgtcacctgataaagaaaagggaaatgaaatgaagatattttcttagtacaaatgcatacatgcacaaacatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcatttctgcagctggtcaggtggtcgtagctggtattgataactactttcttccactatacattctgtattccctttgccttcaacaagcacctcagcaggttg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 33027 293 + 57002 cc-atccccaacccaaatactattacataaagtaaacaatacttaaatgctgatatgaggtcagcaaatc-tatgtcacctgataaagaaaagggaaatgaaatgaagatattttcttagtacaagtgcatacatgcacaaacatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcatttctgcagctggtcaggtggtcgtagctggtattgataactactttcttccactattcattctgtattccctttgccttcagcaagcacctcagcaggtcg i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61751037 290 - 96509753 ccaatccccaacccaaaaactattacacaaaatgaacaatacctaaatgctcatatgaggtcaataaatcttatgtcacctgatagagaaaccg-----gaaatgaagataatttcttagtacaagtgtatacgtgcacaaatatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcctttctgcagctggtcacgtggttgtagctgatattgatcactaccttcttccactactcattctgtattccctttgccttcagcaagcacctcaggaagtcg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 658211 290 + 11597128 ccaatccccaacccaaaaactattacacaaaatgaacaatacctaaatgctcatatgaggtcaataaatcttatgtcacctgatagagaaaccg-----gaaatgaagataatttcttagtacaagtgtatacgtgcacaaatatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcctttctgcagctggtcacgtggttgtagctgatattgatcactaccttcttccactactcattctgtattccctttgccttcagcaagcacctcaggaagtcg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 166144 290 + 5626091 ccaatccccaacccaaaaactattacacaaaatgaataatacttaaatgctcatatgaggtcaataaatcttatgtcacctgatagagaaaccg-----gaaatgaagataatttcttagtacaagtgtatacatgcacaaatacgtttttaacaaaagaagaaggaaatattcatgatagttccagtcctcctttctgcagctggtcacgtggtcatagctgatattgatcactaccttcttccactattcattctgtattgcttttgccttcagcaagcacctcagcaggtcg i cerAty1.NW_012001187v1 C 0 I 55128 s chlSab2.chr14 90912958 290 - 107702431 ccaatccccaacccaaaaactattacacaaaatgaataatacctaaatgctcatatgaggtcaataaatcttatgtcacctgatagagaaactg-----gaaatgaagataatttcttagtacaagtgtatacatgcacaaatatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcctttctgcagctggtcacatggtcatagctgatattgatcactaccttcttccactattcattctgtattgcctttgccttcagcaagcacctcagcaggtcg i chlSab2.chr14 C 0 I 60182 s manLeu1.NW_012101586v1 213486 290 + 521157 ccaatccccaacccaaaaactattacacaaaatgaacaatacctaaatgctcatatgaggtcaataaatcttatgtcacctgatagagaaaccg-----gaaatgaagataatttcttagtacaagtgtatacgtgcacaaatatgtttttaacaaaagaagaaggaaatactcatgatagttccagtcctcatttctgcagctggtcacgtggttgtagctgatattgatcactaccttcttccactattcattctgtattccctttgccttcagcaagcacctcaggaagtcg i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=138387.000000 s hg38.chr14_KI270725v1_random 81825 61 + 172810 tgacccggagaggatctggaccatttgtagtcctacctggattgggtatagtttcccattt s panTro5.chrY 318244 61 + 26350515 tggcccggagaggatctggaccattggtagtcctacctggattgggtatagtttcccattt i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 33320 61 + 57002 tgacccggagaggatctggaccatttgtagtcctacctggattgggtatagtttcccattt i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61751327 61 - 96509753 tgacccagaaaggatctcgaccatttttagtcctacctggattgggtatagtttcccattg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 658501 61 + 11597128 tgacccagaaaggatctcgaccatttgtagtcctacctggattgggtatagtttcccaccg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 221562 61 + 5626091 tgacccagaaaggatctggactatttgtagtcctacctggattgggtataatttcccattg i cerAty1.NW_012001187v1 I 55128 T 55189 s chlSab2.chr14 90973430 61 - 107702431 tggcctggacaggatcttgactatttgtagtcctacttggattgggtatagtttcccattg i chlSab2.chr14 I 60182 T 60243 s manLeu1.NW_012101586v1 213776 61 + 521157 tgacccagaaaggatctcgaccatttttagtcctacctggattgggtatagtttcccatcg i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=4775772.000000 s hg38.chr14_KI270725v1_random 81886 2041 + 172810 aacttaatcagagtgcatgataataccaagagatgccctaatggatctcctatattccatgcatactcttcctcacttccgttgtggagtagtggactgacttcatcttgatagtctgggtcaatcactgccgccaacactgtaactccattcttagcttgttgacttaaaggtaggaggaccccaaagcgtccaagtggccatcttaacttccagtttaatggaatccttattgtgtctcctggtagcaacgttcttccctctggagctaagatgactagtaaagcagaacctaatgtcgtgggaacagaaagcaaacattttgctagtgcatc----------atagtgagtggttccactttcacatccaccccttgaatcctggatctgtgaatactggctatgggagaaacaataccatacgttgggcgctgattcagagcacacatggtcttctggagtatggtgccccggcccggccaagtattgtaacctagttgacgttgtaatcgcgacctcaaaaggccgtcccaccattctatcaatccagatgcttcaggaagatggtgaatatggtaagaccagtgaattccgtgaacgtgagcccattgcctcacttcttcacctgtaaagtgagtgcttggtcagaggtaatgctgtgtggaataccgtgatagtggataaggcattccttgagtccataaatagtagtcttggcagaagcattgcatgcaggtaggtaaactcatatccggagtaagtgcctgttccaatgaggacaaacctctctcctttccatggtggaagaggtccaatataatcaacctgtcaccgggtagctggtcgatcaccccagggaatgatgccatacaaagagttcactgttagtctctgctgctgctggcaaattgggcactcagcagtggccacagacagttcagccttggtgagtggaagtccacattgctgaatccatgcatagcctccatccctgacaccatggccactatgttcatggtctcattggacaatgacaggggtgtctgaggaaagaggctgagtggtatccacagaacgggtcatcttatccacttgattatcaaaatcctcctctcctgaagtcacttgttggtcaacactcacacagggtacaaatatctt--cagtttttgaccactcagagaggtccatctacatactctttctccaagtttctttgtcaccaattttccaatcatgcttcttccaagtccctgaccatccagccaaaccattggctacagcccatgaatcagtatataaccgcacatctggaaatttctccttccatgcaaagtgcacaatcaggtgcactgctcaatgttctgcccactgggaagattttccttcaccactctccttcagggatgtcctagaaaggggctgtagtgcttcagctgtccacttttgggcggtacctgcctattgtggagaaccatctgtgaaccagaccctagtcctcccttcctgtgttaactgctcaaaggcaagtccccatgaggtcatcagtgcaggccatgggagagaaagcagggtggcagg----------gtgggcatttgagccacttcctcatgtaacttacttgtgccccccaggacctgcttgagcccaatcacttatacaccatttccatttgatgatgcaatgctgctgtgcatgacccactttatggctacatgagtcagaaagcacccagttcacgataggcagttcaggtcgcgtggtgacttgttgactcatagtcaaatgttcagtttccacaaaagcccagtataagacaagagctgtctctcaaaaggagagtagttaactggagaagatgaccacgccttgctgcaaaatactagaggactgcaccatgattcacctatagaggcctgccaaagcctcaaagcagcattcctatctgccatggacacctcagggggacccagcctccccttcattcaaggggttctgggtctgtaaactggctcaaggctggaaattgattgaggggccatgaatctctgttttt s panTro5.chrY 318305 2046 + 26350515 accttaatcagagtgcatgacaataccaggagacgccctaatggatctcctatattccatgcatactcttcctcatttccgttgtggagtagcggactgacttcatcttgatagtctgggtcaatcactgccgccaacactgtaactccattcttagcttgttgacttaaaggtaggaggaccccaaagcgtctaagtggccgtgttaacttccagtttaatagaatcgttattgtgtctcctggtagcagcattcttccctctggagataagaagactaataaagcagaacctaatgttgtgggaacagaaagcaaacattttcctagtgcatc----------atagtgagtggttccactttcacatccaccccttgaatcctggatctgtgaatcctggctatcagagaaacaataccatacattgggcgctgattcagagcacacatggtcttctggagtatggtgccccaacccggcaaagtattgtaacctagttgacgttgtaatcgcgacctcaaaaggccgtcccaccattctatcaatccagctgcttcaggaagacggggaatatggtaagaccagtgatttccgtgagcatgagcccactgcctcacttctttacctgtaaagtgagtgcttggtcagaggtaatgctgtgtggaataccgtgataatggataaggcattccttgagtccataaattgtagtcttggcagaagcattgcatgcagataggcaaacccatatcctgagaaagtgcctgttccaatgaggacaaacctctctcctttccatggtggaagaggtccaatataatcaacctgccaccgtgtagctggtcgatcaccccagggaatgatgccatacaaagggttcactgttagtctctgatgctgctggcaaattgggcactcagcagtggccacagacagttcggccttggtgagtggaagtccacattgctgaatccatgcatagcctccatccctgccacaatggccactatgttcatgggtttattggacaatgacaggggtatctgaggaaagaggctgagtggtatccacagaacgggtcatcttatccacttgattatcaaaatcctcctccgctgaagtcacttgttggtcaacactcacacagggtacaaatatctt--cagtttttgaccactcagaggggtccatctacatactctttttccaagtttctttgtcaccaattttccaatcatgcttcttccaagtccctgaccatccagccaaagcattggctacagcccatgaatcagtatataaccgcgcatctggaaatttctccttccatgcaaagtgcacaatcaggtgcactgctgaatgttctgcccactgggaagattgtccttcaccactgtccttcagggatgtcctagaaaggggctgtagtgcttcagctgtccacttttgggcggtacctgcctattgtggagaaccatctctgaaccaggccctagtcctcccttcctgtgtcaactgctcaaaggcaagtccccatgagatcatcagtgcaggccgtgggagagaaggcagggtggcaggagtagagaccgtgggcaattgagccacttcctcatgtaacttacttgtgccccc-aggacctgcttcagcccaatcacttatacatcatttccatttgatgatggagtgctgctgtgcatgacccactttatggctacatgagtcagaaagcacccagttcacgataggcagttcaggtcgcatggtgacttgttgactcatagtcaaatgttcagtttccccaaaagcccagtataggacaagagctgtctctcaaaaggagagtagttaactggagaagatgaccaggccttgctgcaaaat----gaggcctccaccatgattcacttatggaggcctgccaaagcctcaaagcagcattcctatctgccatggacacctcgaggggacccagcctccacttcattcaaggggttctgggtctgttaactgtctcaaggctggaaattgattgaggggccatgaatctctgttttt i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 33381 2050 + 57002 accttaatcagagtgcatgataataccaagagacgccctaatggatctcctatattccatgcatactcttcctcacttccgttgtggagtagcggactgacttcatcttgatagtctgggtcagtcactgctgccaacactgtaactccattcttagcttgttgacttaaaggtaggaggaccccaaagcgtccaagtggccatcttaacttccagtttaatggaatcgttattgtgtctcctggtagcagcgttcttccctctggagctaagatgactagtaaagcagaacataatgtcgtgggaacagaaagcaaacattttgccagtgcatc----------atagtgagtggttccactttcacatccaccccttgaatcctggatctgtgaatcctggctatgggagaaacaataccatacattgggcgctgattcagagcacacatggtcttctggagtatggtgccccggcccggcaaagtattgtaacctagttgacgttgtaatcgcgacctcaaaaggccgtcccaccattctatcaatccagctgcttcaggaagatggggaatatggtaagaccagtgaattccgtgagcatgagcccactgcctcacttctttacctgtaaagtgagtgcttggtcagaggtaatgctgtgtggaataccgtgatagtggataaggcattccttgagtccataaatggtagtcttggcagaagcattgcatgcaggtaggcaaacccatatccggagtaagtgcctgttccaatgaggacaaacctctctcctttccatggtggaagagttccaatataatcaacctgccaccgggtagctggtcgatcacccca-ggaatgatgccatacaaagggttcactgttagtctctgctgctgctggcaaattgggcactcagcagtggccacagacagttcagccttggtgagtggaagtccacattgctgaatccatgcatagcctccatccctgccaccatggccactatgttcatgggctcattggacaatgacaggggtgtctgaggaaagaggctgagtggtatccacagaacgggtcatcttatccacttgattatcaaaatcctcctctgctgaagtcacttgttggtcaacactcacacagggtacaaatatctt--cagtttttgaccactcagagaggtccatctacatactctttctccaagtttctttgtcaccaattttccaatcatgcttcttccaagtccctgaccatccagccaaaccattggctacagcccatgaatcagtatataaccgcacatctggaaatttctccttccatgcaaagtgcacaatcaggtgcactgctcaatgttctgcccactgggaagattgtccttcaccactgtccttcagggatgtcctagaaaggggctgtagtgcttcagctgtccacttttgggcggtacctgcctattgtggagaaccatctgtgaaccaggccctagtcttcccttcctgtgtcaactgctcaaaggcaagtccccatgaggtcatcagtgcaggccgtgggagagaaggcagggtggcaggagtagagaccgtgggcaattgagccacttcctcatgtaacttacttgtgccccccaggacctgcttgagcccaatcacttatacaccatttccatttgatgatggaatgctgctgtgcatgacccactttatggctacatgagtcagaaagcacccagttcacgataggcagttcagttcgcatggtgacttgttgactcatagtcaaatgttcagtttccacaaaagcccagtataggacaagagctgtctctcaaaaggagagtagttaactggagaagatgaccgggccttgctgcaaaatactagaggcctccaccatgattcacctatggaggcctgccaaagcctcaaagcagcattcctatctgccatggacacctcagggggacccagcctccccttcattcaaggggttctgggtctgtaaactggctcaaggctggaaattgattgaggggccatgaatctctgttttt i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61751388 2047 - 96509753 accttaatcagagtgcatgataataccaagagacgccctaatggatctcctatattccatacatactcttcgtcacttctattgtggagtagtggactgagttcatcttgatagtctgggtcaatcaccgcagccaacactgtaacaccattcttagcctgttgacttaaaggtaggaggagcccaaagtgtccaggtggccaacttaacttccggtttaatggaatcattattgtgtctcctggtggcagcgttcttccctctagaactaagatgtctagcccagcagaacataatgtcgccggaacagaaagcaaacattttgctagtggatcactagaggtaatagtgaatggtttcactttcacttccaccccttgaatcctggatctgtgaatcctggctatgggagaaacagtaccatacagtgggtgctgattcagggcatacatggccttctggagtactttgctccagccctgcaaagtattgtaacctagttga---tgtaaatgtgacctcaaaaggccgttccaccattctgtcaaacaagctgcttcaggatgatggggaacatggtaagaccagtgaattctatgagcataagccgattgccccacttctttacgtgtaaagtgagtgcttggtcagcggtaatgctgtgtggaatactgtgattgtggataaggcattgcttgagtctataaatggtagtcttggcagaagtattgtgtgcaggtaggcaaacccatattcggagtaagtgcctattccagtgaggacaaacctctctgctttccatgatggaagaggtccaatataatcaacctgccacctggtagctggtcgatcaccccacagaacggtgccatacaaagggttcattgttggtctctgctgctgctggcaaattgggcactcagcagtgatcacagacagtatagtcttggtgagtggaagttcacgttgcagaatccatgcataacctccatccttcccactatagctacaatgttcatgggttcattggacgatgacaggggtgtctggggaaagaggataagtggtattcacagaatgggtcatcttatccacttgattatcagaatcctcctctactgaagtcacttgttggtga--------atgggatacaaatatcttcacagtttttgaccactcagagaggtccatctacatactccttctccaaatttctttgtcaccaattttccaaccatgcttcttccaattctatgagcatccagccaaaccattggctacagtccatgaatcagtatataatcacacatctggaaatttctccttctacgcaaagtgcacaaccaggtgcactgctcaatgttctggccactgggaagattttccttcaccactgtccttcagggatgtcctagaaaggggctgtagtgcttcagctgcccactttcaggtggtacctgcctattgtgcagaatcatctgtgaaccaggccctagtcttcccttcctctgtcagctgctcaaagggaagtccccgtgaggtcatcggtgcaggctgtgggaaagaagacagggtggcaggagtagagatcatgggcatttgggccacttcctcaagtaacttacttgtgccccc-aggacctgcttgagcccaatcacttatataccatttccatgtgatgatggaatgctgccgcgcatgacacactttaaggctacatgaatcagaaagcacccagttcacgataggcagttcaggttgcatggtgacttgttgacccatagtcaaacgta-agtttccaccaaagcccagtataggacaagagctgtctctcaaaaggagagtagttaactccagaagatgaccgggccttgctgcaaaat-ccaagcgtctccaccatgattcacctatgggggcctaccaaagcctcaaagcagcattcctatctgccatggacacttcaaggggacccagcctccccttcattcatggggttcttggtctttaaactgcctcaagtctggaaattgattgaggggccatgaa--tctgttttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 658562 2049 + 11597128 accttaatcagagtgcatgataataccaagagacgccctaatggatctcctatactccatacatactcttcatcacttctattgtggagtagtggactgagttcatcttgatagtctgggtcaatcaccgcagccaacactgtaacaccattcttagcctgttgacttaaagataggaggagcccaaagtgtccaggtggccagcttaacttctggtttaatggaatcattattgtgtctcctggtggcagcattcttccctctagaactaagatgtctagcccagcagaacataatgtcg-cggaacagaaagcaaacattttgctagtggatctctagaggtaatagtgaatggtttcactttcacttccaccccttgaatcctggatctgtgaatcctggctatgggagaaacagtaccatacagtgggtgctgattcagagcatacatggccttctggagtactttgctccagccctgcaaagtattgtaacctagttga---tgtaaacgtgacctcaaaaggccgttccaccattctgtcaaacaagctgcttcaggatgatggggaacatggtaagaccagtgaattctatgaacataagcccattgccccacttctttacctgtaaagtgagtgcttggtcagcagtaatgctgtgtggaatactgtgattgtggataaggcattgcttgagtctataaatggtagtcttggcagaagtattgtgtgcaggtaagcaaacccatattcggagtaagtgcctattccagtgaggacaaacctctctgctttccatgatggaagaggtccaatataatcaacctgccacctggtagctggtcgatcaccccacagaacggtgccatacaaagcgttcattgttggtctctgctgctgctggcaaattgggcactcagcagtgaccacagacagtacagtcttggtgagtggaagtccacgttgcagaatccatgcataacctccatccctcccactatggctacaatgttcatgggttcattggacgatgacaggggtgtctggggaaagaggataagtggtattcacagaatgggtcatcttatccacttgattatcaaaatcctcctctactgaagtcacttgttggtga--------atgggatacaaatatcttcacagtttttgaccactcagagaggtccatctacatactccttctccaaatttctttgtcaacaattttccaaccatgcttcttccaattctatgaccatccagccaaaccattggctacagtccatgaatcagtatataatcacacatctggaaaattctccttctacgcaaagtgcacaaccaggtgcactgctcaatgttctggccactgggaagattttccttcaccactgtccttcagggatatcctagaaaggggctgtagtgcttcagctgcccactttcaggtggtacctgcctattgtgcagaatcatctgcgaaccaggccctagtcttcccttcctctgtcagctgctcaaagggaagtccccgtgaggtcatcggtgcaggctgtgggaaagaagacagggtggcaggagtagagatcatgggcatttgggccacttcctcaagtaacttacttgtgccccc-aggacctgcttgagcccaatcacttatataccatttccatgtgatgatggaatgctgccgcacatgacccactttaaggctacatgaatcagaaagcacccagttcacgataggcagttcaggttgcatggtgacttgttgacccatagtcaaacgtacagtttccaccaaagcccagtataggacaagagctgtctctcaaaaggagagtaggtaactccagaagatgaccgggccttgctgcaaaat-ccgagcgtctccaccatgattcacctatgggggcctgccaaagcctcaaagcagcattcctatctgccatggacacttcaaggggacccagcctccccttcattcatggggttcttggtctttaaactgcctcaagtctggaaattgattgaggggccatgaatctctgttttt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 166434 2048 + 5626091 accttaatcagagtgcatgataataccaagagacaccctaatggatctcctatattccatacatactcttcgtcacttctattgtggagtaggggactgagttcatcttgatagtctgggtcaatcactgcagccaacactgtaactccattcttagcctgttgacttaaaggtaggaggagcctaaagtgtccaggtggccaacttaacttccggtgtaatggaatcattattatgtctcctggtggcagcgttcttccctctagaactaagatgtctagcccagcagaacataatgtcaccggaacagaaagcaaacattttgctagtggatcactaggggtgatagtgaatggtttcactttcacttccaccccttgaatcctggatctgtgaatcctggctatgggagaaacagtaccatacattgggtgctgattcagagcatacatggctttctggagtactttgctccggccctgcaaagtattgtaacctagttga---tgtaaatgtgacctcaaaaggccgttccaccgttctgtcaaacaagctgcttcaaggtgatggggaacatggtaagatcagtgaattctatgagcataagcccattgccccacttctttacctgtaaagtgagtgcttggtcagcggtaatgctgtgtggaatactgtgattgtggataaggcattgcttgagtctataaatggtagtcttggcagaagtattgtgtgcaggtaggcaaacccatattcggagtaagtgcctattccagtgaggacaaacctctctgctttccatgatggaagaggtccaatataatcaacctgccacctggtagctggtcgatcaccccacagaatggtgccatacaaagggttcattgttggtctctgctgctgctggcaaattgggcactcagcagtgaccacagacagtacagtcttggtgagtggaagtccacgttgcagaatccatgcataacctccatccttcccactatggctacaatgttcatgggttcattggacgatgacaggggtgtctggggaaagaggataagtggtattcacagaatgggtcatcttatccacttgattatcaaaatcctcctctactgaagtcacttgttggtga--------atgggatacaaatatcttcacagtttttgaccactcagagaggtccatctacatactccttctccaaatttctttgtcaccaattttccaaccatgcttcttccaattctatgaccatccagccaaaccattggctacagtccatgaatcagtatataatcacacatctggaaaattctccttctatgcaaagtgca-aaccaggtgcactgctcaatgttctggccactgggaagattttccttcaccactgtccttcagggatatcctagaaaggggctgtagtgcttcagctgcccactttcaggtggtacctgcctattgtgcagaatcatctgtgaaccaggccctagtcttcccttcctctgtcagctgctcaaagggaagtccccgtgaggtcatcgatgcaggctgtgggaaagaagacagggtggcaggagtagagatcatgggcatttgggctacttcctcatgtaacttacttgtgccccc-aggacctgtttgagcccaatcacttatataccatttccatgtgatgatggaatgctgccgcgcatgacccactttatggctacatgaatcagaaagcacccacttcatgataggcagttcagattgcatggtgacttgttgacccatagtcaaacgtacagtttccaccaaagcccagtataggacaagagctgtctctcaaaaggagagtagttaactccagaagatgaccgggccttgctgcaaaat-ctgagcgtctccaccatgattcacctat-ggggcctgccaaagcctcaaagcagcattcctatctgccatggacacctcaaggggacccggcctccccttcattcatggggttcttggtctttaaactgcctcaagtctggaaattgattgaggggccatgaatctctgttttt i cerAty1.NW_012001187v1 T 55189 C 0 s chlSab2.chr14 90913248 2049 - 107702431 accttaatcagagtgcatgacaataccaagagacaccctaatggatctcctatattccatacatacttttcgtcacttctattgtggagtagtggactgagttcatcttgatagtctgggtcaatcaccgcagccaacactgtaactccattcttagcctgttgacttaaaggtaggaggagcccaaagtgtccaggtggccaacttaacttccggtgtaatggaatcattattatgtctcctggtggcagtgttcttccctctagaactaagatgtctagcccagcagaacataatgtcgcggaaacagaaagcaaacattttgctagtggatcactaggggtgagagtgaatggtttcacttt-acttccaccccttgaatcctggatctgtgaatcctggctatgggagaaacagtaccatacattgggtgctgattcagagcatacatggccttctggagtactttgctccggccctgcaaagtattgtaacctagttga---tgtaaatgtgacctcaaaaggccgttccaccgttctgtcaaacaagctgcttcaagttgatggggaacatggtaagaccagtgaattctatgagcataagcccattgtcccacttctttacctgtaaagtgagtgcttggtcagtggtaatgctgtgtggaatactatgattgtggataaggcattgcttgagtccataaatggtagtcttggcagaagtattgtgtgcaggtaggcaaatccatattcggagtaagtgcctattccagtgaggacaaacctctctgctttccatgatggaagaggtccaatataatcaacctgacacctggtagctggtcgatcaccccacagaatggtgccatacaatgggttcattgttggtctctgttcctgctggcaaattgggcactcagcagtgaccacagacagtacagtcttggtgagtggaagtccacgttgcagaatccatgcataacctccatccctcccactatggccacaatgttcatgggttcattggatgatgacaggggtgtctggggaaagaggataagtggtatccacagaatggatcatcttatccacttgattatcaaaatcctcctctactgaagtcacttgttggtga--------atgggatacaaatatcttcacagtttttgaccactcagagaggtccatctatatactccttctccaaatttctttgtcagcaattttccaatcatgcctcttccaattctatgaccatccagccaaaccactggctacagtccatgaatcagtatataatcacacatctggaaatttctccttctatgcaaagcacacaaccaggtgcactgctcaatgttctggccactgggaagattttccttcaccactgtccttcagggatgtcctagaaaagggctgtagtgcttcagctgtccactttcaggtggtacctgcctattgtgcagaatcatctgtgaaccaggccctagtcttcccttcctctgtcagctgctcaaagggaagtccccatgaggtcatcggtgcaggttgtgggaaagaagacagggtggcaggagtagagatcatgggcatttgggccacttcctcatgtaacttacttgtgccccc-aggacctgcttgagcccaatcacttatataccgtttccatgtgatgatggaatgctgccgcgcatgacccactttatggctacatgaatcagaaagcacccagttcacgataggcagttcaggttgcatggtgacttgttgacccatagtcaaacatacagtttccaccgaagcccagtataggacaagagctgtctctcaaaaggagagtagttaactccagaagatgaccgggccttgctgcaaaat-ccaagtgtctccaccatgattcacctgtgggggcctgccacagcctcaaagcagcattcctatctgccatggacacctcaaggggacccggcctccccttcattcatggggttcttggtctttaaactgcctcaagtctggaaattgattgaggggccatgaatctctgttttt i chlSab2.chr14 T 60243 C 0 s manLeu1.NW_012101586v1 213837 2020 + 521157 accttaatcagagtgcatgataataccaagagacgccctaatgaatctcctatattccatacacactcttcgtcacttctattgtggagtagtggactgagttcatcttgatagtctgggtcaatcaccgcagccaacattgtaacaccattcttagcctgttgacttaaaggtaggaggagcccaaagtgtccaggtggccaacttaacttccggtttaatggaatcattattgtgtctcctggtggcagcgttcttccctctagaactaagatgtctagcccagcagaacataatgtcgccggaacagaaagcaaacattttgctagtggatcactagaggtaatagtgaatggtttcactttcacttccaccccttgaatcctggatctgtgaatcctggctatgggagaaacagtaccatacagtgggtgctgattcagagcatacatggccttctggagtactttgctccagccctgcaaagtattgtaacctagttga---tgtaaatgtgacctcaaaaggccgttccaccattctgtcaaataagctgcttcaggatgatggggaacatggtaagatcagtgaattctatgagcataagcccattgccccacttctttacctgtaaagtgagtgcttggtcagcggtaatgctgtgtggaatactgtgattgtggataaggcactgcttgagtctataaatggtagtcttggcagaagtattgtgtgcaggtaggcaaacccatattcggagtaagtgcctattccagtgaggacaaacctctttgctttccatgatggaagaggtccaatataatcaacctgccacctggtagctggtcgatcaccccacagaacggtgccatacaaaggattcattgttggtctctgctgctgctggcaaattgggcactcagcagtgaccacagacagtacagtcttggtgagtggaagtccacgttgcagaatccatgcataacctccatccttcccactatggctacaatgttcatgggttcattggacgatgacaggggtgtctggggaaagaggataagtggtattcacagaatgggtcatcttatccacttgattatcaaaatcctcctctactgaagtcacttgttggtga--------atgggatacaaatatcttcacagtttttgaccactcagagaggtccatctacatactccttctccaaatttctttgtcaccaattttccaaccatgcttcttccaattctatgaccatccagccaaaccattggctacagtccatgaatcagtatataatcacacatctggaaaattctccttctatgcaaagtgcacaaccaggtgcactgctcaatgttctggccactgggaagattttccttcaccactgtccttcagggatgtcctagaaaggggctgtagtgcttcagctgcccactttcaggtggtacctgcctattgtgcagaatcatctgtgaaccaggccctagtcttcccttcctctgtcagctgctcaaagggaagtccccgtgaggtcatcggtgcaggctgtgggaaagaagacagggtggcaggagtggagatcatgggcatttgggccacttcctcatgtaacttacttgtgccccc-aggacctgtttgagcccaatcacttatataccatttccatgtgatgatggaatgctgccgcgcatgacccactttatggc------------------------------taggcagttcaggttacatggtgacttgttgacccatagtcaaacgtacagtttccaccaaagcccagtataggacaaaagctgtctctcaaaaggagagtagttaactccagaagatgaccgggccttgctgcaaaat-ccgagagtctccaccatgattcacatatgggggtctgccaaagcctcaaagcagcattcctatctgccatggacacctcgaggggacccggcctccccttcattcatggggttcttgatctttaaactgcctcaactctggaaattgattgaggggccatgaatctctgttttt i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=4202.000000 s hg38.chr14_KI270725v1_random 83927 2 + 172810 at s panTro5.chrY 320351 2 + 26350515 at i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 35431 2 + 57002 at i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61753435 2 - 96509753 ac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 660611 2 + 11597128 ac i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 168482 2 + 5626091 ac i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90915297 2 - 107702431 ac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 215857 2 + 521157 ac i manLeu1.NW_012101586v1 C 0 C 0 s nasLar1.chr13 22686395 2 - 126811233 at i nasLar1.chr13 N 0 I 358 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=802753.000000 s hg38.chr14_KI270725v1_random 83929 357 + 172810 aattccaattagtcttttatctgtttgaccttaagtttcctccttacataaattaagtaggaatgcattagttttcctgtcagtttcacttctaggaacactgtgattagttagccaatgccagagctctacatgagtcagactgttcagattgctgctttgtcttttctgcccattacggtagctacacccaccatgcctttgagggttgagtgctaccacttggcccctgccacttcaggatccaattattccaaattgtatttaacttttgtaactgagtgactgcagttctcaccattagaactgacatacagagaagagcctttacagggctcttcaaagatgcaggcgctc s panTro5.chrY 320353 357 + 26350515 aattccaattagtcttttatctgtttgaccttaagtttcctccttacataaattaagtaggaatgcattagtcttcctgtcagtttcacttctaggaacactgtgattagttagccaatgccagagctctacatgagtcagactgttcagattgctgctttgtcttttctgcccattacagtagctatgcccaccgtgcctttgagggttgagtgctaccacttggcccctgccacttcaggatcaaattattccgaattgtatttaacttctgtaactgagtgactgcagttctcaccattagatctgacatacagagaagagcctttacagggctcttcaaagatgcaggtgctg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 35433 357 + 57002 gattccaattagtcttttatctgtttgaccttaagtttcctccttacataaattaagtaggaatgcattagtcttcctgtcagtttcacttctaggaacactgtgattagttagccaatgccagagctccacatgagtcagactgttcagattgctgctttgtcttttctgcccattacggtagctacgcccaccgtgcctttgagggttgagtgctaccacttggcccctgccacttcaggatccaattattccaaattgtatttaacttttgtaactgagtgactgcagttctcaccattagatctgacatacagagaagagcctttacagggctcttcaaagatgcaggtgctg i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61753437 343 - 96509753 aattccaattagtcttttatctgtttgacctgaagtttcctccttacataaattaagtaggaatgcatttggcttcctctcagtttc--------------tgtggttaattagccaatgccagaactctacatgagttatactgttcagattgctgctttgtcttttctcaccattacagtagctatgcccaccgtacctttgagtgttgtgtgtgaccacttggcccctgccacttcaggatacgattattccaaattgtatttaaattttgtaattgagtgagtacagttcttaccgctagatctgacatacagagaagagccattacagggctcttcaaagatgcaggtgctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 660613 343 + 11597128 aattccaattagtcttttatctgtttgacctgaagtttcctccttacataaattaagtaggaatgcatttggcttcctctcagtttc--------------tgtggttaattagccaatgccagaactctacatgagttatactgttcagattgctgctttgtcttttctgaccattacagtagctatgcccaccgtacctttgagtgttgtgtgtgaccacttggcccctgccacttcaggatacgattattccaaattgtatttaaattttgtaattgagtgagtacagttcttaccgctagatctgacatacagagaagagccattacagggctcttcaaagatgcaggtgctg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 168484 343 + 5626091 aattccaattagtcttttatctgtttgacctgaagtttcctccttacataaattaagtaggaatgtattcggcttcctatcagtttc--------------tgtggttaattagccaatggcagaactctacatgagttatactgttcagattgctgctttgtcttttctgaccattacagtaactatgcccaccgtacctttgagtgttgtgtgtgaccacttggcccctgccacttcaggatacgattattccaaattgtatttaaattttgtaattgagtgagtacagttctcactgctagctcagacatacagagaagagccattacagggctcttcaaagatgcaggtgctg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90915299 357 - 107702431 aattccaattagtcttttatctgtttgacctgaagtttcctccttacataaattaagtaggaatgcattaggcttcctatcagtttcacttctaagaacactgtggttaattagccaatgccagaactctatatgagttacactgttcagattgctgccttgtcttttctgtccattacagtagctacgcccaccgtgcctttgagggttgtgtgtgaccacttggcccctgctgcttcaggatacaattattccaaattgtatttaaattttgtaattgagtgtgtacagttctcaccgctagatctgacatacagagaagagccattacagggctcttcaaagatgcaggtgctg i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 215859 357 + 521157 aattccaattagtcttttatctctttgacctgaagtttcctccttacataaattaagtaggaatgcattaggcttcctatcagtttcacttctaggaacgttgtggttaattagccaatgccagaactctacatgagttacactgttcagattgctgctttgtcttttctgaccattacagtagctatgcccacaatgcctttgagggttgtgtgtgaccacttggcccctgccgcttcaggatacaattattccaaattgtatttaaattttataattgagtaagtacagttctcacagctagatctgacaaacagagaaaagacattacagggctcttcaaagatgcaggtgctg i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e nasLar1.chr13 22686397 358 - 126811233 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1215.000000 s hg38.chr14_KI270725v1_random 84286 1 + 172810 t s panTro5.chrY 320710 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 35790 1 + 57002 t i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61753780 1 - 96509753 c i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 660956 1 + 11597128 c i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 168827 1 + 5626091 c i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90915656 1 - 107702431 c i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216216 1 + 521157 c i manLeu1.NW_012101586v1 C 0 C 0 s nasLar1.chr13 22686755 1 - 126811233 c i nasLar1.chr13 I 358 I 14 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=30988.000000 s hg38.chr14_KI270725v1_random 84287 13 + 172810 cctcacaaatcta s panTro5.chrY 320711 13 + 26350515 cctcacaaatcta i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 35791 13 + 57002 cctcacaaatcta i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61753781 13 - 96509753 cctcacaaatcca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 660957 13 + 11597128 cctcacaaatcca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 168828 13 + 5626091 cctcacaaatcca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90915657 13 - 107702431 cctcacaaatcca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216217 13 + 521157 cctcaaaaatcta i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e nasLar1.chr13 22686756 14 - 126811233 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=2384.000000 s hg38.chr14_KI270725v1_random 84300 2 + 172810 tt s panTro5.chrY 320724 2 + 26350515 tt i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 35804 2 + 57002 tt i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61753794 2 - 96509753 tt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 660970 2 + 11597128 tt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 168841 2 + 5626091 tt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90915670 2 - 107702431 tt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216230 2 + 521157 tt i manLeu1.NW_012101586v1 C 0 C 0 s nasLar1.chr13 22686770 1 - 126811233 t- i nasLar1.chr13 I 14 N 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=571580.000000 s hg38.chr14_KI270725v1_random 84302 243 + 172810 ttgcaaggtgtttgtcaagggtattaggtacagagtcactaaactccttgcctctcacgagcgatgattcattagtgtcgaatgaatttgttttgcatagctctttaaacctttcatgccaagaactgtcaatgttctctacactattaaaagtagagtccttagcattttgggatctaatcatatttagcagccaaatccagaaaccccaaaaccaacaaaagaactccaaccttaatattc s panTro5.chrY 320726 243 + 26350515 ttgcaaggtgtttgtcaaaggtaataggtacagagtcactaaactccttgcctctcacgagcgatgattcattagtgtcaaatgagtttgttttgcatagctctttaaacctttcttgccaagaactgtcaatgttctctacactattaaaagtagagtccttagcattttgggatctaatcatatttagcagccaaatccagaaaccccaagaccaacaaaagaactccaaccttaatattc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 35806 243 + 57002 ttgcaaggtgtttgtcaagggtattaggtacagagtcactaaactccttgcctctcacgagcgatgattcattagtgtcaaatgaatttgttttgcatagctctttaaacctttcatgccaagaactgtcaatattctctacaccattaaaagtagagtccttagcattttgggatctaatcatatttagcagccaaatccagaaaccccagaaccaacaaaagaactccaaccttaatattc i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61753796 242 - 96509753 ttgcagggtgtttgtcaagggtattaggtacagagtcactaaactccttgcctctcatgagagatgattcattactgtcaaatgcatttattttgcatagctctttaaactgttcatgccaaggactatcaatgttctccatactattaaaagtagagtccttagcattttggggtctaatcacacttagcagccaaatccaaaaaccccaaaaccaac-aaaaaactccattcttaatattc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 660972 243 + 11597128 ttgcagggtgtttgtcaagggtattaggtacagagtcactaaactccttgcctctcatgagagatgattcattactgtcaaatgcatttattttgcatagctctttaaactgttcatgccaaggactatcaatgttctccatactattaaaagtagagtccttagcattttggggtctaatcacacttagcagccaaatccaagaaacccaaaaccaacaaaaaaactccattcttaatattc i macNem1.NW_012014799v1 C 0 T 54952 s cerAty1.NW_012001187v1 168843 242 + 5626091 ttgcagggtgtttgtaaagggtattaggtacagagtcactaaactccttgcctctcacgagagaggattcattactgtcaaatgcatttattttgcatagctctttaaactgttcatgccaaggactatcaatgttctccatactattaaaagtagagcccttagcattttggggtctaatcatacttagcagccaaatccaaaaaccccaaaaccaac-aaaaatctccattcttaatattc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90915672 242 - 107702431 ttgcaaggtgtttgtcaagggtattaggtacagagtcactaaactccttgcctctcatgagagatgattcattagtgtcaaatgcatttattttgcatagctctttaaactgttcatgccaaggactatcaatgttctccatactattaaaagtagagtccttagcattttggggtctaatcatatttagcagccaaatcccaaaaccccaaaaccaac-aaaaaactccattcttaatattc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216232 242 + 521157 ttgcaaggtgtttgtcaagggtattaggtacagagtcactaaactccttgcctctcacgagagatgattcattagtgtcaaatgcatttattttgcatagctctttaaactgttcatgccaaggactatcaatgttctccatactattaaaagtagagtccttagcgttttggggtctaatcatacttagcagccaaatccaaaaaccccaaaaccaac-aaaaaactccattcttaatattc i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=182374.000000 s hg38.chr14_KI270725v1_random 84545 76 + 172810 tgttcctgcagaaccattcctggtaccaaaatctgtattagtgagggttctctagagggacagaactaataagttc s panTro5.chrY 320969 76 + 26350515 tgttcctgcagaaccattcctggtactaaaatctgtattagtgagggttctctggagggacagaactaataagttc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 36049 76 + 57002 tgttcctgcagaaccattcctggtaccaaaatctgtattagtgagggttctctagagggacagaactaataagTTC i gorGor5.CYUI01002012v1 C 0 C 0 s macFas5.chr10 61754038 76 - 96509753 tgttcctgtagaaccattcctggtaccaaaatctgtattagtgagggttctctagagggacagaactaataagttc i macFas5.chr10 C 0 I 14 s macNem1.NW_012014799v1 606263 73 + 11597128 tgttcctgtagaaccattcctggtaccaagaccTCtgttagtaagggctctctagagggacagaactaacagg--- i macNem1.NW_012014799v1 T 54952 I 3 s cerAty1.NW_012001187v1 169085 76 + 5626091 tgttcctgtagaaccattcctggtaccaaaatctgtattagtgagggttctctagagggacagaactaataagttc i cerAty1.NW_012001187v1 C 0 I 14 s chlSab2.chr14 90915914 76 - 107702431 tgttcctgtagaaccattcctggtaccaaaatctgtattagtgagggttctctagagggacagaactaataagttc i chlSab2.chr14 C 0 I 44 s manLeu1.NW_012101586v1 216474 76 + 521157 tgttcctatagaaccattcctggtaccaaaatctgtattagtgagggttctctacagggacagaactaataagttc i manLeu1.NW_012101586v1 C 0 I 143 e ponAbe2.chrUn 2090967 3202 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=6586.000000 s hg38.chr14_KI270725v1_random 84621 4 + 172810 tata s panTro5.chrY 321045 4 + 26350515 tata i panTro5.chrY C 0 C 0 s gorGor5.CYUI01002012v1 36125 4 + 57002 Tata i gorGor5.CYUI01002012v1 C 0 N 0 s ponAbe2.chrUn 2094169 4 + 72422247 TATA i ponAbe2.chrUn I 3202 C 0 s macFas5.chr10 61754128 4 - 96509753 tgtg i macFas5.chr10 I 14 C 0 s macNem1.NW_012014799v1 606339 4 + 11597128 tgtg i macNem1.NW_012014799v1 I 3 C 0 s cerAty1.NW_012001187v1 169175 4 + 5626091 tgtg i cerAty1.NW_012001187v1 I 14 C 0 s chlSab2.chr14 90916034 4 - 107702431 tata i chlSab2.chr14 I 44 C 0 e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1694.000000 s hg38.chr14_KI270725v1_random 84625 1 + 172810 t s panTro5.chrY 321049 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 92696 1 + 1110922 t i gorGor5.CYUI01015696v1 N 0 C 0 s ponAbe2.chrUn 2094173 1 + 72422247 T i ponAbe2.chrUn C 0 I 6207 s macFas5.chr10 61754132 1 - 96509753 t i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 606343 1 + 11597128 t i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169179 1 + 5626091 t i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916038 1 - 107702431 c i chlSab2.chr14 C 0 C 0 e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=6765.000000 s hg38.chr14_KI270725v1_random 84626 7 + 172810 atatata s panTro5.chrY 321050 7 + 26350515 atatata i panTro5.chrY C 0 I 39 s gorGor5.CYUI01015696v1 92697 7 + 1110922 ttatata i gorGor5.CYUI01015696v1 C 0 C 0 s macFas5.chr10 61754133 7 - 96509753 gtgtgtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 606344 7 + 11597128 gtgtgtg i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169180 7 + 5626091 gtgtgtg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916039 7 - 107702431 atatatg i chlSab2.chr14 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=6180.000000 s hg38.chr14_KI270725v1_random 84633 11 + 172810 tatgggtttat s gorGor5.CYUI01015696v1 92704 11 + 1110922 tatatatatat i gorGor5.CYUI01015696v1 C 0 I 1 s macFas5.chr10 61754140 11 - 96509753 cgcgcgtgtgt i macFas5.chr10 C 0 I 61 s macNem1.NW_012014799v1 606351 11 + 11597128 tgtgtgtgtgt i macNem1.NW_012014799v1 C 0 I 24 s cerAty1.NW_012001187v1 169187 11 + 5626091 tatgtatatat i cerAty1.NW_012001187v1 C 0 I 69 s chlSab2.chr14 90916046 11 - 107702431 tacgtgtgcat i chlSab2.chr14 C 0 I 1 e ponAbe2.chrUn 2094174 6207 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I e panTro5.chrY 321057 39 + 26350515 I a score=3152.000000 s hg38.chr14_KI270725v1_random 84644 4 + 172810 taca s gorGor5.CYUI01015696v1 92716 4 + 1110922 tata i gorGor5.CYUI01015696v1 I 1 C 0 s macFas5.chr10 61754212 4 - 96509753 tata i macFas5.chr10 I 61 C 0 s cerAty1.NW_012001187v1 169267 4 + 5626091 tata i cerAty1.NW_012001187v1 I 69 C 0 s chlSab2.chr14 90916058 4 - 107702431 tata i chlSab2.chr14 I 1 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e macNem1.NW_012014799v1 606362 24 + 11597128 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I e panTro5.chrY 321057 39 + 26350515 I a score=-363.000000 s hg38.chr14_KI270725v1_random 84648 2 + 172810 ta s gorGor5.CYUI01015696v1 92720 2 + 1110922 tg i gorGor5.CYUI01015696v1 C 0 I 2 s macFas5.chr10 61754216 2 - 96509753 ta i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001187v1 169271 2 + 5626091 ta i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916062 2 - 107702431 ta i chlSab2.chr14 C 0 C 0 s rhiBie1.NW_016814605v1 74723 1 + 254590 t- i rhiBie1.NW_016814605v1 N 0 I 54556 e ponAbe2.chrUn 2094174 6207 + 72422247 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e macNem1.NW_012014799v1 606362 24 + 11597128 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I e panTro5.chrY 321057 39 + 26350515 I a score=1365.000000 s hg38.chr14_KI270725v1_random 84650 1 + 172810 t s gorGor5.CYUI01015696v1 92724 1 + 1110922 t i gorGor5.CYUI01015696v1 I 2 C 0 s macFas5.chr10 61754218 1 - 96509753 t i macFas5.chr10 C 0 I 31 s macNem1.NW_012014799v1 606386 1 + 11597128 t i macNem1.NW_012014799v1 I 24 I 55316 s cerAty1.NW_012001187v1 169273 1 + 5626091 t i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 90916064 1 - 107702431 t i chlSab2.chr14 C 0 I 1 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e rheMac8.chr13 34586 1998 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I e panTro5.chrY 321057 39 + 26350515 I a score=7803.000000 s hg38.chr14_KI270725v1_random 84651 6 + 172810 tattac s panTro5.chrY 321096 6 + 26350515 tattac i panTro5.chrY I 39 C 0 s gorGor5.CYUI01015696v1 92725 6 + 1110922 tattac i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 36584 6 - 108979918 tattac i rheMac8.chr13 I 1998 C 0 s macFas5.chr10 61754250 6 - 96509753 tataAC i macFas5.chr10 I 31 C 0 s cerAty1.NW_012001187v1 169275 6 + 5626091 taaaac i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90916066 6 - 107702431 tataac i chlSab2.chr14 I 1 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e manLeu1.NW_012101586v1 216550 143 + 521157 I e macNem1.NW_012014799v1 606387 55316 + 11597128 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=416143.000000 s hg38.chr14_KI270725v1_random 84657 176 + 172810 atattaacttacaggatcacaaggtcccacagtaggctgtctgcaggcatgaggaatgaggagtaaggagagccagctcgagtctcaaaactaaagaacttggagtccgatgttcaagggtaggaagcatccagcacgggagagagatgtaggctgggaggctgggccagactcac s panTro5.chrY 321102 175 + 26350515 atattaacttacagt-tcacaaggtcccacagtagactgtctgcaggcatgaggagtgaggagtaaggagagccagctcgagtctcaaaactaaagaacttggagtccgatgttcaagggtaggaagcatccagcacgggagagagatgtaggctgggaggctgggccagactcac i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 92731 176 + 1110922 atattaacttacaggatcacaaggtcccacagtaggctgtctgcaggcatgaggagtgaggagtaaggagagccagctcgagtctcaaaactaaagaacttggagtccgatgttcaagggtaggaagcatccagcacgggagagagatgtaggctgggaggctgggccagactcac i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 36590 176 - 108979918 atattaacttataggatcacaaggtcccactgtaggctgtctgcaggcatcaggagtgaggagcaaggagatccagctcgagtctcaaaactgaagaacttggaatccagtgtttgaggacaggaagcatccagcaggggagagagatgtaggctgggaggctgggccagactcac i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754256 176 - 96509753 Atattaacttacaggttcacaaggtcccactgtaggctgtctgcaagcatgaggagtgaggagcaaggagagtcagcttgagtttcaaaaccgaagaacttggagtccaatgttcgaggtcaggaagcatccagcacaggagagagatgtaggctgggaggctgggcaagactcac i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001187v1 169281 176 + 5626091 atattaacttacaggttcacaaggtcccactgtaggctgtctgcaagcatgaggagtgaggagcaaggagagtcagcttgagtttcaaaactgaagaacttggagtccaatgttcgaggtcaggaagcatccagcacaggagagagatgtaggctgggaggctgggcaagactcac i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916072 176 - 107702431 atattagcttacaggttcacaaggtcccactgtaggctgtctgcaagcatgaggagtgaggagcaaggagagtcagcttgagtttcaaaactgaagaacttggagtccaatgttcgaggtcaggaagcatccagcacaggagagagatgtaggctaggaagctgggaaagactcac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216693 176 + 521157 atattaacttacaggttcacaaggtcccactgtaggctgtctgcaagcatgaggagggaggagcaaggagagtcagcttgagtttcaaaactgaagaacttggagtccaatgttcgaggtcaggaagcatccagcacaggagagagatgtaggctgggaggctgggcaagacccac i manLeu1.NW_012101586v1 I 143 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e calJac3.chr14 90630381 1 - 108792865 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e macNem1.NW_012014799v1 606387 55316 + 11597128 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=78509.000000 s hg38.chr14_KI270725v1_random 84833 34 + 172810 tttttcact-ttttttctgcctgctt----tatattcac-- s panTro5.chrY 321277 33 + 26350515 cttttcact-ttttt-ctgcctgctt----tatattcac-- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 92907 33 + 1110922 tttttcact-ttttt-ctgcctgctt----tatattcac-- i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 36766 34 - 108979918 tttttcacctttttt-ctgcctgctt----tatattcac-- i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754432 33 - 96509753 tttttcaac-ttttt-ctgcctgctt----catattcac-- i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001187v1 169457 33 + 5626091 tttttcaac-ttttt-ctgcctgctt----catattcac-- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916248 33 - 107702431 tttttcaac-ttttt-ctgcctgctt----catattcac-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216869 33 + 521157 tttttcaac-ttttt-ctgcctgctt----catattcac-- i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90630382 39 - 108792865 tttttcaca-ttttt-ctgccttcttgtagtctagccatgc i calJac3.chr14 I 1 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e macNem1.NW_012014799v1 606387 55316 + 11597128 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=71068.000000 s hg38.chr14_KI270725v1_random 84867 35 + 172810 tggcagctgatgaaatggtgccc--------------atagattaagca s panTro5.chrY 321310 35 + 26350515 tggcagctgattaaatggtgccc--------------atagattacgta i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 92940 34 + 1110922 tggcagctgattaaatggtgccc--------------ata-attaagta i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 36800 35 - 108979918 tggcagctgattagacggtgccc--------------atagattaagtg i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754465 49 - 96509753 tggcagctgattagatgcttcatattcactggcagagatagattaagtg i macFas5.chr10 C 0 I 9 s cerAty1.NW_012001187v1 169490 49 + 5626091 tggcagctgattagatgcttcatattcactggcagagatagattaagtg i cerAty1.NW_012001187v1 C 0 I 8 s chlSab2.chr14 90916281 49 - 107702431 tgacagctgattagatgcttcatattcactggcagagatagattaagtt i chlSab2.chr14 C 0 I 12 s manLeu1.NW_012101586v1 216902 49 + 521157 tggcagctgattagatgcttcatattcactggcagagatagattaagtg i manLeu1.NW_012101586v1 C 0 I 6 s calJac3.chr14 90630421 36 - 108792865 tggcagttgattggattgtgtccac------------ccagatgaagg- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370008 36 - 3814455 tggcagttgattggattgtgtccac------------gcagattaagg- i saiBol1.JH378265 N 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e macNem1.NW_012014799v1 606387 55316 + 11597128 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=911.000000 s hg38.chr14_KI270725v1_random 84902 2 + 172810 gg- s panTro5.chrY 321345 2 + 26350515 gg- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 92974 2 + 1110922 gg- i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 36835 2 - 108979918 gg- i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754523 2 - 96509753 gg- i macFas5.chr10 I 9 C 0 s macNem1.NW_012014799v1 661703 2 + 11597128 gg- i macNem1.NW_012014799v1 I 55316 C 0 s cerAty1.NW_012001187v1 169547 2 + 5626091 gg- i cerAty1.NW_012001187v1 I 8 C 0 s chlSab2.chr14 90916342 2 - 107702431 gg- i chlSab2.chr14 I 12 C 0 s manLeu1.NW_012101586v1 216957 2 + 521157 gg- i manLeu1.NW_012101586v1 I 6 C 0 s calJac3.chr14 90630457 2 - 108792865 -gt i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370044 2 - 3814455 -gt i saiBol1.JH378265 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=824699.000000 s hg38.chr14_KI270725v1_random 84904 167 + 172810 gggtctgccttccccagactactgactcaaatattaatctcctttggcaacaccctcacagactcacccaggagcaatgcttacatccttcaatgtaatcaagttgacaatctgtattaactatcacaGGATTACAGACCTGAGCCATCACACATAGTGTTATTGTA s panTro5.chrY 321347 166 + 26350515 gg-tctgccttccccagattactgactcaaatattaatctcctttggaaacacactcatagacacacccaggaggaaggcttacatccttcaatgtaatcaagttgacaatcagtattaactatcacaGGATTACAGACCTGAGCCATCACACACAGTGTTATTGTA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 92976 167 + 1110922 gggtctgccttccccagactactgactcaaatattaatctcctttggcaacaccctcacagacacacccaggagcaatgcttacatccttcaatgtaatcaagttgacaatcagtattaactatcacaGGATTACAGACCTGAGCCATCACACACAGTGTTATTGTA i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 36837 167 - 108979918 aggtctgccttccccagcctactgactcaaatgttaatctcctttggcagcaccctcacagacacacccaggaggaatgcctacatccttcaatctaatcaagttgacaatcagtattaattatcacaGGATTACAGGCCTGAGCCATCCCACACAGCCTTATTGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754525 167 - 96509753 gggtctgccttccccagcctactgactcaaatatcaatctcctttggcaggaccctcacagacacacccaggagcaatgcttacatccttcaaccaaattaaattgacaatcagtactaactatcacaAGATTACAGACCTGAGCCATCACACATAGCCTTATTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 661705 167 + 11597128 gggtctgccttccccagcctactgactcaaatatcaatctcctttggcaggaccctcacagacacacccaggagcaatgcttacatccttcaaccaaattaaattgacaatcagtattaactatcacaAGATTACAGACCTGAGCCATCACACATAGCCTTATTGCA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169549 167 + 5626091 gggtctgccttccccagcctactgactcaaatatcaatctcctttggcaggaccctcacaggcacacccaggagcaatggttacattcttcaaccaaattaaattgacaatcagtattaactatcaGAGGATTACAGGCCTGAGCCATCATACATAGCCTTATTGCA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916344 167 - 107702431 aggtctgccttccccagcctactgactcaaatatcaatctcctttggcaggaccctcacagacagacccaggagcaatggttacatccttcaaccaaattaaattgacaatcagtattaactatcacaGGATTACAGACCTGAGCCATCACACATAGCCTTATTGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 216959 167 + 521157 gagtctgccttccccagcctactgactcaaatatcaatatcctttggcaggaccctcacaggcacacccaggagcaatggttacatccttcaaccaaattaaattgacaatcagtattaactatcacaAGATTACAGACCTGAGCCATCACACATAGCCTTCTTGCA i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90630459 167 - 108792865 ggatctgccttccccagtccactgactcaaatattcctctcctttagcaacaccctcgcagacacagccaggaacaatacttacatccttcagtcttatcaagttgacactcggtattaactatcacaGAATTACAGGCTCAAACCATCACACCCAAACTCATTGTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370046 167 - 3814455 ggatctgccttccccagcccactgactcaaatattaccctcctttagcaacaccctcgcagacacagcaaggaacagtacttacatccttcagtcttagcaagttgacactcagtattaactatcacaGAATTACAGGCTTGAACCATCACACACAACTTCATTGTA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 444947 167 + 3620821 gggtctgccttccccagcccactgactcaaatattactctcctttagcaacaccctcgcagacacagccaggaacaatacttacatccttcaatcttagcaggttgacactcagtattaattatcacaGAATTACAGGCTTGAACAATCACACACAACCTCATTGTA i cebCap1.NW_016107537v1 N 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e colAng1.NW_012118465v1 143866 59212 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=447553.000000 s hg38.chr14_KI270725v1_random 85071 79 + 172810 TATTTCATACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATAAAGTTTTTCAGCTATGACCCCAAA----CTGTTAAT s panTro5.chrY 321513 79 + 26350515 TATTTCGTACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATAAAGTTTTTCAGCTATGATCCCAAA----CTGGTAAT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93143 79 + 1110922 TATTTCATACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATAAAGTTTTTCAGCTATGACCCCAAA----CTGGTAAT i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37004 79 - 108979918 TATTTCATACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATAAAGTTTTCCAGCTATGACCCCAAA----CTGGTAAT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754692 79 - 96509753 TATTTCATACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATAACATTTTCCAGCTGTGACCTCAAA----CTGGTAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 661872 79 + 11597128 TATTTCATACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATAACATTTTCCAGCTGTGACCTCAAA----CTGGTAAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169716 79 + 5626091 TATTTCATACAATTTCCTGATTTTCCCATTTTATCTGTGACTTGATAACGTTTTCCAGCTATGACCCCAAA----CTGGTAAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916511 79 - 107702431 TATTTCACACAATTTCCTGATTTTCCCATTTTATCTGTGACTTAATCACATTTTCCAGCTATGACCCCAAA----CTGCTAAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217126 79 + 521157 TATTTCATACAATTTTCTGATTTTCCCATTTTATCTGTGACTTGATAACATTTTCCAGCTATGACCCCAAA----CTCATAAT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 203078 83 + 1278784 TATTTCATACAGTTTCCTGGTGTTTCTGTTTCATCTGTGGCTTAATGAAGTTTTCTTGCTATGAATCCAGACTTGCTGGTAAG i colAng1.NW_012118465v1 I 59212 T 50597 s calJac3.chr14 90630626 83 - 108792865 TATTTTATACAATTTCCTAATTTTCCAATTTTATCTGTGACATAATAAAGTTTTCTTGCTGTGACCCCCAACTTGCTTGTAAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370213 83 - 3814455 TATTTCATACAATTTCCTGATTTTCCAATTTTATCTGTGACATAGTAAAGCTTTCTTGCTGTGATCCCAAACTTGCTTGTGAC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445114 83 + 3620821 TATTTCATACAATTTCCTGATTTTCCAATTTTATCTGTGACATAATAAAGTTTCCTTGCTGTGATCCCAAACTTGCTTGTAAC i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=226434.000000 s hg38.chr14_KI270725v1_random 85150 43 + 172810 ACTTG-AAAGCACATTCAAATGTATTTTGCAACAATTCGTAACT s panTro5.chrY 321592 43 + 26350515 ACTTG-AAAGCACATTCAAATGTATTTTGCATCAATTTGTAACT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93222 43 + 1110922 ACTTG-AAAGCACATTCAAATGTATTTTGCAACAATTCGTAACT i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37083 43 - 108979918 TCTTG-AAAGCACATTCAAATGTATTTTGTGACAATTCGTAACT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754771 43 - 96509753 ACTTG-AAAGGACATTCAAATGTATTTTGTGACAATTCGTAACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 661951 43 + 11597128 ACTTG-AAAGGACATTCAAATGTATTTTGTGACAATTCGTAACT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169795 43 + 5626091 ACTTG-AAAGGGCCTTTCAATTTTTTTTTGGGCCATTTGTTACT i cerAty1.NW_012001187v1 C 0 I 53338 s chlSab2.chr14 90916590 43 - 107702431 ACTTG-AAAGGACATTCAAATGTATTTTGCGACAATTCGTAACT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217205 44 + 521157 ACTTGAAAAGGACATTCAAATGTATTTTGCGACAATTCGTAACT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 152564 43 + 1278784 ACTTG-AAAGCACATTCAAGTGTATTCTGGGACAAGCTGTAACT i colAng1.NW_012118465v1 T 50597 C 0 s calJac3.chr14 90630709 42 - 108792865 ACTTG-AAAGCACATTTAAATGTATTCT-GGACAATTTTTAACT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370296 43 - 3814455 ACTTG-AAAGCACATTTAAATGTATTCTGGGACAACTTTTAACT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445197 43 + 3620821 ACTTG-AAAGCACATTTAAATGTATTCTGGGACAATTTTTAACT i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=538243.000000 s hg38.chr14_KI270725v1_random 85193 95 + 172810 GGCAAAATGTTGAGCCTTGTGGAAAGAGTCACCTTACTTCCCCGTCAGCTGTCAATTCCCCATCACTACTATCACTTCTGGGAGCACATTTTCC--------------A s panTro5.chrY 321635 95 + 26350515 AGTGAAATGTTGAGCCTTGTGGAAAGAGTCACCTTACTTCCCCATCAGCTGTCAATTCCCCATCATTACTATCACTTCTGGGAGCACATTTTCC--------------A i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93265 95 + 1110922 GGCAAAATGTTGAGCCTTGTGGAAAGAGTCACCTTACTTCCCCGTCAGCTGTCAATTCCCCATCATTACTATCACTTCTGGGAGCACATTTTCC--------------A i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37126 91 - 108979918 GGCAAAATGTTGAGCCTCGTGGAG----TCACTTCACTTCTCTGTCAGCTGTCAATTCCCCATCATTACTATCACTTctgggagcatgttttcc--------------a i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754814 109 - 96509753 GGCAATATGTTGAGCCTTGTGGAAAGACGCACCTTACTTCCCTGTCAGCTGTCAATTCCCCATCATTACTATCACTTCTGGGAGCACACTTTCCTTTTCTCCCAGAAAA i macFas5.chr10 C 0 I 6 s macNem1.NW_012014799v1 661994 109 + 11597128 GGCAATATGTTGAGCCTTGTGGAAAGACTCACGTTACTTCCCTGTCAGCTGTCAATTCCCCATCATTACTATCACTTCTGGGAGCACACTTTCCTTTTCTCCCAGAAAA i macNem1.NW_012014799v1 C 0 I 7 s cerAty1.NW_012001187v1 223176 91 + 5626091 GCTAAAATGTTGAGCCTTGTGGAG----TCACCTTACTTCCCTGTCAGCTGTCAATTGCCCATCACTACTATCACTTCTGGTAGCATGTTTTCC--------------A i cerAty1.NW_012001187v1 I 53338 T 53313 s chlSab2.chr14 90916633 109 - 107702431 GGCAATATGTTGAGCCTTGTGGAAAGACTCACCTTACGTCCCTGTCAGCTGTCAATTCCCCATCATTACTTTCACTTCTGGGAGCACACTTTCCTTTTCTCCCAGAAAA i chlSab2.chr14 C 0 I 6 s manLeu1.NW_012101586v1 217249 109 + 521157 GGCAATATGTTGAGCCTTGTGGAAAGACTCACCTTACTTCCTTGTCAGCTGTCAATTCCCCATCATTACTATCACTTCTGGGAGCACACTTTCCTTTTCTCCCAGAAAA i manLeu1.NW_012101586v1 C 0 I 6 s colAng1.NW_012118465v1 152607 95 + 1278784 GGCAAAGTTTTGAGCCTTGTGGAAAGAGCAACCTTACTGACCCATCAGCTGTCAATTCCCCATCACTACTATCACTTCTGGGAGCATATTTTCC--------------A i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90630751 95 - 108792865 GGCAAATTTTTGAGACTTATGGAAAGAGTCACCTTACTTGCCTGTCAGCTGTCAATTCCCCATCATTACTATCACTTctggaagcacatttcct--------------a i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370339 95 - 3814455 GGCAAACTTTTGGGACTTATGGAAAGAGTCACCTTACTTGCCTGTCAGCTGTCAATTCCCCATCATTACTATCGCTTCCggaagcacattttcc--------------a i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445240 95 + 3620821 GGCAAACTTTTGAGACTTATGGAAAGAGTCACCTTACTTGCCTGTCAGCTGTCAATTCCCCATCATTACTATCACTTTTggaagcacatttccc--------------a i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=262062.000000 s hg38.chr14_KI270725v1_random 85288 41 + 172810 AAACTCCTTTTCTCTCTATGGTTTCTTTAGAGTTGCTCCAC s panTro5.chrY 321730 41 + 26350515 AAACTCCTTTTCTCTCTATGATTTCTTTAGAGTTGCTCCAT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93360 41 + 1110922 AAACTCCTTTTCTCTCTATGGTTTCTTTAGAGTTGCTCCAT i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37217 41 - 108979918 aaactccttttctctctatggtttctttagagttgctcaac i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754929 41 - 96509753 AAACTCCTTTTCTCTCTATGGTTTCTTTAGAGTTGCTCAAT i macFas5.chr10 I 6 C 0 s macNem1.NW_012014799v1 662110 41 + 11597128 AAACTCCTTTTCTCTCTATGGTTTCTTTAGAGTTGCTCAAT i macNem1.NW_012014799v1 I 7 C 0 s cerAty1.NW_012001187v1 169954 41 + 5626091 AAACTCCTTTTCTCTCTATGGTTTCTTTAGAGTTGCTCAAT i cerAty1.NW_012001187v1 T 53313 C 0 s chlSab2.chr14 90916748 41 - 107702431 GAACTCCTTTTCTCTCTCTGGTTTCTTGAGAGTTGCTCAAT i chlSab2.chr14 I 6 C 0 s manLeu1.NW_012101586v1 217364 41 + 521157 AAACTCCTTTTCTCTCTATGGTTTCTTTAGAGTTGCTCAAT i manLeu1.NW_012101586v1 I 6 C 0 s colAng1.NW_012118465v1 152702 41 + 1278784 AAACCCCTTTTCTCTCTGTGGTTTCTTTAGAGATGCTTAAC i colAng1.NW_012118465v1 C 0 I 12 s calJac3.chr14 90630846 41 - 108792865 aaaccccttttctttctctggtttctttagagtttctcaat i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370434 41 - 3814455 aaaccccttttctcactctggtttctttagagttgctcaat i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445335 41 + 3620821 aaaccccttttctctctctggtttctttagagttgctcaat i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=19206.000000 s hg38.chr14_KI270725v1_random 85329 3 + 172810 GAG s panTro5.chrY 321771 3 + 26350515 GAG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93401 3 + 1110922 GAG i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37258 3 - 108979918 gag i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754970 3 - 96509753 GAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 662151 3 + 11597128 GAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169995 3 + 5626091 GAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916789 3 - 107702431 GAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217405 3 + 521157 GAG i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90630887 3 - 108792865 gag i calJac3.chr14 C 0 I 5 s saiBol1.JH378265 2370475 3 - 3814455 gag i saiBol1.JH378265 C 0 I 5 s cebCap1.NW_016107537v1 445376 3 + 3620821 gag i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e colAng1.NW_012118465v1 152743 12 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=54094.000000 s hg38.chr14_KI270725v1_random 85332 24 + 172810 GTCACAATAAGTTACAACTAATTA s panTro5.chrY 321774 24 + 26350515 GTTACAATAAGTTACAACTAATTA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93404 24 + 1110922 GTTACAATAAGTTACAACTAATTA i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37261 24 - 108979918 ATTGCAATAAGTTACAACTTACTA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754973 24 - 96509753 ATTGCAATAAGTTACAGCTTACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 662154 24 + 11597128 ATTGCAATAAGTTACAGCTTACCA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 169998 24 + 5626091 ATTGCAATAAGTTACAACTTACCA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916792 24 - 107702431 ATTGCAATAAGTTACAACTTACCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217408 24 + 521157 ATTGCAATAAGTTACAACTTACCA i manLeu1.NW_012101586v1 C 0 C 0 s cebCap1.NW_016107537v1 445379 5 + 3620821 --------gggcc----------- i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e saiBol1.JH378265 2370478 5 - 3814455 I e calJac3.chr14 90630890 5 - 108792865 I e colAng1.NW_012118465v1 152743 12 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=11860.000000 s hg38.chr14_KI270725v1_random 85356 4 + 172810 CTGT s panTro5.chrY 321798 4 + 26350515 CTGT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93428 4 + 1110922 CTGT i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37285 4 - 108979918 CTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61754997 4 - 96509753 CTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 662178 4 + 11597128 CTGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 170022 4 + 5626091 CAGT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916816 4 - 107702431 CTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217432 4 + 521157 CAGT i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90630895 4 - 108792865 cttc i calJac3.chr14 I 5 C 0 s saiBol1.JH378265 2370483 4 - 3814455 cttc i saiBol1.JH378265 I 5 C 0 s cebCap1.NW_016107537v1 445384 4 + 3620821 cttc i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e colAng1.NW_012118465v1 152743 12 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=2663083.000000 s hg38.chr14_KI270725v1_random 85360 464 + 172810 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTACACTGACACCTGAAGTAAAGCACATGCTGTTAGGTGTGGACTGGAGAATCACCTGGAGATGTGCTGCAGGCAGCTGAGAGCATCAGCACCCCCAGCTCTGGGCTTCCCAGACAGGACTGAGGATCATCACAC-GGTGTTCAGCACATACCACCAGGGGCAGGTGAACCCTGGCTTCTGAAGTAACACCTGAGAATCCCCTGTGTCTAGTACCTGCTTCATGAATAACACTCCATAGGCTTCAGAAAGACTGTGGTT----TAGACTCTAATTTATTCAACTTGAATAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATAGCTTCTCTTTTGCTGTACAAATTCCGATTATCCCATAACACAGAC--TCCTCAGCTGGACTTATCTCTCTTCTTTATTCAGT-----CAGGACAGTCATTGTCACGTCTTTTCTGCTGGGGATGAGGA s panTro5.chrY 321802 464 + 26350515 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTACACTGACACCTGAAGTAAAACATATGCAGTTAGGTGTGGACTGGAGAATCACCTGGAGATGTGCTGCAGGCAGCTGAGAGCATCAGCACCCCCAGCCCTGGGCTTCCCAGACAGGACTGAGGATCATCACAC-GGTGTTCAGCACATACCACCACGGGCAGGTGCACCCTGGCTTCTGAAGTAGCACCTGAGAATCCCCTGTGTCTAGTACCTGCTTCATGAATAACACTCCATAGGCTTCGGAAAGACTGTGGTT----TAGACTCTAATTTATTCAACTTGAATAATTTCTGCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATATCTTCTCTTTTGCTGTACAAATTCAGATTATCCCATAACACAGAC--TCCTTAGCTGGACTTATCTCTCTTCTTTATTCAGT-----CAGGACAGGCATTGTCACGTCTTTTCTGCTGGGGATGAGGG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93432 463 + 1110922 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTACACTGACACCTGAAGTAAAACACATGCAGTTAGGTGTGGACTGGAGAATCACCTGGAGATGTGCTGCAGGCAGCTGAGAGCATCAGCACCCCCAGCCCTGGGCTTCCCAGACAGGACTGAGGATCATCACAC-GGTGTTCAGCACATACCACCA-GGGCAGGTGCATCCTGGCTTCTGAAGTAGCACCTGAGAATCCCCTGTGTCTAGTACCTGCTTCATGAATAACACTCCATAGGCTTCGGAAAGACTGTGGTT----TAGACTCTAATTTATTCAACTTGAATAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATAGCTTCTCTTTTGCTGTACAAATTCCGATTATCCCATAACACAGAC--TCCTCAGCTGGACTTATCTCTCTTCTTTATTCAGT-----CAGGACAGGCATTGTCATGTCTTTTCTGCTGGGGATGAGGG i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37289 463 - 108979918 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTAAACTGACACCTGAAGTAAAACACATGCAGTTAGGTGTGGACTGGAGAATCACCTGGAGACGTGCTGCAGGCAGCTGAGAGCATCAGCACCCCC-GCCCTGGGCTTCTCAGACAGGTCTGAGGATCGCCACAC-CGTACTCAGCACATACCACCTGGGGCAGGGGCACTCTGGCTTCTGGAGGAGGACCTGAGAATCCCCTGTCTCTAGTACGTTCTTCATGAATAACACACGGTAGGCTTCGGAAAGACTGTGATT----TAGACTCTAATTTATTGAACTTGAACAATTTCTCCTTTAA---------------------------------------------------------------------------------------------ATACTGAGAATAACTTCTCTTTTGCTGTACAAATTCCACTTATCCCACAACACAAAC--ACCTCAAGTGGACTTATCTCTCCTCTTTATTCATT-----CAGGACAGGCATTGTGATGTCTTTTCTCCCAGGGATGAGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61755001 465 - 96509753 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTAAACTGACACCTGAAGTAAAACACATGCAGTTAGGTGTGGACTGGAGAATCACCTGGAGACATGCTGCAGGCAGCTGAGAGCATCAGCACCCCC-GCCCTGGGCTTCTCAAACAGGTCTGAGGGTCATCATAC-GGTACTCAGTACATACCACCAGGGGCAGGGGCACTCCGGCTTCTGGAGGAGGACCTGAGAGTCCCCTGTCTCTAGTACCTGCTTCATGAATAACATACGGTAGGCTTCGGAAAGACTGTGGTT----TAGACTCTAATTTACTGAACTTGAACAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATAGCTTCTCTTTTGCTGTAGAAATTCCAATTGTCCCATAACACAGACTATCCTCAGGTGAACTTATCTCTCTTATTTATTCTGC-----CAAGACAGACATTGTCACGTCTTTTCTGCTGGGGATGAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 662182 465 + 11597128 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTAAACTGACACCTGAAGTAAAACACATGCAGTTAGGTGTGGACTGGAGAATCACCTGGAGACATGCTGCAGGCAGCTGAGAGCATCAGCACCCCA-GCCCTGGGCTTCTCAAACAGGTCTGAGGGTCATCATAC-GGTACTCAGTACATACCACCAGGGGCAGGGGCACTCCGGCTTCTGGAGGAGGACCTGAGAGTCCCCTGTCTCTAGTACCTGCTTCATGAATAACATACGGTAGGCTTCGGAAAGACTGTGGTT----TAGACTCTAATTTACTGAACTTGAACAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATAGCTTCTCTTTTGCTGTAGAAATTCCAATTGTCCCATAACACAGACTATCCTCAGGTGAACTTATCTCTCTTATTTATTCTGC-----CAAGACAGACATTGTCACGTCTTTTCTGCTGGGGATGAGAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 170026 465 + 5626091 CATGAGATTGGGAAGTCAGAATGGTGGATTCATGTAAACTGACACCTGAAGTAAAACACATGCAGTTAGGTGTGAACTGgagaatcacctggagacgtgctgcaggcagctgagagcatcagcaaccct-gccctgggcttccCAAACAGGTCTGAGGGTCATCACAC-GGTACTCAGTACATACCACCAGGGGCAGGGGCACTCCGGCTTCTGGAGGAGGACCTGATAATCCCCTGTCTCTAGTACCTGCTTCATGAATAACATATGGTAGACTTCGGAAAGACAGTGGTT----TAGACTCTAATTTATTGAACTTGAACAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATAGCTTCTCTTTTGCTGTAGAAATTCCAATTGTCCCATAACACAGACTATCCTCAGGTGAACTTATCTCTCTTATTTATTCTGC-----CAAGACAGACATTGTCACGTCTTTTCTGCTGGGGATGAGGG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90916820 465 - 107702431 CATGAGATTGGGAAGTCAGAATGGTGGATTCATGTAGACTGAGACCTGAAGTAAAACACATGCAGTTAGGTGTGGACTGGAGAATCACCTGGAGAGGTGCTGCATGCAGCTGAGAGCATCAGCAACCCC-TGCCTGGGCTTGCCAAACAGGTCTGAGGGTCATCACAC-GGTACTCAGTACATACGACCAGGGGCAGGGGCACTCCGGCTTCTGGAGGAGGACCTGAGAATCCCCTGTCTCTAGTACCTGCTTCATGAATAACATATGGTAGGCTTTGGAAAGACAGTGGTT----TAGACTCTAATTTATTGAACTTGAACAATTTCTTCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAACAACTTCTCTTTTGCTGTAGAAATTCCAATTGTCCCATAACACAGACTATCCTCAGGTGAACTTATCGCTGTTATTTATTCTGC-----CAAGACAGACATTGTCACATCTTTTCTGCTGGGGATGAGAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217436 465 + 521157 CATGAGATTGGGAAGTCAGAATGGTGGATTCATGTAAACTGACATCTGAAGTAAAACACATGCAGTTAGGTGTGAACTGGAGAATCACCTGAAGACGTGATGCAGGCAGCTGAGAGCATCAGCAACCCC-ACCCTGGGCTTCCCAAACAGGTCTGAGGGCCATCACAC-GGTACTCAGCACATACCACCAGGGGCAGGGGCACTCCGGCTTCTGGAGGAGGACCTGAGAATCCCCTGTCTCTAGTACCTGCTTCATGAATAACATATGGTAGACTTCGGAAAGACAGTGGTT----TAGACTCTAATTTATTGAACTTGAACAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACTGAGAATAGCTTCTCTTTTGCTGTAGAAATTCCAATTGTCCCATAACACAGACTATCCTCAGGTGAACTTATCTCTCTTATTTATTCTGC-----CAAGACAGACATTGTCACGTCTTTTCTGCTGGGGATGAGGG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 152755 463 + 1278784 CATGAGATTGGGAAGTCAGAGTGGTGGATTCATGTACACTGACACCTGAACTAAAGCACATAGAGTTATGAGTGGACTGGAGAATCACCTGGAGACATGCCGCAGGTGGCTGAGAGCATCAACACCCCC-ACCCTGGTCTTCCCAGACAGGTCTGAGGATCATGACAT-GGTACTCAGCACATACCACCAGGGGCAGGTGCACTCTGACTTCTGCAGGAGCACCTGAGAATCCCTTGTCTCTAGTGGCTGCTTCATGAATAACACACCATATGCTTCGAAAAGACTGTGGTT----TAGACTCTAATTTAATCAACTTGAAGAATTTCTCCTTGAA---------------------------------------------------------------------------------------------ATACCGAGAATAGCTTCTCTTTTGCTGTATGAATTCCAATTATCCCATAACACAGAC--TCCTCAGGTGAACTTATCTCTCTTCCTTATTCAAT-----CAGGACAGGCATTGTCCCATCTTTTCTGCTGGGGATGAGGG i colAng1.NW_012118465v1 I 12 C 0 s calJac3.chr14 90630899 473 - 108792865 catgagatttggaagtcagaGTAGTGGATTCATGTACATTGACACCTGAAGTAAAACATGTGGAGTTAGGTGTGGATGGAATAATCACCTACAGATGTGCTGCAGGCAGCTGAGAGCATCAGCACCCCCGGCCCTGGGCTTCGCAGACAGGTCTGA-GATCATCACATGGGTACTCAGCACATACCAGCAGAGGCAGCTGCACTCTGGCTTCTGGAGGGGCACCTGAGACTCCCCTGTCTCTAGTACCTGCTTCATGAATAACATACTGCAGGCTTCAAAAAAACTGTCTTTTTTATTGGCTCCAATTTATTCAACTTCAACAATTTCTCCTTGGA---------------------------------------------------------------------------------------------ATACCAAGAGTAGCTACTCTTTTGCTGTATGAATTTCAATTATCTCATTATATAGAC--TCCTCAAGTGAACTTATCTCTCTTTTTCATTGAATTAAGACAAGACAAGCACTGTCACATCTTTTCTGCTGGGGATGAGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2370487 561 - 3814455 catgagatttggaagtcagaGTGGTAGGTTCATGAACACTGACACCTGAAATAAAACACGTGGAGTTAGGTGTGAACGGAAGAATCACCTAGAGAGGTGCTGCAGGCAACTGAGAGCATCAGCACCCCCGGCCCTGTGCTTCGCGGACAGGTCTGAGGATCATCACACTGGTACTCAGCACATACCAACAGAGGCAGCTGCACTCTGGCTTCTGGAGGAGCACCTGAGAATCCC--GTCTCTAGTACCTGCTTCATGAATAACATACCATAGGCTTCAAAAAAACTGTCTTT----TAGACTCCAATTTATTCAATTTCAACAATTTCTCCTCGGAATTTTTTTTTAACAGGCAGAAACttttattttatttttagacagagtcttgctgtgtcacccaggctggagtgcagtggtgcaatctcagctcaTCTCGAGAGTAGCTACTGTTGTGCCGTATGAATTTCAATTATCTCAATATACAGAC--TCCTCAAGTGAACCTCCCTCTCTTTTTTATTGAATCAAGACAAGACAAGCATTGTCACATCTTTTCTGCTGGGGATGAGGG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445388 470 + 3620821 catgagatttggaagtcagaGTGGTGGATTCATGTACACTGACACCTGAAGTAAAACACGTGGAGTTAGGTGTGGATGGAAGAATCACCTAGAGAGGTGCTGCAGACAGCTGAGAGCATCAGCACCCCCGACCCTGGGTTTCGCAAACAGATCTGAGGATCATCACACAGGTACTCGGTACATACCAACAGAGGGAGCTGCACTCTGGCTTCTGGAGGAGCACCTGAGAATCCCCTATCTCTAGTACATGCTTCATGAATAACATACTGTAGGCTTCAAAAAAACTGTCTTT----TAGACTCCAATTTATTCAACTTCAACAATTTCTCCTTGGA---------------------------------------------------------------------------------------------ATACCGAGAGTAGCTACTCTTTTGCTGTATGAATTTCAATTATCTCATTATACAGAC--TTCTCAACTGAATGTATCTCTCTTTTTTATTGAATCAAGACAAGGCAAGCACTGTCACATCTTTTCTGCTGTGGATGAGGG i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=-2553.000000 s hg38.chr14_KI270725v1_random 85824 1 + 172810 T s panTro5.chrY 322266 1 + 26350515 C i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93895 1 + 1110922 C i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37752 1 - 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61755466 1 - 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 662647 1 + 11597128 A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 170491 1 + 5626091 A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90917285 1 - 107702431 A i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217901 1 + 521157 A i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 153218 1 + 1278784 C i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90631372 1 - 108792865 C i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2371048 1 - 3814455 C i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445858 1 + 3620821 C i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE938805v1 4707 1 + 186790 T i tarSyr2.KE938805v1 N 0 I 1008 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1726426.000000 s hg38.chr14_KI270725v1_random 85825 284 + 172810 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCTCCTCTAGGAAAATCTCCCTATGACTTT--CCAAACCTGACTGAGTTTGAGAACTTTTCTCAGCAGACAGAGGCACCAGAAGGAGC-ATTGGGGCAGCCCAGCCTCATGCATCTGCTTCCTTGGG-GTTTATGTTATGACTTGTAACACTGTGGGAGGGGTACTGTCACTCTGTTGACAGTAATAAGTTGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGTAATCTGTCCCAGATCCACTGTCA s panTro5.chrY 322267 284 + 26350515 GAAAGAGGCTTAGGGCTCACAGGAACCTCCCTGGCCTCCCCTAGGAAAATCTCCCAATGAATTT--CCAAACCTGACTGAGTTTGAGAACCTCCCTCAGCAGATAGAGGCACCAGAAGGAGC-ATTGGGGCAGCCCAGCCTCACACATCTGCTTCCTTGGG-ATTTATTTTATGACTTGTAACACTGTGCGAGGGGTACTGTCACTCTGTTGACAGTAGTAAGTTGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGTAATCTGTCCCAGATCCACTGTCA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 93896 284 + 1110922 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCTCCTCTAGGAAAATCTCCCGATGACTTT--CCAAACCTGACTGAGTTTGAGAACTTCCCTCAGCAGATAGAGGCACCAGAAGGAGC-ATTGGGGCAGCCCAGCCTCACACATCTGCTTCCTTGGG-GTTTATGTTATGACTTGTAACACTGTGGGAGGGGTACTGTCACTCTGTTGACAGTAATAAGCTGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGTAATCTGTCCCAGATCCACTGTCA i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 37753 283 - 108979918 AAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCCCCTCTAAGAAAATCTCCCAATAACTTT--CAAAACCTGACTGAGTTTGAGAACTTTCCTCAGCAGATAGAGGCACTAGAAGGAGC-CCTGGGGCAGCCCAGCCTCACACATCTGCTTCCTTGGGGATTTATGTTATGACTTGTAACACTGTGGGAGCGTAACTGTAATCCTGTTGACAGTAATAAGTGGCAAAATCTTCAGGCTGCAGGCTGCTGATTGT--GAGTGTAATCCGTCCCAGATCCACTGCCG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61755467 284 - 96509753 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCCCCTCTAGGAAAATCTCCCAATGACTTT--CAAAACCTGACTGAGTGTGAGAAATGCCCTCAGCAGATAGAGGCACCAGAAGGAGC-CCTGGGGCAGCCCAGCCTCACACATCTGCTTCCTTGGGGGTTTCTGTTATGACTTGT-ACACTGTGGGAGGGTAACTATAACCCTGTTGACAGTAATAAGTGGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGAAATCCGTCCCAGATCCACTGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 662648 285 + 11597128 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCCCCTCTAGGAAAATCTCCCAATGACTTT--CAAAACCTGACTGAGTGTGAGAAATGCCCTCAGCAGATAGAGGCACCAGAAGGAGC-CCTGGGGCAGCCCAGCCTCACACATCTGCTTCCTTGGGGGTTTCTGTTATGACTTGTAACACTGTGGGAGGGTAACTATAACCCTGTTGACAGTAATAAGTGGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGAAATCCGTCCCAGATCCACTGCCG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 170492 285 + 5626091 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCCCCTCTAGGAAAATCTCCCAATGACTTT--CAAAACCTGACTGAGTGTGAGAAATGCCCTCAGCAGACAGAGGCACCAGAAGGAGC-CCTGGGGCAGCCCAGTCTCACACATCTGCTTCCTTGGGGGTTTCTGTTATGACTTGTAACACTGTGGGAGGGTAACTATAACCCTGTTGACAGTAATAAGTGGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGTAATCTGTCCCAGATCCACTGCCG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90917286 285 - 107702431 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCCCCTCTAGGAAAATCTCCCAATGACTTT--CAAAACCTGACTGAGTGTGAGAAATGCCCTCAGCAGATAGAGGCACCAGAAGGAGC-CCTGGGGCAGCCCAGCCTCACATGTCTGCTTCCTTGGGGGTTTCTGTTATGACTTGTAACACTGTGGGAGGGTAACTATAACCCTGTTGACAGTAATAAGTGGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGTAATCCGTCCCAGATCCACTGCCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 217902 285 + 521157 GAAAGAGGCTTAGGGTTCAGAGGAACCTCCCTGGCCCCCTCTAGGAAAATCTCCCAATGACTTT--CAAAACCTGACTGAGTGTGAGAAATGCCCTCAGCAGACAGAGGCACCAGAAGGAGC-CCTGGGGCAGCACAGCCTCACACATCTGCTTCCTTGGGGGTTTCTGTTATGACTTGTAACACTGTGGGAGGGTTACTATAACCCTGTTGACAGTAATAAGTGGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGTAATCCGTCCCAGATCCACTGCCA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 153219 286 + 1278784 AAAATAGGCTTAGGGTTCAGAGGAGCCTCCCTGACCCCCTCTACAAAAGTCTCCCAATGACTTT--CAAAATCTGATTGAATATAACAAATGCTCTTAGCAGATGGAGGCACCAGGAAGAGTATCTGGGGTGGCTCAGCCTCACACATCTGCTTCCTTGGGAGTTTATGTTATGACTTGTAACACTGTGGGAGGGGTACTATAACCATGCTGACAATAATAAATTGCAACATCTTCAGGCTGCAGACTGCTGATGGTGAAAGTGTAATCTGTCCCAGATCCACTGCCA i colAng1.NW_012118465v1 C 0 I 27792 s calJac3.chr14 90631373 282 - 108792865 GGAAGAGGCTTAGGATTTAGAGACGCCTCCATGACCCCCTCTATAATAATCTCCCAATGACTTT--CAAAAC----CTGAGTATGAGAAATGCTCTCAGGAGATAAAGGCACCAGGAGGAGCATCTGGGGCAGCCTTGCCTCACACATCTGCTTCCTTGGGGGTTTATGTTATGACTTGTAACACTGTGGGAGGAGTACTGTAATGCTGTTGACAGTAATAAGTTGCAACATCTTCAGACTGCAGGCTGCTGATGGTGAGAGTGTAGTCTGTCCCAGATCTACTGCCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2371049 286 - 3814455 GGAAGAGGCTTAGGGTTTAGAGAAGCCTCCATGACCCCCTCTATAATAATCTCCCAATGACTTT--CAAAACCTGACTGAGTATGAGAAATACTCTCAGCAGATAGAGGCACCAGGAGGAGCATCTGGGGCAGCCCCGCCTCACAAATCTGCTTCCTTGGGGGTTTATGTTATGACTTGTAACACTGTGGGAGGTTTACCGTAATGCTGTTGACGGCAATAAGTTGCAACATCTTCAGGCTACAGGCTGCTGATGGTGAGAGTGAAATCTGTCCCAGATCCACTGCCA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 445859 287 + 3620821 GGAAGAGGCTTAGGGTTCAAAGAAGCCTCCATGACCCGCTCTGTGATAATCTCCCAATGACTTTCACAAAACCTGACTGAGTATGAGAAATGCTCTCAGCAGATAGA-GCACCAGGAGAAGCATCTGGGGCAGCCCTGCCTCACACATCTGCTTCCTTGGTGGTTTATGTTATGACTTGTAACACTGTGGGAGGAGTACTATAAGCTTGTTGACAGTAATAAGTGGCAAAATCATCAGGCTGCAGGCTGCTGATGGTGAGAGTGTATTCTGTCCCAGATCCACTGCCA i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e tarSyr2.KE938805v1 4708 1008 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=4084690.000000 s hg38.chr14_KI270725v1_random 86109 695 + 172810 CTGAACCGAGAGGGAATCCCACTTTGCAGACTGGATGCAGCATAGATCAGGAGCTTAGGAGTTTTCCCTGGTTTCTGCTGATACCAATTTAAATTATTGCTAATGCCCTGACTCGCCCGGCAAGTGATGGTGACTCTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAAGTTGGAAACATAAAAACAAATATTCTTGCAATTAATCATGTTATCAGAGGACTTCCCTGAAGTTCCAGACAGTACTGAGCACACT-GACCAAGTATAATCCTAGTGTTCTCC-TTCCTTACCTGGCAGCCAGAGCACCAGGAGCCCCAGGAGCTGAGTGGGGGCCCTCACATCTGTGCTGTGTCCTGACTGGGACTGA---CTCCTGCACCGGGTGTGACCAGCCTATAAA-AAGTCTTCAGGGCAGGGGGTTGTGCTTTAGGAACAGGCAAATCAGCAGGGGATGGGGCAGGCTGAGCACAGCTGCGGGGCTGGCTCATTTCAGTAACTCAGCACAGGGGCGCAGTATCCCCAGAGTCCCAGGTCAGACCAGGGCAGCACAGATTTACCTTGAAAGAATACATTTCTCATTGGTGGCCATACGGTTACAGAACATATTTTTGGAGTGAATTTTCAA--------------------------------AATTTTAAATCAACCTAAGCCTAGATTAAATAATATATTT- s panTro5.chrY 322551 695 + 26350515 CTGAACCGAGAGGGAATCCCACTTTGCAGACTGGATGCAGCATAGATCAGGAGCTTAGGAGTTTTCCCTGGTTTCTGCTGATACCAATTTAAATTATTGATAATGCCCTGACTCGCCCGGCAAGTGATGGTGACTCTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAAGTTGGAAACATAAAAACAAATATTCTTGCAATTAATCATGTTATCAGAGGACTTCCCTGAAGTTCCAGACAGTACTGAGCACACT-GACCGAGTATAATCCTAGTGTTCTCC-TTCCTTACCTGGCAGCCAGAGCACCAGGAGCCCCAGGAGCTTAGTGAGGGCCCTCACATCTGTGCTGTGTCCTAACTGGGTCTGA---CTCCTGCACCGTGTGTGACCAGCCTATAAA-AAGTCTTCAGGGCAGGGGGCTGTGCTCTAGGAACAGTCAAGTCAGCAGGGGATGGGGCAGGCTGAGCACAGCTGCAGGGCTGGCTCATCTCTGTAACTCAGCACAGGGGCGCAGTATCCCCAGTGTCCCAGGTCAGACCAGGGCAGCACAGATTTACCTTGAAAGAACACACTTCTCATTGGTGGCCATACCGTTACAGAACATATTTTTGGAGTGAATTTTCAA--------------------------------AATTTTAAATCAACCTCAGACTAGATTAAATAATATATTT- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 94180 691 + 1110922 CTGAACCGAGAGGGAATCCCACTTTGCAGACTGGATGCAGCATAGATCAGGAGCTTAGGAGTTTTCCCTGGTTTCTGCTGATACCAATTTAAATTATTGCTAATGCCCTGACTCGCCCGGCAAGTGATGGTGACTCTG-CTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAAGTTGGAAACATAAAAACAAATATTCTTGCAATTAATCATGTTATCAGAGGACTTCCCTGAAGTTCCAGACAGTACTGAGCACACT-GACCGAGTATAATCCTAGTGTTCTCC-TTCCTTACCTGGCAGCCAGAGCCCCAGGAGCCCCAGGAGCTGAGTGGGGGCCCTCACGTCCGTGCTGTGTCCTGACTGGGGCTGA---CTCCTGCACCGGGTGTGACCAGCCTATAAA-AAGTCTTCAGGGCAGGGGGCTGTGCTCTAGGAACAGGCAAATCAGCAGGGGATGGGGCAGGCTGAGCACAGCTGCAGGGCTGGCTCATCTCAGTAACTCAGCACA-GGGCGCAGTATCCCCAGAGTCCCAGGTCAGACCAGGGCAGCACAGATTTACCTTGAAAG-ATACACTTCTCATTGGTGGCCATACGGTTACAGAACATATTTTTGGAGTGAATTTTCAA--------------------------------AATTTTAAATCAACCTAAGACTAGATTAAATAATA-ATTT- i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 38036 693 - 108979918 CTGAATCGAGAGGGAATCCCACTTTGCAAACTGGATGCAGGATAGATCAGGAGCTTAGGGGCTTTCCCTGGTTTCTGCTGATACCAATTTAAATTATTGCCAATGCCTTGACTCGCCTGGCAAGTGTGGGTGACTCTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAGGTTGGAAACATAAAAACAAATATTCTTACAATTAATCATGTTATCAGAGGACCTCCCTGAAGTTCCAGACAGTACTGAGCACACT-GACTGAGTAAATTCCTGCTGTTCTCC-TTCCTTACCCGGGAGCCACAGCAGCAGGAGCCCCAGGAGCTGAGCGGGGACCCTCATGTCCATGCCGTGTCCTGACTGAGACTGA---CTCCTGCACAGGGTGTGACCAGCCTATAAAAAAGTCTTCAGGGCAGAGGGTTGTGCTCTGGGAACATGCAAATCCACAAGGGATGGGGCAGGCTGAGCACAGCTGCAGGGCTGGCTCATCTCAGTAACTCAGCACAGGG--GCAGTGTCCCCAGAGTCCCAGGTCAGACCAGGGCAGTGCAGATTTGCCTTGAGAGAATACATTTCTCCTTTGGG-CCATACAGTTACAGAACATATTTTTGGAGTGAATTTTCAA--------------------------------AATTTTAAAAGAACATAAGACTAGATTAAATtatatatat- i rheMac8.chr13 C 0 I 342 s macFas5.chr10 61755751 729 - 96509753 CTGAACCGAGAGGGAATCCCACTTTGCAAACTGGATGCCCTATAGATCAGGAGCTTAGGAATTTTCCCTGGTTTCTGCTGATACCAATTTAAATAATTGCTAAGGCTTTGACTCGCCTGGCAAGTAATGGTCACTCTGTCTCCTACAGATGCAGACTGAGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAGGTTGGAAACATAAAAACAAATATTCTTACAGTTAATCATGTTATCAGAGGATTTACCTCAAGAGTCAGACAGTACAGTGCACACT-GAGTGAGTACATTCTTAGTGTTCTCC-TTCCTTACCTGGGAGCCAGAGCAGCAGGAGCCCAAGGAGCTGAGCGGGGACCCTCATGTCCATGCTGTGTCCTGACTGAGACTGACTCCTCCTGCACAGGGTGTGACCAGCCTATAAAAAAGTCTTCGGGGCAGAGGGTTGTGCTCTGGGAACATGCAAATCAGCAGGGGATGGGACAGACTGAGCACAGCTGCAGGGCTGGCTCATCTCAGCAACTCAGCACAGGG--GCAGTGTCCCCAGAGTCCCAGGTCAGACTAGGACAGCGCAGATTTGCCTTGAGAGAATACCTTTCTCCTTGGGGACCATACAGTTACAGAACATATTTTTTGAGTGAATTTTCAAAATTGTAATGAACCTAAGACAAGAACTCATTTAATTTTAAATGAACCTAAGACTAGATTAAATAACATATTT- i macFas5.chr10 C 0 I 1 s macNem1.NW_012014799v1 662933 726 + 11597128 CTGAACCGAGAGGGAATCCCACTTTGCAAACTGGATGCCCTATAGATCAGGAGCTTAGGAATTTTCCCTGGTTTCTGCTGATACCAATTTAAATAATTGCTAAGGCTTTGACTCGCCTGGCAAGTAATGGTCACTCTGTCTCCTACAGATGCAGACTGAGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAGGTTGGAAACATAAAAACAAATATTCTTACAGTTAATCATGTTATCAGAGGATTTACCTCAAGAGTCAGACAGTACAGTGCACACT-GAGTGAGTACATTCTTAGTGTTCTCC-TTCCTTACCTGGGAGCCAGAGCAGCAGGAGCCCAAGGAGCTGAGCGGGGACCCTCATGTCCATGCTGTGTCCTGACTGAGACTGA---CTCCTGCACAGGGTGTGACCAGCCTATAAAAAAGTCTTCGGGGCAGAGGGTTGTGCTCTGGGAACATGCAAATCAGCAGGGGATGGGACAGACTGAGCACAGCTGCAGGGCTGGCTCATCTCAGCAACTCAGCACAGGG--GCAGTGTCCCCAGAGTCCCAGGTCAGACTAGGACAGCGCAGATTTGCCTTGAGAGAATACCTTTCTCCTTGGGGACCATACAGTTACAGAACATATTTTTTGAGTGAATTTTCAAAATTGTAATGAACCTAAGACAAGAACTCATTTAATTTTAAATGAACCTAAGACTAGATTAAATAACATATTT- i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 170777 726 + 5626091 CTGAACCGAGAGGGAATCCCACTTTGCAAACTGGATGCCGTATAGATCAGGAGCTTAGGAATTTTCCCTGGTTTCTGCTGATACCAATTTAAATAATTGCTAAGGCTTTGACTCGCCTGGCAAGTAATGGTCACTGTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGTATGTCACATCTGGCACCTGAGGTTGGAAACATAAAAACAAATATTCTTACAGTTAATCATGTTATCAGAGGATTTACCTGAAAAGTCAGACAGTACTGAGCACACT-GACTGAGTAAATTCCTAGTGTTCTCC-TTCCTTACCTGGGAGCCAGAGCAGCAGGAACCCAAGGAGCTGAGCGGGGACCCTCATGTCCATGCTGTGTCCTGACTGGGACTGA---CTCCTGCACAGGGTGTGACCAGCCTATAAAAAAGTCTTCAGGGCAGAGGGTTGTGCTCTGGGAACATGCAAATCAGCAGGGGATGGGACAGACTGGGCACAGCTGCAGGGCTGGCTCATCTCAGTAACTCAGCACAGGA--ACAGTGTCCCCAGAGTCCCAGGTCAGACTAGGACAGCGCAGATTTGCCTTGAGAGAATACCTTTCTCCTTGGGGACCATACAGTTACAGAACATATTTTTTGAGTGAATTTTCAAAATTGTAATGAACCTAAGACTAGAACTCATTTAATTTTAAATGAACCTAAGACTAGATTAAATAACATATTT- i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 90917571 726 - 107702431 CTGAACCGAGAGGGAATTCCACTTTGCAAACTGGATGCCCTATAGATCAGGAGCTTAGGAATTTTCCCTGGTTTCTGCTGATACCAATTTAAAAAATTGCTAAGGCTCTGACTCCCCTGGCAAGTAATGGTCACTCTGTCTCCTACAGATGCAGACAGAGAAGATGGCGACTGGGTCATCTGGATGTCACATCTGGCACCTGAGGTTGGAAACATAAAAACAAATATTCTTACAGTTAATCATGTTATCAGAGGATTTACCTGAAGAGTCAGACAGTACAGAGCACACT-GAATGAGTACATTCTTAGTGTTCTCC-TTCCTTACCCGGGAGCCAGAGCAGCAGGAGCCCGAGGAGCTGAGCGGGGACCCTCATGTCCATGCCGTGTCCTGACTGAGACTGA---CTCCTGCACAGGGTGTGATCAGCCTATAAAGAATTCTTCAGGGCAGAGGGTTGTGCTCTGGGAACATGCAAATCAGCAGGGGATGGAGCAGGCTGGGCACAGCTGCAGGGCTGGCTCATCTCAGCAACTCAGCACAGGG--GCAGTGTCCCCAGAGTCCCAGGTCAGACCAGGGCAGTGCAGATTTACCTTGAGAGAATACCTTTCTCCTTGGGGACCATACGGTTACAGAACATATTTTTTGAGTTAATTTTCAAAATTTTAATGAACCTAAGACTACAACTCATTTCATTTTAAATGAACCTAAGACTAGATTAAATAACATATTT- i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 218187 726 + 521157 CTGAACCGAGAGGGAATCCCACTTTGCAAACTGGATGCACCATAGATCAGGAGCTTAGGAATTTTCCCTGGTTTCTGCTGATACCAATTTAAATAATTGCTAAGGCTTTGACTCGCCTGGCAAGTAATGGTCACTCTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAGGTTGGAAACATAAAAACAAATATTCTTACAGTTAATCATGTTATCAGAGGATTTACCTGAAGAGTCAGACAGTACAGAGCACACT-GAGTGAGTACATTCTTAGTGTTCTCC-TTCCTTACCTGGGAGCCAGAGCAGCAGGAGCCCAAGGAGCTGAGCGGGGACTCTCATGTCCATGCTGTGTCCTGACTGAGACTGA---CTCCTGCACAGGGTGTGACCAGCCTATAAAAAAGTCTTCGGGGCAGAGGGTTGTGCTCTGGGAACATGCAAATCAGCAGGGGATGGGACAGACTGGGCACAGCTGCAGGGCTGGCTCATCTCAGCAACTCAGCACAGGG--GCAGTGTCCCCAGAGTCCCAGGTCAGACTAGGACAGCGCAGATTTACCTTGAGAGAATACCTTTCTCCTTGGGGACCATACGGTTACAGAACATATTTTTTGAGTTAATTTTCAAAATTGTAATGAACCTAAGACTAGAACTCATTTAATTTTAAATGAACCTAAGACTAGATTAAATAACATATTT- i manLeu1.NW_012101586v1 C 0 I 1 s colAng1.NW_012118465v1 181297 686 + 1278784 CTGAACCGAGAGGGAATTCCACTTTGCAAACTGGATGCCTCATAGATCAGGAGCTTAGGAGATTCCCCCGGTTTCTGCTGATACCAGGCTAAATCATTGGTAATGCCCTGACTCGCCTGGCAAGTGATGGTGACTGTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGCACCTGAGATTGGAAACATAAAAACAAATATTCTTAATATTAATCATGTTATCAGAAGACTTCCCTGAAGTTCCAGACAGTACTGAGCACACC-GACTTGGTAAATTCCTGCTGTTTTCC-TTCCTTACCTGGGAGCCAGAGCAGCAGGAGCCCCAGGAGCTGAGCGGGGACCCTCATGTCCATGCTGTGTCCTGACTGAGATTGA---CTCCTGCACAGGGTATGACCAGCCTATAAA-AAGTCTTAAGTGCTGGGGGCTGTGCTCTGGG-ACATGCAAATCAGCAGGGGATGGGGCAGGCTGGGCACAGCTGCAGGGCTGGCTCATCTCAGTAACTCAACACAGGG--ACAGTGTGCCCAGGGTCCCAA--CAGATCAGG-CAGTGCAGACTTACCTAGAGAGAATACATTTCTCTCATGG--CCATATGCTTACAGAACATA-TTTTGGAGTGAGTTTTCAA--------------------------------AATTGTAAATGAACCTAAGACTAGATTAAATAAAGCATTT- i colAng1.NW_012118465v1 I 27792 I 1 s calJac3.chr14 90631655 684 - 108792865 CTGAACCGAGAGGGAATCCCAGTTTGCAAACTAGATGCAGCATAGATCAGGAGCCTAGGAGTTTTCCCTGGTTTCTGCTGATACCAGGCTAAATAACCTCTAATGTCCTGACTCGCCCGGCAAGTAATGGTGACTCTGTCTCCTACAGATGCAGACAGGGAGGATGGAGACTGCGTCATCTGGATGTCACATCTGGTACCTGAGATTGGAAACATAAAAACAAATATTCATACTATTAATCATGTTATCAGAGGACTTCCCTGTAGTTCCAG-CAGTACTGAGCACACTGGGCTGAGTAAATTCCTAGTGTTCTCCTTTCCTTACCTGGGAGCCAGAGCAGCAGGAGCCCCAGGAGTTGAGCAGGGACCCTCATGTCCATACTGTGTCCTGCGTGAGACTGA---CTACTGCACGGGGTGTGACCAGCCTATAAAACAGTCTTCAGGGCAGGGGTCTGTGCTCTGGG-ACATGCAAATCAGCAGGGGATGGGGCAGGCTGGGCACAGCTGCAGGGCTGGCTCATCTCAGTAACTCAGCAT-GGG--GCAGTGTCCCCTG-------GGTCAGACCA-GGAAGCTCAGATTTACCTTGAGAAAATACATTGTTCTTTGA-GGCCACATGGTTACAGAACACA-TTTTGGGGTGAATTTTCAA--------------------------------AATCTTAAGGGAACCTAAGACTAGAGTAAATAATGTATTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2371335 674 - 3814455 CTGAACCAAGAGGGAATCCCAGTTTGCAAACTACATGCAGCATAGATCAGGACCCCAGGAGCTTTCCCTGGTTTCTGCTGATACCAGGCTAAATAACTGCCAATGCCCTGACTCGCCTGACAAGTAATGGTGACTCTGTCTCCTACAGATGCAGACAAAAAGGATGGAGACTGGGTCATCTGGATGTCACATCTGGTACCTGAGATTGGAAACATAAAAACAAATATTCATACTATGAATCATGTTATCAGAGGACTTCCCTGTAGTTCCAG-CAGGACTGAGCACACT-GGCTGAGTAAATTCCCAGTGTTCTCC-CTCCTTACCTGGGAGCCAGAGCAGCAGGAGCCCCAGGAGCTGAGCGGGGACCCTCATGTCCATACTATGTCCTGACTGGGACTGA---CTCCTGCACGGGGTGTGACCAGCCTATTAATAAGTGTGCAGAGCAAGGGGTTGCATTCTGGG-ACATGCAAATCAGCAGGGTATGGGGCAGGCTGGGCACAGCTGCAGGGCTGGCTCATCTCAGTAACTCAGCACAGGG--GCAGTGTCCCCAGGGTCCCAGGTCAGACCA-GGCAGCTCAGATTTACCTTGAGAAAATACATTGTTCTTTGG-GGTCACACGGTTACAGAACATA-TTTTGTTGTGAATTTTCAA--------------------------------AAT-TTATGGGAACC---------------TAGTGTATTTT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 446146 694 + 3620821 CTGAACCGAGAGGGAATCCCAGTTTGCAAACTAGATGCAGCATAGATCAGGAGCCTAGGAGTTTTCCCTGGTTTCTGCTGATACCAGGCTAAACAACTGCTAATGCCCTGACTCGCCCGGCAAGTGATGGTGACTCTGTCTCCTACAGATGCAGACAGAAAGGATGGAGACTGGGTCATCTGGATATCACATCTGGTACCTGAGATTGGAAACATAAAAACAAATATTCATACTATTAATCATGTTATCAGAGGACTTCCCTGTAGTTCCAG-CAGTACTGAGCACACTGGGCTGAGTGAATTTCTAGTATCCTCC-TTTCTTACCTGGGAGCCAGAGCAGCAGGAGCCCCAGGAGCTGAGCGGGGACCCTCATGTCCATGCTGTGTCCTGACTGGGACTGA---CTCCTGCACAGGGTGTGACCAGCCTATTAAGAAGTCTTCAGGGCAGGGGGCTGTGTTCTAGG-ACATGCAAATCAGCAGGGGATGGGGCGGGCTGGGCACAGCTGCAGGGCTGGCCTATCTCAGTAACTCAGCACAGGG--GCAGTGTCCCCTGGGTCCCAGGTCAGATCAGGGCAGCACAGACTTACCTTGAGAAAATATACTTTTCTTTGGTGGCCATATGGATACAGAACATATTTTTGGAGTGAAAGTTCAA--------------------------------AATTTTAAATTAACCTAAGGCTAGATTAAATAATGTATTTT i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e tarSyr2.KE938805v1 4708 1008 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=446705.000000 s hg38.chr14_KI270725v1_random 86804 71 + 172810 ATACTTGTATTAGGAGTGTATAGGGAAGCATCACTTTTGGCAGAAAATTTACAATAAAGTTGTAGAATGTG s panTro5.chrY 323246 71 + 26350515 ATACTTGTATTAGGAGTGTATAGGAAAGCATCATTTTCGGCAGAAAATTTACAATAAAGTTGTAGAATGTG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 94871 71 + 1110922 ATACTTGTATTAGGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTTACAATAAAGTTATAGAATGTG i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 39071 71 - 108979918 ATATTTGTATTAGGAGTGTATAGGAAAGCGTTACTTTTGGCAGAAAATTCATAATAAAGTTGTAGAACGTG i rheMac8.chr13 I 342 C 0 s macFas5.chr10 61756481 71 - 96509753 ACACTTGTGTTAGGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGTTGTAGAACGTG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014799v1 663660 71 + 11597128 ACACTTGTGTTAGGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGTTGTAGAACGTG i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 171504 71 + 5626091 ACACTTGTGTTAGGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGTTGTAGAACGTG i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90918298 71 - 107702431 ACACTTGTGTTAGGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGTTGTAGAACGTG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 218914 71 + 521157 ACACTTGTGTTAGGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGTTGTAGAACGTG i manLeu1.NW_012101586v1 I 1 C 0 s colAng1.NW_012118465v1 181984 71 + 1278784 ATCGTTGTATTAAGAGTGTATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGCTGTAGAATATG i colAng1.NW_012118465v1 I 1 C 0 s calJac3.chr14 90632339 70 - 108792865 ATACTTGTATTAGGAGTGTATAGGGAAGCACCA-TTTTGGCAGAAAATTCATAATAAAGTTGTAGAATGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2372009 70 - 3814455 ATACTTGTATTAGGAGTATATAGGGAAGCATCA-TTTTGGCGGAAAATTCATAATAAAGTTGTAGAATGTG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 446840 67 + 3620821 ATACTTGTATTAGG----TATAGGAAAGCATCATTTTTGGCAGAAAATTCATAATAAAGTTGTAGAATGTG i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e tarSyr2.KE938805v1 4708 1008 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=8840.000000 s hg38.chr14_KI270725v1_random 86875 2 + 172810 --GG s panTro5.chrY 323317 2 + 26350515 --GG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 94942 2 + 1110922 --GG i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 39142 2 - 108979918 --GG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61756552 2 - 96509753 --GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 663731 2 + 11597128 --GG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 171575 2 + 5626091 --GG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90918369 2 - 107702431 --GG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 218985 2 + 521157 --GG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 182055 2 + 1278784 --GG i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90632409 2 - 108792865 --GG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2372079 2 - 3814455 --GG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 446907 2 + 3620821 --GG i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE938805v1 5716 2 + 186790 TT-- i tarSyr2.KE938805v1 I 1008 I 1162 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=349856.000000 s hg38.chr14_KI270725v1_random 86877 74 + 172810 GCTGTCAGAAATTTCAGTTAGCCTCAAAG----------------------------------------------------------GAATTTGAAGAGTGTAAAAGTATTTAGTGCTATAATAACAATG--TC s panTro5.chrY 323319 74 + 26350515 GCTATCAGAAATTTCAGTTAGTCTCAAAG----------------------------------------------------------GAATTTGATGAGTGTAAAAGTATTTAGTGCTATAATAACAATG--TC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 94944 74 + 1110922 GCTGTCAGAAATTTCAGTTAGTCTCAAAG----------------------------------------------------------GAATTTGATGAGTGTAAAAGTATTTAGTGCTATAATAACAATG--TC i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 39144 74 - 108979918 GCTGTCAGAACTTTCAGTTACTCTCAAAG----------------------------------------------------------GAATGTGATGAGTGTGAAAGTATTTAGTGCGATACTAACAATG--TC i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61756554 74 - 96509753 GCTGTCAGTACTTTCAGTTACTCTCGAAG----------------------------------------------------------GAATATGATGAGTGTGAAAGTATTTAGTGTGATACTAACAATG--TC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 663733 74 + 11597128 GCTGTCAGTACTTTCAGTTACTCTCGAAG----------------------------------------------------------GAATATGATGAGTGTGAAAGTATTTAGTGTGATACTAACAATG--TC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 171577 74 + 5626091 GCTGTCAGTACTTTCAGTTACTCTCGAAG----------------------------------------------------------GAATGTGATGAGTGTGAAAGTATCTACTGTGATACTAACAATG--TC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90918371 74 - 107702431 GCTGTCAGAACTTTCAGTTACTCTCGAAG----------------------------------------------------------GAATGTGATGAGTGTGAAAGTATTTAGTGCGATACTAACAATG--TC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 218987 74 + 521157 GCTGTCAGAACTTTCAGTTACTCTCGAAG----------------------------------------------------------GAACGTGATGAGTGTGACAGTATTTAGTGCGATACTAACAATG--TC i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 182057 74 + 1278784 GATGTCAGAACTTTCAGTTACTTTCAAAG----------------------------------------------------------AAATTTGATGAGTGTAAAAGTATTTAGTGCTATACTAACAATG--CC i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90632411 126 - 108792865 GCTGTCATAAATTTCGGTTTCTCTCTAAGGAATTTGATGACTCTAAAAGTGTTT----AGTGCTGTATAGCAATGTCTCTCTCAAATGAATTTGATGAGTGCAAAAGTATTTAGTGCTATACTAACAATG---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2372081 128 - 3814455 GCTGTCATTAATTTCAGTTTCTCTCTAAGGAATTTGATGACTCGAAAAG----TGTTTAGTGCTGTATAACAATATCTCTCTCAAATGAATTTGATGAGTGCAAAAGTATTTAGTGCTATACTAACAATGTC-- i saiBol1.JH378265 C 0 I 309 s cebCap1.NW_016107537v1 446909 122 + 3620821 GCTGTCATAAATTTCAGTTTCTCTCTAAGGAATCTGATGACTCTG--------TGTTTACTGCTGTATAACAACGTCTCTCTCAAATGAATTTGATGAGTGCAAAAGTATTTAGTGCTATACTAACAATG---- i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e tarSyr2.KE938805v1 5718 1162 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1847720.000000 s hg38.chr14_KI270725v1_random 86951 346 + 172810 TCTGTCAGTGTGAAATTTCTTCTTTTTTGAAATGAATA--T-AAAAAGAATTTATCAGAAGAATCTTTAATAAATTCAATAGAATTTACTAACAAACTTAAGACATTGTTCCTAGGAGTAAAAGGAAAAACAATTCTCTGAAGATGCACAAAGATGATAACTGTGTCACGCATAGATCTGCCATTATCCAGAGCTATGGGTCTCTTTAAGACCCAGGGGCTAAATGGGCTGCACCTTATTCTTGGTGTGATGATCCCCATATTCTATCCCCTTTCCTGCCTTT-GGTATAATTTCTTATGGTTCTCCAGCATGGAGAGCTGACTAGTAATACCAGGTCTCATTATTTCAA s panTro5.chrY 323393 346 + 26350515 TCCGACAGTGTGAAATTGCTTCTTTTATGAAATGAATA--T-AAAAAGAATTTATCAGAAGCATCTTTAATAAATTCAATAGAATTTACTAACAAACTTAAGACATTGTTCCTAGGAGTAAAAGGAAAAACAATTCTCTGAAGATGCACAAAGATGATAACTGTGTCACGCATAGATCTGCCATTATCCAGAGCTATGGGTCTCTTTAAGACTCAGGGGCTAAATGGGCTGCACCTTATTCTTGGCGTGATGATCCCCATATTCTATCCCCTTTCCTGCCTTT-GGTATAATTTCTTATGGTTCTCCAGCATGGAGAGCTGACTGGTAATACAAGGTCTCATTATTTCAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 95018 344 + 1110922 TCTGTCAGTGTGAAATTGCTTCTTTTTTGAAATGAATA--T-AAAAAGAATTTATCAGAAGCATCTTTAATAAATTCAATAGAATTTACTAACAAACTTAAGACATTGTTCCTAGGAGTAAAAGGAAAAACAATTCTCTGAAGATGCACAAAGATGATAACTGTGTCACGCATAGATCTGCCATTATCCAGAGCTATGGGTCTCTTTAAGACCCAGGGGCTAAATGGGCTGCACCTTATTCTTGGCGTGATGATCCCCATATTCTATCCCCTTTCCTGCCTTT-GGTATAATTTCTTATGGTTCTCCAGCATGGAGAGCTGACTAGTAATACCAGGTCTCATTATTTC-- i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 39218 346 - 108979918 TCTGTCAGTGTGACGTTGCTTCTTTTTTGACATGAATA--T-AAAAAGAATTTATCAGAAGCATCTTTAATAAATTCAATAGAATTTACTAATAAACTTAAGACATTGTTCTTAGCAGTACAAGGAAAAACAATTCGCTGAAGATGCACAAAGATGATAAGTGTGTCATGCATAGATCTGCCGTTATCCACGGCTATGGGTCTCTTTAAGGCCCAGGGGCTAAATGGGTCGCACCTTATTCTTGGCGTGACGATCCCCATATTCTATCCCCTTTCCTGACTTT-GGTATAATTTCTTATGGCTCTGTAGCATGGAGAGCTGACTAGTAATACCAGATCTGATTATTTCAA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61756628 345 - 96509753 TCTGTCAGTGTGACGTTGCTTCATTTTTGAAATGAACA--T-AAAAAGAACTTTTCAGAAGCATCTTCAATAAATTCAATAGAATTTACTAATAAATTTAAGACATTGTTCTTAGCAGTACAAGGAAAAACAATTCACTAACGACGCACAAAGATGATAACTGTGTCACGCATAGATCTGCCGTTACCCAGAGTTATGGGTCTCTTTGAAG-CCAGGGACAAAATGGGCTGCACCTTATTCTTGGCGTGACGATCCCCATATTCTATCCCCTTTCCTGACTTT-GGTATAATTTCTTGTGGTTCTCCAGCATGGAGAGCTGACTAGTGATACCAGGTCTGATTATTTCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 663807 345 + 11597128 TCTGTCAGTGTGACGTTGCTTCATTTTTGAAATGAACA--T-AAAAAGAATTTATCAGAAGCATCTTCAATAAATTCAATAGAATTTACTAATAAATTTAAGACATTGTTCTTAGCAGTACAAGGAAAAACAATTCACTAACGACGCACAAAGATGATAACTGTGTCACGCATAGATCTGCCGTTACCCAGAGTTATGGGTCTCTTTGAAG-CCAGGGACAAAATGGGCTGCACCTTATTCTTGGCGTGACGATCCCCATATTCTATCCCCTTTCCTGACTTT-GGTATAATTTCTTGTGGTTCTCCAGCATGGAGAGCTGACTAGTGATACCAGGTCTGATTATTTCAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 171651 346 + 5626091 TCTGTCAGTGTGACATTGCTTCTTTTTTGAAATGAATA--T-AAAAAGAATTTATCAGAAGCATCTTCAATAAATTCAATAGAATTTACTAATAAATTTAAGACATTGTTCTTAGCAGTACAAGGAAAAACAATTCGCTGAAGATGCACAAAGATGATAACTGTGTCATGCGTAGATCTGCCATTAGCCAGAGTGATGGGTCTCTTTAAAGCCCAGGGACAAAATGGGTTGCACCTTATTCTTGGCGTGACGATCCCCATATTGCATTCCCTTTCCTGACTTT-GGTATAATTTCTTGTGGTTCTCCAGCATGGAGAGCTGACTGGTGATACCAGGTCTGATTATTTCAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90918445 345 - 107702431 TCTGTCAGTGTGACATTGCTTCTTTTTTGAAATGAATG--T-AAAAAGAACTTATCAGAAGCATCTTCAATAAATGCAATAGAATTTACTAATAAACTTAAGACATTGTTCTTAGCAGTTCAAGGAAAAACAATTCACTAACGACGCACAAAGATGATAAGTGTGTCACGCATAGATCTTCCATTAGCCAGAGTTATGGGTCTCTTTGAAG-CCAGGGACAAAATAGGCTGCACCTTATTCTTGGCGTGACGATCCCCATATTCTATCCCCTTTCCTGACTTT-GGTATAATTTCTTGTGGTTCTCCAGCATGGAGAGCTGACTAGTAATACCAGGTCTGATTATTTCAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 219061 346 + 521157 TCTGTCAGTGTGACATTGCTTCTTTTTTGAAATGAATA--T-AAAAAGAACTTATCAGAAGCATCTTCAATAAATTCAATAGAATTTACTAATAAACTTAAGACATTGTTCTTAGCAGTACAAGGAAAAACAATTCGCTGAAGATGCACAAAGATGATAACTGTGTCATGCGTAGATCTGCCGTTAGCCAGAGTGATGGGTCTCTTTAAAGCCCAGGGACAAAATGGGCTGCACCTTATTCTTGGCATGACGATCCCCATATTGCATTCCCTTTCCTGACTTT-GGTATAATTTCTTGTGGTTCTCCAGCATGGAGAGCTGACTGGTGATACCAGGTCTGATTATTTCAA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 182131 345 + 1278784 TCTGTCAGTGTGAAATTGCTTCTTTTTTGAAGTGAAAA--TAAAAAAGTCTTTTTCAGAAGTGTGTTTAATAAATTCAATAGAATTTACTAATAAACTTAAGCCATTGTTCTTAGCAGTATAAGAAAAAGCAATTTGCTGTAGATGCACAAAGGTGATACCTGTGCCATGCATAGATGTGCCATTCTCCAGAGCTATGGGTCTCTTTAATGCCCAGGTGCTAAA-GGGCTGCATATTATTCCAGGCATGAGGATACCCATATTCCATCCCCTTTCCTGCCTTT-GGTATAATTTCTTAAGTTTCTCCAGCATGGAGC-CTGACTAGTGATGCCAGGTCTGATTATCTCAA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90632537 339 - 108792865 TCTGTCAGTGTTAAAATATTTGTTTATT-AAATGAAAA--T----AAGACTTCATCCGAAGTATGTTTAATAAATTCAATAGAATTTGCTAATAAACTTTGGCCACTGTTCTTAGCATTATAAGAAAAACCAATTAGCAGAAGATGCACAAAGATGATACTTAAGCCACACATAATTCTGCTGTTATCCAGAGCTA-AGGTCTCTTTAAA--CCCAGGGCTAAACGGGTTGCATCTGATTCTTGGCATAAGGATCCTTATATTCTATCCTTTCTCCTGCATTTGGGTATGTTTTCTTATGG-TCACCAGCATGGACGGCTGACTAGTAATGCCAAGTCTGATTATTTCAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2372518 340 - 3814455 TCTGTCAGTGTTAAAATGTTTGTTTATT-AAATGAAAATTT----AAGACTTCATCAGAAGTGTGTTTAATAAATTCAATAGAATTTGCTAATAAACTTTAGCCACTGTTCTTAACAGTATAAGAAACCGTGATTAGCTGAAGATGCAC--AGATGATACTTAAGCCACCCATAATTCTGCCATTATCCAGAGCTATGGGTCTCTTTAAA--CCCAGGGCTAAATGTTTTGCATCTGATTCTTGGCATAAGGATCCTTATATTCTATCATTTTTCCTGCATTTGGGTATGTTTTCTTATGG-TCACCAGCATGGAGGGCTGACTAGTGATGCCAAGTCTGATTATTTCAA i saiBol1.JH378265 I 309 C 0 s cebCap1.NW_016107537v1 447031 340 + 3620821 TCTGTCAGTGTTAAAATGTTTGTTTATT-AAATGGAAA--T----AAGGCTTCATCAGAAGTGCGTTTAATAAATTCAATAGAATTTGCTAAAAAACTTTAGCCACTGTCCTTAACACTATAAGAAAAAGCGGTTAGCTGAAGATGCACAAAGATGATACTTACGCCACCCATAATTCTGCCGTTATCCAGAGCTATGGGTCTCTTTAAA--CCCAGGGCTAAATGGGTTGCATCTGATTCTTGGCATAAGGATCCTTATATTCTATCCTTTTTCCTGCATTTGGGTATGTTTTCTTATGG-TCACCAGCATGGAGGGCTGACTAGTAATGCCAAGTCTGATTATTTCAA i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e tarSyr2.KE938805v1 5718 1162 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=7453.000000 s hg38.chr14_KI270725v1_random 87297 2 + 172810 CT s panTro5.chrY 323739 2 + 26350515 CT i panTro5.chrY C 0 C 0 s rheMac8.chr13 39564 2 - 108979918 CT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61756973 2 - 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 664152 2 + 11597128 CT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 171997 2 + 5626091 CC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90918790 2 - 107702431 CT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 219407 2 + 521157 CC i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 182476 2 + 1278784 TT i colAng1.NW_012118465v1 C 0 C 0 s rhiRox1.KN299071v1 180138 2 - 199907 CT i rhiRox1.KN299071v1 N 0 I 1978 s calJac3.chr14 90632876 2 - 108792865 TT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2372858 2 - 3814455 TT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 447371 2 + 3620821 TT i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e gorGor5.CYUI01015696v1 95362 0 + 1110922 C e tarSyr2.KE938805v1 5718 1162 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1624954.000000 s hg38.chr14_KI270725v1_random 87299 272 + 172810 AAAATCTCTGTTTCACTCGCTGACTATAGGAGCCTGGATTAAAATCAACTTGAAGCCCTCTATCAATCTA----------GGCTCAAATAGTCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTCTGAGCTGCGCTCCCCACCAGCCTGTTCTTGGGGTCTCAGGAGCATTTGCCCTAGAGTCTGGCTTTCTGGAGAGCAGGTGAGG----------GGGGAAAAGCCAGGTCAGTGAA-CCTCTCTCCTTAGCGAGGGCAGTTGCTGCCCAATGC s panTro5.chrY 323741 272 + 26350515 AAAATCTCTGTTTCACTCGCTGACTATAGGAGCCTGGATTAAAATCAACTTGAAGCCCTCTATCATTCTA----------GGCTCAAATAGTCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTGTGAGCTGCACTCCCCACCAGCCTGTTCTTGGGGTCTCAGGATAATCTGCCCTAGATTCTGGCTTTCTGGAGAGCAGGTGAGT----------GGGGAAAAGCCAGGTCAGTGAA-CCTCTCTCCTTAGCGAGGGCAGCTGCTGCCCAATGC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 95362 271 + 1110922 AAAATCTCTGTTTCACTCGCGGACTATAGGAGCCTGGATTAAAATCAACTTGAAGCCCTCTATCAATCTA----------GGCTCAAATAGTCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTCTGAGCTGCGCTCCCCACCAGCCTGTTCCTGGGGTCTCAGGAGCATCTGCCCTAGAGTCTGGCTTTCTGGAGAGCAGGTGAGG----------GGGGAAAAGCCAGGTCAGTGAA-CCTCTCTCCTTAGCGA-GGCAGCTGCTGCCCAATGC i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 39566 281 - 108979918 AAAATCTCTGTTTCACTCACT-ACTACAGGAGCCTGGATTAGGATCAACTTGAAGCCTTCTCTGAATCTT----------GGCTCAAATAATCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTCTGAGCTGCGCTCCCCACCAGCCTGTTCCTGGGGTCTCGGGAGCATCTGCCCAAAAACCTGGCTTTCTGGAGAGCAGGTGAGGGGGAGGCCCTGGGGAAAGGCCAGGTCAGTGAA-CCTCTCTCCTTAGTGAGGGTGGCTGCTGCCCAACGC i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61756975 282 - 96509753 AAAATCTCTGTTTCACTCGCTGACTATAGGAGCCTGCATTAGGATCAACTTGAAGCCTTCTCTGAATCTT----------GGCTCAAATAATCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTCTGAGCTGCGCTCCCCACCAGCCTGTTCCTGGGGTCTCAGGAGCATCTGCCCAAGAACCTGGCTTTCTGGAGAGCAGGTGAGGGGGAGGCCCTGGGGAAAGGCCAGGTCAGTGAA-CCTCTCTCCTTAGTGAGGGTGGCTGCTGCCCAACGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 664154 282 + 11597128 AAAATCTCTGTTTCACTCGCTGACTATAGGAGCCTGCATTAGGATCAACTTGAAGCCTTCTCTGAATCTT----------GGCTCAAATAATCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTCTGAGCTGCGCTCCCCACCAGCCTGTTCCTGGGGTCTCAGGAGCATCTGCCCAAGAACCTGGCTTTCTGGAGAGCAGGTGAGGGGGAGGCCCTGGGGAAAGGCCAGGTCAGTGAA-CCTCTCTCCTTAGTGAGGGTGGCTGCTGCCCAACGC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 171999 281 + 5626091 AAAATCTCTGTTTCACTTGCTGACTATAGGAGCCTGGATTAGGATCAACTTGAAGCCCTCTCTGGATCTT----------GGCTCAGAAAATCAATTGTTTCAAAGTAGGATGACAAAGGCTACATCCCCTGAGTAATACTCTGAGCTG-ACTCCCCACCAGCCTGTTCCTGGGGTCTCAGGAGCATCTGCCCAAGAACCTGGCTTTCTGGAGAGCAGGTGAGGGGAAGGCCCTGGGGAAAAGCCAGGTGAGTGAA-CCTCTCTCCTTAGTGAGGGTGGCTGCTGCCCAATGC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90918792 282 - 107702431 AAAATCTCTGTTTCACTCGCTGACTATAGGAGCCTGCATTAGGATCAACTTGAAGCCCTCTCTGAATCTT----------GGGTCAAATAATCAATTGTTTCCAAGTAGGATGACAAAGGGCACATCCCCTGAGTAATGCTCTGAGCTGTGCTCCCCATCAGCCTGTTCCTGGGGTCTCAGGAGCATCTGCCCAAGAACCTGGCTTTCTGGAGAGCAGGTGAGGGGGAGGGCCTGGGGAAAGGGCAGGTCAGTGAA-CCTCTCTCCTTAGTGAGGGTGGCTGCTGCCCAACGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 219409 282 + 521157 AAAATCTCTGTTTCACTTGCTGACTATAGGAGCCTGGATTAGTATCAACTTGAAGCCCTCTCTGAATCTT----------GGCTCAAATAATCAATTGTTTCAAAGTAGGATGACAAAGGCCACATCCCCTGAGTAATGCTCTGAGCTGCGCTCCCCACCAGCCTGTTTCTGGGGTCTCGGGAGCATCTGCCCAAGAACCTGGCTTTCTGGAGAGCAGGTGAGGGGGAAGCCCTGGGGAAAGGCCAGGTCAGTGAA-CCTCTCTCCTTAGTGAGGGTGGCTGCTGCCCAACGC i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 182478 292 + 1278784 AAAATCTCTGTTTCACTCACTGA-TATAGGAGCCTGGATTAGGATCAACTTGAAGCCCTCTATCAACCTCTATCAACCTAGGCTCAAATGATCAATTGTTTCAAAGCAGGATGAGAAAAGCTACAGCTCCTGGGTAATGCTCTGAGCTGTGCTCCCCACCAGCCTTTTCCTGGGGTCTCAGGTGCATCTGCCCTAGAGCTTGGGTTCCTGGAAGGTAGGTGAGGGGGAGGCCTTGGGGAAAGTCCAGGTCAGTGAACCCTCTCTCCTTAGTGAGGGCGGCTGCTGCTCAGTGC i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90632878 273 - 108792865 AAAATCTCTGTTCTGCTCACTAACTTTAGGAGGCTGGATTAGGAACCACTTGAAGCCCTCAATCAATCTA----------GGCTCAAATAATCAATTGTTTCAAAGCAGGATGAGAAAGACCACATTTTCTGGGTAATGCTCTGAGCTCCACTCCCCACCATTCTGTTTCTGGGGTCTCAGGTGCATCAGCCCTATAGCCTGGCTTTCTGGAGAGCAGGTGAAGGGGAGGCCATGGGGAAAGGT----------AACCCTCTCTCCTTAGCAAGGGCAGCTACTGCTCAGTGC i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2372860 279 - 3814455 AAAATCTCTGTTCTACTCACTAACTTTAGGAGGCTGGATTAGGAACCACTTGAAGCCCTCAATCAATCTA----------GGCTCAAAGAATC----GTTTCAAAGCAGGATGAGAAAGGCCACATTTTCTGGGTAATGCTCTGAGCTCCACTCCCCACCACTCTGTTTCTGGGGTCTCAGATGCATCAGCCCTATAGTCTGGCTTTCTGGAGAGCAGGTGAGGGGGAGGCCATGGGGAAAGGTTGGGTCAGTGAACCCTCTCTCCTTAGTGAGGGCGGCTGCTGCTCAGTGC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 447373 283 + 3620821 AAAATCTCTATTCTACTCACTAACTTTAGGAGGCTGGATTAGGAACCACTTGAAGCCCTCAATCAATCTA----------GGCTCAAATAATCAATTGTTTCAAAGCAGGATGAGAAAGGCCACATTTTCTGGGTAATGCTCTGAGCTCCACTCTGCACCATTCTGTTTCTGGGGTCTCAGGTGCATCAGCCCCATAGCCTGTCTTTCTGGAGAGCAGGTGAGGGGGAGGCCATGGGGAAAGGTCGGGTCAGTGAACCCTCTCTCCTTAGTGAGGGCGGCTGCTGCTCAGTGC i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e tarSyr2.KE938805v1 5718 1162 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=2141992.000000 s hg38.chr14_KI270725v1_random 87571 434 + 172810 ATGTCCTTGCCATGCACC----------------------------------------AGGGCAACATCCTGACCCAGATGCCAGCCACCCTGTCTCACATCCATTTAGAGAGAATCTCCATCTTCTGCCAAGACACTGCCCATGTAGATGAAAA-AGTATTTTGCATCCAAACATATCTTAAGCACTGATTTGAACCTCAATACTTCACACAGATGTCTTTGTCCAGGGTGTGTCAGCCTGGCTCAACAGCAGGGGAAGTGGAGCCAATTACGTCAG-TGTCAGTGGACTGAG----AAACACTCCAGGGAGTAGTTCTCATGCACGACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGAGGACTGGATTTCTGGGAAATGGCTACTGAACAGGCTGCCAGGATCCATATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCGC-- s panTro5.chrY 324013 434 + 26350515 ATGTTCTTGCCATGCACC----------------------------------------ACGGCATCATCCTGACCCAGATGCCAGCCATCCTCTCTCACATCCATTTAGAGAGAATCTCCATCTTCTGCCAAGAGACTGCCCATGTAGATGAAAA-AGTATTTTGCATCCAAACATATCTTAAGCACTGATTTGAACCTCAATACTTCACACAGATGCCTTTGTCCAGGGCGTGTGGGCCTGGCTCAACAGCAGGGGAAGTGGAGTCAATTACATCAG-TGTCAGTGGACTGAG----AAATACTCCAGGGAGTAGTTCTCATGCACCACTACCAATGGCCAGACCAAGGTAGTTCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGAGGACTAGATTTCTGGGAAATGGCTACTGAACAGGCTGCCAGGATCCATATATCCAGATTCAGAAAGACACATCTCTGGATTCAAATGTGC-- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 95633 431 + 1110922 ATGTTCTTGCCATGCACC----------------------------------------AGGGCATCATCCTGACCCAGATGCCAGCCACCCTGTCTCACATCCATTTAGAGAGAATCTCCATCTTCTGCCAAGACACTGCCCATGTAGATGAAAA-AGTATTTTGCCTCCAAACATATCTTAAGCACTGATTTG-ACCTCAATACTTCACACAGATGCCTTTGCCCAGGGCGTGTCGGCCTGGCTCAACAGCAGGGGAAGTGGAGCCAATTACATCAG-TGTCAGTGGACTGAG----AAATACTCCAGGGAGTAGTTCTCATGCACGACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAAC--CCTGCTGCTTTTCCAGAGGACTGGATTTCTGGGAAATGGCTACTGAACAGGCTGCCAGGATCCATATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCGC-- i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 39847 434 - 108979918 ATGTTCTTGCTGTGCACC----------------------------------------AGGGCATCATCCTGACCCAGATGTCAACCTCCCTGTCTCACATCCATTTAGAGAGAGTTTCCATCTTCTGCCAAGACACTGCCCATGTGGATGAAAA-AGTATTTTGCATCCAAATATATCTTAAGCACTGATTTGAACCTCAATAACTCACACTGCTGCCTTTGCCCAGGGCATGTCGACCTGGCTCAACAGCAGGGGAAGTGGAGTCAATTACATCAG-TATCAGTGGACTGAG----AAATACTCCAGGGAGAAGTTCTCATGCACGACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGGGGACTGAATTTCTGGGAAATGGCTACCAAACAGGTTGCCAGGATCCAGATATCCAGATTCGGAGAGATACATCCCTGGATTCAAATACAC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61757257 434 - 96509753 ATGTTCTTGCCATGCACC----------------------------------------AGGGCATCATCCTGACCCAGATGCCAGCCTCTCTGTCTCACATCCATTTAGAGAGAATCTCCATCTTCTGCCAAGACACTGCCCATGTAGACGAAAA-AGTATTTTGCACCCAAATATATCTTAAGCACTGATTTGAACCTCAATACCTCACACTGCTGCTTTTCCCCAGGACAAGTCATCCTCACTGAACAGCAGGGGAAGTGGAGTCAATTACATGAG-TATCAGTGGACTGAG----AAATACTCCAGGGAGAAGTTCTCATGCATAACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGAGGACTGGATTTCTGGGAAATGGCTACCAAACAGGCTACCAGGATCCAGATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 664436 434 + 11597128 ATGTTCTTGCCATGCACC----------------------------------------AGGGCATCATCCTGACCCAGATGCCAGCCTCTCTGTCTCACATCCATTTAGAGAGAATCTCCATCTTCTGCCAAGACACTGCCCATGTAGACGAAAA-AGTATTTTGCACCCAAATATATCTTAAGCACTGATTTGAACCTCAATACCTCACACTGCTGCTTTTCCCCAGGACAAGTCATCCTCACTGAACAGCAGGGGAAGTGGAGTCAATTACATGAG-TATCAGTGGACTGAG----AAATACTCCAGGGAGAAGTTCTCATGCATAACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGAGGACTGGATTTCTGGGAAATGGCTACCAAACAGGCTACCAGGATCCAGATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 172280 434 + 5626091 ATGTTCTTGCCATGCACG----------------------------------------AGGGCATCATCCTGACCCAGATGCCAGCCTCCCTGTCTCACATCCATTTAGAGAGAATCTCCATCTTCTGCCAAGACACTGCCCATGTAGATGAAAA-AGTATTTTGCACCCAAATATATCTTAAGCACTGATTTGAACCTCAATACCTCACACTGCTGCTTTTCCCTAGGACAAGTCATCCTCACTGAACAGCAGGGGAAGTGGAGTCAATTACATGAG-TATCAGTGGACTGAG----AAATACTCCAGGGAGAAGTTCTCATGCACGACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGGGGACTGGATTTCTGGGAAATGGCTACCAAACAGGCTACCAGGATCCAGATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90919074 434 - 107702431 ATGTTCTTGCCGCGCACC----------------------------------------AGGGCATCATCCTGACCCAGATGCCAGCCTCCCTGTCTCACATCCATTTAGAGAGAATCTCCATCTTCGGCCAAGACACTGCCCATGTAGACGAAAA-AGTATTTTGCATCCAAATATATGTTCAGCTCTGATTTGAACCTCAATACCTCACACTGCTGCCTTTCCCCAGGACAAGTCATCCTCACTCGACAGCAGGGGAAGTGGATGCAAGTACATCAG-TATCAGTTCACTGAG----AAATACTCGAGGGAGAAGTTCTCATGCACGACTACCAGTGGCCAGACCAAGGTAGTGCAGTCTGTGGACAAACCTCCGGCTGCTTTTCCAGGGGACTGGATTTCTGTGAAATGGCTACCAAACAGGTTTCCAGGATCCAGATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 219691 434 + 521157 ATGTTCTTGCCGTGCACC----------------------------------------AGGGCATCATCCTGACCCAGATGTCAACCTCCCTGTCTCACATCCATTTAGTGAGAATCTCCATCTTCTGCCAAGACACTGCCCATGTAGATGAAAA-AGTATTTTGCACCCAAATACATCTTAAGCACTGATTTGAACCTCAATACTTCACACTGCTGCTTTTCCCCAGGACAAGTCATCCTTACTGAACAGCAGGGGAAGTGGAGTCAATTACATGTG-TATCAGTGGACTGAG----AAATACTCCAGGGAGAAGTTCTCATGCACGACTACCAGTGGCCAGACCAAGGTAGTGCAGCCTGTGCACAAACCTCCTGCTGCTTTTCCAGGGGACTGGATTTCTGGGAAATGGCTACCAAACAGGCTACCAGGATCCAGATATCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90633151 480 - 108792865 ATGTTCTTACCATGCACCATCAATAATCCTTTCCTCTTTTACTCTTCAGCAGTGAGTGAGAACATCATCCTGACCCAGATGCTAGCCTCCCTGTCTCACATCCATTTAGAGAGAGTCTCCATCTCCGGTCATGCTGCTGCCCACATAGATGAAAAGAATATTTTGAATCCAGATAAACCTTAAGCACTGATGTGAACCTCAATACCTCACACAGCTGCCCTTGCCCAGGGCTTGTTGGCCTGCTTCAGCAGCAGGGGCAGTGCAGCCAACTGCATCAGTTATCAGTGGACTGAAGCCCAGGGACTTCAGGGAGTATTTCTCATGCACAACTAGGAGTAGCTAGACCAAGATAGTGCCATCTGTGCACAAACCTCCTGCTACTTCTCCAAGGGACTGAATTTTAGGGAAATGGCTACCAAACAGCCTGCCAAGATCCAGATGTCCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2373139 467 - 3814455 ATGTTCTTGCCGTGCACCATCAGTAACCCTTTCCTCTTTTACTCTTCAGCAGTGAGTGAGGACACCATCCTGAC--------------CCCTGTCTCACATCCATTTAGAGAGAGTCTCCATTTCCTGCCATGCTGCTGCCCATGTAGATGAAAAAAATATTTTGAATCCAGGTAAACCTTAAGCACTGATTTGAACCTCAAAAAATCACACAGCTGCCCTTGCCCAGGGCATGTTGGCCTGCTTCAGCAGCAGGGGCAGTGCAGCCAACTGCATCAG-TATCAGTGGACTGACGCCCAGGGACTTCAGGGAGGATTTCTCATGCACAACTAGGAGTGACCAGACCGAGATAGTGCCGCCTGTGCATAAACCTCCTGCTGCTTCTCCAAGGGACTCAATTTTAGGGAAATGGCTACCAAACAGCCTGCCAGGATCCAGATGTCCAGATTCAGACAGATACATCTCTAGATTCAAATGTACGT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 447656 478 + 3620821 ATGTTCTTGCTGTGCACCATCAGTAACCCTTTCCTCTTTTACTCTTCAGCAGTGAGTGAGGACATCATCCTGACCCAGATGCCAGCCTCCCTGTTTCACATCCAGTTAGAGAGAGTCTCTATCTCCTGCCATGCCGCTGCCCACATAGACGAAAAAAATATTTTGAATCCAGATAAACCTTAAGCACTGATTTGAACCTCAATACCTCACACAGCTGCCCTTGCCCGGGTCATGTTGGCCTGCTTCAGCAGCAGGGGCAGTGCAGCCAATTGCATCAG-TATCAGTGGACTGACGCCCAGGGACTTCAGGGAGTATTTCTCATGCACAACTAGGAGTAGCCAGACCAAGATAGTGCTGCCTGTGCACAAACCTCCTCCTGCTTCTCCAA-GGACTGAATTTTAGGGAAATGGCTACCAAACAGCCTGCCAAGATCCAGATGACCAGATTCAGAGAGATACATCTCTGGATTCAAATGCAC-- i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e tarSyr2.KE938805v1 5718 1162 + 186790 I e colAng1.NW_012118465v1 182770 0 + 1278784 C e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=7224.000000 s hg38.chr14_KI270725v1_random 88005 2 + 172810 --TT s panTro5.chrY 324447 2 + 26350515 --TT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96064 2 + 1110922 --TT i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40281 2 - 108979918 --TT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61757691 2 - 96509753 --TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 664870 2 + 11597128 --TT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 172714 2 + 5626091 --TT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90919508 2 - 107702431 --TT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 220125 2 + 521157 --TT i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90633631 2 - 108792865 --TT i calJac3.chr14 C 0 I 1 s saiBol1.JH378265 2373606 2 - 3814455 --TT i saiBol1.JH378265 C 0 I 1 s cebCap1.NW_016107537v1 448134 2 + 3620821 --TT i cebCap1.NW_016107537v1 C 0 I 1 s tarSyr2.KE938805v1 6880 3 + 186790 tgt- i tarSyr2.KE938805v1 I 1162 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e colAng1.NW_012118465v1 182770 0 + 1278784 C e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=-3817.000000 s hg38.chr14_KI270725v1_random 88007 1 + 172810 -C s panTro5.chrY 324449 1 + 26350515 -T i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96066 1 + 1110922 -T i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40283 1 - 108979918 -T i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61757693 1 - 96509753 -C i macFas5.chr10 C 0 I 1 s macNem1.NW_012014799v1 664872 1 + 11597128 -C i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 172716 1 + 5626091 -C i cerAty1.NW_012001187v1 C 0 I 1 s papAnu3.chr13 23364865 1 - 128036923 -C i papAnu3.chr13 N 0 I 1105 s chlSab2.chr14 90919510 1 - 107702431 -C i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 220127 1 + 521157 -C i manLeu1.NW_012101586v1 C 0 I 1 s calJac3.chr14 90633634 1 - 108792865 -T i calJac3.chr14 I 1 C 0 s saiBol1.JH378265 2373609 1 - 3814455 -T i saiBol1.JH378265 I 1 C 0 s cebCap1.NW_016107537v1 448137 1 + 3620821 -T i cebCap1.NW_016107537v1 I 1 C 0 s tarSyr2.KE938805v1 6883 1 + 186790 g- i tarSyr2.KE938805v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e colAng1.NW_012118465v1 182770 0 + 1278784 C e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=7098.000000 s hg38.chr14_KI270725v1_random 88008 1 + 172810 T s panTro5.chrY 324450 1 + 26350515 T i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96067 1 + 1110922 T i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40285 1 - 108979918 T i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61757695 1 - 96509753 T i macFas5.chr10 I 1 C 0 s macNem1.NW_012014799v1 664874 1 + 11597128 T i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 172718 1 + 5626091 T i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90919512 1 - 107702431 T i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 220129 1 + 521157 T i manLeu1.NW_012101586v1 I 1 C 0 s calJac3.chr14 90633635 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2373610 1 - 3814455 T i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 448138 1 + 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE938805v1 6884 1 + 186790 t i tarSyr2.KE938805v1 C 0 I 1795 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e papAnu3.chr13 23364866 1105 - 128036923 I e colAng1.NW_012118465v1 182770 0 + 1278784 C e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=639791.000000 s hg38.chr14_KI270725v1_random 88009 132 + 172810 TCTTTGTGCATAATTTTTGCAGTCATTGTTACTACGCCTTGGGGATTCTAGTCATTATACTTCAGCCGACTCTCTATGGCCCTTTCTCCCCTTCACTGCTCTATCTGAACCTGGGGAA-GCAGCTCAGGCTGC s panTro5.chrY 324451 132 + 26350515 TCTTTGTGCATAATTTTAGCAGTCATTGTTACTATGCCTTGGGGATTCTATTCATTATACCTCAGCTGACTTTCTATGGACCTTTCTCCCCTTCACTGCTCTATCTGAACCTGGGGAA-GCAGCTCAGGCTGC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96068 132 + 1110922 TCTTTGTGCATAATTTTAGCAGTCATTGTTACTACGCCTTGGGGATTCTAGTCATTATACTTCAGCTGACTCTCTATGGCCCTTTCTCCCCTTCACTGCTCTATCTGAACCTGGGGAA-GCAGCTCAGGCTGC i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40286 133 - 108979918 TCTTTCTGCATAATTTTAGCAGTCATTGTTACTACCCGTTGGGGATTCTAGTCATTATACTTCAGCTGACTCTCTATGGCCCTTTCTCCCCTTCACTGCTTCATCTGAACCTGGGGAAGGCAGCTCAGGCTGC i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61757696 133 - 96509753 TCTTTCTGCATAATTTTAGCAGTCATTGTTACTATGCCTTGGGGGTTCATGTCATTACACTGCAGCTGACTCTCTATGGCCCTTTCTCCTCATCACTGCTCTATCTGAACCTGGGGAAGGCAGCTCAGGCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 664875 133 + 11597128 TCTTTCTGCATAATTTTAGCAGTCATTGTTACTACGCCTTGGGGGTTCATGTCATTACACTGCAGCTGACTCTCTATGGCCCTTTCTCCTCATCACTGCTCTATCTGAACCTGGGGAAGGCAGCTCAGGCTGC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 172719 133 + 5626091 TCTTTCTGCATAATTTTAGCAGTCATTGTTACTACGCCTTGGGGGTTCATGTCATTACACTCCAGCTGACTCTCTATGGCTCTTTCTCCTCATCACTGCTCTATCTGAACCTGGGGAAGGCAGCTCAGGCTGC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90919513 133 - 107702431 TCTTTCTGCATAATTTTAGCAGTCATTGTTACTACGCCTTGGGGATTCATGTCATTACACTCCGGCTGACTCTCTATGGCCCTTTCTCCTCATCATGGCTCTATCTGAACCTGGGGAAGGCAGCTCAGGCTGC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 220130 133 + 521157 TCTTTCTGCATAATTTTAGCAGTCATTGTTACTACGCCTTGGGGGTTCATGTCATTACACTCCAGCTGACTCTCTATGGCCCTTTCTCCTCATCACTGCTCTATCTGAACCTGGGGAAGGCAGCTCAGGCTGC i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90633636 131 - 108792865 TCTTTCTGTGTAATTTTAGCAGTCATTGTTACTACACCTTGGTGTTTCCATTCAATGTACTTCAGCTGACTGTCTGTGGCCCTGTTTG-TCCTTACTGCTCTCACTGAACCTGGgg-aggcagctctgcctgc i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2373611 132 - 3814455 TTTTTCTGTGTAATTTTAGCAGTCGTTATTACTACACCTTGGTGCTTCAATTCATTGTACTTCAGCTGACTCTCTGTGGCTCTGTTTG-CCCTTACTGCTCTCACTGAAGCTGGGGAAGGCAGCTCTGCCTGC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 448139 133 + 3620821 TCTTTCTGTGTAATTTTAGCAGTCATTGTTACTACACCTTGGTGTTTCTATTCATTGTACTTCAGCTGACTCTCTGTGGCtctgtttgcccctcactgctctcactgaacctggggaaggcagctctgcctac i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e papAnu3.chr13 23364866 1105 - 128036923 I e tarSyr2.KE938805v1 6885 1795 + 186790 I e colAng1.NW_012118465v1 182770 0 + 1278784 C e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1916625.000000 s hg38.chr14_KI270725v1_random 88141 341 + 172810 AAATGAGGCAGACCTCATGGCCTggaattagcaacccctaggacggctgtcaatcagtgatgacaagggaggtgtatacatcccccagctccctcacctctcaggtggaataacagaggc-a-tttttcctgtgtttctatgtaggcttgagctctcgtcatcctcagaggtggctcctt-ctgagacacctttcactttccctttccctcctcccctcccttgctcacttgcttgtttcccgcactttgtaaatatactgcctgcatgcgaatctttgGCATCCTTCTCACTGAGGGGACCCAACCTAATGCATTGG-AAAAATTCTCATTCTTGGAGGGCAT--C- s panTro5.chrY 324583 341 + 26350515 AAATGAAGCAGACCTCATGGCCTggaattagcatcccctaggacgactgtcaatcagtgatgacaagggaggtgtacatatcccccagctccctcacctctcaggtggaataacagagtc-a-tttttcctgtgtttctatgagggcttgagctctcatcatcctcataggtggctactt-ctgagacagctttcactttccctttccctcctcccctcccttgctcacttgcttgtttcccgcactttgtaaatatactgcctgcatgcgaatctttgGCATCCTTCTCACTGAGGGGATCCAACCTAATGCATTGG-AAAAATCCTCATTTTTGGAGGGCAT--C- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96200 338 + 1110922 AAATGAGGCAGACCTCATGGCCTggaattagcat-ccctaggacggctg-caatcagtgatgacaagggaggtgtacacat-ccccagctccctcacctctcaggtggaataacagaggc-a-tttttcctgtgtttctatgtgggcttgagctctcgtcatcctcagaggtggctcctt-ctgaggcacctttcactttccctttccctcctcccctcccttgctcacttgcttgtttcccgcactttgtaaatatactgcctgcatgcgaatctttgGCATCCTTCTCACTGAGGGGACCCAACCTAATGCATTGG-AAAAATCCTCATTCTTGGAGGGCAT--C- i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40419 339 - 108979918 AAATGAGGCAGACCTCACGGCCTggaattaatatcccctaggatggctatctatcagtgatgacaagggaggtatacacatatcccagctccctcacctctcaggtggaagaacagagat-a-tttttcctgtgtttctatgtggacttgagctctcatcatcctcagaggtgactctttgctgaggtacctttcactttccctttccctcctcccttcccttgctcacttgcctgtttcctgcattttgtaaagatactgcctgcatgtgaatctttggcatc---ctcactgaggggacccaacctaaTGCATTGG-AAAAATCCTCATTTTTGGAAGGCATT--- i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61757829 341 - 96509753 AAATGAGGCAAACATCATGGCCTggaattagcatcctctaggatggctatcaatctctgatgacaaaggaggtgtacacataccccagctccctcacctctcaggtggaataacagaggc-c-tttttccagagtttccatgagggcttgagctctcgtcatcctcagaggtggctctttgctgaggtacctttcacttcccctttccctcctctcttcccttgctcacttgcttatttcctgcacattgaaaatatactggctgcatgggaatctttggcatccttctcactgaggggacccaacctaaTGCATTGG-AAAAATCCTCATTCTTGGAGGGCAT---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 665008 341 + 11597128 AAATGAGGCAAACATCATGGCCTggaattagcatcctctaggatggctatcaatctctgatgacaaaggaggtgtacacataccccagctccctcacctctcaggtggaataacagaggc-c-tttttccagagtttccatgagggcttgagctctcgtcatcctcagaggtggctctttgctgaggtacctttcacttcccctttccctcctctcttcccttgctcacttgcttatttcctgcacattgaaaatatactggctgcatgggaatctttgGCATCCTTCTCACTGAGGGGACCCAACCTAATGCATTGG-AAAAATCCTCATTCTTGGAGGGCAT---- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 172852 341 + 5626091 AAATGAGGCAAACATCATGGCCTggaattagcatcctctaggatggctatcaatctctgatgacaaaagaggtgtacacataccccagctccctcacctctcaggtggaataacagaggc-c-tttttccggagtttccatgagggcttgagctctcgtcatcctcagaggtggctctttgctgaggtacctttcattttccctttccctcctctcttcccttgctcacttgcttatttcctgcacattgaaaatatactggctgcatgggaatctttgGCATCCTTCTCACTGAGGGGACCCAACCTAATGCATTGG-AAAAATCCTCATTCTTGGAGGGCAT---- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90919646 341 - 107702431 AAATGAGGCAAACATCATGGCCTggaattagcatcctctaggatggctatcaatctctgatgacataggagctgtacacataccccagctccctcacctctcaggtggaataacagaggc-c-tttttccggagtttccatgagggcttgagctctcgtcatcctcagtggtggctctttgctgaggtacctttcactttccctttccctcctctcttcccttgctcacttgcttatttcctgcacattgaaaatatactggctgcatgggaatctttggcatccttctcactgaggggacccaacctaaTGCATTGG-AAAAATCCTCATTCTTGGAGGGCAT---- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 220263 341 + 521157 AAATGAGGCAAACATCATGGCCTggaattagcatcctctaggatggctgtcaatctctgatgacaaaggaggtgtacacataccccagctccctcacctctcaggtggaataacagaggc-c-tttttccggagtttccatgagggcttgagctctcgtcatcctcagaggtggctctttgctgaggtacctttcactttccctttccctcctctcttcccttgctcacttgcttatttcctgcacattgaaaatatactggctgcatgggaatctttgGCATCCTTCTCACTGAGGGGACCCAACCTAATGCATTGG-AAAAATCCTCATTCTTGGAGGGCAT---- i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 182770 337 + 1278784 AAATGAGGCAGAACTCATGGTCTggaattagcatcccctaggatggctgtcaatcagtgatgacaaagtaggtgtacacataccccagctccctcacatctcagatggaataacagaggcat-tttttcctgtgtttctatgtgggcttgagctctcgtcatcctcagaggtggctccct-ctgaggcacttttaa------ctttcccccctcccctcccttgctctcttgcttgtttcctgcactttgtaaatatactgcttgcatgggaatctttgtcatccttctcactggggggattcaaccaaagGTACTGGAAAAAATCCTCATTCTTGGAGGGCAT-C-- i colAng1.NW_012118465v1 C 0 I 2 s calJac3.chr14 90633767 336 - 108792865 aaatgtggcagaccttatttcctaaaattaacatcctctaggaccgctatcaatcagtaattgcatgggaggtgtagatataccccagctccctcacttctcaaatagaaaaacAGAGGC-A-GTTTTCATGTGTCTCTGTGTGGGCTTGGGCTCTTGTTATCCTCAGAGGTGGCTCCTTGCTGAGGGAtgtttca------ctgtccctcctcccctcccttgctcacttgcttatttcctgcactctgtaaatacactgcctgcatggaaatctttgtcatccttctcactggggggacccaacctaaaacaCTGA-AAAAATCCTCATTCTTGGAAGACAT---C i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2373743 336 - 3814455 AAATGTGACAGACCTTA-CGCCTAAAATTAACATCCTCTAGGACCGCTATCAATCAGCAATTACATGGGGggtgtagatatagcccagttccctcacttctctggtagaataacagaggc-attttttcctgtgtccctgtgtgggcttgagctcttgttatcctcagaggtggctccttgctgagggatgtttca------ctgtccctccttccctcccttgctcacttgcttatttcctgcactttgtaaatacactgcctgcatggaaatctttgtcatccttctcactggggggacccaacctaaaacTTTGG-GAAAATCCTCATTCTTGGAAGACAT---T i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 448272 337 + 3620821 aaatgtggcagaccttattgcctaaaattaacaacctctaggaccgctatcaatcagtaattccatgagaggtgtagatataccccagctccctcacctctcaggtagaaaaacagaagc-attttttcctgtgtctctgtgtgggcttgagctcttgttatcctcagaggtggctccttgctgagagatgtttca------ctgttcctcctcccctcccttgctcacttgcttatttccTGCAAGTTGTAAATACACTGCCCGCATGAAAATCTTTGTCATCCTTCTCACTGGGGGGACCCCACCTTAAACATTTG-AAAAATCCTCATTCTTGGAAGACAT---C i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e papAnu3.chr13 23364866 1105 - 128036923 I e tarSyr2.KE938805v1 6885 1795 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1088591.000000 s hg38.chr14_KI270725v1_random 88482 236 + 172810 ATTG-GTTTGAATTATTGCCACTTCTCCTGTTTTAATGCCTAGGGAAATTCCAAAAATTTAGGAAATCTTTAAATTCCCTTTGCCAATCTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTCTCTAGGTCACAAAATCACAGAAGCCTTCCACAAATGGCTACACAACATAGAGTCCACATAGAGCAGAGACTCAGAATC-TCCCAGGATTTGACATCCACACATCAGACAGTCCT s panTro5.chrY 324924 236 + 26350515 GTTG-GTTTGAATTATTGCCACTTCTCGTGTTTTAATGCATAGGGAAATTCCAAAAATTTAGAAAATCTTTAAATTCCCTTTGCCAATCTTTCATAGATTTGATTTTAGCAGAGATTCATTTTCTCTAGGTCACAAAATCACAGAAGCCTTCCACAAATGGCTACACAACATAGAGTCCACATAGAGCAGAGACCCAGAATC-TCCCAGGATTTGACATCCACACATCAGACAGTCCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96538 236 + 1110922 GTTG-GTTTGAATTATTGCCACTTCTCATGTTTTAATGCATAGGGAAATTCCAAAAATTTAGGAAATCTTTAAATTCCCTTTGCCAATCTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTCTCTAGGTCACAAAATCACAGAAGCCTTCCACAAATGGCTACACAACATAGAGTCCACATAGAGCAGAGACTCAGAATC-TCCCAGGATTTGACATCCACACATCAGACAGTCCT i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40758 236 - 108979918 GTTG-GTTTGAATTATTGTCAATTCTCATGTTTTAATGCATAGGGAAATTCCAAACATTTTTAAAATCTTTAAATTCCCTTTGCCAATCTTCCTTAGATTTGATTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGACACCTTCCACAAATGGCTACACAGCATGGAGTCCACATAGAGCAGAGAGTCCGAATC-CCTCAGAATTTGACATCCCCACATCAGAGAGTCCT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61758170 209 - 96509753 ----------------------------CATTTTAATGCATAGGGAAATTCCTAAAATTTAAGAAATCTTTAAATTCCCTTTGCCAAACTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTACACACCATGGAGTCCACATAGAGCAGAGAGTCCAAATC-CCCCAGAATTTGACATCCCCACATCAGAGAGTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 665349 209 + 11597128 ----------------------------CATTTTAATGCATAGGGAAATTCCTAAAATTTAAGAAATCTTTAAATTCCCTTTGCCAAACTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTACACACCATGGAGTCCACATAGAGCAGAGAGTCCAAATC-CCCCAGAATTTGACATCCCCACATCAGAGAGTCCT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 173193 209 + 5626091 ----------------------------CATTTTAATGCATAGGGAAATTCCTAAAATTTAAGAAATCTTTAAATTCCCTTTGCCAATCTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTACACACCATGGAGTCCACATAGAGCAGAGAGTCTGAATC-CCCCAGAATTTGACATCCACACATCAGAGAGTCCT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90919987 207 - 107702431 ----------------------------CATTTTAAGGCATAAGGAAATTCCTAAAATTCAAGAAATCTTTAAATCTCCTTTGCCAATCTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTACACACCA--GAGTCCACATAGAGCAGAGAGTTCGAATC-CCCCAGAATTTGACATCCACACATCAGAGAGTCCT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 220604 209 + 521157 ----------------------------CATTTTAATGCATAGGGAAATTCCTAAAATTTAAGAAATCTTTAAATTCCCTTTGCCAATCTTTCTTAGATTTGATTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTACACACCATGGAGTCCACATAGAGCAGAGAGTCCGAATC-CCCCAGAATTTGACATCCACACATCAGAGAGTCCT i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90634103 236 - 108792865 -TTT-GCTTGAATTACTGCCACCTCTCATGTTTTAATGCATAAGAAAATTCAGAAAATTTAAGAAATATTTAAATTCCCTTTGCTAGTCTTCCTTAGATTTGTTTTTAGCAGAGATTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTGCACACCATGGAGTTCACTCAGAGCAGAGAATCAGAATCCCCCCAGAATCTGAGATCCACACATTAGAGAGTCCT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2374079 237 - 3814455 -TTTGGTTTGAATCACTGCCATCTCTCATGTTTTAATGTATAAGAAAATTCAGAAAATTTAAGAAATATTTAGATTCCCTTTGCTAGTCTTCCTTAGATTTGTTTTTAGCAGAGAGTCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTGCACACCATGGAGTCCACTCAGAGCAGAGAATCAGAATCCCCCCAGAATCTGAGATCCACACATCAGAGAATCCT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 448609 236 + 3620821 -TTG-GTTTGAATTACTGCCACTTCTCATGTGTTAATGCATAAGAAAATTCAGAAAATTTAAGAAATATTTAAATTCCCTTTGCTAGCCTTCCTTAGATTTTCTTTTAGCAGAGATCCATTTTTTCTAGGTCACAAAATCAAAGAAGCCTTCCACAAATGGCTGCACACCATGGAGTCCACTCAGAGCAGAGAATCAGAATCGCCCCAGAATCTGAGATCCACACATCAGAGAATCCT i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e papAnu3.chr13 23364866 1105 - 128036923 I e tarSyr2.KE938805v1 6885 1795 + 186790 I e colAng1.NW_012118465v1 183107 2 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=3037865.000000 s hg38.chr14_KI270725v1_random 88718 515 + 172810 AGAGTCTCAGG-TTTTTTCTAGGTCGATCGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACCTTAGGGGAAGACCATTGTGTGGATGATGAGAGTTGTTTGTGGAATAaataatacaccc--actaaagacatcattgtcctaatatctggaatctatgatcattacttatgaatatgtc-aaaaataacttggcagacatggttg-----agaatttgggggtcaggagagtatcctgaattatctgggtgagaccatcataatcacaagggtccttacaatagggagggaggaaggtaacagccagagaggacctgggacaacggacagggaaactggagtgatggaggtaggggccatgctgctaggaatgtgggaacatcagaaagatggaatgctcgatattggattctctctcttgaagcct--agactgaatagagcc-ctattactccttgattttacttcattgagacttctgacctccagaaatgtaaggtaatacagttgtattatgtgtag s panTro5.chrY 325160 515 + 26350515 AGAGTCTCAGG-TTTTTTCTAGGTCAATCTCCTCATAAATCTGCCTTGTGATATTTTTATTCTACCTTAGGGGAAGACCATTGTGTGGATGATGAGAGTTGTTTGTGCAATGAATTATACAccc--attaaagacatcactgtcctaatatctggaatctatgatcattacttatgaatatgtc-aaaaataacttggcagacatggttg-----agaattttggggttaggagagtatcctgaattatctgggtgagaccatcataatcacaagggtccttacaatagggagggaggaaggtaacagccagagaggatctgggacaacggacagggaaactggagtgatggaggaaggaaccatgctgctaggaatgtgggaacaccagaaagatggaatgctcgatactggattctctctcttgaagcct--agaatgaatagagcc-ctattactccttgattttacttcattgagacttctgacctccagaaatgtaagataatacacttgtgttatgtggag i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 96774 514 + 1110922 AGAGTCTCAGG-TTTTTTCTAGGTCGATCGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACCTTAGGGGAAGACCATTGTGTGGATGATGAGGGTTGTTTGTGGAATgaataatacaccc--actaaagacatcattgtcctaatatctggaatctatgatcattacttatgaatatgtc-aaaaataacttggcagacatggttg-----agaattttggggtcaggagagtatcctgaattatctgggtgagaccatcataatcacaagggtccttataatagggaaggaggaaggtaacagccagagaggacctgggacaa-ggacagggaaactggagtgatggaggaaggggccatgctgctaggaatgtgggaacatcagaaagatggaatgctcgatattggattctctctcttgaagcct--agaatgaatagagcc-ctattactccttgattttacttcattgagacttctgacctccagaaatgtaagataatacacttgtgttatgtggag i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 40994 516 - 108979918 AGAGTCTCAGG-TTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTCGTGATATTTTTATTCTACTTTAGGGGAAGACCATCGTGGGGATGATGAAAGTTGTTTGGGGAATgaataatacgcccctcctaaagacatcattgtcctaatatctggaatctatgatcattacttatgaatatgtc-aaaaataacttggcagacatggtta-----agaattttgaggtcaggagagtatcctgaattatctgggtgaaac---cataatcacaggggtccttataatcaggagggagaagggtcacacccagagaggagctgggacaatggagaggcttgctggagtgatggacgaaggagacatggagccaggaatgtgggaacatcaaaaagatggaaagctcgatattggattctctttcttgaagcctccagaatgaatagagtc-ctattactccttgattttacttcattgagacttctgacctccagaaatgtaagataatacacttgtgttatgtggag i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61758379 525 - 96509753 GGAGTCTCAGG-TTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACTTTAGGGGAAGACCATCGTGGGGATGATGAAAGTTGTTTGGGGAATgaataatacgcccctcctaaagacatcattgtcctaatatctggaatctatgattattacttattaatatgtcaaaaaataacttggcagacatggttaagttgagaattttgaagtcaggagagtatcctgaattatctgggtgagaccagcataatcacaagggtccttataatagggagggaggagggtaacagccagaagggacctcggacaacggagagtgaaactggagtgatggaggaaacggccttggtgccaggaacctgggaacatcaaaaagatgggacactcgatattggattctctctcttgaagactccagaattaatagagcc-ctattactccttgattttatttcattgagacttctgacctctagaaatgtaagataatacacttgtgttatgtggag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 665558 525 + 11597128 GGAGTCTCAGG-TTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACTTTAGGGGAAGACCATCGTGGGGATGATGAAAGTTGTTTGGGGAATgaataatacgcccctcctaaagacatcattgtcctaatatctggaatctatgattattacttattaatatgtcaaaaaataacttggcagacatggttaagttgagaattttgaagtcaggagagtatcctgaattatctgggtgagaccagcataatcacaagggtccttataatagggagggaggagggtaacagccagaagggacctcggacaacggagagtgaaactggagtgatggaggaaacggccttggtgccaggaacctgggaacatcaaaaagatgggacactcgatattggattctctctcttgaagactccagaattaatagagcc-ctattactccttgattttatttcattgagacttctgacctctagaaatgtaagataatacacttgtgttatgtggag i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 173402 519 + 5626091 AGAGTCTCAGG-TTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACCTTAGGGGAAGACCATCGTGGGGATGATGAAAGTTGTTTGAGGAAGGAATCATACGCCcctcctaaagacatcattgtcctaatatctggaatctatgattattacttattaatatgtc-aaaaataacttggcagacatggttg-----agaattttgaagtcaggagagtatcctgaattatctgggtgagaccagcataatcacaagggtccttataatagggagggaggagcgtaacagccagaggggacattggacaacagagagtgaaactggagtgatggaggaaacggccttggtgccaggaacctgggaacatcaaaaagatgggacactcgatattggattctctctcttgaagactccagaattaatagagcc-ctattactccttgattttatttcattgagacttctgacctctagaaatgtaagataatacacttgtgttatgtggag i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90920194 524 - 107702431 AGAGTCTCAGG-TTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACTTTAGGGGAAGACCATTGTGGGGATGATGAAAGTTGTTTGGGGAATgaataatacacccctcctcaagacatcattgtcctaatatctggaatatatgattattacttattaatatgtc-aaaaataacttggcagatatggttaagttgagaattttgaggtcaggagagtttcctgaattatctgggtgagaccagcataatcacaagggtccttataatagggagggaggagggtaacagccagaggggacctcggacaacggagagtgaaactggagtgatggaggaaatggccttggtgccaggaacatgggaacatcaaaaagatgggacactcgatattggattctctctcttgaagactctagaatgaatagagcc-ctattactccttgattttacttcactgagacttctgacctccagaaatataagataatacacttgtgttatgtggag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 220813 524 + 521157 AGAGTCTCAGA-TTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTGTGATATTTTTATTCTACTTTAGGGGAACACCATCGTGGGGATGATGAAAGTTGTTTGGGGAATGAATCATACGCCcctcctaaagacatcattgtcctaatatctggaatctatgattattacttagtaatatgtc-aaaaataacttggcagacatggttaagttgagaattttgaagtcaggagagtatcctgaattatctgggtgagaccagcataatcacaagggtccttataatagggagggaggagcataacagccagaggggacatcggacaacggagagtgaaactggagtgatggaggaaacggccttggtgccaggaacctgggaacatcaaaaagatgggacactcgatattggattctctctcttgaagactccagaattaatagagcc-ctattactccttgattttatttcattgagacttctgacctctagaaatgtaagataatacacttgtgttatgtggag i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 183109 518 + 1278784 AGAGTCTCAGGTTTTTTTCTAGGTCTATTGCCTCATCAATCTGCCTTGTGATATTTTTATTCTACCTTAGGGCAAGACCATCGTGGGGATAATGAGACTTGTTTGTGAAATgaataatacatcc--cctaaagacatcattgtcctaatatctggaatctatgattattacttatgaatatgcc-aaaagtaacttgacagacaaggtta-----agtattttgaggtcaggagagtatcctgaattatctgcgtgagaccagcataatcacaagggtccttataatagggaaggagaagggtcacatccagagaggagctgggacaatagagaggggtgctagagtgatgaagaaagggtccatggagccacgaatgtgggaacatctgaaagatggaaagctgagtattggattttctctcttgatgcctccagagtgaatacagtc-ctattactccttgattttacttcgttgagacttttaacctccagaaatgtaagataatacacttgtgttgtgtggag i colAng1.NW_012118465v1 I 2 C 0 s calJac3.chr14 90634339 519 - 108792865 GGAGTCTCAGGTTTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTATGACATTTTTATTCTACCTTAGGGCAAGACCATTGTAGGGATGATGAAAATAGTTTGTGGAATgaataacgcacttc-cctaaagacatcattgttctaatatctggaatctatgattattacttatgaatatgtc-aaaaataactgggcagacatagata-----agaatttggaggtcaggaaagacttctgaattatctgggtaagaccagcataatcacaaagttacttctaatagagagggagtagcatcactgccagaatggatctgggacaatggagagggatgctggaatgaggaaggaagggtccatggagccaggaatatgggaacatctgaaagatggaaagctggagattggattgtctctcctgaagcctccagactgaatacagcc-atattacttcttgattttacttcattgagacttctgaccttcagaaaggtgatataatacacttgtgttacgtggag i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2374316 519 - 3814455 GGAATCTCAGGTTTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTATGACATTTTTATTCTACCTTTGGGCAAGACTATTGTGGGGATGATGAGAATTGTTTGTGGAATgaataatgcacttc-cctaaagacatcattgttctaatatctggaatctatgattattacttataaatatgtc-aaaaattacttggcagacatggata-----agaatttggaggtcaggaaagtattctgaattatctggatgagaccagcataatcacaaagtttcttataatagagagggagtagcatcactgccagaatggatctgggacaatggagagggatgctggaatgaggtaaggaggggccatggagccaggaatatgggaacatctgaaagatggaaagctgtagattggattgtctctcctgaagcctccggaatgaatacagcctttattacttcttgattttacttcattgagacttctgacctccagaaa-gtaatataatacacttatgtcatgtggag i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 448845 519 + 3620821 GGAGTCTCAAGGTTTTTTCTAGGTCTATTGCCTCATAAATCTGCCTTATGACATTTTTATTCTACCTTAGGGCAAGGCCATTGTGGGGATGATGAGAATTGTTTGTGGAATgaataatgcacttc-cctaaagacatcattgttctaatatctggaatctatgaatattacttatgaatatgtc-aaaaataacttggcagacatggata-----ataatttggaggtcaggaaagtattctgaattatctggatgagaccagcataatcacaaaggttcttataatagagagggagtagcatcattgccagaatggatttgggacaatggagaggaatgctggaatgacataggaagggcccatggagccaggaatatgggaacatctgaaagatggaaagctggagattggattctctctcctgaagcctccagaatgaatacagcc-ttattacttcttgattttacttcatcgagacttctgacctccagaaaggtaatataatacacgtgtgttatgtggag i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e rhiBie1.NW_016814605v1 74724 54556 + 254590 I e rhiRox1.KN299071v1 180140 1978 - 199907 I e papAnu3.chr13 23364866 1105 - 128036923 I e tarSyr2.KE938805v1 6885 1795 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=15300.000000 s hg38.chr14_KI270725v1_random 89233 1 + 172810 c s panTro5.chrY 325675 1 + 26350515 c i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 97288 1 + 1110922 c i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 41510 1 - 108979918 c i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61758904 1 - 96509753 c i macFas5.chr10 C 0 I 1 s macNem1.NW_012014799v1 666083 1 + 11597128 c i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 173921 1 + 5626091 c i cerAty1.NW_012001187v1 C 0 I 1 s papAnu3.chr13 23365971 1 - 128036923 c i papAnu3.chr13 I 1105 N 0 s chlSab2.chr14 90920718 1 - 107702431 c i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 221337 1 + 521157 c i manLeu1.NW_012101586v1 C 0 I 1 s nasLar1.chr13 22560567 1 - 126811233 c i nasLar1.chr13 N 0 N 0 s colAng1.NW_012118465v1 183627 1 + 1278784 c i colAng1.NW_012118465v1 C 0 I 1 s rhiRox1.KN299071v1 182118 1 - 199907 c i rhiRox1.KN299071v1 I 1978 N 0 s rhiBie1.NW_016814605v1 129280 1 + 254590 c i rhiBie1.NW_016814605v1 I 54556 N 0 s calJac3.chr14 90634858 1 - 108792865 c i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2374835 1 - 3814455 c i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 449364 1 + 3620821 c i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE938805v1 8680 1 + 186790 c i tarSyr2.KE938805v1 I 1795 I 5628 e ponAbe2.chrUn 2094174 6207 + 72422247 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=894480.000000 s hg38.chr14_KI270725v1_random 89234 151 + 172810 -tgtaaggttgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAAGGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TCTGTTCTCCCAAATAGTTCTGTGTTTTTGTG-TTTGCTGTCAATTTCAAGAAGAGACAGAAA s panTro5.chrY 325676 151 + 26350515 -agtaaggttgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAAGGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TCTGTTCTCCCAAATAGTTCTGTGTTTTTGTG-TTTGCTGTCAATTTCAACAAGAGACAGAAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 97289 151 + 1110922 -agtaaggttgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAAGGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TCTGTTCTCCCAAATAGTTCTGTGTTGTTGTG-TTTGCTGTCAATTTCAACAAGAGACAGAAA i gorGor5.CYUI01015696v1 C 0 C 0 s rheMac8.chr13 41512 152 - 108979918 -tgtaaggctgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAAGGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCCTTT-GTTCTCCCAAATAGTTCTATGTTGTTATCTTTTGCTGACAATTTCAACGAGAGACAGAAA i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61758906 152 - 96509753 -agtaaggctgtggtaattagttacagcagcaacaggaaaccaatgcaAGGGGGAAAGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TA-GTTCTCCCAAATAGTTATATGTTGTTGTCTTTTGCTGTCAATTTCAACAAGAGACAGAAA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014799v1 666085 152 + 11597128 -agtaaggctgtggtaattagttacagcagcaacaggaaaccaatgcaAGGGGGAAAGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TA-GTTCTCCCAAATAGTTATATGTTGTTGTCTTTTGCTGTCAATTTCAACAAGAGACAGAAA i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 173923 151 + 5626091 -agtaaggctgtggtaattagttacagcagcaacaggaaaccaatgcaA-GGGGAAAGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TA-GTTCTCCCAAATAGTTATATGTTGTTGTCTTTTGCTGTCAATTTCAACAAGAGACAGAAA i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90920720 152 - 107702431 -agtaaggctgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAAGGGG-TGTGTTTTACTTCCCC-AGTGTATCACTGTCC-TCTGTTCTCCCAAATAGTTATATGTTGTTGTCTTTTGCTGTCAATTTCAACGAGAGATAGAAA i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 221339 151 + 521157 -agtaaggctgtggtaattagttacagcagcaacaggaaaccaatgcaA-GGGGAAAGGG-TGTGTTTTACTTCCCT-AGTGTATCACTGTCC-TA-GTTCTCCCAAATAGTTATATGTTGTTGTCTTTTGCTGTCAATTTCAACAAGAGACAGAAA i manLeu1.NW_012101586v1 I 1 C 0 s colAng1.NW_012118465v1 183629 154 + 1278784 -agtaaggttgtggtattttgttgcagcagcaacaggaaaccaatgcaA-GGGGAAGGGGTTGTGTTTTACTTCCCTGAGTGTATTATTGTCC-TCTGTTCTCCCAAATAGTTCTATGTTGTTGTGTTTTGCTGCCAATTTCGACAAAAGACAGAGA i colAng1.NW_012118465v1 I 1 C 0 s calJac3.chr14 90634859 154 - 108792865 cagtaaggttgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAGGTGG-TGTCTGTTACTTCCCTGAGTATATCATTGTCC-TCTATTCTCCCAAACAGTTCTATGTTGTCATCTTTTGCTGTCAATTTTGACAAGAGTCAGAGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2374836 151 - 3814455 cagtaaggttgtggtaatttgttacagcagcaacaggaaaccaatgcaA-GGGGAGGGGG-TGTCTG---CTTCCCTGAGTGTATCATTGTCC-TCTGTTCTCCCAAACAGTTCTATGTTGTCACCTTTTGCTGTCACTTTTGACAAGAGTCAGAGA i saiBol1.JH378265 C 0 N 0 s cebCap1.NW_016107537v1 449365 153 + 3620821 cagtaaggttgtggtaatttgctacagcagcaacaggaaaccaatgcaA-GGGGAGG-GG-TGTCTGTTACTTCCCTGAGTGTATCACTGTCC-TCTGTTCTCCCAAACAGTTCTATGTTGTCATCTTTTGCTGTCAATTTTGACAAGAATCAGAGA i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=29241.000000 s hg38.chr14_KI270725v1_random 89385 8 + 172810 ACATTTTT s panTro5.chrY 325827 8 + 26350515 TCACTTTT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01015696v1 97440 8 + 1110922 ACATTTTT i gorGor5.CYUI01015696v1 C 0 N 0 s rheMac8.chr13 41664 8 - 108979918 CCATTTTT i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61759058 8 - 96509753 CCATTTTT i macFas5.chr10 C 0 I 1 s macNem1.NW_012014799v1 666237 8 + 11597128 CCATTTTT i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 174074 8 + 5626091 CCATTTTT i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 90920872 8 - 107702431 CCACTTTT i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 221490 8 + 521157 CCATTTTT i manLeu1.NW_012101586v1 C 0 I 1 s colAng1.NW_012118465v1 183783 7 + 1278784 ACAA-TTT i colAng1.NW_012118465v1 C 0 I 1 s calJac3.chr14 90635013 8 - 108792865 ACATGTTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219047 8 - 3814455 ATGTTTTG i saiBol1.JH378265 N 0 C 0 s cebCap1.NW_016107537v1 449518 8 + 3620821 ACATTTTT i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=811790.000000 s hg38.chr14_KI270725v1_random 89393 155 + 172810 CTATGAGGAGAGCTAACACCACAATTCTTCTTACGTAGAAAGTGTCTTGAGTAATTCTCTAGGTTAGGTCTTGTATAATCTTGGTATCTGAGAGCCTGGAGGTCATCCCTCACAGCACATGAGAAGAGGAAGGGGATGCGGGTTTGCTGTTTTAA s panTro5.chrY 325835 155 + 26350515 CTATGAGGAGAGCTAGCACCACAATTCTTCTTATGTAGAAAGTGTCCTGAGTAATTCTCTGGGTTAGGTCTTGTACAATCTTGGTATCTGAGAGCCTGGAGGTCATCCCTCACAGCACATGAGAAGAGGAAGGGGATGCAGGTTTGCTGTTTTAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 0 152 + 24701 CTATGAGGAGAGCTAGGACCACAATTCTTCTTGTGTAGAAAGTGTCTTGAGTAATTCTCTGGGTTAGGTCTTGTACAATCTTGGTATCTGAGAGCCTGGAGGTCATCCCTCACAGCACAT---AAGAGGAAGGGGATGCGGGTTTGCTGTTTTAA i gorGor5.CYUI01005671v1 N 0 C 0 s rheMac8.chr13 41673 155 - 108979918 CTATGAGGAGAGCTAGCGCCAGAATTCTTCTTACATAAAAAGTGTCTTGAGTAATTTTGTGGGTTAGGTCTTGTACAATCTTGGTATCTGGGAGCCTGGAGGTCATCTCTCACAGCACATGAGAAGAGGAGGGAGCTGTGGGTTTGCTTTTTTAA i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61759067 154 - 96509753 CTATGAGGAGAGCT-GCACCACAATTCTTCTTACATAGAAAGTGTCTTGAGTAATTCTGTGGGTTAAGTTTTGTACAATCTTGGTATCTGGGAGCCTGGAAGTCATCTCTCACAGCACATGAGCAGAGGAGAGGGCTGTAGGTTTGTTGTTTTAA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014799v1 666246 154 + 11597128 CTATGAGGAGAGCT-GCACCACAATTCTTCTTACATAGAAAGTGTCTTGAGTAATTCTGTGGGTTAAGTTTTGTACAATCTTGGTATCTGGGAGCCTGGAAGTCATCTCTCACAGCACATGAGCAGAGGAGAGGGCTGTAGGTTTGTTGTTTTAA i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 174083 154 + 5626091 CTATGAGGAGAGCT-GCACCACAATTCTTCTTACATAGAAAGTGTCTTGAGTAATTCTGTGGGTTAAGTTTTGTACAATCTTGGTATCTGGTAGCCTGGAAGTCATCTCTCACAGCACATGAGCAGAGGAGAGGGCTGTAGGTTTGTTGTTTTAA i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90920881 154 - 107702431 CTATGAGGAGAGCT-GCACCACAATTCTTCTTACATACAAACTATCTCGAGTAATTCTGTGGGTTAGGTCTTGTACAATCTTGGTATCTGGGAGCCTGGAGGTCATCTCTCAGAGCACATGAGCAGAGGAGAGGGCTGTAGGTTTGTTGTTTTAA i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 221499 154 + 521157 CTATGAGGAGAGCT-GCACCACAATTCTTCTTACATAGAAAGTGTCTTGAGTAATTCTGTGGGTTAAGTTTTGTACAATCTTGGTATCTGGGAGCCTGGAAGTCACCTCTCACAGCACATGAGCAGAGGAGAGGGCTGTAGGTTTGTTGTTTTAA i manLeu1.NW_012101586v1 I 1 C 0 s colAng1.NW_012118465v1 183791 155 + 1278784 CTATGACCAGAGCTAGCACCAGAATTATTCTTATGTAGAAAGTCTCTTGAGTAAATCTCTGGGTTAGGTCTTGTACAGTCTTGGTATCTGAGAGCCTGGAGGTCATCTCTCACAGCACATGAGCAGAGGAGGGGGCTATGGGTTTGCTATTTTAA i colAng1.NW_012118465v1 I 1 I 39 s calJac3.chr14 90635021 155 - 108792865 CTATGAGGAAAGGTAGACCCAGAATTCTTCTTATGTAGAAAGTGTGTTGAGTTAATCTCTGGATTAAGTCTTATACCATCTTGGTGTCTGAAAGCCTGGAGGTCATCTCTCACACCACATGAGAAGAGGAGAGGGCTATGGGTTTGCTGTTTTAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219055 145 - 3814455 CTATTAAGAGAGCTATCACAAGAGTTAGTCTTAGGAAGAAAATCTCTTGGTTAAATCCCTTGATT-GTTCTTGTA-CATCTGGGTATCTGAGAGCCCAGATGTCAGCTCTCAGAACACATGAGAAGGGG--------ATTTTTTATTTGTTTTCA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 449526 154 + 3620821 CTACGAGGAAAGGTAGACCCAGAATTCTTCCTATGTAGAAAGTCTGTGAAGTCAATCTCTGGGTTAGGTCTTCTACAGTCTTGGTATCTGAGAGCCTCGAGGTCATCTCTCACATCACATGAGAAGAGG-AGGGGCTATGGGTTTGCTGTTTTAA i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=136563.000000 s hg38.chr14_KI270725v1_random 89548 30 + 172810 CATTTGTGGGGCAAATTAGATGTACAAGAC s panTro5.chrY 325990 30 + 26350515 CATTTGTGGGGCAAACTAGATGTACAAGAC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 152 30 + 24701 CATTTGTAGGGCAAATTAGATGTACAAGAC i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 41828 30 - 108979918 CATTCGTAGGGCAAATTAGATGTACAGGAC i rheMac8.chr13 C 0 I 10 s macFas5.chr10 61759221 30 - 96509753 CATTCATAGGGAAAATTAGATGTACAAGAC i macFas5.chr10 C 0 I 4 s macNem1.NW_012014799v1 666400 30 + 11597128 CATTCATAGGGAAAATTAGATGTACAAGAC i macNem1.NW_012014799v1 C 0 I 4 s cerAty1.NW_012001187v1 174237 30 + 5626091 CATTCATAGGGAAAATTAGATGTACAAGAT i cerAty1.NW_012001187v1 C 0 I 4 s chlSab2.chr14 90921035 30 - 107702431 CATTCATAGGGAAAATTAGATGTACAAGAC i chlSab2.chr14 C 0 I 4 s manLeu1.NW_012101586v1 221653 30 + 521157 CATTCATAGGGAAAATTAGATGTACAAGAC i manLeu1.NW_012101586v1 C 0 I 4 s calJac3.chr14 90635176 29 - 108792865 CATTCGAAGGG-AAATTAGCTGTACAAGAC i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219200 30 - 3814455 CATTAGAAGGGCCAATTCGATTTACAGGAC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 449680 29 + 3620821 CATTCGAAGGG-AAATTAGCTGTACAAGAC i cebCap1.NW_016107537v1 C 0 I 10 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e colAng1.NW_012118465v1 183946 39 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1232.000000 s hg38.chr14_KI270725v1_random 89578 3 + 172810 TCA s panTro5.chrY 326020 3 + 26350515 CAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 182 3 + 24701 CCA i gorGor5.CYUI01005671v1 C 0 C 0 s macFas5.chr10 61759255 3 - 96509753 TCA i macFas5.chr10 I 4 C 0 s macNem1.NW_012014799v1 666434 3 + 11597128 TCA i macNem1.NW_012014799v1 I 4 C 0 s cerAty1.NW_012001187v1 174271 2 + 5626091 tc- i cerAty1.NW_012001187v1 I 4 C 0 s chlSab2.chr14 90921069 3 - 107702431 TCA i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012101586v1 221687 3 + 521157 TCA i manLeu1.NW_012101586v1 I 4 C 0 s calJac3.chr14 90635205 3 - 108792865 ACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219230 3 - 3814455 ACA i saiBol1.JH378265 C 0 I 12 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e cebCap1.NW_016107537v1 449709 10 + 3620821 I e colAng1.NW_012118465v1 183946 39 + 1278784 I e rheMac8.chr13 41858 10 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=6896.000000 s hg38.chr14_KI270725v1_random 89581 4 + 172810 TTCT s panTro5.chrY 326023 4 + 26350515 TTCT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 185 4 + 24701 TTCT i gorGor5.CYUI01005671v1 C 0 C 0 s macFas5.chr10 61759258 3 - 96509753 -ttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666437 3 + 11597128 -ttt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174273 3 + 5626091 -ttt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921072 4 - 107702431 tttt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 221690 3 + 521157 -ttt i manLeu1.NW_012101586v1 C 0 C 0 s calJac3.chr14 90635208 4 - 108792865 ATCT i calJac3.chr14 C 0 I 3 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2219233 12 - 3814455 I e cebCap1.NW_016107537v1 449709 10 + 3620821 I e colAng1.NW_012118465v1 183946 39 + 1278784 I e rheMac8.chr13 41858 10 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=754957.000000 s hg38.chr14_KI270725v1_random 89585 355 + 172810 TTTATTATTATTAttattattgttctttaagttctagggtacatgtgcacaacgtgcaggtttgttacatacgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtatacctcctaatgctatccctcccccctccccccaccccacaacaggccctggtgtgtgatgttccccttcctgtgtccatatgttctcattgttcaattcccacctgtgagtgagaacatgcagtgattg-------gtttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggctgc s panTro5.chrY 326027 360 + 26350515 TT--TTATCATTAttattattgttctttaaattctagggtacatgtgcacaacgtacaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttatattaggtatacctcttaatgctatccctcccccctccacccaccccacaacaggccctgatgtgtgatgttccccttcctgtgtccatatgttctcattgttcaattcccacctgtgagtgagaacatgcagtgattgtttttttttttttttgtccttgcgatagtttactgagaatgatggcttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggttgc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 189 353 + 24701 TT--TTATTATTAttattattgttctttaagttctagggtacatgtgctcaaggtgcaggtttgttacatatgtatacatgtgtcatgttggtgtgctgcacccattaactcgtcatttacattaggtgtacctcctaatgctatccctgccccctccccccaccccacgacaggccctggtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctgtgagtgagaacatgcagtgattg-------gtttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggctgc i gorGor5.CYUI01005671v1 C 0 C 0 s macFas5.chr10 61759261 340 - 96509753 tt--ttata-----------tatgctttaagttctagggtgcatgtgcacaatgtgcatgtttgttacatatgtatacatgtgccatgttggtgtgcggtacccattaacttgtcatttacattaggtatatctcctaatgctatccctacctcctctccctaccccacaacaggccccggtgtgtgat-ttccccaccttgtgtccaagtgtttccactgttcaattcccacctatgagtgagaacatgtggtttttg-------g-atttttgttcttgcgatagtttgctgagaatgatggatttcagcttcatccatgtcccaagaaaggacatgaactcacccttttttatggctgc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666440 340 + 11597128 tt--ttata-----------tatgctttaagttctagggtgcatgtgcacaatgtgcatgtttgttacatatgtatacatgtgccatgttggtgtgcggtacccattaacttgtcatttacattaggtatatctcctaatgctatccctacctcctctccctaccccacaacaggccccggtgtgtgat-ttccccaccctgtgtccaagtgtttccactgttcaattcccacctatgagtgagaacatgtggtttttg-------g-atttttgttcttgcgatagtttgctgagaatgatggatttcagcttcatccatgtcccaagaaaggacatgaactcacccttttttatggctgc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174276 340 + 5626091 tt--ttata-----------tatactttaagttctagggtgcatgtgcacaatgtgcatgtttgttacatatgtatacatgtgccatgttggtgtgcagtacccattaacttgtcatttacattaggtatatctcctaatgctatccctatctcctctccctaccccacaacaggccccggtgtatgat-ttccccaccctgtgtccaagtgtttccactgttcaattcccacctatgagtgagaatatgtggtttttg-------g-atttttgttcttgcaatagtttgctgagaatgatggatttcagcttcatccatgtcccaagaaaggacatgaactcacccttttttatggctgc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921076 340 - 107702431 tt--ttata-----------tatactttaagttctagggtgcatgtgcacaatgtgcatgtttgttacatatgtatacatgtgccatgttgctgtgcggtacccattaacttgtcatttacattaggtatatctcctaatgctatccctacctcctcgcgctaccccacaacaggccccggtgtgtgat-ttccccaccctgtgtgcgagtgtttccactattcaattcccacctatgagtgagaacaggtggtgtttg-------g-ttttttgttcttgcgatagtttgctgagaatgatggatttcagcttcatccatgtcccaagaaaggacatgaactcacctttttttatggctgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 221693 340 + 521157 tt--ttata-----------tatactttaagttctagggtgcatgtgcacaatgtgcatgtttgttacatatgtatacatgtgccatgttggtgtgctgtacccattaacttgtcgtttacattaggtatatctcctaatgctatccctatctcctctccctaccccacaacaggccccagtgtgtgat-ttccccacccggtgtccaagtgtttccactgttcaattcccaactatgagtgagaacatgtggtttttg-------g-atttttgttcttgcgatagtttgctgagaatgatggatttcagcatcatccatgtcccaagaaaggacatgaactcacccttttttatggctgc i manLeu1.NW_012101586v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2219233 12 - 3814455 I e cebCap1.NW_016107537v1 449709 10 + 3620821 I e calJac3.chr14 90635212 3 - 108792865 I e colAng1.NW_012118465v1 183946 39 + 1278784 I e rheMac8.chr13 41858 10 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=25597.000000 s hg38.chr14_KI270725v1_random 89940 5 + 172810 aAGCG s panTro5.chrY 326387 5 + 26350515 aAGCG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 542 5 + 24701 aAGCG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 41868 5 - 108979918 AAGTG i rheMac8.chr13 I 10 C 0 s macFas5.chr10 61759601 5 - 96509753 aAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666780 5 + 11597128 aAGCA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174616 5 + 5626091 aAGCA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921416 5 - 107702431 aAGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222033 5 + 521157 aAGCA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 183985 5 + 1278784 AAGCG i colAng1.NW_012118465v1 I 39 C 0 s calJac3.chr14 90635215 5 - 108792865 AAGCA i calJac3.chr14 I 3 C 0 s cebCap1.NW_016107537v1 449719 5 + 3620821 AAGCA i cebCap1.NW_016107537v1 I 10 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2219233 12 - 3814455 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=320067.000000 s hg38.chr14_KI270725v1_random 89945 52 + 172810 AGGACTGAGTCAGAGAGATGGGGATGGCAGAGGAGACAAAATGTGGTCAGGG s panTro5.chrY 326392 52 + 26350515 AGAACTGAGTCAGAGAGATGGGGATGGCAGAGGAGATAAAATGTGGTCAGGG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 547 52 + 24701 AGGACTGAGTCAGAGAGATGGGGATGGCAGAGGAGACAAAATGTGGTCAGGG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 41873 52 - 108979918 AGGACTGAGTCAGAGAGATGGGGACGGCAGAGGAGACAAAATGTAGTCAGGG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61759606 52 - 96509753 AGGACTGAGTCAGAGAGATGGGGGTGGCAGAGGAGACTAAATGTGGTCAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666785 52 + 11597128 AGGACTGAGTCAGAGAGATGGGGGTGGCAGAGGAGACTAAATGTGGTCAGGG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174621 52 + 5626091 AGGACTGAGTCAGAGAGATGGGGGTGGCAGAGGAGACTAAATGTGGTCAGGG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921421 52 - 107702431 AGTACTGAGTCAGAGAGATGGGGGTGGCAGAGGTGACTAAATGTGGTGAGCA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222038 52 + 521157 AGGACTGAGTCAGAGAGATGGGGGTGGCAGAGGAGACTAAATGTGGTCAGGG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 183990 52 + 1278784 AGGACTGAGTCAGAGAGATGGGGATGGCAGAGGAGACAAAATGTGGTCAGGG i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635220 52 - 108792865 AGGACTGAGTCAGAGAGATGGGGATGGCCAAGAAGATGAAATGTGGTCAGGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219245 48 - 3814455 AGGACTGAATC--AGTGTTGAGGATGGCAGAGGAGATAAA--GTGCTCAGGG i saiBol1.JH378265 I 12 C 0 s cebCap1.NW_016107537v1 449724 52 + 3620821 AGGACTGAGTCAGAGAGATGGGGATGGCAGAGAAGACGAAATGTGGTCAGGG i cebCap1.NW_016107537v1 C 0 T 65174 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=267530.000000 s hg38.chr14_KI270725v1_random 89997 49 + 172810 CCGTGTAAGATGTGACCCTGCTGCCATATCTGAAAGAAAGGCTGTTGGT s panTro5.chrY 326444 49 + 26350515 CCATGTAAGATGTGACCCTGCTGCCATATCTGAAAGAAAGGCTGTTGGT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 599 49 + 24701 CCGTGTAAGATGTGACCCTGCTGCCATATCTGAAAGAAAGGCTGTTGGT i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 41925 49 - 108979918 CCATGCAAGATGTGACCCTGCTGCCATATCTGAAGGAAACATTCTTGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61759658 49 - 96509753 CCATGCAAGATGTGACTCTGCTGCCATATCTGAAGGAAAGGTTCTTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666837 49 + 11597128 CCATGCAAGATGTGACTCTGCTGCCATATCTGAAGGAAAGGTTCTTGGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174673 49 + 5626091 CCATGCAAGATGTGACTCTGCTGCCATATCTGAAGGAAAGGTTCTTGGT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921473 49 - 107702431 CCATGTACGATGTGACCCTGCTGCCATATCTGAAGGAAAGGTTCTTGGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222090 49 + 521157 CCATGCAAGATGTGACTCTGCTGCCATATCTGAAGGAAAGGTTCTTGGT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184042 49 + 1278784 CAACGCAAGATGTGACCCTGCTGCCATATCTGAAGGAAAGGTTCTTGGT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635272 48 - 108792865 ACATGCAAGATGTGACCTTGCTACTGTATATAAAAA-AAGTTTCTTGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219293 49 - 3814455 CTATGAAAGATGTGCTTCTGCCCCCAAATCTGAAAGCAAGATGTTTGTG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 384602 49 + 3620821 CCATGCAAGATGTGATCCTGCTTCCTTATCTGAAAGAAAGGTACTTGGT i cebCap1.NW_016107537v1 T 65174 I 65186 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=343028.000000 s hg38.chr14_KI270725v1_random 90046 57 + 172810 GTTTGTAAAGGCTTTGGGCAAATTGTGCTTTGTAGACAAAACTGTAGAAGGGTCTGG s panTro5.chrY 326493 57 + 26350515 GTTTGTAAAGGCTTTGGGCAAATTGTGCTTTGTAGACAAAACTGTAGAAGGGTCTGG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 648 57 + 24701 GTTTGTAAAGGCTTTGGGCAAATTGTGCTTTGTAGACAAAACTGTAGAAGGGTCTGG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 41974 57 - 108979918 GTTTGTAAAGGCTTTGAGCAAATTGTGCTTGGTAGACAAAACTGTAGAAGGGTCTGG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61759707 57 - 96509753 GTTTTTAAAGGCTTTGAGCAAGTTGTGCTTTGTAGACCAAACTGTAGAAGGGTCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666886 57 + 11597128 GTTTTTAAAGGCTTTGAGCAAGTTGTGCTTTGTAAACCAAACTGTAGAAGGGTCTGG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174722 57 + 5626091 GTTTGTAAAGTCTTTGAGCAAGTTGTGCTTTGTAGACAAAACTGTAGAAGGGTCTGG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921522 57 - 107702431 GTTTATAAAGGCTTTGAGCAAGTTGTGCTTTGTAGACAAAACTGTAGAAGGGTCTGG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222139 57 + 521157 GTTTGTAAAGGCTTTGAGCAAGTTGTGCTTTGTAGACAAAACTGTAGAAGGGTCTGG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184091 56 + 1278784 GTTTGTAAAGGCTTTGAGCAAGTTGTGCTTTGTAGACAAAACTGTAGAAGGGTCT-G i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635320 57 - 108792865 GTTTGTAAAGGTTTTGAACAAGTTGACCTTTGTAGACAAAACTGTAGAAGAGTTTGA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2219342 57 - 3814455 GTTTGTAAAGGCTTAAAGCAAGTGGTATGTTATAGGCAAAACTACAAAGAGGCCTGA i saiBol1.JH378265 C 0 N 0 s cebCap1.NW_016107537v1 449837 57 + 3620821 GTTTGTAAAGGTTTTGAGCAAGTTGACCTTTGTAGACAAAACTGTAGAAGGGCCTGA i cebCap1.NW_016107537v1 I 65186 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1478321.000000 s hg38.chr14_KI270725v1_random 90103 244 + 172810 GTTTAAGCTTAGTGTCAGCGTGATGAGGACTAGAGGTCGCAGTGAGCTTGTGTTAAGAAATCCACCCTGCACTTCTGGCTTTGTCTCTTTCCTGGTTTTATAGGTGGTGGGTTCCTCTATGGAATGaacgtggctctgtggaaggaacatagttaaggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttacgc-----------aaatcagccatgtgctgtcatgaaca s panTro5.chrY 326550 244 + 26350515 GTTTAAGCTTAGTGTCAGCGTGATGAGGACTAGAGGTCGCAGTTAGCTTGTGTTAAGAAATCCACCCTGCAATTCTGGCTTTGTCTCTTTTCTGGTTTTATAGGTGATGGGTTCCTCTATGGAATGaacgtggctctgtggaaggaacatatttaaggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctgtcatgaaca i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 705 244 + 24701 CTTTAAGCTTAGTGTCAGCGTGATGAGGACTAGACGTCGCAGTGAGCTTGTGTTAAGAAATCCACCCTGCACTTCTGGCTTTGTCTCTTTTCTGGTTTTATAGGTGGTGGGTTCCTCTATGGAATGaacgtggctctgtggaaggaacatagttaaggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgt-----------aaatcagccatgtgctgtcatgaaca i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42031 244 - 108979918 GTTCAAGCTTAGTGTCAGCGTGATGGGGACTAGAGGTCGCAGTGAGCTTGTGTTAAGAACTCCGCCCTGCACTTCTGGTTTTGTCTAGTCTCTGGTATTATAGGTGGTGGGTTCCTCCATGGAATGaatgtggctctgtggaaggaacatagttaaggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctctcatgaaca i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61759764 244 - 96509753 GTTCAAGCTTAGTGTCAGCGTGATGGGAACTAGAATTCGCAGTGAGCTTGTGTTAAGAACTCCACCATGCATTTCTGGCTTTGTCTCTTCTCTGGTTTTATAGGCGGTGGGTTCCTCCATGGAATGaatgtggctctgtggaaggaacatagttgtggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctctcatgaaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 666943 244 + 11597128 GTTCAAGCTTAGTGTCAGCATGATGGGAACTAGAATTCGCAGTGAGCTTGTGTTAAGAACTCCACCATGCATTTCTGGCTTTGTCTCTTCTCTGGTTTTATAGGCGGTGGGTTCCTCCATGGAATGaatgtggctctgtggaaggaacatagttgtggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctctcatgaaca i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 174779 244 + 5626091 GTTCAAGCTTAGTGTCAGCGTGATGGGGACTAGAATTCGCAGTGAGCCTGTGTTAAGAACTCCACCATGCATTTCTGGCTTTGTCTCTTCTCTGGTTTTATAGGCGGTGGGTTCCTCTATGGAATGaatgtggctctgtggaaggaacatagttgtggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctctcatgaaca i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921579 244 - 107702431 GTTCAAGCTTAGTGTCAGCGTGATGGGGACTAGAATTCGCAGTGAGTTTGTGTTAAGAACTCCACCACGCATTTCTGGCTTTGCCTCTTCTCTAGTTTTATAGGTGGTGGGGTCCTCTATGGAATGaatgtggctctgtggaaggaacatagttaaggtcagacagacctagattccaagttcaccttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctctcatgaaca i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222196 244 + 521157 GTTCAAGCTTAGTGTCAGCGTGATGGGGACTAGAATTCGCAGTGAGCTTGTGTTAAGAACTCCACCATGCATTTCTGGCTTTGTCTCTTCTCTGGTTTTATAGGTGGTGGGTTCCTCTATGGAATGaatgtggctctgtggaaggaacatagttgtggtcagacagacctagattccaagttcagcttcaacaactgctgaccaagtgacttttatgc-----------aaatcagccatgtgctctcatgaaca i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184147 244 + 1278784 GTTTAAGCTTAGTGTCAGCGTGATGAGGACTAGAGGCTGCAGTGAGCATGGGTTAAGAAACACACCTTGCACTTCTGGCTTTGTCTCTTCTTGGGATTTTTAGGTTATGGGTTCCTCCATGGAATGaatatggctctgaggaaggaacatagttaaggtcagacagacctggattccaagttcagcttcaacaactgctgaccaagtgacttttaggc-----------aaatcagtcatgtgctctcatggaca i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635377 244 - 108792865 GTTTAAGCTGAGTGTCAGTGTGATGAGGAGCAGAGTTAGCATTGACCTTGTGTTAAGAAATCCACCCTGCATCTCTAGCTTTGTCTCATCTCTGGTTTTATAGGTTGTGGATTCCTCTATGGGATGaatgtggctctgtggaaggaacatagttaaggtcagacagtcctggattccaagttcagcttcaaaaactgctgatcaagtgacttttatgc-----------aaattagccatgtgctctcatgaaca i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2374987 204 - 3814455 GTTTAAGCTGAGTGTCAGCGTGATGACAAGCAGAGTTAGCATTGACCTTGTGTTAAGAAATCCACCCTGCATCTCTAGCTTTGTCTCATCTCTGGTTTTATAGGTTGTGGGTTCCTCCGTGGAATGAATGTGGCTCTGTGGAAGGAACATAGTTAAGGTCAGACAGTCCTAGATTCCAAGTTC---------------------------------------------------AGCCATGTGCTCTCATGAACA i saiBol1.JH378265 N 0 C 0 s cebCap1.NW_016107537v1 449894 255 + 3620821 GTTTAAGCTGAGTGTCGGCGTGATGAGGAGCAGAGGTAGCACTGACCTTGTGTTAAGAAATCCACCCTGCATCTCTAGCTTTGTCTCGTCTCTGGTTTTATAGGTTGTGGGTTCCTCTATGGAATGaatgtggctctgtggaaggagcatagttaaggtcaggaagtcctagattccaacttcagcttcaaaaactgctgatcaagtgacttttatgcaaatcagccataaatcagccatgtgctctcatgaaca i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=565308.000000 s hg38.chr14_KI270725v1_random 90347 80 + 172810 gtttcctcatgtgtgaaatggggCACTGAGGATGTGAAGGGGTGTCCTGAGGATTCCGCCAGCTGATGCACCATGAAGTG s panTro5.chrY 326794 80 + 26350515 gtttcctcatgtgtgaaatggggCACTGAGGATGTGAAGGGGTGTCCTGAGGGTTCCTCCAGCTGATGCACCATGAAGTG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 949 80 + 24701 gtttcctcatgtgtgaaatggggCACTGAGGATGTGAAGGGGTGTCCTGAGGGTTCCGCCAGCTGATGCACCATGAAGTG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42275 80 - 108979918 gtttcctcatgtgtgaaatggggCACTGAGGATATGAAAGGGTGTCCTGAGGGTTCCACCAGCTGATGCACCATGAAGTA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760008 79 - 96509753 gtttcctcctgtgtgtaatggggCACTGAGGGTATGAAAGGG-GTCCTGAGGGTTCCACCAGCTGACACACCATGAAGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 667187 79 + 11597128 gtttcctcctgtgtgtaatggggCACTGAGGGTATGAAAGGG-GTCCTGAGGGTTCCACCAGCTGACACACCATGAAGTG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 175023 79 + 5626091 gtttcctcctgtgtgtaatggggCACTGAGGGTATGAAAGGG-GTCCTGAGGGTTCCACCAGCTGACACACCATGAAGTA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90921823 80 - 107702431 ggttcctcatgtgtgaaatggggCACTGAGGATATGAAAGGGTGTCCTGAGGGTTCCACCAGCTGATGCACCATGAAGTG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222440 79 + 521157 gtttcctcatgtgtgtaatggggCACTGAGGGTATGAAAGGG-GTCCTGAGGGTTCCACCAGCTGACACACCATGAAGTG i manLeu1.NW_012101586v1 C 0 C 0 s nasLar1.chr13 22695535 80 - 126811233 gtttcctcatgtgtaaaatggggCACTGAGGATATGAAGGGGTGTCCTGAGGGTTCCACCAGCTGACGCACCATGAAGTG i nasLar1.chr13 N 0 I 1520 s colAng1.NW_012118465v1 184391 80 + 1278784 gttgtctcatgtgtgaaatggggCATTGAGGATATGAAGGAGTGTACTGAGGGTTCCACCAGCTGATGCACCATGAAGTG i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635621 80 - 108792865 gtttccttatgtgtgaaatggggaactgaggatataaaggggtgtcctgagggttgtaccagctgatgcaCCATGAGGTG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2375191 80 - 3814455 GTTTCCTTATGTGTGAAATGGGGCACTGAGGATATGAAGGGGTGTCCTGAGGGTTGTACAAGCTGATGCACCATGAGGTG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 450149 80 + 3620821 gtttcctcttgtgtgaaatggggCACTGTGGACAAGAAGTCGTGTCCTGAGGGTTGTACCAGCTGATGCACCATGAGCTG i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1003027.000000 s hg38.chr14_KI270725v1_random 90427 162 + 172810 TACATACATGTATAGACAGACACACACACATACAT------GAGAAGAGTATCTAGTGCCCCTTTTATGCATTCTTGAGTAACTCAGAATGTTATGTGAGATATTAACAGTCATATTTCATTTTCAACTAAAATTATCAATATTTATCTTATAACTAACAGATGCTTC s panTro5.chrY 326874 158 + 26350515 TACATACATGTATAGACAG----ACACACATACAT------GAGAAGCGTATCTAGTGCCCCTTTTATGCATTCTTGAGTAACTCAGAATGTTATGTGAGATATTAACAGTCATATCTCATTTTCAACTAAAATTATCAATATTTATCTTATAACTAACAGATGCTTC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1029 162 + 24701 TACATACATGTATAGACAGACACACACACATACAT------GAGAAGAGTATCTAGTGCCCCTTTTGTGCATTCTTGAGTAACTCAGAATGTTATGTGAGATATTGACAGTCATATGTCATTTTCGACTAAAATTATCAATATTTATCTTATAACTAACAGATGCTTC i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42355 166 - 108979918 AACATACATGTAGAGacagacacacacacacacacacacacGAGAAGAGTATCTAATGCCCCTTTTATGCATCCTTGAGTAACTCAGAATGTTATGTGAGATACTACCAGTC--ATGTCATTTTCAACTAAAATTATCAATATTCATCTTATAACTAAGAGATGCCTG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760087 158 - 96509753 AACATACATGTAGAGACAGACACACATACACACAC--------GAGGAGTATCTAATGCCCCTTTTATGCATCCTTGAGTAACTCAGAATGTTATGTGAGATACTACCAGTC--ACATCATTTTCAACTAAAATTATCAATATTTATCTTATAACTAAGAGTTGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 667266 158 + 11597128 AACATACATGTAGAGACAGACACACATACACACAC--------GAGGAGTATCTAATGCCCCTTTTATGCATCCTTGAGTAACTCAGAATGTTATGTGAGATACTACCAGTC--ACATCATTTTCAACTAAAATTATCAATATTTATCTTATAACTAAGAGTTGCCTC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 175102 164 + 5626091 Aacatacatatagagacagacacacacacacacac--acacGAGAAGAGTACCTGATGTCCCTTTTATGCATCCTTGAGTAACTCAGAACGTTATGTGAGATACTACCAGTC--ACATCATTTTCAACTAAAATTATCAATATTTATCTTATAACTAAGAGTTGCCTC i cerAty1.NW_012001187v1 C 0 I 1577 s chlSab2.chr14 90921903 162 - 107702431 AACATACATGTATAGacagacacacacacacacac----GCGAGAAGAGTATCTAATGCCCCTTTTATGCATCCTTGAGTAACTCAGAATGTTATGTGAGATACTACCAGTC--ATGTCATTTTCAACTAAAATTATCAATATTTATCTTATAACTAAGAGATGCCTC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222519 158 + 521157 AACATACATGTAGAGACAGACACACATACACACAC--------GAGGAGTATCTAATGCCCCTTTTATGCATCCTTGAGTAACTCAGAATGTTATGTGAGATACTACCAGTC--ATGTCATTTTCAACTAAAATTATCAATGTTTATCTTATAACTAAGAGATGCCTC i manLeu1.NW_012101586v1 C 0 C 0 s nasLar1.chr13 22697135 166 - 126811233 CACATACATGTATAGACAGACACACACACACACGT--ACATGAGAAGAGTATCTAGTGCTCCTTTTGTGGATCCTTGAATAACTCAGAATGTTGTGTCAGATATTACTAGTCATATGTCATTTTCAACTAAAATTATCAATATTTGTCTTGTAACTAAGAGATGCCTC i nasLar1.chr13 I 1520 C 0 s colAng1.NW_012118465v1 184471 156 + 1278784 AACATACATGTGTAGACAGACATAC------------ACATGAGAAGAGTATCTAGTGCCCCTTTCATGCATCCTTGAGTAACTCAGAATGTTATGTCAGGTATTACCAGTCATATGTCATTTTCAGCTAAAATTATCAATATTTGTCTTATAACTAACAGATGGCTC i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635701 161 - 108792865 CACATACATCTATAGATGAACACACTCACATACTT------GAGAAGAGAATCTAATGCACATTTTATGCATCCTTGAATAACTCAGAATGTTGTGTGAGATATTACTAGTCACATATCA-TTTCAACCAAAATTATTCATATTTATCTTATAATTAGCAGATGCCTC i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2375271 152 - 3814455 TACATACATGTATAG----ACACACACACATACAT------GAGAAGAGAATCTAATGCACCTTTTATGCTGCCTTGAATAACTCAGAATGTTATGTGAGATATTACTAGTCATATATCA-TTTCAACTACATTTGTCCATAT-----TTATAACTAACAGATGCCTC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 450229 161 + 3620821 TACATACATCTATAGATAGACACACGCACATACAT------GAGAAGAGAATCTAATGCACTTTTTATGCTGCCTTGAATAACTCAGAATGTTATGTGAAATATTACTAGTCACATATCA-TTTCAACTAAAATTATCTATATTTATCTTATAACTAGCAGATGCCTC i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=265381.000000 s hg38.chr14_KI270725v1_random 90589 37 + 172810 TCTGTACACTGTAGGTTTCATGTGCACTTCTTCAATC s panTro5.chrY 327032 37 + 26350515 TCTGTACACTGTAGGTTTCATGTACATTTCTTCAATC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1191 37 + 24701 TCTGTACACTGTAGGTTTCATGTACATTTCTTCAACC i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42521 37 - 108979918 TCTGTACACTGTAGGTTTCATGTACATTTCTTCAATC i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760245 37 - 96509753 TCCGTACACTGTAGGTTTCATGTGCATTTCTTCAATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 667424 37 + 11597128 TCCGTACACTGTAGGTTTCATGTGCATTTCTTCAATC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 176843 37 + 5626091 TCTGTACACTGTAGGTTTCATGTGCATTTCTTCAATC i cerAty1.NW_012001187v1 I 1577 C 0 s chlSab2.chr14 90922065 37 - 107702431 TCTGTACACTGTAGGTTTCATGTGCATTTCTTCAATC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 222677 37 + 521157 TCTGTACACTGTAGGTTTCATGTGCATTTCTTCAATC i manLeu1.NW_012101586v1 C 0 C 0 s nasLar1.chr13 22697301 37 - 126811233 TCTGTACACTGTAGGTTTCATGTACATTTCTTCAATC i nasLar1.chr13 C 0 N 0 s colAng1.NW_012118465v1 184627 36 + 1278784 TCTGTACACTGTA-GTTTCATGTACCTTTCTTTAATC i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90635862 37 - 108792865 TCTGTACAGTATAGTATTTATGTAAATTTCTTCAATC i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2375423 37 - 3814455 TCTGTACACTGTAGAATTTATGTATATTTCTTCAATC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 450390 37 + 3620821 TCTGTACACCGTAGTATTTATGTACATTTCTTCAATC i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1190687.000000 s hg38.chr14_KI270725v1_random 90626 197 + 172810 ACAAAATTTTTCACCAATCTATTTATGTCTAGTATCAGAAAATTAAGCAAGGAGATTG-CAAACCAACACAACACCTTTAGTCTGGATTTTCCCGGAGCCCCATTtgtgttagtgtccttgggctactgtaacaagttctcaaaaat-gtggtagcttcaaacaacaggaatggaatctctcatagtt--------cagaagtccag s panTro5.chrY 327069 197 + 26350515 ACAAAATTTTTCACCAATCTATTTATGTCTAGTATCAGAAAGTTAAGCAAGGAGATTG-CAAACCAACACAATATTTTTAGTCTGGATTTTCCCGGAGCCTCATTtgtgttagtgtccgcgggctactgtaaaaagttctcataaat-gtggtagcttcaaacaacaggaatggaatctctcatagtt--------cagaagtccag i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1228 197 + 24701 ACAAAATTTTTCACCAATCTATTTATGTCTAGTATCAGAAAGTTAAGCAAGGAGATTG-CAAACCAACACAACACCTTTAGTCTGGATTTTCCCGGAGCCCCATTtgtgttagtgtcctcgggctactgtaacaagttctcaaaaat-gtggtagcttcaaacaacaggaatggaatctctcatagtt--------cagaagtccag i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42558 206 - 108979918 ACAAAATTTTTCACCAATCTATTTATGTCTGATATCAGAAAGTTAAGCAAGGAGATTGAAAAACCACCACAGCACCTGTAGTCTGGATTTTCCCAGAGCCCCATTtgtgttagtgtccttgggctactgtaacaagttctcaaaaat-gtggtagcttcaaacaacaggaatggaatctctcatagttctggagaccagaaatccag i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61760282 206 - 96509753 ACAAAATTTTTCACCAATCTATTTATGTCTAATATCAGAAAGTTAAGCAAGGAGATTGAAAAACCACCACAGCACCTGTAGTCTGGATTTTCCCGGAGCCCCATTtgtgttagtgtccttgggctactgtaacaagttctcaaaaat-gtggtagcttcaaacaacaggaatggaatcactcatagttctggagaccagaagtccag i macFas5.chr10 C 0 I 1 s macNem1.NW_012014799v1 667461 206 + 11597128 ACAGAATTTTTCACCAATCTATTTATGTCTAATATCAGAAAGTTAAGCAAGGAGATTGAAAAACCACCACAGCACCTGTAGTCTGGATTTTCCCGGAGCCCCATTtgtgttagtgtccttgggctactgtaacaagttctcaaaaat-gtggtagcttcaaacaacaggaatggaatcactcatagttctggagaccagaagtccag i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 176880 205 + 5626091 ACAAAATTTTTCACCAATCTATTTATGTCTAATATCAGAAAGTTAAGCAAGGAGATTG-CAAACCAACACAGCACCTTTCGTCTGGATTTTCCTGGAGCCCCATTtgtgttagtgtcctcgggctactgtaacaagttctcaaaaat-gtggtagcttcaagcaacaggaatggaatcactcatagttctggagaccagaagtccag i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 90922102 205 - 107702431 ACTAAATTTTTCACCAATCTATTTATGTCTAATATCAGAAAGTTAAGCAAGGAGATTGAAAAACCACCACAGCACTTGTAGTCTGGATTTTCCCGGAGCCCCATTtgtgttagtgtcctcgagttactgtaacaag-tctcaaaaat-gtggtagcttcaaacaacaggaatggaatcactcatagttctggagaccagaagtccag i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 222714 206 + 521157 ACAAAATTTTTCACCAATCTATTTATGTCTAATATCAGAAAGTTAAGCAAGGAGATTGAAAAACCACCACAGCACCTGTAGTCTGGATTTTCCCAGAACCCCATTtgtgttagtgtccttgggctcctgtaacaagttctcaaaaat-gtggtagcttcaaacaacaggaatggaatctctcatagttctgaagaccagaagtccag i manLeu1.NW_012101586v1 C 0 I 1 s colAng1.NW_012118465v1 184663 205 + 1278784 ACAAAATTTTCCACCAATGTATTTATGTGTAATGTCAGTAAGTTAAGCAAGGAGATTT-CAAACCACCACAGCACATTTAGTCTGCATTTTCCCAGAGCCCCATTtgtgttagtgtcctcgggctactgtaacaagttctcaaaaat-gtggtagcttaaaacaacaggaatggaatctctcacggttctggagaccagaagtccag i colAng1.NW_012118465v1 C 0 I 1 s calJac3.chr14 90635899 202 - 108792865 ACAAAATTTTCCACCAATCTATTTATTTCTAGTATTAGAAATTTAAGGAAGGAGATTG-CAAATCAACAAAGCACCTTTAGTGT-GATTTTCCCTAAGCCCCATTtgtgttagtgtcctgggg-tactgtaacaagttctcaaaaac--tgatagcttaaaagaacaggaatagcatctctcatagctctggagaccagaagtccag i calJac3.chr14 C 0 I 1 s saiBol1.JH378265 2375460 204 - 3814455 ACAAAATTTTCCACCAATCTATTTATTTCTAGTATTAGAAATTTAAGGAAGGCCATTG-CAAATCAACAAAGCACCTTTAGTCTAGGTTTTCCCTAAG-CCCATTtgtgttagtgtcctaggg-tactgtaacaagttctcaaaaaatgtgatagcttaaaacaacagaaatagcatctctcatagctctggagaccagaaatccag i saiBol1.JH378265 C 0 I 1 s cebCap1.NW_016107537v1 450427 205 + 3620821 ACAAAATTTTCCACCAATCTATTTATTTCTAGTATTAGAAATTTAAGGAAGGAGATTG-CAAATCAACAAAGCACCTTTAGTCTAGATTTTCCCTAAGCCCCATTtatgttagtgtcctgggg-tactgtaacaagttctcaaaaactgtgatagctcaaaacaacaggaatagcatctctcatagctctggagaccagaagtccag i cebCap1.NW_016107537v1 C 0 I 1 e ponAbe2.chrUn 2094174 6207 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=8281.000000 s hg38.chr14_KI270725v1_random 90823 1 + 172810 a s panTro5.chrY 327266 1 + 26350515 a i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1425 1 + 24701 a i gorGor5.CYUI01005671v1 C 0 C 0 s ponAbe2.chrUn 2100381 1 + 72422247 a i ponAbe2.chrUn I 6207 I 1012 s rheMac8.chr13 42765 1 - 108979918 a i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61760489 1 - 96509753 a i macFas5.chr10 I 1 C 0 s macNem1.NW_012014799v1 667668 1 + 11597128 a i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 177086 1 + 5626091 a i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90922308 1 - 107702431 a i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 222921 1 + 521157 a i manLeu1.NW_012101586v1 I 1 C 0 s colAng1.NW_012118465v1 184869 1 + 1278784 a i colAng1.NW_012118465v1 I 1 C 0 s calJac3.chr14 90636102 1 - 108792865 a i calJac3.chr14 I 1 C 0 s saiBol1.JH378265 2375665 1 - 3814455 a i saiBol1.JH378265 I 1 C 0 s cebCap1.NW_016107537v1 450633 1 + 3620821 a i cebCap1.NW_016107537v1 I 1 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=98405.000000 s hg38.chr14_KI270725v1_random 90824 15 + 172810 tcagtttcactgggc s panTro5.chrY 327267 15 + 26350515 tcagtttcactgggc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1426 15 + 24701 tcagtttcactgggc i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42766 15 - 108979918 tcagtttcactgggc i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760490 15 - 96509753 tcagtttcactgggc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 667669 15 + 11597128 tcagtttcactgggc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177087 15 + 5626091 tcagtttcgctggta i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90922309 15 - 107702431 tcagtttcactgggc i chlSab2.chr14 C 0 I 971 s manLeu1.NW_012101586v1 222922 15 + 521157 tcagtttcactgggc i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184870 15 + 1278784 tcagtttcgctggta i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90636103 15 - 108792865 tcagtttcactgggc i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2375666 15 - 3814455 tcagtttcactgggc i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 450634 15 + 3620821 tcaatttcactgggc i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=27184.000000 s hg38.chr14_KI270725v1_random 90839 5 + 172810 taaga s panTro5.chrY 327282 5 + 26350515 taaga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1441 5 + 24701 taaga i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42781 5 - 108979918 taaga i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760505 5 - 96509753 taaga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 667684 5 + 11597128 taaga i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177102 5 + 5626091 taagg i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923295 5 - 107702431 taagg i chlSab2.chr14 I 971 C 0 s manLeu1.NW_012101586v1 222937 5 + 521157 taaga i manLeu1.NW_012101586v1 C 0 I 973 s colAng1.NW_012118465v1 184885 5 + 1278784 taaca i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90636118 5 - 108792865 tgaga i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2375681 5 - 3814455 tgaga i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 450649 5 + 3620821 tgaga i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=173382.000000 s hg38.chr14_KI270725v1_random 90844 30 + 172810 tcttggagtcatcagttctggctccttctg s panTro5.chrY 327287 30 + 26350515 tcttggagtcataagttctggctccttctg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1446 30 + 24701 tcttggagtcatcagttctggctccttctg i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42786 30 - 108979918 tcttggagacatcggttctagccccttcag i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760510 30 - 96509753 tcttggagacatcggttctagccccttcag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 667689 30 + 11597128 tcttggagacatcggttctagccccttcag i macNem1.NW_012014799v1 C 0 I 977 s cerAty1.NW_012001187v1 177107 30 + 5626091 tcttggagtcgtcaggtctatctccttcag i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923300 30 - 107702431 tcttggagtcgtcaggtctagctccttcag i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 223915 30 + 521157 tcttggagtcgtcaggtctagctccttcag i manLeu1.NW_012101586v1 I 973 C 0 s colAng1.NW_012118465v1 184890 30 + 1278784 tcttgaagtcatcaggtctagctccttcag i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90636123 30 - 108792865 tcttggagtcatcaagtctggctccttcag i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2375686 30 - 3814455 tcttggagttatcaagtctggctccttcag i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 450654 30 + 3620821 tcttggagtcatcaagtctggctccttcag i cebCap1.NW_016107537v1 C 0 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=318968.000000 s hg38.chr14_KI270725v1_random 90874 49 + 172810 aagctctagggagcagtctgatttagctcttccagcttctggtggcttc s panTro5.chrY 327317 49 + 26350515 aagctctagggagcagtctgatttagcttttccagcttctggtggcttc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1476 49 + 24701 aagctctagggagcagtctgatttagctcttccagcttctggtggcttc i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42816 49 - 108979918 aagctctaggaaggagtctgatttagctctttcagcttctggtggctcc i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61760540 49 - 96509753 aagctctaggaaggagtctgatttagctctttcagcttctggtggcttc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 668696 49 + 11597128 aagctctagggagcagtctgatttaactcttccagcttctggtggcttc i macNem1.NW_012014799v1 I 977 C 0 s cerAty1.NW_012001187v1 177137 49 + 5626091 aagctctagggagcagtctgatttagctcttccatcttctggtggcttc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923330 49 - 107702431 aagctctagggagcagtctgatttaactcttccagcttctggtggcttc i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 223945 49 + 521157 aagctctagggagcagtctgatttaactcttccagcttctggtggcttc i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184920 49 + 1278784 aagctctagagaggagtgggatttagctcttccagcttctggtggcttc i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90636153 49 - 108792865 aagctctagggaggagtctgatttagttcttccaacttccagtggcTTC i calJac3.chr14 C 0 I 926 s saiBol1.JH378265 2375716 49 - 3814455 aagctctagggaggagtctgatttagctcttccagcttccagtggcttc i saiBol1.JH378265 C 0 I 932 s cebCap1.NW_016107537v1 450684 49 + 3620821 aagctctaggggggagtctgatttagttcttccagctcccagtggcTTC i cebCap1.NW_016107537v1 C 0 I 914 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=-1701.000000 s hg38.chr14_KI270725v1_random 90923 1 + 172810 t s panTro5.chrY 327366 1 + 26350515 t i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1525 1 + 24701 t i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42865 1 - 108979918 a i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61760589 1 - 96509753 a i macFas5.chr10 C 0 I 973 s macNem1.NW_012014799v1 668745 1 + 11597128 c i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 177186 1 + 5626091 c i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 90923379 1 - 107702431 c i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 223994 1 + 521157 c i manLeu1.NW_012101586v1 C 0 I 1 s colAng1.NW_012118465v1 184969 1 + 1278784 a i colAng1.NW_012118465v1 C 0 I 1 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2375765 932 - 3814455 I e cebCap1.NW_016107537v1 450733 914 + 3620821 I e calJac3.chr14 90636202 926 - 108792865 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=7497.000000 s hg38.chr14_KI270725v1_random 90924 2 + 172810 ct s panTro5.chrY 327367 2 + 26350515 cc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1526 2 + 24701 ct i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42867 2 - 108979918 ct i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61761563 2 - 96509753 ct i macFas5.chr10 I 973 C 0 s macNem1.NW_012014799v1 668747 2 + 11597128 ct i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 177188 2 + 5626091 ct i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90923381 2 - 107702431 ct i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 223996 2 + 521157 ct i manLeu1.NW_012101586v1 I 1 C 0 s colAng1.NW_012118465v1 184971 2 + 1278784 ct i colAng1.NW_012118465v1 I 1 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2375765 932 - 3814455 I e cebCap1.NW_016107537v1 450733 914 + 3620821 I e calJac3.chr14 90636202 926 - 108792865 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=38377.000000 s hg38.chr14_KI270725v1_random 90926 9 + 172810 ctcccggaa s panTro5.chrY 327369 9 + 26350515 ctcccggga i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1528 9 + 24701 ctcccggga i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42869 9 - 108979918 ctccttgga i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61761565 9 - 96509753 ctccttggc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 668749 9 + 11597128 ctccttggc i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177190 9 + 5626091 ctccttggc i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923383 9 - 107702431 ctccttgac i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 223998 9 + 521157 ctccttgac i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184973 9 + 1278784 ctccttggc i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637128 9 - 108792865 CTCCTTGGC i calJac3.chr14 I 926 C 0 s saiBol1.JH378265 2376697 9 - 3814455 CTCCTTGGC i saiBol1.JH378265 I 932 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e cebCap1.NW_016107537v1 450733 914 + 3620821 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=493140.000000 s hg38.chr14_KI270725v1_random 90935 85 + 172810 tgtggacacatcactgcaatctctgtctctgtgttcacattgccttctccACTTCAGTCTATGCTAAATGTCTCTCTACCTCTT-G s panTro5.chrY 327378 85 + 26350515 tgtgtatacatcactgcaatctctgtctctgtgttcatattgccttctccacttcagtctatgctaaatgtctctctacctctt-g i panTro5.chrY C 0 I 1 s gorGor5.CYUI01005671v1 1537 85 + 24701 tgtggacacatcactgcaatctctgtctctgtgttcacattgccttctccacttcagtctatgctaaatgtctctctacctctt-g i gorGor5.CYUI01005671v1 C 0 I 1 s rheMac8.chr13 42878 84 - 108979918 tgtggacacattattgccatgtctatctctgtgttcagattgccttcttctcttcagtctatggtaaatgtctctctacctctt-- i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61761574 85 - 96509753 tgtggacacatcactgcgatctctgtctctgtgttcacattgccttctcctcttcagtctatggtaagtgtctctctacctctt-g i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 668758 85 + 11597128 tgtggacacatcactgcgatctctgtctctgtgttcacattgccgtctcctcttcagtctatggtaagtgtctctctacctctt-g i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177199 85 + 5626091 tgtggacacatcaccgcgatctctgtctctgtgttcacattgccttctcctcttcagtctatggtaagtgtctctctacctctt-g i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923392 85 - 107702431 tgtggacacatcactgcaatctctgtctctgtattcacattgcgttctcctcttcagtctatggtaagtgtctctctacctctt-g i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224007 85 + 521157 tgtggacacatcactgcgatctctgtctctgtgttcacattgccttctcctcttcagtctatagtaagtgtctctctacctctt-g i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 184982 81 + 1278784 tgtggacacatcactgcagtctctgtctctg--ttcacattgccttctcttcttcagtctatggtaagtgcctctctgcctct--- i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637137 84 - 108792865 TGTGGTCAcatcactgcaatctctgactctgtgttcaaactgccttctcctcttcagtttatgttaagtgtctctctacgtctt-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2376706 84 - 3814455 TGTGGTCAcatcactgcaatctctgactctgtgttcacattgccttctcctcttcagtttatgttaagtgtccctctatgtctt-- i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 451647 85 + 3620821 tgtggtcacatcactgcaatctctgactctgtgttcacattgccttccccacttcggtttatgttaagtgtctctctatgtcttt- i cebCap1.NW_016107537v1 I 914 T 65132 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1915.000000 s hg38.chr14_KI270725v1_random 91020 1 + 172810 G s panTro5.chrY 327464 1 + 26350515 g i panTro5.chrY I 1 C 0 s gorGor5.CYUI01005671v1 1623 1 + 24701 t i gorGor5.CYUI01005671v1 I 1 C 0 s rheMac8.chr13 42962 1 - 108979918 t i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61761659 1 - 96509753 t i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 668843 1 + 11597128 t i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177284 1 + 5626091 t i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923477 1 - 107702431 t i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224092 1 + 521157 t i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 185063 1 + 1278784 t i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637221 1 - 108792865 t i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2376790 1 - 3814455 t i saiBol1.JH378265 C 0 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e cebCap1.NW_016107537v1 451732 65132 + 3620821 T e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=317978.000000 s hg38.chr14_KI270725v1_random 91021 61 + 172810 TTTTTTTAGGACACTTGAGTTTGCATTTAAGTCCCAGTTGATTAATCTAAGAATATCTCCC s panTro5.chrY 327465 61 + 26350515 ttttttttggacacttgagtttccatttaagtcccagttgattaagctaagaccatctccc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1624 61 + 24701 tttttttaggacacttgaatttgcatttaagtcccagttgattaatctaagaatatctccc i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 42963 61 - 108979918 ttttctcaggacacttgtgttcgcatttagggcccacttgattaatctaacatcatctacc i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61761660 61 - 96509753 ttttctcaggacacttgtgttcgcatttaaggcccagttgattaatctaagatcatctcct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 668844 61 + 11597128 ttttctcaggacacttgtgttcgcatttaaggcccagttgattaatctaagatcatctcct i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177285 61 + 5626091 ttttctcaggacacttgtgttcgcatttaaggcccagttgattaatctaagatcatctcct i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923478 61 - 107702431 ttttctcaggacacttgtgttcgcatttaaggcccagttgatttatctaagatcatctcct i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224093 61 + 521157 ttttctcaggacacttgtgttcgcatgtaaggcctagctgattaatctaagatcatctcct i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 185064 61 + 1278784 ttttctcaggacacttgtgatcgcatttagggcccacttgattaacctaaaatgatctctc i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637222 56 - 108792865 ttttctcaggacacttgtgatcacatttagggcccacttga-----ttaagatcatctctc i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2376791 56 - 3814455 ttttctcaggacacgtgtgatcacatttagggcccactcga-----ttaagatcatctctc i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 386600 61 + 3620821 ttttctcaggacacttgtgatcgcatttggggtccacttgattagcttaagattatctgcc i cebCap1.NW_016107537v1 T 65132 I 65125 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=758186.000000 s hg38.chr14_KI270725v1_random 91082 128 + 172810 TGTTTCAAGCTCCTTAATTTACACCTGCAAAAGCTGTTTTCCCAAATGAGATACATGCATAATCTTCTTG----GAATGAAACCTCACTATTTGGGGATGATACTCAGTACTACACCATTACATAACCAGGT s panTro5.chrY 327526 128 + 26350515 tctttcaagctccttaatatacacctgcaaaagctgttttcccaaatgagatacatgcatagTCTTCTTG----GAATGAAACTTCACTATTTGGGGATGATACTCAGTACTACACCATTACATAACCAGGT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1685 128 + 24701 tgtttcaagctccttaatttacacctgcaaaagctgttttcccaaatgagatacatgcatagTCTTCCTG----GAATGAAACCTCACTATTTGGGGATGATACTCAGTACTACACCATTACATAACCAGGT i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 43024 128 - 108979918 tgtttcaagttccttaatttatacctgcaaaagcccatttcccaAATCGGATACAAGCATATGCTTCTTG----GAATGAAACCTCACTATTTGGGGATGATACTCAGTACTACACCATCATAGATCAAGGT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61761721 128 - 96509753 tgtttcaagctccttaatttacacctgcaaaagcccttttcccaaataaaatacatgcatattcTTCTTG----GAATGAAACCTCACTCTTTGGGGATGATACTCAGTACTACATGATTACAGAAACACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 668905 128 + 11597128 tgtttcaagctccttaatttacacctgcaaaagcccttttcccaaataaaatacatgcataTTCTTCTTG----GAATGAAACCTCACTCTTTGGGGATGATACTCAGTACTACATGATTACAGAAACACTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177346 127 + 5626091 tgtttcaagctccttaatttacacctgcaaaagcccttttctcaaaaaaaatacatGTATATTCTTCTTG----GAATGAAACCTCACTCTTT-GGGATGATACTCAGTACTACATCATTACAGAAACAGTT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923539 128 - 107702431 tgtttcaagctccttaatttacacctgcaaaagcccttttcccaaataaaatacatgcatattcTTCTTG----TAATGAAACCTCACTCTTTGGGGATGATACTCAGTACTGCATCATTACAGAAATAGTT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224154 128 + 521157 tgtttcaagctccttaatttacacctgcaaaagcccttttcccaaaaaaaatacatatatattcttcttg----gaatgaaacctcactctttggggATGATACTCAGTACTACGTCATTACAGAAACAGTT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 185125 128 + 1278784 tgtttcaagctccctaatttacacttgcaattgcccttttcccaaataagatacatgcataggcttcttg----gaatGAAACCTCATTATTTGGGGATGATACTCAATACTACACCATTACAGAACCAGGT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637278 132 - 108792865 tgtttcaagctccttaatttatacctgcaaaagcccttttcccaaataagataCATGCATAGCCTTCTTGAAATGAATGAAACCTCATTATTTGGGGATGATACTCGGTACTACACCATTATAGAACCAGGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2376847 128 - 3814455 tgtttcaagctccttaatttatacctgcaaaagcccttttcccaaataagataCATGCATAGCCTTCTTG----GAATGAAACCTCATTATTTGGGGATTATACTTGGTACTACACCATTATAGAATGAGGT i saiBol1.JH378265 C 0 T 63795 s cebCap1.NW_016107537v1 451786 128 + 3620821 tgtttcaagctccctagtttatacctgcaaaagcccttttcccaaataagatgcatgcatagCCTTCTTG----GAATGAAACCTCATTATAGGGGAATGATACTCGGTACTACACCATTATAGAACCAGGT i cebCap1.NW_016107537v1 I 65125 C 0 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=2913575.000000 s hg38.chr14_KI270725v1_random 91210 529 + 172810 CTCAGTGTTAGTCCAGTACATACATCACAA--------------------------------------tct--ctctctctctctctctcCATACACCCTGGCTTCCTCCTTTTCTCAATGTCATAAATCTCTTCAATTCCTTAAGTGTATCCAGTGATACCtataaacaaataagtatctgagaaaagtctcaatcagtttagaaatttatttggtcaaagttaaagaaatatcagtgaaacagcctcaggaggtcttgagaacgtgtgtcaaaggtcgtcgggctacaggttggtttcacacgttttagggagacacaagat-atcaatcaatacgtgtaagctgtacattgctttgatatggaaaggcaggacagcccgaaggaggggggatgttggggacttccaggtcataggtggattcagagatttcataggtggttgaaagcgtttatctaatgacctgtaatcaacacaagggagtttctgggtttagaaaaagggttttggagccaaggttgcatcatgcagatgaagcctccaggtagcaggcttcagagagaatagat s panTro5.chrY 327654 551 + 26350515 CTCAGTGTTAGTCCTGTACATACATCATAA--------------tctctctctctctctctctctctctct--ctctctctctctctctcCACACACCCTGCCTTCCTCCTTTTCTCAATGTCATAAATCTCTTCAATTCCTTAAGTGTATCCAGTGATACCTACAAACAAATaagtatctgagaaaagtctcaatcagtttagaaatttatttggtcaaagttaaagaaatatcagtgaaacagcctcaggaggtcttgagaac--gtgtcaaaggttgtcaggctacaggttggttttacacgttttagggagacataagat-atcaatcaatacgtgtaagctgtacattgctttgatatggaaagacaggacagccggaaggaggggggatgttggggacttccaggtcataggtggattcaaagatttcataggtggttgaaagagtttatctaatgacctgtaatcaacacaagggagtttctgcgtttcgaaaaagggttttggagccaaggttgtgtcatgcagatgaagtttccaggtagcaggcttcagagagaatagat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 1813 539 + 24701 CTCAGTGTTAGTCCTGTACATACATCACAA----------------------------tctctctgtcttt--ctctctctctctctctcCACACACCCTGGCTTCCTCCTTTTCTCAATGTCATAAATCTCTTCAATTCCTTAAGTGTATCCAGTGATATCtataaacaaataagtatctgagaaaagtctcaatcagtttggaaatttatttggtcaaagttaaagaaatatcagtgaaacagcctcaggaggtcttgagaatgtgtgtcaaaggtcgtcgggctacaagttggttttacacgttttagggagacataagat-atcaatcaatacgtgtaagctgtacattgctttgatatggaaaggcaggacagcccgaaggaggggggatgttggggacttccaggtcataggtggattcagagacttcataggtggtggaaagcgtttatctaatgacctgtaatcaacacaagggagtttctgggtttagaaaaagggttttggagccaaggttgcatcatgcagatgaagcctccaggtagcaggcttcagagagaatagat i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 43152 542 - 108979918 CTCAGTTTTAGTCCTATACACACA----------------------TCACAAGCTCAAACCCTCTCTCTCA------TTCTCTCTCTCCCCACACATCTTGTCTTCCTCATTTTCTCAAGGTCATAAATCTCTTCACTTCCTTAAGTGTATACAGTGATACCtataaacaaataagtatctgagaaaagtctcaatcaatttagaaatttatttggtcaaagttaaagacatataagtgaaacagcctcagaaggtcttgagaacgtgtgcccaaggtggtcgggctacagcttgattttacacattttagggagacataagataatcaatcaatatgtgtaagctgtacattggtttgatatggaaaggcaggacagcccgaaggagggggcgtgttggggacttccaggtcataggtggattcgaagatttcatagacagtggaaagagtttatctaatgacctgtaatcaacagaacggagtttctgggtctaaaaaaagggttttggagccaacgtttcatcatgaagatgaagtctccagggagcaggcttcagcaagaatagat i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61761849 550 - 96509753 CTCAGGGTTAGTCCTGTACAAACA------------------tctctctctctctctctctctctctctcactctgtctctctctctctcCACACATCTTGGCTTCCTCCTTTTCTCATTGTCATAAATCTCTTCACATCCTTAAGTGTGTCCAGTGATACCCACAAATAAACaagtatctgagacaagtcacattcattttagaaatttatttggtcaaagttaaagacatatcagtgaaatagcctcagaaggtcttaagaatgtgtgcccaagatggtcgggctacagcttggttttacatgtcttagggagacataagat-atcaatcaatatgtgtaagctgtacattgctttgctatggaaaggctgaacagcccgaaggagggggcgtgttggggacttccgggtcataggtggattcaaagatttcataaa-agaggaaagagtttatctaatgacctgtaatcaacagaagggagtttctaggtttagaaaaagggtcgtggagccaaggtttcatcatgaagatgaagcccccaggtagcaggcttcagagagaatagat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 669033 562 + 11597128 CTCAGGGTTAGTCCTGTACAAACAtc------tctctctctctctctctctctctctctctctctctctcactctgtctctctctctctcCACACATCTTGGCTTCCTCCTTTTCTCATTGTCATAAATCTCTTCACATCCTTAAGTGTGTCCAGTGATACCCACAAATAAACaagtatctgagacaagtcacattcattttagaaatttatttggtcaaagttaaagacgtatcagtgaaatagcctcagaaggtcttaagaacgtgtgcccaagatggtcgggctacagcttggttttacatgtcttagggagacataagat-atcaatcaatatgtgtaagctgtacattgctttgctatggaaaggctgaacagcccgaaggagggggcgtgttggggacttccgggtcataggtggattcaaagatttcataaa-ggaggaaagagtttatctaatgacctgtaatcaacagaagggagtttctaggtttagaaaaatggttgtggagccaaggtttcatcatgaagatgaagcccccaggtagcaggcttcagagagaatagat i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177473 522 + 5626091 CTCAGTGTTAGTCCTGTACAAACA--------------------------------------------TCA--CTATCTCTCTCTCTCTCCACACATCTTGGCTTCCTCCTTTTCTCAATGTCATAAATCTCTTCATATCCTTAAGTGTGTCCAATGATACCCACAAATAAACaagtatctgagacaagtcacattcattttagaaatctatttagtcaaagttaaagacatatcagtgaaacaacctcaggatgtcttgagaatgtgtgcccaaggtggtcgggctacagtttggttttatacattttcgggagacataagat-gtcaatcaatatgtgtaagctgtacattgctttgatatggaaaggcaggacagcccgaaggagggggcgtgttggggacttccgggtcataggtggattcaaagatttcataaa-ggaggaaagagtttatctaatgacctgttatcaacagaagggagtttctaagtttagaaaaatggttgtggagcccagttttcatcatgaagatgaagcccccaggtagcaggcttcagagagaatagat i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90923667 548 - 107702431 CTCAGTGTTAGTCCTGTACAAACA----------------tctctctctctctctctctctctctctctct--ctctctctctctctctcCACACATCTTGGCTTCCTCCTTTTCTCAATGTCACAAATCTCTTCACATCCTTAAGTGTGTCCGGTGATACCCAtaaataaacaagtatctgagacaagtcacattcattttagaaatttatttggtcaaagttaaagacatatcagtgaaacagtctcagaaggtctcaagaatgtgtgcccaaggtggtcgggctacagcttgattttacacattttagggagacataagat-atcaatcaatatgtgtaagctgtacattgctttgatatggaaaggcaggacagcccgaaggagggggcgtgttggggacttccaggtcatagttggattcaaagatttcataaa-agaggaaagagtttatctaatgacctgtaatcaacaaaagggagtttctaggtttagaaaa--gggtggtgagccaaggtttcatcatgaagatgaagcccccaggtagcaggcttcagagagagtagat i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224282 520 + 521157 CTCAGTGTTAGTCCTGTACAAACA--------------------------------------------TCA--CTATCTCTCTCTCTCTCCACACATCTTGGCTTCCTCCTTTTCTCAATGTCATAAATCTCTTCACATCCTTAAGTGTGTCCAGTGATACCCACaaataaacaagtatctgagacaagtcacattcattttagaaatctatttggtc--agttaaagacgtatgagtgaaacaacctcaggatgtcttgagaatgtgtgcccaaggtggttgggctacagcttggttttacacattttcgggagacataagat-gtcaatcaatatgtgtaagctgtacattgctttgatatggaaaggcaggacagcccgaaggagggggcgtgttgcggacttccgggtcataggtggattcaaagatttcataaa-ggaggaaagagtttatctaatgacctgtaatcaacagaagggagtttctaggtttagaaaaatggttgtggagccaaggtttcattatgaagatgaagcccccaggtagcaggcttcagagagaatagat i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 185253 557 + 1278784 CTCAGTGTTAGTCCTGTACATACATCAGTAGTActctctctctctctcacacacacacacacacacactctctctctctctctctctcACCACACATCCTGGTTTCCTTCTTTTCTCAATATCAAAAATCTCTTCACTTCTCTAAGTGTATCCAGTGGCAGCtgtaaactagtatgtatctgagacaagtctcaataaatttagaaatgtatttggtcaaagttaaagacatataagtgaaacagcctcaagaggtcttcagaatgtgtgcccaaggtggtcgggctacagcttggttttacacattttagggagacataagat-gtcagtcaatatgtgtaagctgtacattggtttgatatggaacggcaggacagcccaaaggaggggggttgttgaggacttccaggtcataggtggattcaaagattccata---ggcaga--------atctagtgacctgtaatcaacagaagggagtttctgggttaagaaaaaaagttgtggaaccaaggttt-atcatgcagatgaagccttcaggtagcagactttagagagaataggc i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637410 532 - 108792865 CTCATTGTTAGTACTGTACATACCTCACAG----------------------------tctccctctctct--ttctctctctctctctcCCCACATCCCAGATTCCTCCTTTTCTCAAGGTCATAAATCTCTTTACTTCCCTAAGTGTATCCAGTGATACCtgtaaaccaatgagtatcagagacaagtctcaatcaatttagaaatttatttgatcaaagttaaagacaaatcagtgaaacagcctcaggaggtcttgagaacatgtgcccaagattgtcgggctacagcttggttttatgcattttacgaagacataagat-atcaatcaatatgtgtaagctgtacattggtttgatatgaaaaggcaggacagaccaaaggagggtgggtgttaagaacttccaggtcataggtgtattcaaagatttcataggtggttgaaagtgtttatctaatgacctgtaatcaagagtaggtagtttctgggttaagaaaaagagttgtggagccaaggttttatcatgaagatgaagcctt-------taggctccagagaagatagat i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2313180 523 - 3814455 CTTAGTTTTAGTACTGTACATGCATCACAG----------------------------TCTCCCCCTCTCT--G--------------TCCCCACATCCTGGCTTCCTCCTTTTCTCAATGTCATAAATCTCTTCACTTCCCTAAGTGTATCCAGTGATACCtgtaaaccaataagtatcttaggcaagtcttgatcaatttagaaatttatttggtcaaagttaaaggcatattggtgatacagcctcaggaggtcttgagaatgtgtgctcaaggtggtctagctacagcttgattttatacattttagggagatgtaagct-atcaagcaatatgtgtaagttgtacattggtttgatacg-aaaggcaggatagcccaaaggagggtggatgttgggaacttccaggtcataggtggattcaaagatttcataggtggttttaagagtttgtctaatgacctgtaatcaacagaaaggagtttctttgttaag-aaaagggttgtgaagccagggttttgtaaggcagataaagcctccaggtaacaggcttcagagagaatagat i saiBol1.JH378265 T 63795 C 0 s cebCap1.NW_016107537v1 451914 535 + 3620821 CTCAGTGTTAGTACTGCACATACCTCACAA----------------------------tctccctctctct--c----tttctctctctcCCCACATCCCAGATTCCTCCTTTTCTCAAGGTCATAAATCTCTTTACTTCCCTAAATGTATCCAGTGATACTtgtaaaacaatgagtatcagagacgagtctcaatcaatttagaaatttatttgatcaaagttaaagacaaatcagtgaaacagcctcagaaagtcttgagaacatgtgcccaagattgttgggatacagcttggttttatgcattttatgaagacataagat-atcaatcaatatgtataagctgtacattggtttgatatgaaaaggcaggacagaccaaaggagggtgggtgttaagaacttccaggtcataggtgtattcaaagatttcataggtggttgaaagtgtttatctaatgacctgtaatcaagagaaggaagtttctgggttaagaaaaagagttgtggagccaaggttttatcgtgaagatgaagcctttaggtagcaggctccagagacaatagat i cebCap1.NW_016107537v1 C 0 T 65158 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=375051.000000 s hg38.chr14_KI270725v1_random 91739 77 + 172810 tgtaattgtttcttagtagact-------------taaaaggtgccaaactc---------ttagttaaatctctctgggtcaggaaagagatttaaaa s panTro5.chrY 328205 77 + 26350515 tgtaattgtttcttagtagact-------------taaaaggtgccaaacta---------ttagttaaatctctctgtgtcaggaaagagacttaaaa i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2352 77 + 24701 tgtaattgtttcttagtagact-------------taaaaggtgccaaactc---------ttagttaaatctgtctgggtcaggaaagagacttaaaa i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 43694 68 - 108979918 tgtag------------------------------taaaaggtgccaaactcttaattaaattagttaaattgttctgggtcaggaaagacactt-aaa i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61762399 74 - 96509753 tgtaattgtttcttagcagac--------------taaaaggtgccata--c---------ttagttaaatctctctgggtccggaaagagacttaaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 669595 76 + 11597128 tgtaattgtttcttagcagac--------------taaaaggtgccaaactc---------ttagttaaatctctctgggtcaggaaagagacttaaaa i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 177995 76 + 5626091 tgtaattgtttcttagcagac--------------taaaaggtgccaaactc---------ttagttaaatctctctgggtcaggaaagagacttaaaa i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924215 76 - 107702431 tgtaattgtttcttagcagac--------------taaaaggtgccaaactc---------ttagttaaatctctctgggtcaggaaagagacttaaaa i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224802 76 + 521157 tgtaattgtttcttaacagac--------------taaaaggtgccaaactc---------ttagttaaatctctctgggtcaggaaagagacttaaaa i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 185810 89 + 1278784 tgtaattgtttttcagcagacttaaaatcaaatggtaaaaggtgcca-actc---------ttagttaaatctctgtgcatcaggaaagggacttgaaa i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90637942 69 - 108792865 --------gttcttaacaggct-------------taaaaggtgccagactt---------ttagttaagtctctctgtgtcaggacagagagttgaaa i calJac3.chr14 C 0 I 6 s saiBol1.JH378265 2313703 75 - 3814455 tgtaattgtttcttataagact-------------taagaggtgccagac-----------tcggttaaatctctctgggtcaggacagagacttgaaa i saiBol1.JH378265 C 0 I 6 s cebCap1.NW_016107537v1 387291 75 + 3620821 tgtaattgtttcttataagact-------------taagaggtgctggac-----------tcagttaaatctctctgggtcaggacagagacttgaaa i cebCap1.NW_016107537v1 T 65158 I 6 e ponAbe2.chrUn 2100382 1012 + 72422247 I e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=23699.000000 s hg38.chr14_KI270725v1_random 91816 3 + 172810 agg s panTro5.chrY 328282 3 + 26350515 agt i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2429 3 + 24701 agg i gorGor5.CYUI01005671v1 C 0 C 0 s ponAbe2.chrUn 2101394 3 + 72422247 agg i ponAbe2.chrUn I 1012 N 0 s rheMac8.chr13 43762 3 - 108979918 agg i rheMac8.chr13 C 0 I 6 s macFas5.chr10 61762473 3 - 96509753 agg i macFas5.chr10 C 0 I 6 s macNem1.NW_012014799v1 669671 3 + 11597128 agg i macNem1.NW_012014799v1 C 0 I 6 s cerAty1.NW_012001187v1 178071 3 + 5626091 agg i cerAty1.NW_012001187v1 C 0 I 6 s chlSab2.chr14 90924291 3 - 107702431 agg i chlSab2.chr14 C 0 I 6 s manLeu1.NW_012101586v1 224878 3 + 521157 agg i manLeu1.NW_012101586v1 C 0 I 6 s colAng1.NW_012118465v1 185899 3 + 1278784 agg i colAng1.NW_012118465v1 C 0 I 6 s calJac3.chr14 90638017 3 - 108792865 agg i calJac3.chr14 I 6 C 0 s saiBol1.JH378265 2313784 3 - 3814455 agg i saiBol1.JH378265 I 6 C 0 s cebCap1.NW_016107537v1 387372 3 + 3620821 agg i cebCap1.NW_016107537v1 I 6 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=397053.000000 s hg38.chr14_KI270725v1_random 91819 69 + 172810 aatctctacagaatgtaga----ttttt-cccacaagaaccagctttgcagaggcattttt-aaatacattaaat s panTro5.chrY 328285 69 + 26350515 aatctctacagaatgtaga----ttttt-cccacaagaaccagctttgcagagacattttt-aaatacattaaat i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2432 69 + 24701 aatctctacagaatgtaga----ttttt-ccaacaagaatcagctttgcagaggcattttt-aaatacattaaat i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 43771 70 - 108979918 aatctctaccgaatgtaga----ttttt-cccataagaaacagctttgcagaggcatttttaaaatacaccaaat i rheMac8.chr13 I 6 C 0 s macFas5.chr10 61762482 69 - 96509753 aatctctacagaatatgga----ttttt-cccacaagaaacagctttgcagagacattttc-aaatacatcaaat i macFas5.chr10 I 6 C 0 s macNem1.NW_012014799v1 669680 69 + 11597128 aatttctacagaatatgga----ttttt-cccacaagaaacagctttgcagagacattttc-aaatacatcaaat i macNem1.NW_012014799v1 I 6 C 0 s cerAty1.NW_012001187v1 178080 69 + 5626091 aatttctacagaatatgga----ttttt-cccacaagaaacagctttgcagagacattttc-aaatacatcaaat i cerAty1.NW_012001187v1 I 6 C 0 s chlSab2.chr14 90924300 69 - 107702431 aatctctacagaatatgga----ttttt-cccacaagaaacagctttgcagagacattttc-aaatacatcaaat i chlSab2.chr14 I 6 C 0 s manLeu1.NW_012101586v1 224887 69 + 521157 aatttctacagaatataga----ttttt-cccacaagaaacagctttgcagagacattttc-aaatacatcaaat i manLeu1.NW_012101586v1 I 6 C 0 s colAng1.NW_012118465v1 185908 73 + 1278784 attctccatagaatgtagggtttttttt-cccacaagaaacagctttgcagaggcatttta-aaatacattaaat i colAng1.NW_012118465v1 I 6 C 0 s calJac3.chr14 90638020 69 - 108792865 attctctacagaatgtaga----tcttt-tccacaagaaacagctttgcagaagcatttta-aaatatattacat i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2313787 62 - 3814455 aatctctac-------aga----tttgt-cccacaagaaacagttttgcagaggcatttaa-aaatacattaaat i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 387375 70 + 3620821 aatctctacagaatgtaga----tttttccccacaagaaacagttttgcagaggcatttaa-aaatacattaaat i cebCap1.NW_016107537v1 C 0 I 67278 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=966391.000000 s hg38.chr14_KI270725v1_random 91888 200 + 172810 aacaatatcttggggaaaatactttgatttctcttaggacgtggtatctgtcacattggtatcttattgctataaagagttttctttgtcagtctcaaggtctctgtcttcatattaaaagctggtc-agttgtgcctgaattttaaagggaagagggtaagttcaggcatatccaatcatccgttccgatcatggactgc s panTro5.chrY 328354 200 + 26350515 aacaatatcttgggggaaatattttgatttctcttaggacgtggtatctctcacattggtatcttattgctataaagagttttctttgtcagtctcaaggtctctgtcttcatattaaaagctggtc-agttgtgcctgaattttaaagggaagagggtaagttaaggcatatccaatcatccgttccgatcatggactgc i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2501 200 + 24701 aacaatatcttggggaaaatactttgatttctcttaggacgtggtatctgtcacattggtatcttattgctataaggagttttctttgccagtctcaaggtctctgtcttcatattaaaagctggtc-agttgtgcctgaatttcaaagggaagagggtaagttaaggcatatccaatcatccgttccgatcatggactgc i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 43841 200 - 108979918 aacaatatcttggggaaaatattttgatttctcctcgggtctggtatctgtcgtgttggtatcttattgcgacagagagtttgctttgtcagtctcaaggtctctgtcttaatattaaatgatggtc-agttatgtctgaattttaaagggaagagggtaagttaaggcatatccaatcatccattcccatcatggaccgt i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61762551 200 - 96509753 aacaatatcttggagaaaataccttgatttctcctcgagcctggtatctgtcatgttggtatcttactactataaagagtttcctttgtcagtctcaaggtctctgtcttaatatcaaaaactggtc-agttgtgtctgaattgtaaagggtggtaggtaaattaaggcatattcaatcatccattcccatcatggcctgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 669749 200 + 11597128 aaaaatatcttggggaaaataccttgatttctcctcgagcctggtatctgtcatgttggtatcttactactataaagagtttgctttgtcagtctcaaggtctctgtcttaatatcaaaaactggtc-agttgtgtctgaattgtaaagggtggtaggttaattaaggcatattcaatcatccattcccatcatggcctgt i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178149 200 + 5626091 aacaatatcttggggaaaatactttgatttctcctcgagcctggtatctgtcatgttggtatcttactactataaagagtttgctttgtcagtctcaaggtctctgtcttaatatcaaaaactagtc-agttgtgtctgaattgtaaagggtggtaggtaaattaaggcatattcaatcatccatttccatcatggcctgt i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924369 199 - 107702431 aacaatatcttggagaaaatactttgatttctcctcgagcctggt-cctgtcatgttggtatcttactactataaagagtttgctttgtcagtctcaaggtctctgtcttaatatcaaaaactggtc-agttgtgtctgaattgtaaagggtggtaggtaaattaaggcatattcaatcatccattcccatcatggcctgt i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 224956 200 + 521157 aacaatatcttggggaaaatactttgatttctcctcgagcctggtatctgtcatgttggtatcttactactataaagagtttgctttgtcagtctcaaggtctctgtcttaatatcaaaaactggtc-agttgtgtctgaattgtaaaggatggtaggtaaattaaggcatattcaatcatccattcccatcatggcctgt i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 185981 192 + 1278784 aataatatcttggtta------tttgatttctccttggggctggta--tgtcatgttggtatcttattgagacagagagcttgttttttcagtctcaaggtctctgtcttaatattaaaagctggtc-agttgtgcctgaattttaaaagaagaagggtaagttaaggcatatccaatcacccattcccatcatgacctgc i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90638089 199 - 108792865 aaaaatatcttggggaaaatactttgatttctcctagggcctggtatctgtcatgttagtatcttattgctacaaagagtttgtttca-cagtctcatgatctctgttttaatattaaaagctggtc-agttgtgcctgaatttcaaagggaggaggataacttaaggcatatctggtcatccatccccatcatggtctgt i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2313849 201 - 3814455 aaaaatgtcttggggaagatgctttgatttctcccaggacctggtatctgtcatgttggtatctttttgctacaaagagtttgctttgtcagcctcaaggtctctgtttttatattaaaagctggtcaagttgtgcctgaattttaaagggagaagggtaaattaagtcatatccgatcatctattccaatcatgagctgc i saiBol1.JH378265 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e cebCap1.NW_016107537v1 387445 67278 + 3620821 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=3785.000000 s hg38.chr14_KI270725v1_random 92088 1 + 172810 a s panTro5.chrY 328554 1 + 26350515 a i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2701 1 + 24701 a i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44041 1 - 108979918 a i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61762751 1 - 96509753 a i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 669949 1 + 11597128 a i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178349 1 + 5626091 a i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924568 1 - 107702431 a i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 225156 1 + 521157 a i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186173 1 + 1278784 a i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90638288 1 - 108792865 g i calJac3.chr14 C 0 I 1623 e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2314050 0 - 3814455 C e cebCap1.NW_016107537v1 387445 67278 + 3620821 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1004023.000000 s hg38.chr14_KI270725v1_random 92089 200 + 172810 t-tgtatttcaggttgattttggtgtgtccttggttgagaggaggagttcattcagttggttagggagcttagagtttcatttttggtttacTCACCTATGTCCAGGTAAGAGGGCCCCACACAGGAGGTCTTGCTCAGAACCTGGCTTGCAGGGCTGCTT--ACAGACCTTCTATGTCTCCTGTTGTCATGCACAAGGAAGG s panTro5.chrY 328555 200 + 26350515 t-tgcatttcaggttgattttgttgtgtccttggctgagaggaggagttcattcagttggttagggagcttagagtttcatttttggtttacaCACCTATGTCCAGGTAAGAGGGCCCCACACAGGAGGGCTTGCTCAGAACCTGGCTTGCAGGGCTGCTT--Acagaccttctatgtctcctgttgtcatgcacaaggaagg i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2702 199 + 24701 t-tgtatttcaggttgattttggtgtgtccttggctgagaggaggagttcactcagttggttagggaacttagagtttcatttttggtttacaCACCTATGTCCAGGTAAGAGGGCCCCACA-AGGAGGGCTTGCTCAGAACCTGGCTTGCAGGGCTGCTT--ACAGACCTTCTATGTCTCCTGTTGTCATGCACAAGGAAGG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44042 200 - 108979918 c-tgtatttcaggttgattttggtgtgttcttggctgaaaggaggagttcgttcagttggccagggagcttagagtttcatttttggtttacaTACCTATGTCCAAGTAAGAGGGCCCCACACAGGAAGGCTTGCTAGGAACCTGGCTTGCAGGGCTGCTT--ACAGACCTTCTGTGTCTCCTGTCGTCATGCACAAGGAAGG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61762752 203 - 96509753 cttgtatttcaggttgattttggtgtgttcttggctgagaggaggagtttatgcagttggctagagagcatatagtgtcatttttggtttacaCACCTGTGTCCAGGTAAGAGGGACTCACACAGGAGGGCTTGCACAGAACCTGGCTTGCAGGGCTGCTTACACAGACCTGCTCTGTCTCCTGTTGTCATGCACAAGGAAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 669950 203 + 11597128 cttgtatttcaggttgattttggtgtgttcttggctgagaggaggagtttatgcagttggctagagagaatatagtgtcatttttggtttacaCACCTGTGTCCAGGTAAGAGGGACTCACACAGGAGGGCTTGCACAGAACCTGGCTTGCAGGGCTGCTTACACAGACCTGCTCTGTCTCCTGTTGTCATGCACAAGGAAGG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178350 201 + 5626091 cttgtatttcaggttgattttggtgtattcttggctgagaggaggagtttatgcagttggctagagagaatatagtgtcatttttggtttacaCACCTCTGTCCAGGTAAGAGGGACTCACACAGGAGGGCTTGCACAGAACCTGGCTTGCAGGGCTGCTT--ACAGACCGGCTCTGTCTCCTGTTGTCATGCACAAGGAAGG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924569 201 - 107702431 cttgtatttcaggttgattttggtgtgttcttggctgagaggaggagtttatgcagttggctagagagcatatagtgtcatttgtggttcacaCACCTATGTCCAGGGAAGAGGGACTCACACAGGAGGGCTTGCACAGAACCTGGCTTGCAGGGCTGCTT--ACAGACCTGCTCTGTCTCCTGTTGACATGCACAAGGAATG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 225157 201 + 521157 cttgtatttcaggttgattttggtgtattcttggctgagaggaggagtttatgcaattggctagagagaatatagtgtcatttttggtttacaCACCTGTGTCCAGGTAAGAGGGACTCACACAGGAGGGCTTGCACAGAACCTGGCTTGCAGGGCTGCTT--ACAGACCGGCTCTGTCTCCTGTTGTCATGCACAAGGAAGG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186174 189 + 1278784 cttgtatttcaggttgatttttgcatattcttggctgagaggaggaattcatttatttggccag------------gtcatttttggtttgcaCACCTATGTCCAGGTAAGAGGCATCCACACAGGAGGGCTTGCACAGAACCTGGCTTTCAGGGCTGCTT--ACAGACCTGCTCTGTCTCCTGTTGTCATGCACAAGGAAGG i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90639912 199 - 108792865 -ttgtattttaggttgattttagtat-ttcttggctcagaggagaagttcatttagttggctagagagcttatagtttcatttttggtttgcaTACCTATATCCAGGTAAGAAGGACCCACTCAGGAGAGCTTGTGGAGAACCTGGTTTGCAGGGCTGCTT--ACAGACCTGCTCTGCCTCCTGTTGTCATGCACGAGAAAAG i calJac3.chr14 I 1623 C 0 s cebCap1.NW_016107537v1 454723 200 + 3620821 -TTGTATTTTAGGTTGATTTTAGTATGTTCTTGGCTCAGAGGAGAAGTTCATTTAGTTGGCTAGGGAGCTTATAGTTTCATTTTTGGTATATATACCTATGTCCAGGTAAGAAGGACCCACACAGGAGAGCTTGTGGAGAACCTGGCTTGCAGGGCTGCTT--ACAGACCTGCTCTGCCTCCTGTTGTCATGCACAAGGAAGG i cebCap1.NW_016107537v1 I 67278 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2314050 0 - 3814455 C e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=88738.000000 s hg38.chr14_KI270725v1_random 92289 16 + 172810 ACACAGCCAATGACAA s panTro5.chrY 328755 16 + 26350515 acacagcCAATGACAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2901 16 + 24701 ACACAGCCAATGACAA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44242 16 - 108979918 ACACAGCCAATGACTA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61762955 16 - 96509753 ACACAGCCAATGACTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670153 16 + 11597128 ACACAGCCAATGACTA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178551 16 + 5626091 ACACAGCCAATGACTA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924770 16 - 107702431 ACACAGCCAATGACTA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 225358 16 + 521157 ACACAGCCAATGACTA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186363 16 + 1278784 ACACAGCCAATGACAA i colAng1.NW_012118465v1 C 0 I 104 s calJac3.chr14 90640111 4 - 108792865 ------------ACAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314050 16 - 3814455 acACAGCCGATGACAA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 454923 16 + 3620821 ACACGGCCAATGACAA i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=12550.000000 s hg38.chr14_KI270725v1_random 92305 3 + 172810 CCC s panTro5.chrY 328771 3 + 26350515 CCC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2917 3 + 24701 ACC i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44258 2 - 108979918 -CC i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61762971 2 - 96509753 -CC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014799v1 670169 2 + 11597128 -CC i macNem1.NW_012014799v1 C 0 I 1 s cerAty1.NW_012001187v1 178567 2 + 5626091 -CC i cerAty1.NW_012001187v1 C 0 I 1 s chlSab2.chr14 90924786 2 - 107702431 -CC i chlSab2.chr14 C 0 I 1 s manLeu1.NW_012101586v1 225374 2 + 521157 -CC i manLeu1.NW_012101586v1 C 0 I 1 s calJac3.chr14 90640115 3 - 108792865 CCC i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314066 3 - 3814455 CCC i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 454939 3 + 3620821 CCC i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e colAng1.NW_012118465v1 186379 104 + 1278784 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=100780.000000 s hg38.chr14_KI270725v1_random 92308 16 + 172810 TCAGCCATCCAGGGAG s panTro5.chrY 328774 16 + 26350515 TCAGCCATCTGGGGAG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2920 16 + 24701 TCGGCCATCCGGGGAG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44261 16 - 108979918 TCAGTCATCTCGGGAG i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61762974 16 - 96509753 TCAGCCATCTGGGGAG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014799v1 670172 16 + 11597128 TCAGCCATCTGGGGAG i macNem1.NW_012014799v1 I 1 C 0 s cerAty1.NW_012001187v1 178570 16 + 5626091 TCAGCCAACCGGGGAG i cerAty1.NW_012001187v1 I 1 C 0 s chlSab2.chr14 90924789 16 - 107702431 TCAGCCATCCGAGGAG i chlSab2.chr14 I 1 C 0 s manLeu1.NW_012101586v1 225377 16 + 521157 TCAGCCAACCGGGGAG i manLeu1.NW_012101586v1 I 1 C 0 s colAng1.NW_012118465v1 186483 16 + 1278784 TCAGCCATCTGGGGAG i colAng1.NW_012118465v1 I 104 C 0 s calJac3.chr14 90640118 16 - 108792865 TCAGCCATCTGGGGAG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314069 16 - 3814455 TCAGCCATCTGGGGAG i saiBol1.JH378265 C 0 T 35387 s cebCap1.NW_016107537v1 454942 16 + 3620821 TCAGCCATCTGGGAAG i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=460309.000000 s hg38.chr14_KI270725v1_random 92324 96 + 172810 AAGCTGTGTCTGCAGAGGATGGTCATGAGCTGTGAGTCTAGAGACCTGTGATTGTCTTCAGGGGCCTGTGGTCCTCGGCTTTCATAGGAGTTGTGG s panTro5.chrY 328790 96 + 26350515 AAGCTGTGTCTGCAGAGGACGGTCATGAGCTGTGAGTCTAGAGACCTTTGATTGTCTTCAGGGGCCTGTGGTCCTTGGCTTTCATAGGAGTTGTGG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 2936 96 + 24701 AAGCTGTGTCTGCAGAGGACGGTCATGAGCTGTGAGTCTACAGACCTGTGATTGTCTTCAGGGGCCTGTGGTCCTCGGCTTTCATAGGAGTTGTGG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44277 96 - 108979918 AAGCCGTGTCTGCAGAGGACAGTCATGAGCTGTGAATGTAGAGACCTGTGATTGTCTTCAGGGGCCTGTGGTCCTCAGCTTTCATGGGAGTTGTGT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61762990 96 - 96509753 AACCTGTGTCTGCAGAGGGCTATCATGAGCTATGGGTCAGGCTAACTGTGATTGTCTTCAGGGGCCTGTGGTCCTCAGCTTTCATGGGATTTGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670188 96 + 11597128 AACCTGTGTCTGCAGAGGGCTATCATGAGCTATGGGTCAGGCTAACTGTGATTGTCTTCAGGGGCCTGTGGTCCTCAGCTTTCATGGGATTTGTGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178586 96 + 5626091 AACCTGTGTCTGCAGAGGGCTGTCATGAGCTATGAGTCCAGCTAACTGTGATTGTCTTCAGAGGCCTGCGGTCCTCAGCTTTCATGTGAGTTGTGT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924805 96 - 107702431 AACCTGTGTCTGCAGAGGGCTGTCATGAGCTATGAGTCCAGCTAACTGTGATTGTCTTCAGAGGCCTACGGTCCTCAGCTTTCATGCGAGTTGTGT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 225393 96 + 521157 AACCTGTGTCTGCAGAGGGCTGTCATGAGCTATGAGTCCAGCTAACTGTGATTGTCTTCAGAGGCCTGCAGTCCTCAGCTTTCATGTGAGTTGTGT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186499 96 + 1278784 AAGCTGTGTCTGCAGAGGGCAGTCATGAGCTGTGAGTCTAGAGACTTGTGATTGTCTTCAGGGGCCTGTGGTCTTCAGTTTTCATGGGAGTTTTGT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640134 96 - 108792865 AAGCTGCATCTACAGAGGACAGTCATGACTTGTGAGTCTAGAGACCTGTGTATGTCTTCAGGGGCCTCTAGTCCTTAGCTTTCATGGGAGTTGTGT i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107537v1 454958 96 + 3620821 AAGCTGTGTCTACAGAGGACAGTCATGACCTGTGAGTCTAGAGACCTGTGTCTGACTTCAGGGGCCTGTAGCCCTCAGCTTTCATAGGAATTATGT i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2314085 35387 - 3814455 T e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=363256.000000 s hg38.chr14_KI270725v1_random 92420 62 + 172810 GGGCACTGGCTCAAATAGCATCCACCAGGATTCTAATCAGAATATCTCATTCACAGAAGGCA s panTro5.chrY 328886 62 + 26350515 GGGCACTGGCTTAAATAGCATCCACCAGGATTCCAATCAGAATATCTCATTCACAGAAGGCA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3032 62 + 24701 GGGCACTGGCTCAAATAGCATCCACCAGGATTCTAATCAGAATATCTCATTCACAGAAGGCA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44373 62 - 108979918 GGGCGCTGGCTCAAAGAGTATCCACCAGGATATTAATCAGAATATCTCATTCACAGAAGGCA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763086 62 - 96509753 GGAAACTGGCTCAAAGAGCATCCACCGGGATTCTTATCAGAATATCTCATTCACAGAAGGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670284 62 + 11597128 GGAAACTGGCTCAAAGAGCATCCACCGGGATTCTTATCAGAATATCTCATTCACAGAAGGCG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178682 62 + 5626091 TGGAACTGGCTCAAAGAGCATCCACCAGGATTCTTATCAGAATATCTCATTCACAGAAGGCA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924901 62 - 107702431 TGGAACGGGCTCAAAGAGCAGCCACCAGGATTCTTATGAGAATATCTCATTCACAGAAGGCG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 225489 62 + 521157 TGGAACTGGCTCAAAGAGCATCCACCAGGATTCTTATGAGAATATCTCATTCACAGAAGGCA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186595 62 + 1278784 GGGTGCTGGCTCAAAGAGCATCCACCAGGATTCTAATCAGAATATCTCATTCACAGAAGGCA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640230 62 - 108792865 GGGTGCTGGCTCAAATAGCATCCACCAGGATTTTTAGTAGAATATCTCATTCACAGAAGGCA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2278698 62 - 3814455 GGCCCCTGACTCCAGAAGGGTCTACCAGGATCCTTATCTGAATATCTCACTCACAGAAGGCA i saiBol1.JH378265 T 35387 I 35325 s cebCap1.NW_016107537v1 455054 62 + 3620821 GGGTGCTGGCTCAAATAGCATCCACCAGGATTTTTATTAGAATATCTCATTTACAGAAGGCA i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=156244.000000 s hg38.chr14_KI270725v1_random 92482 27 + 172810 GTGGGTGATATGACAGTACAGAGGGAC s panTro5.chrY 328948 27 + 26350515 GTGGGTGATATGACAGCACAGAGGGAC i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3094 27 + 24701 GTGGGTGATATGACAGCACAGAGGGAC i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44435 27 - 108979918 GTGGGTGATATGACAGCACAGAGGGAC i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763148 27 - 96509753 GTGGGTGATACGACAGCACAGAGGGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670346 27 + 11597128 GTGGGTGATACGACAGCACAGAGGGAC i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178744 27 + 5626091 GTGGGTGATATGACAGCACAGAGGGAC i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924963 27 - 107702431 GTGGGTGATATGACAGCACAGAGGGAC i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 225551 27 + 521157 GTGGGTGATATGACAGCACAGAGGGAC i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186657 27 + 1278784 GTGGGGGATATGACAGCACAGAGGGAA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640292 27 - 108792865 GTGGGTGACATGACAGCACAGAGGGAC i calJac3.chr14 C 0 C 0 s cebCap1.NW_016107537v1 455116 27 + 3620821 ATGCGTGACATGACAGCACAGAGGGAC i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e saiBol1.JH378265 2278760 35325 - 3814455 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=877847.000000 s hg38.chr14_KI270725v1_random 92509 152 + 172810 TCTGTGGGGCCAGCTGCATGGAGCACTCTGGGAGAGTCACTG-GCACCCGTGCTAGACAGATCTTCATTCAACTTCTGGAGCACACGGATTTAGATCTCTTTACATCATTTTGAAACACCATTTATCATTCTGAAGGAAACCACTGTAATTAA s panTro5.chrY 328975 152 + 26350515 TCTGTGGGGCCAGCTGCATGGAGCACTCTGGGAGAGCCACTG-GCACCCGTGCTAAACAGAGCTTCATTCAACTTCTGGAGCACACCGATTTAGATCTCTTTACATCATTTTGAAAGACCATTTATAATTCTGAAGGAAACCACTGTAATTAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3121 152 + 24701 TCTGTGGGGCCAGCTGCATGGAGCACTCTGGGAGACTCACTG-GCACCCGTGCTAGACAGAGCTTCATTCAACTTCTGGAGCACACGGATTTAGATCTCTTTACATCATTTTGAAAGACCATTTATCATTCTGAAGGAAACCACTGTAATTAA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44462 152 - 108979918 TCTCTGGGGCCAGTTGCATGGAGCACTCTGGGAGAGTCACTG-GCACTCATGCTAGATAGAGCTTCATGCAACTTCTGAAGAACATGGATTTGGATCTCTTTACATCATTTTGAAAGACCACTTATCATACTGAAGGAAACCACTGTAATTAA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763175 152 - 96509753 TCTGTGGGGCCAGATGCATGGAGCACTCCAGGAGAGTCACTG-GCACCTGGGCTAGACAGAGCTTCTTGCAACTTCTGAAGCACACGGATTCGGATCTCTTAACATCATTTTGAAGGACTATTTATTATTCAGAAGGCAGCCATTGTAATTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670373 152 + 11597128 TCTGTGGGGCCAGATGCATGGAGCACTCCGGGAGAGTCACTG-GCACCCGGGCTAGACAGAGCTTCTTGCAACTTCTGAAGCACACGGATTCGGATCTCTTAACATCATTTTGAAGGACTATTTATTATTCAGAAGGCAGCCATTGTAATTAA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 178771 152 + 5626091 TCTGTGGGGCCAGCTGCATGGAGCACTGTGGGAGAGTCACTG-GCACCCAGGCTAGACAGAGCTTCTTGCAACTTCTGAAGCACACGGATTCGGATCTCTTAACATCATTTTGAAGGACTATTTATTATTCAGAAGGCAACCATTGTAATTAA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90924990 151 - 107702431 TCTGTGGGGCCAGCTGCATGGAGCACTCTGGGAGAGTCACTG-GCACCCGGGCTAGACAGAGCTTCTTGC-ACTTCTGAAGCACACGGATTCGGATCTCTTAACATCATTTTGAAGGACTATTTATTATTCAGAAGGCAGCCATTGTAATTAA i chlSab2.chr14 C 0 T 61899 s manLeu1.NW_012101586v1 225578 152 + 521157 TCTGTGGGGCCAGCTGCATGGAGCACTCTGGGAGAGTCACTG-GCACCCGGGCTAGACAGAGCTTCTTGCAACTTCTGAAGCACACGGATTCAGATCTCTTAACATCATTTTGAAGGACTATTTATTATTCAGAAGGCAGCCATTGTAATAAA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186684 152 + 1278784 TCTGTGGGGCCAACGGCATGGAGTACTGTGGGAGAGTCACTG-GCACCCGGGCTAGACAGAGCTTCTTGCAACTTCTGAAGCACATGGATTTGGATCTCTTAACATCATTTTGAAAGACCATTTATCATTCTGAAGGCAACCACTGTAATTAA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640319 149 - 108792865 --TCTGGGTCCAGCTGCATGGAGCATTCTTGGAGAGACACTG-GCACCCATGCTAGATGGAGCTTCAGGCAACTTCTGAATCACATGGATTTGGATCTCTTAACATAGTTTTGAAAGTCCATTTATCATTCTGAA-GCAACCACTGTAATTAA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314085 150 - 3814455 TCTGTGGGTCCAGCTGCATGGAACACTCTGGGGAAGTCACTGTGCACCCATGCTAGGCAGGGCGTCATGCAACTTCCGAAGCACATGGATTTGGATCTCTTAACATCATTTTGAAAGTCCATTTGTCATTCTGAAGGCAATCACTGTAAT--- i saiBol1.JH378265 I 35325 C 0 s cebCap1.NW_016107537v1 455143 151 + 3620821 TCTGGGTGTTCAGCTGCATGGAGCATTCTGGGAGAGACACTG-GCACCCATGCTAGATGGAGCTTCAGGCAACTTCTGAATCACATGGATTTGGATCTCTTAACATCATTTTGAAAGTCCATTTATCATTCTGAA-GCAACCACTGTAACTAA i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=17868.000000 s hg38.chr14_KI270725v1_random 92661 3 + 172810 CTA s panTro5.chrY 329127 3 + 26350515 CTA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3273 3 + 24701 CTA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44614 3 - 108979918 CTA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763327 3 - 96509753 CTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670525 3 + 11597128 CTA i macNem1.NW_012014799v1 C 0 I 346 s cerAty1.NW_012001187v1 178923 3 + 5626091 CTA i cerAty1.NW_012001187v1 C 0 I 51375 s chlSab2.chr14 90863242 3 - 107702431 CTA i chlSab2.chr14 T 61899 C 0 s manLeu1.NW_012101586v1 225730 3 + 521157 CTA i manLeu1.NW_012101586v1 C 0 T 55697 s colAng1.NW_012118465v1 186836 3 + 1278784 CTA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640468 3 - 108792865 CTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314235 2 - 3814455 -TA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 455294 3 + 3620821 CAA i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=100754.000000 s hg38.chr14_KI270725v1_random 92664 29 + 172810 AGGTAACATCTTTAATAGGTAGAAAG-AAA s panTro5.chrY 329130 29 + 26350515 AGGTAATATCTTTAATAGGCAGAAAG-AAA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3276 29 + 24701 AGGTAACATCTTTAATAGGTAGAAAG-AAA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44617 29 - 108979918 AGGTAACATCTTTAATAGGTAGAAAC-AAA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763330 29 - 96509753 TGATAACTTATGTAATAACTAGGAAG-GAA i macFas5.chr10 C 0 I 310 s cerAty1.NW_012001187v1 230301 29 + 5626091 AGGTAACATCTTTAATAGGTAGAAAC-AAA i cerAty1.NW_012001187v1 I 51375 C 0 s chlSab2.chr14 90863245 29 - 107702431 AGATAACATATTTGATAGCTAAGAAT-AAA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 170036 29 + 521157 AGATAACATATTTGATAGCTAAGAAT-AAA i manLeu1.NW_012101586v1 T 55697 C 0 s colAng1.NW_012118465v1 186839 29 + 1278784 AGATAACATGTTTAATAGCTAGGAAT-AAA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640471 28 - 108792865 AGATAATATCTTTAGTAGCTGTGAAT-AA- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314237 29 - 3814455 AGATAATATCTTTAATAGCTAGAAATAAA- i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 455297 28 + 3620821 AGATAACATCTTTAATAGCTATGAAT-AA- i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e macNem1.NW_012014799v1 670528 346 + 11597128 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=43132.000000 s hg38.chr14_KI270725v1_random 92693 8 + 172810 AAAGTGAT s panTro5.chrY 329159 8 + 26350515 AAAGTGAT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3305 8 + 24701 AAAGTGAT i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44646 8 - 108979918 AAGGTGAT i rheMac8.chr13 C 0 I 1 s macFas5.chr10 61763669 8 - 96509753 aaaGTAAT i macFas5.chr10 I 310 C 0 s cerAty1.NW_012001187v1 230330 8 + 5626091 AAGGTGAT i cerAty1.NW_012001187v1 C 0 T 51056 s chlSab2.chr14 90863274 8 - 107702431 AAAGTGAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 170065 8 + 521157 AAAGTGAT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186868 8 + 1278784 AAAGTTAT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640499 8 - 108792865 AAAGTGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314266 8 - 3814455 AAAGTGAT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 455325 8 + 3620821 AAAGTGAT i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e macNem1.NW_012014799v1 670528 346 + 11597128 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=135703.000000 s hg38.chr14_KI270725v1_random 92701 32 + 172810 TATTTTATTGCCAAGATGATTACAAGAAAAGA s panTro5.chrY 329167 32 + 26350515 TATTTTATTGCCAAGATGATTACAAGAAAAGA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3313 32 + 24701 TATTTTATTGCCAAGAGGATTACAAGAAAAGA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44655 28 - 108979918 TATTTTATTGCCAGGATGATAACAAGAA---- i rheMac8.chr13 I 1 C 0 s macFas5.chr10 61763677 27 - 96509753 -ATTTTATTGCTAAGACGATTACAAGAT---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670874 28 + 11597128 TATTTTATTGCTAAGACGATTACAAGAT---- i macNem1.NW_012014799v1 I 346 C 0 s cerAty1.NW_012001187v1 179282 28 + 5626091 TATTTTATTGCTAAGACGATTACAAGAT---- i cerAty1.NW_012001187v1 T 51056 C 0 s chlSab2.chr14 90863282 32 - 107702431 TATTTTATTGCTAGTGGTTTTACTAGAAAACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 170073 32 + 521157 TATTTTATTGCTAATAGGATTACAAGAAAACA i manLeu1.NW_012101586v1 C 0 I 56009 s colAng1.NW_012118465v1 186876 32 + 1278784 TATTTTATTGCTAAGATGATTACAAGAAAACA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640507 28 - 108792865 TATTTTATTGCTAAGATTATTACAAGGA---- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314274 28 - 3814455 TATTTTATTGCTAAGAGGATTACAAGAA---- i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 455333 28 + 3620821 TACTTTATTGCTAAGATTATTACAAGGA---- i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=7098.000000 s hg38.chr14_KI270725v1_random 92733 1 + 172810 A s panTro5.chrY 329199 1 + 26350515 A i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3345 1 + 24701 A i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44683 1 - 108979918 A i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763704 1 - 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670902 1 + 11597128 A i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 179310 1 + 5626091 A i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90863314 1 - 107702431 A i chlSab2.chr14 C 0 I 62206 s manLeu1.NW_012101586v1 226114 1 + 521157 A i manLeu1.NW_012101586v1 I 56009 C 0 s colAng1.NW_012118465v1 186908 1 + 1278784 A i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640535 1 - 108792865 A i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314302 1 - 3814455 A i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 455361 1 + 3620821 A i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1114992.000000 s hg38.chr14_KI270725v1_random 92734 195 + 172810 ACAA--ACAAAAATAGCATGAAGG-AAAGAGCAACACTAGACTGAGGGCTTTGGGTAAGAGGTTGAGACTTAGTAGTGAATGCCCTGGGCCATCTTCTGTCAAAAGGGAGGGACAATCAGCTAAGGGAAATATGCAGTAGAGGCAAAATCTTGGTTAGT-AAAGAATCCTAAGAGAAAACAAGAAGTCTCCTTCCTGAG s panTro5.chrY 329200 196 + 26350515 ACAA--ACAAAAATAGCATGAAGG-AAAGAGCAACACTAGACTGAGGGCTTTGGGTAAGACGTTGAGACTTAGTAGTGAATGCCCTGGGCCAACTTCTGTCAAAAGGGAGGGACAATCAGCAAAGGGAAATATGCAGTAGAGGCAAAATCTTGATTAGTAAAAGAATCCTAAGAGAAAACAAGAAGTCATCTTCCTGAG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3346 195 + 24701 ACAA--ACAAAAATAGCATGAAGG-AAACAGCAACACTAGACTGAGGGCTTT-GGTAAGAGGTTGAGACTTAGTAGTGAATGCCCTGGGCCATCTTCTGTCAAAAGGGAGGGACAATCAGCAAAGGGAAATATGCAGTAGAGGCAAAATCTTGGTTAGTAAAAGAATCCTAAGAGAAAACAAGAAGTCTCCTTCCTGAG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44684 195 - 108979918 ACAA--ACAAAAATAACAAGAAGGAAAAGAGCAACCCTAGACTCAGGGCTTTGGGTAAGAGGTGGAGACTCAGTAGTGAATCCCCTGGGCCATC-TCTGTCAATAGAGAGGGACAATCAGGAAAGGGAAAAGTGCAATAGAGGCAAAATCTTGGTTAGTAAAAGAATCCTAAGAGAAAACAAG-AGTCTCCTTCCTGAG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763705 196 - 96509753 ACAA--ACAAAAATAGCATGAAGGAAAAGAGCAACCCTAGACTGAGGGCTTTGGGTAAGAGCTTGAGACTTAGTAGTGAATCCCCTGGGCCATCTTCTGTCAATAGAGAGGGACAATCAGGAAAGAGAAATGTGCAGTAGAGGCAAAATCTTGGTGAGCAAAAGAATCCTAACAGGAAGCAAC-AGTCTCCTTCCTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 670903 196 + 11597128 ACAA--ACAAAAATAGCATGAAGGAAAAGAGCAACCCTAGACTGAGGGCTTTGGGTAAGAGCTTGAGACTTAGTAGTGAATCCCCTGGGCCATCTTCTGTCAATAGAGAGGGACAATCAGGAAAGAGAAATGTGCAGTAGAGGCAAAATCTTGGTGAGCAAAAGAATCCTAACAGGAAGCAAC-AGTCTCCTTCCTGAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 179311 195 + 5626091 ACAA--ACAAAAATAGCATGAAGGAAAAGAGCAACCCTAGATTGAGGGCTTTGGGTAAGAGCTTGATACTTAGTAGTGAATCCCC-GGGCCATCTTCTGTCAATAGAGAGGGACAATCAGGAAAGGGAAATGTGCAGTAGAGGCAAAATCTTGGTTAGTAAAAGAATCCTAACAGGAAGCAAC-AGTCTCCTTCCTGAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90925521 196 - 107702431 ACAA--ACAAAAATAGCATGAAGGAAAAGAGCAACCCTAGACTGAGGGCTTTGGGTAAGAACTTGAGACTTAGTAGTGAATCCCCTGGGCCATCTTCTGTCAATAGAGAGGGACAATCAGGAAAGGGAAATGTGCAGTAGAGGCAAAATCTTGGTTAGTAAAAGAATCCTAACAGGAAGCAAC-AGTCTCTTTCCTGAG i chlSab2.chr14 I 62206 C 0 s manLeu1.NW_012101586v1 226115 196 + 521157 ACAA--ACAAAAATAGCATGAAGGAAAAGAGCAACCCTAGACTGAGGGCTTTGGGTAAGAGCTTGAGACTCAGTAGTGAATCCCCTGGGCCATCTTCTGTCAATAGAGAGGGACAATCAGGAAAGGGAAATGTGCAGTAGAGGCAAAATCATGGTTAATAAAAGAATCCTAAGAGAAAACAAG-AGTCTCCTTCCTGAG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 186909 197 + 1278784 ACAA--ACAAAAATAGTGTGAAGGAAAAGAGCAACACTAGACTGAGGGCTTTGGGTAAGAGGTTGCGACTCAGTAGTGAATCCCCTGGGCCATCTTCTGTCAATAGAGAGGGACAATCAGGAAAGGGAAATGTGCAGAAGACGCAAAATCTTGTTTTGTTCAAGAATCCTAACAGGAAACAAGAAGTCTCCTTTCTGAG i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90640536 194 - 108792865 ACAA--ACAAAAATAGCATGAAGGAAAAGAGCAACACTAAACTGAGGGCTTTGGGTAAGAGTTTGTGACTCAGTAGTGAAGTGCCTGGACCATCTTCTGTCAGAAAAGAGGAAAAATCAGGAAACAGAAATGTGCAGGAGAGGCAAAATCTTGCTTAGTAAAAAAATCTTAAGAGAA---AAGAAGTCTCCTTCCTGAG i calJac3.chr14 C 0 I 558 s saiBol1.JH378265 2314303 194 - 3814455 ACAAAGAAAAAAATAGCATGAAGGAAGACAGCAACACTAGACTGACGGCTTTGGGTAAGAGTCTGAGACTCAGTAGCGAAGCAGCTGGGCAGTCTTCTGCT--AAAAGAGAGACAATCAGGAAAGGGAAATGTGCTGCAGAGGCAAAATCTTGCTTAGT---AAAATACTAAGAGAAAACAAGAAGTCTCCCTCCTGAG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 455362 197 + 3620821 GCAA--ACAAAAATAGCATGAAGGAAGACAGCAACACTAGACTGAGGGCTTTGGGTAAGAGTTTGTGACTCAGTAGTGAAGTGCCCGGGCCATCTTCTGTCAAAGAAGAGGAAAAATCAGGAAAGGGAAATGTGCAGGAGAGGCAAAATCTTGCTTAGTAAAAGAATCCTAAGAGAAAACAAAAAGTCTTCTTCCTGAG i cebCap1.NW_016107537v1 C 0 I 557 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=958865.000000 s hg38.chr14_KI270725v1_random 92929 164 + 172810 CATCATGTTGGTGTCGGGAAGATGCACATAA-TCCCCCGATTGCATGTCTTACACTTTTCAGCAATTAGTGC-TCAGCATGAATTTAGAAGACACCATTCACTTCACAGCACGTGGGGACACAGTCAAGGCAGCGCTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG s panTro5.chrY 329396 165 + 26350515 CATCATGTTGGTGTCGGGAAAATGCACATAATTCCCCCCATTGCATGTCTTACACTTTTCAGCAATTAGGGC-TCAGCATGAATTTAAAAGACACCATTCACTTCACAGCAGATGGGGACACAGTCAAGGCAGCGGTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3541 164 + 24701 CATCATATTGGTGTCGGGAAGATGCACATAA-TCCCCCCATTGCATGTCTTACACTTTTCAGCAATTAGGGC-TCAGCATGAATTTAGAAGACACCATTCACTTCACAGCAGATGGGGACACAGTCAAGGCAGCGGTGAGAGGCAAGGCTGGGCTTTCATTCTCAG i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 44879 165 - 108979918 CATCATGTTGGTGTTGGGAAGATGCACATAA-TCCCCATATTCCATGTCTTACACTTTTCAGCAATTAGGGCTTCAGCATGAATTTAGAAGACACCACTCACTTCACAGCAGATGGGGACACAGTCAAGGCAGAGGTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61763901 164 - 96509753 CATCATGTTGGTGTTGGGAAGATGCACATAA-TCCCCACATTCCAGGTCATACACTTTTCAGCAATTCAGGC-TCAGCATGAATTTAGAAGGCACCATTCACTTCACAGCAGATGGGCACACAGTCAAGGCAGCGGTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671099 164 + 11597128 CATCATGTTGGTGTTGGGAAGATGCACATAA-TCCCCACATTCCAGGTCATACACTTTTCAGCAATTCAGGC-TCAGCATGAATTTAGAAGGCACCATTCACTTCACAGCAGATGGGCACACAGTCAAGGCAGCGGTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 179506 164 + 5626091 CATCATGTTGGTGTTGGGAAGATGCACATAA-TCCCCACATTCCATGTCTTACACTTTTCAGCAATTCAGGC-TCAGCATGAATTTAGAAGACACCATTCACTTCACAGCAGATGAGGACAGAGTCAAGGCAGCGGTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90925717 164 - 107702431 CATCATGTTGGTGTGGGGAAGATGCACATAA-TCCCCACATTCCATGTCTTACACTTTTCAGCAATTCAGGC-TCAGCATGAATTTAGAAGACAGCTTTGACTTCACAGCAGATgaggacagagtcaaggcagaggtgagaggcaaggcTGGGCTTTCAGTCTCAG i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 226311 164 + 521157 CATCAGGTTGGTGTCAGGAAGATGAACATAA-TCCCCACATTCCAGGTCTTACACTTTTCAGCAATTAGGGC-TCAGGATGAATTCAGAAGACACCATTCACTTCACAGCAGATGGGGACAGAGTCAAGGCAGCGGTGAGAGGCAAGGCTGGGCTTTCAGTCTCAG i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 187106 158 + 1278784 CATCA------CGGCGGGAAGATGGGTTTAA-TCTCCACATTCCGTGTCTCACACTTTTCAGCAATTAGGGC-TCAGGATGAATTTAGAAGACATCATTCACTTCACAGCAGATGGGGACACAGTCAAGGCAGTAGTGAGAGACAAGGCTGGACTTTCAGTCTCAG i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90641288 164 - 108792865 CATCATGTTGGTGTTGGGAAGATGCATATAG-TTCCC-TATTTCATGTCTTACACTTTTCAGCAATTAGGGCTTCAGTACGAATTTAGAAGACACCATTCACTTCACAGCAGATGGCGACACAGTCAAGGCAGTGGTGATATGCAAGGCTGAGCTTTCAGTCTCAG i calJac3.chr14 I 558 C 0 s saiBol1.JH378265 2314497 157 - 3814455 CTTCATGCTGGTGTTGGGAAGATGCATATAA-TCCCC-TATTTCATGTCTTACAC--TTCAGCAATTAGGGCTTTGGCATGAATTTAGAAGACATTATTCAATT---AGCAGATGTGGACATAGTCAAGGCAGTAGTGAGAGGCAAGGCTGGACTTTTGGTCTC-- i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456116 164 + 3620821 CATCATGTTGGTGTTGGGAAGATGCATATAA-TCCCC-TGTTTCATGCCTTACACTTTTCAGCAATTAGGGCTTCAGTACGAATTTAGAAGACACCATTCACTTCACAGCAGATGGCGACACAGTCAAGGCAGTGGTGAGAGGCAAGGCTGAGCTTTCAGTCTCAG i cebCap1.NW_016107537v1 I 557 C 0 e tarSyr2.KE938805v1 8681 5628 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=42747.000000 s hg38.chr14_KI270725v1_random 93093 6 + 172810 CGCACA s panTro5.chrY 329561 6 + 26350515 AGCACT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3705 6 + 24701 AGCACA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45044 6 - 108979918 AGCACA i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61764065 6 - 96509753 AGCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671263 6 + 11597128 AGCACA i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 179670 6 + 5626091 AGCACA i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90925881 6 - 107702431 AGCACA i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 226475 6 + 521157 AGCACA i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 187264 6 + 1278784 AGCACA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90641452 6 - 108792865 AGCACA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2314654 6 - 3814455 AGTACA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456280 6 + 3620821 AGCACA i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE938805v1 14309 6 + 186790 CGCACA i tarSyr2.KE938805v1 I 5628 I 587 e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=223858.000000 s hg38.chr14_KI270725v1_random 93099 39 + 172810 GAGCAGGTTCCCCACTACTCCGCACCCTGGTGTCTCCTC s panTro5.chrY 329567 38 + 26350515 GAGCAGGTT-CCCACTACTCCGCACCCTGGTGTCTCCTC i panTro5.chrY C 0 I 9 s gorGor5.CYUI01005671v1 3711 39 + 24701 GAGCAGGTTCCTCACTACTCCGCACCCTGGTGTCTCCTC i gorGor5.CYUI01005671v1 C 0 I 9 s rheMac8.chr13 45050 39 - 108979918 GAGCAGGTTCCCCACTCCTCCGCAGCCTGGTGTCTCCTC i rheMac8.chr13 C 0 I 9 s macFas5.chr10 61764071 39 - 96509753 GAGCAGGTTCCCCACTACTCCACAGCCTGCTGTCTCCTC i macFas5.chr10 C 0 I 9 s macNem1.NW_012014799v1 671269 39 + 11597128 GAGCAGGTTCCCCACTCCTCCGCAGCCTGGTGTTTCCTC i macNem1.NW_012014799v1 C 0 I 9 s cerAty1.NW_012001187v1 179676 39 + 5626091 CAGCAGGTTCCCCACTACTCCGCAGCCTGCTGTCTCCTC i cerAty1.NW_012001187v1 C 0 I 9 s chlSab2.chr14 90925887 39 - 107702431 GAGCAGGTTCCCCACTGCTCGGCAGCCTGGTGTCTCCTC i chlSab2.chr14 C 0 I 9 s manLeu1.NW_012101586v1 226481 39 + 521157 GAGCAGGTTCCCCACTGCTCCGCAGCCTGATGTCTCCTC i manLeu1.NW_012101586v1 C 0 I 9 s colAng1.NW_012118465v1 187270 39 + 1278784 GAGCAGGTTCCCCACTACTCCGCAGCCTGATGTCTTCTC i colAng1.NW_012118465v1 C 0 I 9 s calJac3.chr14 90641458 39 - 108792865 GAGCAGCTTCCCCACAACTCCACACACTGGTGGCTCCTC i calJac3.chr14 C 0 I 9 s saiBol1.JH378265 2314660 39 - 3814455 GAGCAGGCTCTCCACAACTCTGCACCCTGGTGTCTCCTT i saiBol1.JH378265 C 0 I 62276 s cebCap1.NW_016107537v1 456286 39 + 3620821 GAGCAGCTTCCCCACAACTCCACACACTGGTGGCTCCTC i cebCap1.NW_016107537v1 C 0 I 9 e tarSyr2.KE938805v1 14315 587 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1142708.000000 s hg38.chr14_KI270725v1_random 93138 216 + 172810 CCAGATGTTCCACCTCATTCTTGCCTTAAGGGCTCCAAGTTGTTAATGGGACAGTAGCCCTCTTCCTTTCCCAGGGTTTCTAAGAATTTGGCTCTCTTTTGTGTATTGTGGGGTTTGTTTGCCATCTAGAGGCAGC-TTTTTGGCATAGCAACTTACAGGCTTTTTCTACTTGTGATAGTGAaaataaatacataaataaattcatcataaataata s panTro5.chrY 329614 216 + 26350515 CCAGATGTTCCACCACGTTCTTGCCTTAAGGGCTCCAAGTTGTTAATGGGACAGTAGCCCTCTTCCTTTCCCAGGGTTTCTAAGAATTTGGCTCTATTTTGTGTATTGCGGGGTTTGTTTGTCATCTAGAGGCAGG-TTTTTGGCATATCAACTTACAGGCTTTTTCTACTTGTGATAGCGAaaataaatacataaataaattcatcataaataata i panTro5.chrY I 9 C 0 s gorGor5.CYUI01005671v1 3759 216 + 24701 CCAGATGTTCCACCTCATTCTTGCCTTAGGGACTCCAAGTTGTTAATGGGACAGTAGCCCTCTTCCTTTCCCAGGGTTTCTAAGAATTTGGCTCTCTTTTGTGCATTGTGGGGTTTGTTTGCCATCTAGAGGCAGG-TTTTTGGCATAGCAACTTATAGGCTTTTTCTACTTGTGATAGCGAaaataaatacataaataaattcatcataaataata i gorGor5.CYUI01005671v1 I 9 C 0 s rheMac8.chr13 45098 216 - 108979918 CCAGATGTTCCACCTCATTCTCGCCTTAAGGGCTCCAACTTGTTAATGGGACTGTAGCCCTCTTCCTTTCCCAGGGTGTCTAAGAACTTGGCTGTCTTTTGTGTATTGTGGGGTTTGCTTGCCATCTAGAGGCAGGTTTTTTGGCATAACAGTTTATAGGCTTTTTCTACTTGTGATATCG-aaataattacataaataaatttatcataagtaata i rheMac8.chr13 I 9 I 24 s macFas5.chr10 61764119 215 - 96509753 CCAGATGTTCCAACTCATTCTTGCCTTAAGAGCTCCAATTTGTTAATGGGACAGTAGCCCTCTTCCTTTCCCAGGGTGTCTAAGAACTTGGCTGTCTTTTGTGTATTGTGGGGTTTGTTTGTCAT-TAGAGGCAGG-TTTTTGGTATAGCAACTTACTGGCTTTTTCTACTTGTGATATCGAaaataattacataaataaatttgccataaataata i macFas5.chr10 I 9 C 0 s macNem1.NW_012014799v1 671317 215 + 11597128 CCAGATGTTCCAACTCATTCTTGCCTTAAGAGCTCCAAGTTGTTAATGGGACAGTAGCCCTCTTCCTTTCCCAGGGTGTCTAAGAACTTGGCTGTCTTTTGTGTATTGTGGGGTTTGTTTGTCAT-TAGAGGCAGG-TTTTTGGTATAGCAACTTACTGGCTTTTTCTACTTGTGATATCGAAAATAATTACATAAATAAATTTGCCATAAATAATA i macNem1.NW_012014799v1 I 9 C 0 s cerAty1.NW_012001187v1 179724 216 + 5626091 CCAGATGTTCCACCTCATTCTTGCCTTAAGGGCTCCAAGTTGTTAATGGGACACTGGCCCTCTTCCTTTCCCAGGGTGTCTAAGAACTTGGCTGTCTTTTGTGTATTGTGGGGTTTGTTTGTCATCTAGAGGCAGG-TTTTTGGTATAGCAACTTACGGGCTTTTTCTACTTGTGATATTGAAAATAATTACATAAATAAATTTGCCATAAATAATA i cerAty1.NW_012001187v1 I 9 C 0 s chlSab2.chr14 90925935 216 - 107702431 CCAGATGTTCCACCTCATTCTTGCCTTAAGGGCTCCAAGTTATTAATGGGATAGTAGCCCTCTTCCTTTCCCAGGGTGTCTAAGAGCTTGGCTGTCTTTTGTATATTGTGGGGTTTGTTTGTCATCTAGGGGCAGG-TTTTTGGTATAGCAACTTATGGGCTTTTTCTACTTGTGATATCGAAAATAATTACATAAATAAATTTGCCATAAATAACA i chlSab2.chr14 I 9 C 0 s manLeu1.NW_012101586v1 226529 216 + 521157 CCAGATGTTCCACCTCATTCTTGCCTTAAGGGTCCCAATTTGTTAATGTGACAGTAGCCCTCTTCCTTTCCCAGGGTTTGTTAGAACTTGGTTCTCTTTTGTGTATTGTGGGATTTCTTTGCCATCTAGAGGCAGG-TTTTTGGCATAGCAGTTTATAGGCTTTTTCTACTTGTGATATTGAaaataattacataaataaattcatcataaataata i manLeu1.NW_012101586v1 I 9 C 0 s colAng1.NW_012118465v1 187318 212 + 1278784 CCAGATGTTCCAGGCCATTCTTGCCTTGGGGGCTCCAAGTTGTTAATGGGACACTAGCCCTCTTCCTTTCCCAGGGTGTCTAAGAACTTGGCTGTCTTTTGGGAAGTGTGGGGTTTGTTTGCCATCTAGAGGCAGA-TCTTTGGCATAGCAACTTATAGGAGTTTTCTAC-TGTGATAGCGAaaatagacacataaataaatttatcataaata--- i colAng1.NW_012118465v1 I 9 C 0 s calJac3.chr14 90641506 200 - 108792865 CCAGTTGTTGCACGCCATTCTTGCCTTAGTAGCTCCAAGATGATAATGCCACACTAGCCCTC-TCCTTTCCCAGGGTTTCTAAGAACTTAGCACTC--TTGTGTATTAGGGGATTTGTTTGCCATGTAAAGGCAGA-TCTTTGACATAGCCATTTATGGGA--TTTCTACTTCTGATAGAAAAAGTAAATACATAA-----------ATAAATAATA i calJac3.chr14 I 9 C 0 s saiBol1.JH378265 2376975 211 - 3814455 CCGGTTGTTGTATGTCATTCTTGTCTTAGTAGCTCCAAGATGATTATGCCACACTAGCCCTC-TCCTTTCCCAGGGTTTCTAAGAACTTAGCATTC--TTGTGTATTAGGGGGTTTGTCTGCCATGTAAAGGCAGA-TCTTTGACATAACCACTTATGGGA--TTTCTACTTCTGATAGCAAAAATAAATACGTAAATAAATTCATCATAAATAATA i saiBol1.JH378265 I 62276 C 0 s cebCap1.NW_016107537v1 456334 211 + 3620821 CCAGTTGTTGCACGCCATTCTTGCCTTAGTAGCTCCGAGATGATAATGCCACGCTAGCCCTC-TCCTTTCCCAGGGTTTCTAAGAACTTAGCACTC--TTGTGTATTAGGGGGTCTGTTTGCCATGTAAAGGCAGA-TCTTTGACATATCCACATACAGGA--TTTCTACTTCTGATAGCAAaaataaatacataaataaattcatcataaataata i cebCap1.NW_016107537v1 I 9 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=91371.000000 s hg38.chr14_KI270725v1_random 93354 25 + 172810 aatTGACTTAATG-------CATTGAACCTGT s panTro5.chrY 329830 25 + 26350515 aatTGACTTAATG-------CATTGAATCTGT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 3975 25 + 24701 aatTGACTTAATG-------CATTGAATCTGT i gorGor5.CYUI01005671v1 C 0 C 0 s macFas5.chr10 61764334 25 - 96509753 aattgacttaatg-------tatcaaatcagt i macFas5.chr10 C 0 I 3 s macNem1.NW_012014799v1 671532 25 + 11597128 AATTGACTTAATG-------TATCAAATCAGT i macNem1.NW_012014799v1 C 0 I 3 s cerAty1.NW_012001187v1 179940 25 + 5626091 AATTGACTTAATG-------TATCAAATCAGT i cerAty1.NW_012001187v1 C 0 I 8 s chlSab2.chr14 90926151 32 - 107702431 AATTGACTTAATGTATCAAATATCAAATCAGT i chlSab2.chr14 C 0 I 10 s manLeu1.NW_012101586v1 226745 25 + 521157 aattgacttaatg-------tatcaaatcagt i manLeu1.NW_012101586v1 C 0 I 1 s colAng1.NW_012118465v1 187530 25 + 1278784 aatTGACGTAATG-------TGCAGAATCTGT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90641706 25 - 108792865 AATTGACTTAATA-------TATCGAATCTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377186 25 - 3814455 AATTGACTTAACG-------TATCGAATCTAT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456545 11 + 3620821 aatTGACTTAA--------------------- i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e rheMac8.chr13 45314 24 - 108979918 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=282371.000000 s hg38.chr14_KI270725v1_random 93379 64 + 172810 AAAA-AAAAAATAAGGTCAGTTTGAGAGCTTAAAAGGAGCCTGATGAGGTTGAAAAGAC-AAATTA s panTro5.chrY 329855 62 + 26350515 AAAA-AAAAA--AAGGTCAGTTTGAGAGCTTAAAAGCAGCCTAATGAGGCTAAAAAGAC-AAATTA i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4000 62 + 24701 TTAA-AAAA---AAAGTCAGATTGAGAGCTTAAAAGGAGCCTGATGAGGTTGAAAAGACAAAATTA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45338 64 - 108979918 aaaa-aaaaaataaGATGAGTTTCAGAGCTTAAAAGGAATCTGATGAGGTTAAATAGAG-AAATTA i rheMac8.chr13 I 24 C 0 s macFas5.chr10 61764362 65 - 96509753 aaagaaaaaaaaaaGATGAGTTTCAGAGCTTAAAAGGAGTCTGATAAGGTTAAATAGAG-AAATTA i macFas5.chr10 I 3 C 0 s macNem1.NW_012014799v1 671560 64 + 11597128 AAAG-AAAAAAAAAGATGAGTTTCAGAGCTTAAAAGGAGTCTGATAAGGTTAAATAGAG-AAATTA i macNem1.NW_012014799v1 I 3 C 0 s cerAty1.NW_012001187v1 179973 64 + 5626091 aaaa-aaaaaaaaaGATGAGTTTCAGAGCTTAAAAGGAGTCTGATGAGGTTAAATAGAG-AAATTA i cerAty1.NW_012001187v1 I 8 C 0 s chlSab2.chr14 90926193 64 - 107702431 aaaa-aaaaaaaaaGATGAGTTTCAGAGCTTAAAAGGAGTCTGATGAGGTTAAATAGAG-AATTTA i chlSab2.chr14 I 10 C 0 s manLeu1.NW_012101586v1 226771 64 + 521157 aaaa-aaaaaaaaaGATGAGTTTAAGAGCTTAACAGGAATCTGATGAGGTTAAATAGAG-AAATTA i manLeu1.NW_012101586v1 I 1 I 28 s colAng1.NW_012118465v1 187555 61 + 1278784 ---A-AAAACGTAAGAACAGTTTAAGAGCTTAAAAGGAGTCTGATGAGGTTGAAAAGAC-AAATTA i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90641731 58 - 108792865 -------AAAGAAAGCTCAGTTTAAGAGCTTAAAAGGAGTCTGCAGAGGTTAAAAAGAC-AAATTA i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377211 58 - 3814455 -------GAAGAAAGATCAGTTTAAGAGCTTAAAAGGAGTCTGGGGAGGTTAAAAGGAC-AAATTA i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456556 48 + 3620821 -----------------CAGCTTAAGAGCTTAAAAGGAGTCTGGGGAGGTTAAAAAGAC-AAATTG i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=3036.000000 s hg38.chr14_KI270725v1_random 93443 1 + 172810 C s panTro5.chrY 329917 1 + 26350515 C i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4062 1 + 24701 C i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45402 1 - 108979918 C i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61764427 1 - 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671624 1 + 11597128 C i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180037 1 + 5626091 C i cerAty1.NW_012001187v1 C 0 I 51014 s chlSab2.chr14 90926257 1 - 107702431 C i chlSab2.chr14 C 0 C 0 s colAng1.NW_012118465v1 187616 1 + 1278784 C i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90641789 1 - 108792865 T i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377269 1 - 3814455 T i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456604 1 + 3620821 T i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e manLeu1.NW_012101586v1 226835 28 + 521157 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=129879.000000 s hg38.chr14_KI270725v1_random 93444 32 + 172810 CTTTAGTAAAGAGCAGTTGGAGCAATAGATGA s panTro5.chrY 329918 32 + 26350515 CTTTAGTAAAGAACAGTTGGAGAAATAGATGA i panTro5.chrY C 0 I 4 s gorGor5.CYUI01005671v1 4063 32 + 24701 CTTTAGTAAAGAGCAGTTAGAGCCATAGATGA i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45403 28 - 108979918 TTTCAGTGGAGGA----CAGAGCAACAGATGA i rheMac8.chr13 C 0 I 4 s macFas5.chr10 61764428 32 - 96509753 TTTCAGTGGAGGATAGTTAGAGCAACAGATGA i macFas5.chr10 C 0 I 5 s macNem1.NW_012014799v1 671625 32 + 11597128 TTTCAGTGGAGGATAGTTAGAGCAACAGATGA i macNem1.NW_012014799v1 C 0 I 4 s cerAty1.NW_012001187v1 231052 32 + 5626091 TTTCAGTGGAGGACAGTTAGAGCAACAGATGA i cerAty1.NW_012001187v1 I 51014 I 4 s chlSab2.chr14 90926258 32 - 107702431 TTTCAGTGGAGGATAGTTAGAGCAACAGATGA i chlSab2.chr14 C 0 I 4 s colAng1.NW_012118465v1 187617 28 + 1278784 TTTCAGTGAAGGA----CAGAACAACAGATGT i colAng1.NW_012118465v1 C 0 I 5 s calJac3.chr14 90641790 32 - 108792865 TTTCAGTGAAGGACAGTTAGTGCAACAGATGG i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377270 32 - 3814455 TTTCAGTGAAGGACAGTTAGTGCAACAGATGG i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456605 32 + 3620821 TTTCAGTGAAGGACAGTTAGTGCAACGGATAG i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e manLeu1.NW_012101586v1 226835 28 + 521157 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=498328.000000 s hg38.chr14_KI270725v1_random 93476 108 + 172810 -TTCTTT----AATCAAGGACATTTT-AAGAGTAATCATCAAATGGT--AAATAA-AACTTGAAATAAGATGATA-AAATATAATCTTATATGC-AAAAAAAATTTCCAAGAACCAGAG s panTro5.chrY 329954 108 + 26350515 -TTCTTT----AATCAATTACATTTT-AATAGTAATTATCAAATGGT--AAATAA-AACTTGAAATAAGCTGATG-AAATATAATTTTATATGC-AAAAAATATTTCCAAGAACCATAC i panTro5.chrY I 4 C 0 s gorGor5.CYUI01005671v1 4095 108 + 24701 -TTCTTT----AATCAAGGACATTTT-AAGAGTAATTATCAAACGGT--AAATAA-AACTTGAAATAAGCTGATA-AAATGTAATTTTATATGC-AAAAAAAATTTCCAAGAACCATAC i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45435 108 - 108979918 -TTTTTA----AATCGATGACATTTT-GGGAGTAATTATCATATGCT--AAATAACAACTTGAAATAAGCTTCTA-AAATATAA-TTTATACTC-AAAAATTATTTCCAAGGATCATAC i rheMac8.chr13 I 4 C 0 s macFas5.chr10 61764465 111 - 96509753 -TTTTTT----AATCAATGACATTTTGGGGAGTAATTATCATATCGT--AAATAACAACTTGAAATAAGATGCTA-AAATATAATTTTATAATCAAAAAATTATTTCCAAGTATCACAT i macFas5.chr10 I 5 C 0 s macNem1.NW_012014799v1 671661 111 + 11597128 -TTTTTT----AATCAATGACATTTTGGGGAGTAATTATCATATCGT--AAATAACAACTTGAAATAAGATGCTA-AAATATAATTTTATAATCAAAAAATTATTTCCAAGTATCACAT i macNem1.NW_012014799v1 I 4 C 0 s cerAty1.NW_012001187v1 231088 108 + 5626091 -TTTTTA----AATCGATGACATTTT-GGGAGTAATTATCATATGCT--AAATAACAACTTGAAATAAGCTTCTA-AAATATAA-TTTATACTC-AAAAATTATTTCCAAGGATCATAC i cerAty1.NW_012001187v1 I 4 T 51053 s chlSab2.chr14 90926294 111 - 107702431 -TTTTTT----AATCAATGACATTTTGGGGAGTAATTATCATATCGT--AAATAACAACTTGAAATAAGCTGCTA-AAATATAATTTTATAATCAAAAAATTATTTCCAAGTATCACAT i chlSab2.chr14 I 4 C 0 s manLeu1.NW_012101586v1 226863 109 + 521157 -TTTTTT----AATTGACGACATTTT-GGGAGTAATTATCATATGGT--AAATAACAACTTGAAATAAGCTGCTA-AAATACAATTTTATACTC-AAACATTATTTCCAAGAATCATAT i manLeu1.NW_012101586v1 I 28 C 0 s colAng1.NW_012118465v1 187650 112 + 1278784 -TTTTTT----AATTGATGGCATTTT-AGGAGTCATTATCAAAACGTAAAAATAACAATTTGAAATAATGTGCTA-AAACATAATTTTATAATCAACAAAATATTTCCAAGAGTCATAT i colAng1.NW_012118465v1 I 5 C 0 s calJac3.chr14 90641822 113 - 108792865 CTTTTTTAAAAAAT---CAACATTTT-AGGAGTAATTATCAAACAGT--AAATAACAACTTGAAATAAGCTGCTATACATATAATCTTATAGTCAAAAATTTATTTCCAAGAATCCTAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377302 116 - 3814455 CTTTTTTAAAAAATCAACAACATTTT-AGTAGTAATTATCAAACAGT--AAATAATAACTTGAAATAAGCTGCTATAAATATAATTTTATAGTCAAAAATTTATTTCCAAGAATCCTAT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456637 116 + 3620821 CTTTTTAAAAAAATCAACAACATTTT-AGGAGTAATTATCAAACAGT--AAATAACAACTTGAAATAAGCTGCTATAAATATAATTTTATAGTCAAAAATTTATTTCCAAGAACCCTGT i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=820095.000000 s hg38.chr14_KI270725v1_random 93584 151 + 172810 AAATACATTTTCAGATTAAAACAAAC-AAAAAATGTGGGTTTATCATCAGATCCGCTAAATGGAAGATTCCTCAAATG----TGTGCTTGGAGCAAAAATAACACTTA--TCCCTATTTGAAAGTTCAAGATTTTT-GAGCTTTAGAAGAAAACAGTTT s panTro5.chrY 330062 151 + 26350515 AAATACATTTTCAGATTAAAACAAAC-AAAAAATGTGGGTTTATCATCAGATCCGCTAAATGGAAGATTTCTCACATG----TGTGCTGGGAGCAAAAATAACACTTA--TCCCTATTTGAAAGTTCAAGATTTTT-CAGCTTTAGAAGAAAACAGCTT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4203 147 + 24701 AAATACATTTTGAGATTA----AAAC-AAAAAATGTGGGTTTATCATCAGATCCGCTAAATGGAAGATTTCTCAAATG----TGTGCTTCGAGCAAAAATAGCACTTA--TCCCTATTTGAAAGTTCAAGATTTTT-GAGCTTTAGAAGAAAACAGCTT i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45543 151 - 108979918 AAATACATTTTCAGATTAAAGCATAC-AAAAAATGTGGGTTTATCATCAGGTGCACTCAGTGGAAGATTTCTCAAATG----TGTACTTGGAGCAAAAATAACATTTA--TTTCTATTTGCAAGTTCAAGATTTTT-GATCTTTAGAAGAAAACAGCTT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61764576 149 - 96509753 AAATACATTTTCCGATTAAAAC--AC-AAAGAATGTGGGTTTATCATCAGGTCCATCCAATGGAAGACTTCTCAAATG----TGTACTTGGAGCAAAAATTACATTTA--CTTCTATTTGCAAGTTCAAGATTTTT-GATCTTTGGAAGAAAACAACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671772 149 + 11597128 AAATACATTTTCCGATTAAAAC--AC-AAAGAATGTGGGTTTATCATCAGGTCCATCCAATGGAAGACTTCTCAAATG----TGTACTTGGAGCAAAAATTACATTTA--CTTCTATTTGCAAGTTCAAGATTTTT-GATCTTTGGAAGAAAACAACTT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180143 147 + 5626091 AAATATATTTTCCGATTAAAAC--AC-AC--AATGTGGGTTTATCATCAGGTCCATCCAATGGAAGACTTCTCAAATG----TGTACTTGGAGCAAAAATTGCATTTA--CTTCTATTTGCAAGTTCAAGATTTTT-GATCTTTAGAAGAAAACAACAT i cerAty1.NW_012001187v1 T 51053 C 0 s chlSab2.chr14 90926405 151 - 107702431 AAATACATTTTCCTATTAAAACACAC-AAAAATTGTGGGTTTATCATCAGGTCCATCCAATGGAAGACTTCTCAAATG----TGTACTTGGAGCAAAAATTTTATTTA--CTTCTATTCGCAAGTTCAAGATTTTT-GATCTTTAGAAGAAAACAACAT i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 226972 152 + 521157 AAATACATTTTCCGATTAAAAGACACAAAAAAATGTGGGTTTATCATCAGGTGCACTCAATGGAAGATTTCTCAAATG----TGTACTTGGAACAAAAATAACATTTA--TTTCTATTTGCAAGTTCAAGATTTTT-GATCTTTAGAATAAAACAACTT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 187762 155 + 1278784 AGATACATTTTCAGGTTAAAAT--AG-AAAAAATGTGAGTTTATCATCAGATCCACTCAATGGAAGATTTCTCAAATGTGTATGTACATGGAGCAAAAATAGCATTTATTTTTCTATTTGCCAGTTCAAGATTTTT-GATCTTTAGAAGAAAACAGCTT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90641935 152 - 108792865 AAATACATTTTCAGGTTAAAACAAAC-AAAATATGTGGGTTTATCATCAGATCAGCTCAATGGAAGGTTTTTCAAATG----TGTGCTTGAGGCAAAAAGAACATTTA--TCTCTATTTGAAAGTTCAAGCTTTTTTGATCTGTAGAAGAAAACAGCTT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377418 152 - 3814455 AAATACATTTTCAGGTTAAAACAAAC-AAAATATGTGGGTTTATCATCAGATCAGCTCAATGGAAGGTTTCTCAAATG----TGCGCTTGAGGCAAAAAGAACATTTA--TCTCTATTTGAAAGTTCAAGCTTTTTTGATCTTTAGAAGAAAACAGCTT i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456753 152 + 3620821 AAATACATTTTCAGGTTAAAACAAAC-AAAATATGTGGGTTTATCATCAGGTCAGCTCAATGGAAGGTTTCTCAAATG----TGTGCTTGAGGCAAAAAGAACATTTA--TCTCTATTTGAAAGTTCAAGTTTTTTGGATCTTTAGAAGAAAACAGCTT i cebCap1.NW_016107537v1 C 0 C 0 e tarSyr2.KE938805v1 14315 587 + 186790 I e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=1118.000000 s hg38.chr14_KI270725v1_random 93735 1 + 172810 -T s panTro5.chrY 330213 1 + 26350515 -T i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4350 1 + 24701 -T i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45694 1 - 108979918 -T i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61764725 1 - 96509753 -T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671921 1 + 11597128 -T i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180290 1 + 5626091 -T i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90926556 1 - 107702431 -T i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 227124 1 + 521157 -T i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 187917 1 + 1278784 -T i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90642087 1 - 108792865 -T i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377570 1 - 3814455 -T i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456905 1 + 3620821 -T i cebCap1.NW_016107537v1 C 0 C 0 s tarSyr2.KE938805v1 14902 1 + 186790 G- i tarSyr2.KE938805v1 I 587 N 0 e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=129496.000000 s hg38.chr14_KI270725v1_random 93736 21 + 172810 CCCTTCACTCTGTTCCACTCA- s panTro5.chrY 330214 20 + 26350515 CCCTTCACTCTGTTCCACTC-- i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4351 20 + 24701 CCCTTCACTCTGTTCCACTC-- i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45695 20 - 108979918 CCCTTCACTCTGTTCCACTC-- i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61764726 20 - 96509753 CCCTTCACTCTGTTCCACTC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671922 20 + 11597128 CCCTTCACTCTGTTCCACTC-- i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180291 20 + 5626091 CCCTTCACTCTGTTCCACTC-- i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90926557 20 - 107702431 CCCTTCACTCTGTTCCACTC-- i chlSab2.chr14 C 0 C 0 s manLeu1.NW_012101586v1 227125 20 + 521157 CCGTTCACTCTGTTCCACTC-- i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 187918 20 + 1278784 CGTTTCACTCTGTTCCACTC-- i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90642088 20 - 108792865 CCCTTCACTCTGTTCCACTC-- i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377571 20 - 3814455 CCCCTCACTCTGTTCCATTC-- i saiBol1.JH378265 C 0 C 0 s cebCap1.NW_016107537v1 456906 21 + 3620821 CCCTTCACTCTGTTCCACTC-A i cebCap1.NW_016107537v1 C 0 N 0 e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=77270.000000 s hg38.chr14_KI270725v1_random 93757 14 + 172810 ATGCTTCTGAGGAT s panTro5.chrY 330234 14 + 26350515 ACGCTTCTGAGGAT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4371 14 + 24701 ACGCTTCTAAGGAT i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45715 14 - 108979918 ATGCTGCTGAGGAT i rheMac8.chr13 C 0 C 0 s macFas5.chr10 61764746 14 - 96509753 ATGCTTCTGAGGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671942 14 + 11597128 ATGCTTCTGAGGAT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180311 14 + 5626091 ATGCTTCTGAGGAT i cerAty1.NW_012001187v1 C 0 C 0 s chlSab2.chr14 90926577 14 - 107702431 ATGCTTCTGAGGAT i chlSab2.chr14 C 0 N 0 s manLeu1.NW_012101586v1 227145 14 + 521157 ATGCTTCTGAGGAT i manLeu1.NW_012101586v1 C 0 C 0 s colAng1.NW_012118465v1 187938 14 + 1278784 ATGCTGCTGAGGAT i colAng1.NW_012118465v1 C 0 C 0 s calJac3.chr14 90642108 14 - 108792865 ATGCTGCTGAGGAT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377591 14 - 3814455 ATGCTGCTGAGGAT i saiBol1.JH378265 C 0 C 0 e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=3250.000000 s hg38.chr14_KI270725v1_random 93771 1 + 172810 G s panTro5.chrY 330248 1 + 26350515 C i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4385 1 + 24701 G i gorGor5.CYUI01005671v1 C 0 C 0 s rheMac8.chr13 45729 1 - 108979918 G i rheMac8.chr13 C 0 N 0 s macFas5.chr10 61764760 1 - 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671956 1 + 11597128 G i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180325 1 + 5626091 G i cerAty1.NW_012001187v1 C 0 C 0 s manLeu1.NW_012101586v1 227159 1 + 521157 G i manLeu1.NW_012101586v1 C 0 N 0 s colAng1.NW_012118465v1 187952 1 + 1278784 G i colAng1.NW_012118465v1 C 0 N 0 s calJac3.chr14 90642122 1 - 108792865 G i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377605 1 - 3814455 G i saiBol1.JH378265 C 0 C 0 e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=5246.000000 s hg38.chr14_KI270725v1_random 93772 5 + 172810 GCCAT s panTro5.chrY 330249 5 + 26350515 ACCAT i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4386 5 + 24701 GCCAT i gorGor5.CYUI01005671v1 C 0 C 0 s macFas5.chr10 61764761 5 - 96509753 GCCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014799v1 671957 5 + 11597128 GGCGT i macNem1.NW_012014799v1 C 0 C 0 s cerAty1.NW_012001187v1 180326 5 + 5626091 GGCAT i cerAty1.NW_012001187v1 C 0 C 0 s calJac3.chr14 90642123 5 - 108792865 GATGT i calJac3.chr14 C 0 C 0 s saiBol1.JH378265 2377606 5 - 3814455 AGCAT i saiBol1.JH378265 C 0 C 0 e nomLeu3.chrUn_GL397743_2 74186 0 + 112108 I a score=14400.000000 s hg38.chr14_KI270725v1_random 93777 4 + 172810 GGGG s panTro5.chrY 330254 4 + 26350515 GGGG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01005671v1 4391 4 + 24701 GGGG i gorGor5.CYUI01005671v1 C 0 C 0 s nomLeu3.chr7b 114532168 4 + 115148730 GGGG i nomLeu3.chr7b I 44409 C 0 s macFas5.chr10 61764766 4 - 96509753 GGGG i macFas5.chr10 C 0 N 0 s macNem1.NW_012014799v1 671962 4 + 11597128 GGGG i macNem1.NW_012014799v1 C 0 N 0 s cerAty1.NW_012001187v1 180331 4 + 5626091 GGGG i cerAty1.NW_012001187v1 C 0 N 0 s calJac3.chr14 90642128 4 - 108792865 GGGG i calJac3.chr14 C 0 N 0 s saiBol1.JH378265 2377611 4 - 3814455 GGGG i saiBol1.JH378265 C 0 N 0 a score=4530.000000 s hg38.chr14_KI270725v1_random 93781 8 + 172810 CAAAAAGC s panTro5.chrY 330258 8 + 26350515 CAAAAAGC i panTro5.chrY C 0 I 56 s gorGor5.CYUI01005671v1 4395 8 + 24701 CAAAAAGC i gorGor5.CYUI01005671v1 C 0 N 0 s nomLeu3.chr7b 114532172 8 + 115148730 CAAAAAGC i nomLeu3.chr7b C 0 C 0 a score=666.000000 s hg38.chr14_KI270725v1_random 93789 32 + 172810 ---GGCGTC----------GGCGGGGGGGGGCAAAAAGCCGGGGC s nomLeu3.chr7b 114532180 45 + 115148730 CGCGGCGTTAAAAAGCCATGGCGGCGGGCGTAAAAAGACCTGGTC i nomLeu3.chr7b C 0 C 0 e panTro5.chrY 330266 56 + 26350515 I a score=6304.000000 s hg38.chr14_KI270725v1_random 93821 33 + 172810 ----GGGCAAAAAGCCGCGGC------GCCAAAAAGCCGCGGC s gorGor5.CYUI01000341v1 1925 33 - 150013 ----GGGCAAAAAGCCGCAGC------GGCAAAAAGCTGCGGC i gorGor5.CYUI01000341v1 N 0 I 90 s nomLeu3.chr7b 114532225 43 + 115148730 GCGGGGGCAAAAAGCTGCGGCTGCAGGGCCAAATAGCCACGGC i nomLeu3.chr7b C 0 C 0 e panTro5.chrY 330266 56 + 26350515 I a score=389.000000 s hg38.chr14_KI270725v1_random 93854 31 + 172810 ----------------------------GGCGAGGGAGGGAAAAGCC-----------GCGGCGGCGGGC s nomLeu3.chr7b 114532268 70 + 115148730 TGCGGGGGGAAAAAGCGGCAAAAAGACAGGTGGGGGGGCAAAAAGCCACTAAAAGCAAGCGGCGGCGAGG i nomLeu3.chr7b C 0 C 0 e gorGor5.CYUI01000341v1 1958 90 - 150013 I e panTro5.chrY 330266 56 + 26350515 I a score=4463.000000 s hg38.chr14_KI270725v1_random 93885 20 + 172810 GGCAAAAAGCCGCGACGTCG s gorGor5.CYUI01000341v1 2048 20 - 150013 GGCAAAAAGCCCCGGCGGCG i gorGor5.CYUI01000341v1 I 90 C 0 s nomLeu3.chr7b 114532338 20 + 115148730 GGCAAAAAGCCGCGGCGGCA i nomLeu3.chr7b C 0 C 0 e panTro5.chrY 330266 56 + 26350515 I a score=13039.000000 s hg38.chr14_KI270725v1_random 93905 27 + 172810 GGGGGCAAAAAGCCGCGGCAGCGGGGG s gorGor5.CYUI01000341v1 2068 27 - 150013 GGGAGCAAAAAGCCGCGGCGGCGGGGA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665085 27 + 72422247 GGGGGCAAAAAGCCGCGGCGGCGGGAG i ponAbe2.chrUn N 0 C 0 s nomLeu3.chr7b 114532358 27 + 115148730 GAGGGCAAAAAGCCATGGCAGCGGGGG i nomLeu3.chr7b C 0 N 0 e panTro5.chrY 330266 56 + 26350515 I a score=2141.000000 s hg38.chr14_KI270725v1_random 93932 13 + 172810 TGCAAAAAGCCGC s gorGor5.CYUI01000341v1 2095 10 - 150013 ---GAAAAGCCGC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665112 11 + 72422247 --CAAAAAGCCGC i ponAbe2.chrUn C 0 I 290 e panTro5.chrY 330266 56 + 26350515 I a score=869.000000 s hg38.chr14_KI270725v1_random 93945 10 + 172810 GGCAGCGGGG s gorGor5.CYUI01000341v1 2105 10 - 150013 GGCGGCGGGG i gorGor5.CYUI01000341v1 C 0 I 308 e ponAbe2.chrUn 5665123 290 + 72422247 I e panTro5.chrY 330266 56 + 26350515 I a score=0.000000 s hg38.chr14_KI270725v1_random 93955 152 + 172810 GTGCAAAAAGCCGCGGCAGCGAGGGTGCAAAAAGCCGCGGCAGCGGGGGTGCAAAAAGCCGCGGCAGCGGGGGTGCAAAAAGCCGTGGCAGGGAGGGGCAAAAAGCCGTGGTGGGCAAAAAGCCGCGGCAGCGGGGGGCGAAAAGCCGCGGC e ponAbe2.chrUn 5665123 290 + 72422247 I e gorGor5.CYUI01000341v1 2115 308 - 150013 I e panTro5.chrY 330266 56 + 26350515 I a score=7886.000000 s hg38.chr14_KI270725v1_random 94107 28 + 172810 GGGCAAGAAGCCGCGGCGGCAAAAAGCC s gorGor5.CYUI01000341v1 2423 28 - 150013 GGGCAAAAAGCCGCGGCGGCAAAAAGCC i gorGor5.CYUI01000341v1 I 308 I 336 s ponAbe2.chrUn 5665413 28 + 72422247 GGGCAAAAAGCCGCGGCGGCAAAAAGCC i ponAbe2.chrUn I 290 I 160 e panTro5.chrY 330266 56 + 26350515 I a score=0.000000 s hg38.chr14_KI270725v1_random 94135 153 + 172810 ACCGCGCGGGGAGGAAAAAGCCGTGGCGGGCAAAAATCCGCGGAAGCAAAAAGCCTCGGCGCGGAAAAGACCGCGGCGGCGGGGGTGCAAAAAGTCGCGCCTGGCAAAAAGCCGCAGCGGCGGGGGGAACAAGCCGCGGCGGGCAGAAAGGCT e ponAbe2.chrUn 5665441 160 + 72422247 I e gorGor5.CYUI01000341v1 2451 336 - 150013 I e panTro5.chrY 330266 56 + 26350515 I a score=200.000000 s hg38.chr14_KI270725v1_random 94288 2 + 172810 CG s ponAbe2.chrUn 5665601 2 + 72422247 CG i ponAbe2.chrUn I 160 C 0 e gorGor5.CYUI01000341v1 2451 336 - 150013 I e panTro5.chrY 330266 56 + 26350515 I a score=1800.000000 s hg38.chr14_KI270725v1_random 94290 6 + 172810 GCGGCG s gorGor5.CYUI01000341v1 2787 6 - 150013 GCGGCG i gorGor5.CYUI01000341v1 I 336 C 0 s ponAbe2.chrUn 5665603 6 + 72422247 GCGGCG i ponAbe2.chrUn C 0 C 0 e panTro5.chrY 330266 56 + 26350515 I a score=8404.000000 s hg38.chr14_KI270725v1_random 94296 16 + 172810 GGGGGCAAAAAGCCGC s panTro5.chrY 330322 16 + 26350515 GGGGGCAAAAAGCCGT i panTro5.chrY I 56 C 0 s gorGor5.CYUI01000341v1 2793 16 - 150013 GGGAGCAAAAAGCCGC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665609 16 + 72422247 GGGAGCAAAAAGCCGC i ponAbe2.chrUn C 0 I 176 a score=600.000000 s hg38.chr14_KI270725v1_random 94312 2 + 172810 GG s panTro5.chrY 330338 2 + 26350515 GG i panTro5.chrY C 0 C 0 s gorGor5.CYUI01000341v1 2809 2 - 150013 GG i gorGor5.CYUI01000341v1 C 0 I 879 e ponAbe2.chrUn 5665625 176 + 72422247 I a score=1555.000000 s hg38.chr14_KI270725v1_random 94314 30 + 172810 TGGAGAGGGGGCAAAAATCCGCGACGACGC s panTro5.chrY 330340 30 + 26350515 CGGCGTGGGGGCAAAAAGCCGCGGCGGCAG i panTro5.chrY C 0 C 0 e ponAbe2.chrUn 5665625 176 + 72422247 I e gorGor5.CYUI01000341v1 2811 879 - 150013 I a score=4476.000000 s hg38.chr14_KI270725v1_random 94344 5 + 172810 GGGGC s panTro5.chrY 330370 5 + 26350515 AGGGC i panTro5.chrY C 0 C 0 s panPan2.chr7 74641062 5 + 162613886 GGGGC i panPan2.chr7 N 0 C 0 s gorGor5.CYUI01000341v1 3690 5 - 150013 GGGGC i gorGor5.CYUI01000341v1 I 879 C 0 s ponAbe2.chrUn 5665801 5 + 72422247 ggggc i ponAbe2.chrUn I 176 C 0 a score=44394.000000 s hg38.chr14_KI270725v1_random 94349 17 + 172810 AAAATAGTGGATCTGGT s panTro5.chrY 330375 17 + 26350515 AAAATAGTGGAGATGGG i panTro5.chrY C 0 C 0 s panPan2.chr7 74641067 17 + 162613886 AAAATAGTGGAAATGGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3695 17 - 150013 AAAATAGTGGAGATGGG i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665806 17 + 72422247 AAAATAGTGGAAATGGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104821 17 - 99891981 AAAATAGTGGAAATGGA i nomLeu3.chr17 N 0 C 0 s macFas5.chr3 124981432 17 - 192294377 AAAATAGTGGAAACGGG i macFas5.chr3 N 0 C 0 s calJac3.chr8 20041124 17 + 128169293 AAAATAGTGGAAAAAGG i calJac3.chr8 N 0 C 0 s saiBol1.JH378145 17626796 17 + 18371965 AAAATAGTGGAATTAGG i saiBol1.JH378145 N 0 C 0 a score=42903.000000 s hg38.chr14_KI270725v1_random 94366 11 + 172810 GTAGAAGGCCG s panTro5.chrY 330392 11 + 26350515 GTAGAAGGCCA i panTro5.chrY C 0 C 0 s panPan2.chr7 74641084 10 + 162613886 GAAGAAGG-CG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3712 11 - 150013 GTAGAAGGCCC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665823 11 + 72422247 GTAGAAGGCCG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104838 11 - 99891981 GTAGAAGGCCC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 124981449 11 - 192294377 GTAGAGAGCCT i macFas5.chr3 C 0 C 0 s chlSab2.chr21 121502371 11 - 127223203 GTAGAAAGCCT i chlSab2.chr21 N 0 C 0 s colAng1.NW_012115910v1 5169357 11 - 6934359 GTAGAAAGCCT i colAng1.NW_012115910v1 N 0 C 0 s calJac3.chr8 20041141 11 + 128169293 GTAGAAGGACT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17626813 11 + 18371965 GTAGAAGGACT i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7360408 11 + 9267652 GTAGAAGGACT i aotNan1.NW_018514471v1 N 0 C 0 a score=112650.000000 s hg38.chr14_KI270725v1_random 94377 11 + 172810 GCACAGCTTGG s panTro5.chrY 330403 11 + 26350515 GCAGAGCTTGG i panTro5.chrY C 0 C 0 s panPan2.chr7 74641094 11 + 162613886 GCACAGCTTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3723 11 - 150013 GCACAGCTTGG i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665834 11 + 72422247 GCACAGCTTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104849 10 - 99891981 GTA-AGCTTGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52335766 11 + 185818997 GCACAGCTTGG i rheMac8.chr3 N 0 C 0 s macFas5.chr3 124981460 11 - 192294377 GCACAGCTTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 328678 11 - 3123512 GCACAGCTTGG i macNem1.NW_012011522v1 N 0 C 0 s cerAty1.NW_012000909v1 7562197 11 - 10077455 GCACAGCTTGG i cerAty1.NW_012000909v1 N 0 C 0 s chlSab2.chr21 121502382 11 - 127223203 GCACAGCTTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611166 11 + 1799296 GCACAGCTTGG i manLeu1.NW_012105809v1 N 0 C 0 s colAng1.NW_012115910v1 5169368 11 - 6934359 GCACAGCTTGG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041152 11 + 128169293 GCACAGCTTGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17626824 11 + 18371965 GCACAGCTTGA i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7360419 11 + 9267652 GCACAGCTTGG i aotNan1.NW_018514471v1 C 0 C 0 a score=354558.000000 s hg38.chr14_KI270725v1_random 94388 36 + 172810 CATTGCTGGAGTGTGATGAGATAGGAAATGTGCAGC s panTro5.chrY 330414 36 + 26350515 CATTGCTGGAGTGTGATGTGATAGGAAATGTGCAGC i panTro5.chrY C 0 C 0 s panPan2.chr7 74641105 35 + 162613886 CATTGCTGGAGTGTGATGTGATAGGAAA-GTGCAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3734 36 - 150013 CATTGCTGGAGTGTGATGTGATAGGAAAAGTGCAGC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665845 36 + 72422247 CATTGCTGGAGTGTGAGGTGATAGGAAAAGTGCAGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104859 36 - 99891981 CATTGCTGGATTGTGATGTGGAAGGAAAAGTGCAGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52335777 36 + 185818997 CACTGCTGGAGTGTGATGTGGAAGGAAAAGTGCAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124981471 36 - 192294377 CACTGCTGGAGTGTGATGTGGAAGGAAAAGTGCAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 328689 36 - 3123512 CACTGCTGGAGTGTGATGTGGAAGGAAAAGTGCAGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7562208 36 - 10077455 CACTACTGGAGTGTGATGTGGAAGGAAAAGTGCAGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121502393 36 - 127223203 CACTGCCGGAGTGTGATGTGGAAGGAAAAGTGCAGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611177 36 + 1799296 CACTGCTGGAGTGTGATGTGGAAGGAAAAGTGCAGC i manLeu1.NW_012105809v1 C 0 I 21 s colAng1.NW_012115910v1 5169379 36 - 6934359 CACTGCTGGAGTGTGATGTGGAAGAAAAAGTGCAGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041163 36 + 128169293 CATTGCTGGAGTGTGATGTGGAAGGAAAAGTGAAGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17626835 36 + 18371965 CATTGTTGGAGTGTGACTTGGAAGGAAAAGTGAAGC i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7360430 36 + 9267652 CATTGCTGGAGTGTGATGTGGAAGGAAAAGTGAAGC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4067606 35 + 55844845 CATTCCTAGAATATGATATGGAAAGAGGGGTCTGG- i canFam3.chr18 N 0 C 0 a score=50996.000000 s hg38.chr14_KI270725v1_random 94424 7 + 172810 CAAAGAC s panTro5.chrY 330450 7 + 26350515 CAAAGAC i panTro5.chrY C 0 C 0 s panPan2.chr7 74641140 7 + 162613886 CGAAGAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3770 7 - 150013 TGAAGAC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665881 7 + 72422247 CGAAGAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104895 7 - 99891981 AGAAGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52335813 7 + 185818997 AGAAGAC i rheMac8.chr3 C 0 I 9 s macFas5.chr3 124981507 7 - 192294377 AGAAGAC i macFas5.chr3 C 0 I 9 s macNem1.NW_012011522v1 328725 7 - 3123512 AGAAGAC i macNem1.NW_012011522v1 C 0 I 8 s cerAty1.NW_012000909v1 7562244 7 - 10077455 AGAAGAC i cerAty1.NW_012000909v1 C 0 I 7 s chlSab2.chr21 121502429 7 - 127223203 AGAAGAC i chlSab2.chr21 C 0 I 8 s colAng1.NW_012115910v1 5169415 7 - 6934359 AGAAGAC i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 20041199 7 + 128169293 GGAAGGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17626871 7 + 18371965 AGAAGGT i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7360466 7 + 9267652 AGAAGGC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4067641 5 + 55844845 --GAGAC i canFam3.chr18 C 0 C 0 e manLeu1.NW_012105809v1 611213 21 + 1799296 I a score=142303.000000 s hg38.chr14_KI270725v1_random 94431 16 + 172810 AAAAAAAGATGTAAGT s panTro5.chrY 330457 16 + 26350515 AAAAAAAGATGTAAGT i panTro5.chrY C 0 C 0 s panPan2.chr7 74641147 16 + 162613886 AAACAAAGATGTAAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3777 15 - 150013 AAA-AAAGATGTAAGT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665888 16 + 72422247 AAAAAAAGATGTAAGT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104902 16 - 99891981 AAAAAAAGATGCAAGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52335829 16 + 185818997 AAAAAAAGATGTTAGT i rheMac8.chr3 I 9 C 0 s macFas5.chr3 124981523 16 - 192294377 AAAAAAAGATGTAAGT i macFas5.chr3 I 9 C 0 s macNem1.NW_012011522v1 328740 16 - 3123512 AAAAAAAGATGTAAGT i macNem1.NW_012011522v1 I 8 C 0 s cerAty1.NW_012000909v1 7562258 16 - 10077455 AAAAAAAGATGTAAGC i cerAty1.NW_012000909v1 I 7 C 0 s chlSab2.chr21 121502444 16 - 127223203 aaaaaaaaaTGTAAGC i chlSab2.chr21 I 8 C 0 s manLeu1.NW_012105809v1 611234 16 + 1799296 aaaaaaaGATGTAAGC i manLeu1.NW_012105809v1 I 21 C 0 s colAng1.NW_012115910v1 5169424 16 - 6934359 AAAAAGAGATGTAAGC i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 20041206 15 + 128169293 -AGAAAAGATGTGAGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17626878 15 + 18371965 -GAAAAAGATGTAAGC i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7360473 15 + 9267652 -AAACTCGATGTGAGT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4067646 16 + 55844845 TGAAAAAGATGCAGGT i canFam3.chr18 C 0 C 0 a score=2512690.000000 s hg38.chr14_KI270725v1_random 94447 257 + 172810 AGGCTTGA--CTCATTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTTTTAACTAATAAGCAGTTTAAATC---AGAATGGCACATTCTGATTT-TTTTTTATATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAAAGAGAAAAGTCAGTAGATAGAGGTAACAAACTTAAATATGTGCCGAGTCTAGAAACAAGAGACTAG-----GGAGATAAGGACCTTTGGAAATAAAAT-------------------------------GAAAGATTTGAAAACTG----GCTG-GGGGATGAG s panTro5.chrY 330473 262 + 26350515 AGGCTTGA--CTCATTGGAGCTAAGAAACCAGA-TGTTACCTTGAGGGTATTAACTAATAAGCAGTTTAAATC---AGAATGGCACATTCTGATTTGTTTTTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGAAAAGTCAGTAGATAGAGGGAACAAACTTAAATATGTGCCAAGTCTAGAAACAAGAGACCAG-----GGGGATAAGGACCTTTCAAAATAAAAT-------------------------------GCAAGATTTGAAAACTGATTGGCTC-GGTGATGAG i panTro5.chrY C 0 C 0 s panPan2.chr7 74641163 262 + 162613886 AGGCTTAA--CTCAGTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTATTAACTAAAAAGCAGTTTAAATC---AGAATGGCACATTCTGATTTGGTTTTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAAGAAACTCAGTAGATAGAGGTAACAAACTTAAATATGTGCCAAGTCTAGAAACAAGAGACTAG-----GGGGATAAGGATCTTTCAAAATAAAAT-------------------------------GCCAGATTTGAAAACTGATTGGCTG-GGGGATGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 3792 252 - 150013 AGGCTTGA--CTCATTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTATTAACTAATAAGCAGTTTAAATC---AGAATGGCACATTCTGTTTT----TTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATAGAGGTTAC------AAATATGTGCCAAGTCTAGAAACAAGAGACTAG-----GGGAATAAGGACCTTTCAAAATAAAAT-------------------------------GGAAGATTTGAAAACTGATTGGCTG-GGGGATGAG i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5665904 256 + 72422247 AGACTTGA--CTCCGTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTATTAACTAATAAGCAGTTTAAATC---AGAATGGCACATTCTGATTTGTTTTTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATA----TAACAAACTTAAATATGTGCCAAGTCTAGAAAC--GAGACTAG-----GGGGATAAGGACCTTTCCAAATAAAAT-------------------------------GCAAGATTTGAAAACTGATTGGCTG-GGGGATGAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44104918 243 - 99891981 AGGCTTTA--CTCAGTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTGTTAACTAATAAGCAGC-------------------CATTCTGATTTGTTTTTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAC-CGAGGAAAGTCAGTAGATAGAGGTAACAAAGTTAGATATGTGCCAAGTCTAGAAACAAGAGACT-G-----GGGGATAATGA-CTTTCAAAATGAAAT-------------------------------GCAAGATTTGAAAACTGATTGGCTG-GAGAATGAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52335845 262 + 185818997 AGGCTTGA--CTCAGCGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTGTTAACTAATAAGCAGTTTAAATC---AGAATGTCAGATTCTGATTTGTTTTTCGTACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATAGAGGTAACAAACTTAGATATGTGCCAAGTCTAGAAACAAGAGACTGG-----GGGGATAACGACCTTTCGAAATAAAAT-------------------------------GTAATATTTGAAAGATGATTGGCTG-GGGGATGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124981539 262 - 192294377 AGGCTTGA--CTCAGCGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTGTTAACTAATAAGCAGTTTAAATC---AGAATGTCAGATTCTGATTTGTTTTTCGTACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATAGAGGTAACAAACTTAGATATGTGCCAAGTCTAGAAACAAGAGACTGG-----GGGGATAACGACCTTTCGAAATAAAAT-------------------------------GTAATATTTGAAAGCTGATTGGCTG-GAGGATGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 328756 262 - 3123512 AGGCTTGA--CTCAGCGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTGTTAACTAATAAGCAGTTTAAATC---AGAATGTCAGATTCTGATTTGTTTTTCGTACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATAGAGGTAACAAACTTAGATATGTGCCAAGTCTAGAAACAAGAGACTGG-----GGGGATAACGACCTTTCGAAATAAAAT-------------------------------GTAATATTTGAAAGCTGATTGGCTG-GGGGATGAG i macNem1.NW_012011522v1 C 0 I 202 s cerAty1.NW_012000909v1 7562274 262 - 10077455 AGGCTTGA--CTAAGTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTGTTAACTAATAAGCAGTTTAAATC---AGAATGTCAGATTCTGATTTGTTTTTCGTACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATAGAGGTAACAAACTTAGATATGTGCCAAATCTAGAAACAAGAGACTGG-----GGGGATAATGACCTTTCGAAATAAAAT-------------------------------GTAATATTTGAAAATTGATTGGCTG-GGGGATGAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121502460 262 - 127223203 AGGCTTGA--CTCAGTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGATGTTCACTAATAAGCAGTTTAAATC---AGAATGTCAGATTCTGATTTGTTTTCCGCACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CCGTTTGAAGAGACGAAAGTCAGTAGATAGAGGTAACAAACTTAGATATGTGCCAAGTCTAGAAACAAGAGACTGG-----GGGGATAACGACCTTTCGAAATAAAAT-------------------------------GTAACATTTGAAAACTGATTGGCTG-GGGGATGAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611250 262 + 1799296 AGGCTTCA--CTCAGTGCAGCTAAGAACCCAGA-TGTTATCTTGAGGGTGTTAACTAATAAGCAGTTTAAATC---AGAATGTCAGATTCTGATTTGTTTTTCGTACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCAGTAGATAGAGGTAACAAACTTAGATATGTGCCAAGTCTAGAAACAAGAGACTGG-----GGGGATAACGACCTTTCGAAATAAAAT-------------------------------GTAATATTTGAAAGCTGATTGGCTG-GGGGATGAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5169440 262 - 6934359 AGGCTTGA--CTCAGTGCAGCTAAGAACCCAGA-AGTTATCTTGAGGGTGTTAACTAATAAGCAGTTTAAATC---AAGATGTCAGATTCTGATTTGTTTCTCCTACGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--CTGTTTGAAGAGAGGAAAGTCGGTAGATAGAGGTAACAAACTTAGATATGTGCCAAGTCTAGAAACAAGAGACTAG-----GGGGATAACGACCTTTCGAAATAAAAT-------------------------------GTAATATTTGAAAACTGATTGGCTG-GGGGATGAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041221 240 + 128169293 AGGCTTGA--CTCAGTGCAGCTAAGAAACCAGA-TGTTATTGTGAGGGTGTTAACTAATAA-CAGTTTAAATC---AGAATGTGCCATT-----------TCTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--ATGTTTGAAGAGACGGAAGTCAGTAGATAGAATTAAC-AACGTCAGTCTGTAGAAAGTCTAGAAGCAAGAGACTAA-----GGGGATAATAACCTTTCAAAATAAAAT-------------------------------GCAAGATTTGAAAACTGATTGGCTG---------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17626893 238 + 18371965 AGCCTTAA----CAGTGCAGCTAAGAAACCAGA-TGTTATCGTGAGGCTGTTAACTAATAA-CAGTTTAAATC---AGAACGTGCTGTT-----------TTTGTATGTTCGC--------------------------------ATTTG-------GCAG--GCATAAATA--ATGTTTGAAGAGATGAAAGTCAGTAGATAGAATTAAC-AACTTCAGTCTGTATAAAGTCTAGACGCAAGAGACTAA-----GAGGATAATAACCTTTCACAATAAGAT-------------------------------GCAAGATTTGAAAACGGATTGGCTG---------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161668 237 - 3566421 AGGCTTGA--CTCAGTGCAGCTAAGACACCAGA-TGTTATCCTGAGGGTGTTCACTAATAA-CAGTTTCAATC---ACAATGTGCCATT-----------TTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--ATGTTTGAAGAGAGGAAACTCAGTAGATAGAATT----AACTTCAGTCTGTATAAAGTCTAGAAGCAAGAGACTAA-----GGGGAGAATAACCTTTCAAAATAAAAT-------------------------------GCAAGATTTGAAAACTGATTGGCTG---------- i cebCap1.NW_016107540v1 N 0 C 0 s aotNan1.NW_018514471v1 7360488 240 + 9267652 AGGCTTGA--CTCAGTGCAGCTAAGAAGCCAGA-TGTTACCGTGAGGGTGTTAACTAGTAA-CAGTTTAAATC---AGAATGTGCCATT-----------TTTGTATGTTCAC--------------------------------ATTTG-------GCAG--GCATAGATA--ATGTTTGAAGAGAGGAAAGTCAGTAGATAGAATTAAC-AACTTTAGTCTGTATAAAGTCTAGAAGCAAGAGACTAA-----GGGCATAATAACCTTTCAAAATAAAAT-------------------------------GCAAGATTTGAAAACTGATTGGCTG---------- i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4067662 343 + 55844845 AAGCTTGAAGTATATGGCAGCTGAGAGCACAGATTTTTATCTTGAAGCCCTTGGCTAT----GAGTTTATATCGGGAGAATGACATATTCATATTTGTTTTGTATACTCTTACTTAAGAGTAAGAgttaatttgttaatttgttaatttgttaatttgCAGATGTGTGGATAATATGTTTGAAGAGAGGAAGATCGGAAAGCAGGGGTAAT-ATTGTGGATACATGGAAAATCTGGAAACCAGAATCCAGCTGTCAGAAAAATAGGTACTTAGAGGTAAAATTaaaaaacaaaaaaaagaaacaaacaaaaaaaaaaGATTTGAAAATTAATTAGTTGAAGGGATGAG i canFam3.chr18 C 0 C 0 a score=9692.000000 s hg38.chr14_KI270725v1_random 94704 6 + 172810 -GATAAG s panTro5.chrY 330735 6 + 26350515 -AAAAAG i panTro5.chrY C 0 C 0 s panPan2.chr7 74641425 6 + 162613886 -GAAAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 4044 6 - 150013 -GAAAAG i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5666160 6 + 72422247 -GAAAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44105161 6 - 99891981 -GAAAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52336107 6 + 185818997 -GAAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124981801 6 - 192294377 -GAAAAG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7562536 6 - 10077455 -GAAAAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121502722 6 - 127223203 -GAAAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611512 6 + 1799296 -GAAAAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5169702 6 - 6934359 -GAAAAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041461 1 + 128169293 ------G i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17627131 1 + 18371965 ------G i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161905 1 - 3566421 ------G i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7360728 1 + 9267652 ------G i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4068005 6 + 55844845 GGAAAA- i canFam3.chr18 C 0 C 0 e macNem1.NW_012011522v1 329018 202 - 3123512 I a score=341080.000000 s hg38.chr14_KI270725v1_random 94710 32 + 172810 GCAGGTCTTTAGGGTCAATCCCTGT-------------------------------------------------TTTGCTT s panTro5.chrY 330741 32 + 26350515 GCAGGTCTTTAAGGTCAATCCCTGT-------------------------------------------------TTTGCTT i panTro5.chrY C 0 C 0 s panPan2.chr7 74641431 32 + 162613886 GCAGGTCTTTAAGGTCAATCCCTGT-------------------------------------------------TTTGCTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 4050 32 - 150013 GCAGGTCTTTAAGGTCAATCCCTGT-------------------------------------------------TTTGCTT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5666166 32 + 72422247 GCAGGTCTTTAAGGTCAATCCCTGT-------------------------------------------------TTTGCTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44105167 32 - 99891981 GCAGATCTTTAAGGTCAATCACTGT-------------------------------------------------TTTGCTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52336113 32 + 185818997 GCAGGTCTCTAAGGTCAATACCTGT-------------------------------------------------TTTGCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124981807 32 - 192294377 GCAGGTCTCTAAGGTCAATACCTGT-------------------------------------------------TTTGCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 329220 32 - 3123512 GCAGGTCTTTAGGGTCAATCCCTGG-------------------------------------------------TTTGCTT i macNem1.NW_012011522v1 I 202 I 226 s cerAty1.NW_012000909v1 7562542 32 - 10077455 GCAGGTCTCTAAGGTCAATACCTGT-------------------------------------------------TTTGCTT i cerAty1.NW_012000909v1 C 0 I 49 s chlSab2.chr21 121502728 81 - 127223203 GGAGGTCTCTAAGGTCAATACCTGTTTTGCTTTAGGTTGTTAGGGAAAGGCATGTCTTTAGGGTCAATCCCTGGTTTGCTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611518 32 + 1799296 GCAGGTCTCTAAGGCCAATACCTGT-------------------------------------------------TTTGCTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5169708 32 - 6934359 GCAGGTCTTTAAGGTCAATCCCTGT-------------------------------------------------TTTGCTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041462 32 + 128169293 GCAGGTCTTTAAGGTTAATCCCTGT-------------------------------------------------TTTACTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17627132 32 + 18371965 GCAGGTCTTTAAGGTTAATCCCTGT-------------------------------------------------TTTACTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161906 32 - 3566421 GCAGGTCTTTAAGGTTAATCCCTGT-------------------------------------------------TTGACTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7360729 32 + 9267652 GCAGGTCTTTAAGGTTAATCCCTGT-------------------------------------------------TTTACTT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4068011 32 + 55844845 ACAGAACTTTAAGATCAATTCTTGT------------------------------------------------GTTCACT- i canFam3.chr18 C 0 C 0 a score=93712.000000 s hg38.chr14_KI270725v1_random 94742 10 + 172810 TAAGTTGTTA s panTro5.chrY 330773 10 + 26350515 TAAATTGTTA i panTro5.chrY C 0 C 0 s panPan2.chr7 74641463 10 + 162613886 TAAGTTGTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 4082 10 - 150013 TAAGTTGTTA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5666198 10 + 72422247 TAAATTGTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44105199 10 - 99891981 TAGGTTGTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52336145 10 + 185818997 TAGATTGTTA i rheMac8.chr3 C 0 I 340 s macFas5.chr3 124981839 10 - 192294377 TAGATTGTTA i macFas5.chr3 C 0 I 338 s cerAty1.NW_012000909v1 7562623 10 - 10077455 TAGGTTGTTA i cerAty1.NW_012000909v1 I 49 I 48 s chlSab2.chr21 121502809 10 - 127223203 TAGGTTGTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611550 10 + 1799296 TAGATTGTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5169740 10 - 6934359 TAGGTTGTTA i colAng1.NW_012115910v1 C 0 I 48 s calJac3.chr8 20041494 10 + 128169293 TAGGTTGTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17627164 10 + 18371965 TAGGTTGTTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161938 10 - 3566421 TAGGTTTTTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7360761 10 + 9267652 TAGGTTGTTA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4068043 2 + 55844845 --------TA i canFam3.chr18 C 0 C 0 e macNem1.NW_012011522v1 329252 226 - 3123512 I a score=13600.000000 s hg38.chr14_KI270725v1_random 94752 1 + 172810 G s panTro5.chrY 330783 1 + 26350515 G i panTro5.chrY C 0 C 0 s panPan2.chr7 74641473 1 + 162613886 G i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 4092 1 - 150013 G i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5666208 1 + 72422247 G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44105209 1 - 99891981 G i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52336495 1 + 185818997 G i rheMac8.chr3 I 340 C 0 s macFas5.chr3 124982187 1 - 192294377 G i macFas5.chr3 I 338 C 0 s cerAty1.NW_012000909v1 7562681 1 - 10077455 G i cerAty1.NW_012000909v1 I 48 C 0 s chlSab2.chr21 121502819 1 - 127223203 G i chlSab2.chr21 C 0 I 48 s manLeu1.NW_012105809v1 611560 1 + 1799296 G i manLeu1.NW_012105809v1 C 0 I 394 s colAng1.NW_012115910v1 5169798 1 - 6934359 G i colAng1.NW_012115910v1 I 48 C 0 s calJac3.chr8 20041504 1 + 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17627174 1 + 18371965 G i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161948 1 - 3566421 G i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7360771 1 + 9267652 G i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4068045 1 + 55844845 G i canFam3.chr18 C 0 C 0 e macNem1.NW_012011522v1 329252 226 - 3123512 I a score=130701.000000 s hg38.chr14_KI270725v1_random 94753 19 + 172810 AGGGTGGTTTTACAACATA s panTro5.chrY 330784 19 + 26350515 GGGGTGGTTTTATCACATA i panTro5.chrY C 0 C 0 s panPan2.chr7 74641474 19 + 162613886 GGGGTGGTTTTATCACATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 4093 19 - 150013 GGGGTGGTTTTATCACATG i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5666209 19 + 72422247 GGGGTGGTTTTATCACGTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44105210 17 - 99891981 GGGGTGGTTTCATAACA-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52336496 19 + 185818997 GGGGAGGCTTTATTCCGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124982188 19 - 192294377 GGGGAGGCTTTATTCCGTG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7562682 19 - 10077455 GGGGAGGCTTTATTCCGTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121502868 19 - 127223203 GGGGAGGCTTTATTCCGTG i chlSab2.chr21 I 48 C 0 s colAng1.NW_012115910v1 5169799 19 - 6934359 GGGGAGGCTTTATTCCGTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041505 19 + 128169293 GGGGTGATTTTATCATATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17627175 19 + 18371965 GGGGTGATTTTATCACATC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161949 19 - 3566421 GGGGTGATTTTATCACATG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7360772 19 + 9267652 GGGGTGATTTTATCACGTG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4068046 19 + 55844845 AAGGTGGTTTTACCACATG i canFam3.chr18 C 0 C 0 e manLeu1.NW_012105809v1 611561 394 + 1799296 I e macNem1.NW_012011522v1 329252 226 - 3123512 I a score=10372994.000000 s hg38.chr14_KI270725v1_random 94772 930 + 172810 TTGTAGAATACATCATTTCAGTTTTGAGCATCTTGAGTTAAATTGTCCTAACATA---TCTCATGAATTTGATTTTCTTCCCTGGGAAGCTAATATTTCAAAAACTTAAAGAGTATATAGATTTCCAACTGGTATCCAATTTATAAAACTATCTCTAGGCTGCTGATTTCAGGAGGAGGCTCATGAATATTCTATTTGCAGAGAATATATCGGGAGTTAACATCAGCGTCAATATTTGTG-GACGACCAGTTAACTAAACCACCTCTTAGT-GTATTTAGATG-----------------GGAAATCTTAGCTGAAGATATTCAATAATGAACCAA-CAGTGACT-AAAAAATTCAATA-TTGAAGTATATTTCATTGTAATTAATTTGAATTGAAGTAGCCATATACAGCTAGTATTTACTACATTGAACAATGCAAA-TAAGAGGAAAAAAG----AACCATCTCTA-------ATACCACATGCCAAAATCCTCATCAATTTATTGTAGCTAAAGGAGTTG-ATcagaagcagcatttgaaagcatc-aactaaaccagctggggttagttcactgtcattctctcagaaccatctcttctctgaacaaaacaagtacaagagttcattgtgaatct--------gtattctccttgcctattttaaggttttgatgttgacactaatttgtgaaatccctcctgtggtgtgatatttcgt--ttTCCTTGCT--TTCTGTTAGGACAAGAATGCTTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTAGGTTGAGTGAACTTAGAATGCATTCTCTGACATATCC--AAGTTTTTCTTAATGTGAATTTGGGG----AAAAAAGCATAGTTAATTAGCTGAGACTTCTTATTCTAGGCTTGACCCTGTGTTCGACATCTATTGAATTTGTAGTTGCATGGGCTGCTCTCTGACACTGGTTACTGACCTGGAAGCTATATT s panTro5.chrY 330803 931 + 26350515 TTGTTGAATATGTCATTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCTTATGAATTTGATTTTCTTCCCTGGGAAGCTAATATTTCAAAAACTTAAGGAGGATA--GATTTCCAACTGATATCCAATTTATAAAGCTATCTCTAGGCTGCTGATTTCAGAAGGAAGCTCATGAATATTCTCTTTGCAGAGAATATATCAGGAGTTAACAACAGCTTCAATATTTGTG-GACGATCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GGAAATCTTAGCTGAAGATATTCAATAATGAACCAA-CAGTGACT-AAAAAATTCAATA-TTGAAGTATATTTCATTGTAATTATTTTGAATTGAAGAAGCCATATACAGCTAGTATTTACTACATTGAACAATGCAAA-TAAGAGGAAAAAATGAATAACCATCTCTA-------ATACCACATGCCAAAATTCTCatcaatttattctagctaaaggaattg-atcagaagcagcagtggaaagcacc-aactaaaccagctggggttagttcactgtcattctctcagaaccatctcttcgctgaacaaaacaagaacaagagttcattgtgaatct--------gcattctccttgcctattttaaggttttgatgttgacaataatttgtgaaatccctcctgtggtgtgatatttcat--tttccttgct--ttctgttaggACAAGAATGCTTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTAGGTTGAGTGAACTTAGAATGCATTCTCTGACATATCC--AAGTTTTTGTTAATATGAATTTGGG-----AAAAAAGCATTCTTAATTAGCTAAGACTTCTTATTCTAGACTTGACCCTATGATTGACATCTTTTGAATTTCTAGTTGCATGGGCTGCTCTCTGACACTGGTTAGTGACCTGGAAGCTATATT i panTro5.chrY C 0 C 0 s panPan2.chr7 74641493 932 + 162613886 TTGTAGAATATGTCATTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCTTATGAATTTGATTTTGTTCCCTGGGAAGCTAATATTTCAAAAACTGAAAGAGTATA--GATTTTCAACTTGTGTCCAATTTATAAAATTATCTCTAGGCTGCTGGTTTCAGGAGGAGGCTCATGAATATTCTATTTGCAGAGAATATATCAGGAGTTAACAACAGCATCAATATTTGTG-GACGACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GGAAATCTTAGCTGAAGATATTCAATACTGAACCAG-CAGCGACT-AAAAAATTCAATA-TTTAAGTATATTTCATTGTAATTAATTTGAAATTAAGTAGCCATATACAGCTAGTATTTACTACATTGAGCAATGCAAA-TAAGAGGACAAAATTAATAACCATCTCTA-------ATACCACATGCCAAAATCCTCATCAATTTATTCTAGCTAAAGGAGTTT-ATcagaagcagcaattgaaagcacc-aactaaaccagttggggttaattcactgtcattatctcagaaccatctcttctctgaacaaaacaagtagaagagttaatcgtgaatct--------ccgttttccttgcctaatttaaggttttgatgttgacgctaatttgtgaaatccctcctgtggtgtgatatttcgt--tttCCTTGCT--TTTTGTTAGGACAAGAATGATTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTAGGTTGAGTGAACTTAGAATGCATTCTCTGACATATCC--AAGTTTTTGTTAATATGAATTTGGGG----GTAAAAGCATACTAAATTAGCTAAGACTCCTTATTCTAGGCTTGACCCTGTGTTCGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTGGAAGCTATAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 4112 932 - 150013 TTGTAGAATATGTCATTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACGTA---TCTTATGAATTTGATTTTCTTCCCTGGGAAGCTAATGTTTCAAAAACTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCTGTAGGCTGCTGGTTTCAGGTGGAGGCTCATGAATATTCTCTTTGCAGAGGATGTATCAGGAGTTAACAACAGCTTCAATATTTGTG-GACGACCAGTTAACTAAGCCACCTCTTAGC-GTATTTAGATG-----------------GGAAATCTTAGCTGAAGATATTCAATAATCAACCAA-GAGTGACT-AAAAAATTCAATA-TTTAAGTATATTTCATTGTAATTAATTTGAATTGAAGTAGCCATATACAGCTAGTATTTACTACATTGAACAATGCAAA-TACGAGGGAAAAATTAATAACCATCTCTA-------ATACCACATGCCAAAATCTTCATAAATTTATTCTGGCTAAAGGAGTTT-ATcagaagcagcaattgaaagcaca-aactaaaccagctggggttaattcactgtcattctctcagaaccatctcttctctgaacaaaacaagtagaagagttcattgtgaatct--------gcattttccttgcctattttaaggttttgatgttgacactaatttgtgaaatccctcctgtggtgtgatatttcgt--ttTCCTTGCT--TTCTGTTAGGACAAGAATGCTTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTAGGTTGAGTGAACTTAGAATGCATTCTCTGACATATCC--AAGTTTTTGTTAATATGAATTTGGGG----GGAAAAGCATACTTAATTAGCTAAGACTTCTTATTCTAGGCTTGACCCTGTGTTTGACATCTTTTGAATCTGTAGTTGCATAGGCTGCTCTCTGACACCGGTTAGTGGCCTGGAAGCTATATT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5666228 931 + 72422247 TTGTAGAATATGTCATTTCAGTTTTAAACATCTTGAGTTAAATTGCCCTGACATG---TCTTACGAATTTGATTTTCTTCCCTGGGAAGCTGATATTTCAAAAACTTGAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCTCTAGGCTGCTGGTTTCAGGAGGAGGTTCATGAATATTCTATTTGCAGAGAATATATCGGGAGTTAACAACAGCGTCAATATTTGTG-GACGACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GGAAATCTTAGCTGAAGATATTCAATAATGAACCAA-CAGTGACT-AAAAAATTCAATATTTTAAGTATATTTCATTGTAATTAATTTGAATTGAAGTAGCTATATACAGCTAGTATTTACTACATTGAACAATGCAAA-TAAGAGGAAAAAATTAATAACCATGTCTA-------ATACCACATGCCAAAATCCTCATAAATTTATTCTAGCTGAAGGAGTTT-ATcagaagcagcaattgaaagcacc-atctaaaccagctggggttaattcactgtcattctctcagaaccatctcttctctgaacaaaacaagtagaagagttaattgtgaatct--------gcattttccttgcctgttttaaggtttcgatgttgacgcttatttgtgaaatccctcctgtggtgtgatatttcgt--tttccttgct--ttttgttaggACAAGAATGCTTCAGCTCTTAATTTAAAAT--TGTTTCTCCCTCCTAGGTTGAGTGAACTTAGAATGCATTCTCTGACATATCC--AAGTTTTTGTTAATATGAATCTGGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTTATTCTAGGCTTGACCCTGTGTTCGACATCTTTTGAATCTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTGGAAGCTATATT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44105227 937 - 99891981 -TGTAGAATATGTCATTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATATCTTCTTATGAATTTGATTTTCTTCCCTGGGGAGCTAATATTTCAAAAACTTAAAGAGTATA--GATATCCAACTTGTATTCAATTTATAAAATTATCCCTAGGCTGCTGATTTCAGGAGGAAGCTCATGAATATTCTATTTGCAGACAATATATCTGGAATTAACAACAGCTTCAATATTTGTG-GACAACCAGTTAACTAAGCCACCTCTTAGT-ATATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTAAATAATGAACCAA-CAGTGACT-AAAAAATTGAATA-TTTAAGTATATTTCATTGTAATTAATTTGAATTTAAGTAGCCATATACAGCTAGTATTTACCACATTGAACAATGCAAA-TTAGAGGAAAAAATTAATAACCATATCTA-------ATACCACATGCCAAAATCCTCATAAATTTATTCTAGCTAAAGGAGTTC-ATcagaagcagcaattgaaagcacc-aactaatccacctgacgttaattcactgtcattctctcagaaccatctcttctctgaacaaaacaagtagaagagttaattgtgaatct--------gcattttccctgcctattttaaggttttgatgttgacactaatttgttaaatccctcctgtgatgtgatatttcat--tttacttgcta-ttttgttaggaagagAATGCTTCAGCTCTTAATTTAAAAGTATGTATCTCCCTCCTAGGTTGAGTGAACTTAGAATGCATTCTCTGACATATCCATATGTTTTTGTTAATACGAATTTGGGG----AAAAAAGCATACTTAATTAACTAAGACTTCTCATTCTTGGCTTGACCCTGTGTTCAACAGTTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTGGAAGCTATATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52336515 935 + 185818997 TTGTAGAATATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCCTATGAATTTGATTTTCTTCCCCGGGAAGCTAATATTTCAAACAGTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTCATAAATATTCTATTTGCAGACAATATATCAGGAGCTAACAACAGCTTCAATATTTGTGAGACAACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTGCATAATGAACCAA-CAGTGACT-AAAAAATGGAATA-TTTAAGCGTA-TTCATCATAATTAATTTGAATTTAAGAAGCCATATACGGCTCATATTTACCACATTGAACGATGCAAA-TTAGAGGAAAATATTAATAACCATATCTA-------ATACCACAGGCCAAAATCCTCATAAATTTATTCTAGCTGAAGGAGTTC-TTCAGAAGTAGCAACTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTTTCAGAACCATTTCTTTTCTGAACAAAACAAGTAGAAGAGTTAATTGTGAATCT--------GCATTTTCCTTGCCTATTTTAAGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTAGGAAGAGAGTGTGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTCTGACTTATCCACATGTTTTTGTTAATATGAATTTAGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTTGAAGCTATATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124982207 935 - 192294377 TTGTAGAGTATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCCTATGAATTTGATTTTCTTCCCCGGGAAGCTAATATTTCAAACAGTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTCATAAATATTCTATTTGCAGACAATATATCAGGAGCTAACAACAGCTTCAATATTTGTGAGACAACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTGCATAATGAACCAA-CAgtgact-aaaaaatggaata-tttaagcgta-ttcatcataattaatttgaatttaagaagccatatacggctcatatttaccacattgaacgatgcaAA-TTAGAGGAAAATATTAATAACCATATCTA-------ATACCACAGGCCAAAATCCTCATAAATTTATTCTAGCTGAAGGAGTTC-TTCAGAAGTAGCAACTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTCTCAGAACCATTTCTTTTCTGAACAAAACAAGTAGAAGAGTTAATTGTGAATCT--------GCATTTTCCTTGCCTATTTTAAGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTAGGAAGAGAGTGTGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTCTGACTTATCCACATGTTTTTGTTAATATGAATTTAGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTTGAAGCTATATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 329478 936 - 3123512 TTGTAGAATATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCCTATGAATTTGATTTTCTTCCCCAGGAAGCTAATATTTCAAACAGTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTCATAAATATTCTATTTGCAGACAATATATCAGGAGCTAACAACAGCTTCAATATTTGTGAGACAACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTGCATAATGAACCAA-CAGTGACT-AAAAAATGGAATA-TTTAAGCGTATTTCATCATAATTAATTTGAATTTAAGAAGCCATATACAGCTCATATTTACCACATTGAACAATGCAAA-TTAGAGGAAAACATTAATAACCATATCTA-------ATACCACAGGCCAAAATCCTCATAAATTTATTCTAGCTGAAGGAGTTC-TTCAGAAGTAGCAACTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTCTCAGAACCATTTCTTTTCTGAACAAAACAAGTAGAAGAGTTAATTGTGAATCT--------GCATTTTCCTTGCCTATTTTAAGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTAGGAAGAGAGTGTGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTCTGACTTATCCACATGTTTTTGTTAATATGAATTTAGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTTGAAGCTATATT i macNem1.NW_012011522v1 I 226 C 0 s cerAty1.NW_012000909v1 7562701 937 - 10077455 TTGTAGAATATGTCGTTTCAGTTTTGAACATCCTGAGTTAAATTGTCCTAACATA---TCCTATGAATTTGATTTTCTTCCCTGGGAAGCTAATATTTCAAACAGTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTCATAAATATTCTATTTGCAGACAATATATCAGGAGCTAACAACAGCTTCAGTATTTGTGAGACAACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTGCATAATGAACCAA-CAGTGACTAAAAAAATGGAATA-TTTAAGCATATTTCATCATAATTAATTTGAATTTAAGAAGCCATATACGGCTCATATTTACCACATTGAACAATATAAA-TTAGAGGAAAACATTAATAACCCTACCTA-------ATACCACAGGCCAAAATCCTCATAAATTTATTCTAGCTGAAGGAGTTC-TTCAGAAGTAGCAATTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTCTCAGAACCATTTCTTTTCTGAACAAAACAAGTAGAAGAGTTAATTGTGAATCT--------GCATTTTCCTTGCCTATTTTAAGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTAGGAAGAGAGTATGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTCTGACTTATCCACATGTTTTTGTTAATATGAATTTAGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTGGAAGCTATATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121502887 916 - 127223203 TTGTAGAATATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCTTATGAATTTGATTTTCTTCCCCGGGAAGTTAATATTTCAAACAGTTAAAGACTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTTATAAATATTCTATTTGCAGACAATATATCAGGAGCTAACAACAGCTTCAATATTTGTGAGACAA-CAGTTAACTAAGCCACCTCTTAG-------------------------------------TTAGCTAAAGATATTGCATAATGAACCAA-CAgtgact-aaaaaatggaata-tttaagcgtatttcatcataattaatttgaatttaagtagccatatagagctcatatttaccacattgaacaatgcaAA-TTAGAGGAAAACATTAATAACCATATCTA-------ATACCACAGGCCAAAATCCTCATAAATTTATTCTAGCTAAAGGAGTTC-TTCAGAAGTAGCAATTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTCTCAGAACCATTTCTTCTCTGAACAAAACAAGTAGAAGAGTTAATTGTGAATCT--------GCATTTTCCTTGTCTATTTTAAGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTAGGAAAAGAATGCGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTCTGACTTATCCACATGTTTTTGTTAATATGAATTTAGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTGGAAGCTATATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 611955 936 + 1799296 TTGTAGAATATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCCTATGAATTTGATTTTCTTCCCCGGGAAGCTAATATTTCAAACAGTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTCATAAATATTCTATTTGCAGACAATATATCAGGAGCTAACAACAGCTTCAGTATTTGTGAGACAACCAGTTAACTAAGCCACCTCTTAGT-ATATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTGCATAATGAACCAA-CAGTGACT-AAAAAATGGAATA-TTTAAGCATATTTCATCATAATTAATTTGAATTTAAGAAGCCATATACGGCTCATATTTACCACATTGAACAATGTAAA-TTAGAGGAAAACATTAATAACCCTACCTA-------ATACCACAGGCCAAAATCCTCATAAATTTATTGTAGCTGAAGGAGTTC-TTCAGATGTAGCAACTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTCTCAGAACCATTTCTTTTCTGAACAAAACAAGTAGAAGAGTTAATTGAGAATCT--------GCATTTTCCTTGCCTATTTTATGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTAGGAAGAGAGTACGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTATGACTTATCCACATGTTTTTGTTAATATGAATTTAGGG----GAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCTGGAAGCTATATT i manLeu1.NW_012105809v1 I 394 C 0 s colAng1.NW_012115910v1 5169818 934 - 6934359 TTGTAGAATATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAACATA---TCTTATGAATTTGATTTTCTTCCCTGGGAAGCTAATATTTCAAACAGTTAAAGAGTATA--GATTTCCAACTTGTATCCAATTTATAAAATTATCCCCAGACTGCTGATTTTAGGAAGAGGCTCATGAATATTCTATTTGCAGACAATATATCAGAAGCTAACAACAGCTTCAATATTTGTGAGACAACCAGTTAACTAAGCCACCTCTTAGT-GTATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTACATAATGAACCAA-CAGTGACT-AAAAAAT-GAATA-TTTAAGTGTA-TTCATCATAATTAATTTGAATTTAAGTAGCCATATACAGCTCATATTTACCACATTGAACAATGCAAA-TTAGAGGAAAACATTAATAACCATATCTA-------ATACCACAGGCCAAAATCCTCATACATTTATTCTAGCTAAAGGAGTTC-TTCAGAAGTAGCAATTGAAAGCACC-AACTAAACCAGCTTGTATTAATTCACTATCATTCTCTCAGAACCATTTCTTCTCTGAACAAAACAAGTAGAAGAGTTAACTGTGAATCT--------GCATTTTCCTTGCCTATTTTAAGGTTTTGATGTTGACACTAATTGGTGAAATCCCTCCTGTGGTGTGATATTTCAT--TTTACTTGCTA-TTTTGTTCGGAAGAGAGTGTGTCAGCTCTTAATTTAAAATTATGTTTCTCCCTCCTATGTTGAGTGAACTTAGAATGCATTCTCTGACATATCTACATGTTTTTGTTAATATGAATTCAGGG----AAAAAAGCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGACATCTTTTGAATTTGTAGTTGCATAGGCTGCTCTCTGACACTGGTTAGTGATCCGGAAGCTATATT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20041524 940 + 128169293 TCGTAGAATATGTCATTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAAGGTA---TCTAATAAACATGATTTTCTTCCTTGGGAAGCTAATATTTCAAAAAGTTAAAGAGTGTA--GATTTCCAGCATGTATCCCACTTATAAAATTGTCCCTAGGCTGTTTATTTTAGGAAGAGGTTTATGAATATTCTATATGCAGACAATATATAAGGAGTTAACAACAGCTTCAGTACTTGTGGGACAACCAGTTAACTAAGCCACCTCTTAGTGGCATTTAGAAG-----------------GAAAATCTTAGCTGAATATATTATATAATAAACCAGTCAgtgatg-aaaaaattgaata-ttgaagtatactttattgtaattaatttgaattaaagtagccatatatggctagtatataacatattgaacaatgcaAA-TTAGAGGAAAA-ATTAATAACCAGTTCTA-------ATACCACATGCCAAAATCCTCATCCATTTATTCCAGCTAAAGGGGCTC-ATCACTAGTAGCAACTGAAAGCACC-ATCTAAACCAGTTTGTGCTAATTCA--GTCATTTTCTCACAGCCATCTCTTCTCTGAACATAACAAGTAGAAGAGTCAATTCTGAATCT--------GCACTTTCCTTGACTATTTTAAGGTTTTTGCGTTCACACTAATTTGTGAAATCCCTCCTGTGGTGCGATACTTCAT--TTTACTGGCTATTTTTGTTAGGGAGAAAGTGTTTCAGCCCTTTATTTAAAATTATGTTTCTCCCTCCTAAGTTGAGTGAACTTAGAATGCATTCCCTGATATACCCACATGTTTTTGTTAATATGAATTTGAGGGAAAAAAAAAACATACTTAATTAGCGAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGGCCTCTTTTGAGTTTGTAGCTGCATAGGCTGCTCTCTGACAGTAGTTAGTGATCTGGAAGCTTTATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17627194 936 + 18371965 TTGTAGAATACGTCATTTCAGTTTTGAACATCTTGAGTTAAATCGTCCTAAGGTA---TCTAATGAATATGATTTTCTTCCCTGGGAAGCTAATATTTCAAAAAGTTAAAGAGTATA--GATTTCCAGCATGTATCCCATTTATAAAATTATCCCTAGGCTGTTTATTTTAGGAAGAGGTTCATGAATATTTTATATTCAGACAACATATAAGGAGTTAACAACAGCTTCAGT-CTTGTGGGACAACCAGTTAACTAAGCAACCTCTCGGTGGTATTTAGATG-----------------GAAAATCTTAGCTGAAAATATTATATAATAAACCAGTCAgtgact--aaaaattgaata-ttaaagtatatttcattgtaattaatttgaattaaactagccatatatggctagtatttaccacattgaacaatgcaaa-ttagaGAAAAA-ATTAATAATCATTTCTA-------ATACCACATGCCAAAATCCTCATACGTTTATTCCAGCTAAAGGAGCTCAATcagtagcagcaattgaaagcact-atctaaaccagcttgtgttaattcactgtcattctctcagagccatctcttctctgaactaaacaagcagaagagtcgattctgaatc----------cactttccttgcctattttccggcttttatgttgacactaatttgtgaaatccctcctgtggtgtgatacttcat--tttacttgcta-ttttgttaggaagaAAGTGCTTCAGCCCCTTATTTAAAATTATCTTTCTCCCTCCTGAGTCGAGTGAACTTAGAATTCATTCCCTGATATGCCCACATGTTTTTGTTAATATGAATTTAAGG--AAAAAAAATCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGCATTTGGCCTCTTTTGAATTTGTAGTTGTATAGGCCGCTCTCTGACAGTAGTTAGTGATCTCGAAGCTTTATT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2161968 935 - 3566421 TTGTAGAATATGTCGTTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAAGGTA---TCTAATGAATATGATTTTCTTCCCTGGGAAGCTAGTATTTCAAAAAGTTAAAGAGTATA--GATTTCCAGCATGTATCCCATTTATAAAATTATCTCTAGGTTGTTTATTTTAGGAAGAGGTTCATGAATATTCTATATGCAGACAACATATAAGGAGTTAGCAACAGCTGCAGTACTTGTGGGAAAACCAGTTAACTAAGCCGCCTCTTAGTGGTATTTAGATG-----------------GAAAATCTTAGCTGAAGATATTATATAATAAACCAGTCAgtgact-agaaaattgaata-tttaagtatattttattgaaattaatttgaattaaagtggccatatatggctagtatttaccacattgaacaatgcaAA-TTAGAGGAAAA-ATTAGTAACCATTTCTA-------ATACCACATGCCAAAATCCTCATACATTTATTCCAGCTAAAGGAGCTC-ATcagtagtagcaactgaaagcacc-atctaaaccagcttgtgttaatttactgtcattctttcagagtcatctcttctctggacaaaacaagtagaagagttaattctgaatct--------gcactttccttgcctattttaaggtttttatgttgacactaatttgtgaactccctcctgtgatgtgatacttcat--tttacttgcta-ttttgttaggaagaAAGTGCTTTAGCCCTTTATTTAAAATTATGTTTCTCCCTCCCGAGTTGAGTGAACTTAGAATGCATTCCCTGATATACCCAC--GTTTTTGTTAATATGAATTTGAGG----AAAAAATCATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGGCTTCTTTTGAATTTGTAGTTGCATAGGCCGCTCTCTGACAGTAGTTAGTGATCTGGAAGCTTTATT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7360791 934 + 9267652 TTGTAGAATATGTCATTTCAGTTTTGAACATCTTGAGTTAAATTGTCCTAAGGTA---TCTAATGAATATGATTTTCTTCCCTGAGAAGCTAATATTTCAAAAAATT--AGAGTATA--GATTTCCAGCATGTATCCCATTTATAAAATTATCCCTAGGCTGTTTATTTTAGGAAGAGGTTCATGAATATTCTATATGCAGACAACATGTAAGGAGTTAACAACAGCTTCCGTACTTGTGGGACAACGAGTTAACTAAGCCACCTCTCAGTGGTATTTAAATG-----------------GAAAATCTTAGCTGAAGATATTATATAATAAACCAGTCAgtgact-aaaaaattgaatt-tttaagtatattttattgtaattaatttgaattaaagtagccatatatggctagtatttaccacattgaacaatgcaaa-ttagaGGAAAA-ATTAATAACCATTTCTA-------ATACCACATGCCAAAATCCTCATACatttattccagctaaaggagctc-atcagtagtagcaattgaaagcacc-atctaaaccagcttgtgttcattcactgtcattctctcagagccatctcttctctgaacaaaacaagtagaagagttaattctgaatct--------gcactttccttgcctattttaaggtttttgtgttgacactaatttgtaaaatccctcctgtggtgtgatacttcat--tttacttgcta-ttttgttaggaagaAAGTGCTTCAACCCTTTATTTAAAATTATGTTTCTCCCTCCTAAGTTGAGTGAACTTAGAATGCATTCCCTGATATACCCAC--GTTTTTGTTAATATGAATTTGAGG---AAAAAAATTATACTTAATTAGCTAAGACTTCTCATTCTAGGCTTGACCCTGTATTTGGCCTCTTTTGAATTTGCAGTTGCATAGGCTGCTCTCTGACAGTAGTTAGTGATCTGAAAGCtttatt i aotNan1.NW_018514471v1 C 0 I 859 s canFam3.chr18 4068065 905 + 55844845 -------CTATG----TTCGGTTTTGAACATCTTGACTAGCATTGTCTTAAGATA---TTTTATGAATTTGATTTTCACTTCTGGGAACCTAATATTTCAAAAAGTTAAAGAGTATA--GATTTTCAACATG-AACCACATTATAAAATAATTCCTTATGTGTTGATTTTAGGAAGAGGCTCATAAGTATTCTGTTAGCAGACAACAT---------------------------TTGTGAGAGAGACTGTTAACTAAGGGAGCTCTGATG-ATCCTCAGAAGTGGGGGTCTCTGGTTATGCAAGCTCTGGCTGAAGATATTGTTTAATGAGCCAATCAGTGCCC-AAGAACATAAACA-TTTAACTTAATTTAAGTGTAATTA-----AATTTAAAGGGACATATTTGTCTAGCATCCACCATATTGAATAATTcaagtttagagaaaaaaatcaatgactttatcaataactgcataccacatgccaagaaccttgttaatttgttc-agcaaaaagagtac-atcaggagtagtaattggaatcaccaaactaaaccaacttatgttaattcactatcattctcccagaaccatctcttctctgggcaaaattaacacagaagttaattgagactcttctgggaatcattatcctt-catattttaagattttgatgttgacactaatttatgaaatccctcttgggatgcgatattacattattttttcccta-ttttgttatgaagaAAACACTTCAGTCCTTGATTTAAAATTGTGTTTCT--CTGCTAGGTTGAGC-ACCGTAGAATCTATTCTCTGACACATCT----------GTGGATGTAACTT---GG----AAAAAAGT---CGGTATTAG-TAAGATTTCTTTTTCCAGGC-TGATTCTATAATTGGCCTTTTTTGAATATACAGTTGTGTGTGCTATTATCTGGCACTACTTAGAAATCTGGGAGCTACTT- i canFam3.chr18 C 0 C 0 a score=332119.000000 s hg38.chr14_KI270725v1_random 95702 44 + 172810 AACGTTAG---GGGAGG-TGGTGTATGAGCAT--TAGAGGTATCCTTGCA s panTro5.chrY 331734 44 + 26350515 AATGTTAG---GGGAGG-TGGTGTATGAGCAT--TAGAGGTATCCTTGCA i panTro5.chrY C 0 C 0 s panPan2.chr7 74642425 44 + 162613886 AATGTTAG---GGGAGG-TGGTGTATGTGCAT--TAGGGGTATCCTTGCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5044 44 - 150013 AACGTTAG---GGGAGG-TGGTGTGTGAGCAT--TACAGGTATCCTTGCA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667159 44 + 72422247 AACGTTAG---GGGAGG-TGGTGTGTGAGCAT--TAGAGGTATCCTTGCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44106164 44 - 99891981 AACTTTAG---GGGAGG-TGGTGTATGAGCAT--TAGAGGTATCCTTGCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337450 44 + 185818997 TAGGTTAG---GGGAGG-TGGTGTATGAGAAT--TAGACGTATCCTTGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983142 44 - 192294377 TAGGTTAG---GGGAGG-TGGTGTATGAGAAT--TAGACGTATCCTTGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330414 44 - 3123512 TAGGTTAG---GGGAGG-TGGTGTATGAGAAT--TAGACGTATCCTTGCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7563638 44 - 10077455 TAGGTTAG---GGGAGG-TGGTGTATGAGAAT--TAGACATATCCTTGCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121503803 44 - 127223203 TAGGTTAG---GGGAGG-TGGTGTATGAGAAT--TAGACGTATCCTTGCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 612891 44 + 1799296 TAGGTTAG---GGGAGG-TGGTGTATGAGAAT--CAGACATATCCTTGCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5170752 44 - 6934359 TAGGTTAG---CGGAGG-TGGTGTATGAGAAT--TAGACGTATCCTTGCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20042464 36 + 128169293 AAGGTTAGAGTAGGAGG-TGGTACATGAGCAT--CAAAC----------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17628130 36 + 18371965 AAGGTTAGAGTAGGAGG-TGGTACATGAGCAT--CAGAC----------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2162903 36 - 3566421 AAGGTTAGAGTAGGAGG-TGGTACATGAGGAT--TAAAC----------- i cebCap1.NW_016107540v1 C 0 C 0 s canFam3.chr18 4068970 47 + 55844845 GAGGTTAA---GAGAGATTGGTGCATGAGGATAATATATGTATCTTTGTA i canFam3.chr18 C 0 I 23 e aotNan1.NW_018514471v1 7361725 859 + 9267652 I a score=473898.000000 s hg38.chr14_KI270725v1_random 95746 51 + 172810 AGGAAAGACTTGTCTTATCTCAATACGTC------TTTTTTTT-TGCACACAAGAAAG s panTro5.chrY 331778 50 + 26350515 AGAAAAGACTTGTCTTATCTCAATATGTC------TTTTTTTT--GCACACAAGAAAG i panTro5.chrY C 0 C 0 s panPan2.chr7 74642469 51 + 162613886 AGGAAAGACTTGTCTTATGTCAATAAGTC------TTTTTTTT-TGTGCACAAGAAAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5088 52 - 150013 AGGAAAGACTTGTCTTATCTCAATACGTC------TTTTTTTTTTGCACACAAGAAAG i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667203 52 + 72422247 AGGAAAGACTTGTCTTATCTCAATACGTC------TTTTTTTTTTGCACACAAGAAAG i ponAbe2.chrUn C 0 I 244 s nomLeu3.chr17 44106208 49 - 99891981 AAGAAAGACTTGTCTTATGTCAATACTTC------TTTTTT---TGCACACAAGAAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337494 50 + 185818997 AGGAAAGACTTGTCTTATCCCAATACATC-------TTTTTTT-TGCACACAACAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983186 50 - 192294377 AGGAAAGACTTGTCTTATCCCAATACATC-------TTTTTTT-TGCACACAACAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330458 50 - 3123512 AGGCAAGACTTGTCTTATCTCAATACATC-------TTCTTTT-TGCACACAACAAAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7563682 57 - 10077455 AGGAAAGACTTGTCTTATCTCAATATGTCTTTTTTTTTTTTTT-TGCACACAACAAAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121503847 51 - 127223203 AGGAAAGACTTGTCTTATCTCAATACGTC------TTTTTTTT-TGCACACAACAAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 612935 50 + 1799296 AGGAAAGACTTGTCTTATCTCAATACGTC-------TTTTTTT-TGCACACAACAAAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5170796 51 - 6934359 AGGAAAGACTTGTCTCACCTCAATACGTC------TTTTTTTT-TGCACACAACAAAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20042500 49 + 128169293 AGGGAAGACTTGTCTTATCTCAATGCATC------ATTTTT---TGCTCACAAGAAAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17628166 49 + 18371965 AGGGAAGACTTGTCTTATCTCAATGAATC------ATTTTT---TGCTCACAAGAAAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2162939 49 - 3566421 AGGGAAGACTTGTCTTATCTCAATACATC------ATTTTT---TGCTCACGAGAAAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7362584 48 + 9267652 AGGGAAGACTTGTCTTATCTCAATACATC------A-TTTT---TGCTCACAAGAAAG i aotNan1.NW_018514471v1 I 859 C 0 s canFam3.chr18 4069040 48 + 55844845 AGGAAAGATTAGCTGTATCTAAA---ATG------TTTACTTT-TGAACACAAGGAAC i canFam3.chr18 I 23 C 0 a score=2706426.000000 s hg38.chr14_KI270725v1_random 95797 239 + 172810 TCAATG------------------------------TTTGAGTCTTCTAAAATCTTCCTATTTCCAAGTTGCAGAGTACC-------ATTGATTCCTAAACAAAGACCTAA-TTTTTGAGTCAGAGACGTGGCAAGGTAGTGAATCACCATTATAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCCAATTATTAAGATATTTGGGTGTTTCGTTAAGAAT-----GGAAGATTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC s panTro5.chrY 331828 239 + 26350515 TCAATG------------------------------TTTGATTCATCTAAAATCTTCCTATTTCCAAGTTGCAGAGTACC-------ATTGATTCCTAAACAAAGATCTAA-TTTTTGACTCAGAGACGTGGCAAGGTAGTGAATCACCATTATAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATATTTATAT---TTTGCCCAATTATTAAGACATTTGGGTGTTACGTTAAGAAT-----AGAAGATTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i panTro5.chrY C 0 C 0 s panPan2.chr7 74642520 239 + 162613886 TCAATG------------------------------TTTGAGTCTTCTAAAATCGTCCTATTTCCAAGTTGCAGAGTACC-------ATCGATTCCTAAACAAAGATCTAA-TTTTTGACTCAGAGACGTGGCAAGGTAGTGAATCACCATTATAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCCAATTATGAAGATATTTGGGTGTTTCGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5140 239 - 150013 TCAGTG------------------------------TTTGAGCCTTCTAAAATCTTCCTATTTCCAAGTTGCAGAGTACC-------ATTGATTCCTAAACAAAGATCTAA-TTTTTGAGTCAGAGACGTGGCAAGGTAGTGAATCACCATTATAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATAGTTAGAT---TTTGCCCAATTATTAAGATATTTGGGTGTTTCGTTAAGAAT-----GGAAGATGCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667499 239 + 72422247 TTAATG------------------------------TTTGAGTCTTCTAAAATCTTCCTATTTCCAAGTTGCAGAGTACC-------ATTGATTCCTAAACAAAGATCTAA-TTTTTGACTCAGAGACGTGGCAAGGTAGTGAATCACCATTATAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATGTTTAGAT---TTTGCCCAATTATTAAGGTGTTTGGGTGTTTCGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i ponAbe2.chrUn I 244 C 0 s nomLeu3.chr17 44106257 239 - 99891981 TCAATG------------------------------TTTGAGCCTTCTAAAATCTTCCTATTTCCAAGTTGCAGAGTACC-------ATTGATTCCTAAACAAAGATCTAA-TTTTTGACTCAGAGACATGGCAAGGTAGTGAATCACCATTAGAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCCAATTATTAAGATGTTTGAGTGTTTTGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337544 237 + 185818997 TCAATG------------------------------TTTGAGTCTTCTAAAATCTTCCTATttccaagttgcagagtacc-------attgattcctaaacgaagatctaa-tttttgactcagagacgaggcaaggtagtgaatcaccattgtaatttaacaatcttcaagatAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCTAATTATTAAC--ATTTGGGTGTTCTGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983236 237 - 192294377 TCAATG------------------------------TTTGAGTCTTCTAAAATCTTCCTATTTCCAAGTTGCAGAGTACC-------ATTGATTCCTAAACGAAGATCTAA-TTTTTGACTCAGAGACGAGGCAAGGTAGTGAATCACCATTGTAATTTAACAATCTTCAAGATAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCTAATTATTAAC--ATTTGGGTGTTCTGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330508 237 - 3123512 TCAATG------------------------------TTTGAGTCTTCTAAAATCTTCCTATttccaagttgcagagtacc-------actgattcccaaacgaagatctaa-tttttgactcagagacgaggcaaggtagtgaatcaccattgtaatttaacaatcttcaagatAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCTAATTATTAAC--ATTTGGGTGTTCTGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7563739 237 - 10077455 TCAATG------------------------------TTTGAGTCTTCTAAAATCTTCCTATttccaagttacagggtacc-------attgattcctaaacaaagatctaa-tttttgactcagagacgtggcaaggtagtgaatcaccattgtaatttaacaatcttcaagatAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCTAATTATTAAC--ATTTGGGTGTTCTGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGTGCAGAGACTATAAAGGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121503898 227 - 127223203 TCAATG------------------------------TTTGAGT------AAATCTTCCTATTTCTAAGTTGCAGAGTACC-------ATTGATTCCTAAACAAAGATCTAA-TTTTTGACTCAGAGACGTGGCAAGGTAGTGAATCACCACTGTAATTTAACAATCTTTAAGATAAAATTATCTCTCTG----ATATTTAGAT---TTTGCCTAATTATTAACATATTTGG------TGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 612985 237 + 1799296 TCGATG------------------------------TTTgagtcttctaaaatcttcctatttccaagttgcagggtacc-------attgattcctaaacaaagatctaa-tttttgactcagagacgtggcaaggtagtgaatcaccattgtaatttaacaatcttcaagataaaaTTATCTCTCTG----ATATTTAGAT---TTTGCCTAATTATTAAC--ATTTGGGTGTTCTGTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGTGCAGAGACTATAAAGGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5170847 239 - 6934359 TCAATG------------------------------ttggagtcttctaaaatcttcctatttccaacttgcagagtgcc-------attgattcctaaacaaagatctaa-tttttgactcagagacgtggcaaggcagtgaatcaccattgtaatttaacaatcttcaagatAAAATTATCTCTCTG----ATATTTAAAT---TTTGCCTAATTATTAACATGTTTGGGTGTTCTGTTAAGAAC-----GGAGGACTCTAGTCT---------CTTGAGCAGAGACTATAAAGGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20042549 246 + 128169293 CCAATG------------------------------TTTGAATCCTCTAAACTCTTCCTATTTACAAGCTGCAGAGGATCTAAACAAACCAATTCCTAAACAAAGACCTAA-ATTTTGACTCAGAGACATGGCAAGGTAGTGAAACACCAACACAATTTAACAATATTCAAGATAAAATGATCTCTCTG----ATATTTAGTT---TTTGCCCAATTATTAAGATATTTGGGTGTTCCTTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGGGACTATGTAGGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17628215 242 + 18371965 CCAATG------------------------------TTTGAATCCTCTAAAGTCTTCCTATTTCCAAGTTGCAGAGGGTC-------ATTGATTCCTAAACGAAGACCTAA-ATTTTGACTCAGAGATATGACAAGGTAGTGAAACACCATGATCATTTAACAATATTCAAGATAAAATGATCTCTCTGATTAATATTTAGTT---TTTGCTCAATTATGAAGATATTTGGGTGTCCCTTTAAGTAT------GAAGACGCTAGTCT---------CTTGAGCAGGGACTATATTGGC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2162988 237 - 3566421 CCAAT-------------------------------TTTGAATCCTCTAAAATCTTCCTATTTCCAAGTTGCAGAGGATC-------ATTGATTCCTAAACAAAGACCTAA-ATTTTGACTCAGAGATATGGCAAGGTAGTGAAACACCATTACAATTTAACAATATTCAAGATAAAATGATCTCTCTG----ATGTTTAGTT---TTTGCCCAATTATTAAGATATTTGGGTGTTCCTTTAAGAAT------GAAGACTCTAGTCT---------CTTGAGCAGGGACTATATAGGC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7362632 239 + 9267652 CCAATG------------------------------TTGGAATCCTCTAGAATCTTTCTATTTCCAAGTTGCAGAGGATC-------ATTGATTCCTAAACAAAGACCTAA-ATTTTGACTCAGAGACATGGCAAGGTAGTGAAACACCATTATAATTTAACAATATTCAAGATAAAATTATCTCTCTG----ATATTTAGTT---TTTGCCCAATTATCAAGATATTTGGGTGTTCCTTTAAGAAT-----GGAAGACTCTAGTCT---------CTTGAGCAGGGACTATATAGGC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4069088 287 + 55844845 TCAATGGTATTTAAGGATTTGTGTATTTTGGAGCTATTTGAGTTCTCTCAAATATTTCTATTTCAAAATTTTAAAGTATT-------GTTCATTCCAAAGCAAAGACCTAATTTTTTGGCTCAAAAACACGGCTAGTTTGGCAATTACTGTTGTAATTTAGCAGTCTTCAAGATCAGTTTCTCTCTCTG----ATATTTAGTTAAATTTGCTTGACTATTGAGATGGTTGGGTGTGTCATTAAAAAAATAAAGAGAAATTCAGGTTCTTACTATGGCTTGAATAGAAAATATAAAGGC i canFam3.chr18 C 0 C 0 a score=1192352.000000 s hg38.chr14_KI270725v1_random 96036 120 + 172810 CTCAGATGATCATTTTTAATTTTATGCTCTTTTCTTTAACACCTTCAACACAGTTGGAAGCGGCTGATATTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATGCATGGTTCAGTGGTAGA s panTro5.chrY 332067 120 + 26350515 CTCAGATGATCATTTTTAATTTTATGCTCTTTTCTTTAACACCTTCAACACAGTTGGAAGCAGCTGATATTCCCCAGAGTTGTTGTGTTTTTTAATGCAAATGCATGGTTCAGTGGTAGA i panTro5.chrY C 0 C 0 s panPan2.chr7 74642759 120 + 162613886 CTCAGATGATCATTTATAATTTTATGCTCTTTTCCTCAACACCTTCAACACAGTTGGAAGCAGCCAATATTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATGCATGGTTCAGTGGTAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5379 120 - 150013 CTCAGATGATCATTTATAATTTTATGCTCTTTTCTTTAACACCTTCAACACAGTTGGAAGCAGCCGATATTCCCCAGAGTTGTTGTGTTTTTGAAACCAAATGCATGGTTCAGTGGTAGA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667738 120 + 72422247 CTCAGATGATCATTTATAATTTTATGCTCTTTTCTTTAACGTCTTTAACACAGTTGGAAGCAGCCAATGTTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATGCATGGTTCAGTGGTGGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44106496 117 - 99891981 CTCAGATGATCATTTATATTTTTATGCTCTTTTCTTTAACATCTTCAACACAGTTGGAAGCAGCCAATGTTCCCCAGA---GTTGTGTTTTTTAAACCAAATGCATGGTTCAGTGGTAGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337781 119 + 185818997 TTCAGATGGTCATTTATAATTTTATGCTCTTTTCTTAAACATCTTCAGCA-GGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATATATGGTTCAATGGTAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983473 119 - 192294377 TTCAGATGGTCATTTATAATTTTATGCTCTTTTCTTAAACATCTTCAGCA-GGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATATATGGTTCAATGGTAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330745 119 - 3123512 TTCAGATGGTCATTTATAATTTTATGCTCTTTTCTTAAACATCTTCAGCA-GGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATATATGGTTCAATGGTAGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7563976 119 - 10077455 TTCAGATGGTCATTTATAATTTTATGCTCTTTTCTTAAACATCTTCAGCA-GGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGGTTTTTAAACCAAATATATGGTTCAATGGTAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121504125 119 - 127223203 TTCAGATGGTCATTTATAATTTTATGTTCTTTTCTTAAACATCTTCAGCA-GGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATACATGGTTCAATGGTAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 613222 119 + 1799296 TTCAGATGGTCATTTATAATTTTATGCTCTTTTCTTAAACATCTTCAGCA-AGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGGTTTTTAAACCAAATATATGGTTCAATGGTAGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5171086 119 - 6934359 CTCAGATGGTCATTAATAATTTTATGCTCTTTTCTTAAACATCTTCAACA-AGTTGGAAGTAGTCAATGTTCCCCAGAGTTGTTGTGTTTTTTAAACCAAATATATGGTTCAATGGTAGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20042795 116 + 128169293 CTTAGATGGTTATTTATTCTTTTATGTTCTCTTCTATATCATCTTCAACATGGCTGGAAGCAGCCAATGTTCTCCACAGTT-TTGTGTTTTTTAAACCAAATACATGGTTCAATG---GA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17628457 119 + 18371965 CTGAGATGGTGATTTGTTCTTTTATGTTCTTTTCTTTATCATCTTCAACACGGCTGGAAGCAGCCAATGTTCCCCACAGTT-TTGTGGTTTTTAAACCAAATACATGGTTCAATGGTAGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2163225 119 - 3566421 CTGAGATGGTTATTTATTCTTTTATGTTCTTTTCTTTATCATCTTCAACATGGCTGGAAGCAGCCAATGTTCCCCACAGTT-TTGTGTTTTTTAAACCAAATACATGGTTCAATGGTAGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7362871 119 + 9267652 CTTATATGGTTATTTATTCTTTTAGGCTCTTTTCTTTAGCATCTTCAACACGGCTGGAAGCAGCCAATGTTCCCCACAGTT-TTGTGTTTTTTAAACCAAATACATGGTTCAATGGTAGA i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4069375 0 + 55844845 C a score=545784.000000 s hg38.chr14_KI270725v1_random 96156 49 + 172810 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACACTTCATTTCAGGTGA s panTro5.chrY 332187 49 + 26350515 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACACTTCATTTCAGGTGA i panTro5.chrY C 0 C 0 s panPan2.chr7 74642879 49 + 162613886 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACACTTCATTTCAGGTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5499 49 - 150013 AAACTGGGTTGATCCAAGCTGTTTTCAGTAAACACTTCATTTTAGGTGA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667858 49 + 72422247 AAACTGGGCCGATCCAAGCTGTTTTCAGGAAACACTTCATTTCAGGTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44106613 49 - 99891981 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACAGTTCATTTCAGGTGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337900 49 + 185818997 AAACTGGGCTGATCCAAGCAGTTTTCAGTAAACACTTCATTTCAGGTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983592 49 - 192294377 AAACTGGGCTGATCCAAGCAGTTTTCAGTAAACACTTCATTTCAGGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330864 49 - 3123512 AAACTGGGCTGATCCAAGCAGTTTTCAGTCAACACTTCATTTCAGGTGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7564095 49 - 10077455 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACACTTCATTTCAGGTGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121504244 49 - 127223203 AAACTGGGCTGATCCAAGCAGTTTTCAGTAAACACTTCATTTCAGGTGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 613341 49 + 1799296 AAACTGGGCTGACCCAAGCTGTTTTCAGTAAACACTTCATTTCAAGTGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5171205 49 - 6934359 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACAATTCATTTCAGGTGA i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 20042911 48 + 128169293 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAATGCTTCATTTCAGGTG- i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17628576 48 + 18371965 AAACGGGGCTGATCCAAGCTGTTTTCAGTAAACGCTTCATTTCAGATG- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2163344 48 - 3566421 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACGATTCATTTCAGATG- i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 7362990 48 + 9267652 AAACTGGGCTGATCCAAGCTGTTTTCAGTAAACTTTTCATTTCAGATG- i aotNan1.NW_018514471v1 C 0 I 1 s canFam3.chr18 4069375 24 + 55844845 AAGCTG-------------TGCTTTCAATAAGCACTT------------ i canFam3.chr18 C 0 C 0 a score=4246.000000 s hg38.chr14_KI270725v1_random 96205 1 + 172810 A s panTro5.chrY 332236 1 + 26350515 C i panTro5.chrY C 0 C 0 s panPan2.chr7 74642928 1 + 162613886 C i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5548 1 - 150013 C i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667907 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44106662 1 - 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337949 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983641 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330913 1 - 3123512 C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7564144 1 - 10077455 C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121504293 1 - 127223203 C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 613390 1 + 1799296 C i manLeu1.NW_012105809v1 C 0 C 0 e canFam3.chr18 4069399 0 + 55844845 C e saiBol1.JH378145 17628624 1 + 18371965 I e aotNan1.NW_018514471v1 7363038 1 + 9267652 I e cebCap1.NW_016107540v1 2163392 1 - 3566421 I e calJac3.chr8 20042959 1 + 128169293 I e colAng1.NW_012115910v1 5171254 1 - 6934359 I a score=270929.000000 s hg38.chr14_KI270725v1_random 96206 23 + 172810 CTATTTCATATTAAATAATCTCT s panTro5.chrY 332237 23 + 26350515 CTATTTCATATTAAATAATCTCT i panTro5.chrY C 0 C 0 s panPan2.chr7 74642929 23 + 162613886 CTATTTCATATTAAATAATCTCT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5549 23 - 150013 CTATTTCATATTAAATAATCTCT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667908 23 + 72422247 CTATTTCATATTAAATAATCTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44106663 23 - 99891981 CTATTTCATATTAAATAATCTCT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337950 23 + 185818997 CTATTCCATATTAAATAATCTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983642 23 - 192294377 CTATTCCATATTAAATAATCTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330914 23 - 3123512 CTATTCCATATTAAATAATCTCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7564145 23 - 10077455 CTATTCCATATTAAATAATCTCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121504294 23 - 127223203 CTATTCCATATTAAATAATCTCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 613391 23 + 1799296 CTATTCCATATTAAATAATCTCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5171255 23 - 6934359 CTATTCCATATTAAATAATCTCT i colAng1.NW_012115910v1 I 1 I 319 s calJac3.chr8 20042960 23 + 128169293 TTATTCCATATTAAATAATCTCT i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17628625 23 + 18371965 TTATTCCATATTAAATAATCTCT i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2163393 23 - 3566421 TTATTCCATATTAAATAATCTCT i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 7363039 23 + 9267652 TTATTCCATATTAAATAATTTTT i aotNan1.NW_018514471v1 I 1 C 0 e canFam3.chr18 4069399 0 + 55844845 C a score=12673151.000000 s hg38.chr14_KI270725v1_random 96229 1194 + 172810 AGATCCTGTCTTCCAAACTAACTAGATCAGATAACCTACCCTGGATTTTC-TCCTTTTAGGGTCTGTGAGCTGCAGTCACTTTTGTGAAAATGATTGCAATGACAAGAT-AGAGTTGTAGATGGGGAAAATGTTTTGACTAATTTAAGCATAGTGG-TAT---TTCATATGAGAATTGAAGT---TACAC-ACATTTGAAAATTATAATGGAGTCTCTTGGCTGAGCTTT--AAAAAAAATAG-CGTTTAGGCTAAACAGGGAACTG-CTACCTCTCCT-AAAATCAGAAAGATGTT-ACAGTAATTCTCCATTCTCTAGAATTATC-----------AGGAAGCACC-TTTGTGATGATTTACTTTTGGTCTTGGGA-----GTGTGAGCCCGTGTAGTCTTGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCATTCGTTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----GAAGTTTTGATCTT--------GCCA-----TTCCCAAATAACTCTCTTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatctttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctctgaaatacatccatggcctaacaacttctcaccactaataccactcatcctgacagcattctcacctaagtcactaccttttttctct-ggattacaatagcatcccaatttattt-----gctcaca-----ta-acctattta-----ttctacacggtgcaccagatacaccccattgtaatgcaaacacaatcatgttattctctggtgaaagtatctcatatattcctatcgcatttaaaattaattcagaatcatcccatgattatcaaaaccctacatgctctTCCACAACATGGTTTACTTCCAAGATATCTCTTCAACTCTTTTTT-CACTGTACTGAATTGGTGACTAATAGTCATATTTTTGTTTTTGCTCAAAAAGTCTTGACTTCTAAATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCAAATTG--------------CTTGCTTCCTTGAGATCTGCTCTCAAAGATACCCTTCATTTTCTACCTAATATTAATAACTTTAATCATTCACTATTCCATTACTATGCTCTATAGTGTATACAATTTCTGTTCTTTGTCATGTTATTAACTAAATT--ATTTATTTGT--T-------- s panTro5.chrY 332260 1196 + 26350515 AGATCCTGTCTTTCAAACTAACTAGATCAGATAACCTACCCTGGATTTTC-TCCTTTTAGGGTCTGTGAGCTGCAGTCACTTTTGTGAAAATGATTGCAATGACAAGAT-AGAGTTGTAGATGGGGAAAATGTTTTGACTAATTTAAGCACAGTGG-TAT---TTCATATGAGAATTTAAGT---TACAC-ACTTGTGAAAATTATAATGGAGTCTCTTGGCTGAACTTT-AAAAAAAAATAG-CATTTATGCTAAAAAGGGAACTG-CTGCCTCTCCT-AAAATCAGAAAGATGTTAACAGTAATTCTCCATTCTCTAGAATTATC-----------AAGAAGCACC-TTTGTGATGATTTACTTTTGCTCTTGGGA-----GTGTGAGCTCGTGTAGTCGTGGAACCATCAATTAGAACGGTGGCTTTCTGATCCCAAAGTCATTCGTCCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----GAAGTTTTGAGCTT--------ACCA-----TTCCCAAGTAACTCTCTTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatcttttagttctcc-----atttcactccctacactccaatttagctgcagttc-tctttgccagtcctatgaaatacatccatggcataacgacttctcaccactactaccactcatcctgacagcattctcatctaagtcactaccttttttctcc-ggattacagtagcctcccaatttattt-----gctcaca-----ta-acctatcta-----ttctacacagtgcaccagatacacccctttgaaatgcaaacactatcatgttattctctggtggaattatctcatatattcctatcgcatttaaaattaattcagaatcatcccatgattatcaaaaccctacatgctctTCCACAACATGGTTTACTTCCAAGATATCTCTTCAAATTTTTTTT-CACTGTACTGAATTGGAGACTAATAGTCATATTTTTGTTTTTGCTCAAAAAGTCTTGACTTGTAAATTTTTCAGTTT-CTCTTTTATCCACAGGTAA-CTC-CTTCCTCATAAGGTGAATTG--------------CTTGCTTACTTGAGTTCTGCTCTCAAAGATACCCTTCATTTTCTACCTAATATTAATAACTTTAATCATTCATTATTCCATTACTATGCTCTATAGTGTATACAATTTCTGTTCTTTGTCATGTTATTAACTAAATT--ATTTATTTGG--T-------- i panTro5.chrY C 0 C 0 s panPan2.chr7 74642952 1178 + 162613886 AGATCCTGTCTTCAAAACTAACTAGATCAGATAAACTACCCTAGATTTTC-CCCTTTTAGGGTCTGTTAACTGCAGTCACTTTTGTGAAAATGATTGCAATGAAAAGAT-AGAGTTATAGATGGGGAAAATGTTTTGACTAATTTAAGCATAGTGG-TAT---TTCATGTGAGAATTTAAGT---TATAC-ACATTTGAAAATTATAATGGAGTCTCTTGGCTGAGCTTT--AAAAAAAATAG-CATTTAGGCTAAAAAGGGAACTG-CTACTTCTCCT-AAAATCAGAAAGATGTT-ACAGTACTTCTCCATTCTCTAGAATTATC-----------AGGAAGCACC-TTTGTGATGATTTACTTTTGCTCTTGGGA-----GTGTGAACTTGTGTAGTCGTGGAACCATCAATTAGAA---------------CCCAAAATCATTCGTTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----GAAGTTTTTATCTT--------GCCA-----TTCCCAAGTAACTCTCTTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatctttaagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctatgaaatacatccatggcctaacgtcttctcaccactaataccactcatactaacagcattctcacctaagtcactacgttttttctct-ggattacaatagcctcccaatttattt-----gctcaca-----tg-acctattta-----ttctacacagtgcaccagatacacccctttgaaatgcaaacacaaacatgttattctctggtgaaa-tatctcatgtattcctatcgcatttaaaattaattcagaataatcccatgattatcaaaaccctacatgctctTCCACAACATGGTTTACTTCCAAGATATCTCTTCAACTTTTTTTT-CACTGTACTGAATTGGTGACTAATGGTCATATTTTTGTTTTTGCTCAAAAAGTCTTGACTTGTAAATTTTTCAGATT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCGAATTG--------------CTTGCTTCCTTGAGATCTGCTCTTAAAGATACCCTTTATTTTCTACCTAATATTAATAACTTTAATCATTCATTATTCCATTACTGTGCTCTATAGCGTATGCCATTTCTGTTCTTTGTCATGTTATTAACTAAATT--ATTTATTTGT--T-------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 5572 1197 - 150013 AGATCCTGTCTTCCAAACTAACTAGATCAGATAACCTACCCTGGATTTTC-TCCTTTTAGGGTCTGTGAGCTGCAGTCACTTTTGTGAAAATGATTGCAATGACAAGAT-AGAGTTGTAGATGGGGAAAATGTTTTGACTAATTTAAGCATAGTGG-TAT---TTCATATGAGAATTTAAGT---TACAC-ACATTTGAAAATTATAATGGAGTCTCTTGGCTGAGCTTTAAAAAAAAAATAG-CGTTTAGGCTAAAAAGGGAACTG-CTACCTCTCCT-AAAATCAGAAAGATGTT-ACAGTAATTCTCCATTCTCTAGAATTATC-----------AGGAAGCACC-TTTGTGATGATTTACTTTTGCTCTTGGGA-----GTGTGAGCCCGTGTAGTCGTGGAACCATCAATTAGAATGATGGCTTTCTAATCCCAAAGTCATTCGTTCGGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----GAAGGTTTGATCTT--------GCCA-----TTCCCAAGTAACTCTCTTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatctttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctctgaaatacatccatggcctgacgacttctcaccactaataccactcatactcatagcattctcacctaagtcactacctattttctgt-ggattacaatagcctcccaatttattt-----gctcaca-----ta-acctattta-----ttcttcacagtgcacgagatacacccctttgaaatgcaaacacagtcatgttattctctggtgaaattatctcatatattcctatcgcatttaaaattaattcagaatcatcccatgattatcaaaaccctacatgctctTCCACAGCATGGTTTACTTCCAAGATATCTCTTCAACTTTTTTTTCCACTGTACTGAATTGGTGACTAATAGTCATATTTTTGTTTTTGCTCAAAAAGTCTTGACTTGTAAATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTCTTTTTTTCATAAGGCGAATTG--------------CTTGCTTCCTTGAGTTCTGCTCTCAAAGATACCCTTCATTTTCTACCTAATATTAATAACTTTAATCACTCATTATTCCATTACTATGCTCTATAGTGTATACAATTTCTGTTC-TTGTCATGTTATTAACTAAAGT--ATTTATTGGT--T-------- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5667931 1189 + 72422247 AGATCCTGTCTTCAAAACTAACTAGATCAGATAACCTACCCTAGATTTTC-CCCTTTTAGGGTCTGTTAGCTGCAGTCACTTTTGTGAAAATGATTGCAATGAAAAGAT-AGAGTTGTAGATGGGGAAAATGTTTTGACTAATTTAAGCATAGTGGTTAT---TTAATATGAGAATTTAAGT---TACAC-ACATTTGAAAATTACAAT-GAGTCTCTTGGCTGAGCTTT-AAAAAAAAATAG-CGTTTAGGCTAAAAAGGGAACTG-CTACCTCTCCTAAAAATCAGAAAGACATT-ACAGTAATTCTCCATTCTCTAAAATTATC-----------AGGAAGCCCC-TTTGTGATGATTTACTTTTGCTCTTGGGA-----GTGTGAGCCTGTGTAGTCGTGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCATGCGTTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----GAAGTTTCGATTTT--------GCCA-----TTCCCAAGTAACTCTCTTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatctttgagttctcc-----atttcagtccctacactccagtttagctgcagttc-tcttggccagtcctgtgaaatacatccatggcctaacgacttctcaccactaataccactcatactaacagcattctcaccttagtcactaccttttttctct-ggattacaatagcctcccaatttattt-----gctcaca-----ta-acctactta-----ttctacacagtgcaccagatacacccctttgaaatgcaaacacaatcatgttattctctggtgaaattatcttatatattcctatcgcatttaaaattaattcagaataatcccatgattatcaaaaccctacatgctctTCCACAACATGGTTTACTTCCAAGATATCTCTTCAACTTTTTTTT-CACTGTACTGAATTGATGACTAATAGTCATATTTTTGTTTTTGCTCAAAAAGTCTTGACTTGTAAATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCGAATTG--------------CTTGCTTCCTTGAGTTCTGCTCTCAAAGATACCCTTCATTTTCTACCTAATATTAATAAC--TAATCATTCATTATTCCATTACTATGCTCTATAGTGTATACAATTTCTGTTCTTTGTCATGTCATTAAC-----T--ATTTATTTGT--T-------- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44106686 1180 - 99891981 AGATCCtgtcttcaaaactaactagatcagataacctaccctagattttc-accttttagggtctgttagctgcagtcacttttgTGAAAATGATTGCAATGAAAAGAT-AGAGTTGCAGATGGGGAAAATG-tttgactaatttaagcatagtgg-tat---ttaatatgagaagttaagt---tacacaatttttgaaaattataatggagtctcttggctgagcttt--aaaaaaaataa-catttaggctaaaaagggaactg-ctacctctcct-aaaatcagaaagatgTT-ACAGTAAATCCCTATTCTCTAGAATTGTC-----------AGGAAGCACC-TTTGTGATTATTTAATTTTGCTCTTGTGA-------GTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCATTCGTTCTGAAAACAATA-TTTTTCATAAATT------TGA-----GAAGTTTTGATCTT--------GCCA-----TTCCCGAGTAACTCTCTTAA-AAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatctttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctatgacatacatccatggcctaatgacttctcaccactaataccactcatactaacagcattctcacctaagtcactacttttcttctct-ggattacaatagcctcccaatttattt-----gcccaca-----ta-acctattta-----ttctacgcagtgcaccagatacacccatttgaaatgcaaacacaatcatgttattctctggtgaaattatctcatatattcctatcgcatttaaaattaattcaaaataatctcatggttatcaaaaccctacatgctctTCTACAACATGGTTTAGTTCCAAGATATCTCTTCAACTTTTTTTT-CACTGTACTGAATTG-TGAGTAATAGTCATATTTTTGTTTTTGCTCAAAAAGTCTTTACTTGTAAATTTTTCAGTTT-CTCCTTTATCCACCAGTAA-CTC-TTTTCTCCTAAGGCTAATTG--------------CTTGCTTCCTTGAGTTCTGCTCTCAAAGATACACTTCATTTTCTACCTAATATTAATAATTTTGATCATTCATTATTCCATTACCATGCTCTATAGTGTACACAATTTCTGTTCTTTGTCATGTTATTAACTAAA------TTATTTGT--T-------- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52337973 1192 + 185818997 AGATCCTGTTTCCAAAACTAACTAGATCAGGTAACCTACCCAAGATTTTC-ACCTTTTAGGGTCAGTTAGTTGCAGTCAC-TTTGTGAAAATGATTGCAATGAAAAGATAAGAGTTGCAGAT-GGGGGAATGTTTTGACTAATTTAAGCATAGTGG-TATTTATTAATATGAGAAGTT--GT---TACACAATTTTTGAAAATTATAATGGAGTCTCTTGACTGAGCTTT--AAAAAAAATAG-TGTTTAAGCTAAAAAGGGAACTG-CTACCTCTCCT-AAAATCAGAATGATGTT-ACAATAATTCTCTGTTCTCTAGAATTGCA-----------TCGAAGCACT-TTTATGATGATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCATTCATTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----gaagttttgatctt--------gcca-----ttcccaagtaattctcctaataagaggcatcagca-tgcttcagtgacagctgtcaccttccagtgctgagagtcatccttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctacgaaatacatccatgacctaacgacttctcaccactcataccactcataccaacagcattctcatctaagtcactaccttttttctctgggattacaatagcctcccaatttgttt-----gcccaca-----ta-acatattta-----ttctttacagtgtaccatatatatccctttgaaatgcaaacacaatcatgttattctctggtgaaattatctcacatattcctattgcatttaaaattgattcaaaataatcccatgataatcaaaaccctacatactctTATATAGCATGGTTTAGTTCCAAGATAGCTCTTCAACTTTTTTTT-CACTGTACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTGATTTATACATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGTTTCCTTGAAGTCTGCTCTCAAAGATTCTTTTCATTT----TCTAATATTAATAATTTTAATCATTCATTATTCTATTACTGTGTTCTATAGTGTATACAATTTCTGTTCTTTGTCATGttatttattaacta--aattattcat--t-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124983665 1192 - 192294377 AGATCCTGTTTCCAAAACTAACTAGATCAGGTAACCTACCCAAGATTTTC-ACCTTTTAGGGTCAGTTAGTTGCAGTCAC-TTTGTGAAAATGATTGCAATGAAAAGATAAGAGTTGCAGAT-GGGGGAATGTTTTGACTAATTTAAGCATAGTGG-TATTTATTAATATGAGAAGTT--GT---TACACAATTTTTGAAAATTATAATGGAGTCTCTTGACTGAGCTTT--AAAAAAAATAG-TGTTTAAGCTAAAAAGGGAACTG-CTACCTCTCCT-AAAATCAGAATGATGTT-ACAATAATTCTCTGTTCTCTAGAATTGCA-----------TCGAAGCACT-TTTATGATGATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCATTCATTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----GAAGTTTTGATCTT--------GCCA-----TTCCCAAGTAATTCTCCTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatccttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctacgaaatacatccatgacctaacgacttctcaccactcataccactcataccaacagcattctcatctaagtcactaccttttttctctgggattacaatagcctcccaatttgttt-----gcccaca-----ta-ccatattta-----ttctttacagtgtaccatatatatcccttcgaaatgcaaacacaatcatgttattctctggtgaaattatctcacatattcttattgcatttaaaattgattcaaaataatcccatgattatcaaaaccctacatactctTATATAGCATGGTTTAGTTCCAAGATAGCTCTTCAACTTTTTTTT-CACTGTACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTGATTTATACATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGTTTCCTTGAAGTCTGCTCTCAAAGATTCTTTTCATTT----TCTAATATTAATAATTTTAATCATTCATTATTCTATTACTGTGTTCTATAGTGTATACAATTTCTGTTCTTTGTCATGttatttattaacta--aattattcat--t-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 330937 1192 - 3123512 AGATCCTGTTTCCAAAACTAACTAGATCAGGTAACCTACCCAAGATTTTC-ACCTTTTAGGGTCGGTTAGTTGCAGTCAC-TTTGTGAAAATGATTGCAATGAAAAGATAAGAGTTGCAGAT-GGGGGAATGTTTTGACTAATTTAAGCATAGTGG-TATTTATTAATATGAGAAGTT--GT---TACACAATTTTTGAAAATCATAATGGAGTCTCTTGACTGAGCTTT--AAAAAAAATAG-TGTTTAAGCTAAAAAGGGAACTG-CTACCTCTCCT-AAAATCAGAATGATGTT-ACAACAATTCTCTGTTCTCTAGAATTGCA-----------TCGAAGCACT-TTTATGATGATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCATTCATTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----gaagttttgatctt--------gcca-----ttcccaagtaattctcctaataagaggcatcagca-tgcttcagtgacagctgtcaccttccagtgctgagagtcatccttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctacgaaatacatccatgacctaacgacttctcaccactcataccactcataccaacagcattctcatctaagtcactaccttttttctctgggattacaatagcctcccaatttgttt-----gcccaca-----ta-acatattta-----ttctttacagtgtaccatatatatcccttcgaaatgcaaacacaatcatgttattctctggtgaaattatctcacatattcctattgcatttaaaattgattcaaaataatcccatgattatcaaaaccctacatactctTATATAGCATGGTTTAGTTCCAAGATAGCTCTTCAACTTTTTTTT-CACTGTACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTGATTTATACATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGTTTCCTTGAAGTCTGCTCTCAAAGATTCTTTTCATTT----TCTAATATTAATAATTTTAATCATTCATTATTCTATTACTGTGTTCTATAGTGTATACAATTTCTGTTCTTTGTCATGttatttattaacta--aattattcat--t-------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7564168 1191 - 10077455 AGATCCTGTTTTCAAAACTAATTAGATCAGATAACCTACCCAAGATTTTC-ACCTTTTAGGGTCGGTTAGCTGCAGTCCC-TTTGTGAAAATGATCGCGATGAAAAGATAAGAGTTGCAGAT-GGGGAAATGTTTTGATTAATTTAAGCATAGTGG-TATTTATTAATATGAGAAGtt--gt---tacacaatttttgaaaattataatggagtctcttgactgagc-tt--aaaaaaaatag-tgtttaagctaaaaagggaactg-ctacctCTCCT-AAAAGCAGAATGATGTT-ACAATAATTCTCTGTTCTCTAGAATTGCA-----------TCGAAGCACT-TTTATGATGATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCGTTCGTTCTGAAAACAACA-TTTTTCATAAATTTGAAAGTGA-----gaagttttgatctt--------gcca-----ttcccaagtaattctcctaataagaggcatcagca-tgcttcagtgacagctgtcaccttccagtgctgagagtcatccttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctatgaaatacatccatgacctaacaacttctcaccactcataccactcataccaacagcattctcatctaagtcactaccttttttctctgggattacaatagccttcaaatttgttt-----gcccaca-----ta-acgtattta-----ttctttacagtgtaccatatataacccttcgaaatgcaaacacaatcatgttattctctggtgaaattatctcacgtattcctattgcatttaaaattgattcaaaataatgccatgattatcaaaaccctacatactctTATATAGCATGGTTTAGTTCCAAGATAGCTCTTCAACTTTTTTTT-CACTATACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTGATTTATATATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGTTTCCTTGAAGTCTGCTCTCAAAGATCCCTTTCATTT----TCTAATATTAATAATTTTAATCATTCATTATTCCATTACTGTGTTCTATAATGTATACtatttctgttctttgtcatgttatttattaacta--aattattcat--t-------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121504317 1194 - 127223203 AGATCCTGTTTTCAAAATTAACTAGATCAGATAACCTACCCAAGATTTTC-ACCTTTTAGGGTCGGTTAGCTGCAGTCAC-TTTGTGAAAATGATCGCAATGAAAAGATAAGAGTTGCAGATGGGGGAAATGTTTTGATTAATTTAAGCATAGTGC-TATTTATTAATATGAGAAGTTAAGT---TACACAATTTTTGAAAATTATAATGGAGTCTCTTGACTGAGCTTT---CAAATAATAG-CGTTTAAGCTAAAAAGGGAGCTG-CTACCTCTCCT-AAAATCAGAATGATGTT-ACAATAATTCTCTGTTCTCTAGAATTGCA-----------CTGAAGCACT-TTTATGATGATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCTTTCGTTCTGAAAACATTA-TTTTTCATAAATTTGAAAGTGA-----GAAGTTTTGATCTT--------GCCA-----TTCCCAAGTAATTCTCCTAATAAGAGGCATCAGCA-TGCTTCAGTGACAGCTGTCACCTTCCAGTGctgagagtcatccctgagttctcc-----atttcactccctacactccaatttagctgcagttc-tctcggccagtcctatgaaatacatccatgacctaacaacttctcaccactcatcccactcataccaacagcattctcatctaagtcactaccttttttctctgggattacaatagcctccaaatttgttt-----gcccacA-----TA-ACGTATTTA-----TTCTTTACAGTGTACCGTATATACACCTTCGAAATGCAAACACAATCATGTTATTCTCTGGTGAAATTATCTCACATATTCCTATTGCATTTAAAATTGATTCAAAATGATCCCATGATTATCAAAACCCTACATACTCTTATATAGCATGGTTTAGTTCCAAGATAGCTCTTCAACTTTTTTTT-CACTGTACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTGATTTATACATTTTTCAGTTT-CTTCTTTATCCACAGGTAA-CTC-TTTCTTCTTAAGGCTAATTC--------------CTTGTTTCCTTGAAGTCTGTTCTCAAAGATCCCTTTCATTT----TCTAATATTAATAATTTTAATCATTCATTATTCCATTACTGTGTTCTATAGTGCATACAATTTCTGTTCTTTGTCATGttatttattaacta--aattattcat--t-------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 613414 1192 + 1799296 AGATCCTGTTTTCAAAACTAATTAGATCAGATAACCTACCCAAGATTTTC-ACCTTTTAGGGTCGGTTAGCTGCAGTCCC-TTTGTGAAAATGATCGCGATGAAAAGGTAAGAGTTGCAGAT-GGGGAAATGTTTTGATTAATTTAAGCATAGTGG-TATTTATTAATATGAGAAGTT--GT---TACACAATTTTTGAAAATTATAATGGAGTCTCTTGACTGAGCTTT--AAAAAAAATAG-TGTTTAAGCTAAAAAGGGAACTG-CTACCTCTCCT-AAAAGCAGAATGATGTT-ACAATAATTCTCTGTTCTCTAGAATTGCA-----------TCGAAGCACT-TTTATGATTATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGGCTTTCTGATCCCAAAGTCGTTCGTTCTGAAAACAACA-TTTTTCATAAATTTGAAAGTGA-----gaagttttgatctt--------gcca-----ttcccaagtaattctcctaataagaggcatcagca-tgcttcagtgacagctgtcaccttccagtgctgagagtcatccttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctatgaaatacatccatgacctaacaacttctcaccactcataccactcataccaacagcattctcatctaagtcactaccttttttctctgggattacaatagcctccaaatttgttt-----gcccaca-----ta-acgtattta-----ttctttacagtgtaccatatataccccttcgaaatgcaaacacaatcatgttattctctggtgaaattatctcacatattcctattgcatttaaaattgattcaaaataatcccatgattatcaaaaccctacatactctTATATAGCATGGTTTAGTTCCAAGATAGCTCTTCAACTTTTTTTT-CACTATACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTGATTTATACATTTTTCAGTTT-CTCCTTTATCCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGTTTCCTTGAAGTCTGCTCTCAAAGATCCCTTTCATTT----TCTAATATTAATAATTTTAATCATTCATTATTCCATTACTGTGTTCTATAATGTATACAATTTCTGTTCTTTGTCATGTTATTTATTAACTA--AATTATTCAT--T-------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5171597 1199 - 6934359 AGATCCTGTTTTCAAAACTAGCTAGATCAGATAACCTACCCAAGATTTTC-ACCTTTTAGGGTTGGTTAGCTGCAGTCAC-TTTGTGAAAATGATTGCAATGAAAAGATAAGAGTTGCAGAT-GGGGAAATGTTTTGACTAATTTAAGCATTGTGG-TATTTATTAACATGGGAAGTTAAGT---TACACAATTTTTGAAAATTATAATGGAGTGTCTTGACTGAGCTTT-AAAAAAAAATAG-CGCTTAAGCTAAAAAGGGAACTG-CTACCTCTCCT-AAAATCAGAATGATGTT-ACAATAATTCTCTGTTCTATAGAATTATA-----------TCGAAGCACT-TTTGTGATGATTTAATTTTGCTTTTGTGA-----GTCTGAGCCTGTGTAGTCATGGAACCATCAATTAGAATGATGACTTTCTGATCCCAAAGTCGTTCGTTCTGAAAACAATA-TTTTTCATAAATTTGAAAGTGA-----gaagttttgatctt--------gcca-----ttcccaagtaattctcctaataagaggcatcagca-tgcttcactgacagctgtcaccttccagtgctgagagtcatccttgagttctcc-----atttcactccctacactccaatttagctgcagttc-tcttggccagtcctatgaaatacatccatgacctaacgacttcttacgactcataccactcatactaacagcattctcatctaagtcactaccttttttctctgggattacaatagtctcccaatttgttt-----gcccacg-----ta-acatattta-----ttcttcacaacataccatatataccccttcgaaatgcaaacacaatcatgctattctctggtgaaattatctcacatattcctatcacatttaaaattgattcagaataatcccatgattatcaaaaccctacatactcttgtATAGCATGGTTTAGTTCCAAGATAGCGCTTCAACTTTTTTTT-CACTGTACTGAATTGGTGAGTAATAGTCATATTATTGTTTTTGCTCAAAAAGTCTTCATTTATACATTTTTCAGTTT-CTCCTTTATCCACTGGTAA-CTC-TTTCCTCATAAGGGTAATTC--------------ATTGTTTCTTTGAAGTCTGCTCTCAAAGATCCCTTTCATTTTCTATCTAATATTAATAAATTTAATCATTCATTATTCCATTACTGTGTTCTAGAGTGTATACAatttatgttctttgtcatgttatttattaacta--aattattcat--t-------- i colAng1.NW_012115910v1 I 319 C 0 s calJac3.chr8 20042983 1212 + 128169293 AGATCCTATCTTCAAAACTAACTAGATCAGATAACCTACCCTAGATTTTTCACCATTTAGGGTCTGTTAGTTGCAGTCACTTTTGTGAAAATGATTGCAATGAAAAGAT-AAAGTTGCACATAGGGAAAATGTTTTGGCTAATTTAAGCATAGTGG-TAT---TTAACATGACAAGTTA-------CCAAAATTATTGAAAATTATAATGGTGTCTCCTGGCTGAGCTTA--GAAAAAA--AA-CATTTAGGCTAAAAAGGGAACTG-CCACCTCTCCT-AAAATCAGAATGCTGTT-ACAGTAATTCTCTATTCTCTAGAATTGTC-----------TAGAAGCAGC-TTTGTGATGATTTAATTTTGCTCTTGTGA-----GTTCGAACTTCTGTAGTTATGGAACCATCAATTAGAATGATAGCTTTCTGATCCCAAAGTCATCAGTTCTGAAAACAAAA-TTTTTTGTAAATTTGAAAGTGAGTTTTGATCTTCTGATCTT--------GCCA----CTCCCCAAGTAACCCTCGTATTAAGAGGCATCAGCGTTGCTTCAGTGACAGCTGCCATATTCCAGTGctgagagtcacctttgctttctcc-----attttactccctacactctgatttagctgcagttc-tcttggccagtcctttgaaatacatccatggcctaaccacttctcaccactcataccacttacattaacagcattctcatctaagccacaaccttttttctct-ggactacaatagcctcttaatttattt-----gtgcact-----ta-acctattta-----ttctccacagtgcaccagatatacccctttgaagtgcaaacacaatcatgttattctgtggtgaaattatctcatgtattcctatcgcattttaaattaattcaaaataatttcatgattatcaaaaccctacatgctcttatcTAACATGGTTTAATTCCAAGATATGTCTTCAACTTTTTATT-CACTGTAGTGCATTGATGAGTAATAGTCATA-TTTTCTTTTTGCTCAAAAAGTCTTGCCATATAAATTTTTCAGTTT-CTCCTTTATTCACAGGTCA-GTC-TTTCCTCATAAATCTAATTCCTTTATGAGGAAAGCTTGCTTCCTTGAGGTCTATTCTCAAATATCCCCTTCATTTTCTATCCAAAATTAATAACTTTAATCATTCATTATTCCATTACTATGCTCTGTGGTGTATATAATTTCTGTTCTTTGTGATGTTATTTAGTATTTATTGATTATTTGTT---------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17628648 1192 + 18371965 AGATCCTGCCTTCAAAACTAACTAGATCAGATAACCTACCCTAGATTTTT-ACCACTTAGGGTCTGTTAGTTGCAGTCAC-TTTGTGAAAATGATTGCAATGAAAAGAT-AAAGTTGCACTTAGGGAAAATGTTTTGACTAATTTAAGCATAGCGG-TAT---TTAATATGACAAGTTG--------CAAATTTTTTGAAAATTATAATGGTGTCTCTTGGCTGAGCTTA--AAAAAAA--AA-AATTTAGGCTGAAAAGGGAACTG-CCACCTCTCCT-AAAATCAGAATGCTGCT-ACAGTAATTCTCTATTCTTTAGAATTGTC-----------TAGAAGCAGC-TTTGTGATTATTTAATTTTGCTCTCGTGA-----GTTCCAGCTTCTGTAGTCATGTAACCATCAATTAGAATGATAGCTTTCTGATCCCAAAGTCATTAGTTCTGAAAACAACATTTTTTTGTAAATTTGAAAGCGAGTTTTGATCTTTTGATCTT--------GCCA----CTCCCCAAGTAACCCTCGTAATAAGAGGCATCAGCATTGCTtcagtgacagctgccaccttccattgctgagtg--atcttcacgttctcc-----attttactccctacactcggatttagctgcagttc-ttttggctagtcctctgaaatatatccatggcctaaccacttctcaccactcatgccacttatattaacagcattctcatctaagccacaaccttttttctct-ggactacaatagcctcttaatttattt-----gtgcact-----ta-atctattta-----ttctccacagtgcaccagatatacccctttgaaatgcaaacgcaatcatatcattttctggtgaaattatctcatgtattcctattacatttaaaattaattcaaaataattccatgattaccaaaaccctacatgctctTACCCAGCATGGTTTAATTCCAAGATATGTCTTCAACTTTTTATT-AATTGTAGTGCATTGGTGAGTAATAGTCATATTTTTCTTTTTGCTCAGAAAGTCTTGACATATGAATTTTTCAGTTT-CTCCTTTATTCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGCTTCCTTGAGGTCTACTCTCAAAGATCCCCTTCATTTTCTATCTAAAATTAATAACTTTAATCATTCATAATTCCATTACTATGCTCTGTAGTGTATACAATTTCTGTTCTTTGTGATGTTATTTAGTAAGTA--AATTATTTAT----------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2163416 1187 - 3566421 AGATCCTGTCTTCAAAACTAACTAGAACAGATAACCTACCCTAGATGTTC-ACCATTTAGGGTCTGTTAGTTGCAGTCACTTTTGTGAAAATGATTGCAATGAAAAGAT-AAAGTTGCACATAGGGGAAATGTTTTGAATAATTTA------------AT---ATGACAAGTTAAGTTA--------CAACATTTTTGAAAATTACAATGGTGTCTCTTGCCTGAGCTTA--AAAAAAA--AACCATTTAGGCT-AAAAGGGAACTG-CCACCTCTCCT-AAAATCAGAATGCTGTT-ACTGTAATTCTCTATTCTCTAGAATTGTC-----------TAGAAGCAGC-TTTGTGATGATTTAATTTTGCTCTTGTGA-----GTTCGAGCTTCTGTAGTCACGGAACCATCAATTAGAATGATAGCTTTCTGATCCCAAAGTCATTAGTTCCGAAAACAACA-TTTTTTGTAAATTTGAAAGTGAGTTTTGATCTTCTGATCTT--------GCCA----CTCCCCAAGTAGCCCTCCTAATAAGAGGCATCAGCATTGCTTCAGTGACAGCTGCCAACTTCCACTGctgagagtcatctttgtgttctcc-----attttatcccctacactctgagttagctgcagttc-tctcggccagtcct-tgaaacatatccatggcctaaccacttctcaccactcattccacttacgttaacagcattctcacctaagccacaaccttttttctct-ggattacagtagcctcctaacttattt-----gtgcacttaaccta-acctattta-----ttctccacagtgcaccagatatacctcttcgaaatgcaaacgcaatcatgttattctctggtgaaattatctcatgtattcctatcgcatttaaaattaattcaaaataattccatgattatcaaaaccctatatgctcttatcTAGCATGGTTTAATTCCAAGATATGTCTTCAACTTTTTATT-CACTGTAGTGCATTGGTGAGTAATAGTCATATCTTTCTTTTTGCTCAGAAAGTCTTGACATATGAATTTTTCAGTTT-CTCCTTTATTCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTC--------------CTTGCTTCCTTGAGGTCTACTCTCAAAGATCCTCTTCATTTTCTATCTAAaattaataattttaatcattaattattccattactaTGCTCTGTAGTGTATAAAATTTCTGTTCTTTGTGATATTATTTAGTGAGTA--AATTATTTAT----------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7363062 1172 + 9267652 AGATCCTGTCTTCAAAACTAACTAGATCAGATAGCCTACCCTAGATTTTC-ACCATTTAGGGTCTGTTAGTTGTTGTCACTTTTGTGAAAATGATTGCAATGAAAAGAT-AAAGTTGCACATAGGGAAAATGTTTTGACTAATTTAAGCATGG-GG-TAT---TTAACATGACAAGTTAAGT---TACAAAATTTTTGAAAATTATAATGGTGTCTCTTGGCTGAGCTTA--AACAAAA--AA-CATTTAGGCTAAAAAGGGAACTG-CGACCTCTCCT-AAAATCAGAATGCTGTT-ACAGTAATTCTCTATTCTCTAGAATTGTC-----------TAGAAGCAGCTTTTGTGATGATTTAATTTTGCTCTTGTGA-----GTTCGAGCTTCTGTAGTCATGGAACCATAAATTAGAATGATAGCTTTCTGATCCCAAAGTCATTAGTTCTGAAAACAATA-ATTTCTGTAAATTTGAAAGTGAGTTTTGATCTTCTGATCTT--------GCCA----CTTCCCAAGTAACCCTCGTAATAAGAGGCATCACCATTGCTTCAGTGACAGCTGCCACct----------------------------tcc-----attttactccctacactctgatttagctgcagttc-tcttggccagtcctttgaaatacatccttggcctaaccacttctcaccactcataccacttaaattaacagcattcttatctaagccacaaccttttttctct-ggattacaatagcttcctaatttattt-----gcgcact-----ta-acctattta-----ttctccacagcgcaccagatatacccctttgaaatgcagacacaatcatgttattctctggtgaaattacctcatgtattcctatcgcatttaaaattcattcaaaataattccatgattatcaaaaccctacatgctcttatccAGCATGGTTTAATTCCAAGATATGTCTTCAACATTTTATT-CACGGTAGTGCAGTGGTGAGTAATAGTCATATTTTTCCTTTTGCTCAGAAAGTCTTGACATATAAATTTTTCAGTTT-CTCCTTTATTCACAGGTAA-CTC-TTTCCTCATAAGGCTAATTT--------------CTTGCTTCCTTGATGTCTACTCTCAAAGATCCCCTTCATTTTCTATCTAAaattaataattttaatcattcattattccattactaTGCTCTGTAGTGTATACAATTTCTGTTCTTTGTGATGTTATTTAGTAAGTA--AATTATTTAT-T--------- i aotNan1.NW_018514471v1 C 0 I 20 s canFam3.chr18 4069399 1211 + 55844845 -GATTCtgtcctcaaaactaattagacaagataacctaatccagattccc-attctttaaagtctgttagctgcagtcatttttggaataatTACTGCAACTCAAAGAC-ACAGTTGTAGAT----AAACTGTGTTGACTAGTATAAGCACAGAGG-AAT---TGAATGCGAGTAATTAAACATGTACATAATTGTTGGAGATGATGGTGCAATCTCTTGGCTGACCTTT-----AAATATGA-ATCTCCGGCTAGAAAGGAAGTTACCTACCTCTGTC-CAAACCAGAA-----TT-GCACTAATT-TCTA-TCTCCAGAATTACCTTCTGGAGTAATTTAATTACT-TTCATGGTAATTTAA-TTTGCTCTCATGGATTATATCTGAGCCTGTACAGTCATG-AGCTACACAATGGAATGCTCGCTTCCTGACTGCAAAATCATTGGTTCTGGAGACAACa-cttgccatgaatctccaaatta-----gaatttattattttccttttgaaccagttattctccaagca--tcttatagtaaaagtcatcatcattctttcactgaatgggctcatcttctagagcttggagtcatccttgaattctcccatttctcttactcccttca-tgcaatttatccatagctcttctttgcacttcctttaaaacgtatccatgtactgaccacttgccaccacttac-cctctcac--------cattc-aatccaagtcactaccttttttctca-ggatcactagagcccccagacttgtttttctggctcttc-----tgtacccgtttactcttttctccaaagtgtaccag--------tgttgaaatataaacaagatcatgctatcccctggtaaacttatctaatgtgttcttatcacatttaaagttaattcaaaataacaccgtggttgacaagaccctacatgctctTTTAAGTTATGGTCTGTTTCTGGGATGTCTCTTTGACTTGTCTTT--ACTGTGCTGAGTCA--TAGGGATCCTCACATCTTTGCCCTTGCTCAAAAACTCTTGACTCATACATTTTTTAAATTGTTCCTTTATCCACAGAAGCTCTC-TTTCCCCTTATCGGGCACTC--------------CTTGCTTTTCGAAAGTCTACTCTCAAAAG----CTTTATTTTCTGTGTAAATATAATAGTTTTAaacattcattacccctttacaatgctctattatgtatacaacttctagtctttgtaatattaattgatcagtt--aattaattac--taatttgtt i canFam3.chr18 C 0 C 0 a score=192644.000000 s hg38.chr14_KI270725v1_random 97423 30 + 172810 CCAGTAACGTATTCCATAAATATTATACAC s panTro5.chrY 333456 30 + 26350515 CCAGTAACGTATCCCATAAATACTGTACAC i panTro5.chrY C 0 C 0 s panPan2.chr7 74644130 30 + 162613886 CCAGTAACATATTCCATAAATATTGTACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 6769 30 - 150013 CCAGTAATTTATTCCATAAATATTGTACAC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5669120 30 + 72422247 CCAGTAACGTATTCCATAAATATTGTACAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44107866 30 - 99891981 TCAGTAATGTATCCCATAAATATCGTGCAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52339165 24 + 185818997 t-----atttattACATAAAT-TTGTACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124984857 29 - 192294377 tcagtaatttattACATAAAT-TTGTACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 332129 29 - 3123512 tcagtaatttattACATAAAT-TTGTACAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7565359 29 - 10077455 tcagtaatttattCCATAAAT-TTGTACAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121505511 29 - 127223203 tcagtaatttattCCATAAAT-TTGTACAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 614606 29 + 1799296 TCAGTAATTTATTCCATAAAT-TTGTACAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5172796 29 - 6934359 tcagtaatttattCTACAAAT-TTGTACAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20044195 30 + 128169293 TCTGTAATATATTCCATACATATTGTGCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17629840 28 + 18371965 --TGGTATATATTCCGTACATATTGTGCAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2164603 28 - 3566421 --TGATATATATTCCATACATATGGTGCAT i cebCap1.NW_016107540v1 C 0 C 0 s canFam3.chr18 4070610 30 + 55844845 tatgtattttattacataaactctatgagg i canFam3.chr18 C 0 C 0 e aotNan1.NW_018514471v1 7364234 20 + 9267652 I a score=2184747.000000 s hg38.chr14_KI270725v1_random 97453 193 + 172810 ATAAAAAT--TG--------------------TTATTTTTATTGCTGTATGCTCAGCTGCCCAATAACAGTCTGAGGATTAACATATTTGTTAAATGCACAAATACGTTCTTTCATAAATTTTAGTTTAATAATTTTATATT-AAACTCCCTCTATATTTACAATATGAATTAGATCATTCAGAATAAACATTCCAGTGGAAAAAACTAAACAATT s panTro5.chrY 333486 195 + 26350515 ATAAAAATTATG--------------------TTATTTTTATTGCTGTATGTTCAGCTGCCCAATAACAGTCTGAAGATTAGCATACTTGTTAAATGCACAAATACATTCCTTCACAAATGTCAGTTTAATAATTTTATATT-AAACTCCCTCTATACTTACAATATGGATTAGATAATTCAGAATAAACATTCCATTGGAAAAAACTAAACAATT i panTro5.chrY C 0 C 0 s panPan2.chr7 74644160 195 + 162613886 ATAAAAGTTATG--------------------TTATTTATATTGCTGTATGCTCAGCTGCCCAACAACAGTTTGAGGATTAACATATTTGTTGAATGCACAAATACATTCTTTCACAAATATTAGTTTAATAATTTTATATT-AAACTCCCGATACACTTACAATATGAATTAGATAATTCAGAATAAACATTCCATTGGAAAAAACTGAACAATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 6799 195 - 150013 ATAAAAATTATG--------------------TTGTTTTTATTGCTGTATGTTCAGCTGCCCAATAACTGTTTGAGGATTAACATATTTGTTAAATGCACAAATACATTCTTTCACAAATATTAGTTTAATAATTTTATATT-AAACTCCCTATATACTTACAATATGAATTAGATAACTCAGATGAAACATTCCGTTGGAGAAAACTAAACAATT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5669150 195 + 72422247 ATAAAAATTATG--------------------TTATTTTTATTGCTGTATGCTCAGCTGCCCAATAACAGGTTGAGGATTAACATATTTGTTAAATGTACAAATACATTCTTTCACAAATGTTAGTTTAATAATTTTATATT-AAACTCCCTATATACTTACAATATGAATTAGGTAATTCAGAATAAACATTCCATTGGAAAAAACTAAACAATT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44107896 193 - 99891981 ATAAAAATTATG--------------------TTATTTTTATTGCTGTATGCTCAGCTGCCCAATAACAGTTTGAGGATTAACATATTAGTTAAATGGACAAATACATTCTTTCACAAATATTAGTTTAATAATTTTATATT-AAACTCCCTATATACTT--AATATGAATTAGATAACTCAGAATAAATATTCCATTGGAAAAAACTAAACAATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52339189 195 + 185818997 ATAAAAATTATG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTTGAGGATTAATATATTTGTTAAATGGACAAATACATTCTTTCACAAATATCAGTTTAAAATTTTTATATT-AAACTCCCTATATACTTAAAATGTGAATTAGATAATTCAGAATAAACATTCCATTGGAAAAAACTAAACAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124984886 195 - 192294377 ATAAAAATTATG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTTGAGGATTAATATATTTGTTAAATGGACAAATACATTCTTTCACAAATATCAGTTTAAAATTTTTATATT-AAACTCCCTATATACTTAAAATGTGAATTAGATAATTCAGAATAAACATTCCATTGGAAAAAACTAAACAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 332158 195 - 3123512 ATAAAAATTATG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTTGAGGATTAATATATTTGTTAAATGGACAAATACATTCTTTCACAAATATCAGTTTAAAAATTTTATATT-AAACTCCCTATATACTTAAAATGTGAATTAGATAATTCATAATAAACATTCCATTGGAAAAAACTAAACAATT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7565388 195 - 10077455 ATAAAAATTATG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTTGAGGATTAATATATTTGTTAAATGGACAAATACATTCTTTCACAAATATTAGTTTAAAATTTTTATATT-AAACTCCCTATATACTTAAAATATGAATTAGATAATTCAGAATAAATATTCCATTGGATAAAACTAAACAATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121505540 195 - 127223203 ATAAAAATTATG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTTGAGGATTAATATATTTGTTAAATGGACAAATACATTCTTTCACAAATATTAGTTTAAAAATTTTATATT-AAACTCCCTATATACTTAAAATATGAATTAGATAATTCAGAATAAATATTCCATTGGATAAAACTAAACAATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 614635 195 + 1799296 ATAAAAATTATG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTTGAGGATTAATATATTTGTTAAATGGACAAATACATTCTTTCACAAATATTAGTTTAAAATTTTTATATT-AAACTCCCTATATACTTAAAACATGAATTAGATAATTCAGAATAAATATTCCATTGGATAAAACTAAACAATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5172825 193 - 6934359 ATAAAAAT--TG--------------------TTATTTTTATTGCTATATGCTCAGCTGACCAATAACAGTTAGAGGATTAATATATTTGTTAAATGAACAAATACACTCTTTCACAAATATTAGTTTAAAAATTTTATATT-AAACTCCCTATATACTGAAAATATGAATTAGATAATTCAGAATAAACATTCCATTGGAAAAAGCTAAACAATT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20044225 199 + 128169293 ATAAAATTTAGG----------------TTTTTTTTTTTTTTTGCTATATACTCAGCTGCCCAATAACAGTTTGAGGATTAACATATTTGTAAAATGGACAAATGCACTCTTTCACAAGTATTAGTTTCATAATTTTATATT-AAACTCCCTAAATACTTGCAATATGAATTAGATAATTCAGAATAAACATTCTATTGGAAAAAACTAAGCAATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17629868 215 + 18371965 ATAAAAATTAGGTGtttttttttttttttttttttttttttttACTGTATGCTCAGCTGCCCAATAACAGTTTGAGGATTAACATATTTGTAAAATGGACAAATACACTCTTTCACAAGTATTAGTTTAATAATTTTATATT-AAACTCCCTATATACTTGCAATATGAATTAGATAATTCAGAATAAACATTCTTTTGGGATAAACTAAGAAATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2164631 193 - 3566421 ATAAACATTAGA----------------------GTTTTTTTTGCTGTATGCTCAGCTGCCCAATAACAGATTGAGGATTAACATATTTGTAAAATGGACAAATACATTCTTTCACAATTATTAGTTTAATAATTTTATATT-TAACTCCCTATATGCTTGCAATATGAATTAGATAATTCAGAATAAACATTCTATTGGAAAAAACTAAGAAATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7364254 206 + 9267652 ATAAAAATTAGG---------GtttttttttttttttttttttGCTGTATGCTCAGCTGCCCAATAACAGTTTGAGGATTAGCATATTTGTAAAATGGGCAAATACACTCTTTCACAAGTATTAGTTTAATAATTTTATATT-AAACTCCCTATATACTTGTAATATGAATTAGATAACTCAGAATAAACATTCTATTGGAAAAAACTAAGCAATA i aotNan1.NW_018514471v1 I 20 C 0 s canFam3.chr18 4070640 194 + 55844845 atagacaataag--------------------tcatttgtattgttgtatgctcaggtccccagtcacagcttggcagttaatgtatttgttaaatggatgaatAAATTATTTCACAAGTACCAGTGTAGTAATTTTAAATCAAAACTTCC--CATAATTGCAATGTTGACTAGAAAATTCAAAATAAGCATTTCACCAAAGAAAATTGAACAATT i canFam3.chr18 C 0 I 4772 a score=6170306.000000 s hg38.chr14_KI270725v1_random 97646 651 + 172810 TG-TTATAAAACAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCAAATTAAGAATGGTATGCAAGCCTGTTTGTGAGGCTTATGTTTGGGTAATCTCTTTACTTAGAG-TGACTGTAAATCTCAAAAGAGGATTAAACTGAGA-AATAACTCTATCAACTCACATGGTAAGGGTATTTAAACATATCTTAGTAATGGAGAAAATTGaaag-aaaagaa-aaaagataaagggagaa--agagaaacagagcgaaagggataatgaaggagagaaagaagaagagaaaggaagaggaagaaaagtaaa---gaggaggagggagagggagg----aagaAAGGTG-AAAAGAAAG--AATGCTAAAGTTTTTAACAACATAATTTATCCttctagaatatgaatgttggtctatttgatgatgtcccacagattccttagtctctgctc-a-tttttta------------tctgtttctcagagtcaatattttcccttttcttatcttcaagctcatgacttcttc-tgtgtgt-gcaaatatactcttaaatccctctggtgatttttaaattttgatcgttgtagttttccactccagaatttctgctatctc--tgttgatattcctacattttaata-ttttttctgaatcctttatttctttg s panTro5.chrY 333681 648 + 26350515 TG-TTATAAAACAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCAAAATAAGAATGGTATGGAAGTCTGTTTGTGAGGCTTATGTTTGGGTTATCTCTTTACTTAGAG-TGACTATAAATCTCAAAAGAGAACTAAAGGGAGA-AATAACCATATCAACTCACATGGTAAGGGTATTTAAAC--ATCTTAGTAATTGAGATAATTgaaag-aaaagag--------aaagggagaa--ggagaaacagagcaaaaggggtaatgaaggagag--agaagaagagaaaggaagaggaagaaaagtaaaaaggaggaggagggggagggaggaagaaagaaaggtg-gaaagaaag--aCTGCTAAAGTTTTCAACAACATAATTTATCCTTTTAGaatatgaatgttggtctatttcataatgtcccacagattcattaatgtctgctc-a-tttttta------------tctgtttctcagagtcaatgttttccattttcttatcttcaagctcatgtcttcttc-tgtgtgt-gcaaatatactcttaaatccctctggtgatttttatatttttatcgttgtagttttccgctccagaatttccgttatctc--tgttgatattcctattttttaatatttttttcagattccttgatttctttg i panTro5.chrY C 0 C 0 s panPan2.chr7 74644355 642 + 162613886 TG-TTATAAAACAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAACGAAGAATTACAGG---ACCAAATTAAGAATGGTATGGAAGCCTGTTTGTGGGGCTTATGTTTGGGTTATCTCTTTACTTAGAG-TGACTATAAATCTC-----AGAACTAAAGGGATA-AATAACCATATGTACTAACATGGTAAGGGTATTTAAACATCTCTTAGTAATTGAGAAAATTGaaagaaaaagag--------aaagggagaa--agagaaacagagcgaaagggataatgaaggagag---aaataagagaaaggaagaggatgaaaagtaaaaaggaggaggaggaggaggaaga----aagaaaggtg-aaaagaaaG--AATGGTAAAGTTTTTAACAACATAATTTAACtttctagaatatgaatgttggtctatttgatgatgtcccacagattccttagtctctgctc-a-tttttta------------tctgtttctcagagtcaatattttccattttcttatcttcaagctcatgacttcttc-tgtgtgt-gcaaatatactcttaaatccctctggtgattttttaatttttatcattgtagttttccactccagaatttctgttatctctttgttgatagtcctactttttaata-ttttttctgattcctttatttctttg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 6994 666 - 150013 TG-TTATAAAAGAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCAAATTAAGAATGGTATGCAAGCCTGTTTGTGACGCTTATGTTTGGGTTATCTCTTTACTTAGAG-TGACTATAAATTTCAAAAGAGAACTAAAGGGAGA-AATAACCATATCTACTAACATGGTAAGGGTATTTAAACATCTCTTAGTAATTGagaaaattgaaag-aaaagac-aaaag--aaagggagaa--agagaaacagagcgaaagggataatgaaggagag----aagaagagaaaggaagaggaagaaaagtaaaaaggtgtaggagggggagggaggaagaaagaaaggtg-aaaagaaag--aaTGCTAAAGTTTTCAACAACATAATTTATCCttctagaatatgaatgttggtctatttgatgatgtcccacagattccttagtctctgctc-a-ttttttatttgatattctttctgtttctcagagtcagtattttccattttcttatcttcaagttcatgacttcttc-tgtgtgt-gcaaatatactctgaaatccctctggtgatttttgaattattatcattgtagttttccactccagaatttctgttatctctttgttgatattcctgctttttaata-ttttttctgattcctttatttctttg i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5669345 641 + 72422247 TG-TTATAAAACAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCAAATTAAGAATGGTATGGAAGCCTGTTTGTGAGGCTTATGTTTGGGTTATCT-----CTTAGAG-TGACTATAAATCTCAAAAGagaactaaagggaga-aataaccatatctactaacatggtaagggtatttaaacatctcttagtaattgagaaaaTTgaaag-aaaagaa-gag----aaagggagaa----agaaacagaacaaaagggataatgaaggagagaaagaagaagagaaaggaagaggaagaaaagtaaa---------gagggggagggaggaagaaagaaaggtg-aaaagaaag--aaTGGTAAAGTTTTTAACAACATAATTTATCCTTCTGGaatatgaatgttggtctatttgatgatgtcccacagattccttagtctctgctc-a-tttttta--------tttttctgtttctcagagtcagtattttccattttcttatcttcaagttcatgacttcttc-tgtgtgt-gcaaatatactcttaaatccctctggtgatttttaaatttttatcattgtagtttcctactccagaatttctgttatctctttgttgatattcctactttttaatatttttttctaattcctttatttc---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44108089 654 - 99891981 TG-TTATAAAACAT-CCTTAAAAGTGTCAGAAAGTTAATATAGCAATGAAGAATTACAGG---ACCAAATTAAGAATGGTATGTAAGCCTGTTTGTGAGGCTTATGTTTGGGTTATCTCTTTACTTAAAG-TGACTATAAATCTCAAAAAAGAACTAAAGGGAGA-AATAACCATATCTACTAATGCAGTAAGGGTATTTAAACATCTCTTAGTAATTGagaaaattgaaag-aaaagaa-aaaagagaaagggagag----agaaacagagcaaaagggataatgaaagagagaaagaagaagagaaaggaagaggaagaaaagtaaaaaggaggaggaaggggagggagg-----------------aagaAAG--AATGGTAACGTTTTTAACAACATAATTTATCCTTTTAGaatatgaatgttggtctatttgatgatgtcccacagattccttagtctctgttc-a-ttttttatttgttattctttctgtttctcagagtcaatattttccattttcttatcttctagctcatgacttcttc-tgtgtgt-gcaaatatactcttgaatccctctggtgatttttaaatttttatcattgtagttttcaactccag-acttctgttatctctttgttgatattcttactttttaatatttttttctgattcctttatttctttg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52339384 674 + 185818997 TGTTTAAAAAAAAG-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGA---ACCAAATTAAGAATGGTATGGAAGTCTGTTTGTGAGCCTTATGTTTGGGTTATCTCTATACTTAAAG-TGATGATAAATCTCAAAAGAGAAATGAAGGGAGA-AATAACTATATCTACTAACACGGTAAGGGTATTTAAACATCTCTTAGTAATTGAGAAAATTGaaag-aaaagaa-aaaagagaaagggagggagagagaaacagagcaaaagggataatgaaggagagaaagaagaagagaaaggaagaggaaaaaaagtaagaaGGAGGAAGGAGGAGAGGGAGGAAGAGAGAAAGGTGAAAAAGAAAG--AATGGTAAAGTTTTTAACAACATAATTTATCCTTTTAGaatatgaatgttggtctttttgatgatgtcccacagattccttagtctctgttc-a-ttttttatgtgttattctttctgtttgtcagagtcaatattttccattttcttatcttcaagctcatgacttcttc-tgtgtgt-gcaaatatactcttgaatccctctggtgatttttaaatttttatcattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttctaattcctttatttctttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124985081 674 - 192294377 TGTTTAAAAAAAAG-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGA---ACCAAATTAAGAATGGTATGGAAGTCTGTTTGTGAGCCTTATGTTTGGGTTATCTCTATACTTAAAG-TGATGATAAATCTCAAAAGAGAAATGAAGGGAGA-AATAACTATATCTACTAACACGGTAAGGGTATTTAAACATCTCTTAGTAATTGAGAAAATTGAAAG-AAAAGAA-AAAAGAGAAAGGGAGGGAGAGAGAAACAGAGCAAAAGGGATAATGAaggagagaaagaagaagagaaaggaagaggaaaaaaagtaagaaggaggaaggaggagagggaggaagagAGAAAGGTGAAAAAGAAAG--AATGGTAAAGTTTTTAACAACATAATTTATCCTTTTAGaatatgaatgttggtctttttgatgatgtcccacagattccttagtctctgttc-a-ttttttatgtgttattctttctgtttgtcagagtcaatattttccattttcttatcttcaagctcatgacttcttc-tgtgtgt-gcaaatatactcttgaatccctctggtgatttttaaatttttatcattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttctaattcctttatttctttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 332353 673 - 3123512 TGTTTAAAAAAAAG-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGA---ACCAAATTAAGAAGGGTATGGAAGTCTGTTTGTGAGCCTTATGTTTGGGTTATCTCTATACTTAAAG-TGATGATAAATCTCAAAAGAGAAATGAAGGGAGA-AATAACTATATCTACTAACACGGTAAGGGTATTTAAACATCTCTTAGTAATTGagaaaattgaaag-aaaagaa-aaaagagaaagggagggagagagaaacagagcaaaagggataatgaaggagagaaagaagaagagaaaggaagaggaaaaaaagaaagaaggaggaaggaggagagggaggaagagagaaaggtg-aaaagaaag--aaTGGTAAAGTTTTTAACAACATAATTTATCCTTTTAGaatatgaatgttggtctttttgatgatgtcccacagattccttagtctctgttc-a-ttttttatgtgttattctttctgtttgtcagagtcaatattttccattttcttatcttcaagctcatgacttcttc-tgtgtgt-gcaaatatactcttgaatccctctggtgattttaaaatttttattattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttctaattcctttatttctttg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7565583 673 - 10077455 TGTTAAAAAAAAAATCCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCAAATTAAGAATGGTATGGAAGTCTGTTTGTGAGCCATATGTTTGGGTTATCTTTATACTTAAAG-TGACTATAAATCTCAAAAGAGAACTGAAGGGAGA-AATAACTATATCTACTAACATGGTAAGGGTATTTAAACATTTCTTAGTAATTGagaaaattgaaag-aaaagaa-aaaagagaaagggagagagagagaaacggagcaaaagggataatgaaggagagaaagaagaagagaaaggaagaggaagaaaagaaagaaggaggacgagggagagggaggaagaaagaaaggtg-aaaagaaag--aATGGTAAAGTTTTTAACAACGTAATTTATCCTTTTAGaatatgaatgttgggctttttgatgatgtcccacagattccttagtctctgttc-atttttttatgtgttattctttctgtttctc--agtcaatattttccattttcttatcttcaagctcatggcttcttc-tgtgtgt-gcaaatatactcttgaatccctttggtgatttttaaatttttatcattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttgtaattcctttatttctttg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121505735 669 - 127223203 TG-TTAAAAAAAAT-CCTTAAAAGCATCAGAAAGTTAATACAGCCATGAAGAATTACAGG---ACCAAATTAAGAATGGTATGGAAGTCTGTTTGTGAGCCTTATGTTTGGGTTATCTTTATACTTAAAG-TGACTATAAATCTCAAAAGAGAACTGAAGGGAGA-AATAACTATATCTACTAACATGGTAAGGGTATTTAAATATTTTTTAGTAATTGagaaaattgaaag-aaaagaa-aaaagagaaagggagagagagagaaacggagcaaaagggataatgaaagagagaaagaagaagagaaaggaagaggaagaaaag---tgaggaggactagggagagggaagaagaaagaaaggtg-aaaagaaag--aATGGTAAAGTTTTTAATAACATAATTTATCCTTTTAGaatatgaatgttggtctttttgatgatatcccacagattccttagtctctgttc-t-ttttttatgtgctattctttctgtttctcagagtcaatattttccattttcttatcttcaagctcatgacttcttc-tgtgtgt-gcaaatatactcttgaatccctctggtgatttttaaatttttatcattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttctaattcctttatttctttg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 614830 672 + 1799296 TGTTTAAAAAAAAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCAAATTAAGAATGGTTTGGAAGTCTGTTTGTGAGCCATATGTTTGGGTTATCTTTATACTTAAAG-TGACTATAAATCTCAAAAGAGAACTGATGGGAGA-AATAACTATATCTACTAACATGGTAAGGGTATGTAAACATTTCTTAGTAATTGagaaaattgaaag-aaaagaa-aaaagagaaagggagagagagagaaacggagcaaaagggataatgaaggagagaaagaagaagagaaaggaagaggaagaaaagaaagaaggaggacgagggagagggaggaagaaagaaaggtg-aaaagaaag--aaTGGTAAAGTTTTTAACAACGTAATTTATCCTTTTAGaatatgaatgttgggctttttgatgatgtcccacagattccttagtctctgttcat-ttttttatgtgttattctttctgtttctc--agtcaatattttccattttcttatcttcaagctcatggcttcttc-tgtgtgt-gcaaatatactcttgaatccctttggtgatttttaaatttttatcattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttctaattcctttatttctttg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5173018 669 - 6934359 TGTTT-AAAAAAAT-CCTTAAAAGCATCAGAAAGTTAATACAGCAATGAAGAATTACAGG---ACCGAATTAAGAATGGTATGGAAGTCTGTTTGTGAGCCTTATGCTTGGGTTATCTCTATACTTAAAG-TGACTATGAATCTCAAAAGAGAACTGAAGGGAGA-AATAACCATATCTACCAACACAGTAAGGGTATTTAAACATCTCTTAGTAATTGagaaaattgaaag-aaaagaa-aaaagagaaagggagagacagagaaacagagcaaaagggataatgaaggagagaaagaagaagagaaaggaagaggaagaaaaataagaaggaggacgagggagagggagga----agaaaggtg-aaaacaaag--aATGGTAAAGTTTTTAACAACATAATTGATCCTTTTAGaatatgaatgttggtctttttgatgatgtcccacagattccttagtctctgttc-atttttttatgtattattctttctgtttctcagagtcaatattttccattttcttatcttcaagctcatgacttcttc-tgcctgt-gcaaatatactcttgaatccctctggtgatttttaaatttgtatcattgttgttttcagttctagaattactg-tatctctttcttgatattcttactttttcata--tttttctaattcctttatttctttg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20044424 660 + 128169293 TT-TTATAAAACAT-TCTT-AAAGCATCAGAATGTTAATAGAACAGTGAAGCAATGAAGAATTACAAGATTAAGAATGGTATGGACGTCTGTTTATGATTCTTATATTTGGGTTATCTCTTTACTCAGAGTTGAGTATCAATCTCAAAAGGGACCTGAAGACAGAGAAAAACCGTATCTACTAACACAGTAAAAGTATTTAAACATCTCTTAGATATTGAGAAAATTTAAAG-Taaagaaaaaaagagaaagggaaag--aaaaaaac--ag--agagggataatgagggagag---aaagaagagaaaggaagaggaagaaaattaaggaagaggag---ggagatagaggaagaaagaaagGTG-ATAAAAAAAAGAATGTTAAAGTTTTTAACAACAGAATTTATTGGTTTTGAATTTGAatgttggtctatttcttgatgtcccacagattccatagtctctgttc-a-ttttttatttgttattctttctgtttctcagagtcagtattttctattttcttatcttcaagctcatga---cttt-tctgtgtcacaaatagactcttgagtccctctggtgaattttttatttttggcattgtatttttcagctccagaatttctg-tatctctttgttgatattcttagttttccgtatttttttt-------tttttttttttg i calJac3.chr8 C 0 I 2840 s saiBol1.JH378145 17630083 656 + 18371965 TT-TTATAAAACAT-TCTT-AAAGCATCAGAAAGTTAACACAACAATGAAGCAATGAAGAATTACAAGATTAAGAATGGAATGGAAGCCTGTTTATGATTCTTACATTTGGATTATTTCTTTACTCAGAGTTGAGTATCAATCACAAAAAGGACCTAAAGAGAGA-AATAACCGTATCTACTAACACAGTAAAAGTATTTAAACATCTCTTAGTAATTGCGAAAACTgaaag-taaagaataaaagagaaagagaaag--aaaaaaacagag--agagggataatgaaggagag---aaagaagagaaaggaagaGGAAGAAAATTAAGAAGGAAGAGGA-GGGGATGGAGGAAGAAAGAAGGGTG-ATAACAATA--ACTGTTAAAGTTTTTAACAATAGAATTTTGCATTTTTGaatatgaatgttggtctgtttcctaatgtgccacagattcttcagtctctgttc-a--tttttatttgttattctttctgtttctc--ggtcaatattttcta-----ttatcttcaagctcatga---cttc-tgtgggttgcaaatagactcttgaatccctctggtgcattttttatttttgtcattgtagttttcagctccagaatttctg-tatctctttgttgatattcttactctttcatatttttttctga----ttcctttctttg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2164824 667 - 3566421 TT-CTATAAAACAT-TCTT-AAAGCATCAGAAAGTTAATACAACAATGAAGCAACAAAGAATTACAAGATTAAGAATGGTATGGAAGCCTGTTTATGATTCTTATATTTGGATTATCTCTTTACTCAGAGTTGAGTATCAATCACAAAAGGGACCTAAAGAGAGA-AATAACCATATCTACTA--ACAGTAAAAGTATTTAAACATCTCTTAGTAATTGAGAaaattgaaag-taaagaataaaagagaaagggaaag--aaaaaaacagag--agagggataatgaaggggag---aaagaagagaaaggaagaggaagaaaattaagaaggaagaggagggggatggaggaagaAAGAAAGGTG-ATAAAAAG---AATGTTAAAGTTTTTAACAATATAATTTTTCATTTTTGaatatgaatgttggtctatttcttgatgtgccacagattcctcagtctctgttc-a-ttttttatttgtttttctttctgtttttc--agtcgatatttcctattttcttatcttcaatctcattacttcttc-tgtgggtcgcaaatagactcttgaatccctctggtgcattttttagttttgtcattgtagttttcagctccaaaatttctg-tatctctttgttgatattcgtactctttcatatttttttctgattcctttatttctttg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7364460 665 + 9267652 TT-TTATAAAACAT-TCTT-AAAGCATCAGAAAGTTAATACAACAATGAAGCAATGAAGAATTACAAGATTAAGAATGATATGGAAGCCTGTTTATGATTCTTATATTTGGGTTGTCTCTTTACTCAGAGTTGAGTATCAATCTCAAAAGGGACCTGAAGAGAGA-AATAATCATATCTGCTAACACAGTAAAAGTATTTAAACATCTCTTAGCAATTGagaaaattgaaag-taaagaaaaaaagagaaagggaaag--aaaaaac---ag--agagggataatgaaggagag---aaagaagagaaaggaagaggaagaaaattaagaaggaagaggaggaagatggaggaagaaagaaagatg-ataaaaaag--aaTGTTAAAGTTTTTAACAATAGAATTTATTGTTTTTGaatatgaatgttggtctacttcttgatatcccacagattccttagtctctcttc-a-tattttatttgttattctttctgtttctcagagtcaatattttctattttcttatcttcaagctcatga---cttcttctgtgtcgcaaatagactcttgaatccctctggtgagctttttatttttgtcattgtagttttcagctccagaatttctg-tatctctttgttgatattcttagtcttccatattttttt--gattcctttatttctttg i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I a score=2104572.000000 s hg38.chr14_KI270725v1_random 98297 229 + 172810 tttatgttttccttgtgacatttgagtataattaagagagttgttttaaagtctttgtctagtaagtttgaagtctgggtttccttagagatattctctgtcaatttgttttgttcctttgaatgagccacactttcccattctttgtatgccttggaa-ctttttttgaaaactgggcattata------ataattataattactatgtggttactctgtaaatcagaccc-cccc-- s panTro5.chrY 334329 226 + 26350515 tttatgatttcctttttacatttgagtataattaagagagttgttttaaagtctttgtctagtaagtttaatgtctgggtttccttagagatattctctatcaatttgttttattccttttaatgagccatactttcccgttctttgtatgccttgtaa-ttttttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcaga----aacc-- i panTro5.chrY C 0 C 0 s panPan2.chr7 74644997 225 + 162613886 tttctgttttccttttgacatttgagtataattaagagagttgttttaaagtctttgtctagtaagtttgatgtctgggtttccttagagatattttctgtcaatttattttgttcctttgaatgagccatactttcccattctttgtatgccttgtaa-c--tttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcaga--c-cccc-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 7660 226 - 150013 tttatgttttccttttgacatttgagtataatgaagagagttgttttaaagtctttctctagtaagtttgaagtctgggtttccttagagatattttctgtcagtttgttttgttcctttgaatgagccatactttcccgttctttgtatgccttgtaa-ctttttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcaga----cccc-- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5669986 227 + 72422247 tttatgttttctttttgacatttgagtataattaagagagttgtttaaaagtcttcgtctagtaagtttgatgtctgggtttccttagagatattttctgtcaatttattttattcctttgaatgagccatactttcccattctttgtatgccttgtaa-ctttttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcaga--c-cccc-- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44108743 226 - 99891981 tttatgttttccttttgacatttgagtataattaagagagttgttttaaagtctttgtctagtaagtttgatgtctgggtttccttagagatattttctgtcaatttattttgttcctttgaatgagccatactttcccattcttggtatgcctcataa-c-ttttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcaga--c-cctc-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52340058 227 + 185818997 tttatgttttccttttgacatttgagtataattaagagagttgttataaagtctttgtctagtaagtttgatgtctgggtttccttatagatattttctgtcaatttattttgttcctttgaatgagccatactttccaattctttgtatgctttgtaa-ctttttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcagt--c-cccc-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124985755 227 - 192294377 tttatgttttccttttgacatttgagtataattaagagagttgttataaagtctttgtctagtaagtttgatgtctgggtttccttatagatattttctgtcaatttattttgttcctttgaatgagccatactttccaattctttgtatgccttgtaa-ctttttttgaaaactggacattata------ataattataattactatgtggttactctgtaaatcagt--c-cccc-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 333026 221 - 3123512 tttatgttttccttttgacatctgagtataattaagagagttgttataaagtctttgtctagtaagtttgatgtctgggtttccttatagatattttctgtcaatttattttgttcctttgaatgagccatactttccaattctttgtatgccttgtaa-ctttttttgaaaactggacattata------------ataattactatgtggttactctgtaaatcagt--c-cccc-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7566256 233 - 10077455 tttatgttttccttttgacatttgagtataattaagagagctgttataaagtctttgtctagtaagtttgatgtctgggtttccttagagatattttctgtcaatttattttgttcctttgaatgagccatactttccaattctttgtatgccttgtaa-ctttttttgaaaactggacattataattataataattataattactatgtggttactctgtaaatcaga--c-cacc-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121506404 232 - 127223203 tttatgttttccttttgacatttgagtataatta--agagttgttataaagtctttgtctagtaagtttgatatctgggtttccttagagatattttctgtcaatttattttgttcctttgaatgaggcatattttccaattctttgtatgccttgtaa-ctttttttgaaaactggacgttataattataataattataattactatgtggttactctgtaaatcaga--ctctcc-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 615502 233 + 1799296 tttatgttttccttttgacatttgagtataattaagagagctgttataaagtctttgtctagtaagtttgatgtctgggtttccttagagatattttctgtcaatttattttgttcctttgaatgagccatactttccaattctttgtatgccttgtaa-ctttttttgaaaactggacattataattataataattataattactatgtggttactctgtaaatcaga--c-cacc-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5173687 230 - 6934359 tttatgttttccttttgacatttgagtataattaagagagttgttagaaagtctttgtctagtaagtttgatgtctgggtttccttagatatattttctgtcaatttattttgttcctttgaatgagccatactttcccattctttgtatgccttgtaa-c-ttttttgaaaactggacattataattatagtaattataattactatgtggttactctgtaaatcaga--c---cc-- i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17630739 235 + 18371965 tttatgtttttctttagacatttgagtataataaagaaagtggtttcaaaacctttgcctagtcagtttgatgtctgggcttccttagagatattttatgtctatttattttattcctttgaatgacccatacttttccattctttgtatgccttgtga-ttttttttgaaagccgcacattataattgtaataattataattactatgtggttactctttaaagcaga--c-tcccct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2165491 236 - 3566421 tttatgtttttctttagacatttgagcataattaagaaagtggtttcaaaatctttacctagtaagtttgatgtctgggcttccttagagatattttatgtctatttattttattcctttgaatgacccatacttttccattctttgtatgtcttgtgatttttttttgaaagctgtatgttataattataataattataattactatgtggttactctttaaagcaga--c-ccccct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7365125 235 + 9267652 tttatgtttttctttagacatttgagtataattaagaaagtggtttcaaaatctttgcctagtaagtttcatatctgggcttctttagagacattttaagtctatttattttattcctttgaatgacccatacttttccattctttgtatgccttgtga-ttttttttgaaagctgcacattataattataagaattataattgctgtgtgattactctttaaagcaga--c-ccctcc i aotNan1.NW_018514471v1 C 0 I 18 e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I a score=87704.000000 s hg38.chr14_KI270725v1_random 98526 13 + 172810 ccccacaaacaca---- s panTro5.chrY 334555 13 + 26350515 ccctacaaacaca---- i panTro5.chrY C 0 C 0 s panPan2.chr7 74645222 13 + 162613886 ccttacaaacaca---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 7886 13 - 150013 ccccacaaacaca---- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5670213 13 + 72422247 ccccacaaacaca---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44108969 13 - 99891981 ccctacaaacaca---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52340285 13 + 185818997 cccaacaaacata---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124985982 13 - 192294377 cccaacaaacata---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 333247 13 - 3123512 cccaacaaacata---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7566489 13 - 10077455 ccccacaaacaca---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121506636 13 - 127223203 ccctacaaacaca---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 615735 13 + 1799296 ccccacaaacaca---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5173917 13 - 6934359 ccccacaaacaca---- i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17630974 13 + 18371965 ----acaaacacacaca i saiBol1.JH378145 C 0 I 4 s cebCap1.NW_016107540v1 2165727 13 - 3566421 ----acaaacacacaca i cebCap1.NW_016107540v1 C 0 I 4 e canFam3.chr18 4070834 4772 + 55844845 I e aotNan1.NW_018514471v1 7365360 18 + 9267652 I e calJac3.chr8 20045084 2840 + 128169293 I a score=1449620.000000 s hg38.chr14_KI270725v1_random 98539 174 + 172810 gtaatgttttggggttttaagttttctttacttattatattgttaaggat-t----ttttttttactgaaattttccaaagtga-tttacaaaactgtttgctttataaggtgtggtcaccgaagtctttttgtttccttgacaaatgttaagctaatgttttgacagtgattttcttgt s panTro5.chrY 334568 173 + 26350515 gtaatgttttgtggttttaaattttctttacttactatatggttaagga--t----ttttttttagtgaaattttccaaagtga-tttacaaaactgtttgctttataaggtgtggtcatcgaagtctttttgtttccttaataaatgttaagctaatgttttgacagtgattttcttgt i panTro5.chrY C 0 C 0 s panPan2.chr7 74645235 172 + 162613886 ctaatgttttgtggttttaagttttatttacttat--tattgttaaggtt-t----taatttttagtgaaattttccaaagtga-tttacaaaactgtttgctttataaggtgtggtcactggagtctttttgtttccttaacaaatgttaagctaatgttttgacagtgattttattgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 7899 174 - 150013 ctaatgttttgtggttttaaattttatttacttattatattctcaaggtt-t----ttatttttagtgaaattttccaaagtga-tgtacaaaactgtttgctttataaggtgtggtcaccgaagtcttttcgtttccttaacaaatgttaagctaatgttttgacagtgattttcttgt i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5670226 169 + 72422247 ctaatgttttgtggttctaaattttatttact-----tattgttaaggtt-t----ttatttttagtgaaattttgcaaattga-tttacaaaactgtttgctttataaggtgtggtcaccgaaatctttttgtttccttaacaaatgttaagctaatgttttgacagtgattttcttgt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44108982 174 - 99891981 ctaatgttttgtggttttaaattttatttacttattatattgttaaggt--t----ttttttttagtgaaattttccaaagtgattttacaaaactgtttgctttataaggtgtggtcactgaagtctttttgtttccttaacaaatgttaagctaatattttgacagtgattttcttgt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52340298 174 + 185818997 ctgatg-ttttttattttaatttttatttacttattatattgttaaggttag----ttttttttagtgaaattttccaaagtgattttacaaaactgcttgctctataaggtgtgatcactgaagtcattttgtttccttaactaatgttaagctatta-tttgacagtgattttctact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124985995 174 - 192294377 ctgatg-ttttttattttaatttttatttacttattatattgttaaggttag----ttttttttagtgaaattttccaaagtgattttacaaaactgcttgctctataaggtgtgatcactgaagtcattttgtttccttaactaatgttaagctatta-tttgacagtgatttTCTACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 333260 175 - 3123512 ctaatgtttttttattttaatttttatttacttattatattgttaaggttag----ttttttttagtgaaattttccaaagtgattttacaaaactgcttgctctataaggtgtgatcactgaagtcattttgtttccttaactaatgttaagctatta-tttgacagtgattttctact i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7566502 175 - 10077455 ctaatgtttttttattttaaattttatttacttattatattgttaaggttag----ttttttttagtgaaattttccaaagtgattttacaaaactgtttgctctataaggtgtgatcactgaagtctttttgtttccttaactaatgttaagctatta-tttgacagtgattttcttct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121506649 174 - 127223203 ctaacgtttcttgatttaaaattttatttacttattatattgttaaggttag-----tttttttagtgaaattttccaaagtgattttacaaaactgtttgctttataaggtgtgatcactgaagtctttttgtttccttaactaatgttaagctaaaa-tttgacagtgattttcttgt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 615748 175 + 1799296 ctaatgtttttttattttaaattttatttacttattatattgttaaggttag----ttttttttagtgaaattttccaaagtgattttacaaaactgtttgctctataaggtgtgatcactgaagtctttttgtttccttaactaatgttaagctatta-tttgacagtgattttcttct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5173930 174 - 6934359 ctaacattttttgattttaaattttatttacttaatatattgttaaggttaa-----tttatttagtgaaattttccaaagtgattttacaaaactgtttgctctataaggtgtgatcactgaagtctttttgtttctttaactaatgttaagctatta-tttgacagtgattttcttct i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17630991 176 + 18371965 ctaacattttgtgattttaaattccatttacttattgtatttttaaggtgga----ttttttttactgaagttttccaagctgattctacaaaactgtttactttataaggtgtgttcactgaagtctttttgtttccttgactaatgttaaactaatgttttgacagtgatttctttgt i saiBol1.JH378145 I 4 C 0 s cebCap1.NW_016107540v1 2165744 180 - 3566421 ctaacattttgtggttttaaattctatttacttgttatatttttaaggttaattttttttttttagtgaagttttccaagctgattatacaaaactgtttactttatagggtgtgttcactgaaatctttttgtttccttaactaatgttaagctaatgttttgacagtgatttctttgt i cebCap1.NW_016107540v1 I 4 I 34 s aotNan1.NW_018514471v1 7365378 179 + 9267652 ataacattttgtggttttaaattctatttacttattatatttttggggttaa-tttttttttttagtcaagttttccaagctgattctacaaaactgtttactttataggatgtgttcaccaaggtctttttgtttccttaactaatgttaagctaatgttttgacagcgatttctttgt i aotNan1.NW_018514471v1 I 18 I 28 e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I a score=212494.000000 s hg38.chr14_KI270725v1_random 98713 35 + 172810 atgtcaggaactaagcaa--acaggcaaatacaacaa s panTro5.chrY 334741 35 + 26350515 atgtcaggaactaagcaa--acagggaaatacaacaa i panTro5.chrY C 0 C 0 s panPan2.chr7 74645407 35 + 162613886 ttgtcaggaactaagcaa--acaggcaaatacaacaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8073 35 - 150013 atgtcaggaattaagcaa--acaggcaaatacaacaa i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5670395 35 + 72422247 atgtcaggaactaagcaa--acaggcaaatacaacaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44109156 37 - 99891981 atgccaggaactaagcaaacacaagcaaacacaacaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52340472 37 + 185818997 atatcaggaactaagcaaacacaggtaaacacagcaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124986169 37 - 192294377 ATATCAGGAACTAAGCAAACACAGGTAAACACAGCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 333435 37 - 3123512 atatcaggaactaagtaaacacaggtaaacacagcaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7566677 37 - 10077455 atatcaggaactaagcaaacacaggtaaacacagcaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121506823 37 - 127223203 atattaggaactaagcaaacacagacaaacacagcaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 615923 37 + 1799296 atatcaggaactaagcaaacacaggtaaacacagcaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5174104 37 - 6934359 gtatcaggaactaagcaaacacaggcaaacacagcaa i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17631167 18 + 18371965 -------------------cactgtcaaatacaacaa i saiBol1.JH378145 C 0 I 3 e canFam3.chr18 4070834 4772 + 55844845 I e aotNan1.NW_018514471v1 7365557 28 + 9267652 I e cebCap1.NW_016107540v1 2165924 34 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I a score=84132.000000 s hg38.chr14_KI270725v1_random 98748 12 + 172810 aaacgaaaagaa s panTro5.chrY 334776 12 + 26350515 aaacaaacaaaa i panTro5.chrY C 0 C 0 s panPan2.chr7 74645442 8 + 162613886 a----aaaagaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8108 10 - 150013 aaac--aaagaa i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5670430 12 + 72422247 aaacaaaaagaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44109193 12 - 99891981 aaacaaaaagaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52340509 12 + 185818997 aaacaaaaagaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124986206 12 - 192294377 AAACAAAAAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 333472 12 - 3123512 aaacaaaaagaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7566714 12 - 10077455 aaacaaaaagaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121506860 12 - 127223203 aaacaaaaagaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 615960 12 + 1799296 aaacaaaaagaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5174141 12 - 6934359 aaacaaaaagaa i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17631188 12 + 18371965 aaacacaaagaa i saiBol1.JH378145 I 3 I 1 s aotNan1.NW_018514471v1 7365585 12 + 9267652 aaacacaaagaa i aotNan1.NW_018514471v1 I 28 I 1 e canFam3.chr18 4070834 4772 + 55844845 I e cebCap1.NW_016107540v1 2165924 34 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I a score=4563431.000000 s hg38.chr14_KI270725v1_random 98760 494 + 172810 aaacaagtaatcattatccagcaaaatatgtctctaggccatgcagactggcttcgtgctgggttctttaaagccgaaacaaagtgtgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagagcttgcactgaggagagggatccgccaaggtaaaagtgtagggtcttcttatgacatttgtcagcatgtggcttaacctatgcatacatgtgactttctagactctcttgtgtacgtgaatgattttgaatgtcttagttttccaaatactcttctccaacttttcttcctgtgctgaaggtgatctactatatgtgtaagctctaatttttgccctaagcatctgtggtttgttaggtctccttgcagagtttcttgataatgtccattccttatctgttctgtattctagcaacacag--aaaaa--acaaaagcctttcatgagtcctttaggtatcccccacaccagtcagaacagacac-- s panTro5.chrY 334788 492 + 26350515 aaacaagtagtcattacccagcaaaatatatctctaggccatgcagactggctttgtcctcggttctttaaagccaccacaaagtatgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagagcttgcactgaggggaggtatcagccaaggtaaaagtgtagggtcttcttatgacatttgtcagcatgtggcttaacctatgcatatatgtgactttctagactctcccatgtaagtgaatgattttgaatgtcttagttttccaaatactcttctccaacttttcttcctgtgctgaaggtgatctactatatgtgtaaactctaatttatgccctaagcatctgtggtttgttaggtctcctttcagagtttcttaaaaatgtcgattccttatgtattctttattctagcaacacag--aaaaa----aacagcctttcatgagtcctttagatatcccccagacctgtctgaacagacaC-- i panTro5.chrY C 0 N 0 s panPan2.chr7 74645450 491 + 162613886 aaacaaggaataattatccagcaaaatatgtctctaggccatgcagactggctttgtgctgggttctttaatgccggcacaaagtgtgtgtttactcttgcactgagtgaagttcaagttcacacttgcacagagcttgcactgaggggagggatcagccaaggtaaaagtgtagggtcttcttatgacatttgtcagcatgtggctaaacctatgcatacacgtgactttctagactctcccatgtacgtgaatgattttgaatgtcttagttttccaaatactcttctccaacttttcttgctgtgctgaaggtgatctactatatgtgtaaactttaatttttgccctaagcatctgtggtttgttaggtctccttgcagagtttcttaataatgtccattccttatctcttctgtattctagcaacacag--aaaa-----aaaaacctttcattagtcctttaggtatcccccagaccagtcagaacagacac-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8118 496 - 150013 aaacaagtaatcattatccagcaaaatatgtctctaggccatgcagactggctttgtgctgggttctttaaagccggcacaaagtgtgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagagcttgcactgaggggagggatcggccaaggtaaaagtgtagggtcttcttatgacatttgtcagcatgtggcttaacctatgcatacatgtgactttctagactctcccatgtacgtgaatgattttgaatgtcttagttttccaaatactcttctccaacttttcttcctgtgctgagggtgatctactatatgtgtaaactctaatttttgccctaagcatccgtggtttgttaggtctccttgcagagtttcttgataatgtccattccttatctgttctgtattctagcaacacag--aaaaaaaaaaaaagcctttcatgagtcctttaggtatcccccagaccagtcagaacagacac-- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5670442 489 + 72422247 aaacaagtaatcattatccaggaaaatatatctctaggccatgcagactggctttgtgctgggttctttgaagccggcacaaagtgtgtgttcactcttgcactgagtgaagttcgagttcactcttgcacagagcttgcactgaggggaggggtcagccaaggtaaaagtgtggggacttcttatgacatttgtcagcatggggcttaacctatgcatacatgtgactttctagactctcccatgtacgtgaatgattttgaatgtcttagttttccaaatactctt---caacttttcttcctgtgctgaagaggatctactatatgtgtaaactctaatttttgccctaggcatctgtggtttgttaggtctccttgcagagtttcttaataatatccattccttatctgttctgtattctagcaacacag--aaaaa----aaaagcctttcattagtccttcaggtatcccccagaccagtcagaacagacac-- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44109205 487 - 99891981 aaacaagtaatcattatccagcaaaatatgtctctaggccatgcagactggctttgcgctgggttctttgaagctggcacaaggtgtgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagagcttgcactgaggggcgggatcagccaaggtaaaa-tgtagggtcttcttatgacatttgtcagcatgtggcttaacctatgcatacatgtgactttctagactctcccatgtacatgaataattttgaatgtcttagttttccaaatactcttctccaacttttcttcctgtgctgaaggtgatctactatatgtgcaaactctaatttttgccctaagcatctgtagtttgttaggtctcctt---gagtttcttaataatgtccattccttatctgatctgtattctagcaacacag--caaa-----aaaagcctttcatttgtcctttaggtatctcccagaccagtcagaacagacat-- i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 52340521 491 + 185818997 aaacaagtaatcattagccagcaaaatatgtgtctaggccacacagactggctttgtgctgggccctttgaagctggcagaaagtgtgtgttcgctcttgcactgagtgaagttcaagttcactcttgcacagaacttgcactgagggtagggatcagccaaggtaaaagtgtagagtcttcttatgacatttgtcagcttgtggcttaacctatgcatacatgtgactttctaggctctcccatgtacgtgaatgattttgaatgtcttaattttccaaatactcctctccaacttttcttcccgtgctgaaggtgatctattatatgtgtaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtctcttcattatgtccattccttatctgttctgcattctagcaacacag--aaaa-----aaatgcctttcattagtcttttaggtatctcccagaccagtcagaacagacat-- i rheMac8.chr3 C 0 I 2 s macFas5.chr3 124986218 491 - 192294377 AAACAAGTAATCATTAGCCAGCAAAATATGTGTCTAGGCCACACAGACTGGCTTTGTGCTGGGCCCTTTGAAGCTGGCAGAAAGTGTGTGTTCGCTCTTGCACTGAGTGAAGTTCAAGTTCACTCTTGCACAGAActtgcactgagggtagggatcagccaaggtaaaagtgtagagtcttcttatgacatttgtcagcttgtggcttaacctatgcatacatgtgactttctaggctctcccatgtacgtgaatgattttgaatgtcttaattttccaaatactcctctccaacttttcttcccgtgctgaaggtgatctattatatgtgtaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtctcttcattatgtccattccttatctgttctgcattctagcaacacag--aaaa-----aaatgcctttcattagtcttttaggtatctcccagaccagtcagaacagacat-- i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 333484 491 - 3123512 aaacaagtaatcattagccagcaaaatatgtgtctaggccacgcagactggctttgtgctgggccctttgaagctggcagaaagtgtgtgttcgctcttgcactgagtgaagttcaagttcactcttgcacagaacttgcactgagggtagggatcagccaaggtaaaagtgtagagtcttcttatgacatttgtcagctggtggcttaacctatgcatacatgtgactttctaggctctcccatgtacgtgaatgattttgaatgtcttaattttccaaatactcctctccaacttttcttcccgtgctgaaggtgatctattatatgtgtaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtctcttcattatgtccattccttatctgttctgcattctagcaacacag--aaaa-----aaatgcctttcattagtcttttaggtatctcccagaccagtcagaacagacat-- i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 7566726 491 - 10077455 aaacaagtaatcattagccagcaaaatatgtgtctaggccacgcagactggctttgtgctgggccctttgaagctggcagaaagtgtgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagaacttgcactgagggtagggatcagccaaggtaaaagtgtagggtcttcttatgacatttgtcagcttgtggcttaacctatgcatacatgtgactttctaggctctcccatgtacgtgaatgattttgaatgtcttaattttccaaatactcctctccaacttttcttcccatgctgaaggtgatctactatatgtgtaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtctcttcattatgtccattccttatctgttctgcattctagcaacacag--aaaa-----aaatgcctttcattagtcttttaggtatctcccagaccagtcagaacagacat-- i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 121506872 491 - 127223203 aaacaAGTAATCATTAGCCAGCAAAGTATGTGTCTAGGCCACACAGACTGGCTTTGTGCTGGGCCCTTTGAAGCTGGCGAAAAGTGTGTGTTCACTCTTGCACTGAGTGAAGTTCAAGTTCACTCTTGCACAGAgcttgcactgagggtagggatcagccaaggtaaaagtgtagggtcttcttacgacatttgtcagcttgtggcttaacctatgcatacatgtgactttctagactctcccatgtacgtgaatgattttgaatgtcttaattttgcaaatactcctctccaacttttcttcccgtgctgcaggtgatctactgtatgcgtaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtctcttcattatgtccattccttatctgttctgcattctagcaacacag--aaaa-----aaatgcctttcgttagtcttttaggtatctcccagaccagtcagaacagacat-- i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 615972 491 + 1799296 aaacaagtaatcattagccagcaaaatatgtgtctaggccacgcagactggctttgtgctgggccctttgaagctggtagaaagtgtgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagaacttgcactgagggtagggatcagccaaggtaaaagtgtagggtcttcttatgacatttgtcagcttgtggcttaacctatgcatacatgtgactttctaggctctcccatgtacgtgaatgattttgaatgtcttaattttccaaatactcctctccaacttttcttcccatgctgaaggtgatctactgtatgtgtaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtctcttcattatgtccattccttatctgttctacattctagcaacacag--aaaa-----aaatgcctttcattagtcttttaggtatctcccagaccagtcagaacagacat-- i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 5174153 493 - 6934359 aaacaagtaatcattagccagcaaaatatgtgtctaagccacgcagactggctttgtgctgggctctctgaagctggcagaaagcgtgtgttcactcttgcactgagtgaagttcaagttcactcttgcacagagcttgcactgagggtagggatcagccaaggtaaaagtgtagggtcttctaacgacgtttgtcagcatgtggcttaacctatgcatacatgtgactttctagactctcccatttacgggaatgattttaaatgtcttaattttccaaatattcctctccaacttttcttcccatgctgaaggtgatctactatatgtggaaactctaatttttgccctaaggatctgtagtttgttaggtctctttgcagagtttcttcattatgtccattccttatctgttctgcattctagcaacacagaaaaaa-----aaatgcttctcattagtcttttaggtatctcccagaccagtcagaagagacat-- i colAng1.NW_012115910v1 C 0 I 2 s saiBol1.JH378145 17631201 473 + 18371965 aaacaagtaaacattatccagaaaaatatatctctaggccaggtagactggctttgtgcagggctgtctgaacctggcacagcatgtgtgttcactctt--------tgaa------------tattatgctgaacttgcactgagggtaggaatcagccaagataaaagtgtagggtccttttaggacatttgtcagctcgtggcttaacctgtgcatacatgtgaatttctaaactctcctatgcacgtgaatgattttgagtgtcttaattttccaaatactcttctccaacttttcttcctgtgctgaagttgatctactgcatgtgtaaactctaatttttcccctaagaatctgtaatttgttggatctccttgcacagtttctgaaaaatgtccatttcttatctattttgaattctagcagcacag--ataa-----aattgcctctcattagtcctttaggtatcccccagaccagttggaacaaacatat i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2165958 473 - 3566421 aaacaagtaaacattatccagcaaaatatatctctaggccaggcagactggctttgtgctgggctgtctgaacctggcacagtgtgtgtgttcactctt--------tgaa------------tattatgctgagcttgcactgaagataggaatcagccaagataaaagtgtagggtcctcttaggacatttgtcagcttgtggcttaacctatgcatatgtgtgactttctaaactctcccatgcacatgaatgattttgaatgtcttaattttccaaatactattcttcaacttttctttctgtgctgaagttgatctactgtatgtgtaaactctaatttttcccctaagaatctgtaatttgttggatctccttgcacagtttctgaataatgtccattccttatctattttgaattctagcaacacag--agaa-----aattgcctttcgttagtgctttatgtatcccccagaccagttagaacaaacatat i cebCap1.NW_016107540v1 I 34 C 0 s aotNan1.NW_018514471v1 7365598 473 + 9267652 aaacaagtaaacattatccagcaaaatatatctctacgccaggcagactggctttgtgctgggctgtctgaacctggcacagtgtgtgtcttcactctt--------tgaa------------tattatgctgagcttgcactgagggtaggaatcagccaagataaaagtgtagggtcctcttaggacatttgtcagcttgtggcttaacctatgcatacatgtgaatttctaaactctcctatgcacatgaatgattttgaatgtcttaattttccaaatactcttctccaacttttcttcctgtgctgaagatgatctactgtatgtgtaaactctagttttttccctaagaatctgtaatttgttggctctccttgcatagtctctgaataatgtccattccttatctattttgaattctagcaacacag--ataa-----aattgcctttcattagtgctttaggtatcccccagaccagttagaacaaacatat i aotNan1.NW_018514471v1 I 1 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I a score=2740386.000000 s hg38.chr14_KI270725v1_random 99254 281 + 172810 atagtaatttgcgggtaagatcttctcttgttcctttgga-tcatgg-accagggttcctcactgggaacgtgggcttctgacacttcaaaactgccaatttgctgctgcaaaggcaagttaaaaatgtcataaagttttcaagttgtctttttcttgagtctgctttcacttggttgctgtaatcttttgaccattttccagagttttggcaaagtttattcggacagtttctcttag--ttgtgtgatgtttctgtggggaaatgaaagattgcagctgtctc s panTro5.chr7 52586766 280 + 166211670 ataataatttgcgggtaagagcttctcttgttcctttggagccatgg-accagggttccacactgggaacatgggcttctaacacttcaaaactgcc--tttgctggggcaaaggcaagttaaaaatgtcataaagttttctagttgtctttttattgagtctgctttcacttggttgttgtaatcttttgaccattttccagagttttggcaaagtttactctgagaatttctcttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i panTro5.chr7 N 0 C 0 s panPan2.chr7 74645941 280 + 162613886 ataataatttgtgggtaagatcttctcttgttcctttgaa-ccatgg-accagggttcctcactgggaacgtgggcttctgacacttcaaaactgccaatttg-tggggcaaaggcaagttaaaaatgtcataaagttttcaagttgtctttttcttgagtgtgctttcacttggttgttgtaatcttttgaccattttccagagttttggcaaagtttattcggacagtttctcttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8614 281 - 150013 ataataatttgcgggtaagatcttctcttgttcctttgga-ccacgg-accagggttcctcactgggaacatgggcttctgacacttcaaaactgccaatttgctggggcaaagccaagttaaaaatgtcataaagttttccagttgtctttttcttgagtctgctttcactcggttgttgtaatcttttgaccattttccagagttttggcaaagtttattcggacagtttctcttag--ttgtgtgatgtttctgtggggaaatgaaagattgcagctgtctc i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5670931 281 + 72422247 ataataatttgcgggtaagatcttcgcttgttcctttgga-ccatgg-accagggttcctcactgggaacgtgggcttctgacacttcaaaactgccaatttgctggggcaaaggcaagttaaaaatgtcataaagttttcaagttgtctttttcttgagtctgctttcacttggttgttgtaatcttttgaccgttttccagagttttggcaaagtttattcggacagtttctcttag--ttgtgtgatgtttctgtggggaaatgaaagattgcagctgtctc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44109694 281 - 99891981 ataataatttgcgggtaagatcttctcttgttcctttggagccatgg-accagtgttccacactgggaacatgggcttctaacacttcaaaactgccagtttgctggggcaaaggcaagttaaaaatatcataaagttttcaagttgtctttttcttgagtctgctttcacttggttgttgtaatcttttgaccattttccagagttttggcaaagtttattctgacagtttctcttag--ttgtgtgatgtttctgtggggaaatgaaagattgca-ctgtctc i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 52341014 282 + 185818997 ataataatttgcaggtaagatcttctcctgttcctttggagccatgg-accagtgttccacactgggaacgtgggcttctgacacttcaaaactgccaatttggtggggcacaggcaagttaaaaatgtcataaagttttaaagttgtcttttacttgagtctactttcacttggttgttgtaatcttttcaccattttccagagttttggtaaagttcattctggcagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgtagctgtctc i rheMac8.chr3 I 2 C 0 s macFas5.chr3 124986711 282 - 192294377 ataataatttgcaggtaagatcttctcctgttcctttggagccatgg-accagtgttccacactgggaacgtgggcttctgacacttcaaaactgccaatttggtggggcacaggcaaattaaaaatgtcataaagttttaaagttgtcttttacttgagtctactttcacttggttgttgtaatcttttcaccattttccagagttttggtaaagttcattctggcagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 333977 282 - 3123512 ataataatttgcaggtaagatcttctcctgttcctttggagccatgg-accagtgttccacactgggaacgtgggcttctgacacttcaaaactgccaatttggtggggcacaggcaagttaaaaatgtcataaagttttcaagttgtcttttacttgagtctactttcacttggttgttgtaatcttttcaccattttccagagttttggtaaagttcattctggcagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 7567219 282 - 10077455 ataataatttgcaggtaagatcttctcctgttcctttggagccatgg-accagtgttccacactgggaacgtgggcttctgacacttcaaaactgccaatttggtggggcacaggcaagttaaaaatgtcataaagttttcaagttgtcttttacttgagtctactttcacttggttgttgtcatcttttcaccattttccagagttttggtaaagttcattctgacagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 121507365 282 - 127223203 ataataatttgcaggtaagatcttctcctgttcctttggagccatgg-accagtgttccacactgggaacgtgggcttctgacacttcaaaactgccaatttgctggggcacaggcaagttaaaaatgtcataaagttttcaagttgtcttttacttgagtctactttcacttggttgttgtaatcttttcaccattttccagagttttggtaaagttcattctggtagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 616465 282 + 1799296 ataataatttgcaggtaagatcttcccctgttcctttggagccatgg-accagtgttccacactgggaacgtgggcttctgacacttcaaaactgccaatttggtggggcacaggcaagttaaaaatgtcataaagttttcaagttgtcttttacttgagtctactttcacttgattgttgtaatcttttcaccattttccagagttttggtaaagttcattctgacagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtttc i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 5174648 281 - 6934359 ataataatttgcgggtaagatcttctcttgttcctctggagccatgg-accagggttccacactgggaacgtgggcttctgacacttcaaaactgccaatttgctggggcacaggcaagttaaaaatgtcataaagttttcaagttgtc-tttacttgagtctactttcacttggttgttgtaatcttttcaccattttccagagttttggtaaagtttattctggcagtttcttttag--ttgtttgatgtttctgtggggaaatgaaagattgcagctgtctc i colAng1.NW_012115910v1 I 2 C 0 s saiBol1.JH378145 17631674 282 + 18371965 ataatcattttccagtaagatcgtctcttattccattggaaccatgg-accagggttccacatggggaatgtaggcttctgacccttcaaaactgccacttcagcgaggcataggcaagttaaaaatgtcataaagttttcaagttgtctttttcttgagtctgctttcacttggttgttgtaatattttcactattttccagagttttgacaaagtttattctgacagtttcttttag--ttttttgatgtttctgtggtgaaatgaaagattgaagctgtctc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166431 285 - 3566421 ataatcattttccagtaagatcttctcttattccattggaaccatggaaccagggttccacatggggaatgtaggcttctgacacttcaaaactaccacttcagtgaggcataggcaagttaaaaatgtcatgaagttttcaagttgtctttttcttgagtcttatttcacttggttgttgtaatattttcactattttccagagttttgacaaagtttattctgacagtttcttttagttttttttgatgtttctgtggggaaatgaaagattgcagctgtctc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366071 282 + 9267652 ataatcattttccagtaagatcgtctcttattccattggaaccacgg-accagggttccacatggggaacgtaggcttctgacacttcaaaactgccacttcagtgaggcataggcaagttaaaaatgtcataaagttttcaagttgtctttttcttgagtctgctttcacttggttgttgtaatattttcactattttccagagtcttgacgaagtttattctgacggtttcttttag--ttttttgatgtttctgtggggaaatgaaagattgcagctgtctt i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I a score=74739.000000 s hg38.chr14_KI270725v1_random 99535 7 + 172810 cactgct s panTro5.chr7 52587046 7 + 166211670 cattgcc i panTro5.chr7 C 0 C 0 s panPan2.chr7 74646221 7 + 162613886 cactgcc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8895 7 - 150013 cactgct i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr22 32855837 7 - 46535552 cactgcc i ponAbe2.chr22 n 0 C 0 s nomLeu3.chr17 44109975 7 - 99891981 cactgct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341296 7 + 185818997 cactgcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124986993 7 - 192294377 cactgcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 334259 7 - 3123512 cactgcc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7567501 7 - 10077455 cactgcc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121507647 7 - 127223203 cactgcc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 616747 7 + 1799296 cactgcc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5174929 7 - 6934359 cactgcc i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17631956 7 + 18371965 cactgcc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166716 7 - 3566421 cactgcc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366353 7 + 9267652 cactgcc i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I a score=7847.000000 s hg38.chr14_KI270725v1_random 99542 1 + 172810 g s panTro5.chr7 52587053 1 + 166211670 a i panTro5.chr7 C 0 C 0 s panPan2.chr7 74646228 1 + 162613886 a i panPan2.chr7 C 0 C 0 s ponAbe2.chr22 32855844 1 - 46535552 a i ponAbe2.chr22 C 0 C 0 s nomLeu3.chr17 44109982 1 - 99891981 a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341303 1 + 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124987000 1 - 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 334266 1 - 3123512 a i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7567508 1 - 10077455 a i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121507654 1 - 127223203 a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 616754 1 + 1799296 a i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5174936 1 - 6934359 a i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17631963 1 + 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166723 1 - 3566421 a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366360 1 + 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I a score=189239.000000 s hg38.chr14_KI270725v1_random 99543 31 + 172810 ttttgctgatGCTCCTCTTTTGTCAATTTTT s panPan2.chr7 74646229 31 + 162613886 ttttgctgatGCTCCTCTTTTGTCAATTTTT i panPan2.chr7 C 0 C 0 s ponAbe2.chr22 32855845 30 - 46535552 ttttgctgatGCTCCTC-TTTGTCAATTTTT i ponAbe2.chr22 C 0 n 0 s nomLeu3.chr17 44109983 31 - 99891981 ttttgctgatGCTCCTCttttgtcaattttt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341304 31 + 185818997 ttttgctgatGCTCCTCttttgtcatttttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124987001 31 - 192294377 ttttgctgatGCTCCTCttttgtcatttttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 334267 31 - 3123512 ttttgctgatGCTCCTCttttgtcatttttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7567509 31 - 10077455 ttttgctgatGCTCCTCttttgtcatttttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121507655 31 - 127223203 ttttgctgatGCTCCTCttttgtcatttttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 616755 31 + 1799296 ttttgctgatGCTCCTCttttgtcatttttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5174937 31 - 6934359 ttttgctgatGCTCCTCtttcgtcatttttt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17631964 26 + 18371965 ttttGATGACGGt-----tctgtcaatgttt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166724 26 - 3566421 ttttgctgatGGt-----tctgtcaattttt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366361 26 + 9267652 ttttgctgatGGT-----TCTGTGAACTTTT i aotNan1.NW_018514471v1 C 0 C 0 e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I e panTro5.chr7 52587054 0 + 166211670 C a score=89184.000000 s hg38.chr14_KI270725v1_random 99574 14 + 172810 TCTTCATGTTATTA s panPan2.chr7 74646260 14 + 162613886 GCTTCATGTTATTA i panPan2.chr7 C 0 C 0 s nomLeu3.chr17 44110014 14 - 99891981 gcttcatgttattg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341335 14 + 185818997 gcttcatgttatta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124987032 14 - 192294377 gcttcgtgttatta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 334298 14 - 3123512 gcttcatgttatta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7567540 14 - 10077455 gcttcatgttatta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121507686 14 - 127223203 gcttcatgttatta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 616786 14 + 1799296 gcttcatgttatta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5174968 14 - 6934359 gcttcgtgttatta i colAng1.NW_012115910v1 C 0 I 1596 s saiBol1.JH378145 17631990 14 + 18371965 gcttcattttatta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166750 14 - 3566421 tcttcatgttatta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366387 14 + 9267652 GTTTCATGTTATTA i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chr22 32855875 0 - 46535552 I e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I e panTro5.chr7 52587054 0 + 166211670 C a score=392940.000000 s hg38.chr14_KI270725v1_random 99588 76 + 172810 TGCTTTGTTATTAGTTCAtgtattagttttctagggctcccataaccaactaacacaaactgggtgccttgaacaa s panPan2.chr7 74646274 76 + 162613886 TGCTTTGTTATTAGTTCAtgtattagttttctaggtctgccataaccaagtaacacaaactgggtgccttgaacaa i panPan2.chr7 C 0 C 0 s nomLeu3.chr17 44110028 76 - 99891981 tgcttttttattagttcatttattaattttctagggctgctgtaaccaagtaacacaaactgagtgccttgaacaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341349 75 + 185818997 tactctgttattatttcatgtattagctttctagggctgcctcaaccaagt-acacaaactgggtgccttgaacaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124987046 75 - 192294377 tactctgttattagttcatgtattagctttctagggctgcctcaaccaagt-acacaaactgggtgccttgaacaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 334312 75 - 3123512 tactctgttattagttcatgtattagctttctagggctgcctcaaccaagt-acacaaactgggtgccttgaacaa i macNem1.NW_012011522v1 C 0 I 1723 s cerAty1.NW_012000909v1 7567554 75 - 10077455 tactctgttattagttcatgtattagctttctagggctgcctcaaccaagt-acacaaactgagtgccttgaacaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121507700 75 - 127223203 tattctgttattagttcatgtattagctttctagggctgccttaaccaagt-acacaaactgggtgccttgaataa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 616800 75 + 1799296 tactctgttattagttcatgtattagctttctagggctgcctcaaccaagt-acacaaactgggtgccttgaacaa i manLeu1.NW_012105809v1 C 0 C 0 s saiBol1.JH378145 17632004 76 + 18371965 tactctgttattagttaatgtattagttttctagggctgccataaccaaacaacacaaactgggtgccttgaacaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166764 76 - 3566421 tactctgttgttagttcatgtattagttttctagggctgccataaccaagcaacacaaactgagtgcctagaacaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366401 76 + 9267652 TACTCTGTTATTAGTTCAtgtgttagttttctagggctgccataaccaagcaacacaaactgggtgccttaaacaa i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chr22 32855875 0 - 46535552 I e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e panTro5.chr7 52587054 0 + 166211670 C a score=5500.000000 s hg38.chr14_KI270725v1_random 99664 1 + 172810 c s panPan2.chr7 74646350 1 + 162613886 c i panPan2.chr7 C 0 C 0 s nomLeu3.chr17 44110104 1 - 99891981 c i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341424 1 + 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124987121 1 - 192294377 c i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7567629 1 - 10077455 c i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121507775 1 - 127223203 c i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 616875 1 + 1799296 c i manLeu1.NW_012105809v1 C 0 C 0 s saiBol1.JH378145 17632080 1 + 18371965 c i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166840 1 - 3566421 c i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7366477 1 + 9267652 c i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chr22 32855875 0 - 46535552 I e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e panTro5.chr7 52587054 0 + 166211670 C a score=4095.000000 s hg38.chr14_KI270725v1_random 99665 1 + 172810 a s nomLeu3.chr17 44110105 1 - 99891981 a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52341425 1 + 185818997 a i rheMac8.chr3 C 0 I 1577 s macFas5.chr3 124987122 1 - 192294377 a i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7567630 1 - 10077455 a i cerAty1.NW_012000909v1 C 0 I 1609 s chlSab2.chr21 121507776 1 - 127223203 a i chlSab2.chr21 C 0 I 1473 s manLeu1.NW_012105809v1 616876 1 + 1799296 a i manLeu1.NW_012105809v1 C 0 I 1535 s saiBol1.JH378145 17632081 1 + 18371965 a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2166841 1 - 3566421 a i cebCap1.NW_016107540v1 C 0 I 1441 s aotNan1.NW_018514471v1 7366478 1 + 9267652 a i aotNan1.NW_018514471v1 C 0 I 1144 e ponAbe2.chr22 32855875 0 - 46535552 I e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e panPan2.chr7 74646351 0 + 162613886 C e panTro5.chr7 52587054 0 + 166211670 C a score=1097.000000 s hg38.chr14_KI270725v1_random 99666 2 + 172810 CA s ponAbe2.chrUn 5671212 2 + 72422247 ca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44110106 2 - 99891981 ta i nomLeu3.chr17 C 0 I 1914 s macFas5.chr3 124987123 2 - 192294377 ta i macFas5.chr3 C 0 I 1097 s saiBol1.JH378145 17632082 2 + 18371965 ta i saiBol1.JH378145 C 0 I 1163 e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e rheMac8.chr3 52341426 1577 + 185818997 I e panPan2.chr7 74646351 0 + 162613886 C e panTro5.chr7 52587054 0 + 166211670 C a score=329.000000 s hg38.chr14_KI270725v1_random 99668 6 + 172810 CTGCTG s ponAbe2.chrUn 5671214 6 + 72422247 ctgcca i ponAbe2.chrUn C 0 C 0 e gorGor5.CYUI01000341v1 8902 0 - 150013 C e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I e panPan2.chr7 74646351 0 + 162613886 C e panTro5.chr7 52587054 0 + 166211670 C a score=3384.000000 s hg38.chr14_KI270725v1_random 99674 6 + 172810 TTTTGC s panTro5.chr7 52587054 6 + 166211670 ttttgc i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8902 6 - 150013 ttttgc i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671220 6 + 72422247 ttttgc i ponAbe2.chrUn C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I e panPan2.chr7 74646351 0 + 162613886 C a score=10580.000000 s hg38.chr14_KI270725v1_random 99680 17 + 172810 TGATGCTCCTCttttgt s panTro5.chr7 52587060 17 + 166211670 tgatGCTCCTCttttgt i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8908 17 - 150013 tgatGCTCCTCttttgt i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671226 17 + 72422247 tgatGCTCCTCTTTTGT i ponAbe2.chrUn C 0 C 0 s papAnu3.chr3 122251640 17 - 180432695 ttttttttttttttttt i papAnu3.chr3 N 0 I 279 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I e panPan2.chr7 74646351 0 + 162613886 C a score=50009.000000 s hg38.chr14_KI270725v1_random 99697 98 + 172810 caattttttcttcatgttattatgctttgttattagttcatgtattagttttctagggctcccataaccaactaacacaaactgggtgccttgaacaa s panTro5.chr7 52587077 98 + 166211670 caacttttccttcatgttattatgcttttttattagttcatgtattagttttctagggctgccataaccaagtaacacaagctgagtgccttgaacaa i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 8925 98 - 150013 caatttttgcttcatgttattatgctttgttattagttcatgtattagttttctagggctcccataaccaactaacacaaactgggtgccttgaacaa i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671243 98 + 72422247 CAATTTTTGCTTCATGTTATTATGCTTTGTTATTAGTTCAtgtattagttttctagggctgccgtaaccaagtaacataaactgggtgccttgaacaa i ponAbe2.chrUn C 0 C 0 e papAnu3.chr3 122251657 279 - 180432695 I e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I e panPan2.chr7 74646351 0 + 162613886 C a score=144.000000 s hg38.chr14_KI270725v1_random 99795 1 + 172810 c s panTro5.chr7 52587175 1 + 166211670 a i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 9023 1 - 150013 c i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671341 1 + 72422247 c i ponAbe2.chrUn C 0 C 0 s papAnu3.chr3 122251936 1 - 180432695 c i papAnu3.chr3 I 279 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I e panPan2.chr7 74646351 0 + 162613886 C a score=5347.000000 s hg38.chr14_KI270725v1_random 99796 6 + 172810 atacat s panTro5.chr7 52587176 6 + 166211670 ataaat i panTro5.chr7 C 0 C 0 s panPan2.chr7 74646351 6 + 162613886 atacat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 9024 6 - 150013 atacat i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671342 6 + 72422247 ataaat i ponAbe2.chrUn C 0 C 0 s papAnu3.chr3 122251937 6 - 180432695 ctaaat i papAnu3.chr3 C 0 I 10 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=8424.000000 s hg38.chr14_KI270725v1_random 99802 10 + 172810 ttatagtctt s panTro5.chr7 52587182 10 + 166211670 ttattgtctt i panTro5.chr7 C 0 C 0 s panPan2.chr7 74646357 10 + 162613886 ttatagtctt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 9030 10 - 150013 ttatagtctt i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671348 10 + 72422247 ttatagtctt i ponAbe2.chrUn C 0 C 0 e papAnu3.chr3 122251943 10 - 180432695 I e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=11325.000000 s hg38.chr14_KI270725v1_random 99812 8 + 172810 atagtcct s panTro5.chr7 52587192 8 + 166211670 atagtcct i panTro5.chr7 C 0 C 0 s panPan2.chr7 74646367 8 + 162613886 atagtcct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 9040 8 - 150013 atagtcct i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671358 8 + 72422247 atagtcct i ponAbe2.chrUn C 0 C 0 s papAnu3.chr3 122251953 8 - 180432695 atagtcct i papAnu3.chr3 I 10 N 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=1178380.000000 s hg38.chr14_KI270725v1_random 99820 1431 + 172810 ggaagctaaaagtctgagattgaggtgtcagcagggatggtccctacaagggctatgagagaaagtctgttctgtgccttg-tttcttgcttctggtggtttagtggcagtctttggccttccttggctaatctctgccctcataatcacatggtactctccctgtgtgtatgtctccctctactcaa-ttttttttttttataaggacatcagtcatattgaattcaggctcgtctgattttatcttaacttaatcacctgtaaagaacctattttctaatgaggtcattttcagtggttaggatttcagcatctatatagaggaaacaatttagctgatatctgtgcatacatgactgtaatagctatgtcttccaaaatccttgacctccttattactacaatataaatatttaaaatcctattcacatttttaatagtctatatcgtgtgttatgagtataatgagttcagtgttcttatgattgctctttgcatgatattttttatcatctttttactttcaatccattagtatccttgcatctcc-------------------gggtatattgggatcacttgttttgatccagtccgacaatctctgcctcttgattggactttaatctgctcacatttaatattataattggtataattctatttatgactgccattttacagtttgttttctatatttcccaaatatttttctttattgctttattttacaatgaatgaatattttctaaaacagggaactttagattactaatgaattattttactatatatttttgagaatttttgttgttgttgtaagtttaccatataagtacatggaaaactagttattcaaatcgtcttccaatttatactagtaaactttcattaatacatagaaacatcattcttttagaaatctcttttatttcttccattttaaagtattatcactttacacattacatctattaaagtcacaaagccaacaatacattttagtaattattactttaccatctagtgggattaccttatcacaatacattattcttccaactatctcctttttgatgttactggaaaatatgtcatagacatgttacatttctacatgtcaaatactcagcaatacattatgcacatattattattatcat---------------tgagacggagtctccctctgtcgcccaggctggagtgcagtgg--cacaatctccgctcactgcaagctccatctcccggcttcatgccatttttctgcttcagcctcccgagtagctgggactacaggcgcccgccatcatgcccggctcattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatcttctggcctcgtaatacgcctgcctcggcctcccaaagtgctgagattacaggcatgagccatcgtgcctggc s panTro5.chr7 52587200 1467 + 166211670 ggaagctaaaagtctgagattgaggtgtcagcagggatggtcccttcaagggctatgagaggaagtctgttctatgccttg-tttctagcttctggtggtttagtggcagtctttggcattccttggctaatctctgtcctcataatcacatggtactctccctgtgtgtatgtctccctctactcaaatttcttctttttataaagacatcagtcatattgaattaaggctcatctgattttatcttaacttgaccacctgcgaagaaactatttcctaatgaggtcgtattcagaggttaggatttcagcatctatatagaggaaacaatttagctcatatcagtgcatatatgattgtaatagccatgtcttcctaaagcattgacccccttattactacaatataaatttttaaaatcctattcacatttttaatagtctatattgtgtgttgtgagtataatgagttcagtgttcttatgattgctctttgcatgatattttttgtcacctttttactttcaatccattagtatccttgcatctcaaatgtgccttctctagacagcatatattgggatctgttgttttaatccagtctgacaatctctacctcttgactggattttaatctactcacatttaatattataattggtataattctatttatgtctgccattttactgtttgttttgtatatttctcaaatatttttctttattgctttattttgcaatgaatgaatattttctaaaatagagaacgttagattactaatgaattattttactatatatttt-gagaatttttgttgttgttgtaagtttaccacacaggtatatggagaattaattattcaaatcatcttccaatttacactagctaaattttagtaatacatagaaacatcattcttatacaaatctgttttatttcctccattttaaactattatcactttacacattacatctattaaagttataaagctgacagtacattttagtaattattactttaccatctatagtaattaccttatcacaaaacatttttcttccaactaccccctttttgatgttattggaaaatatgttatagacatattacatttctacatgtcaaatactcagcaatacattatgcacatattattattattatcattattattattattgacatggagtctcactctgtcacccacgctggagtacagtggagcacaatctctgctcactgcaagctccgtctccctggttcatgccattctcctgcctcagcctcccaagtagctgggactacaggcgcctgccatcacgcctggcttattttttgtatttttagtagagacagggtttcactgtgttagccaagatggtcttgatctcctggcctcgtaatacgcccatctcggccacccaaagtgctgagattacaggcgtgagcctttgtgcccagc i panTro5.chr7 C 0 C 0 s panPan2.chr7 74646375 1434 + 162613886 ggaagctaaaagtctgagattgaggtgtcagcagggatggtcccttcaagggctacgagagaaagtctgttctatgccttg-tttctagctcctggtggtttagtggcagtctttgacattccttggctaatctctgccctcataatcacatggtactctccctgtgtgtatgtctccctctactcaaatttcttctttttataaggacatcagtcatattgaattcaggctcatctgattttatcttaacttgatcacctgcaaagaacctatttcctaatgaggtcatattcagtggttaggatttcagcatctatatagaggaaacaatttaGTTCCTATCTgtgcatacatgattgtaatagctatgtcttccaaaagtgttgacccccttattactacaatataaattttaaaagtactattcacatttttaatagtctatatcgtgtgttatgagtataatgagttcagtgttcttatgattgctctttgc---atattttttgtcatcttcttactttcaatccattagtatccttgcatctca-------------------gcgtatattgggatcacttgttttaatccagtctgacaatctctgcctcttgattggactttaatctgctcacatttaatattataattggtataattctatttatgtctgccattttaccgtttgttttgtatatttctcaaatatttttctttattgctttattttgcaatgagtgaatattttctaaagcaaggaactttagattactaatgaattattttactatttatttttgagaatttttgttgttgttataagtttaacatataagtatatggaaaattaatttttcaaatcgtcttccaatttatactagtaaacttttagtaatacatagaaacatcattcttttatgaatctcttttatttcctccattttaaggtattatcactttacacattacatctattaaagttacaaagccaataatacattttagtaattattactttaccatctagagggattaccttatcacaatacatttttcttccaactacctcctttttgatgttactggaaaatatgttatagacatgttacatttctacatgccaaatactcagcaatacattatgcacatattattattattat---------tatcattgagacggagtcttcctctgtcgcccaggctggagtgcagtgg--cacaatctatgctcactgcaagctccatctcccggcttcatg-cattcttctgcttcagcctcctgagtagctgggattacaggtgcccgccatcacgcctggctaattttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcaatcttctggcctcgtaatatgcccgcctcggcctcccaaagtgctgagattacaggcatgagccatcgtgcccggc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 9048 1436 - 150013 ggaagctagaaatctgagcttgaggtgtcagcagggatggtcccttcaagggctatgagagaaagtctgttctatgccttg-tgtctagcttctggtggcttagtggcagtctttggcattccttggctaatctctgccctcataatcacatggtactctccctgtgtgtatgtctccctctactcaaatttcttctttttataaggacatcagtcatattgaattcaggctcatctgattttatcttaacttgatcacctgcaaagaacctatttcctcatgaggtcatattcagtggttaggatttcagcatctatatagaggaaacaatttagctcatatctgtgcatacatgattgtaatagctatgtcttcctaaagcgttgacacccttcttactacagtataaatttttaaaatcctattcacatttttaatagtctatattgtgtgttatgagtataatgagttcagtgttcttatgattgccctttgcatgat-ttttttgtcgtctttttactttcaacccatcagtatccttgcatctca-------------------gcgtatattgggatcacttgttttaatccagtctgacaatctctgcctcttgattggattttaatctgttcacatttaatattataattggtataattctgtttatgtctgccattttaccgtttgttttgtatatttctcaaatatttatctttattgctttattttgcaatgaatgaatattttctaaaatagggaactttagattactaatgaattattttactatatatttttgagaatttttgttgttgttgtaagtttaccatataggtatatggaaaattaattattcaaatcatcttccaacttatactagtaaaatttcagtaacacatagaaacatcattcttatacaaatctcttttatttcctccgttttaaagtattatcactttacacattacatctattaaagttacaaagccaacaatatattttagtaattattactttaccatctagagtgattaccttatcatgatacatttttcttccaactacctcctttttgatgttactggaaaatatgttatagacatattacatttctgcatgtcaaatactcagcaatacattatgcatatattattattattat---------tatcattgagacggagtctccctctgttgcccagactggagtgcattgg--cacagtctccgctcactgcaagctccatctcctggcttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccatcacgcccga-taattttttgtatttttagtagagacggggtttccttatgttagccaggatgctctcaatctcctggcctcgtaatatgcccgcctcagcctcccgaaatgctgagattacaggtgtgagccatcgtgcccggc i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5671366 1433 + 72422247 ggaagctaaaaatctgagatcgaggtgtcagcagggatggtcccttcaagggctatcagagaaagtctgttctatgccttgttttctagcttctggtggtctagtggcagcctatggcattccttggctaaactctgccctcataatcacatggtactctccctgtgtatatgtctccctctactcaaatttcttctttttataaggacatcagtcatattgaattcaggttcatctgattttatcttaacttgatcacctgcaaagaacctatttcctaatgaggtcatattcagcggttaggatttcagcatctatatagaggaaacaatttagctcaAATCTgtgcatacatgatggtaatagctatgtcttccgaaagcgttgacccccttattcctacaatataaatttttaaaatcctattcacatttttaatagtctatattgtgtgttgtgagtataatgagttcagtgttcttatgattgctctttgcatgatattttttgtcatctttttactttcaatccattagtatccttgcatctca-------------------gcgtatattgggatcacttgttttaatccagtctgacaatctctgcctgttgattggattttaatctgctcacatttaatattataattggcataattctatttatgtctgccattttaccgtttgttttgtatatttcacaaatatttttctttattgctttattttgcaatgaatgaatattttctaaaatagggaactttagattactaatggatgattttactatatatttttgagaatttttgttgttg---taagtttaccatataggtatatggaaaattaattattcaaatcatcttccaatttatactagtaaacttttagtaatacatagaaacatcatttttatacaaatctcttttatttcctccattttaaagtattatcactttacacattacatctattaaagttacaaagccaacaatacattttagtaattattactttaccatctagagtgattacattatcacaatacagtttgcttccaactacctcctttttgatgttactggaaaatatgttatagacatattacatttctacatgtcaaatactcagcaatacattatgcacatattattattattat------------cattgaggtggagtctccctctgtcgcccaggctggagtgcagtgg--cacaatctccgctcactgcaagctccatttcccggcttcatgccattcttctgcttcagcatcccgaatagctgggactacaggcacccgccatcacgcccggctgattttttgtatttttagtagagatggggtttcactgtgttagccaggagggtctcgatctcctggcctcataatacacccacctcagcctcccaaagtgctaagattacaggcgtgagccatcgtgcccggc i ponAbe2.chrUn C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17632084 1163 + 18371965 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e calJac3.chr8 20045084 2840 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=3279.000000 s hg38.chr14_KI270725v1_random 101251 2 + 172810 cg s panTro5.chr7 52588667 2 + 166211670 ca i panTro5.chr7 C 0 C 0 s panPan2.chr7 74647809 2 + 162613886 ca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 10484 2 - 150013 ca i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5672799 2 + 72422247 ca i ponAbe2.chrUn C 0 C 0 s calJac3.chr8 20047924 2 + 128169293 ca i calJac3.chr8 I 2840 C 0 s saiBol1.JH378145 17633247 2 + 18371965 ca i saiBol1.JH378145 I 1163 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e aotNan1.NW_018514471v1 7366479 1144 + 9267652 I e cebCap1.NW_016107540v1 2166842 1441 - 3566421 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=425338.000000 s hg38.chr14_KI270725v1_random 101253 158 + 172810 ttatacacatattattttataaacaatttatgataaagagaaaacatgcatttatactgtcttttataatgttaatattacctataccagtgcttttttaaaaatgtgcattcaaatgactgtcttttgtaactggctttt-gccttaggaatttattt s panTro5.chr7 52588669 159 + 166211670 ttatgcacatattattttataaacaagttatggtaaagagaacatatgcatttctactgtcttttataatgttattattacctatgccagtgctttttaaaaaatgtggattcaaatgactgtcttgtgtaacttgcttttagccttaggaatttattt i panTro5.chr7 C 0 I 1 s panPan2.chr7 74647811 159 + 162613886 ttatacacatattattttataaacaatttatgataaagagaaaacatgcatttatactgtcttttataatgttaatattacctatagcagtgcttctttaaaaatgtggattcaaatgactgtcttgtgtaacttgcttttagccttaggaatttattt i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000341v1 10486 159 - 150013 ttatacacatattattttataaacaatttatgataaacagaaaacatgcatttctactgtcttttataatgttaattttacctataccagtgctttttaaaaaaagtggattcaaatgactgtcttgtgcaacttgcttttagccttaggaatttattt i gorGor5.CYUI01000341v1 C 0 I 1 s ponAbe2.chrUn 5672801 159 + 72422247 ttatacacatgttattttataaacaatttatgataaagagaaaacatgcatttctactgtcttttataatgttaatattacctataccagtgccttttaaaaaatgtggattcaaatgactgtcttgtgtaacttgcttttagccttaggaatttattt i ponAbe2.chrUn C 0 I 1 s calJac3.chr8 20047926 158 + 128169293 ttatgcacatattattttataaataagttatgataaagagaaa-tgtgcatttctactgttttttataatgttattattacctacaccagtgctttttttaaagtgtgtatttaaataactgtcttctggaacttgcttttagccttaggaatttattt i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17633249 156 + 18371965 ttatgcaca-attattttataaataagttatgataaagagaaagtgtgtatttctactgccttttgtaatgttattattacctataccagtgc--tttttaaaatgtggatttaaataactgtcttctgggacttgcttttagccttaggaatttattt i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2168283 158 - 3566421 ttatgcacatattattttataaataagttatgataaagagaaaatgtgcatttctactgttttttataatgttattattacctataccagtgc-ttttgtaaaatgtggatttatataactgtcttctggaacttgcttttagccttaggaatttattt i cebCap1.NW_016107540v1 I 1441 I 1 s aotNan1.NW_018514471v1 7367623 152 + 9267652 ttatgcacatattattttataaataagttatgataaaa------tgtgcatttctactgttttttataatgttattattacctataccagtgc-ttttttaaaatgtggatttaaataactgtcttctggaacttacttttagccttaggaatttattt i aotNan1.NW_018514471v1 I 1144 I 40 e canFam3.chr18 4070834 4772 + 55844845 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=-1972.000000 s hg38.chr14_KI270725v1_random 101411 14 + 172810 agtt------------tttttttttt s panTro5.chr7 52588829 12 + 166211670 agtg------------tttttttt-- i panTro5.chr7 I 1 C 0 s panPan2.chr7 74647971 14 + 162613886 agtt------------ttttgttgtt i panPan2.chr7 I 1 I 7 s gorGor5.CYUI01000341v1 10646 14 - 150013 ggtg------------ttttttcttt i gorGor5.CYUI01000341v1 I 1 C 0 s ponAbe2.chrUn 5672961 14 + 72422247 agtg------------tttttttttt i ponAbe2.chrUn I 1 C 0 s calJac3.chr8 20048085 6 + 128169293 aata------------tt-------- i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17633406 18 + 18371965 agtatttttttttttttt-------- i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2168442 6 - 3566421 agta------------tt-------- i cebCap1.NW_016107540v1 I 1 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e aotNan1.NW_018514471v1 7367775 40 + 9267652 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44110108 1914 - 99891981 I a score=37617.000000 s hg38.chr14_KI270725v1_random 101425 30 + 172810 tttt---tatatatggtaggtctgccagcaaca---- s panTro5.chr7 52588841 23 + 166211670 ----------gtatggtaggtctgccagcaaca---- i panTro5.chr7 C 0 C 0 s panPan2.chr7 74647992 30 + 162613886 ttgt---tttttatggtaggtctgccagcaaca---- i panPan2.chr7 I 7 C 0 s gorGor5.CYUI01000341v1 10660 31 - 150013 tttt--gtttgtttggtaggtctgccagcaata---- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5672975 33 + 72422247 ttttttttttggatggttggtctgccagcaaca---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44112022 30 - 99891981 tttt---tttctatggtaggtctgccagcaaca---- i nomLeu3.chr17 I 1914 C 0 s calJac3.chr8 20048091 34 + 128169293 tttt---ttggtatgataggtctgctttgaagaccaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17633424 34 + 18371965 tttt---ttggtatggtaggtctgccttccataccaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2168448 33 - 3566421 tttt---tt-atatggtagctctgccttgcatgccaa i cebCap1.NW_016107540v1 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e aotNan1.NW_018514471v1 7367775 40 + 9267652 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I a score=2581963.000000 s hg38.chr14_KI270725v1_random 101455 765 + 172810 acttcagttaatatttctgttaatttgggtaagtctttgtgttatcttcatttttgaaaaataattgctggataaggaattggtggctgacagttta---tttttgtttgcatcttttgactatattattctactgcctcttgccttccattgtttctctt---aagtcagctgttactcttaCaaaacataggtgctcaaaaaataaacatgtgcatg-----aatatttacagcagtaatatttatacagtcaaaaagtggaaacaatccatatgcttgttgactcataaatggacacccaa-----------------------------tttccagctataacaaagaatgaagtacttatacatggtataatatgggtgaaatttgaaagcattatgttaaattcacagaaggacaaacattacttgattttattcac-atgaaacatcaggaatcggcaaatcaattgggatataaatcagattagtggtcattagggctcagggaagcagaatagggtgtaacaacttaatgcataatgggcttttagaagggacatgatgaaattatcctggaacattgtgaatattctgaaagcaattgcattgtatgttttaaaatggttaagttattaattttatattatgtga-tttttgcctt-aGAAAACAAAAAAGAGAAAATAGccttactgtatatacaaaaaactcaagatgtgttacaaatttatatgtgaaatccaaaaTACTGTAATATTTAAGGGATAGCTAAGTAGAATAACACT-AAAATTTAACATAATGAAA-T s panTro5.chr7 52588864 763 + 166211670 acttcagttaatatttctgtttatctgggtaagtctttgtgttatcttcatttttgaaaaataattactgaataaggaattggtggtagacagttt-----tttcctttgcatcttttgaatatattattctactgcctcttgccttccattgtttctgtt---aagtcagctgttaatcttaCaaaacataggtgctcaaaaagtaaacatgtacatg-----aatatttatagcagtaatattcatacagtcaaaaagtggaaacaatccatatgcttgtcgactcataaatggacacccaa-----------------------------ttttcagctataacaaagaatgaagtacttatacatggtaaaatattggtgaaatttgaaagcattatgctaagtgcacaaaaggacaaatattacttgattttattcac-atgaaacatcaggaattggcaaatcaattgggatataaatcagattactggttattagggctcagggaagcagaatacggtgtaacaactttatgcataatgggtttttagaagggacatgatgaaattgtcctggaacattgtgaatatactaaaagcaactgcattgtatactttaaaatggttaagttgtgaattttatattgtgtga-tttgtacctt-aaAAAACAGAAAAGAGAAAATAGCCTTAGTCTATACATAATAAACTCAAGATGTGTTAAAAATTTATATGTGAAATCCAAGATACTATAATATTTAAGGAATAGCTAAGTAGAATAACACT-AAAATTTAGCATAATGAAA-T i panTro5.chr7 C 0 C 0 s panPan2.chr7 74648022 768 + 162613886 acttcagttaatatttctatttatctgggtaagtctttgtgttatcttcattttcaaaaaataattgctggataaggaattggtggctgacagtttt---ttttcctttgcatcttttgactatattattctactgcctcttg-cttccattgtttctgtt---aagtcagctgttactcttaCaaaacataggtgctcaaaaaataaacatgtgcatgaatataatatttacagcagtaatattcatacagtcaaaaagtggaaacaatccatatgcttgctgacttataaatggacacccaa-----------------------------tttccagctataacaaagaatgaagtacttatacatggtataatatgggtgaaatttgacagcattatgttaagttcacagaaggacaaacattacttgattttattcac-atgaaacatcaggaatcggcaaatcaattgggatataaatcagattagtggtcattagggctcagggaagcagaatagggtgtaacaactttatgcaaaatgggttgttagaagggacatgatgaaattgtcctggaacattgtgaatatactaaaagcaattgcattgtatgttttaaaatggttaagttattaattttatattatgtga-tttttgcctt-aaAAAACAAAAAAGAGAAAATAGCCTAACTGTATATACAAAAAACTCAAGATGTGTTACAAATTTATATGTGAAATCCAAAATACTATAATATTTAAGGAATAGCTAAGTAGAATAACACT--GAATTTAACATAATGAAA-T i panPan2.chr7 C 0 I 1427 s gorGor5.CYUI01000341v1 10691 759 - 150013 acttcagttaatatttctgtttctctgggtaagtctttgtgttatcttcatttttgaaaactaattgctggataaggaattggtggctgacagttt----tttttctttgcatcttttgaatatattattctactgcctcttgccttccattgtttctctt---aagtcagctgttaatcttaCaaaacataggtgctcaaaaaataaacatgtgcatg-----aatatttacagcagtaatattcatacagtcaaaaagtggaaacaatccatatgcttgttgactcataaatggacacccaa-----------------------------ttttcagctgtaacaaagaatgaagtacttatacatggtataatatgggtgaaatttgaaagcattatgttaagtgcacaaaaggacaaatattacttgattttattcac-gtgaaacatcaggaattggcaagtcaattgggatataaatcagattagtgttcattagggctcagggaagcagaatagggtgtaacaactttatgcataatgggtttttagaagggacatgatgaaattgtcctgcaacattgtgaatatactaaaagcaactgcgttgtatgctttaaaatgcttaagttattaattttatattatgtga-tttttacctt-aaaa-----aaAAGAGAAAACAGCCTTACTCTATACATAATAAACTCAAGATGTGTAACAAATTTATATGTGAAATCCAAAATACTATAATATTTAAGGAATAGCTAAATAGAATAACACT-AAAATTTAACATAATGAAA-T i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chrUn 5673008 762 + 72422247 acttcagttaatatttctgtttatctgggtaagtctttgtgttatcttcatttttgaaaaataattgctggataaggaattggtggctgacagttt----ttttcctttgcatcttttgaatatattattctactgcctcttgccttccattgtttctgtt---aagtcagctgttaatcTTACaaaacataggtgctcaaaaaataaac--gtgcatg-----aatatttacagcggtaatattcatacagtcaaaaagtggaaacaatccatatgcttgttgactcataaatggacacccaa-----------------------------tttccagctataacaaagaatgaagtacttatacgtggtataatatgggtgaaatttgaaagccttatgttaagtgcacaaaaggaaaaatattacttgattttattcac-atgaaacatcaggaactggcaaatcaattgggatgtaaaccagattagtggtcattagggctcagggaagcagaatagggtgtaacaactttatgcataatgggtttttagaagggacatgatgaaattgtcctggaacattgtgaatatgctaaaagcaactgcattgtatactttaaaatggttaggttattaattttgtattatgtga-tttttacctt-aaAAAACAAAAAAGAGAAAATAGCCTTACTCTATACAGAATAAACTCAAGATGTGTTACAAATTGATATGTGAAATCCAAAATACTATAATATTTAAGGAACAGCTGAGTAGAATAACACT-AAAATTTAACGTAATGAAA-T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44112052 764 - 99891981 acttcagttaatgtttctgtttatctgggtaagtctttgtgttatcttcatttttgaaaaataattactggataaggaattggtggtagacagtttt---ttttcctttgcatcttttgaatatattattctactgcctcttgccttccattgtttctgtt---aagtcagctgttaatctCACAAAGCataggtgctcaaaaaataaatatgtacatg-----aata-ttatagcagtaatattcatacagtcaaaaagtggaaaccatccatatgcttgttgactcataaatggacacccaa-----------------------------ttttcagctataacaaagaatgaagtacttatacatggtaaaat-ttggttaaatttgaaagcattatgctaagtgcacaaaaggacaaatattatttgattttattcac-atgaaacatcaggaattggcaaatcagttgggatataaatcagattagtggtcattagagctcagggaagcagaatacagggtaacaactttatgcataatggatttttagaagggacaagatgaaattgtcttggaacactgtgaatatactaaaagcaactgcattgtgtactttaaaaaggttaagttgtgaattttatattgtgtgattttttacctt-aaAAAACAAAAAAGAGAAAATAGccttactctatacaaaataaactcaagatgtgttacaaatttatatgtgaaatccaaaatactataaTACTTAAGGAATAGCTAAGTAGAATAACACT-AAAATTTAGCATAATGAAA-T i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20048125 790 + 128169293 ac--cagctaatatttctgtttatctgggt----ctttgtgttaccttcatttctgcaaaataattactggatataaaattggtggttgacag-ttttt-tttcccttcacaccttttgaatatattagtctactgccttttacctttcatttcttctgttgagaagtcagctgttaatcttacagaacataggtgttcaaaaaataaacttgtacata-----aatatttatagcagtaatattcatagagtcaaaaagtggaaacaatccatatgcctgttgactcataaatggacacacaaaatgtgatatattcactcaatgagatga---ttcagctataacaaagaatcaagtacgtacacatggcataatatgggtgaaatttgaaagcattatgctaagtgcacaaaaggacaaatattacttgattttattcac-atgaaacatcaagaattggcaaatcaattgggatataaatcagattaatggtcactaggactcaggaaagcagaataggaggtgacaactttatgcataatggattg-tggaagggacatgatgaaattgtcctggaacattgtaaatttactgaaagcaactgcattgtatactttaaaatgggaaagttacaaattttatattatgtaa-attttaccttaaAAAAATAAAAAAGAGAAAACAGACTTACTCTATACATAATAAATTCAAGATGTGTTACAAATTTGCATGTAAAATTCGAAATGCTATAGTATTTAAGGAATAGCTAAGAAGAATATCACtaaaaatttagtataatgaaaa- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17633458 798 + 18371965 acttcagctaatatttctgtttatctgggtaagcctttgtgttaccttcatttctgaaaaataattactaactataaaattggtggttgacagtttttt-tttcccttcacaccttttgaatatattattctactgccttttacctttcattttttctgttgagaagtcagttgttaatcctacagaacataggtgttcaaaaaataaacttgtacata-----aatatttatagcaataatattcatagagtcaaaaagtggaaacaatctatatacctgttgactcataaatggacacacaaaatgtgatatactcacttgatgagatgatttttcagctataacaaagaatgaagtacttacacatggcataatttggttgaaatttgaaagcattatgctaagtgcacaaaagaacaaatattacttgattttattcacaatgaaacatcagaaattggcaaatcaattgggatataaatcatattaatggtcactaggactcagggaagcagaaaaggaagtgacaactttatgcataatggatta-tgggagggacatgatgaaattgtcctggaacgttgtgaatttactgaaagcaactgcatcatatactttaaaatgggaaagttgtgaattttatattatgtta-attttacctt-aaaaaataaaaaaGAGAAAACAGCCTTACACTATACATAATAAATTCAAGATGTGTTACAAATTTGTGTGTAAAATCCAAAATGCTCTAATATTTAAGGAGTAGCTGAAAAAAA-ATCACTAAAAATTCAGTAAAATGAAA-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2168481 799 - 3566421 acttcagctaatatttctgtttatctgggtaagtctctgtgttaccttcattttggaaaaataaatactggatataaaattggtggttgacagtttctt-ttttccttcacaccttttgaatatattattctactgcctttcacctttcattttttctgttgagaagtcagttgttagtcttacagaacataggtgttcaaaaaataaacttgtacata-----aatatttatagcagtgatattcatagagtcaaaaaggggaaacaatccatatgcctgttgactcataaatggacacaaaaaatgtgatatattcactcagtgagatgatttttcagctataacaaagaatgaagtacttacacgtggcataatatgggtgaaatttgaaagcattatgctaagtgcacaaaaggacaaatattacttgattttattcac-atgaaacataaagaactggcaaatcaattgggatataaatcagattagtgatcactaggactcagggaagcagaataggaggtgacaattttatgcataatggatta-tggaagggacatgatgaaattgtcctggaacattgtgaatttactgaaagcaattgcattgtatactttaaaatgggaaagttgagaattttatattatgtga-attttaccttaaaaaaataaaaaaGAGAAAACAGACTTACTCTACACATAATAAATTCAAGATGTGTTACAAATTTGTATGTAAAATCCAAAATGCTATAATATTTAAGGAATAGCTAAGAAAAATATCATTAAAAATTTAGTATAATGAAA-- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7367815 798 + 9267652 acatcagctaatatttctgtttatctgggtaagtctttgtgttaccttcatttctgaaaaataattactggatataaaatgggtggttgacagttttttgttttccttcacaccttttgaatatattattctactgccttttacctttcattttttctgttgagaagtcagctgttaatcttacagaacataggtgttcaaaaaataaacttgtacata-----aatatttatagcggtaatattcatagagtcaaaaagtggaaacaatccatatgcctgttgactcataaatggacacactaaatgtgatatattcactcaatgagatgatttttcaactataacaaagaatgaagtacttacacatggcataatatgggtgaaatttgaaagcattatgctaaatgcacaaaaggagaaatattacctgattttattcac-atgaaacatcaagaattggcaaatcaattgggatataaatcagattaatggtcactaggactcagggaagcagaataggaggtagcaaatttatgcataacggatta-tggaa-ggacatgatgaaattgtcctggaacattgtgaatttactgaaagcaactgcattgtatacttcaaaatgggaaagtcgtgaattttatatcatgtga-attttacctt-aaAAAATAAAAAAGAGAAAATAGACTTACTCTATACATAATAAATTCAATATGTGTTACAAATTTGTATGTAAAATCCAAAATGCTGTAATATTTAAGAAATAGCTAAGAAGAATATCACTAAAAATTTAGTATAATCAAA-- i aotNan1.NW_018514471v1 I 40 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I a score=1097304.000000 s hg38.chr14_KI270725v1_random 102220 466 + 172810 ATTTCCTTAGAAAAGAAAAAAGCACAGTAATTAAAAAGGGAAATATAGTT----AATATTTTTTCCCTCCATTAAGCATACCATTAAC---------------TGATT----AAAAAATCAAGCTGCAATTATGTAAACTACATTTTCTGAAACCATAAAGAAAATaagaagtgaaaagggattt-gggaaaaaaatccaaaggtacagtcaactacac--a-aaaaaagcttagtctcattaatcattatgaaaatgcaaattgtagttgaaaaaagataaaactacaattcaaagagaaagcctaaaattTCAACCCCCCCAAAATTCTGGGTTTTGCAGAGCTGGGATGGAATAGGGCTCCTAACCTTACAACAATGTAATAACCAAACTGACTTCAAAGTCATGACTTTATTTTTATAGCAACCAGGTTGCCAAGAACTGAGTCAAAATGTCAGGGAAAGGAGGCACCTGCAAGGAGAAAGGGGACAGA s panTro5.chr7 52589627 470 + 166211670 ATTTCCTTAAAAAAGAAAAAAACACAGTAATTAAAAAGGGAAATATAGTTCATTAATATTTTTTCTCTCCATTAAGCATGCCATTAAC---------------TGAGT----AAAAAATCAAGCTGCAAT-ATATAAACTACATTTTCTAAAATCATAAAGAAAATATGAAAtgaaaagggattt-gggaaaaaaatccaaaggtacagtcaactacac--acaaaaaagcttagtctcattaatcattaggaaaatgcaaattgtaactggaataagataaaactacaattcaaagagaaaggctaaaattTCAAACCAAAAAAAAATCTGGGTTTTGGAGAGCTGGGAAGGAATAGGGCTCCTAACCTTACAACAATGAAAGAACAAAACTAACTTCAAAGTCATGACTTTATTTTTATAGCAACCAGGTTGCCAAGAACTGAGTCAAAATGTAAGGGAAAATAAGCACCTGCAAGAAGAAAGAGGACGGA i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 11450 462 - 150013 ATTTCCTTAAAAAAGAAAAAAGCACAGTAATT-AAAGGGGAAATATAGTT----AATATTTTTTCTCTCCATTAAGCATGCCATTAAC---------------TGAGT----AAAAAATCAAGCTGCAATTATGTAAATTACATTTTCTAAAACCATAAAGAAAA---GAAGTGAAAAGGGATTT-GGGAAAAAAATCCAAAGTTAGAGTCAACTACAC--A-AAAAAAGCTTAGCGTCATTAATCATTATGAAAATGAAAATTGTAACTGAAATAGGATAAAACTACAATTCAAAGAGAAAGCCTAAAATTTCAACCCCCCAAAAATTCTGGGTTTTGGAGAGCTGGGATTgaatagggctcctaaccttacaacaatgaaagaacccaactaacttcaaagtcatgagtttatttttatagcaaccaggttgccaagaactgagtcaaaatgtgagggaaaacaagcacctgcaaggagaaagaggacaga i gorGor5.CYUI01000341v1 C 0 N 0 s ponAbe2.chrUn 5673770 460 + 72422247 ATTACCTTAAAAAAGAAAAAAGCATAGTAATTAAAAAGGGAAATATAGTT----AATCTTTTTTCTCTCCATTAAGCATGCCAT-------------------TGAGT----AAAAAATCAAGCTGCAAT-ATGTAAACTACATTTTCTAAAACCATAAAGAAAATACGAAATGAAAAGGGATTT-GGGAAAAAAATCCAAAGGTACAGTCGACTACAC----aaaaaagcttagtctcattaatcattatgaaaatgcaaattgtaactgaaataagataaaactacaATTCAAAGAGAAAGCCTACAATTTCAACCCCCAAAAAATTCTGGGTTTTGGAGAGCTGGGATGgaatagggctcctaaccttacaacaatgaaagaaccaaactaacttcaaagtcatgattttatttttatagcaaccaggttgccaagaactgagtcaaaatgtgagggaaaacaagcacctgcaaggagaaagaggacaga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44112816 467 - 99891981 ATTTCCTTAAAAAAGAAAAAA-CATAGTAATTAAAAAGGGAAATATAGTTCATTAATATTTTTTCTCTCCATTAAGCATGCCATTAAC---------------TGAGT----AAAAATTCAAGCTGCAAT-ATATAAACTACATTTTCTAAAATTATAAAGAAAATATGAAAtgaaaagggtctt-aggaaaataatccaaaggtacagtcaactacac----aaataagcttagtctcattcatcattatgaaaatgcaaattgtaactggaataagataaaaccacaattcaaagagaaaggttaaaatttcaaaccaaaaaaaattctgggttttggagagCTGGGAAGGAATAGGGCTGCTAACCTTATGACAATAAAAGAACCAAACTAACTTCAAAGTCATGACTTTATTTTTATAGCAACCAGGTTGCCACGAACTGAGTCAAAATGTGAGGGAAAATAAGCACCTGCAAGGAGAAAGAGGACAGA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20048915 471 + 128169293 ttttttttaaaaaa---------aCAGTAATTAAAAAGGGATATGTAATCAATTAATATTCTTTCTCTCCATAAAGCACACCAACAACATGTAAAATCAACAACATGT---AAAAAAATCAAGCTGCAAC-ATGTAAACTACATTTTCTAAAACCATGAAGAAAACATGCAATGATAAGTGATTTGGGGGAAAAAACCCAAATGTACAGTCAATTACAG-AA-AAAAAAACTT----TCCTTAATCATTATAAAAATGGAAATTGCAACTGAAATATGATAAAACTACATTTCAAAGAGAACAGCTAAAATTTCAAGCC-AAAAAAATTCTGAGTTGTGGAGCACTGGGAAGGAATAGGTCTCCTAGCCTTACCACAATAAAAGAACTAGACAGAA--CAAAGCCATGACTTTATTTTTATAGCAATCATGTTGCCAAGAACTGGGTCAAAATGTAAGGGGAACAGAGCACCCACAAAGAGTAAAAGGATGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17634256 451 + 18371965 ------TTTAAAAA---------ACCGTATTTAAAAAGGGATATGTAGTTAATTAATATTTTTTCTCTACATAAAGCACACCATTAAC---------------TGAGT---AAAAAAAACAAGCTGAGAC-ATGTAAACTACATTTTCTAAAACCATGAAGAAAACATGACATGATAAGGGATGTGGGGAAAAAAATCCAAATGTACAGTCAATTACAG----AAAAAAACTT----TCCTTAATCATTATAAAAATGCAAATTGCAACTGAAATAAGATAAAAGTACATTTCAAAGAGAAAAGCTAAAATTTCAAGCCAAAAAAAATTCTGAGTTGTGGAGTGCTGAGAAGGAATAGGTCTCCTAGCTATACAACAATAAAAGAACTAGACAGACTTCAAAGCCATGACTTTATTTTTATAGCAACCAGGTTGCCAAGAACCGGGTCAAAATGTAAGGGGAACGGAGTGCCTGCAAAGAGAAAAAGGGTAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2169280 458 - 3566421 --TTTTTTAAAAAA---------ACAGTAATTAAGAAGGGATATGTAGTTAATTAATATTTGTTCTCTCCATAAAGCACACCATTAAT---------------TGAGTAAAAAAAAAATCAAACTGCAAC-ATGTAAACTACATTTTCTAAAACCATGAAGAAAACATGCAATGATATGGGATTTGGGGAAAAAAATCCAAA--TATAGTCAATTACAGAAA-AAAAAAACTT----TCCTTAATCATTATAAAAATGCAAATTGCAACTGAAATAAGATAAAACTACATTTCAAAGAGAAAAGCTGAAATTTCAAGCC-AAAAAATTTCTGAGTTGTGGAGCACTGGGAAGGAATAGGGCTCCTAGCCTTAAAACAATAAAAGAACTAGGCAGGCTTCAAAGCCATGACTTTATTTTTACAACAACCAGATTGCCAAGAACTGAGTTAAAATGTAAGGGGAACAGAGCACCTGCAAAGAGAAAAAGGATGAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7368613 455 + 9267652 TTGTTTTTTAAAAA---------ACAGTAATTAAAAAGGGATATATAGTTAATTAATATTT-TTCTCTCCATAAAGCACACCATTAAT---------------TGAGT---AAAAAAATCATGCTGCAAC-ATGTAAACTACATTTTCTAAAACCATGAAGAAAACATGCAGTGATAAGGGATTTGGGGAAAAAAATCCAAATGTACTGTCGATTACAG--A-AAAAAAACTT----TCCTTAATCATTATAAAAATGCAAATTGCAACTGAAATAAGATAAAACTACATTTCAAAGAGAAAACCTAAAATTTCAAGCC--AAAAAATTCTGAGTTGTGGAGCGCTGGGAAGGAATAGGTCTCCTAGCCTTACAACAATAAAAGAACTAGACAGACTTCAAAGTCATGACTTTATTTTTATAGCAACCAGGTTGCCAAGAACTGGGTCAAAATGTAAGGGGAATGGAGAACCTGCAAAAAGAAAAAGGATGAA i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e panPan2.chr7 74648790 1427 + 162613886 I a score=87931.000000 s hg38.chr14_KI270725v1_random 102686 30 + 172810 TGCACTTACATAGGACAGATGCAAATAGAC s panTro5.chr7 52590097 30 + 166211670 TGCACTTACATAAGACAGATGCAAATAGAC i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 82967 30 + 126596 TGCACTTACATAGGACAGATGCAAATAGAC i gorGor5.CYUI01000522v1 N 0 C 0 s ponAbe2.chrUn 5674230 30 + 72422247 tgcacttacataggacagatgcaaatagac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44113283 30 - 99891981 TGCACTTACATAAGACAGATGCAGATAGAC i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20049386 30 + 128169293 TGCCTTTACATAGGACAGATGCAAACAGAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17634707 30 + 18371965 TGCCTTTACATAGGACAGATGCAAATAGAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2169738 30 - 3566421 TGTCTTTACATAGGACAGATGCAAATAGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7369068 30 + 9267652 TGCCTTTACATAGGACAGATGCAAATAGAT i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I e panPan2.chr7 74648790 1427 + 162613886 I a score=1473902.000000 s hg38.chr14_KI270725v1_random 102716 460 + 172810 ACCACTATGACACGTAAAGCTGGAATAATCAATACATTCCTAAGGACAAAGTGGGGCTGGTCGGATTGGGAAATGGCTGACAGCTGCAGAAGTTGGGAAAGATCCATCATCTTGAAAACTTTTTCCGCACAAACCCACTGTGATCGCTCAAGCAATTGGTAAGGAATCCAAGAGAGTCTGTATATGATACAGATCAGGGAGAGCAGAACACttgggaggtgaccaggtctttgggg-ccgagcccttttgaatgggattagtgcctttataa----------------------------------------aaga-----agctcagtggagttcttgtgtgccttccactatgtgaggacatagaaagaaggcaccatctatgaaccatgaaatgggctctcat-caacactgaatttgtgagcattttgacctgagatcttacagcctcaagaagtgtgaaaaaagaaatatctgttgttttttagtcacccagttcatgttat s panTro5.chr7 52590127 460 + 166211670 ACCACTATGACAAGTAAAGCTGGAATAATCAATAAATTCCTAAAGACAAAGTGGGGCTGGTCAGATTGGGAAACCACTGACAGCTGCAGAAGTTGGGAAAGATCCACCATCTTGAAAACTTTTTCCCCACAAACCCACTGGGATCTCTCAAGCAATTGGTAAGGACTCCAAGACAGTCTGTATATGATACAGTTCAGGGAGAGCAGAACACTGgggaggtgaccaggtcatggggg-ctgagcccttatgaatgggattagtgcctttataa----------------------------------------aaga-----agctcaatggagttctagtgtgccttccactatgtgaggacatagaaagaaggcaccatttatgcaccatgaaatgggctgtcat-caacactgaatttgtgagcatcttgacctgagatcttacagcctcaagaagtgaaaaaaaagaagtatccgttgtttttcagtcaccgagtttatgttat i panTro5.chr7 C 0 C 0 s panPan2.chr7 74650217 457 + 162613886 ACCACTATGACAAGTAAAGCTGGAATAATCAATAAATTCCCAAGGACAAAGTGGGGCTGGTCAGATTGGGAGACGGCTGACAGCTGCAGAAGTTGGGAAAGATCCATCATCTTGAAAA-TTTTTCCCCACAAACCCACTGTGATCTGTCAAGCAATTGGTAAGGAATCCAAGAGAGTCTGTATATGATACAGATCAGggagagcagaacacttcggaggtgaccaggtcttggggg-ccgagcccttatgaatgggattagtgcctttataa----------------------------------------aaga-----agctcaatggagttcttgtgtgccttccac--tgtgaggacatagaaagaaggcaccatctatgaaccatgaaatgggctctcat-caacactgaatttgtgagcatcttgacctgagatcttacagcctcaagaagtgtgagaaaagaaatatctgttgttttttagtcacccagttcatattat i panPan2.chr7 I 1427 C 0 s gorGor5.CYUI01000522v1 82997 453 + 126596 ACCACTATGACAA-TAAAGCTGGAATAATCAATAAATTCCTAAAGACAAAGTGGGACTGGTGAGATTGGGAGACCACTGACAGCTGCAG-AGTTGGGAAAGATCCATCATCTTGAAAA-CTTTTCCCCACAAACCCACTGCGA-CTCTCAAGCAATTGGTAAGGAATCCAAGAGAGTCTGTATATGACACAGatc-gggagagcagaacacttgggaggtgaccaggtcttggggg-c-gagcccttatgaatgggattagtgcctttataa----------------------------------------aaga-----agctcaatgtagttcttgtgtgccttccactatgtga-gacatagaaagaaggcaccatctatgaaccatgaaatgggctctcat-caacactggatttgtgagcatcttgacctgagatcttacagcctcaagaagtgtgaaaaaagaaatatctgttgtttttcagtcacccagtttatgttat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5674260 460 + 72422247 accactatgacaaggaaagctggaataaccaataaattcctaaagataaagtggggctggtcagattgggaaaccgctgacagctgcagaagttgggaaagatccatcatcttgaaaactttttcccCAGAAACCCACTGGGCTCTCTCAAGCAATTGGTAAGGAATCCAAGAGAGTCTGTatatgatacatatcagagagagcagaacacttgggaggtgaccaggtcttggggg-ccgagcccttatgaatgggattagtgcctttataa----------------------------------------aaga-----agctcagtggagttcttgtgtgccttcagctctgtgaggacatagaaagaaggcaccatctatgaaccatgaaatgggctctcat-caacactgaattcgtgagcatcttgacctgagatcttacagcctcaagaagtgtgaaaaaagaaatatctgttgttttttagtcacccagttcatgttat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44113313 453 - 99891981 ACCACTATGACAAGTAAAGCTGGAATAATCAATAAATTCCTAAAGACAAAATGGGGCTGGTCAGATTGGGAGACCGCTGACAGCTGCAGAAGTTGAAA-------ACCATTTTGAAAACTTTTTCCCCACAAACCCACTGGGATCTCTCAAGCAATTGGTAAGGAATCCAAGAGAGTCTGTATATGATACAGATCAaggagagcagaacactggggaggtgaccaggtcatggggg-ctgagccgttatgaatgggattagtgcctttataa----------------------------------------aaga-----agctcagtggagttctagtgtgccttccactatgtgaggacatagaaacaaggcaccatttatgaaccatgaaatgggctgtcat-caacactgaatttgtgagcatcctgacctgagatcttacagcctcaggaagtggaaaaaaagaaatatctgttgttttttagtcactcagtttatgttat i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20049416 482 + 128169293 ACCACTATTACAA-TAAAGCCGAAATAATCAATTAATTCCTAAAGGCAAGGTGGTGCTGGTCA-------------CTGACAGCTGCAGAAATTGGGAAAGATCTACCATCTTGAAAACTTTTTCCCCACATACCCATTGGGATCTCTCAAACAATTGATAAGTACTCCAAGAGAGTCTGTATATGATACAGATCAGGGACAGCAGAACACTGgggaaatgactgggtcttgggggcgcaagcccttatgaatgagattagtgtctttatgaaagaagcccaatgcaattcttgtatgccttccata-----aaga-----agcccagtggagttctcgtgtgtcctccactatgtgaggacatagaaagaaggcaccgtctatgaaccatgaaatgggctcttgtgaaactctgaacttgtgggcatcttgatctgagactttacagccgcaagaagtgt-aaaaaagaaatatctgtggttttttagttagctagtttatattat i calJac3.chr8 C 0 I 216 s saiBol1.JH378145 17634737 480 + 18371965 ACCACTATGACAAGTAAAGCTGAAATAATCAATACATTCTTAATGGCAAGGTGGTGCTGGTCA-------------CTGACAGCTGCAGAAGTTGGGAAAGATCCACCATCTTGAAAACTTTTTCCCCACAAACCCATTGGGGTCTCTCAAACAATTGATAAGTATGCCAAGAGTGTCTGTATATGATATAGATCAGGGACAGCAGAACAC--gggaaatgaccaggtcttggggg-acaagcccttatgaatgagattagtgtctttatgaaagaagcccaattgagttcttgtgtgccttccata-----aaga-----agcccagtggagttcttgtgtgccctccactatgtgaggacatacaaagaaggcaccatctatgaaccatgaaatgggctctcgtaaaactccgaacttgtgggcatcttgatctgagactttgcagctgcaagaagtgt-aaaatagaaatatctgtctttttttagtcagccagtttatattat i saiBol1.JH378145 C 0 I 215 s cebCap1.NW_016107540v1 2169768 478 - 3566421 ACCACTATGACAAGTAAAGCTGAAATAATCAATAAATTCCTAAAGGCAAGGTGGTGCTGGTCA-------------CTGACAGCTGCAGAAGTTGGGAAAGATCCACCATCTTGAAAAGTTTTTCCCCACAAACCCACTGGGGTCTCTCAAACAATT----AGTACACCAAGAGGGTCTGTATATGATACAGATCAGGGACAGCAGAACACTGGggaaatgaccaggtcttgaggg-gcaagccgttatgaatgggattgttgtctttatgaaagaagcccaatggagttcttgtgtgcctt-----ccataaaga-----agcccagtggagttctcgtgtgccctccactatgtgaggacatagaaagaaggcatcatctatcaaccatgaaatgggctcttgtgaaactctgaacttgtgggcatcttgatctgagactttacagccgcaagaagtgt-aaaaaagaaatatctgtggtttgttagtcagccagtttatattat i cebCap1.NW_016107540v1 C 0 I 215 s aotNan1.NW_018514471v1 7369098 482 + 9267652 ACCACTATGACAAGTAAAGCTGAAATAATCAATAAATTCCTAAAGGCAAGGTGGTGCTGGTCA-------------CTGTCAGCTGCAGAAGTTGGGAAAGATCCACCATCTTGAAAACTTTTTCCCCACAAACCCATTGGAGTCTCTCAAACAATTGATAAGTATGCCAAGAGAGTCTGTATATGATACAGATCAGGGACAGCAGAACACTGgggaaatgaccaggtcttgggga-gcaagcccttatgaatgggattagtgtctttatgaaagaagcccaatggagttcttgtgtgcctt----------ccataaagaagcccagtggagttctcatgtgccctcccctatgtgaggacatagaaagaaggcactatctatgaaccatgaaatgggctctcgtgaaactctgaacttgtgggcatcttgatctgagactttacagccatgagaagtgt-aaaaaagaaatatctgtcattttttaatcagccagtttatattat i aotNan1.NW_018514471v1 C 0 I 215 e canFam3.chr18 4070834 4772 + 55844845 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I a score=1167869.000000 s hg38.chr14_KI270725v1_random 103176 951 + 172810 tttgttataagaatccaaatagaccaagataTTCCACTTAATATGTAGGGGAAGGTAACAAAAACTGACACACCTAGAATACTCATGATGCTGGGAGTATGAAAACAGGA-----AAAACAAAACAAAACTGCTCTTGAAGGTGAAGGAGGAATAT-ACTGAGCTCACCAACACAGCCAGGAAAAG-AACAGAAGTGTGAGAAGTCTACATTCCTGAGATCCTGAGAAAAAGTACCTGCATAAGACTGAGATGAAATTACCTACCCTAGTtataattgaaatcccaaaaagaaaataggaaaaaatagtggagcaaaagaaatatttttcaaaataactgccaaaaatattctaaaagaa-gtgacagaaaatcaaatttcagatataggaaactcagagaatgtcaaatagaacaaaaataaataagaattacatcttggaaa-atcTTTAAAAAATCAACTCTAAATTTTATATcttgctccaaatatatagagatacaaataggttatcatcaagatatggagaaagccatatcat-ggaaacactaaaataaagctgtggaaggacgacattgatattagacacaacagagttcagaacaagaaatagtatcagagatgagagataatagataatataataatcaattctcaagaagatgtaaacatcctactaattagggtatgcagctaacaacagaacctccaaatacatgaggaaaaacatgaaagaaatcaaaggtgaactagaaaaatccaaaattatatttgcagacttcaaaacttttgtcttagtaagggacagactaggcacagactcagtaaccatatggaagataagaacaacaatatcaccaacaagacatccaatcTGCAATGGCAGATACTCTTTCCTTTCAAGTGAAAAAAAAA------CAGTATGGCATATTCTCTAACAAACCCAGAATTTCTAATGTTTGCGG s panTro5.chr7 52590587 952 + 166211670 tttgttataagagtccaaatagactgagataTTCCACTTAATATATAGGGGAAGGCAACAAAAACTGCCACACTTAGAATACTCCTGATGCTGGGAGTATGAAAACAGGA-----AAAACAAAACAAAACTACTCTCGAAGGTGAAGGAGGAATATCACTGAGCTCACCAACACAGCCAGGAAAAGGAACAGAAGTGTGAGAAGGCTATATTCCTGAGACCTTGAGAAAAAGTACCTGCATAAGACTGAGATGAAATTACCTACCCTAGTtataactgaaatcccaaaaagaaga--ggaaaaaataatggaatagaagaaatatttttcaaaataactgtcaaaaatattctaaaagaa-gtgacagaaaatcaaacttcagatataggaaactcagagaatgtcaaatagaacaaaAATAAGTAAGAATTACATCTTGAAAATATCTTTAAAAAATCAACTCTAAATTTTATATcttgctccaaatatatagagatataaataggttataatcaaggtatggagaaagccatatcat-ggaaacactaaaataaagctgtggaaggactacattgatattagacacaacagagttcagaacaagaaatattatcagagatgaaagataatatataatataataatcaattctcaagatgat-taaacatcctgctaattagggtatgcagcttacaacagaacctccaaatacatgaggtaaaacatgaaagaaatcaaaggtgatctagaaaaatccaaaattatatttgcagacttcaacacttttgtcttagtaatggacagactaggcacaaactcagtaatcgtatagaagacaagaacaacaatatcaccaa---gacatccaatcTTCAATGGCAGATACTCTTTCCTTTCAAGTGAAAAAAAAA--AAACCAGTATGGCATATTCTCTAACAAACCCAGAATTTCTAATATTTGCGG i panTro5.chr7 C 0 C 0 s panPan2.chr7 74650674 949 + 162613886 tttgttataagaatccaaatagaccaagataTTCCACTTAATATGTAGGGGAAGGTAACAAAAACTGACACACCTAGAACACTCCTGATGCTGGGAGTATGAAAACAGGA-----AAAACAAAACAAAACTGCTCTTGAAGGTGATGGAGGAATATCACTGAGCTCATCAACACAGCCAGGAAAAG-AACAGAAGTGTGAGAAGTCTACATTCCTGAGATCCTGAGGAAAAGTACCTGCATAAGACTGAGATGAAATTACCTACCCTAGTtataattgaaatcccaaaaagaaaagaggaaaaaataatggagcaaaagaaatatatttcaaaataactgccaaaaatattctaaaataa-gtgacagaaaatcaaacttcagatataggaaactcagagaatgtcaaatagaacaaaAATAAATAAGAATTACATCTTGGAAA-ATCTTT-AAAAATCAACTCTAAATTTTATATcttgctccaaatatatagagatataaataggctatcatcaagatatggagaaagccgtatcat-gtaaacactaaaataaatctgtggaaggactacattgatattagacacaccagagttcagaacaagaaatagtatcagagatgagagataatagataatataataatcaattctcaagaagatgtaaacatcctactaattagggtatgcagctaacaacagaaactccaaatacatgaggtaaaacatgaaagaaatcaaaggtgaactagaaaaatctaaaattatatttgcagacttcaaaacttttgtcttagtaagggacagactaggcacaaactcagaaatcatatggaagacaagaacaata--atcaccaacaagacatccaatcTTCAATGGCAGATACTCTTTCCTTTCAAGTGAAAAAAAAA------CAGTATGGCATAGTCTCTAACAAACCCAGAATTTCTAATGTTTGCCG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 83450 944 + 126596 tttgttataagagtccaaatagagcaaga-ATTCCACTTAATATGTAGGGGAAGGCAACAAAAACTGCCACAC-TAGAATACTCCTGATG-TGGGAGTATGAAAACAGGA-----AAAACAAAACAAAACTGCTCTTGAAGGTGAAGGAGGAATATCACTGAGCTCACCAACACAGCCAGGAAAAG-AACAGAAGTGAGAGAAGGCTACATTCCTGAGACCCTGAGAAAAAGTACCTGCA-AAGACTGAGATGAAATTACCTACTCTAGTTATGATTGAAATCCCAAAAAGAAAAGAGGGAAAAACAATGGAGCAAAAGAAATATTTTTCAAAATAACTGTCAAAAATATTCTAAAAGAA--TGACAGAAAATCAAACTTCAAATA-AGGAAACTCAGAGAATGTCAAATAGAACAAAAAGAAATAAGAATTACATC-TGAAAA-ATCTTTAAAAAATCAAGTCTAAATTTTATATCTAGctccaaatatatagagatataaataggttatcatcaagatatggagaaagccatatcataggaaacactaaaataaggc-gtggaaggactacattgatattagacacaacagagttcggagcaagaaatagtatcagagatgagagataatagataatagaataatcaattctcaagaagatgtaaacatcctactaattagggtatgtagctaacaacagaacctccaaatacatgaggtaaaacaggaaagaaatcaaaggtgaactagaaaaatc-aaaattatatttgcagacttcaacacttttgtcttagtaatggaaagactaagcacaaactcagtaatcatgtggaagataagaacaacaatatcaccaacaagacatccaatcTTCAATGGCAGATACTCTTTCCTTTCAAGTGAAAAAAAAA------AAGTATGGCATATTCTCTAACAAACCCAGAATTTCTAATATTTGCGT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5674720 957 + 72422247 ttcgttataagagtccaaatagaccaagGTATTCCACTTAATATGCAGGGGAAGGCAACAAAAACTGCCACACTTAGAATACTCCTGATGCTGGGAGTATGAAAACGGGA-----AAAGCAAAACAAAACTGCTCTTGAAGGTGAAGGAGGAATATCACTGAGCTCACTAACACAGCCAGGAAAAG-AACAGAAGTGTGAGAAGGCTACATTCCTGGGACTCTGAGAAAAAGCACCTGCATAAGACTGAgatgaaattacctaccctagttataattgaaatcccaaaaagaaaagaggaaaaaataatggag-aaaagaaatatttttcaaaataactgccaaaaacattctaaaagaa-gtgacagaaaatcaaacttcagatataggaaactcagagaatgtcaaatagaacaaaaataaataagaattacatcttgaaaa-atctttaaaaAATCAACTCTAAATTTTATATcttgctccaaatatatagagatataaataggttatcatcaagatatggagaaagccatatcat-ggaaacactgaaataaagctgtggaaggactacattgatattagacacaacagagttcagagcaagaaatagtatcagagatgagagataatagataatataataatcagttatcaagaagatgtaaacatcctactaatttgggtatgcagttaacaacagaacctccaaatatgtgaggtaaaacatgaaagaaatcaaaggtgaactagaaaaatccaaaattatatttgcagacttcaactcttttgtcttagtaatggacagactaggcagaaactcagtaatcatatggaagataagaacaacaatatcaccaacaagacatccaatcTTCAATGGTAGATACTGTTTCCTTTCAAGTGGAAAAAAAAAAAAACCAGTATGGCATATTCTCTAACAAACCTAGAACTTCTAATATTTGTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44113766 958 - 99891981 tttgttataagagtccaaatagaccaagacaTTCCACTTAATATGTAGGGGAAGGCAACAAAAACTGCCACACTTAGAATACTCCTGATGCTGGGAGTATGaaaacaggaaaaacaaaacaaaacaaaacTACTCCTGAAGGTGAAGGAGGAACATCACTGAGCTCACCAACACAGCCAGGAAAGG-AACAGAAGTGTGAGAAGGCTACATTCCTGAGACCCTGAGAAAAAGTACCCGCatgagactgagatgaaattacctaccctagttacaactgaaatcccaaaaagaaga--ggaaaaaataatggagcagaagaaatattttttaaaataactgtcaaaaatattataaaaaaaagtgacagaaaatcaaacttcagatacaggaaactcagagaatgtcaaatagaacaaaaatagataagaattacatcttgaaaatatctttaaaaaATCAACTCTAAATGTTATATcttgctccaaatatatagagatataaataggttataatcaaggtatggagaaagccatatcat-ggaaacactgaaataaagctgtggaaagactacattgatattagacacaacagagttcagaacaagaaatattatcagagatgagagataatatataatataataatcaattctcaagaagatgtaaacaccctactaattagagtatgcagctaacaacggaacttccaaatacatgaggtaaaacatgaaagaaatcaaaggtgaactagaaaaatccaaaattatatttgcagacttcaacacttttgtcttagtaatggacagactaggcacaaactcagtaatcatatagaagataagaacaacaatatcaccaacaagacatccaatcTTCAATGGCAGATACTCTTTCCTTTCAAGTGAAAAAAAAA--A---CAGTATGGCGTATTCTCTAACAAACCCAGAATTTCTAATATTTGCCG i nomLeu3.chr17 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e macFas5.chr3 124987125 1097 - 192294377 I e rheMac8.chr3 52341426 1577 + 185818997 I a score=95156.000000 s hg38.chr14_KI270725v1_random 104127 70 + 172810 Tcttccttccttctttccatcttccttt---ttctct-ttccttcccttgccttctt--ccttcctt--tcttctttt s panTro5.chr7 52591539 75 + 166211670 Tcttccttccttctttccatcttcctttctgttctct-tcccttcccttgccttctt--ccttccttctttttctctt i panTro5.chr7 C 0 C 0 s panPan2.chr7 74651623 63 + 162613886 Tcttccttccttctttccatcttccttt-----------ctcttcccctcccttctt--ccttcctt--tcttctttT i panPan2.chr7 C 0 M 854 s gorGor5.CYUI01000522v1 84394 71 + 126596 Tcttccttccttctttccatcttccttt---ctttctcttccttcccttgccttctt--ccttcctt--tcttctttt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5675677 73 + 72422247 TCttccttccttctttccatcttcctttctcttctct-tcccttcccttgccttctt--cctttctt--tcttctttt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44114724 73 - 99891981 TCttccttccttctttccatcttcctttctcttctct-tcccttcccttgccttctt--ccctcctt--tcttctttt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 124988222 73 - 192294377 tccttcttccttctttccttctttcctt--ccttcct-tctctttactttctttctttcccttcctt--tttccattc i macFas5.chr3 I 1097 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e rheMac8.chr3 52341426 1577 + 185818997 I a score=158850.000000 s hg38.chr14_KI270725v1_random 104197 254 + 172810 cctcttcc-------ttttcttttcttttcctttttct--------ttttttctccttccttc-----------cttctttgcttccttctttctttcctctgat-tcttccttccctcctccctcccttcctttct-ccctcccttcttttcttccttcttttctctta---ttctttctttctcacttccttgctttctttctttttt------ctcccgtcctccctccctccttttcttccttcctccctcccttcctttcctcatttttccttcctt--ccttccttc s panTro5.chr7 52591614 283 + 166211670 tcttttctgttctt-ttttcttttctttttctttttctcttctttcttttttctccttccttctttcattctttcctcttttcttcctttcttccttcc-ctcatacctcccttcctttcttcctcccttcctttct-ccctcccttcccttctccctccctttctctctct-ttctttctttcccactttcttgctttctttcctttttttctttctcccttcctccctccctccttttcttcctccctccctcccttccttcc------tttcctccttttcccttccttc i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 84465 255 + 126596 cctcttcctttct--tttctttttcttttcctttcttcttttctttctttttctccttccttc-----------cttctttccttctttctttctttcc-cttat-tcttcc-tccctcctccctcccttcctttct-ccctccatt---ttcttccttcttttctcatattctttcttctttctcacgttcttgctttctttccttttt-----tctcccttcctcccg-cctcattttcttccttgctccctcccttcc----------tttcctctttt--ccttccttc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5675750 262 + 72422247 cctctttcttttct-tttccttttccttttcctctttcttttcttcttttttctccttccttc-------------------tttccttctttctttcctctgat-tcttccttccctcctccctcccttccttTCtcccctcccttcttttcttccttcnnnnnnnnnn---ttctttctttctcactttcttgctttctttccttttt-----tcttccttcctccctccctccttttcttccttcctccctcccttccctcctttttccttccttcctt--acttccttc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44114797 211 - 99891981 cttctttct------tttcctttcctttttcttttttcttttcttttcttttct--ttctttc----------tcttcttttctttcttttttct-----------ccttccttccttctttccttccttctttcct-cttattcttcctttcttcct---------------tcccttatccctcccttcctt---------------------tctgcctccctttctccctccctttctctctctctctctctttctc----------tttctttcttt--ctttc---- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 124988295 273 - 192294377 tctcttcctcctttccttccttccttcctcccttctttctttctttctttttttcttgctttc----tggtgttcttgctttctttttttctcccttcctgcctt-tctcttttcctccctccctcccttccttcattttctccttttctttcttctttttctttcc------ttcattctttcccactttcttgctttctttccttttt-----tctttctcccttcctccctccttttcttccttcttccctcccttcctttccttt--cttccttcctt--ccttccttc i macFas5.chr3 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e rheMac8.chr3 52341426 1577 + 185818997 I e panPan2.chr7 74651686 854 + 162613886 M a score=22516.000000 s hg38.chr14_KI270725v1_random 104451 37 + 172810 cttttcctctttattttcttt----ctttgccttcctcctt s panTro5.chr7 52591897 41 + 166211670 cttctcctctttattttctttgtttctttaccttcctccct i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 84720 41 + 126596 ctttgcctctttattttctttgtttctttgccttcctccct i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676012 41 + 72422247 cttcTCCTCTTTATTTTCTTTGTTTCTTTGCCTTCCTCCCT i ponAbe2.chrUn C 0 C 0 s macFas5.chr3 124988568 33 - 192294377 --------ccttttttccttccttccttcccttttttcctt i macFas5.chr3 C 0 C 0 e canFam3.chr18 4070834 4772 + 55844845 I e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44115008 0 - 99891981 C e panPan2.chr7 74651686 854 + 162613886 M a score=49269.000000 s hg38.chr14_KI270725v1_random 104488 108 + 172810 tttaccgttctctcttcctcctttccttcctct----cttcttcct----------ttctttctttctctctttctctctctgtctctttctttccctttctttctttctttctttctttct s panTro5.chr7 52591938 54 + 166211670 ttttccattctctcctcctcctttccttcctcc----cttcctcct----------ttcttgcttgct------------------------------------------------------ i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 84761 85 + 126596 tttaccattctctcttcctcctttccttcctcc----cttcctcct----------ttctttctttctctctt-----------------------ctctctttctttctttctttctttct i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676053 96 + 72422247 TTTACCATTTtctcttcctcctttcctccctcc----cttcctcct----------tcctttctttctttctc------------actttctttctctttctttctttctttttttctttct i ponAbe2.chrUn C 0 C 0 s macFas5.chr3 124988601 94 - 192294377 ccttccttccttccttccttccttccttccttc----cttc-tctt----------tactttttttcccttcc-------------cccctttttccattctctcttcctccttttcttcct i macFas5.chr3 C 0 I 3 s canFam3.chr18 4075606 110 + 55844845 TTTGTCATctcctcctcctcctcctcttcctcctcctcttcctcctcctcctcctcttctttcttcttcttct------------tcttcttcttcttcttcttcttcttcttcttcttctt i canFam3.chr18 I 4772 C 0 e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e colAng1.NW_012115910v1 5174982 1596 - 6934359 I e manLeu1.NW_012105809v1 616877 1535 + 1799296 I e chlSab2.chr21 121507777 1473 - 127223203 I e cerAty1.NW_012000909v1 7567631 1609 - 10077455 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e rheMac8.chr3 52341426 1577 + 185818997 I e nomLeu3.chr17 44115008 0 - 99891981 C e panPan2.chr7 74651686 854 + 162613886 M a score=399744.000000 s hg38.chr14_KI270725v1_random 104596 164 + 172810 -ttctttctttctttctttcttgtgttctttctttc--ttttttctcccttcctgcctttctcccttc------------ctccctccctcccttccttccttctctcatttcctccctct---tttcttt------------------cttctttctttc----tttccttc--------cttccttctttcc---ttcc----ttctttt----tactttc s panTro5.chr7 52591992 168 + 166211670 -tgcttgcttgcttgctttctggtgttcttgctttc--ttttttctcccttcctgcctttctcccttc------------ctccctccctcccttccttccttctctcatttcctccttct---tttattt------------------cttctttctttc----cttccttc--------cttccttctttcc---ttcc----ttcttttctctttctttc i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 84846 165 + 126596 -ttccttctt-ctttctttcttgtattcatgctttc--ttttttctcccttcctgcctttctcccttc------------ctccctccctcccttccttcc----ctcatttcctccttctttctttcttt------------------cttctttctttctttatttccttc--------cttccttctttcc---ttcc----ttcttt-----ttctttc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676149 143 + 72422247 -ttctttttt-atttctttcttgtgttcttgctttc--ttttttctcccttcctgcctttctcccttc------------ctccctccctcccttccttccttctctcatttcctccttct--------tt------------------cttctttctttc----cttccttc--------cttccttcttt-----ttac----t----------------- i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343003 132 + 185818997 -ttcttgctttcttgctttctggtgttcttgctttcttttttttctcccttcctgcttttctcccttc------------cttcctccctcccttctttccttctctcattttctccttct---tttcttt--------------------------------------------------tttctttctttct---tttc---------------------- i rheMac8.chr3 I 1577 C 0 s macFas5.chr3 124988698 130 - 192294377 -ttcttgctttcttgctttctggtgttcttgctttcttttttttctcccttcctgcttttctcccttc------------cttcctccctcccttctttccttctctcattttctccttct---tttcttt--------------------------------------------------tttctttctttct---tt------------------------ i macFas5.chr3 I 3 C 0 s cerAty1.NW_012000909v1 7569240 131 - 10077455 -ttcttgctttcttgctttctggtgttcttgctttc-tttttttctcccttcctgcttttctcccttc------------cttcctccctcccttctttccttctctcattttctccttct---tttcttt--------------------------------------------------tttctttctttct---tttc---------------------- i cerAty1.NW_012000909v1 I 1609 C 0 s chlSab2.chr21 121509250 192 - 127223203 -ttcttgctttcttgctttctggtgttcttgctttc-tttttttctcccttcctgcttttctcccttccttcctccctctcttcctccctctcttccttccttcTCTCATTTTCTCctttc---tttctttcttttctttctttctttctttctttctttc----tttctttctttctttctttctttctttctttctttc---------------------- i chlSab2.chr21 I 1473 C 0 s manLeu1.NW_012105809v1 618412 131 + 1799296 -ttcttgctttcttgctttctggtgttcttgctttc-tttttttctcccttcctgcttttctcccttc------------cttcctccctcccttctttccttctctcattttctccttct---tttcttt--------------------------------------------------tttctttctttct---tttc---------------------- i manLeu1.NW_012105809v1 I 1535 C 0 s colAng1.NW_012115910v1 5176578 162 - 6934359 -ttcttgctttcttgctttctggtgttcttgctttc-tttttttctcccttcctgcttttctcccttc------------cttcctccttcccttccttgcttctctcattttctccttct---tttcttc------------------tttctttcttcc----tttcttcttttcttc-tttctttcttttt---tttctttc------------------ i colAng1.NW_012115910v1 I 1596 C 0 s canFam3.chr18 4075716 148 + 55844845 cttcttcttcttcttcttcttcttcttcttcttttc-ttcttcttcttcttcttcttcttcttctttc------------ttcttcttctccttttcttcttttcctcctcttcttcctct---tcctctt--------------------cctcccctcc----tctcca----------tctcctcctccac---cttc---------------------- i canFam3.chr18 C 0 C 0 e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e macNem1.NW_012011522v1 334387 1723 - 3123512 I e nomLeu3.chr17 44115008 0 - 99891981 C e panPan2.chr7 74651686 854 + 162613886 M a score=3276.000000 s hg38.chr14_KI270725v1_random 104760 1 + 172810 t s panTro5.chr7 52592160 1 + 166211670 t i panTro5.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85011 1 + 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s macNem1.NW_012011522v1 336110 1 - 3123512 t i macNem1.NW_012011522v1 I 1723 C 0 s cerAty1.NW_012000909v1 7569371 1 - 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509442 1 - 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618543 1 + 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5176740 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 4075864 1 + 55844845 t i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 5676292 0 + 72422247 C e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e macFas5.chr3 124988828 0 - 192294377 C e rheMac8.chr3 52343135 0 + 185818997 C e nomLeu3.chr17 44115008 0 - 99891981 C e panPan2.chr7 74651686 854 + 162613886 M a score=10748.000000 s hg38.chr14_KI270725v1_random 104761 3 + 172810 ttc s panTro5.chr7 52592161 3 + 166211670 ttc i panTro5.chr7 C 0 C 0 s panPan2.chr7 74652542 3 + 162613886 TTN i panPan2.chr7 M 854 C 0 s gorGor5.CYUI01000522v1 85012 3 + 126596 ttg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676292 3 + 72422247 ttc i ponAbe2.chrUn C 0 C 0 s macFas5.chr3 124988828 2 - 192294377 -tc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336111 3 - 3123512 ttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569372 3 - 10077455 ttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509443 3 - 127223203 ttc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618544 3 + 1799296 ttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5176741 3 - 6934359 ttc i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 4075865 3 + 55844845 TTT i canFam3.chr18 C 0 C 0 e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e rheMac8.chr3 52343135 0 + 185818997 C e nomLeu3.chr17 44115008 0 - 99891981 C a score=51851.000000 s hg38.chr14_KI270725v1_random 104764 10 + 172810 ttttcttttc s panTro5.chr7 52592164 10 + 166211670 ttttcttttc i panTro5.chr7 C 0 C 0 s panPan2.chr7 74652545 10 + 162613886 TNTTCTTTTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85015 10 + 126596 ttttcttttc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676295 10 + 72422247 ttttcttttc i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343135 10 + 185818997 tttctttttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124988830 10 - 192294377 tttctttttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336114 10 - 3123512 tttctttttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569375 10 - 10077455 tttctttttc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509446 10 - 127223203 tttctttctc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618547 10 + 1799296 tttctttttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5176744 10 - 6934359 tttctttttc i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 1579473 10 - 14340318 TTTACCTTCt i otoGar3.GL873564 N 0 C 0 e canFam3.chr18 4075868 0 + 55844845 C e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e nomLeu3.chr17 44115008 0 - 99891981 C a score=2080381.000000 s hg38.chr14_KI270725v1_random 104774 325 + 172810 tttctttctC------------TTT--------ACCAC-AATTCATATTATTTAAAAAAA----TT-------AATACAGGGAGG-----AAGAAAAATAAAGAACATTTTAATCTGCATGTAAATAGA-TTATGTCT----GCTgt---ag--acaaaaggatgacctcccaaaaatgttcatgtcctaattaccagaatctaacatacaaat-----aggttacatggcagt-ggaaaactag-atttcaagtgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatattaaatggtggggatcaatgaaatcacaagattccttataagtgaaagaagaaggcagaagaaaggcaaccatggag-gtggtggcat s panTro5.chr7 52592174 331 + 166211670 tttctttctc------------ttT--------ACTAC-AATTCATATTATTTAAAAAAA---ATT-------AAGAGAGAGAGG-----CAGAAAAATAAAGAACACTTTAATCTGCAGGTAAATAGA-TTATGTCT----GCTgt---ag--acagaataatggcctcccaaaaatgttcatgtcctaattcccagagtctaacatacaaatgtgttaggttgcatggcagt-gggaaattag-atttcaagtgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgaaatcacaagctttcttataagtgaaagaagaaggcagaagaaagacaaacatggag-gtggtagcat i panTro5.chr7 C 0 C 0 s panPan2.chr7 74652555 329 + 162613886 TTTCTTTCTC------------TTT--------ACTAC-AATTCATATTATTTAAAAAA-----TT-------AAGACACGGAGG-----AAGAAAAATAAAGAACACTTTAATCTGCAGGTAAATAGA-TTATGTCT----GCTgt---ag--acaaaaggatgccctcccaaaaacgttcatgtcctaattcccagagtctaacatacaaacatgttgggttacatggcagt-ggaaaattag-atttcaagtgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatggatgggatcaatgaaatcacaagcttccttataagtgaaagaagaaggcagaagaaaggcaaccatggag-gtggtggcat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85025 328 + 126596 tttctttctc------------ttt--------ACTAC-GATTCATATTATTTTTAAAAA---ATT-------AAGAGAGGGAGA-----GAGAAAAATAAAGAATGCTTTAATCTG-AGGTAAACAGA-TTATGTCT----GCTgt---ag--gccaaagaatggcctcccaaaaattttcatgtcctaattcccagagtctaacatacaaatatgttaggttgca-ggcagt-gtgaaattag-atttcaagtgaaattaaggtt-----gt-ggaaaaat--------gata-gag-agattgtcttaaatgggtgggatcaatgaaatcacaaacttcattataagtgaaagaagaaggc-gaagaaaggcaaccttggag-gtggtggcat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676305 331 + 72422247 tttctttctc------------ttt--------actAC-AATTCATATTATTCTAAAAAA---ATT-------AAGAGATGGAGG-----CAGAAAAATAAAGAACACTTCAATCTGCGGGTAAATAGA-TTATGTCT----GCTgt---ag--acaaaagaatgcctccccaaaactgttcatgtcctaattcccagagtctaacatacaagtatgttaggttgcatggcagt-gggaaattag-atttcaagtgaaattgaggtt-----gc-aataaaat--------gttg-gag-agattatcttaagtgggtgggatcaatgaaatcacaagcttccttataagtgaaagaaggcggcagaagaaaggcaaccatggag-gtggtggcat i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343145 331 + 185818997 tttctttctc------------ttt--------ACTAC-AATCCATATTATTTTTAAAAA---ATT-------AAGAGAGGGAAG-----CAGAAAAATAAAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----GCTgt---ag--gcgaaataatggcctcccaaaaatgttcatgtcctaattcccagagcctaacatacaaatatgttaggttgcatggcagt-aggaaattag-atttcaaatgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgtaatcacaagcttccttgtaagtgaaagaaggaggcagaagaaagataaccatggag-gtggcggcgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124988840 331 - 192294377 tttctttctc------------ttt--------ACTAC-AATCCATATTATTTTTAAAAA---ATT-------AAGAGAGGGAAG-----CAGAAAAATAAAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----GCTgt---ag--gcaaaataatggcctcccaaaaatgttcatgtcctaattcccagagcctaacatacaaatatgttaggttgcatggcagt-aggaaattag-atttcaaatgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgtaatcacaagcttccttgtaagtgaaagaaggaggcagaagaaagataaccatggag-gtggcggcgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336124 330 - 3123512 tttctttctc------------ttt--------ACTAC-AATCCATATTATTTTT-AAAA---ATT-------AAGAGAGGGAAG-----CAGAAAAATAAAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----GCTgt---ag--gcgaaataatggcctcccaaaaatgttcatgtcctaattcccagagcctaacatacaaatatgttaggttgcatggcagt-aggaaattag-atttcaaatgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgtaatcacaagcttccttgtaagtgaaagaaggaggcagaagaaagataaccatggag-gtggcggcgt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569385 331 - 10077455 tttctttctC------------TTT--------ACTAC-AATCCATATTATTTTTAAAAA---ATT-------AAGAGAGGGAAG-----CAGGAAAATAAAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----ACTgt---ag--gcgaaataatggcctctcaaaaatgttcatgtcctaattcccagagcctaacatacaaatatgttaggttgcatggcagt-aggaaattag-atttcaaatgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgtaatcacaagcttccttgtaagtgaaagaaggaggcagaagaaagataaccatggag-gtggcggcgt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509456 331 - 127223203 tttctttctC------------TTT--------ACTAC-ATTCCATATTATTTTTAAAAA---ATT-------AAAAGAGGGAAG-----CAGAAAAATAAAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----GCTAt---ag--gcgaaataatggcctcccaaaaatgttcaggtcctaattcccagagcctaacatacaaatatgttaggttgcatggcagt-aggaaattag-atttcaaaagaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgtaatcacaagcttccttataagtgagaggaggaggcagaagaaagataaccatggag-gtggcggcgt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618557 331 + 1799296 tttctttctC------------TTT--------ACTAC-AATCTATATTATTTTTAAAAA---ATT-------AAGAGAGGGAAG-----CAGAAAAATAAAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----GCTgt---ag--gcgaaataatggcctcccaaaaatgtccatgtcctaattcccagagcctaacatacaaatatgttaggttgcatggcagt-aggaaattag-atttcaaatgaaattaaggtt-----gc-aataaaat--------gatg-gag-atattatcttaaatgggtgggctcaatgtaatcacaagcttccttgtaagtgaaagaaggaggcagaagaaagataaccatggag-gtggcggcgt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5176754 331 - 6934359 cttctttctc------------ttT--------ACTAC-AATCCATATTATTTTAAAAAA---ATT-------AAGAGAGGGAAG-----CAGAAAAATAGAGAATATTTTAATCTGCAGGTAAATAGA-TTTTGTCT----GCCgt---ag--gtgaaataatggcctcccaaaaatgttcatgtcctaattcacacagcctagcatacaaatatgttaggttgcatggcagt-atgaaattag-atttcaaatgaaattaaggtt-----gc-aataaaat--------gatg-gag-agattatcttaaatgggtgggctcaatgtaatcacaagcttccttataagtgaaagaaggaggcagaagaaagataaccatggag-gtggtggcat i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 1579483 351 - 14340318 tttttttttt------------tttaaaaaaaaaagac-taattgtattattttgaaatt---gtt-ttataaaataGTGGGAGG-----CAGGAAAACCAAGAACATTTTAATCTATACGTAAATATA-TTATGTTTA---AAtgt---agaaggaaaataaaggcatcccagaaatgtccatgtactaa--cccagaatc-----tataaatatattagattacatggcagtgaggggattag-atagcaactgaaattaaggtt-----gctaatcaaatgaacctaagatg-gggcaggttatccggtgtgggtgagcccagtgtagtcgcaagcttctttataagtagtagaggcaggcagaagggagagaa-cacagag-atggtggcat i otoGar3.GL873564 C 0 I 11 s canFam3.chr18 4075868 323 + 55844845 ---------T------------TCT--------ACCACTAATCTATATTATGTCCAAAGATCTTTT-------AGGAAATGGTGGAGTACAGAAAAAACAAAGATCGTTTTAATCTATAGGTAAATAGACTTATGTCTA---ACtatggaag--agaaagtaatggcacctttaaaatgcccaggtcctaatcttcagaacctgg-----agctatgttagcttacatggtagt-gggaatttag-actgtaaatggagttaaaatttctgagc-aatcgact----ct--gatatggg-agatggacctggaagggtgaatccaatgtgatcac------------aagtgaagggag-----acaggagagggaactgcaaaacatgaccacat i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 242129 349 - 1446996 TTTCTTCCTCAGTCCAATCTGTTTT--------AAAAC-AAGTTTTGTCATTTTGGAAAA---TCCTTTGGGAAATAGTGGGAGC-----CAGAAGAATAAAGAGTATTTCAAACTATTGGTAAATAGACTTCTGTTTAACCAtggt---ag--gcaaactaatggtaccacaaaggtttttatgtcctaatccttagaacc-----tgtgaataggttagatcacttggcaag-ggggaatcaatggtgcagatggaattaaattt-----gctaatcagctggccttgagatg-ggg-agatta--ctggatgg-tggacccaagattgacat-agtggtcttttaagtggaataaggaggcagaagagagaaag-------a-atggcaacat i dasNov3.JH578441 N 0 C 0 e saiBol1.JH378145 17635217 215 + 18371965 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e nomLeu3.chr17 44115008 0 - 99891981 C a score=81419.000000 s hg38.chr14_KI270725v1_random 105099 15 + 172810 gagaaa----ttactcaac s panTro5.chr7 52592505 15 + 166211670 gagaaa----taactcaac i panTro5.chr7 C 0 C 0 s panPan2.chr7 74652884 15 + 162613886 gagaaa----ttactcaac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85353 15 + 126596 gagaaa----ttactcaac i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676636 15 + 72422247 gtgaaa----ttactcagt i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343476 15 + 185818997 gaggaa----taactcaac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989171 15 - 192294377 gaggaa----taactcaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336454 15 - 3123512 gaggaa----taactcaac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569716 15 - 10077455 gaggaa----taactcaac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509787 15 - 127223203 gagaaa----taactcaac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618888 15 + 1799296 gaggaa----taactcaac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177085 15 - 6934359 gagaaa----taactcaac i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 4076191 14 + 55844845 gagaga----t-acttggc i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 242478 19 - 1446996 gagaaacatgtggcctggc i dasNov3.JH578441 C 0 C 0 e saiBol1.JH378145 17635217 215 + 18371965 I e otoGar3.GL873564 1579834 11 - 14340318 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e nomLeu3.chr17 44115008 0 - 99891981 C a score=81073.000000 s hg38.chr14_KI270725v1_random 105114 13 + 172810 atcactgactttt s panTro5.chr7 52592520 13 + 166211670 atcactgactttt i panTro5.chr7 C 0 C 0 s panPan2.chr7 74652899 13 + 162613886 atcactgactttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85368 13 + 126596 atcactgactttt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676651 13 + 72422247 gtcactgactttt i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343491 13 + 185818997 atcgctgactttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989186 13 - 192294377 atcgctgactttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336469 13 - 3123512 atcgctgactttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569731 13 - 10077455 attgctgactttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509802 13 - 127223203 atcgctgactttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618903 13 + 1799296 atcgctgactttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177100 13 - 6934359 atccctgactttt i colAng1.NW_012115910v1 C 0 C 0 s dasNov3.JH578441 242497 13 - 1446996 attgttgactttc i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4076205 0 + 55844845 C e saiBol1.JH378145 17635217 215 + 18371965 I e otoGar3.GL873564 1579834 11 - 14340318 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e nomLeu3.chr17 44115008 0 - 99891981 C a score=573264.000000 s hg38.chr14_KI270725v1_random 105127 108 + 172810 aagatacaagaatgaggacccagtgcggtggctcacgcctaatcccagccctttgggaggccgccggggtgggtggatcacgaggtcaggagttcgagaacatcctgg s panTro5.chr7 52592533 105 + 166211670 aagatataagaatgaggacccagcgcggtggctcacacctaatcccagcactttgggaggccg---gggtgggtggatcatgaggtcaggagatcgagaccaacctgg i panTro5.chr7 C 0 C 0 s panPan2.chr7 74652912 105 + 162613886 aagatgcaagaatgaggacccagcgcggtggctcacgcctaatcccagccctctgggaggcca---gagttggtggatcacgaggtcaggagatcgagaccatcctgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85381 105 + 126596 aagatacaagaatgaggacccagcgtggtggctcatgcctaatcccagcactttgggaggctg---gggtgggtttatcacgaggtcaggagatcgagaccatcctgg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676664 105 + 72422247 aagatacaagaatgaggacccagcgcggtggctcacgcctaatcccagcactttgggaggccg---gggtgggtggatcacgaggtcaggagatcgagaccatcctgg i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343504 105 + 185818997 aagatgtaagaatgaggacctggcgtggtggctcacacctaatcccagcactttgggagtccg---gggtgggtgaatcatgaggccaggagatcgagaccatcctgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989199 105 - 192294377 aagatgtaagaatgaggacctggcgtggtggctcacacctaatcccagcactttgggagtccg---gggtgggtgaatcatgaggccaggagaccgagaccatcctgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336482 105 - 3123512 aagatgtaagaatgaggacctggcgtggtggctcacacctaatcccagcactttgggagtccg---gggtgggtgaatcatgaggccaggagatcgagaccatcctgg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569744 105 - 10077455 aagatgtaagaatgaggacctggcgtggtggctcacacctaatcccagcactttgggagtccg---gggtgggtgaatcatgaggccaggtgatcgagaccatcctgg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509815 105 - 127223203 aagatataagaatgaggacctggcgtggtggctcacacctaatcccagctctttgggagtccg---aggtgggtgattcatgaggccaggagatcgagaccatcctgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 618916 105 + 1799296 aagatgtaagaatgaggacctggtgtggtggctcacacctaatcccagcactttgggagtccg---gggtgggtgaatcatgaggccaggagatcgagaccatcctgg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177113 104 - 6934359 aagatataagaatgaggacctggcgtggtggctcacacctaatcccagcactttgggagtccg----ggtgggtgaatcacgaggccaggagatcgagaccatcctgg i colAng1.NW_012115910v1 C 0 C 0 e dasNov3.JH578441 242510 0 - 1446996 C e canFam3.chr18 4076205 0 + 55844845 C e saiBol1.JH378145 17635217 215 + 18371965 I e otoGar3.GL873564 1579834 11 - 14340318 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e nomLeu3.chr17 44115008 0 - 99891981 C a score=908388.000000 s hg38.chr14_KI270725v1_random 105235 202 + 172810 ctaacatggtgaaaccccatccctactaaaggtacaaaaaattaactgggcatggtgtcacgtgcctgtagtc----caagctactcaggaagctgaggcaggagaatcgcttgaacccgggagacagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagaaggagact------ctatctc---aaaaaaaaaaaa s panTro5.chr7 52592638 202 + 166211670 ctaacatggtgaaaccccatctctactaaaaatacaaaaaattagctgggtgtggtggcacgtgtctgtagtc----caagctactcaggaagctaagggaggagaattgcttgaacccgggaggcggaggttgcagtgagctgagatcacgccactgcactccagcctgggtgacagaacaagact------ccatctc---aaaaaaaaaaaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 74653017 202 + 162613886 ctaacatggtgaaaccccatccctactaaaagtacaaaaaattaaccaggcatggtggcacgtgcctgtagtc----caagctactctggaagctgaggcaggagaattgcttgaacctgggagacagaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagaaggagact------ctatcta---caaaaaaaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85486 200 + 126596 ctaacatggtgaaaccccatccctactaaaaatacaaaaaattaactgggcgtggtggcaagtgcctgtagtc----caagctactcaggaagctgagg-agaagaatcacttgtacccgggaggcagaggttgcagtgagctgagatcatgccactgcactccagcc-gggtgacagaaggagact------ccatctc---aaaaaaaaaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676769 202 + 72422247 ctaacatggtgaaaccccacccctactaaaaatacaaaaaattaactggacatggtggtacgtgcctttagtc----caagctactcaggaagctgaggcaggagaatcgcttgaaccccggaggcagaggttgcagtgagctgagatcgtgccactgcactccagcctgggtgacagaaggagact------ccatctc---aaaaaaaaaaaa i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343609 207 + 185818997 ctaacatggtgaaaccccgtctctactaaaaatacaaaacattagctgggcatggtagcgggtgcctgtagtccaagcaagctactcaggaggctgaggcaggagaatcacttggacctgggagacggaagttgcgatgagctgagattgcgccactgcactccagtctgggtgacagagcgagact------ccgtcac--aaaaaaaaaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989304 209 - 192294377 ctaacatggtgaaaccccgtctctactaaaagtacaaaacattagctgggcatggtagcgggtgcctgtagtccaagcaagctactcaggaggctgaggcaggagaatcacttggacctgggagacggaagttgcgatgagctgagattgcgccactgcactccagtctgggtgacagagcgagact------ccgtcacaaaaaaaaaaaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336587 202 - 3123512 ctaacatggtgaaaccccgtctctactaaaattacaaaacattagctgggcatggtagcaggtgcctgtagtccaagcaagctactcaggaggctgaggcaggagaatcacttggacctgggagacggaagttgcgatgagctgagattgcgccactgcactccagtctgggtgacagagcg----t------ccgtcac---aaaaaaaaaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7569849 206 - 10077455 ctaacatggtgaaaccccgtctctactaaaaatacaaaacattagctgggcatggtagcgggtgcctgtagtccaagcaagctactcaggaggctgaggcaggggaatcacttggacctgagagacggaagttgcgatgagctgagattgcgccactgcactccagtctgggtgacagagcgagact------caaaaaa---aaaaaaaaaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121509920 196 - 127223203 ctaatatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcgtggtagcgggtgcctgtagtc----caagctactcaggaggctgaggcagaagaatcacttgaacctgggagacggaggttgcgatgagctgagattgcgcca------------ctgggtgacagagcgagacgtcgtctcaaaaaa---aaaaaaaaaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 619021 206 + 1799296 ctaacatggtgaaaccccgtctctactaaaaatacaaaacattagctgggcatggtcgcgggtgcctgtagtccaagcaagctactcaggaggctgaggcaggagaatcacttggacctgggagacggaagttgcgatgagctgagattgcgccactgcactccagcctgggtgacagagcaaaaaa------aaaaaaa---aaaaaaaaaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177217 208 - 6934359 ctaacatggtgaaaccccgtctctaataaaaataccaaaaattagctgggcgtggtagcgggtgcctgtagtc----caagctactcaggaggctgaggcaggagaatcacttgaacctgggagacggaggttgctatgagctgagattgcgccgctgcactccagtctgggtgacagagcgagactccgtctcaaaaaa---aaaaaagaaaaa i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 4076205 24 + 55844845 ccaacatgg-------------------------------------------------------------------------------------------------atgacttttacacgg---------------------------------------------------------------------------------------------- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 242510 0 - 1446996 C e saiBol1.JH378145 17635217 215 + 18371965 I e otoGar3.GL873564 1579834 11 - 14340318 I e aotNan1.NW_018514471v1 7369580 215 + 9267652 I e cebCap1.NW_016107540v1 2170246 215 - 3566421 I e calJac3.chr8 20049898 216 + 128169293 I e nomLeu3.chr17 44115008 0 - 99891981 C a score=168076.000000 s hg38.chr14_KI270725v1_random 105437 18 + 172810 aa-----------------gatataagaacgaggt s panTro5.chr7 52592840 35 + 166211670 aaaaaaaaaaaaaaggtaagatgtaagaatgaggc i panTro5.chr7 C 0 C 0 s panPan2.chr7 74653219 21 + 162613886 aaaaa--------------gatataagaatgaggt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85686 27 + 126596 aagaaaaatag--------gatctaagaatgaggt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676971 25 + 72422247 aaaaaaaaa----------gatataagaatgaggt i ponAbe2.chrUn C 0 C 0 s rheMac8.chr3 52343816 26 + 185818997 aaaaaaagaa---------gatgtaagaatgaggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989513 26 - 192294377 aaaaaaaaaa---------gatgaaagaatgaggc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336789 26 - 3123512 aaaaaaagaa---------gatgtaagaatgaggc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7570055 26 - 10077455 agaagaagaa---------gatgtaagaatgaggc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121510116 26 - 127223203 aaaaagaaaa---------gatgtaagaatgaggc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 619227 26 + 1799296 aaaaaaagaa---------gacgtaagaatgaggc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177425 26 - 6934359 aaaaaaagaa---------gatgtaagaatgaggc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20050114 18 + 128169293 --------aa---------gatgtaagaatgaggc i calJac3.chr8 I 216 C 0 s saiBol1.JH378145 17635432 18 + 18371965 --------aa---------gatgtaagattgaggc i saiBol1.JH378145 I 215 C 0 s cebCap1.NW_016107540v1 2170461 18 - 3566421 --------aa---------gatgtaagaatggggc i cebCap1.NW_016107540v1 I 215 C 0 s aotNan1.NW_018514471v1 7369795 18 + 9267652 --------aa---------gatgtaagaatgaggc i aotNan1.NW_018514471v1 I 215 C 0 s otoGar3.GL873564 1579845 18 - 14340318 --------aa---------gatgggagagagaggc i otoGar3.GL873564 I 11 C 0 s canFam3.chr18 4076229 11 + 55844845 ------------------------aagagtgaagc i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 242510 18 - 1446996 --------aa---------gttaaaggaatgtggc i dasNov3.JH578441 C 0 C 0 e nomLeu3.chr17 44115008 0 - 99891981 C a score=4279555.000000 s hg38.chr14_KI270725v1_random 105455 349 + 172810 catgttccaagaaataaaggtggcctctgcatgctgaaaaaaataaagtacatagactcttcca-cagagcc-ctcagaaagactgcagccctgcccaaaacttgatgttagccctgtgagtctcatttaaggcttctgaactccagaactgtaggctta------a-cagtcactttattgtaagatatgtatttcgtgataatttgttacagcagcaagaggaaTTTTATATAGTAATTGTATCATGAAAATGAGAACCATAATTGACAACTGCTTTTAATACTGCA-----------------CTTGGATGTTTGAAATCACGTACATGGAAATG-ATCTC----T------ATGTGT--ATGAGGGAGGATAGCAAATTGATGC s panTro5.chr7 52592875 366 + 166211670 catgttccaacgaataaaggtggcttctggattctgaaaaaaatcaagtacatagattccgcca-catagcc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgagtctgatttaaggcttctgaactccagaactgtaggatta------a-cggtcactttattgtaagatatgaagtttgtggtaattggttacagcagcaagaggaagtttatataGTAATTGTATCATGAAAATGAGAACCATAATTTACAACTGCTTTTAATACTATAACCTTCCCGTCTTCTTGCTTGGATGTTTGAAATCTTGTACATGGATATG-ATCTC----T------GTGTGT--ATGAAAGAGGACAGCAAATTGTTGC i panTro5.chr7 C 0 C 0 s panPan2.chr7 74653240 349 + 162613886 catgttccaaggaataaaggtggcctcggcatgctgaaaaaaataaagtacatagactctgcca-cagagcc-ctcagaaagactgcagccctgcccaaaacttgatgttagccctgtgggtctcatttaaggcttctgaactccagaactgtaggctta------a-ccgtcactttattgtaagatataaatttcatgataatttgttacagcagcaagaagaaGTTTGTATAGTAATTGTATCATGAAAATGAGAACCATAATTTACAACTGCTTTTAATACTGCA-----------------CTTGGATGTTTGAAATCAAGTACATGGAAATG-ATCTC----T------ATGTGT--ATGAGGGAGGATAGCAAATTGATGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 85713 347 + 126596 catgttccaaggaataaaggtggcctctggatgctgaaaaaaatcaagta-atagattctgcca-catagcc-ctcagaaagactgcagccctgcccaaaacttgatgttagccctgtgagtttcatttaaggcttctgaactacagaactgtaggatta------a-cggtcactttattgtaagatatgaagtttgtggtaattggttacagcagcaagaggaagtttataTTGTAATTGTATCATGAAAATGAGAACCATAATTTACAACTGCTTTTGATACTGCA-----------------CTTGGATGTTTGAAATCACGT-CATGGAAATG-ATCTC----T------ATGTGC--ATGAGGGAGGATAGCAAATTGATGC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5676996 349 + 72422247 catgttccaaggaataaaggtggcgtctggatgctgaaaaatatcaagtacatagattctgcca-catagcc-ctcagaaagactgcagccctgcccaaaacttgatgttagccctgtgagtctcatttaaggcttctgagctccagtactgtaggctta------a-cagtcactttattgtaagatatgaagtttgtggtaattggttacagcagcaagaggaagtttatataGTAATTGTATCATGAAAATGAGAACCATAATTTACAACTGCTTTTAATACTGCA-----------------CTTGGATGTTTGAAATCACGTACATGGAAATG-ATCTC----T------ATGTGT--ATGAGGGAGGATAGCAAATTGATGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44115008 366 - 99891981 catgtttcaaggaataaaggtggcctctggattctgaaaaaaatcaagtacatagattctgcca-catagcc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgagtctcatttaaggcttctgaactccagaactgtaggatta------a-cggtcactttattgtaagatatgatgtttgtggtaattggttacagcagcaagagtaagtttatataGTAATTGTATCATGAAAATGAGAACCATAATTTACAACTGCTTTTAATACTGCAACCTTCCCGTCTTCTTGCTTGGATGTTTGAAATCATGTACATGGATATG-ATCTC----T------GTGTGT--ATGAGGGAGGACAGCAAATTGATGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52343842 365 + 185818997 catgttccaaggaatgaaggtggcctctggatgctgaaaaa-atcaagtacatagattctgcca-catagcc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------a-cagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAACTGCTTTTAATATTGCAACCTTCCCGCCTTCTTGCTTGGATATTTGAAATGAGGTACATGGATATG-ATCTC----T------ATGTGT--ATGACGGAGGACAGCAAATTGATGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989539 365 - 192294377 catgttccaaggaatgaaggtggcctctggatgctgaaaaa-atcaagtacatagattctgcca-catagcc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------a-cagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAACTGCTTTTAATATTGCAACCTTCCCGCCTTCTTGCTTGGATATTTGAAATGAGGTACATGGATATG-ATCTC----T------ATGTGT--ATGACGGAGGACAGCAAATTGATGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 336815 365 - 3123512 catgttccaaggaatgaaggtggcctctggatgctgaaaaa-atcaagtacatagattctgcca-catagcc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------a-cagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAACTGCTTTTAATATTGCAACCTTCCCGCCTTCTTGCTTGGATATTTGAAATGAGGTACATGGATATG-ATCTC----T------ATGTGT--ATGACGGAGGGCAGCAAATTGATGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7570081 365 - 10077455 catgttccaaggaatgaaggtggcctctggatgctgaaaaa-atcaagtacatagattctgcca-catagtc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------a-cagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAACTGCTTTTAATATTGCAACCTTCCCGCCTTGTTGCTTGGATATTTGAAATGAGGTACATGGATATG-ATCTC----T------ATGTGT--ATGACGGAGGACAGCAAATTGATGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121510142 365 - 127223203 catgttccaaggaatgaaggtggcctctggatgctgaaaaa-atcaagtacatagattctgcca-catagcc-ctcagaaagattgcagccctgcccacaacttgatgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------a-cagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAGCTGCTTTTAATATTGCAACCTTCCCGCCTTCTTGCTTGGATATTTGAAATGAGGTACATGGATATG-ATCTC----T------ATGTGT--ATGAGGGAGGACAGCAAATTGACGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 619253 365 + 1799296 catgttccaaggaatgaaggtggcctctggatgctgaaaaa-atcaagtacatagattctgcca-catagcc-ctcagaaagactgcagccctgcccacaacttgatgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------a-cagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAACTGCTTTTAATATTGCAACCTTCCCGCCTTCTTGCTTGGATATTTGAAATGAGGTACATGGATATG-ATCTC----T------ATGTGC--ATGACGGAGGACAGCAAATTGATGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177451 366 - 6934359 catgttccaaggaatgaaggtggcgtctggatgctgaaaaa-atcaagtacacagattctgcca-catagcc-ctcagaaagactgcagccctgcccacagcttgacgttagccctgtgaatctcatttaaggcttctgaactccagaactgtaggatta------gccagtcactttattctaagagatgaagtctgtggtaattggttgcagcagcaagaggaagtttatataGTAACTTTATCATGAAAGTGAGAACCATAATTTACAACTGCTTTTAATATTGCAACCTTCCCGCCTTCTTGCTTGGATATTTGAAATCATGTACATGGATATG-ATCTC----T------ATGTGT--ATGAGGGAGGACAGTAAATTGATGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20050132 364 + 128169293 cacgttccaaggaatgaaggtggcctctagatgctgaaaaa-attaagtacatagtttctgcca-cagcatc-ctcagaaagaatgcagcccagcccacaacttgacattaaccctgtgagtctcatttcagacttctgaactccagaactgtaagatta------a-cagtcactttattgt-agatactaagtttgtggcaactgattccagcagcaagagtaagttgatataGTGATTTTGTCATGAAGTTGAGAACCGTAATTGACCACTGCTTTTAATATTGCACCCTTCCCAGCTTCTTGCTTGGATGTTTGAAATCATGTGCATGGATATG-ATCTC----T------ATGTGT--ATGAGGGAGTATAGCAAATTGATGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17635450 362 + 18371965 cgtgttccaaggaatgaaggtggcctctagacacagaaaaa-attaagtgcataggttctgata-catagtc-ctcagaaagaatgcagcct-gctaacaactcaaagttagccctgtgaatctcatttcagacttctgaactccagaattgtaagatta------a-cagtcactttattgt-aaaaactaagtttgtggcaactggttatagcagcgagacgaagtttatataGTAATTTTATCATCAAAGTGAGAACCATAATTGACCACTGCTTTTAATATTGCAACCTTCCCATCCTCTTGCTTGGATGTTTGAAACCATGTGC-TGGATATA-ATCTC----T------CTGTGT--ATGAGGGAGTACAGCAGATTGATGC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2170479 363 - 3566421 catgttccaaggaatgaaggtggcctctagaagcagaaaaa-attaaatacatagattctgcca-catcgtc-ctcagaaagaatgcagccctgccaacaactcgacgttagccctgtgagtctcatttcagacttctgaactccagaactgtaacatta------a-cagtcactttattgt-agatactaagttggtggcaactggttacagcagcaagaggaagtttatataGCAATTTTATCATGAAAGTGAGAACCATAATTGACCACTGCTTTTAATGTTGCAACCTTTCCATCTTCTTGCTTGGATGCTTGAAATCATGTGC-TGGATATA-ATCTC----T------CTGTGT--ATGAGGGAGCGTAGCAGATTGATGC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7369813 365 + 9267652 catgttccaaggaatgaaggtggcctcttgacacagaaaaa-attaagtacatagattctgcca-catcgtc-ctcagaaagaatgcagccctgcccacaactcgatgttagccctgtgagtctcatttcagacttctgaactccagaactgtcagatta------a-cagttactttattgtaagatactaagtttgtggcaactggttacagcagcaagaggaaGTTTAAATAGTAATTTTATCATGAAAGTGAGAACCGTAATTGACCACTGCTTTTAATATTGCAACTTTCCCATCTTCTTGCTTGGATGTTTGAAACCATGTGCATGGATATG-ATCTC----T------ATGTGT--ATGAGGGAGTACAGCAAATTGATGC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1579863 367 - 14340318 tgtggtccaaggaatgaaggcagtgcccagatgctggaaaa-atcaaaggaacagatcctccca-cacagctgctgggaggaagaggggacctgtccacagcttgattttagccttggaagccccacttcagacttctgactgctggaatggtaggataacattaca-tagttggcttgttttgcatcactaaatttgtggcaatttgttgcagtagcaataggaagctcatacaCTAATCCCACTGTGAGACTGATGACCGTAATTTACCACCAGTCTTACTA----AACATGCCTGTGTTC-TGCTTGA----CTGAAATCATGGGCTTGCATATG-GTCTCTGTTT------ATGTGT--GTGAAGGAGAATCAAAAATTGATGC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4076240 355 + 55844845 catgagccaaggaatgcaggcaatctccacatgctggaaat-attgaaggaaaacattttcccattaaagcc-tgcagtaggaaggcagccctcccgataaccttgactttctgcttttggtcctacttcagacttt--gacttgaagataataacattt------a--------tttgttttaattcgctaaattggtattaatctgttacagc------aagaagctaatacaCTAATCTTATCTCAAGAGAGGGGACTATGATTTATCACTGGTCCTACAACTGCAACCTTTTTGT-TCCTTGGTTGGATGTTTGATATTGTGGATATGGGTATG--TCTC----TACTTGCATGTGT--ATGGAGGGGTATAGCACACTCACAC i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 242528 362 - 1446996 cactagacacagaaacaggttggcctctaggtcctggaaaa-gtcaaggaagtgattgc--ccc-tagagcc-tcccaaaggaactcaatcctgctgacaccttgattttagccccata----tgatttcagacctttaaaatccagaaccataaagtaa-----ta-taacggccttattttaagccattaagtttgtgggaatttgttatagcagcaataggaagcACGTACACTAATCTTATCATGAGAGAGATGACTGTAATTCA-GACTTGTCTTAAGACTCAAGCTTTCCTGCCTACTTGGCTGGGTGCTTAAAATTCTTGTCATAGATATGTATGTC----A------ATGTTTTCATGAGCGGGTATAGCAAATTTACAA i dasNov3.JH578441 C 0 C 0 a score=48030.000000 s hg38.chr14_KI270725v1_random 105804 6 + 172810 CAAAA-T s panTro5.chr7 52593241 6 + 166211670 CAAAA-T i panTro5.chr7 C 0 C 0 s panPan2.chr7 74653589 6 + 162613886 CAAAA-T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86060 6 + 126596 CAAAA-T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5677345 6 + 72422247 CAAAA-T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44115374 6 - 99891981 CAAAA-T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52344207 7 + 185818997 CAAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989904 7 - 192294377 CAAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337180 7 - 3123512 CAAAAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7570446 7 - 10077455 CAAAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121510507 7 - 127223203 CAAAACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 619618 7 + 1799296 CAAAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177817 7 - 6934359 CAAAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20050496 7 + 128169293 CCAAAAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17635812 7 + 18371965 CAAAAAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2170842 7 - 3566421 CAAAAAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370178 7 + 9267652 CAAAAAC i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 87945 6 + 1121937 CATAA-T i tarSyr2.KE946558v1 N 0 I 1013 s otoGar3.GL873564 1580230 6 - 14340318 CAAAA-T i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4076595 7 + 55844845 TAATAAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 242890 6 - 1446996 CAGAA-T i dasNov3.JH578441 C 0 C 0 a score=8637201.000000 s hg38.chr14_KI270725v1_random 105810 645 + 172810 AACGCAAATACAA-TCTTAAACTTATTTCTATGTAGGTTTC-------------TTTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGAACTATGATATTTTGATGAAATTAGACTAAAATGAACAATAAGAAAATAAGAACTTAC--TTGTATTCTTTATATGGTCAGTAAAGAAGTGATAGTTGAAAAAAACAAGGTCAAATGAAGGTGATGATTTAGGAAGTTGGAAAGATAGC-CTAAACTACAAAATGGTATATAACTAGTGAACACTT--AGACACACTGATTGATGAACTT--C--AGCTTTTGGATTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATCTGCAATCTCCTTGTGGAAAAACAGGCGAAAACACATTTCAGCCTAAT---AAGATTTACCTACTAATGAGTCAAGACTTGATCCATTTGTCCTCGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTGAACAACCGTTGCTGATTATCATCAC--ATACCTGGCATTCTCTTTTATCTGATATCTGAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACAGTTTAATTTCAATCTTAGA---ACAGTTGTCTTTGAGAAATTCTTCCCTCTACTGCATCTGTGAATGGGCATA---------------------GCATGGTTA s panTro5.chr7 52593247 646 + 166211670 AATGCAAATGCAAATCTTACACTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGATGAAATTAGACTAAAATGAACAACAACAAAATAAGAGCTTAC--TTATATTCTTTATATGGTCAATAAAGAAGTGATAGTGGAAAAAAACAACAACAAATGAAGGTGATGATTTAGGAAGTTGGAAAGATAGC-TTAAACTACAAAATGGTATATAACTAGTGAACACTT--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCCTGTGGAAAAACAGGGGAAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTTAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTTTTATTTGATATCTAAAATATTTGTTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTTGAGAAATTCTTCACTTTAGTGCATCTATGAATGGGCATA---------------------ACATGGATG i panTro5.chr7 C 0 C 0 s panPan2.chr7 74653595 644 + 162613886 AACGCAAATGCAA-TCTTACACTCATTTCTATGTAGGTTTC-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGAATTATGATATTTTGATGAGATTAGACTAAAATGAACAATAACAAAATAAGAACTTAC--TTGTATTCTTTATATGGTCAATAAAGAAGTGATAGTGGAAAAAAACAAGGTCAAATGAAGGTGATGATTTAGGAAGTTGGAAAGATAGC-CTAAACTACAAAATGGTATATAACTAGTGAACACTT--AGACACACTGATTGATGAACTT--C--AGCTTTTGCATTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGCAATCTCCTTGTGGAAAAACAAGTGAAAACACATCTCAGCCTAAT---AAGATTTATCTACTAAAGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTGAACAACCATTACTGATTATCATCGC--ATACTT-GCATTCTCTTGTATCTGATATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGATTAATTTCAATCTTAGA---ACAGTTGTCTTTGAGAAATTCTTCCCTCTACTGCATCTGTGAATGGGCATA---------------------GCATGGTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86066 645 + 126596 AATGCAAATGCAAATCTTACACTCATTTCTATGTAGGTTTC-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAAGATTGTGATCTTTTGATGAAATTAGACTAAAATGAACAATAACAAAATAAGAACTTAC--TTATATTCTTTATATGGTCAATAAAGAAGTGATAGTGG-AAAAAACAAGATCAAATGAAGGTGATGATTTAGGAAGTTGGAAAGATAGC-TGAAACTACAAAATGGTATATAACCAGTGAACACTT--AGACACACTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGAAAACACATCTCAGCCTAAT---AAGATTTATCTACTAAAGAGTCTAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATGTATTGTGTGAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTTGTATCTGATATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTGAGTCTTAGA---ACAGTTGTCTTTGAGAAATTCTTCCCTCTACTGCATCTGTGAATGGGCATA---------------------GCATGGTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5677351 646 + 72422247 AACGCAAATGCAAATCTTACACTCATTTCTATGTAGGTTTC-------------ATTTAACCTTTGAAATTA-------------------AAATGAAATTAAAGGGTTGTGATATTTTGATGAAATTAGACTAAAATGAACAATAACAAAATAAGAACTTGC--ATATATTCTTTATATGGTCAATAAAGAAGTGATAGTGGAAAAAAACAAGATCAAATGAGGGTGATGATTTAGGAAGTTGGAAAGATAGC-TTAAACTACAAAATGGTATATAACTAGTGAACGCTT--AGACATATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTTCTTGTGGAAAAACAGGGGAAAACACATCTCAGCCTAAT---AAGATTTATCTACAAAAGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTGAACAACCATTGCTGATTATCATTGC--ATACCTGGCATTCTCCTTTATCTGATATCTAAAATATTGGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTATGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTTGAGAAATTCTTCCCTCTACTGCATCTGTGAATGGGCATA---------------------GCATGGTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44115380 643 - 99891981 AATGCAAATGCAAATCTTACACTCATTTATATGTAGTTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGATGAAATTAGTCTAAAATGAACAATAACAAAATAAGAACTTAC--TTATATTCTTTATATGGTCAACAAAGAAGTGATAGAGG-GAAAAACAGGAACAAATGAAGGTGATGATTTAGGAAGTTGGAAAGATAGC-TTAAAATACAAAACGGTATATAACTAGTGAACACTT--AGAGGCATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAAT--GGGAAAAGACATCTCATTATAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTTAACAACAATTGCTGATTATCATCGC--ATACCTGGCATTCTCTTTTATCTGATATCTAAAATATTTGTTAATTTCTGGACTTTCTCTTTTCATACCCAGTACAGTTTAATTTCAATCTTAGA---ACAGTTATCTTTGAGAAATTCTTCCCTTTATTGCATCTGTGAATGGGCATA---------------------ACATGGATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52344214 634 + 185818997 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGATGAAATTAGAGTAAAATGAACAATAA-AAAATAAC-------------ATTCTTTATATGGTTAATAAGGAAGTGATAGTGGAAAAAAGCAAGAACAAATGAAGATGATGATTTAGGAAGTTGAAAAGATAGC-TTAAACTACAAAACTGTATATAACTAGTGAACACTT--AGAGACATTGAATGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCGGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGGAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATCGTGTTAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTCTTATCTGACATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTGGAGAAATTCTTCCCTTTAGTGCATCTGTGAATGGGAATA---------------------ACATGGGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124989911 634 - 192294377 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGATGAAATTAGAGTAAAATGAACAATAA-AAAATAAC-------------ATTCTTTATATGGTTAATAAGGAAGTGATAGTGGAAAAAAGCAAGAACAAATGAAGGTGATGATTTAGGAAGTTGAAAAGATAGC-TTAAACTACAAAACTGTATATAACTAGTGAACACTT--AGAGACATTGAATGATGAACTT--C--AGCTTTCGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGGAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATCGTGTTAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTATTATCTGACATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTGGAGAAATTCTTCCCTTTAGTGCATCTGTGAATGGGAATA---------------------ACATGGGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337187 634 - 3123512 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGATGAAATTAGAGTAAAATGAACAATAA-AAAATAAC-------------ATTCTTTATATGGTTAATAAGGAAGTGATAGTGAAAAAAAGCAAGAACAAATGAAGGTGATGATTTAGGAAGTTGAAAAGATAGC-TTAAACTACAAAACTGTATGTAACTAGTGAACACTT--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGGAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATCGTGTTAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTCTTATCTGACATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTGGAGAAATTCTTCCCTTTAGTGCATCTGTGAATGGGAATA---------------------ACATGGGTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7570453 634 - 10077455 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGATGAAAGTAGAGTAAAATGAACAATAA-AAAATAAC-------------ATTCTTTATATGGTTAATAAGGAAGTGATAGTGGAAACAAGCAAGAACAAATGAAGGTGATGATTTAGGAAGTTGAAAAGATAGC-TTAAACTACAAAACTGTATATAACTAGTGAACACTT--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGAAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATCGTGTTAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTTTTATCTGACATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCCGTACGATTTAATTTCAATCTTAGA---ACAGTTGTCTTGGAGAAATTCTTCCCTTTAGTGCATCTGTGAATAGGAATA---------------------ACATGGGTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121510514 634 - 127223203 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATAAAATTAAAGGATTTTTAAATTTTGATGAAATTAGAGAAAAATGAACAATAA-AAAATAAC-------------ATTCTTTATATGGTCAATAAGGAAGTGATAGTGGAAAAAAGCAAGAATAAATGAAGGTGATGATTTAGGAAGTTGAAGAGATAGC-TTAAACTACAAAACTGTATATAACTAGTGAACACTT--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGAAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATGTATCGTGTTAACAACCATTGCTAATTATCATCGC--ATACTTGGCATTCTCTTTTATCTGACATCTAAAATATTTGGTAATTCCTAGACTTTCTCTTTTCAAACCCAGTATGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTGGAGAAATTCTTCCCTTTAGTGCATCTGTGAATGGGAATA---------------------ATATGGGTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 619625 634 + 1799296 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AGATGAAATTAAAGGATTATTAAATTTTGATGAAATTAGAGTAAAATGAACAATAA-AAAATAAC-------------ATTCTTTATATGGTTAATAAGGAAGTGATAGTGGAAAAAAGCAAGAACAAATGAAGGTGATGATTTAGGAAGTTGAAAAGATAGC-TTAAACTACAAAACTGTATATAACTAGTGAGCACTA--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGAAAAGACATCTCAGCATAAT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATCGTGTTAACAACCATTGCTGATTATCATCGC--ATACCTGGCATTCTCTTTTATCTGACATCTAAAATATTTGGTAATTCCTGGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTCAATCTTAGA---ACAGTTGTCTTGGAGAAATTCTTCCCTTTAGTGCATCTGTGAATGGGAATA---------------------ACATGGGTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5177824 636 - 6934359 AATGCAAATGCAAATCTTACATTCATTTATATGTAGGTTTA-------------ATTTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATT-AATTTTGATGAAATTAGAGTAAAATGAACAATAACAAAATAACA-----------TATTCTTTATATGGTCAATAAGGAAGTGATAGTGGAAAAAAGCAAGAACAAATGAAGGTGATGATTTAGGAAGTAGAAAAGACAGC-TTAAACTACAAAACTGTATATAACTAGTGAACACTT--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTGGTGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTGATCTCCTTGTGGAAAAACAGAGGAAAAGACATCTCAGCATAGT---AAGATTAATCTACTAAGGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATGTATTGTGTTAACAACCATTGCTGATTATCATCGC--ATAGCTGGCATTCTCTTTTGTCTGACATCTAAAATATTTGGTAATTCCTAGACTTTCTCTTTTCAAACCCAGTACGGTTTAATTTCAATCTTAGA---ACGGTTGTCTTGGAAAAATTCTTCCCTTTAGTGCATCTGTGAATGGGAATA---------------------ACATGGGTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20050503 648 + 128169293 AATGTAAATGCAAATCTTACACTCATTTATATGTAGATTTA-------------ATGTAATCTTTGAAATTA-------------------AAATAAAATTAAAGGATTATTAAATTTTGGTGCAATTAGACTAAAATGAACACTAACAAAATAAGAAGCTAC--TTATATTAATTATATGGTCAATAAGGAAGTGATAGTGGAAAAAAACAAGAACAAATGAAGGTGATGATTTAGGAAGTTGGAAAG--AGC-TTAAACTACAAAACTGTATATAACTAGTGAACAGTT--AGAGACATTGATTGATGAACTT--C--AGTTTTTGGCTTAGCGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGAAAAGACATCCCAGCATAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATCCATTCGTCCTTGTAATTT-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTTAACAATCATTGCTGATTATCATCGCATACACCTGGCATTCTCTGTTATCTGACATCTAAAATATTTGG-AATTTCTGGACCTTCTCTTTTCAAATCCAGTAGGGTTTCATTTTAGTCTTAGATTCTCAGTTGTTTTTGAGAAATTCTTACCTCTAGTGCCTCTGTGAATGGGAATA---------------------ACATGGATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17635819 659 + 18371965 AATTTAAATACAAATCTTACACTCATTTATATGTAGGTTTA-------------ATGTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGGTGAAATTAGACTAAAATGAACACTAACAAAATAAGAAGTTAC--TTATATTCATTATATGGTCAATAAGGAAGCGATAGTGAATAAAAACAAGAACAAATGAAGGTGATGATTTAGGAAGTTGGAAA--------TAAACTACAAAAGTGTATACAACTAGTGAACAGTT--AGAGACATTGATTGATGAAATT--C--AGCTTTTGGCTTAGCAAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAACCAGGGGAAAAGACATCGCAGCATAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATCCGTTTGTCCTTGTAATCC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTTAACAACCATTGCTGATTATCATCAC--AAACCTGGTACTCTCTGTTATCTGACACCTAAAATATTTGG-AATTTCTGGACTTTCTCTTTTCAAATCCAGTAGGGTTTCATTTCAGTCTTAGA---ACAGCTGTTTTTGAGAAATTCTTACCTCTAGTGCATCTGTGAATGGGAATACATTCATGGATTCATATATACACATGGATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2170849 631 - 3566421 AATGTAAATGCAAATCTTACACTCATTTATATGTAGGTTTA-------------ATGTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGGTGAAATTACACTAAAATGAACACTAACAAAATAAGAAGTTAT--TTATATTCATTATATGGTCAACAAGGAAGTGATAGCGGAAAAAAACAAGAACAAATGAAGGTGATGATTTAGGAAGTTGGAAAG--AGC-TTAAACTACAAAACTGTATATAACTCGTGAACAGTT--AGAGACATTGATTGATGAACTT--C--AGGTTTTGGCTTAGCGAGAGCATAAAATGAGAGCAGCTGAG------------GTAATCTCCTTGTGGAAAAACAGGGGAAAAGACATCCTAGCAAAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATACATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTATTAACAACCATTGCTGATTATCATCTC--ATACCTGGCATTCTCTGTTATCTGATATCTAAAATATTTGA-AATTTCTGGACCTTCTCTTTTCAAATCCAGTAGGGTTTCATTTCAGTCTTAGA---ACAGTTGTTTTAGAGAATTTCTTACCTCTAGCACATCTGTGAATGGGAATA---------------------ACATGGATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370185 645 + 9267652 AATGTAAATGCAAATCTTACACTCATTTATATGTAGGTTTA-------------ATGTAATCTTTGAAATTA-------------------AAATGAAATTAAAGGATTATTAAATTTTGGTGAAATTAGACTAAAATGAACACTAACAAAATAAGAAGTTAC--TTATATTCATTATATGGTCAATAAGGAAGTGATAGTGGAAAAAAACAAGAACAAATGAAGGTGATGATTTAGGAAGTTGGAAAGATATT-TTAAACTACAAAACTGTATATAACTAGTGAAGAGTT--AGAGACATTGATTGATGAACTT--C--AGCTTTTGGCTTAGCGAGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCTTGTGGAAAAACAGGGGAAAAGACATCCCAGCATAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCAAATACTGATTTGATATATTGTGTTAACAACCATTGCTGATTATCATCAC--ATACCTGGCATTCTCTGTTATCTGACATCTAAAATATTTGG-AATTTCTGGACCTTCCCTTTTCAAATCCAGCAGGGTTTAATTTCAGTCTTAGA---ACAGTTGTTTTTAAGAAATTCTTACCTCTAGTGCATCTGTGAATGGGAATA---------------------ACATGGATA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1580236 584 - 14340318 ------AATGTAAAAATTA-------------GTCGCATGG-------------GTTTAATCTTTGAAGTGT-------------------AAGTGAAATTCAAAGATTATT------------------------------------AAGATTGT------T--TTCTTTTCATTATATGGTTGATAAGGAAGTGATAGTGAAAAAGAACA----CAAATAGAAGTGATAATTTAGGAAGCTGGAAAAACAGC-TTAAACCACAAAACTGTATATGACCAGTGCACACTTAGAGAGACATTGATTGATGAACTGAAT--AGCTTCTGGCTTAACAAGAGTGTAAAATGAGACCAGCTAAGGTTGGCAAATTTGTAATCTCCTTGTGGAGAAACAGGGGAAAAGAAATCTGAACATAAT---AAGATTAATCTACTAAAGAGTCAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGTTAATTTAAATATTGATTTGACATATTGCGTTAACAACCACTTCTGATTATCATCAC--ATCCCTGGCGTTCTCTTTTATCTGACATCTAAAATATTTGGTAATTCCTAGGTTTTCTCTTTTCAGAGCCAGGATGGCTTAATTTCAATATTGGA---GCAGTTGTCTCTGAGAAATCTTTCCCTC-AGTACATCTGTGCACAGGAATA---------------------GCACAGATA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4076602 675 + 55844845 GCAGTATATGCAAAGCACATATTTGCTTATGCTCAGATTTAatatatattatatatattattatgtatattatatatatatatatGGAGAGAGAAAGAATTCAAAGATTATTAAATTTGGA-GAAAGTTGACTAAAGTTCACAATAATGGGATAGGGAGTTGCTGTCTTATTTTTATTATGATTAATAAGTAAGTGAGAGTGA-AAAAAACAAGAATAAATGAAGGTGATAATTTAGGAAGTTGGAAAGGCAGCATTAAGCTACAAAACTGTATATAACTTGTGAGCACTT--AGAGACATTGATTGATGAACTA--TAGAGCTTCTGGCTTAGTGGGAGCATAAAATGAGAGCAGCTGAGGTTTGCAAATTTGTAATCTCCCTGTGGAAAAACATGGAAAAAGACATCTCAGCATAATAAGAAGAAGAATCTATTAAAGACTTAAGACTTGATCCATTTGTCCTTGTAATTC-AAAAGCTAATTCATATACTGATCTGATATATTGTGTTAACAGCCATTGCTGATTATCATAGC--ACACCTGTCATTCTCTTGTATCTGACATCTAAAATATTCAGTAATCTC-GGACTTTCTCTTC---AACCGTATATAGCCTATTTTCAATCTTAGT--------TTCCTCTGAGAAATCTTTCTCTCTACCACATTTACGAATGTGGAAA---------------------CCATGGATG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 242896 624 - 1446996 AATGGAAATATAAGGCACATATTAATTTA-ATTTAGGGATG-------------ATATAATCTTTTAAAATT-------------------AAATGAAGCCAAA-GATTATTGAGCTTTGGAGAAATTAAACTAAAATGAGCAATAATGGAATCATTTATCTT--TTTTGTTTTTCCTATA--TAAAAAAGAAGTGATAGTGAAGAAGAATAAGAATAAATGAAAGTAATTATTTACAAAGTTGGAAAGGAAGC-TTAAACTACAAAATTGTGTATAACTTGTGAGCACTT--AGACACATTGATTGATGAACTGAAT--AGCTCCTAGCTTAGCAAGAACAGAAAATAAAAGCGGCTGAGGTTTGCAAATTTGTAATCTCCTCATGGAAAAACAGGGGAAACGACATCTCAGCATAAT---AAGATTAATCTATTTGAGACTCAAGACTTGATCCATTTGTCCTTGTAATTCAAAAAGTTAATTCAAATACGGATCTGATATATTTTGTTAACAACCACTGTGGATTAGCACAGT--CTACATGGCCTCCTCCTTTATCTGATATCTAAATTAATCAGTAATTCCTGGACTTTCTCTTTCCAGACTGGAGGTGGCTTAATTTCAAACTTAGA-----------------GGAATCTTTCCC-------AATCAGTGAATAAGAATA---------------------AAATGGATA i dasNov3.JH578441 C 0 I 1212 e tarSyr2.KE946558v1 87951 1013 + 1121937 I a score=163568.000000 s hg38.chr14_KI270725v1_random 106455 13 + 172810 CATACGTACTATC s panTro5.chr7 52593893 13 + 166211670 CATATATACTGTC i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654239 13 + 162613886 CATACATACTATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86711 13 + 126596 CATACATACTGTC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5677997 13 + 72422247 CGTACATACTGTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116023 13 - 99891981 CATATATACTGTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52344848 13 + 185818997 CATATATACTGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990545 13 - 192294377 CATATATACTGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337821 13 - 3123512 CATATATACTGTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571087 13 - 10077455 CATATAtactgtc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511148 13 - 127223203 CATATAtactgtc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 620259 13 + 1799296 CATATAtactgtc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178460 13 - 6934359 CATATAtactgtc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051151 13 + 128169293 CATATATACTGTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636478 13 + 18371965 CACATATACTGTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171480 13 - 3566421 CATATATATTGTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370830 13 + 9267652 CATATATACTGTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1580820 12 - 14340318 CACATAC-CCGTC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4077277 13 + 55844845 CCTACATAATGTC i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 243520 1212 - 1446996 I e tarSyr2.KE946558v1 87951 1013 + 1121937 I a score=1111581.000000 s hg38.chr14_KI270725v1_random 106468 99 + 172810 ACCACAGAGAACATTTGTTGAAT---T---------AAAGCCA---------------AAGTT--TAAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATAT----TTTCCTCCCCAA-----------T-AGCCACAAAAATA s panTro5.chr7 52593906 99 + 166211670 ACCCCAGAGAACATTTGTTAAAT---T---------AAAGCCA---------------AAGTT--TAAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATTT----TTTCCTCCCCAA-----------T-AGCCACAACAATA i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654252 99 + 162613886 ACCACAGAGAACATTTGTTGAAT---T---------AAAGCCA---------------AAGTT--TAAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATGT----TTTCCTCCCCAA-----------T-AGCCACAACAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86724 99 + 126596 ACTCCATAGAACATTTGTTAAAT---T---------AAAGCCA---------------AAGTT--TAAAGCAAGAGCTTTAACTTACTGGTTTTAC-TAATGT----TTTCCTCCCCAA-----------T-AGCCACAACAATA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678010 98 + 72422247 GCCCCAGAGAACATTTGTTAAAT---A---------AAAGCCA---------------AAGTT--TAAAGCAACAGCCTTAACTCACTGGTTTTAC-TAATG-----TTTCCGCCCCAA-----------T-AGCCACAACAATA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116036 99 - 99891981 ACCCCAGAGAACATTTGTTAAAT---T---------AAAGCCA---------------AAGTT--TAAAACAACAGCTTTAACTCACTGGTTTTAC-TAATTT----TTTCCTCCCCAA-----------T-AGCCACAACAATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52344861 98 + 185818997 ACCCCAGAAAACATTTGTTAAAT---T---------AAAACCA---------------AAGTT--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCACAA-----------T-AGCCATAACAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990558 98 - 192294377 ACCCCAGAAAACATTTGTTAAAT---T---------AAAACCA---------------AAGTT--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCACAA-----------T-AGCCATAACAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337834 98 - 3123512 ACCCCAGAAAACATTTGTTAAAT---T---------AAAACCA---------------AAGTT--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCACAA-----------T-AGCCATAACAATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571100 96 - 10077455 accccagaaaacatttgttaaat---t---------aaagcca---------------aagtt--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCTCAA-----------T-AGCC--AACAATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511161 98 - 127223203 accccagaaaacatttgttaaat---t---------aaagcca---------------aagtt--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCCCAA-----------T-AGCCATAACAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 620272 96 + 1799296 accccagaaaacatttgttaaat---t---------aaagcca---------------aagtt--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCTCAA-----------T-AGCC--AACAATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178473 98 - 6934359 accccagaaaacatttgttaaat---t---------aaagcca---------------aagtt--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATT-----TTTCCTCCCCAA-----------T-AGCCATAACAATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051164 99 + 128169293 ACCCCAGAGAAAATGTGTTAAAT---T---------CAAGTAG---------------AAGTT--TCAAGCAACAGCTTTAACTCACTGGTTTCAC-TAATTT----TTTCCTCCCCAA-----------T-AGGTATAACAATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636491 98 + 18371965 ACCCCAGAGAAAATTTGTTAAAT---T---------CAAGTAG---------------AAGTT--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TGA-TT----TTTCCTCCCCAA-----------T-AGGCATAACAATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171493 99 - 3566421 ACCCCAGGGAAAATTTATTAAAT---T---------CAAGTAG---------------AAGTT--TCAAGCAATAGCTTCAACTCACTGGTTTTAC-TAATCT----TTTCCTCCCCAA-----------T-AGGAATAACAATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370843 99 + 9267652 ACCCCAGAGAAAATTTGTTAAAT---T---------CAAGTAG---------------AAGTT--TCAAGCAACAGCTTTAACTCACTGGTTTTAC-TAATTT----TTTCCTCCCCAA-----------T-AGGCATAACAATA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1580832 105 - 14340318 ACCCTGGAGAACATTGGTGCAAT---TTGCATTAGAATAGCAA--------------CAAGTT--GGAATTAACATTTTTGACTCATTAGTTTGTT-AAATTT--TCTCTCCTCCCTTA-----------A-TGGCACA------ i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4077290 119 + 55844845 ACCCCAGACAACATGTGTTAAATGCAT---------TAAATTT---------------GCGTTAGTATATCAACAGCTTTCACTCATCAATTTTGC-TAATTTGTTTTCTCCTCTCCAAATTTATGTCTCC-ATCCACATAAATG i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 244732 114 - 1446996 --ACCACAGAATATTTATTAAAC---A---------TAATTTGCATTAGAATATCACCAAGTT--TGAATTAACTGCTTTAACTCATAAGTTTTGCTTAACTT----CCTCCTCCCTTA-----------TGAATTACATAATTA i dasNov3.JH578441 I 1212 C 0 e tarSyr2.KE946558v1 87951 1013 + 1121937 I a score=62412.000000 s hg38.chr14_KI270725v1_random 106567 6 + 172810 --TTGATA s panTro5.chr7 52594005 6 + 166211670 --TTGATA i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654351 6 + 162613886 --TTGATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86823 6 + 126596 --TTGATA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678108 6 + 72422247 --TTGATA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116135 6 - 99891981 --TTGATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52344959 6 + 185818997 --TTGATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990656 6 - 192294377 --TTGATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337932 6 - 3123512 --TTGATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571196 6 - 10077455 --TTGATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511259 6 - 127223203 --TTGATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 620368 6 + 1799296 --TTGATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178571 6 - 6934359 --TTGATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051263 6 + 128169293 --TTTATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636589 6 + 18371965 --TTTATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171592 6 - 3566421 --TTTATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370942 6 + 9267652 --TTTATA i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 88964 6 + 1121937 --TTTATG i tarSyr2.KE946558v1 I 1013 I 2236 s canFam3.chr18 4077410 6 + 55844845 --TTAACT i canFam3.chr18 I 1 I 1 s dasNov3.JH578441 244846 4 - 1446996 ATTT---- i dasNov3.JH578441 C 0 C 0 e otoGar3.GL873564 1580937 0 - 14340318 C a score=460781.000000 s hg38.chr14_KI270725v1_random 106573 43 + 172810 CCCTCACACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC s panTro5.chr7 52594011 43 + 166211670 CCCCCACACCTTTTAACGT-AAAGCTTGGTGTTGTCTATTTTTC i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654357 43 + 162613886 CCCTCACACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86829 43 + 126596 CCCTCACACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678114 43 + 72422247 CCCTCACACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116141 43 - 99891981 CCCCTACACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52344965 43 + 185818997 TCCCCACACCTTTTAACAT-AAAGCTTCGTGTGGTCTATTTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990662 43 - 192294377 TCCCCACACCTTTTAACAT-AAAGCTTCGTGTGGTCTATTTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337938 43 - 3123512 TCCCCACACCTTTTAACAT-AAAGCTTCGTGTGGTCTATTTTTC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571202 43 - 10077455 TCCCCACACCTTTTAACAT-AAAGCTTCGTGTGGTCTATTTTTC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511265 43 - 127223203 TCCCCACACCTTTTAACAT-AAAGCTTCATGTGGTCTATTTTTC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 620374 43 + 1799296 TCCCCACACCTTTTAACAT-AAAGCTTCGTGTGGTCTATTTTTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178577 43 - 6934359 TCCCCACACGTTTTAACAT-AAAGCTTCGTGTGGTCTATTTTTC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051269 42 + 128169293 TCCCC-CACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636595 40 + 18371965 TCCCCACACCTTTTAAC----AAGCTTGGTGTTGTCTATTTTTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171598 39 - 3566421 TCCCCACACCCTTTAACAC-AAAGCTTGGTG----CTATTTTTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370948 43 + 9267652 TCCCCACACCTTTTAACAT-AAAGCTTGGTGTTGTCTATTTTTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1580937 27 - 14340318 -CCTTATTTATTTTCCCCT-ACAACTTCT--------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4077417 43 + 55844845 CCCCTATTTCCTTTACCAT-GAAGGCTGGGGCCTTCCGGTTCTT i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 244850 44 - 1446996 GCCTGGTGTCCTATACAATGAAGGCTGAGAAGTTTTTATTTTTC i dasNov3.JH578441 C 0 I 66 e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=1680305.000000 s hg38.chr14_KI270725v1_random 106616 147 + 172810 AGGTGCTGTCATCTATATGATCTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcttgtaataccagcagttgaagaggctgaaatgagaggattccttgagcccaggagttcaagagcaatctgggcaacatag s panTro5.chr7 52594054 147 + 166211670 AGGTACTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctgtaataccagcagtttaagaggctgaaatgagaggattctttgagcccaggagttcaagaacaacctgagcaacatag i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654400 147 + 162613886 AGGTGCTGTCATCTATATGATCTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcttgtaataccagcagttgaagaggctgaaatgagaggattccttgagcccaggagttcaagagaaacctgggcaacatgg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 86872 147 + 126596 AGGTGCTGTCATCTATATGATCTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggttcatgcttgtaataccagcagttgaagaggctgaaatgagaggattccttgagcccaggagttcacaagaaacctgggcaacatag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678157 147 + 72422247 AGGTGCTGTCATCTATATGATCTCAGTATTTTAAAAATCAGCTTCCAGCCCTTATggtggctcgtgcctgtaataccagcagttgaagaggctgaaatgagaggattctttgagcccaggagttcaagagcaacctgggcaacatag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116184 147 - 99891981 AGGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctgtaataccagcagtttaagaggctgaaatgagaggattctttgagcccaggagttcaagagcaacctgggcaacatag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345008 147 + 185818997 AGGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctgtcataccagcattttaagagactgaaatgagaggattctttgagcccaggacttcaaaagcaacctgggcagtatag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990705 147 - 192294377 AGGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctgtaataccagcattttaagagactgaaatgagaggattctttgagcccaggacttcaagagcaacctgggcagtatag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 337981 147 - 3123512 AGGTGCTGTCATCTATATGATTTCAATATTTTAAAAATCAGCTTCCAGCCCATATggtgactcatgcctgtaataccagcattttaagagactgaaatgagaggattctttgagcccaggacttcaagagcaacctgggcagtatag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571245 147 - 10077455 AGGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctgtaataccagcattttaagagactgaaatgagaggattctttgagcccaggacttcaagagcaacctgggcagtatag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511308 147 - 127223203 AAGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctctaataccagcattttaagagattgaaatgagaggattctttgagcccagggcttcaagagcaacctgggcagtatag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 620417 147 + 1799296 AAGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgcctgtaataccagcactttaagagactgaaatgagaggattctttgagcccaggacttcaagagcaacctgggcagtatag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178620 147 - 6934359 AGGTGCTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTTCAGCCCATATggtggctcatgcctgtaataccagcattttaagagattgaaatgagaggattctttgagcccaggacttcaagagcaacctgggcaatatag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051311 146 + 128169293 AGGTACTGTCATCTATATGATTTCAGTATTTT-AAAATCAGCTTCCAGCCCATATggtggcttatgtctgtaataccagtattttaagaggctgaaataagaggattctttgagcccaggagttcaagagcaacctggacaacatag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636635 147 + 18371965 AGGTACTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtggctcatgtctgtaataccagcattttaagagggtgaaatgagaggattcattgagcccaggagttcaagagccacctggacaacatag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171637 147 - 3566421 AGGTACTGTCATCTATATGATTTCAGTATTTTAAAAATCAGCTTCCAGCCCATATggtgactcatgtctgtaatatcagcattttaagaggctgaaatgagaggattctttgagcccaggagttcaagagcaacctggacaacatag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7370991 147 + 9267652 AGGTGCTGTCATCTATATGATTTCGGTATTTTAAAAATCAGCTTCCAGCCCATATAAtggctcatgtttgtaatatcagcattttaagaggctgaaatgagaggattctttgagcccaggagttcaagagcaacctagacaacatag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1580964 47 - 14340318 --GTACTGTCACTCATATGAT-TCAATATTTTAAATATCACCTCCC---------------------------------------------------------------TTGA---------------------------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4077460 61 + 55844845 CTGTACTGTCATCTATATGAT-TCAGTGTTTGAAAAATTAATTCCCATT------------------------------------------------------GATTTCT-------------------------------ACATAG i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 244894 66 - 1446996 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=303379.000000 s hg38.chr14_KI270725v1_random 106763 35 + 172810 caagacccagtctctatcaaaagtt------aaaaaaaaaa s panTro5.chr7 52594201 38 + 166211670 caagacccagtctctaccaaaagtt---aaaaaaaaaaaaa i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654547 35 + 162613886 caagacccagtctctatcaaaagtt------aaaaaaaaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87019 35 + 126596 caagacccagtctctatcaaaagtt------aaaaaaaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678304 41 + 72422247 caagacccagtctctatcaaaagttaaaaaaaaaaaaaaaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116331 40 - 99891981 caagacccagtctctaccaaaagtt-attaaaaaagaaaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345155 37 + 185818997 caagatccagtctctaccaaaagtt----aaaaaaaaaaaa i rheMac8.chr3 C 0 I 2 s macFas5.chr3 124990852 36 - 192294377 caagatccagtctctaccaaaagtt-----aaaaaaaaaaa i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 338128 35 - 3123512 caagatccagtctctaccaaaagtt------aaaaaaaaaa i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 7571392 40 - 10077455 caagatccagtctctaccaaaagtt-aaaaaaaaaaaaaaa i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 121511455 35 - 127223203 caagatccagtctctaccaaaagtt------aaaaaaaaaa i chlSab2.chr21 C 0 I 12 s manLeu1.NW_012105809v1 620564 35 + 1799296 caagatccagtctctaccaaaagtt------aaaaaaaaaa i manLeu1.NW_012105809v1 C 0 I 6436 s colAng1.NW_012115910v1 5178767 40 - 6934359 caagatctagtctctaccaaaagtt-aaaaaaaaaaaaaaa i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 20051457 34 + 128169293 caagacccagtctgtaccagaagtt------agaaaaata- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636782 34 + 18371965 caagacccagtttgtaccaaaagtt------aaaaaaata- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171784 39 - 3566421 caagacccagtctgtaccaaaagtt-aaaaaaaaaaaata- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371138 34 + 9267652 caagacccagtctgtaccaaaagtt------aaaaaaata- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1581011 5 - 14340318 ----------TTTCT-------------------------- i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 244894 66 - 1446996 I e canFam3.chr18 4077521 0 + 55844845 C e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=240344.000000 s hg38.chr14_KI270725v1_random 106798 26 + 172810 ggtgggcatggtgatgtgcacctgtt s panTro5.chr7 52594239 26 + 166211670 ggtgggcatgatggtgtgcacctgtt i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654582 26 + 162613886 ggtgggcatagtgatgtgcacctgtt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87054 26 + 126596 agtgggcatggtgatgtgcacctgtt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678345 26 + 72422247 ggtgggcatggtgatgtgcacctgtt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116371 26 - 99891981 ggtgggcatggtggtgtgcacctgtt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345194 26 + 185818997 gctgggcatgatggtgtgcacctgtt i rheMac8.chr3 I 2 C 0 s macFas5.chr3 124990890 26 - 192294377 gctgggcatgatggtgtgcacctgtt i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 338165 26 - 3123512 gctgggcatgatggtgtgcacctgtt i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 7571434 26 - 10077455 gctgggcatggtggtgtgcacctgtc i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 121511502 26 - 127223203 gctaggcatggttgtgtgcacctatg i chlSab2.chr21 I 12 C 0 s colAng1.NW_012115910v1 5178809 26 - 6934359 gctgggcatggtggcgtgcacctgtt i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 20051491 26 + 128169293 gctgggcatggtggtgcacacctgtt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636816 26 + 18371965 gctgggcatggtggtgcacacctgta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171823 26 - 3566421 gctgggcagggtgctgcacacctgtt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371172 26 + 9267652 actgggcatggtggtgcacacctgtt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1581016 21 - 14340318 -----GCATTGCTATGTACAGATGAT i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 244894 66 - 1446996 I e canFam3.chr18 4077521 0 + 55844845 C e tarSyr2.KE946558v1 88970 2236 + 1121937 I e manLeu1.NW_012105809v1 620599 6436 + 1799296 I a score=27047.000000 s hg38.chr14_KI270725v1_random 106824 3 + 172810 gtc s panTro5.chr7 52594265 3 + 166211670 gtc i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654608 3 + 162613886 gtc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87080 3 + 126596 gtc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678371 3 + 72422247 gtc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116397 3 - 99891981 gtc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345220 3 + 185818997 gtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990916 3 - 192294377 gtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338191 3 - 3123512 gtt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571460 3 - 10077455 gtc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511528 3 - 127223203 gtc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627035 3 + 1799296 gtc i manLeu1.NW_012105809v1 I 6436 C 0 s colAng1.NW_012115910v1 5178835 3 - 6934359 gtt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051517 3 + 128169293 gta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636842 3 + 18371965 gta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171849 3 - 3566421 gta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371198 3 + 9267652 gta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1581037 3 - 14340318 GTC i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 244894 66 - 1446996 I e canFam3.chr18 4077521 0 + 55844845 C e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=1057700.000000 s hg38.chr14_KI270725v1_random 106827 118 + 172810 ctggctatttgggaggccaaggtggaaggattgcttgagctggggaggttgaatctgcagtaagcagtgattgcaccactacaccccagcctgggcaacaaagaaagaccctatctc-a s panTro5.chr7 52594268 118 + 166211670 ctagctatttgagaggccaaggtggaaggattgcttgagcttgggaggttgagcctgcagtgagcagtgattgcaccactgcactccagcctgggccacaaagcaagaccctatctc-a i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654611 118 + 162613886 ctagctatttgggaggacaaggtggaaggattgcttgagcttgggaggttgaatctacagtgagcagtgattgcaccactgcaccccagcctgggcaacaaagcaagaccctatctc-a i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87083 117 + 126596 ctaggtatttgggaggccaaggtggaaggattgcttgagcttgggaggctgaggctgcagtgagcagtgattgcaccactgcactccagcctgggcaacaaagcaagaccctatctc-- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678374 119 + 72422247 ctagctatttgggagtccaaggtggaaggattgcttgagcttgggaggttgaggctgcagtgagcagtgactgcaccactgcactccagcctgggcaacaaagcaagaccttatctcaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116400 118 - 99891981 ctagctatttgagaggccaaggtggaaggattgcttgagcttgggaggttgaggctgcagtgagcagtgattgcaccactgcactccagcctgggccacaaagcaaatccctatctc-a i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345223 118 + 185818997 ctagctatttgggaggctgaggtggaaggattgcttgagcttggggggttgaggctgcagtgagcagtgattgcaccactgtactccagcctgggcaccaaagcaagactctaactc-a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124990919 118 - 192294377 ctagctatttgggaggccgaggtggaaggattgcttgagcttggggggttgaggctgcagtgagcagtgattgcaccactgtactccagcctgggcaccaaagcaagactctaactc-a i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338194 118 - 3123512 ctagctatttgggaggccgaggtggaaggattgcttgagcttggggggttgaggctgcagtgagcagtgattgcaccactgtactccagcctgggcaccaaagcaagactctaactc-a i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571463 112 - 10077455 ctagatatttgggaggccaaggtggaaggattgcttgagcttgggaggttgagcttg------ggagtgattgcaccactgtattccagcctgggcaccaaagcaagactctaactc-a i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511531 118 - 127223203 ctagctatttggaagactaaggtggaaggattgcttgagcttgggaggttgaggctgcagtgagcagtgattgcaccactgtattccagcctgggcaccaaagcaagaacctaactc-a i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627038 112 + 1799296 ctaggtatttgggaggccaaggtggaagggttgcttgagcttgggaggttgagcttg------ggagtgattgcaccactgtattccagcctgggcatcaaagcaagaccctaactc-a i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178838 118 - 6934359 ctagctatttgggaggccaaggtggaaggattgcttgagctttggaggttgtggctgcagtgagcagtgatcgtaccacgatattccaacctgggcaccaaagcaagaccctaactc-a i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051520 93 + 128169293 ctagctacttgggaggctgaggtggaaggattgcttcagcttgaaaggtcgaggtcgcagtgaacagt-------------------------gGCAATAAAGCAAGACCCTATCCC-A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636845 93 + 18371965 ctagctatttgggaggctgaggtggaaggattgcttcagcttggaaggttgaggctgcagtgagcagt-------------------------gGCAATAAAGCAAGACCCTATCTC-C i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171852 93 - 3566421 ctagctatttgggagggtgaggtggaaggattgcttcagcttggaaagttgaggctgcagtgagcAGT-------------------------GGCAATAAAGCAAGACCCTATCCC-A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371201 93 + 9267652 ctagctatttgggaggctgaggtggaaggattgcttcagcttggaaggttgaggctgcagcgagcAGT-------------------------GGCAATAAAGCAAGACCTTATCCC-A i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 244894 66 - 1446996 I e canFam3.chr18 4077521 0 + 55844845 C e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1581040 0 - 14340318 C a score=376218.000000 s hg38.chr14_KI270725v1_random 106945 36 + 172810 aaaaaTATATATAATACAAATAAAAATCAGCTCTCA s panTro5.chr7 52594386 36 + 166211670 aaaaaTATATATAATAAAAATAAAAGTCTGCTCTCA i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654729 36 + 162613886 aaaaaTATATATAATACAAATAAAAATCAGCTCTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87200 36 + 126596 aaaaaTATATATAATAAAAATAAAAATCAGCTCTCA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678493 36 + 72422247 aaaaatatatataataaaaataaaaatCAGCTCTCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116518 36 - 99891981 aaaaaTATATATAATAAAAATAAAAGTCTGCTCTCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345341 36 + 185818997 aaaaaTACATACAATAAAAATAAAAATCAACTCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991037 36 - 192294377 aaaaaTACATACAATAAAAATAAAAATCAACTCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338312 36 - 3123512 aaaaaTACATACAATAAAAATAAAAATCAACTCTCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571575 36 - 10077455 aaaaaTACATATAATAAAAATAAAAATCAGCTCTCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511649 36 - 127223203 aaaaaTACATACAATAAAAATAAAAATCAGCTCTCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627150 36 + 1799296 aaaaatacatataataaaaataaaaaTCATCTCTCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178956 36 - 6934359 aaaaaTACATATAATAAAAATAAAAATCAGCTCTCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051613 36 + 128169293 AGAAATACACATAATTGAAATAAAAATCAGCTCTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636938 36 + 18371965 CAAAATGCATAAAATTAAAATAAAAATCAGCTGTCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171945 36 - 3566421 AAAAATACATATAATTAAAATAAAAATCAGCTCTCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371294 36 + 9267652 AAAAATACATATAATTAAAATAAAAATCAGCTCTCA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4077521 16 + 55844845 ATGAATATAGGTAATG-------------------- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 244894 66 - 1446996 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1581040 0 - 14340318 C a score=50794.000000 s hg38.chr14_KI270725v1_random 106981 4 + 172810 TTGA s panTro5.chr7 52594422 4 + 166211670 TTGA i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654765 4 + 162613886 TTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87236 4 + 126596 TTGA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678529 4 + 72422247 TTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44116554 4 - 99891981 TTGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345377 4 + 185818997 TTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991073 4 - 192294377 TTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338348 4 - 3123512 TTGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7571611 4 - 10077455 TTGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121511685 4 - 127223203 CTGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627186 4 + 1799296 TTGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5178992 4 - 6934359 TTGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20051649 4 + 128169293 TTAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636974 4 + 18371965 TTGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171981 4 - 3566421 TTGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371330 4 + 9267652 TTGA i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 244960 4 - 1446996 TTAA i dasNov3.JH578441 I 66 C 0 e canFam3.chr18 4077537 0 + 55844845 C e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1581040 0 - 14340318 C a score=4981073.000000 s hg38.chr14_KI270725v1_random 106985 426 + 172810 TTTCTACATAAATATTCACAGATGATGTCCATGTAGAAATAAATAATTATATATCTGACAATGGGT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGCTCAGTCTCATTA--ACGAATATTGATTCAATTCTACTTTCTTGTTCTAGAT-AAATTATGTAATCTAGCTTTTCGTTTCACTT----ATTTATTGATAACAACAGGAAGAATGACAAGATATCTATTCT-GGAAAATT---------ACTCTTGTAGGAGTAAAGATGAAACAAAGATAGAATTGCATGGAAAACT--------AGAAA--------AAAGTATGGTCTTCCAATAATCTATCACATCATATACAAAAGGCCTCAT-AAAACTCAGATA-TTTTATCTAAAAATGTAATTTTCATCTTAGGAATGATCAAAGCATGAGACTACAGTTGTATTA-----------AAATG-------- s panTro5.chr7 52594426 426 + 166211670 TTTCTACATAAATATGCATAGGTTATGTCCATATAGATACAAATAATAATATATCTGACAATGGGT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTCTCATTA--GTGAATAGAGATTCAATTCTACTTTCTTCTTCTAGAA-AAAATATATAATCTAGCTTTTCATTTCACTT----ATTTACTGGTAACAACAGGAAGAATGACAAGATATCTATTTT-GGAAAATT---------ACTCCGGTAGGAGTAAAGAAGAAACAATGATAGAATTGCATGGAAAACT--------AGAGA--------AAAATATGGTCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAACTCGGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCATGAGACTAGAATTGTATTA-----------CAATG-------- i panTro5.chr7 C 0 C 0 s panPan2.chr7 74654769 426 + 162613886 TTTCTACATAAATATGCACAGGTGATGTCCATGTAGACATAAATAATAATATATCTGACAATGGGT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGCTTAGTCTCATTA--ATGTATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAATTATATAATCTAGCTTTTCATTTCACTT----ACTTACTGATAACAACAGGAAGAATGACAAGATATCTATTCT-GGAAAATT---------ACTCTGGTGGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT--------AGAAA--------AAAGTATGGTCTTCCGATATTCTATCACAGCATATACAAAAGGCCTCAT-AAAATTCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCATGAGACTAGAATTGTATTA-----------CAATG-------- i panPan2.chr7 C 0 I 11631 s gorGor5.CYUI01000522v1 87240 420 + 126596 TTTCTATGTAAATATGCACAG-TGATGTCCATATAGACATAAATAATAATATTTCTGACAAT-GGT-CCATATGATCTTCAAAATGTAAAATG-CTATCTGTGTAATTGACTGGTTAGTCTCATTA--ATGAATA-AGATTCAATTCTAC-TTCTTGTTCTAGAT-AAATTATATAATCTAGCTTTTCATTTCACTT----ATTTACTGATAACAACAGGAAGAATGACAAGATATCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT--------AGAAA--------AAAGTATGGTCTTCTGATATTCTATCACATCACATACTAAAGGCCTCAT-AAAACTCAGATA-TTTTATCT-AAAATGTTATTTTCATCATAGGAATGATCAAAGCATGAGACTACAATTGTATTA-----------AAATG-------- i gorGor5.CYUI01000522v1 C 0 I 1 s ponAbe2.chrUn 5678533 427 + 72422247 TTTCTACATAAATATGCACAGGTGATGCCCATATAGACATAAAGAATAATATATCTGACAATGGGT-CCATATGATCTTCAAAATGTAAAATGCCTGTCTGTGTAATTGACTGGTTAGTCTCATTA--ATGAATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAATTATATAATCTAGCTTTTCGTTTCACTT----ATTTACTGATAACAACAGGAAGAATGACAAGATTTCTATTTT-GGAAAATT---------ACTGTGGTAGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT--------AGAAA--------AAAGTATGGTCTTCTGACATTCCATCACATCATATACTAAAGGCCTCATAAAAACTCAGATA-TGTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCATGAGACTAGAATTGTATTA-----------CAATG-------- i ponAbe2.chrUn C 0 I 4 s nomLeu3.chr17 44116558 416 - 99891981 TTTCTACATAAATATGCACGGGTGATGTCCATACAGATATAAATAATAATATATCTGACAATGGGT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGTTTCGTCTCATTA--ATGAATAGAGATTCAATTCTACTTTCTTCTTCTAGAT-AAAATATATAATCTAGCTTTTTGTTTCACTT----ATTTACT----------GGAAGAATGACAAGATATCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACGATTATAGAATTGCACGGAAAACT--------AGAGA--------AAAATATGGTCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAACTCAGATA-TTTTATCTAAACATGTCATTTTCATCTTAGGAATGATCGAAGCATGAGACTAGAATTGTATTA-----------CAATG-------- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345381 422 + 185818997 TTTTTGCACAAATATGCACAGGTGAGGTCAATGTAGGTATAAATAGTAATGTATCTGGCAACGGGT-CCATATGATCTGCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTCTCATTA--ATGTATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAAATATGTAATCTAGCTTTTCATTTCACTT----ATTCACTGATAACAAC---AAGAATGACAAGATACCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT---------GAGA--------AAAATATGATCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCGTGAGACTAGAATTGTGTTA-----------CAATG-------- i rheMac8.chr3 C 0 I 4 s macFas5.chr3 124991077 422 - 192294377 TTTTTGCATAAATATGCACAGGTGAGGTCAATGTAGGTATAAATAGTAATGTATCTGGCAACGGGT-CCATATGATCTGCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTCTCATTA--ATGTATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAAATATGTAATCTAGCTTTTCATTTCACTT----ATTCACTGATAACAAC---AAGAATGACAAGATACCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT---------GAGA--------AAAATATGATCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCGTGAGACTAGAATTGTGTTA-----------CAATG-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338352 422 - 3123512 TTTTTGCATAAATATGCACAGGTGAGGTCAATGTAGGTATTAATAGTAATGTATCTGGCAACGGGT-CCATATGATCTGCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTCTCATTA--ATGTATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAAATATGTAATCTAGCTTTTCATTTCACTT----ATTCACTGATAACAAC---AAGAATGACAAGATACCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT---------GAGA--------AAAATATGATCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCGTGAGACTAGAATTGTGTTA-----------CAATG-------- i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 7571615 422 - 10077455 TTTTTGCATAAATATGCACCGGTGAGGTCAATGTAGGTATAAATAGTAATGTATCTGGCAATGGAT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTCTCATTA--ATGTATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAAATATGTAATCTAGCTTTTCATTTCACTT----ATTCACTGATAACAAC---AAGAATGACAAGATACCTATTTT-GGAAAATT---------ACTCTGGTAAGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT---------GAGA--------AAAATATGATCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAGCTCAGATA-TTTTATCTTAAAATGTTATTTTCATCTTAGGAATGATCAAAGCGTGAGACTAGAATTGTATTA-----------CAATG-------- i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 121511689 416 - 127223203 CTTTTGCATAAATATTCACCGGTTAGGTCAATGTAGGTGTAAATAGTAATGTATCTGGCAATGGAT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTCTCATTA--ATGAATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAAATATATAATCTAGATTTTCATTTCACTT----TTTCACTGATAACAACAGGAAGAATGACAAGATACCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACAATGATAGAATTGCATGGAAAACT---------GAGA--------AAAATATGGTCTTCTGATATTCTATCACATCATCTCCTAAAGGCT----------TCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCGTGAGACTAGAATTGTATTA-----------CAACG-------- i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 627190 422 + 1799296 TTTTTGCATAAATATGCACCGGTGAGGTCAATGTAGGTATGAATAGTAATGTATCTGGCAATGGAT-CCATATGATCTTCAAAATGTAAAATGCCTATCTGTGTAATTGACTGGTTAGTTTCATTA--ATGAATATAGATTCAATCCTACTTTCTTGTTCTAGAT-AAAATATGTAATCTAGCTTTTCATTTCACTT----ATTCACTGATAACAAC---AAGAACGACAAGATACCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTAAAGATGAAACAATGATAGAGTTGCATGGAAAACT---------GAGA--------AAAATATGATCTTCTGATATTCTATCACATCATATCCTAAAGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGAATGATCAAAGCGTGAGACTAGAATTGTATTA-----------CAATG-------- i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 5178996 425 - 6934359 TTTTTGCATAAATATGCACAGGTGAGATCAATGTAGATATAAATAGTAATGTATCTGGCAATGGGT-CCATATGATCTTCAAAATGTAAAATGTCTATCTGTGTAATTGACTAGTTAGTCTCATTA--AAGAATATAGATTCAATTCTACTTTCTTGTTCTAGAT-AAAATATATAATCTAGCTTTCCATTTCACTT----ATTCACTGATAATAACAGGAAGAATGACAAGATATCTATTTT-GGAAAATT---------ACTCTGGTAGGAGTATAGATGAAACAATGATAGAATTGCATGGAAAACT---------GAGA--------AAAATATGGTCTTCTGATATTCTATCACATCACATCCTAAATGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAATGTTATTTTCATCTTAGGGATGATCAAAGCGTGAGACTAGAATTGTATTA-----------CAATG-------- i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 20051653 415 + 128169293 TTTCTACATAAATATGCACAGGCCATGTCCATATAGAAATACATA-----ATATCTGACAATGGGC-CGATATAATCTTCAAAATGTAAAATGAC----TGTGTAATTGACTGATTAGTCTTATTA--AAGAATATAGATTCAATTCTACTTTCTTGCTCTGCATAAAAATATATAATCTAGCTTTTCATATCACTT----CTTTACTGATAACAACAGGAAGAATGACAAGATATCTATTTT-GGAAATTT---------ACTCTGGTAGGAGTAAGGATGATACAGTGATAGAATTACATACAAAACT--------AGAGA--------AAAATATGGTCTTATGATAGCCTATCACAAGATATCCTATTGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAAT---ATTTTCATCTTAGGAATGATCAAAGCATGAGACTAAAATTGTATTA-----------CAATG-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17636978 421 + 18371965 TTTCTACATAAATATGCACAGGCCATGTCCATATAGATATACATA-----ATATTTGACAATGGGT-CGATATAATCTTCAAAATGTAAAATAACTATATGTGTAATTGACTGGTTAGTCTTATTC--AAGAATATAGATTCGATTCTATTTTCTTGCTCTAGATAAAAATATATAATCTAGCTTTTCATATCACTT----ATTTACTGATAACAACAGAAAGAATAACAAGATATCTATTTT-GGAAATTT---------ACTCTGGTAGGAGTAAGGATGATACAGTGATAGAATTACATGCAAAACT--------AGAGA--------AAAATATGGTCTTATGATACTCTATCACAAGACATCCTATTGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAATATAATTTTCATCTTAGGAATGATCAAAGCAAGAGA-TAAAATTGTATTA-----------CAATG-------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2171985 419 - 3566421 TTTCTACATAAATATGCACAGGCCAAGTCCATATAGATATACGTA-----ATATCTGACAATGGGT-CGACATAATCTTCAAAATGTAAAATGACTATATGTGTAACTGACTGGTTAGTCTTATTC--AAGGACATAGATTCAATTCTTCTTTCTTGCTCTAGATAAAAATATATAATCTAGCTTTTCATATCACTT----ATTTACGGATAACAACAGGAAGAATGACAAGATATCTATTTT-GGAAATTT---------ACTCTGGTAGGAGTAAGGATGATACAGTGATAGAATTACATGCAAAACT--------AGAGA--------AAAATATGGTCTTATGATATTCTATCACAAGATATCCTATTGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAAT---ATTTTCATCTCAGGAATGATCAAAGCATGAGACTAAAATTGTATTA-----------CAATG-------- i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 7371334 416 + 9267652 TTTCTACATAAATAGGCACAGGCCATGTCTATATAGAAACACATA-----ATATCTGACAATGGGT-CGATATAATTTTCAAAATGTAAAATGACTATATGTGTAATTGACTGGTTAGTCTTGTTA--AAGAATATAGATTCAATTCTACTTTCTTGCTCTAGATAAAAATATATCATCTAGCTTTTCATATCACTT----ATTTACTGAT---AACAGGAAGAATGACAAGATATCTATTTT-GGAAATTT---------ACTCTGGTAGGAGTAAGGATGATACAGTGATAGAATTACATGCAAAACT--------AGAGA--------AAAATATGGTCTTATGATATTCTATCACAAGATATCCTATTGGCTTCAT-AAAGCTCAGATA-TTTTATCTAAAAAT---ATTTTCATCTTAGGAATGATCAAAGCATGAGACTAAAATTGTATTA-----------CAATG-------- i aotNan1.NW_018514471v1 C 0 I 38 s otoGar3.GL873564 1581040 393 - 14340318 ---------------------------TCTATACAG----CAATAATAATTTTTCTGACAGTGGATGCCATATTATCTTTAAAATGTATAATGGC----TGTGTAACTGACTTGTT----TTATGA--AAGGATGTACAATTGATTCTACTTTCTTGTCTCATATGAAAACATATAATCTAGTTTTTCAT-TCACTT----ATTTACTGATAATAACAGAAAGAATGATAAGATATCCATTTTAGAAAAAAT---------AATCTGA-------AAGAATGGAACAATGATAGCATTATGTGTAAAATG---------GAGA--------AAATTATGGTCTTATAATACTCTATCTCATCATATCCTAACAGTTTCAT-TAATTTTAGGTACTTTTAACTAAAAATATTCTTTTCATCTTGGGAAAGATCAAAATATGAGACAAGAATTACATTATCTCTGTTTCCCAGTG-------- i otoGar3.GL873564 C 0 I 14 s canFam3.chr18 4077537 406 + 55844845 ---------------------------TTTATATAGATAGAAGCGACCATTTTTCTGACA-------CT-----ATCCTTAAAATATACAATAATTATCTATGTAATTGACTGAAT----TTATTA--GATAATATAGATTTTATTCTACCTTTTTGTCCCAAATACAGATATACACTCT-GTTTTTCATTTCACTTACTCATTTACAAATAATGACAGGGAAAATGGCAAAATATAGATTTT-GGAAAAACAAA-----GATTTTGGAAAAGTTAAGGAGGGAGCAATGATAGAATTATGGGCAAAACTATAAAATAAGTGA--------AGAATATGGCCAAACAATAGTCTATCACATCTCATCTTAAAAGTTTCAT-TAAGCTCAAATA-TTTTAACAAAAATTA-----TTTATTTGGGGAAAGACCAAATTATGAGAATAGAATCATATTATATCTTTCCCTCATTG-------- i canFam3.chr18 C 0 I 10 s dasNov3.JH578441 244964 454 - 1446996 TTTTTGCATAGACATAGACT--TGATGTCCAGATGGCTAGAAATGACAATTCTCCAGACAGTGGAC-CTACATTACCTTCAAGTTGTACAA---ATATTTGTGTCACTGACTGGTTAGCTTCATTAGTAGGGGTATGGATTAAATTATATTTTATTGTCCCAGCTGAAGACATATATCCTAATTTTTCACTTAACTTACCCATTTAATGTTAATGACAGGAAAAGTGATAAG------ATTTT-GGAAAACTTACTCTGTAACTCTATTAGTAGTGAGGATGTAATGATGGTGGAATTATGTGAAAAACT--------AGATATGAGTTGCAGGATATGATAGTCTAATACTGTATCACATCATGTCTTAAATATTTCTT-TAGGCTCCAACA-TTTTAAATAAAAAT--CCTTTTAATCTT-GAAAAGATCAAACTGTGAAAATAGAATTGCATTATCTCCTTCCC-CATTGCATAAATA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=273.000000 s hg38.chr14_KI270725v1_random 107411 1 + 172810 T s canFam3.chr18 4077953 1 + 55844845 T i canFam3.chr18 I 10 I 1 s dasNov3.JH578441 245418 1 - 1446996 T i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5678960 4 + 72422247 I e gorGor5.CYUI01000522v1 87660 1 + 126596 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e saiBol1.JH378145 17637399 0 + 18371965 C e otoGar3.GL873564 1581433 14 - 14340318 I e aotNan1.NW_018514471v1 7371750 38 + 9267652 I e cebCap1.NW_016107540v1 2172404 4 - 3566421 I e calJac3.chr8 20052068 0 + 128169293 C e colAng1.NW_012115910v1 5179421 4 - 6934359 I e manLeu1.NW_012105809v1 627612 4 + 1799296 I e chlSab2.chr21 121512105 4 - 127223203 I e cerAty1.NW_012000909v1 7572037 4 - 10077455 I e macNem1.NW_012011522v1 338774 4 - 3123512 I e macFas5.chr3 124991499 0 - 192294377 C e rheMac8.chr3 52345803 4 + 185818997 I e nomLeu3.chr17 44116974 0 - 99891981 C e panPan2.chr7 74655195 11631 + 162613886 I e panTro5.chr7 52594852 0 + 166211670 C a score=-17054.000000 s hg38.chr14_KI270725v1_random 107412 7 + 172810 -----GCTTGTA------ s panTro5.chr7 52594852 4 + 166211670 --------ATTC------ i panTro5.chr7 C 0 C 0 s panPan2.chr7 74666826 4 + 162613886 --------ACTC------ i panPan2.chr7 I 11631 C 0 s gorGor5.CYUI01000522v1 87661 7 + 126596 -----GCTTGTA------ i gorGor5.CYUI01000522v1 I 1 C 0 s nomLeu3.chr17 44116974 4 - 99891981 --------ACTC------ i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 124991499 4 - 192294377 --------ACTC------ i macFas5.chr3 C 0 C 0 s calJac3.chr8 20052068 4 + 128169293 --------ACTC------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17637399 4 + 18371965 --------ACTC------ i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 1581447 7 - 14340318 -----GTGACTC------ i otoGar3.GL873564 I 14 C 0 s canFam3.chr18 4077955 6 + 55844845 -----ATGACT------- i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 245419 18 - 1446996 AAACAATTTCTCTACTTG i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5678960 4 + 72422247 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e aotNan1.NW_018514471v1 7371750 38 + 9267652 I e cebCap1.NW_016107540v1 2172404 4 - 3566421 I e colAng1.NW_012115910v1 5179421 4 - 6934359 I e manLeu1.NW_012105809v1 627612 4 + 1799296 I e chlSab2.chr21 121512105 4 - 127223203 I e cerAty1.NW_012000909v1 7572037 4 - 10077455 I e macNem1.NW_012011522v1 338774 4 - 3123512 I e rheMac8.chr3 52345803 4 + 185818997 I a score=340049.000000 s hg38.chr14_KI270725v1_random 107419 33 + 172810 TCACAAACAT---AGGTGC----TAAA---------AAGGAGGGGAAAA s panTro5.chr7 52594856 33 + 166211670 TCACAAGCAC---ATGTGC----TAAA---------AAGGAGGGGAAAA i panTro5.chr7 C 0 C 0 s panPan2.chr7 74666830 33 + 162613886 TCACAAGCAC---ATGTGC----TAAA---------AAGGAAGGGAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87668 33 + 126596 TCACAAGCAC---AGGTGC----TAAA---------AGGGAGGGGAAAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5678964 37 + 72422247 TCACAAGCAC---ATGTGCTAAATAAA---------AAGGAGGGGAAAA i ponAbe2.chrUn I 4 C 0 s nomLeu3.chr17 44116978 33 - 99891981 TCACAAGCAC---ATGTGC----TAAA---------AAAGAGGGGAAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345807 33 + 185818997 TCACAAGCAC---ATGTGC----TAAA---------AAGGAGGGAAAAA i rheMac8.chr3 I 4 C 0 s macFas5.chr3 124991503 33 - 192294377 TCACAAGCAC---ATGTGC----TGAA---------AAGGAGGGAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338778 33 - 3123512 TCACAAGCAC---ATGTGC----TAAA---------AAGGAGGGAAAAA i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 7572041 33 - 10077455 TCACAAGCAC---ATGTGC----TAAA---------AAGGAGGGAAAAA i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 121512109 33 - 127223203 TCACAAGCAC---ATGTGA----TAAA---------AAGGAGGGAAAAA i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 627616 33 + 1799296 TCACAAGCAC---ATGTGC----TAAA---------AAGGAGGGAAAAA i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 5179425 33 - 6934359 TCATAAGCAC---ATGTGC----TGAA---------AAGGAGGGAAAAA i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 20052072 33 + 128169293 TCACAAGCAC---ACGTGC----TAAA---------AATAAAGGGAAAA i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17637403 33 + 18371965 TCAAAAGCAC---ACCTGC----TAAA---------AATAAAAGGAAAA i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2172408 33 - 3566421 TCACAAGCAC---ACATGC----TAAA---------AATAAAAGGAAAA i cebCap1.NW_016107540v1 I 4 I 1 s otoGar3.GL873564 1581454 29 - 14340318 TCACAAGCAC---ATATGC----TAAA---------AATAAGGAA---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4077961 31 + 55844845 --CTCCGTAC---ACATAC----TAAA---------AGTGGGGGGAAAT i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 245437 44 - 1446996 -CACATACACTGAAAATGG----TGAAAGGATGCACAAGAAAGGTAAAA i dasNov3.JH578441 C 0 I 2 e tarSyr2.KE946558v1 88970 2236 + 1121937 I e aotNan1.NW_018514471v1 7371750 38 + 9267652 I a score=2440818.000000 s hg38.chr14_KI270725v1_random 107452 211 + 172810 ---CATCACTACTGAT-ATT-TTCAATGTATGTTTTACTTTTCATCAACATG--AACCTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATGAAGAAGG--CCTGTGATATTTTATGGGAAAATAAATAAAGAAAATGCTAACAGAAACCCTATTAAGCATGAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC s panTro5.chr7 52594889 204 + 166211670 ---CATCATTACTGAT-ATT-TTAAACGTATGTTTTACTTTCCATAAACATG--AACCTCAACTTG-ATATGATGCAG--------AT----------CAAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGAAAATAAATAGAGAAAATGCTAACAGAAACCCTATT-------AA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC i panTro5.chr7 C 0 N 0 s panPan2.chr7 74666863 211 + 162613886 ---CATCATTGCTGAT-ATT-TTAAACTTATGTTTTACTTTCCATCAACATG--AACCTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATGAAGAAGG--CCTGTGATATTTTATGTGAAAATAAATAGAGAAAATGCTAACAGAAATCCTATTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87701 211 + 126596 ---CATCCTTACTGAT-ATT-TTCAACGTATGTTTTACTTTTCATCAACATG--AACCTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATGAAGAAGG--CCTGTGATATTTTATGGGAAAATAAATAGAGAAAATGCTAACAGAAACCCTATTAAGCATGAA-----------GCTTTATGGAGCAAACACAAATCCAGTGGTGAAAGATACAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679001 209 + 72422247 ---CATCATTACTGAT-ATT-TTAAACGTATGTTTTACTTTCCATCAACATG--AACCTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAACG--CCTGTGATATTTTATGGGAAAATAAATAGAGAAAATGCTAACAAAAACCCTATTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGACAC-- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117011 204 - 99891981 ---CATCATTACTGAT-ATT-TTAAACGTATGTTTTACTTTCCGTAAACATG--AACCTCAACTTG-ATATGATGCAG--------AT----------TGGAGGAAATCACCCATAATTCCATATTAAGGAAG--CCTGTGATATTTTATGGGAAAATAAATAGAGAAAATACTAACAAAAACCCTATT-------AA-----------GCTTTATGGAGCAAAGATAAATCCAGTGGTGAAAGATACAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52345840 208 + 185818997 ---CATCATTACTGAT-ATT-TAAAAACTATGTTTTACTTTCCATAAACATGC-AATTTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGA----AAATAGAGAAAATGCTAACAGAAACCCTATTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991536 208 - 192294377 ---CATCATTACTGAT-ATT-TAAAAACTATGTTTTACTTTCCATAAACATGC-AATTTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGA----AAATAGAGAAAATGCTAACAGAAACCCTATTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 338811 208 - 3123512 ---CATCATTACTGAT-ATT-TAAAAACTATGTTTTACTTTCCATAAACATGC-AATTTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGA----AAATAGAGAAAATGCTAACAGAAACCCTATTAAGCATTAA-----------GCTTTATGGAGCAAAGATAAATCCAGTGGTGAAAGATACAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7572074 208 - 10077455 ---CATCATTACTGAT-ATT-TAAAAACTATGTTTTAGTTTCCATAAACATGC-AATTTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTACGGGA----AAATAGAGAAAATGCTAACAGAAACCCTATTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512142 208 - 127223203 ---CATCATTACTGAT-ATT-TAAAAACTATGTTTTACTTTCCATAAACATGC-AATTTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGA----AAATAGAGAAAATGCTAACAGAAACCCTGTTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGTGGTGAAAGATACAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627649 208 + 1799296 ---CATCATTACTGAT-ATT-TTAAAACTATGTTTTAGTTTCCATAAACATGC-AATTTCAACTTG-ATAAGATGCAG--------AT----------TGAAGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGA----AAATAGAGAAAATGCTAACAGAAACCCTATTAAGCATTAA-----------GCTTTATGGAGCGAAGACAAATCCAGTGGTGAAAGATACAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179458 212 - 6934359 ---CATCATTACTGAT-ATT-TAAAAAGTATGTTTTACTTTCCATAAACATGC-AGTTTCAACTTG-ATATGATGCAG--------AT----------TGAAGGAAATCGCCCATAATTCCATATTAAGAAGG--CCTCTGATATTTTATGTGAAAAGAAATAGAGAAAATGCTAACAGAAACCTTATTAAGCATTAA-----------GCTTTATGGAGCAAAGACAAATCCAGGGGTGAAAGAAACAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20052106 207 + 128169293 ---CATAATTCCTTAT-ATT-TAAAATGTATGTTTTACTTTCCATACGCATGC-AGTTTCAACTTTCATATGATGCAG--------AT----------TGAGGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGCTATTTTATGGGAAAAC----AGAGAAAATGCTAACAGAAAACCTATTAAGCCTTAA-----------GCTTTATGGAGCAAAGACAAATTCA--GGTGAAAGATAAAC i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17637437 211 + 18371965 ---CATCATTCCTGAT-GTT-TAAAATGTATGTTTTACTTTCCATACACATGC-AATTTCAACTTTCATATGATGCAG--------AT----------TGAGGGAACTCACCGATAATTCCATATTAAGAAGG--CCTGTGATGTTTTATGGGAAAACAGATAGAGAAAATGCTAACAGAAACCCTATTAAGCCTTAA-----------GCTTTATGGAGCAAAGACAAATCCG--GGTGAAAGATAAAC i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2172442 210 - 3566421 ---CATCATTCCTGAT-ATT-TAAAATGTATGTTTTACTTTCCATACACATGC-AATTTCAACTTTCATATGATGCAG--------GT----------TGAGGGAAATCACCCATAATTCCATATTAGGAAGG--CCTGTGATATTTTATGGGAAAACAGATAGAGAAAATGCTAACAGAAACCCTAATTAGCTTTAA-----------GC-TTATGGAGCAAAGACAAATCCA--GGTGAAAGATAAAC i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 7371788 211 + 9267652 ---CATCATTCCTGAT-ATT-TAAAATATATGTTTTACTTTCTATACACATGC-AATTTCAACTTTCATATGATGCAG--------AT----------TGAGGGAAATCACCCATAATTCCATATTAAGAAGG--CCTGTGATATTTTATGGGAAAACCGATAGAGAAAATGCTAACAGAAACCTTATTAAGCCTTAA-----------GCCTTATGGAGCAAAGACAAATCCA--GGTGAAAGATAAAT i aotNan1.NW_018514471v1 I 38 C 0 s otoGar3.GL873564 1581483 194 - 14340318 ---CATCATTACTAATAATT-CTAAAATTATGTTTTTGATTCTGTAAGCATGT-AATTTAAACTTA-ATATGGTG--------------------------------------AT-ATTCCATTATCACAAGGAATATTTGATATTCTATGGGAAACTAAGCAGAAAAAATACTAACAGAAACCCCATTAAGCATCAA-----------GCTTAAGGAAGCAAAGTCAAAACCACTGGTGAAACATGTGC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4077993 184 + 55844845 ---TATCATCACTGAA-ATTAGGAAAGTTATATTTCACATTCTATAAGCATGTGGGTTTTAAATTG-ATATGGGGCAGGTGAAGAAAT----------TGAAGAAAATTACCCATGATTCCACACTTAGAAAA--ACTGAAATAT--TATGGGAAATTAAATGGAAAAAA-------AAAAACACT----------AA-----------GCTTAATGGCACAAAGACAAAT------------------- i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 245483 217 - 1446996 AGGCACCAGAATT----ATA-GAAAATATACTTTTCACATATCAGGGACATGT-GATTTCAAATGC-ATATGGAATAG--------ATGAGATCAGAATGAAGAAAATCACCCATGTTCCCATGCTAAGAAAA---ATGTGAAGTTTTGTGAGAAATTAAAGAGAAAATAT-CTGACAGAAACC---TTAAGAATTAACAGAAGCAAAGGC----TGGAGCTAAGACAAATCCAAGGGTGAAA------- i dasNov3.JH578441 I 2 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=529758.000000 s hg38.chr14_KI270725v1_random 107663 50 + 172810 ACTC-GAGTTCTGTTTGTTGTCTTGGAACAATACGGTTTAGAG-GTGACTGG s panTro5.chr1 126669038 49 + 228573443 ACTC-GAGTTCTGTTTGTTG-CTTGGAACAATACGGTTTAGAG-GTGACTGG i panTro5.chr1 N 0 C 0 s panPan2.chr7 74667074 50 + 162613886 ACTC-GAGTTCTGTTTGTTGTCTTGGAACAATACGGTTTAGAG-GTGACTGG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87912 50 + 126596 ACTC-GAGTTCTGTTTGTTGTCTTGGAACAATACGGTTTAGAG-GTGACTGG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679210 50 + 72422247 ACTC-CAGTTCTGTTTGCTGTCTTGGAACAATACGGTTTAGAG-GTGACTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117215 50 - 99891981 GCTC-AAGTTCCGTTTGTTGTCTTGGAACAATACGGTTTAGAG-GTGACTGG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346048 50 + 185818997 ACTC-GAGTTCTGTATATTGTCTTGGAACAACAGGGTTTAGAG-ATGACTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991744 50 - 192294377 ACTC-GAGTTCTGTATATTGTCTTGGAACAACAGGGTTTAGAG-ATGACTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339019 50 - 3123512 ACTC-GAGTTCTGTATATTGTCTTGGAACAACAGGGTTTAGAG-ATGACTGG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7572282 50 - 10077455 ACTC-GAGTTCTGTATATTGTCTTGGAACAATAGGGTTTAGAG-ATGACTGG i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 121512350 50 - 127223203 ACTC-AAGTTCTGTATGTTGTCTTGGAACAATAGGGTTTAGAG-ATGACTGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627857 50 + 1799296 ACTC-GAGTTCTGTATATTGTCTTGGAACAATAGGGTTTAGAG-ATGACTGG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179670 50 - 6934359 ACTC-GAGTTCTGTTTGTTGTCTTGGAACAATAGGGTTTAGAG-GTGACTGG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20052313 49 + 128169293 ACTC--ATTTCTGTTTGTTGTCTTGGAACAATAGGGTTTAGAG-GTGGCGAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17637648 49 + 18371965 ACTC--ATTTCTGTTTGTTGTCTTGGAACAATAGGGTTTAGTG-GTGGCAAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2172652 49 - 3566421 ACTC--ATTTCTGTTTGTCGTCTTAGAACAAGAGGGTATAGAG-GTGGCAAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7371999 49 + 9267652 ACTC--ATTTCTGTTTGTTGTCTTGGAACAATAGGGTTTAGTG-GTGGCAAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1581677 50 - 14340318 GCTCAAAGTGCTGTTTGTGGTCCCCAAACAGTAGGATTTAGAA-G-GACTAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4078177 44 + 55844845 GCTC--AGTGCTGTTTGTTGTCTTGGAGCAGTAGAGTTTAGAGTGT------ i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 245700 20 - 1446996 -------------------------------TTGGATTTAGAG-CTATTAGG i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I a score=20858.000000 s hg38.chr14_KI270725v1_random 107713 4 + 172810 C-GGG- s panTro5.chr1 126669087 5 + 228573443 CAGGG- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667124 4 + 162613886 T-GGG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87962 4 + 126596 C-GGG- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679260 4 + 72422247 T-GGG- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117265 4 - 99891981 T-GGG- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346098 4 + 185818997 T-GGG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991794 4 - 192294377 T-GGG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339069 4 - 3123512 T-GGG- i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 121512400 4 - 127223203 T-GGG- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627907 4 + 1799296 T-GGG- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179720 4 - 6934359 T-GGG- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20052362 4 + 128169293 T-GAG- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17637697 4 + 18371965 T-GAG- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2172701 4 - 3566421 T-GAG- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7372048 4 + 9267652 T-GAG- i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4078221 4 + 55844845 T-AGG- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 245720 5 - 1446996 -AGAGG i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1581727 0 - 14340318 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I a score=48092.000000 s hg38.chr14_KI270725v1_random 107717 14 + 172810 TGAG---GAGAA-CATAT s panTro5.chr1 126669092 15 + 228573443 TGAGC--GAGAA-CATAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667128 14 + 162613886 TGAG---GAGAA-CATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87966 14 + 126596 TGAG---GAGAA-CATAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679264 14 + 72422247 TGAG---GAGAA-CATAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117269 14 - 99891981 TGAG---GAGAA-CATAT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 124991798 14 - 192294377 ----TCCAAGAATCatat i macFas5.chr3 C 0 C 0 s calJac3.chr8 20052366 14 + 128169293 TGAG---GTGAA-TGTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17637701 14 + 18371965 TGGG---GAGAA-TGTAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2172705 14 - 3566421 TGAG---GAGAA-TGTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7372052 14 + 9267652 TGAG---GAGAA-CGTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1581727 8 - 14340318 ---------GAA-CATAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4078225 13 + 55844845 TGA----TAAAA-CATGT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 245725 14 - 1446996 ATAG---GAGAA-CATGT i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e rheMac8.chr3 52346102 0 + 185818997 C a score=655504.000000 s hg38.chr14_KI270725v1_random 107731 173 + 172810 GCGAGTTCACCAAA-GAGAAAAGTTGAATGAGGCAATGCCTCTTCCTGACCATATCTCTTACTCA-GATAACTATATAATTTATTGCCCAGTAAAGGGTA----TATTAAAAAA--TCATATTAAAA--G--TCATGCAGTGAAGTTGTCCAGGGAAATCAAGACTT-AACAGTCTCACTCTGACA s panTro5.chr1 126669107 175 + 228573443 GGCGGTTCACCAAAAGAGAAAAGCTGAATGAGGCAATGCCCTCTTCTGACCATATCTCTTACTCATGATAACTATAGAATTTATTGTCCAG--AAGGTAT----TATTAAAAAAAATCATATTAAAA--G--TCATACAGTGAAGT-GTCCAGGGAAATCAAGACTTGAACAGTCTCACTCTGACA i panTro5.chr1 C 0 I 10 s panPan2.chr7 74667142 173 + 162613886 GCAAGTTCACCAAA-CAGAAAAGCTGAATGAGGCAATGCCTCTTCCTGACCATGTCTGTTACTTA-GATACCTATATAATTTATTGTCCAGTAAAGGGTA----TATTTAAAAA--TCATATTAAAA--G--TCATGCAATGAAGTTGTCCAGGGAAATCAAGACTT-AACTGTCTCACTCTGACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 87980 172 + 126596 GCGAGTTCACCAAA--AGAAAAGCTGAATGAGGCAATGCCTCTTCCTGACCATATCTCTTACTCA-GATAACTATATAATTTATTGTCCAGTAAAGGGTA----TATTAAAAAA--TCATATTAAAA--G--TCATGCAGTGAAGTTGTCCAGGGAAATCAAGACTT-AACAGTCTCACTCTGACA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679278 173 + 72422247 GCGAGTTCACCAAA-CAGAAAAGCTGAATGAGGCAATGCCTCTTCCTGACCATATCTCTTACTCA-GATAACTATATAATTTATTGTCCAGTAAAGGGTA----TATTTAAAAT--TCATATTAAAA--G--TCATGCAATGAAGTTGTCCAGGGAAATCAAGACTT-AACAGTCTCACTCTGACA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117283 173 - 99891981 GCGAGTTCACCAAA-CAGAAAAGCTGAATGAGGCAATGCCTCTTCCTGACCATATCTCTTACTCA-GCTAACTATATAATTTATTGTCCAGTAAAGAGTA----TATTTAAAAA--TCACATTAAAA--G--TCATGCAATGAAGTTGTCCAGGGAAATCAAGACTT-AGCAGTCTCACTCTGACA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20052380 149 + 128169293 GTGAGTTCACCAGA-TAGAAAAGCTCTATGAGGCAATGCCTCTTGCTGGACATATCTCTTACTCA-GGTAACCATATAATTTATTGTCCAGTAAAGGGTA----TATTTAAAAA--TCATATTAGAA--G--TCATGCAATGAAGT--------------------T-----GTCTCACTCTGCCC i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17637715 149 + 18371965 GTGAGTTCACCAGA-CAGAAAAGCTCTATGAGGCAATGCCTCTTGCTGGATGTATCTCTTACTCA-GGTAACCACATAATTTAATGTCCAGTAGAGGGTA----TATTTAAAAA--TCATATTAGAA--G--TCATGCAATGAAGT--------------------T-----GTCTCGCTCTGCCC i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2172719 146 - 3566421 GTGAGTTCACCAGA-TAGAAAAGCTCTATGAGGCAATGCCTCTTGCTGGACATATCTCTTACTCA-GGTAACCATATAATTTATTGTCCAGTAAAGGGTA----TATTTAAAAA--TCATATTAGAA--G--TCATGCAATGAA----------------------------ATCTCACTCTGCCC i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 7372066 149 + 9267652 GTGAGTTCACCAGA-TAGAAAAGCTCTATGAGGAAATGCCTCTTGCTGGACATATCTCTTACTAA-GGTAACCATACAATTTATTGTCCAGTAAAGGGTA----TATTTAAAAA--TCATATTAGAA--G--TCATGCAATGAAGT--------------------T-----GTCTCACTCTGCCC i aotNan1.NW_018514471v1 C 0 I 1 s otoGar3.GL873564 1581735 174 - 14340318 ATGAGTTCATCCAA-CAGAAAA-CTGTACGAGGCCCTGCTTCTTCCTGACCGTATCTCTTACTCA-GATAGCCACATAATTTATTTTCCCATCTGGGACA----CATTTGAAAA--TTGTATTGAAA--TACTCATACAGTGAGGTTGTCCTGGGAAATCAAGACTT-GGCAGTCTCCGTCTACCC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4078238 160 + 55844845 GTGA-CTCACTGGA-TAGAAAGTTGGTATGAGGTAA-GTTTCCTCCTGCCTGGATTTCTAGCTCA-GATAGCCACAAAACTTATCATACAAAATGGAGCA----TACTTAAAAA--TTA-------------TTCTACAGTGAAGCTATCCTAGGAAATGAAGATTT-GG--ATTTCACTCTGCCC i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 245739 178 - 1446996 GTAGCTTCCCCAAA-TAAAGAATCTGTGTAAGGCAATGCTTCTTCCTGTTTATATTTCTTGCTCA-GGTGACCATAAAATGTACTGTCCAAAATGGAGCAATTTAATTGGAGAA--TTAAATTACAGCTG--TCTTAAAGTGAAGGTGTCCT-GGAAATTAGGATAT-GGCGGTCTCACTTTGACT i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=30063.000000 s hg38.chr14_KI270725v1_random 107904 6 + 172810 ATAATG s panPan2.chr7 74667315 6 + 162613886 ATAATG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88152 6 + 126596 ATAATG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679451 6 + 72422247 ATAATG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117456 6 - 99891981 ATAATG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20052530 6 + 128169293 ATAATG i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17637865 6 + 18371965 TTAATG i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2172866 6 - 3566421 ATAATG i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 7372216 6 + 9267652 ATAATG i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 1581909 6 - 14340318 ATAATG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4078398 6 + 55844845 ATAATG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 245917 6 - 1446996 CTCATG i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C e panTro5.chr1 126669282 10 + 228573443 I a score=794484.000000 s hg38.chr14_KI270725v1_random 107910 230 + 172810 -------------AACAG-------------GGGAATTCCCT---------------------------CAAG-ATAGACT-AG-GACATGACTCCACACTGGCAGG-TAGTAGTACCAGAAAAGAACCC-ATGGAAAATCTTTAC--CTTATGCT-TGAGGT-AGG-GACCAGGC--TAAAGTGAAAGC-CAGACATAAAATTCTATCTAAAAT-AAATCCACAATCGAAGAAAATATGTGGTGTAC--AGGCATAAAATGTCTTTACTGG--ATCATTGAAATAGTAAGATAAATTCAA s panTro5.chr1 126669292 240 + 228573443 -------------AACAG-------------GGGAATTCCCT---------------------------CAAG-ACTGACTTAGCGACATGAC-CCACACTGCCAGGGTAGTAGTACCAAAAAAGAATGCGATGGAA--TCTTTAC--CTTATGCTATGAGGTTAGGCGACCAGGCCCTAAAGTGAAAGCACAGACCTAAAATTCTATCTAAAATTAAATCCCAACTCAAAGAAAATATGTGTTACACCCAGGCATAGAATGTCTTTACTGCCCATCAT-GAAAT-GAAAGATAAATTCAA i panTro5.chr1 I 10 C 0 s panPan2.chr7 74667321 230 + 162613886 -------------AATAG-------------GGGGATTCCCT---------------------------CAAG-ATAGACT-AG-GACATGAGCCCACACTGGCAGG-TAGTAGTACCAGAAAAGAACCT-ATGGAAAATCTTTAC--CTTATGCT-TGAGAT-AGG-GACCAGGC--TAAAGTGAAAGC-CAGATATAAAATTTTATCTAAAAT-ATATCCACAATGGAAGAAAATATGTGGTGTAC--AGGCATAGAATGTCTTTACTGG--ATCATTAAAATAGTAAGATAAATTCAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88158 230 + 126596 -------------AACAG-------------GGGGATTCCCT---------------------------CAAG-ATAGACT-AG-GACATGACCCCACACTGGCAGG-TAGTAGTACCAGAAAAGAACGC-ATGGAAAATCTTTAC--CTTATGCT-TGAGGT-AGG-GACCAGGC--TAAAGTGAAAGC-CAGACCTAAAATTCTATCTAAAAT-AAATCCACAATCAAAGAAAATATGTGGTGTAC--AGGCATAGAATGTCTTTACTGG--ATCATTGAAATAGTAAGATAAATTCAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679457 230 + 72422247 -------------AATAG-------------GGGGGTTCCCT---------------------------CAAT-ATAGTCT-AG-GACATGACCCCACACTGGCAGG-TAGTAGTACCAGAAAAGAACCC-ATGGAAAATCTTTAC--CTTATGCT-TGAGGT-AGG-GACCAGGC--TAAAGTGAAAGC-CAGACATAAAATTCTATCTAAAAT-ATATCCACAATCAAAGAAAATATGTGGTGTAC--AGGCATAGAATGTCTTTACTGG--ATCATTGAAATAGTAAGATAAATTCAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117462 230 - 99891981 -------------AACAG-------------GGGGGTTCCCT---------------------------CAAG-ATAGACT-AG-GACATGACCCCACATCGGCAGG-TAGTAGCACCAGAAAAGAACCC-ATGGAAAATCTTGAC--CTTATGCT-TGAGGT-AGG-GACCAGGC--CAAAGTGAAAGC-CAGACATAAAATTCTATCTAAAAT-ATATCAATAATCGAAGAAAATATGTGGTGTAC--AAGCATAGAATGTCTTTACTGG--ATCATTGGAATAGTAAGATAAATTCAA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20052536 256 + 128169293 -------------AACAG-------------GGGTGTTCCCTCATTCATTGGACTAGGTGTCCCTAGTCCAAG-ACAGATG-AG-GACATGACCCCACACTGGTAGG-CAGTAGTACAAGAAAAGAACCC-ACCAGAAGTCTTTAC--TATATAGT-TGAGGT-AGA-GACCAGAC--CAAAGTGAAAG--CAGATATGAAATTCTATCTAAACT-ATATTAACAATCGAAGAAAATATGTGGTTTAC--AGGTGTGGAATATCTCTAATAG--ATCAATGAAATAGTATGATAAATTCAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17637871 215 + 18371965 -------------AACAG-------------GGGGATTCCCT---------------------------CAAG-ATAGACT-AG-GACATGACCCCAAACTGGTAGA-TAGTAGTACCAGAAAAGAACCC-ACCGGAAGTCTTTAC--TATATAGT-CGAGGT-AGA-GACCAGAT--CAAAGTAAAAG--CAGACATGAAATTCTATCCAAAAT-ATATTAACAGTCGAAGAAAATATGTGGTGTAC--AGGC--------------ATAG--ATTGATGAAATTGTACGATAAATTCAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2172872 229 - 3566421 -------------AACAG-------------GGGAGTTCCCT---------------------------CAAG-ATAGGCT-AG-GACATGACCCCACACTGGTAGA-TAGTAGTACCAGAAAAGAACCC-ACCATAAGTCTTTAC--TATATAGT-TGAGGT-AGA-GACCAGAT--CAAAGTGAAAG--CAGACACGAAATTCTATCTAAAAT-ATATTAACAATCGAAGAAAATGTGTGGTGTAC--AGGCATAGAATGTCTCTAACAG--ATCAATGAAATAGTATGATAAATTTGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7372222 229 + 9267652 -------------AACAG-------------GGGGGTTCCCT---------------------------CAAG-ATAGACT-AG-GACATGACCCCACACTCGTAGA-TAGTAGCACCAGAAAAGAACCC-ACCAGAAGTCTTTAC--TATATAGT-CGAAGT-AGA-GACCAGAC--CAAAGTGAAAG--CAGACATGAAATTCTATCTAAAAT-ATATTAACAACCGAAGAAAATATGTGCTGTAC--ATGTATGGAATGTCCCTAATAG--ATCAATGAAATAGTATGATAAATTCAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1581915 222 - 14340318 -------------AACAGTGTTCCCCAGCA-GAGGGTTCCCT---------------------------GAGG-ACAGATC-AG-GACATGACCGCAAACC-------------TACCAGAAAATAACCC-ACAGGAAG-CTGTGT--TGTGCACT-GGAGGT-AGA-GACCAGGC--C-AAGAGAAAAC-CAGGCATGGAATTTTAACCAAAAT-ACATCAACAATTGAAGAAAATGTGCAG-------AGAAATAGAATGCTGCTGTTGG--ACTGGCAAAGCGGT-TGATCAGTTTAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4078404 229 + 55844845 -------------AACAG-TTTCTCCACCATCAGACTTCCCT---------------------------ACAG-ATGGGTC-AG-GATGTGCCCACAGACCTGCAGG-CAGTGGT-TCAGAACATAAC---AGGGAAAG-CCACAC--TGCAGCTG-TGAGGT-AGA-GACTGGGC--CACA---------CAGAAACCAGATTCTACGTAAGAC-GTATCAACAATCAGAG-AAATTCATAGTGTAA--AGGGAAAAAATGTCACTACTGG--ATCAATGGAACTGTAAGGTAAATCCAA i canFam3.chr18 C 0 I 2140 s dasNov3.JH578441 245923 243 - 1446996 AATTGTGCTGTCCAGCAC-------------AAGGGCTCCCC---------------------------CAGGAATGTGTC-AC-ACCACAACCACAGACAAGAGGC---GGAGGATGTGGACAGCACCC-AGAGACGG-CCACACGGTGTGTGCT-CAAGGT-CGA-CACCACAC--CACGGAGAGAGC-TGGAACGAGACTTCTTGCTAAAAC-CTATCAACAGCTGAAGAAAATACATAATGTAT--GTAAATAAAATGCTACTGCAGG--ACCAATAGCATATCAGAATGAACCCAA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=6909.000000 s hg38.chr14_KI270725v1_random 108140 5 + 172810 CTTTT- s panTro5.chr1 126669532 5 + 228573443 CTTTT- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667551 5 + 162613886 CTTTT- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88388 5 + 126596 CTTTT- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679687 5 + 72422247 ATTTT- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117692 5 - 99891981 ATTTT- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20052792 5 + 128169293 ATTTT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17638086 5 + 18371965 ATTTT- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2173101 5 - 3566421 ATTTT- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7372451 5 + 9267652 ATTTT- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1582137 5 - 14340318 AAAGA- i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 246166 5 - 1446996 -TTATT i dasNov3.JH578441 C 0 I 3 e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=894221.000000 s hg38.chr14_KI270725v1_random 108145 304 + 172810 TACAT-tgttttcttttcctc-cagtta--gggcttgaggtttgtctctggaga--gtgactgtcaa-ttggagc---cc-tgc-ctttctggggttct-ggtcagggca--ttgtggatgctta----acatg----tgcc-tttca--caggacacttccttacccc-agca--gtggcc-aggtgtgca---ccccacgaccaggcctccctctcacagaacatctgttgagactaggagatg-cct--ggtgactgttgcctgacctgtgtactgtgtatttctgaca--agagccact--ctca-gagaccctggccagg-------aggagagttaggttccagtg s panTro5.chr1 126669537 326 + 228573443 TACAG-TTTTTTTTTTGTCTCTCAGTTATGGCGcttgaggtt-gtctctgtagatagtgactgtcga-tgtgagc---ccctgcgcgttctggggttctaggtcaggggaggttgtggacgctta-----catgatgatgccctttcaacgaggacacttcct-acccc-agcaatgtggcctaggtgtgca---tgcc-caac--agcctccttatcac-gaacatctgttgagactaggagatg-cctaaggtgactgttgc-tgacctgtgtcctgtgtatttctg-ca--agagccact-actcaagagaccctggccagggagcaggaggagagttaggttccagtg i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667556 305 + 162613886 TACAT-tgttttcttttccttccagtta--gggcttgaggtttgtctctggaga--gtggctgtcaa-ttggagc---cc-tgc-ctttct-gggttct-gggcaggggg--ttgtggatgctta----acatg----tgcc-tttca--caggacacttccttacccctagca--gtggcc-aggtgtgca---tctcacgaccaggcctccctctcacagaacatctgttgagactaggagatg-cct--ggtgactgttgcctgacctgtgtcctgtgtatttctgaca--agagccact--ctca-gagaccctggccagg-------aggagagttaggttccagtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88393 302 + 126596 TACAT-tgttttcttttcctc-cagtta--gggcttgaggtttgtctctggaga--gtgactgtcaa-ttggagc---cc-tgc-ctttctggggttct-ggtcaggggg--ttgtggatgctta----acatg----tgcc-tttca--caggacacttccttaccc--agca--gtggcc-aggtgtgca---tcccacgaccaggcctccctctcacagaacatctgttgagactaggagatg-cct--ggtgactgttgcctgacctgtgtcctgtgtatttctgaca--agagccact--ctca-gagaccctggccagg-------aggagagtta-gttccagtg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679692 296 + 72422247 TACAT-tgttttattttcctc-cagtta--gggcttgaggtttgtctctggata--gtggctgtcag-ttggagc---cc-tgc-ctttctggggttct-gggcaggggg--ttgtggatgctta----atatg----tgcc-attca--caggacacttccttacac--agca--gtggcc-aggtgtgca---tcccacgaccaggcctccctctcacagaacatctgttgagactaggagagg-cct--ggtggctgttgcctgacctgtgtcctgtgtatttctgaca--agagccact--ctca-gagaccctggccagg-------agcagagttaggt------- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44117697 298 - 99891981 TACAC-tgttttattttcctt-cagtta--ggggttgaggtttgtctctggaga--gtggctgtcaa-ttggagc---cc-tgc-ctttttggggttct-gggcaggggg--ttgtgcatgctta----acatg----tgcc-tttta--caggacacttcctta-----a--a--gtggcc-aggtatgta---tcccacgaccaggcctccctctcacagaccatctgttgagactaggagatg-cct--ggtggctgttgcctgacctgtgtccagtgtatttctgaca--agagccact--gtca-gagaccctggcaagg-------aggagagttaggttccagtg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20052797 291 + 128169293 TACAC-tgttttattttcctc-taatta--gggcttgaggtttgtgtctggaga--gtggctgtaaa-ttcaagc---cc-ttc-ctttctggggttct-gggcaggtgg--ttgtggatgctta----gcata----tgcc-tttca--caggacacttcctcacccc-ggca--gggtcc-atgtctgca---tcccacaac---------------cagaatatccattgaaactagcaggtg-cct--ggatgccattgtctgacctgtatccagtgtatttctgacaagagagccact--ctca-gagaccctggccagg-------aggagagttaggttccagtg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17638091 291 + 18371965 TACCT-Ggttttattttcctc-taatta--gggcttgaggtttgtgtctggaga--gtggctgtaaa-ttcaagt---cc-tgc-ctttctggggttct-tggcaggtgg--ttgtggatgctta----gcatg----tgcc-tttca--caggacacttcctcaccct-gaca--gaagct-aggtgtgca---tcccacaat---------------cagaatatccgttgagactagcagttg-cct--ggagaccattgtctaatcagtatccagtgtatttctgacaagagagccact--ctca-gagaccctggccagg-------aggagagtaaggttccagtg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2173106 291 - 3566421 TACCT-Agttttattttcctc-taatta--gggcttgaggttggtgtctggaga--gtggctctaaa-ctcaagc---cc-tgc-ctttctggggttct-gggcaggtgc--ttgtggatactta----gcatg----tgcc-tttcg--caggacacttcctcatccc-gaca--gggtcc-aggtgtgca---tcccacaac---------------tagactatccgttgagaccagcaggtg-cct--ggaggctgttgtccgacctgtatccggtgtatttctgacaagagagccact--ctca-gagaccctggccagg-------aggagagttaggttccggtg i cebCap1.NW_016107540v1 C 0 I 9 s aotNan1.NW_018514471v1 7372456 295 + 9267652 TACCT-Agttttattttcctc-taatta--gcgcttgaggtttgtgtctggaga--gtggctataat-ttcaagc---cc-cgc-ctttctggggttct-gggcaggtgg--ttgtggatgcttagcatgcatg----tgcc-tttca--caggacacttcctcacccc-gaca--ggggcc-aggtgtgca---tcccacagc---------------cagaatatccgttgagactagcaagtg-cct--ggaggccattgtctgacctgtatccagtatatttctgacaagagagccact--ctca-gagaccctggccagg-------aggagagttaggttccagtg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1582142 302 - 14340318 TTCATGAgttttatttccctc-taatca--ggtctcgctgtctctctctcgaaa--atggttgttaagtgccagccagcc-tgc-tttgatggggctct-------------tggag--tgtcca----cagtg----aacc-ttccg---ggggtgcttcctcatcct-ggcag-gtagct-acttcagagaacccccacgaccaggtgtcc-tgtcacaggaaacttgtttatgctgacaggtgccct--tgtcattcttgtctgactcatgcccagggtattctttcca--gacacccctcactag-gagaccctgactggg-------aggagagttgggttcttgtg i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 246171 3 - 1446996 I e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=14952.000000 s hg38.chr14_KI270725v1_random 108449 9 + 172810 --taggtcagc s panTro5.chr1 126669863 9 + 228573443 --taggtcagc i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667861 9 + 162613886 --taggtcagc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88695 9 + 126596 --taggtcagc i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44117995 9 - 99891981 --taggtcaga i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20053088 9 + 128169293 --caggtcata i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17638382 9 + 18371965 --caggttgta i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7372751 9 + 9267652 --caggttgta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1582444 11 - 14340318 tattggtcaga i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5679988 0 + 72422247 C e dasNov3.JH578441 246171 3 - 1446996 I e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e cebCap1.NW_016107540v1 2173397 9 - 3566421 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=174445.000000 s hg38.chr14_KI270725v1_random 108458 48 + 172810 tcagacacatggaggccacaggaccaaacatgggaaatcaca-gaagtg s panTro5.chr1 126669872 48 + 228573443 tcagacacatggaggccacagaaccaaacatgggaaatcaca-gaagta i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667870 48 + 162613886 ttagacacatggaggtcacaggaccaaacatgggaaatcaca-gaagtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88704 48 + 126596 tcagacacatggaggccacagaaccaaacatgggaaatcaca-gaagta i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5679988 37 + 72422247 -----------gtggccacaggaccaaacatgggaaatcaca-gaagta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44118004 48 - 99891981 tcagacacatggaggccacaggaacaaacatgggaaatcaca-gaagta i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20053097 48 + 128169293 tcagacacatggaggccacaggaccaaacatgggaaatcaca-gaaaca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17638391 48 + 18371965 tcagatatatggaggccacaggaccaaacatgggaaatcaca-gaaaca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2173406 48 - 3566421 tcaggcacatggaggccacaggaccaaacatgggaaaccaca-gaaaca i cebCap1.NW_016107540v1 I 9 C 0 s aotNan1.NW_018514471v1 7372760 48 + 9267652 tcagacacatggaggccacaggaccaaacatgggaaatcaca-gaaaca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1582455 40 - 14340318 ---------caagtcccaaagcaggaagcacaagaaagcacatggagtg i otoGar3.GL873564 C 0 I 1507 e dasNov3.JH578441 246171 3 - 1446996 I e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=1363691.000000 s hg38.chr14_KI270725v1_random 108506 426 + 172810 gttttattactcacagatccagagagaagagggtagcTGAGAAGAGggtttagctgtgtccccagccaaatctcatcttgaactcccacatgttgtgggacggaacaggttggaggaaattgaatcatgggggcaggtctttcccatgctgttcttctgagagtgaataagtctcacaagatctgatggttttataaagaggagtttccctgcataagctctcttgtcttgtctgctgccatgtgagacgtgcc-tttcaccttctgccatgattgtgtggccta-cccagacatgtggaactgtgcgtctattaaacctctttcttctggaaattacccagtcttgggcatgtctttaccggtggtgtgaaaatggactaatacaGTAGCACACCTCATAGGGCTGAACAAAATGGG-AAGAcgagtg s panTro5.chr1 126669920 427 + 228573443 ggtttattactcacagatccagagagaagagggtagcTGAGAAGAGggtttagctgtgtccccagccaaatctcatcttgaattcccacatgttgtgggagggaacaggtgggaggtaagtgaatcatgggggcaggtctttcccatgctgttcttctgatagtgaataagtctcacaagaactgatggttttataaaggggggtttccctgcacaagctctcttgtcttgtctgctgccatgtgagacgtgcc-ttttagcttgcgccatgattgtgaggccta-cccagccatgtggaactgtgcgtctattaaacctctttcttctggaaattacccagtcttgggcatgtctttaccggtggtgtgaaaatggactaatacaGTAGCACACCTCATAGGGCTGAACAAAATGGGGAAGATgagtg i panTro5.chr1 C 0 C 0 s panPan2.chr7 74667918 423 + 162613886 g-tttattactcacagatccagagagaagagggtagcTGAGAAGAGAgtttagccgtgtcctcagccaaatctcatcttgaattcccacatgttgtgagagggaacaggttggaggtaattgaatcgtggggacaggtctttcccacgctgttcttctgatagtgaataagtctcacaagatctgatggttttataaaggggagtttccctgcacaagctc-----tcttgtctgctgccacgtgagacatgcctttttaccttgcgccatgattgtgaggcctaccccagccatgaggaaccgtgcgtctattaaacctctttcttctggaaattacccagtcttgggcatgtctttaccggtggtgtgaaaatggactaatacTGTAGCACACTTCATAGGGATGAACAAAATGGGGAAGgcgagtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 88752 422 + 126596 ggtttattactcacagatccagagagaagagggtagcTGAGAAGAGggtttagctgtgtccccagccaaatctcatcttgaattcccacatgttgtgggagggaacaggtgggaggtaattgaatcatgggg-caggtcttt-ccatgctgttcttctgatagtgaataagtctcacaagatctgatggttttataaaggggagtttccctgcacaagctctcttgtcttgtctgctgccatgtgagacgtgcc-tttcagcttgc-ccatgattgtgaggccta-cccagccatgtggaactgtgcatctattaaacctctttcttctggaaattacccagtcttgggcatgtctttaccggc-gtgtgaaaatggactaatacaGTAGCACACCTCATAGGGCTGAACAAAATGGG-AAGATgagtg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5680025 418 + 72422247 gttttattactcacagatccagagagtagagggtagcTGAGAAGAGggtttagctgtgcccccagccaaatctcatcttgaattcccacatgttgtgggagggaacaggtgggaggtaattgaatcatgggggcaggtctttcccatgctgttcttctgatggtgaataagtctcacaagatctgatggttttatacaggggagtttccctgcacaaactc-----tcttgtctgctgccatgtgagacgtgcc-tttcaccttccaccatgattgtgaggccta-cccagccatgtggaactg----tctattaaacctctttcttctggaaattacccagtcttgggcatgtctttaccagcggtgtgaaaatggactaatgcaGTAGCACACCTCATAGGGCTGAACAAAATGGGGAAGATgagtg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44118052 422 - 99891981 gttttattactcacagatccagagagaagagggtagcTGAGAAGAGggtttggctgtgtccccagccaaatctcatcttgaattcacacatgttgtgggagggaacaggtgggaggtaattgaatcctgggggcaggtctttcccatgctgttcttctgatagtgaataagtctcacaagatctgatggttttataaaggagggtttccttgcacaagctc-----tctcgtctgctgccacgtgagatgtgcc-tctcaccttccaccatgattgtgaggccta-cccagccatgtgcaactgtacatctattaaacctctttcttctggaaattacacagtcttgggcatgtttttatcggcagtgtgaaaatggactaatacaGTAGCACACGTCATAGGGCTGAACAAAACAGGGAAGATAAgta i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20053145 423 + 128169293 gttttattactcacagatccagagagaagagggtagttgatatg---gtttggctgtgtccccagccaaatctcatcttgaattcccacatattttgggagggacagggtgggaagtaactgaatcatggaggcaagtctttcccatcctgttattgtgatattgaataagtctccgaagatctgatgcttttataaaggggaggttctctgcacaagctctcttctcttgtctgctgccaggtggaatgtgcc-tttcaccttccaccatgattgtgaggcctc-cccagccatgtggaa-tgtgagtctgttaaacctgtttcttctgtaaattcctcattcttgggcatgtctttatgggcagtgtgaaaacggactaatacagtaacatacctcatagggctgaacaaaatgaggaagatgagtg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17638439 423 + 18371965 gttttattactcacagatccggagagaagagggtaggtgatatg---gtttggctgtgtccccagccaaatctcatcttgaattcccatatattttgggagggacagggttggaagtaactgaatcatgggggcaggtctttctcatcctgttcttgtgatattgaataagtctcccaagatctgatgcttttataaaggggagttgccctgcacaagctctcttctcttgtctgctgccacgtgagacatgcc-tttcaccttctgccatgattctgaggcctc-cccagccatgtggaa-tctaagtctgttaaacctctttcttctgtaaattcctcagtcttgggcacgtctttatgggcagtgtgaaaacggactaatacagtaacacacctcatagggctgaacaaaatgaggaagatgagtg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2173454 350 - 3566421 gtttt----------------------------------------------------------------------------attcccatgtattttgggagggtcagggtgggaagtaactgaatcatggaggcaggtctttcccatcctgttcttgtgatattgaataagtctcccaagatctgatgcttttataaaggagagtttccctgcacaagctctcttctcttgtctgctgccacgtgagacatgcc-tttcaccatccaccgtgattgtgaggcctc-cccagccatgtggaa-tgtaagtctgttaaacctctttcttctgtcaactcctcagtcttgggcatgtctttatgggcagcgtgaaaacggactaatacaGTAACACGCCTCATAGGGCTGAACAAAATGAGGAAgatgagga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7372808 423 + 9267652 gttttattactcacagatccagagagaagagggtagttgatatg---gtttggctgtgtccccagccaaatctcatcttgaattcccacatattttggaagggacatggtgggaagtaactgaatcatgggggcaggtctttcccatcctgttcttgtgatattgaataagtctcccaagatctgatgcttttataaaggggagtttccctgcacaatgtctcttctcttgtctgttgccacgtgagacgtgcc-tttcaccttcccccatgattgcgcggtctc-cccagccatgtggaa-tgtaagtctgttaaacctctttcttctgtaaattcctcagtcttgggcatgtctttatgggcagcgtgaaaacggactaatacagtaacacacctcatagggctgaacaaaatgaggaagatgagtg i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 246171 3 - 1446996 I e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1582495 1507 - 14340318 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=1179673.000000 s hg38.chr14_KI270725v1_random 108932 374 + 172810 gggagcaagagagagaaaaggggtctgtgggactccagcctttatt-gggcccagaacattacccaaatatgttttcctcgagg--ctctagtcagtggggtgagtgccagca-ggcatatttctt-ggctcctgctgcaactgagca--ggtcactctggcgtttgggagctgtccatgtgtgctgtgaggtctgtggagtgagtcaggtaggttgtatccaacggttccatagctggtagtcaccaggaggaggcaactgtgtagggtcaatacctgggcc-agccacactgaggaactgtgagg---gttagaactgca-aattgtcaagggaatctgaacccagctaccataagag-agagttcaacttatgttcaatgtgaa s panTro5.chr1 126670347 375 + 228573443 gggaacaggagagagaaaaggggtctgtgggactccagcctttatt-gggcccagaacattacccaaataagtttttgatgggg--cactagtcagtgggatgagtgccagcaaggcacatttctt-gactcctgctgcaactgagca--ggtcactttggcgtgtgggggccgtccatgtgcgctgtgaggtctgtggggtgagtcaggtagtttgtatccaatggttccatagctggtagtcaccaggaggaggcaactgtgtagggtcaatatctgggcc-agccacactgaggaactgtgagg---gttagaactgga-aattgtcaagggaatctgaacccagctaccatatgag-agagttcaacttatgttcaatgtgaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 74668341 360 + 162613886 gtgagcaagagagagaaaaggggtctgtgggactccagcctttatt-gggcccagaacattacccaaat--gttttccatgggg--ctctagtcagtggggtgagtgccagca-ggcaaatttctt-ggctcctgctgcaactgagca--tgtcactctggcgtttgggagctgtccatgtgtgctgtgaggtctgtggggtgagtcaggtaggttgtatccaacggttccatagcgggtagtcaccaggaggaggcaactgtgtagggtcaatatctgggcc-agccacactgaggaactgtgagg----------------aattgtcaagggaatctgaacccagctaccatatgag-agagttcaacttatgttcaatgtgaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 89174 354 + 126596 g-gagcaggagagaaaa----gggttgtgga--tccag-ctttatt-ggg-ccagaacattacc--aataag-tttccacggg----cctagt--gtggggtgagtgccagca--gcacatttctt-gactcccgctgcaaccgagca--ggtcactctggcgtgtggg-gctgtccatgtgcgctgtgaggtctgtggggtgagtcaggtaggttgtatccaacggttccatagctggtagtcaccaggaggaggcaactgtgtagggtcaatatctgggcc-a-ccacactga-gaactgtgagg---gttagaactgga-aattgtcaagggaatccgaacccagctaccatatgag-agagttcaacttatgttcaatgtgaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5680443 374 + 72422247 gggagccagagagagaaaaggggtctgtgggactccagccattact-gggcccagaacaatacccaaataagttttccacgggg--atctagtcggtggggtgagtgccagca-ggcacatttctt-ggctcccgctgcaattgagca--ggtcactctggcgtgtgggggctgtccatgtgggctgtgaggtctgtagggtgagtcaggtaggttgtatccaacggttccattgtgggtactcaccaggaggaggcaactgtgtagggtcagtatctgggcc-agccacactgaggaactgtgagg---gttagaactgga-aattgtcaagggaatctgaacccagctaccatatgag-agagttcaacttatgttcaatgtgaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44118474 375 - 99891981 gggagcaagagagagaaaagggatctgtgggactccagccttcatt-gggcccagaatattacccaaaaaagttttccatgggg--ctctagtcagtggggtgagtgccagca-ggcacatttctt-ggctcccgctgcaactgagca--ggtcactctggcatgtgggggctgtccatgtggggtgtgaggtctgtggggtaagttaggtaggttgtatacaacgattccatagcgggtagtcaccaggaggaggcaactgtgtagggtcaatatctgggccgagctgcactgaggaactgggagg---gttacaactgga-aattgccaggggaagctgaacccagctaccgcatgag-agagttcaacttacattcagtgtgaa i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20053568 372 + 128169293 gggagcaagagagacagaaggggtctgtgggactccagtctttact-ggactcggaacattagccatacaagtttctcacaggg--ctttagttggtgaggtgagtgccggca-ggcacattccctggggtcccgctgtaactgagca--ggtcagtctggcatgggtggactgtccgtgtgggttgtgaggtctgcagggtgagttaggtaggttataaccagtcattccatagcagctagtcaccaggaggaagcaactgttcagggtcggtatctgggcc-------actgaggaactgggaggagggttagaactgga-aactgtcaagggaaactgaactcaactaccatataag-agagttcaacttacattcaatgtgaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17638862 370 + 18371965 gggagcaagagagacagaagaggtctgtgggactctagtctttact-ggactcggaacattagccaaacaagtttctcacaggg--ctctagttgg-gggttgagtgccagca-ggcacattccctggggtcctgctgtaactgagca--ggtcactctggcatgggtggactgtccatgcgggctgtgaggtccatagggtgagttaggtaggttatatccagtcattccgtagcagcgagtcaccgggagaaggcaactgtttagggtcaatatctgggcc-------actgaggaactgggaggagggttagaactgga-aactgtcaagggaaactgaacccaactaccatgtaag-agagttcgactta-attcaacgtcaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2173804 371 - 3566421 gggagcaagagagacagaaggggtctgtgggactccagtctttacg-ggactcggaacattagccaaacaagtttctcacgggg--ctctagttggtggggtgagtgccagta-ggcacattccctggggtcccactgtaactgagca--ggtcactctggcatgggtggactgtccatgtaggctgtgaggtctgtagggtgagttaggtaggtgatatccagtctttccatagcagctagtcaccaggagaaggcaactgtttagggtcaatatctgggcc-------actgaggaactgggaggaggattagaaccgga-tgctgtccaaggacacggaacccagctaccacataag-agagttcaactta-attcaacgtgaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7373231 371 + 9267652 gggagcaagagagacagaaggggtctgtgggactccagtctttact-ggactcggaacattagccaaacaagtttctcacgggg--ctctagttgatggggtgagtgccagca-ggcacattccctggggtcccactgtaactgagca--ggtcactctggcatgagtggactgtccatgtgggctgtgaggtctgtcgggtgagttagatagattatatccagtcattccataggagctagtcaccaggaggtggcaactgtttggggtcaatatctgggcc-------actgaggaactgggaggagggttagaactgga-ctctgtcaagggaaactgaacccaactaccatataag-agagttcaactta-attcaacgtgta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1584002 358 - 14340318 ggggggatgagagagagagagaatcagtgggactaaagctgtgaccagggcccaagacattctgtaagcagattttccatggggacttgtaacaggtgggcttggtgtaggca-ggcgtgagctccagagtcattctgtgactgagaggtggtctctgtgactcatgtgcccagcccttgtggg--------------gggaaagtccagtaggtcatatccagctaggccacag-ggagggtcaccaggaggcagctaccatg-ggagtggacatcaggtcc--cacacactgagaaatgggggag----------ctggaCCATAGGGAGGGTCACCAGGAGGTGGCCACTATGGGAGTGGACATCAGCTCCCACACACTGAGGA i otoGar3.GL873564 I 1507 I 127 e dasNov3.JH578441 246171 3 - 1446996 I e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=86329.000000 s hg38.chr14_KI270725v1_random 109306 36 + 172810 tgccatggcaatattaaaaggtaagaattcg---------------------------------------------------ctcca s panTro5.chr1 126670722 36 + 228573443 tgccatggcaatattaaaaggtaagaattcg---------------------------------------------------cACCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74668701 36 + 162613886 tgccatggcaatattaaaaggtaagaattcg---------------------------------------------------ctcca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 89528 36 + 126596 tgccatggcaatattaaaaggtaagaattcg---------------------------------------------------ctcca i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5680817 36 + 72422247 tgccacggcaatattaaaaggtaagaatttg---------------------------------------------------ctCTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44118849 36 - 99891981 tgccatgacaacattaaaatataagaattca---------------------------------------------------ctcca i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20053940 79 + 128169293 tgccacggtaacataaaaatgtaagaattTGGCCCGCACTCCGGCTC--------AAAAAAAGAAAAAAAGTTAAGAATTCACTCCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17639232 82 + 18371965 tgctacggcaacataaaaatgtaagaattcGACCTGCACTCCAGCTC-----AAAAAAAAAAAAAAAAAAAGTAAGGATTCACTCCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2174175 87 - 3566421 tggtacagcaacataaaaatgtaagaattcGGCCTGCACTCTGGCTCaaaaaaaaagaaaaaaaaaaaaaaGCAAGAATTCACTCCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7373602 79 + 9267652 tgctacggcaacagaaaaatgtaagaattcGGCCCGCACTCCGACTC--------AAAAAAAAAAAAAAAAGTAAGAATTCACTCCA i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 246171 3 - 1446996 I e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1584360 127 - 14340318 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=119327.000000 s hg38.chr14_KI270725v1_random 109342 30 + 172810 TACGTGCTTGAGGTAAATAGGAGAAACCTA s panTro5.chr1 126670758 30 + 228573443 TACGTGCTTGAGGTAAATGGGAGAAACCTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74668737 30 + 162613886 TACGTGCTTGAGGTAAATAGGAGAAACCTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 89564 30 + 126596 TACGTGCTTGAGGTAAATAGGAGAAACCTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5680853 30 + 72422247 TACGTGCTTGAGGTAAATAGGAGAAACCTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44118885 30 - 99891981 TACGTGCTCGCGGTAAATAGGAGAAACCTA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20054019 30 + 128169293 TATGTGCTCAAGGTAAATAGGAGAAACCTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17639314 30 + 18371965 TATATGCTCAAGGTAAATAGGAGAAACCTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2174262 28 - 3566421 TATGTGCTCAAGGTAAATAGGAGAAA--TA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7373681 30 + 9267652 TATGTGCTCAAGGTAAATAGGAGAAACCTA i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 246174 30 - 1446996 TATGTCTTTCAGGCAAATATGAGGGCTCTA i dasNov3.JH578441 I 3 C 0 e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e otoGar3.GL873564 1584360 127 - 14340318 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=448057.000000 s hg38.chr14_KI270725v1_random 109372 119 + 172810 GAATTTATGTAAACAGTGAGAAGATTGGATGTGTTTTCCGTCACATATTTTAATACTAGCAGCATATTATATATGTCAATCCATCAG---------------GCATTCAGAAATACATGCTTATGAAAATTTTT s panTro5.chr1 126670788 119 + 228573443 GAATTTATGTAAACAGTGAGAAGATTGGATGCGATTTCCATCTCATATTTTAATACTAGCAGCATATTATATATGTCAATCCATCAG---------------GCATTCAGAAATACATGCTTATGAAAATTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74668767 119 + 162613886 GAATTTATGTAAACAGTGAGAAGGTTGGATGTGTTTTCCATCACATATTTTAATACTAGCAGCATATTATATATGTCAATCCATCAG---------------GCATTCAGAAATACATGCTTATGAAAATTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 89594 118 + 126596 G-ATTTATGTAAACAGTGAGAAGATTGGATGCGTTTTCCATCACATATTTTAATACTAGCAGCATATTATATATGTCAATCCATCAG---------------GCATTCAGAAATACATGCTTATGAAAATTTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5680883 119 + 72422247 GAATTTATGTAAACAGTGAGAAGATAGGATGCGTTTTCTGTCACATATTTTAATACTAGCAGCATATTATGTATGTCAATCCATCAG---------------GCATTCAGAATTACATGCTTATGAAAATTTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44118915 119 - 99891981 GAACTTATGTAAACAGTGAGAAGATTGGATGCATTTTCCGTCACCTATTTTAATACTAGCAGCATATTATATATGTCAATCCATCAG---------------GCATTCAGAAATACATGCTTATGAAAATTTTT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20054049 116 + 128169293 GAATTTATGTAAATAGTGGGAAGATTTGATGCGTATTCAGTCACATGTTTTAATACTAGCAGCATGTTATATATGTCAATCTATCAG---------------ACCTTCAGAAATACATGCTTATGAAA---TTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17639344 117 + 18371965 AAATTTATGTAAACAGTGGGAAGATTTGATGCATATTCAGTCACATATTTTAATACTATCAGCATGTTATATATGTCAATCCATCAG---------------GCCTTCAGAAATACATGCTTATGAAA--TTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2174290 117 - 3566421 GAATTTATGTAAACAGTGGGAAGATTTGATGCATATTCAGCCACATATTTTAACACTAGCAGTATGTTATATATGACAATCTATCAG---------------GCCTTCAGAAATACATGCTTATAAAA--TTTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7373711 117 + 9267652 GAATGTATGTCAACAGTGGGAAGATTTGCGGCATATTCAGTCACATATTTTAATACTAGCAGCATGTTATATATGTCAATCCATCAG---------------GCCTTCAGAAATACATGCTTATGAAA--TTTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1584487 95 - 14340318 AAATGTGAATGAACAGCGAAGAGATCTGATACATATTCAATCACACATTTCAGGAACAGCAGTGT---------------------------------------CTTCATAAAAACATGCCAATGAAAATTTCT i otoGar3.GL873564 I 127 I 1 s dasNov3.JH578441 246204 133 - 1446996 GAATTTAAGTCAAGACTGAGACAACCCGATGGGTATCCAAACACGT-TTTCCTTAAGAGTAGCTCAATAGATATCATAACTAATAAACATTTGttaaaaaatatatatatatatatataCTTGTGAAAATTTCT i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 88970 2236 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=-55.000000 s hg38.chr14_KI270725v1_random 109491 1 + 172810 -T s panTro5.chr1 126670907 1 + 228573443 -T i panTro5.chr1 C 0 I 1 s panPan2.chr7 74668886 1 + 162613886 -T i panPan2.chr7 C 0 I 1 s gorGor5.CYUI01000522v1 89712 1 + 126596 -T i gorGor5.CYUI01000522v1 C 0 I 1 s ponAbe2.chrUn 5681002 1 + 72422247 -T i ponAbe2.chrUn C 0 I 1 s nomLeu3.chr17 44119034 1 - 99891981 -T i nomLeu3.chr17 C 0 I 1 s calJac3.chr8 20054165 1 + 128169293 -T i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17639461 1 + 18371965 -T i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2174407 1 - 3566421 -T i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 7373828 1 + 9267652 -T i aotNan1.NW_018514471v1 C 0 I 1 s tarSyr2.KE946558v1 91206 1 + 1121937 -T i tarSyr2.KE946558v1 I 2236 I 1125 s dasNov3.JH578441 246337 1 - 1446996 G- i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4078633 2140 + 55844845 I e otoGar3.GL873564 1584582 1 - 14340318 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=1124837.000000 s hg38.chr14_KI270725v1_random 109492 290 + 172810 ---CATCATCAGACAAAAGACAAGGGTAGAAGA------CA-TTTGTAACCCTATAAACTCTAGTAAATTAAAAACAGAAGGACCTTTATGTCCTAACATATCTGTGTTGTGAAAGGCTGCCCTGTGAAATACGGGATTTC-------------------------TTAAACATATTTTAAAAATCATAGGTGTCAA---TATTTTTTAGAAATCCATTTAAATTTTCTCTTGCTGTTTT-ACAATGCCTATT---------TATTTATTTAGTGGCTC----TGCTGATTTTGATGTATATCCTAAACTTTACATTTTCTTTAAAAGATGTTTTATACAAC s panTro5.chr1 126670909 290 + 228573443 ---CACCATCAGACAAAAGACAAGGGTAGAAGA------CA-TTTGTAACCCTATAAACACTGGTAAATTAAAAACAAAAGGACCTTTATGTCCTAACATATCTGTGTTGTGAAAGGCTGCCCTGTGAAATACGGGATTTC-------------------------TGAAACATATTTTAAAAATCATAGGTGTCAA---TATTTTTTAGAAATTCATTTAAATTTTCTCTTGCTATTTT-ACAATGCCTATT---------TATTTATTTAGTGGCTC----TGCTGATTTTGATGTATATCCTAAACTTTACATTTTCTTTAAAGGATGTTTTATACAAC i panTro5.chr1 I 1 C 0 s panPan2.chr7 74668888 290 + 162613886 ---CACCATCAGACAAAAGACAAAGGTAGAAGA------CA-TTTGTAACCCTATAAACACTAGTAAATTAAAAACAGAAGGACCTTTATGTCCTAACATATCTGTGTTGTAAAAGGCTGCCCTGTGAAATACAGGATTTC-------------------------TTAAACATATTTTAAAAATCATAGGTGTCAA---TATTTTTTAGAAATCCATTTAAATTTTCTCTTGTTATTTT-ACAATGCCTATT---------TATTTATTTAGTGGCTC----TGCTGATTTTGATGTATATCCTAAACTTTAAATTTTCTTTAAAAGATGTTTTATACAAC i panPan2.chr7 I 1 C 0 s gorGor5.CYUI01000522v1 89714 290 + 126596 ---CACCATCAGACAAAAGACAAGGGTAGAAGA------CA-TTTGTAACCCTATAAACACTAGTAAATTAAAAACAGAAGGACCTTTATGTCCTAACATATCTGTGTTGTGAAAGGCTGCCCTGTGAAATACGGGATTTC-------------------------TTAAACATATTTTAAAAATCATAGGTGTCAA---TATTTTTTAGAAATCCATTTAAATTTTCTCTTGCTATTTT-ACAATGCCTATT---------TATTTATTTAGTGGCTC----TGCTGATTTTGATGTATATCCTAAACTTTACATTTTCTTTAAAGGATGTTTTATACAAC i gorGor5.CYUI01000522v1 I 1 C 0 s ponAbe2.chrUn 5681004 290 + 72422247 ---CACCATCAGACAAAAGACAAGGGTAGAAGA------CA-TTTTTAACCCTATAAACACTAGTAAATTAAAAACACAAGGGCCTTTATGTCCTAATATATCTATGTTGTGAAAGGCTGCCCTGTGAAATACGGGATTTC-------------------------TTAAACATATTTTAAAAATCATAGGTGTCaa---tattttttagaaatccatttaaattttctcttgctatttt-acaatgcctatt---------tatttatttagtggttc----tgctgattttgatgtatatcctaaactttacattttctttaaagtatgttttatacaac i ponAbe2.chrUn I 1 C 0 s nomLeu3.chr17 44119036 290 - 99891981 ---CACCATCAGACAAGAGACAAGGATAGAAGA------CA-TTTTTAACCCTATACACACTAATAAATTAAAAACAGAAGGACCTTTATGTCCTATAATATCTATGTTGTGAAAGGCTGCTCTGTGAAATATGGGATTTC-------------------------TTAAACATATTTTAAAAATCATAGGTGTCaa---tattttttagaaatccatttaaatttcctcttgctatttt-acagtgcctatt---------tatttatttagtggttc----tgctgatttcgacgtatatcctaaaatttacattttctttaaagtatgttttatacaac i nomLeu3.chr17 I 1 C 0 s calJac3.chr8 20054167 285 + 128169293 ---CACCACAAGAAAAGAGACA-----AGAAGA------CA-TTTTTAACCATAGAAACACTAGTAAATTAAAAACAGAAGGACATTAATGTCCTAATGTATTTATGTTGTGGGAGGCTGCCCTATGAAATACAGGATTTT-------------------------TTAAACATATATTAAAAATCATAGGTGTCGA---TATtttttagaaatccatttaaattttctattgctatttt-acaatgcctatt---------tatttatttagtggttc----tgctgattttgacatatatcctaaacttcacattttctttaaagtaagttttatacaac i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17639463 315 + 18371965 ---CACCACAAGAAAAGAGACAAGGATAGAAGA------CA-TTTTTAACCATATAAACACTAGTAAATTAAAAACAGAAGGAGATTAATGTCCTGATGTCTTTATGTTGTGGGAGGCTGCCGTGTGAAATATGGGatttttatattaaaaatataaaaatatatgttaaaaatatattaaaaatCATAGGTGTCaa---tattttttagaaatctattcaaatcttctattgctatttt-acaatgcctatt---------catttatttagtggttc----tgctgattttgacatatatcctaaacttcacattttctttaaagtaagttttatgcatc i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2174409 291 - 3566421 ---CACCACAAGAAAAGAGACAAGGATAGAAGA------CATTTTTTAACCATATAAACACTAGTAAATTAAAAACAGAAGGACATTAATGTCCTAATGTATTTATGTTGTGGGAGGCCGCCCTGTGAAATACGGGACTTT-------------------------TTAAACATATGTTAAAAATCATAGATGTCGA---TATtttttagaaatccatttaaatcttctattgctatttt-acaatgcctatt---------catttatttagtggttc----tgctgattttgacatatatcctaaacttcacattttctttaaagtaggttttatgcctc i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 7373830 290 + 9267652 ---CACCACAAGAAAAGAGACAAGGATAGAAGA------CA-TTTTTAACCATATAAACACTGGTAAATTAAAAACAGAAAGACATTAATGTCCTAATGTATTTATGTTGTGGGAGGCTGCCCTGTGAAATACGGGATTTT-------------------------TTAAACATATATTAAAAATCATAGGTGTCGA---TATtttttagaaatccatttaaatcttctattgctatttt-acaatgcctatt---------catttatttagtggttc----tgctgattttgacatatatcctaaacttcacattttctttaaagtcagttttatacaac i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 1584583 225 - 14340318 ---GAACATAAGCAAAGAGACAAGAATAGAAGA------CACTTTTTAACTATATAAACA--ACTTAGTTGAAAAGAAAAAGAACCT-------------------------------------------------------------------------------TTAAAGACATTTTA----------TTCCCAA--CTCTGTTTAAGAAATCCATTTAAATTTGATATGGTCATTTT-ACAGTGCCTATT---------TATTTA-GCAGTTTTTC----TACAGATTATAATCAATATCCTTAATTATTAAGTTTCTGTAAAATGAATTTTATACAAC i otoGar3.GL873564 I 1 I 398 s dasNov3.JH578441 246338 267 - 1446996 GGCCATAGAATGAAAGGAGTTAAGGGTGAAAGAATACATAA-TATTTTATCATATAAACCCAAGTTAATTTAACACAAAATGATTTTT-----------------TGTTA--------------------------------------------------------TGAGATATATTTAAGAAATCATGATTGGTAGGACTATTTTTTAGATAACCTTTTTAAAATtttagtgccattttaactatacctcttttatctatatatttgtttagtagtttctcatatggattacaatattcatcctt-tcttttcagtttaattaaagtacattttctaccac i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 91207 1125 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=16116.000000 s hg38.chr14_KI270725v1_random 109782 5 + 172810 TTTAC s panTro5.chr1 126671199 5 + 228573443 TTTAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669178 5 + 162613886 TTTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90004 5 + 126596 TTTAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681294 5 + 72422247 tttat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119326 5 - 99891981 tttat i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20054452 5 + 128169293 ttcat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17639778 5 + 18371965 atcac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2174700 5 - 3566421 ttcat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374120 5 + 9267652 tccat i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 246605 5 - 1446996 tttat i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 91207 1125 + 1121937 I e otoGar3.GL873564 1584808 398 - 14340318 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=279846.000000 s hg38.chr14_KI270725v1_random 109787 70 + 172810 GTAAAATGTTTCAGTATCTTCACATTCTCTCCCTGTCCTT---TTGTTT---TGCTCTTATATGGTGGTCTTGAGT s panTro5.chr1 126671204 70 + 228573443 GTAAAATGTTTCAGTATCTTCACATTCTCTCCCTGTCCTT---TTGTTT---TGCTCTTATATGGTGGTCTTGAGT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669183 70 + 162613886 GTAAAATGTTTTAGTATCTTCACATTCTCTCCCTGTCCTT---TTGTTT---TGCTCTTATATGGTGTTCTTGAGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90009 69 + 126596 GTAAAATGTTTCAGTATCTTCACATTCTCTCCCTGTCCTT---TTGTTT---TGCTCTTATATGGTG-TCTTGAGT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681299 70 + 72422247 gtaaaatgtTACAGTATCTTCACATTCTCTCCCTGTCCTT---TTGTTT---TGCTCTTATATGGTGGCCTTGAGT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119331 70 - 99891981 gtaaaatgtTTCAGTGTCTTCACATTCTCTCCCCGTTCTT---TTCTTT---TGCTCTTATGTAGTGGCCTTGAGT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20054457 70 + 128169293 gtaaaatgtTTAAATATCTTCACATTCTCTCCCTGTCCTT---TTGTTT---TGCTCTCATAGGGTAGCCTTGAGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17639783 70 + 18371965 ataaaatgtTTAAGTATCTTCACATTCTCTCCCTGTCCTT---TTATTT---TGTTCTCACAGGGTAGCCTTGAGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2174705 70 - 3566421 gtaaaatgttgaagtaccttCACATTCTCTCCCTGTGCTT---TTGTTT---TGTTCTCATAGGGTAGTCTTGAGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374125 70 + 9267652 gtaaaatgtTTCAGTATCTTCACATTCTCTCCCTGTCCTC---TTATTT---TGTTCTCATAGGGTAGCCTTGAGT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1585206 71 - 14340318 gtgaaat-tcccataacaTCCACA-TCTCTCCCTGTCTGTTGATTCTTT---TGCTGTTGTATTGTGGCCTTGAGT i otoGar3.GL873564 I 398 C 0 s dasNov3.JH578441 246610 68 - 1446996 gtaaaatgCATT-GTCTCTTTACAGCCTTTCCCTGTCCTT---GCATTTGTCTGCTGTCATATCACTGCTCT---- i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4078633 2140 + 55844845 I e tarSyr2.KE946558v1 91207 1125 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=1275200.000000 s hg38.chr14_KI270725v1_random 109857 329 + 172810 CTTTTCTCTGGCTTTTCAAACCTAGTAAGACTAAGACACTAAAGTAAC--TTTGCCCGTGGTTTGGTAATA-TTTTCTAAAG---CACATCCTAAGCTCTCATGCATACAGGGG---------TCTCCTTTGAG-CTCTGTGCTTTTG--AGATCCCATATACCTAAATTCCAGTATTGC-AAATCAGTACTGCTCAGTTTCAGTTACTAA-GTTTAAAAA------TGTATTTTAATAGCAAGT------TAGTTTAGTGCACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTGACTGCTTGTATAC-------------------------------------ATGTATATTCCTTTAAATGAATCTTGGAATTTATTTAAAAATT--TTAAATTATACTAATGAAACTGTAT----- s panTro5.chr1 126671274 330 + 228573443 CTTTTCTCTGGCTTTTCAAACCTAGTAAGACTAAGACACTAAAGTAAC--TTTGCTCGTGGTTTGGTAATGCCCTTCCAAAG---CACATCCTAAGCTCTCGTGCATACAGGGG---------TCTCCTTTGAG-CTCTGTGCTTTTG--AGATCCCATATACCTAAATTCCAGTAGTCC-AAATCAGTACTGCTCAGTTTTAGTGACTAA-GTTTAAAAA------TGTATTTTAATAGCCAGT------TAGTTTAGTGCACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTGACTGCTTGTATAC-------------------------------------ATGTATATTCCTTTAAATGAATCTTGGAATTTATTTAAAAATT--TTAAATTATACTTATGAAATTGTAT----- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669253 328 + 162613886 CTTTTCTCTGGCTTTTC-AACCTAGTAAGACTAAGACACTAAAGTAAC--TTTGCCTGTGGTTTGGTAATG-CCTTCCAAAG---CACATCCTAAGCTCTCGTGCATACAGGGG---------TCTCCTTTGAG-CTCTGTGCTTTTG--AGATCCCATATACCTAAATTCCCGTACTCC-AAATCAGTACTGCTCAGTTTTAGTGACTAA-GTTTAAAAA------TGTATTTTAATAGCAAGT------TAGTTTAGTGCTCTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTGACTGCTTGTATAC-------------------------------------ATGTATATTCCTTTAAATGAATCTTGGAATTTATTTAGAAATA--TTAAATTATACTAATGAAACTGTAT----- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90078 328 + 126596 CTTTTCTCTGGCTTTTCAAACCTAGTAAGACTAAGACACTAAAG-AAC--TTTGCCCGTGGTTTGGTAATG-CCTTCCAAAG---CACATCCTAAGCTCTCGTGCATACAGGGG---------TCTCCTTTGAG-CTCTGTGCTTTTG--AGATCCCATATACCTAAATTCCAGTACTCC-AAATCAGTACTGCTCAGTTTTAGTGACTAA-GTTTAAAAA------TGTATTTTAATAGCAAGT------TAGTTTAGTGCACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTGACTGCTTGTATAC-------------------------------------ATGTATATTCCTTTAAATGAATCTTGGAATTTATTTAAAAATT--TTAAATTATACTAATGAAACTGTAT----- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681369 329 + 72422247 CTTTTCTCTGGCTTTTCAAACCTAGTAAGACTAAGACACTAAAGTAAC--TTTGCCCGTGGTTTGGTAATG-CCTTCTAAAG---CACATCCTAAGCTCTCATGCATACAGGGG---------TCTCCTTTGAG-CTCTATGCTTTTG--AGATCCCATATACCTAAATTCCAGTACTCC-AAATCAGTACTGCTCAGTTTTAGTTACTAA-GTTTAAAAA------TGTATTTTAATAGCAAGT------TAGTTTAGTGCACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTTACCGCTGATATAC-------------------------------------ATGCATATTCCTTTAAATGAATCTTGGaatttatttaaaaatt--ttaaattataCTAATGAAACTGTAT----- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119401 293 - 99891981 CTTTTCTCTGGCTTTTCAAACCTAGTAAAACTAAGACACTAAAGTAAC--TTTTCCTGTGGTTTGGTAATG-CCTTCTAAAG---CACATCCTAAGCTCTCGTGCATGCAGGGG---------TCTCCTTTGAG-CTTTATTCTATTG--AGATCCCATATACCTAAATTCCAGTAATCC-AAATCAGTACTGCTCAGTGTTAGTTATTAA-GTTTAAAAA------TTTATTTGAATAGCAAGT------TAGTTTAGTGAACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTTACTGCTGGTATAC-------------------------------------ATGTATATTCCTTTAA--------------------------------------ACCAATGAAACTGTAT----- i nomLeu3.chr17 C 0 I 5 s calJac3.chr8 20054527 329 + 128169293 CTTTTCTCTGGCTTTTCAAACCTAGTAAGACTAAGACACTAAAGTAAC-TTTTGACAGTGGTTTGGCAATG-ACTTCTAAAG---CACATCCTAAGCTCTCATGCATAGAAGGG---------TCTATTTTAAGCCTTTATTCTATTG--GGATCCCATATACCTAAATTCCAGTACTCC-AAATCAGGACTGGAAAGCTTTAGTTACTAA-GTTTACAAA------TTTATTTTAACAGCAAGT------TAGTTTGGTGTACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TATTTACTGCTGGAATAC-------------------------------------ATGTTTATTCCTTTAAATGAATCTTGGGAGtt-ttaa-aaatt--ttaaattatactaatgaaattgtat----- i calJac3.chr8 C 0 I 5 s saiBol1.JH378145 17639853 336 + 18371965 TTTTTCTCTGGCTTTTCAAACCTAGTAAGACTAACACACTAAAGTAAT-TTTTGACAGTGGTTTGGCAGTG-ACTCCTAAAG---CACATCCTAAGCTCTCGTGCAAAGAAGGG---------TCTACTTTGTGCCTTTATTCTATTG--GGATCCCATATAACTAAATTCTAGTACTCC-AAATCAGGACTGGAAAGCTTTAGTTACTAA-GTTTACAAA------TTTGTTTTAATAGCAAGTTAGTACTAGTTTAGTGTACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTTACTGCTGGTATAC-------------------------------------GTGTTTATTGATTTAAATGAATCTTGGGAGTTATTTA-AAATG--TTAAATTATACTAATGAAATTGTAT----- i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 2174775 336 - 3566421 ACTTTCTCTGGTTTTTCAAACCTAGTAAGACTAAGATACTAAAGTAAC-TTTTGACAGTGGTTTGGCAATG-ACTTCTAAAG---CACATCCTAAGCTCTCGTGCATAGAAGGG---------TCTATTTGGGGCCTTTATTCTATTG--GGATCCCATCTACCTAAATTCTAGTGCTCC-AAATTGGGACTGGAAAGCTTTAGTTACTAA-GTTTACAAA------TTTATTTTAATAGCAAGTTAGTACTAGTTTAGTATACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTTATTGCTGGTATAC-------------------------------------ATGTTTATTCCTTTAAATGAATCTTGGGAGTTATTTA-AAATT--TTAAATTATTCGAATAAAATTGTAT----- i cebCap1.NW_016107540v1 C 0 I 5 s aotNan1.NW_018514471v1 7374195 330 + 9267652 CTTTTCTCTAGCTTTCCAAACCTAGTAAGACAAAGACACTAAAGTAAC-TTTTGACAGTGGTTTGGAAATG-ACTTCTAAAG---CACATCCCAAGCTCTCGTGCATAGAAGGG---------TCTGTTTTGAGCCTTTATTCTATTG--GGATCCCACATACTTAAATTCCAGCACTCC-AAATCAGTACTGGAAAGCTTTAGTTACTAA-ATTTACAAA------TTTATTTTAATAGCAAAT------TAGTTTAGTGTACTC--T--------------------------------------------------------------------------------------------TGCTTCTT----TCTTTACTGCTGGTATAC-------------------------------------AAGTTTATTCCTTCAAATGAATCTTGGGAGTTATTTA-AAATT--TTAAATTATActaatgaaattgtac----- i aotNan1.NW_018514471v1 C 0 I 5 s otoGar3.GL873564 1585277 341 - 14340318 CTTTCCTCTGACTCTTCAAACCCAGTAAGACTAAGATCGTAACCTAATTTTTTCCCCATAGTCTTACAATG-TCACCTAAGT---AGTACCCTAAACTCCCGTGCATAGATCGGTCTATTTGATCTACTTTTAGCCCTTATT---TTA--AGTCCAAATATACCCCAATTCTAATACTCCTAAGTCAGTACTATGTAGTTTTAATTCTCAA-CGTTTGATC------TTTTTTTCAATAGCAATT------TATTTCAGTGTTCTCTTT--------------------------------------------------------------------------------------------TGTTTCTT----TCTTTCCTCCTGATACAT-------------------------------------ATATTTGTTCTTTTAAATGAATC-TGGGTGCTATTGA-AAACTCATTAAATAATACTGAGAAAATTTTAT----- i otoGar3.GL873564 C 0 I 164 s canFam3.chr18 4080773 327 + 55844845 CTCTCCTCTGATTCCTCAAGCC-AGTAAGACCATAAGAAAGACCTAAC-TTTTGTCCCTTGTTTGGCAATG-TTATCTAAAAAGTTATGTCCTAAACTCACATGTACACAGAGG---------TCCATTTTTAGCTATTATTCGATTGCAGGATCCAATATACTTATCCTT----------AAATCAATGCTTCATAGCTTCAGTTACTAATGCCTAATAA------TTTATTTTAATAGTTATT------GAGTTTGATGTATCC--T--------------------------------------------------------------------------------------------TTAATTTC----TCTTTATTGCTAATATAC-------------------------------------ATATTTATTTTTTGAAATGAATCTTGGG-GTTATTTA-AAATTTGCTGAGCTATACTGATGAAATTGTCT----- i canFam3.chr18 I 2140 I 6 s dasNov3.JH578441 246678 449 - 1446996 CTTTTCTTCTGT------AAGCCAGTAAGCCTATGATAATAAGTCCAG-TTATGTCCACTGTCTGAAAATG--CTGCTAAAG---CATGTCCTAAATGCCCATGCGGAC--------------TCTAACTT----CTTTGTTCTACCG--TGTTCCATCATACCTAT---------CCCT-AAATCAGCACTGTTGA-CTTTAATTACTAA-AGCTATATAAGTTATTTTATTTTAATACTTGTT------GAGTCTAGTGCAGTC--TTTTAGGAAAAAAAAAAtttttttggcattactggggattgaacccaggaccttgtacataggaagcaggtgctcaaccacttgagctacatctgtttccTAAACTTTTAATTGCTAATACACACACATTACACACACAGGCATATATAGGTATCTACATATATATTTTCTTTTAAATGAACCTTGAAATTC-TTTA-AAACTTGCTAAACTATCCTAAAGAAAGTTTGCTTGAC i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 91207 1125 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=5005.000000 s hg38.chr14_KI270725v1_random 110186 1 + 172810 A s panTro5.chr1 126671604 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669581 1 + 162613886 A i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90406 1 + 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681698 1 + 72422247 A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119699 1 - 99891981 A i nomLeu3.chr17 I 5 C 0 s calJac3.chr8 20054861 1 + 128169293 a i calJac3.chr8 I 5 C 0 s saiBol1.JH378145 17640194 1 + 18371965 A i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 2175116 1 - 3566421 A i cebCap1.NW_016107540v1 I 5 C 0 s aotNan1.NW_018514471v1 7374530 1 + 9267652 a i aotNan1.NW_018514471v1 I 5 C 0 s dasNov3.JH578441 247127 1 - 1446996 A i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4081100 6 + 55844845 I e tarSyr2.KE946558v1 91207 1125 + 1121937 I e otoGar3.GL873564 1585618 164 - 14340318 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=317788.000000 s hg38.chr14_KI270725v1_random 110187 62 + 172810 TTGTTGTGAATTCAT-AAGTGAATTTGGAAAGAATTTGTCTTTATGATACTAAATCCTTTTTA s panTro5.chr1 126671605 62 + 228573443 TTGTTGTGAATTCAT-AAGTGAATTTGGAAAGAATTTGTCTTTATGATACTAAATCCTTTTCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669582 62 + 162613886 TTGTTGTGAATTCAT-AAGTGAATTTGGAAAGAATTTGTCTTTATGATACTAAATCCTTTTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90407 62 + 126596 TTGTTGTGAATTCAT-AAGTGAATTTGGAAAGAATTTGTCTTTATGATACTAAATCCTTTTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681699 62 + 72422247 TTGTTGTGAATTCAT-AGGTGAATTTGGAAAGAATTTGTCTTTATGATACTAAATCCTTTTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119700 62 - 99891981 TTGTTGTGAATTGAT-AGATGAATTTGGAAAGAATTTGGCTTTATGATAATAAATCCTTTTTA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20054862 62 + 128169293 ttgttgtgaattgat-aggtgaatttggaaagaatttgtccttatgataccaaatccttttta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640195 62 + 18371965 TTGTTGTGAATTGAT-AGATGAATTTGGAAAAAAATTGTCTTTATGATACCAAATCCTTTTTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175117 62 - 3566421 TTGTTGTGAATCGAT-CGATGAATTTAGAAAGAATTTGTCTTTATGATACCAAATCCTTTTTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374531 62 + 9267652 ttgttgtgaatcgat-agatgaatttggaaagaatttgtctttatgataccaaatccttttca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1585782 61 - 14340318 TTGTAATAAATTGAT-AGATAAATTTGGGAGGAAG-TGTCTCTATAATTCCAAATCATTTTTA i otoGar3.GL873564 I 164 C 0 s canFam3.chr18 4081106 63 + 55844845 TTGCAATAAATTGATAAGATGAATTTGGGAAGAATTTGTCCTTATGATACTAGATCttttttt i canFam3.chr18 I 6 I 9 s dasNov3.JH578441 247128 62 - 1446996 GCGCATTAAATGAAA-GGATGATTTTTAGATGAACTTACATTTATGATATTGAATTGGTTTTA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 91207 1125 + 1121937 I e colAng1.NW_012115910v1 5179724 0 - 6934359 C e manLeu1.NW_012105809v1 627911 0 + 1799296 C e chlSab2.chr21 121512404 0 - 127223203 C e cerAty1.NW_012000909v1 7572332 4 - 10077455 I e macNem1.NW_012011522v1 339073 0 - 3123512 C e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346102 0 + 185818997 C a score=122732.000000 s hg38.chr14_KI270725v1_random 110249 10 + 172810 TCCAAGAATC s panTro5.chr1 126671667 10 + 228573443 TCCAAGAATC i panTro5.chr1 C 0 I 2 s panPan2.chr7 74669644 10 + 162613886 TCCAAGAACC i panPan2.chr7 C 0 I 2 s gorGor5.CYUI01000522v1 90469 10 + 126596 TCCAAGAATC i gorGor5.CYUI01000522v1 C 0 I 2 s ponAbe2.chrUn 5681761 10 + 72422247 TCCAAGAATC i ponAbe2.chrUn C 0 I 2 s nomLeu3.chr17 44119762 10 - 99891981 TCCAAGAATC i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 52346102 10 + 185818997 TCCAAGAATC i rheMac8.chr3 C 0 I 4 s macNem1.NW_012011522v1 339073 10 - 3123512 TCCAAGAATC i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 7572336 10 - 10077455 TCCAAGAATC i cerAty1.NW_012000909v1 I 4 I 4 s chlSab2.chr21 121512404 10 - 127223203 TCCAAGAATC i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 627911 10 + 1799296 TCCAAGAATC i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 5179724 10 - 6934359 TCCAAGAATC i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 20054924 10 + 128169293 accaagaata i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 17640257 9 + 18371965 TCCAAGAAT- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2175179 10 - 3566421 TCCAAGAATC i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 7374593 10 + 9267652 tccaagaatc i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 1585843 10 - 14340318 TCCAAGGACC i otoGar3.GL873564 C 0 I 479 s canFam3.chr18 4081178 10 + 55844845 tttaatCATC i canFam3.chr18 I 9 C 0 s dasNov3.JH578441 247190 10 - 1446996 TCCAAGGACC i dasNov3.JH578441 C 0 I 2 e tarSyr2.KE946558v1 91207 1125 + 1121937 I e macFas5.chr3 124991812 0 - 192294377 C a score=12744.000000 s hg38.chr14_KI270725v1_random 110259 2 + 172810 AT s panTro5.chr1 126671679 2 + 228573443 AT i panTro5.chr1 I 2 C 0 s panPan2.chr7 74669656 2 + 162613886 AT i panPan2.chr7 I 2 C 0 s gorGor5.CYUI01000522v1 90481 2 + 126596 AT i gorGor5.CYUI01000522v1 I 2 C 0 s ponAbe2.chrUn 5681773 2 + 72422247 at i ponAbe2.chrUn I 2 C 0 s nomLeu3.chr17 44119774 2 - 99891981 AT i nomLeu3.chr17 I 2 C 0 s calJac3.chr8 20054936 2 + 128169293 at i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 17640267 2 + 18371965 AT i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2175191 2 - 3566421 AT i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 7374605 2 + 9267652 at i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 1586332 2 - 14340318 AT i otoGar3.GL873564 I 479 C 0 s canFam3.chr18 4081188 1 + 55844845 -T i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 247202 2 - 1446996 AT i dasNov3.JH578441 I 2 C 0 e tarSyr2.KE946558v1 91207 1125 + 1121937 I e colAng1.NW_012115910v1 5179734 4 - 6934359 I e manLeu1.NW_012105809v1 627921 4 + 1799296 I e chlSab2.chr21 121512414 4 - 127223203 I e cerAty1.NW_012000909v1 7572346 4 - 10077455 I e macNem1.NW_012011522v1 339083 4 - 3123512 I e macFas5.chr3 124991812 0 - 192294377 C e rheMac8.chr3 52346112 4 + 185818997 I a score=427403.000000 s hg38.chr14_KI270725v1_random 110261 34 + 172810 GTGTCTTTATATTTATTCCTGTCTATATTTATGT s panTro5.chr1 126671681 34 + 228573443 GTGTCCTTATATTTATTCCCGTCtatatttatat i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669658 34 + 162613886 GTGTCTTTATATTTATTCCAGTCTATATTTATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90483 34 + 126596 GTGTCCTTATATTTATTCCAGTCtatatttatat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681775 32 + 72422247 gtgcctttatatttattc--gtctatatttatat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119776 28 - 99891981 GTGCC------TTTATTCTAGTCtatatttatat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346116 34 + 185818997 gtgtctttatatttattccagtctatatttacat i rheMac8.chr3 I 4 C 0 s macFas5.chr3 124991812 34 - 192294377 gtgtctttatatttattccagtctatatttacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339087 34 - 3123512 gtgtctttatatttattccagtctatatttacat i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 7572350 34 - 10077455 gtgtctttatatttattccagtctatatttacat i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 121512418 34 - 127223203 gtgtctttatatttattccagtctatatttacat i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 627925 34 + 1799296 gtgtctttatatttattccagtctatatttacat i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 5179738 34 - 6934359 GTGTCTTTATATTTAGTCCAGTCtatatttacat i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 20054938 34 + 128169293 gtgcctttacatttattccaatctatctttaTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640269 34 + 18371965 GTGCCTTTGTATTTACTCCAatttatctttatat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175193 34 - 3566421 GTGCCTTTATATTTATTCCAATCTATCTTTATAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374607 34 + 9267652 gtgcctttatatttattccaatctatctttaTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1586334 33 - 14340318 GTGTCTTTATATTTA-TCAGGTCTACATTTATTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081189 34 + 55844845 GTGCCTTTCTATTGATTTAGGTCTATTCTGATAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 247204 34 - 1446996 GTGCATTTTTATTTACTCAGGTCTACATTTACAT i dasNov3.JH578441 C 0 I 549 e tarSyr2.KE946558v1 91207 1125 + 1121937 I a score=448436.000000 s hg38.chr14_KI270725v1_random 110295 42 + 172810 CACTGAGtaaatatatagaaatgtagatacatacagct------gtag s panTro5.chr1 126671715 42 + 228573443 cactgagtaaatatatagaaatatagatacatacagct------gtag i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669692 42 + 162613886 CACTGAGtaaagatatagaaatgtagatacatacagct------gtag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90517 42 + 126596 cactgagtaaatatatagaaatgtagatacatacagct------gtag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681807 42 + 72422247 cactgagtaaatatatagaaatgtagatacatacagct------gtag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119804 42 - 99891981 cactgagtaaatatatagaaatgtagatacatatagct------atag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346150 42 + 185818997 aactgagtaaacatatagaaatgtagatacatatagat------atag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991846 42 - 192294377 aactgagtaaacatatagaaatgtagatacatatagat------atag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339121 42 - 3123512 aactgagtaaacatacagaaatgtagatacatatagat------atag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7572384 38 - 10077455 aactgagtaaacatatagaaatgttgatacatatagat---------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512452 38 - 127223203 aactgagtaaacatatagaaatgtagatacatatagat---------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 627959 42 + 1799296 aactgagtaaacatatagaaatgtagatacatatagat------atag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179772 48 - 6934359 aactgagtaaacatatagaaatgtagatacatatagatatagttatag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20054972 42 + 128169293 AACTGAGTAAATATATAGAAATGTAGATACATATGGAT------ATAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640303 42 + 18371965 aactgagtaaatatatagaaatgtagatacatatgaat------atag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175227 42 - 3566421 AACTGAATGAatatatagaaatgtagatacatatgtat------atag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374641 42 + 9267652 AACTGAGTAAATatatagagatgtagatacatatggat------atag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1586367 41 - 14340318 AACTGAGTAAAT-TATATATATATACACACATACAGAT------ATAG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081223 26 + 55844845 GCCTGAGTAG----ATAGAAATATTGATA---------------A--- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 247238 549 - 1446996 I e tarSyr2.KE946558v1 91207 1125 + 1121937 I a score=399872.000000 s hg38.chr14_KI270725v1_random 110337 41 + 172810 tt----------------atagatacaaatatagatataacatgttaaatcta----tatc s panTro5.chr1 126671757 45 + 228573443 tt----------------atagatacaaatatagatataacatgatatatctatatctatc i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669734 45 + 162613886 tt----------------atagatacaaatatagatataacatgttaaatctatatctatc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90559 45 + 126596 tt----------------atagatacaaatatagatataacatgttaaatctatatctatc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681849 45 + 72422247 tt----------------atagatagaaatgtagatataacatattaaatctatatctatc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119846 49 - 99891981 ttata------------gatagatataaatatagatataacatgttaaatctatatctatc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346192 43 + 185818997 ------------------atagatacaaatatagatataacatgttaaatctgtgtctatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991888 43 - 192294377 ------------------atagatacaaatatagatataacatgttaaatctgtgtctatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339163 43 - 3123512 ------------------atagatacaaatatagatataacatgttaaatctgtgtctatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7572422 43 - 10077455 ------------------atagatacaaatatagatataacatgttaaatctgtatctatc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512490 43 - 127223203 ------------------atagatacaaatatagatataacatgttaaatctgtatctatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628001 43 + 1799296 ------------------atagatacaaatatagatataacatgttaaatctgtatctatc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179820 43 - 6934359 ------------------atagatacaaatatagatataacatgttaaatctgtatctatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055014 45 + 128169293 TTATA------------GAGATATACAAATATCGATATAACATGTTAAAACTA----TATC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640345 49 + 18371965 ttata------------gatagatacaaatatcgatataacatgttaaaactatatctatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175269 27 - 3566421 t----------------------------------tataacatgttaaaactaaatctatc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374683 49 + 9267652 ttata------------gatagatacaaatatcgatataacatgttaaaactatatctatc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1586408 56 - 14340318 ACATGAATATAGTTTTTAATAGGTACAAATATA-----AGCATACTAAAGGTATATGTGTC i otoGar3.GL873564 C 0 I 4 s canFam3.chr18 4081249 36 + 55844845 ------------------ACAGATAAAGATGAAGCTATAATAAGTTAAAA-------TATT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 247787 41 - 1446996 ----------------TTATTAGTGTACATCTAGGTA-AATATGGTTTAT---TGTATATC i dasNov3.JH578441 I 549 C 0 e tarSyr2.KE946558v1 91207 1125 + 1121937 I a score=40587.000000 s hg38.chr14_KI270725v1_random 110378 5 + 172810 ccgta s panTro5.chr1 126671802 5 + 228573443 ccata i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669779 5 + 162613886 ccata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90604 5 + 126596 ccata i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681894 5 + 72422247 ccata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119895 5 - 99891981 ccata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346235 5 + 185818997 ccatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991931 5 - 192294377 ccatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339206 5 - 3123512 ccatg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7572465 5 - 10077455 ccatg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512533 5 - 127223203 ccatg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628044 5 + 1799296 ccatg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179863 5 - 6934359 ccatg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055059 5 + 128169293 CCATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640394 5 + 18371965 ccata i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175296 5 - 3566421 ccata i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374732 5 + 9267652 ccata i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 92332 2 + 1121937 tc--- i tarSyr2.KE946558v1 I 1125 I 27522 s otoGar3.GL873564 1586468 5 - 14340318 TCAAA i otoGar3.GL873564 I 4 C 0 s canFam3.chr18 4081285 1 + 55844845 -C--- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 247828 5 - 1446996 CTAAA i dasNov3.JH578441 C 0 C 0 a score=1613375.000000 s hg38.chr14_KI270725v1_random 110383 159 + 172810 ---taacatatat-------acatgttatatgtgtgtgtgta----ta-------t--------ata-tatatgtttatGT-TATTAAAG------AGCTCCCTTAAAATTTTTATTT-TATTTCCTATATAATTTTAGGTCGAGCTTGAATTTTCCTT--------GT--------------ATAAACAAGCAAATATTTATACTAGTTTTAATACTG s panTro5.chr1 126671807 157 + 228573443 ---taacatatat-------acatgttatatgtgtgtgtg------ta-------t--------ata-tatatgtttatGT-TATTAAAG------AGCTCCCTTAAAATTTTTCTTT-TATTTCCCATATAATTTTAGGTCGAGCTTGAATTTTCCTT--------GT--------------ATAAACAAGCAAATATTTATACTAGTTTTAATACTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669784 159 + 162613886 ---taacatacgt-------acatgttatatgtgtgtgtgta----ta-------t--------ata-tatatgtttatGT-TATTAAAG------AGCTCCCTTAACATTTTTCTTT-TATTTCCCATATAATTTTAGGTCGAGCTTGAATTTTCCTG--------GT--------------ATAAACAAGCAAATATTTACACTAGTTTTAATACTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90609 157 + 126596 ---taacatatat-------acatgttatatgtgtgtgtg------ta-------t--------ata-tatatgtttatGT-TATTAAAG------AGCTCCCTTAAAATTTTTCTTT-TATTTCCCATATAATTTTAGGTCGAGCTTGAATTTTCCTT--------GT--------------ATAAACAAGCAAATATTTATACTAGTTTTAATACTG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5681899 155 + 72422247 ---taacatatat-------acattttatatgtgtgtg--------ta-------t--------ata-tatatgtTTGTGT-TATTAAAG------AGCTCCCTTAAAATTTTTCTTT-TATTTCCTATATAATTTTAGGTTGAGTTTGAATTTTCCTT--------GT--------------ATAAACAAGCAAATATTTATACTAGTTTTAATACTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44119900 166 - 99891981 ---taacatatat-------atatgttatatgtgtgtatata----tatatatatt--------ata-tatatGTTTGTGT-TAATAAAG------AGCTCCCCTAAAATTTTTCTTT-TATTTCCTATATAATTTTAGGTTGATCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTATACTAGTTTTAATATTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346240 161 + 185818997 ---taacatatat-------ac--gttatatatgtgtgtatg----tg-------tgtgt----ata-tatatgtttgtat-tatTAAAG------AGCTCCCTTAAAATTTTTCTTT-TGTTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTATACTAGTTTTAATACTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124991936 163 - 192294377 ---taacatatat-------acatgttatatatgtgtgtatg----tg-------tgtgt----ata-tatatgtttgtat-tatTAAAG------AGCTCCCTTAAAATTTTTCTTT-TGTTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTATACTAGTTTTAATACTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339211 163 - 3123512 ---taacatatat-------acatgttatatatgtgtgtatg----tg-------tgtgt----ata-tatatgtttgtat-tatTAAAG------AGCTCCCTTAAAATTTTTCTTT-TGTTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTATACTAGTTTTAATACTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7572470 167 - 10077455 ---taacatatat-------acatgttatatatgtgtatatg----tg-------tgtgtgttcata-tatatGTTTGTGT-TATTACAG------AGCTCCCTTAAAATTTTTCTTT-TGTTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTATACTAGTTTTAATACTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512538 165 - 127223203 ---taacatatat-------acatgttatatatgtgtatatg----tg-------tgtgtgt--ata-tatatGTTTGTGT-TATTAAAG------AGCTCCCTTAAAATTTTTCTTT-TGTTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTATACTAGTTTTAATACTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628049 164 + 1799296 ---taacatatat-------acatgttatatatgtgtatatg----tg-------tgtgtgt--ata-tatatgtttgtgt-TATTACAG------AACTCCCTTAAAATTTTTCTTT-TGTTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT---------------TAAACATGCAAATATTTATACTAGTTTTAATACTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5179868 161 - 6934359 ---taacatatat-------acatgttatatgtgtgtatatg----tg-------tgtgtgt--ata-tatatGTTTGTGT-TATTAAAG------AGCTCCCTTAACATTTTTC-----ATTTCCTATATATTTTTAGGTTGAGCTTGAATTTTCCTT--------GT--------------ATAAACATGCAAATATTTACACTAGTTTTAATACTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055064 158 + 128169293 ---TAAAatatat-------gcatgttacatgtgtgtatgtgtgtata-------t--------ata-tatgtgtgtgtgtGTATTAAAG------AGCTCCCTTAAAATTCTT-------TTTCTTATGTGTTTTTAGGTTGAGCTTGAATTTTCGTT--------GT--------------ATAAAAATGCAAATGTTTATACCAGTTTTAATACTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640399 152 + 18371965 ---taatatatat-------aca--ttatatgtgtgtatgtg----ta-------t--------ata-catatgtgtgtgtgtatTAAAG------AGCTTCCTTATAATACTT-------TTTCTTATGTGTTTTTAGGTTGAGCTTGAATTTTCATT--------GT--------------ATGAAAATGCAAATGTTTATACCAGTTTTAATACTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175301 153 - 3566421 ---taatatatat-------acatgttatatgtgtgtgtgta----ta-------t--------ata-catatGTGTGTGTGTATTAAAG------AGCTCCCTTAAAATTCTT-------TTTCTTATGTGTTTTTAGGTTGAGCTTGAATTTTCGAT--------GT--------------ATAAAAATGCAAATGTTTATACCAG-TTTAATACTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374737 142 + 9267652 ---t---atataC-------ACATGTtgtgtgtgtgtgtgtg----------------------------tgtgtgtgtgtgtATTAAAG------AGCTCCCTTAAAATTCTT-------TTTCTTATGTGTTTCTAGGTTGAGCTTGAATTTTTGTT--------GT--------------ATAAAAATGCAAATGTTTATACCAG-TTTTATACTG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1586473 164 - 14340318 ---TAATGCATGTGGGTAGCACATCTTATTCATCTATATGT-----TA-------T--------ATG-TGTGTCTATATGT-TATTAAAC------AGCTACCTTAA-ATTTTTCTTC-CATTTTCTATAGATTTTTTGGTTAAGCCTGAATTTTCCTA--------TT--------------ATACAAACTTGAATATTGATTCTAATTTTGATTCTG i otoGar3.GL873564 C 0 I 622 s canFam3.chr18 4081286 144 + 55844845 ---------------------------------------------------------------TCTT-TCTCTCTTTCTAT-CTTTAAGGGGAAATAACTACCTCA--ATTTTTGTTCGCATTTCCTATAAATATTTAGGTTAAGTTTGAATTTTCCTA--------TTTTAGAATTATAATGATATAAACCCAAATATTTATACCAGCTTTAATACCA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 247833 171 - 1446996 TGTTAAAATTTCT-------GTATGTTAAAATTATTGGCttt----ta-------t--------atattaaatatatatat-tattaaat------aaCCCCATTGACTTATTTCTTT-TACTTCCTATACTTTTTCAGATTAAACTTGAATTTTTATGCTACATAAGC--------------ATAAAAACTCaaatattcatattaattttactacta i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=114868.000000 s hg38.chr14_KI270725v1_random 110542 9 + 172810 ATGTTTAGA s panTro5.chr1 126671964 9 + 228573443 ATGTTTAGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669943 9 + 162613886 ATGTTTAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90766 9 + 126596 ATGTTTAGA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682054 9 + 72422247 AGGTTTAGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120066 9 - 99891981 ATGTTTAGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346401 9 + 185818997 ATGTTTAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992099 9 - 192294377 ATGTTTAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339374 9 - 3123512 ATGTTTAGA i macNem1.NW_012011522v1 C 0 I 63 s cerAty1.NW_012000909v1 7572637 9 - 10077455 ATGTTTAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512703 9 - 127223203 ATGTTTAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628213 9 + 1799296 ATGTTTAGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180029 9 - 6934359 ATGTTTAGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055222 9 + 128169293 ATGTTTAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640551 8 + 18371965 AT-TTTAGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175454 9 - 3566421 ATGTTTAGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374879 9 + 9267652 ATGTTTAGA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587259 9 - 14340318 ATTCTTGTA i otoGar3.GL873564 I 622 C 0 s canFam3.chr18 4081430 9 + 55844845 ATGATTGTA i canFam3.chr18 C 0 I 3 s dasNov3.JH578441 248004 9 - 1446996 atttttaaa i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=143105.000000 s hg38.chr14_KI270725v1_random 110551 16 + 172810 CATTGCA-TCTTATTTT s panTro5.chr1 126671973 16 + 228573443 CATTGTA-TCTTATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669952 16 + 162613886 CATTGTA-TCTTATTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90775 16 + 126596 CATTGTA-TCTTATTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682063 16 + 72422247 CATTCTA-TCTTATTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120075 16 - 99891981 AATTCTA-TCTTATTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346410 16 + 185818997 TGTTCTA-TTTTATTTT i rheMac8.chr3 C 0 I 47 s macFas5.chr3 124992108 16 - 192294377 TGTTCTA-TTTTATTTT i macFas5.chr3 C 0 I 23 s cerAty1.NW_012000909v1 7572646 16 - 10077455 TGTTCTA-TTTTATTTT i cerAty1.NW_012000909v1 C 0 I 47 s chlSab2.chr21 121512712 16 - 127223203 TGTTCTA-TTTTATTTT i chlSab2.chr21 C 0 I 47 s manLeu1.NW_012105809v1 628222 16 + 1799296 TGTTCTA-TTTTATTTT i manLeu1.NW_012105809v1 C 0 I 47 s colAng1.NW_012115910v1 5180038 16 - 6934359 TGTTCTT-TTTTATTTT i colAng1.NW_012115910v1 C 0 I 47 s calJac3.chr8 20055231 16 + 128169293 CCTTCTA-TTTTATTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640559 17 + 18371965 CCTTCTATTTTTATCTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175463 16 - 3566421 CCTTCTA-TTTTATTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374888 16 + 9267652 CCTTCTG-TTTTATTTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587268 16 - 14340318 CTTTCTA-CTTTATTTT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081442 15 + 55844845 CTGTATT-TTTTATTT- i canFam3.chr18 I 3 C 0 s dasNov3.JH578441 248013 12 - 1446996 ----taa-ttttatttt i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339383 63 - 3123512 I a score=43449.000000 s hg38.chr14_KI270725v1_random 110567 9 + 172810 AGCATTGAA s panTro5.chr1 126671989 9 + 228573443 AGCATTGAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669968 9 + 162613886 AGCATTGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90791 9 + 126596 AGCATTGAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682079 9 + 72422247 AGCATTGAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120091 9 - 99891981 AGCATTGAA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 124992147 9 - 192294377 AATATTAAT i macFas5.chr3 I 23 I 15 s calJac3.chr8 20055247 8 + 128169293 AGCATTGA- i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 17640576 8 + 18371965 AGCATTGA- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2175479 8 - 3566421 AGCATTGA- i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 7374904 8 + 9267652 AGCATTGA- i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 1587284 9 - 14340318 AGCATTGAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081457 9 + 55844845 ACCATTGaa i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248025 9 - 1446996 aCCATTGAA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e colAng1.NW_012115910v1 5180054 47 - 6934359 I e manLeu1.NW_012105809v1 628238 47 + 1799296 I e chlSab2.chr21 121512728 47 - 127223203 I e cerAty1.NW_012000909v1 7572662 47 - 10077455 I e macNem1.NW_012011522v1 339383 63 - 3123512 I e rheMac8.chr3 52346426 47 + 185818997 I a score=4875.000000 s hg38.chr14_KI270725v1_random 110576 3 + 172810 TAT s panTro5.chr1 126671998 3 + 228573443 TAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669977 3 + 162613886 TAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90800 3 + 126596 TAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682088 3 + 72422247 TAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120100 3 - 99891981 TAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346473 3 + 185818997 TAT i rheMac8.chr3 I 47 C 0 s macFas5.chr3 124992171 3 - 192294377 TAT i macFas5.chr3 I 15 C 0 s cerAty1.NW_012000909v1 7572709 3 - 10077455 TAT i cerAty1.NW_012000909v1 I 47 C 0 s chlSab2.chr21 121512775 3 - 127223203 TAT i chlSab2.chr21 I 47 C 0 s manLeu1.NW_012105809v1 628285 3 + 1799296 TAT i manLeu1.NW_012105809v1 I 47 C 0 s colAng1.NW_012115910v1 5180101 3 - 6934359 TAT i colAng1.NW_012115910v1 I 47 C 0 s calJac3.chr8 20055257 1 + 128169293 T-- i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 17640585 1 + 18371965 T-- i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2175489 1 - 3566421 T-- i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 7374914 1 + 9267652 T-- i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 1587293 3 - 14340318 TAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081466 3 + 55844845 tat i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248034 3 - 1446996 CAT i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339383 63 - 3123512 I a score=180554.000000 s hg38.chr14_KI270725v1_random 110579 37 + 172810 TTTCACA---AT--TATAAA------TATTATC---TAATATTAATAATGT s panTro5.chr1 126672001 40 + 228573443 TTTCACAATTAT--TATAAA------TGTTATC---TAATATTAATAATGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74669980 37 + 162613886 TTTCACA---AT--TATAAA------TATTATC---TAATATTAATAATGT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 90803 39 + 126596 TTTCACA---ATTATATAAA------TATTATC---TAATATTAATAATGT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682091 40 + 72422247 TTTCACaattat--tataaa------tattatc---taatattaataatGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120103 37 - 99891981 ATTCACAATTAT--TATAAA------TATTATC---TAA---TAATAATGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346476 37 + 185818997 TTTCACA---AT--TATTAT------AATTATC---TAATATTAATAATGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992174 37 - 192294377 TTTCACA---AT--TATTAT------AATTATC---TAATATTAATAATGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339446 36 - 3123512 TTTCACA---AT--TATAAA------TATTATC---TAAT-TTAATAATGT i macNem1.NW_012011522v1 I 63 I 240 s cerAty1.NW_012000909v1 7572712 34 - 10077455 TTTCACA---AT--TAT---------AAATATC---TAATATTAATAATGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512778 37 - 127223203 TTTCACA---AT--TATTAT------AAATATT---TAATATTAATAATAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628288 40 + 1799296 TTTCACA---AT--TATTAT------AAATATTATCTAATATTAATAATGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180104 37 - 6934359 TTTCACA---AT--TATTAT------AAATATC---TAACATTAATAATGT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055258 43 + 128169293 TTTCATA---AT--TATTATAAATGTTACGATC---TAATATTAATGATGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640586 43 + 18371965 TTTCATA---AT--TATTATAAATGTTACAATC---TAATATTAATAATGC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175490 41 - 3566421 TTTCATA---AT--TATTAT--GTGTTATGATC---CAATATTAATAATGC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374915 43 + 9267652 TTTCATA---GT--TATTATAAAAGTTATGATC---TAATATTAATAATGC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587296 43 - 14340318 TGTCACA---GT--TATCACACATATCATAATG---CAATATCGACAGTGT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081469 6 + 55844845 ttttat--------------------------------------------- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248037 1 - 1446996 --T------------------------------------------------ i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=136606.000000 s hg38.chr14_KI270725v1_random 110616 18 + 172810 ACCTGTTAAAAATATTTA s panTro5.chr1 126672041 18 + 228573443 ACCTGTTAAAAATATTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74670017 18 + 162613886 ACCTGTTAAAAATATTTA i panPan2.chr7 C 0 I 1310 s gorGor5.CYUI01000522v1 90842 18 + 126596 ACCTGTTAAAAATATTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682131 18 + 72422247 AACTGttaaaaatattta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120140 18 - 99891981 AACTGTTAAAAATATGTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346513 17 + 185818997 AACTG-TAAAAATATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992211 17 - 192294377 AACTG-TAAAAATATTTA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7572746 17 - 10077455 AACTG-TAAAAATATTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512815 17 - 127223203 AACTG-TAAAAATATTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628328 17 + 1799296 AACTG-TAAAAATATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180141 17 - 6934359 AACTG-TAAAAATATTAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055301 17 + 128169293 AACta-ttaaaatattta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640629 17 + 18371965 AACta-ttaaaatattta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175531 17 - 3566421 AACTA-TTAAAATAGTTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374958 17 + 9267652 AACTA-TTAAAATATTTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587339 18 - 14340318 AACTATACAAAATATGTA i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248038 0 - 1446996 C e canFam3.chr18 4081475 0 + 55844845 C e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339482 240 - 3123512 I a score=1326351.000000 s hg38.chr14_KI270725v1_random 110634 142 + 172810 AAATTTTACCT------------TTGAATTATTTTATTGTTGAATTAAAATTCCTTT-AATATGATAGTAAATTTCTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATCAGA- s panTro5.chr1 126672059 142 + 228573443 AAATTTTACCC------------TTGAATTATTTTATTGTTGAATTAAAATTCCTTT-AATATGATAGTAAATTTCTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATCAGG- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671345 143 + 162613886 AAATTTTACCT------------TTGAATTATTTTATTGTTGAATTTAAATTCCTTTAAATATGATAGTAAATTTCTATTTTATGCTTTCTCTATGAATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACTTATGAAAATCAAG- i panPan2.chr7 I 1310 C 0 s gorGor5.CYUI01000522v1 90860 140 + 126596 AAATTTTACCT------------TTGAATTATTTTATTGTTGAATTAAAATTCCTTT--ATATGATAGTCAATTTCTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAAC-TATGAAAATCAGG- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682149 136 + 72422247 aaattttaCCT------------TTGAATTATTTTATTGTTGAATTTAAATTCCTTTAAGTATGATAGTAAATTTCTATTTTATGCTTTCTCCATGC-------AA---TTA------ATCTATCCACTTC-----TCT--------------ATCCCTATGTAGTAACATATGAAAATTAGG- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120158 143 - 99891981 AAATTTTACCA------------TTGAATTATTTTATTGTCGAATTTAAATTCCTTTAAGTATGATAGTAAATTTGTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTACCTACTTC-----TCT--------------ATCTCTATGTAGTAACATATGGAAATCAGG- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346530 143 + 185818997 AAATTTTACCA------------TTGAATTATTTTATTGTTGAATTTAAATTCTTTTACATATGATAGTAAATTTGTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATGAGA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992228 143 - 192294377 AAATTTTACCA------------TTGAATTATTTTATTGTTGAATTTAAATTCTTTTACATATGATAGTAAATTTGTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATGAGA- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7572763 143 - 10077455 AAATTTTACCA------------TTGAATTATTTTATTGTTGAATTTAAATTCTTTTACATATGATAGTAAATTTGTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATGAGA- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512832 143 - 127223203 AAATTTTACCA------------TTGAATTATTTTATTGTTGAATTTAAATTCTTTTACATATGATAGTAAATTTATATTTTATGCTTTATCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATGAGA- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628345 143 + 1799296 AAATTTTACCA------------TTGAATTATTTTATTGTTGAATTTAAATTCTTTTACATATGATAGTAAATTTGTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATACGAAAATGAGA- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180158 141 - 6934359 AAATTTTACCA------------TTGAAT--TTTTTTTGTTGAATTTAAATTCTTTTAAGTATGATAGTAAATTTGTATTTTATGCTTTCTCTATGCATATGCAAA---TTA------ATCTATCCACTTC-----TCT--------------ATCTCTATGTAGTAACATATGAAAATGAGA- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055318 155 + 128169293 aaattttaCCATTA-TTTAATCGTTGAATTATTTAATTCTTGAATTTAAATTCCTTTA---AGTATAATAAATTTGAATTTTATACTGACTCTGTGCATATGAAAA---TTA------ATCTATTCACTTC-----TTGAAC----------AATCTCTATGTAGTAACATATGAATATGAGA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640646 155 + 18371965 aaattttaccatta-tttaattgttgaattattttattcttgaatttaaattccttta---agtataataaatttgtattttataCTTTCTCTATGCATATGCAAA---TTA------ATCTAGTCACTTC-----TCTAAC----------AATCTGTATGTAGTAACATATGAAAATGAGG- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175548 154 - 3566421 AAATTTTACCATTA-TTTAATCATTGAGTTATTTT-TTCTTGAATTTAAATTCCTTTA---AGTATAATAAATTTGTATTTTATACTTTCTCTATGCATATACAAA---TTA------ATCTATTCAATTC-----TCTAAT----------AATCTCTATGTAGTAACATATGAAAATGAGA- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7374975 157 + 9267652 AAATTTTACTATTA-TTTAATCATTGAATTATTTTATTCTTGAATTTAAATTCCTTTA-ATATGATAATAAATTTGTATCTTACACTTTCTCTATGCATATACAAA---TTA------ATCTATTCACTTC-----TCTAAC----------AATCTCTATGTAGTAACATATGAAAATGAGA- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587357 157 - 14340318 CAATTTTACCATTATTTTTGCCATTGAAACTTTTTATTCCTGAATTTAACTTTCTTTA-AGGTGGTAAAAAGTTT-CAGTTGATGTTTT-TTTATGCATGTAAAAA---TTA------ATCCTTCTGTTTCCTCTGTCT--------------AGATTTACGTAGTAGAAAGTAAGACTAAGA- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081475 118 + 55844845 ----------------------------------------ttattttaatttCCTTTATATATGATAATAAAC---TATGTGATGTTTTCTCTGTGCATATGCAAG---CTAATATCTATATATGCATTTC-----TCT--------------ATCTCTGGTTAGTAAAATATGAAAATAAGA- i canFam3.chr18 C 0 I 137 s dasNov3.JH578441 248038 132 - 1446996 -----------------------------------ATTACTGAATTTAATTTC---TATGTATGATAATG---TTTTAGTTGAAGTTTTCTCTCTCTATATACAAATGTTCT------AGCTATCTACTTT-----TATATCTTTCACCACTTGTCTCTAGTTAGTAAAACAGGAAAAGAAAGA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339482 240 - 3123512 I a score=994209.000000 s hg38.chr14_KI270725v1_random 110776 96 + 172810 C-----CTCTCTTCTTCTAATGGACATACAC---------------------ATGTTTGCCTATAGAATATCAGACTCTTTATAGCATTTAAAATCTTTAAAGACATGAATATTGCCT--TTTA s panTro5.chr1 126672201 96 + 228573443 C-----CTCTCTTCTTCTAATGGACATACAC---------------------ATGTTTGCATATAGAATATCAGACCCGTTATAGCATTTAAAATCTTTAAAGACATGAATATTGCCT--TTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671488 96 + 162613886 C-----CTCTCTTCTTCTAATAGACATATAC---------------------ATGTTTGCATATAGAATATCAGACTCTTTATAGCATTTAAAATCTTTAAAGACATGAATATTACCT--TTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91000 96 + 126596 C-----CTCTCTTCTTCTAATGGACATACAC---------------------ATGTTTGCATATAGAATATCAGACCCTTTATAGCATTTAAAATCTTTAAAGACATGAATATTGCCT--TTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682285 96 + 72422247 C-----CTCTCTTCTTCTAATGGACATACAC---------------------ATGTTTGCATATAGAATATCAGACTCTTTATAGCATTTAAAATCTTTAAAGACATGAATATTACCT--TTCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120301 96 - 99891981 C-----CTCTCTTCTCCTAATAGACATACAC---------------------ATGTTTGCATATAGAATATCAGACTCTTTATAGCATTTAAAATCTTTAAAGACatgaatattacct--ttta i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346673 94 + 185818997 C-----CTCTTTTCTTCTAATAGACATACAC-----------------------GTTTGTTTATAGAATATTGGACTCTTTATAGCATTTAAAATCTTTAAATACATGAATATTACCT--TTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992371 94 - 192294377 C-----CTCTTTTCTTCTAATAGACATACAC-----------------------GTTTGTTTATAGAATATTGGACTCTTTATAGCATTTAAAATCTTTAAATACATGAATATTACCT--TTTA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7572906 94 - 10077455 C-----CTCTTTTCTTCTAATAGACATACAC-----------------------GTTTGCTTATAGAATATTGGACTCTTTATAGCATTTAAAATCTTTAAATACACGAATATTACCT--TTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121512975 94 - 127223203 C-----CTCTTTTCTTCTAATAGACATACAC-----------------------ATTTGCTTATAGAACATTGGACTCTTTATAGCATTTAAAATCTTTAAATACACGAATATTACCT--TTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628488 94 + 1799296 C-----CTCTTTTCTTCTAATAGACATACAC-----------------------GTTTGCTTATAGAATATTGGACTCTTTATAGCATTTAAAATCTTTAAATACACGAATATTACCT--TTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180299 94 - 6934359 C-----CTCTTTTCTTCTAATAGACATACAC-----------------------GTTTACTTATAGAATATTTGACTCTTCATAGCATTTAAAATATTTAAATACATGAATATTACCT--TTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055473 96 + 128169293 G-----CTCTCTTCTTCTAATAGGCATATAT---------------------ATGTTTGCATATGGAATATCAAACTCGTTATGGCATTTAAAATCATTAAAGACATGAATATAACCC--TTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640801 96 + 18371965 C-----CTCTCTTCTTTTAATAGGCATACAT---------------------ATGTTTGCATATGGAATATCAGACTCATTATAGCATTTAAAATCATTAAAGACATGAATATAACAC--TTTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175702 96 - 3566421 C-----CTCTCTTCTTCTAATAGGCTTACAC---------------------ATGTTTGCATATGGAGTATCAGCCTCGTTGTAGCATTTAAAATCATTAAAGACGTTAATATAACCC--TTTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375132 96 + 9267652 C-----CTCTCTTCTTCTAATAGGCATACAG---------------------ATATTTGCATATGGAATATCAGACTCGTTATAGCATTTAAAGTCATTAAAGACATGAATATAAACC--TTTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587514 96 - 14340318 CT---TCTCTTTTCCTCTCCTAGACATACGA-----------------------ATGTGTATGGGGAATATCAGACTCTCTGTGGCCTTTTGAGCCTTTGAATACATGAATATAACCt--ttta i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081730 112 + 55844845 -----TCTCTCTCCCTCTCTTAGACATATAT----TTCTTAGACATAAATGTGTATATATGTATAAAATATCAGACTCTTTATAGCTTTTATTACCCTTAAAGACATGAATATAACAT--GCA- i canFam3.chr18 I 137 C 0 s dasNov3.JH578441 248170 123 - 1446996 -TATTTCTTTTTCTCTCTCATTGAAgtgcatgtgtctgtgtggtgtgtgtgtgtatgtgtgtgtAAAATATCAGCCTCCTTGTAGCTTCTAGAATTTTTAAAGACATGGATAAAACCTTATTTA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339482 240 - 3123512 I a score=377883.000000 s hg38.chr14_KI270725v1_random 110872 27 + 172810 ACAAATATAT-TTT-AGCATGTACTGAGA s panTro5.chr1 126672297 27 + 228573443 ACAAATATAT-TTT-AGCATGTACTGAGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671584 27 + 162613886 ACAAATATAT-TTT-AGCATGTACTGAGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91096 27 + 126596 ACAAATATAT-TTT-AGCATGTACTGAGA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682381 27 + 72422247 ACAAATATAT-TTT-AGCATGTACTGAGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120397 27 - 99891981 acaaatatat-ttt-agcatgtactgaga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346767 27 + 185818997 ACAAATATAT-TTT-AGCATGTACTGAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992465 27 - 192294377 ACAAATATAT-TTT-AGCATGTACTGAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339722 27 - 3123512 ACAAATATAT-TTT-AGCATGTACTGAGA i macNem1.NW_012011522v1 I 240 I 139 s cerAty1.NW_012000909v1 7573000 27 - 10077455 ACAAATATAT-TTT-AGCATGTACTGAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513069 27 - 127223203 ACAAATATAT-TTT-AGCATGTACTGAGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628582 27 + 1799296 ACAAATATAT-TTT-AGCATGTACTGAGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180393 27 - 6934359 ACAACTATAT-TTT-AGCATGTACTGAGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055569 27 + 128169293 ACAAAAATGC-TTT-AGCATGTACTTAGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17640897 27 + 18371965 ACAAAAATGT-TTT-TGCATGTACTGAGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175798 27 - 3566421 ACAAAAATGT-TTT-AGCATGTACTGAGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375228 27 + 9267652 ACAAATACGT-TTT-AGCATGTACTGAGA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587610 28 - 14340318 acaaatacatattt-ggcatatattaaga i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081842 28 + 55844845 ATAAATATAC-TTTCAGCATATATTGAGA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248293 28 - 1446996 TTAAGTATAT-TTTCAGTGTGTAATGACA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=98311.000000 s hg38.chr14_KI270725v1_random 110899 10 + 172810 ATCCCCTATT s panTro5.chr1 126672324 10 + 228573443 ATCCCCTATT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671611 10 + 162613886 ATCCCCTATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91123 10 + 126596 ATCCCCTATT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682408 10 + 72422247 ATCCCCTATT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120424 10 - 99891981 atcccctatt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346794 10 + 185818997 ATCTCCTATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992492 10 - 192294377 ATCTCCTATT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7573027 10 - 10077455 ATCTCCTATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513096 10 - 127223203 ATCTCCTATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628609 10 + 1799296 ATCTCCTATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180420 10 - 6934359 ATCTTCTATT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055596 10 + 128169293 ATCCTCTAtt i calJac3.chr8 C 0 I 306 s saiBol1.JH378145 17640924 10 + 18371965 ATCCTCTCTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175825 10 - 3566421 ATCCTCTCTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375255 6 + 9267652 ATCCTC---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587638 10 - 14340318 agcccataca i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081870 10 + 55844845 ATCTCCTATT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248321 10 - 1446996 TTCCCAtatt i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339749 139 - 3123512 I a score=1470460.000000 s hg38.chr14_KI270725v1_random 110909 153 + 172810 TATTTTTAATTTGGGCTAATCA--ATATGATTATTAATATTATTGGATTACCAAATTTGGA--------------------AGCACACTTTCATCCCCAAGGTGGATATTTGT---TTTATTTTTTTTTTGCCAATTTCTTGTGTTACTGTTTCAAATATTGTTGAAAATTATTTTTA s panTro5.chr1 126672334 151 + 228573443 TATTTTTAATTTGGGCTAATCA--ATATGATTATTAATATTATTGGATTACCAAATTTGGA--------------------AACACACTTTCATCCCCAAGGTGGATATTTGT---TTTA--TTATTTTTGCCAATTTCTTGTCTTACTGTTTCAAatattgttgtatattattttta i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671621 156 + 162613886 TATTGTTTATTTAGGGTAATCA--ATATGATTATTAATATTATTGGATCACCAAATTTGGA--------------------ATCACACTTTCATCCCCAAGGTGGatatatatatatatatatatTTTTTGCCAATTTCTTGTCTTACTGTTTCAAATATTGTTGGATATTATTTTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91133 149 + 126596 TATTTTTAATTT-GGCTAATCA--ATATGATTATTAATATTATTGGATTACCAAATTTGGA--------------------AACACACTTTCATCCCCAAGGTGGATATTTGT---TTT---TTTTTTTTGCCAATTTCTTGTCTTACTGTTTCAAATATTGTTGGATATTATTTTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682418 150 + 72422247 TATTTTTTATTTGGGCTAATCA--ATACGATTATTAATATTATTGGATTACCAAATTTAGA--------------------ATCACACTTTCATCCCCAAGGTGGATATTTGT---TTT---ATTTTTTTGTCAATTTCTTGTCTTACTGTTTCAAATATTGTTGGATATTATTTTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120434 146 - 99891981 tattttttatttgggctaatca--atatgattattaatattattggattaccaaatttgga--------------------atcacactttcatccccaaggtggatat-------ttt---atttttttgctaatttcttgtcttactgtttcaaatattgttggagattattttta i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346804 149 + 185818997 TATTTTTTATTTGGTCTAATCA--ATATGATTATTAATATTATTGGATTACCAAATTTGGA--------------------ATCACACTTTCATCCCCAAGGTGGATATTTGC---TTT---ATTGTTTTG-CAGTTTCTTGTCTTACTGTTTCAAATATTGTCGGAGATTATTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992502 149 - 192294377 TATTTTTTATTTGGTCTAATCA--ATATGATTATTAATATTATTGGATTACCAAATTTGGA--------------------ATCACACTTTCATCCCCAAGGTGGATATTTGC---TTT---ATTGTTTTG-CAGTTTCTTGTCTTACTGTTTCAAATATTGTCGGAGATTATTTTTA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7573037 149 - 10077455 TATTTTTTATTTGGTCTAATGA--ATATGATTATTAATATTATTGGATTACCAAATTTGTA--------------------ATCACACTTTCATCCCCAAGGTAGATATTTGT---TTT---ATTGTTTTG-CAGTTTCTTGTCTTACTGTTTCAAATATTGTTGGAGATTATTTTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513106 149 - 127223203 TATTTTTTATTTGGTCTAatga--atatgattattaatatgattggattaCCAAATTTGGA--------------------ATCACACTTTCATCCCCAAGGTGGATATTTGT---TTT---ATTGTTTTG-CAGTTTCTTGTCTTACTGTTTCAAATACTGTTGGAGATTATTTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628619 149 + 1799296 TATTTTTTATTTGGTCTAATGA--ATATGATTATTAATATTATTGGATTACCAAATTTGTA--------------------ATCACACTTTCATCCCCAAGGTAGATATTTGT---TTT---ATTGTTTTG-CAGTTTCTTGTCTTACTGTTTCAAATATTGTTGGAGATTATTTTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180430 149 - 6934359 TATTTTTTATTTGGTCTAatga--atatgattattactattattagattaCCAAATTTGGA--------------------ATCATACTTTCATCCCCAAGGTAGATATTTGT---TTT---ATTGTTTTG-CAGTTTCTTGTCTTACTGTTTCAGATGTTGTTGGAGATTATTTTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20055912 166 + 128169293 TATTTTTTATTTTGTATAATCA--ATACGATTGTTAATTTTATTGGATTTCAAAATTTGGATGAAAAATTTGGAAATTTTTATC-CACTTTCATCCCCAAGGTGGATATTTA------A---TTTTTTTTGCTAATTTCTTGTATTACTGCTTCAAATATTGTTGGAAATTATTTTTA i calJac3.chr8 I 306 C 0 s saiBol1.JH378145 17640934 150 + 18371965 CATTTTTTAATTTGTCTAATGA--ATATGATTGTGAATATTATTGGATTTCCAAATTTGGG--------------------ATCACACTTTCATCCCCAAGGTGGATATTTGT---TTA---ATTTTTTTGCTAATTTCTTGTATTACCATTTCAAATATTGTTGGAAATTATTTTTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175835 148 - 3566421 TATTTTTTATTTTGTCTAATCA--ATATGATTGTTAATTTTATTGGATTTCCAAATTTGGG--------------------ATCACACTTTCATCCCCAAGGTGGATATTTGT---TTA---ATTTTTTTGCTAATTGCTTGTATTA--GTTTCAAATATTATTAGAAATTATTTCTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375261 150 + 9267652 TATTTTTTATTCTGTCTAATCA--ATATGATTGTTAATTTTATTGGATTACCAAATTTGGG--------------------ATCACACTTTCATCCCAAAGGTAGATATTTGT---TTA---ATTTTTTTGTGAATTTCTTGTATTACTGTTTCAGGTATTGTTGGAAATTATTTTTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587648 136 - 14340318 tattttttatttgatctgattaatatatgattatttttgttatggaattatctaatgtgaa--------------------atcacactttcatttgtaaggtgaaaatctat---taa---atcttat---taatttctcattctaatatttcacatattttta------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4081880 126 + 55844845 ----TTTTATCTATTCTAATTA--ATAAGGTTATTTATATCATTTGATT--------CAGA--------------------ATTACATTTGAATTC-AAAGGTGAAAATTTGC---TTA---ATAT------TGCTTTTTTGTATGGATGTTTCAAATACTGTTGTAGATTAC----- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248331 147 - 1446996 taatttttattcattttattta--atattat--tttatactatttgattACCTGATATGAA--------------------ATTAAACTCCCATTCTTATGTCAGAAATTTGT---TTA---ATCTTGTTAATTATGT-TTGTGTTAACGCTTCAGATTTTGTTGGAGTCTATTTCTA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 339749 139 - 3123512 I a score=358196.000000 s hg38.chr14_KI270725v1_random 111062 32 + 172810 TTTTATTTGGCAT-----TTTAGTATCAACATTTG--CA s panTro5.chr1 126672485 32 + 228573443 ttttatttGGCCT-----TTTAGTATCAACATTTG--TA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671777 32 + 162613886 TTTTATTTGGCAT-----TTTAGTATCAATATTTG--TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91282 32 + 126596 TTTTATTTGGCAT-----TTTAGTATCAACATTTG--TA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682568 32 + 72422247 TTTTATTTGGCAT-----TTTAGTGTCAATATTTG--TA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120580 32 - 99891981 ttttatttggcat-----tttagtatcaatgtttg--ta i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346953 32 + 185818997 TTTTATTTGGCAT-----TTTAGTATCAATATTTG--TA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992651 32 - 192294377 TTTTATTTGGCAT-----TTTAGTATCAATATTTG--TA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339888 28 - 3123512 TTTTATTTGGCA------TTTAGTATCAATATTT----- i macNem1.NW_012011522v1 I 139 C 0 s cerAty1.NW_012000909v1 7573186 29 - 10077455 TTTTATTTGGCAT-----TTTAGTATCAATATTT----- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513255 29 - 127223203 TTTTATTTGGCAT-----TTTAATATCAATATTT----- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628768 32 + 1799296 TTTTATTTGGCAT-----TTTAGTATCAATATTTG--TA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180579 32 - 6934359 TTTTATTTGGCAT-----TTTAGTATCAATATTTG--TA i colAng1.NW_012115910v1 C 0 I 7 s calJac3.chr8 20056078 37 + 128169293 TTTTATTTGGCATTTTAGTTTAGTATCAATATTTG--TA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641084 39 + 18371965 TTTTATTTGGCATTTTAGTTTAGTATCAATATTTGTATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2175983 36 - 3566421 TTGCA-TTGGCATTTTAGTTTAGTATCAATATTTG--TA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375411 37 + 9267652 TTTTATTTGGCATTTTAGTTTAGTATCAATATTTG--TA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587784 32 - 14340318 ttttatcaggcct-----ttttgtatcaatatttg--ta i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4082006 32 + 55844845 TTTTGTTTGGCAT-----TTTTGTATAAATATTTA--TA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 248478 31 - 1446996 TTTAATTTGGTAT-----TTTA-CACAAGTGCTTT--CA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=149116.000000 s hg38.chr14_KI270725v1_random 111094 16 + 172810 ATTGAGG---T---ACTCTACA---- s panTro5.chr1 126672517 16 + 228573443 ATTGAGG---T---ACTCTACA---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671809 16 + 162613886 AGTGATG---T---ACTCTACA---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91314 16 + 126596 ATTGAGG---T---ACTCTACA---- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682600 16 + 72422247 AGTGATG---A---ACTCTACT---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120612 16 - 99891981 agtgatg---t---actctaca---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52346985 16 + 185818997 AGTGAGA---T---ACTCTACA---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992683 16 - 192294377 AGTGAGA---T---ACTCTACA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339916 15 - 3123512 -GTGAGA---T---ACTCTACA---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7573215 15 - 10077455 -GTGAGA---C---ACTCTACA---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513284 15 - 127223203 -GTGAGA---T---ACTCTACA---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628800 16 + 1799296 AGTGAGA---T---ACTCTACA---- i manLeu1.NW_012105809v1 C 0 C 0 s calJac3.chr8 20056115 16 + 128169293 AGTGATG---T---ACTCTACA---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641123 16 + 18371965 AGTGATG---T---ACTCTACA---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176019 16 - 3566421 AGTGATG---T---ACTCTACA---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375448 16 + 9267652 AGTGATG---T---ACTCTACA---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587816 19 - 14340318 agtgatatttt---actctgca---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4082038 19 + 55844845 AGTCATA---TTGCACTCTACA---- i canFam3.chr18 C 0 I 2 s dasNov3.JH578441 248509 13 - 1446996 ----------T---ACTGTACTAATT i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e colAng1.NW_012115910v1 5180611 7 - 6934359 I a score=374002.000000 s hg38.chr14_KI270725v1_random 111110 33 + 172810 TATTTTTTCTTCAATATCTGGTGGGTTTTATAT s panTro5.chr1 126672533 33 + 228573443 TATTTTTTCTTCAATATCTGGTGGGTTTTATAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671825 33 + 162613886 TATTTTTTCTTCAATATCTGGTGGGTTTTATAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91330 33 + 126596 TATTTTTTCTTCAATATCTGGTGGGTTTTATAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682616 33 + 72422247 TATTTTTTCTTCAGTATCTGGTGGGTTTTATAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120628 33 - 99891981 tattatttcttcaatctctggtgggttttataa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347001 33 + 185818997 TATTTTTTCTTCAATATCTGGTGGATTTTATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992699 33 - 192294377 TATTTTTTCTTCAATATCTGGTGGATTTTATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339931 33 - 3123512 TATTTTTTTCTTAATATCTGGTGGATTTTATCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7573230 33 - 10077455 TATTTTTTCTTCAGTATCTGGTGGGTTTTATAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513299 33 - 127223203 TATTTTTTCTTCAATATCTGGTGGGTTTTGTAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628816 33 + 1799296 TATTTTTTCTTCAGTATCTGGTGGGTTTTATAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180618 33 - 6934359 TATTTTTTCTTCAGTATCTGGTGGGTTTTATAA i colAng1.NW_012115910v1 I 7 C 0 s calJac3.chr8 20056131 30 + 128169293 TATTTTTTCTTCAATATCTGCTGGGTTTTA--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641139 33 + 18371965 TATTTTTTCTTCAGTATCTGCTGGGTTTTATAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176035 33 - 3566421 TATTTTTTCTTCAGTATCTTCTAGGTTTTATAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375464 21 + 9267652 TATTTT------------TGCTGAGTTTTATAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587835 27 - 14340318 ---tttttttacagtacctgttgggtttta--- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4082059 33 + 55844845 TATATTTTTTATAATATCCGTTACATTTTATAA i canFam3.chr18 I 2 C 0 s dasNov3.JH578441 248522 32 - 1446996 TCTTTTTTCTCTAATCTCTGGC-TATTTTGTAT i dasNov3.JH578441 C 0 I 4121 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=971504.000000 s hg38.chr14_KI270725v1_random 111143 101 + 172810 TTACTGTTATATTGG-ATTTGTA-GTAGACATTGACAAAAA----TTATTGCTGTATGTTTTATAGCTGTAtgaaggaaact--------------------------------------------------------------------------aatatattttacc----cctaaatatatt s panTro5.chr1 126672566 101 + 228573443 TTACTGCTATATTGG-ATTTGTA-GTAGACATTGACAAAAA----TTATTCCTGTAGGTTTTATAGCTGTAtgagggaaact--------------------------------------------------------------------------aatatattttacc----cctaaatatatt i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671858 101 + 162613886 TTACTGCTATATTGG-ATTTGTA-GTAGACATTGACAAAAA----TTATTTCTGTATGTTTTATAGCTGTAtgaaggaatct--------------------------------------------------------------------------aatatattttacc----ccaaaatatatt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91363 101 + 126596 TTACTGCTATATTGG-ATTTGTA-GTAGACATTGACAAAAA----TTATTCCTGTATGTTTTATAGCTGTAtgagggaaact--------------------------------------------------------------------------aatatattttacc----cctaaatatatt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682649 57 + 72422247 TTACTGCT-TATTGGAATTTGAG-GTGAAAATTGACAAAAA----TTATTCCCG---GTTTTGT-----------------------------------------------------------------------------------------------------------------------TT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120661 101 - 99891981 ttactgctatattgg-atttgta-GTAGACATTGACACAAA----TTATTTCTTTATGTTTCATAGCTGTAtgaaggaaacc--------------------------------------------------------------------------aatatattttacc----ccaaaatatatt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347034 101 + 185818997 TTACTGCTATATTGG-ATCTGTA-GTAGATATTGACAAAAA----TTATTTCTTTATGTTTTATAGCTGTAtgaaggaaatc--------------------------------------------------------------------------aacatattttacc----ccaaaatatgtt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992732 101 - 192294377 TTACTGCTATATTGG-ATCTGTA-GTAGATATTGACAAAAA----TTATTTCTTTATGTTTTATAGCTGTAtgaaggaaatc--------------------------------------------------------------------------aacatattttacc----ccaaaatatgtt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 339964 98 - 3123512 TACTGGCTATA-TGG-ATCTGTAGGTAGATATTGAC-AAAA----TTATTTCTTTATGTTTTATAGCTGTATGaa-gaaatc--------------------------------------------------------------------------aacatattttacc----cc-aaatatgtt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7573263 101 - 10077455 TTACTGCTATATTGG-ATCTGTA-ATAGATATTGACAAAAA----TTATTTCTTTATGTTTTATGGCTGTAtgaaggaaacc--------------------------------------------------------------------------aatatattttacc----ccaaaatatatt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513332 101 - 127223203 TTACTGCTGTATTGG-ATCTGTA-GTAGATATTGACAAAAA----TTATTTCTCTATGTTTTATAGCTGTAtgaaggaaacc--------------------------------------------------------------------------aatatattttacc----ccaaaatatatt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 628849 101 + 1799296 TTACTGCTATATTGG-ATCCGTA-GTAGATATTGACAAAAA----TTATTTCTTTATGTTTTATGGCTGTAtgaaggaaacc--------------------------------------------------------------------------aatatattttacc----ccaaaatatatt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180651 101 - 6934359 TTACTGCTATATTGG-ATCTGTA-GTAGATATTGGCAAAAA----TTATTTCTCTATGTTTTATAGCTGTAtgaaggaaacc--------------------------------------------------------------------------aatatattttacc----ccaaaatatatt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056161 101 + 128169293 TTACTGCTATACTGG-ATTTGTA-GAAGATATTAACAAAAA----TTATATGTCTATGTTTTATAGCTGTAtgaagaaaacc--------------------------------------------------------------------------aatatatttcacc----ccaaaaaatatt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641172 97 + 18371965 TTACTGCTATATTGG-ATTTGTA-GAAGATATTAACAAAAA----TTA----TTTATGTTTTATAGCTGTAtgaagaagacc--------------------------------------------------------------------------aatatatttcacc----ctaaaatatatt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176068 101 - 3566421 TTACTGCTATATTGG-ATTTGTA-GAAGATATTAACAAAAA----TTATTTATCTATGTTTTATAGCTGTAtgaagaaaacc--------------------------------------------------------------------------aatatatttcacc----ctaaaatatatt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375485 101 + 9267652 TTACTGCTATATTGG-ATTTGTA-GAAGATATTAACAAAAA----TTATTTATCTATGTTTTATAGCTGTATCaagaaaacc--------------------------------------------------------------------------aatatatttcacc----ctaaaatatatt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1587862 165 - 14340318 --------atgttaT-AACTGTA-TTGAAAATTGGCGAGAA------AATTCTGTATATTCAATAGCCATATGAAGCAAACCAAAATATTTCATGTGAAAACCCCACACTGTACCCCAGAAGTGCATTAATGTACATAGTTACCATTCAATAAAAAaaaatatttcacc----ccaaaatgtatt i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4082092 108 + 55844845 TTACTGCAATATTGG-ATTTATA-GAAGGAATTAGCAAAAAAATATTATTTCTCTATGTTCTCTAAGCATACAACCAAAAAT---------------------------------------------------------------------------ATATACATTACCTGATTCTTAATATCTT i canFam3.chr18 C 0 I 1320 e dasNov3.JH578441 248554 4121 - 1446996 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=219831.000000 s hg38.chr14_KI270725v1_random 111244 34 + 172810 t------------------------------ccttgatatatttcaaaatggctattgagaag-g- s panTro5.chr1 126672667 34 + 228573443 t------------------------------ccttgatatatatcaaaatggctattgagaag-g- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671959 34 + 162613886 t------------------------------ccttgatatatttcaaaatggctattcagaag-g- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91464 34 + 126596 t------------------------------ccttgatatatttcaaaatggctattgagaag-g- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682706 31 + 72422247 TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------------------- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120762 34 - 99891981 t------------------------------ccttgatatatttcaaaatggctattcagaag-g- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347135 32 + 185818997 t------------------------------ccttgatatatttc-aaatggctattcagagg--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992833 32 - 192294377 t------------------------------ccttgatatatttc-aaatggctattcagagg--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 340062 31 - 3123512 t------------------------------ccttgatat-tttc-aaatggctattcagagg--- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7573364 32 - 10077455 t------------------------------ccttgatatatttc-aaatggctattcagagg--- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513433 33 - 127223203 t------------------------------ccttgatatatttc-aaatggctattcagaagg-- i chlSab2.chr21 C 0 I 18 s manLeu1.NW_012105809v1 628950 32 + 1799296 t------------------------------ccttgatatatttc-aaatggctattcagagg--- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180752 32 - 6934359 t------------------------------ccttgatatatttc-aaatggctcttcagagg--- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056262 33 + 128169293 t------------------------------ccttgacatatttcaaaatggctattcagaag--- i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17641269 33 + 18371965 t------------------------------ccttggcatatttcaaaatggctattcagaag--- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2176169 29 - 3566421 t------------------------------ccttgacatatttcaaaatgactat----ggg--- i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 7375586 33 + 9267652 t------------------------------ccttgacctatttcaaagtggctattcagaag--- i aotNan1.NW_018514471v1 C 0 I 1 s otoGar3.GL873564 1588027 34 - 14340318 t------------------------------ccttgacatatttcaagtcagctattcagaag--g i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=169008.000000 s hg38.chr14_KI270725v1_random 111278 14 + 172810 gctggaaatgcaaa s panTro5.chr1 126672701 14 + 228573443 gctggaaatgcaaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 74671993 14 + 162613886 gctggaaatgcaaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91498 14 + 126596 gctggaaatgcaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682737 10 + 72422247 ----GAAAAGCAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120796 14 - 99891981 gctggaaatgcaaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347167 14 + 185818997 gctggaaatgcaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124992865 14 - 192294377 gctggaaatgcaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 340093 14 - 3123512 gctggaaatgcaaa i macNem1.NW_012011522v1 C 0 I 328 s cerAty1.NW_012000909v1 7573396 14 - 10077455 gctggaaatgcaaa i cerAty1.NW_012000909v1 C 0 C 0 s manLeu1.NW_012105809v1 628982 14 + 1799296 gctggaaatgcaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180784 14 - 6934359 gctggaaatgcaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056296 14 + 128169293 gctggaaatgcaaa i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17641303 14 + 18371965 gctggaaatgcaaa i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2176199 14 - 3566421 gctggaaatgcaaa i cebCap1.NW_016107540v1 I 1 C 0 s aotNan1.NW_018514471v1 7375620 14 + 9267652 gctggaaatgcaaa i aotNan1.NW_018514471v1 I 1 C 0 s otoGar3.GL873564 1588061 14 - 14340318 gctggaaatgcaaa i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e chlSab2.chr21 121513466 18 - 127223203 I a score=3125.000000 s hg38.chr14_KI270725v1_random 111292 4 + 172810 ctta s panTro5.chr1 126672715 4 + 228573443 gtta i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672007 4 + 162613886 ctta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91512 3 + 126596 -tta i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682747 4 + 72422247 CACA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120810 4 - 99891981 aata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347181 1 + 185818997 ---a i rheMac8.chr3 C 0 I 3 s macFas5.chr3 124992879 1 - 192294377 ---a i macFas5.chr3 C 0 I 3 s cerAty1.NW_012000909v1 7573410 1 - 10077455 ---a i cerAty1.NW_012000909v1 C 0 I 3 s manLeu1.NW_012105809v1 628996 1 + 1799296 ---a i manLeu1.NW_012105809v1 C 0 I 3 s colAng1.NW_012115910v1 5180798 4 - 6934359 aaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056310 4 + 128169293 aata i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641317 4 + 18371965 aaga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176213 4 - 3566421 aata i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375634 4 + 9267652 atta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1588075 4 - 14340318 aata i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e chlSab2.chr21 121513466 18 - 127223203 I e macNem1.NW_012011522v1 340107 328 - 3123512 I a score=59928.000000 s hg38.chr14_KI270725v1_random 111296 5 + 172810 gctgc s panTro5.chr1 126672719 5 + 228573443 gctgc i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672011 5 + 162613886 gctgc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91515 5 + 126596 gctgc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682751 5 + 72422247 Gctgc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120814 5 - 99891981 gctgc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347185 5 + 185818997 gctgc i rheMac8.chr3 I 3 C 0 s macFas5.chr3 124992883 5 - 192294377 gctgc i macFas5.chr3 I 3 C 0 s cerAty1.NW_012000909v1 7573414 5 - 10077455 gctgc i cerAty1.NW_012000909v1 I 3 I 316 s chlSab2.chr21 121513484 5 - 127223203 gctgc i chlSab2.chr21 I 18 C 0 s manLeu1.NW_012105809v1 629000 5 + 1799296 gctgc i manLeu1.NW_012105809v1 I 3 C 0 s colAng1.NW_012115910v1 5180802 5 - 6934359 gctgc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056314 5 + 128169293 gctgc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641321 5 + 18371965 gctgc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176217 5 - 3566421 gctgc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375638 5 + 9267652 gctgc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1588079 5 - 14340318 gctta i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e macNem1.NW_012011522v1 340107 328 - 3123512 I a score=77420.000000 s hg38.chr14_KI270725v1_random 111301 7 + 172810 aaagctg s panTro5.chr1 126672724 7 + 228573443 aaagctg i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672016 7 + 162613886 aaagctg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91520 7 + 126596 aaagctg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682756 7 + 72422247 aaagctg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120819 7 - 99891981 aaagctg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347190 7 + 185818997 aaagctg i rheMac8.chr3 C 0 I 328 s macFas5.chr3 124992888 7 - 192294377 aaagctg i macFas5.chr3 C 0 I 328 s macNem1.NW_012011522v1 340435 7 - 3123512 aaagcta i macNem1.NW_012011522v1 I 328 C 0 s cerAty1.NW_012000909v1 7573735 7 - 10077455 aaagctg i cerAty1.NW_012000909v1 I 316 C 0 s chlSab2.chr21 121513489 7 - 127223203 aaagctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 629005 7 + 1799296 aacgctg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5180807 7 - 6934359 aaagctg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056319 7 + 128169293 aaaactc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641326 7 + 18371965 aaagctc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176222 7 - 3566421 aaagctc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375643 7 + 9267652 aaaactc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1588084 7 - 14340318 aaagttg i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=43146.000000 s hg38.chr14_KI270725v1_random 111308 3 + 172810 tct s panTro5.chr1 126672731 3 + 228573443 tct i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672023 3 + 162613886 tct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91527 3 + 126596 tct i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682763 3 + 72422247 tct i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120826 3 - 99891981 tct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347525 3 + 185818997 tct i rheMac8.chr3 I 328 C 0 s macFas5.chr3 124993223 3 - 192294377 tct i macFas5.chr3 I 328 C 0 s macNem1.NW_012011522v1 340442 3 - 3123512 tct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7573742 3 - 10077455 tct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513496 3 - 127223203 tct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 629012 3 + 1799296 tct i manLeu1.NW_012105809v1 C 0 T 6035 s colAng1.NW_012115910v1 5180814 3 - 6934359 tct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056326 3 + 128169293 tct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641333 3 + 18371965 tct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176229 3 - 3566421 tct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375650 3 + 9267652 tct i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1588091 3 - 14340318 tct i otoGar3.GL873564 C 0 I 4 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=2756106.000000 s hg38.chr14_KI270725v1_random 111311 281 + 172810 tggggagatttgcactgttagagaatctgccttgatgcagccaggctttctctgagttctgcccccttgtctggatctaggaaaggttaactgagagtctgaggtctccaaaggtctgaaagaaaca------ttttctgtctatttctctctgaggactgctcccagtgaggttccacctatgtaataagtccactgttgctagtcagg-gtcgttttctcac------ataacc----tt-----ttttTTTttttccctgtgatccaagaccccattctttctgtaaacttcatgtggta s panTro5.chr1 126672734 280 + 228573443 tggggagatttgcatcagtagagaatctgccttgatgcagccaggctttctctgaggtctgcccccttgtttggatctaggaaagtttaactgagagtctgaggtctccaaaggtctgaaagaaaca------ttttctgtcta-ttctctctgaggactgctcctagtgaggttccacctaggtaataagtccactgttgctaaccagg-gtcgttttctcac------ataacc----tt-----tcttttttttcccctgtgatccaagaccccattctttttgtaaacttcatgtggta i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672026 276 + 162613886 tggggagatttgcatttgtagagaatctactttgatgcagccaggctttctctgaggtctgctaaattgtctggatctaggaatggttaacttagcgtctgaggtctccaaaggtctgaaagaaaca------ttttctgtcta-ttctctctgaggcctgctcccagtgaggtttcatctacgtaataagtccactgttgctagtcagg-gtccttttctcac------ataacc-------------ttttttttcccctgtgatccaagaccccattctttctgtaaacttcatgcggta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91530 276 + 126596 t-gggagatttgcatcggtagagaatctgccttgatgcagccaggctttctctgaggtctgcccccttgtctggatctaggaaag-ttaactgagagtctgaggtctccaaaggtctgaaagaaaca------ttttctgtcta-ttctctctgaggactgctcccagtgaggttccacctatgtaataagtccactgttgctagccagg-gtcgttttctcac------ataacc----tt-------tttttttttccctgtgatccaagaccccattctttctgtaaacttcatgtggta i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5682766 285 + 72422247 tggggagatttgcatcagtagagaatctgccttgatgcagccaggctttctctgaggtctgcccccttgtctggatctaggaaaggttaactgagagtctgaggtctccaaaggtctgaaagaaaca------ttttctgtcta-ttctctctgaggactgctcccagtgaggtttcaccgacgtaataagtccactgttggtagctagg-gtccttttctcac------ataact----ttttttttttttttttttccctgtgatccaagaccccattctttctgtaaacttcatgtggta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44120829 264 - 99891981 tggggagatttgtatcagtagagaatctgctttgatgcagccaggctttctctgaggtctgcccccttggctggatctaggaaaggttaactgagagtctgaggtctccgaaggtctgaaagaaaca------ttttctgtcta-ttctctcggagggctgctcccagtgaggttt-----------------cactgttgctagccagg-gtctttttctcac------ataact----tt----ttttttttttccccctgtgatccaagcccctattctttctgtaaactcgatgtggtc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347528 287 + 185818997 cagggagatttgcatctatagagaatctgccttgatgcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacctccataggtctgagagaaacattttctttttctatctg-ttctctccgagggccactcccagtgaagtttcacctatgtaacaagaccactgttactagccaag-gtccttttctctc------ataatc----tt----ttttttttttttttctgtgatccaagtccccattctttctgtaaactcagtatggta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124993226 287 - 192294377 cagggagatttgcatctatagagaatctgccttgatgcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacctccataggtctgagagaaacattttctttttctatctg-ttctctccgagggccactcccagtgaagtttcacctatgtaacaagaccactgttactagccaag-gtccttttctctc------ataatc----tt----ttttttttttttttctgtgatccaagtccccattctttctgtaaactcagtatggta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 340445 288 - 3123512 cagggagatttgcatctatagagaatctgccttgatgcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacctccataggtctgaaagaaacattttctttttctatctg-ttctctccgagggccactcccagtgaagtttcacctatgtaacaagaccactgttactagccaag-gtccttttctctc------ataatc---ttt----ttttttttttttttctgtgatccaagtccccattctttctgtaaactcagtatggta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7573745 285 - 10077455 cagggagatttgcatctatagagaatctgccttgatgcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacctccataggtctgagagaaaca------ttttctgtctg-ttctctctgagggccactcccagtgaagtttcacctatgtaacaagaccactgttactagccagg-gtccttttctctc------ataacctttttt----ttttttttttctttctgtgatccaagtccccattctttctgtaaactcaatatggta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513499 275 - 127223203 cagggagatttccatctgtagagaatctgccttgatgcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacctccaaaggtctgagataaaca------ttttgtatctg-ttctctctgagggccacttccagtgaagtttcacctatgtaacaagaccactgttgctagccagg-gtccttttgtctc------ataatc--------------ttttttttttctgtgatccaagtccccaatctttctataaactcaatgtggta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 622980 281 + 1799296 cagggagatttgcatctatagagaatctgccttgatgcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacctccataggtctgagagaaaca------ttttctgtctg-ttctctctgagggccactcccagtgaagtttcacctatgtaacaagaccactgttactagccagg-gtccttttctctc------ataacc----tt----ttttttttttttttctgtgatccaagtccccattctttctgtaaactcaatgtggta i manLeu1.NW_012105809v1 T 6035 C 0 s colAng1.NW_012115910v1 5180817 284 - 6934359 cggggagatttgcacctgtagagaatctgccttgaggcagccaggttttctctgaggtctgcccccttgtctggatctaggaaaagttaactgagagtctgagacttccataggtctgagagaaaca------ttttctgtctg-ttctgtctgagggccacttccagtgaagtttcagctgtgtaccaaaaccactgttgctagccaga-gtccttttctctc------ataact-ccccg----ttttttttttttttctgtgatccaagtccccattctttctgtaaactcagtgtggta i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056329 252 + 128169293 tggggagatttgtacctgtagagaatctggtttgatgcacccaggctttctctgaggtctgtccccttgtctggatctaggaaaggtaaactgagagtctgaagcctctaaaggtctgaaagaaaca------gtttctgt------------------ttctcccagtgagatttcatctacgtaacaagaccactgttgctagtcagg-gtccttt----------------------tc----taccttttttttcccggtgatctaagtccccattctttctgtaacttcagcgtggta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641336 275 + 18371965 tggggagatttgtagctgtagagaatctgacttgatgcacccaggctttctccaaggtctgtccccttgtctggttctaggaaaggtaaatggagagtctgaagcctctaaaggtctgaaagaaaca------gtttctgtcta-tcccctctgagggcttctcccagtgagatttcatctacgtaacaagaccactgttgctagttagg-gtccttttttcta----------------tc----tttttttttttttccggtgatctaagcccccattctttctgtaacttcagcggagtg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176232 260 - 3566421 tggggagatttgtacctgtagagaatctggcttgatgcacccaggctttctctgaggtctgtcccctggtcaggatctaggaattgtaaaatgagagtctgaagcctctaaaggtctgaaagaaaca------gtttctgtcta-tcctttctgagggcttctcccagtgagatttcatctacacaacaagaccactgttgctagtcagg-gtccttttccc------------------tc----tctctttttttttccggtga-------------tctttctgtcacttcagcgttgta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375653 275 + 9267652 tggggagatttgtacctgtagagaatctggcttgatgcacccaggctttctctgaggtctgtcctcttgtctggatctaggaaaggtaaactgagagtctgaagtctctagaggtctgaaagaaaca------gtttctgtcta-tcctctctgagggcttctcccagtgagatttaatctacgtaacaagaccactgttgctagtcagg-gtccttttctctc----------------ta----tctttttttttttctggtgatctaagcccccattctttctgtaacttcagtgtggta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1588098 273 - 14340318 tggggagatttgcctccagagagaggttgctctgccgtagcctggttttctctgaggcc--ctcccttggc-agacctggagaagtttagctgaggagctgacatttttaaaggtctgaaggaaaca------tatatcatcta---ccttctgagggctgctacctgtgatctttcattt-tataaaaagaccacctttgctagccaggcctcctcttttctctgtcctataacc----tg-------------ttttgccaggatccaagcctttgttctttctgcatcctcaagatggta i otoGar3.GL873564 I 4 I 968 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=1743396.000000 s hg38.chr14_KI270725v1_random 111592 166 + 172810 gataagcttctgcacgcatcgtgtg-------tctgggtcttcgttctaagggctccagtgtacacacattgcagaaac-----ctgtatgccttttctactatttatctgcctcctattagt-gattttcagggaaacttcagaaggcaaaagggacattctcctttagcccATTCTC s panTro5.chr1 126673014 166 + 228573443 gaaaagcttctgcacgcatcgtgtg-------tctgggtcttcgttctaagggctccagtgtacacatattgcagaaac-----ctgtatgccttttctactatttatctgcctcctattagt-gattttcagggaaacttcagaaggcaaaagggacattctccgttagcccATTCTC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672302 166 + 162613886 gataagcttctgcacccatcttgtg-------tctgcgtcttcattctaagggctccagtgtacacacattgcagaaac-----ctgtatgccttttctactatttatctgcctcctattagt-gattttcagggaaacttcagaaggcaaaagggacattctcctttagcctatacGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91806 166 + 126596 gataagcttctgcacgcatcgtgtg-------tctgggtcttcgttctaagggctccagtgtacacacattgcagaaac-----ctgtatgccttttctactatttatctgcctcctattagt-gattttcagggaaacttcagaaggcaaaagggacattctcctttagcccATTCTC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5683051 166 + 72422247 gataagcttctgtacccatcgtgtc-------tctgggtctccattctaagggctccagtgtacacacattgcagaaac-----ctgtatgccttttctactatttatctgcctcctattagt-gattttcagggaaacttcagaaggcaaaagggacattctcctttagcccatacTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44121093 163 - 99891981 aataagcttcggcacccatcatgtg-------tctgggtcttcattctaagggctccagtgtacacacattgcagaaag-----ctgtatacatttt---ctatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaagggacattctcccttagcctatacCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347815 173 + 185818997 gataagcttctgcacccaccgtgtggctgggtcctgggtcttcattctaagggctccagtgtacacacattacagcaat-----ctgtaagccttttctactatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaagggacattctcccttagcccatacCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124993513 173 - 192294377 gataagcttctgcacccaccgtgtggctgggtcctgggtcttcattctaagggctccagtgtacacacattacagcaat-----ctgtaagccttttctactatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaagggacattctcccttagcccatacCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 340733 173 - 3123512 gataagcttctgcacccaccgtgtggctgggtcctgggtcttcattctaagggctccagtgtacacacattacagcaat-----ctgtaaggcttttctactatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaagggacattctcccttagcccatacCC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7574030 173 - 10077455 gataagcttctgcacccaccgtgtggctgggtcctgggtcttcattctaagggctccagtgtacacacattacagcaat-----ctgtaagccttttctactatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaagggacattctcccttagcccatacCC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513774 173 - 127223203 gataagcttctgtacccaccgtgtgactgggtcctgggtcttcattctatgggctccagggtacacacattacagaagc-----ctgtatgccttttctactatttatctgcctcctgttatt-gattttcagggaatcttcagaaggcaaaagggacattctcccttagcccatacCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 623261 173 + 1799296 gataagcttctgcacccaccgtgtggctgggtcctgggtcttcattctaagggctccagtgtacacacattacagcaat-----ctgtaagccttttctactatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaaggtacattctcccttagcccatacCC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5181101 173 - 6934359 gataagcttctgcacccaccatgtggctgggtcctgggtcttcattctaagggctccagtgtacacacattacggaaaa-----ctgtatgccttttctactatttatctgcctcctgttagt-gattttcagggaatcttcagaaggcaaaatgaacattctcccttagcccatacCC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056581 167 + 128169293 gattagcttctgtatccatcatgtg-------gttgggtcttcattctgagggcccccacatacacacattacagaaac-----ctgtatgctttttctgctattcatctgcctcctttcagatgattttcagggaaacttcagaaggcaaaatgaacattctcccttaacccatacCC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641611 166 + 18371965 gattagcttctgtacccatcacgtg-------gctgggtcttcattctgagggcccccacatacacacattacagaaac-----ctgaaagccttttctgctatttatctgcctcctgtcaaa-gattttcagggaaacttcagaaggcaaaagggacattctcccttaacccatacCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176492 171 - 3566421 gattagcttctgtacccatcatgtg-------gctgagtcttcattctgagggcccctacatacacacattacagaaacctgtactgtatgccttttctgctatttatctgcctcctgtcagt-gattttcagggaaacttcagaaggcaaaagggacattctcccctaacccataGCC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7375928 164 + 9267652 gattagcttctgtacccatcatgtg-------gctgggtcttcattctgagggcccccacatacacacgttacagaaac-----ctgtatgactttcctgctatttatctgcctcctgtct---gattttcagggaatcttcagaaggcaaaagggacattctcccttaacccatacTC i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1588371 968 - 14340318 I a score=1992616.000000 s hg38.chr14_KI270725v1_random 111758 171 + 172810 AGAC-AAAATCCCCCAACATTTAACTGATTCCTAATAGCTTA--AAATCACTTTGAAAAATCCGTATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTCATTCCATTTACTTCATCCTCGAAAAGATCTA-TTTTACGTCTATTTATTCTCA s panTro5.chr1 126673180 171 + 228573443 AGAC-AAAATCCCCCAACATTTAACTGATTCCTAATAGCTTA--AAATCACATTGAAAAATCCATTTATTTATAACCTTTTCTTCCCTTTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTCATTCCATTTACTTCATCCTCGAAAAGATCTA-TTTTACGTCTATTTATTCTCA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672468 171 + 162613886 AGAC-AAAATCCCCCAGCATTTAACTGATTCCTAATAGCTTA--AAATCACTTTGAAAAATCCATATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTATTCCATTTACTTCATCCTCGAAAAGATCTA-TTTTATGTCTATTTATTCTCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 91972 171 + 126596 AGAC-AAAATCCCCCAACATTTAACTGATTCCCAATAGCTTA--AAATCACTTTGAAAAATCCATATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTCATTCCATTTACTTCATCCTCGAAAAGATCTA-TTTTACGTCTATTTATTCTCA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5683217 171 + 72422247 AGAC-AAAATCCCCCAACATTTAACTGATTCCTAATAGCTTA--AAATCACTTTGAAAAATCCATATATTTATAACCTTTTCTTTCCTCTGTGATTCCTGGTCAGCTTGGGTTTTGTTTTTTATTCCATTTACTTCATCCTTGAAAAGATCTA-TTTTATGTCTATTTATTCTCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44121256 171 - 99891981 AGAC-AAAATCCCCCAACATTTAACTGATTCCTGATAGGTTA--ACATCACTTTGAAAAATCTATATAATTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTCCATTTACTTCATCCTCGAAAAGATCTA-TTTTATGTCTATTTATTCTCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52347988 171 + 185818997 AGGC-AAAATCCCCCAACATTTAACTGATTCCTGGTAGCTTA--ACATCACTTTGAAAGATCTATATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTCATCCTCAAAAAGATCTA-TTTTATGTCTATTTATTCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124993686 171 - 192294377 AGGC-AAAATCCCCCAACATTTAACTGATTCCTGGTAGCTTA--ACATCACTTTGAAAGATCTATATATTTATAACTTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTCATCCTCAAAAAGATCTA-TTTTATGTCTATTTATTCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 340906 171 - 3123512 AGGC-AAAATCCCCCAACATTTAACTGATTCCTGGTAGCTTA--ACATCACTTTGAAAGATCTATATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTCATCCTCAAAAAGATCTA-TTTTATGTCTATTTATTCTCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7574203 171 - 10077455 AGGC-AAAATTCCCCAACATTTAACTGATTCCTGGTAGCTTA--ATATCACTTTGAAAGATCTATATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTCATCCTCAAAAAGATCTA-TTTTATGTCTATTTATTCTCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121513947 171 - 127223203 AGGC-AAAATCCCCCAACATTTAACTGATTCCTGGTAGCTTA--ACATCACTTTGAAAGATCTATATATTTATAACCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTCATCCTCAAAAAGATCTA-TTTTATGTCTATTTATTCTCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 623434 171 + 1799296 AGGC-AAAATCCCCCAACATTTAACTGATTCCTGGTAGCTTA--TAATCACTTTGAAAGATCTATATATTTATAACCTTTTCTTCCCTCTATCATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTAATCCTCAAAAAGATCTA-TTTTATGTCTATTTATTCTCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5181274 171 - 6934359 AGGC-AAAATCCCCCAACGTTTAACTGATTCCTGGTAGCTTA--ACATCACTTTGAAAAATCTATATATTTATAATCTTTTCTTCCCTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTTTTACTGCATTTACTTCATCCTCAAAAAGATCTA-TTTTATGTCTATCTATTCTCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056748 172 + 128169293 AGGCAAAAATCCCCGAACATTTAACTGATTCCTGATAGCTTA--ATATCATTTTGGAAAATCTATATATTTACAGCCTTTTCTTTCTTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTATTACTCCATTTACCTCATCCTTGAAAAGATCTA-TTTTTTGTCCCTTTATTTTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641777 171 + 18371965 AGAC-AAAATCCCCCAACATTTAACTGATTCCTGATAGCTTA--ATATCATTTTGGAAAATCTATATATTTACAACCTTTTCTTTCTTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTATTACTCCATTTACTTCATCCTCAAAAAGATCTA-TTTTTTGTCCCTTTATTTTCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176663 171 - 3566421 AGAC-AAAATACCCCAACATTTAACTGATTCCGGATAGCTTA--ATATCATTTTGGAAAATCTATATATTTACAGCCTTTTCTTTCTTCTATGATTTCTGGTCAGCTTGGG-TTTGTTTATTACTCCATTTACTTCATCCTCGAAAAGATCTATTTTTTTGTCCCTTTATTTTCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7376092 174 + 9267652 AGAC-AAAATCCCCCAACATTTAACTGATTCCTGATAGCTTAATATATCATTTTGGAAAATCTATATATTTACAGCCTTTTCTTTCTTCTATGATTTCTGGTCAGCTTGGGTTTTGTTTGTTACTCTAGTTACTTCATCCTCAAAAAGATCTATTTTTTCGTCCCTTTATTTTCA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1589339 164 - 14340318 AAAA-AAAATCCCCAA--ATCTACTTGATATTTTATAGTTTA--AGATTCCCTTTTAAA--TTATATCTTTTTGACTTTGTTTCCATGTTATAATTTCTGGTCAGCTTAGATTTTGTTTT---CTCCACTTACTTGATCCTAGAAAATAGGTG-TTTTATGTTTATTTCTTCTCA i otoGar3.GL873564 I 968 I 2362 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=3945929.000000 s hg38.chr14_KI270725v1_random 111929 366 + 172810 TTTATGGACC---Ttgagaaaagaaaataactttcatatgagaaatgcaagtcctttgaaataatcaggcccagagagatattcaaatgagac-agcagttctgtcctgctcctctttgagctgtgtgttcatctaggctgc-cgctgttaccacagtagctataaattaaccaataaagccacaccagacactataatccacacccaataatagtgtaacagtgtatagccaatcactaataaa-tgttatttccataagccaatgagaatttgtgacaaacctctttgcatcatcccacttctggaccc----ttttttgcctttaagaaactgcttgttgcaaagctccaaagggagttcatatccaaggata s panTro5.chr1 126673351 338 + 228573443 TTTATGGACA---Ttgagaaaagaaaataactttcatgtgagaaatgcaagtccttttaaataatcaggtccagagagatattcaaatgagac-agcaattctgtcctgctcctctttgagctgtgtgttcatctaggctgcttgctgttgccacagtagctataaattaaccaataaccccacaccagacactataatccacacccaa-----------------------------taataaa-tgttaattccataagccaatgagaatttgtgacaaacctctttgcatcatccctcttctggaccc----ttttttgcctttaacaaactgcttgttacaaagctccaaagggtgttcatatccaaggata i panTro5.chr1 C 0 C 0 s panPan2.chr7 74672639 368 + 162613886 TTTATTGAAA---Ttgagaaaagaaaataactgtcatgtgagaaacgcaagtcctttgaaataatcaggcccagagagttattcaaatgagac-agcagttctgtcctgctcctcgttgagctgtgtgttcatctaggctgcttgctgttgccacagtagctataaattaaccaataacgccacaccagacactacaatccacacccaataatagtgtaacagtgtatagccagtcactaataaattgttatttccataagccaatgagaatttgtgacaaacctctttgcatcatcccacttctggaccc----atttttgcctttaagaaactgcttgttgcaaagctccaaatggagttcatatccaaggata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 92143 367 + 126596 TTTATGGACA---Ttgagaaaagaaaataactttcatgtgagaaatgcaagtccttttaaataatcaggcccagagagatattcaaatgagac-agcagttctgtcctgctcctctttgagctgtgtgttcatctaggctgcttgctgttgccacagtagctataaattaaccaataacgccacaccagacactataatccacacccaataatagtgtaacagtgtatagccagtcactaataca-tgttatttccataagccaatgagaatttgtgacaaacctctttgcatcatcccacttctggaccc----ttttttgcctttaagaaactgcttgttgcaaagctccaaagggagttcatatccaaggata i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5683388 367 + 72422247 TTTATTGACA---Ttgagaaaagaaaataactttcatatgagaaatgcaagtccttttaaataatcaggcccagagagatattcaaatgagac-agcagttctgtcttgctcctctttgagctgtgtgttcatctaggctgcttgctgttccaacagtagctataaattaaccaataatgccacaccagacactataatccacacccaataatagtgtaacagtgtatagccagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaacctgtttgcatcatcccacttcttgtccc----ttttttgcctttaagaaactgcttgttgcaaagctccaaatggagttcatatccaaggata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44121427 366 - 99891981 TTTATTGACA---Ctgagaaaagaaagtaacttttatgtgagaaatgcaagtccttttaaacaatcaggcccagagagatattaaaatgagacaagcagttgtgccctactcctctttgagctgtgtgttcatccaggctgcttgctgttgccatagtagctataaattaaccaacaatgccacaccagacactataatcctcacccaataacagcttaacagtgtatagccagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaacctctttgtatcatcccac--cttgtccc----ttttttgcctttaagaaactgcttgttgcaaagctccaaatggagttcatatccaaggata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52348159 367 + 185818997 TTTATTGACA---Ttgagaaaataaaataacttctatgtgagaaatgctagtccttttaaataatcaggcccagagagatattaaaatgagac-agcagtcgtgcccaactcctctttgagctgtgtattcatctaggctgcttgctgttgccacagtagctataaattaatcaataatgccacaccagacaccataatccacacccaataacagcataacagtgtatagccagtcactaatcaa-tgttatttccatgagccaatgagaatttgtgacaaacctctttgcatcatcccactccttgtccc----ttttcagcctttaagaaactgcttgttgcaaaactccaaatggagttaatatccaagaata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124993857 367 - 192294377 TTTATTGACA---Ttgagaaaataaaataacttctatgtgagaaatgctagtccttttaaataatcaggcccagagagatactaaaatgagac-agcagtcgtgcccaactcctctttgagctgtgtattcatctaggctgcttgctgttgccacagtagctataaattaatcaataatgccacaccagacaccataatccacacccaacaacagcataacagtgtatagccagtcactaatcaa-tgttatttccatgagccaatgagaatttgtgacaaacctctttgcatcatcccactccttgtccc----ttttcagcctttaagaaactgcttgttgcaaaactccaaatggagttcatatccaagaata i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 341077 367 - 3123512 TTTATTGACA---Ttgagaaaataaaataacttctatgtgagaaatgctagtccttttaaataatcaggcccagagagatattaaaatgagac-agcagtcgtgcccaactcctctttgagctgtgtattcatctaggctgcttgctgttgccacagtagctataaattaatcaataatgccacaccagacaccataatccacacccaataacagcataacagtgtatagccagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaacctctttgcatcatcccactccttgtccc----ttttcagcctttaagaaactgcttgttgcaaaactccaaatggagttcatatccaagaata i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7574374 367 - 10077455 TTTATTGACA---Ttgagaaaataaaataacttttatgtgagaaatgctagtccttttaaataatcaggcccagagagatattaaaatgagac-agcagtcgtgcccgactcctctttgagctgtgtattcatctaggctgcttgctgttgccacagtagctataaattaatcaataatgccacaccagacaccataatccacacccaataatagcataacagtgtatagccagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaacctctttgcatcatcccactccttgtccc----tttttagcctttaagaaactgcttgttgcaaaactccaaatggagttcatatccaagaata i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121514118 367 - 127223203 TTTATTGACA---Ttgagaaaataaaatatcttttatgtgagaaatgcaagtccttttaaataatcaggcccagagagatattaaaatgagac-agcagtcgtgcctgactcctctttgagctgtgtattcatctaggctgcttgaggttgccacagtagctataaattaatcaataatgccaagccagacaccataatccacacccaataatagcataacagtgtatagccagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaacctctttgcatcatcccactccttgtccc----tttttagcctttaagaaattgcttgttgcaaaacgccaaatggagttcatatccaagaata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 623605 367 + 1799296 TTTATTGACA---Ttgagaaaataaaataacttttatgtgagaaatgctagtccttttaaataatcaggcccagagagatattaaaatgagac-agcagtcgtgcccaactcctctttgagctgtgtattcatctaggctgcttgctgttgccacagtagctataaattaatcaataatgccacaccagacaccataatccacacccaataatagcataacagtgtatagccagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaatctctttgcatcatcccactccttgtccc----tttttagcctttaagaaactgcttgttgcaaaactccaaatggagttcatatccaagaata i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5181445 367 - 6934359 TTTACTGACA---Atgagaaaataaaataacttttatgtgagaaatgcaagtccttttaaataatcaggcccagagagatagtaaaatgagac-agcagtcgtgcccgactcctctttgagctgtgtattcatctaggctgcttgctgttgccacagtagtcataaattaatcaataatgccacgccagacaccataatccacacccaataatagcataacagtgtatagccagtcactaatcaa-tgttatttccataagccagtgagaatttgtgacaaacctctttgcatcatcccactccttgtccc----tttttagcctttaagaaactgcttgttgcaaaactccaaatggagttcatatccaagaata i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20056920 367 + 128169293 TTTATTGACA---Ctgagaaaagaaaataacctttatgtgagaaatgcaagtcctttcaaataatcaggcccagagtgatattaaaatgagac-agaagtcaggtcccactcctctttgagctgtgtattcatccaggctgcttgctgttgccacagtagctataaattaactaataatgccacaccagacactataatccacaccctataatagcttaacagtgtatagtcagtcactaatcaa-tgttatttccataagccaatgagaatttgtgacaaacatctttgcatcaccccactccttgtctc----ctttttgcctttaagaacctgctttcagtaaagctgcaaatggagttcatatccaaggata i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17641948 368 + 18371965 TTTATTGACA---Ttgagaaaagaaaataacttttatgtgagaaattcaagtccttttaaataatcaggcctagagtgacattaaaatgagac-cgaagtcaggtcctactcctctttgagctgtgtattcatccaggctgcttgctgttgccatagtagctataagttaaccaataatgccacaccagacactataatccatatcctataatagcttgacagtgtatagccagtcgctaatcaa-tgctatttccgtaagccaatgagaatttctgacaaa---ctttgcattaccccactccttgtcccttttttttttgcttttaagaacctccttgtagcaaagctgcaaacagagttcatatccaagggta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2176834 367 - 3566421 TTTATTGACATGTCtgaggaaagaaaataaca--tatgtgagaaatgcaagtccttttaaataatcaggcccagagtgatattaaaatgagac-agacgtcaggtcctactcctctttgagctgtgtattcatccaggttgcttgctgttgccacagtagctataaattaaccaataatgtcaccccagacactataatccataccctat-gtagcttaacagtgtatagccagtcactaatcaa-tgctatttccataagccaatgagaatttctgacaaacctctttgcatcaccccactccttgtccc----ttgtttgcctttaagagcctgcttgtagccaagctgcaaacggagttcatatccaaggata i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7376266 367 + 9267652 TTTATTGACA---Ttgaaaaaagaaaataacttttatgtgagaaatgcaagtccttttaaataatcaggcccagagtgatattaaaatgagac-agaagtcaggtcctgctcctctttgagctgcgtattcatccaggctgcttgctgttgccacagtagctataaattaaccaataatgccacaccagacactataatccacaccctataatagcttaacagtgtatagccagtcactaatcaa-tgttatttccgtaagccaatgagaatttctgacaaaccactttgcatcaccccactccttgtccc----ttttttgcctttaagaacctgcttgtagcaaagctgcaaatggagttcatatccaaggata i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1589503 2362 - 14340318 I a score=817701.000000 s hg38.chr14_KI270725v1_random 112295 71 + 172810 cttgggtctgtttcttccaggcag-ctgtcctca--ttgtggatcaagtaaactctttgaattacgttttgtgc s panTro5.chr1 126673689 71 + 228573443 cttgggtctgtttcttccaggcag-ctgtcctca--ttgtggctcaagtaaactctttgaattacgttttgtgc i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673007 71 + 162613886 cttgggtttgtttcttccaggcag-ctgtcccca--ttttggctcaggtaaactctttgaattacgttttgtgc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 92510 71 + 126596 cttgggtctgtttcttccaggcag-ctgtcctca--ttgtggctcaagtaaactctttgaattacgttttgtgc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5683755 71 + 72422247 cttgggtcggtttcttccaggcag-ctgtcctca--ttttggctcaagtaaactctttgaattacgttttgtgc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44121793 71 - 99891981 cttgggtctgtttcttccaggcag-ctgtcctca--ttttggctcaagtaaactctttgaattatgttttgtgc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52348526 71 + 185818997 cttgggtctgtttcttccaggcaa-ctgtcctta--ttttggctcaggtaaactctttgaattacgttttgtgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124994224 71 - 192294377 cttgggtctgtttcttccaggcaa-ctgtcctta--ttttggctcaggtaaactcttcgaattacgttttgtgc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 341444 71 - 3123512 cttgggtctgtttcttccaggcaa-ctgtcctta--ttttggctcaggtaaactctttgaattacgttttgtgc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7574741 71 - 10077455 cttgggtctgtttcttccaggcaa-ctgtcctta--ttttggctcaagtaaactctttgaattacgttttgtgc i cerAty1.NW_012000909v1 C 0 I 72 s chlSab2.chr21 121514485 71 - 127223203 cttgggtctgtttcttccaggcag-ctgtcctta--ttttggctcaagtaaactctttgaattacgttttgtgc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 623972 71 + 1799296 cttgggtctgtttcttccaggcaa-ctgccctta--ttttggctcaagtaaactctttgaattacgttttgtgc i manLeu1.NW_012105809v1 C 0 I 6408 s colAng1.NW_012115910v1 5181812 71 - 6934359 cttgggtctgtttcttccaggcag-ctgagctta--ttttggctcaagtaaactctttGAATTACTTTTTGTGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20057287 72 + 128169293 cttgggtctgtttcttacaagcagcctgtcctca--ttttggctcaagtaaactctttgaattatgttttgtgc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17642316 72 + 18371965 cttgggtctgtttcttacaggcagcctgtcctca--ttttggctcaagtaaactctttgaattatgttttgtgc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2177201 72 - 3566421 cctgggtctgtttcttacaggcagcctgtcctca--ttttggctcacgtaaactctttgaattatgttttgtgc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7376633 72 + 9267652 cttgggtctgtttcttacaggcagcccgtcctca--ttttggctcaagtaaactctttgaattacattttgtgc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1591865 66 - 14340318 ctgaagcttgtgacttctgaatgg-ccatttctagcttttaactcgaataaactcattaaaccagga------- i otoGar3.GL873564 I 2362 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=320296.000000 s hg38.chr14_KI270725v1_random 112366 28 + 172810 ttcaGCCCCTTCCACTTAGATTAACA---------------AC s panTro5.chr1 126673760 28 + 228573443 ttcagccccttccacttagattaaca---------------AC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673078 28 + 162613886 ttcaGCCTCTTCCACTTAGATTAACA---------------AC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 92581 27 + 126596 ttcaGCC-CTTCCACTTAGATTAACA---------------AC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5683826 28 + 72422247 ttcaGCCTCTTCCACTTAGATTAACA---------------AC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44121864 28 - 99891981 ttcaGCCTCTTCCACTTGGATTAACA---------------AC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52348597 28 + 185818997 ttcaGCCTCTTCCACTTAGATTAACA---------------AC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124994295 28 - 192294377 ttcaGCCTCTTCCACTTAGATTAACA---------------AC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 341515 28 - 3123512 ttcaGCCTCTTCCACTTAGATTAACA---------------AC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7574884 28 - 10077455 TTCAGCCTCTTCCACTTAGATTAACA---------------AC i cerAty1.NW_012000909v1 I 72 C 0 s chlSab2.chr21 121514556 28 - 127223203 ttcaGCCTCTTCCACTTAGATTAACA---------------AC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 630451 28 + 1799296 TTCAGCCTCTTCCACTTAGATTAACA---------------AC i manLeu1.NW_012105809v1 I 6408 C 0 s colAng1.NW_012115910v1 5181883 28 - 6934359 TTCAGCCTCTTCCACTTAGATTAACA---------------AC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20057359 28 + 128169293 ttaagcctcttccacttagaccaaca---------------AC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17642388 28 + 18371965 ttcaGCCTCTTCCACTTAGACCAACA---------------AC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2177273 28 - 3566421 ttcaGCCTCTTCCACTTAGACCAACA---------------AC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7376705 28 + 9267652 ttcaGTCTCTTCCACTTAGACCAACA---------------AC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1591931 43 - 14340318 ctctgatcctttcaattattttagggtgaTGTCATGTGTGCAT i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 248554 4121 - 1446996 I e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=5865302.000000 s hg38.chr14_KI270725v1_random 112394 536 + 172810 ATGATTTTGTGTCACCATGTACAGCAAT-TAAAATGTTTACACTTTT-CCTCTCCA-GGGCACTGATGTGTTTTCCTGAGCACTTGGAATAGCT-ACATAGTGTTTACTGTCTAGATTATggtttctcaaccttggtgctacttacctttaggaccagaggattctttgttgtgggaggctgccct-a-acaatgctaggtgtttcg-------tttgacctcta-------aattt---c-----------acacctccaccagtcttgacatccccacaataac-cctagacattgacaaatgtctcctgg--ggaaa---actctccaccagttgacagccaAAGTTCTGGAAATATTGGAATTGTCAATTGAGATTTTATGTTATCCAAAACaaatatttttctttg-tttttaaacatctac------ttccatctacttatctacttatttt-tacttttatttgtaacttaattccatcaaggaga-----gagagtgcattttctgttatgctaaatttttgaagaatgtat--tga---ttttttctgacctgatatatggatgatat-gtagatattacatgtTT-- s panTro5.chr1 126673788 534 + 228573443 ATGGATTTGTGTCACCATGTACAGCAAT-TAAAGTGTTTACACTTTT-CCCCTCGA-GGGCAATGATGTGTTTTCCTGAGCACTTGGAATAGCT-ACGTAGTGTTTCCTGTCTAGATTATggtttctgatccttggtgctacttacctttaggaccagaggattctttgttgtgggaggctgccct-a-gcaatgctaggtgtttcg-------tttgacctcta-------aattt---c-----------acaactccaccagtcttgacatccccacaataac-cctagacattgacaaatgtctcctgg--ggaaa---a--ctccaccagttgaCAGGCAAAGTTCTGGAAATATTGGAATTGTCAATTGAGATTTTATGTTATCTAAAACAAATATTTTTCTTTG-TTTTTAAACATCTGC------TTCCATCTACTTATCTACTTAGTTT-TACTTTTATTTGTAACTTAATTCTATCAAGGAGA-----GAGAGTGCATCTTTTGTTATGCTAAATTTTTGAAGAATGTAT--TGA---TTTTTTATGACCTGATATATGGATGATAC-GTAGATATTACATGTTT-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673106 536 + 162613886 ATGCATTTGTGTCACCATGTACAGCAAT-TAAAGTGTTTACACTTTT-CCCCTCGA-GGGCACTGATGTGTTTTCCTGAGCACTTGGAATAGTT-ACATAGTGTTTACTTTCTATATTATggtttctcaaccttggtg-tacttacctttaggaccagaggattctttgttgtgggaggctgccctaa-gcaatgctaggtgattcg-------tttgacctcta-------aattt---c-----------acacctccaccagtcttgacatccccacaataat-cctagacattgacaaatgtctcctgg--ggaaa---actctccactggttgatagccaAAGTTCTTGTAATATTGGAATTGTCAATTGAGTTTTTATGTTATCCAAAGCAAATATTTTTCTTTG-TTTTTAAACATCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAGA-----GAGAGTGCATTTTCTGTTATGCTAAATTTTTGAAGAATGTAT--TGA---TTTTTTATGACCTGATATATGGATGATAT-GTAGATATTACATGTTA-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 92608 533 + 126596 ATGGATTTGTGTCACCATGTACAGCAAT-TAAAATGTTTACACTTTT-CCCCTCGA-GGGCACTGATGTGTTTTCCTGAGCAC-TGGAATAGCT-ACGTAGTGTTTCCTGTCTAGATTATggtttctcaaccttggtgctacttacctttaggaccagaggattctttgttgtgggaggctgccct-a-gcaatgctaggtgtttcg-------tttgacctcta-------aattt---c-----------acacctccaccagtcttgacat-cccacaataac-cctagacattgacaaatgtctcctgg--ggaaa---actctccaccagttgaCAGGCAAAGTTCTGGAAATATTGGAATTGTCAATTGAGATTTTATGTTATCCAAAACAAATATTTTTCTTTG-TTTTTAAACATCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAGA-----GAGAGTGCATTTTCTGTTATGCTAAATTTTTGAAGAATGTAT--TGA----TTTTTATGACCTGATATATGGATGATAT-GTAGATATTACATGTTT-- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5683854 536 + 72422247 ATGGATTTGTGTCACCATGTACAGCAAT-TAAAATGTTTATGCTTTT-CCCCTCGA-GGGCATTGATGTGTTTTCCTGAGCACTTGGAATAGCT-ACATAGTGTTTACTTTCTAGATTATggtttctaaaccttggtgctacttacctttaggaccagaggattctttgttgtgggaggctgccct-a-gcaatgctaggtgttttg-------tttgacctcta-------aattt---c-----------actactccaccagtcttgacatccccacaataac-cctagacattgacaaatgtcttctgg--ggaaa---actctccaccagtagacagccaACGTTCTTGAAATATTGGAATTGTCAATTGAATTTTTATGTTATCCAAAACaaatatttttctttg-tttttaaacatctac------ttccatctacttatctacttatttt-cacttttatttgtaacttaattccatcaaggaga-----gagagtgcattttctgttatactaaatttttgaagaatgtat--tga---ttttttatgacctgatatatgggtgatat-gtagatattacatgtTT-- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44121892 514 - 99891981 AGGGATTTGCATCACCATGTACAGCAAT-TAAAATGTTTACACTTTT-CCCCTTGA-GGGCATTGATGTGTTTTCCTGAGCACTTGGAATAGCT-ACATGGTGTTTACTTCCTAGATTATggtttctcaaccttggtactatttacctttaggaccagaagattctttgttgtgggaggctgccct-a-gcaatgctagaagtttca-------tttgacctcta-------aattt---c-----------acacccccaccagtcttgacatccccacaataac-cccagacattgccaaatgtctcctgg--ggaaa---aatctccaccagttgacagccaAAGTTCTTGAAATATTGGAATTGTCAGTTGAGTTTTTATGTTATTCACAACAAATATTTTTCTTTG-TTTTTAAACATCTAC------TTCCATCTACTTATCTACTTATT-----------------------TTCCATCAAGGATA-----GAGAGTGCATTTTCTGTTATGCTGAATTTTTCAAGAATGTAT--TGA---TTTTTTATAATCTGTTGTATGGATGATAT-GTAGATATTACCTGTTT-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52348625 531 + 185818997 ATGGATTTGTGTCACCATGTACCGCAAT-TAAAATGTTTACACTTTT-CCCCTCAA-GGGCATTGATGTGTTTTCCTGAGCACTTCGAGTAGCT-ACATTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacctttagaaccagaggattatttgttgtgggaggctgccct-a-gcaatgctagatgtttca-------tttgacctcca-------aattt---c-----------acacgcccaccagtcttgacattcccacagtaac-tctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGAAATATTGGAATTGTCAATTGAGTTTTTATGTTATCAAAAACAAATATTTTTCTTTG-TTTTAAAACTTCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAT---------AGTGCATTTTCTATTATGCTAATTTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAT-GTAGGTATTACATGTTT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124994323 531 - 192294377 ATGGATTTGTGTCACCATGTACCGCAAT-TAAAATGTTTACACTTTT-CCCCTCAA-GGGCATTGATGTGTTTTCCTGAGCACTTCGAGTAGCT-ACATTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacctttagaaccagaggattatttgttgtgggaggctgccct-a-gcaatgctagatgtttca-------tttgacctcca-------aattt---c-----------acacgcccaccagtcttgacattcccacagtaac-tctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGAAATATTGGAATTGTCAATTGAGTTTTTATGTTATCAAAAACAAATATTTTTCTTTG-TTTTAAAACTTCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAT---------AGTGCATTTTCTATTATGCTAATTTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAT-GTAGGTATTACATGTTT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 341543 531 - 3123512 ATGGATTTGTGTCACCATGTACCGCAAT-TAAAATGTTTACACTTTT-CCCCTCAA-GGGCATTGATGTGTTTTCCTGAGCACTTCGAGTAGCT-ACATTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacctttagaaccagaggattatttgttgtgggaggctgccct-a-gcaatgctagatgtttca-------tttgacctcca-------aattt---c-----------acacgcccaccagtcttgacattcccacagtaac-tctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGAAATATTGGAATTGTCAATTGAGTTTTTATGTTATCAAAAACAAATATTTTTCTTTG-TTTTAAAACTTCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAT---------AGTGCATTTTCTATTATGCTAATTTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAT-GTAGGTATTACATGTTT-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7574912 531 - 10077455 ATGGATTTGTGTCACCATGTACCGCAAT-TAAAATGTTTACACTTTT-CCCCTCAA-GGGCATTGATATGTTTTCCTGAGCACTTCGAGTAGCT-ACATTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacctttagaaccagaggattatttgttgtgggaagctgccct-a-gcaatgctagatgtttca-------tttgacctcca-------aattt---c-----------acacgcccaccagtcttgacattcccacagtaac-tctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGATATATTGGAATTGTCAATTGAGTTTTTATGTTATCAAAAACAAATATTTTTCTTTG-TTTTAAAACTTCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTGATTCCATCAAGGAT---------AGTGCATTTTCTATTATGCTAAATTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAC-GTAGATATTACATGTTT-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121514584 532 - 127223203 ATGGATTTGTGTTACCATGTACAGCAAT-TAAAATGTTTACACTTTT-CCCCTCAA-GGGCATTGATGTGTTTTCCTGAGCACTTCGAGTAGCT-ACATTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacctttaggaccacaggattatttgttgtgggaggctgccct-a-gcaatgctagatgtttca-------tttgacctcca-------aattt---c-----------acatgctcaccagtcttgacatccccacaataacttctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGAAATATTGGAATTGTCAATTAAGTTTTTATGTTATCAAAAACAAATATTTTTCTTTG-TTTTAAAACTCCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTCTATTTGTAACTTGATTCCATCAAGGAT---------AGTGCATTTTCTATTATGCTAAATTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAC-GTAGACATTACATATTT-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 630479 531 + 1799296 ATGGATTTGTGTCACCATGTACCGCAAT-TAAAATGTTTACACTTTT-CCCCTCAA-GGGCATTGATGTGTTTTGCTGAGCACTTCGAGTAGCT-ACCTTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacctttagaaccagaggattatttgttgtgggaagctgccct-a-gcaatgctagatggttca-------tttgacctcca-------aattt---c-----------acacgcccaccagtcttgacattcccacagtaac-tctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGAAATATTGGAATTGTCAATTGAGTTTTTATGTTATCAAAAACAAATATTTTTCTTTG-TTTTAAAACTTCTAC------TTCCATGTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAT---------AGTGCATTTTCTATTATGCTAAATTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAT-GTAGGTATTACATGTTT-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5181911 531 - 6934359 ATGGATTTGTGTCACCATGTACAGCAAT-TAAAATGTTTACAATTTT-CCCCTCAA-GGGCATTGATGTGTTTTCCTGAGCACTTCGAGTAGCT-ACATTGTGTTTACTTTCTAGAATATggtttctcaaccttggtgctatttacttttagaaccagaggattatttgttgtgggaggctgccct-a-gcaatgctagatgtttca-------tttgacctcca-------aattt---c-----------atacgcccaccagtcttgacatccccacaataac-tctagacattgccaaatgtctcctgg--ggaaa---aatttccaccagttgagagccCAAGTTCTTGAAATATTGGAATTGTCAATTGAGTTTTTATGTTATCACAAACAAATATTTTTCTTTG-TTTTAAAACTTCTAC------TTCCATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTAATTCCATCAAGGAT---------AGTGCATTTTCTGTTATGTTAAATTTTTCAAGAATGTTT--TGA----TTTTTATGACCTAATATATGGATGATAT-GTAGATATTACATGTTT-- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20057387 535 + 128169293 ATGGATTTTTGGCACTATGCACAGCAAT-TAAAATGTTTACAATTTT-TCCCTCAA-GGGCATCGATGTGTTTTCCTGAGCACTTTGAATGCCT-ACAGGGTTTTTATTTTCTAGATTATggtttttcaaccttggagctatttacctttaggaccagaggattcttcgtggtgggaagttgccct-g-acaatgttagaagtttcg-------tttgaccccta-------aattt---c-----------acacccccaccattctcgacatccccaccataac-tctagacattgccaaatgtcacctggg-ggaag---aatctccaccagttgagagccaAAGTGCTTGAAATATTGGAATTATCAATTGAGTATTTATGTTATCCAAAACAAATATTTTTCTTTA--TTTTAAACATCTAC------TTCAATCTACTTCTGTACTTATTTT-TACTTTTATTTGTAACTTCATTGCATCAAGGATA-----GAAAGTGCATTTTCTGTCATGCTAAATTTTTCAAGAATGTAT--TG----TTTTTTATGAGCTAATATATGGGTAATAT-GTATATATTACATGTGT-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17642416 534 + 18371965 ATGGATTTGTGTCTCCATGAACAACAAT-TAAAATGTTTACACTTTT-CCCCTCGA-GGGCATGGATGTGTTTTCCTGAGTACTTTGAATGCCT-ACACGGTTTTTCTTTTCCAGATTATggttttaaaaccttggtgctgtttacctttaggaccagaggattctttgtggtgggaagttgccct-g-gtaatgttagaagttttg-------tttgacctcta-------aattt---c-----------acactcctaccagtcttgacatccccaccataac-tctagacattgccaaatgtctcctgga-ggaag---aatctccaccagttgagagccaACGTGCTTGAAATATTGGAATTGTCAATTGAGCATTTATGTTATCCAAAACAAATATTTTTCTTTA-TTTTTAAACATCTAC------TTCAATCTATTTATCTACTTATCTT-TACTTTTATTTGTAACTTCATTGCATCAAGGATA-----GAAAGTGCATTTTCTGTCATGCTAAATTTTTCAAGAATGTAT--------TTTTTTATGAGCTAATATATGGGTAGTAT-GTATCTATTACATGTGT-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2177301 534 - 3566421 ATGGATTTGTGTCACCATGCACAGCAAT-TAAAATGTTTACACTTTT-CCCCTCCA-GGGCATCGATGTGTTTTTCTGAGCGCTTTGAACACCT-ACAAGGTTTTTATTTTCTAGGTTATggtttttgaaccttggtgctattaacctttaggaccagaggattctttgtggtgggaagttgccct-g-gcaatgttagaagttttg-------tttgacctcta-------aattt---c-----------acaacctcaccagtcttgacatccccaccataac-tctagacattgccaaatgtctcctggg-ggaag---aatctccaccagttcagagccaAAGTGCTTGAAATATTGGAATTGTCAATTGAGTATTTATGTTATCCAAAACAAATA-TTTTCTTTA-TTTTTAAACATCTAC------TTCAATCTACTTATCTACTTATTTT-TACTTTTATTTGTAACTTCATTGCATCAAGGATA-----GAAAATGCATTTTCTGTCATGCTAGATTTTTCAAGAATGTAT--T-----TTTTTAATGTGCTAATATATGGGTAATAC-GTATATATTACATGTGT-- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7376733 527 + 9267652 ATGGATTTGTGTCGCCATGCACAGCAAG-TAAAATGTTTACTCTTTT-CCCCTCGA-GGGTATCTATGTGTTTTCCTGAGCACTTGGAATGCCT-TCATAGTTTTTATTTTCTAGATTATgatttttcaaccttggtgctatttacctttaggaccagaggattctttgtggtgggaagtcaccct-g-gcaacgttagaagtttcg-------tttgacctcta-------aattt---c-----------acacccccaccagtcttgacatccccaccataac-tctagacattgccaaatgtctcctggg-ggaag---aatctccaccagttgagagccaAAGTGCTTGAAATATTGGAATTGTCAATTGAGTATTTATGTTATCCAAAGCAAATATTTTTCTTTG-TTTTTAAACATATAC----------------TTATCTACTTATTTT-TACTTTTATTTGTAACTTCATTGCTTCAAGGATA-----GAAAGTGCATTTTCTGTTATGCTAAATTTTTCAAGAGTGTAT--TGT---TTTTTTATGAGCTAATATATGGGTAATAT-GTATATATTACATGTAT-- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1591974 491 - 14340318 ATGGGTTTATGTAACCACAAACAGCAAT-TAAAAT-------TTTTC-CCCCAC-GTGCGTGTTGATGTGTTTTCCCAAGAATTTCAAACAGCT-GAACAGTTTTTATTTTGTAGATTACAGTTTCt--------------------------------------------gtgggaggttttcct-g-cacatgctggctgttgag-------cctgacctctaccctctggatttgggc-----------acccatgcccaagtcttgacaaccccagagtatc-tctacactttgcaaaatgtcttctgc--ggata---aa-atccaccatttgagagtcacAAATTTTGATGTTTTTTAATTATAGAGAGAGGTTTTATGTTATCCAAAATAAATTTCCTG-------TTTTCAACATGGAC------TTCTATCCACTTATCCACTTATTTTCTACTTCCATTTATAAGTTCATGGCACTAAGCACA-----GAGAATGTATTTTCAGCTATATTAGATTTTTCAAGAGCATCTGATGT---TTCCTTATGAAC-GATCTGTGGATAATGTGGCAGACATTCCATGTGC-- i otoGar3.GL873564 C 0 I 580 s dasNov3.JH578441 252675 579 - 1446996 ATGAATTTGTATGACTTTACATAGTAATACAAAATGCTTATACTCTTATTTCTACT-GAACATTGCACTTTTTTCCTTAACATTTATTACAGCTAAAACTATTTTAATTTTCTATTTcagggtttcttaatttcagcaccattgatatagtgggccagataattctttgtttttcgggggtgccct-atgcaatgtagcacattcagccatatccttgacctcta--ctcttgattc---cagtagcatccaacccattcacta-ttttgacaacccta-aatatc-ttcacacattgccacatgccccgggggtgggaacacaattaccatcaactgaaaacAGCATCTCTTAATGT-TCAGGATTGCACATTGA-TTCTTATCTTATACAAAGaaaaaaaaattatttattttttaaaCATCTAAGAGCTATTTTTTTTTCTTCCCTACTTCTGCT----ATTAATCCCCAAGTTTATTGACTCAAGAACAGGACTGAGAGTATATTTTCTGTTACATTAAAGTTTTTAAAAAAGTGT--AAATTTTTCTTTCTGAGTTAATAGGTGGGTATTTTTATAGATATTACAGATGCTT i dasNov3.JH578441 I 4121 C 0 e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=333253.000000 s hg38.chr14_KI270725v1_random 112930 29 + 172810 GTA--------TTATCAAATTTCAGGGCG--------------ATAAT-----AAA s panTro5.chr1 126674322 29 + 228573443 GTA--------TTATCAAATTTCAGGGCG--------------ATAAT-----AAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673642 29 + 162613886 GTA--------TTATCAAATTTCAGGGCG--------------ATAAT-----AAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93141 29 + 126596 GTA--------TTATCAAATTTCAGGGTG--------------ATAAT-----AAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684390 29 + 72422247 GTA--------TTATCAAATTTCAGGGCG--------------ataat-----aaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122406 29 - 99891981 GTA--------TTACCAAATTTCAGGGCA--------------ATAAT-----AAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349156 29 + 185818997 GTA--------TTATCAAATTTCAGGGCA--------------ATAAT-----AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124994854 29 - 192294377 GTA--------TTATCAAATTTCAGGGCA--------------ATAAT-----AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342074 29 - 3123512 GTA--------TTATCAAATTTCAGGGCA--------------ATAAT-----AAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7575443 24 - 10077455 GTA--------TTATCAAATTTCAGGGCA--------------AT----------A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515116 29 - 127223203 GTA--------TTATCAAATTTCAGGGCA--------------ATAAT-----AAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631010 29 + 1799296 GTA--------TTATCAAATTTCAGGACA--------------ATAAT-----AAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5182442 29 - 6934359 GTA--------TTATCAAATTTCAGGGCA--------------ATAAT-----AAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20057922 34 + 128169293 GTA--------TTGTCAAATTTCAGGGCA--------------ATAATAAAACAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17642950 29 + 18371965 GTA--------TTATCAAATTTCAGGGCG--------------ATAAT-----AAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2177835 34 - 3566421 GTA--------TTGTCAAATTTCAGGGCA--------------ATAATAAAATAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7377260 34 + 9267652 GTA--------TTGTCAAATTTCAGGGCA--------------ATAATAAAATAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1593045 29 - 14340318 GTA--------TTCTCAAATTTCAGAACa--------------attat-----aaa i otoGar3.GL873564 I 580 C 0 s dasNov3.JH578441 253254 51 - 1446996 ATAATTATTCCTTCTCAAATATCATGGGATTTTACATATGTACATAAT-----AAT i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4082200 1320 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=1377115.000000 s hg38.chr14_KI270725v1_random 112959 134 + 172810 ATAAA------TACTTATAATATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---CTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTG------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTCGATTTT---------GAAATGTT----ATGATCAAATAT--- s panTro5.chr1 126674351 134 + 228573443 ATAAA------TACTTATAATATTTATATTGTCACTGTATATTC-----------------------------------------------GTTATTTTCTTT---CTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------TAGGC--TATTTT-----------------------------CCAATTC--------------TAGGTTATCC------AGTAGATTCT---------GAAATGTT----ATGATTAAATAT--- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673671 134 + 162613886 ATAAA------TACTTATAATATTTATATTATCACTTTATATTA-----------------------------------------------GTTATTTTCTTT---CTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGGTTATCG------AGTAGATTTT---------GAAATGTT----AAGATTAAATAT--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93170 133 + 126596 ATAAA------TACTTATAATATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---CTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATA---- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684419 134 + 72422247 ataaa------tacttataatatttatattGTCACTCTATATTA-----------------------------------------------GTTATCTTCTTT---CTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GACATGTT----ATGATTAAATAT--- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122435 131 - 99891981 ATAAA------TACTT---CTATTTATATTGTCACTATATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGCAGATTTT---------GAAACGTT----ATGATTAAATAT--- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349185 134 + 185818997 ATAAA------TACTTCTACTATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATAT--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124994883 134 - 192294377 ATAAA------TACTTCTACTATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATAT--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342103 134 - 3123512 ATAAA------TACTTCTACTATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATAT--- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7575467 134 - 10077455 ATAAA------TACTTCTACTATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATAT--- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515145 134 - 127223203 ATAAA------TACTTCTACTATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATAT--- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631039 134 + 1799296 ATAAA------CACTTCTACTATTTATACTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAACTAT--- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5182471 134 - 6934359 ATGAA------TTCTTCTACTATTTATATTGTCACTGTATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGAGT----TTTTCAACCTA------------------------GAGGC--AATTTT-----------------------------TCAATTC--------------TAGGTTATCC------AGTAGATTTT---------GAAATGTT----ATGATTAAATAT--- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20057956 122 + 128169293 ATAAA------TACTTCTAATATTTATATTGTCACTACATATTA-----------------------------------------------GTTATTTTCTTT---TTTT--GCTA-----------------------------------------------------CAGGAAA----TTTTCGGCCTA------------------------TAGGC--TATTTT-----------------------------TCAATAC--------------TAGG------------------TTTT---------GAAATGTT----ATGATTAAATAT--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17642979 121 + 18371965 ATAAA------TACTTCTAATATTTATATTGTCACTACATATTA-----------------------------------------------GATATTTTCTTT---TTTC--ACTA-----------------------------------------------------CAGGACA----TTTTCAACCTA------------------------CAAGC--TATTTT-----------------------------TCAATTC--------------TAGG------------------TTTT---------GAAATGTT----ATGATTAAACA---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2177869 117 - 3566421 ATAAA------TACT-----TATTTATATTATCACTACATATTA-----------------------------------------------GTTATTTTCTTT---TTTT--GCTA-----------------------------------------------------CAGGAAA----TTTTCAACCTA------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGG------------------TTTT---------GAAATGTT----ATGATTAAATAT--- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7377294 122 + 9267652 ATAAA------TACTTCTAATATTTATATTGTCACGACATATTA-----------------------------------------------GTTATTTTCTTT---TTTC--GCTA-----------------------------------------------------CAGGAAA----TTTTCAACTTA------------------------TAGGC--TATTTT-----------------------------TCAATTC--------------TAGG------------------TTTT---------GAAATGTT----ATGATTAAATTT--- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1593074 129 - 14340318 atgaaataattaatttttgatatttataGTATTCCTATATGATT-----------------------------------------------AATATTTTCTCTTTATTTT--ACTA-----------------------------------------------------TAGGAAT----TTTCCAACCTA------------------------T--GC--TTGTTT-----------------------------TCATTTC--------------TGGG------------------TTAT---------TAGATGTT----ATGATGACATAT--- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4083520 134 + 55844845 ATAAA------TA-TTCTAATATTTACACGAT---TATATATTT-----------------------------------------------AACATTTTCTTT---TTTCTTACTA-----------------------------------------------------TAGCGAT----TTTCTAACCCA------------------------CAGCCTTTTTTTT-----------------------------TCAATTA--------------TAGGTTAACA------TGTAGGTTAT---------TAAATATT----ATGAGTAATCAT--- i canFam3.chr18 I 1320 I 193 s dasNov3.JH578441 253305 327 - 1446996 TTGCA------TACCATTATCAACTATATTATTCTCATGTTTTATATCTTAACATATTTATTGCCTGTGTGATTTTTGCTTTGTCCTTCTTGACATTTTTTTC---TTAC--CCTATATCCATGCAGCATTATGGATACATATTTCAATCAACTGAGAAATTTCTTTATTAGAAATTCAATTTTTAACCTGATAAAATGATTCTTTTGTTCCACTTAGAG--TATTTTAATTTTGCTTATCATTTTTTCTAATAATATCAATGCCACTATATATTTAGTAGTTTGCCCCTAATATATAGATTTTCCAACCCAAGGCATATTTTTAGTTATTACATGTTAT i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=405869.000000 s hg38.chr14_KI270725v1_random 113093 34 + 172810 CTACTTCTCAAGCATTCATCTTTGCAAATGAAAC s panTro5.chr1 126674485 34 + 228573443 CTACTTCTCAAGCATTCATCTTTGCAAATGAAAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673805 34 + 162613886 CTACTTCTCAAGCATTCATCTTTGCAAATGAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93303 34 + 126596 CTACTTCTCAAGCATTCATCTTTGCAAATGAAAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684553 34 + 72422247 CTACTTCTCAAGCATTCATGTTTGCAAATGAAAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122566 34 - 99891981 CTACTTCTCAAGCATTCGTCTTTGCAGATGAATC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349319 34 + 185818997 CTACTTCTCAAGTATTCATCTTAGCAAATGAATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995017 34 - 192294377 CTACTTCTCAAGTATTCATCTTAGCAAATGAATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342237 34 - 3123512 CTACTTCTCAAGCATTCATCTTAGCAAATGAATC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7575601 34 - 10077455 CTACTTCTCAAGCATTCATCTTAGCAAATGAATC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515279 34 - 127223203 CTACTTCTCAAGCATTCATCTTAGCAAATGAATC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631173 34 + 1799296 CTACTTCTCAAGCATTCATCTTAGCAAATGAATC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5182605 34 - 6934359 CTGCTTCTCAAACATTCATCTTTGCAAATGAATC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058078 34 + 128169293 CTACTTCTCAAGTGTTCATCTTTGCAAATGAATC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17643100 29 + 18371965 -----TCTCAAGTGTTCTTCTTTGCAAATGAATC i saiBol1.JH378145 C 0 I 195 s cebCap1.NW_016107540v1 2177986 34 - 3566421 CTACTTCCCAAGTGTTCATCTTTGCAAATGAATC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7377416 34 + 9267652 CTACTTCTCAAGTGTTCATCTTTGTAAATGAATC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1593203 32 - 14340318 TT--TATTCATATTTTCATATTTGCAAATGAATT i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 253632 34 - 1446996 CCACTTCTCATATTTTCATCCTTGTAAATTCATC i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=2983176.000000 s hg38.chr14_KI270725v1_random 113127 270 + 172810 AATCCCAAGCTCTTATAATGCACATCATATAAAGGGGAGATTAGTCAATATATGTTTCAGAAATAATTATGTAGTA-TTTGTAAG-AAATTGAAAATTTAGATCCTTAACTCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTCATTACATAATT---TAAAATGACACCAGAATACTAGTAAAAATGTAGATAA--GTTTATATAATCTATTTTAGCTGTAGGACTTTATTAGCATAAATTCAAATACAGGAACCAAAGTAAGATTGAGACCTAT s panTro5.chr1 126674519 271 + 228573443 AATCCCAAGCTCTTATAATGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATTATGTAATA-TTTATAAGAAAATTAAAAATTTAGATCCTTAACTCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGATTACATAATT---TAAAATGACGCCAGAATACTAGTAAAAATGTAGATAA--GTTTATATAATCTTTTTTAGCTGTAGGACTTTATTAGCATAAATTGAAATACAGGATCCAAAGTAAGATTGAGACCTAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74673839 271 + 162613886 AATCCCAAGCTCTTATACTGCACATCATATAAAGGGCAGATTAGTTAATATATGGTTCAGAAATAGTTATGTAACA-TCTATAAGAAAATTAAAAATTTAGATCCTTAACTCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGAATACTAGTAAAAATGTAGATAA--GTTTATATAATCCTTTTTAGCTGTAGGACTTTATTAGCATAAATTCAAATACAGGAGCCAAAGTAAGATTGAGACCTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93337 265 + 126596 AATCCCAAGCTCTTATAATGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATTATGTAATA-TTTATAAGAAAATTAAAAATTTAGATCCTTAA-TCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTCATTACATAA-T---TAAAATGACA-CAGAATA-TAGTAAAAATGTAGATAA---TTTATATAATCT-TTTTAGCTGTAGGACTTTATTAGCATAAATTCAAATACAGGAACCAAAGTAAGATTGAGACCTAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684587 271 + 72422247 AATCCCAAGCTCTTATAATGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGaaataattatgtaata-tttataagaaaattaaaaatttaGATCCTTAACTCAG---ATAACAATAATCCaaattaaaat--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ttgatttaattacataatt---taaaatGACACCAGAATACTAGTAAAAATGTAGATAA--GTTTATATAATCCTTTTTAGCTGTAGGACTTTATTAGCATAAATTCAAATACAGGAACCAAAGTAAGATTGAGACCTAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122600 274 - 99891981 ATTCCCAAGCTCTTATAATGCACAGCATAAAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAGATCCTTAACTCAGATAATAACAATAATCCAAATTAAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGAATACTAGTAAAAATGTAGAAAA--GTTTATATAATCCTTTTTAGCTGTAGGACTTTATTAGCATAAATTCAAACACAGGAACCAAAGTAAGATTAAGACCTAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349353 270 + 185818997 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAAATCCTTAACTCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGACTACTAGTAAAAATGTAAGTAA--GTTTATATAATCCTTTTTAGCCGTAGGACTGTATTAGCATAAATTCAAATACAGGAG-AAAAGTAAGATTGAGAGCTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995051 271 - 192294377 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAAATCCTTAACTCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGACTACTAGTAAAAATGTAAGTAA--GTTTATATAATCCTTTTTAGCCGTAGGACTGTATTAGCATAAATTCAAATACAGGAGCAAAAGTAAGATTGAGAGCTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342271 271 - 3123512 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAAATCCTTAACTCAG---ATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGACTACTAGTAAAAATGTAAGTAA--GTTTATATAATCCTTTTTAGCCGTAGGACTGTATTAGCATAAATTCAAATACAGGAGCAAAAGTAAGATTGAGAGCTGT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7575635 274 - 10077455 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAAATCCTTAACTCAGATAATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGACTACTAGTAAAAATGTAAGTAA--GTTTATATAATCCTTTTTAGCCGTAGGACTGTATTAGCATAAATTCAAATACAGGAGCAAAAGTAAGATTGAGAGCTGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515313 274 - 127223203 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATTGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAAATCCTTAACTCAGATAATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGAATACTAGTAAAAATGTAGGTAA--GTTTATATAATCCTTTTTAGCCATAGGACTGTATTAGCATAAATTCAAATACACGAGCAAAAGTAAGATTGAGAGCTGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631207 274 + 1799296 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATAAGAAAATTAAAAATTTAAATCCTTAACTCAGATAATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAATT---TAAAATGACACCAGACTACTAGTAAAAATGTAGGTAA--GTTTATATAATCCTTTTTAGCCGTAGGACTGTATTAGCATAAATTCAAATACAGGAGCAAAAGTAAGATTGAGAGCTAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5182639 273 - 6934359 AATCTTAATCTCTTATAGTGCACATCATATAAAGGGCAGATTAGTCAATATATGGTTCAGAAATAATGATGTAATA-TTTATGAGAAAATTAAAAATTTAATTCCTTAACTCAGATAATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTAATTACATAA-T---TAAAATGACACCAGGATACTAGTAAGAATGTAGGTAA--ATTTATATAATCCTTTTTAGCCGTAGGACTGTATTAGCATAAATTCAAATACAGGAGCAAAAGTAAGATTGAGAGCTGT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058112 275 + 128169293 AATTTCAAGTTCTTATAATGCACTTCGTATAAAGGGCAGGTTAGTCAATATATGGTGCAGAAATAATCATGTAATACTTTATAAGAAAATTAAAAATTTAGAGACTTAACTCAGATAATAACAATAACCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTTAATTATGTAATT---AAAAATGACATCAGAAAACTACTAAAAATGTAGATAA--GTTTACATAATCCTTTTTAGCTGTAGGACTTTCTTAGCATAATTTCAAATACAAGAACCAAAATAAGATTGAGAGATAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17643324 275 + 18371965 AATCCCAAGTTCTTATAATGCACTTCATATAAAGAACAGATTAGTCAATATATGGTGCAGAAATAATCATGTAATAGTTTATAAGAAAATTAACAATTTAGAGCCTTAACTGAGATAATAACAATACCCCAAATTAAAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTTCATTATGTAATT---AAAAATGACATCAGAAAACTACTAAAAATGTCGATAA--GTTTACATTATCCTTTTTAGCTGTAGGACTCTCTTAGCATAAATTCAAATACAGGAACCAAAATAAGATTGAGAGACAT i saiBol1.JH378145 I 195 C 0 s cebCap1.NW_016107540v1 2178020 274 - 3566421 AGTCCCAAGTTCTTATAATGCACTTTGTATAAAGGACAGGTTAGTCAATATATGGTGCAGAAATAATCATGTAATACTTTATAAGAAAATCAAAAATTTAGAGCCTTAACTCAGATAATAACAATAACCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTTAATTATGTAATT---AAAAAAGACATCAGAAAACTACCAAAAATATAGATAA--GTTTACATAATCCTTTTTAGCTGTAGGACTTTCTTAGCATAAATTCAAATACGGGAACC-AAATAAGATTGAGAGATAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7377450 275 + 9267652 AATCCCAAGTTCTTATAATGCACTTCATATAAAGGGCAGGTTAGTCAATATATAGTGCAGAAATAATCATGTAATTCTTTATAAGAAAATTAAAAATTTAGAGCCTTAACTCAGATAATAACAATAATCCAAATTAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTTAATTATGTAATT---AACAATGACATCAGAAAACTACTAAAAATGTAGATGA--GTTTACATAATCCTTTTTAGCTGTAGGACTTTCTTAGCATAAATTCAAATACAGGAACCAAAATAAGATTGAGAGATAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1593235 453 - 14340318 -ATTCCCTGATCTTATAATGCAGA-CATGTAAAAGGCAGATTAGTCA--TTGTGGTCTAGGAATAAAATGATAA---TTTATAAGGAAA---ATAATTTAGAACCTTACCCCATATAATAACAATAATCCAAATTAAAATGgctgagtgcagtggctgactcttagaatgtaaactcctagaactttaggagactgagttcaggaagatttcttgatcccaggatttcaaagttacaataagcaataatcatgccactgtactgatttttatctgtagtctgagcaacagagtgagagctgtctataaaatttaaaaaaTTTTGAAAATGCatttaattatataattatataaaat----tCAGAAAACTACTAA-AATACAAACAATAGTTCATATAATACTTTGTAGCCATAAAACTTTATTAGCATATGTTCAAAAATGGAAGACAAAATAAAAATATAAAACAT i otoGar3.GL873564 C 0 I 2319 s dasNov3.JH578441 253666 245 - 1446996 AATCTCAAGTTCTTATAACACATATCCTATAAAGGGCAGGGTAGTCCATATGGAATGCTAGGAAAATGTGataa---tttattataaaataaaaaatatat----------------aGAATGACATTCTTTATTCAAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATAAGG---ACAAATTAAATTTGAACACTAATAAAGATAGAGATGGTGAGTTATATAATCCTTTGCAGGTACAGGGATTTTTT-GAATAGATTCAAATACATAAATCAAAG--AGACTGAGATACAT i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=302434.000000 s hg38.chr14_KI270725v1_random 113397 29 + 172810 -AGTC-------AAAGGTTAAAATGTACACATTATAA s panTro5.chr1 126674790 29 + 228573443 -AGTC-------AAAGGTTAAAATGTACACATCATAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674110 29 + 162613886 -AGTC-------AAAGGTTAAAATGTACACATTATAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93602 29 + 126596 -AGTC-------AAAGGTTAAAATGTACACATTATAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684858 29 + 72422247 -AGTC-------AAAGGTTAAAATGTACACATTATAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122874 29 - 99891981 -AGTA-------AAAGGTTAAAATGTACATGTTACAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349623 29 + 185818997 -AGTA-------AATGGTTAAAATGTACACATTATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995322 29 - 192294377 -AGTA-------AATGGTTAAAATGTACACATTATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342542 29 - 3123512 -AGTA-------AATGGTTAAAATGTACACATTATAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7575909 29 - 10077455 -AGTA-------AATGGTTAAAATGTACACATTATAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515587 29 - 127223203 -AGTA-------AACGGTTAAAATGTACGCATTATAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631481 29 + 1799296 -AGTA-------AATGGTTAAAATGTACACATTATAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5182912 29 - 6934359 -AGTA-------AAAGGTTAAAATGCACACATTACAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058387 29 + 128169293 -AGTA-------AAAGCCTAAAATGTACACattataa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17643599 29 + 18371965 -AGTA-------AAAGCCtaaaatataaacataaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2178294 29 - 3566421 -AGTA-------AAAGCCTAAAATGTACACattataa i cebCap1.NW_016107540v1 C 0 I 245 s aotNan1.NW_018514471v1 7377725 29 + 9267652 -AGTA-------AAAGCCtaaaatgtacacattataa i aotNan1.NW_018514471v1 C 0 I 242 s otoGar3.GL873564 1596007 29 - 14340318 -AATT-------AAAGTTTAAAATACATGCAGTGTGC i otoGar3.GL873564 I 2319 C 0 s dasNov3.JH578441 253911 37 - 1446996 TAATAATTGAATAAGGTATAAAATACATGCTTTATAA i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=334283.000000 s hg38.chr14_KI270725v1_random 113426 74 + 172810 GGGCATGATTAA--ACTAATTTAAAGC----------------------------------------------------------------------ATAAT--AACATGGAGAA-ATGTTGCAAAACATATA-TTT---TACTGAATTAATT s panTro5.chr1 126674819 74 + 228573443 GGGCAAGATTAA--ACTAATTTAAAGC----------------------------------------------------------------------ATAAT--AACATGGAGAA-ATATTGCAAAACATACC-TTT---TACTGAATTAATT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674139 74 + 162613886 GGGCATGATTAA--ACTAATTTAAAGC----------------------------------------------------------------------AGAAT--AACATGGAAAA-ATATTGCAAAACATACA-TTT---TACTGAATTAATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93631 72 + 126596 GGGCATGATTAA--ACTAATTTAAAGC----------------------------------------------------------------------AT-AT--AACATGGAGAA-ATATTGCAAAACATACA-TTT---TACTGAATTAA-T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684887 74 + 72422247 GGGCAGGATTAA--ACTAATTTAAAGC----------------------------------------------------------------------ATAAT--AACATGGAGAA-ATATTGAAAAACATACA-TTT---TACTGAATTAATT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122903 74 - 99891981 TGGCGTGATTAA--ACTAATTTAAAGC----------------------------------------------------------------------ATAAT--AACATGGGGAA-ATATTGCAAAATATATA-TTT---TATTGTATTAATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349652 66 + 185818997 TGGTATAATTAA--AC-----TAAAGC----------------------------------------------------------------------AT------CCATGGAGAA-ATATTACAAAATATACATTTT---TACTGTATTAATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995351 66 - 192294377 TGGTATAATTAA--AC-----TAAAGC----------------------------------------------------------------------AT------CCATGGAGAA-ATATTACAAAATATACATTTT---TACTGTATTAATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342571 66 - 3123512 TGGTATAATTAA--AC-----TAAAGC----------------------------------------------------------------------AT------CCATGGAGAA-ATATTACAAAATATACATTTT---TACTGTATTAATG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7575938 71 - 10077455 TGGCATAATTAA--ACTAATTTAAAGC----------------------------------------------------------------------AT------CCATGGAGAA-ATATTACAAAATGTACATTTT---TACTGTATTAATG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515616 71 - 127223203 TGGCATAATTAA--ACTAATTTAAAGC----------------------------------------------------------------------AT------CCATCGAGAA-ATACTGCAAAATATACATTTT---TACTGTATTAATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631510 71 + 1799296 TGGCATAATTAA--ACTAATTTAAAGC----------------------------------------------------------------------AT------CCATCAAGAA-ATATTACAAAATATACATTTT---TACTGCATTAATG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5182941 71 - 6934359 TGGCATAATTAA--ACTAATTTAAAGC----------------------------------------------------------------------AT------TCATCGAGAA-ATATTGCAAAATGTACATTTT---TACCGCATTAATG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058416 131 + 128169293 --------ttaaatactaattagaaacaaattaattataatctataatcatatattatatattataatttatattaaatatattaCACATTATAAGCAT------ATAATAATAA-ATACTGCAAAATATACA-TTT---TATGA---TATTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17643628 76 + 18371965 --------ataaatactaaataaaaac------------------------------------------------------atcacacattata---at------ataataataa-ataCTGC-AAATATACA-TTT---TATGATATTATTG i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 1596036 75 - 14340318 -TGCATAATTAA--GCCAAT-TAAAAT----------------------------------------------------------------------ACAATTAGTTATCTAAAGTATATGGAAAAATACACA-TTT---TATAGTGTTAACA i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 253948 75 - 1446996 TGACACAATTAA--AGTAATTAAAAAC----------------------------------------------------------------------AG----TGACATGGAGAA-ATATTGCAAGACATTCA-TGTAAAAACTGAATATATT i dasNov3.JH578441 C 0 I 1605 e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7377754 242 + 9267652 I e cebCap1.NW_016107540v1 2178323 245 - 3566421 I a score=576997.000000 s hg38.chr14_KI270725v1_random 113500 101 + 172810 GTTAA------TATCT----AATCATTATGTAAGAACA---------------AAATTAAAGAGTAG-----------CTACAC----AAGCACACACCCACACACAAGTGCAATATTGTCAAATAAA------CGATGTTCAGCTA s panTro5.chr1 126674893 101 + 228573443 GTTAA------TATCT----AATCATTATGTGAGAACA---------------AAATTAAAGAGTAG-----------CTACAC----AGGCACACACCCACACACAACTGCAATATTGTCAAATAAA------CGATGTTCAGCTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674213 101 + 162613886 GTTAG------TATCT----AATCATTATGTGAGAACC---------------AAATTAAAAAGTAG-----------CTACAC----ATGCACACACCCACACATAAGTGCAATATTGTCAAATCAA------CGATGTTCAGCTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93703 100 + 126596 GTTAA------TATCT----AATCATTATGTGAGAACA---------------AAATTAAAGAGTAG-----------CTAAAC----AGGCACACACCCA-ACACAAGTGCAATATTGTCAAATAAA------CGATGTTCAGCTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5684961 107 + 72422247 GTTAA------TATCT----AATCATTAAGTGAGAACA---------------AAGGTAAAGAGTAG-----------CTACACACAAACACACACACCCACACAAAAGTGCAATATTGTCAAATAAA--T--GTGATGTTCAGCTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44122977 101 - 99891981 GTTAATATTCTTATTT----AATCAT----TGAGAACA---------------AAGGTAACGAGTAG-----------CTacac--------acacacacacacacaAGTGCAATATTGACAGATAAA--C--GTGATGTTCAGCTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349718 112 + 185818997 GTTAATATTCTTATTT----AATCATTAAATGAGAACATCAATTCTTT----GCAGATAAAGAGTAG-----------CTACAC----A----------CACACACAAGTGCAATATTGTCAAATAAATAC--ATGATGTTCAGCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995417 112 - 192294377 GTTAATATTCTTATTT----AATCATTAAGTGAGAACATCAATTCTTT----GCAGATAAAGAGTAG-----------CTACAC----A----------CACACACAAGTGCAATATTGTCAAATAAATAC--ATGATGTTCAGCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342637 112 - 3123512 GTTAATATTCTTATTT----AATCATTAAGTGAGAACATCAATTCTTT----GCAGATAAAGAGTAG-----------CTACAC----A----------CACACACAAGTGCAATATTGTCAAATAAATAC--ATGATGTTCAGCTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576009 112 - 10077455 GTTAATATTCTTATTT----AATCGTTAAGTGAGAACATCAATTCTTT----GCAGATAAAGAGTAG-----------CTACAC----A----------CACACACAAGTGCAATATTGTCAAATAAATAC--ATGATGTTCAGCTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515687 112 - 127223203 GTTAATATTCTTATTT----AATCATTAAGTGAGAACATCAATTCTTT----GCAGGTAAGGAGTAG-----------CTACAC----A----------CACACACAAGTGCAGTATTGTCAAGTAAATAC--ATGATATTCAGCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631581 112 + 1799296 GTTAATATTCTTATTT----AATCATTAAGTGAGAACATCAATTCTTT----GCAGGTAAAGAGTAG-----------CTACAC----A----------CACACACAAGTGCAATACTGTCAAATAAATAC--ATGATGTTCAGCTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183012 112 - 6934359 GTTAATATTCTTATTT----AATCATTAAGTGAGAACATCAGTTCTTT----GCAGGTAAAGAGTAG-----------CTACAC----A----------CACGTACAAGTGCAATATTGTCAAATAAATAC--ATGATGTTCAGCTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058547 104 + 128169293 GTTAATA---TTATTT----AATCATTCAGTAAGAACATCAAGTCTTTACACGTAGGTAATGAGTAG-----------CTATAC----A----------CACATACAAGTGCAATGTGGTCAAACAAT-----GTGATGTT------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17643704 97 + 18371965 GTTAATGTTCTTATTT----ACTCATTCAGTGAGAACATCAAGTCTTTACAGGTAGGTA---------------------ACAT----A----------CACACACACGTGCCATGTGGTCAAATAAT-----GTGATGTT------ i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 1596111 139 - 14340318 GTTAAT-TTTTTATTTCATAAATCATTAAGTGAGAATATCTGGTCTTAA---GTAGGTAAAAAATAGTCACAGCAAAACTACAA----ATGCATGTGCACACACACATGAGAGATATGGGTAAATAAGCACGGAAGACATTTAACCA i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7377754 242 + 9267652 I e cebCap1.NW_016107540v1 2178323 245 - 3566421 I a score=1050829.000000 s hg38.chr14_KI270725v1_random 113601 110 + 172810 CACTAGAAATCACATCTGTGTTTT-CTCCACAGA-----AAAGATTAAAAATCACAATAATATTTATTGTACATACGGAGGtaaagatactcaaa--atattaccctaaaata------ca----t-tt s panTro5.chr1 126674994 116 + 228573443 CACTAGAAATCACACCTGTGTTTT-CTCCACAGAAGAGTAAAGATTAAAAATCACAATATTATTTATTGTACATATGGAGGtaaagatactcaaa--atattacccaaaaatg------ca---tt-tt i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674314 112 + 162613886 CACTAGAAATCACACCTGTGTTTT-CTCCACAGA-----AAATATTAGAAATCACAAGAATTTTTATTGTACATATGGAGGtaaagatactcaaa--atattaccctaaaata------ca---ttatt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93803 109 + 126596 CACTAGAAATCACACCTGTGTTTT-CTCCACAGA-----AAAAATTAAAAATCACAA-AATATTTATTGTACATATGGAGGtaaagatactcaaa--ttattaccctaaaata------ca----t-tt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685068 119 + 72422247 CACTAGAAATCACACCTGTGTTTT-CTCCACAGAAGAGTAATGATTAAAAATCACAATAATATTTATTGTACATATGGAGAtaaagatactcaaa--ctattaccctaaaata------ctttttt-tt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123078 119 - 99891981 CACTAGAAATCACACCTGTTTTTT-CTCCAAAGAAGAGTAAAGATTAAAAATCACAATAATATTTATTGTACATATGGAGGtaaagatactcaaa--atattaccctaaaata------cattttt-tt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349830 115 + 185818997 CACTAGAAATCACACCTGTTTTTTTCTCTACACAAGAGTAAAGATTAAAAATCACAATAATAGTTATTGTACATAtggaggtaaacaaactcaaa----tttaccctaaaata------ca---tt-tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995529 115 - 192294377 CACTAGAAATCACACCTGTTTTTTTCTCTACACAAGAGTAAAGATTAAAAATCACAATAATAGTTATTGTACATAtggaggtaaacaaactcaaa----tttaccctaaaata------ca---tt-tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342749 115 - 3123512 CACTAGAAATCACACCTGTTTTTTTCTCTACACAAGAGTAAAGATTAAAAATCACAATAATAGTTATTGTACATAtggaggtaaacaaactcaaa----tttaccctaaaata------ca---tt-tt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576121 118 - 10077455 CACTAGAAATCACACCTGTTTTTTTCTCTACAGAAGAGTAAAGATTAAAAATCACAATAATAGTTATTGTACATAtggaggtaaacaaactcaaa----tttaccctaaaata------cattttt-tt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515799 117 - 127223203 CACTAGAAGTCACACCTGTTTTTTCCTCCACAGAAGAGTAAAGATTAAAAATCATAATAGTAGTTATTGTATATATGGAGGtaaacaaactcaaa--atattaccctaaaata------ca---tt-gt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631693 115 + 1799296 CACTAGAAATCACACCTGTTTTTTTCTCCACAGAAGAGTAAAGATTAAAAATCACAATAATAGTTATTGTACATAtggaggtaaacaaactcaaa----tttaccctaaaata------ca---tt-tt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183124 120 - 6934359 CACTAGAAATCACGCCGGTTTTTTTCTCCACAGAAGAGTAAAGGTTAAAAATCATAATAACAGTTATTGTACATATGGAGGtaaacaaactcaaa--atattaccctaaaatg------cattttt-at i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058651 118 + 128169293 CACTAGAAATCACACCTGTTTTTT-CTCTACAGAAGAGTAAAAATTAAAAGTTACAATAGTAGTTAATGTACGTATGGAGGtaaagaaacccaaaatattttaccctaaaata------ct---tt-tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17643801 123 + 18371965 CACTAGAAATCACACCTATTTTTT-CTCTACAGAAGAGTAAAGATTAAAAGTCATCATAATGGTTAATGTACATATGGAGGtaaagaaacccaaaatattttaccctaaaata-ccctccc---tt-tt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2178568 124 - 3566421 CACTAGAAATCACACCTGTTTTTT-CTCTACAGAAGAGTAAAGATTAAAAGTTACAATAATAGTTAATGTACGTATGGAGGtaaagaaacccaaaatattttaccctaaaataactttttt---tt-tt i cebCap1.NW_016107540v1 I 245 C 0 s aotNan1.NW_018514471v1 7377996 119 + 9267652 CACTAGAAATCACACCTGTGTTTT-CACTACAGaaaagtaaagattaaaagttacaataatagttaaTGTACGTATGGAGGCAaagaaacccacaatattttaccctaaaata-----ccc---tt-tg i aotNan1.NW_018514471v1 I 242 C 0 s otoGar3.GL873564 1596250 97 - 14340318 CACCAGAAATCACGCCCATGTCTTTTCTCACACAATGGC---------------------CATTCATTGTTGGCATGGAGAtgaatgcaaactaactatttcactcacaaata------ta---ct-t- i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=2660417.000000 s hg38.chr14_KI270725v1_random 113711 268 + 172810 ttttt----gagatggagttttgcttttgttgcccaggctagagtgcaatggcacaatcttggctcactgcaacctcagcct-cccagggtcaagtaattctcctagctcagcctcccaagtagctgagattacaggcatgcaccaccacactcggctaa-ttttttgtatttagtagagacggggtttcaccatgttggtcaggctggtctccaactcctgacttcaggtgatctaccca------cttcagcctcccaaagtgctgggattacaggcg s panTro5.chr1 126675110 268 + 228573443 ttttt----gagatggagttttgcttttattgcccaggctagagtgcaatggcacaatcctggctcactgcaacctcagcct-accagggtctagtgattctcctagctcagcctcccaagtagctgagattacagtcatgcaccaccacactaggctaa-ttttttgtatttagtagagacggggtttcaccatgtaggtcaggctggtctccaactcctgacttcaagtgatctaccca------cttcagcctcccaaagtgttgggattacaggcg i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674426 268 + 162613886 ttttt----gagatggagttttgcttttattgcccaggctggagtgcaatggcacaatcttggctcactgcaacctcagcct-cccagggtcaagtaattctcctagctcagcctcccaagtagctgagattacaggcatgcaccaccacacttggctaa-ttttttgtatttagtagagacgggttttcaccatgtaggtcaggctggtctccaacacctgacttctggtgatctaccca------cttcagcctcccaaagtgctgggattacaggcg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 93912 263 + 126596 ttttt----gagatggagttttgcttttattgcccaggctagagtgcaatggcacaatctt-gctcactgcaacctcagcct-cccagggtcaagtaat--tgctagctcggcctcccaagtagctgagattacaggcatgcaccac--aactcggctaa-ttttttgtatttagtagagacggggtttcaccatgtaggtcaggctggtctccaactcctgacttcaggtgatctaccca------cttcagcctcccaaagtgctgggattacaggca i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685187 268 + 72422247 ttttt----gagatggagttttgcttttgttgcccaggctggagtgcaatggcacaatcttggct-actgcaacctcagact-cccagggtcaagtaatcctcctagctcagcctcccaagtagctgagattacaggcatgtgccaccacacttggctaatttttttgtatttagtagagatggggtttcaccaagttggtcaggctggtcttgaactcctgacttcaggtgatctaccca------cttcagcctcccaaagtgctgggattacaggcg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123197 268 - 99891981 ttttt----gagatggagttttgcttttattgcccaggctggagtgcaatggcacaatcttggctcactgcaacctcagcct-cccagggtcaagtaattctcctgcctcagcctcccaagtagctgagattacaggcatgcaccaccacactcagctaa-ttttttgtatttagtagagacggggtttcaccatgttggtcaggctggtctcgaactcctgacctcaggtgatctaccca------cttcagcctcccaaagtgctgggattacaggcg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52349945 273 + 185818997 ttttttaatgagacggagttttgcttttgttgcccaggctggagtgcaattgcacagtctcagctcattgcaacctctgcctccccagagtcaagcaactctcctgcctcagcctcccaagtagctaagattacaggcatgtgctgccatacttatctaa-ttttttgtatttagtagagacggggtttcatcatgttggtcaggctgatctcaagctcctgacctcaggtgatccaccca------cctcagcctcccaaggtgctgggattacagggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995644 273 - 192294377 tttttttatgagacggagttttgcttttgttgcccaggctggagtgcaattgcacagtctcagctcattgcaacctctgcctccccagagtcaagcaactctcctgcctcagcctcccaagtagctaagattacaggcatgtgctgccatacttatctaa-ttttttgtatttagtagagacggggtttcatcatgttggtcaggctgatctcaagctcctgacctcaggtgatccaccca------cctcagcctcccaaggtgctgggattacagggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 342864 273 - 3123512 tttttttatgagacggagttttgcttttgttgcccaggctggagtgcaattgcacagtctcagctcattgcaacctctgcctccccagagtcaagcaactctcctgcctcagcctcccaagtagctaagattacaggcatgtgcttccatacttatctaa-ttttttgtatttagtagagacggggtttcatcatgttggtcaggctgatctcaagctcctgacctcaggtgatccactca------cctcagcctcccaaggtgctgggattacagggg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576239 273 - 10077455 tttttttatgagacggagttttgcttttgttgcccaggctggagtgcaatagcacagtctcagctcattgcaacctctgcctccccagagtcaagcaactctcctgcctcagcctcccaagtagctgggattacaggcatgtgccgccatacttatctaa-ttttttgtatttagtagagacggggtttcatcatgttggtcaggctgatctcaagctcctgacctctggtgatccaccca------cctcagcctcccaaggtgctgggattacagggg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121515916 270 - 127223203 tattt--atgagacggagttttgcttttgttgcccaggctggagtgcaatagcacagtctcagctcactgcaacctctgcct-cccagagtcaagcaattttcctgcctcagcctcccaagtagctgagattacaggcatgtgccgccatacttgtctaa-ttttttgtatttagtagagacggggtttcatcatgttggtcaggctgatctcaaactcctgacctcaggtgatccaccca------cctcagccttccaaagtgctgggattacagggg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 631808 270 + 1799296 ttttt-aatgagacggagttttgcttttgttccccaggctggagtgcaatagcacagtctcagctcactgcaacctctgcctccccagagtcaagcaattctcctgcctcagcctcccaagtagctaagattacaggcatgtggcgccatacttatctaa-ttttttgtatttagtagagacggggtttcatcatgttggtcaggctgatctcaagctcctgacctcaggtgatccaccca------cctcagcctcccaaggtgctgggattacacg-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183244 273 - 6934359 tttttttatgagaaggagttttgcttttgttgcccaggctggagtgcaatagcacactctcagctcactgcaacctctgcctccccagagtcaagcaattctcctgcctcagcctcccaagtagctaagattacaggcatgtgccaccatacttgtctaa-ttttttgtatttagtggagacggggtttcatcatgttggtcaggctgatctcaaactccttacctcagatgatccaccca------cctcagcctccccaagtgctgggattacagggg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20058769 273 + 128169293 ttttt----gagacagagttttgctctagttgtccaggctggagtgcattggcacaatttcagctcactgcaacctccacct-ccca-gttcaagggattctcctgcctcagactctcaagtagctgagattacaggcatttaccattatgcctagctca-ttctttgtatttagtagaggcagggttttactatgttggtagtgcagatctccaacccctgacctcaggagatccacccatctcggcctctgcctcccaaagtgctgggattacagacc i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 17643924 274 + 18371965 ttttt----gagacagagttttgctctggttgcccaggctggagtgcagtggcacaatttcagcgcactgcaacctccacct-cccaggttcaatggattctcctgcctcagactctcaagtagctgagactacaggcgtgtaccactatgcctggctca-gtctttgtatttagtagaggcagggttttactatgttggtagggctggcctcgaactcctgacctcaggagatctgcccatctcggcctctgcctccctaagtgctgcgattacaggct i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 2178692 274 - 3566421 ttttt----gagacggagttttgctctagttgcccaggctggagtgcagtggcacaatttcagctcactgcaacctccacct-cccaggttcgagggattctcctgcctcaggctctcaagcagctgagattacaggcttgtaccactatgcctggctca-ttctttgtatttagtagaggcagggttttactatgttggtagggctggtctcgaactcctgacctcaggagatccgcccatctcggcctctgcctcccgaagtgctgggattacaggcc i cebCap1.NW_016107540v1 C 0 I 14 s aotNan1.NW_018514471v1 7378115 274 + 9267652 ttttt----gagacagtgttttgctctagttgcccaggctgaagtgcagtggcgcaatttcagctcactgcaacctccacct-cccaggttcaagggattctcctgcctcagactctcaagtagctgagattacaggcatgtaccactatgcctggctca-ttctttgtatttagtagaggcagggttttactatgttggtagggctggtctcgaactcctgacctcaggagatccacccatctcggcctctgcctcctgaagggctgagattacaggcc i aotNan1.NW_018514471v1 C 0 I 2 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1596347 0 - 14340318 C a score=58012.000000 s hg38.chr14_KI270725v1_random 113979 13 + 172810 tgcacc--------tgggcag s panTro5.chr1 126675378 13 + 228573443 tgcacc--------tggccag i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674694 13 + 162613886 tgcgcc--------tggccag i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94175 13 + 126596 tgcgcc--------tggccag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685455 13 + 72422247 tgcacc--------tggccaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123465 13 - 99891981 tgcaca--------tggccaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350218 21 + 185818997 tgcaccactgcacggggccaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995917 21 - 192294377 tgcaccactgcacggggccaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343137 21 - 3123512 tgcaccactgcacggggccaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576512 21 - 10077455 tgcaccactgcacggagccaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516186 21 - 127223203 tgcaccactgcacggggccaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632078 13 + 1799296 --------tgcactgcgccaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183517 21 - 6934359 tgcaccactgtacggggccaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059044 13 + 128169293 tgcact--------cggcaca i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 17644200 13 + 18371965 tgcacc--------cggcaca i saiBol1.JH378145 I 2 C 0 s aotNan1.NW_018514471v1 7378391 13 + 9267652 tgcacc--------aggcaca i aotNan1.NW_018514471v1 I 2 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1596347 0 - 14340318 C e cebCap1.NW_016107540v1 2178966 14 - 3566421 I a score=13600.000000 s hg38.chr14_KI270725v1_random 113992 1 + 172810 c s panTro5.chr1 126675391 1 + 228573443 c i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674707 1 + 162613886 c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94188 1 + 126596 c i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685468 1 + 72422247 c i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123478 1 - 99891981 c i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350239 1 + 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995938 1 - 192294377 c i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343158 1 - 3123512 c i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576533 1 - 10077455 c i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516207 1 - 127223203 c i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632091 1 + 1799296 c i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183538 1 - 6934359 c i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059057 1 + 128169293 c i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17644213 1 + 18371965 c i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2178980 1 - 3566421 c i cebCap1.NW_016107540v1 I 14 C 0 s aotNan1.NW_018514471v1 7378404 1 + 9267652 c i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1596347 0 - 14340318 C a score=3003292.000000 s hg38.chr14_KI270725v1_random 113993 271 + 172810 tttttgacatatttcaagatggctactcggaagactagagatagcttcttctacaagaatagctgaaaagctgtgtttgttgggg-agatttgcatttgtagagaaaaactgtattgatgtagacaggctttccctgagatactcccttgtgtgggtttaggaaagattaac--tgagtctggcacgtttacatttct---aaaaaccaattcctatctatacttcccaagaggagggctgctccctgtgatgtttcatccatgtaacaagaccacc---- s panTro5.chr1 126675392 271 + 228573443 tttttgacatatttcaagatggctactcggaagactggagatagcttcttctacaaaaatagctgaaaagctgtgtttgttgggg-agatttgtatttgtagagaaaatatgcattgatatagacaggctttccttgagatactcccttgtctgggtttaggaaagattaac--tgagtctggcacgtttacatttct---aaaaaccatttcgtatttatacttcccaagaggagggctgctccctgtgaggtttcatctatgtaacaagaccacc---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674708 271 + 162613886 tttttgacatatttcaagatggctactcggaagactggagatagcttcttctacaagaatagatgaaaagctgtgtttgttgggg-agatttgcatttgtagagaaaatctgcattgatatagacaggctttccctgagatactccctggtctgggtttaggaaagattaac--tgagtctggcacgtttacatttct---aaaaaccatttcctatctatacttcccaagaggagggctgctccctgtgaggtttcaaccatgtaacaagaccacc---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94189 269 + 126596 tttttgacatatttcacgatggctactcggaagactggagatagcttcttctacaagaatagctgaaaagctgtgtttgttgggg-agatttgcatttgtagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtttaggaaagattaac--tgagcctggcacgtttacatttct---aaaaaccatttcctatctatacttcccaagagga-ggctgct-cctgtgaggtttcatccatgtaacaagaccacc---- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685469 271 + 72422247 tttttgacatatttcaagatggctactcggaagactggaaatagcttcttctagaagaatagctgaaaagctgtgtttgttgggg-agatttgcatttgtagagcaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtttaggaaagattaac--tgagtctggcacgtttacattttt---aaaaaccatttcctatctatacttcccaagaggagggctgctccctgtgaggtttcatccatgtaacaagaccacc---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123479 268 - 99891981 tttttggcatatttcaagatggctactcggaagactggaaatag---cttctacaagaatagctgaaaagccgtgtttgttggag-agatttggatttgtagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtttaggaaagattaac--tgagtctggcatgtttaaagttct---aaaaaccatttcctatctattcttcccaagaggagggctgctccctgggaggtttcatccacgtaacaagaccacc---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350240 272 + 185818997 tttttgacatatttcaacatggctactcggaagacaggaaatagcttcttctacaagaatagctgaaaacctagctttgttgggg-agatttgcattggaagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaact-tgagtctggcacgtttaaagttct---aaaaatcatttgctatctattcttcccaaggggagggctgctccctgtgaggtttcatccacaaagcaagatcacc---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124995939 272 - 192294377 tttttgacatatttcaagatggctactcggaagacaggaaatagcttcttctacaagaatagctgaaaacctagctttgttgggg-agatttgcattggaagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaact-tgagtctggcacgtttaaagttct---aaaaatcatttgctatctattcttcccaaggggagggctgctccctgtgaggtttcatccacaaagcaagatcacc---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343159 272 - 3123512 tttttgacatatttcaagatggctactcggaagacaggaaatagcttcttctacaagaatagctgaaaacctagctttgttgggg-agatttgcattggaagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaact-tgagtctgacacgtttaaagttct---aaaaatcatttgctacctattcttcccaaggagagggctgctccctgtgaggtttcatccacaaagcaagatcacc---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576534 272 - 10077455 tttttgacatatttcaagatggctcctcggaagacaggaaatagcttcttctacaagaatagctgaaaacctagctttgttgggg-agatttgcattggaagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtctaagaaagattaact-tgagtctggcacgtttaaagttct---aaaaatcatttcctatctattcttcccaaggggagggctgctccctgtgaggtttcatccacaaagcaagatcacc---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516208 272 - 127223203 tttttgacatatttcaagatggctactcggaagacaggaaatagcttcttctacaagaacagctgaaaacctagctttgttgggg-agatttgcatttgtagagaaaatctacattgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaact-tgagtctggcacgtttaaaggtct---aaaaaccatctcctacctattcttcccaaggggagggctgctccctgtgaagtttcatccacataacaagaccacc---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632092 272 + 1799296 tttttgacatatctcaagatggctactcggaagacaggaaatagcttcttctacaagaatagctgaaaatctagctttgttgggg-agatttgcatttgtagagaaaatctgcagtgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaact-tgagtctggcacgtttaaagttct---aaaaatcatttcctatctattcttcccaaggggagagctgctccctgtgaagtttcatccacataacaagaccacc---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183539 272 - 6934359 tttttgacatatttcaagatggctactcggaagacagggaatagcttcttctacaagaatagctgaaaacctagctttgttgggg-agatttgcatttgtagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtttgggtctaggaaagattaact-tgagtctggcacgtttaaaggtct---aaaaaccatctcctatgtattcttcccaaggggagggctgctccctgtgaagttccatccacgtaacaagaccacc---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059058 270 + 128169293 catttgacatatttcaagatggctactcacaagacc-gaaacagcttcttctacaagtgtagctgaaaagctgtctttgttgggg-agatttgcatttgtagagaaaatctgcattgttatagacaggctttccctgagatactcctttgtctgtgtctagggaagattaac--tgagtttggcacctataaaggtct---aaaaaccatttcccatctattcttcccaaggggtgggctgctctctgtgaggcttcatacacataacaagaccacc---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17644214 268 + 18371965 cttttgacatgtttcaagatggctactcagaggaca-gaaacagcttcttccacaagagtagctgaaaagctgtctttgttggcg-agatttgcatttgcag-gaaaatctgttttgataaagacaggctttgcctgagatactcccttatctgggtctaggaaagattaac--tgagtttggcacctttaaaggtct----aaaaccatttcccatctattctttccaaggggagggctgctccctgtgaggcttcatacacatggcaagaccccc---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2178981 270 - 3566421 cttttgacatatttcaagatggctacacagaagacc-aaaacagcttcttctacaagagaagatgaaaagctgtctttgttgggg-agatttgcatttgtagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaac--tgagtttggcacctttaaaggtct---aaaaaccgttttccatctgttcttcccaaggggagggctgctccctgtgaggcttcatacacataacaagaccact---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7378405 269 + 9267652 cttttgacgtatttcaagatggctactcagatgacc-caaacagcttcttctacaagagtagctgaaatgctgtctttgttgggg-agatttgcatttgtagagaaaatctgcattgatatagacaggctttccctgagatactcccttgtctgggtctaggaaagattaac--cgagtttggcacatttaaaggtct---aaaaaccacttcccatctgttcttt-caaggggagggctgctccctgtgaggcttcatacacataacaagaccatc---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1596347 261 - 14340318 tttttgacatatttcaaggtggctattcagagcgctggcaa----------tcctagaacagctggaaagctgtcttttatagggcaggtttgtatctgt-gagaaattcttcattgatgtagccaggctttctctgagacacttcct-gtcttgttgtgggaaagaatagctgagagtctgacacctttaaaggtctgacaggagcaggtgccgtcctgcactcc-------gagggct-ccgactacgaggtttcatccatataacaaggccaaccacc i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=1189740.000000 s hg38.chr14_KI270725v1_random 114264 156 + 172810 tctgctgtcaggctcctctttcttccttgtcgtcacctgtattccgcaaagcctgatttaccaacctacagctctgtgttttctgtaacctcaagacagcataGGCGTGTTGACTACCTTGCCTTTTCTGGAGTTTTtatatatatagcatatatt s panTro5.chr1 126675663 156 + 228573443 tctgctgccaggctcctctttcttccttgtcgtcacctgtcttccgcaaagcctgatttaccaacctacagctctgtgttttctgtaacctcaagacagcataGGCGTGTTGACTACCTTGCCTTTCCCGGAATTTTtatatatatagtatatatt i panTro5.chr1 C 0 C 0 s panPan2.chr7 74674979 156 + 162613886 tctgctgccaggctcctctttcttccttgtcatcacctgtcttccacaaagcctgatttaccaacctacagctctgtgttttctgtaacctcaagacagcataGGCGTGTTGACTACCTTGCCTTTCCTGGAGTTTTtatataaagagtatatatt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94458 154 + 126596 tctgctgccaggatcctctttcttccttgtcgtcacctgtctt-agcaaag-ctgatttaccaacctacagctctgtgttttctgtaacctcaagacagcataGGCGTGTTGACTACCTTGCCTTTCCTGGAGTTTTtatataaagagtatatatt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685740 156 + 72422247 tctgctgtcaggctcctctttcttccttgtcatctcctgtcttccgcaaagcctgatttgccaacgtacagctctgtgttttctgtgacctcaagacagcataGGCGTGTTGACTACCTTGCCTTTCCTGGAGTTTTtatatatatagtatgtatt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123747 154 - 99891981 tctgctgccaggctcctc--tcttcctcctcgtcacttgtcttccacaaagcctgatttatcaacatacagctctgtgttttctgtaacctcaagacagcataGACGTGTTAACTACCTGGCCTTTCCTGAAGTTtatatacatatagtatatatt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350512 151 + 185818997 tctgcttgcaggttccttttccttcctcataatcagctgtcttccgcaaagtctgatttaccaacatacagctc--tgttttctgtaacctcaaaacagcataGACGTATTAACTACCTTGCCTTTCCTGGAGTT--tagatatatagtatata-t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996211 152 - 192294377 tctgcttgcaggttccttttccttcctcataatcagctgtcttccgcaaagtctgatttaccaacatacagctc--tgttttCTGTAACCTCAAAACAGGCTAGACGTATTAACTACCTTGCCTTTCCTGGAGTT--tagatatatagtatatact i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343431 152 - 3123512 tctgcttgcaggttccttttccttcctcataatcagctgtcttctgcaaagtctgatttaccaacatacagctc--tgttttctgtaacctcaaaacagcataGACGTATTAACTACCTTGCCTTTCCTGGAGTT--tagatatatagtatatact i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576806 154 - 10077455 tctgcttgcaggttccttttccttcctcataatcacctgtcttccgcaaagtctgatttaccaacatacagctctgtgttttctgtaacctcaaaacggcataGACGTATTAACTACCTTGCCTTTCCTGGAGTT--tagatatatagtatagact i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516480 154 - 127223203 tctgcttgcaggttccttttccttcctcctaatcacctgtcttccgcaaagtctgatttaccaacatacagctctgtgttttctgtaacctcaaaacagcataGACGTATTAACTACCTTGCCTTTCCTGGAGTT--tagatatatagtatatact i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632364 154 + 1799296 tctgcttgcagattccttttccttcctcataatcacctgtcttccgcaaagtctgatttaccaacatagagctctgtgttttctgtaacctcaaaacagcataGACGTATTAACTACCTTGCCTTTCCTGGAGTT--tagatatatagtatatact i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183811 153 - 6934359 tctgcttgcag-ttccttttccttcctcataatcacctgtcttccacaaagtctgatttaccaacatCCAGCTCTGTGTTTTCTGAAACCTCAAAATAGCATAGATGTGTCAACTACCTTGCCTTTCCTGAAGTT--tatatatatagtatatatt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059328 140 + 128169293 tctgctgccagcctcctcttccttcctcactgtcacct------------gcctcatttgccaacataCAGCTCTGTGTTTTCTCTAACCTCA--ACAGCGTGGAAGTGTTAACTATGTTGCCTTTCCTGGAGCT--TTAatatatagtatatatt i calJac3.chr8 C 0 I 2 s cebCap1.NW_016107540v1 2179251 142 - 3566421 tctgctgccagcctcctcttccttccttaccgtcacct------------gcctgatttaccaacatacagctctgtgttttctctaacctcaagacagcatagaagTGTTAACTATCTTGCCTTTCCTGGAGTT--TTtatatatagtatatatt i cebCap1.NW_016107540v1 C 0 I 4 s aotNan1.NW_018514471v1 7378674 142 + 9267652 tctgctgccagcctcctcttccttccttaccatcacct------------gcctgatttaccaacatacagctctatgttttctctaacctcaagacagcatagaagTGTTAATTATCTTGCCTTTCCTGGAGTT--TTtatatatagtatatatt i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 1596608 21 - 14340318 tttgct-------------------------------------------agccagatct-ccAAC------------------------------------------------------------------------------------------- i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e saiBol1.JH378145 17644482 0 + 18371965 C a score=1171286.000000 s hg38.chr14_KI270725v1_random 114420 122 + 172810 tgtatatctatttataatatacaaatatttgta----------tagttatatttttatatattatgtaAACTGCAAGTGCATACTTGTGCAC---------ATATCTGTAAACCTT-----TTTTCTGTTAATTTGTACATTATCA s panTro5.chr1 126675819 123 + 228573443 tttatatctgtttataatatacaaatatttgta----------tagatata-ttatatatattatgtaaactccaagtgcatacttgtgcac---------atatctgtaaacctt---tatttcctgttaatttgtacattatca i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675135 124 + 162613886 tgtatatctctttataatatacaaatatttgta----------tagatatatttatataaattatgtaAACTCCAAGTGCAGACTTGTGCAC---------ATATCTGTAAATCAT---TTTTTCCTGTTAATTTGTACATTATCA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94612 123 + 126596 tgtatatctctttataatatacaaatatttgta----------tagatatattcat-tatattatgtaAACTCCAAGTGCATACTTGTGCAC---------ATATCTGTAAACCTA---TTTTTCCTGTTAATTTGTACATTATCA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5685896 130 + 72422247 cctatatctatttataatgtacaaatatttgta----------tatatatatttatatatattatgtaaactccaagtgcatacttgtgcac---ataattatatctgtaaacctt---tttttcctgttaatttgtacattatca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44123901 140 - 99891981 tgtatatatatttataatatacaaatatttgtatatatttgtgtatatatgtttatatatactatgtaaactccaagtgcatacttgtgcac---ataattatatctgtaaacctt---tttttcctgttaatttgtacattatca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350663 136 + 185818997 tgtatatatgtttataatatacaaatatttgtatatatttgtgtatatatatttatatatattatgtaAACTCCAAGTGCATACTGGTGCAC---ATA---ATATCTGTAAGCCTT---T-TTTTCTGTGAATTTGTACATTATCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996363 136 - 192294377 tgtatatatgtttataatatacaaatatttgtatatatttgtgtatatatatttatatatattatgtaAACTCCAAGTGCATACTGGTGCAC---ATA---ATATCTGTAAGCCTT---T-TTTTCTGTGAATTTGTACATTATCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343583 136 - 3123512 tgtatatatgtttataatatacaaatatttgtatatatttgtgtatatatatttatatatattatgtaAACTCCAAGTGCATACTGGTGCAC---ATA---ATATCTGTAAGCCTT---T-TTTTCTGTGAATTTGTACATTATCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7576960 133 - 10077455 tgtatatatgtttataatatacaaatatttgtatatatttgtgtatatatatttatatatattatgtaAACTCCAAGTGCATACTTGTGCAC---------ATATCTATAAGCCTT---T-TTTTCTGTGAATTTGTACATTATCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516634 136 - 127223203 tgtatatatgtttataatatacaaatatttgtatatatttgcggatatatatttttatatattatgtaaatTCCAAGTGCATACTTGTGCAC---ATA---GTATCTGTAAGCCTT---T-TTTTCTGTGAATGTGTACATTATCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632518 136 + 1799296 tgtatatatgtttataatatacaaatattggtatatatttgtgtatatagatttatatatattatgtaAACTCCAAGTGCATACTGGTGCAC---ATA---ATATCTGTAAGCCTT---T-TTTTCTGTGAATTTGTACATTATCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5183964 136 - 6934359 tgtatatatgtttataatatacaaatatttgtatatatttgcgtatatatatttatatatattatgtaAACACCAAGTGCATACTTGTGCAC---ATA---ATATCTGTAAGTCTT---T-TTTTCTGTGAAATTGTACATTATCA i colAng1.NW_012115910v1 C 0 I 991 s calJac3.chr8 20059470 136 + 128169293 tacatatatatttacagtatagaaatatttgtatatatttgtgtatgtatattcatatatatTTTGTAAACTCCAAGTGCATACGTGTGCAC---ATA---ATATCTGTAAGCCTT---T-TCACATATTAATTTGTACATTATCA i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 17644482 138 + 18371965 tGtatatatatatacagtatagacatatttgtatatatttgtgtat-tatattcatatatatTGTGTAAACTCCAAGTGCATATGTGTGCACATAATA---ATATCTCTAAGCCTT---T-TCACATATTGATTTTTGCATTATCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2179397 139 - 3566421 tatatatatatttacagtatagaaatatttgtatatatttgtgtatatatattcatatatatTGTGTAAACTCTAAGTGCATATGTGTGCACATAATG---GTATCTGTAAGGCTT---T-TCACATATTAATTTGTACGTTATCA i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 7378818 136 + 9267652 tatatatatatttacagtatagaaatatttatatatatttgtctatatatattcatttatatTGTGTAAACTCCAAGTGCATATGTGTGCAC---CTA---ATATCTGGAAGCCTT---T-TCACATATTAATTTGTACATTATCA i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 1596629 60 - 14340318 ------------------------------------------------ATATGAACACATA----------------------------------ATA---AAATTTGTAAGCCCTGCTT-TTTCCAATTAATCTGTGTATTACTA i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=151385.000000 s hg38.chr14_KI270725v1_random 114542 15 + 172810 GTTTGTTTTATAGAC---- s panTro5.chr1 126675942 15 + 228573443 gtttattttatagac---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675259 15 + 162613886 GTTTGTTTTATAGAC---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94735 15 + 126596 GTTTGTTTTATAGAC---- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5686026 15 + 72422247 gtttgttttaTGGAC---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44124041 15 - 99891981 gtttgttttaTAGAC---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350799 15 + 185818997 GTTTGTTTTATAGAT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996499 15 - 192294377 GTTTGTTTTATAGAT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343719 15 - 3123512 GTTTGTTTTATAGAT---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7577093 15 - 10077455 GTTTGTTTTATAGAT---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516770 15 - 127223203 GTTTGTTTTACAGAT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632654 15 + 1799296 GTTTGTTTTATAGAT---- i manLeu1.NW_012105809v1 C 0 C 0 s calJac3.chr8 20059606 15 + 128169293 GTTTGTTTTATAAAC---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17644620 15 + 18371965 GTTTGTTTTATAAAC---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2179536 15 - 3566421 GTTTGTTTTATAGAC---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7378954 15 + 9267652 GTTTGTTTTATAGAC---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1596689 19 - 14340318 ATTTTTTTTTCAAACAAAC i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e colAng1.NW_012115910v1 5184100 991 - 6934359 I a score=439110.000000 s hg38.chr14_KI270725v1_random 114557 40 + 172810 TCAAATAATTAAAGCTTCAAGGGAAAAATTTAAACTTTCC s panTro5.chr1 126675957 40 + 228573443 tcaaataattaaagcttcaagggaaaaatggaaactttcc i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675274 40 + 162613886 TCAAATAATTAAAGCTTCAAGGGAAAAATTTAAACTTTCC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94750 39 + 126596 TCAAATAATTAAAGCTTCAAGGGAAAAATTTAAACTTT-C i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5686041 40 + 72422247 TCAAATAATTAAAGCTTCAAGGGAAAAATTTAAACTTTCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44124056 40 - 99891981 TCAAATAATTAAAACTTCAAGGGAAAACTTTAAACTTTCC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350814 40 + 185818997 TCAAATAATTGAAGTTTTAAGGGAAAAATTGAAAGTTTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996514 40 - 192294377 TCAAATAATTGAAGTTTTAAGGGAAAAATTGAAAGTTTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343734 40 - 3123512 TCAAATAATTGAAGTTTTAAGGGAAAAATTGAAAGTTTCC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7577108 40 - 10077455 TCAAATAATTGAAGTTTCAAGGGAAAAATTGAAAGTTTCC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516785 40 - 127223203 TCAAACAATTGAAGTTTCAAGGGAAAAATTGAAAGTTTCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632669 40 + 1799296 TCAAATAATTGAAGTTTTAAGGGAAAAACTGAAAGTTTCC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5185091 40 - 6934359 TCAAATAATTGAAGTTTCAAGGGAAAAATTGAAAGTTTCT i colAng1.NW_012115910v1 I 991 C 0 s calJac3.chr8 20059621 40 + 128169293 GCAAATAATTGAAGCCTCAAGGGAAAAATTTAAACTTTCC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17644635 40 + 18371965 TGAGATAATTGAAGCCTCAAGGGAAAAATTTAAACTTTCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2179551 40 - 3566421 TCAGATAATTGAAGCCTCAAGGGAAAAATTTAAACTTTCC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7378969 40 + 9267652 TCAAATAATTGAAGCCTCAAGGGAAAAATTTAAACTTTCC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1596708 39 - 14340318 TCAAATTATCAAAACTATGGGGGAAAA-TTTAAACTTACC i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e canFam3.chr18 4083654 193 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=1274723.000000 s hg38.chr14_KI270725v1_random 114597 115 + 172810 TATAGAGAAAAGACAAATATATAGGTGACAAATAATATT---TAGAGTGTAAG-----------ACGCTTTTTAAAGGTATATTTGCAAATTGTGTCAAAACATTGAAATATACATTTGTTATTTTAAC s panTro5.chr1 126675997 115 + 228573443 tATAGAGAAAAGACAAATATATAGGTGACAAATAATATT---TAGAGTGTAAG-----------ACGCTTTTTAAAGGTATATTTGCAGTTTGTGTCAAAACATTTAAGTATACATTTGTTACCTTAAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675314 115 + 162613886 TATAGAGAAAAGACAAATATATAGGTGACAAATAATGTT---TAGAGTGTAAG-----------ACGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATATACATTTGTTATTTTAAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94789 115 + 126596 TACAGAGAAAAGACAAATATGTAGGTGACAAATAATATT---TAGAGTGTAAG-----------ACACTTTTTAAAGGTATATTTGCAATTTGTGTCAAGACATTTAAATATACATTTCTTATTTTAAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5686081 115 + 72422247 TATAGAGAAAAGACAAATATATATGTGACAAATAATATT---TAGAGTGTAAG-----------ACGATTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATACACATTTGTTACTTTAAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44124096 118 - 99891981 TATAGAGAAAAGACAAATATATATGTGAC----AATATT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATATACATTTGTTACTTTAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350854 118 + 185818997 TGTAGAGAAAAGACAAATTTATATATGACAAATAATACT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATACACATTTGTTACTT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996554 118 - 192294377 TGTAGAGAAAAGACAAATTTATATATGACAAATAATACT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATACACATTTGTTACTT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343774 118 - 3123512 TGTAGAGAAAAGACAAATTTATATATGACAAATAATACT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATACACATTTGTTACTT---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7577148 118 - 10077455 TGTAGAGAAAAGACAAATTTATATATGACAAATAATACT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATACACATTTGTTACTT---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516825 118 - 127223203 TGTAGAGAAAAGACAAATATATATATGACAAATAATACT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATATACATTTGTTACTT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632709 118 + 1799296 TGTAGAGAAAAGACAAATTTATATATGACAAATAATATT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTATATTTGCAATTTGTGTCAAAACATTTAAATACACATTTGTTACTT---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5185131 122 - 6934359 TGTAGAGAAAAGACAAATATATATATAACAAATAATACT---TAGAGTGTAAGTCGCT----GAAAGCTTTTTAAAGGTGTATTTGCAATTTGTGTCAAAACATTTAAATATACATTTGTTACTTTAAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059661 122 + 128169293 TATAGAGAAAAGACAAATGTATATATGACAAATAATATT---TAGAGTGTAAGTTGCT----GAAAACCTTATAAAGATACATTTGCAATTCATGTCaaaaaatttaaatatacatttgttactttaac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17644675 121 + 18371965 TATCTAGAAAAGACAAATATATATATGACAAATAATATT---TAGAGTGTAAGTTGCT----GAAAACCTTATAAAGATACATTTGCAATTTATGTCAAAAGACTTAAATGTA-ATTTGTTACTTTAAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2179591 119 - 3566421 TATACGGAAAAGACAAA--TATATATGACAAATAATATT---CAGAGTGTAAGTTGCT----GAAAACCTTATAAAGATACATTTGCAATTTATGTCAAAAAATGTAAATATA-ATTTGTTACTTTAAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7379009 122 + 9267652 TATAGAGAAAAGACAAATATGTATATGACAAATAATATT---TAGAGTGTAAGTTGCT----GAAAACCTTATAAAGATACATTTGCAATTTATGTCAAAAAATTTAAATATACATTTGTTACTTTAAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1596747 119 - 14340318 TCCAGAGTAAAAACAAATATATCTATAAGTAATTTTGTT---CAGAATACAAGTTACTGAAAGAAAGCTTTATAATAGTAGATTCACAATTTGCATCAAGCAATCTAAATATGCATTTATTG------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4083847 123 + 55844845 tatagagagaagacaga--catgtgggattaatatttctgcctagaatgtaaactgtt----gaaacctttatacagctatatttgcaatatgtagtaaaaactttgaatatgcatttatttccttaac i canFam3.chr18 I 193 C 0 e dasNov3.JH578441 254023 1605 - 1446996 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=274940.000000 s hg38.chr14_KI270725v1_random 114712 21 + 172810 TATAAAAT-----TTCAAATAATTTA s panTro5.chr1 126676112 21 + 228573443 TATAAAAT-----TTCAAATAATTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675429 21 + 162613886 TATAAAAT-----TTCAAATAATTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94904 20 + 126596 TATAAAAT-----TTAAAAT-ATTTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5686196 21 + 72422247 TATAAAAT-----TTCAAATAATTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44124214 21 - 99891981 TATAAAAT-----TTCAAATAATTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350972 21 + 185818997 TATAAAAT-----TTCAAATAATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996672 21 - 192294377 TATAAAAT-----TTCAAATAATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343892 21 - 3123512 TATAAAAT-----TTCAAATAATTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7577266 21 - 10077455 TATAAAAT-----TTCAAATAATTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516943 21 - 127223203 TATAAAAT-----TTCAAATAATTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632827 21 + 1799296 TATAAAAT-----TTCAAATAATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5185253 21 - 6934359 TATAAAAT-----TTCAAATAATTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059783 19 + 128169293 tataaaat-----ttcaaat--ttta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17644796 21 + 18371965 TATAAAAT-----TCCaaataattta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2179710 21 - 3566421 TATCAAAT-----TTCAAATAATTTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7379131 21 + 9267652 TATACAAT-----TTCAAATAATTTA i aotNan1.NW_018514471v1 C 0 I 149 s otoGar3.GL873564 1596866 19 - 14340318 TATGAAAT-----TTCAAATAACA-- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4083970 26 + 55844845 tatgaaatttatcttcaaataattta i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 255628 21 - 1446996 TAGAAAGT-----CTGTAGTAACTTA i dasNov3.JH578441 I 1605 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=-2022.000000 s hg38.chr14_KI270725v1_random 114733 3 + 172810 --AGC s panTro5.chr1 126676133 3 + 228573443 --AGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675450 3 + 162613886 --AGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94924 3 + 126596 --AGC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5686217 3 + 72422247 --AGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44124235 3 - 99891981 --AGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350993 3 + 185818997 --AGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996693 3 - 192294377 --AGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343913 3 - 3123512 --AGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7577287 3 - 10077455 --AGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516964 3 - 127223203 --AGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632848 3 + 1799296 --AGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5185274 3 - 6934359 --AGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059802 1 + 128169293 ----c i calJac3.chr8 C 0 I 102 s saiBol1.JH378145 17644817 1 + 18371965 ----c i saiBol1.JH378145 C 0 I 87 s cebCap1.NW_016107540v1 2179731 1 - 3566421 ----A i cebCap1.NW_016107540v1 C 0 I 83 s otoGar3.GL873564 1596885 3 - 14340318 --AGC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4083996 3 + 55844845 --tac i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 255649 3 - 1446996 TGA-- i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7379152 149 + 9267652 I a score=12986171.000000 s hg38.chr14_KI270725v1_random 114736 987 + 172810 CAAATACATAGT-ATA----TGCAGAAAATTTAGCAACATATCTATGTAGCACCTTACTGTGCATTACTGTAACCAGCCGTCTA---------ATATGAAGAATTAATTAAGGTAGCAGCTACTTTTCAAATAGCGCA----T--TTTTTT-GACAGACCTATTAAATAAGACCAATAACATTTAAACTTTATTTTTAAATTTGCAGAATAGTGGTTTTCAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCTTTTATGATTTCCAGCAGTTAACGGATAATATTTTACTGCTGAAACTACCATTTGTGATATAATTGCTCATTATGGGCCTTAAAACACAAGCAATATAATTATTTTCAACTTGGAGCAAATTAAAATCTTATCAGCAATTTAAAAA-CTCTTGAGTCGTCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGGAGAAGAACTCCAGCTGATTATGCTTTTTTTT-CTCTTC----CATCCACCTCGCAGGTGTGTTAATAATTTCATTTCCCAGAAAATGTTCTTTCATATCCATCTTACAAGATGAGAGACCTTTTAACATCTTCCATTCGGATGTGATACCAGTAA-TGGAAAATATTCCAGCTTCATGAATATGGTGATACAAATGGTTATCCGTCTAACCTCT-TTCAGTGCCAAATG-----TTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCTTCTGAAATCACTAATGAGAGGATCAGAGTTCTGGCTGTTGTCTG----------------------------TATCTCACATGACTTCCAGTGCAGACAATTGTTTCTATGCAGCACAG-ACAGTTGAAAGGATTGACTTCCTACCTAGAATAGTTTCTGCT------GTGCTTCT-TATCC-TTCTTGT---GGAGATTTCAGATTATCTGAATTGCTTTTCTATCTTAAG-AAAA------AACGCAA-------CAATTCTCCC----ACCTGAGAGGAATGCAAACTGTAGTAAGTTAGCAGAACCAAT s panTro5.chr1 126676136 987 + 228573443 CAAATACATAGT-ATG----TGCAGAAAA-TTAGCAATATATCTATGTAGCACCTTACTGTGCATTACTGTAAGCAGCCTTCTA---------ACATAAAGAACTAATTAAGGTAGCACCTACTTTTCAAATATCGCA----T--TTTTTC--ACAGACCTATTAAATAAGACAAATAACATTTAAACTTTATTTTTAAATTTGCAGAATAGTAGTTTTCAGCAGATGGTTTATTTTAGCAAATTCCGTCTTCACATTGTGCTATGCTTTTATGAGTTCCAGCTGTTAATGG---ATATTTTACTGCTGAAACTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAATTATTTTCAACTTGGAGCAAATTAAAATCTTATCAGCAATTTTAAAA-CTCTACAGTCGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGGAGAAGAACTCAAGCTGATTATTCTTTTTTTT-CTCTTC----CATCCACCTCGCAGGTGTGTTAATAATTTCATTTCTCAGAAAATGTTCTTTCATATCCATCTTACAAGATGAGAGACCTTTCAACATCTTCCATTCGGATGTCATACGAGTAA-TGGAACATATTCCAGCTTCATGAATATGGTGATACAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCTTCTGAAACCACTAATGAGAGGATCAGAGGTCTGGCTGTGGTCTG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTATGGAGCACAG-ACAGTTGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTGCT------GTGCTTCT-TATCC-TTCTTGT---GGAGATTTCAGATTATCTGAATTGCTTTTCTATCTTAAG-GAAA------AACGCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCAGAACCAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74675453 993 + 162613886 CAAATACATAGT-ATA----TGCAGAAAATTTGGCAATATATCTATGTAGCACCTTACTGTGCATTACTGTAACCAGCCGTCTA---------ATATAAAGAATTAATTAAGGAAGCAGCTACTTTTAAAATAGCGCA----T--TTTTTCCCACAGACCTATTAAATAAGACAAATAACATTTAAACTTTATTTTTAAATTTGCAGAATAGTAGTTTTCAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACGTTGTGCTATGCTTTTAGGAGATCCAGCTGTTAATGGATAATATTTTACTGCTGAAACTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACAAAAGCAATATAATTATTTTCAACTTGGAGCAAATTAAAATCTTATCAGCAATTTAAAAT-CTCTAGAGTCGTCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TA-T-TTTTAGTG-AGTTGCCTTATCAAGGAGAATAACTCAAGCTGATTACTCTTTTTTTT-CTCTTC----CATCCACCTCGCAGGTGTGATAATAATTTCATTTCTCAGAAAATGTTCTTTCATATCCGTCTTGCAAGATGAGAGACCTTTTAACATCTTCCATTCGTATGTGATACCAGTAA-TGGAAAATATTCCAGCTTCATGAATATGGTGATACAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAGTTACTCAGTTGACTGGAAATTTCTTCTGAAATCACTAATGAGAGGATCAGAGGTCTGGCTGTTGTCTG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTATGGAGCACAG-ACAGTTGAAAGGACTGACTTCCTGCCTAGAATAGTCTCTGCT------GTGCTTCT-TATCC-TTCTTGT---GGAGATTTCAGATTATCTGAATTGCTTTTCCATCTTAAG-AAAA------AACACAA-------CAATTCTCCC----ACCTGAGAGGAATGCAAACTGTAGTAAGCTAGCAGAACCAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 94927 988 + 126596 CAAATACATAGT-ATA----TGCAGAAAATTTAGCAATATATCTAT-TAGCACCTTACTGTGCATTACTGTAACCAGCCGTCTA---------ACATAAAGAATTAATTAAGATAGCAGCTACTTTTCAAATATCGCA----T--TTTTTT-CACAGACCTATTAAATAAGACAAATAACATTTAAACTTTATTTTTAAATTTGCAGAATAGTAGTTTTCAGCAGATGGTTTATTTTAGCAAATTCCGTCTTCACATTGTGCTATGCTTTCATGAGTTCCAGCTGTTAACGGATAATATTTTACTGCTGAAACTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAACAATATAATTATTTTCAACTTGGAGCAAATTAAAATCTTATCAGCAATTTAAAAT-CTCTAGAGTCGTCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGGAGAAG-ACTCAAGCTGATTATTCTTTTTTTT-CTCTTC----CATGCACCTCGCAGGTGTGTTAGTAATTTCATTTCTCAGAAAATGTTCTTTCATATCCATCCTACAAG-TGAGAGACATTTTAACATCTTCCATTCGGATGTGATACCAGCAA-TGGAAAATATTCCAGCTTCATGAATATAGTGATACAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAGTTATTCAGTTGACTGGTAATTT-TTCTGAAATCACTAATGACAGGATCAGAGGTCTGGCTGTTGTCTG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTATGGAGCACAG-ACAGTTGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTGCT------GTGCTTCT-TATCC-TTCTTGT---GGAGATTTCAGATTATCTGAATTGCTTTTCTATCTTAAG-AAAA------AACGCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGCAAGTTAGCAGAACCAAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5686220 992 + 72422247 TAAATACATAGT-ATA----TGCCAAAAATTTAGCAATATTTGTATGTAGCACCTTACTGTGCATTACTGTAACCAACTGACTA---------ATATAAAGAACTAATTAAGGTAGCACCTACTTTTCAAATATCTCA----T--TTTTTT-CACAGACCTATTAAATAAGACAAATAACATTTAAACTTTATTTTTAAATTTGCAGAATAGTATTTTTCAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCTTTTATGAGTTCCAGCTGTTAACGGATAATATTTTACTGCTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTTGGAGAAAATTAAAATCTTATCAGCAATTTAAAAA-CTCTAGAGTTGTCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGGAAAAGAACTCAAGCTGATTATTCTTTTTTTT-CTCTTC----CATCCACCTCGCAGGTGTGTTAATAATTTCATTTCTCAGAAAATGTTCTTTCATAGCCATCTTACAAGATGACAGAACTTTTAACATCTTCCATTCGGATGTGATACCAGTAA-CGGAAAATATTCCAGCTTCATGAATATGGTGATACAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTTAATTACTCACTTGACTGGTAATTTCTTCTGAAATCACTAATGAGAGGATCAGAGATCTGGCTGTTGTCTG----------------------------TACTGCATATGACTCCCAGTGCAGACAATTGTTTCTAAGGAGCACAG-ACAGTTGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTGCT------GTGCTTCT-TATCC-TTCTTGT---GGAGATTTCAGAGAATCTGAATTGCTTTTCTATCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCAGAGGCAAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44124238 985 - 99891981 TAAATACATATT-ATA----TACAGAAAATTTAGCAATATTTGTATGTAGCACCTTACTGTGCATTACTGTAACCAACTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTACATTTCAAATATCTCA----T--TTTTTT-CACAGACCTATTAAATAAGACAAATAACATTTAAACTTTATTTTTAAATTTGCAGAATAATATTTTTCAGCAGATGGCTTATTTTAGCAAATTACATCTTCACATTGTGCTATGCTTTTATGAGTTCCAGCTGTTAACAGATAATATTTTACTGCTGAATCTATCATGTGTGATATAATTGCTCATAATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTTGGAGCAAATTAAAATCTTATCAGCAATTTAAAAA-ATCTAGAGTTGTCTTC-TTCTGGTTAATTATTTTAAACTTTTATTTTTCTCTTTA------GG-T-TTTTAGTG-AGTTGTCTTATCAAGGAGAAGAATTCAAGCTGACTATTCTTTTTTTT-CTCTTC----CATCCACCTTGCAGGTGTGTTAATAATTTCATTTCTCAGAAAATGTTCTTTCATATCCATCTTACAAGATGAGAGATCTTTTAACATCTTCCATTCAGATGTGATAACAGTAA-TGGAAAATATTCCAGCTTCATGAATATGGTGATACAAATAGTTATCCATCTAACCTCT-TTCAGTGCAAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCTTCTGAAATCACAGATGAGAGGATCAGAGGTCTGCCTGTTGTCTG----------------------------TACCTCGTATGACTCCCAGTGCAGACAATTGTTTCTATGGAGCATAG-AC-------AGAATTGACTTCCTGCCTAGAATAGTTTCTGCT------GTGCATCT-TACCC-TTCTTGT---GGAGATTTCAGATTATCTGAATTGCTTTTCTATCTTAAG-AAAA------AACTCAA-------CAGTTCTCCC----ACCTGAGAGGAATGTAAACTGCAGTAAGTTAGCAGAAGCAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52350996 993 + 185818997 TAAATACACAAT-ATA----TACAGAAAATTTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAAGTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATCTCA----T--TTTTTT-CACAGGCCTATTAAATAATACAAATAACATTTTAACTTTATTTTTAAATTTGCAGAATAATAATTTTTAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTATGAGTTCCAGCTGTTAACAGATAATATTTTACCACTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTTGGAGCAAATTAAAATCTTACCAGCAATTAAAAAA-ATCTAGAGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAAGTACTCAAGCTGATTATTCTTTTTTTTCCTCTTC----CATCCACCTTGCAGGTGTGTCAATAATTTCATTTCTCAGAAAATATTCTTTCATATCCATCTTACAAGATGAGAGGCCTTTTAACATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGATGCAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCGTCTGGAGTCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATATGACTCCCAATGCAGACAATTGTTTCTGTGGAGCACAG-ACAGTCGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTACT------GTGCTTCT-TATCC-TGCTTGT---AGAGATTTCAGATTCTCTGAATTGCTTTTCTGTCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124996696 993 - 192294377 TAAATACACAAT-ATA----TACAGAAAATTTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAAGTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATCTCA----T--TTTTTT-CACAGGCCTATTAAATAATACAAATAACATTTTAACTTTATTTTTAAATTTGCAGAATAATAATTTTTAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTATGAGTTCCAGCTGTTAACAGATAATATTTTACCACTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTTGGAGCAAATTAAAATCTTACCAGCAATTAAAAAA-ATCTAGAGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAAGAACTCAAGCTGATTATTCTTTTTTTTCCTCTTC----CATCCACCTTGCAGGTGTGTCAATAATTTCATTTCTCAGAAAATATTCTTTCATATCCATCTTACAAGATGAGAGGCCTTTTAACATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGATGCAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCGTCTGGAGTCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTGTGGAGCACAG-ACAGTCGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTACT------GTGCTTCT-TATCC-TGCTTGT---AGAGATTTCAGATTCTCTGAATTGCTTTTCTGTCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 343916 993 - 3123512 TAAATACACAAT-ATA----TACAGAAAATTTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAAGTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATCTCA----T--TTTTTT-CACAGGCCTATTAAATAATACAAATAACATTTTAACTTTATTTTTAAATTTGCAGAATAATAATTTTTGGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTATGAGTTCCAGCTGTTAACAGATAATATTTTACCACTGAATCTATCATGTGTGATGTAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTTGGAGCAAATTAAAATCTTACCAGCAATTAAAAAA-ATCTAGAGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAAGAACTCAAGCTGATTATTCTTTTTTTTCCTCTTC----CATCCACCTTGCAGGTGTGTCAATAATTTCATTTCTCAGAAAATATTCTTTCATATCCATCTTACAAGATGAGAGGCCTTTTAACATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGATGCAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGATAATTTCGTCTGGAGTCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTGTGGAGCACAG-ACAGTCGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTACT------GTGCTTCT-TATCC-TGCTTGT---AGAGATTTCAGATTCTCTGAATTGCTTTTCTGTCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7577290 993 - 10077455 TAAATACACAAT-ATA----TACAGAAAATTTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAAGTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATCTCA----T--TTTTTT-CACAGGCCTATTAAATAATACAAATAACATTTTAACTTTATTTTTAAATTTGCAGAATAATAATTTTTAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTATGAGTTCCAGCTGTTAACAGATAATATTTTACCACTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTCGGAGCAAATTAAAATCTTACCAGCAATTAAAAAA-ATCTAGAGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAAGAACTCAAGCTGATTATTCTTTTTTTTCCTCTTC----CATCCACCTTGCAGGTGTGTTAATAATTTCATTTCTCAGAAAATATTCTTTCATATCCATCTTACAAGATGAGAGGCCTTTTAACATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGATGCAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCGTCTGCAGTCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTGTGGAGCACAG-ACAGTCGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTACT------GTGCTTCT-TATCC-TGCTTGT---AGAGATTTCAGATTCTCTGAATTGCTTTTCTGTCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121516967 993 - 127223203 TAAATACACAAT-ATA----TACAGAAAATGTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAACTGTCTA---------ACATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATCTCA----T--TTTTTT-CACAGGCCTATTAAATAAGACAAATAACATTTTAACTTTATTTTTAAATTTGCAGAATAATATTTTTCAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTATGAGTTCCAGCTGTTAACGGATAATATTTTACCACTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATGTAGTTATTTTCAACTTGGAGCAAATTAAAATCTTACCGGCAATTAAAAAA-ATCTAGAGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAAGAACTCAAGCTGATTATTCTTTTTTTT-CTCTTC----CATCCACCTTGCAGGTGTGTTAATAATCTCATTTCTCAAAAAATATTCTTTCATATCCATCTTAAAAGATGAGAGGCCTTTTAACATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGATGCAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCTGTTGACTGGTAATTTCGTCTGGAGTCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATACGACTCCCAGTGCAGACAATTGTTTCCATGGCGCACAG-ACAGTCGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTACT------GTGCTTCT-TATCC-TGCTTGT---GGAGATTTCAGATTCTCTGAATTGCTTTTCTGTCTTAAGAAAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 632851 993 + 1799296 TAAATACACAAT-ATA----TACAGAAAATTTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAGGTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATCTCA----T--TTTTTT-CACAGGCCTATTAAATAAGACAAATAACATTTTACTTTTACTTTTAAATTTGCAGAATAATATTTTTTAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTATGAGTTCCAGCTGTTAACAGATAATATTTTACCACTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTCGGAGCAAATTAAAATCTTACCAGCAATTAAAAAA-ATCTAGAGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAAGAACTCAAGCTGATTATTCTTTTTTTTCCTCTTC----CATCCACCTTGCAGGTGTGTTAATAATTTCATTTCTCAGAAAATATTCTTTCATATCCATCTTACAAGATGAGAGGCCTTTTAACATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGATGCAAATAGTTATCCGTCTAACCTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCGTCTGGAGTCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTGTGGAGCACAG-ACAGTCGAAAGGATTGACTTCCTGCCTAGAATAGTTTCTACT------GTGCTTCT-TATCC-TGCTTGT---AGCGATTTCAGATTCTCTGAATTGCTTTTCTGTCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5185277 986 - 6934359 TAAATACACAAT-ATA----TACAGAATATTTAGCAATATTTGTATGTAGCACCTTACAGTGCATTACTGTAACCAACTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTCCTTTTCAAATATTTCG----T--TTTTTT-CACAGGCATATTAAATAAGACAAATAACATTTTAACTTTATTTTTAAATTTGCAGAATAATATTTTTCAGCAGATGGTTTATTTTAGCAAATTCCATCTTCACATTGTGCTATGCCTTTTTGAGTTCCAGCTGTTAACGGATAATATTTTACCACCGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCAACTTGGAGCAAATTAAAATCTTACCGGCAATTAAAAAA-ATCT--AGTTGCCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTTGTCTTATCAAGAAGAATAACTCAAGCTGATTATTCTTTTTTTC-CTCTTC----CATCCACCTTGCAGGTGTGTTAATAATTTCATTTCTCAGAAAATATTCTCTCATATCCATCTTACAAGATGAGAGGCCTTTTAACAACTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATGGTGAGGCAAATAGTTATCCGTCTAACTTCT-TTCAGTGCCAAATGTTTACTTTACTC-AGTGAATTACTCAGTTGACTGGTAATTTCGTCTGGAGTCACAAACGAGAGGATCAGAGGTTTGGCTGTTGTCCG----------------------------TACCTCATATGACTCCCAGTGCAGACAATTGTTTCTATGGAGC-----ACAGTCAAAAGGATTAACTTCCTGCCTTGAATAGTTTCTACT------GTGCTTCT-TATTC-TGCTTGT---GGAGATTTCAGATTATCTGAATTGCTTTTCTGTCTTAAG-AAAA------AACTCAA-------CAATTCTCCC----ACCTGAGAGGAATGTAAACTGTAGTAAGTTAGCTGAAGCAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20059905 973 + 128169293 CAAATACACAAT-ATA----TACAGAATATTTGGAAATATTTATATGTAGCAC----CTGTGAATTATTATAACCAACTGTCTA---------ATATAAGGAACTGATTAAGGTAGCACCTACTTTTCGAATATGTCA----T--GTTTTT-CATAGACCTGTTAAATAAGGCAAATAACGTTTTAACTCTATTTTTAAATTTGCAGAATAGTATTTTTCAGCAGATGG-TTATTTTAGCAAATTTCATCTTCACATTGTGCTATGCTTTTATGAGTTCCAGCTGTTAACGAATAATATTTTACTGCTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCATCTTGGAGCAAATTAAAATCTTATCAGCAATTTAAAAA-ATCTAGAGTTGTCTTC-TGC-------TTATTTTAATATTGTATTTTTCTCTTTA------TG-T-TTTTAGTG-AGTGGTCTTATCAAGAAGA---GCTCAAGCTGATTATTCTTTTTCTC-CTCCTC----CAG----CTTGCAGGTGTGTTAATAATTTCATTTCTGAGAAAATGTTCTTTTCTATCCATTTTACAAGATGAGAGACCTTTTAAGATCTTCCATTCAGAAGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATAGTGATACAAATAGTTATCTGTCTACCCTCT-TTCAGTGCCAAATGTTTGCTTTACTC-AATGAATTACTCAGTTGACTGGAAATTTGTTCTGCAATCACAAATGAGAGGATCAGAACTTTGGCTGTTGTCTG----------------------------TACCTCGTATGACTCCCAGTGCAGGAAGTTGTTTCTATGGAGCACAG-ACAGTTGAAGGGATTGACTTCCTGCCTAGAATGGTTTCTGCT------GCGCTTCT-TATCC-TGCTTGT---GGAGATCTCAGCTTATCTGAATTACTTTTCTGTCTTAAG-CAAA------ATCTCAA-------TGATTCTCCC----ATCTGAGAGGAATGTAAAATGTAATAAGTTAGTTGTAGGAAT i calJac3.chr8 I 102 C 0 s saiBol1.JH378145 17644905 974 + 18371965 CAAATCCACAAA-ATA----TACAGAAAATTTGGCAGTGTTTATATGTAGCACCTTACTGTGAATTACTATAACCAACTGTCTA---------ATATAAAGAACTAATTAAGGTAGCAACTACTTTTCAAATATGTCC----T--TTTTTT-CATAGACCTGTTAACTAAGGCAAATAACGTTTTAACTTTATCTTTAAATTTGCAGAATAGTATTTTTCAGCAGATGGTTTATTTTAGCAAATTTCATCTTCACGTTGTGGTATGCGTTTATGAGTTCCAGCTGTTAACGGATAATATTTTACTCCTGAATCTATCATGTGTGATATCATTGCTCATTGTGTGCCTTAAAACACAAGCAATATAGTTATTTTCATCTTGGAGCAAATTAAAATCTT---AGCAATTAAAAAA-ATCTAGAGTTGTCTTC-TTCTGCTTAATTATTTTAATCTTGTATTTTTCTCTTTA------TG-C-TTTTAGTG-AGTAGTCTTATCAAGAAGA---GCTCGAGCTGATTATTCTTTTTCTC-CTCCTC----CATACACCTTGCAGGTGTGCTAATAATTTCATTTCTGAGAAAATGTTCTTTCCTATCTACTTTACAAGTTGAGAGACCTTTTAAGATCTTCCATTCAGATGTGATACCAATAG-TGGAAAATATTCCAGCTTCATGAACATAGTGATACAAATAGTTATCTGTCTAACCTCT-TTCAGTGCCAAATGTTTGCTGTACTC-AATGAATTACTCAGTTGACTGGAAATTTGTTCTGCAATCACAAATGAGAGGATCAGGGGCTTGGCTGTTGTCTG----------------------------TACCTCGTATGACTCCCAGTGCAGGAAATTGTTTCTGTGGAGCATAG-ACAGTGGAAGGGATTGACTTCCTGCCTAGAATAGTTTCTTC------------------TCC-TGCTTGT---GAAGATCTCAGCTTATCCGAATTACTTTTCTGTCTTAAG-CAAA------ATCTCAA-------TGATTCTCCC----ATCTGAGCGGAATGTAAAATGTAGTAAGTT-GTTGTGGGAAT i saiBol1.JH378145 I 87 C 0 s cebCap1.NW_016107540v1 2179815 976 - 3566421 CAAATACACAAT-ATA----TACAGAAAATTTGGCAGTATTTATATGTAGCACCTTGCTGTGAATTACTGTAACC-ACTGTCTA---------ATATAAAAAAC----TAAGTTAGCACCTACTTTTCAAATATGTCA----T--TTTTTT-CATAGACCTGTTAAATAAGGCAAATCACATTTTAACTTTATTTTTAAATTTGCAGAATAGTATATTTCAGCAGCTGGTTTATTTTAGCAAATTTCATCTTCACATTGTGG--------TATGAGTTCTAGCTGTTAACGGATAATATCTTACTGCTGAATCTATCGTGTGGGATATCATTGCTCATTATATGCCTTAAAACACAAGCAATAGAGTTATTTTCATCTTGGAGCAAATTGAAATCTTATCAGCAATTTAAAAA-ATCTAGAGTTGTCTTC-TTCTGCTTAAttattttaatcttgtatttttctcttta------tg-t-ttTTAGTG-AGTAGTCTTATCAAGAAGA---GCTCAAGCTGATTATTCTTTTTCTC-CTCCTC----CATACACCTTGCAGGTGTGTTAATAATTTCATTTCTGAGAAAATGTTCTTTCCTATCCATTTTACAGGATGAGAGACCTTTTAAGATCTTCCATTCAGATGTGATACCAGCAG-TGGAAAATATTCCAGCTTCATGAATATAGCGATACAAATAGTTATCTGTCTAACCTCT-TTCAATGCCAAATGTTTGCTTTACTC-AGTGAATTACTCAGTTGACTGGAAATTTGTTCTGCAATCACAAATGAGAGGATCAGAGGTTTGGCTGTTGTCTG----------------------------TACCTCGTATGACTCCCAGTGCAGGAAATTGTTTCTACGGAGCATAC-ACAGTTAACGGGATTGACTTCCTGCCTAGAATAGTTTCTGCT------GTGCTTCT-TATCC-TGCTTGT---GGAGATCTCAGCTTATCTCAATGACTTTTCTGTCTTAAG-CAAA------ATCTCAA-------TGATTCTCCC----ATTTGAGAGGAATGTAAAATGCAATAAGTTAGTTGTAGGAAT i cebCap1.NW_016107540v1 I 83 C 0 s aotNan1.NW_018514471v1 7379301 984 + 9267652 CAAATACACAAT-ATA----TACAGAAAATTTGGCAGTATTTATATGTAGCACCTTACTGTGAATTACTGTAACCAACTGTCTA---------ATATAAAGAACTAATTAAGGTAGCACCTACTTTTCAAATATGTCA----T--TTTTTT-CATAGACCTGTTAAATAAGGCAAATAGTGTTTTAACTTTATTTTTAAATTTGCAGAATAGTATTTTTCAGCAGATGGTTTATTTTAGCAAATTTCATCTTCACATTGTGCTATGCTTTTATGAGTTCCAGCTGTTAACGGATAATATTTTACTGCTGAATCTATCATGTGTGATATAATTGCTCATTATGTGCCTTAAAACACAAGCAATATAGTTATTTTCATCTTGGAGCAAATTAAAATCTTATCAGCAATTAAAAAA-ATCTAGAGTTGTCTTC-TGC---TTAATTATTTTAATCTTGTATTTTTCTC--TA------TG-T-TTTTAGTG-AGTAGTCTTATCAAGAAGA---GCTCAAGCTGATTATTCTTTTTCTC-CTCCTC----CATACACCTTGTAGGTGTGTTAATAAATTAATTTCTGAGAAAATGTTCTTTCCTATCCATTTTACAAGATAAGAGACCTTTTAAGATCTTCCATTCAGATGTGATACCAGTAG-TGGAAAATATTCCAGCTTCATGAATATAGTGATACAAATAGTTATCTGTCTAACGTCT-TTCAGTGCCAAATGTTTGCTTTATTC-AATGAATTACTCGGTTGACTGGAAATTTGTTCTGCAATCACAAATGAGAGGATCAGAGGTTTGGCTGTTTTCTG----------------------------TACCTCGTATGACTCCCAGTGCAGGAAATTGTTTCTATGGAGCATGG-ACAGTTGAAGGGATTGACTTCCTGCCTAGAATAGTTACTGCT------GTGCTTCT-TATCC-TGCTTGT---GGAGATCTCAGCTTATCTGAATTACTTTTCTGTCTTAAG-CAAA------AGCTCAA-------TGATTCTCCC----ATCTGAGAGCAATGTAAAATGTAATAAGTTAGTAGTAGGAAT i aotNan1.NW_018514471v1 I 149 I 17 s otoGar3.GL873564 1596888 943 - 14340318 TAACTATATGAT-CTA----TATGGAAAATTTAGCAATACTTACATGGAGCCCCTTATTGTG-----CTATAACAAACTGTCAA---------ATGTAGTAAA-TAATTAAGGTAACACTTAC-TTAAAAATATCTCA----T--CATTTT-CACAGATCTATTAAATAAGGCAAATAACATTTTAAC------TTTAAATTTACAGAATAGTATTTTTCAGCAGATGGTCT-TTCTTGTCAATTCCATGTTCACATGATGTTATGC-TTTATGAGTTCCAACTGTTAATTGATAATATTTTACTGC-GAATTTATCACGTGTGATATAATTGCTCATTATGTGCCGTAAAACACCAGCAATATAGTTATTTTCAACTTGCAACAAATTAAAATCTTATCAGCATTTTAAAAA---CTACATTTGTCTTCTTTCTGGCTAATTATTTTAAACTTACATTTTTCTCTGAAAAAAATTT-T-TTTTAGAG-AATTG-----TCAAGAGAACAAATTCAAGCTGATTATCTTTTTGTCT-CTC-TC----CATATACCTTGCAAGTGTGT---TAATTTCATTTCTGAG---ATGTTCTCTCATATCCATCTTAGAAGATGAGAAGACTTGTAAGTTCCTTTATTTGGTTATGATACCAGTAG-TAGAAAATATTTCAACTCCATGAACATGGTGGTGGAAATGATTATCACTCTAACCCCGAATTAGTGCTAAATATTTGGTGTTCTC-AGTGAATTACTGAGTTGACTAAAACTTTCTTCTGAAATTCCAAGAGAGCAA------------------GTCTG----------------------------TGCTCTGTGTGACTCCCAGCATGGATGGTGGTTTCTACGGGAC-----ACAGCTGAATGGACTGACTTCACGCCCAGACTAGTTTCTTCT------GGGTCT-T-AATCT-TGTGTGT---GGAGAGCCCAAAAAATTTGCATCAC-TCTCTTTCTTA---AAAA------TATTCAA-------CAAGTCTTCA----ACCTGAGTGGAATATAAA-TGTAATGAGTAAGTTGAAGCAAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4083999 1001 + 55844845 tgaaTGCACAAT-ATACATGTATGAGGAATTTAGCAATAATTATATGCAGCTCCACACTGTACACTACTGTAACCAATTGTGTA---------ATACAGGAAATTAATTAAAGTAGCACCTACTTTTC-ATTATCTCATCATT--TTTTTT-CACAAATCTATTAAATAAGGCAAATAATGTTTTAACTTTATTTTT-AATTTGCAGAATACTATTTTTCAGCAGATGGTTTATTCTAACAAACTTCATGTTCACACTGTGCTATGCTTTTATGAGTTCCAGCTGTTAACTGATAATATTTCACTGCTGAATCTATGATGTGTGATATAATTGCTCATTATGGGCCTTAAAACACCAGTAATATAGTTATTTTCAACTTCGAGCAAATTAAAATCTTATCAGCATTTTAAAAAAATCTACAGTTGTCTTC-TTCTGGTTAATTATTTTAAACTTGTGTTTTTCTCTGTA------TATT-TTTTAATGTTATTATTTTGTGAAGACTAAAAATTCAGGCTGATTATTGCTTCCCCT-CCCTACCCCGCCTTCAATTTGCAGGTGGGTTAATAGTTCCATTTCTGAGGAAATAATCTTTCCTATCTGGCTTACCAGCTGAGA-ATCCTTTAAGTTCTTCTAGT-AGATATAATAGCAGTAG-TGGCAA--AATCCAACTTCATGGATACTGTGAAACAAATGGATCTCTCTCAAGC-----TCTATTGGCAAATGTTTGGTGTATTCAAGAGCATGACTCAGTTGACTGGT--CTTTTTCTGAAATTCCAAATGGTAGACT------TTGGGCTATTTTCTG----------------------------TA---------ACTCCAAGTGTAGACCATCGTGTCTTTGGAGCACAGAAGAGTTGAAAGCATTGACTTCATGTTTAGACTAGTTTCTGCCCAGAGAGTGCTCTG-TGTCCACTCTTGTCTGACAGATCGCAGATAATCTGGATTACTTTTCTGTTTTAAG-AAAAACAAACACCTCAA-------CAAGTCTCTTTCTAAGCTGATAGAAATATAAAATGTA-CGAGTTAGTTGAAGGAAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 255652 1002 - 1446996 TAAATATGCAAGAATG----TATAGAAAATTTAGCAATATTAATATTCATTACCTTATTTTACATTACAGTAAAATATTTTCTATAACTATCTACTTAAGGAATTAATTGAGGTCACATCTACTTTTC-AACATCTCA----TCATTTTAT-CCAAGATCTATTAAATAAGGCAAATCACATTTTAGCTTTATTTTTAAATTTGCGGAATAGTATTTTTCAGCAGATGGTTTATTCTAGCGAATCCCATGTTCATAGTGAGCTATGCTTTTATGAGTTCCAGCTGTTAACTGATAATATTTCACTACTGAATCTATCATGCATAATATAATTGCTCATTATGTGCCTTAAAACACCAACAATATAGTTATTTTTGTCTTGGAGCAAATTAAAATCTTATCAGCA-TTTAAAAA-ATCTACAGTTGTCTTC-TTCTGGTTAATTATTTTAAACTTGTATTTTGCTCTGTA------TA-TATTTTAGTG-AGTTGTATTGTCAAGAGGAAGAACTGAAGCTGATTATTCTTTTAGATATTTCTC----CATTTACCTTGCAGGTGTGA-GATAAGTTCATTTT--GAGGAATGTTTTTTCCTATCTGATTTACAAGGTGAGAAGATTTTTTTCAG-TTCTATTCAGCTGTGAAAGAAATAGCTGCAAAATAGTCTACCTTCATAGATATTGTGATATA---------------------T-GCTAGAGCT-AACATCTGGTGAACTT-AATGGATTTCTCAGTTGATTGTTA-CTTGTACTTAAATTCCAAATAAGAGTATTTGGTCTTAGGCTATTTTCTGCTCTGTAGCTCCAGTGATCATTGAGTGTTACTTCATGATAGGCCAAGTGTGGGCAACTTTGTCTGTGGCTCATAG-AAAGGTGAATGGATGAACC------------AAGCGAGTGTT------GTGTTCATGGGTGT-TATCTGT---GGAGGTCTCAGAAAATGTGTATCATTTTCTTGTCATGAG-GAAA------AAAAAAAACAAACCTAAGTTTCCT----ACCTGAAAGAAATGTGAAATGCAAGGAGCTAGTTGAAGCAAA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=153780.000000 s hg38.chr14_KI270725v1_random 115723 19 + 172810 CCGTAAAGCTTTTACATTG s panTro5.chr1 126677123 19 + 228573443 CCGTAAAGTTTTTACATTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676446 19 + 162613886 CCGTAAAATTTTTACATTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 95915 19 + 126596 CTGTAAAGTTTTTACATTG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687212 19 + 72422247 CCGTAAAGATTTTACATTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125223 19 - 99891981 CTGTAAAGTTTTTACATTG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52351989 19 + 185818997 CTGTAAAGTTCTTACATTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124997689 19 - 192294377 CTGTAAAGTTCTTACATTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 344909 19 - 3123512 CTGTAAAGTTCTTACATTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578283 19 - 10077455 CCGTAAAGTTCTTACATTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121517960 19 - 127223203 CCATAAAGTTCTTACATTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 633844 19 + 1799296 CCGTAAAGTTCTTACATTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186263 19 - 6934359 CCGTAAAGTTCTTACACTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20060878 15 + 128169293 -TGTAAAGTTCCTACA--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17645879 15 + 18371965 -TGTAAAGTTCCTACA--- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2180791 15 - 3566421 -TGTGAAGTTCCTACA--- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1597831 8 - 14340318 -----------TCACAATG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4085000 19 + 55844845 CCATAATGCTTCTGTAAAG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 256654 19 - 1446996 CCATAATGCCCTTATAAAA i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380285 17 + 9267652 I a score=358894.000000 s hg38.chr14_KI270725v1_random 115742 36 + 172810 TTT--GTTGCAAAATGCAG--CGCTGGTGTCTCCATCACT s panTro5.chr1 126677142 36 + 228573443 TTT--GTTGCAAAATGCAG--CGCTGGTGTCTCCATCACT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676465 36 + 162613886 TTT--GTTGCAAAATGCAG--CGCTGGTGTCTCCATCACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 95934 36 + 126596 TTT--GTTGCAAAATGCAG--CGCTGGTGTCTCCATCACT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687231 36 + 72422247 TTT--GTTGTAAAATGCAG--CGTTGGTGTCTCCATCACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125242 36 - 99891981 TTT--GTTGTAAAATGCAG--CTTTGGTTTCTCCATCACT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52352008 36 + 185818997 TTT--GTTGTAAAATGCAG--TGTTGCTGTCTCCATCACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124997708 36 - 192294377 TTT--GTTGTAAAATGCAG--TGTTGCTGTCTCCATCACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 344928 36 - 3123512 TTT--GTTGTAAAATGCAG--TGTTGCTGTCTCCATCACT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578302 36 - 10077455 TTT--GTTGTAAAATGCAG--TGTTGCTGTCTCCATCACT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121517979 36 - 127223203 TTT--GTTGTAAAATGCAG--CGTTGCTGTCTCCATCACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 633863 36 + 1799296 TTT--GTTGTAAAATGCAG--TGTTGCTGTCTCCATCACT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186282 36 - 6934359 TTT--GTTGTAAAATGCAG--TGTTGCAGTCTCCATCACT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20060893 35 + 128169293 -TT--GTTGTAAAACACAG--CACTGGTGTCTACACAACT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17645894 35 + 18371965 -TT--GTTGTAAAATGCAG--CATTGGTGTCTACACAACT i saiBol1.JH378145 C 0 I 322 s cebCap1.NW_016107540v1 2180806 35 - 3566421 -TT--GTTGTAAAATGCAG--CATTGGTGTCTACACAACT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7380302 33 + 9267652 -----TTTGTAAAATGCAG--CATTGGTGTCGACACAACT i aotNan1.NW_018514471v1 I 17 C 0 s otoGar3.GL873564 1597839 21 - 14340318 -----------------TG--TGTCAGCATTCCCACCGCT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4085019 40 + 55844845 TTTAAGTTCTACAATACAGGATTTTGATGTCTCCACTACT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 256673 31 - 1446996 TTT--ATGACCTAAAACA---TTTTGGTGTTCCCCT---- i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=2078960.000000 s hg38.chr14_KI270725v1_random 115778 187 + 172810 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCTGTATTCCCGAGACAGAGTGCCCTTTTGGTGAGCTATAAGCACACTCAAT----GGTAGGCTGAAATACTAGCTTTTATCTATGGCGAAATGGAATCATATCAGTGATTTTTTT-------AAAAAGGAAATTTAACT s panTro5.chr1 126677178 186 + 228573443 AACCTTTTCTATCCCTCATTG--CTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCTGTATTCCTGAGACAGAGTGCCCTTTTGGTGAGCTATAAGTACACTCAAT----GGTAGGCTGAAATACTAGCTTTTATCTATGGCGAAATGGAATCATATCAGTGATTTTTTTA------AAAAAGGAAATTTAACT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676501 187 + 162613886 AACCTTTTCTATCCCTCGTTGCTCTTTC-TTTGA-CTGCACTAGGATACCTCTAGGCAAATCTGTATTCCCGAGACAGAGTGCCCTTTTGGTGAGCTATAAGCACACTCAAT----GTTAGGCTGAAATACTAGCTTTTATCTATGGCGAAATGGAATCATATCAGTGATTTTTTT-------AAAAAGGAAATTTAACT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 95970 186 + 126596 ACCATTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCTGTATTCCCAAGACAGAGTGCCCTTTTGGTGAGCTATAAGCACACTCAAT----GGTAGGCTGAAATACTAGCTTTTATCTATGGCGAAATGGAATCATATCAGTGATTTTTTT--------AAAAGGAAATTTAACT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687267 187 + 72422247 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCTGTATTCCCGAGACAGAGTGCCCTTTTGGTTAGCTATAAGTACACTCAAT----GGTAGACTGAAATATTAGTTTTTATCTATGGCGAAATGGAATCATATCAGTGATTTTTTT-------AAAAAGGAAATGTAACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125278 186 - 99891981 AAATTTTTCTATCCCTCATTGCTTTTTC-TTTGA-CTGTGATAGGATACCTCTAGGCAAATCTGTATTCCCGAGACAGAGTGCCCTTTTGGTTAGCTATAAGTACACTCAAT----GGTAGGCTGAAATATTAGTTTTTATCTACGGTGAAATTGAATCATATCAGTTATTTTTTT--------AAAAGGAAATTTAACT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52352044 186 + 185818997 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCCATATTCCCGAGACTGAGTGCCCTGTGGGTTAGCTATAAGTACACTCAGT----GGTAGGTTGAAGTATTAGTTTTTATCTATGGCGAAATGGAATCACATCAGTGATTTTTTT-------T-AATGGAAATTTAACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124997744 187 - 192294377 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCCATATTCCCGAGACTGAGTGCCCTGTGGGTTAGCTATAAGTACACTCAGT----GGTAGGTTGAAGTATTAGTTTTTATCTATGGCGAAATGGAATCACATCAGTGATTTTTTT-------TAAATGGAAATTTAACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 344964 187 - 3123512 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCAATAGGATACCTCTAGGCAAATCCATATTCCCGAGACTGAGTGCCCTGTGGGTTAGCTATAAGTACACTCAGT----GGTAGGTTGAAGTATTAGTTTTTATCTATGGCAAAATGGAATCACATCAGTGATTTTTTT-------TAAATGGAAATTTAACT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578338 187 - 10077455 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCTATAGGATACCTCTAGGCAAATCCATATTCCCGAGACAGAGTGCCCTGTGGGTTAGCTATAAGTACACTCAGG----GGTAGGTTGAAGTATTAGTTTTTATCTATGGCGAAATGGAATCATATCAGTGATTTTTTT-------TAAATGGAAATTTAACT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121518015 188 - 127223203 AACCTCTTCTATCCCTCATTGCTCTTTCTTTTGA-CTGCGATAGGATACCTCTAGGCAAATCCGTATTCCCGAGATAGAGTGCCCTGTGGGTTAGCTATAAGTACACTCAGT----GGTAGGTTGAGGTATTATTTTTTATCTATGGCGAAATGGAATCGTATCAGTGATTTTTTT-------AAAATGGAAATTTAACT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 633899 187 + 1799296 AACCTTCTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCTATAGGATACCTCTAGGCAAATCCGTATTCCTGAGACAGAGTGCCCTGTGGGTTAGCTATAAGTACACTCAGT----GGTAGGTTGAAGTATTAGTTTTTATCTATGGCGACATGGAATCATATCAGTGATTTTTTT-------TAAATGGAAATTTAACT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186318 186 - 6934359 AACCTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGCGATAGGATACCTCTAAACAAATCCATATTCCCGAGACAGAGTGCCCTGTGGGTTAGCTGTAAGTAGACTCAGT----GGTAGGCTGAAATACTAGTTTTTATCTATGGTGAAATGGAGTCATATCAGTGA-TTTTTT-------AAAATGGGAATTTAACT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20060928 188 + 128169293 ACTTTTTTCTGTCTCTCATTGCTCTTTC-TCTGA-CTGTGATAGGACACCTCTAGGCAAGTCTGTATTCCAGAGACAGAGTGCCCTTTGGGTTAGCTGTGAGTACACTCATTAA-GGGTAGGCTGAAATACTAGTTTTTA-TTATGGTGAAATGGAATCATATTAGTGATTTTTTT--------AAATGGAAATTTAATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17646251 176 + 18371965 ACCTTTTTCTATCTCTCGTTGCTCTTTC-TTTGA-CTATGACAGGATACCTCTAGGCAAGTCTGTATTCCAGAGACAGAGTGCCCTTTGGGTTAGC------------CATTCA-GGGTAGGCTGAAATGTTAGTTTTTATTTATGGTGAAATGGAATCATATCAGTGATTTTTTT---------AATGGAAATTTAACT i saiBol1.JH378145 I 322 C 0 s cebCap1.NW_016107540v1 2180841 189 - 3566421 ACCTTTTTCTATCCCTCATTGCTCTTTC-TTTGA-CTGTGATAGGGTACCTCTAGGCAAGTCTGTATTCCAGAGACAGAGCGCCCTTTGGGTTAGCTACGAGTACACTCATTAA-GGGTAGGCTGAAATATTAGTTTTTATTTATGGTGTAATGGAATCATATCAGTGATTTTTTT--------TAATGGAAATTTAACT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7380335 188 + 9267652 ACCTTTTTCTATCCCTCATTGCTCTTTC-TTTGG-CTGTGATAGGATACCGCTAGGCAAGTTTGTATTCCAGAGACAGAGTGCCCTTTGGGTTAGCTATGAGTACACTCATTAA-GGGTAGACTGAAATATTAGTTTTTATTTATGGTGAAATGGAACCATATCAGTGATTTTTTT---------AATGGAAATTTAATT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1597860 178 - 14340318 CGGCCTCTCTGTTCCTTCTTCCTCT----TTGGT-CTATAATGAGATCCCCCTAACCAAATCTGTATCTC-----CAAAGTGCCTTGTGGTGGAG-----AGTATGTTCATAAA--GGCAGGCTGAAATATGAG-GTTCGTTGGTGGGGAA----AATAATTTTGGTGATTTTTTTCTTTTTTTAAGTGGAAATTTAACC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4085059 187 + 55844845 CACCTTCTATAGCCCTTATTCCTCTTCA-TTTCAGCTATCATTGGATACGCTTAACAAAATCTACATCCCAGAGACAAAGTGCCCTTTGCTTTACATACGAGTATTCTTCTTAA-AGATAGGCTGAATTATTTGGCTTTATCTATGGCAAAAC--AATCATTTTATTAAATTTTTA---------AATGGAATTTTAACT i canFam3.chr18 C 0 I 14651 s dasNov3.JH578441 256704 164 - 1446996 AACCATCT--------------TCCTCT-TTGGG-GTATAATTTGATATTCTTATCTAAATCTACA-CCCAGAGA---ATTCCCCTTTGGTTCAACTAT-AGTATGCTGACAAAAGTGTGGGCTGAAATATTTGGTTGTATCTAAGTTAAAATG-AATCATTTTAGTACATTTTTA-----------TGGAATTTTA--- i dasNov3.JH578441 C 0 C 0 e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=325887.000000 s hg38.chr14_KI270725v1_random 115965 27 + 172810 CTtgctatggtttgaatgcttgcccct s panTro5.chr1 126677364 27 + 228573443 CTtgctatggtttgaatgcttgaccct i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676688 27 + 162613886 CTtgctatggtttgaatgcttgcccct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 96156 27 + 126596 CTtgctatggtttgaaagcttgccctt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687454 27 + 72422247 CTtgctatggtttgaatgcttgcccct i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125464 27 - 99891981 CTtgctacggtttgaatgcttgcccct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52352230 27 + 185818997 CTtgctatggtttgaaagcttgcccct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124997931 27 - 192294377 CTtgctatggtttgaaagcttgcccct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 345151 27 - 3123512 CTtgctatggtttgaaagcttgcccct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578525 27 - 10077455 CTtgctatggtttgaaagcttgcccct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121518203 27 - 127223203 CTtgctatggtttgaaagcttgcccct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 634086 27 + 1799296 CTtgctatggtttgaaagcttgcccct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186504 27 - 6934359 CTtgctatggtttgaaagcttgcccct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20061116 27 + 128169293 TTtgctaccgtttgaatgcttgtcctc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17646427 27 + 18371965 TTtgctatggtttgaatgcttgtcctc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2181030 27 - 3566421 TTtgctacggtttgaatgcttgtcctc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7380523 27 + 9267652 TTtgctatggtttgaatgcttgtcctc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1598038 27 - 14340318 ACtgctatggtttggttgtttgtctcc i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 256868 13 - 1446996 --------------AATGCTTGCCCTT i dasNov3.JH578441 C 0 I 30333 e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=324749.000000 s hg38.chr14_KI270725v1_random 115992 30 + 172810 tcc-aatctcatgttaaaatttgatccccaa s panTro5.chr1 126677391 30 + 228573443 tcc-aatctcatgttaaaatttgatccccaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676715 30 + 162613886 tcc-aatctcatgttaaaatttgatccgcaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 96183 30 + 126596 tcc-aatctcatgttaaaatttgatccgcaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687481 31 + 72422247 tccaaatctcatgttaaaatttgatccccaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125491 31 - 99891981 tccaaatctcatgttaaaatttgatccccag i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52352257 31 + 185818997 tccaaatctcatgctgaaatttgataccaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124997958 31 - 192294377 tccaaatctcatgctgaaatttgataccaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 345178 31 - 3123512 tccaaatctcatgctgaaatctgataccaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578552 31 - 10077455 tccaaatttcatgctgaaatctgataccaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121518230 31 - 127223203 tccaaatctcatgctgaaatctgataccaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 634113 31 + 1799296 tccaaatctcatgctgaaatttgataccaag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186531 31 - 6934359 tccaaatctcatgctgaaatttgatccccag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20061143 31 + 128169293 tccaaatctcatgttaaaatttgatccccaa i calJac3.chr8 C 0 I 14649 s saiBol1.JH378145 17646454 31 + 18371965 tccaaatctcacgttaaaatttgatccccag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2181057 31 - 3566421 tccaaatctcatgttaaaatttgatccccag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7380550 31 + 9267652 tccaaatctcatgttaaaatttgatccccag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1598065 31 - 14340318 tccaaactgcatgttgaaacttggtccctga i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=593436.000000 s hg38.chr14_KI270725v1_random 116022 72 + 172810 tgttgcaggtggggcttactggaaggt-gtttggtcatggggttggaccttcatgaatggat-aataccct-----------ccc s panTro5.chr1 126677421 72 + 228573443 tgttgcaggtggggctcactgggaggt-gtttggtcatggggttggaccttcatgaatggat-aatacccg-----------ccc i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676745 72 + 162613886 tgttgcaggtggggcttactgggaggt-gtttggtcatggggttggaccttcatgaatggat-aataccct-----------ccc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 96213 72 + 126596 tgttgcaggtggggcttactgggaggt-gtttggtcatggggttggaccttcatgaatggat-aataccct-----------ccc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687512 72 + 72422247 tgttgcaggtggggattactgggaggt-gttgggtcatggggttggaccttcatgaatggat-aataccct-----------ccc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125522 71 - 99891981 tgttgcaggtggggcttactgg-aggt-gttgggtcatggggatggaccttcatgaatggat-aataccct-----------ccc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52352288 70 + 185818997 tgttgcaggtagggcttactgggaggt-gttgggtcatgggaatggaccctcaggaacggat-aatacccc-----------t-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124997989 70 - 192294377 tgttgcaggtagggcttactgggaggt-gttgggtcatgggaatggaccctcaggaacggat-aatacccc-----------t-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 345209 70 - 3123512 tgttgcaggtagggcttactgggaggt-gttgggtcatgggaatggaccctcagcaacggat-aatacccc-----------t-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578583 70 - 10077455 ttttgcaggtagggcttactgggaggt-gttgggtcatgggaatggaccctcacgaacggat-aatacccc-----------t-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121518261 70 - 127223203 tgttgcaggcagggcttactgggaggt-gttgggtcatgggaatggaccctcacgaagggat-aatacccc-----------t-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 634144 70 + 1799296 tgttgcaggtagggcttactgggaggt-gttgggtcatgggaatggaccctcacgaacggat-aatacccc-----------t-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186562 70 - 6934359 tgttgcaggtagggcttactgggaagt-gttgggtcatgggaatggactctcatgaatggat-aatacccc-----------t-- i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17646485 55 + 18371965 tgttgaaggtgggacctactgggagat-gttgggtcatggag--------------atggat-aataccct-------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2181088 68 - 3566421 tgttgaaggtgggacctattgggatat-gttgggtcatggggatggacc-tcatgaatggat-aataccct-------------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7380581 80 + 9267652 tgttgaaggtgggacctactgggagataattgggtcatggggatggact-tcataaatggat-aatatcctccctcagaaat--- i aotNan1.NW_018514471v1 C 0 I 9798 s otoGar3.GL873564 1598096 72 - 14340318 tgttagagctggggcccagtgggaggt-gctgggtca-ggggtgaatccctcctgaataggtaaatgccct-----------ccc i otoGar3.GL873564 C 0 I 30743 e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e calJac3.chr8 20061174 14649 + 128169293 I a score=6458.000000 s hg38.chr14_KI270725v1_random 116094 8 + 172810 ttagAAAT s panTro5.chr1 126677493 8 + 228573443 ttaggAAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676817 8 + 162613886 ttagAAAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 96285 7 + 126596 ttagg-at i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687584 8 + 72422247 ttaggAAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125593 8 - 99891981 ttaggAAA i nomLeu3.chr17 C 0 C 0 e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e saiBol1.JH378145 17646540 0 + 18371965 C e otoGar3.GL873564 1598168 30743 - 14340318 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181156 0 - 3566421 C e calJac3.chr8 20061174 14649 + 128169293 I e colAng1.NW_012115910v1 5186632 0 - 6934359 C e manLeu1.NW_012105809v1 634214 0 + 1799296 C e chlSab2.chr21 121518331 0 - 127223203 C e cerAty1.NW_012000909v1 7578653 0 - 10077455 C e macNem1.NW_012011522v1 345279 0 - 3123512 C e macFas5.chr3 124998059 0 - 192294377 C e rheMac8.chr3 52352358 0 + 185818997 C a score=5840222.000000 s hg38.chr14_KI270725v1_random 116102 741 + 172810 CTAAAGCTATCCTCCCTCCTCGGTGCCCTCAGGAATGAGTGTACCattctttattcacctataattcccccacccatcctttttgagatgttaattacatgtatgttacactgctgcatattgtctgacttatcagtgagtttctggctttcttattttagtttaccctttgtcctttagtttgtaaagcttctatttttttctataaattttctgatgtttgggtaaaatccattacttattctatctcatggaatttttatttctaatatttatttttcatctatacatgtcacatttttcattttataacttctattttt---ctatgttcaattttcatttaagtgccttgac------------atatatatgtatttacctatatgta----------------------------------------------tttataaaatatgt-ttactttaaggaccttgaaatttccttcttttctgtcatttataaatgacttatttttatcctgttaatatatgtcttaag--tatatatatcttacggcttctttgcatgtcagagtttttttt-ggggggggttttttgatgttatgctattgactatctagattttattggctacctttgaacaatg----ttgtggcaggcagttcagtaacttcaggatgagtatttgtctgttgttgttttaaatcttctctttaaactttgtggagttagtctagagccatctgtaatttggagctatatgagcactgtcactagggcatgaaactccagtggtctttactgaatatc s panTro5.chr1 126677501 736 + 228573443 CTAAAGCTATCCTCCCTCCTCGCTGCCCTCAGGAATGAGTGTACCATTCTTTATTCACCTATAATTTCCCCACCCATCCTTTTTGAGATATTGATTACATGTATGTTACACTGCTGCATATTGTCTGACATATCAGTGAGTTTCTGGCTTTCTTATTTTAGTTTACCCTTTGTCCTTTAGTTTGTAAAGCTTCTATTTTGTTCTATAAATTTTCTGTTGTTAGGGTAAAATCCATTACTTATTCTATCTCATGGAATTTTTATTTCAAATATTTATTTTTCATCTATACATGTCACA-TTTTCATTTTATAACTTCTATTTTTCTCCTATGTTCAATTTTCATTTAAGTACCCTGAC------------atatatatgtatttatctatatgta----------------------------------------------tttataaaatatat-ttaCTTTTAGGACCTTGAAATTTCTTTCTTCTCTGTCATTTATAAATGACTTATTTTTATCCTGTTAATATATGTCTTAAT------TATATCTTACGGCTTCTTTGCATGTCAGAGTTTCTTTT----GGGGGTATTTTGGTGTTATGCTATTGAATATCTAGATTTGATTGGCAACCTTTGAACAATG----TTGTGGAAGGCAGTTCAGTACCTTCAGGATGAGTATTTTTCTGTTGTTGTTTTAAATCTTCTCTTTAAACTTTGTTGAGTAAGTCTAGAGCCATCAGTAATTTTGAGCTAAATGAGCACTGTCACTAGGGCATGAACCTCCAGTGGTCTTTACTGAATATC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74676825 742 + 162613886 CTAAAGCTATCCTCCCTCCACGGTGCCCTCAGGAATGAGTGTACCATTCTTTATTCACCTATAATTCCCCCACCCATCCTTTTTGAGATATTGATTACATGTATGTTACACTGCTGCATATTGTCTGACGTATCAGTGAGTTTCTGGCTTTCTTATTTTAGTTTACCCTTTGTCCTTTAGTTTGTAAAGCTTCTATTTTTTTCTATAAATTTTCTTATGTTAGGGTAAAATCCATTACTTATTCTATCTCATGTAatttttatttcaaatatttatttttcatctatacatgtcacatttttcattttataacttctatttttctcctatgttcaattttcatttAAGTACCTTGAC------------atatatatgtatttatctatatgta----------------------------------------------tttataaaatatat-ttaCTTTAAGGACCTTGAAATTTGCTTCTTTTCTGTCATTTATAAATGACTTATTTTTATCCTGTTAACATATATCTTAATTATATATATATCTTACGGCTTCTCTGCATGTCAGAGTTTTTTTT-----TGGATATGTTGATGTTATGCTATTGAATATCTAGATTTTATTAGGTACCTTTGAACAACG----TTGTGGCAGGCAATTCAGTAAATTCAGGATGAGTATTTGTCTGTTGTTGTTTTAAATCTTCTGTTTAAACTTTGTGGAGTTAGTCTAGAGCCATCTGTAATTTGGAGCTAAATGAGCACTGTCACTAGGGCATGAACCTCCAGTGGTCTTTATTGAATATC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 96292 736 + 126596 CTAAAGCTATCCTCCCTCCTCGTTGCCCTCAGGAATGAGTGTTCCATTCTTTATTCACCTGTAATTGCCCCACCCATCCTTTTTGAGATATTAATTACATGTATGTTACACTGCTGCATATTGTCTGACGTATCAGTGAGTTTCTGGCTTTCTTATTTTAGTTTACCCTTTGTCCTTTAGTTTGTAAAGCTTCTAATTTGTTCTATAAATTTTCTGATGTTAGGGTAAAATCCATTACTTATTCTATCTCATGGAatttttatttcaaatatttatttttcatctatacatgtcacatttttcattttataacttctatttttctcctatgttcaattttcatttAAGTACCTTGAC------------atatatatgtatttatctatatgta----------------------------------------------tttataaaatatat-ttaCTTTAAGGACCTTGAAATTTCCTTCTTTTCTGTCATTTATAAATGACTTATTTTTATCCTGTTAATATATATCTTAAT--TATATATATCTTACGGCTTCTTTGCATGTCAGAGGTTTTTTT-----TGGGTAT-TTGATGTTATGCTATTGAATACCTAG-TTTTATT-GCTACCTTTGAACAATG----TTGTGGCAGGCAGTTCAGTAACTTCAGGATGAGTATTTGTCTGTTGTTGTTTTAAATCTTCTCTTTAAACTTTGTGGAGTTAGTCTAGAGCCATCTGTAATTTGGAGCTAAATGAGCACTGTCACTAGGGCATGAACCTCCAGTGGT-TTTACTGAATATC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5687592 744 + 72422247 CTCAAGCTATCCTCCCTCTTCGGTGCCCTCAGGAATGAGTGTACCATTCTTTATTCAACTATAATTCCCCCACCCATCctttttgagatattaattacatgtatgttacactgctgcatattgtctcacgtatcagtgagtttctggctttcttattttagtttaccctttgtcctttagtttgtaaagcttctatttttttctataaattttctgaTGTTAGGGTAAaatccattacttattctatctcatggaatttttatttcaaatatttatttttcatctatatatgtcacatttttcattttataacttctatttttctcctatgttcaattttcatttaagtaatttgac------------atatatatgtatttatctatatgta----------------------------------------------cttatacaatatat-ttactttaaggaccttgaaaattccttcttctctgtcatttataaatgacttatttttatcatgttaatgtatatcttaat--aatatat-tcttccggcttctttgcatgtcagaggtttttttttttttgggtactttgatgttatgctattgaatatctagattttattggctacctttgaacaatg----ttgtggcaggcagttcagtaacttcaggatgagtatttttctgttgttgttttaaatcttctctttaaactttgttgagttagtctagagccatctgtaatttggagctaaatgagcactgtcactagggcatgaacctccagtggtctttactggatatc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44125601 742 - 99891981 CTCAAACCATCTTCCCTCCTCGGTGCCCTTAGGAATGAGAGTACCATTCTTTATTCAACTATAATTCCCCCACCCATCctttttgagatatcagttacatgtatgttacactgctgcatattggctcacatatcagtgagtttctggctttcttattttagtttaccctttgtccttcagtttgtaaagcttctatttt-ttctataaattttctgatgttagggtaaaatccattacttactctatctcatggaatttttatttcaaatatttatttttcatctatacacgtcaca-ttttcattttataacttctatttttcttctgtgttcaattttcatttaagtaatttgac------------atatatatatatttatctatatgta----------------------------------------------tttataaaatatatattactttaaggaccttgaaaattccttcttctctgtcatttataagtgacttatttttatcctgttaatatatatcttaat--aatgtatatcttccagcttctttgcatgtcagaggtttcttt-ggggggcatattttgatgttatggtattgaatatgtagattttattggctacctttgaacaatg----ttgtggcaggcagttcagtaacttcaagatgagtatttttctgttgttgttttaaatcttctctttaaactttgttgagttagtctagagccatctgtaatttgcagctaaatgagcactatcactagggcatgaa-ctccagtggcctttactgaatatc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52352358 709 + 185818997 -------------------------ccctcaggaatgagtgtcccattctTTATTCAACTGTAATTCCCCCACCCAccctttttgagataccagttacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggcttttttattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctataaatcttctgatgttagggtaaaatccattacttattgtatctcatggaatttttatttcaaatatttatttttcatctatacatgtcacacttttcattttataacttctatttttctcctatgttcaattttcatttaagtaatttgac------------atata----tatttatctatatatc----------------------------------------------tttataaaatatatattactttaaggaccttgaaaattccttcttctctgtcatttataaatgacctatttttatcctgttaatatatatcttaat--aatatatatcttcctgcttctttgcatgtcagaaatttt--------ggggtattttgatgttatgctattcaatatctggattttattggctacctttgaacagtg----ttgtggcaggcagttcagtaactttaggatgagtattttcctgttgctgttttaaatcttctctttaaacattgttgagttattctagagccatctgtaatttagagctaactgagcactattactagggcatgaacctccagtggtctttactgaatatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 124998059 709 - 192294377 -------------------------ccctcaggaatgagtgtcccattctTTATTCAACTGTAATTCCCCCACCCAccctttttgagataccagttacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggcttttttattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctataaatcttctgatgttagggtaaaatccattacttattgtatctcatggaatttttatttcaaatatttatttttcatctatacatgtcacacttttcattttataacttctatttttctcctATGTTCAATTTTCATTTAAGTAATTTGAC------------atata----tatttatctatatatc----------------------------------------------tttataaaatatatatTACTTTAAGGACCTTGAAAATTCCTTCTTCTCTGTCATTTATAAATGACCTATTTTTATCCTGTTAATATATATCTTAAT--AATATatatcttcctgcttctttgcatgtcagaaatttt--------ggggtattttgatgttatgctattcaatatctggattttattggctacctttgaacagtg----ttgtggcaggcagttcagtaactttaggatgagtattttcctgttgctgttttaaatcttctctttaaacattgttgagttattctagagccatctgtaatttagagctaactgagcactattactagggcatgaacctcccgtggtctttactgaatatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 345279 709 - 3123512 -------------------------ccctcaggaatgagtgtcccattctTTATTCAACTGTAATTCCCCCACccaccctttttgagataccagttacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggcttttttattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctataaatcttctgatgttagggtaaaatccattacttattgtatctcatggaatttttatttcaaatatttatttttcatctatacatgtcacacttttcattttataacttctatttttctcctatgctcaattttcatttaagtaatttgac------------atata----tatttatctgtatatc----------------------------------------------tttataaaatatatattactttaaggaccttgaaaattccttcttctctgtcatttataaatgacctatttttatcctgttaatatatatcttaat--aatatatatcttcctgcttctttgcatgtcagaaatttt--------ggggtattttgatgttatgctattcaatatctggattttattggctacctttgaacagtg----ttgtggcaggcagttcagtaactttaggatgagtattttcctgttgctgttttaaatcttctctttaaacattgttgagttattctagagccatctgtaatttagagctaactgagcactattactagggcatgaacctccagtggtctttactgaatatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7578653 709 - 10077455 -------------------------ccctcaggaatgaatgtcccattctTTATTCAACTGTAATTCCCCCACccaccctttttgagataccagttacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggcttttttattttagtttcccctttgtccttcagtttgtaaagcttctatttctgtctataaatcttctgatgttagggtaaaatccattacttattgtatctcatggaatttttatttcaaatatttatttttcatctatacatgtcacacttttcattttataacttctatttttctcctatgttcaattttcatttaagtaatttgac------------atata----tatttatctatatatc----------------------------------------------tttataaaatatatattactttaaggaccttgaaaattccttcttctctgtcatttataaatgacctatttttatcctgttaatatatatcttaat--aatatatatcttcctgcttctttgcatgtcagaaatttt--------ggggtattttgatgttatgctattcaatatctggattttattggctacctttgaacagtg----ttgtggcaggcagttcagtaactttaggatgagtattttcctgttgctgttttaaatcttctctttaaacattgttgagttattctagagccatctgtaatttagagctaactgagcactattactagggcatgaacctccagtggtctttactgaatatc i cerAty1.NW_012000909v1 C 0 I 15561 s chlSab2.chr21 121518331 709 - 127223203 -------------------------ccctcaggaatgagtgtcccattctTTATTCAACTGTAATTCCCCCACccaccctttttgagataccaattacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggctttcttattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctataaatcttctgatgttagggtaaaatccattacttattgtatctcatggaatttttatttcaaatatttatttttcatctatacatgtcacacttttcattttataacttctatttttctcctatgttcaactttcatttaagtaatttgac------------atata----tatttatctatatatc----------------------------------------------tttataaaatatatattactttaaggaccttgaaaattccttcttctctgtcatttataaatgacctatttttatcctgttaatatatatcttaat--aatatatatcttcctgcttctttgcatgtcagaaatttt--------ggggtattttgatgttatgctattcaatatctggattttattggctacctttgaacagtg----tcgtggcaggcagttcagtaactttaggatgaatattttcctgttgctgttttaaatcttctctttaaactttcttgagttattctagagccatctgtaatttagagctaaatgagcactatccctagggcatgaacctccagtggtctttactgaatatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 634214 709 + 1799296 -------------------------ccctcaggaatgagtgtcccattctTTATTCAACTATAATTCCCCCACCCAccctttttgagataccagttacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggcttttttattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctataaatcttctgatgttagggtaaaatccactacttattttagctcatggaatttttatttcaaatatttatttttcatctatacatgtcacacttttcattttataacttctatttttctCCTATGTTCAATTTTCATTTAAGTAATTTGAC------------atata----tatttatctatatatc----------------------------------------------tttatgaaatatatatTACTTTAAGGACCTTGAAAATTCCTTCCTTTCTGTCATTTATAAATGACCTATTTTTATCCTGTTAATATATATCTTAAT--AATATATGTCTTCCTGCTTCTTTGCATGTCAGAAATTTT--------GGGGTATTTTGATGCTATGCTATTCAATATCTGGATTATATTGGCTACCTTTGAACAGTG----TTGTGGCAGGCAGTTCAGTAACTTTAGGATGAGTATTTTCCTGTTGCTGTTTTAAATCTTCTCTTTAAACATTGTTGAGTTATTCTAGAGCCATCTGTAATTTAGAGCTAAATGAGCACTATCACTAGGGCATGAACCTCCAGTGGTCTTTACTGAATATC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5186632 706 - 6934359 -------------------------ccctcaggaatgagtgtcccattctTTATTCAACTATAATTCCCCCACccaccctttttgagataccagttacatgtatgttacactgctgcatattgtctcatgtatcagtgagtttctggctttcttattttagttcctcctttgtccttcagtttgtaaagcttctatttttgtctataaatcttctgatgttagggtaaaatccattacttattatatctcacggaattttcatttcaaagatttatttttcatctatacatgtcacacttttcattttataacttctattttt---ctatgttcaattttcatttaagcaatttgac------------atatg----tatttatctatatgtc----------------------------------------------tttataaaatatatattactttaaggaccttgaaaattccttcttctctgtcatttataaatgacttatttttatcctgttaatatatatcttaat--aatatatatcttcctgcttctttgcatgtcagaaatttt--------ggggtattttgatgttatgctattcaatacctggattttattggctacctttgaacagtg----ttgtggcaggcagttcagtaactttaggatgagtattttcctgttgctgttttaaatcttctctttaaactttgttgagttattctagagccatctgtaatttagagctaaatgagcactatcactagggcatgaacttccagtggtctttattgaatatc i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17646540 768 + 18371965 -------------------------ctctcaggaatgagtgtactattATTTATTCAACTGTAATTCCCACACCCATCctttctgagataccaatgacacgtatgttacagggctgcatgctggctcctggatcagtgagcttctggctttcctattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctgtaaACTTTCAGATGTTAGGGCAAAATTCGTTACTTATTCTGTCTTGTGGAATTTTTATTTTAAACATTTATTGTTCATCTATACATGTCACATT-----TTTTATAACTTCTATTTTTTCCCTATGTTCAATTTTCATTTAAAAA--TTGACATCGTTATGTTTATATATATATAtgtatatgtgtgtgtgtgtgtatatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtCTATAAGATATATATTACTTTAAGGACCTTGAAAATTCCTTCttctctgtcatttataaatgactta-ttttctcctgttaatacatatattaat--aatacatatctttctgtttctttgcatgccagggttttgttgg----gggctactttgatgttatgctattgaatatctggaatttattggctacctttgaatagtgtttattgtggcaggcagttcagtgacttcaggatcagtatttttctgt---tgttttaaatcttctctttaaactttgttgagtttgtctagagtcatctttagttcagagctaactgagcactatcactagggcgtgaacctccactggtctttactgaatatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2181156 737 - 3566421 -------------------------cgctcaggaatgagtgTACTATTATTTATTCAACTATAAttcccccacccatcctttttgagataccaattacacgtatgttacatggctgcatatcgtctcatggatcagtgagtttctggctttcctattttagtttcccctttgtccttcagtttgtaaagcttctatttttgtctgtaaattttctgatgttagggtaaaatccattacttattctgtctcatggaatttttattttaaacatttattattcatctatatgtgtcacatt-----ttttataacttctattttttcc--gtgttcaattttcatttaagaaatttgac------------atatatatgtatttatatatgtgtg--------------------tgtgtgtgtgtgtgtgtgtgtgtgtatttataaaatatatattactttaaggaccttgaaaattccctcttctctgtcatttataaatgatttatttttctcctgttcatatatatcttaat--aatatatatcttcctgtttctttgcatgtcagggttttgttgg----ggggtactttgatgttatgctattgaatatctggaatttattggctacctttgaacaatgtttgttgtggcaggcagttcagtgatttcaggatcagtatttttctgt---tgttttaaatcttctctttaaactttgttgagtttgcctagagccatctttaattcagagctaactgagcattatcactagggcatgaacctccattggtctttactgaatatc i cebCap1.NW_016107540v1 C 0 C 0 e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1598168 30743 - 14340318 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e calJac3.chr8 20061174 14649 + 128169293 I a score=206716.000000 s hg38.chr14_KI270725v1_random 116843 30 + 172810 ctagagatacagaggtgattcccttctctg s panTro5.chr1 126678237 30 + 228573443 CTGGAGGTACAGAGGGGATTCCCTTCTCTG i panTro5.chr1 C 0 I 19432 s panPan2.chr7 74677567 30 + 162613886 CTGGAGGTACAGAGGCTATTCCCTTCTCTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97028 30 + 126596 CTGGAGGTACAGAGGGGATTCCTTTCTCTG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5688336 30 + 72422247 ctggaggtacagaggggattcccttctctg i ponAbe2.chrUn C 0 I 5371 s nomLeu3.chr17 44126343 30 - 99891981 ctggatgtacagagaggattcccttctctt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52353067 30 + 185818997 ttggatgttcagaggggatttccttctctg i rheMac8.chr3 C 0 I 15376 s macFas5.chr3 124998768 30 - 192294377 ttggatgttcagaggggatttccttctctg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 345988 30 - 3123512 ttggatgttcagaggggatttccttctctg i macNem1.NW_012011522v1 C 0 I 15238 s chlSab2.chr21 121519040 30 - 127223203 ttggatgttcagaggggattcccttctctg i chlSab2.chr21 C 0 I 13537 s manLeu1.NW_012105809v1 634923 30 + 1799296 TTGGATGTTCAGAGGGGATTTCCTTCTCTG i manLeu1.NW_012105809v1 C 0 I 29628 s colAng1.NW_012115910v1 5187338 30 - 6934359 ttggatgttcaaaggggattcccttctctg i colAng1.NW_012115910v1 C 0 I 13475 s saiBol1.JH378145 17647308 30 + 18371965 ctggaagttcagaggggattcccctctctg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2181893 30 - 3566421 ctggatgttcagaggggattcccctctctg i cebCap1.NW_016107540v1 C 0 I 9959 e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1598168 30743 - 14340318 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e calJac3.chr8 20061174 14649 + 128169293 I e cerAty1.NW_012000909v1 7579362 15561 - 10077455 I a score=3955.000000 s hg38.chr14_KI270725v1_random 116873 5 + 172810 attag s panPan2.chr7 74677597 5 + 162613886 ATTAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97058 5 + 126596 ATTAG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44126373 5 - 99891981 gctag i nomLeu3.chr17 C 0 I 11875 s macFas5.chr3 124998798 5 - 192294377 gctgg i macFas5.chr3 C 0 I 15361 s saiBol1.JH378145 17647338 5 + 18371965 gttgg i saiBol1.JH378145 C 0 I 10132 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1598168 30743 - 14340318 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e calJac3.chr8 20061174 14649 + 128169293 I e colAng1.NW_012115910v1 5187368 13475 - 6934359 I e manLeu1.NW_012105809v1 634953 29628 + 1799296 I e chlSab2.chr21 121519070 13537 - 127223203 I e cerAty1.NW_012000909v1 7579362 15561 - 10077455 I e macNem1.NW_012011522v1 346018 15238 - 3123512 I e rheMac8.chr3 52353097 15376 + 185818997 I e panTro5.chr1 126678267 19432 + 228573443 I a score=18175.000000 s hg38.chr14_KI270725v1_random 116878 16 + 172810 aaTTTGGAAGATAAAG- s panPan2.chr7 74677602 16 + 162613886 AATTTGGAATATAAAG- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97063 16 + 126596 AGTTTGGAATATAAAG- i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67280217 16 + 192294377 AATTTGGAATATAAAT- i macFas5.chr3 n 15361 I 1 s calJac3.chr8 108093474 16 - 128169293 AATTTGGAAGATAAAT- i calJac3.chr8 n 14649 C 0 s saiBol1.JH378145 714494 16 - 18371965 AATTTGGTATATAAAG- i saiBol1.JH378145 n 10132 C 0 s otoGar3.GL873564 12711416 16 + 14340318 AATTTGGAA-ATGAACA i otoGar3.GL873564 n 30743 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e colAng1.NW_012115910v1 5187368 13475 - 6934359 I e manLeu1.NW_012105809v1 634953 29628 + 1799296 I e chlSab2.chr21 121519070 13537 - 127223203 I e cerAty1.NW_012000909v1 7579362 15561 - 10077455 I e macNem1.NW_012011522v1 346018 15238 - 3123512 I e rheMac8.chr3 52353097 15376 + 185818997 I e nomLeu3.chr17 44126378 11875 - 99891981 I e panTro5.chr1 126678267 19432 + 228573443 I a score=968250.000000 s hg38.chr14_KI270725v1_random 116894 175 + 172810 AGAAAAGAGAAAAATACAAAGCTATGCATAAACACGTGCATTAAAGTGAATTTTATGTGGG------------CTTTTTCATGAAAATGTTCCTAAGGTATTTTAttttttt----attgtggtaaaatacacataacataaaatgtactctgttaaccattttaagtgtacagttcagtggtactaaata s panPan2.chr7 74677618 175 + 162613886 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACACGTGAATTAAAGTGAATTTTATGTGGG------------CTTTTTCATGAAAATGTTCCTAAGCTATTTTAttttttt----actgtggtaaaatacacataacataaaatgtactctgttaaccattttaagtgtacagttcagtggtactaaata i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97079 172 + 126596 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACACGTGCATTAAAATGAA-TTTATGTGGG------------CTTTTTCATGAAAATGTTCCTAAGGTATTt--ttttttt----attgtggtaaaatacacataacataaaatgtactctgttaaccattttaagtgtacagttcagtggtactaaata i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133450547 170 - 185818997 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCCTAAGGTATTTTAttttttt----attgtcgtaaaatac-----acataaaatgtactctgtttaccattttaagtatatagttcagtggtactaaata i rheMac8.chr3 n 15376 C 0 s macFas5.chr3 67280234 170 + 192294377 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCCTAAGGTATTTTAttttttt----attgtcgtaaaatac-----acataaaatgtactctgtttaccattttaagtatatagttcagtggtactaaata i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 2762279 170 + 3123512 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCCTAAGGTATTTTAttttttt----attgtcgtaaaatac-----acataaaatgtactctgtttaccattttaagtatatagttcagtggtactaaata i macNem1.NW_012011522v1 n 15238 C 0 s cerAty1.NW_012000909v1 2482555 170 + 10077455 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCGTAAGGTATTTTAttttttt----attgtcgtaaaatac-----acataaaatgtactctgtttaccattttaagtatatagttcagtggtgctaaata i cerAty1.NW_012000909v1 n 15561 C 0 s chlSab2.chr21 5690619 170 + 127223203 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCCTAAGGTGTTTTAttttttt----attgtcataaaatgc-----acataaaatgtactctgtttaccattttaagtatatagttcagtggtactaaata i chlSab2.chr21 n 13537 C 0 s manLeu1.NW_012105809v1 1134738 170 - 1799296 AGAAAAGAGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCGTAAGGTATTTTAttttttt----attgtcataaaatac-----acataaaatgtactctgtttaccattttaagtatatagttcagtggtactaaata i manLeu1.NW_012105809v1 n 29628 C 0 s colAng1.NW_012115910v1 1733539 175 + 6934359 AGAAAAGGGAAAAATAGAAAGCTATGCATAAACATATGCATTAAAATGAATTTTATGTGAA------------CTCTTTCATGAAAATGTTCCTAAGGTATTTTAttttttt----attgtcgtaaaatacacataacataaaatgtactctgttaaccattttaaatatatagttcagtggtactaaaaa i colAng1.NW_012115910v1 n 13475 C 0 s calJac3.chr8 108093490 182 - 128169293 ATAAAAGAGAAAAATAGAAATTTATGCATAAACATAAGCATTAAAATAAATTTTATGTGGTCAGTCC-TGTGTCTCTTTGGTGAAAATGTTTCTAAGGTGTTTTAtttttt-----attgtggtaaaatacacataacataaaatgta--ctgttaatcatttt-agtgtacagttcagaggtactaaata i calJac3.chr8 C 0 I 38 s saiBol1.JH378145 714510 187 - 18371965 ATAAAAGAGAAAAATAGAAAGTTATGTATAAACACATGCATTAAAATAAATTTTATGTGAACAGTCC-TGTGTCTCTTTCGTGAAAATGTTTCTAAGGTATTTTGttttttt---aattgtggtaaaatacacataacgtcaaatgtagtgtgttcaccattttaagtgtacagttcagtggtactaaata i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12711432 191 + 14340318 TAAAAATAGAAAAATACAAAACTATGCATAAACGCATTCATTACAATGAGTTTTCTGAGAATGGTCCTTGTGCCTCTTTTACAAAAATCTTTTTAAAGTATTTGATTTtttttttcattatggcaaaatacacaaaacataaaatttagtatcttagccattttaagtgtacagctaagtggtattaaata i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e nomLeu3.chr17 44126378 11875 - 99891981 I e panTro5.chr1 126678267 19432 + 228573443 I a score=45595.000000 s hg38.chr14_KI270725v1_random 117069 9 + 172810 gagtcataa s panPan2.chr7 74677793 9 + 162613886 tagtcataa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97251 9 + 126596 tagtcataa i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133450717 9 - 185818997 tagtcataa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67280404 9 + 192294377 tagtcataa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2762449 9 + 3123512 tagtcataa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2482725 9 + 10077455 tagtcataa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5690789 9 + 127223203 tagtcataa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1134908 9 - 1799296 tagtcataa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1733714 9 + 6934359 tagtcataa i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 714697 9 - 18371965 tagtaatga i saiBol1.JH378145 C 0 I 29 s otoGar3.GL873564 12711623 9 + 14340318 tattcacaa i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e calJac3.chr8 108093672 38 - 128169293 I e nomLeu3.chr17 44126378 11875 - 99891981 I e panTro5.chr1 126678267 19432 + 228573443 I a score=75646.000000 s hg38.chr14_KI270725v1_random 117078 20 + 172810 cattgtgc-agccgtccctac s panPan2.chr7 74677802 20 + 162613886 cattgtgc-agccgtccctaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97260 19 + 126596 cattgtgc-agctgtcccta- i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133450726 20 - 185818997 cattgtgc-agccatccctac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67280413 20 + 192294377 cattgtgc-agccatccctac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2762458 20 + 3123512 cattgtgc-agccatcgctac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2482734 20 + 10077455 cattgtgc-agccatccctac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5690798 20 + 127223203 cattgtgc-agccatccctac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1134917 20 - 1799296 cattgtgc-cgccatccctac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1733723 20 + 6934359 tattgtgc-agccatccctac i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12711632 21 + 14340318 cattgtgcaaaacatcacggc i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e saiBol1.JH378145 714706 29 - 18371965 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e calJac3.chr8 108093672 38 - 128169293 I e nomLeu3.chr17 44126378 11875 - 99891981 I e panTro5.chr1 126678267 19432 + 228573443 I a score=652913.000000 s hg38.chr14_KI270725v1_random 117098 108 + 172810 catccatctccataattcgtttcatcttgtaaaactgaaactctatacccattaaaaaatacttccccatttcttcctccccccagcttctggcaaccatcattgtac s panPan2.chr7 74677822 108 + 162613886 catctatctccataattcgtttcatcttgtaaaactgaaactctatacccattaaacaataattccccatttcttcctccccccagcttctggcaaccatcattgtac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97279 106 + 126596 catccatctccataattcgtttcatcttgtaaaactgaaactctatacccattaaacaatacttccccatttcttcctccccccagcttctggc-accatcatt-tac i gorGor5.CYUI01000522v1 C 0 C 0 s rheMac8.chr3 133450746 108 - 185818997 catccatctccataacttgtttcatattgtaaaactgaaactctgtacccattaaacaatatttcctcatttcttcctccccccagcttctggcaaccatcattgtac i rheMac8.chr3 C 0 n 0 s macFas5.chr3 67280433 108 + 192294377 catccatccccataacttgtttcatattgtaaaactgaaactctgtacccattaaacaatatttcctcatttcttcctccccccagcttctggcaaccatcattgtac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2762478 108 + 3123512 catccatctccataacttgtttcatattgtaaaactgaaactctgtacccgttaaacaatatttcctcatttcttcctccccccagcttctggcaaccatcattgtac i macNem1.NW_012011522v1 C 0 n 0 s cerAty1.NW_012000909v1 2482754 108 + 10077455 catccatctccataactcgtttcatattgtaaaactgaaactctgtacccattaaacaatatttcctcatttcttcctccccccagcttctggcaaccatcattgtac i cerAty1.NW_012000909v1 C 0 n 0 s chlSab2.chr21 5690818 108 + 127223203 catccatctccataactcgtttcatattgtaaaactgaaactctgtacccattaaacaatatttcctcatttcttcctccccccagcttctggcaaccatcattgtac i chlSab2.chr21 C 0 n 0 s manLeu1.NW_012105809v1 1134937 108 - 1799296 catccatctccataactcgtttcatattgtaaaactgaaactctgtacccattaaacaatatttcctcatttcttcctccccccagcttctggcaaccatcattgtac i manLeu1.NW_012105809v1 C 0 n 0 s colAng1.NW_012115910v1 1733743 108 + 6934359 catccatctccataactggtttcatattgtaaaactgaaactctgcacccattaaacaatatttccccatttcttcctccccccagcttctggcaaccatcattgtac i colAng1.NW_012115910v1 C 0 n 0 s calJac3.chr8 108093710 107 - 128169293 tacccatctctataactcgtttcatcttgtaaaaccgaaactctgtactcattaaacaatagttccccatttcttcctttcctcagc-tctggcctccatcattttac i calJac3.chr8 I 38 C 0 s saiBol1.JH378145 714735 108 - 18371965 tatccatctctagaacttgtttcatcttgtagaactgaaactctgtactcattaaacaatacttctccatttcttcctttcttcagcttctagcaaccatcattttac i saiBol1.JH378145 I 29 C 0 s otoGar3.GL873564 12711653 107 + 14340318 catccatttccataattcagttcatcttgtaaaa-tgagattctctgctcattacacattatttctctatttctccttctcccaagcctctgggaaccaccattctac i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e nomLeu3.chr17 44126378 11875 - 99891981 I e panTro5.chr1 126678267 19432 + 228573443 I a score=7265.000000 s hg38.chr14_KI270725v1_random 117206 6 + 172810 ----catctc s panPan2.chr7 74677930 6 + 162613886 ----catctc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97385 6 + 126596 ----catctc i gorGor5.CYUI01000522v1 C 0 C 0 s macFas5.chr3 67280541 6 + 192294377 ----tgtctc i macFas5.chr3 C 0 n 0 s calJac3.chr8 108093817 6 - 128169293 ----tacctc i calJac3.chr8 C 0 n 0 s saiBol1.JH378145 714843 6 - 18371965 ----tacctc i saiBol1.JH378145 C 0 n 0 s otoGar3.GL873564 12711760 10 + 14340318 cttttgtctc i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 256881 30333 - 1446996 I e canFam3.chr18 4085246 14651 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e colAng1.NW_012115910v1 1733851 0 + 6934359 I e manLeu1.NW_012105809v1 1135045 0 - 1799296 I e chlSab2.chr21 5690926 0 + 127223203 I e cerAty1.NW_012000909v1 2482862 0 + 10077455 I e macNem1.NW_012011522v1 2762586 0 + 3123512 I e rheMac8.chr3 133450854 0 - 185818997 I e nomLeu3.chr17 44126378 11875 - 99891981 I e panTro5.chr1 126678267 19432 + 228573443 I a score=6247.000000 s hg38.chr14_KI270725v1_random 117212 2 + 172810 tg s panPan2.chr7 74677936 2 + 162613886 ta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97391 2 + 126596 ta i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44138253 2 - 99891981 TA i nomLeu3.chr17 I 11875 C 0 s macFas5.chr3 125014164 2 - 192294377 TA i macFas5.chr3 I 15361 C 0 s calJac3.chr8 20075823 2 + 128169293 TA i calJac3.chr8 I 14649 C 0 s saiBol1.JH378145 17657475 2 + 18371965 TA i saiBol1.JH378145 I 10132 C 0 s otoGar3.GL873564 12711770 2 + 14340318 tg i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4099897 2 + 55844845 TA i canFam3.chr18 I 14651 C 0 s dasNov3.JH578441 287214 2 - 1446996 TA i dasNov3.JH578441 I 30333 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e aotNan1.NW_018514471v1 7380661 9798 + 9267652 I e cebCap1.NW_016107540v1 2181923 9959 - 3566421 I e colAng1.NW_012115910v1 1733851 0 + 6934359 I e manLeu1.NW_012105809v1 1135045 0 - 1799296 I e chlSab2.chr21 5690926 0 + 127223203 I e cerAty1.NW_012000909v1 2482862 0 + 10077455 I e macNem1.NW_012011522v1 2762586 0 + 3123512 I e rheMac8.chr3 133450854 0 - 185818997 I e panTro5.chr1 126678267 19432 + 228573443 I a score=44487.000000 s hg38.chr14_KI270725v1_random 117214 3 + 172810 tAA s panTro5.chr1 126697699 3 + 228573443 TAA i panTro5.chr1 I 19432 C 0 s panPan2.chr7 74677938 3 + 162613886 taa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97393 3 + 126596 taa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44138255 3 - 99891981 TAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52368473 3 + 185818997 TAA i rheMac8.chr3 I 15376 C 0 s macFas5.chr3 125014166 3 - 192294377 TAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 361256 3 - 3123512 TAA i macNem1.NW_012011522v1 I 15238 C 0 s cerAty1.NW_012000909v1 7594923 3 - 10077455 TAA i cerAty1.NW_012000909v1 I 15561 C 0 s chlSab2.chr21 121532607 3 - 127223203 TAA i chlSab2.chr21 I 13537 C 0 s manLeu1.NW_012105809v1 664581 3 + 1799296 TAA i manLeu1.NW_012105809v1 I 29628 C 0 s colAng1.NW_012115910v1 5200843 3 - 6934359 TAA i colAng1.NW_012115910v1 I 13475 C 0 s calJac3.chr8 20075825 3 + 128169293 TAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17657477 3 + 18371965 TAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2191882 3 - 3566421 TAA i cebCap1.NW_016107540v1 I 9959 C 0 s aotNan1.NW_018514471v1 7390459 3 + 9267652 TAA i aotNan1.NW_018514471v1 I 9798 C 0 s otoGar3.GL873564 12711772 3 + 14340318 tga i otoGar3.GL873564 C 0 n 0 s canFam3.chr18 4099899 3 + 55844845 TAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 287216 3 - 1446996 TAA i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=14708421.000000 s hg38.chr14_KI270725v1_random 117217 1298 + 172810 TGCTAATCAAGCATAGTGGCTGTGTTTCTTGCTTCCTCTAGTCCGCAGGTAGAATACAAATGTAATAAACTACTT----ATTCATGTCACATCTATTTATTTTCTGCCTTATACCAAGCTTGTGGGATTCTCTTAAATACAACATTTTTATACT-----TACACCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGGGGAAATTGAGCCTCTGTAAGGTGGAGTAACTTCCTAAGATATAAAACTCAGCATTGAAATCTGTATACTTCAATATCCTGCGCTCTTCTCATTTGTCTTTACTATCTTTTA--TGTATG--TGTTAGATGTCCAATAAATTCTCTTT-TTTAAACTGAATTTAAGCCATGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTCCCTTTCATTTATGATCCTGTTCATGAAAAAGAGAAATTCTTTCATTGTGCTAGAAGCTTAAAATAAGGAAAATGCCACTTTCTACATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCATGAGACATACAAAACAAGTGG----GAAAGAAATCTAGTATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATGATTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCCAA-AAATGCTTCCTGCTAAAACATAAGCTCAGTCTGGCAGGAAAT-GCAGCTCACTTCATAAAGATTAATTGGTAGCTAAT-TTTGCATGCTGTTCTCTGAACT--TGAGTGAAACCTGTCCATCAGGCATACAGGGCATGATGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAACCTTCAAAGATGACCTGCCTTTTCTTTCAAATTCTTGATATCTTAATCAAGATATCATTAATTCATCTCTCTTTGCCCTTGGTTCAACATTGTGCTATACCAAAAC-TCATATAAAACAATGATCTAATATAATAAAAATGGCATTTTTCTTTGATGTAGATGCAAGCT-AACTGGCATTTTTACAATCC----ACATATTTCCTTTGTCAA--TTTTTCATTCTGTATTGGAAGTAATT----------------------------------------------GATAGGTATTTCTGAAGGGATGAAGGTGTTTCTGTGTTCATTGTGATCCAAAC--------TA--TTTTTAGACCTAGGGGCGTTTGTAAAACAATTTGTGCCAGCTGACCAAGGATCACTGTGGCAGAAAGCAGCAAATTTGCATAAGATGTCACTGCCTCATAAGTTGGCTTTGAAAACTAGGGGCTTA s panTro5.chr1 126697702 1295 + 228573443 TGCTAATCAAGCATAGTGGCTGTGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATACAAATGTAATACACTACTC----ATTAATGTCACATCTATTTATTTTCTGCCTTATACCAAGCTTGTGGGATTCTCTTAAATACAACATTTTTATACT-----TACACCTATGCAATATCCATTAGCATCGCCTTCCTAAATCAGGGGAAATTGAGTCTCTGTAAGGTGCAGTAACTTACTAAGATACAAAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTCTCATTTGTCTTTACTGCCTTTTC--TGTATG--TGTCAGATGTTCAATAAATTCTCTTT-TTTAAACTGAATTTAAGCAGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATTGGACACTCTTCCTCCCTTTCATTTATGATGCAGTTCATGAAAAAGAGAAATTCTTTCATTGTGCTAGAAGCTTAAAATAATAAAAATGCCACTTTCTACATTAAACAGAAACGGGAGGGAATCAAGAAGAATTGGATGAGACATAGAAAACAAGTGG----GAAATAAATCTAGTATAATTTCCCCTTTGTGTACCTGTGTTATTTAGCATTTGAGAAAATGTTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCCAA-AAATGCTTCCTGCTAAAACGTAAGCTCAGTCTGGCTAGAAAT-TAAGCTCACTTCATAAAAATTAGTTGGTAGCTAATCTTTGCATGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAACCTTCAAAGATGACCTGACTTTTCTTTCAAATTCTTGATATCTT----AAGACTTCATTAATTCATCTCTCTTTGCCCTTGGTTCAACATTGTGCTATACCAAAAC-TCATGTAAAACAATGATCTATTGTAATAAAAATGGCATTTTTCTTTCATGTAGATGCAAGCT-ATCTGGCATTTTTACAATCA----ACATACTTCCATTGTCAA--TTTTTCATTCTGTATTGGAACTAATT----------------------------------------------GATAGGTATTTCTGAAGGGACGAAGGTGTTTCTGTGTTCATTGTGATCCAAAC--------TT--TTTTTAGACCTATTGGTGTTTGTAAAACAATTTGTGCCAGCTGACCAAGGACCACTGTGGCAGAAAGCAGCAAACTTGCATAAGATGTCGCTGCCTCATCAGTTGGCTTTGAAAACTAGGGGCTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74677941 1294 + 162613886 TGCTAATCAAGCATAGTGGCTGTGTTTCTTGCTTCCTCTAGTCCGCAGGTAGCATACAAATGTAATAAACTACTA----ATTCATGTCACAACTATTTATTTTCTGCCTTATACCAACCTTGTGGGATTCTCTTAAATACAACATTTTTATACT-----TACACCTATGCAACACCCATTAGCATCGCCTTCCTAAATCAggggaaattgagcctctgtaaggtggagtaacttcctaagatataaaactcagcaTTGAAGTCTGTATACTTCAATATCCTGCCCTCTTCTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGATGTTCAATAAATTCTCTTT-TTTAAACTGAATTGAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTCCCTTTCATTTATGATCCTGTTCATGAAAAAGAGAAATTCTTTCATTGTGCTAGAAGCTTAAAATAATGAAAATGCCACTGTGTACATTAAACAGAAACTGCAGGGAGTCAAGGTGAATTGCATGAGACATAGAAAACAAGTGA----GAAAGAAATCTAGTATAATTTGCCCTTTGTGTACCTTTATTATTTAGCATTTGAGTAAATGATTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCACGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAATATTTCCCAA-AAATGCTTCCTGCTAAAACGTAAGCTCAGTCTGACTAGAAAT-GCAGTTCACTTCATAAAGATTAATTGGTAGCTAAT-TTTTCATGCTGTTCTCTGAACT--TGAGAGAAACCTGTCCATCAGGCATACAGGGAATGACTGAAAAGGTGACAATGGAAGATGAATGCTATGTCACTAACCTTCAAAGACGACCTGCCTTTTCTTTCAAATTTTTGATATCTT----AAGACTTCATTAATTCATCTCTCTTTGCCCTTGGTTCAACATTGTGCTATACCAAAAC-TCATGTGAAACAATGATCTAATGTAATAAAAATGGCATTTTTCTTTCATGTAGATGCAAGCT-AACTGGCATTTTTACAATGC----ACATATTTCCTTTGTCAG--TTTTTCATTCTGTATTGGAAGTAATT----------------------------------------------GGCAGGTATTTCTGAAGGCATGAAGGTGATTCTGTGTTCATTGTGATCCAAAC--------TA--TTTTTAGACCTAGGGGCGTTTGTAAAACAATTTGTGCCAACTGACCAAGGATCACTGTGGGAGAAAGCAGCAAACTTGCATAAGATGTCACTGCCTCATAAGTTGGCTTTGAAAACTAGGGGCTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 97396 1282 + 126596 TGCTAATCAAGCATAGTGGCTGTGTTTCTTGCTTCCTCTAGTCCGCAGGTAGCATACAAATGTAATAAACTACTT----ATTCATGTCACATCTATTTATTTTCTGCCTTATACCAAGCTTGTGGGATTCTCTTAAATACAACATTTTTATACT-----TACACCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGGGGAAATTGAGCCTCTGTAAGGTGGAGTAACTTCCTAAGATATAAAACTCAGCATTGAAGTCTGT-TACTTCAATATCCTGCCCTCTCCTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGATGTTCAACAAATTCTC-TT-TTAAAACTGAATTTAAGCCATGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTCCCTTTCATTCATGATGCAGTTCATGAAAA--GAGATTTCTTTCATTGTGCTAGAAA-GTAAAATAATGAAAATGCCACTTTCTACATTAAACAGAAACTG-AGGGAATCAAGGTGAATTGCATGAGACATAGAAAACAAGTG-----GAAAGAAATCTAGTATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAA-AAATGATACC-------------------CCCAAATATATTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCCAA-AAATGCTTCCTGCTAAAACGTAAGGTCAGTCTGGCTAGAAAT-GCAGCT-ACTTCATAAAGATTAATTGGTACCTAAT-TTTGCATGCTTTTCTCTGAACT--TGAGTGAAACCTGTCCATCAGGCATACAGGGAATGACAGAAAAGGTGACAACCGAAGATGAATGCTATGTCACTCACCTTCAAAGACGACCTGACTTTTCTTTCAAATTCTTAATATCTT----AAGACTTCATTAATTCATCTCTCTTTTCCCTTGGTTCAACATTGTGCTATACCAAAAC-TCATGTGAAACAATGATCTAATGTAATAAAAACGGCATTTTTCTTTCATGTAGATGCAAGCT-AACT-GCATTTTTACAACCC----ACACATTTCCTTTGTCAA--TTTTTCATTCTGTATTGGAAGTAATT----------------------------------------------CATAGGTTTTTCTGAAGGGATGAAGGTGTTTCTGTGTTCATTGTGAT-CAAAC--------TA---TTTTAGACCTAGGGGCGTTTGTAAAACAATTTGTGCCAGCTGACCAAGGATCACTGTGGCAGAAAGCAGCAAACTTGCATAAGATGTTACTGCCTCATAAGTTGGCTTTGAAAACTAGGGGCTTA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44138258 1293 - 99891981 TGCTAATCAAGCACAGTGGC--TGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATACAAACGTAATAAACTATTT----ATTAATGTTACATCTATTTATTTTCTGCCTTATACCAAGCTTGTGGGGTTATCTTAAATATAACATTTTTATACT-----TACACCTATGCAATACCCATTAGCATTGCCTTCCTAAATCAGAGGAAATTGAGCCTCTGTAAGGTGGAGTATCTTAGTAAGATACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTCCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGATGTTCAATAAATTCTCTTT-TTTAAACTGAATTTAAGCCGTGGAGCAGTGTTTTGTTTAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATCCAGTTCATGAAAAAGAGAAATTCTTTCATTGTGTTAGAAGCTTAAAATAATGAAAATACTACTTTCTACATTAAACAGAAACTGAAAGGAATCAAGGTGAATTGCAAGAGACATAGAAAACAAGTGG----GAAAGAAATCTAATACAATTTGCCCTTTGTATACCTTTATTATTTAGTGTTTGAGTAAATG-TTTC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAATAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATACTTTCTGCTAAAACATAAGCTCAGTCTGTCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCATGCTCTTCTCTGAACC--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAACCTTCAAATATGACCTTCCTTTTCTTTTAAATTCTTGATATATT----AAGACTTAATTAATTCATCTCTCTTTGCCCTTGGTTCAACGTTGTGCTATACCAAAAC-TCATGTAAAACAATGATCTAAGGTAACAAAAATGGCATTTTTCTTTCACGTAGATGCAAGCTAAACTGGCATTTTTACAATCA----ACATAGTTTCTTTATCAA--TTTTTCATTCTGTATTGGAAGTAATT----------------------------------------------GATAGGTATTTCTGAAGGGAAGAAAGTGTGTCTGTGTTCACTGTGATCCAAAC--------TT--TTGTTAGACCTAGTGGTGTTTGTAAAACAATTTGTGCCAGCTGACCAAGGACCACTGTGGCAGAAAGCAGCAAACTTGCATAAGGTGTCACTGCCTCATAAGTTGGCTTTGAAAACTAGGGGCTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52368476 1274 + 185818997 TGCTAATCAAGCAGAGTGGCTATGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAAC----T----ATTAACGTTACATCTATTTA-----TTCCTTATATGAAGCTTGTGGGGTTATCTTAAATATAACATTTTTATACT-----TACAGCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGAGGGAATTGAGCCTCTGTAAGGTGGAGTGAGTAACT----TACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGACGTTCAATAAATTCTCCTT-TTCAAACTGAATTTAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATACCACTTTCTCCATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCACGAGATACAGAAAACAAATGG----GAAAGAAATCTAATATAACTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATATTTCC-------------------CCCACATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAATGTAAGCTCAGTCTGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGGAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTCAAAGATGACCTTCCTTTTCTTTTAAATTCTTGATATCGT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTTCAACGTTGTTCTATACCAAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATGGCA-TTTTCTTTCATGTAGATGCAAGCT-AACTGACATTTTTACAATCA----ACATATTTCCTTTGTCAG---TTTTCATTCTGTATTGGAAGTAATT----------------------------------------------GATAGGTATTTCTGAAAGGATGAGGGTGTGTCTGTGTTCATTGTGATCCAAAC--------TT-TTTTTTAGACCTAGTGGTGTTTTTAAAACAATTTGTGAC-------CAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATAAGATGTCACTGCCTCACAAGCTGGCTTCGAAAACTAGGGGCTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125014169 1274 - 192294377 TGCTAATCAAGCAGAGTGGCTATGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAAC----T----ATTAACGTTACATCTATTTA-----TTCCTTATATGAAGCTTGTGGGGTTATCTTAAATATAACATTTTTATACT-----TACAGCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGAGGGAATTGAGCCTCTGTAAGGTGGAGTGAGTAACT----TACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGACGTTCAATAAATTCTCCTT-TTCAAACTGAATTTAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATACCACTTTCTCCATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCACGAGATACAGAAAACAAATGG----GAAAGAAATCTAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATATTTCC-------------------CCCACATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAACGTAAGCTCAGTCTGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTCAAAGATGACCTTCCTTTTCTTTTAAATTCTTGATATCGT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTTCAACGTTGTTCTATACCAAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATGGCA-TTTTCTTTCATGTAGATGCAAGCT-AACTGAcatttttacaatca----acatatttcctttgtcag---ttttcattCTGTATTGGAAGTAATT----------------------------------------------GATAGGTATTTCTGAAAGGATGAGGGTGTGTCTGTGTTCATTGTGATCCAAAC--------TT-TTTTTTAGACCTAGTGGTGTTTTTAAAACAATTTGTGAC-------CAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATAAGATGTCACTGCCTCACAAGCTGGCTTCGAAAACTAGGGGCTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 361259 1278 - 3123512 TGCTAATCAAGCAGAGTGGCTATGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAACTATTT----ATTAACGTTACATCTATTTA-----TTCCTTATATGAAGCTTGTGGGGTTATCTTAAATATAACATTTTTATACT-----TACAGCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGAGGGAATTGAGCCTCTGTAAGGTGGAGTGAGTAACT----TACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGACGTTCAATAAATTCTCCTT-TTCAAATTGAATTTAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATACCACTTTCTCCATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCACGAGATACAGAAAACAAATGG----GAAAGAAATCTAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATATTTCC-------------------CCCACATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAATGTAAGCTCAGTCTGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTCAAAGATGACCTTCCTTTTCTTTTAAATTCTTGATATCGT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTTCAACGTTGTTCTATACCAAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATGGCA-TTTTCTTTCATGTAGATGCAAGCT-AACTGAcatttttacaatca----acatatttcctttgtcag---ttttcattCTGTATTGGAAGTAATT----------------------------------------------GATAGGTGTTTCTGAAAGGATGAGGGTGTGTCTGTGTTCATTGTGATCCAAAC--------TT-TTTTTTAGACCTAGTGGTGTTTTTAAAACAATTTGTGAC-------CAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATAAGATGTCACTGCCTCACAAGCTGGCTTCGAAAACTAGGGGCTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7594926 1289 - 10077455 TGCTAATCAAGCAGAGTGGCTATGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAACTATTT----ATTAACATTACATCTATTTATTTTCTTCCTTATATGAAGCTTGTGGGGTTATCTTAAATATAACATTTTTATACT-----TACAGCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGAGGGAATTGAGCCTCTGTAAGGTGGAGTAACTTACT----TACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATA--TGTTAGACGTTCAATAAATTCTCTTT-TTCAAACTGAATTTAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATACCACTTTCTCCATTAAACAGAAACTGAAGGGAATCAAGGTCAATTGCACGAGATACAGAAAACAAATGG----GAAAGAAATCTAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAACGTAAGCTCAGTCTGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTTAAAGATGACCTTCCTTTTCTTTTAAATTTTTGGTATCAT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTTCAACGTTGTTCTATACCGAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATGGCA-TTTTCTTTCATGTAGATGCAAGCT-AACTGAcatttttacaatca----acatatttcctttgtcag---ttttcattCTGTATTGGAAGTAATT----------------------------------------------GATAGATATTTCTGAAAGGATGAGGGTGTGTCTGTGCTCATTGTGATCCAAAC--------TT-TTTTGTAGACCTAGTGGTGTTTTTAAAACAATTTGTGCCAGCTGA-CCAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATAAGATGTCACTGCCTCACAAGCTGGCTTTGAAAACTAGGGGCTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121532610 1336 - 127223203 TGCTAATCAAGCAGAGTGGCTATGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAACTATTT----ATTAACGTTACATCTATTTATTTTCTCCCTTATATGAAGCTTGTGGGGTTATCTTAAATATAACATTTTTATACT-----TACAGCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGAGGGAATTGAGTCTCTGTAAGGTGGAGTAACTTACT----TACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGACTTTCAATAAATTCTCTTT-TTCAAACTGAATTTAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATACCACTTTCTCCATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCACGAGATACAGAAAACAAATGG----GAAAGAAATCTAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTGTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAATGTAAGCTCAGTCTGGTTAGAAAT-TAAGTTCCATTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGATGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTTAAAGATGACCTTCCTTTTCTTTTAAATTCTTGATATCGT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTTCAACGTTGTTCTATACCAAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATAGCA-TTTTCTTTCGTGTAGATGCAAGCT-AACTGACATTTTTACAATCA----ACGTATTTCCTTTGTCAG---TTTTCATTCTGTATTGGAAGTAATTGATAGGTATTTCTGAAAGGATGAGATAGGTATTTATGAAAGGATGAGATAGGTATTTCTGAAAGGATGAGGGTGTGTCTGTGTTCATTGTGATCCAAAC--------TT-TTTTTTCGACCTAGTGGTGTTTTTAAAACAATTTGTGCCAGCTGACCAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCGTAAGATGTCACTGCCTCACAAGCTGGCTTTGAAAACTAAGGGCTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 664584 1286 + 1799296 TGCTAATCAAGCAGAGTGGCTATGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAAC----T----ATTAACGTTACATCTATTTATTTTCTTCCTTATATGAAGCTTGTGGGGTTATCTTAAATATAACATCTTTATACA-----TACAGCTATGCAATACCCATTAGCATCGCCTTCCTAAATCAGAGGGAATTGAGCCTCTGTAAGGTGGAGTAACTTACT----TACAGAACTCAGCATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGACGTTCAATAAATTCTCTTT-TTCAAACTGAATTTAAGCCGTGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATACCACTTTCTCCATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCACGAGATACAGAAAACAAATGG----GAAAGAAATCTAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCGTTTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATGAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAACGTAAGCTCAGTCTGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTTAAAGATGACCTTCCTTTTCTTTTAAATTTTTGGTATCAT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTCCAACGTTGTTCTATACCAAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATGGCA-TTTTCTTTCATGTAGATGCAAGCT-AACTGACATTTTTACAATCA----ACATATTTTCTTTGTCAG---TTTTCATTCTGTATTGGAAGTAATT----------------------------------------------GATAGGTATTTCTGAAAGGATGAGGGTGTGTCTGTGCTCATTGTGATCCAAAC--------TT-TTTTTTAGACCTAGTGGTGTTTTTAAAACAATTTGTGCCAGCTGACCAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATAAGATGTCACTGCCTCACAAGCTGGCTTCAAAAACTAGGGGCTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5200846 1294 - 6934359 TGCTAATCAAGCAGAGTGGCTGTGTTTCTTGCTTCCTCTAGTCTGCAGGTAGCATAGAAATGTAATAAACTATTT----ATTAACGTTACATCTATTTATTTTCTTCCTTATACCAAGCTTGTGGAGTTATCTTCAATATAATATttttatact-----tacacctatgcaatacccattagcatcaccttcctaaatcagaggaaattgagcctctgtaaggtggagtaacttactaagatacagaactCAGCATTAAAGTCTGTATACTTCCATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTATG--TGTTAGACGTTCAATAAATTCTCTTT-TTCAAACTGAATTTAAGCCGTGGAGCAGTGTTTCGTTGAACAATAAATATGATATAGGACACTCTTCCTACCTTTCATTTATGATTCAGTTCATGAAAAAGAGAAATTCTTTCATTGTCCTAGAAGCTTAAAATAATGAAAATGCCACTTTATCCATTAAACAGAAAGTGAAGGGAATCAAGGTGAATTGCACAAGATACAGAAAACAAGTGG----GAAAGAAATCTAATATAATTTGCCCTTTGTGTACCTTTCTTATTTAGCATCTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATGAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--CATAAACATTTCCTAA-AAATGCTTCCTGCTAAAGCGTAAGCTCAGTCTGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCAAGCTGTTCTCTGAACT--TGAGTGAAAGCTCTCCATCAGGCATACAGGGAATGACGGAAAAGGTGACAACAGAAGATGAATGCTATGTCACTAAACTTCAAAGATGACCTTCCTTTTCTTTTAAATTCTTGATATCAT----AAGACTTAATTAATTCATCTGTCTTTACCCTTGGTTCAACGTTGTTCTATATCAAAAC-TCATGTAAAACAATGATCTAATGTAATAAAAATGGCC-TTTTCTTTCATGTAGATGCAAGCT-AACTGACATTTTTACAATCA----GCATATTTCCTTTGTCAA---TTTTCATTCTGTATTGGAAGTAATT----------------------------------------------GATAGGTATTTCTGAAAGGTTGAAGATGTGTCTGTGTTCATTGTGATCCAAAC--------TT-TTTTTTAGAACTAGTGGTGTTTTTAAAACAATTTGTGCCAGCTGACCAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATGAGATGTCACTACCTCTCAAGCTGGCTTTGAAAACTAGGGGCTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20075828 1280 + 128169293 TGCTAATCAAGCGGAGTGGCTGTATTTCTTGCTTCCTCTAGTTTGCAGGTAGCGAACAAATGTAATAAACTATTT----ATTAATGTTACATCTATTTATTTTCTGCCTTGTACAGAGCTTGCAGGGTTATCTTAACTATAACATTTTTATACT-----TATACCTTTGCAGT-CCCCTTAGCATCGCCTTCCTGAATCAGAGGAAATCCAGCCTCTGTAAGGTGGAGTAACTGACTGTGATACAGAACTCCACACTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTCA--TGTGTG--TGTTTAATGTTCAATACATTCTTTTT-TTAAAAATGAATTTAAGCCATGGAGTGGTGTTTTGTTGAACAATAAATATGATATAGGAAACTCTTCCAACCTTTCATTTATGATCCAGTTCATAAAACAAAGAAATTCTTTTATTGTGCTAGAAGCTTAAAATAATGAAAATGCCACTTTCTACATTAAACGGAAACTGAAGGGAATCAAGGTGAATTGCCTGAGCTATAGAAAACGAGTGG----GAAAGAAGTCGAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCTTTTGAGTAAATATTTCC-------------------CACAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAC--AATAAATTTTTCCTAA-AAATGCTTCCTGCAGAAACGAAAGCTGAGTCATGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCATGCTATTCTCTGAACT--TGAGTGAGAGCTGTCCATAAGGCATACAGGGAATGATGGAAAAGATGACAAAAGAAGATGAATGCTATGTCACTAACCTTCAGAGATGACCTCCCTTTACTTTTCAATTCCTGATATGTT----AAGACTTAATTATTTCATCTCTCTCTGCCCTTGGTTCAAAGTTATGCTATACCAAAAC-TCATGTAAAATAATTATCTACTATAATAAAAATGGCATT-----------TAGATGCAAGCT-AACTGGCATTATTACAATCA----ACATCGTTCTTTTGTCAG--TTTTTCATGTTGTATTGGATGTAATT----------------------------------------------GATAGGTATTTATAAAGGGATGTAGGTGTATCTGCATCCATTGTGATCCAAAA------------TTTTTGGACCTAGTGATGTTTTTAAAATAATTTGTGCCAGCTGACCAAGGACCACTGTGCCAGAAAGCAG-CAACTTGCATGAGATGTCACTGTCTCATAAGATGGCTTTGAAAACTAGAGGTCTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17657480 1291 + 18371965 TGCTAATCAAGCAGACTGGCTGTGTTTCTTGCTTCCTCTAGTTTGTAGGTAGCAAACAAAGGTAATAAACTATTT----ATTAATGTTACATCTATTTATTTTCTGCCTTGTGCAAAGCTCGCAGGGTTATCTTAAATATAACATTTTTACACT-----TATACCTTTGCAAT-CCCCTTAGCATCGACTTCCTAAATCAGAGGAAATCCAGCCTCTGTAAGGTGGAGTAGCTTACTATGATACAGAACTCCACATTAAAGTCTGTAAACGTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTA--TGTGGG--TGTTAGCTGTTCAATAAATTCTCTTT-TTTAAAATGAATTTTAGCCACGGAGTGGTGTTTTGTTGAACAATAAATATGATATAGGAAACTCTTCCTACCTTTCATTTATGATCCAGTTCATGAAAAAAAGAAATTCTTTTATTGTGCTAGAAGCTTAAAATAATGAAAATGCCACTTTCTACATTAAACAGAAACTGAAGGGAATCAAGGTGAATTGCCTGAGCTGTAGAAAACAAGTGG----TAAAGAAATCGAATATAATTTGCCCTTTGTGTACCTTTATTATTTACCTTTTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTAG-------ACGTTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--GATAAACTTTTCCTAA-AAATGCTTCCTGCAGAAACGTAAGCTGAGTCATGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTAATCTTTGCATGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATCAGGCATACAGGGAATGATGGAAAAGATGACAAAAGAAGATCAATGCTATGTCACTAACCTTCAGAGACAACCTTCGTTTACTTTTCAATTCCTCATATCTT----AAGACTTAATTATTTCATCTCTCTCTGCCGTTGGTTCAAAGTTATGCTATACCAAAAC-TCATGTAAAATAATTATCTACTGTAATAAAAACGGCATTTTTCTTTCATGTAGATGCAAGCC-AACTGGCGTTGTTATAATCC----ACGTAGTTCCTTTGTCAG--TTTTTTATGTTGTATTGGATGTAATT----------------------------------------------GATAGGTATTTCTAAAGGGATGTAGGTGTATCTGTGTCCACTGTGATCCAAAA------------CTTTTGGACCTAGTGATGTTTTTAAAAT-ATTTGTGCCAGCTGACCAAGGACCACTGGGCCAGAAAGCAGCCAGCTTGCATGAGATGTCACTGTCTCCTAAGCTGGCCTTGAAAACTAGAGGTCTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2191885 1295 - 3566421 TGCTAATCAAGCACAGTGGCTGGGTTTCTTGCTTCCTCTA-TTTGCAGGTAGCGAACAAATGTAATAAACTATTT----ATTAATGTTACATCTATTTATTCTCTGCCTTGTACAAACCTTGCAGGGTTATCTTAAATATAACATTTTTATACT-----TATACCTTTGCAAT-CCCCTTAGCCTCGCCTTCCTAAATCAGAGGAAATCCAGCCTCTGTAAGGTGGAGTAGCTTATTATGATACAGAACTTCACATCAAAGTCTGTGTACTTCAATATCCTGCCCTCTTTTCATTTGTCCTTACTGCCTTTTA--TGTGTG--TGTTCGATGTTCAATAAATTCTCTTT-TTTAAAATGAGTTTAAGCCACGGAGCAGTGTTTTGTTGAACAATAAATATGATATAGGAAACTCTTCCTACCTTTCATTTATGATCCAGTTCATGAAAAAAAGAAATTCTTTCATTGTGCTAGAAGCTTAAAATAATGAAAATGCCACTTTCTGCATTAAACAGAAACGGAAGGGAATCAAGGTGAATTGCCTGAGCTATAGAAAACAAGTGG----GAAAGAAATCGAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCTTTTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------CATCTT-----AATTCATGTCTATAAAGTGG-------ACATTTATGTCTCACCTTGTCAAGAAGGGCAAACTCTAA--GATAAACTTTTCCTAA-AAATGCTTCCTGCAGAAACGTAAGCTGAGTCATGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTGGCTAATCTTTGCATGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATAAGGCATACAGGGAATGATGGAAAAGATGACAAAAGAAGATGAATGCTGTGTCACTAACCTTCAGAGATGACCTTCCCTTACTTTTCAATCCCTGATATCTT----AAGACTTAATTATTTCATCTCCCTCTGCTGTTGGTTCAAAGTTATGCTATACCAAAAC-TCATGTAAAATAATTATCTACTGTAATAAAAATGGCAATTTTCTTTCATGTAGATGCAAGCT-AACTGGCATTGTAACAATCAACATACGTAGTTCCTTCGTCAG--TTTTGCATGTTGTATTGGATGTAATT----------------------------------------------GATAGGTATTTCTAAAGGGATGTAGGTGTATCTGTGTCCATTGTGATCCAAGA------------TTTTTGGACCTAGTGATGTTTTTAAAATAATTTGTGCCATCTGACCAGGGACCACTGTGCCAGAAAGCAGCAAACTTGCATGAGATGTCACTGTCTCATAAGCTGGCTTTGAAAACTAGAGGTCTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7390462 1294 + 9267652 TGCTAATCAAGCAGAGTGGCTGTGTTTCCTGCTTCCTCTAGTTTGCAGGTAGCAAACAAATGTAATAAACTATTT----ATTAATGTTACATCTATTTATTTTCTGCCTTGTACAAAGCTTGCGGGCTTATCTGAAATATAACATTTTTATACT-----TATACCTGTGCAAT-CCCCTTAGCATCGCCTTCCTAAATCAGAGGAAATCCAGCCTCTGTAAGGTGGAGTAACTTACTATGATACAGAACTCCACATTAAAGTCTGTATACTTCAATATCCTGCCCTCTTTTCATTTGTCTTTACTGCCTTTTATGTGTGTG--TGTTAGATGTTCAATAAATTCTCTTT-TTTAAAATGAATTTAAGCCATGGAGTGGTGTTTTGTTGAACAATAACTATGATATAGGAAACTCTTCCTACCTTTCATTTATGATCCAGTTCGTGAAAAAAAGAAATTCTTTCATTGTGCCAGAAGCTTAAAATAATGAAAATGCCACTTTCTACATTAAGCAGAAACTGAAGGGAACCAAGGTGAATTGCCTGAGCTGTAGAAAACAAGTGG----GAAAGAAATCGAATATAATTTGCCCTTTGTGTACCTTTATTATTTAGCTTTTGAGTAAATATTTCC-------------------CCCAAATATCTTC-------C---------------TATCTT-----AATTCATGTCTATAAAGTAG-------ATATTTATATCTCACCTTGTCAAGAAGGGCAAACTCTAA--GATAAACTTTTCCTAA-AAACGCTTCCTGCAGAAACGTAAGCTGAGTCAGGCTAGAAAT-TAAGTTCCCTTCATAAAGATTAATTGGTAGCTACTCTTTACATGCTGTTCTCTGAACT--TGAGTGAAAGCTGTCCATAAGGCATACAGGAAATGATGGAAAAGATGACAAAAGAAGATGAATGCTATGTCACTAGCCTTCAGAGATGACCTTCCTTTACTTTTCAATTCCTGATATCTT----AAGACTTAATTATTTCATCTCTCTCTGCCCTTGGTTCAAAGTTATGCTACACAAAAAC-TCACGTAAAATAATTATCTACTGTAATTAGAATGGCGTTTTTCTTTCATGTAGATGCAAGCT-AACTGGCATTGTTACAATCA----ACATAGTTCCTTTGTCAG--TTTTTCATGTTGTATTCGATGTACTT----------------------------------------------GATAGGTATTTCTAAAGGGAGGTAGGTGTATCTGTGTCCACTGCGGTCCAAAA------------TTTTTGGACCTAGTGATGTTTTTAAAATAATTTGTGCCAGCTGACTAAGGACCACTGTGCCAGAAAGCAGCAAACTTGCATGAGATGTCACTGTCTCATAAGCTGGCTTTGAAAACTAGAGGTCTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1628911 1266 - 14340318 TGCTAATCGAGGAGAGTGGCTGGGCTTCTTCTTCTCTCCTGTACATAGTGAACAAAGGAA---AAAAAACAATGT----TTTAAAGTT-CATCTATTTATTGTCTGGCTTGTACAAAGCTTGTGGAGTTATCTTAAATATAAAATTTTTATACT-----GATGTTTCTATGATACCCATTAGCGTCCCTTTCCTAAATCAGGGGAAACTGAGCCTCTGTAAGGTGGCAGAACTTAACGAGATACAGAACTCAGCATTACAGCCTATATGATTCCAGGGCCTGC-CTCTTTCCATTTGTTTTTACTGCCTTTTA--TGTGTGTATGTCGTATGTTCAATAAATTCTCTTTCCTTAAACTGAATTGAAGCTGCAGAGCAGTGTTTTGTAGAACAATAAATATGATATAGGATACTCTTCCTACCTTTCTGTTATGGCCCAGTTCATGGATAAAAGAAATTCTTTCATAGTGCTAGAAGCTTAAAATAATGAAAATGGCATTTTCCATATTAACTGGAAACTGAAGAGAATCAAGGTGGATTGCTCGAGGTGTAGATAGATGATGG----GTAAGAAATTGAATACAATTTTCCTTCTGTGTCCACTTATTATTTATCTTTTGAGTAAACATTT-------------------------------TTC-------T---------------CATCTT-----AGT-----TCTATAAAATAA-------ATGTTTATGTCTCACGTTGTTGAGAAGGGCTCACTCTAA--CA-AAACATTTCCTGC-AAATACCTCTTGCAAATGCATGAGCTGAGCTTTGCTAGAAATGGAAGTTCCCTCCATAAGCGCTAACTGGAAGCTGGTCATGCCAGGATGTTTTCTGAAC----GAGGAAAAT---TCCAT----TACAAAGTGAATG-TGGAATGGGTGAGGACAGAAGAAAAATGCTACACCAATAACCTGCATAGATGA-CTCTCTCCTCTTTTCAATTAC-AATATATT----AAGAATTAATAATTTCATCTCTCTTTGCCCTTGGCTCAAAACTACAGTACAGCAAAAC-TTCTGTAAAACAATTCTGTAATATAATAAAAAGGGCATTTTTCTATCATGTAGATCCAAGCT-----GACACTTTTATAGGCA----ATTTACTTCCTTTGTCAA--TTTTTCATGTTGCATAGTAAATAACT----------------------------------------------GATA-ATATTTCTAAAGGGAAGTAATTGTATCCGTAGTCATTGTAATCCGATCATTTTTTTTT-TTTTTTACACC-AGCAAT-TCTTGAACATAATTTACCCAAGCTGGACAATGTTCACTGTGCAACAAAATACTAAGCTTGCATAAGATGTTGCTGTCTTACAGATTGGCTTTGAAAATTATGGGCCTA i otoGar3.GL873564 I 30743 C 0 s canFam3.chr18 4099902 1237 + 55844845 TCCCAGTAAAGCACAGTGGCTGTGTATCTGGCTTCATCC--TCAGTAGATACTGTGCAAATGTAATACACTATTTATTAATTAATATTACATCTATCTATTTCCTGGCTTTTACTAATCTT-TGTAGTTATCTT-AATATCAAAT-TTTATATTTATAATACACCTGTATAAC-CCCATTAGCATCCCCATCTTACTTTGAAGGAATTTTAGCCTCCACAGGGCAAAGTAACTTA--GAGAGAGAGAACTCAGCATTAAATTCTATATAACTCAAGATCCTCCCTTCTTTCCATTT-TCTTTATTGCCTGTAG--TGTATG--TGCTATATGTTCAATAAATTCTCTTTCTTTAAATTGAATTTAACCTGAGAAGCAATGTTTTGTTGAGCAATAAATATGATATAAGACACTCTTCCTACTTTTCAGTTATGATACAGTTCATGGGGAA---AAATTATTTCATTATGCTGGAAACTTAAAATAATGAACATGATACTTTCCATGTTAACTAAAAACTGAAGAAAATCAAGTTGAATTACATAAGGTAAAACAAGCAAGTGGAAAAGGAAGGAATTGAATATAACATGTCCTTTGCACTCCT-TATT-TTTAGCTTTCGAATAAATGTTTT----------------------------TCTTCCAGTGGAC---------------TACCTT-----AATCCATGTCCGAAATATAT-------ACTTCTGTGTCTTCTCTATTTAAGACATGTTCACTCTAA--TACAAACATTTCCTA--AAATGAATCTTTCAAATGGATGAACTGAGTCTACTTAG-AAT-GAAGTCCCCTCCATAATGCTTAATTGATAGCTAGTCATTATA---TGTTCTGTGAGCT--TGAGTGACAGCTGTACAT-----------GGAATGATGGAAAATGTGACAACAGATGATAAATGCTACATCAATAACCTTCAAAGTTGACCTTCCTTCTCTTTTAAATTTCTCATATTTT----AGGATTTAATTTCTTCATCTCTCTTTGCTTTTGTTCCAAAATTATGATGTACTAAAACATCATGCAACACAATTATAGACTGTAA--AAAAAGACATTTTTCTTTCACATAGAATCAAGCT-AACTGGATTTTCAATAGCCC----ATATA-TTCCTTTGTAAGTTTTTTTCATTTTCAATTGGAAATCTTT----------------------------------------------AATA-ATATTTCTGAAGGGATACAGATATGCCTGTGCTCATTATGA---AAAC--------AA--TTCCTG-----------------AAAACAATCTGT-------------------CCATGCTAGAAAACAGTAAGCCTACATAAGGTGCTGCTGTCTTATAAATTGACTTTGAAAATTATAGGCTTA i canFam3.chr18 C 0 I 1236 s dasNov3.JH578441 287219 1329 - 1446996 TACTGAGAAAGTACAGTGACTGTGTTTCATTTTTCCTCTAATCAGTATATAATATACAAATATAATAAAC----T----ATTAATGTTGCATCTACTTATTCCTGGCCCTTACCAAACTTTGTG---TTACCTTAAACAT-ATATTTTCGTACTTATAATACACATATATGATATTCATTCATATCCCTATCTTAGA-AAGGGGAAATTGTGCCTCTGTAAGGTGATGTAACTTCCc-agatacagaactcagcattaaagtctgtctaactcaagatcctgccctctctccattcat-tgtactgcctTTTA--TGTATA--TG-------TTCAATAAAGTTGCTTCATTTAAATTGAATTTAAACAGTGTAGTAGTGTTTTGCTGAACAATAGATACAATATACAATGCCCTTTCTACTTTT-GGTTATGATTCAGTTCATTGACAACGAAAGT--TTTCATTGTTCTAGAAGTTTAAAATAAAGAAAATGGCACTCTCCATGTTAACCAGAAACTGCAGAAAATCAAAATGGATTGCACATGATAGAGAAAGCAAGTAC----TAAAGTAACTGAGTATAATTTACCCTTTATGTTCCCTTATAATACAGCTTTAAGAGAAATATTTTTTCGTAAAGGAATTCCATAACCCAAATCTCTAT-------TATATATGCCCAAGAGCAGTTTCAACAAATAAATGAGCATAAATTAATCATTGCTCATTCATGTCACATTTCAGTATAAAATTC-CACTCTAAATTATAAGCATTCCCTAAGAAATGCATCTTTCAAATGCATGTGCTGAGTCTTGCTAGAAAG-AAAGTTTCCTCCATAATGATTAGTTGTTAGCTAGTCATTACATGCTGTTCTCTGAATTTATGAGTGAAAGTTGTCCATAAGGCATACATGGGATGATGGGAAAGGTGACAACAGAAGATGAACACCTAGTCAATAACCTTCAAAGATGGCCTTCCTTCTCTTCTCAATTCCTGAGCCCTTAAC-AAAACTTAATCCGTTCATTGCTCTTTGTCCTTGGTTCAAAGTTGTAATGCATCATA---CTGTGCAGAACAATTACGTAATGCAATAAAAAGGACATTTTTCTTCCATGGAGATCCAAACT-ACCTGGTGTTTCTACAGTCA----ATATATTTCCTTTGTCAT--GTTTTCATGTTGTTTTGGAAGTCATT----------------------------------------------GATA-GTATTTCTAAAGGGATATGTATGTGGCTGTTTTTATTGTGACCCATAT--------ACAATCTTTAGACCCAATGAT-TTCTGAAAACAATTTGGCCAAGCTGACCAA-AATCACTATTCCAGAAAGCTGTGAGTTTTCACAATATACTGTACCCTTATACATTGGCTT-GAAAATTATAGCCCTG i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=6221966.000000 s hg38.chr14_KI270725v1_random 118515 602 + 172810 CTCTATAGTCTTATGAATCAAAGGCATTGATAGatgtagtataagattacaatcatactttccttttgacagtcacattataaagcatgatgtattgcaattaatc---tcaattagctgatcacaattaaaattaataat---gtttattattgctgataaacaa-------tcatgactctcctgttctcaaatgtgcaaataattcttgtaattttaatacaaatttgcatattattattaattgatttaatct---------cattgcat-----ttggttc-atggatccaatttattaaaatATTGATAATGGGATAATGATTtgtttccccacttcatgtacactaaaa---acaattcttacaatggtctgcaaccc--catcatgatctg--cctcatgttaaccgccaaaat---tcttttatatcttcacccttgatcttaccagtggtcctggccacctcactgtcctctggacatgccaa---cacg--ctgctgccttatgaccaagactctagttaatttcttggcttggaaagatag----ccctccatatatccattgatcagctcattcaacttcctcaagtctttactgaaacttcacattctcgatgaggccta-------------ttcagtatttcaaac s panTro5.chr1 126698997 603 + 228573443 GTCTATAGTCCTATGAATCAAAGACATTGATAGATGTAATTTAAGATTACAATCATATTTTCCTTTTGACAGTCACATTCTAAAGCATGAGGTATTGCAATTAATC---TCAATTAGTTGATGACAATTAAAATTAATA-----GTTTATTattgctgataaaaaa-------tcatgactctcctgttctcaaatgtgcaaggaattcttgtaattttaatacaaatttgcatattattactaattgatttaatct---------catcgtgt-----ttggttc-atggatccaatttgttaaaatATTGATAATGGGATAATGATTtgtctccccatttcatttacactaaaagacacaattcttacaatggtctgcaagcc--catcgtgatctg--cggcatgttaaccgccaaaat---tcttttatgtcttcacccttgatcttaccagtggtcctggccacctcactgtcctctgtacatgccaa---catg--ctgctgtcttatgatcaagactctagttaatttcttggctttgaaagataa----ccttccatatatccattgatcagctcattcaacttcctcaagtctttactgaaacctcacattctcgatgagacctA-------------TTCAGTATTTCAAAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74679235 604 + 162613886 CTCTATAGTCTTAAGGATCAAAGACATTGATAGatgtagtataagattacaatcatattttccttttgacagtcacattataaagcatgatgtattgcaattaatc---tcaattagctgatcacaattaaaattaataat---gtttattattgctgataaacaa-------tcatgactctcctgttctcaaatgtgcaagtaattcttgtaattttaatacaaatttgcatattattattaattgatttaatct---------cattggat-----ttggttc-atggatccaatttattaaaatattgataatgggataatgatttgtctccgcatttcatgtacactaaaa---agaattcttacactggtctgcaagcc--catcatgatctg--ccgcatgttaaccgccaaagt---tctttcatatcttcacccttgatcttaccagtggtcctggccacctcactgtcctctggacatgccaa---catagcctgctgccttatgaccaagactctagttaatttcttggcttggaaagatag----ccctccatatatccattgatcagctcattcaacttcttcaagtctttactgaaacctcacattctcgatgagaccta-------------ttcagtatttcaaac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 98678 603 + 126596 CTCTATAGTCTTATGAATCAAAGACATTGATAGatgtagtataagattacaatcatgttttccttttgacagtcacattataaagcatgatgtattgcaattaatc---tcagttagctgatcacagttaaaattaataat---gtttattattgctgataaa-aa-------tcatgactctcctgttctgaaatgtgcaagtaattcttgtaatattaatacaaatttgcatattattattaattgatttaatct---------cattggat-----ttggttc-atggatccaatttattaaaatattgataatgggataatgatttgtctccccatttcatgtacactaaaaacaacaattcttacaatggtctgcaagcc--catcatgatctg--ccgcatgttaaccaccaaaat---tattttatatcttcacccttgatcttaccagtggtccaggccaccttacggtcctctgg-catgccaa---aatg--ctgctgccttatgaccaagactctagttaatttgttggcttggaaagatag----ccctccatatatccattgatcagctcattcaacttcctcaagtctttactgaaatttcccattctcgatgaggccta-------------ttcagtatttcaaac i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44139551 601 - 99891981 CTCTATAGTCTTATGAATCAAAAACATTGATAGatgtagtgtaagattacaatcatattttccttttgacagtcacattataaagcatgatgtattgcaattaatc---acaattagctgatcacaattaa----aataat---gtttattattgctgataaacaa-------tcatgattctcttgttctgaaatgtgctagtaattcttgtaattttaattcaaatttgcatattattactaattgatttaatct---------cattggat-----ttggttc-atggatccaatttattaaaatattgataatgggataatgatttgtctccccatttcatttacactaaaagccacaattcttacaatggtctgcaagcc--catcatgatctg--ccccgtgttaaccaccgaaat---tcttttgtatcttcacccttgatcttaccagtggccctggccacctcactgtcctctgggcatgccaa---catg--ctgctgccttatgaccaaggctctagttaatttcttggcttggaaagatag----ccctccatatatccattgatcagcttattcaacttcctcaagtctttactgaaacctcacatactcaatgagaccta-------------ttcagtatttcaaac i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52369750 605 + 185818997 CTCTATATTCTTATGAATCAAAAACATTGACAGATGTAATATAAGATTACAATCATATTTTCTTTTTGACAGTCACATTATAAAGCATGATGTATTGCAATTAATC---TCAATTAGCTGAACACAAATAAAATTAATAAT---GTTTATTattgctgataaacaa-------tcatgactctcctgttctgaaacgtgcaagtaattcttgtaattttaatacaaatttgtatattgttactaattcatttaatct---------cactggat-----ttggttc-atggatccaatttattaaaatattgataatgggataatgatttgtctccccatttcatttacactaaaagccacaattcttacaacactctgcaagcc--catcatgatctg--actcatgctaactgccaaaat---tcctttatatcttcacccttaatcttaccagtggtcctggccacttcactgtcctctggacatgccaa---catg--ctgctgccttatgacccagactcttgttaatttcttggtctggaaagatag----ccctccatatatccatcgatcagctcattcaacttcctcaagtctttactgaaatctcacattcttaaggagacctA-------------TTCAGTATTTCAAAC i rheMac8.chr3 C 0 M 132 s macFas5.chr3 125015443 604 - 192294377 CTCTATATTCTTATGAATCAAAAACATTGACAGATGTAATATAAGATTACAATCATATTTTCTTTTTGACAGTCACATTATAAAGCATGATGTATTGCAATTAATC---TCAATTAGCTGAACACAAATAAAATTAATAAT---GTTTATTATTGCTGATAAACAA-------TCATGACTCTCCTGTTCTGAAACGTGCAAGTAATTCTTGTAATTTTAATACAAATTTGTATATTGTTACTAATTCATTTAATCT---------CACTGGAT-----TTGGTTC-ATGGATC-AATTTATTAAAATATTGATAATGGGATAATGATTtgtctccccatttcatttacactaaaagccacaattcttacaacactctgcaagcc--catcatgatctg--actcatgctaactgccaaaat---tcctttatatcttcacccttaatcttaccagtggtcctggccacttcactgtcctctggacatgccaa---catg--ctgctgccttatgacccagactcttgttaatttcttggtctggaaagatag----ccctccatatatccatcgatcagctcattcaacttcctcaagtctttactgaaatctcacattcttaaggagaccta-------------ttcagtatttcaaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 362537 605 - 3123512 CTCTATATTCTTATGAATCAAAAACATTGACAGATGTAATATAAGATTACAATCATATTTTCTTTTTGACAGTCACATTATAAAGCATGATGTATTGCAATTAATC---TCAATTAGCTGAACACAAATAAAATTAATAAT---GTTTATTATtgctgataaacaa-------tcatgactctcctgttctgaaacgtgcaagtaattcttgtaattttaatacaaatttgtatattgttactaattcatttaatct---------cactggat-----ttggttc-atggatcaaatttattaaaatattgataatgggataatgatttgtctccccatttcatttacactaaaagccacaattcttacaacactctgcaagcc--catcatgatctg--actcatgctaactgccaaaat---tcctttatatcttcacccttaatcttaccagtggtcctggccacttcactgtcctctggacatgccaa---catg--ctgctgccttatgacccagactcttgttaatttcttggtctggaaagatag----ccctccatatatccatcgatcagctcattcaacttcctcaagtctttactgaaatctcacattcttaaggagaccta-------------ttcagtatttcaaac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7596215 604 - 10077455 CTCTATATTCTTATGAATCAAAAACATTGACAGatgtaatataagattacaatcatattttccttttgacagtcacattataaagcatgatgtattgcaattaatc---tcaattagctgatctcaaataaaattaataat---gtttattattgctgataaacaa-------tcatgactctcctgttctgaaatgtgcaagtaattcttgtaattttaatacaaatttgtatattgttactaattcatttaatct---------cactggat-----ttggttc-atggatccaatttattaaaatattgataatgggataatgatttgtctccccatttcatttacactaaaagccacaattcttacaacattctgcaagcc--catcatgatctg--actcatgctaactgccaaaat---tcctttatatcttcacccttaatcttaccagtggtcctggccacttcactgtcccctggacatgccaa---catg--ctgctgccttatgacctagactcttgttaatttcttggtgtggaaagacag----ccctccgtatatccatcgatcagctcattcaacttcctcaagtctttactgaaatttcacattctcaa-gagaccta-------------ttcagtatttcaaac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121533946 604 - 127223203 CTCTATATTCTTATGAATCAAAAACATTGACAGATGTAATATAAGATTACAATCATATATTCTTTTTGACAGTCACATTATAAAGCATGATGTATTGCAATTAATC---TCAATTAGCTGAACACAAATAAAATTAATAAT---GTTTATTATTGCTGATAAACAA-------TCATGACTCTCCTGTTCTGAAACGTGCAAGTAATTCTTGTAATTTTAATACAAATTTGTATATTGTTACTAATTCATTTAATCT---------CACTGGAT-----TTGGTTC-ATGGATCCAATTTATTAAAATATTGATAATGGGATAATGATTtgtctccccatttcatttacactaaaagccacaattcttacaacactctgcaagcc--catcatgatctg--actcatgctaactgccaaaat---tcctttatatcttcacccttaatcttaccagtggtcctggccacttcactgtcctctggacatgccaa---catg--ctgctgccttatgacccagactcttgttaatttcttggtctggaaagacag----ccctccgtatatccatcgatcagctcattcaacttcctcaagtctttactgaaagttcacattctcaa-gagaccta-------------ttcagtatttcaaac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 665870 604 + 1799296 CTCTATATTCTTATGAATACAAAACATTGACAGatgtaatataagattacaatcatattttccttttgacagtcacattacaaagcatgatgtgttgcaattaatc---tcaattagctgatcacaaataaaattaataat---gtttattattgctgataaacaa-------tcatgactctcctgttctgaaatgtgcaagtaattcttgtaattttaataaaaatttgtatattgttactaattcatttaatct---------cactggat-----ttggttc-atggatccaatttattaaaatattgataatgggataatgatttgtctccccatttcatttacactaaaagccacaattcttaaaacattctgcaagcc--catcatgatctg--actcatgctaactgccaaaat---tcctttatatcttcacccttaatcttatcagtggtcctggccacttcactgtcctctggacatgccaa---catg--ctgctgccttatgacccagactcttgttaatttcttggtgtggaaagacag----ccctccgtatatccatcgatcagctcattcaacttcctcaagtctttactgaaatttcacattctcaa-gagaccta-------------ttcagcatttcaaac i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5202140 601 - 6934359 CTCTATATTCTTATGAATCAAAAACAATGACAGATGTAATATAAGATTACAATCATATTTTCCTTTTGACAGTCACATTATAAAGCATGATGTATTGCAATTAATC---TCAATTAGCTGATCACAAATAAAATTAATAA-------TATTattgctgataaacaa-------tcatgactctcctgttctgaaacgtgcaagtaattcttgtaattttaatacagatttgtatattgttactaattaatttaatct---------cactggat-----ttggttt-atggatccaatttattaaaatattgataatgggataatgatttgtctccccatttcatttacactaaaagccacaattcttataacactctgcaagcc--cataatgatctg--actcatgctaactgccaaaat---tcttttatatcttcacccttaatcttaccagtggtcctggccacctcactgtcctctggacatgccaa---catg--ctgctgtcttatgacccagactcttgttaatttgttggtctggaaagatag----ccctccatatatccatcaatcagctcattcaacttcctcaagtctttactgaaatctcacattctcaaggagaccta-------------ttcaatatttcaaac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20077108 598 + 128169293 CTCTGTATTCTTAGGAATCAAAAACATTGactgatgtagcataagattacaatcatattttccttctgacagtcacattataaagcatgatatactgcaattaatc---tcaattagctgatcacaattaaaattaataat---gtttatcattgctgat----aa-------tcatgactctcttgtcctgaaatgcgcaattaattcttatacttttaatacaaatttgtatattattactaattaatttaatct---------cattggat-----ttagttc-attgttccaatttactaaaatATTGATAATAGGAAAATTATTtgtctcctcatttcatttacactaaaagccatcattcctacaatggtatgcaagcc--c-tcatggtctg--tctcatgttaagtgccaaaac-----ttttatatcttcacccttgatcttacctgtggttctggcctcctcattgttctctggatatgccaa---catc--ttgctgccttatgatccagactttagttaatttcttggcttggaatgatag----gccttcatatatccattgatcagctcattcaacttcctcaagtctttactgaaacctcacattctcagtgagaccta-------------ttcagtatttcaaac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17658771 609 + 18371965 CTCTATATTCTTATGAATCAAAAACATTGACAGATGTAGCATAAGATTAAAATCATATTTTCCTTTTGACAGCCATGTTATAAAGCATGATGTATTGCAATTAATC---TCAATTAGCTGATCACAATTAAAATTAATAAT---GTTTATCATCACTGATAAACAA-------TCATGACTCGCTTGTCCTAAAATGTGCAATGAATTATTTTACGTTTAATACAGATTTGTATATTATTACTAATTAATTTAATCT---------CATTGGAT-----TTAGTTCTTTTTTTCCAATTTACTAAAATATTGATAATAGGATAATTATTtgtctcctaatttgatttacactaaaagctgtcattcctacaatggtctgcaagcc--cttcatgatctg--cctcatgtcaactgccaaaac---ttttttatatcttcaccctagatcttaccggtggtcctggcctcctcattgttctctggatatgccaacaccatc--ctgctgccttatcacccagactttagttaatttcttggcttggaatgatag----gccatcatatatacagtgatgagctcattcaacttcctcaagtctttactgaaacctcaaattctcaatgagaccta-------------ttcaatatttcaaat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2193180 605 - 3566421 CTCTATATTCTTATGAATCAAAAACATTGACAGatgtaggataagattacaatcatattttccctttgacagtcacattatacagcatgatatattgcaattaatc---tcaattagctaatcacaattaaaattaataat---gtttatcatcactgataaacaa-------tcatgactctcttgtcctaaaatgtgcaatgaattcttttacgtttaatacaaatttgtatattattactaattaatttaatct---------cattggat-----ttagttc-attgttccaatttactaacatATTGATAATAGGATAATTATTtgtctcctaatttcatttacattaaaagccatcattcctacaatggtctgcaagcc--cttcatggtctg--cctcatgttaactgccaaaac---ttttttatatcttcactctagatcttaccagtggtcctggcctcctcattgttgtctggatatgccaa---catc--ttgctgccttatgacccagactttagttaatttcttggcttggaatgatag----ggcttcatatatctattgatgagctcactcaacttcctcaagtctttactgaaacctcgcattctcaatgaggccta-------------ttcaatatttcaaac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7391756 605 + 9267652 CTCTATATTCTTATGAATCAAAAACATTGACAGatgtagcataagattacaatcatattttccttttgacagtcacattataaagcgtgatgtattgcaattaatc---tcaatgagctgataacaattaaaattaataat---gtttatcatcgctgataaacaa-------tcatgactctcttgtccttaaatgtgcaattaattcttatacttttaatgcaaatttggatattattactaattaatttaatct---------cattggat-----ttagttc-gttgttctaatttactaaaatATTGATAATAGGATAATTATTtgtctcctcatttcatttacactaaaagccatcattcctacaatggtctgcgagcc--cttcatggtctg--cctcatgttaactgccaaaac---tctttcatatcttcacccttgatcttactggtggtcctggcctcctcattgttctctggaaatgccaa---catc--ttgctgccttatgacccagactttagttaatttcttggcttggaatgatag----gccttcgtatatccattcatcagctcattcaacttcctcaagcctttactgaaacctcacattctcaatgagactta-------------ttcaatatttcaaac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1630177 620 - 14340318 GTCTATAATGTTGAGTGCTAGAAACATCGACAGatgtagcctgagattac-------cttttcctttgtcagtcacatcataatgcatgacatactgcaattggtctaattaaTTAGCTAATCTCAATTAAAACGAATACTTCAGTTTATCATTGCTGATAAACAATAAACAGTTACACATCTCATGTCCTAAAATCTGCAAGTGATTTTTGTAATGTAAATGAGTGTATGTATGTTATTTCTGATTAGTTTACTTTGGTCAGTTCCATTAAACTCAAGTTGGCTC-ATGGCTCTAACTTATTCAAATATTTACAAAGTGATGACAGTTTATcttcccatttcatttacagtaaaagccaaaattcttaagatgatctataaa--------atggccctacccccatgttaaatccccaaac---tcct------------------cctttgtacaggtcctggccaccactctgttctttgaacaggacaa---catg--ctcttgacataggcctcggtctccagccagtttcttgggcaggaatgatagatactcttccagaggcacacggacccactcctttcccttcctcaagcctccactctaatggatcctgctcagtaagacctactctgcgcaccagttctgcatctcaaac i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 288548 587 - 1446996 --------GCTTAAGT-TCTAAATTGTTATTGGatgtagcttaaattcac-accattatttttcttcatcagttacatcataatgcaaaagacattgcaattggta---tcaattaa------------gactctgagact---ttttatccatgctgtt--attg-------ccatgcctctccccttctgaaatttgccagtactttttagaa--ttaatcaaatgttgtatattatcactaataaagtccatct---------aatcagac-----ttggcac-atgattccaatttATTCTTCTCTTGATAATGAGATGATGATTtgcctctccatttcatttagagtaaaagtcaacatcattacgtctctctacaattcttcatcattgacc---tcccatgtaaacccctaaagctcctcttttctgtc-tcaaccttgatagtccttggagtgttggtctccctgctgcttcttgaccctaccag---cttg--ctgtcacctta------ggtgtctagctaattccttggccagaaatgatc-----tcccccatgtataacttcactggtttcttcactttcctcaaatcttcattccatgatcacattctcaatgagacctacattgtaaggta-ttcaagatttcaaac i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=396389.000000 s hg38.chr14_KI270725v1_random 119117 50 + 172810 tgcct-cccag-ctgcaactttcca-aaaccccttactc--ttctGTGTATtttt s panTro5.chr1 126699600 50 + 228573443 TGCCT-CCCAG-GTGCAACAGTCCA-AAACCCCTTGGTC--TTCTGTGTAttttt i panTro5.chr1 C 0 C 0 s panPan2.chr7 74679839 43 + 162613886 tgcct-cccag-ctgcaacagt--------ccctTAGTC--TTCTGTGTAttttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 99281 50 + 126596 tgcct-cccag-ctgcaacattcca-aaaccccttactc--ttctGTGTAttttt i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44140152 50 - 99891981 tgcct-cccac-ctacaacactcca-aaaccccttactc--ttctGTGTAttttt i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125016047 44 - 192294377 tgcct-cccag-ctgcaacactcca-------cttactc--ttctgtgtattttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 363142 44 - 3123512 tgcct-cccag-ctgcaacactccA-------CTTACTC--TTCTGTGTAttttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7596819 44 - 10077455 tgcct-cccag-ctgcaacactccA-------CTTACTC--TTCTGTATAttttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121534550 44 - 127223203 tgcct-cccag-ctgcaacactcca-------cttactc--ttctgtatattttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 666474 44 + 1799296 tgcct-cccag-ctgcaacactccA-------CTTACTC--TTCTGTGTAttttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5202741 44 - 6934359 tgcct-cccag-ctgcaacactccA-------CTTACTC--TTCTGTGTAttttt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20077706 50 + 128169293 tgcct-cccag-gtgcaacactcca-aaactccttactc--tgctGTGTAttttt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17659380 50 + 18371965 tgcct-cccgg-ctgcaacactcca-aaactccttactc--tgctGTGTAttttt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2193785 50 - 3566421 tgcct-cccag-ctgcaacactcca-aaactccttgctc--tgctGTGTAttttt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7392361 50 + 9267652 tgcct-cgcag-ctgcaacactcca-aaactccttactc--tgctGTGTGttttt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1630797 50 - 14340318 tgcca-ccctgactgcactgctccc--aacctcttgccc--tactGTGTACTCCT i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 289135 54 - 1446996 tgcctccccaa-tggcaacacttcccaaattacttaccctgttttgtGCATATTT i dasNov3.JH578441 C 0 I 14883 e ponAbe2.chrUn 5688366 5371 + 72422247 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e rheMac8.chr3 52370355 132 + 185818997 M a score=1204596.000000 s hg38.chr14_KI270725v1_random 119167 141 + 172810 taaaggatttattgagataaaatttacatagtgtagagtgcacacattaatgtctacaagtcagtgacttttagtatatgcacagataagtggagccatcatcacaatgaattttagagcattttcatcacttcaaaaaga s panTro5.chr1 126699650 141 + 228573443 gaaaggatttattgagatataatttacatactgtagagtgcacatattaatgtctacaagtcaatggcttttagtatatacacagataagtggagccatcatcacaatgaatttgagagcattttaatcacttccaaaaga i panTro5.chr1 C 0 C 0 s panPan2.chr7 74679882 141 + 162613886 gaaaggatttattgagatataatttacatactgtagagtgcacatattaatgtctacaagtcaatggcttttagtatatacacagataagtggagccatcatcacaatgaatattagagcattttcatcacttcaaaaaga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 99331 141 + 126596 gaaaggatttattgagatatagtttacatagtgtagagtgcacacattaatgtctacaagtcagtggcttttagtatatgcacagataagtggagccatcatcacaatgaattttagagcattttcatcacttcaaaaaga i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44140202 141 - 99891981 gaaaggatttagtgagatataatttacatagtgtagagtgcacacattaatgtgtacaagtcagtggcttttagtatatgcacagataagtggagccatcatcacaatgaattttagagcatttccatcacttcaaaaaga i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125016091 141 - 192294377 GAAAGGAtttattgagatataatttacatagcatagagtgcacacattaatgtgtgcaagtcaatggcttttagtatatgcacagataagtgaagccatcatcacaatgaattttagagcattttcatcacttcaaaaaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 363186 141 - 3123512 gaaaggatttattgagatataatttacatagcatagagtgcacacattaatgtgtacaagtcaatggcttttagtatatgcacagataagtgaagccatcatcacaatgaattttagagcattttcatcacttcaaaaaga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7596863 141 - 10077455 gaaaggatttattgagatataatttacatagcatagagtgcacacattaatgtgtacaagtcaatggcttttactatatgcacagataagtgaagccatcatcacaatgaattttagagcattttcatcacttcaaaaaga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121534594 141 - 127223203 GAAAGGAtttattgagatataatttacatagcatagagtgcacacattaatgtgtacaagtcaatggcttttagtatatgcacagataagtgaagccatcatcacaacgaattttagagcattttcatcacttcaaaaaga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 666518 141 + 1799296 gaaaggatttattgagatataatttacatagcatagagtgcacacattaatgtgtacaagtcaatggcttttagtatatgcacagataagtgaagccatcatcacaatgaattttagagcattttcatcacttcaaaaaga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5202785 141 - 6934359 gaaaggatttattgagatataaattacatagcatagagtgcacacattaatgtgtacaagtcaatggcttttagtatatgcacagataagtggagccatcaccacaatgaattttagaggattttcatcacttcaaaaaga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20077756 138 + 128169293 -aacaaacttattacgatattatttacat--cacacagttcacacattagagtgtacaagtcaacggtttttagtgtatgtacagataagtgcagccatgatcacaatgaattttagaacattttcatcacgtcagaaaga i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17659430 138 + 18371965 -aatgaacttattgtgatattatttacat--cacacggttcacacattaaagtgtacaagtcaatggtttttagcgtatgtacagataagtgcggccacgatcacaatgaattttagaacattttcatcacttcagaaaga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2193835 138 - 3566421 -aacgaacttattgtgatattatttacac--cacacagtacacacattaaagtgtacaagtcaatggtttttagtgtatgtacagataagtgcagccatgatcacaatgaattttagaacattttcatcacttcagaaaga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7392411 138 + 9267652 -aacgaacttattatgatattatttacat--cacacagttcacacattaaagtctacaagtcaatggcttttagtgtatgtacagataaatgcagccatgatcacaatgaattttagaacattttcatcacttcagaaaga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1630847 138 - 14340318 -ATAGGTCttattgggacataagtcacataccaaccaatccacacattaaaacaggcaagttgatggcttttagtatatgggtatataactgcagctatcattatcatccat-ttagagcattt-catctcctgaaacaga i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e rheMac8.chr3 52370355 132 + 185818997 M a score=672268.000000 s hg38.chr14_KI270725v1_random 119308 78 + 172810 --aaccccaccttctctagctgttaacatcctatacactcatcccctactcaatcctaagcaaccacaaatctgttttct s panTro5.chr1 126699791 78 + 228573443 --aaccccaccttccctagctgttaacttcctatgcactcatcccctactcaatcctaagcaaccacaaatctggtttct i panTro5.chr1 C 0 C 0 s panPan2.chr7 74680023 78 + 162613886 --aaccccaccttctctagctgttaacctcctatgcactcatcccctactcaatcctaagcaaccacaaatctgtttttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 99472 77 + 126596 --aaccccaccttctctagctgttaacctcctatgcacccat-ccctaatcaatcctaagcaaccacaaatctgttttct i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44140343 78 - 99891981 --aaccccaccttctttagctgttaacctcctatacgcccattccctactcaatcctaagcaatcacaaatctgttttct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52370488 78 + 185818997 --aaccccaccttctttaactgttcaactcctatgcacccatcccctactcaatcctaagcaaccccaactctgttttcc i rheMac8.chr3 M 132 I 2 s macFas5.chr3 125016232 78 - 192294377 --aaccccaccttctttaactgttcaactcctatgcacccatcccctactcaatcctaagcaaccccaactctgttttcc i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 363327 78 - 3123512 --aaccccaccttctttaactgttcaactcctatgcacccatcccctactcaatcctaagcaaccccaactctgttttcc i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 7597004 78 - 10077455 --aaccccaccttctttaactgttaaactcctatgcacccatcccctactcaatcctaagcaaccccaactctgtttacc i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 121534735 78 - 127223203 --aactccaccttctttgactgttaaactcctatgcacccatcccctgctcaatcctaagcaaccccaactctgttttcc i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 666659 78 + 1799296 --aactccaccttctttaactgttaaactcctatgcacccatcccctactcaatcctaagcaaccccaactctgttttcc i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 5202926 78 - 6934359 --aaccccaccttctttaactgttaaactcctatgcacccattccctacccaatcctaagcaaccccaaatctgttttcc i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 20077894 74 + 128169293 --aacctca---tgttaaactgttaaccttccatgcaccc-tcacctactcaatcctaagcaaccacaggtctgttttct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17659568 74 + 18371965 --agcctca---tgttaagccgttaaccttccatgtaccc-tcacctactcaatcctaagcaaccacagatctgttttgg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2193973 74 - 3566421 --aacctca---tgttaagctgttaaccttccatgcaccc-tcgcctactcactcctaagcaaccaccaatctgttttct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7392549 74 + 9267652 --aacctca---tcttaagctgttaaccttccatgcaccc-tcacctactcaatcctaagcaaacacaaatctgttttct i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1630985 77 - 14340318 caaccccta---ccgttgactttcaacctcctatgcagctagctcctgcccagccctaagaaaccacagatttcttctct i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=2574.000000 s hg38.chr14_KI270725v1_random 119386 1 + 172810 t s panTro5.chr1 126699869 1 + 228573443 g i panTro5.chr1 C 0 C 0 s panPan2.chr7 74680101 1 + 162613886 g i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 99549 1 + 126596 g i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44140421 1 - 99891981 g i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20077968 1 + 128169293 g i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17659642 1 + 18371965 g i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2194047 1 - 3566421 g i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7392623 1 + 9267652 g i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1631062 1 - 14340318 g i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e colAng1.NW_012115910v1 5203004 2 - 6934359 I e manLeu1.NW_012105809v1 666737 2 + 1799296 I e chlSab2.chr21 121534813 2 - 127223203 I e cerAty1.NW_012000909v1 7597082 2 - 10077455 I e macNem1.NW_012011522v1 363405 2 - 3123512 I e macFas5.chr3 125016310 2 - 192294377 I e rheMac8.chr3 52370566 2 + 185818997 I a score=1896552.000000 s hg38.chr14_KI270725v1_random 119387 192 + 172810 tctctatagactttactattc----tgttttcatctaaatagaat-catacaataggtggccttttctgcctg-g-----cttctttcagttggcataatgctatcaaggttcatgtacgtattggtactttatttctttttataaccgtataacattcaatttcatggatata--acattttatttatccaataatatttttat s panTro5.chr1 126699870 192 + 228573443 tctctgtagatcttcctattc----tattttcatctaaatagaat-catacaataggtggccttttgtgcctg-g-----cttctttcagttggcataatgctatcaaggttcatatgcgtattggtactttatttctttttataactgtataacattcaatttcatggatata--acattttgtttatccaataatatttttat i panTro5.chr1 C 0 C 0 s panPan2.chr7 74680102 191 + 162613886 tctctgtagatcttcctattc----tattttcatctaaatagaat-catacaataggtggccttttgtgcctg-g-----cttctttcagttgtcataatgctatcaaggttcatatgtgtattggtactttatttctttttaaaactgtataacattcaatttcacggatata--acattttgtttatccaataata-ttttgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 99550 192 + 126596 tctctatagattttcctagtc----tgttttcatctaaatagaat-catacaataggtggccttttgtgcctg-g-----cttctttcagttggcataatgctatcaaggttcatgtacgtattggtactttatttctttttataactgtagaacactcaatttcatggatata--acattttgtttatccaataacatttttat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44140422 190 - 99891981 tctctatagattttcctattc----tattttcatgtaaatagaat-catataataggtggccttttgttcctg-g-----cttctttcagttagcataatgctatcaaggttcatatatgtattggtactttatttctttttataac--tataacattcagtttcatggatata--acattttgtttatccagtaatatttttat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52370568 201 + 185818997 tctctatagattttcctattctgaatattttcatgtaaatagaat-catataataggtggccttttgtgccta-ggtggccttccttcagttagcataatgctatcaaggttcatatatgtattggtactttgtttctttttataattgtataacattcaatttcatggataca--acatgttgtttatccaataatatttttat i rheMac8.chr3 I 2 C 0 s macFas5.chr3 125016312 201 - 192294377 tctctatagattttcctattctgaatattttcatgtaaatagaat-catataataggtggccttttgtgccta-ggtggccttccttcagttagcataatgctatcaaggttcatatatgtattggtactttgtttctttttataattgtataacattcaatttcatggataca--acatgttgtttatccaataatatttttat i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 363407 201 - 3123512 tctctatagattttcctattctgaatattttcatgtaaatagaat-catataataggtggccttttgtgccta-ggtggccttccttcagttagcataatgctatcaaggttcatatatgtattggtactttgtttctttttataattgtataacattcaatttcatggataca--acatgttgtttatccaataacatttttat i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 7597084 202 - 10077455 tctctatagattttcctatcctgaatattttcatgtaaatagact-catataataggtggccttttgtgcctagggtggccttccttcagttagcataatgctatcaaggttcatatatgtattggtactttgtttctttttataattgtataacattcaatttcatggatacg--acatgttgtttatccgataatatttttat i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 121534815 201 - 127223203 tctctatagattttcctattctgaatattttcatgtaaatagaat-catataataggtggccttttgtgccta-ggtggccttccttcagttagcataatgttatcaaagttcatatatgtattggtactttgtttctttttataattgtataacattcaatttcatggataca--atatgttgttcatccaataatatttttat i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 666739 202 + 1799296 tctctatagattttcctattctgaatattttcatgtaaatagact-catataataggtggccttttgtgcctagggtggccttccttcagttagcataatgctatcaaggttcatatatgtattggtactttgtttctttttataattgtataacattcaatttcatggataca--acatgttgtttatccaataatatttttat i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 5203006 200 - 6934359 tctctgtagattttcctattctgaatattttcatgtaaatagaat-catataataggtggccttttgtgccta-ggtggccttccttcagttagcataatgctatcaaggttcatatatgtattggcactttatttctttttataattgtataatattcactttcatggataca--acattttgtttatccaataaga-ttttat i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 20077969 192 + 128169293 tctctgtagattttcttattctgaatattttcatgtaaatagaat-catataataggtggccttttgtgcctg-g-----cttctttcaattagcataatattatctaggtttatatatgtattggtac----tttctttttataactatataatattcaatttcatggatata--acattttgtttatccaatcatatttcgat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17659643 196 + 18371965 tctctatagattttcttattctgaatattttcatgtaaatagact-catataataggtggccttctgtgcctg-g-----cttctttcaactagcataatattatcaaggttcatatatgtattggtactttatttctttttataactatataatattcaatttcatggatata--acattttgtttatccaatcacattttgat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2194048 196 - 3566421 tctctatagattttcctattctgaatattttcacgtaaatagaat-catagaataggtggccttttgtgcctg-g-----cttctttcaattagcataatattataaaggttcatatatgtgttggtactttatttctttttataactatataatattcaatttcatggatata--acattttgtttatccaatcatatcttgat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7392624 196 + 9267652 tctctatagattttcctattctgaatattttcatggaaatagaat-catataataggttgccttttgtgcctg-g-----cttctttcaattagaaaaatattatcaaggttcatatatgtattgctactttatttccttttataactatataatattcaatttcatggatata--acattttgtttatccaatcatatttcgat i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1631063 187 - 14340318 tttctatagattttcctgttctgggcatgttcacatgaatggaatgaacacagtgtgtgacctgctgtgcgcg-g-----cttca-------agagtcattctttctgcagcc-----tgtatcagtactttatttctttttatggctgaataatattccatcgtgtgaatatagcacattttatttatccacttatctctctat i otoGar3.GL873564 C 0 I 6173 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=14310194.000000 s hg38.chr14_KI270725v1_random 119579 1593 + 172810 tgacatttgagttgtgttcagcctttggctattttaaatactgctgctaaaaatacttgtgtacaatttgtgtttgaacacctctttccaataatctgggtgtatacctaggaataaatttctgggtcatatgacaattcaatgtttaatat-atttagaagccatcaaattattttacaaagtggccagttctagccatagagtatctaactgtggttttgatttgtagttgcctgatgagtgatgctattgagta-tctttttatgggattattggccgttcgtgtatcttcttgggaaacacatctattcctatcatttatcagttttgagttggga-----tatttgttactgagttaaaacaatttttctatattcaagatac------atatatatacagacatatagatacgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgacttgcttggt-tgtcctttgaaacaccaatgtctttaatttttaacaaattttaaatatctaatttttattttgttgctcatgtttttgatgttacagctatttctttgctagatccaaaatcgtgaagattttcccatatgttttattctagctcttgcatgtgtgtctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagggttccaatttattattttgcaagtggtgatccacgtgtaagttgttgaacc-----agtttgttcaaagactgtctcttcctcattgaattgcacatggcaccactgtaagaatccattgaccatagacacatagttttatatatggactctcaattctcttccatcaatctatatatttttccttcatcagtattttgttgtcttgattactgatactt-tgcagtaaggtttggagcatgggggtgtgaattatcctaatatgttttcttttttcaagattattttggctattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagcttgtcagtttctagacagaagtctgttggaatacttgcagggatttcatcaaatcagtagttcaaattgtaaagtaatacagtatta--------aatcttccaattcatggctgtaagatgtttgctaattact----tattctttaaacaataatttttaattttcagagt-aaaatcctgtatcacat-tttccaaattaatt----at----ta-----tttctttttatgatgctattttaaattgaagtgttttcttaatttcattttggggttttcattgtagatgtgtgcaattgat-ttttgtacatttatcttgtatgctgtaatattgctgaaataatttactagttctatc----gttcagtggattccttaacattttctatatacaagaat--gttattttcaaataaagttttatttcttcctgttcaatatgggtgattcttatttttttagttgccgatttgccctgcataaaatctttagtacagtattgactagaagagttcaaat--tatatatcctattcttatctctgaccatagcgggaaagcatccttt-----accattaagttgcatgcttgctgttggcttttcacaggtgcca-tgtatctggtgtagaaagttc---tct s panTro5.chr1 126700062 1595 + 228573443 tgacatttgagttgtgttcagcctttggctattttaaatactgctgtt-aaaatacttgtgcacaatctgcgtttgaacacctctttccaatactctgggggtatacctaggaatatatttctgggtcatatgactatactatgtttaatat-atttagaagccatcaacctattttccaaagtggccagttctagccatagagtatctaactatggatttgatttgtagttgcctgatgagtgatgctgttgagta-tctttttatgggattattgaccgttcgtgtaccttcttgggatatacatctattcctatcatttatcagttttgagttggga-----tttttgttactgagttaaaacaatttttctatattcaagatac------atatatatgcagacatatagatatgtg-cttctcaaata-ttttctcacaatttttgagctgccttttgacttgcttggt-tgtcctttgaaacaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttacagctatttctttgctagatccaaaatcctgaagattttcgcatatgctttattctagctcttgcatgtatgtctttaattcatttgagttaata-tttttgtatgctttgggggtaaggcttccaatttactattttgcaagtggcgttccacgtgtacgttgttgaccc-----agtttgttcaaagactgtctcttcctcattgaattgcacatggcaccactttaagaatccattgactgtagatacatagttttatatatggactctcaattcactt-catcaatctatgtatttttccttcatcactattgtgttgtcttgattactgatgctt-tgccgtaaggtttggagcacgggggtgtgaattatcctaacatgttttcttttatcaagactattttggctattttgagt-ccctt--------------------------------------acaatcccatgtgtattttagaat-------------------------cagcttgtcagtttctagacagaagtctgttgggatacttgcagggattacgtgaaatctgtagttcaacttgtaaagtactacaatatta--------aatcttccaattaatgggtggaagatgtttgctaattatttagatattcttcaaacaataa-ttttaattttcagagt-aaaatcttgtatcacat-tttccaaattaatt----at----ta-----tttctttttttgatgctattttaaattgaagtgttttcttaacttcattttggggttttcattgtagatgtgtgcaattgat-ttttgtacatttatcttgtatgctgtaatattgctgaaataatttactagttctatc----gttcaatggattccttaaaattttctatatacaagaat--gttattttcaaataaagttttatttcttcccgttcaatatgggtgactcttttttttttagttgccaatttgccctgcataaaatctttagtacagtgttgactagaagaggtcaaag--tatatatcctattcttatctctgaccatagcgggaaagcatccttt-----accattaagttgcgtgcttgctgttggctttttgcaggtgcca-tgtatctggtgtagaaagttc---tct i panTro5.chr1 C 0 C 0 s panPan2.chr7 74680293 1592 + 162613886 tgacatttgagttgtgttcagcctttggctattttaaatactgctgtt-aaaatacttgtgtacaatttgtgtttgaacacctctttccaatactctgggggtatacctgggaataaacttctgggtcatatggcaattctatgtttaatat-atttagaagccatcaacctattttccaaagtggccagttctagccatagagtatctaacagtggttttgatttgtagttgcctgatgagtgatgctgttgtgta-tctttttatgggattattgaccattcgtgtatcttcttgggatacacaactattcctattatttatcagttttgagttggga-----tttttgttactgagttaaaacaatttttctatattcaagatac------atatataagcagacatatagatatgtg-tttctcaaata-ttttctcacaatttttgagctgccttttgacttgcttggt-tgtcctttgaaacaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcgtgtttttggtgttacagctatttctttgctagatccaaaatcctgaagattttcccatatgctttattctagctcttgcatgtgtgtctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagggtttgaatttattattttgcaagtggtgatccacgtgtacgttgttgaccc-----agtttgttcaaagactgtctcttcctcattgaattgcacatggcaccactgtaagaatccattgactgaagatacatacttttatatatggactctcaattctcttccatcaatctatataagtttccttcatcagtattgtgttttcttgattactgatgctt-tgccgt-aggtttggagcacgtgggtgtgaattttcctaatatgttttcttttatcaagactatttgggctattttgagt-ccctt--------------------------------------acaatcccatgtgtattttagaat-------------------------cagcttgtcagtttctagacagaagtctgttgggatacttgtagggatttcatcaaatcggtagttcaccttgtaaagtactacaatatta--------aatcttccaattcatgggtgtaagatgtttgctaattatttagatattctttaaacaataatttttaattttcagagt-aaaatcttgtatcacat-tttccaaattaatt----at----ta-----tt--attttttgatgctgttttaaattgaagtgttttcttaatttcattttggggttttcattgtagatgtgtgcaattgat-ttttgtacatttatcttgtatgctgtaatattgctgaaataatttactagttctatc----gttcaatggattccttaaaattttctatatacaagaat--gttattttcaaataaagttttatttcttcctgttcaatatgggtgactctt-tttttttagttgccgatttgccctgcacaaaatctttagtacagtgttgactggaagaggtcaaag--tatatatcctattcttatctctgaccatagcgggaaagcaaccttt-----accattaagttgcatgcttgctgtgggcttttcacaggtgcca-tgtatctggtgtagaaagttc---tct i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 99742 1598 + 126596 tgacatttgagttgtgttcagcctttggctattgtaaagactgctgctaaaaatacttgtgtacaatttgtgtttgaacacctctttccaataatctgggtgtatacctgggaataaatttctgggtcatatgacaattctatgtttcatat-atttagaagccatcaaattattttccaaagtggccagttctagccatagagtatctaactgtggttttgatttgtagttgcctgatgagtgatgctactgagta-tctttttatgggattctggaccgttcgtgcatcttcttgggaaacacatctattcctatcatttatcagttttgagttggga-----tatttgttacagagttaaaacaatttttctatattcaagatac------atatatatacagagatatagatacgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgactttctttgt-tgtcctttgaaacaccaatgtctttaagtattaagaaattttaaatatctaatttttattttgttgctcatgtttttggggttacagctatttcttagctagatccaaaatcctgaatattttcccatatgctttattctagctcttgcatgtgtgtctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagtgttccaatttactattttgcaagtggcaatccacgtgtacgttgttgaccc-----agtttgttcaaagactgtctcttcctcattgaattgcacatggcaccactgtatgaatccattgactagagacacatagttttatatatggactctcaattctcttccatcaatctatatattcttccttcatcagtattttgttgtcttgattactgatactt-tgcagtaaggtttggagcatgggggtgtgaattatcctaacatgttttcttttttcaagattattttggctattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagcttgtcattttctagacagaagtctgttgggatacttgcagggatttcatcaaatctgtagttcaaattgcaaagaattacaacatta--------aatcttccaattcatgggtggaagatatttgctaattatttagatattctttaaacaataatttttaattttcagagt-aaaatcttgtatcacat-tttccaaattaagt----at----ta-----tttctttttttgatgctattttaaattgaagtgtttccttaatttcattttggggttttcattgcagatgtgtgcaaatgatattttgtacatttatcttgtatgctgtaatattgctgaaataatttacgagttctatc----attcagtggattccttaaaattttctatagaaaataat--gttattttcaaataaagttttacttcttcctgttcaatatcggtgactcttatttttttagttgccggtttgccctgcataaaatctttagtacagtgttgactagaagaggtcaaag--tatgtatcctattcttatctctgagcatagcgggaaagcatccttt-----accattaagttgcatgcttgttgttggcttttctcaggtgcca-ggtatctggtgtagaaagttc---tct i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44140612 1611 - 99891981 tgacgtttgagttgtgttcagcctttggctattttaaatactgctgctaaaaatacttgtgtacaatttgtgtttgaacacctctttccaataatctgggtgtatgcctaggaataaatttctaggtcatacgacaattctatgtttaatat-atttagaagccatcaaactatttgccaaagtggccagttctagccattgagtatctaactgtggttttgatttgtaattgcctgatgagtgatgctactgagta-tctttttatgggattattgaccgttcgtgtatcttcttgggaaacatatctattcctatcctttatcagttttaagttggga-----tatttgttactgagttaaaacaatttttctatgttcaagatac------atatatatacagacatatagatatgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgacttgcttggt-tgtcctttgacacaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttatagctatttccttgctagatccaaaatcctgaagattttcctatatgctttattctagctcttgcatgtatgtctttaattcatttgagttaata-tttttgcatgcttt-ggagtaagcgtttgaatttattattttgcaagtggtgattcacatgtacattgtggaccc---aaagtttgttcaaagactgtctcttcctcatttaattgcacatggcaccactgtaagaatccattgactatagatacatagttttatatatggactctcaattctcttccatcaatctatatatttttccttcatcagtatcatgttgtcttgattattgatgctt-tgcagtaaggtttggaggacgcgggtgtgaattatcctaatatattttcttttttcaagattattctggctattttgagt-ccctt--------------------------------------acaataccatgtgtatttcagtaa-------------------------cagcttgtcagtttctagacagaagtctgttgggatacttgcagggatttcatcaaatctgtagttcaaattgtaaatta-tacaatatta--------aatcttccaattaatggctgtaagatgtttgctaattatttagatcttctttaaacaataatttttaattttcagagt-aaaatattgtattacat-tttccagattaattattaat----ta-----tttcattttttgatgctattgtaaattgaagtgttttcttaatttcattttggggttttcattgtagatgtgtgcaactgat-ttttgtatatttatcttgtatgctgtaatattgctgaaataatttactagttctatc----attcggtggattccttaaaattttctatatacaagaatacgttatttgcaaataaagttttatttcttcctgttcaataagggcaactcttatttctttacttgctgatttgtcctgcataaaatatttggtacaatgttgactagaagaggtaaaat--tatataccctattcttacctctgaccataacaggaaagtatcctttctttcaccattaagttgaatgttt-ctgttggcttttcacaggtgcca-tgaatctggtgtagaaagttctcttct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52370769 1614 + 185818997 tgacatttgagttgtgttcagtctttggctattttaaatactgctgctaaaaatacttgtgtgcaatttgtgtttgaacacctgtttctgataatctgggtatataccgaggaatacatttctaggtcatatgacaattctatgtttaatat-atttagaagctatcaaactattttccaaagtggccagttctaaccattgagtatctaattgtggtattgatttgtagttgcttgatgagtaatgctattgagca-tttttttatgggattattgactgttcgtgtatcttcttgggaaatatatctattcatatcgtttatcagttttaagttggga-----tatttgttactaagttaaaacaatttttctatattcaagatac----atatatatatgtagacatatagatatgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgacttctttggt-tgtcctttgaagcaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttatagctatttctttgctagatccaaaatcatgaagattttcccacatgctttcttctagctcttgcatgtatgcctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagggttcaaatttattattttgcgagtggtgatccacatgtaggttgttgaccc---aaagtttgttcaaagactatctcttcctcattgaattgcacatggcaccactgtaagaatccattgactatagatacgtagttttatatatggactctcaattctcttccatcaatccatatatttttccttcatcaatatcgtgttgtcttgattattgatgctt-tgcagtaaggtttggagtatgggggtgtgaattattctaatatgttttcttttttcaagattattttggctattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagtttgttagtttctagacagaagtctgataggatacttgcagggatttcatcaaatctgtagttcaaattgtcaagtactacaatatta--------aatcttccaattaatggctgtaagatgtttgctaattatttagatcttctttaaacaattctttttaattttcagagt-aaaatattgtattacatgtttccaaattaatt----at-----------ttcatttttttgatgctattgtaaattgaagtgttttcttaatttcattttgacgttttcattgtagatgcgtgcaattgat-ttttgtatatttattttgtatgctgtaatattgctgaaataatttactagttctatcacttattcaggggattccttaacattttctataaacaagaatatgctatttgcaaacaaagttttatttctttctgttcaatatggacaactcttatttctttacttgccgatttgtcctgcataaaacctttagtacaatattgattagaagaggtaaaat--tgtatattctattcttgtgtctgaccacagcgggaaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtgcca-tgtatctggcataggaagtactcttct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125016513 1618 - 192294377 taacatttgagttgtgttcagtctttggctattttaaatactgctgctaaaaatacttgtgtgcaatttgtgtttgaacacctgtttccgataatctgggtatataccgaggaatacatttctaggtcatatgacaattctatgtttaatat-atttagaagctatcaaactattttccaaagtggccagttctaaccattgagtatctaattgtggtactgatttgtagttgcttgatgagtaatgctactgagca-tttttttatgggattattgactgttcgtgtatcttcttgggaaacatatctattcatatcgtttatcagttttaagttggga-----tatttgttactaagttaaaacaatttttctatattcaagatacatatatatatatatgtcgacatatagatatgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgacttctttggt-tgtcctttgaagcaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttatagctatttctttgctagatccaaaatcatgaagattttcccacatgctttcttctagctcttgcatgtatgcctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagggttcaaatttattattttgcgagtggtgatccacatgtaggttgttgaccc---aaagtttgttcaaagactatctcttcctcattgaattgcacatggcaccactgtaagaatccattgactatagatacgtagttttatatatgaactctcaattctcttccatcaatccatatatttttccttcatcaatatcgtgttgtcttgattattgatgctt-tgcagtaaggtttggagtatgggggtgtgaattattctaatatgttttcttttttcaagattattttggctattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagtttgttagtttctagacagaagtctgataggatacttgcagggatttcatcaaatctgtagttcaaattgtcaagtactacaatatta--------aatcttccaattaatggctgtaagatgtttgctaattatttagatcttctttaaacaattctttttaattttcagagt-aaaatattgtattacatttttccaaattaatt----at-----------ttcattttattgatgctattgtaaattgaagtgttttcttaatttcattttgacgttttccttgtagatgcgtgcaattgat-ttttgtatatttattttgtatgctgtaatattgctgaaataatttactagttctatcacttattcaggggattccttaacattttctataaacaagaatatgctatttgcaaacaaagttttatttctttctgttcaatatggacaactcttatttctttacttgccgatttgtcctgcataaaacctttagtagaatattgattagaagaggtaaaat--tgtatattctattcttgtgtctgaccacagcgggaaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtgcca-tgtatctggcgtaggaagtactcttct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 363608 1614 - 3123512 tgacatttgagttgtgttcagtctttggctattttaaatactgctgctaaaaatacttgtgtgcaatttgtgtttgaacacctgtttccgataatctgggtacataccgaggaatacatttctaggtcatatgacaattctatgtttaatat-acttagaagctatcaaactattttccaaagtggccagttctaaccattgagtatctaattgtggtattgatttgtagttgcttgatgagtaat-ctattgagca--ttttttatgggattattgactgttcgtgtatcttcttgggaaacatatctattcatatcgtttatcagttttaagttggga-----tatttgttactaagttaaaacaatttttctatattcaagatac--atatatatatatgtagacatatagatatgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgacttctttggt-tgtcctttgaagcaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttatagctatttctttgctagatccaaaatcatgaagattttcccacatgctttcttctagctcttgcatgtatgcctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagggttcaaatttattattttgcgagtggtgatccacatgtaggttgttgaccc---aaagtttgttcaaagactatctcttcctcattgaattgcacatggcaccactgtaagaatccattgactatagatacgtagttttatatatggactctcaattctcttccatcaatccatatatttttccttcatcaatatcgtgttgtcttgattattgatgctt-tgcagtaaggtttggagtatgggggtgtgaattattctaatatgttttcttttttcaagattattttggctattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagtttgttagtttctagacagaagtctgataggatacttgcagggatttcatcaaatctgtagttcaaattgtcaagtactacaatatta--------aatcttccaattaatggctgtaagatgtttgctaattatttagatcttctttaaacaattctttttaattttcagagt-aaaatattgtattacatttttccaaattaatt----at-----------ttcatttttttgatgctattgtaaattgaagtgttttcttaatttcattttgacgttttcattgtagatgcgtgcaattgat-ttttgtatatttattttgtatgctgtaatactgctgaaataatttactagttctatcacttattcaggggattccttcacattttctataaacaagaatatgctatttgcaaacaaagttttatttctttctgttcaatatggacaactcttatttctttacttgccgatttgtcctgcataaaacctttagtacaatattgattagaagaggtaaaat--tgtatattctattcttgtgtctgaccacagcgggaaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtgcca-tgtatctggcgtaggaagtactcttct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7597286 1614 - 10077455 tgagatttgagttgtgttcagtctttggctattttaaatactgctgctaaaaatacttgtgtacaatttgtgtttgaacacctctttccgataatctgggtatatactgaggaatacatttctagttcatatgacaattctatgtttaatat-atttagaagctatcaaactattttccaaagtggcCAGTTCTAGCCATTGAgtatctaactgtggttttgatttgtagttgcctgatgagtaatgctattgagca-tttttttatggtattattgactgtttgtgtatcttcttgggaaacatatctgttcctattgtttatcagttttaagttggga-----tatttgttactaagttaaaacaatttttctatattcaagatac----atatatatatgtagacatatagatatgtg-tttttcaaatc-tcttctcacaatttttgagctgccttttgacttgtttggt-tgtcctttgaagcaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttatagctatttctttgctagatccaaaatcatgaagattttcccacatgctttcttcaagctcttgcatgtatgcctttaattcatttgagttaata-tttttgtatgcttt-ggggcaagggttcaaatttattattttgcaagtggtgatccacatgtaggttgttgaccc---aaagtttgttcaaagactatctcttcctcattgaattgcacatggcaccactgtgagaatccattgactatagatacatagttttatatatggaatctcaattctcttccatcaatccatatatctttccttcatcaatatcgtgttgtcttgattattgatgctt-tgcagtaaggtttggagtatgggggtgtgaattatcctaatatgttttcttttttcaagattattttggctattttgagt-ccctt--------------------------------------acaattccttgtgtattttagcat-------------------------cagtttgttagtttctagacagaagtctgataggatacttgcagggatttcatcaaatctgtagttcaaattgtcaagtactgctatatta--------aatcttccaattaatggctgtaagatgtttgctaattatttagatcttctttaaacaattctttttaattttcagagt-aaaatattgtattacatttttccaaattaatt----at-----------ttcatttttttgatgctattgtaaattgaagtgttttcttaatttcattttgacgttttcattgtagatgtgtgcaattgat-ttttgtatatttattttgcatgctgtaatattgctgaaataatttactagttctatcacttattcaggggagttcttaacattttctataaacaagaatatgctatttgcaaacaaagttttatttctttctgttcaatatggacaactcttatttctttacttgccaatttttcctgcataaaacctttagtacaatattgactagaagaggtaaaat--tgtatattctatttttgtctctgaccacagtgggaaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtgcca-tgtatctggcgtaggaagtactcttct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121535016 1615 - 127223203 tgacatttgagttgtgttcagtctttggctattttaaatactgctgctaaaaatacttgtgtacaatttgtgtttgaacacctgtttccgataatctgggtatataccgaggaatacatttctagatcatatgacaattccatgtttaatat-atttagaagctatcaaactattttccaaagtggcCAGTTCTAGCCATTGAgtatctaattgtggttttgatttgtagttgcctgatgagtaatgctattgagcattttttttatgggattattgactgttcgtgtatcttcttgggaaacatatctattcctatcgtttatcagttttaagttggga-----tatttgttactaagttaaaacaacttttctatattcaagatac----atatatatatgtagacatatagatatgtg-tttttcaaata-tcttctcacaatttttgagctgccttttgacttgtttggt-tgtcctttgaagcaccaatgtctttaatttttaagaaattttaaatatctaatttttattttgttgctcatgtttttggtgttatagctatttctttgctagatccaaaatcatgaagattttcccacatgctttcttctagctcttgcatgtatgcctttaattcatttgagttaata-tttttgtatgcttt-ggggtaagggttcaaatttattattttgcgagtggtgatccacatgtaggttgttgaccc---aaagtttgttaaaagactatctcttcctcattgaattgcacatggcaccactgtaagaatccattgactatagatacatagttttatatatggactctcaattctcttcaatcaatccatatatttttccttcatcaatatcgtgttatcttgattaatgacgctt-tgcagtaaggtttggagtatgggggtgtgaattatcctaatatgttttcttttttcaagattattttggatattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagtttgttagtttctagacagaagtctgataggatacttgcagggatttcatcaaatctgtagttcaaattgtcaagtattacaatatta--------aatcttccaattaatggctataagatgtttgctaattatttagatcttctttaaacaattctttttaattttcagagt-aaaatattgtattacatttttccaaattaatt----at-----------ttcatttttttgatgctattgtaaattgaagtgttttcttaatttcattttgatgttttcattgtagatgtgtgcaattgat-ttttgtatatttattttgtatgctgtaatattgctgaaataatttcctagttctgtcacttattcaggagattccttaacattttctataaacaagaatatgctatttgcaaacaaagttttatttctttctgttcaatatggacaactcttatttctttacttgccgatttgtcctgcataaaacctttagtacaatattgactagaagaggtaaaat--tgtatattctatccttgtctctgaccacagcggggaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtacca-tgtatctggcgtaggaagtactcttct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 666941 1614 + 1799296 tgacatttgagttgtgttcagtctttggctattttaaatactgctgctaaaaatacttgtgtacagtttgtgtttgaacacctgtttccgataatctgggtatataccgaggaatacatttctagttcatatgacaattctatgtttaatat-atttagaagctatcaaactattttccaaagtggcCAGTTCTAGCCATTGAgtatctaactgtggttttgatttgtggttgcctgatgagtaatgctattgagca-tttttttatggtattattgactgtttgtgtatcttcttgggaaacatatctattcctatcgtttatcagttttaagttggga-----tatttgttactaagttaaaacaatttttctatattcaagatac----atatatatatgtagacatatagatatgtg-tttttcaaatc-tcttctcacaatttttgagctgccttttgacttgtttggt-tgtcctttgaagcaccaatgtctttaatttttaagaaattttaaatatctaatttttattttattgctcatgtttttggtgttatagctatttctttgctagatccaaaatcatgaagattttcccacatgctttcttcaagctcttgcatgtatgcctttaattcatttgagttaata-tttttgtatgcttt-ggggcaagggttcaaatttattattttgcgagtggtgatccacatgtaggttgttgaccc---aaagtttgttcaaagactatctcttcctcattgaattgcacatggcaccactgtgagaatccattgactatagatacgtagttttatacatggaatctcaattctcttccatcaatccatatatctttccttcatcaatatcgtgttgtcttgattactcatgctt-tgcagtaaggtttggagtatgggggtgtgaattatcctaatatgttttcttttttccagattattttggctattttgagt-ccctt--------------------------------------acaattccttgtgtattttagaat-------------------------cagtttgttagtttctagacagaagtctgataggatacttgcagggatttcatcaaatctgtagttcaaattgtcaagtactacaatatta--------agtcttccaattaatggctgtaagatgtttgctaattatttagatcttccttaaacaattctttttaattttcagagt-aaaatattgtattacatttttccaaattaatt----at-----------ttcatttttttgatgctattgtaaattgaagtgttttcttaatttcattttgacgttttcattgtagatgtgtgcaattgat-ttttgtatatttattttgtatgctgtaatattgctgaaataatttactagttctatcacttattcaggggatttcttaacattttctataaacaagaatatgctatttgcaaacaaagttttatttctttctgttcaatatggacaactcttatttctttacttgccaatttgtcctgcataaaacctttagtacaatattgactagaagaggtaaaat--tgtatattctatttttgtctctgaccacagcgggaaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtgcca-tgtatctggcgtaggaagtactcttct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5203206 1682 - 6934359 tgacattggagttctgttcagcctttggctattttaaatactgctgctaaaaatacttgtgtacagtttgtgttggaacacctgtttccgataatctgggtatatactgaggaatacatttctaggtcatatgacaattctatgtttaatat-atttagaagccatcaaactatttaccaaagtggcCAGTTCTAGCCATTGATtatctaattgtggttttgatttgtagttgcctgatgagtaatgctattgagca-tttttttatgggattattgactgttcatgtatcttcttgggaaacatatctattcctatcgtttatcagttttaagttgaga-----tatttgttactgagttaaaacaatttttctatattcaagatcc----atatatatatgcagacattgagatatgtg-tttttcaaata-tcttctcacaatttttgagctgcc-tttgacttgtttggt-tgtcctttgaagcaccaacgtctttaattgttaagaaattttaaatatctaatttttattttgttgctcttgtttttggtgttagagttatttctttgccagatccaaaatcatgatgattttcccacatgctttcttctagctcttgcatgtatgcctttaattcatttgagttcata-tttttgtatgcttt-ggggtaagggttcgaatttattattttgcgagtggtgatccacatgtaggttgttgaccc---aaagtttgttcaaagactatctcttcctcattgaattgcacatggcaccactgtaagaatccattgactatagatacatagttttatatatggaatctcaattctcttccatcaatctatatatttttccttcatcaatatcgtgttgtcttgattattgatgctt-tgcagtaatgtttggagtgtgggggtgtgaattaccctaatatgttttcttttttcaagattaatttggctattttgaat-cccttgactattttgagttccttgagttcatgtgtattttagaatcagtccatgtgtattttagaatcagcttgtcagtttctagacagaaccagcttgtcagtttctagacagaagtctgttaggatacttgcagggatttcatcgaatctgtagttcaaactgtcaagtactacaatatta--------aatcttccaattaatggctgtaagatgtttgctaattatttagatcttctttaaacaattctttttaattttcagagt-aaaatattgtattacatttttccaaattaatt----attaatta-----tttctttttttgatgctattgtaaattgaagtgttttcttaatttcagtttgacattttcattgtagatgtctgcaattgat-ttttgtatatttattttgtatgctgtaatattgctgaaataatttactagctctaccacttattcaggggattccttaacattttctataaacaagaatatgctatttgcaaataaagttttatttctttctgttcaatatggacaactcttatttctttacttgccgatttgccctgcataaaatctttagtacaatgttgactagaagtggtaaaat--tgtatattctattcatgtctctgaccacagcgggaaagtatcctttatttcaccattaagctgaatgtttgctcttggcttttcacaagtgcca-tgtatctggcgtaggaagttctcttct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20078161 1595 + 128169293 tgacatttgagttgtgttcaccctttggctattttcagtactgctgctaaaattacttgtgtacaatttgtgtttgaacatgtgtttccaataatctgggtatatacctaggaataaatttctagatcatatgacaattctatgtttaatataaggtagaatccatcaaactattttccaaagtggACAATTATAGCCATTGAATATACAACtgtggatttgatttgtagttgcatgatgagtaatgctattgagca-tcttttcatggggttactgaccatttgtgtatcttcttgggaaacgtatttatttatatcctttttcagttttaagttaggatgac-tttttgttactgtgttaaaacaatttttttatattcaagatac------atacagatatag--atatgagtatgtg-tttttcaaata-ttttttcacaatttttgagttgccttttgacttgcttgatgtgtcctt----------atgtctttaattattaagaaaatttaaatatctgatttttattttgttgctcatgtctttggggctatagctgtatctttgctagatccaaagtcatgaaaattttcccacatgctttcttctagctcgtgcatgtgcatctttaattcatttgagtcaatattttttgtatgcatt-ggggtaagagttcaaatttattattttgcaggtggtgatccacatgtacgttgttgacccaaca---tttattcagagactatcttttcctcattgaattgcacatggcatcactgtaagaatctattgcctatagacacatagttttatatatgggctctaaattctcttccatcaatgtatatatatttccttcatcagtatcatgttgtcttgattactgataatgatgcagtaaggtttgaagtacagaggtatgatttatcctactaagtttttctttttcaagactatgttgttgattttgagt-ccctg--------------------------------------agaagtccatgtgtactttagaat-------------------------cagcttgtcagttttcagatagaagt------ggattcttgcagggatttcataaaatctgtagttcaaattgtaaagtactgccatcttaacaatatcaat------gttcttggctgtaagatttttgctgtttatttagatcttctctaaacaat---ttttaattttcagagtaaaaatattgtattatat-attccaaattgatt----at----taatcattttatttttttgatgctattataaattgaagtgttttcttaatttcattttggggtgttcattgtagatgtgtataattgag-ttttatatatttatcttgtatgctgtaatattactgaaataatttactagtta-------tattcagtgaactccttaaacttttctacatacaagaatatgttatttacaaataaagttttatttcttcctgttcaatacgggcaactcttattccctta----cccatttgcccagcataaaatctttagtacagtgttgactagacgaggtaaaagtatatatatcctattcttgtctctgagcatat-gggaaagtatcctttctttcattattaagttgaatgtttgctgttggcttttcacaggtgcca-tgtacctggtgtacgaagttcctt--- i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 17659839 1612 + 18371965 tgacatatgagttgtgttcaccctttgactattttgagtactgttgctaaaattacttgtgtacaatttgtgtttgaacacctgtttccattaatctgggtatatacctaggaataaatttctaggtcatatgacaattctatgtttaatataagatagaatccatcaaactattttccaaagtggacagttttagccattgagtatctaactgtggatttgatttgtagttgcatgatgagtaatgctattgagca-tcttttcatgggattattgaccattcatgtgtcttcctgggaaacatatttagttatatcctttatcagttttaagttaggatgtcatttttgttactgtgtt-aaacaatttttctatattcaagatac------atacagatatag--gtataggtatgtg-tttttcaaat--ttttttcacaatttttgagttaccttttgactcgcttgatgtgtcctttgaagcacaaatgtcttcaattattaagaaatttaaagtatctaatttttattttgttgctcatgtctttggtgctatagctatatctttgctggatccaaagtcatgaaaattttcccatatgctttcttctagctcatgcatgtacatctttaattcatttgagttaata-tttttgtatgcatt-ggggtaagagttcaaatttattattttgcaggtgctgatccacatgtacgttgttgacccgacaatgtttattcaaagat--tcttttcctcattgaattgcacatggcatcactgtaagaatctattgactatggacacatagatttatatatgggctctcaatcctcttccatcaatctatgtatttttccttaatcagtatcatgttgtcatgattcctgatactt-tgcagtaaggtatgaagtacagaggtgtgaattatcctactatgtttttctttttcaagg------tggtgattttgagtcccctt--------------------------------------acaattccatgtgtactttagaat-------------------------cagcttgtaaattgtcagatagaagtctattgggattcttgcagagatttcataaaatctgtagttcaaattgtaaagtactgccatcttaacagtataaatcttccaattcttggctgtaagatttttgttgtttatttagttcttctttaaacaat---ttttaattttcagagtaaaaatattgtattatat-tttccaaattgatt----a-----caatcatt---tatttttgatgccattataaat-----tgttttcttaatttcattttggtgtgttcattatagacgtgtataattgag-ttttgtatatttatcttgtatgctgtaatattactgaaataatttactagttctatcagttattcagtgaactccttaaacttttctatacacgagagtatgttatttacaaagaaagttttatttctttctgttcaatatgggcaactcttattcctttactttcccattggccctgaaaaaaatctttagaaccatgttgactagaagaggtaaaag--tatatatcctattcttatctctgaccatatggggaaagtatcctttctttcattattaagttgaatgtttgttgttggcttttcacaggtgccagtgtatctggtgtacgaagttccct--- i saiBol1.JH378145 C 0 I 304 s cebCap1.NW_016107540v1 2194244 1559 - 3566421 tgatatttgagttgtgttcaccctttggctattttgagtactgctgctaaaattacttgtgtacaatttgtgtttgaacacctgtttccaataatctgggtatacacctaggaataaatttctaggtcatatgacaatactatgtttaatataaggtagaatccatcaaactattttccaaagtggACAATTCTAGCCATTGAgcatctaactgtggatttgatttgtagttgcatgatgagtaatgctattgagca-tcttttcatgggattattgatcattcgtgtatcttcttggaaaacgtatttatttatatcctttatcagttttagg-----------------------------------------------------------------------------taggtatgtgttttttcaaatgcttttttcacaatttttgagttgccttttgacttgtttgatgtgtcctttgaaacacaaatgtctttaattattaagaaattttaaatatctaatttttatttcattgcttatgtctttggtgctgtagctatatctttgctagatccaaagtcatgacaattttcccatatgcttttttctagttcttgcatgtgcatctttaattcatttgagttaata-tttttgtatgcatt-ggggtaagagttcaaatttattattttgcaggtggcgatccacatgtacgttgttgacccaacaatgtttattcaaagac--tcttttcctcattgaattgtgcatggcatcactgtaagaatctactgactatagacacatagttttatatgtgggctctcaattgtctttcatcaatctatatatttttccttcatcggtatcatgttgtcttgattactgatactt-tgcagtaaggtttgaagtacaaaggtgtgaattatcctactaggtttttctttttcaagattattttgttgattttgagt-ccctt--------------------------------------acaattccatgtgtactttagaat-------------------------cagcttgtcagttttcagatagaagtctgttgggattcttgcagggatttcataaagtctgtagttcaaattgtaaagtactgccatcttaacaatataaatcttccaattcttggctgtaagatttttgctgtttgtttagatcttctttaagcaat---ttttaattttcagagtaaaaatattgtattatat-tttccaaattgatt----ac----taatcattttatttttttgatgatattataaattgaagtgttttcttaatttcattgtaggatgttcattgtagatgtgtataattgag-ttttgtatatttatcttgcatgctgtaatattactgaaataatttactagttctatcagttattcagtgaactccttaaacttttctatatacaagaacatgttatttacaaataaagttttatttcttcctgttcaatatgggcaactcttattcctttacttgcccatttgccctgaataaaatctttagtacaaagttgactagaagaggtaaaa---tatatatcctattcttgtctctgatcatatggggaaagtactgtttctttcattattaagttgaatgtttgctgttggcttttcacaggtgcca-tgtatctggtgtatgaagttcctt--- i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 7392820 1618 + 9267652 tgacatttgagttgtgttcaccctttggctattttgagttctgctgctaaaattac--gtgtacaatttgtgtttgaacacccgtttccaaaaatctgggtatacacctaggaataaatttctaggtcatatgacaattctatggttaatataaggtagaatccatcaaactattttccaaagtggACAACTCTAGCCATTGAgtatctaactgtggatttgatttgtagttgcatgatgagtaatgctattgagca-tcttttcatgggattattgaccattcgtgtatcttcttgggaaacgtatttatttatatcctttatcagttttaagttaggatgac-tttttgttactgtcttaaaacaatttttctatattcaagatac------atacagatatag--atataggtatgtg-tttttcaaatatttttttcacaatttttgagttgccttttgactcgcttgatgtgtcctttgaagcaca-atgtctttaattattaagaaattttaaatatctaatttttatttcattgctcatgtctttggtgctatagctatatctttgctagatccaaagtcatgaaaatttttccatatgcttccttccagctcgtgcatgtgcatcttta----atttgagttaata-tttttgcatgcatt-gcggtaagagttcaaatttattattttgcaggtggtgatccatgtatacattgttgactcagcaatgtttgttcaaagactatcttttcctcattgaattgcacatggcatcactgtaagaatctattgactatagacacatagttttagatatgggctctcaatcctcttccatcaatctatgtatttttccttcatcaatatcatgttgccttgattcctgatactt-tgcagtaaggtttgaagtacagaggtgtgaattatcctactatgtttttctttgtcaaga------tggtgattttgagt-ccctt--------------------------------------acaattccatgtgtattttagaat-------------------------cagcttgtcggttttcagatagaagtctgttgggattcttgcagggatttcataaaatctgtagttcaaattgtaaactactgccatcttaacaatataaatcttccaattcttggctgtaagatttttgctgtttatttagatattctttaaacaat---ttttaattttcagagtaaaaatattgtattatgt-tttccaaattgatt----ac----taatcattttatttttttgatgctattataaattgaagtgttttcttaatttcatttaggggtgttcattgtagatgtgtataattgag-atttgtatatttaccttgcatgctgtaatattactgaaataatttactagttctatcagttattcagtgacctccttaaacttttctatatacaagaatatgttatttacaaataaagttttatttcttcctgttcaatatgggcaactcttattcctttacttgcccacttgcccagcataaaatctttagtacaatgttgactagacaaggtaaaagtatatatatcctattcttatctctgaccatatggggaaaatattctttctttcattattaagttgaatgtttgctgttggcttttcacaggtgcca-tgtatctggtgtatgaagttccct--- i aotNan1.NW_018514471v1 C 0 I 3 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1631250 6173 - 14340318 I a score=26957.000000 s hg38.chr14_KI270725v1_random 121172 3 + 172810 att s panTro5.chr1 126701657 3 + 228573443 att i panTro5.chr1 C 0 C 0 s panPan2.chr7 74681885 3 + 162613886 att i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 101340 3 + 126596 att i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44142223 3 - 99891981 att i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52372383 3 + 185818997 att i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125018131 3 - 192294377 att i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 365222 3 - 3123512 att i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7598900 3 - 10077455 att i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121536631 3 - 127223203 att i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 668555 3 + 1799296 att i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5204888 3 - 6934359 atc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20079759 3 + 128169293 att i calJac3.chr8 I 3 C 0 s cebCap1.NW_016107540v1 2195805 3 - 3566421 att i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 7394441 3 + 9267652 att i aotNan1.NW_018514471v1 I 3 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e saiBol1.JH378145 17661451 304 + 18371965 I e otoGar3.GL873564 1631250 6173 - 14340318 I a score=4551460.000000 s hg38.chr14_KI270725v1_random 121175 559 + 172810 cctggttcattgag------tttttattttt----atttttaatcattaaagcatttggattttgttaaatgtgttttccgaatctatcgagatgatcatgcaattctcgtttcttattctatggataagatgtattaccttaatggattttgggctgttaaaccaacctgggaatacttgtataaatttcactttgtcatagtgtataattcttttatatgttgctagttctgatttgttagtattttttaaggaattttgcgtttatact------------tatagtag-ttttatttttctatgatatttggactaatttttgtatcaaggtaacactggccccaaagagtaaattgggaagtgaatatttc---ttttt-aaaaaagctagtcaagaattaatatcaattattcAACACTAACAAATA---T------TATTATAAAttattaatttctctaatttttattttcttccttctgcttgctttaggtttagttttttattctttccagcgccttaatgtggaaggtcatcttatCCCATCCTTTCATTTGTCTTTTCATTCTCTAAATAGTGTCTTTTTAGC s panTro5.chr1 126701660 568 + 228573443 cctggtttattgag------tttttattttt----atttttaatcgttaaagcatttggattttgttaaatgtcttttccgaatctatcgacatgatcatgcaattctcgtttcttattctatggataagatgtattaccttaatggattttgggctgttaaaccaacctgagattactagtctaaatttcactttgtcatagtgtataattcttttatatgttgctagatctgatttgttagtattttttaaggaattttgcatttatact------------tatagtgg-ttttatttttctatgctatttggactaatttttgtatcaaggtaacactggcctcacagaataaattgggaagtgaatatttctctttttt-aaaaaagccagtcaagaattaatatcaattAGTCAATACTAACAAATA---TGATTAACATTATAAATTCTTAATTTctctaattttaattttcttccttctgcttgctttaggtttagtttgctattctttccagtgccttaaagtggaaggtcatcttatCTCCTCCTTTCCTTTGTCTTTTCATTTTCTAAATAGTGTCTTTTTAGC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74681888 568 + 162613886 cctggttcattgag------tttttattttt----atttttaatcattaaagcatttagattttgttaaatgtcttttctgactctatcgacatgatcatgcaattctcgtttcttattctatggataagatgtattaccttaatggattttgggctgttaaaccaacctgagattactagtataaatttcactttgtcatagtgtataattcttttatatgttgctagatctgatttgttagtattttttaaggaattttgcatttatact------------tatagtag-ttttattcttctttgctatttggactaatttttgtatcaaggtaacactggccccacagaataaattgggaaatgaatatttctcttttta-gaaaaagtcagtcaagaattaatatcaaCTAGTCAACCCTAACAAATA---TGAttactattataaattattaatttctctaatttttattttcttccttctgcttgctttaggtttagtttgctattctttccagtgccttaatgtggaaggtcatcttatCTCCTCCTTTCCTTTGTCTTTTCATTTTTGAAATAGTGTCTTTTTAGC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 101343 552 + 126596 cctggttcattgag------tttttattttt----atttgtaatcattaaagcatttggattttgttaaatgtcttttccgaatctatcgagatgatcatgcaattctcgtttcttattctatggataagatgtattaccttaatggattttgggctgttaaaccaacctgggattacttgtataaatttcactttgtcatagtttataattcttttatatgtt-ctagatctgatttgttagtattttttaaagaattttgcatttatact------------tatagtag-ttttatttttctatgctatttggactaatttttgtatcaaggtaacactggccccacagaatagatcgagaagc------------ttttt-aaaaaagcctgtcaagaattaatatcaattattcAGCACTAACAAATA---T---TATTATTATAAATTATTAATtactctattttttattttcttccttctgcttgctttaggtttagtttgctattctttccagagccttaatgtggaaggtcatcttatCTCATCCTTTCATTTGTCTTTTCATTTTCGAAATAGTGTCTTTTTAGC i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44142226 569 - 99891981 cctggttcattgagtttttatttttattttt----atttttaatcattaaagcatttggattttgttaaatgccttttctgaatctattgagatgatcatgcaattcttgtttcttattctatggataagatgtattaccgtaatggattttgggctgttaaaccaccctgggattactagtataaatctcactttgtcatagtgtataattcttttatatattgctagatttgatttgttagcattttttaaggaattttgcatttatact------------tacagtagtttttatttttctatgatatttggactaatttttgtatcaaggtaacactggctctacagaataaattgggaaatgaatatttc---tcttt-aaaaaa---tgtcaagaattaatatcaattattcAATACTAACAAATA---TTATTAATATTATAAAttattaatttctctaatttttattttcttccttctgcttgctttaggtttagtttgctattttttccagtgccttaatgtggaaggtcatcttatctcatcctttcatttttcttttcattttctaaATAGTGTCTTCATAGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52372386 557 + 185818997 cttggttcattgag------------ttttt----atttttaattatt-aagcatttggattttgttaaatgctttttctgaatcttttgtgatgatcatgcaattcttgtttcttattctatggataagatatgttacatttatggattttgggttgttcaaccaacctgggatgactagtataaatctcactttgtcatagtgtataattcttttatatgttgctagatttgatttgctagcatttttaaagaacatttgcatttatacttacg-----agatatagtag-ttttatttttctatgatatttggactaatttttgtatcaaggtaatgctgaccccacagaacaaagtaggaagtgaatatttctctttttt-aaaaaaattagtcaataattagtatcaattattcAATATTAACAAATA---T---TATTATTATAAAttattaatttctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagtaccttaatgtggaaggtcatattatctcagcctttcATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125018134 556 - 192294377 cttggttcattgag------------ttttt----atttttaattatt-aagcatttggattttgttaaatgctttttctgaatcttttgtgatgatcatgcaattcttgtttcttattctatggataagatatgttacatttatggattttgggttgttcaaccaacctgggatgactagtataaatctcactttgtcatagtgtataattcttttatatgttgctagatttgatttgctagcatttttaaagaacatttgcatttatacttacg-----agatat-gtag-ttttatttttctatgatatttggactaatttttgtatcaaggtaatgctgaccccacagaacaaagtaggaagtgaatatttctctttttt-aaaaaaattagtcaataattagtatcaattattcAATATTAACAAATA---T---TATTATTATAAAttattaatttctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagtaccttaatgtggaaggtcatattatctcagcctttcATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 365225 557 - 3123512 cttggttcattgag------------ttttt----atttttaattatt-aagcatttggattttgttaaatgctttttctgaatcttttgtgatgatcatgcaattcttgtttcttattctatggataagatatgttacatttatggattttgggttgttcaaccaacctgggatgactagtataaatctcactttgtcatagtgtataattcttttatatgttgctagatttgatttgctagcatttttaaagaacatttgcatttatacttacg-----agatatagtag-ttttatttttctatgatatttggactaatttttgtatcaaggtaatgctgaccccacggaacaaagtaggaagtgaatatttctctttttt-aaaaaaattagtcaataattagtatcaattattcAATATTAACAAATA---T---TATTATTATAAAttattaatttctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagtaccttaatgtggaaggtcatattatctcagcctttcATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7598903 557 - 10077455 cttggttcattgag------------ttttt----atttttaattatt-aagcatttggattttgttaaatgcttttcctgaatcttttgtgatgatcatgcaactcttgtttcttattctatggataagatatgttacatttatggattttgggttgttcaaccaacctgggatgactagtataaatctcactttgtcatagtgtataattcttttatatgttgctagatttgatttgctagcatttttaaagaacatttgcatttatacttatg-----agatatagtag-ttttatttttctatgatatttggactaatttttgtatcaagataatgctgaccccacagaacaaagtaggaagtgaatatttctctttttt-aaaaaaattagtcaataattagtatcaattattcAATATTAACAAATA---T---TATTATTATAAAttattaatttctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagcaccttaatgtggaaggtcatcttatctcagcctttcATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121536634 549 - 127223203 cttggttcattgag----------------------tttttaattatt-aagcatttggattttgttaaatgctttttctgaatcttttgtgatgatcatgcaattcttgtttcttattctatggataagatatgttacatttatggattttgggttgttcaaccaacctgggatgactagtataaatctcactttgtcatagtgtataattcttttatatgttgctagatttgatttgctagcatttttaaagaacatttgcatttatacttatg-----agatatagtag-ttttatttttctatgatatttggacgaatttttgtatcaaggtaatgctgaccccacagaacaaagtaggaagtgaatatttctctttttttaaaaaaattagtcaataattagtatcaattattcAATATTAACAAA---------TATTATTATAAATTATTAATGTctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagtaccttaatgtggaaggtcatcttatCTCAGCCTTTCATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 668558 558 + 1799296 cttggttcattgag------------ttttt----atttttaattatt-aagcatttggattttgttaaatgctttttctgaatcttttgtgatgatcatgcaactcttgtttcttattctatggataagatatgttacatttatagattttgggttgttcaaccaacctgggatgactagtataaatctcactttgtcatagtgtataattcttttatatgttgctagatttgatttgctagcatttttaaagaacatttgcatttatacttacg-----agatatagtag-ttttatttttctatgatatttggactaatttttgtatcaagataatgctgaccccacagaacaaagtaggaagtgaatatttctcttttttaaaaaaaattagtcaataattagtatcaattattcAATATTAACAAATA---T---TATTATTATAAAttattaatttctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagtaccttaatgtggaaggtcatcttatCTCAGTCTTTCATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5204891 554 - 6934359 cttggttcattgag------------ttttt----gtttataatcatt-aagcatttggatattgttaaatgctttttctgactcttttgcaatgatcatgcaattcttgtttcttattctatggataagatatgttacatttatggattttgggttgttcaaccaacctgggatgactggtataaatctcactttgtcatagtgtataattcttttatatgttgctagattcgatttgctagcatttttaaagaaaatttccatttatacttacg-----agatatagtag-ttttgtttttctatgatatttggactaatttttgtatcaaggtaatgctgaccccacagaataaagtaggaagtgaatatttctctttttt-taaaaagttagtcaataattaataacaattattcAATATTAACAAA---------TATTATTATAAAttattaatttctctaattttcattgtcttccttctgcttgctttaggtt---tttgctagtttttccagtaccttaatgtggaaagtcaccttattTCAGTCTTTCATTTGTCTTTTCATTTTCTAAATAGTGTCTT-----C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20079762 540 + 128169293 cccggtttattgag------------ttttaaaaaatttttaattattaaagcatttggattttgttaaataccttttctgcatctattgtgatgatcat---------------------------------tattacatttatgaatttggggctgttaaaccaacctgggattactggtataaatctcactttgtcatagtgtgcaattcttttacatgttgctagatttgatttgctaaga-ttttaaaggaattttgcatttatactcatgacatgagacataatag-ttat-tttttttatgatatttggactaatttttgtatcaacgcaatactggccccacagaataaattggtaagtgactatgtctctctttt-tttaaagttagtcaggaattaatattaatAATTCAATGTTAACAACTTATAT---TATTATTATAAAttattaatttctctaa-ttttattttcttccttctccttgctttaggtttagtttgctattttttccaatgtcttaatgcagaagTTCATCTTATCTCAGTGTTTCGTTT-CATTTTCATTTTCTTAATA-TGTCTTAATAGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17661755 537 + 18371965 ccCGGTTTATTGag------------tttttaaaaatttttaatttttaaagcatttggattttgttaaataccttttctgcatctattgagatgatcat---------------------------------tattacatttatggatttggggctgttaaaccaacctgggattactggtatacatctcactttgtcatactgtataattcttttatatgttactagatttgatttcctaagt-ttttaaaggaattttgcatttatactcatgacataagatatagtag-ttatatttttctatgatatttggactaatttttgtatcaaggtaatactggccccacagaataaattgataagtgaatatttctct-tttt-aaaaaatttagtcaggaattaacattaattattcaatgttAACAAC-----T---TATTATTATAAAttattaatttctctaatttttattttcttccttctgattgctttaggtttattttgctattttttccagtgtcttaatgcagaaggtcatcttatCTCAGTGTTTCATTCGTATTTTCATTTTCTTAATA-TGTCTTCATAGT i saiBol1.JH378145 I 304 C 0 s cebCap1.NW_016107540v1 2195808 534 - 3566421 cctggtttatttag------------ctttttaaaatttttaattattaaagcatttggattttgttaaataccttttctgcatctattgagatgatcat---------------------------------tattacatttatggatttggggctgttaaaccaacctgggattattggtataaatctcactttgtcatagtgtataattcttttatatgttgctagattttatttgctgaga-ttttaaaggaattttgcatttatactcatgacgtaagatatagctg-ttatatttttctatgatatttggattaatttttgtatcaaggtaatact------acagaacaaactagtaagtgaatatttctctttttt-aaaaaatttagtcaggaattaatattaattattcAATGTTAACGACTT---A---TATTATTATAAAttattaatttctctaatttttattttcttccttctgcttgctttaggtttactttgctattttttccagtgtcttaatgcagaaggtcatcttatCTCAGTGTTTCGTTTGTATTTTCATTTTCTTAATA-TGTCTTAATAGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7394444 543 + 9267652 cctggtttattgag------------ttataaaaaatttttaattattaaagcatttggattttgttaaataccttttctgcatctattgagatgatcat---------------------------------tattacatttatggatttggggctgttaaaccaacctgggattactggtataaatcttactttgttatagtgtataattcttttatatgttgttagatttgatttgctaaga-ttttaaaggaattttgcatttatgctcatgacataagatatagtag-ttatatttttctatgatatttggactaatttttgtatcaaggtaatactggccccacagaataaattggcaagtgaatatttctctcgttt-tttaaagttagtcaggaattaatattaattattcAATGTTAACAACTTACAT---TGTTATTATAAAttattaatttctctaatttttatttccttccttctgtttgctttaggtttagtttgctattttttccagtgtcttaatgcagaaggtcatcttatctcagtgtttcagttgtattttcattttcttaata-tGTCTTAATAGT i aotNan1.NW_018514471v1 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I e otoGar3.GL873564 1631250 6173 - 14340318 I a score=2463154.000000 s hg38.chr14_KI270725v1_random 121734 253 + 172810 Atcagatgagctccc-------caggtcggtagtactccatgtttattgctgcacaacaatgacagg----tagtatgtcctgaagacaatggaaacttaacattcaaaat-ctcctagattccac--cttatatgatatgtctctcc----aattggtcctaatttctaccctttctctattataaaccgtaagtacaatggcattcaatgagttctgtgagtctttttagtaaattcttgaaactgagggtgttcaggggaaacccctg s panTro5.chr1 126702228 258 + 228573443 Atcaggtgagctccc-------caggttggtagtactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcctagataccac--cttatgtgatatgtctcttcctttgattggtcctaatttctaccctttctctattataaaccatgagtacaatggcattcaatgagttctgtgagtctttttagtaaattcttgaaactgagagtgttctggggaaacccctg i panTro5.chr1 C 0 C 0 s panPan2.chr7 74682456 256 + 162613886 Atcaggtgagctccc-------catgttggtagtactctatgtatattgctgtacaacaatgacagg----taatatgtcctgaaaacaatggaaac--aacattcaaaatcctcctagattccac--cttatgtgatatgtctcttccttggattggtcctaatttctaccctttctctattataaaccatgagtacaatggtattcaatgagttctgtgagtctttttagtaaattcttgaaactgagggtgttctggggaagcccctg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 101895 253 + 126596 Atcaggtgagctccc-------caggttggtagcactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaat-ctcctagattccaa--cttacatgatatgtctcttc----aattggtcctaatttctaccctttctctattataaaccatgagtacaatggcattcaatgagttctgtgagtctttctagtaaattcttgaaactgagggtgttcaggggaaacccctg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44142795 258 - 99891981 Atcaggtgagctccc-------catgttggtagtactccatgtttattgctgtacaacaataacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcctagattccac--tttatatgatatgtctcttcctttgattgatcctaatttctaccctttctctattataaaccatgagtacaatagcattcaatgagtcctgtgagtctttctagtaaattcttgaaactgagggtgttctggggaaacccctg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52372943 256 + 185818997 Atcaggagggctccc-------caggttggtaatactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcttagattccaccacttttatgatatgtctcttcctttgattggtcctaatttctatcctttctctattttaaaccatgaatacaatagcattcaatgagttctgtgagtc----tagtaaattcttgaaactgagggcactctggggaaacccctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125018690 256 - 192294377 Atcaggagggctccc-------caggttggtaatactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcttagattccaccacttttatgatatgtctcttccttcgattggtcctaatttctatcctttctctattttaaaccatgaatacaatagcattcaatgagttctgtgagtc----tagtaaattcttgaaactgagggcactctggggaaacccctg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 365782 256 - 3123512 Atcaggagggttccc-------caggttggtaatactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcttagattccaccacttttatgatatgtctcttccttcgattggtcctaatttctatcctttctctattttaaaccatgaatacaatagcattcaatgagttctgtgagtc----tagtaaattcttgaaactgagggcactctggggaaacccctg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7599460 256 - 10077455 Atcaggtgggctccc-------caggttggtagtactctatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcttagattccaccacttttatgatatgtctcttccttcgattcgtcctaatttctatcctttctctattttaaaccatgaatacaatagcattcaatgagttctgtgagtc----tagtaaattcttgaaactgagggcgctctggggaaacccctg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121537183 263 - 127223203 ATCAGGAGGGCTCCCCAGGTTGCAggttggtagtactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcctagattccaccacttttatgatatgcctcttcctttgattggtcctaatttctatcctttctctattttaaaccatgaatacaatagcattcaatgagttctgtgagtc----tagtaaattcttgaaactgaaggtgctctggggaaacccctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 669116 256 + 1799296 Atcaggagggctccc-------caggttggtagtactccatgtttattgctgtacaacaatgacagg----taatatgtcctgaagacaatggaaacttaacattcaaaatcctcttagattccaccacttttatgatatgtctcttccttcaattggtcctaatttctatcctttctctattttaaaccatgaatacaatagcattcaatgagttctgtgagtc----tagtaaattcttgaaactgagggcgctctggggaaacccctg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5205445 256 - 6934359 ATCAGGAGGGCTCCC-------CAGGTTGATAGTAGTCCATGTTTGTTGCTGTACAACAATGACAGG----TAATATGTCCTGGAgacaatggaaacttaacattcaaaatccttctagattctaccacttttatgatatgtctcttcctttgattggtcctaatttctaccctttctctgttttaaaccatgagtacaatagcattcaatgagttctgtgagtc----tagtaaattcttaaaactgagggtgttctggggaaacccctg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20080302 258 + 128169293 Atcagatgacctcct-------gtggttggtagtactccatggttattgccatacaacaatgacagg----tagtatttcttgaagacaatggaaacttaacattcaaaatcctcctagattccac--cttatatgatatgcctcttcctttgattgctctgaatttctatcctttctctattataaatcataagtacaatagtgttcactgagttctgtaaatctttctagtaaattcttgaaactgagtgtgttctggggaaaccccca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17662292 240 + 18371965 ATCAGATGAC-------------------------CTCCATGGTTATTGCCATACAACAAAGACAGG----TAGTATTTCCTgaagacaatggaaacttaacattcagaatcctcctagattccac--cttatatgatatgtctcttcctttgattgctcctaatttctatcctttctctattataaaccatgagtaccatagtgttcagtgagttctgtaaatctttctagtaaattcttgaaactgagtgtgttgtggggaaacccctg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2196342 258 - 3566421 Atcagatgacctcct-------gcggttgatagcactccatggtgattgccatacaacaaggacagg----tagtatttcctgaaggcagtggaaacttaacattcaaaatcctcctggattccac--cttatatgatatgtctcttcctttgattgctcctaatttctatcctttctctattataaaccatgagtacaatagtgttcagtgagttgtgtaaatctttctagtaaattcttaaaactgagtgtgttctggggaaacccttg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7394987 258 + 9267652 Atcagatgacctcct-------gaggttggtagtactccatggttgctgccatacaacaatgacagg----tagtatgtcctgaagacaatggaaacttaacattcaaaatcctcctagattccac--cttatgtgatatgtttcttactttgattgctcctaatttctatcctttctctattataaaccatgagtacaatagtgttcagtgagttctgtaagtctttctagtaaattcttgaaactgagtctgttctgcagaaacccctg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1637423 224 - 14340318 atcagctgagctccc-------caggttggcagtgcctcacacttattgccacacagcactgacaggaaGTTCATGTGTCCTGAAGACAATGGAACCTCAGCATTTAAAATCCTCTTAGGTCTCAC--CTTCT--------TCTCGTcctgtaataaacagcattt------------------------gtgagaatattagcattcagtgagttctatgcaactttctagtgaatt------attggtggtggtttggagatactgctg i otoGar3.GL873564 I 6173 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e canFam3.chr18 4101139 1236 + 55844845 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=1378581.000000 s hg38.chr14_KI270725v1_random 121987 152 + 172810 aactggcagttggtgtcagaagtgagaatcgtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgcagctggACGCAAACTCTGCACAATTTGGGCCAGAAGTCTCGTGTTGACTT-TGCAGCTTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA s panTro5.chr1 126702486 152 + 228573443 aactggcagttggtgacaaaagtgcgaatcatctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgcagctggACGCAAACTCTGCAGAATTTGGGCCAGAAGTCTCGTGTTGACTT-TGCAGCCTAAAT--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74682712 152 + 162613886 aactggcagttggtgacaaaagtgcgaatcatctt-ac---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgcagctggACCCAAACTCTGCACAATTTGGGCCAGAAGTCTCGTGTTGACTT-TGCAGCATAAAT--------------TATCATGTAGTTTGTCTAACCCTCAATAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 102148 152 + 126596 atctggtagttggtgtcagaagtgagaatcgtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actgtgcagctggACGCAAACTCTGCACAATTTGGGCCAGAAGTCTCGTGTTGACTT-TGCAGCGTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44143053 152 - 99891981 aactggaagttggtgtcagaggtgagaatagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgcagctggACCCAAACTCTGCACAATTTGGGCCAGAATTCTCGTGTTGACTT-TGCAGCCTGAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52373199 152 + 185818997 aattggcagttggtgtcagaagtgagtgcagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggACCCAAAGTCTGAACAATTTGGGCCAGAATTCTCATGCAGACTT-TGCAGCCTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125018946 152 - 192294377 aattggcagttggtgtcagaagtgagtgcagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggACCCAAAGTCTGAACAATTTGGGCCAGAATTCTCATGCAGACTT-TGCAGCCTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 366038 152 - 3123512 aattggcagttggtgtcagaagtgagtgtagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggACCCAAAGTCTGAACAATTTGGGCCAGAATTCTCATGCAGACTT-TGCAGCCTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7599716 152 - 10077455 aactggcagttggtgtcagaagtgagtgtagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggAACCAAAGTCTGAACAATTTGGGCCAGAATTCTCATGCAGACTT-TGCAGCCTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121537446 152 - 127223203 aactggcagtaggtgtcagaagtgagtgtagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggACCCAAAGTCTGAACAATTTGGGCCAGAATTCTCATGCAGACTT-TGCAGCCTAAAG--------------TGTCTTGTAGTTTGTCTAACCCTCAATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 669372 152 + 1799296 aactggcagttggtgtcagaagtgagtgtagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggACCCAAAGTCTGAACAATTTGGGCCAGAATTCTCGTGTAGACTT-TGCAGCCTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5205701 151 - 6934359 aactggcagtt-gtgtcagaagtgactgtagtctt-at---------------------------------------atggcctcttcct------------------ttga--------------------------------actttgctgttggACCCAAAGTCTGAACAATTTGGGCCAGAATTCTTGTGCAGACTT-TGCAGCCTAAAG--------------TATCTTGTAGTTTGTCTAACCCTCAATAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20080560 148 + 128169293 aactggcagttggtgtcagaagtgagaatagtctt-at---------------------------------------acggcct----ct------------------ttga--------------------------------actttgcagctggACCCAAACTCTGTGCAATCTGGGCCAGAAGTGTCATGCAGACTT-TGCAGGCCAAAG--------------CATCTTGCAGTTTGTCTAACCCTCAATAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17662532 141 + 18371965 aatgggcagttggtgtcagaagtgagagtagtcttaat---------------------------------------atggcc-----ct------------------ttga--------------------------------actttgcagctggacccaaactt--cacaATTTGGGCCAGAAGTCTCATGCAGACTT-TGCAGGC-------------------TATCTTGCGGTTTGTCTAATCCTCAGTAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2196600 145 - 3566421 aactggcagttggtgtcagaagtgagagtagtctt-at---------------------------------------atggcc-----ct------------------ttga--------------------------------acttggcagctggACCCAAACTG--CACAGTTTGGGCCAGAAGGCTCATGCAGACTT-TGCAGGCTAAAG--------------CATCTTGCAGTTTGTCTAACCCTCAATAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7395245 146 + 9267652 aactggcagttggtgtcagaagtgagagtagtctt-at---------------------------------------atggcct----ct------------------ttga--------------------------------acttcgcagctggACCCAAACTG--CACAATTTGGGCCAGAAGTCTCATGCAGACTT-TGCAGGCTAAAG--------------CATCTTGCAGTTTGTCTAACCCTCAATAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1637647 239 - 14340318 aacttgaagttggtggcagacttgagAATTATATt-agaacagtagttctcagccttcctaatgccaagaccctttaatgtcaccttcctaatgtcacgacccataggttgagaaccactgTATTAGAAGCACTCTTGTCTCATGCTTTGTACTGGCACTCAAACTCTGCACAGTTTCAATCAGTAGTTTTTAGCAGACTT---CAGTCTGAAT--------------AATTGTGTACTCTGGCTAATGCTAAGTAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4102375 155 + 55844845 AACTGG--GTGGATGT--GAACTGGGATTGGTCTC-AT---------------------------------------GAGGACTCTTGTC------------------TCTC--------------------------------ATTTTGTAGACAGATTCTACTGCCTTGAATTTTGAGTCA-AAGTTTGGGACAGACTTGTCCAGTTTGGAGGTCTGTCTGTACTCAACCTCACAATTTGTTTAACTC------- i canFam3.chr18 I 1236 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 289189 14883 - 1446996 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=5149010.000000 s hg38.chr14_KI270725v1_random 122139 497 + 172810 ATTTGCTTTCATCAAATATTGTATTTGTTACTCCAAAA--TTACCATCACG-------TTTT--TTTT-----CTCCAAATAATTAAAATTGGGAGAAACAGCCAGCTGAGTCTGTAA---C---TCAACA-GAAACAAGTGATCCATATACCATATACCATATAAGTGGCCATTTCATTTTGCCTTCTTCCACCAAATCTTAGCAACC-----------------------TTAACCATTGCCATGAGCCAC-----TGT-------ATGCCTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTAAAAACATTTCATACTCCCATTTGATAAATTTCCCAGCAAAGAGATGCCTACTTTAACTCTATGCAAGTGGCTCATATGCACTAAGTCTGTAGATATTATTCATGTAGTGTGAGA----AAATCATCCCAGCGATGCCAGCACATTCTCCTTCCCAT-GATCTGCTTAGTTTGCAA--ACATATTCAGGCCATGG-----GTGAGA---GATTTGTATTTCA------CAGTACAACAGTTTTATGGAGGACATTGAAACTTACATTGAGCATT s panTro5.chr1 126702638 490 + 228573443 ATTTGCTTTCATCAAATATTGTATTTGTTATCCCAAAA--TTACTATCATG-------TTTC--TTTT-----ATCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATACCATATAAGTGGCCATTTCATTTTGCCTTCTTCCACCAAATCTTAGCAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCCTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTAAAAACACTTCATACTCCCATTTGATAAATTTCCCAGCAAAGAGATGCTTACTTTAACTCTATGCAAGTGGCTCATATTCACAAAGTCTGGAGATATTATTCATGTAGTGTGAGA----AGATCATCCCTGCGATGCCAGCACATTCTCCTTCCCAT-TATCTGCTTAGTTTGCAA--ACATATTCAGGCCGTAG-----GTGAGA---GATTTGTATTTCA------CAGTACAACAATTTTATGGAGGTCATTGAAACTTAGATTTAGCATT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74682864 488 + 162613886 ATTTGCTTTCATCAAATATTGTATTTGTTACCCAAAAA--TTACCATCATG-------TT----TTTT-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATACCATATAAGTGGCCATTTCATTTTGCCTCCTTCCTCCAAATCTTAGCAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCCTACCGTCTACA---------------------------AACAAACAA-GTATCTTTTAAAAACACTTCATACTCCCATTTGGTAAATTTCCCAGCAAAGAGATGATTACTTTAACTCTATGCAAGTGGCTCATATTCGCAAAGTCTGGAGATATTATTCATGTAGTGTGAGA----AAATCATCCCAGCGATGCCAGCACATTCTCCTTCCCAT-GATCTGCTTAGTTTGCAA--ACATGTTCAGGCCGTAG-----GTGAGA---GATTTGTATTTCA------CAGTACAACAATTTTATGGAGGTGATTGAAACTTAGATTTAGCATT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 102300 499 + 126596 ATTTGCTTTCATCAAATATTGTATTTGTTACCCCAAAA--TTACCATCACG-------TTTCTTTTTT-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAGTCAGTAA---C---TCAACA-GAAACAAGTGATCCATGTACCATATACCATATAATTGGCCATTTCATTTTGCCTTCTTCCACCAAATCTTAGCAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCCTAAAAGCTACA---------------------------AACAAACAA-GTATCTTTTAAAAACACTTCATACTCCCATTTGATAAATTTCCCAGCAAAGGGATGCCTACTTTAACTCCATGCAAGTGGCTCATATTCACGAAGTCTGTAGATACTATTCATGTAGTGTGAGA----AAATCATCCCAGCGATGCCAGCACATTCTCCTTCCCAT-GATCTGCTTAGTTTGGAA--ACATATTCAGGCCATGG-----GTGACA---GATTTGTATTTCA------CAGTACAACAATTTTATGGAGGACAATGAAACTTACATTGAGCATT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44143205 489 - 99891981 ATTTGCTTTCATCAAATATTGTATTTGTTACCCCAAAA--CTACCATCAAA-------TTT---TTTT-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATACCATATAAGTGGCCATTTCATTTTGCCTCCTTCCTCCAAATCTTAGCAACT-----------------------TCAACCATTGCCAAGAGCCAC-----TGT-------AGGCCTACCGGCTACA---------------------------AACAAACAT-GTATCTTTTAAAAACACTTCACACTCCCATTTGATAAATTTCCCAGCAAAGAGATGCCTACTTTCACTCTATGCAGGTGGCTCATATTCACGAAGTCTAGAGATATTATTAATGCAGTATGAGA----AAACCATCCCAGTGATGCTAGCACATTCTCCTTCCCAT-GATCTGCTTAGTTTGCAA--ACATATTCAGGCCATGG-----GTGAGA---GATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52373351 492 + 185818997 ATTTGCTTTCATCAAATATTGTATTTATTACCCCAAAA--TTACCATCATGA----TTTTTT--TTTC-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATATCGTTTAAGTGGCCATTTCATTTCACCTCCTTCCACCAAATCTTAACAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCTTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTGAAAACACTTCATACTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTATTTTAACTCTATCCAAGTGGCTCATA-TTGGGAAGTCTGGCGATATTATTAATGCAGTGTGAGA----AAATCATCCCAGTGATACGAGCACATTCTTCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGGCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125019098 491 - 192294377 ATTTGCTTTCATCAAATATTGTATTTATTACCCCAAAA--TTACCATCATGA-----TGTTT--TTTC-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATATCGTTTAAGTGGCCATTTCATTTCACCTCCTTCCACCAAATCTTAACAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCTTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTGAAAACACTTCATACTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTATTTTAACTCTATCCAAGTGGCTCATA-TTGGGAAGTCTGGCGATATTATTAATGCAGTGTGAGA----AAATCATCCCAGTGATACGAGCACATTCTTCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGGCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 366190 491 - 3123512 ATTTGCTTTCATCAAATATTGTATTTATTACCCCAAAA--TTACCATCATGA-----TTTTT--TTTC-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATATCGTTTAAGTGGCCATTTCATTTCACCTCCTTCCACCAAATCTTAACAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCTTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTGAAAACACTTCATACTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTATTTTAACTCTATCCAAGTGGCTCATA-TTGGGAAGTCTGGCGATATTATTAATGCAGTGTGAGA----AAATCATCCCAGTGATACGAGCACATTCTTCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGGCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCATT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7599868 489 - 10077455 ATTTGGTTTCATCAAATATTGTATTTATTACCCCAAAA--TTACCATCATG------TTTTT--TTTT-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATATCGTTTAAGTGGCCATTTCATTTCACCTCCTTCCACCAAATCTTAACAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCTTACCAGCTACA---------------------------AACAAACAA-GTATC--TTAAAAACACTTCATACTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTATTTTAACTCTATCCAAGTGGCTCATATTTGGGAAGTCTGACGATATTATTAATGCAGTGTGAGA----AAATCATCCCGGTGATGTGAGCACGTTCTCCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGGCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121537598 490 - 127223203 ATTTGCTTTCATCAAATATTGTATTTATTACCCCAAAA--TTACCATCATG------ATTTT--TTTT-----CTCCAAATAACTAACATTGGTAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATATTGTTTAAGTGGCCATTTCATTTCACCTCCTTCCACC-AATCTTAACAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCCTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTTAAAACACTTCATATTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTATTTTAACTCTATCCAAGTGGCTCATATTTGGGAAGTCTGGCGATATTATTAATGCAGTGTGAGA----AAATCATCCCGGTGATGCCAGCACATTCTCCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGGCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAATAATTTTATGGAGGGCACTGAAACTTAGATTGAGCATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 669524 490 + 1799296 ATTTGCTTTCATCAAATATTGTATTTATTACCCCAAAA--TTACCATCATT-------TTTT--TTTT-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTAAT-------CCATATATCGTTTAAGTGGCCATTTCATTTCACCTCCTTCCACCAAATCTTAACAACC-----------------------TCAACCATTGCGATGAGCCAC-----TGT-------AGGCTTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTGAAAACACTTCATACTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTATTTTAACTCTATCCAAGTGGCTCATATTTGGGAAGTCTGGCGATATTATTAATGCAATGTGAGA----AAATCATCCCGGTGATGCGAGCACATTCTCCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGGCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5205852 496 - 6934359 ATTTGCTTTCATCAAATATTGTATTTATTACTCCAAAA--TTACCATCATGTTTTTTTTTTT--TTTT-----CTCCAAATAACTAACATTGGGAGAAATAGCCAGCTGAATCTGTAA---C---TCAACA-GAAACAAGTGAT-------CCATATATCGTTTAAGTGGCCATTTCATTTCATCTCCTTCCACC-AGTCTTAACAACC-----------------------TCAAGCATTGCCATGAGTCAC-----TGT-------AGGCCTACCAGCTACA---------------------------AACAAACAA-GTATCTTTTGAAAACACTTTATACTCCCATTTGATAAATTTCTCAGCAAATAGATGCCTGTTTTAACTCTATCCAAGTGGCTCATATTTGGGAAGTCTGGCGATATTATTAACGCAGGGTGAGA----AAATCATCCCCGTGATGCCAGCACATTCTCCTTCCCAT-GATCTACTTAGTTTGCAA--ACATATTCAGTCCATGT-----GTGAGA---AATTTGTATTTCA------CAGTACAACAATTTTATGGAGGGCATTGAAACTTAGATTGAGCACT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20080708 487 + 128169293 ATTTGCTCTCCTCAAATATTGTATTTATTATCCC-AAA--TTACCATCATG-------CTTT--TTTT-----CTCCAAATAACTAACATTGGGAGAAATAGTCAGCTCAATCTGGAA---T---TGAACA-GAAACAAGTGAT-------CCATATACCCTTTCACTGGAAATTTCATTTTGCCTCCTTCCACCAAATCTTAGCAACC-----------------------TCAGCAATTGCCATGAGCCAC-----TGT-------AGGCCTATTGTCTACA---------------------------AGCAAACAA-GTACCTTTTATAAACACTTCATACTCCCAATTGATAAATTCCCCAGCAGACAAATGCCTGTTTTAATTCTATGCAAGTGGCTCATATTTGCGAAGTCTGGAGATATTACTAATGTGGCATCAGA----AAATCATCCCAGTGATGCCAGCACGTTCTCCTTCCCAT-GACCTGCTTAGTTTGCAA--ACATATTCAGGTCATGG-----GTGAGA---GATTAGTATTTCA------CAATACAACAATTTT-TGGAGGGCATTGAAACTTAGATTCAGCA-T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17662673 485 + 18371965 ATTTGCTTTCCTCAAGTATTGAATTTATTAGCCCAAAA--TTACCATCATG-------TTTT--TTTT-----CTTCAAATAACTAACATTGGGAGAAATAGCCTGCTCAGTCTGGAA---T---TGAACA-GAAACAAGTGAT-------CCATGTGCCCTTTCAGTGGCAATTTCATTTTGCCTCCTTCCACCAAATGTTAGCAACC-----------------------CTAACCATTGTCATGAGCCAC-----TG--------AGGCCTGTTGTCTACA---------------------------AACAAAAAA-GTATCTTTTA-AAACACTTCATACTCCCATTTGATACATTCCCTAGCAGACAAATACCTGTTTTAACTCTACGCAAGAGGCTCATATTTGCAGAGCCTGGAGACATTATTAATGCAGTGTGAGA----AGACCATCCCAGTGATGCCAGCAGGTTCTCCTTCCCAT-GACCTGCTTAGTTTGCAA--ACATATTCAGGTTGTGG-----GTGAGA---GATTAGTATTTCA------CAATA-AACAATTTT-TAGAGGACATTGAAACTTAGATTCAGCA-T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2196745 493 - 3566421 ATTTGCTTTCCTCAAATATTGTATTTATTACCCCCAAA--TTACCATCATG-------TTTT--TTTTTTTTCCTCCAAATAACTAACATTGGGAGAAGTAGCCAGCTCAATCTGGAA---T---TGAACA-GAAACAGGTGAT-------CCATATGCCCTCTCAGTGGCTATTTCATTCTGCCTCCTTCCACCAAATCTCAGCAACC-----------------------CCAACTATTGCCATGAGCCAC-----TGT-------AGGCCTATTGTCTGCA---------------------------AACAAACAA-GTATCTTTTAAAAACACTTCATACTCCCATTTGATAAATTCCCCAGCAGACAAATGCCTGTTTTAACTCTATGCAAGTGGCTCATATTTGCGAAGTCTGGATATATTATTAATGCAATGTGAGA----CAATCATCCCAGTGATGCCAGCACATTCTCCTTCCCAT-GACCTGCTTAGTTTGCAA--ACATATTCTGGTCATGG-----GTGAGA---GATTAGTATTTCA------CAATACAACAATTTT-TGGAGGTCATTGAAACTTAGATTCAGCA-T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7395391 487 + 9267652 ATTTGCTTTCCTCAAATATTGTATTTATTACCCCAAAA--TTACCATCATG-------TTTT--TTTT-----CTTCAAATAACTAACATTGGGAGAAATAGCCAGCTCAATCTGGAA---T---TGAACA-GAAACAAGTGTT-------CCATATGCCCTTTCAGTGGCAATTTCATTTTGCCTCCTTCCACCAAATCTTAGCAACC-----------------------TCAACCATTGCCATGAGCCAC-----TGT-------AGGCCTATTGCCTACA---------------------------AATAAAC-----GTCTTTTAAAAACACTTCATACTCCAATTTGATAAATTCCCCAGCAGACAAATGCCTGTTTTAACTCTATGCAAGTGGCTCATATTTGTGAAGTCTGGAGATATTATTAATGCAGTGTGAGA----AAATCATCCCAGTGATGCCAGCACGTTCTCCTTCCCAT-GACTTGCTTAGTTTGCAA--ACATATTCAGGTCATGG-----GTGAGAGATGATTAGTATTTCA------CAATACAACAGTTTT-TGGAGGGCATTGAAACTTAGATTCAGCA-T i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1637886 490 - 14340318 CTGTGGTTTCATCAAGTCT----TTTTTTACTCCAAAAAGTTGTTTTCATG-------TTTT--TCCT-----CT---AGGAACCAA-ATTGGAAGAATTAGCCAACTGAATCCATA---------CAATA-TGAACAGGAGAC--------------------AAGTGGGC----TGTCTTGCCTGTCTCCACCAAATTGGAGAAGCC-----------------------TCAGCCACTGCCATGAGCAGA-----CCT-CTTATCAAGCTTGCAATCCAGATGACCATAAGGCTTCTGAT--------AAAAAATAA-ATGTATTTTAAAAACATTCCATACTTCCATTTGATAAATTTCCCAGCAAGCAGATGCCTATTTTAATTCTGTGTAAGTTACCCATATTTGGGATAATTAGAGGTATTATTAGTGAAGTGTGAGA----AAATCTTCCCGGAGAAGCCCACATATTCTTTGGCCTGTGGATCCACAGGGCTTGCAA--ACATATTCAGGCCAGGG-----GTGAGA---GATTTTTATTTCA------TGACATAGACATTCTATGGAGGGCTGTGATACTTAGATTGAGCATT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4102530 528 + 55844845 ---TGGTTTCAGTAAATCTTTTAAGATTTACTGTCAAA--ATAGCATCATG---------TC--TTTT-----TCCCTGGGAACCAAAGCTGGGAAAATTAGCCAGAAGACTCTGCGA---ACTGTGAATGTAAAACAGGTGGC-------TTGTATACCACCTCAGTGGCCATTTCCCTTATTTTGCCTCTACCAAACCTTAGTAACC-----------------------ACAATTCCTGCCATCAGACAG-----AGCTCTTATCAAACTTGCTATCTGGATGGCCAACTGATTATTGACTAAAAGAAAATAAAGAT-ATATATTTTTGCAACACTTCATGCTTCTGTTTGATACATTCCCCATCAAACAGATCCACATCTTAACTCCAT-CGAATGGCCCATATTTGAGAAACTCACAGGTTTTACTAGTGTGATGTAATA----AAACTATCCTAGAGAAGTCAATATATTCTCCTTCTCAT-GATTATCTAGGTTTGCAA--ACATGTTCAAGCCATAT-----GAGAGG---GATTTTTATTTCATACACCCAAAAAAACAGTTTTATGGCAGGCTTTGGTACTTAGATTGAGTAGT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 304072 512 - 1446996 ACTTGTTTTCGTTATATATTTTAC-AATCTCAGCAAAC--TCTGTGCTATG-TCATTTTATT--TTCT-----ATCCAAAGGAATCGAAATGGGAGAATTAGCCAACTGAATCTGTAAAGCT---TGAACA-GGAAAAAGTGCC-------TTGTTTGAACTCTCAGATACCGTTTCATTT---CTCTCACCACCAAATCTGAGTAACCACGTAGTGTAACATTTCACAACTTCAATCACTGCCACCAGCCTTTCATATGC-------ATCCTTACTGAATAAA---------------------------AATAAACAGCAGACACAACAAAAAC-----ATACTTTTG-TTGATGCATTCCCCAGTAAACAGATCCTCATTTTAATTCCATGGAA-CAGTTCGTATTTGAGAAATTCACAGGTTTTATTCACATAAGGTGAGAAATGAAATCATCCTACAGAAAACAGCGTATTATCCATCCCTT-GGCCCATTATATTTGCAAATATATATTCAGGCTATGTGATTAGAGAGG---GATTTTTATTTCA------TATT----------------GGACTTTCATACCTAGATTTAGTATT i dasNov3.JH578441 I 14883 I 273 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=89638.000000 s hg38.chr14_KI270725v1_random 122636 8 + 172810 TTAGTAca s panTro5.chr1 126703128 8 + 228573443 TTAGCAca i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683352 8 + 162613886 TTAGCAca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 102799 8 + 126596 TTAGTAca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44143694 8 - 99891981 CTAGTAca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52373843 8 + 185818997 TTAGTAca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125019589 8 - 192294377 TTAGTAca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 366681 8 - 3123512 TTAGTAca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600357 8 - 10077455 TTAGTAca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538088 8 - 127223203 TTAGTAca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670014 8 + 1799296 TTAGTAca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206348 8 - 6934359 TTAGTAca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081195 8 + 128169293 TTAGTAca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663158 8 + 18371965 TTAGTACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2197238 8 - 3566421 TTAGTAca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7395878 8 + 9267652 TTAGTAca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1638376 1 - 14340318 -------a i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4103058 8 + 55844845 TTAATATA i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 304584 273 - 1446996 I e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=1948279.000000 s hg38.chr14_KI270725v1_random 122644 206 + 172810 gccacacatcactgaatgatagggatacgttctaacagatgcatccataggcaatttcatcattttgcaaacatcacagggaatattacaaacacctagattgtacagcctaccac--gtctaggttatatggtatagcctctctctcccaggctacaaacctgtgtactacattactgtactgaatactgcaggcaataagaacaca s panTro5.chr1 126703136 205 + 228573443 gtcacgcatcactgaatgacagggatacgttctaacagatgcatccataggcaatttcatcattttgcaaacgtcagagagaatattacaaacacctagtttgtacagcctaccac--gtttaggttatatggtataacctctctatcctaggctacaaacctgtgtactaca-taatatactgaatactgcaggcaataagaacaca i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683360 206 + 162613886 gtcacgcatcactgaatgacagttatacgttctaacagatgcatccataggcaatttcatcattttgcaaacatcacagagaatattacaaacacctagtttgtacagcctaccac--gtttaggttatatggtataacctctctctcctaggctacaaacctgtgtgctactctactatactgaatactgcaggcaataagaacaca i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 102807 206 + 126596 gtcacacatcactgaatgatagggatacgttctaagagatgtatccataggcaatttcatcattttgcaagcatcacagagaatattacaaacacatagattgtacagcctaccac--atctaggttatatggtatagcctctctctcccaggctacaaagctgtgtactacattactgtactgaatactgcaggcaataagaacaca i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44143702 205 - 99891981 atcacacgtcactgaatgataggg-tatgttctacgagatgcatccatagacaatttcatcattttgcaaacatcagagagaatattacaaacacctagattgtacagcctaccac--gtctaggttatatggtatagcctctctctcctaggctacaaacctgcatactacattactgtactgaatactgctggcaattagaacaca i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52373851 208 + 185818997 gtcacacatcgctgaatgatggggatacattctaagagctgcatccataggtaatttcatcattttgcaaacatcagagagaatattacaaacacgtagattgtacagcctaccacatgtctaggtgatatggtatagcctccctctcctaggctacaaacctgtgtactacattactgtactaaatgctgcaggcaattagaataca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125019597 208 - 192294377 gtcacacatcgctgaatgatggggatacattctaagagctgcatccataggtaatttcatcattttgcaaacatcagagagaatattacaaacacgtagattgtacagcctaccacatgtctaggtgatatggtatagcctccctctcctaggctacaaacctgtgtactacattactgtactaaatgctgcaggcaattagaataca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 366689 208 - 3123512 gtcacacatcgctgaatgatggggatacattctaagagctgcatccataggtaatttcatcattttgcaaacatcagagagaatattacaaacacgtagattgtacagcctaccacatgtctaggtgatatggtatagcctccctctcctaggctacaaacctgtgtactacattactgtactaaatgctgcaggcaattagaataca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600365 208 - 10077455 gtcacacatcgctgaatgatggggatacgttctaagagctgcatccataggcaatttcatcattttgcaaacatcagagagaatattacaaacacgtagattgtacagcctaccacatgtctaggtgatatggtatagcctccctctcctaggctacaaacctgtgtactacattactgtactaaatgctgcaggcaattagaataca i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538096 208 - 127223203 gtcacacatcactgaatgatggggatatgttctaagagctgcatccgtaggcaatttcatcatttcgcaaacatcagagagaatattacaaacacctagattgtacagcctaacacatgtctaggtgatgtggtatagcctccctctcctaggctacaaacctgtgtagtacattactgtactaaatgctgcaggcaattagaataca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670022 208 + 1799296 gtcacacatcgctgaatgatggggatatgttctaagagctgcatccataggcaatttcatcattttgcaaacatcagagagaatattacaaacacgtagattgtacagtctaccacatgtctaggtgatatggtatagcctccctctcctaggctacaaacctgtgtactacattactgtactaaatgctgcaggcaattagaataca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206356 208 - 6934359 gccacacatcactgaatgatggggatatgttctaagagcttcatccataggcaatttcatcattttgcaaacatcagagagaatattacaaacacctagattgtacagcctaccacatgtctaggtgatatggtatagtctccctctcctaggctacaaacctgtgtactacattactgtactaaatgctgcaggcaattagaataca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081203 204 + 128169293 ggcacagatcactgaatgatggggatatgttctaagagatgcagccacaggaaatttcagcattttgca---aacagagagaatattacaagcacctagattgtacagcccaccacatgtctaggttatgtggtatgccccatcgctcctaggctacaaacctgt-gactacattactctactgaatactgcaggcaattagaacaca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663166 208 + 18371965 AGcacacatcactgaatgatgggaatatgttctaagagatgcagccacaggaaatttcatcattttgcaaacaacagagagaacattacaagcacctaggttgtagagcccaccacatgtctaggttgtgtggtatgccctatcgctcctaggctacaaacctgtggactacattcctctactgagtactgtaggcagttagaacaca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2197246 208 - 3566421 ggcacacatcactgaatgatggggacatgttctaagagatgcagccacaggaaatttcatcattttgcaaacaacagagagaatattacaagcacgtaggttgtacatcccaccacatgtctaggttatgtggtatgccctatcactcctgggctacaaacctgtgggctacattcctctactgaatactgtaggcaattagaacaca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7395886 208 + 9267652 ggcacgcatcactgaatgatggggatatgttctaagagatgcagccacaggaaatttaatcattttgcaaacaacagagagaatattacaagcacctagattgtacaacccaccacatgtctaggttatgtactatgccctatcactcctaggctacaaacctgtggactacattactctactgaatactgtagggaattagaacata i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1638377 182 - 14340318 gtcacacatcacttaacaatggggacaggttctgagaaatgcatccttagacgatgtcatggccgtgtgaacatcagagagtgaacttcaacaaagca--tggcacagcctgcagcaca-ctgggct---------------------ctgggctaccgacctgtgttgtcgattgctgtcctggagact--cggccactacagcacc i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 304584 273 - 1446996 I e canFam3.chr18 4103066 0 + 55844845 C e tarSyr2.KE946558v1 92334 27522 + 1121937 I a score=25301.000000 s hg38.chr14_KI270725v1_random 122850 3 + 172810 atg s panTro5.chr1 126703341 3 + 228573443 gtg i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683566 3 + 162613886 gtg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103013 3 + 126596 gtg i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44143907 3 - 99891981 gtg i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374059 3 + 185818997 atg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125019805 3 - 192294377 atg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 366897 3 - 3123512 atg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600573 3 - 10077455 atg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538304 3 - 127223203 atg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670230 3 + 1799296 atg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206564 3 - 6934359 atg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081407 3 + 128169293 atg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663374 3 + 18371965 atg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2197454 3 - 3566421 atg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7396094 3 + 9267652 atg i aotNan1.NW_018514471v1 C 0 C 0 s tarSyr2.KE946558v1 119856 1 + 1121937 a-- i tarSyr2.KE946558v1 I 27522 I 2065 s otoGar3.GL873564 1638559 3 - 14340318 atg i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 304584 273 - 1446996 I e canFam3.chr18 4103066 0 + 55844845 C a score=1157406.000000 s hg38.chr14_KI270725v1_random 122853 130 + 172810 gtaagaggttatgtatctaaacatacttaaacatagaaaagtatgtaaaaatatgtattataatctcat-ggaccacttttgtatttgt-aatccatctttgactgaaatgttattatgcatgacAAGACTC---- s panTro5.chr1 126703344 133 + 228573443 gtaagagtttatgtatgtaaacatacttaaacatagaaaagtatgtaaaaatatgtattataatctcatgggaccacttttgtatatgt-aatccatctttgactgaaatattattatacatgacatgactC--TA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683569 133 + 162613886 gtaagagtttatgtatgtaaacatacttaaacatagaaaagtacgtaaaaatatgtattataatctcatgggaccacttttgtatatgt-aatccatctttgactgaaatattattatacatgacatgactC--TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103016 129 + 126596 gtaagaggttatgtacctaaacacacttaatcgtagagaagtatgtaaaaatatgtattataatctcatgggaccacttttgtatatgt-aatccatctt----tgaaatgttattatgcatgacatgactC--AA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44143910 135 - 99891981 gtaagagtttatgtatctgaacatatttaaatgtagaaaagtatgtaaaaatatgtattataatctcatgggaccacttttgtatatgt-aatccatctttgactgaaatgttattatgcatgacatgacCCTGTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374062 128 + 185818997 gtaagagtttatgtatctaaacacatttaa---tagaaaagtatgtaaaactatgtattataatctcatgggatcacttttgtatatgt-attctatctt----tgaaatgttattatgcacgacatgactCTATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125019808 128 - 192294377 gtaagagtttatgtatctaaacacatttaa---tagaaaagtatgtaaaactatgtattataatctcatgggatcacttttgtatatgt-attctatctt----tgaaatgttattatgcacgacatgactCTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 366900 128 - 3123512 gtaagagtttatgtatctaaacacatttaa---tagaaaagtatgtaaaactatgtattataatctcatgggatcacttttgtatatgt-attctatctt----tgaaatgttattatgcacgacatgactCTATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600576 125 - 10077455 gtaagagtttatgtatctaaacacatttaa---tagaaaagtatgtaaaactatgtattataatctcatgggatcacttttgtatatgt-attctatctt----tgaaatg---ttatgcacgacatgactCTATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538307 128 - 127223203 gtaagggtttatgtatctaaacacatttaa---tagaaaagtatgtaaaactatgtattataatctcataggatcacttttgtatatgt-attccatctt----tgaaatgttattatgcacgatatgactCTATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670233 128 + 1799296 gtaagagtttatgtatctaaacacatttaa---tagaaaagtatgtaaaactatgtattataatctcatgggatcacttttgtatatgt-attctatctt----tgaaatgttattatgcacgacatgactCTATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206567 128 - 6934359 gtaagagtttatgtatctaaacacacataa---cagaaaagtatgtaaaactatgtattataatctcatgggactacttttgtatatgt-attccatctt----tgaaatgttattatgcacgacatgactCTATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081410 125 + 128169293 gtaagagtttgtgtatctaagcatatttaaacatggaaaagaatgtaaaaatatctgttataatacc---------tttatatatatgt-agtccatctttgacct-aatgttattatgcacgacatgactCTGTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663377 135 + 18371965 gtaagagtctatgtatctaagaatatttaaacatagaaaagaatgtaaaaatgtgtattataatctcacagaaccacttttgtatatgt-agtccatctttgactgaaatgttattatgcacgacatgactCTGTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2197457 135 - 3566421 gtaagagtttgtgtatttaagcatatttaaacacagaaaagaatgtaaaaatatgtattacaatctcatgggaccacttttgtatatgt-agtccatctttgactgaaatgttattatgcatgacatgactCTGTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7396097 135 + 9267652 gtaagagtttgtgtatctaagcatatttaaacatagaaaagaatgtaaaaatacatattataatctcatgggaccacttttgtatatgt-agtccatctttgactgaaatgttattatgcatgacatgactCTGTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1638562 117 - 14340318 gtgagtactggtgtacttaaatgcattcaaacatagaaaagga-----------gcatcagaatctgacagggtcacttttacacatataaatccaacttcgactgaaatgtcA--------AATATCATTGTATA i otoGar3.GL873564 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 304584 273 - 1446996 I e canFam3.chr18 4103066 0 + 55844845 C e tarSyr2.KE946558v1 119857 2065 + 1121937 I a score=455083.000000 s hg38.chr14_KI270725v1_random 122983 73 + 172810 TGACA-----AAAATAAAATAACACATTGTAAAAAA--TGTACAC--AGATATCAAACATAT--------TAATATTGT--AAAAATAAAAA---- s panTro5.chr1 126703477 65 + 228573443 TGACA----------AAAATTATACATTTTAAAAAA--TGTACAC--ATGTATCAAACATAT-----------TATTAT--AAAAATAAAAA---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683702 65 + 162613886 TGACA----------AAAATAATACATTTTTGAAAA--AGTACAC--ATGTAACAAACATAT-----------TATTAT--AAAAATAAAAA---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103145 73 + 126596 TGACA-----AAAATAAAATAACACATTGTAAAAAA--TATAGGC--AGGTATCAAACATAT--------TAATATTGT--AAAAATAAAAA---- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144045 80 - 99891981 TGACA-----AAAATAAAATAACAAATAGTAAAAAT--TGTACACATATGTATTGAACATATTA---ATTTAATATTAT--AAAAATAAAAA---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374190 71 + 185818997 CGACa-----aaaataaaataat----agtaaaaaa--tgtacacatatgtatcaaacatat--------taatattat--aaaaatataaa---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125019936 71 - 192294377 CGACA-----AAAATAAAATAAT----AGTAAAAAA--TGTACACATATGTATCAAACATAT--------TAATATTAT--AAAAATATAAA---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 367028 71 - 3123512 CGACA-----AAAATAAAGTAAT----AGTAAAAAA--TGTACACATATGTATCAAACATAT--------TAATATTAT--AAAAATATAAA---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600701 69 - 10077455 TGAC------AAAATAAAATAAT----AGTAAAAAA--TGTACACATATGTATCAAAC--AT--------TAATATTAT-AAAAAATATAAA---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538435 76 - 127223203 TGACA-----AAAATAAAATAATAAACAGTAAAAAA--TGTACACATATGTATCAAACATAT--------TAATATTAT-AAAAAATATAAA---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670361 71 + 1799296 TGACA-----AAAATAAAATAAT----AGTAAAAAA--TGTACACATATGTATCAAAC--AT--------TAATATTATAAAAAAATATAAA---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206695 76 - 6934359 TGACA-----AAAATAAAATAATAAATAGTAAAAAA--TGTACACATATGTATCAAACATAT--------TAATATCAT-AAAAAATAAAAA---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081535 87 + 128169293 TGACaaaaataaaataaaataataaataGTGAAAACTGTATACAC--ATGTGTCAAACatatta-tcaattaatatcat--aaaaataaaaa---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663512 78 + 18371965 TGACA-----AAAATAAAATAATAAATAGTAAAAAC--TATACAC--ACGTGTCAAAC--ATTA-TCAATTAATATCGT--AAAAATGAAAA---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2197592 78 - 3566421 Taaca-----aaaataaa--aataaatagtaaaaac--tatacac--acatgtcaaacatatta-tcaataaatatcat--aaaaataaaaa---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7396232 77 + 9267652 TGACA-----AAAATAA---AATAAATAGTAAAAAC--TGTACTC--ATGTGTCAAACATATTA-TCAATTAATATCAT--AAAAATAAAAA---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1638679 82 - 14340318 AAACA-----AAAATACAATAATAAATACTTAAAAA--TGGACACA-ATATACCAAACATATTACTGATTAAATTTAAT--GAAAACAAAAA---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4103066 76 + 55844845 TAACA-----AAGATAAAATAA---ATAGTGAAAGC-------AC--ATGCACCT-ACATATTATGGATTTATTACTAT--ACAAATAAAAATTAA i canFam3.chr18 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e dasNov3.JH578441 304584 273 - 1446996 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I a score=100617.000000 s hg38.chr14_KI270725v1_random 123056 13 + 172810 TATTTATTCAGTG s panTro5.chr1 126703542 13 + 228573443 TATTTATTCAGTG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683767 13 + 162613886 TATTTATTCAGTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103218 13 + 126596 TATTTATTCAGTG i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144125 9 - 99891981 ----TATTCAGCA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374261 13 + 185818997 tatTTATTCAGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125020007 13 - 192294377 TATTTATTCAGTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 367099 9 - 3123512 ----TATTCAGTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600770 9 - 10077455 ----TATTCAGTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538511 9 - 127223203 ----TATTCAGTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670432 13 + 1799296 TATTTATTCAGTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206771 13 - 6934359 TATTTATTCAGTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081622 12 + 128169293 tatttattCAGT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663590 12 + 18371965 TATTTATTCAGT- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2197670 12 - 3566421 taTTTATTCAGT- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7396309 8 + 9267652 ----TATTCAGT- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1638761 13 - 14340318 TTGATATTCACCT i otoGar3.GL873564 C 0 I 4 s canFam3.chr18 4103142 13 + 55844845 TATTTACCCAGTG i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 304857 13 - 1446996 CATCCATCCAATA i dasNov3.JH578441 I 273 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I a score=9090.000000 s hg38.chr14_KI270725v1_random 123069 1 + 172810 T s panTro5.chr1 126703555 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683780 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103231 1 + 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144134 1 - 99891981 T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374274 1 + 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125020020 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 367108 1 - 3123512 T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600779 1 - 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538520 1 - 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670445 1 + 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206784 1 - 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s rhiBie1.NW_016806392v1 3203368 1 - 4622379 T i rhiBie1.NW_016806392v1 N 0 I 164 s otoGar3.GL873564 1638778 1 - 14340318 T i otoGar3.GL873564 I 4 C 0 s canFam3.chr18 4103155 1 + 55844845 C i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 304870 1 - 1446996 T i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I e saiBol1.JH378145 17663602 0 + 18371965 C e aotNan1.NW_018514471v1 7396317 0 + 9267652 C e cebCap1.NW_016107540v1 2197682 0 - 3566421 C e calJac3.chr8 20081634 0 + 128169293 C a score=1416751.000000 s hg38.chr14_KI270725v1_random 123070 138 + 172810 AAGAATTTGT-AATGATCACAAAATGTTCACAGC------TTATATTTTAGTACAGTTTCAAATGCCTGGTGCAATTACTATTTATTTCTGTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT s panTro5.chr1 126703556 127 + 228573443 AAGAATTTGT-AATGA-----------TCACAGC------TTATATTTAAGTACAGTTTCAAATGCCTAGTGCAATTACTATTTATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683781 126 + 162613886 AAGAATTTGT-AATGA-----------TCACAGC------TTATATTTAAGTACAGTTTCAAATGCCTAGTGCAATTACTATTTATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATA--TTTTCAGGTTCAACAATATATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103232 138 + 126596 AAGAATTTGT-AATGATCACAAAATGTTCACAGC------TTATATTTTAGTACAGTTTCAAAAGCCTAGTGCAATTACTATTTATTTCTGTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144135 138 - 99891981 AAGAATTTAT-AATGATCACAAAATGTTCACAGC------TTATATTTTAGTAGAGTTTCATATGCCTAGTTTAATTACTATTTATTCCTTTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTAAACAATATATAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374275 138 + 185818997 AAGAACTTAT-AATGATCACAAAATGTTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTACTATTTATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125020021 138 - 192294377 AAGAACTTAT-AATGATCACAAAATGTTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTACTATTTATTTCTTTGTGTATATTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 367109 138 - 3123512 AAGAACTTAT-AATGATCACAAAATGTTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTACTATTTATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600780 138 - 10077455 AAGAACTTAT-AATGATCACAAAATGTTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTGCTATTTATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538521 137 - 127223203 AAGAACTTAT-AATGATCACAAAATGCTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTACTATTT-TTTTTGTGTGTATTTTAA---------AAATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670446 138 + 1799296 AAGAACTTAT-AATGATCACAAAATGTTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTACTATTTATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATA-TTTTTCAGGTTCAACAATATATAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206785 139 - 6934359 AAGAACTTAT-AATGATCACAAAATGTTCACAAC------TTATATTTTAGTAGGGTTTTAAATGCCTAGTTTAATTACTATTTATTTCTGTGTGTATTTTAA---------ACACGTATATAATAAATATTTTTTCAGGTTCAACAATATATAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081634 133 + 128169293 -AGAATTAAT-AATGATCCTAAAATGTTCACAAC------TTACACTTTAGT--CGTTTTAAATGCTTAGTTTAATTATAAC--ATTTCTTTGTGTATTTTAA---------ACATGCATATAATAAATG-TTTTTCAGGTTCAACAATATGTAT i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 17663602 137 + 18371965 -AGAATTAAT-AATGATCATAAAATGCTCACAAC------TTATATTTTAGTAGAGTTTTAAATGCCTAGTTTAATTATAACTTATTTTTTTGTGTATTTTAA---------ACATGTATATAATAAATG-TTTTACAGGTTCAACAATATATAT i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 2197682 135 - 3566421 -AGAATTAAT-ATTATTCATAAAATGTTTACAAC------TTATATTTTAGTAGATTTTTAAATGCCTAGTTTAATTATAAC--ATTTCTTTGTGTATTTTAA---------ACACGTATATAATAAATG-TTTTTCAGGTTCAACAATATATAT i cebCap1.NW_016107540v1 C 0 I 2507 s aotNan1.NW_018514471v1 7396317 135 + 9267652 -AGAATCAAT-AATGATCATAAGATGTTCACAAC------TTATATTTTAGTAGAGTTTTAAATGCCTAGTTTAATTATAAT--ATTTCTTTGTGTATTTTAA---------ACATGTATATAATAAATG-TTTTTCAGGTTCAACAATATATAT i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 1638779 122 - 14340318 ---AACATTT-AATAGTCACAAA----TTAAAGC--------AAGTTTTAGAAAGGTTTTAAATGA-----TTAATTACAATTAATTTTTTGGTATATTTTGA---------ATATG--TTTAGTAAATA-TTTTACATATTCAATAATACATCT i otoGar3.GL873564 C 0 I 2 s canFam3.chr18 4103156 142 + 55844845 CAGaatttataaacaaaaataaaataatcacaaaa-taaattgtatattattaGGTTATTTAAAGTTCAGCttaattatgatttatttttt--tatatgataa---------atattGACATAACATATA-TTTTACATGTTGAACAACATGTAT i canFam3.chr18 C 0 I 2 s dasNov3.JH578441 304871 150 - 1446996 CAGATTGAGCAAATGACCATAAA-TATTCACAACGttaaattttatattaataaagtttaaaatgtttattttaattatGGT---TTTCTTTGTATATTTTAAAGTATAAATATACATACAGACTATAAA-TTTTACAAGTTCAACAATATATAC i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e rhiBie1.NW_016806392v1 3203369 164 - 4622379 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I a score=189441.000000 s hg38.chr14_KI270725v1_random 123208 20 + 172810 --CAATCCAACTGGCTCTTATA s panTro5.chr1 126703683 20 + 228573443 --CAATCCTACAGGCTCTTATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683907 20 + 162613886 --CAATCCTACAGGCTCTTATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103370 20 + 126596 --CAATCCAACTGGCTCTTATA i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144273 20 - 99891981 --CAAACCTACTGGCTCTTATA i nomLeu3.chr17 C 0 I 5 s rheMac8.chr3 52374413 20 + 185818997 --CAAACCTACTGGCTTTTATA i rheMac8.chr3 C 0 I 5 s macFas5.chr3 125020159 20 - 192294377 --CAAACCTACTGGCTTTTATA i macFas5.chr3 C 0 I 5 s macNem1.NW_012011522v1 367247 20 - 3123512 --CAAACCTACTGGCTTTTATA i macNem1.NW_012011522v1 C 0 I 5 s cerAty1.NW_012000909v1 7600918 20 - 10077455 --CAAACCTACTGGCTTTTATA i cerAty1.NW_012000909v1 C 0 I 5 s chlSab2.chr21 121538658 20 - 127223203 --CAAACCTACTGGCTTTTATA i chlSab2.chr21 C 0 I 5 s manLeu1.NW_012105809v1 670584 20 + 1799296 --CAAACCTACTGGCTTTTATA i manLeu1.NW_012105809v1 C 0 I 5 s colAng1.NW_012115910v1 5206924 20 - 6934359 --CAAACCTACTGGCTTTTATA i colAng1.NW_012115910v1 C 0 I 5 s calJac3.chr8 20081769 20 + 128169293 --TAAACCTACGGGCTCTTATA i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 17663741 20 + 18371965 --TAAACCTACTGGCTCTTATA i saiBol1.JH378145 I 2 C 0 s aotNan1.NW_018514471v1 7396454 20 + 9267652 --TAAACCAACTGGCTCTTATA i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 1638903 20 - 14340318 --TAAATTTTTTCATTCTTATA i otoGar3.GL873564 I 2 C 0 s canFam3.chr18 4103300 19 + 55844845 --TAAACTTTTGGGCTCTTCt- i canFam3.chr18 I 2 C 0 s dasNov3.JH578441 305021 22 - 1446996 CATAAACCTGCTGGCTCTTAGG i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e rhiBie1.NW_016806392v1 3203369 164 - 4622379 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=72769.000000 s hg38.chr14_KI270725v1_random 123228 5 + 172810 -----AATAT s panTro5.chr1 126703703 5 + 228573443 -----AATAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683927 5 + 162613886 -----AATAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103390 5 + 126596 -----AGTAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144298 5 - 99891981 -----AATAT i nomLeu3.chr17 I 5 C 0 s rheMac8.chr3 52374438 5 + 185818997 -----AATAT i rheMac8.chr3 I 5 C 0 s macFas5.chr3 125020184 5 - 192294377 -----AATAT i macFas5.chr3 I 5 C 0 s macNem1.NW_012011522v1 367272 5 - 3123512 -----AATAT i macNem1.NW_012011522v1 I 5 C 0 s cerAty1.NW_012000909v1 7600943 5 - 10077455 -----AATAT i cerAty1.NW_012000909v1 I 5 C 0 s chlSab2.chr21 121538683 5 - 127223203 -----AATAT i chlSab2.chr21 I 5 C 0 s manLeu1.NW_012105809v1 670609 5 + 1799296 -----AATAT i manLeu1.NW_012105809v1 I 5 C 0 s colAng1.NW_012115910v1 5206949 5 - 6934359 -----AACAT i colAng1.NW_012115910v1 I 5 C 0 s rhiRox1.KN300005v1 3640143 5 + 4311341 -----AACAT i rhiRox1.KN300005v1 N 0 N 0 s rhiBie1.NW_016806392v1 3203533 5 - 4622379 -----AACAT i rhiBie1.NW_016806392v1 I 164 N 0 s calJac3.chr8 20081789 5 + 128169293 -----AATAT i calJac3.chr8 C 0 I 5 s saiBol1.JH378145 17663761 5 + 18371965 -----AATAT i saiBol1.JH378145 C 0 I 5 s aotNan1.NW_018514471v1 7396474 5 + 9267652 -----AATAT i aotNan1.NW_018514471v1 C 0 I 5 s otoGar3.GL873564 1638923 5 - 14340318 -----AATGT i otoGar3.GL873564 C 0 I 5 s canFam3.chr18 4103319 5 + 55844845 -----aatat i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 305043 10 - 1446996 AATGTAATAT i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=272698.000000 s hg38.chr14_KI270725v1_random 123233 26 + 172810 TAGTTAAAATCAATTAGTAAATTC----AT s panTro5.chr1 126703708 26 + 228573443 TAGTTAAAATCAATTGGTAAATTC----At i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683932 26 + 162613886 TAGTTAAAATCAATTGGTAAATTC----AT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103395 30 + 126596 TAGTTAAAATCAATTAGTAAATTCatatat i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144303 26 - 99891981 TAGTTAAAATCAATTAGTAAATTC----At i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374443 26 + 185818997 TAGTTGAAATCAATTAGTAAATTC----AT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125020189 26 - 192294377 TAGTTGAAATCAATTAGTAAATTC----AT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 367277 26 - 3123512 AAGTTGAAATCAATTAGTAAATTC----AT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600948 26 - 10077455 TAGTTGAAATTAATTAGTAAATTC----AT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538688 26 - 127223203 TAGTTGAAATCAATTAGTAAATTC----AT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670614 26 + 1799296 TAGTTGAAATCAGTTAGTAAATTC----AT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206954 26 - 6934359 TAGTTGAAATCAAGTAGTAAATTC----AT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081799 26 + 128169293 TAGTTGAAATCAATTAGTAAATTC----at i calJac3.chr8 I 5 I 18 s saiBol1.JH378145 17663771 26 + 18371965 TAGTTGAAATCAATTAGTAAATTC----AT i saiBol1.JH378145 I 5 I 38 s aotNan1.NW_018514471v1 7396484 26 + 9267652 TAGTTGAAATCAATTGGTAAATTC----AT i aotNan1.NW_018514471v1 I 5 I 2467 s otoGar3.GL873564 1638933 26 - 14340318 TAATTGAAATCAACTATTAATTTt----at i otoGar3.GL873564 I 5 C 0 s canFam3.chr18 4103324 22 + 55844845 taattaaatttaaaaattgtat-------- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 305053 26 - 1446996 TGGTTAAAATCAATTAGTAAATTC----AT i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=755313.000000 s hg38.chr14_KI270725v1_random 123259 111 + 172810 ATATAT--ATATACACACGT-GTATCAgt----ctgtatgca----------------------tgtatgtgtgtgtaaatgtaac----tgtgtgtgt-----aaatgtaattgGATGCATCCTAATATTTACCTTTACCTACAAGAT s panTro5.chr1 126703734 119 + 228573443 gcattt--atatgcatacct-gtatcagtgagcgtgtgtgca----------------------tgcatgtttgtgtaaatataattgtatgtgtgtgt-----aaatgtAATTGGATACATCCTTATATTTACCCTTACCTACAAGAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74683958 119 + 162613886 GTATAT--ATATGCATACCT-GTATCAGTGAGCGTGTGTGCA----------------------TGTATGTTTGtgtaaatgtaattgtatgtgtgtgt-----aaatgtaTTTGGATGCATCCTTATATTTACCCTTACCTACAAGAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103425 115 + 126596 atatat--atataCACACGT-GTATCAGT----CTGTATGCA----------------------TGTATGTGTGtgtaaatgtaactgtatgtgcgtgt-----aaatgtaactgGATGCATCCTAATCTTTACCCTTACCTACAAGAT i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144329 119 - 99891981 gtatat--atatacatatgt-gtatcagtgagtgtgtgtgca----------------------tgtatgtgggtgtaaacgtaattgtgtgtgtgtgt-----aaatgtAATTGGATGCATCCTAATATTTACCCTTACCTACAGGAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52374469 143 + 185818997 GTATATAGATACACACACGT-GTATCAgtgagtgtgtgtgcatgtatgtgtgtgtaaatgtaattgtatgtgtgcgtaaatgtaattgtatgtgtgtgt-----aaatgtaattggatgCCTCCTAATATTTACCCTTACCTACAAGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125020215 143 - 192294377 GTATATAGATACACACACgt-gtatcagtgagtgtgtgtgcatgtatgtgtgtgtaaatgtaattgtatgtgtgcgtaaatgtaattgtatgtgtgtgt-----AAATGTAATTGGATGCCTCCTAATATTTACCCTTACCTACAAGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 367303 143 - 3123512 GTATATAGATACACACACAT-GTATCAgtgagtgtgtgtgcatgtatatgtgtgtaaatgtaattgtatgtgtgcgtaaatgtaattgtatgtgtgtgt-----AAATGTAATTGGATGCCTCCTAATATTTACCCTTACCTACAAGAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7600974 141 - 10077455 GTATATAGATACACACACgt-gtatcagtga--gtgtgtgcatgtatgtgtgtgtaaatgtaattgtatgtgtgtgtaaatgtaattgtatgtgtgtgt-----AAATGTAATTGGATGCCTCCTAATATTTACCCTTACCTACGAGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121538714 139 - 127223203 GTATATAGATACACACACgt-gtatcagt----gtgtgtgcatgtatgtgtgtgtaaatgtaattgtatgtgtgtgtaaatgtaattgtatgtgtgtgt-----AAATGTAATTGGATGCCTCCTAATATTTACCCTTACCTACAAGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670640 119 + 1799296 GTATATAGATACACACACGT-GTATCAGTGA--GTGtgtgca----------------------tgtatgtgtgtgtaaatgtaattgtatgtgtgtgt-----aaatgtaattggatgCCTCCTAATATTTACCCTTACCTACAAGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5206980 121 - 6934359 GTATATAGATACAGACACgt-gtatcagtgagtgtgtgtgca----------------------tgtatgcgtgcgtaaatgtaattgtatgtgtgtgt-----AAATGTAATTGGATGCCTCCTAATATTTACCCTTACCTAAAAGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20081843 98 + 128169293 atatatgcacacatacatgt-atatCAGTCAGAGTGTGTGCA--------------------------------------------TGTATGTGTGTGT-----AAATGTAATTGTATGCACTCTAATATTT-CCCTTACCTACAAGAC i calJac3.chr8 I 18 C 0 s saiBol1.JH378145 17663835 98 + 18371965 atatatatacacatacatgt-atatCAGTGAGAGTGTGTGCA--------------------------------------------TGTATGTGTGCGT-----AAATGTAATTGTATGCATTCTAATATTT-CCCTTACCTACAAGAT i saiBol1.JH378145 I 38 C 0 s otoGar3.GL873564 1638959 94 - 14340318 gtatacgtatatgcacacat-atag--------gtatcttta------------------------------------------actgtgtgtgtgtgtatataAAATATAGTTGCAAGCATTCTAATACTCA----TGTTTATAAGAT i otoGar3.GL873564 C 0 I 9 s canFam3.chr18 4103346 109 + 55844845 --atttatatataaaCAAATAGTCTTTATGA--GGATATGCA----------------------TATGTGCATGTG----------TGCGTGTGTATGT----AAAAGGTAAGTGACTATATTCTAACAGTTACCCTTGACTATGAGAT i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 305079 76 - 1446996 ---------------------------------------------------------------------ACCTGGGCATATATATTTGTGAGTGTGTGT----AAAATGTAATTGTATATACCCTAATATTTATCCTTGTTGAGAAGAT i dasNov3.JH578441 C 0 I 2862 e ponAbe2.chrUn 5688366 5371 + 72422247 I e tarSyr2.KE946558v1 119857 2065 + 1121937 I e aotNan1.NW_018514471v1 7396510 2467 + 9267652 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=13923.000000 s hg38.chr14_KI270725v1_random 123370 1 + 172810 T s panTro5.chr1 126703853 1 + 228573443 T i panTro5.chr1 C 0 I 1613 s panPan2.chr7 74684077 1 + 162613886 T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103540 1 + 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44144448 1 - 99891981 T i nomLeu3.chr17 C 0 I 1619 s rheMac8.chr3 52374612 1 + 185818997 T i rheMac8.chr3 C 0 I 1623 s macFas5.chr3 125020358 1 - 192294377 T i macFas5.chr3 C 0 I 1623 s macNem1.NW_012011522v1 367446 1 - 3123512 T i macNem1.NW_012011522v1 C 0 I 1618 s cerAty1.NW_012000909v1 7601115 1 - 10077455 T i cerAty1.NW_012000909v1 C 0 I 1619 s chlSab2.chr21 121538853 1 - 127223203 T i chlSab2.chr21 C 0 I 1623 s manLeu1.NW_012105809v1 670759 1 + 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5207101 1 - 6934359 T i colAng1.NW_012115910v1 C 0 I 1618 s calJac3.chr8 20081941 1 + 128169293 T i calJac3.chr8 C 0 I 2831 s saiBol1.JH378145 17663933 1 + 18371965 T i saiBol1.JH378145 C 0 C 0 s tarSyr2.KE946558v1 121922 1 + 1121937 T i tarSyr2.KE946558v1 I 2065 N 0 s otoGar3.GL873564 1639062 1 - 14340318 T i otoGar3.GL873564 I 9 C 0 s canFam3.chr18 4103455 1 + 55844845 T i canFam3.chr18 C 0 I 2552 s dasNov3.JH578441 308017 1 - 1446996 T i dasNov3.JH578441 I 2862 C 0 e ponAbe2.chrUn 5688366 5371 + 72422247 I e aotNan1.NW_018514471v1 7396510 2467 + 9267652 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=22376.000000 s hg38.chr14_KI270725v1_random 123371 2 + 172810 TC s panTro5.chr1 126705467 2 + 228573443 TC i panTro5.chr1 I 1613 C 0 s panPan2.chr7 74684078 2 + 162613886 TC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 103541 2 + 126596 TC i gorGor5.CYUI01000522v1 C 0 I 3146 s ponAbe2.chrUn 5693737 2 + 72422247 TC i ponAbe2.chrUn I 5371 C 0 s nomLeu3.chr17 44146068 2 - 99891981 TC i nomLeu3.chr17 I 1619 C 0 s rheMac8.chr3 52376236 2 + 185818997 TC i rheMac8.chr3 I 1623 C 0 s macFas5.chr3 125021982 2 - 192294377 TC i macFas5.chr3 I 1623 C 0 s macNem1.NW_012011522v1 369065 2 - 3123512 TC i macNem1.NW_012011522v1 I 1618 C 0 s cerAty1.NW_012000909v1 7602735 2 - 10077455 TC i cerAty1.NW_012000909v1 I 1619 C 0 s chlSab2.chr21 121540477 2 - 127223203 TC i chlSab2.chr21 I 1623 C 0 s manLeu1.NW_012105809v1 670760 2 + 1799296 TC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5208720 2 - 6934359 TC i colAng1.NW_012115910v1 I 1618 C 0 s calJac3.chr8 20084773 2 + 128169293 TC i calJac3.chr8 I 2831 C 0 s saiBol1.JH378145 17663934 2 + 18371965 TC i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 1639063 2 - 14340318 TC i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 308018 2 - 1446996 TG i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4103456 2552 + 55844845 I e aotNan1.NW_018514471v1 7396510 2467 + 9267652 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=11504.000000 s hg38.chr14_KI270725v1_random 123373 1 + 172810 C s panTro5.chr1 126705469 1 + 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr7 74684080 1 + 162613886 C i panPan2.chr7 C 0 I 1610 s gorGor5.CYUI01000522v1 106689 1 + 126596 C i gorGor5.CYUI01000522v1 I 3146 C 0 s ponAbe2.chrUn 5693739 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146070 1 - 99891981 C i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376238 1 + 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125021984 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369067 1 - 3123512 C i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7602737 1 - 10077455 C i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540479 1 - 127223203 C i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 670762 1 + 1799296 C i manLeu1.NW_012105809v1 C 0 I 1611 s colAng1.NW_012115910v1 5208722 1 - 6934359 C i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20084775 1 + 128169293 C i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17663936 1 + 18371965 C i saiBol1.JH378145 C 0 I 2309 s otoGar3.GL873564 1639065 1 - 14340318 T i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 308020 1 - 1446996 C i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4103456 2552 + 55844845 I e aotNan1.NW_018514471v1 7396510 2467 + 9267652 I e cebCap1.NW_016107540v1 2197817 2507 - 3566421 I a score=19197.000000 s hg38.chr14_KI270725v1_random 123374 2 + 172810 TT s panTro5.chr1 126705470 2 + 228573443 TT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74685691 2 + 162613886 TT i panPan2.chr7 I 1610 C 0 s gorGor5.CYUI01000522v1 106690 2 + 126596 TT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5693740 2 + 72422247 TT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146071 2 - 99891981 TT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376239 2 + 185818997 TC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125021985 2 - 192294377 TC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369068 2 - 3123512 TC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7602738 2 - 10077455 TC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540480 2 - 127223203 TC i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 5208723 2 - 6934359 TC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20084776 2 + 128169293 TT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666246 2 + 18371965 TT i saiBol1.JH378145 I 2309 C 0 s cebCap1.NW_016107540v1 2200324 2 - 3566421 TT i cebCap1.NW_016107540v1 I 2507 C 0 s aotNan1.NW_018514471v1 7398977 2 + 9267652 TT i aotNan1.NW_018514471v1 I 2467 C 0 s otoGar3.GL873564 1639066 2 - 14340318 TT i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 308021 2 - 1446996 TT i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4103456 2552 + 55844845 I e manLeu1.NW_012105809v1 670763 1611 + 1799296 I a score=382621.000000 s hg38.chr14_KI270725v1_random 123376 37 + 172810 TGAGACAG--CATTAAAGAAAGAGCACCTTGTATATAAA- s panTro5.chr1 126705472 35 + 228573443 TGAGACAG--CATTAAAGAAAGAGCACCTTGTATA--AA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74685693 35 + 162613886 TGAGACAG--CATTAAAGAAAGAGCACCTTGTATA--AA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 106692 35 + 126596 TGAGACAG--CATTAAAGAAAGAGCACCTTGTATA--AA- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5693742 35 + 72422247 TGAGACAG--CATTAAAGAAAGAGCACCTTGTATA--AA- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146073 35 - 99891981 TGAGACAG--CATTAAAGAAAGAGCATCTTGTATG--AA- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376241 35 + 185818997 TGAAACAG--CGTTAAAGAAAGAGCACCTTGTATG--AA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125021987 35 - 192294377 TGAAACAG--CGTTAAAGAAAGAGCACCTTGTATG--AA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369070 35 - 3123512 TGAAATAG--CGTTAAAGAAAGAGCACCTTGTATG--AA- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7602740 35 - 10077455 TGAAACAG--CGTTAAAGAAAGAGCACCTTGTATG--AA- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540482 35 - 127223203 TGAAACAG--CGTTAAAGAAAGAGCACCTTGTATG--AA- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 672374 35 + 1799296 TGAAACAG--CATTAAAGAAAGAGCACCTTGTATG--AA- i manLeu1.NW_012105809v1 I 1611 C 0 s colAng1.NW_012115910v1 5208725 35 - 6934359 TGAAACAG--CGTTAAAGAAAGAGCACCTTGTATG--AA- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20084778 35 + 128169293 TGAGACGG--CATTGCAGGTAGAGCAGCTTGTATG--AA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666248 35 + 18371965 TGAGACAG--CATTGTAGAAAGAGCACCTTGTATG--AA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2200326 35 - 3566421 TGAGACAG--CATTGCAGAAAGAGCACCTTGTATG--AA- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7398979 35 + 9267652 TGAGACAG--CATTGTAGAAAGAGCACCTTGTATG--AA- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1639068 28 - 14340318 --TAATAT--CTCTAGATGAAGTG-----TATATA--AA- i otoGar3.GL873564 C 0 I 4870 s dasNov3.JH578441 308023 38 - 1446996 TGAGAAAGTCTTTTAAGAAAAGACTTTCAAATATT--AAA i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4103456 2552 + 55844845 I a score=1124983.000000 s hg38.chr14_KI270725v1_random 123413 108 + 172810 TTCAATGCGAAGAGACAAGATATTCTTGATTCTGAAGTCTTGTTCTTTGATACAGCAATGTAATTAATAATAAGAAGAAAAGCAGGACATAGAT-ATGGAGTCTATTTT s panTro5.chr1 126705507 105 + 228573443 TTCAATGCCAACAGACAAGATATTCTTGATTCTGAAGTCTTGTTCTTTTATACAGCAATGTAATTAATAA---GAAGAAAAGCAGGACATAGAT-GTGGAGCCTATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74685728 105 + 162613886 TTCAATGTCAACAGACAAGATATTCTTGATTCTGAAGTCTTGTTCTTTTATACAGCAATGTAATTAATAA---GAAGAAAAGCAGGACATAGAT-GTGGAGTCTATTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 106727 108 + 126596 TTCAATGCAAAGAGACAAGATATTCTTGATTCTGAAGTCTTGTTCTTTTATACAGCAATGTAATTAATAATAAGAAGAAAAGCAGGACATAGAT-ATGGAGTCTATTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5693777 108 + 72422247 TTCAGTGCCAAGAGATAAGATATTCTTGATTCTGAAGTCTTGTTCTTTTATACAGCAATGTAATTAATAATAAGAAGAAAAGCAGGACATAGAT-GTAGAGTCTATTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146108 108 - 99891981 TTCAATGCCAAGAGACAATATATTCTTGATTCTGAAGTCTTGTTCTTTTATACAGCAATGTAATTAATAATAAGAAGAAAAGCAGGACATAGGT-GTGGAGTCTATTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376276 107 + 185818997 TTCAATGCCAAGAGACAAGATATTCTTGATTCTGAAGTTTTGTTATTTCATACAGCAATGTAATTAATAATAAGAAG-AAAGCAGGACATAGGT-GTGGAGTCTATTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125022022 107 - 192294377 TTCAATGCCAAGAGACAAGATATTCTTGATTCTGAAGTTTTGTTATTTCATACAGCAATGTAATTAATAATAAGAAG-AAAGCAGGACATAGGT-GTGGAGTCTTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369105 107 - 3123512 TTCAATGCCAAGAGACAAGATATTCTTGATTCTGAAGTTTTGTTATTTCATACAGCAATGTAATTAATAATAAGAAG-AAAGCAGGGCATAGGT-GTGGAGTCTATTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7602775 107 - 10077455 TTCAATGCCAAGAGACAAGATGTTCTTGATTCTGAAGTTTTGTTATTTCATACAGCAATGTAATTAATAATAAGAAG-AAAGCAGGACATAGGT-GTGGAGTCTATTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540517 104 - 127223203 TTCAATGCCAAGAGACAAGATATTCTTGATTCTGAAGTTTTGTTATTTCATACAGCAATGTAAT---TAATAAGAAG-AAAGCAGGACATAGGT-GTGGAGTCTATTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 672409 107 + 1799296 TTCAATGCCAAGAGACAAGATATTCTTGATTCTGAAGTTTTGTTATTTCATACAGCAATGTAATTAATAATAAGAAG-AAAGCAGGACGTAGGT-GTGGAGTCTATTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5208760 107 - 6934359 TTCAATGCCAAGAGACAAGATGTTCTTGATTCTGAAGTTTTGTTATTTTATACAGCAATGTAATTAATCATAAGAAG-AAAGCAGGACATAGGT-GTGGAGTCTATTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20084813 102 + 128169293 TTCAATACCAAGAGACAAGATCTTCTTGATTCTGAAGTTTTGTAGTTTTATACAGCAAAGTAAT-------AAAAAGAAAAGCAGGACATAGGTAATACAGTCTATTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666283 101 + 18371965 TTGAAAACCAAGAGACAAGCTATTCTTGATTCTGAAGTTTTGTAGTTTTATACAGCAATGCAAT-------AAAAAGAAAAGCAGGACATAGGT-GTGGAGTCTATTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2200361 101 - 3566421 TTCAATGCCAAGAGACAAGACATTCTTGATTCTGAAGTTTTGTAGTTTTATACAGCAATGTAAT-------AAAAAGAAAAGCAGGACATAGGT-GTGGAGTCTATTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7399014 101 + 9267652 TTCAATACCAAGAGACAAGATATTCTTGATTCTGAAGTTTTGTAGTTTTATACAGCAATGTAAT-------AAAAAGAAAAGCAGGACATAGGT-TTGGAGTCTATTTT i aotNan1.NW_018514471v1 C 0 C 0 s dasNov3.JH578441 308061 102 - 1446996 TTAAGTGCCTATAGCCTAGGCATT-TTGATTCTGAAGTTTTATA--TTAATTAAGCAATACAATATATTTTTTAAAG-CTAG--GGATGGAGAT-GTGGCATTTATTTT i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4103456 2552 + 55844845 I e otoGar3.GL873564 1639096 4870 - 14340318 I a score=235619.000000 s hg38.chr14_KI270725v1_random 123521 27 + 172810 AAACAAAAATTGTCTAT-AGATTTTGAT------------ s panTro5.chr1 126705612 27 + 228573443 AATAAAAAATTGTCTAT-AGATTTTGAT------------ i panTro5.chr1 C 0 C 0 s panPan2.chr7 74685833 27 + 162613886 AATCAAAAATTATCTAT-AGATTTTGAG------------ i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 106835 27 + 126596 CATCAAAAATTGTCTAT-AGACTTTGAT------------ i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5693885 27 + 72422247 AATCAGAAATTGTCTAT-AGATTTTGAT------------ i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146216 27 - 99891981 AATAAAAAATTGTCTGT-AGATTTTGAT------------ i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376383 26 + 185818997 AATCA-AAATTGTCTAC-AGATTTTGAT------------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125022129 26 - 192294377 AATCA-AAATTGTCTAC-AGATTTTGAT------------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369212 26 - 3123512 AATCA-AAATTGTCTAC-AGATTTTGAT------------ i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7602882 26 - 10077455 AATCA-AAATTGTCTAC-AGATTTTGAT------------ i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540621 26 - 127223203 AATCA-AAATTGTCTAT-AGATTTTGCT------------ i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 672516 26 + 1799296 AATCA-AAATTGTCTAC-AGATTTTGAT------------ i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5208867 26 - 6934359 AATCA-AAATTGTCTAT-AGATTTTGAT------------ i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20084915 27 + 128169293 AATCAGCAGTGGTCTGT-AGATTTTGAT------------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666384 27 + 18371965 AATCAGCAGTGGTCTGT-AGATTTTGGT------------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2200462 27 - 3566421 AATCAGCAATTGTCTGT-AGATTTTGAT------------ i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7399115 27 + 9267652 AATCAGCAGTGGTCTGT-AGATTTTGAT------------ i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1643966 28 - 14340318 AAAAAAATACTGTCTATGAGATTTTGAT------------ i otoGar3.GL873564 I 4870 I 13 s dasNov3.JH578441 308163 36 - 1446996 AATCC-AAATTG--TAA-TATTTTTCATGACCCAATTCAA i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4103456 2552 + 55844845 I a score=3463908.000000 s hg38.chr14_KI270725v1_random 123548 315 + 172810 GATAAAAT-TTAAAAATCTACTATATTTAGTTAGTCACAAAAA-ACCAGGTTGTGGGAACATATTTGGTCA-----ATAAAACA--CCCCTACCAAATGCTGACAAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTGAAAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCATAATCCACTGCTGTCTCCTACATTCAGTTTCTCAGTCTGTGCTCTTTTAATT--TTGGGGGGAGGGAAGCCAGTCCTTTAA--AGCGATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC s panTro5.chr1 126705639 315 + 228573443 GATAAAAT-TTAAAAATCTACTATATTTAGTTAGTTACAAAAA-ACTAGGTTGTGGGAACATATTTGGTCA-----ATAAAACA--CCCCTACCAAGTGCTGACAAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTGAAAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCATAATCCACTGCTGCCTCCCACATTCAGTTTCTCAGTTTGTGCTCTTTTCATT--TTGCTGGGAGGGAAGCCAGCCCTTTCA--ACCAATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74685860 314 + 162613886 GATAAAAT-TT-AAAATCTACTATATTTAGTTAGTTACAAAAA-ACTAGGTTGTGGGAACATATTTCTTCA-----ATAAAACA--CCCCTACCAAGTGCTGACAAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTGAAAGAAT--GC-TTCCAAACCTG-AGGTGATCCCTGAGAACAGCATAATCCACTGCTCTCTCCCACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TTGCGGAGAGGGAAGCCAGCCCTTTAA--ACCAATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 106862 311 + 126596 GATAAAAT-TTAAAAATCTACTATAT----TTAGTATCAAAAA-ACTAGGTTGTGGGAACATAGTTGGTCA-----ATAAAACA--CCCCTACCAAATGCTAACAAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTGAAAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCATAATCCACTGCTGTCTCCCACATTCAGTTTCTCAGTCTGTGCTCTTTCAATT--TTGGGGGGAGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGAAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5693912 315 + 72422247 AATAAAAT-TTAAAAATCTACTATATTTAGTTAGTTACAAAAA-ACTAAGTTGTGGGAACATATTTGGTCA-----ATAAAACA--CCCCTACCAAATGCTGACAAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGATTAATCTGAAAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCCTAATCCACTGCCGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTGTTAATT--TTGGGGAGCGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146243 315 - 99891981 GATAAAAT-TTAAAAATCTACTATATTTAGTTAGTTACAAAAA-ACTAGGTTGTGGGAACATATTTGGTCA-----ATAAAACA--TCCCTACCAAATGCTGACAAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCATATGGCCTGAGATGGGTTAATTTGAAAGAAT--GC-TTCCAAATCTG-AGGTGACCCCTGAGAACAGCGTAATTCACTACTGTCTCTTACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TTGGGGGGAGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCATGATGGCAGAACCAAGGAGTGTGGAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376409 311 + 185818997 AATGAAAT-TTAAAAAT-TACTATATTTAGTTAGTTCCAAATA-ACTAGGTTGTGGGACCATATTTGTTTA-----ATAAAACA--CCCCTACTAAATGCTG--GAAAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATAGCCTGAGATGGGTTAATTTG-AAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCATAGTTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TCGGGGGGAGGGAAGCCAGTCCTTTAA--ACTGATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125022155 311 - 192294377 GATGAAAT-TTAAAAAT-TACTATATTTAGTTAGTTTCAAATA-ACTGGGTTGTGGGACCATATTTGTTTA-----ATAAAACA--CCCCTACTAAATGCTG--GGAAAAAAAAGGTAGGTACCACCTTTCTTCTCTGCAGATAGCCTGAGATGGGTTAATTTG-AAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCATAGTTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TCGGGGGGAGGGAAGCCAGTCCTTTAA--ACTGATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369238 311 - 3123512 GATGAAAT-TTAAAAAT-TACTATATTTAGTTAGTTCCAAATA-ACTAAGTTGTGGGACCATATTTGTTTA-----ATAAAACA--CCCCTACTAAATGCTG--GAAAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATAGCCTGAGATGGGTTAATTTG-AAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAACAGCATAGTTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TCGGGGGGAGGGAAGCCAGTCCTTTAA--ACTGATCTTCAGCATGATGGCAGAGCCAAGGAGTGTGGAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7602908 312 - 10077455 GATGAAAT-TTAAAAAT-TACTATATTTAGTTAGTTCCAAATA-ACTAGGTTGTGGGACCATATTTGTTTA-----ATAAAACA--CCCCTACTAAATGCTGA-AAAAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTG-AAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAAGAGCGTAGTTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TCGGGGGGAGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCAAGATGGCAGAGCCAAGGGGTGTGGAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540647 311 - 127223203 GATGAAAT-TTAAAAAT-TACTATATTTAGTTAGTTCCAAATA-ACTAGGTTGTGGGACCATATTTGTTTA-----ATAAAACA--CCCCTACTCAATGCTG--AAAAAAAAAAGTTAGGCACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATCTG-AAGAAT--GC-TTCCAAACCGG-AGGTGACCCCTGAGAACAGCGTAGTTCACTGCTGTCTCCAACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TCGGGGGGAGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCATGATGGCGGAGCCAAGGACTGTGGAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 672542 311 + 1799296 GATGAAAT-TTAAAAAT-TACTATATTTAGTTAGTTCCAAATA-ACTAGGTTGTGGGACCATATTTGTTTA-----ATAAAACA--CCCCTACTAAATGCTG--AAAAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTG-AAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGAAGAGCGTGGTTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTTTTAGTT--TCGGGGGGAGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCATGATGGCAGAGCCAAGGGGTGTGGAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5208893 312 - 6934359 GATAAAAT-TTAAAAATCTACTATATTTAGTTAGTTCCAAATA-ACTAGGTTGTGGGACCATATTTGGTCA-----ATAAAACA--CCCCTACTAAATACCG--GAGAAAAAAAGTTAGGTACCACCTTTCTTCTCTGCAGATGGCCTGAGATGGGTTAATTTG-AAGAAT--GC-TTCCAAACCTG-AGGTGACCCCTGAGGACAGCATAGTTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTTGTGCTCTTTTAATT--TCGGGGAGAGGGAAGCCAGTCCTTGAA--ACCGATCTTCGGCATGATGGCAGAGCCAAGGAGTGTGGAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20084942 309 + 128169293 GATAAAAT-TTCAAAGTCTACTATAC----TTAGTTCCAAAAA-ACTAGG-TGTGGGAACATATTTGGTCA-----ACAGAACA--CCCCAACCAAATGCTGACAAAAACAAAAGTTAGATAGCACCTTCCTTCTCTGCAGATGACCTGAGATGGGTTAATTTGGAAGAAT--GT-TTCTAAACCTC-AAGTGACCCCTGAGAACAGGATAATTCACTGCTGTCTCCTACATTCAGTTTCTCAGTTT-TGTTCTTTTAATA--ACTTGGGGAGGGAAGCCAGTCCTTTAA--ACTGATCTTCAGCATGATGGCAAATCCAGTGAGTGTGGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666411 276 + 18371965 GATAAAAT-TTAAAAGTCTACTATATTTAGTTAGTTCCAAAAA-ACTAGG-TGTGGGAACATATTTGGTC------ACAGAACA--CCCCTACCAAATGCTGATAAAAACAAAAGT----TAGCACC--------------------------------ATGTGGAAGACT--GT-TTCTAAACCTC-AAGTGACCCCTGAGAACAGGATAATTCACTGCTGTCTCCTACATTCGGTTTCTCAGTTT-TGTTCTTGTAATA--TCCTGGGGAGGGAAGCCAGTCCTTTAA--ACCGATCTTCAGCACGATGGCAAATCCAATGAGCGTGGAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2200489 312 - 3566421 TTTAAAAT-TTAAAAGTCTATTATATTTAGTTAGTTCCAAAAA-ACTAGG-TGTGGAAACGTATTTGGTC------ACAGAACA--CCCCTACCAAATGCTGACAAAAACAAAAGTTAGATAGCACCTTCCTTCTCTGCAGATGACCTGAGATGGGTTAATTTGGAAGAAT--GT-TTCTCAACCTC-AAGTGACCCCTGAGAACAGAACAATTCACTGCTGTGTCCTACATTTGGTTTCTCAGTTT-TATTCTTTTAAAA--TCTTGGGGAGGGAAGCCAGTCCTTTAA--ACTGATCTTCAGCATGATGGCAAATCCAATGAGTGTGGAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7399142 311 + 9267652 GATAAAAT-TT--AAGTCTACTATATTTAGTTAGTTCCAAAAA-ACTAAG-TGTGGGAACATATTTGGTCA-----ACAGAACA--CCCCTACCAAATGCTGACAAAAACAAAAGTTAGATAGCACCTTCCTTCTCTGCAAATGACCTGAGGTGGGTTAATTTGAAAGAAT--GT-TTCTAAACCTC-AAGTGACCCCTGAGAACAGCATAATTCACTGCTGTCTCCTACATTTGGTTTCTCAGTTT-TGTTCTTTTAATA--TCTTGGGGAGGGAAGCCAGTTCTTTAA--ACTGATCTTCAGCAAGATGGCAAATCCAATGAGTGTGGAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1644007 204 - 14340318 GATAAAAT-TTCAAAATCAATTAGATTTTGTTACTTCCAAAAT-TCTTTG-ACTGTGATCA---------A-----AGAAAACA--CCCCTACGAAATGCTAACAAAAGCAAACTTAA------ACACGCCCTCTCTACACATGTCCTGGGATCTGCTAATGCT------------TTCCAAACTTT-------------------------TCCACCCCTG---------------------------------------------------------------TTAAA--CCCCAGCTTCAGCAGGAGGGT-GAGCCCACAAACGGAGAC i otoGar3.GL873564 I 13 I 44 s canFam3.chr18 4106008 312 + 55844845 GATAAAATATTTAAAATTTGTTAGACTTGATTAACTTCAAAAATACTAGGCTGTGGGG-CATATTCAGTGATTCCTACCAAACA--TCCTCACTAAATGCTAACAAATGCAAATCTTAGATTTCCTGTTTCTTCTCTGCAGCTACCCTGAAATCTCTTAATTTGAAAGACCTGTT-TTCTAAAACTG-AAGTGACATCTGAGAACAGAGTAATTTACTCTGGTTTCCTAAACTCAG-TTCTCAATTTGTGTTCTTTTAATTCATTGGAGGAAAGGGAGCCAGTCCTTTAAAGACTCATGTGCA---------CAGAGCCA-----TGTGCAT i canFam3.chr18 I 2552 I 4 s dasNov3.JH578441 308199 298 - 1446996 GGTAAAAT-TTTAAAATCTTTTAGATTTGATTACTTCCAGAAA-TTCAGGCAGTAGGAACACACATTATCA-----ATAAAACACTCCTCTACAAAGTA-----GCAAAACAAGGTTACACATCCTATTCCTTGTCTTAAAATTACCTGTAGTAAATTCATTTGAAACAAT--TCTTTCTATACTTGCAGGTGACTGCTGAGAACAGCATAATTTGCACCCTTCTCCTCAA--------CCCAATTTGTTTTCTTTTAGTA--TATTGGGGAGGGA--------TTTCAA--ACAAATCTGCAGCATGATGCCTTTGCCAATTTGTTTAAAA i dasNov3.JH578441 C 0 C 0 a score=492641.000000 s hg38.chr14_KI270725v1_random 123863 45 + 172810 AGGTGGCACGG-TGTCTGACTTTGTTCCATCAGCCACTTGGGCTTT s panTro5.chr1 126705954 45 + 228573443 AGGTGGCACGG-TGTCTGACTTTGTTCCAGCAGCCACTTGGGCTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74686174 45 + 162613886 AGGTGGCACGG-TGTCTGACTTTGTTCCAGCAGCCACTTGGGCTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 107173 45 + 126596 AGGTGGCATGG-TGTCTGACTTTGTTCCAGCAGCCACTTGGGCTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5694227 45 + 72422247 AGGTGGCGCGG-TGTCTGACTTTGTTCCAGCAGCCACTTGGGCTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146558 45 - 99891981 AGGTGGCATGG-TGTCTGACTTTGTTCCAGCAGCCACTTGGGCTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376720 45 + 185818997 AGGTGGCACGG-TCTGTGACCTTGTTCCAGCAGCCACTTGGGCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125022466 45 - 192294377 AGGTGGCACGG-TCTGTGACCTTGTTCCAGCAGCCACTTGGGCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369549 45 - 3123512 AGGTGGCACGG-TCTGTGACCTTGTTCCAGCAGCCACTTGGGCTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7603220 45 - 10077455 AGGTGGCACGG-TCTGTGACCTTGTTCCAGCAGCCACTTGGGCTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121540958 45 - 127223203 AGGTGGCACGG-TCTGTGACCTTATTCCAGCAGCCACTTGGGCTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 672853 45 + 1799296 AGGTGGCACGG-TCTGTGACCTTATTCCAGCAGCCACTTGGGCTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5209205 45 - 6934359 AGGTGGCACGG-TGTGTGACCTTGTTCCAGCAGCCACTTGGGCTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20085251 45 + 128169293 AGGTGGCACCA-TGTCTGACTTTGTCCCAGCAGCCACTTGGGCTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666687 43 + 18371965 AGGTGGCACCC-TGTCTGAC--GGTCCCAGCAGCCACTTGGGCTTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2200801 45 - 3566421 AGGTGGCACCG-TGTCTGCCTTTGTCCCAGGAGCCACTTGGGCTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7399453 45 + 9267652 AGGTGGCACTG-TGTCTGACTTTGTCCCAGCAGCCACTTGGGCTTT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4106324 46 + 55844845 AGATGGCAAGGCTGTGGGTGTCTTTCCCAGCAGCTATTTTATGATT i canFam3.chr18 I 4 C 0 s dasNov3.JH578441 308497 33 - 1446996 AGATCATGCAG-CTGTTGTCAGTGTTTCCTCGGC------------ i dasNov3.JH578441 C 0 C 0 e otoGar3.GL873564 1644211 44 - 14340318 I a score=5782453.000000 s hg38.chr14_KI270725v1_random 123908 608 + 172810 CTCTGGGTCTT-CTCTGCCCTAGGGATAGCACTACTATTGAAAACATGTCTTTGTGACATTGTCTATGCCAGGAACTCCCAACATATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAGAGGTGTGCTGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAATATTTTTAAATACATTGTCGATCACCAAAAGGA-GCATAAGGGCTT----TATTGGTTTGTAGCAGATG-TATTAATAGCCCAGCCCCTATTCCTTA-CCTGTAGCTGCTGGGAAGAAAACCATTCT-TAACACTCTA-----CAAGGTCTCATCTCC-AGAATTTGCACCT--GTTTCTAGCTGAGGACTTTCTCTAGCAGCACGGGAGCTTGTGATTGGGCAT------------------GAAGTGGG-AAGAAAAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------ATC----------TCCCTGGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCACGTAGCTTCCCATAAA----ATTAAGCCCAGATATCT-------------------------------------AACACAGGAACTTACCTCTTAACACG--TGTGGTATTGGCTTGTCTCTCTTTC-----CTGTTTTATTTTGT------TCTCTTTTCCT---TGTCTCACTTTCAC----TGTG--------TCCTCACTCCT----------GCTTT s panTro5.chr1 126705999 608 + 228573443 CTCTGGATCTT-CTCTGCCCTAGGGATAGCACCACTATTGAAAACATATCTTTGTGACATTCTCTATGCCAGGAACTCCCAACACATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACAAAGAGGTGTGTTGT-TTGTTTCTTTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAATATTTTAAAATACATCGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTAGCAGATG-TATTAATAGCCCAGACCCTATTCCTTA-CCTGTAGCTGCCTGGAAGAAAACCATTCT-TAACACTCTA-----CAGGGTCTCATCTCC-AGAATTTGCAGCT--GTCTCTAACTGAGGACTTTCTCTAGCAGCACGGCAGTTTGATACTGGGCAT------------------GAAGTGGG-AAGAAAAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------ATC----------TCCCTGGATTCAGTAATGTA--ATTCTGAGG-CATGTTCCACATAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACAGAGGAACTTGCCTCTTAACACG--TGTGGTACTGGCTTTTCTAACTTTC-----CTGTTTTATTTTGT------TCTCTCTTCCT---TGTCTCACTTTCAC----TGTG--------TCCTCACTCCT----------GCTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74686219 607 + 162613886 CTCTGGATCTT-CTCTGCCCTAGGGATAGCACCACTATTGAAAACATATCTTTGTGACATTCTCTATGTCAGGAACTCCCGACACATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAGAGGTGTGCTGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAAAATTTT-AAGTACATTGTCGATCACCAAAAGGA-GCATAAGTGGTA----TATTGATTTGTAGAAGATG-TATTAGTAGCCCAGCCCCTATTCCTTA-CCGGTAGCTGCTGGGAAGAAAACCATTCT-TAACACTCTA-----CAGGGTCTCATCTCC-AGAATTTGCACCA--GTTTCTAGCTGAGGACTTTCTCTAGCAGCACGGGAGTTTGATACTGGGCAT------------------GAAGAGGG-AAGAAAAG-------------G--------------TGA-GGG-------TAACTA------AAAAGA-------------ATC----------TCCCTGGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCACATAGCTTCCCATAAA----ATTAAGCTCAGATATCT-------------------------------------AACACAGGAACTTGCCTCTTAACACG--TGTGGTACTGGCTTTTCTATCTTTC-----CTGTTTTATTTTGT------TTTCTCTTCCT---TGTCTCACTTTTGC----TGTG--------TCCTCACTCCT----------GTTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 107218 607 + 126596 CTCTGGGTCTT-CTCTGCCCTAGGGATAGCACTACTATTGAAAACATGTCTTTGTGACATTCTCTATGCCAGGAACTCCCAACACATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAGAGGTGTGCTGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-CATCATCTAATATTTTTAAATACATTGTTGATCACCAAAAGGA-GCATAAGGGCTT----TATTGGTTTGTAGCAGATG-TATAAATAGCCCAGCCCCTATTCCTTA-CCTGTAGCTGCTGGGAAGAAAACCATTCT-TAACACTCTA-----CAAGGTCTCATCTCC-AGAATTTGCACCT--GTTTCTAGCTGAGGACTTTCTCTAGCAGCACGGG-GCTTGATACTGGGCAT------------------GAAGTGGG-AAGAAAAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------ATC----------TCCCTGGATTCAGTGATGTA--ATTCTGAGG-CATGCTCCACATAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAGGAACTTACCTCTTAACACG--TGTGGTATTGGCTTTTCTATCTTTC-----CTGTTTTATGTTGT------TCCCTTTTCCT---TGTCTCACTTTCGC----TGTG--------TCCTCACTCCT----------GCTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5694272 600 + 72422247 CTCTGGGTCTT-CTCTGCCCTAGGGATAGCACCACTATTG-AAACATGTCTTTGTGACATTCTCTATGCCAGGAACTCCCAACACATTTTCCTTGAAACTG-----ATGAATAA---AAATAAACCAAGAGGTGAGCTGC-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAAGATTTTTAAATACATTGTCGATCACCAAAAGGA-GCATAAAGGCTT----TATTGATTTGTAGCAGATG-TATTAATAGCCCAGCCCCTATTCCTTA-CCTGTAGCTGCTGGGAAGAAAACCATTCT-TAACACTCTA-----CAAGGTCTCATCTCC-AGAATTTGCACCT--GTTTCTAGCTGAGGACTTTCTCCAGCAGCACGGGAGCTCGTTACTGGGCAT------------------GAACTGGG-AAGAAAAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------ATC----------TCCCTGGATTCAGTGACGTA--ATTCTCAGG-CATGTTCCACATAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAGGAACTTGCCTCTTAACATG--TGTGGTATTGGCTTTTCTGTCTTTC-----CTGTTTTATTTTAT------TCTCTCTTCCT---TGTCTCATTTTCAC------TG--------TCCTCACTCCT----------GCTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44146603 609 - 99891981 CTCCGGGTCTT-CTCTGCCCGAGGGATAGCACCACTGTTGAAAACATGTCTTTGTGACATTCTCTATGCCAGGAACCCCCAATGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAGAGGTGTGCTGT-TCATT--TGTTTCCTCCTTTCTGCAGCCCCTCTT-GATCACCTAATATTTT-AAATACATTGTCAATCACCAGAAGGA-GCATAAGGGGTA----TATTGATTTGTAGCAGATG-TATTAATAGCCCAGCCCCTATCCCTTA-CCTGTAGCTGCTGGGAAGAAAACCATTTT-TAACTCTCTA----CCAAGGTCTCATCTCC-AGAATTTGCACCT--GTTTCTAGCCGAGGACTTTCTCTTGCAGCACCGGAGCTTGTTACTGGGCAT------------------GAAGTGGG-AAGAAAAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTC----------TCCCTGGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCACATAGCTTCCCACAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAAGAACTTGCCTCTTAACACA--TGTGGTATTGGCTtttctatttttc-----ctgttttatttttc------tctctcttcctttctgtttcactttcac----tGTG--------TCCTCACTCCT----------GCTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52376765 608 + 185818997 CTCCGGGTCTT-CTTCGCCCTAGGGATAGCATTATTACTGGAAACATGTCTTTGTGACGTTCTCTATGCCAGGAACTCCCGATGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCATGAGGTGTGCTGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAATATTTT-AAATACATTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCGGAT----------GCCCAGCCCCTTTCCCTTA-CCTGTAGCTGCTCGGAAGAAAACCATTGT-TAACACTCTA-----CAAGGTCTCATCTCC-AGTATTTGCACCT--GTTTCTACCTGAGGACTTTCTCTAGCAGCATGGGAGCTTATTACTGGGCAT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTC----------TCCCTAGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCGCGTAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAAGAACTTGCCTCTTAACACA--TATGGTATCGGCttttctatctttcctgttttttttttttttttctctc-tctctcttcct---cgtctcactttcac----tgtg--------tcctcactcCT----------GCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125022511 607 - 192294377 CTCCGGGTCTT-CTTCGCCCTAGGGATAGCATTATTACTGGAAACATGTCTTTGTGACGTTCTCTATGCCAGGAACTCCCGATGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCATGACGTGTGCTGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAATATTTT-AAATACATTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCGGAT----------GCCCAGCCCCTTTGCTTTA-CCTGTAGCTGCTCGGAAGAAAACCATTGT-TAACACTCTA-----CAAGGTCTCATCTCC-AGTATTTGCACCT--GTTTCTACCTGAGGACTTTCTCTAGCAGCATGGGAGCTTATTACTGGGCAT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTC----------TCCCTAGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCGCGTAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAAGAACTTGCCTCTTAACACA--TATGGTATCGGCTtttctatctttc-ggttttttttttttttttctctc-tctctcttcct---cgtctcactttcac----tgtg--------tcctcactcCT----------GCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 369594 603 - 3123512 CTCCGGGTCTT-CTTCGCCCTAGGGATAGCATTATTACTGGAAACATGTCTTTGTGACGTTCTCTATGCCAGGAACTCCCGATGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCATGAGGTGTGCTGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAATATTTT-AAATACATTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCGGAT----------GCCCAGCCCCTTTCCCTTA-CCTGTAGCTGCTCGGAAGAAAACCATTGT-TAACACTCTA-----CAAGGTCTCAATTCC-AGTATTTGCACCT--GTTTCTACCTGAGGACTTTCTCTAGCAGCATGGGAGTTTATTACTGGACAT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTC----------TCCCTAGATTCAGTGATGTC--ATTCTGAGG-CATGTTCCGCGTAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAAGAACTTGCCTCTTAACACA--TATGGTATCGGCTTTtctatctttc-----ctgtttttttttttctctc-tctctcttcct---cgtctcactttcac----tgtg--------tcctcactcCT----------GCTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7603265 593 - 10077455 CTCCGGGTCTT-CTCCACCCTAAGGATAGCACTATTACTGCAAACATGTCTTTGTGACAT----TATGCCAGGAACTCCGGATGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAAATGTGTGCTGT-TTGTTTCTGTTTCCTCTTTTCTGCAGCCCTTCTT-GATCATCTAATATTGT-AAATACATTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCAGAT----------GCCCAGCCCCTTTCCTTTA-CCTGTAGTTGCTGGGAAGAAAACCATTTT-TAACACTCTA-----TGAGGTCTCATCTCC-AGTATTTGCACCT--ATTTCTACCTGAGGACTTTCTCTAGCAGCATGGGAGCTTATTACTGGGCAT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTT----------TCCCTAGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCACGTAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAGGAACTTGCCTCTTAACACA--TGTGCTATTGGCTTTTCTATCTTTC-----CTGTTTTTTTTTT-------TCTCTCTTCCT---CGTCTCACTTTCAC----TGTG--------TCCTCACTCCT----------GCTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121541003 604 - 127223203 CTCCGGGTCTT-CTCTGCCCTAGGGATAGCACTATTACTGCAAACATGTCTTTGTGACATTCTCTATGCCAGGAACTCCCGACGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAAATGTGTGCTGT-TTGTTTCTGTTTCCTCTTTTCTGCAGCCCTTCTT-GATCATCTAATATTTT-AAATACATTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCAGAT----------GCCCAGCCCCTTTCCCTTA-CCTGTAGCTGCTGGGAAGAAAACCATTTT-TAACACCCTA-----CGAGGTCTCATCTCTAAGTATTTGCACCT--ATTTCTACCTGAGGACTTTCTCTAGCAGCATAGGAGCTTATTACTGGGCAT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTT----------TCCCTGGATTCAGTGATGTG--ATTCTGAGG-CATGTTCCACGTAGCTTCCCATAGA----ATTAAGCCCAGATATCT-------------------------------------AACACGGGAACTTGCCTCTTAACACA--TGTGCTATTGGCTTTTCTATCTTTC-----CTGTGTTTTTTTTTTTTTC-TCTCTCTTCCT---CGTCTCACTTTCAC----TGTG--------TCCTCACTCCT----------GCTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 672898 598 + 1799296 CTCCGGGTCTT-CTCCGCCCTAAGGATAGCACTATTACTGCAAACATGTCTTTGTGACATTCTCTATGCCAGGAACTCCCGACGCATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAAATGTGTGCTGT-TTGTT--TGTTTCCTCTTTTCTGCAGCCCTTCTT-TATCATCTAATATTTT-AAATACATTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCAGAT----------GCCCAGCCCCTTTCCTTTA-CCTGTAGCTGCTGGGAAGAAAACCATTTT-TAACAGTCTA-----CGAGGTCTCATCTCC-AGTATTTGCACCT--ATTTCTACCTGAGGACTTTCTCTAGCAGCATGGGAGCTTATTGCTGGGCAT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TAACTA------AGAAGA-------------TTT----------TCCCTAGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCACGTAGCTTCCCGTAGA----ATTAAGCCCAGATATCT-------------------------------------AACACAGGAACTTGCCTCTTAACACA--TGTGCTATTAGcttttctatctttc--------tgttgttttttttttt-tctctcttcct---cgtctcacttTCAC----TGTG--------TCCTCACTCCT----------GCTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5209250 597 - 6934359 CTCCGGGTCTT-CTCCGCCCTAGGGATAGCACTATTACTGGAAACA--TCTTTGTGACATTCTCTATGCCAGGAACTCCCGACACATTTTCCTTGAAACTGATGAAATGAATAA---AAATAAACCAAGAGGTGTGCCGT-TTGTTTCTGTTTCCTCCTTTCTGCAGCCCTTCTT-GATCATCTAATATTTT-GAATACCTTGTCGATCACCAAAAGGA-GCATAAGGGGTA----TATTGATTTGTACCAGAT----------GTCCAGCCCCTTTCCCTTA-CCTGTAGCTGCTGGGAAGAAAACCATTTT-TAACACTCTA-----CAAGGTCTCATCTCC-AGTATTTGCACCT--GTTTCTACCTGAGGACTTTCTCTAGCAGCTTGGGAGCTTAGTACTGGGCTT------------------GGAGTGGG-AAGAAGAG-------------G--------------TGG-GGG-------TAACCA------AGAAGA-------------TTC----------TCCCTAGATTCAGTGATGTA--ATTCTGAGG-CATGTTCCATGTAGCTTCCCATAAA----ATTAAGCCCAGATATCT-------------------------------------AACACAGCAACTTGCCTCTTAACACA--TGTGGTATTGGCTTTTCTATCTTTC-----CTGTTTTATTTTGTT-----TCCCTCTTCCT---CGTCTCACTTTCAC----TGTG--------TCCTCACTCCT----------GCTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20085296 483 + 128169293 CTCCGGGTCTT-CCCTGAACTTGGGATAGCACCACTACTGGCAACATGTCTTTGTGACATTCCCTAGGTCAGGAACTCCCAATGCATTTTCCTTGAAACTG-----ATGAATAA---AATTACACCAAG-TGTGTGCTGT-TTATT--TGTTTTCTCC-TTCTACAGCACTTCTT-GATCATCTAATAT-----------------------------------------------------------------------------------------------------TCTGCTGGGAAGAAAACCATTTT-CAACACTCTA-----CAAGGTCTCATGTCC-AGTACTTGCACCT--GTTTCTAGCTGAGGACTTTCTCTAGCAGCAC-GGAGCTTGTTACTGGGTGT------------------GTGGTGGG-AAGAAGTG-------------G--------------TGA-GGG-------AATCTA------AGGAGG-------------GTC----------TCCCCGGATTC---------------TGAGG-TGTGTTCCACGTAGCATCCCATAG--------ATGCTCACGTATCT-------------------------------------GACACAGGAACATGAGTCTTAACACA--TGCCATATTGGCTTTTCTACCTTTC-----CTGTTTTATTTTT-------TATCTCTT------TGTCTCAATTTTAC----TATG--------TCCTCACTCCT----------GCTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17666730 497 + 18371965 CTCCAGGTCTT-CTGTGAAGCGGGGATAGCCCCACTGCTGGACACATGTCTCTGTGACATTCCCTGTGCCAGGAACTCCCAGTGCATTTTCCTTGAAACTG-----ATGAATAA---AATTAAACCAAC-GGTGTGCTGT-TTGTT--TGTTTTCTCC-TTCTGCAGCACTTCTT-GATCATCTAATAT-----------------------------------------------------------------------------------------------------TCTGCCGGGAAGAAAACCATTTT-CAACACTCTA-----TGAGGCCTCATGTCC-AGGACTTGCACCT--GTTTCTGGCTGAGGGCTTTCTCCAGCAGCACGGGAGCTTGTTACTGGGCGT------------------GGGGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TTTCTA------AGGAGG-------------CTC----------TTCCTGGGCTCAG-------------TGAGG-TGTGTTCCACGCAGCATCCCATAGA----ATTAAGCTCACGTACCT-------------------------------------GACACAGGAACATGCGTCTCAAAACA--TGCCGTATTGTCTTTTCTACCTTTC-----TTAATTTATTTTTTTTTCTCTCTCTTTT------GGTCTCAGTTTCGC----TATG--------TCCTCACTCCT----------GCTTT i saiBol1.JH378145 C 0 I 449 s cebCap1.NW_016107540v1 2200846 497 - 3566421 CTCCGGGTCTT-CCCTGAACTAGGGATGGCACCACTACTGGAAACATGTCTTTGTAACATTCCCTATGCCAGGAATTCCCAATGCATTTTCCTCGAAACTG-----ATGAATAA---AATTAAACCTAG-TGTGTGCTGT-TTGTT--TGTTTTCTCC-TTCTGCAGCACTTCTT-GATCATCTAATAT-----------------------------------------------------------------------------------------------------TCTGCTGGGAAGAAAACAATTTT-CGACACTCTA-----CAAGGTCTCATGTCC-AGTACTTGCACCT--GTTTCTAGCTGAGGACTTTCTCTAGCAGCACGGGAGCTTGTTACTGGGCGT------------------GGGGTGGG-AAGAAGAG-------------G--------------TGA-GGG-------TATCTA------AGGAGG-------------GTC----------TTCCTGGATTCAGTGCTGCT--ATTCTGAGG-TGTGTTCCACGTAACATCCCATAGA----ATTAAGCTCACGTGTCT-------------------------------------GACAGGGGAACATGTGTCTTAACACA--TGCCGTATTGTCTTTTCTACCTTTC-----CCGTTTTATTTTTT------TCTCTCTT------T-----AATTTCAC----TATG--------TTCTCACTCCT----------GCTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7399498 592 + 9267652 CTCTGGGTCTT-CCCTGAACTAGGGATAGCACCACTACTGGAAACATGTCTTTGTGACATTCCCTATTCCAGGAACTCCCAATGCA-TTTCCTTGAAACTG-----ATGAATAA---AATTAAACTAAG-TGTGTGCTGT-TTGTT--TGTTTTCTCC-TTctgcagcacttctt-gatcatctaatatttt-aaaaacattgtgaatcaccaaaagga-gcataAGGGGAA----TACAGATTTGTAGCAGATG-TATTCATAGCCCACCCCCTATCCCTTA-CCTGTATCTGCTGGGAAGATAACCATTTT-CAACACTCTA-----CGAGGTCTCATGTCC-AGTACTTGCACCT--GTTTCTAGCTGAGGACTTTCTCTAGCAGCACGGGAGCTTGTTACTGGGTGT------------------GGGGTGGG-AACAAGTG-------------G--------------TGA-GGG-------TATCTA------AGGAGG-------------GTC----------TCCCTGGATTCAGTGCTGCA--ATTCTGAGG-TGTGTTCCATGTAGCATCCCACAGA----ATTAAGCTCACGTATCT-------------------------------------GACACGGGAACATGCGTCTTAACACA--TGCCGTATTGGCTTTTCTACCTTTC-----CTGTTTTATTTT--------TTTCTCTT------TGTGCCAATTTCAC----TATG--------TCCTCACTCCT----------GCTTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1644255 656 - 14340318 CTACGTGTCTG-TCCTTCACTGGTGAGAGCACCACCATTGGACATGTGTCTTTATCACATTCTCTATATCAGCAACTCTCAAAGCATTTTCCTCGTGACTGAGGAAATGAATAAAATAAATGAATAAATAAGGCTACTGTGTTGTTGGCATATC-----TTCCACAGCTTTTCTT-GGTCCTCTAACATTCCATGGTTCCTTGTGAATCACTA-AAGGA-GAAGAAGGGACACAGGTGTGTACCTGTAGTAGATGTTTTTAGCTGTCCACCCAGTGTCCCCTCTTCTGCAGCTGCTGGGAAGAAAATCCTTTC-CAGCCCCGTAGGGGGTGGGGTCTCTGGTGC-AGCCCCAGCCCCT-CCTTCCTCCCTGAGGACCTTCTCCAGCAGCCCCGGAGCT-GCTGCAGGGCAC------------------GGAGGGGACAAGAGAGG-------------G--------------TGACTGG-------TGACAC------AGGGG----------------C----------TCCCTGCCTTC-CCACTGTA--ACCTTGG------GCTCCGTGTAGCTTCCTACAGG----CCAGAGCCCGACTCTCTCCATGATGCATGTGGGTTTGGCAGAGTCCAGAGACTGATCCGGGGGACTTGCTCCATGATGCA--CGTGGCGTTGGCTTCACAGTGTTTC-----CTGTTTTATTTGC-------TCTCCTTTCTA---TGTCTCACTTTCAC----GATG--------TTTTCGTGTTTCACTATGTTGGCTTT i otoGar3.GL873564 I 44 C 0 s canFam3.chr18 4106370 639 + 55844845 TTTCAGGTCTTGTCCTTCCCTCGTGACACCATCACTACTTGAAACATGTTTTTGCTACATTCTCTATGCCAGCCACTCCCAAAACATTTTCCCTGAAACTGAAGGAATGAATAA---AAATAAGCCAAGAGATA-------TTATC-------------TTCTACAAGATTTCTA-GGTGTTCTAA-ATCTA-AAATACAATGTGAATCACCAAATGAA-GAATAAAGGCTACAGATGTGTATTTATACCAGATG-TTCGAATGGCCTGTCCTGTGTTTTCT--CGCAAAGCTGCTGGGAAGAAAACTATTTTCCGACACTTGT-----CAGGG--TAACCTCC-AGCAGCTTAATCTCCATTTCTACATAAGGACTAACTCTAGCACCAGAGGAAATAGTTACTGGGGAT------------------GGGAAGAG-AAAAATGGTCAAACTAACATCT--------------TAA-GGGCACCTCACAATTA------AGGAGAGGTAGATATATAGGTC----------TCCCTCTCTTTGGTACTACA--GTTTTGAGGTTCTGTTCCACCTGGCTTCCAACAGAATTGATTGAGTTTTGGTGTCT-------------------------------------AGCACAAGAATTTGTTTATTAACATATTTATGTTAATG-CTTTTCTAT-TTGC-----TGGCTTTATTTCTTT-----CCTCTCTTCCT---TGTCTCCCTTTCACATGTTTTGAAGATTATTCCCCACCCCC----------C---- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 308530 502 - 1446996 --------------------------------------------------------------------------------------------------------------------------------------------------AGGGACTTCTGCTCCCTGAAGCATTTCTTAGGTCTTTTCATATTCTAAAATAC-CTGTGAATCACCTGGATCAGGGATTGGTGATAAAGGTGGGTATTTGTAGTAGATG---TAAATAGTGCACCCCATATCCTCTAAGCAGAAGCATCTGTGAAGAAGACAATTTC-CAACTCTCTG----GCAGGGCCCCACCTTT-TGGATTTGCATCTCCATTTCTTCCTGAGGGTGCTTTCTAGTATCACCATGGTTTGCTGCAGGGCATTACAAGCGCAGTAGGTGCAAACAGGA-AGGAAGAG-------------GGTGGGCGCACAGCTTGA-GGA-------CAACTCTCTCCTAGAGGG-------------GTCAGTCCACCAGTCCCCCTGCCCGTCCCTGTAAGATCCTCAGA-TGCGTTCCGCACAGTTCACAGCAGG----ATTGACTCCAAAT---T-------------------------------------AACGTAGG--------TTTCACTGGA--T----------TTTTTCCCCCTTTC-----GTGTTTTATATTT-------TCTCTTTTCTT---TGTCTTATTTCTAC----CACT--------TCCTCACTCAT----------GTTCT i dasNov3.JH578441 C 0 C 0 a score=36199.000000 s hg38.chr14_KI270725v1_random 124516 3 + 172810 -AAG s panTro5.chr1 126706607 3 + 228573443 -AAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74686826 3 + 162613886 -AAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 107825 3 + 126596 -AAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5694872 3 + 72422247 -AAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147212 3 - 99891981 -AAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52377373 3 + 185818997 -AAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125023118 3 - 192294377 -AAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 370197 3 - 3123512 -AAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7603858 3 - 10077455 -AAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121541607 3 - 127223203 -AAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 673496 3 + 1799296 -AAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5209847 3 - 6934359 -AAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20085779 3 + 128169293 -AAG i calJac3.chr8 C 0 I 321 s saiBol1.JH378145 17667676 3 + 18371965 -aaG i saiBol1.JH378145 I 449 C 0 s cebCap1.NW_016107540v1 2201343 3 - 3566421 -AAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400090 3 + 9267652 -AAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1644911 3 - 14340318 -GAG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107009 3 + 55844845 -AAA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 309032 3 - 1446996 TGA- i dasNov3.JH578441 C 0 C 0 a score=48873.000000 s hg38.chr14_KI270725v1_random 124519 5 + 172810 AATAC s panTro5.chr1 126706610 5 + 228573443 AATAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74686829 5 + 162613886 AATAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 107828 5 + 126596 AATAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5694875 5 + 72422247 AATAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147215 5 - 99891981 AATAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52377376 5 + 185818997 AATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125023121 5 - 192294377 AATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 370200 5 - 3123512 AATAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7603861 5 - 10077455 AATAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121541610 5 - 127223203 AATAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 673499 5 + 1799296 AATAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5209850 5 - 6934359 AATAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20086103 5 + 128169293 AACAC i calJac3.chr8 I 321 C 0 s saiBol1.JH378145 17667679 5 + 18371965 AACAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2201346 5 - 3566421 AACAC i cebCap1.NW_016107540v1 C 0 I 279 s aotNan1.NW_018514471v1 7400093 5 + 9267652 AACAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1644914 5 - 14340318 ATCAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107012 4 + 55844845 -AAAC i canFam3.chr18 C 0 I 27 s dasNov3.JH578441 309035 4 - 1446996 AATT- i dasNov3.JH578441 C 0 C 0 a score=106520.000000 s hg38.chr14_KI270725v1_random 124524 7 + 172810 CCAAACA s panTro5.chr1 126706615 7 + 228573443 CCAAACA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74686834 7 + 162613886 CCAAACA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 107833 7 + 126596 CCAAACA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5694880 7 + 72422247 CCAAATG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147220 7 - 99891981 CCAAACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52377381 7 + 185818997 CCAAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125023126 7 - 192294377 CCAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 370205 7 - 3123512 CCAAGCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7603866 7 - 10077455 CCAAACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121541615 7 - 127223203 CCAAACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 673504 7 + 1799296 CCAAACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5209855 7 - 6934359 CCAAACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20086108 7 + 128169293 CCAAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17667684 7 + 18371965 CCAAACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2201630 7 - 3566421 CCAAACA i cebCap1.NW_016107540v1 I 279 C 0 s aotNan1.NW_018514471v1 7400098 7 + 9267652 CCAAACA i aotNan1.NW_018514471v1 C 0 I 145 s otoGar3.GL873564 1644919 7 - 14340318 CCAAACA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107043 7 + 55844845 CAGAACA i canFam3.chr18 I 27 C 0 s dasNov3.JH578441 309039 7 - 1446996 ACAAGCA i dasNov3.JH578441 C 0 C 0 a score=1296114.000000 s hg38.chr14_KI270725v1_random 124531 168 + 172810 AATACGT-----------------------------------------------------------------------------------------TCATTTATTTTTTTA--GACTCTCAGAACA--GAG--------------------------------------------------------TTGATAGTTGAACTTCTAATC---TATGT---TAATCAGCTTGGATGCAATACTGACAGGAAGATGGT--------------G----AACTCACAATGTC-TAA---------------TTAAGATACA-------ATTTAAA-------------AAATATATTGA----ATCATGTCCAAAGATT-----TAAAAAA s panTro5.chr1 126706622 167 + 228573443 AATACAT-----------------------------------------------------------------------------------------TCATTTATTTTTTTA--GAGTCTCAGAACA--CAG--------------------------------------------------------TTGATAGTTGAACTTGTAATC---TATGA---TAATCAGCTTGGATGCTATACTGACAGGAAGATAGT--------------G----AACTCACAATGTC-TAA---------------TTAAGATAAA-------A-TTAAA-------------AAGTATATTGA----TTCATGTCCAAAGATT-----TAAAAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74686841 167 + 162613886 AATACAT-----------------------------------------------------------------------------------------TCATTTTTTGTTTTA--GAGTCTCAGAACA--CAG--------------------------------------------------------ATGATAGTTGAACTTGTAATC---TATGA---TAATCAGCTTGGATGCTATACTGACAGGAAGATAGT--------------G----AACTCACAATGTC-TAA---------------TTAAGATAAA-------A-TTAAA-------------AAGTATATTGA----TTCATGTCCAAAGATT-----TAAAAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 107840 168 + 126596 AATACAT-----------------------------------------------------------------------------------------TCATTTATTGTTTTA--AACTCTCAGAACA--CAG--------------------------------------------------------TTGATAGTTGAACTTCTAATC---TATGA---TAATCAGCTTGGATGCTATACTGACAAGAAGACGGT--------------G----AACTCACAATGTC-TAA---------------TTAGGATACA-------ATTTAAA-------------AAATATATTGA----ATCATGTCCAAAGACT-----TAAAAAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5694887 167 + 72422247 AATACAT-----------------------------------------------------------------------------------------TCATTTATTTTTTTA--GACTCTCAGAACA--CAG--------------------------------------------------------TTGATAGTTGAACTTGTAATC---TATGA---TAATCAGCTTGGATGCTATACTGACAGGAAGATGGT--------------G----AACTCACAATGTC-taa---------------ttaagataaa-------a-ttaaa-------------aaatatattGA----TTCATGTCCAAAGATT-----TAAAAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147227 170 - 99891981 AATACAT-----------------------------------------------------------------------------------------TCATTTAGTTTTTTA--AACTCTCAGAACA---AG--------------------------------------------------------TTGACAGTTGAACTTGTAGTC---TGTGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAATGTC-TAA---------------TTAAGTTAAG-------A-TAAAATGTT---------AAAAATATTGA----TTCATGTCCAAATATT-----TTAAAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52377388 170 + 185818997 AATATAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTT--AACTCTCAGAACA--CAG--------------------------------------------------------TTGACAGTTGACGTTGTAATT---TATGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAACATC-TAA---------------TTAAGACAAA-------A-TAAAAAAT----------ATATATATTGA----TTCATGTCTAAAGATT-----TAAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125023133 175 - 192294377 AATATAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTT--AACTCTCAGAACA--CAG--------------------------------------------------------TTGACAGTTGACGTTGTAATT---TATGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAACATC-TAATTAAG----------TTAAGACAAA-------A-TAAAAAAT----------ATATATATTGA----TTCATGTCTAAAGATT-----TAAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 370212 175 - 3123512 AATATAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTT--AACTCTCAGAACA--CAG--------------------------------------------------------TTGACAGTTGACGTTGTAATT---TATGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAACATC-TAATTAAG----------TTAAGACAAA-------A-TAAAAAAT----------ATATATATTGA----TTCATGTCTAAAGATT-----TAAAAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7603873 173 - 10077455 AATACAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTT--AACTCTCAGAACA--CAG--------------------------------------------------------TTGACAGTTGACATTGTAATT---TATGA---TAATCAGCTTGGGTGCTATACTGACAGTAAGATGGT--------------G----AACTCACGACATC-TAATTAAG----------TTAAGGCAAA-------A-TAAAAA------------AAAAATATTGA----TTCATGTCCAAAGATT-----TAAAAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121541622 177 - 127223203 AATACAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTTTAAACTCTCAGAACG--CAG--------------------------------------------------------TTGACAGTTGACATTGTAATT---TATGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAATAGC-TAATTAAG----------TTAAGACAAA-------A-TAAAATAT----------ATATATATTGA----TTCACGTCCAAAGATT-----TAAAAAA i chlSab2.chr21 C 0 I 10 s manLeu1.NW_012105809v1 673511 173 + 1799296 AATACAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTT--AACTCTCAGAACA--CAG--------------------------------------------------------TTGACAGTTGACACTGTAATT---TATGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAACATC-TAATTAAG----------TTAAGGCAAA-------A-TAAA--AA----------AAAAATATTGA----TTCATGTCCAAAGATT-----TAAAAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5209862 173 - 6934359 AACACAT-----------------------------------------------------------------------------------------TCATTTCTTTTTTTT--AACTGTCAGAACA--CAG--------------------------------------------------------TTGACAGTTGAAGTTGTAATT---TATGA---TAATCAGCTTGGATGCTATACTGACAGTAAGATGGT--------------G----AACTCACAACATC-TGATTAAG----------TTAAGACAAA-------A-TAAAAA------------AAAAATATTGA----TTCATGTCCAAAGATT-----TAAAAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20086115 167 + 128169293 AATGCCT-----------------------------------------------------------------------------------------TCATGTCATTTTAT---ACTTCCCAGAACA--CAG--------------------------------------------------------TTGTCAGTTGAAGTCGTAATC---TATGA---TAATCAGCTTGGATGCTATACTAACAGTAAGATGGT--------------G----AACTCATGATGTC--AA---------------TTAAGTTAAA-------A-TGAAATA-----------AAAAATACTGA----TTAATGTCCAAATATT-----TAAAAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17667691 167 + 18371965 AATACAT-----------------------------------------------------------------------------------------TCATTTCTTTTTAT---AATTCCCAGGACG--CAT--------------------------------------------------------TTGACACTTAAATTCATAATC---TATGA---TAATCAGCTTGGATGCTACACTAACAGTAAGATGGT--------------G----AATGTACAATGTC--AA---------------TGAAGTTAAA-------A-TGAAATA-----------AATAATATTGA----TCCATGTCCAGATATT-----TAAAAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2201637 167 - 3566421 AATACAT-----------------------------------------------------------------------------------------TCATTTCTTTTTAT---AATTCCCAGAACA--CAG--------------------------------------------------------TTGACAGTTGAAGTCGTAATC---TGTGA---TAATCAGCTTGGATGCTACACTAACAGTAAGATGGT--------------G----AACACACAATGTC--AA---------------TTAAGTTAAA-------A-TAAAATA-----------AAAAATATTGA----TTCATGTCCAGATATT-----TAAAAAA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1644926 156 - 14340318 AATATAT-----------------------------------------------------------------------------------------TCATTT--TTTTGTA--AACTCCCCTGACATGTAG--------------------------------------------------------ATGACAATGGAAGCCATCATC---------------------GTCTCTTCTAATGATAGGAAGATGGT--------------GGATCAACTCACCATGTC-CAA---------------TTA-GTTATT-------A-TGAAATA-----------AATAATATCTA----CTCATGTTCAAGATTT-----TTAAAA- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107050 311 + 55844845 AGTACATAGCACTTGAAACCATAATCTTgggcagccccagtagctcagtagtttagcatcactttcggcctagggcatgatcctggagacccaggatcaagtcccccgtcg--ggctccctgcatg--gagcctgcttctccctcagcctgtgtctctgtgtctctcatgaatacataaataaaatcttaaaaaTAGAAACCATAATT---TTTTACTGTGATGACTTTGGAGGTTCTCATGGCACTATAATTGT--------------G----AA--GACAAGGTC-AAA---------------TTA-GTGatt-------a-taaa--------------aaatatatata----ttcacatttaaagttt-----aaaaaaa i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 309046 220 - 1446996 --------------------------------------------------------------------------------------------------GCTTAAGTTTTT---AACTCCCATGACAATTAT--------------------------------------------------------AGGACTCGCAAGGTTGGAATCTTCTACTA---TAAATTCCTTGGATATTATAATGACAATAAGAGTGTTGAAATTAAGAAAGG----AATTTAAAATGCTGTAAGAGAGTCCACTCTCTTCAAGACAAACCCTTATA-TAAAACCCCCATTTTGGAAGTTCTTCTGAAGAGATCATGCACTAAAACCCACAATGAAAA- i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=21506.000000 s hg38.chr14_KI270725v1_random 124699 7 + 172810 CCTAAGT-- s panTro5.chr1 126706789 7 + 228573443 CCTAAGC-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687008 7 + 162613886 ACTATGC-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108008 7 + 126596 CCTAAGC-- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5695054 7 + 72422247 CCTAAAC-- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147397 7 - 99891981 ACTTAAC-- i nomLeu3.chr17 C 0 I 2 s rheMac8.chr3 52377558 7 + 185818997 CCTAGCC-- i rheMac8.chr3 C 0 I 1 s macFas5.chr3 125023308 7 - 192294377 CCTAGCC-- i macFas5.chr3 C 0 I 1 s macNem1.NW_012011522v1 370387 7 - 3123512 CCTAGCC-- i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 7604046 7 - 10077455 CCTAGCC-- i cerAty1.NW_012000909v1 C 0 I 1 s manLeu1.NW_012105809v1 673684 7 + 1799296 CCTAGCC-- i manLeu1.NW_012105809v1 C 0 I 1 s colAng1.NW_012115910v1 5210035 7 - 6934359 CCTAGCC-- i colAng1.NW_012115910v1 C 0 I 1 s calJac3.chr8 20086282 7 + 128169293 CCTAACC-- i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17667858 7 + 18371965 CGTAACC-- i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2201804 7 - 3566421 TGTAACC-- i cebCap1.NW_016107540v1 C 0 I 1 s otoGar3.GL873564 1645082 7 - 14340318 CCAAATC-- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107361 7 + 55844845 aaCAACT-- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 309266 7 - 1446996 --TATATGT i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I e chlSab2.chr21 121541799 10 - 127223203 I a score=2194090.000000 s hg38.chr14_KI270725v1_random 124706 222 + 172810 -------GGCAGTGTCACAATTTCTTCT-TTTTAGTTTACATGGTTTCTTAAATGCCTACAATTATTTTAAAGGAAGCCTTGAGTCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTCCTTGAAATCCATTAGATGATTGATGATTTTTT-CACATAT-ATTTCTGAACTGAAAAGCTAGTTGGGAATTATTTTTATAAGGAT-ATCCTTATGTAATATT--- s panTro5.chr1 126706796 220 + 228573443 -------AGTAGTGTCACAATTTCTTCT-TTTTAGTTTACGTGGTTTCTTAAAAGCCTACAATTGTTTTAAAGGAAGCCTTGAATCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTCCTTGAAATCCATTAGATGCTTGATGA-TTTTT-CACATAT-ATTTCTGAATTGAAAAGCTAGTTGTGAATTA-TTTTATAAGCAT-ATCCTTATGTAATATT--- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687015 221 + 162613886 -------GGCAGTGTCACAGTTTCTTCT-TTTTAGTTTACATGGTTTTTTAAATGCCTACAATTGCTTTAAAGGAAGACTTGAATCTATGAAAAATTGAGACGTATG----GAAAAATTTACTAATCCATTTCTCCTTGAAATCCATTAGATGCTTGATGA-TTTTT-CACATAT-ATTTCTGAATTGAAAAGCTAGTTGGGAATTATTTTTATAAGCAT-ATCCTTATGTAATATT--- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108015 221 + 126596 -------GGCAGTGTCACAATTTCTTCT-TTTTAGTTTACATGGTTTCTTAAATGCCTACAATTATTTTAAAGGAAGTCTTGAGTCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTTCTTGAAATCCATTAGATGTTTGGTGA-TTTTT-CACATAT-ATTTCTGAGTTGAAAAGCTAGTTGGGAATTACATTTATAAGCCT-ACCGTTATGTAATATT--- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5695061 221 + 72422247 -------GGCAGTGTCACAATTTCTTCT-TTTTAGTTTACATGGTTTCTTAAATGCCTACAATTATTTTAAAGGAAGCCTTGAGTCTAGGAAAAATGGAGACATATG----GAATAAATTACTAACCCATTTCTCCTTGAAATCCATTAGATGCTTGATGA-TTTTT-CACATAC-ATTTCTGAATTGAAAAGCTAGTTGTGAATTATTTTTATAAGCAT-ATCGTTATGTAATATT--- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147406 221 - 99891981 -------GGCAGTGTCACAATTTCTTCT-TTTTAGTTTACATGGTTTCTTAAATGCCTACAATTGTTTTAAAGGAAGCCTTGTGTCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTCCTTGAAATCCATTAGATGCTTGATGA-TTTTT-CATATAT-ATTTCTGAATTGAAAAGCTAGCTGTGAATTATTTTTATAAGCAT-ATCCTTATGTAATATT--- i nomLeu3.chr17 I 2 C 0 s rheMac8.chr3 52377566 210 + 185818997 -------GGCAGTGACAAAATATCTTCT-TTTGAGTCTACATGATTTCTCAAATGCCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTTCTTGAAATCCATTAAAGGCTTGATGA-TT-------------TTTCTGAATTGAAAAACTAGTTGTGAATTATGTTTATAAGCAT-ATCCTTATGTAATATT--- i rheMac8.chr3 I 1 C 0 s macFas5.chr3 125023316 210 - 192294377 -------GGCAGTGACAAAATATCTTCT-TTTGAGTCTACATGATTTCTCAAATGCCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTTCTTGAAATCCATTGAAGGCTTGATGA-TT-------------TTTCTGAATTGAAAAACTAGTTGTGAATTATGTTTATAAGCAT-ATCCTTATGTAATATT--- i macFas5.chr3 I 1 C 0 s macNem1.NW_012011522v1 370395 210 - 3123512 -------GGCAGTGACAAAATATCTTCT-TTTGAGTCTACATGATTTCTCAAATGCCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTTCTTGAAATCCATTAAAGGCTTGATGA-TT-------------TTTCTGAATTGAAAAACTAGTTGTGAATTATGTTTATAAGCAT-ATCCTTATGTAATATT--- i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 7604054 221 - 10077455 -------GGCAGTGACACAATATCTTCT-TTTGAGTCTACATGATTTCTTAAATGCCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATACG----GAATAAATTACTAACCCATTTCTTCTTGAAATCCTTTAGAGGCTTGATGA-TTTTT-CACATAC-ATTTCTGAATTGAAAAACTAGTTGTGAATTATGTTTATAAGCAT-ATCCTTATGTAATATT--- i cerAty1.NW_012000909v1 I 1 C 0 s chlSab2.chr21 121541809 217 - 127223203 -------GGCAGTGACACAATATCTTCT-TTTGAGTCTACATGATTTCTTAAATGCCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATATG----GAATAAATT----ACCCATTTCTTCTTGAAATCCTTTAGAGGCTTGATGA-TTTTT-CACATAC-ATTTCTGAATTGAAAAACTAGTTGTGAATTATGTTTATAAGCAT-ATCCTTATGTAATATT--- i chlSab2.chr21 I 10 C 0 s manLeu1.NW_012105809v1 673692 221 + 1799296 -------GGCAGTGACACAATATCTTCT-TTTGAGTCTACATGATTTCTTAAATGCCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATACG----AAATAAATTACTAACCCATTTCTTCTTGAAATCCTTTAGAGGCTTGATGA-GTTTT-TGCATAC-ATTTCTGAATGGAAAAACTAGTTGTGAATTATGTTTATAAGCGT-ATCCTTAGGTAATATT--- i manLeu1.NW_012105809v1 I 1 C 0 s colAng1.NW_012115910v1 5210043 221 - 6934359 -------GGCAGTGACACAATATCTTCT-TTTGAATCTACGTGATTTCTTAAATGTCTACAATTATTTTAAAGGAAGTCTTGCATCTAGGAAAAATTGAGACATATG----GAATAAATTACTAACCCATTTCTTCTTGAAATCCATTAGAGGCTTGATGA-TTTTT-CACATAC-ATTTCTGAATTGAAAAACTAGTTGTGAATTATGTTTATAAGCAT-ATCCTTATATAACATT--- i colAng1.NW_012115910v1 I 1 C 0 s calJac3.chr8 20086290 217 + 128169293 -------CGCAGTGTCACAATATCTTCT-T-TGAGTTTACATGGTTTCTTAGATGCCTACAATTATTTTAAAGGAGGTCTTGAGTCTAGGAAAAATGGAGAC--GTG----GAATAAATTATTAACCTATTTCTCCTTGAAATCCGTTAGATACTTGGTGA-TTTTT-CACATAC-ATTCCTGAATTGAAAAACTAATCATGAATTAT-TTTATAAACAT-ATCCTTATGTAATATT--- i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17667866 216 + 18371965 -------GACAGTGTCACAATATCTTCT-TCTGGGTTTACCTGGTTTTTTAAATGCCTATAATTATTTTAAAGGAATTTTTGAGTCCAGAAAAAATGGAGACATATA----GAATAAATTATTAACCAATTTCTCCTTGAAATCCGTTAGATACTTGATGA-TTTTT-CACATAC-ATTTCTGAATTGAAAAACT----GTGAATTAT-TTTATAAGCAT-ATCCTTATGCAATATT--- i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 2201812 215 - 3566421 -------GGCAGTGTCACAATATCTTCT-TTTGAGTTTACATGGTTTCTTAAATGCCTACAATTATTTTAAAGGAGGTTTTGAGTCTAGGAAAAATGGAGACATATG----GAATAAATTATTAACCAATTTCTCCTTGAAA-CCATTAGATACCTGATGA-TTTTT-CACATAC-ATTTCTGAATTGAAAAACT----GTGAATTAT-TTTACAAGCAT-ATCCTTATGTAATATT--- i cebCap1.NW_016107540v1 I 1 C 0 s otoGar3.GL873564 1645089 200 - 14340318 ---------AGATGTTGCATTGTATTAT-T-TGTATTGAGTTGTGTTCTCAGATGCCCACAATTATTTTAAAGGACAACTTGCCCCTAGGAAAAATTGCAACA--------GACTAAGTTCTTAACCCAGTTATTTTTGTAACTCATTGGATATTTGAAGC-TTTTTATACATAT-ATCCCTGAAATGAAAAACT----GTGAATTACTTTTATAAGCATCATC------------T--- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107368 215 + 55844845 -------AGTTGT-------TATCCTCT-TTTGAGTTAACATCGGCTCTTGAAT-CTCATGATTATTTTAAGGGAGGCCCTGGTTCCAGGAAAAATTGTGATATGCT----GAATAAGTTATTAACCTATTCATCATTAGAAAATTCTAGATGCTTGAGGA-TTTTTACATATGTAATCTCTGATTTAAAAAAATCATCATGGATTCATTCTATAAATAT-ATTATTATGTAACATT--- i canFam3.chr18 C 0 I 140 s dasNov3.JH578441 309273 194 - 1446996 ATAAATATGCATCCAAGCCAGTCATTGTATTAGAGTTAACGTGGGTTCTTAAATGCCCAGGATTATTTTAA-GGAGGTCTTGCCTCTAGGAAAAATCATGATGTATGTAATGAATAAATTAATAACCCA---------------------------------CTTAT---------ATCCCTAAATCATATAACTCATTGTGGACTCTTTCTACATACTC-A--CTTGGGCAACATTATT i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=88737.000000 s hg38.chr14_KI270725v1_random 124928 9 + 172810 TTGTTTCTA s panTro5.chr1 126707016 9 + 228573443 TTGTTTTTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687236 9 + 162613886 TTGTTTTTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108236 9 + 126596 TTGTTTGTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5695282 9 + 72422247 TTATTTTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147627 9 - 99891981 TTGTTTTTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52377776 9 + 185818997 TTCTTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125023526 9 - 192294377 TTCTTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 370605 9 - 3123512 TTCTTTTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7604275 9 - 10077455 TTCTTTTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542026 9 - 127223203 TTCTTTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 673913 9 + 1799296 TTCTTTTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5210264 9 - 6934359 TTCTTTTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20086507 9 + 128169293 TTATTTTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17668082 9 + 18371965 TTACTTTTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202027 9 - 3566421 TTATTTTTG i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1645289 9 - 14340318 TTATTTATG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107723 9 + 55844845 ttgttccca i canFam3.chr18 I 140 I 116 s dasNov3.JH578441 309467 9 - 1446996 TTACTTATG i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=6060451.000000 s hg38.chr14_KI270725v1_random 124937 557 + 172810 ACAGAGAATTGAATGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAAACCATGTGTATGTTGACACGACATTTTAAAATCTAGATTTTAAAATAGGTCC-CA-TATAATTTTGAGTCAATTAGAATATGTTTGTATCAGTCTGTCTACAGTTTTACACCTGTCAAAAGGT-ACTTGAACTAA---AAGAAGTACCTTGAACAATTTTGAAATTTATTATTCCTCTGAAACTGATTAAAAGAATTATGGTAGAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGAAATTATTCCTTGGAGATCAACCTCTGCCAAGATACTTTATAATGACATTGAGACTTTTTGATTTACAAAACTTGTTATATAAAAAAT-ACTAAGAT--GATGACAGATAATACACAGAC--TAATTAAAATTGT-ACTAGAATTAATTGTCTAAATAAATTACAAGGGTACGTCGTACATCTAAATGTATGTTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGCTTT--TGCTTTAGTTTGTAAAACGTTCTTATTTT s panTro5.chr1 126707025 559 + 228573443 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TACTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGAACATGTGTACGTTGACACGACATTTTAAAATCTAGATTTTAAAATAGGTCC-CA-TATACTTTTGTGTCAATTAGAATATGTTTGGATCAGTCTGTCTACAGTTTTACACCTGTCTAAATGT-ACTTGAACTAC---AACAACTACCTTGAACAGTTTTGAAATTTATGATTCCTCTGAAACTGATTAAAAGAATTATGGTAGAGTGAA--ATTCTGATTGACATAATTTGGGAGAGAAATTATTCCTTGGACATCAACCTCTGCCAAGATAGTTTATAATGACATTGAGGCTTTTTAATTTACACAATTTGTTATATAAAAAAT-ACTAAGAC--GATGGCAGATAATACACAGACTTTAATTAAAATTGT-ACTACAATTAAAAGTCTAAATAAATTAGAAGTGTACATGGTACATCTAAATGTATGTTTTCATATTTTATTTGTGCATTTTTTTCCTAGG-GTTTCTTT--TGCTTTAGTTTGTAAAACGTTCTCATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687245 550 + 162613886 ACAGTGAATTGAAGGTTTAAAGATCAAATCA-----TTCTATCCAGAGAATAAAAAGCAAATAT--------GAGAACATGTGTATGTTGACACGACATTTTAAAGTCTAGATTTTAAAATAGGTCC-CA-TATACTTTTGTGTCAATTAGAATATGTTTGCATCAGTCTGTCTACAGTTTTACACCTGTCTAAATGT-ACTTGAACTAC---AACAACTACCTTGAACAATTTTGAAATTTATGATTCCTCTGAAACTGCTTAAAAGAATTATGGTAGAGTGAA--ATTCTGATTGACATAATTT-GGAGAGAAATTATTCCTTGGAGATCAACCTCTGCCAAGATGGTTTATAATGACACGGAGCCTTTTTGATTTACACAATTTGTTATATAAAAAAT-GCTGAGAC--AATGACAGATAATACACAGAATTTAATTAAAATTGT-ACTGCAATTAAAATTCTAAATAAATTAGAAGTGTACATGGTACATCTAAATGTATGTTTATATATTTTACTTGTGCATTTTTTTCCTAGG-GTTTCTTT--TGCTTTAGTTTGTAAAACGTTCTTATTTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108245 559 + 126596 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGAACATGTGTATGTTGACAAGACATTTTAAAATCTAGATTTTAAAATAGGTCC-CA-CATAATTTTGAGTCAATTAGAATATGTTTGTATCAGTCTGTCTACAGTTTTACACCTGTCAAAAGGT-ACTTGAACTAA---AAGAAGTACCTTGAACAATTTTGAAATTTATTGTTCCTCTGAAACTGATTAAAAGAATTATGGTAGAGTGAA--ATTCTGATTGGTATAATTTGGGAGAGAAATTATTCCTTGGAGATCAACCTCTGCCAAGACAGTTTATAATGACATTGAGACTTTTTGATTTACACAATTTGTTATATAAAAAAT-ACTAAGAT--GATGACAGATAATACACAGGCTTTAATTAAAATTGT-ACTAAAATTAAAGGTCTAAATATATTACAAGGGTACGTGGTACATCTAATTGCATGTTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGCTTT--TGCTTTAGTTTGTAAAACGTTCTTATTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5695291 559 + 72422247 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGTATAAAAAGCAATTATTTCACAAGGAGAACACGTGTATATTGACACGACATTTTAAAATCTAGATTTTAAAATAGGTCC-CA-TATACTTTTGAGTCAATTAGAATATGTTTGTATCAGTCTGTCTACAGTTTTACACCTGTCAAAATGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTTTGAAATTTATTATTCCTCTGAAACTGATTAAAAGAATCATGGTAGAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGAAATTATTCCTTGGAGATCAACCTCTGCCAAGATAGTTTATAATGACATTGAGACTTTTTGATTTACAAAATTTGTTACATAAAAAAT-ACTAAGAC--GATGACAGATAATACACAGACTTTAATTAAAATTGT-ACTAAAATTAAATGTCTAAATAAATTAGAAGGGTATGTGGTACATCTAACTGTACGTTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGCTTT--TGCTTTAGTTTGTAAAACGTTCTTATTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44147636 556 - 99891981 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGAACATGTATATGTTGACAGGACATTTTAAAATCTAGATTTTAAAATAGGTCC-CA-TATATTTTTAAGTCAATTAGAATATGTTTGTATCAGACTGTCTACAGTTTTAAACCTGTCAAAATGT-ACTTGAACTAC------AAGTACCTTGAACAATTTTGAAATGTATTATTCCTCTGAAACTGATTAAAAGAATTATGATATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCCTTGGAGATCATCCCCTGCCAACATAGTTTATAATGACATTGAGACTTTTTAATTTATAAAATTTGTTATATAAAAAAT-ACTAAGAC--GATGACAGATAACGCACAGACTTTAATTAAAATTGT-ACTAAAATTAAATGTCTAAATAAATTAGAAGGGTACGTGGTACATCTAATTGTATGTTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAAACGTTCTTATTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52377785 553 + 185818997 ACAGTGAA-TGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGACCTTTTAAAATCTAGATTTTAAAATAGATCA-TA-TATATTTTTGAGTCAATTAGAATATGTTTGTATCAATCTGTCTACAGTTTTACACCTGTAAAAATGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTTTGAAATTTATTATTCATCTGAAACTGATTAAAAGAATTATGGTATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCCTTGGAGATCAACACCTGCCAAGATAATTTATAATGACATGGAGACTTTTTGATTTACAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATACACAGACT----TTAAAATTGT-ACTAAAATTAAATGTCTAAATAAATTAGAAGGGTATGTGGTACATCTAATTGTATATTTGTATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAGACGTTCTTATTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125023535 554 - 192294377 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGACCTTTTAAAATCTAGATTTTAAAATAGATCA-TA-TATATTTTTGAGTCAATTAGAATATGTTTGTATCAATCTGTCTACAGTTTTACACCTGTAAAAATGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTTTGAAATTTATTATTCATCTGAAACTGATTAAAAGAATTATGGTATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCCTTGGAGATCAACACCTGCCAAGATAATTTATAATGACATGGAGACTTTTTGATTTACAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATACACAGACT----TTAAAATTGT-ACTAAAATTAAATGTCTAAATAGATTAGAAGGGTATGTGGTACATCTAATTGTATATTTGTATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAGACGTTCTTATTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 370614 554 - 3123512 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGACCTTTTAAAATCTAGATTTTAAAATAGATCA-TA-TATATTTTTGAGTCAATTAGGATATGTTTGTATCAATCTGTCTACAGTTTTACACCTGTAAAAATGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTTTGAAATTTATTATTCATCTGAAACTGATTAAAAGAATTATGGTATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCCTTGGAGATCAACACCTGCCAAGATAATTTATAATGACATGGAGACTTTTTGATTTACAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATACACAGACT----TTAAAATTGT-ACTAAAATTAAATGTCTAAATAAATTAGAAGGGTATGTGGTACATCTAATTGTATATTTGTATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAGACGTTCTTATTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7604284 532 - 10077455 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGACCTTTT-AAATCTAGATTTTAAAATAGATCC-TA-TGTATTTTTGAGTCAATTAGAATATGTTTGTATCAATCTGTCTACAGTTTTACACCTGTAAAACTGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTTTGAAATTTATTATTCATCTGAAACTGATTAAAATAATTATGGTATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCGTT-------------------GATAATTTATAATGACATTGAGACTTTTTGATTTACAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATACACAGACT----TTAAAATTGT-ACTAAAATTAAATGTCTAAATAAATTAGAAGGG--TGGGGTACATCTAATTGTATATTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAGACATTCTTATTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542035 545 - 127223203 ACAGTGAATTGAAGGTTTAAAG-----ATTA-----TTCTATCCAGAGAATAAAAAGCCATTATTTCACAAGGAGCACATGTATATGTTGACATGACCTTTTAAAATCTAGATTTTAAAATAGATCC-TA-TATATTTTTGAGTCAATTAGAATATGTTTGTATCAATCTGTCTACAGTTTTACACCTGTGAAAATGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTCTGAAATTTATTATTCATCTGAAACTGATTAAAAGAATTATGGTATAGTGAA--ATTCTGATTGGCACAATTTGGGAGAGGAATTATTCCTTGGAAATCAACCCCTGCCAAGATAATTTATAATGACATTGAGACTTTTTGATTTACAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATACACAGACT----TTAAAATTGT-ACTAAAATTAAATGTCTAAATAAATTAGAAGGG----TGGTACATCTAATTGTATATTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAGACGGTCTTATTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 673922 549 + 1799296 ACAGTGAATTGAAGGTTTAAAGATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGACCTTTTAAAATCTAGATTTTAAAATAGATCC-TA-TATATTTTTGAGTCAATTAGAATATGTTTGTATCAATCTGTCTACAGTTTTACACCGGTAAAAATGT-ACTTGAACTAC---AACAAGTACCTTGAACAATTTTGCAATTTATTATTCATCTGAAATGGATTAAAAGAATTATGATATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCCTTGGAGATCAACCCCTGCCAAGATAATTTATAATGACATTGAGACTTTTTGATTTATAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATATACAGACT----TTAAAATTGT-ACTAAAATTAAATG-CTAAATAAATTAGAAGGG----TGGTACATCTAATTGTATATTTATATATTTTATTTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTTAGTTTGTAAGACGTTCTTATTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5210273 555 - 6934359 ACAGTGAATTGAAGGTTTAAAAATTAAATTA-----TTCTATCCAGAGAATAAAAAGCAATTATTTCACTAGGAGCACATGTATATGTTGACATGACCTTTTAAAATCTAGATTTTAAAATAGATCT-TATTTTTTTTTTGAGTGAATTAGAATACGTTTGCATAAATCTGTCTACAGTTTTACACTTGTAAAACTGT-ACTTGAACTAC---AACAAGTACCGTGAACAATTTTGAAATTTATTATTCATCTGAAACTGATTAAAAGAATTATGGTATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGGAATTATTCCTTGGAGATCAACCCTTGCCAAGATAATTTATAATGACATTGAGACATTTTGATTTACAAAATTTGTTATAT-AAAAAT-ACTAAGAA--GATGATAGATAATACACAGGCT----TTAAAATTGT-ACCAAAATTAAATGTCAAAATAAATTAGAAGGGTACGTGGTTCATCTAATTGTATATTTATATATTTTATCTGTGCATTTTATTCCTAGG-GTTGTTTT--TGCTTCAGTTTGTAAGATGTTCTTATTTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20086516 548 + 128169293 TCAGCGAATTAAAGGTTTAAAAATCAAATTA-----TTATATACAGAGAATAAAAAGCAATTATGTCACAAGGAGCACCTGTATATGTTGACATGGC--------ATGTAGATCTTTAAATAGATCC-CA-TATATTTTTGGGTCAATTTCAATATGTTTCTATCAGTCTGTCTACAGTTTTACACCTGTCAAAATGT-ACTTGAACTAT--AAACAAGTAACTTGAACAATTTTGAAATTTATTATTCCTTTGAAACTGATTGAAAGAATTATGTTATAGTGAA--ATTCTGATTGGCCTAATTTGGGAGAGAGATTATTCCTTAGAGGTCAACCCCTGCCAAGATAGTTTATAATGACATTGAGACTTTTTGatttat--aattttttatataaaaatt-aCTAAGAAG-GATAATAGATAATACACAGACTTTACTTAAAATTGT-TCTAAAATTAAATGTCTAAATAAATTAGAAGGGTACGTGGTACACCTAATTGTATGTTTGTATATTTTATTTGT--GTTTTATTCCTAGG--TGTTTTT--TGCTTTGGTGTTTAAAACGTTCTTACTTt i calJac3.chr8 C 0 I 553 s saiBol1.JH378145 17668091 550 + 18371965 ACAATGAATTGAAGATTTAAAGATTAAATTA-----TTCTAT--AAACAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGAC--------ATGTCGATTTTTAAATAGATCC-CA-TATGTTTTTGAGTCAATTTCAACATATTTGTACCAGTCTGTCTACAGTTTTACACCTGTCAAAATGT-ACTTGAACTAT--CAACAAGTACCTTGAACAATTTTGAAATTTATGATTTCTCTGAAACTGATTGAAAGACTTATGGTGTAGTGAA--ATTCTGATTGGCATAAGTTGAGAGAGAAATCATTCCTTGGAGATAAACACCTGCCAAGATAGTTTATAATGACATTGAGACTTTTAGATTTACAAAATCTGTTATATAAAAATT-ACTAAGAAA-GATAATCGATAATACCTCTATTTTACTTAAAATTGT-CCTAAAATTAAATGTATAAATAAATTACAAGGGTATGTGGTACACCTAATTGTATATTTGTATATTTTAGTTGT--ATTTTATTCCTAGATTTTTTTTT--TGCTTTGGTTTTTAAAACGTTCTTACTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202036 547 - 3566421 ACAGTGAATTGAAGGTTTAAACATTAAATTA-----TTCTATAAAGAGAATAAAAAGCAATTATTTCACAAGGAGCACATGTATATGTTGACATGAC--------ATGTAGATTTTTAAATAGATCC-CA-TATATTTTTGACTCAATTTCAACACATTTGTATCAGTCTGTCTACAGTTTTACACCTGTCAAAATGT-ACTTGAACTAT--AAACAATTACCTTGAACAATTTTGAAATTTATTATTTCTCTGAAACTGATTGAAAGACTTATGGTATAGTGAA--ATTCTGATTGGCATAATTTGGGAGAGAAATTATTCCTTGGAGATAAACCCCTGCCAAGATAGTTTATAATGACATTGAGACTTTTTGATTTACAAAATTTGTTGTATAAAAAAC-ACTAA-----GATAATAGGTAATACACATACTTTACTTAAAATTGT-TCTAAAATTAAATGTCTAAATAAATTAGAAGGGTACGTGGTACACCTAATTATATATTTGTATATTTTATTTGT--ATTTTATTCCTAGG-TGTTTTTT--TGCTTTGGTTTTTAAAACATTCTTACTTT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1645298 542 - 14340318 ACAGAGAATGGAAGGTTTGAAGATTAAATTA-----TTC-----AGAGAATAAAAAGCAATCATTTCACAAGGAACAAATGTGCGTGTTGACAAGATAT------ATGTAGACTTTTAA--AAATGC-CA-TATAGTTTTGAACCAATTAAAGTAAGCTTT--TTAGTCTGTCTACATTTTTACACCTGTCAAAATGT-GCTTTAACTAA--AAATGGGTACCTTAAAGAATTTTGAAATTTATTATTCCTCTTAGACTGATAGCAAGCACTATAGTATAATGAAATATTCTGATTGGCATAATTTGGGACAGGAATAATTCCTCAGAGATCAACTCCAGCCAAGATAATTTATAATGATACAGAAACAAGTTAATCTACAAAATTGATAACAT-AAAAAA-ACTAAGATT-GAATGTAGATA-------TATTTTAATTAGAAAGGT-TCTAAAGGTAGGTATCTATATAAATCAGATAGAGATGGTGTACATCTAATTGTATATTTGTACATTTTATTTGTGCATTTTTTTCTTAGG-TGTGCTTTTCTGCTTTAATTTGTGGAAAGtttttatttg i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4107848 545 + 55844845 AAAGAGAACTGAAGG-TGGAAGATTAACCTAACTTCTTCTATTTAAAGAATAAAAAGCAATTATTTCACAAGCAAAAGAGGTATAGGTTGACAAGGT--------ATGTAGATATTTTTAAAGTTCCATA-TATATTTTTGAGTCAATTAAAATGTTTTTTAA--AGTCTGTCTGCAGTTTTATAACTGTC-AAATGT-GCTTGAACTAG--AAATAAGTGCCTTAAACAATTTTGAAATTTATTATTCCCCTGACACTGATTGAAAGAATTATGGGATGGTGAAATATTCTGAATGACACAGTTTAGGACAGGAATAATTCCCCAGAGTTCAAGCCCTGCCAAGATAGTTTACAGTGACATAGAAACTTTTGAATATAAAACATTTTTGAGAAAAAGAGC-ATTAAGA---ATTAATAGATAAAATATT--TTTTAACTAAAAATGTAACTAAACATAGGTGTCTAAAAAAATTGAATAGGAATGTTGTGCCT---------TAATTGTGTATTTTATTGATGCATTTTAAGTCTAGG-TGATTTTT--TTCTTTTGTTTATGAAAGTATGTTGCTTT i canFam3.chr18 I 116 I 1 s dasNov3.JH578441 309476 539 - 1446996 ATAAAGAATTGAAGGTTGAAAGATTAAAATA-----ATTTATTCAGGGATCAGAATACAATTATTTCACAAGGGACAAATACATATGCTGACAAAGTATATACCAGTT---ATTTTAA------CTC-CA-GATATTTTT-TGTTAATTAAAACACATTTTTTTAAGTCTGTCCACATGTTCACACTTACCAAAATGTGGATTAAACTAAAGAAGAGATTATATTAAATAATTTTGAAATTCATTATTCGTC--AGAGTGTTGGAAAGAATTATAGTATGATAAAATATTCTGATCGCCATTGTTTGGGAAAGGAATAATTCTTTAGAGATTGACCTTTGCCAAGATAGTTTACAATGACATAGAGAAGTTCCAATGCACAAAATTTATGAAATAAAGGATCACTAAGAAATAATGATAGATAATATCTATTTT-TAGTTACAAATGT-ACAAAAA--AGATGTTTA-----ACTGGAACATTATGTTCTATAGCTCATCATATATTTGTACATT----CGGTGCATTATATTCCTAGT-----TTTT--TGCCTTAGTTTACAAAATCTTATTATTT- i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=255813.000000 s hg38.chr14_KI270725v1_random 125494 26 + 172810 TATGATA-ATGTAGTATATACTAAATA s panTro5.chr1 126707584 26 + 228573443 TATGATA-ATGTAGCATATACTAAATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687795 26 + 162613886 TATGATA-ATGTAGCATATACTAAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108804 26 + 126596 TATGACA-AGGTAGTATATACTAAATA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5695850 26 + 72422247 TATGATA-AGGTAGTATATACTAAATA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148192 26 - 99891981 TATGATA-ATGTATTATATACTAAATA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378338 26 + 185818997 TATGATA-ATGTATTATATACAAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024089 26 - 192294377 TATGATA-ATGTATTATATACAAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371168 26 - 3123512 TATGATA-ATGTATTATATACAAAATA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7604816 26 - 10077455 TATGATA-ATGTATTATATGCAAAATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542580 26 - 127223203 TATGATA-ATGTATTATATGCAAAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674471 26 + 1799296 TATGATA-ATGTATTATatacaaaata i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5210828 26 - 6934359 TATGATA-ATGTATTATATACAAAATA i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 17668641 26 + 18371965 TATAATA-ACTTATTATATACTAAACA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202583 26 - 3566421 TATAATA-ATGTATTATATACTAAACA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1645840 26 - 14340318 tatatta-attaattacatattaaata i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4108394 27 + 55844845 TATAATAGATGTATTATATGCCAAATA i canFam3.chr18 I 1 C 0 s dasNov3.JH578441 310015 27 - 1446996 TATGATAAAAATAGGATATGTTAAAGA i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I e calJac3.chr8 20087064 553 + 128169293 I a score=1754401.000000 s hg38.chr14_KI270725v1_random 125520 165 + 172810 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAAAAATCGTGCAATCTCTAAGTACATGAACGATGTATTATTTGTACAGCAT-GTACAATGTTTATGCTTCACAGGGTGAGGTAGAGACTGT-AAAACATTGAACCTGGGA s panTro5.chr1 126707610 166 + 228573443 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACTTTAGCTATTGTCAACCAA------ATAAAAATTGTGTAATCTCTAAGCACATGAACTATGTAATATTTGTACAGCATAGTACAATGTTTATGCTTCACAGGGTGAGGTAGAGACTGC-AAAACCTTGAACTTGGGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687821 166 + 162613886 AAGAAAAATCAGGAAATAGAGAATGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAAAAATTGTGCAATCTCTAAGCACATGAACTATGAAATATTTGTACAGCATAGTACAATGTTTATGCTTCACAGGGTGAGGTAGAGACTGC-AAAACCTTGAACTTGGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108830 165 + 126596 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGCTATCATCAACCAA------ATAAAAATTGTGCAATCTGTAAGTACATGAACGATGTATTATTTGTACAGCAT-GTACAATGTTCATGCTTCACAGGGTGAGGTAGAGATTGC-AAAATATTGAACCTGGGA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5695876 162 + 72422247 AAGAAAAATCAGGAAATAGAAAAT---GAAG-AAAACATTAGCTATTGTCAACCAA------ATAAAAATTGTGCAATCTCTAAGCACATGAACTATGTATTATTTGTACAGCAT-GTACAATGTTTATGCTTCACAGGGTGAGGTACAGACTGC-AATATATTGAACCTGGGA i ponAbe2.chrUn C 0 M 171 s nomLeu3.chr17 44148218 165 - 99891981 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAAAAATTGTGCAATCTCTAAGCACATGAACTATGTATTATTTGTACAGCAT-GTACAATGTTTATGCTTCACAGGGTGAGGTAGAGACTGC-AAAATATTTAGCCTGGGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378364 165 + 185818997 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAGAAATTGCACAGTCTCTAAGCACATGAACTTTGTATTATTTGTACAGTAT-GTACAATATTTATGCTTCACAGGGTAAGGTAGAGACTGC-AAAACATTTAACCTGGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024115 165 - 192294377 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAGAAATTGCACAGTCTCTAAGCACATGAACTTTGTATTATTTGTACAGTAT-GTACAATATTTATGCTTCACAGGGTAAGGTAGAGACTGC-AAAACATTTAACCTGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371194 165 - 3123512 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAGAAATTGCACAGTCTCTAAGCACATGAACTTTGTATTATTTGTACAGTAT-GTACAATATTTATGCTTCACAAGGTAAGGTAGAGACTGC-AAAACATTTAACCTGGGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7604842 165 - 10077455 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAGCATTAGCTATTGTCAACCAA------ATAGAAATTGCACAGTCTCTAAGCACATGAACTATGTATTATTTGTACAGTAT-GTACAATATTTATGTTTCACAGGGTAAGGTAGAGACTGC-AAAACATTTAATCTGGGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542606 165 - 127223203 AAGAAAAATCAGGAAATAGAAAATGAAGAAG-AAAACATTAGTTATTGTCAACCAA------ATAGAAATTGCACAGTCTCCAAGCACATGAACTCTGTATTATCTGTACAGTAT-GTACAATATTTATGCTTCACAGGGTAAGGTAGGGACTGC-AAAACAGTTAACCTGGGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674497 165 + 1799296 aagaaaaatcaggaaatagaaattgaagaag-aaaACATTAGCTATTGTCAACCAA------ATAGAAATTGCACAGTCTCTAAGCACATGAACTCTGTATTATTTGTACAGTAT-GTACCATATTTATGCTTCACAGGGTAAGGTAGAGACTGC-AAAACATTTAACCTGGGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5210854 165 - 6934359 AAGAAAAATCAGGAAATAGAAAACGAAGAAG-AAAACATTAGCTATTGTCAACCAA------ATAGAAATTGCACAGTCTCTAAGCACATGAACTCTGTATTATGTGTACAGTAT-GTACAATATTTATGCTTCACAGGGTGAGGTAGAGACTGC-AAAACATTTAACCTGGGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20087617 161 + 128169293 AAGAAAAATCAGAAAATAAAACATAAAGAAGAAAAACATTAGCTATTGCCAACCAA------ATAAAAACTGCACAATCTCTAAACCCATGAACTATGTATTATTTGTACAGCAT-ATACAATGTTCATGCTTCCATGGGTGAGGCAGAGACTGCAAAAACATTTAAC------ i calJac3.chr8 I 553 C 0 s saiBol1.JH378145 17668667 161 + 18371965 AAGAAAAATCAGAAAATAAAACATGAAGAAGAAAAACATTAGCGATTATCAACCAA------ATAAAAATTGCACAGTCTCTAAATCCATGAACTATGTATTATTGGTACAGCAT-ATACAATGTTTATGATTTGCAAGGCGAGGCACAGACTGCAAAAACATTTAAC------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202609 157 - 3566421 AAGAAAAATCAGAAAATAAAAAATGAAGAAGAAAAACATT----ATTTTCAACCAA------ATAAAAATTGCACAGTCTCTAACCCCATGAACTATGTATTATTTGTAGAGCAT-ATACAATGTTTATGCTTCGCAGGGTGAGGCAGAGACTGCAAAAACATTTAGC------ i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1645866 156 - 14340318 aaGGAAAGTCAGAACATAGAAAACAAAGAAT-AACAC-------AGTCCAGAAGAG------ACAATAATTGTGAGATCAGTGAACACATGAGT--TGTCTTATTTGCACAGCAA-ATCCAGTGTTTATAACTCACAATGTGAGAAAGAGGCCAC-AAGGAAATTAAACTGGGA i otoGar3.GL873564 C 0 I 1 s canFam3.chr18 4108421 164 + 55844845 AAGAGAAATTAGAATATAGAAAATGAAGAAGAAAAATATTAGCTACTGTCAACCAACCAAAGACAATAATTGCATGATCTATGAGCACATAAATTCTGT----CTTCCACAGCAT-ATCCAATGTTTATGCTTAGCAGGATGAG----AGGCTGC-AAAAAATTAAATTCTAGC i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 310042 162 - 1446996 AATGAAAATTAG--AATAGAAAATGAAGA---AAAGCATTATC---TGTCAAACAAGAAAAGACAATAATTGCATGATTTAAGAGCATATAAACTACATCTTGTTTACAGAGCAT-AACCAATGTTTATGCTTCACAGAGTGAG--AAATACTGC-AAGGAAACTAAACTGGGG i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=431343.000000 s hg38.chr14_KI270725v1_random 125685 55 + 172810 AAAATAAG-AAAGTAAGGACATTTTCACAACATATTAATATTATAGAAAATGTTGA- s panTro5.chr1 126707776 55 + 228573443 CATATAAG-AAAGTAAGGAAATTTTCACAACTTATTAATATTATAGAAAATGCTGA- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74687987 55 + 162613886 CAAATAAG-AAAGTAAGAAAATTTTCACAACTTATTAATATTATAGAAAATGCTGA- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 108995 55 + 126596 CAAATAAG-AAAGTAAGGAAATTTTCACAATATATTAATATTACAGAAAATGTTGA- i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44148383 55 - 99891981 CAAATAAG-AAAGTAAGGACATTTTCACAATATATTAATATTATAGAAAATGTTGA- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378529 55 + 185818997 CAAATAAG-AAAGTAAGGAAATTTTCACAATATATTAATATTATAGACAATGTTGA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024280 55 - 192294377 CAAATAAG-AAAGTAAGGAAATTTTCACAATATATTAATATTATAGAAAATGTTGA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371359 55 - 3123512 CAAATAAG-AAAGTAAGGAAATTTTCACAATATATTAATATTATAGAAAATGTTGA- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605007 55 - 10077455 CAAATAAG-AAAGTAAGGAAATTTTCAAAATATATTAATATTATAGAAAATGTTGA- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542771 55 - 127223203 CAAATAAG-AGAGTAAGGAAATTTTCACAATATATTAAAATTATAGAAAATATTGA- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674662 55 + 1799296 CAAATAAG-AAAGTAAGGAAATTTTCACAATATATTAAAATTATAGAAAATGTTGA- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211019 55 - 6934359 CAAATAAG-AAAGTAAGGAAATTTTCACAATACATTAATATTATAGAAAATGTTGA- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20087778 35 + 128169293 ---------------------GTTTCACAATGTATTAGAATTATAGAAAATGTTAA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17668828 35 + 18371965 ---------------------TTTTCACAATGTATTAGTATAATAGAAAATGTTAA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202766 35 - 3566421 ---------------------GTTTCACAATGTATTAGTATTATAGAAAATGTTAA- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646023 55 - 14340318 AAGAAAGC-AAAATAAGAAAAATTGTGCAGTACATTAGTATTACAGAAAATTTAGG- i otoGar3.GL873564 I 1 I 1 s canFam3.chr18 4108585 46 + 55844845 ---------AACACTAGAAAATTTT-GTGAAATATTAGTATTATAGAAAATTCTGG- i canFam3.chr18 C 0 I 1 s dasNov3.JH578441 310204 56 - 1446996 CAAAGAAGTAAAGTGAGGAAACTTT-GCAACAAATGAATATTATAGAAGATTTTAGA i dasNov3.JH578441 C 0 C 0 e ponAbe2.chrUn 5696038 171 + 72422247 M e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=92974.000000 s hg38.chr14_KI270725v1_random 125740 11 + 172810 ACTTAACAGTT s panTro5.chr1 126707831 11 + 228573443 ACTTAACAGTT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688042 11 + 162613886 ACTTAACAGTT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109050 11 + 126596 ACTTAACAGTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696215 11 + 72422247 ACTTAACAGTT i ponAbe2.chrUn M 171 C 0 s nomLeu3.chr17 44148438 11 - 99891981 ACTTAACAGGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378584 11 + 185818997 ACTTAACAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024335 11 - 192294377 ACTTAACAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371414 11 - 3123512 ACTTAACAATT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605062 11 - 10077455 ACTTAATAATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542826 11 - 127223203 ACTTAATAATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674717 11 + 1799296 ACTTAATAATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211074 11 - 6934359 ACTTAACAATT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20087813 11 + 128169293 ACTTAACAGTT i calJac3.chr8 C 0 I 319 s saiBol1.JH378145 17668863 11 + 18371965 ACTTAAGAGTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202801 11 - 3566421 ACTTAACAGTT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646079 8 - 14340318 ACTTAGAT--- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 4108632 4 + 55844845 -------AGTT i canFam3.chr18 I 1 I 7 s dasNov3.JH578441 310260 8 - 1446996 ACTTGGAT--- i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=439482.000000 s hg38.chr14_KI270725v1_random 125751 42 + 172810 AAGATACAAGTAGTGAAAAATGAT----AG----TATTTAAGGAGA-TCTA s panTro5.chr1 126707842 41 + 228573443 AAGATACAAGTAGTG-AAAATGAT----AG----TATTTAAGGAGA-TCTA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688053 42 + 162613886 AAGATACAAGTAGTGAAAAATGAT----TG----TATTTAAGGAGA-TCTA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109061 42 + 126596 AAGATACAAGTAGTGAAAAATGAT----AG----TATTTAAGGAGA-TCTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696226 43 + 72422247 AAGATACAAGTAGTGAAAAATGAT----AG----TATTTAAGGAGATTCTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148449 42 - 99891981 AAGATAAAAGTGGTGAAAAATCAT----AG----TATTTAAGGAGG-TCTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378595 42 + 185818997 AAGACAAAAGTAGTGAAAAATGAT----AA----TATTTAAGGAGA-TCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024346 42 - 192294377 AAGATAAAAGTAGTGAAAAATGAT----AA----TATTTAAGGAGA-TCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371425 42 - 3123512 AAGATAAAAGTAGTGAAAAATGAT----AA----TATTTAAGGAGA-TCTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605073 42 - 10077455 AAGATAAAAGTAGTGAAAAATGAT----AG----TATTTAAGGAGA-TCTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542837 42 - 127223203 AAGATAAAAGTAGTGGAAAATGAT----AG----TATTTAAGGAGA-TCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674728 42 + 1799296 AAGATAAAAGTAGTGAAAAATGAT----AG----TATTTAAGGAGA-TCTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211085 42 - 6934359 AAGATAAAAGTAGTGAAAAATGAT----AG----TATTTAAGGAGA-TCTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088143 39 + 128169293 aaGATGAAAGCAATAAGAA---AT----AT----TATTTAAGGGGC-TCTA i calJac3.chr8 I 319 C 0 s saiBol1.JH378145 17668874 39 + 18371965 AAGATAAAAGCAGTAAGAA---AT----AT----TATTTAAGGAGA-TCTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202812 39 - 3566421 AAGATAAAAGCAGTAAGAA---AT----AT----TATTTAAGGAGA-TCTA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646087 45 - 14340318 AAGATA-AAGCAGTGAGAAATGGTAGAGAG----TTTTTAAGGAGA-CCTG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4108643 46 + 55844845 AAAATCAAAACAGTGAGAAATGAT----AGATATTATTTAAAAAGA-TGTA i canFam3.chr18 I 7 I 888 s dasNov3.JH578441 310268 43 - 1446996 AAGATA-AAGCATTGAGGAATGAC----AG--CTTATTTAACGATG-TTGA i dasNov3.JH578441 C 0 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=1960504.000000 s hg38.chr14_KI270725v1_random 125793 188 + 172810 GAAAATTTAATCTATATCAGTAATGTGTGAGAAGTATTAGAATAATGCTTGTATTTCTGG-A-TTGGCAT---CGATTTCTATTGAGACTGGAAATGTAACAGAAGTGAGCA-AAAAAGAATTTAAATTGTGGAT-ACTTGAGTTTTATACCTAGGAGTTCGAGAAATACATTTTGTTAC------TATCAAAGCAGTTGG-- s panTro5.chr1 126707883 188 + 228573443 GAAAATTTAATCTATACCTGTAATGTGTGAGAAGTATTAGAATAATGCTTGTATTTCTGG-A-TTGGCAT---CGATTTCTATTGAGACTGGAAACATAATAGAAGTGAGCA-AAAAGGAATTTAAATTGTGGAT-ACTTGAGTTTTATACCTAGGAGTTCGAGAAATACATTTTGTTAC------TATCAAAGCAGTTGG-- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688095 188 + 162613886 GAAAATTTAATCTATTCCTGTAATGTGTGAGAAGTATTAGTATAATGCTTGTATTTCTGG-A-TTGGCAT---CGATTTCTATTGAGACTGGAAACATAATAGAAGTGAGCA-AAAAAGAATTTAAATTGTGGAT-ACTTGAGTTTTATACCTAGGAGTTCGAGAAATACATTTTGTTAC------TATCAAAGCAGTTGG-- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109103 188 + 126596 GAAAATTTAATCTATATCAGTAATGTGTGAGAAGTATTAGAATAATGCTTGTATTTCTGG-A-TTGGCAT---CGATTTCTATTGAGACTGGAAACATGATAGAAGTGAGCA-AAAAAGAATTTAAATTGTGGAC-ACTTGAGTTTTATACCTAGGAGTTTGAGAAATACATTTTGTTAC------TATCAAAGCAGTTGG-- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696269 188 + 72422247 GAAAATTTAATCTATATCTGTAATGTGTGAGAAGTATTAGAATAATGCTTGTATTTCTGG-A-TTGGCAT---CGATTTCTATTGAGACTGGAAACATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ACTTGAGTTTTATACCTAGGAGTTCGACAAATACATTTTGTTAC------TATCAAAGCAGTTGG-- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148491 188 - 99891981 GAAAGTTTAATTTATATCTGTAATGCATGAGAAGCATTAGAATAATGCTTGTATTTCTGG-A-TTGGCAT---TGATTTCCATTGAGACTGGAAAGATAATAAAAGTGATGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTCGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGG-- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378637 188 + 185818997 GAAATATTAATCTATATCTGTAATGTGTGAGAAGCATTAGAATAATGCTTGTACTTCTGG-A-TAGGCAT---TGATTTCTATTGAGACTGGAAGCATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTTGAGAAATATACTTTGTTAC------TATCAAAGCAGTTGA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024388 188 - 192294377 GAAATATTAATCTATATCTGTAATGTGTGAGAAGCATTAGAATAATGCTTGTACTTCTGG-A-TAGGCAT---TGATTTCTATTGAGACTGGAAGCATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTTGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371467 188 - 3123512 GAAATATTAATCTATATCTGTAATGTGTGAGAAGCATTAGAATAATGCTTGTATTTCTGG-A-TAGGCAT---TGATTTCTATTGAGACTGGAAGCATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTTGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGA-- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605115 184 - 10077455 GAAATATT----TATATCTGTAATGTGTGAGAAGCATTAGAATAATGCTTGTATTTCTGG-A-TAGGCAT---TGATTTCTATTGAGACTGGAAGCATAATAGAAGTGAGGG-AAAAAGAATATAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTTGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGA-- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121542879 188 - 127223203 GAAATATTAATCTATATCTGTAATGTGTGAGAAGCATTACAATAATGCTTGTATTTCTGA-A-TTGGCAT---TGATTTCTATTGAGACTGGAAACATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTTGAGAAATATATTTTGTTAC------TATCAAAGAAGTTGA-- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674770 188 + 1799296 GAAATATTAATCTATATCTGTAATGTGTGAGAAGCATTAGAATAATGCTTGTATTTCTGG-A-TTGGCAT---TGATTTCTATTGACACTGTAAACATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTCGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGA-- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211127 184 - 6934359 GAAATATTAATCTATATCTGTAATGTGTGAGAAGCATTAGAATAA----TGTATTTCTGA-A-TTGGCAT---TGATTTCTATTGAGACTGGAAACATAATAGAAGTGAGGG-AAAAAGAATTTAAATTGTGGAT-ATTTGAGTTTTATACCTAGGAGTTTGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGA-- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088182 176 + 128169293 GATAATTGAATCTACATCTGTAATGTTTGAAAAGCATTAGA------------TTTCTGG-A-TTTGCGT---TGATATCTATTGAGACTGGGAACATAATGGAAATGAAGG-AAAAATCATTTAAATTGTGGAT-ATTTGAGTTTTATATGTAGGAGTGTGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGG-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17668913 187 + 18371965 GATAATTGAATCTGTATCTGTAATGTTTGAGAAGCATTAGAATAATGCTT-TGTTTCTGG-A-TTAGCAT---TGATAGCTATTGAGACTGGGAACATGATAGAAGTGAAGG-AAGAATCATTTAAATTGTGGGT-ATTTGAGTTTTATACATAGGAGTTTGAGAAATATATTTTGTTAC------TATCAAAGCAGTTGA-- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2202851 188 - 3566421 GATAAATGAATCTGTATCTGTAATGTTTGAGAAGCATTAGAATAATGCTCGTACTTCTGG-A-TTAGCAT---TGATGCTTATTGAGACTGGGAACATAATGGAAGTGAAGG-AAAAATCATTTAAATTGTGGAT-ATTTGAGTCTTATACATAGGAGTTTGAGAAATATATTTTGTTGC------TATCAAAGCAGTTGA-- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646132 197 - 14340318 GAAAATTGAATTTACATCTATGATGTTTGAGAAGCATTAGAACAATGCTTGCTTTTCTGGCA-TAGGCATAGATAATGTTTTATGATAGTACGAACATAGAAGGAAAGGAAA-GAAAAAATTTTAATTTG-GTAT-ATTTGAGTTTTAAGCATAGTATTTTGAGAAATATATTTTGTTAATGCGCGTGTCAAAGCCACTGA-- i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 310311 192 - 1446996 GAACATTGAATCTGTAACTGTGCCG-GGGAGAAGCATTTGAATACTGCTTAGGTTTCTGG-GCTAGGCAAGCGCAATATTTCTTGATAGTGAGAATATAATAGAAGTGAAGGCAAAAAGGTCTTCAATTTTGGGTCATTTCCATTTTAAACATATGAGTTC---AAAAACATATAGTTAC------TATCGATACAGTTGAGA i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4108689 888 + 55844845 I e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=896893.000000 s hg38.chr14_KI270725v1_random 125981 98 + 172810 CACAAGAGTGTACA--AAATTCCCTAATTGTGTCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAACAGAAATAGC----AAAAAAGCAC----AAATAAA---T s panTro5.chr1 126708071 98 + 228573443 CCCAAGGTTGTACA--AAATTCCCTAATTGTGTCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAACAGAAATAGC----AAAAAAGCAC----AAATAAA---T i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688283 97 + 162613886 CACAAAAGTGT-CC--AAATTCCCTAATTGTGTCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAGAACAGAAATAGC----AAAAAAGCAC----AAATAAA---T i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109291 98 + 126596 CCCAAGAGTGTACA--AAATTCCCTAATTGTGTCTATGTGGAGAAGACATAGACAA-ACAGAGAACAGCAAAGCAGAATTAGC----AAAAAAGCAC----AAATAAA---T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696457 98 + 72422247 CACAAGAGTGTACA--AAATTCCCTAATTGTGTCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAACAGAAATAGC----AAAAAAGCAC----AAAAAAA---T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148679 95 - 99891981 CACAAGAGTGTACA--GAATTCCCTAGCTGTGGCTATGTGG---AGACATAGACAA-ACAGAGAATACCAAAACAGAAATAAC----AAAAAAGCAG----AAATAAA---T i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378825 104 + 185818997 CACTAGAGTGTACA--AAATTCCCTAATTGCGGCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAGCAGAAATAGC--AAAAAAAAGCACAAACAAATAAA---T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024576 104 - 192294377 CACTAGAGTGTACA--AAACTCCCTAATTGCGGCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAGCAGAAATAGC--AAAAAAAAGCACAAACAAATAAA---T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371655 105 - 3123512 CACTAGAGTGTACA--AAATTCCCTAATTGCGGCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAGCAGAAATAGC-AAAAAAAAAGCACAAACAAATAAA---T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605299 104 - 10077455 CACTAGAGTGTACA--AAATTCCCTAATTGCGGCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAGCAGAAATAGC--AAAAAAAAGCACAAACAAATAAA---T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543067 105 - 127223203 CACTAGAGTGTACA--AAATTCCCTAATTGCGGCTATGTGGAGAAGACATAGACAA-ACAGAGAATAGCAAAAAAATAGCAAA-AAAAAAAAAGCACAAAGAAATAAA---T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 674958 101 + 1799296 CACTAGAGTGTACA--AAATTCCCTTATTGCGACTATGTGGAGAAGACatagacaa-acagagaatagcaaagcagaaatagc-aaaGAAAAAGCAC----AAATAAA---T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211311 106 - 6934359 CACAAGAGTGTACA--AAATTCCCTAATTGTGGGTATGTGGAGAAGACGTAGACAA-ACAGAGAATGGCAAAGCAGAAATAGCAAAAAAAAAAGCACAAACAAATAAA---T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088358 89 + 128169293 -ACAACAGTATACA--AAAGTCCCTAATTGTGGCTGTGTGGAGAAGACAT---------AGAGAATAGCAAAGCAGAAACAGC----AAAAAAGCAC----AAATAAG---T i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17669100 89 + 18371965 -ACAACAGTTTACA--AAAGTCCCTAATCATGGCTATGTGGAGAAGACAT---------AGAGAATAGCAAAGCAGAAACAGC----AAAACAGCAC----AAATAAG---A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203039 92 - 3566421 -ACAACAGTTTACA--AAAGTCCCTAATTGTGGCTATGTGGAGAAGACATAG-----ACAGAGAATAGCAAAGCAGAAACAGC----AAAAAAGCAC----AATTAAG---- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646329 99 - 14340318 AACAAAAGTGTATACCAAATTCCCTAAGCCTGCCTATGGGGAGAAGAGGCAGACAAGAAAGCGGCTGGCTG-GCAGATGTCGC-----CAAACACAT----GAATTTT---T i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4109577 98 + 55844845 CAGAAAAGTATACA--AAATTCCTTAAGTATGCCTGTGTGGAAAAGA-ATAAATGA-GCAGAAAACGGAGGGGCAGAAATAGC------CAGAGCAC----AAAAAGAGATT i canFam3.chr18 I 888 C 0 s dasNov3.JH578441 310503 87 - 1446996 CATAAAAACATAAA--ATAATCCTTAAGTGTGTCTTTATAGAGAAGA------------GGAGACCAGCAGGGCAGAAGTAGC----CAaaacaaac----aaacaaa---c i dasNov3.JH578441 C 0 I 20 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=135820.000000 s hg38.chr14_KI270725v1_random 126079 11 + 172810 TTTACCTGTAT s panTro5.chr1 126708169 11 + 228573443 TTTACCTGTAT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688380 11 + 162613886 TTTACCTGTAT i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109389 11 + 126596 TTTACCTGTAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696555 11 + 72422247 TTTACCTGTAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148774 11 - 99891981 TTTACCTGTAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378929 11 + 185818997 TTTACCTGTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024680 11 - 192294377 TTTACCTGTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371760 11 - 3123512 TTTACCTGTAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605403 11 - 10077455 TTTACCTGTAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543172 11 - 127223203 TTTACCTGTAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675059 11 + 1799296 TTTACCTGTAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211417 11 - 6934359 TTTACCTGTAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088447 11 + 128169293 TTTTCCTGTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17669189 11 + 18371965 TTTTCCTGTAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203131 11 - 3566421 TTTTCCTGTAT i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646428 11 - 14340318 TTTACTTGTAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4109675 11 + 55844845 TTTACTGGCAC i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 310590 20 - 1446996 I e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=922706.000000 s hg38.chr14_KI270725v1_random 126090 82 + 172810 TTTTAAGT---A-----AAAGCCAATTAGAGAAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTCA---TAATATAGTTGA s panTro5.chr1 126708180 82 + 228573443 TTTTAAGT---A-----AAAGCCAATTAGAGAAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTCA---TAATATAGTTGA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688391 82 + 162613886 TTTTAAGT---A-----AAAGCCAATTAGAGAAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTCA---TAATATAGTTGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109400 82 + 126596 TTTTACAT---A-----AAAGCCAATTAGAGTTGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAGTATAGTTGA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696566 82 + 72422247 TTTTACGT---A-----AAAGCCAATTAGAGTAGGAAAACATGAAA-TTTGTGTTTTATAAAA--------------ATTTTTC--TGTTTCTCA---TAATATAGTTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148785 76 - 99891981 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52378940 76 + 185818997 ------GT---A-----AAAGCCAATTGGAGTAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024691 76 - 192294377 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371771 76 - 3123512 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605414 76 - 10077455 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACATGACA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543183 74 - 127223203 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACATGAAA-TTTGTGTTTTAACAAA--------------ATTTT----TCTTTCTTA---TAATATAGTTGA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675070 76 + 1799296 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACATGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211428 76 - 6934359 ------GT---A-----AAAGCCAATTAGAGTAGGAAAACACGAAA-TTTGTGTTTTATCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088458 76 + 128169293 ------AT---A-----AAAGCCAATTAGAGTAGGAAAATATGAAA-TTTGCATTTTGTCAAA--------------ATTTTTC--TCTTTCTTA---AAATATAGTTGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17669200 79 + 18371965 ------GTAAAA-----AAAGCCAATTAGAGAAGGAAAATATGAAA-TTTGTGTTTTGTCAAA--------------ATTTTTC--TCTTTCTTA---TAATATAGTTGA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203142 71 - 3566421 ------GT---A-----AAAGCCAATTAGAGTAGGAAAATATGAAA-TTTGTGTTTTGTCAAA--------------ATTTTTC--TCTTTCT--------TATAGTTGA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646439 76 - 14340318 ------GT---A-----AAAGCCAGTTAGCATAGAAAAATATGGGA-TTTGTGTTTTGTTAAA--------------AATTATC--TGTTTTTTA---TTATGTAGTTGA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4109686 82 + 55844845 ------AT---A-----AAAGCCAATGAGAGTAGGTAAATATGCGGTTTTGTGTTTTATCAAA--------------ATTTCTCTGTCTTTCTAATTCTGATATAGTTGA i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 310610 99 - 1446996 TTTGAAGC---ATGTGCAAAAACAATTG--ATAGGGAAATGTCAGA-TTTGTATTTTATCAGAAAACAAAATGCTCTATCTTTC--TGTTTCTGA---TAATATAATTGA i dasNov3.JH578441 I 20 I 4390 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=190519.000000 s hg38.chr14_KI270725v1_random 126172 24 + 172810 AAATATTACTGCAAAAAA-TTTGAA s panTro5.chr1 126708262 24 + 228573443 ATATATTACTGGAAAAAA-TTTGAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688473 24 + 162613886 ATATATTACTGGAAAAAA-TTTGAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109482 24 + 126596 TTATATTACTGGAAAAAT-ATTGAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696648 24 + 72422247 TTATATTACTGGAAAAAA-ATGGAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148861 23 - 99891981 TTATATTACTGGAAAAAA--TTGAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379016 23 + 185818997 TTATATTACTGGAAAAAA--TTGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024767 23 - 192294377 TTATATTACTGGAAAAAA--TTGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371847 23 - 3123512 TTATATTACTGGAAAAAA--TTGAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605490 23 - 10077455 TTATATTACTGGAAAAAA--TTGAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543257 23 - 127223203 TTATATTACTGGAAAAAT--TTGAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675146 23 + 1799296 TTATATTACTGGAAAAAA--TTGAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211504 23 - 6934359 TTATATTACTGGAAAAAA--TTGAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088534 22 + 128169293 TTTTATTACTGGTAAAA---TTGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17669279 22 + 18371965 TTTTATTACTGGAAAAA---TTGAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203213 22 - 3566421 TTTTATTACTGGAGAAA---TTGAA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646515 24 - 14340318 TTCTGTAACTGGAAAAAA-CTCAAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4109768 25 + 55844845 CTCTGTGACTAGGAAAAAAAGAAAA i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 310709 4390 - 1446996 I e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=3007313.000000 s hg38.chr14_KI270725v1_random 126196 277 + 172810 GCACTGGTATGTTCAC-AAA-----AAAAGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATACACCTAAACACG-GAAACTGATTTTGCCCTACAGACATGTAGCAAAATGAATGAGTGCAGA--TT-CCTACTGTCATACATCACATAGGATAGTAAAGAAATACATAGTTTTTCCCAAGAT-AGGGCATCACACAGAAGCTCTTCCC---TAAAGCTAGGACCA-AAAT-TTATATCCTCAGTATAAAGAAGAATCAGAGGTAAATTAGTCCCATT---- s panTro5.chr1 126708286 278 + 228573443 GCACTGGTATGTTCAC-AAAT----AAAAGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATAACTAAACACC-GAAACTGATTTTGCCCTACAGACATGTAGCAAAATGAATGAGTGCAGA--TT-CCTACTGTCATACATCACATAGGACAGTAAAAAAATACGTAGTTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATCCTCAGTATAAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688497 278 + 162613886 GCACCGGTATGTTCAC-AACT----AAAAGT--------AAATTATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACGA--------AATATAACTAAACACC-GAAACTGATTTTGCCCTACAGACATGTAGCAAAATGAATGAGTGAAGA--TT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATACATAGTTTTTCCCAAGAT-AGGGCATCACATAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTCTATCCTCAGTATAAAGAAGAATCAGAGGAAAATTAGTCCCATT---- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109506 277 + 126596 GCATTGGTATGTTCAC-AAAA----AAAAGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATACACCTAAACACT-GAAACTGATTTTGCCCTACGGACATGTAGCAAAATAAATGAGTGCAGA--TT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATACATAGTTTTTCCCAAGAT-AGGCCATGACACAGGAGCTCTTCCC---TAAAGCTAGGACCA-AAAT-TTATATCCTCAGTATAAAGAAGAATCAGAGGTAAATTAGT-CCATT---- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696672 278 + 72422247 GCATTGGTATGTTCAC-AAAA----AAAAGT--------AAAATACAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATACCTAAACACC-GAAACTGATTTTGCCCTATGGACATGTACCAAAATGAATGAGTGCAGA--TT-CCTACTGCCATACATCACATAGGACAGTAAAGAAATACATAGTTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGAACCA-AAAT-TTCTATCCCCAGTATAAAGAAGAATCAGAGGTAAATTAATCCCATT---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44148884 272 - 99891981 GCATTGGAATGTTCAC-ACAA----AAAAGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AA------TAAACACT-GAAACTGATTTTGCCCTATGGACATGTACCAAAAAGAATGAGTGTAGA--TT-CCTACTTTCATACATCACATAGGACAGTAAAGAAATATATAGTTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATCCTCAGTATAAGGAAGAATCAGAGGCAGATTAGTCCCATT---- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379039 279 + 185818997 GCATTGGTATGTTCAC-AAAA----AAAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATACCTAAACACC-GAGACTGATTTTTCCCTACGGACATGTACCAAAATGAATGAGTGTGGA-TTT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATATATAGCTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATTCTCAATATGAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125024790 279 - 192294377 GCATTGGTATGTTCAC-AAAA----AAAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATACCTAAACACC-GAGACTGATTTTTCCCTACGGACATGTACCAAAATGAATGAGTGTGGA-TTT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATATATAGCTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATTCTCAATATGAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 371870 279 - 3123512 GCATTGGTATGTTCAC-AAAA----AAAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATACCTAAACACC-GAGACTGATTTTGCCCTACGGACATGTACCAAAATGAATGAGTGTGGA-TTT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATATATAGCTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATTCTCAATATGAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605513 280 - 10077455 GCATTGGTATGTTCACAAAAA----AAAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATACCTAAACACC-GAAACTGATTTTGCCCTACGGACATGTACCGAAATGAATGAGTGTGAA-TTT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATATATAGCTTTTCCCAAGAT-AGGGCATCACACAGAAGCTCTTCCC---TAAAGCTAGGACCA-AAAT-TTATATTCTCAATATGAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543280 280 - 127223203 GCATTGGTATGTTCACAAAAA----AAAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------ACTATACCTAAACACC-AAAACTGATTTTGCCCTACGGACATGTACCAAAATGAATGAGTGTGGA-TTT-CCTACTGTCATACGTCACATAGGACAGTAAAGAAAAATATAGCTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAACCTAGGACCA-AAAT-GTATATTCTCAATATGAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675169 279 + 1799296 GCATTGGTATGTTCAC-AAAA----ACAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGGAGCAGACAA--------AATATACCTAAACACC-GAAACTGATTTTGCCCTACGGACATATACCAAAATGAATGAGTGTGAA-TTT-CCTACTGTCATACATCACATAGGACAGTAAAGAAATATATAGCTTTTCCCAAGAT-AGGGCATCACACAGGAGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATTCTCAATATGAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211527 279 - 6934359 GCATTAGTATGTTCAC-AAAA----AAAGGT--------AAAATATAAGGTC--------------------AAAACCATGGGAATGCAGGAAGCAGACAA--------AATGTACCTAAACACC-GAAACTGATTTTGCCCTACGGACATGTACCAAAATGAATGAGTGTGGA-TTT-CCTACTGTCATACACCACATAGAACAGTAAAGAAATATATAGCTTTTCCCAAGAT-AGGGCATCACACAGGCGCTCCTCCC---TAAAGCTAGGACCA-AAAT-TTATATGCTCAAAATAAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088556 279 + 128169293 GCATTGGTATGCTCAC-AAA-----AAAAGT--------AAAATATAAAGTC--------------------AAAACTATGGGAATGTAGGGAGCAGACAA--------AATATACCTAAACACT-GAAACTGATTTTGTCCTACAGACATGTACCAAAATGAATGAGCATGGA-TTT-CCTACTGTCATACTTTACATAGGACAGTAAAGAAATATATAGCTTTCCCCAAGGA-AGGGCATCACACAGGAGCTCCTTCC--ATAAAGCTAGGACGA-AAAT-TAACATCCTCAGTATAAAGAAAAATCAGAGGTAAATTAGTTGCATT---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17669301 279 + 18371965 GCATTGATATGCTCAC-AAA-----ATATGT--------AAAATGTAAAGTC--------------------AAAACTATGGGAATGTAGGGAGCAGACAA--------AATGTACCTAAACACT-GAAACAGATTTTGCCCTACAGACATATACCAAAATGAATCAGCATGGA-TTT-CCTACTGTCATACTTTACATAGGACAGTGAAGAAATATATAGCTTTTCCcaaggt-agggcatcacacaggagctcctgtc--ataaagctaggacga-aagt-ttacatcctcagtataaagaagaatcagaggtaaattagtcccatt---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203235 279 - 3566421 GCATTGGTATGCTCAC-AAA-----AAAAGT--------AAAATGTAAAGTC--------------------AAAAGTATGGGAATGTAGGGAGGAGACAA--------AATATACCTAAACACT-GAAACTGATTTTGCCCGACAGACATGTACCAAAATGAATGAGCATGGA-TTT-CCTACTGTCATACTTTACATAGCACAGTAAAGAAATATATAGCTTTTCCCAAGGT-AGGGCATCACACAGGAGCTCCTCCC--ATAAAGCTAGGACGA-AAAT-TTACATCCTCAGTATAAAGAAGAATCAGAGGTAAATTAGTCCCATT---- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646539 268 - 14340318 GCATCAATAT--TCTC-AAAT----AATAAT--------AAAATTTTAGGGC--------------------AAAACTATGTGAGCACAGGCACCCGAAAA--------AAACATGCTTAACACTGGGAACTGATTTTGCCCCTAGGAAATTTACTGACATGAATgagctcgag-tttgcttggtatcatgcaggacacaggtgggt---------------ctttcccaagat-aggatgtggtacaagataccttgtcttgtaaagctgtgacca-aaatgttaagtcctcagtataaagatgggtgagaagcaaatcagcctcata---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4109793 319 + 55844845 GCATTAAGATTCTCAT-AAAGTAGTAAATGTTTTAGGCCAAAGTCTGAATTCTTCAGGGACCaagagaaaaaaaaaaaaaaagaaagaaagaaaaagaaaaagaaaaagaaaaCAACCTCACACT-GGAACTGGTTTTGCCCTAAAGACATGTACTAAACTGAATAGGTTTGAC-TTTGCTTAGTGTCATGCAGCAGATAGAATAATAAGCAAATATTAAGCCTTTTCTAAGCTGAGAGCCACATAGAGGATCCTTTTCC--ATAAAG--AATTCTA-AAGA-TTACA-CTTCATTGTAAAAATGAATCAGAAATAAATCAGCCCTGTT---- i canFam3.chr18 C 0 I 189 s dasNov3.JH578441 315099 285 - 1446996 GCATTCATATTCTGCC-AAGAC---AGTAAG--------GAACTTTTAGGCT--------------------AATACTATGTGAATACAGG-ATCAGG-AA--------AATATACCT-AACACT-GGAAATGAACTTGCTGTAAGGACCTGTGCTAAAATGAGTGCACTTAGGTTTT-CTTAGCATCAGGAAGCACATAGGATAGAAAACAATTATTGGTCATGTCCCAAGAT-AGGAGGGCATGCAGGGGTCCTTCGC-TATATAGCTGGGAATACAAAG-CTACATCCTTAGTATAAAGATGAATCAGATGTAACTAGGTTTCATATTCT i dasNov3.JH578441 I 4390 C 0 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=680511.000000 s hg38.chr14_KI270725v1_random 126473 59 + 172810 TCACATTCCCTGGAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC s panTro5.chr1 126708564 59 + 228573443 TCACATTCCCTGGAAATGGCAAATAAAAATGACTTGAGATTGGACAGACTTAAAGA-AAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688775 59 + 162613886 TCACATTCCCTGGAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109783 59 + 126596 TCACATTCCCTGGAAATGGCAAATAAAAATGACTTGAGATTGGAGAGATTTAAAGA-AAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5696950 59 + 72422247 TCACATTCCCTGAAAACGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149156 59 - 99891981 TAACATTTCCTGCAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379318 59 + 185818997 TCACTTTCCCTGAAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025069 59 - 192294377 TCACTTTCCCTGAAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372149 59 - 3123512 TCACTTTCCCTGAAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605793 59 - 10077455 TCACATTCCCTGCAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543560 59 - 127223203 TCACATTCCCTGAAAATGGCAAATAAAAATGACTTAAGATTGGACAGATTTAAAGA-AAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675448 59 + 1799296 TCACATTCCCTGCAAATGGCAAATAAAAATGACTTGAGATTGGACAGATTTAAAGA-AAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211806 59 - 6934359 TCACATTCCCTGCAAATGGCAAATAAAAATGACTTAAGATTGGACAGATTTAAAGA-AAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088835 59 + 128169293 CCACATTCCCTGCAAATGGCAAATAAAAATGATTTGAGATTGGACAGATTAAAAGA-AAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17669580 59 + 18371965 ccacattccctgcaaatggcaaataaaaatgatttgagattggacacattaaaaga-aaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203514 59 - 3566421 TCACATTCCCTGCAAATGGCAAATAAAAATGACTTGACATTGGACAGATTAAAAGA-AAA i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1646807 57 - 14340318 tcacattcccaggaaattgtgaataaagttgacttgagactaaacacatc-aaaga-aa- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4110301 59 + 55844845 CAACACCGCCAGGAAATTGTAAGT-AAGTTGACTTAAAACTGAACAGATTAAAAGAGAAA i canFam3.chr18 I 189 C 0 s dasNov3.JH578441 315384 57 - 1446996 TCACCTT--CAGAAACATACTattaaggctgactggaggtttagcagattaaatgc-agc i dasNov3.JH578441 C 0 I 1925 e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=3239751.000000 s hg38.chr14_KI270725v1_random 126532 312 + 172810 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATATGT-------------CCAAACACCTTTAGGCCAAGAATTAATATAATGTGGTCCCAGAATGGTGGTGCCTTTAGAAGACTCAC---AACAAATTCAAATTCTCTTTGGCAAATTTTCTTCTTACTAATATGCAAAAGTGCACAATAATAATTTTCAGAGAAAAATAAATCTTTGTCATTCAAAGGC-ATCTAAGTATGCAAGGAAATGATATTCTA----CCATTTGAAAGGAAAGCAGAAAAAGAGTACAAACCGATCCACAAAGGTTC- s panTro5.chr1 126708623 313 + 228573443 TCAATCGTTAATGATTTACAgcaactaatttaaaaattgtttaaatgtgcagtccaaacatacgt-------------ctgAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATGGTGGTGCCTTTAGTAGAATCAC--AAAAAAATTGAAATTCTCTTTGGCAAATTTTCTATTTACTAATCCACAAAAGTGCACAAAAATAATTTTCAGAGAAAAATAAATATTTGTCATTCAAAGGC-ATCTAAGTATGCAAGGAAATGATATTCCA----CCATTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATACACAAAGGTTC- i panTro5.chr1 C 0 C 0 s panPan2.chr7 74688834 311 + 162613886 TCAATCGTTAATGATTTACAGCAACTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATAggt-------------ccgaacacctttaggccaagaattaacataatgtggtcccagaatggtggtgcctttagTAGAATCAC----AAAAGTTCAAATTCTCTTTGGGAAATTTTCTATTTACTTATCTGCAAAAGCGCACAAAAATAATTTTCAGAGAAAAATAAATATTTGTCATTCAAAGGC-ATCTAAGTATGCAAGGAAATGATATTCCA----CGATTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCCACAAAGGTTC- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 109842 311 + 126596 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGTTTAAATGTGCTGTCCAAACATACGT-------------CCAAACACCTTTAGGCCAAGAATTAATATAATGTGGTCCCAGAATGGTGGTGCCTTTAGTAGACTCAA----AAAAATTCAAATTCTCCTTGGCAAATTTTCTTCTTACTAATATGCAAAAGTGCACAATAATAATTTTCAGAGAAAAATAAACCTTTGTCATTCAAAGAC-ATCTAAGTACACAAGGAAATGATATTCCA----CCATTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCCACAAAGGTTC- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697009 313 + 72422247 TCAATCATTAATGATTTACAGAAATTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATACgt-------------ccaaacacctttaggccaacaattaacataatgtggtcccagaatggtggtgcctttagtagactcac--aaaaaaattcaaattctctttggcaaattttcttcttactaatccacaaaagtgcacaaaaataattttcagagaaaaataaatatttgtcattcaaaggc-atctaagtacacaaggaaatgatattcca----tcatttgaaaggaaagcagaaaaagagtacaaacagatccacaaaggttc- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149215 312 - 99891981 TCAATCATTAATGATTTACAGCAATTAATTTAAATATTGTTTAATTGTGCGGTCCAAACATATgt-------------ccaaacacctttaggccaagaattaacataatgtggtcccagaatggtggtgcctttagtagactcac--aaaaaaattcaaattctctttggCAAATTTTTTTCCAAC-AATCCTCAAAAGTGCACAAAAATAATTTTCAAAGAAAAATAAATATTTGTCATTCAAAGGC-ATCTAAGTACACAAGGAAATGATATTCCA----CCATTTGAAAGCAAAGCAGAAAAAGAGTACAAACAGATCCACAAAGGTTC- i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379377 326 + 185818997 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGGTTAAATGTGCAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATAGGGGTGCCTTTAGTAGACTCAT--GAAAAAATTGAAATTCTCTTTGGCATATTTTCCTCATACTAATCCTCAAAAGTGCACAAAAATAATTTTCTAAGAAAAATAAATATTTATCATTCAAAGGC-TTCTAAGTACACAAGGAAATGATATTCCA----CTGTTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCTGCAAAGGTTT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025128 326 - 192294377 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATAGGGGTGCCTTTAGTAGACTCAT--GAAAAAATTGAAATTCTCTTTGGCATATTTTCCTCATACTAATCCTCAAAAGTGCACAAAAATAATTTTCTAAGAAAAATAAATATTTATCATTCAAAGGC-TTCTAAGTACACAAGGAAATGATATTCCA----CTGTTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCTGCAAAGGTTT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372208 322 - 3123512 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATAGGGGTGCCTTTAGTAGACTCAT--GAAAAAATTGAAATTCTCTTTGGCATATTTTCCTCATACTAATCCTCAAAAGTGCACAAAAATAATTTTCTAAGAAAAATAAA----TATCATTCAAAGGC-TTCTAAGTACACAAGGAAATGATATTCCA----CTGTTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCTGCAAAGGTTT- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7605852 326 - 10077455 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATAGGGGTGCCTTTAGTAGACTCAT--GAAAAAATTGAAATTCTCTTTGGCATATTTTCCTCATACTAATCCTCAAAAGTGCACAAAAATAATTTTCTAAGAAAAATAAATATTTATCATTCAAAGGC-TTCTAAGTACACAAGGAAATGATATTCCA----CCGTTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCTGCAAAGGTTT- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543619 328 - 127223203 TCAATCATTAATGATTTACAGCAATTAATTTAAAAATTGTTAAAATGTGCAGTCCAAACATATGTCACTTGGGAAGCCCAAAACTCCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATAGTGGTGCCTTTAGTAGACTCACA-AAAAAAATTGAAATTCTCTTTGGCATATTTTCTTCATACTAATCCTCAAAAGTGCACAAAAATAATTTTCTAAGAAAAATAAATATTTATCATTCAAAGGCTTTCTAAGTACACAAGGAAATGATATTCCA----CCGTTTGAAAAGAAAGCAGAAAAAGAGTACAAACAAATCTACAACGGTTT- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675507 322 + 1799296 TCAATCATTAACGATTTACAGCAATTAATTTAAAAATTGTTTAAATGTGCAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATAGGGGTGCCTTTAGTAGACTCAT--GAAAAAATTGAAATTCTCTTTGGCATATTTTCCTCATGCTAATCCTCAAAAGTGCACAAAAATAATTTTCTAAGAAAAATAAA----TATCATTCAAAGGC-TTCTAAGTACACAAGGAAATGATATTCCA----CCATTTGAAAGGAAAGCAGAAAAAGAGTACAAACAGATCTACAAAGGTTT- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5211865 329 - 6934359 TCAATCATTAATGATTTACAGCAGTTAATTTAAAAATTGTTTAAATGGGCAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTAGGCCAAGAATTAACATAATGTGGTCCCAGAATTGTGGTGCCTTTAGTAGACTCACACAAAAAAATTGAAATTCTCTTTGGCATATTTTCTTCATACTGATCCTCAGAAGTGCACAAAAATAATGTTCTAAGAAAAATAAATATTTATCATTCAAAGGCTTTCTAAGTACACAAGGAAATGATAGTCCA----CCGTTTGAAAGGAAAGCAGAAAAAGAGTGCAAACAGATCCACAAAGGTTT- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20088894 325 + 128169293 CCAATCATTAATGCTTTATGGCAATTAA-TTAGAAATGGTTTAAATGtgcagtccaaacatatgtcacttgggaagtccaaaacacctttaggccaatacttaacataatgtgatcccagaatggtggttcctttagtagactcac--aaagaaattcaaattctctttggCAAATTGTCTTCATACTAATTCTCAACAGTGCACATAAATAATTTTCTAAGAAAAATTAATATTTTTCATTCAAAAGC-ATCTGAGTACACAAGGAAATGATACTTCA----CCATTTGAAAGGAAAGCAGCAAAAGAGTATAAACAGCTCTATAAAGATTC- i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 17669639 325 + 18371965 ccaatcattaatgatttacggcaattaa-ttagaaattgtttaaatgtgtggtccaaacatatgtcacttgggaagcccaaaacacctttgggccaatacttaacataatgtgatcccagaatgatggttcctttagtagactcac--aaataaattcaaattctctttggcaaattgtcttcatactaatcctcaaaagtgtgcaaaaataattttctaagaaaaattaatatttttcattcaaaagc-atctgagtacacaagaaaatgatactcca----ccatttgaaaggaaagcagcaaaagagtataaacagatctgtaaagattc- i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 2203573 325 - 3566421 CCAATCATTAATGATGTATGGCAATTAA-TTATAAATGGATTAAATGTGTAGTCCAAACATATGTCACTTGGGAAGTCCAAAACACCTTTGGGCCAATACTTAACATAATGTGATCCCAGAACGGTGGTTCCTTTACTAGACTCAC--AAAGAAATTCAAATTCTCTTTGGCAAATTGTCTTCATACTAATCCTCAAAACTGTACAAAAATAATTTTCTAAGAAAAATTAATATTTTTCATTCAAAAGC-ATCTGAGCACACAAGGAAATGATATGCCA----CCATTTGAAAGGAAAGCAGCAAAAGAGTATAAACAGCTCTATAAAGATTC- i cebCap1.NW_016107540v1 C 0 I 77 s otoGar3.GL873564 1646864 314 - 14340318 --aatcattaaggat-tacagcaac-aatttaggcattgtttaaaggtacagcccaagcttaa--cactggg---ctcaaaaaaaccctgaggcaaagaattaatatccagtgatcccagaatgagggtgtcagtaggagactcag--aagcaaattcaaatcctctttgatcaattcacttccgtgtaatcctcaaaagtgcacaaaaatacttttctaaaaaaaaga-----ttgttatttaaaaat-atctaaatatataagaaaatgatgctctatcattcatttataaaaagagcagaaaa--aacataaacagattcacagagactt- i otoGar3.GL873564 C 0 I 2 s canFam3.chr18 4110360 296 + 55844845 TAAATCATAAAGAATTAATAGCAGC-AATGTAGGCATTGTTTATATGTGCAGCCCAAACAT--GccacttgggaaatccaaaaaattcttaagtcaagaattagtataaggtggtcccagaacagtgatgtctttaagagactcacagaaacaaattcaaatcctctttgTTCAGTTGCC-----ACTAATCCTCAAAA-TGCAT----GCAATTTTCTAATAAAAATGAATGTTTGGCTTTCAAAAAT-CTCT------------AAATGATAGTCAA----TTTTT-----AAAAATCTGGAAAAATATATAAAAAA---CACAAAGAATTC i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=356792.000000 s hg38.chr14_KI270725v1_random 126844 60 + 172810 -ATTAGTAGAAATATCACTGTTAGATTATAAAGCTCATTTAATTT---CAAGAAATTTTTTAAA s panTro5.chr1 126708936 60 + 228573443 -TTTAGTAGAAATATCACTGTTAGATTATAAAGCATATTTGCTTT---CAAAAATTTTTTTAAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689145 59 + 162613886 -ATTAGTAGAAATATCACTGTTAGATTATAAAGCACATTTGCTTT---CAA-AATATTTTTAAA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110153 59 + 126596 -ATTAGTAGAAATATCACTGTTAGATTATAAAGCACATTTGCTTT---CAA-AAAATTAAAAAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697322 58 + 72422247 -attagtagaaatatca--gttagattataaagcacatttgcttt---aaaaaaatttaaaata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149527 60 - 99891981 -ATTAGTAGAAATATCATTGTTAGATTACAAAGCACATTAGCTTT---AAAAAAATTTTTTAAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379703 53 + 185818997 -GTTACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTT---AAAAAA-------AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025454 52 - 192294377 -GTTACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTT----AAAAA-------AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372530 53 - 3123512 -GTTACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTT---AAAAAA-------AAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7606178 51 - 10077455 -GTTACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTT-----AAAA-------AAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121543947 56 - 127223203 -GTGACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTTAAAAAAAAA-------AAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675829 52 + 1799296 -GTTACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTT----AAAAA-------AAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5212194 54 - 6934359 -GTTACCAGAAATATCACTGTTAGATCATAAAGCACATTTGCTTT--AAAAAAA-------AAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20089221 53 + 128169293 -GTTACTGGAAATACCACTGTTAGAATATAAAGCACATTTGCTTT---TAAAAA-------ATA i calJac3.chr8 I 2 I 4 s saiBol1.JH378145 17669966 55 + 18371965 -gttactggatatatcactgttagaatataaagcacgtttgcttt-aaaaAAAA-------AAA i saiBol1.JH378145 I 2 I 4 s otoGar3.GL873564 1647180 53 - 14340318 -gttactataaatagcaatgttagattataaaatgaatctgctta---aaaaag-------gaa i otoGar3.GL873564 I 2 I 2 s canFam3.chr18 4110656 24 + 55844845 AGTTACTGGAAACATTATT---------------ACATT------------------------- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e aotNan1.NW_018514471v1 7400105 145 + 9267652 I e cebCap1.NW_016107540v1 2203898 77 - 3566421 I a score=84360.000000 s hg38.chr14_KI270725v1_random 126904 9 + 172810 AAATGAATA s panTro5.chr1 126708996 9 + 228573443 AAATGAATA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689204 9 + 162613886 AAATGAATA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110212 9 + 126596 AAATGAATA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697380 9 + 72422247 aaatgaata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149587 6 - 99891981 AAAC---CA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379756 9 + 185818997 AAATGAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025506 9 - 192294377 AAATGAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372583 9 - 3123512 AAATGAACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7606229 9 - 10077455 AAATGAACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121544003 9 - 127223203 AAATGAACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675881 9 + 1799296 AAATGAACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5212248 9 - 6934359 AAAAGAACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20089278 9 + 128169293 ACATGAACA i calJac3.chr8 I 4 C 0 s saiBol1.JH378145 17670025 9 + 18371965 ACATGAACA i saiBol1.JH378145 I 4 C 0 s cebCap1.NW_016107540v1 2203975 9 - 3566421 ACATGAACA i cebCap1.NW_016107540v1 I 77 C 0 s otoGar3.GL873564 1647235 9 - 14340318 acatgaata i otoGar3.GL873564 I 2 C 0 s canFam3.chr18 4110680 7 + 55844845 --ATGAATA i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e aotNan1.NW_018514471v1 7400105 145 + 9267652 I a score=3522895.000000 s hg38.chr14_KI270725v1_random 126913 305 + 172810 TATTTTTAGGAGACT-AAAAAATTGATGTAGCAAATTTGAAAAGTAGTTTGt------atatag-tattttaaattaaaaactcaaaaatgaactcatcagattagacatggccatggtgagagttcat----------------------aaatatttcagaatgc-attacagaaaattttaaaaaatgcacaatgtggacagaatcatgaagagacatggaagatacagtgagaaagtgtagc---atgtgtttagtgagtgttctcttagaa----gaagggaac--tgggaagggacaatatgtgatggtattttggct-------------------gaaagttctctagactcttgt s panTro5.chr1 126709005 312 + 228573443 TATTGTTAGGAGACT-AAAAAATTCATGTAGTAAATTTTGAAAGTAGTTTGTATaaaaatatagttattttaaattaaaaactcaaaaatgaactcatcagattagacatggccaaggtgagagttcat----------------------aaatatttcagaatgc-attactgaaaattttaaaaaatgtaaaatgtggacagaatgatgaagagacatggaagatacagtgagaaagtgtagc---atgtgtttagtgagtgttctcatagaa----gaagggaat--tgggaagggacaatatgtgatggcattttggct-------------------gaaagttccctagacttttgt i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689213 312 + 162613886 TATTGTTAGGAGACT-AAAAACTTGATGTAGCAAATTTGAAAAGTAGTTTGTATaaaaatatagttattttaaattaaaaactcaaaaatgtactcatcagattagacatgaccaaggtgagagttcat----------------------aaatatttcagaattc-attacagaaaattttaaaaaatgtaaaatgtggacagaatgatgaagagacatggaaaatacagtgagaaagtgtagc---atgtgtttagagagtgctctcatagaa----gaagggaac--tgggaagggacaatatgtgatggtattttggct-------------------gaaatctccctagacttttgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110221 305 + 126596 TATTTTAAGGAGACT-AAAAAATTGATGTAGCAAATTTGAAAAGTAGTTTGT------atatag-tattttaaattaaaaactcaaaaatgtactcatcagattagacatggccatggtgagagttcat----------------------aaatatttcagaatgc-attacagaaaattttaaaaaatgcacaatgtggacagagtcatgaagagacatggaagatacagtgagaaagtgtagc---atgtgtttagtgagtgttctcatagag----gaagggaat--tgggaagggacaatatgtgatggtattttggct-------------------gaaagttctctagacatttgt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697389 310 + 72422247 tatttgtaggagact-aaaaaattgatgtagcaaatttgaaaagtagtttgtataaaaacatag-tattttaaattaaaaactcaaaaatgaactcatcagattagacatggccatggtgagagttcat----------------------aaatatttcagaatgc-attacaaaaaatttttaaaaatgcaaaatgtggacagaatcatgaagagacatggaagatacagtaagaaagtgtagc---atgtgtttagtgagtgttctcatagaa----gaagggaac--tgggaagggacaatatgtgatggta-tttggct-------------------gaaagttctctagacttttgt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149593 312 - 99891981 TATTTTTAGGGGACTAAAAAAATTGATGTAGCAAATTTGAAAAGTAGTTTGTGTaaaaatatag-tattttaaattaaaaactcaaaaatgaactcatcagattagacatggccatggtgagagttaat----------------------aaatatttcagaatgc-attacagataatttaaaaaaatgcaaaatgtggacagaatcattaagagacatggaagatgcagtgagaaagtgtagc---atgtgtttagtgagtgttctcatagaa----gaagggaac--tgggaagggacaatatgtgatggtattttggct-------------------gaaagttctctagatttttgt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52379765 308 + 185818997 TATT-TTAGGAGACTAAAAACATTGATGTAGCAAATCTGAAAAGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcagattagaaatggccatggtgagagttaat----------------------aagtatttcagaatgc-attacagataacttggaaaaatgcaaaatgtggacagaatcattaaaagacatggaagttgcagtgagaaaatgtagc---atgtatttagtgagtgttctcata-------gaagggaac--taggaagagataatatgtgatggtattttgact-------------------gaaagttctctagacttttgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025515 308 - 192294377 TATT-TTAGGAGACTAAAAACATTGATGTAGCAAATCTGAAAAGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcagattagaaatggccatggtgagagttaat----------------------aaatatttcagaatgc-attacagataacttggaaaaatgcaaaatgtggacagaatcattaaaagacatggaagttgcagtgagaaaatgtagc---atgtatttagtgagtgttctcata-------gaagggaac--taggaagagataatatgtgatggtattttgact-------------------gaaagttctctagacttttgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372592 308 - 3123512 TATT-TTAGGAGACTAAAAACATTGATGTAGCAAATCTGAAAAGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcagattagaaatggccatggtgagagttaat----------------------aaatatttcagaatgc-attacagataacttggaaaaatgcaaaatgtggacagaatcattaaaagacatggaagttgcagtgagaaaatgtagc---atgtatttagtgagtgttctcata-------gaagggaac--taggaagagataatatgtgatggtattttgact-------------------gaaagttctctagacttttgt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7606238 308 - 10077455 TATT-TTAGGAGACTAAAAAAATTGATGTAGCAAATCTGAAAAGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcagattagaaatggccatggtgagagttaat----------------------aaatatttcagaatgc-attatagataatttgaaaaaatgcaaaatgtggacagaatcattaaaagacatggaagttgcagtgagaaaatgtagc---atgtatttagtgagtgttctcaca-------gaagggaac--taggaagggataatatgtgatggtattttgact-------------------gaaagttctctagacttttgt i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 121544012 307 - 127223203 TATT-TTAGGAGACTAAAAAAATTGATGTAGCAAATCTGAAAAGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcagattagacatggccatgatgagagttaat----------------------aaatatttcagaatgc-attacagataatttggaaaaatgaaaaatgtggacagaatcattaaaagacatggaagttgcagtgag-aaatgtagc---atgtatttagtgagtgttctcaca-------gaagggaac--taggaagggataatatgtgatggtattttgact-------------------gaaagttctctagacttttgt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 675890 308 + 1799296 TATT-TTAGGAGACTAAAAAAATTGATGTAGCAAATCTGAAAAGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcagattagacatggccatggtgagagttaat----------------------aaatatttcagaatgc-attacagataatttggaaaaatgcaaaatgtggacagaatcattaaaagacatggaagttgcagtgagaaaatgtagc---atgtatttagtgagtgttctcaca-------gaagggaac--taagaagggataatatgtgatgatattttgact-------------------gaaagttctctagacttttgt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5212257 308 - 6934359 TATT-TTAGGAGACTAAAAAAATTGATGTAGCAAATCTGAAATGTAGTTTGTATaaaaatacag-tattttaaattaaaaactcaaaaatgaactcatcgtattagacatggccatggtgagagttaac----------------------agatatttcagaatgc-attacagataatttgaaaaaatgcaaaatgtggacagaatcattaaaagacatggaagttgcagtgagaaagtgtagc---atgtatttagtgagtgttttcata-------gaagggaac--taggaaggaataatgtgtgatggtattttggct-------------------gaaagttctctagacttttgt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20089287 302 + 128169293 TATTTTTAGGAGACT-AAAAAATTGGTGTAGCAAATTCAAAAAGTAATTTGTATAAAAATATAG-TATTTTAAGTT-AAAACTCAATAATGAACTCGGCAGATTACACTCGGCAGTGGTGAGAATGAAT----------------------AAATATTTCGGAATGC-A-TACAGATAATTTGgaaa-------aatgtggacagaatcattaagagacatggaaaatacagtgagaaagtgtagc---atgtgtttaattagtgttcttatcaaa----gaagggaac--tgggaagagacaatatgtgatggcattttgact-------------------gaaagttctccagacttttgt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670034 303 + 18371965 TATTTTTAGGAGACT--AAAAATTGGTGCAGCAAATTTGAAAAGTAATTTGTGCaaaaatatag-tcttttaaattaaaaactcaatgatgaactcagcagattagacacggccatggtgagagtgaat----------------------aaatatttcagaatgc-attacagataatttgaaaa-------aatgtggatagaatcaataagtgacatagaaaatacagagagaaagtgtagc---atgtgtttagtgagtgttctcatagag----gaagaggac--tgggaagagacagtctgtgatggcattttggct-------------------gaaagttctccagactttttt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2203984 304 - 3566421 TATTTTTAGGAGACT-AAAAAATTGGTGTAGCAAATTTGAAAAGTAATTTGTACaaaaacatag-tattttaaattcaaaactcaataatgaactcggcagattagacatggccatggtgagagtgaat----------------------aagtacttcagaatgc-atcacagataatttgaaaa-------aatgtggatagaatcattaagcgacatggaaaatacagtgagaaagtatagc---atgtgtttagtgagtgttctcatagac----gaagggaac--tgggaagagacaatatgggatggcattttggct-------------------gaaagttctccagacttttgt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400250 304 + 9267652 TATTTTTAGGAGACT-AAAAAATTGGTGTAGCAAATTTGAAAAGTAATTTGTACaaaaatatag-tattttaaattaaaaactcaataatgaactcggcagattagacatggccatggtgaaagtgaat----------------------aaatatttcagaatgc-attacagataatttgaaaa-------aatgtggatagaattattaagagacatggaaaatacagtgagaaagtatagc---atgtgtttaatgagtgttctcatagaa----ggagggaac--tgggaagagacaatatgtgatggcattttggtg-------------------gaaagttctccagacttttgt i aotNan1.NW_018514471v1 I 145 C 0 s otoGar3.GL873564 1647244 311 - 14340318 tgttttggggagaat-aagcaaaggacctaacaaattcgaaaactagtttgcacaaaaatatat-tattttagattaaagagtcaatgatgaacacaacagattagacacagttaagatgagagctaat---------------------aaaatatttcagaatga-attacagataatttgaaaagatgtagcatgtggacagactcat-aaaagacttggaagacagagtg-gaaagtgttat---ttgcatttaatgcatatcctgatagga----gggggaaatagtgggaaaggacattaactgaaggtattttgtgt-------------------gaaa-ttttctagactttttt i otoGar3.GL873564 C 0 I 109 s canFam3.chr18 4110687 355 + 55844845 TATCTTTAGGAGACT--GATaaatgccctagcaaatttgaaaattaagttatttaaaaatataa-ta-tttaagttaaaaaataaatgatggacctaacacatcagacaaagcaatg-caaaagttaacaaagtgcgacgtaagccaaagaaaatatttcagaatgcgattataggtaatttgagaagacacggtatttggatggaatcatcaga--atatagaggataatgtgagaaaaggttcccatctatatgtaatggatattctaatacaagaggaaaaaaaat--ggggaaaggacaatacttaaagatttttttaataaagttctctaggaaaaaaaaaagttatccaggcttttga i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I a score=998524.000000 s hg38.chr14_KI270725v1_random 127218 90 + 172810 aagacactaat-ccacatattcaaaaattctatgcatgctaagcaagctacagtggagataaacctacctcta------catatctcctagagaaat s panTro5.chr1 126709317 90 + 228573443 aagacactaat-ctgcatgttcaaaaattccatgcatgctaagcaagctacaatggagataaacctacaccta------tgtatctcctagagaaat i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689525 90 + 162613886 aagacactaat-ctgcatattcagaaattccatgcttgctaagcaagctacaatggagataaacctacaccta------tgtatctcctagagaaat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110526 90 + 126596 aagacactaaa-ctgcatattcaaaacttctatgcatgctatgcaagctacaatggagataaaactacatcta------catatctcctagataaat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697699 90 + 72422247 aagacactaat-ccgcatgttcaaaaattccatgcatgctaagcaagctacattggagataaacctacaccta------cgtatctcctagagaaat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149905 90 - 99891981 aagacactaat-ctgcatattcaagaattcaatgcttgctaagcaagctacagtggagataaacctacaccta------tgtatctcctagagaaat i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52380073 89 + 185818997 aagacactaat-ccacatattcaaaaactcaacgcatgctaagcaagttaca-tggagattaacctacaccta------agtatctcctagagaaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025823 89 - 192294377 aagacactaat-ccacatattcaaaaactcaacgcatgctaagcaagttaca-tggagattaacctacaccta------agtatctcctagagaaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372900 89 - 3123512 aagacactaat-ccacatattcaaaaactcaacgcatgctaagcaagttaca-tggagattaacctacaccta------agtatctcctagagaaat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7606548 89 - 10077455 aagacactcat-ccacatattcaaaaattcaacgcatgctaagcaagttaca-tggagattaacctacaccta------agtatctcctagagaaat i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 121544319 89 - 127223203 aagacactaat-ccacatattcaaaaattcaacgcatgctaagcaagttaca-tggagattaacttacaccta------agtatctcctagagaaat i chlSab2.chr21 C 0 I 474 s manLeu1.NW_012105809v1 676198 89 + 1799296 aagacactaat-ccacatattcaaaaattcaacacacgctaagtaagttaca-tggagattaacctacaccta------agtatctcctagagaaaT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5212565 89 - 6934359 aagacactaat-ccacatattcaaaaattcaacacatgctaagcaagttaca-tggaaattaacctacaccta------agtatctcctagagaaat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20089589 89 + 128169293 aagccactaat-ccacatattcaataattcaatgcatgctaagcaagctaca-tggagataaacctttaccta------agtatctcctagataagt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670337 89 + 18371965 aagccactaatcccacgta-tcaaaaattcaatgcatgctaagcaagctaca-tggagatgaaccttcaccta------agtatctcctagATAAGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2204288 89 - 3566421 acgccactaat-ccacatattcaataattcaatgcatgctaagcaagctaca-tggagatgaaccTTCAAGTA------AGTATCTCCTAGATAAGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400554 89 + 9267652 aagccactaat-ccacatattcaataattcaatgcatgctaagcaagctaca-tggagataaaccttcaccta------AGTATCGCCTAGATAAGT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1647664 94 - 14340318 aagaaacaggt-ctgcatattcaaaaatgcagttagt-cgtagcaagctata-ggaagataaatctgtacttaaatattaatatctcatagagaaac i otoGar3.GL873564 I 109 C 0 s canFam3.chr18 4111042 89 + 55844845 gggacactaat-ctgcatattaaaaaactcaatcaattcaagccaagatgta-ggaaaacaaggctacatctc------agtatctcatagtgaaat i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I a score=73074.000000 s hg38.chr14_KI270725v1_random 127308 9 + 172810 agtaaacaa s panTro5.chr1 126709407 9 + 228573443 agtaaacaa i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689615 9 + 162613886 agtaaacaa i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110616 9 + 126596 agtaaacag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697789 9 + 72422247 agtaaataa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44149995 9 - 99891981 agtaaacaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52380162 9 + 185818997 cgtaAGCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125025912 9 - 192294377 cgtaAGCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 372989 9 - 3123512 cgtaAGCAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7606637 9 - 10077455 tgtaaacaA i cerAty1.NW_012000909v1 C 0 C 0 s manLeu1.NW_012105809v1 676287 9 + 1799296 CATAAACAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5212654 9 - 6934359 cgtaaacaa i colAng1.NW_012115910v1 C 0 I 459 s calJac3.chr8 20089678 9 + 128169293 ggcaaacaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670426 9 + 18371965 GGATAACAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2204377 9 - 3566421 GGTAAACAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400643 9 + 9267652 GGTAAACAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1647758 9 - 14340318 tacaaataa i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4111131 9 + 55844845 tgaaaatga i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e chlSab2.chr21 121544408 474 - 127223203 I a score=6086.000000 s hg38.chr14_KI270725v1_random 127317 1 + 172810 t s panTro5.chr1 126709416 1 + 228573443 c i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689624 1 + 162613886 c i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110625 1 + 126596 t i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697798 1 + 72422247 t i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44150004 1 - 99891981 t i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52380171 1 + 185818997 T i rheMac8.chr3 C 0 I 451 s macFas5.chr3 125025921 1 - 192294377 T i macFas5.chr3 C 0 I 451 s macNem1.NW_012011522v1 372998 1 - 3123512 T i macNem1.NW_012011522v1 C 0 I 455 s cerAty1.NW_012000909v1 7606646 1 - 10077455 T i cerAty1.NW_012000909v1 C 0 I 460 s manLeu1.NW_012105809v1 676296 1 + 1799296 T i manLeu1.NW_012105809v1 C 0 I 449 s calJac3.chr8 20089687 1 + 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670435 1 + 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2204386 1 - 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400652 1 + 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1647767 1 - 14340318 c i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4111140 1 + 55844845 c i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e chlSab2.chr21 121544408 474 - 127223203 I a score=331676.000000 s hg38.chr14_KI270725v1_random 127318 90 + 172810 -----caggaagggaaaaatatttcaattagcactag---aaa--aatcaaattacctttaatcatattgaaatctg------------aaagcatgaaaggtaaaataaac s panTro5.chr1 126709417 91 + 228573443 -----gaggaagggaaaaatatttcaattagcactag---aaa--aatgaAATTACTTTTAATCATTTTGAAATCTG-----------AAAAAAATGAAAGGTAAGATAAAC i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689625 90 + 162613886 -----aagg-atggaaaaatatttcaattagcaccag---aaa--aatgaaatttcttttaatcatattgaaatctg-----------aaaaaaatgaaaggtaaaataaac i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110626 90 + 126596 -----caggaagggaaaaatatttcaatgagcactag---aaa--aatcaaattacctTTAATCATATTGAAATCTG------------AAAGCATGAAAGGTAAAATAAAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697799 90 + 72422247 -----caggaagggaaaaatatttcaattagcactag---aaa--aatcaaattacctttaatcatattgaaatctg------------aaagaatgaaaggtaaaataaac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44150005 90 - 99891981 -----cagaaagggaaaaatatttcaattagcactag---aaa--aatcaaaataccttaaatcatactgaAATCTG------------AAAGAGTGAAAGGTAAaataaac i nomLeu3.chr17 C 0 I 1806 s calJac3.chr8 20089688 86 + 128169293 -----cagcaagggacaaatattttaatgagcact-a---gaa--aatcaa---acctttaatcatatagaaatctg------------aaagaatggacggtaaaataaac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670436 90 + 18371965 -----CAGCAAGGGGCAGATATTTTAATGAGCACCAA---GAA--AATCCAATTACTTTTAATCATATTGAAATCTG------------AAAGAACGGATGGTAAAATAAAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2204387 90 - 3566421 -----CAGCAAGGGATAGATATTTTAATGAGCACCAG---GAA--AATCAAATTACTTTTAATCGTATTAAAATCTG------------AAAGAATGGATGGTTATATACAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400653 89 + 9267652 -----CAGCAAGGGACAGATATTTTAATGAGCACTAG---GAA--AATCAAATTACCTTAAGTCATATTG-AATCTG------------AAAGAATGGACGGTAAAATAAAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1647768 92 - 14340318 -----cataaagcagaaaatatttcgcatggggctagaaaaaa--aatcaaattgcctTTAATTGTCTTGAAATCTG------------AAAGAATGAAGGGTAAAA-ACAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4111141 109 + 55844845 aaggaagaaaagaaaaaaatactttcatcaggattag---gaaataatcaaattacctttaatcatacagcaacctgacttcctaattaaaccaatgaaaagtaaaatatac i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=472065.000000 s hg38.chr14_KI270725v1_random 127408 126 + 172810 aatattatttgttaagaataa--taatgccactctgaaattctcaaccaag-aaaaatattcatcaacctatgg---ctaaataaca----tatttagagacaaaaaacaaaacaccaccagcagaattccactaa s panTro5.chr1 126709508 126 + 228573443 AATATTATTTGTTAAGAATAA--TAATGCCATTCTGAATTTCTAAATGAAG-AAAAATGTTCATCAACCTATGG---CTAAATAACA----TATTTGGGGATAAAAAACAAAACGCCACCAGCAGAATTCCACTAA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689715 126 + 162613886 aatattatttgttaagaataa--taatgccattctgaatttctaaatgaag-aaaaatattcatcaacctatgg---ctaattaaca----tatttagagataaaaaacaaaacgcctccagcagaattccactga i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110716 126 + 126596 AATATTATTTGTTaagaataa--taatgccattctgaaattctcaaccaag-aaaaatattcttcaacctatgg---ctaaataaca----tatttagagacaaaaaacaaaacgccaccagcagaaatccactaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5697889 125 + 72422247 aatattatttgttaagaataa--taatgccattctgaaattctcaaccaag-aaaaatattcatcaacctatgg---ataaataaca----tatttagagacaaaaaa-aacacgccaccagcagaattccactaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44151901 126 - 99891981 AATATTTAAAAAaaagaataa--taatgccattctgagattctcaaccatg-aaaaatattcatcaacctatgg---ctaaataaaa----tatttacagacaaaaaccaaaatgccaccagcagaattccactaa i nomLeu3.chr17 I 1806 C 0 s calJac3.chr8 20089774 124 + 128169293 aatattatttgctaagaataa--taatgccattttgaaattctcaactaagaaaaaatattaatcaacctatgg---ctaaataaaa----tacttagagacaagaaacaaaatgccaccagcagaactccac--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670526 124 + 18371965 ---ATTATTTGCTATGAATaa--taacgtcattttgaaattctcaactaagaaaaaatattaatcaacctatga---ctaaataaaa----tacttagagacaagaaacaaaatgccaccagcagaacttcactaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2204477 127 - 3566421 AATATTATTTGCTAAGAATAA--TAATGCCATTTTGAAATTCTCAACCAAGAAAAAATATTAATCAACCTATGG---CTAAATAAAC----TACTTAGAGACAAGAAACAAAATGCCACCAGCAGAACTCCACTAA i cebCap1.NW_016107540v1 C 0 I 706 s aotNan1.NW_018514471v1 7400742 127 + 9267652 AATATTATTTGCTAAGAATAA--TAATGCCATTTTGAAATTCTCAACTAAGAAAAAATATTAATCAATCTATGG---CTAAATAAAA----TACTTAGAGACAAGAAACAAAATGCCACTAGCGGAACTCCACTAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1647860 125 - 14340318 AATGTAATTtgttgggagtaaataaatgccatcttagaattctcaaccaag-aaaaatattcat-attttatgg---ccaaataagaacattttttaga------aaacaaaataagaccagcagaacaccactTC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4111250 123 + 55844845 aatatcatgggctgaaagaaaccaaatgtcattataga--ccccaaccaag-caaaatatccactggaccaggatccccccctaaaa-----atttaga-----ctaacagaatgccatcagcagaatcacagtta i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=25133.000000 s hg38.chr14_KI270725v1_random 127534 7 + 172810 agaaact s panTro5.chr1 126709634 7 + 228573443 AGAAACT i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689841 7 + 162613886 agaaact i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110842 7 + 126596 ggaaact i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698014 7 + 72422247 agaaact i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152027 7 - 99891981 agaaact i nomLeu3.chr17 C 0 C 0 s saiBol1.JH378145 17670650 7 + 18371965 agaaact i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205310 7 - 3566421 AGAAACT i cebCap1.NW_016107540v1 I 706 C 0 s otoGar3.GL873564 1647985 7 - 14340318 AGAAACT i otoGar3.GL873564 C 0 I 1145 s canFam3.chr18 4111373 6 + 55844845 -agaact i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e aotNan1.NW_018514471v1 7400869 0 + 9267652 C e calJac3.chr8 20089898 0 + 128169293 C e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=645918.000000 s hg38.chr14_KI270725v1_random 127541 183 + 172810 aaaaagaaactctga--aaacatgcttcagaaagattgaagttctgaaatcaaagaatgaacacagagaaaaatatattgtaaacatacagatagatctaaataaaA---AATTAGGTGTTGAAACAAAAAGATATTTAAAAT--------------TAGATAAGCACTGCAATATGTATGTTAGGAAGCAAATTATTAGGG s panTro5.chr1 126709641 182 + 228573443 ACAGAGAAACTCTGA--AAATATGCTTCAGAAAGGTTGAAGTTCTGAAATCAAAGAATGAACAGAGAGTAAAATATATTGCAAACATACAGATAGAAC-AAATAAGA---AACTGTGTTTTGAAACAAAAATATATTTAAAAT--------------TAGATAAGCACTGCAATATGTATGATAAAAAGAAAATTATTAGGG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74689848 182 + 162613886 acagagaaactctga--aaatgtgcttcagaaaggttgaagttctgaaatcaaagaatgaacagagagtaaaatatattgcaaacatacagataGAAC-AAATAAGA---AACTGGGTTTTGAAACAAAAATATATTTAAAAT--------------TAGATGAGCACTGCAATGTGTATGATAAAAAGAAAATTATTAGGA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 110849 183 + 126596 agaaagaaactctga--aaacatgcttcagaaagattgaagttctgaaatcaaagaatgaacacagaggaaaatatattgtaaacatacagatagatctaaacaaaA---ACTTAGGTGTTGAAACAAAAGGATATTTAAAAT--------------TAGATAAGCACTGCAATATGTATGTTAGGAAGCAAATTATTAGGG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698021 182 + 72422247 aaagagaatctctga--aaacatgcttcagagaggttgaagttctgaaatcaaagaatgaacacagagcaaaatatattgtaaacatacagatagatt-aaataaaA---AGTTAGGTGTTGAAACaaaaagatatttaaaat--------------tagataagcactgcaatatgtatgttaggaagcaaattattaggg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152034 183 - 99891981 aaaaaggaattctga--aaagatgcttcagaaaggttgaagttctgaaatcaaagaatgaacaaagagcaaaatatattgtaaacatacggatagatctaaataaaa---aattaagtgctgaaacaaAAAGATATTTAAAAT--------------TAGATAAGCACCGCAATATGTATGTTGGGAAGCAAATTATTAAGG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20089898 180 + 128169293 -gacagaaa--ctga--aaagatgcttcagaaaggttgaagttctgaaatgaaagaacgaacaaagaacaaaaccgattgtaaatatacggatagatctaaataaaA---AATTAGATGTTGAAACTAAAAGATATTTAAAAT--------------TAGATAAGCACTGCAATATGTATGTTGAGAAGGAAATTATTACAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670657 180 + 18371965 aaaaagaaa--ctga--aaagatatttcagaaaggttgaagttctgaaatgaaagaatgaacaaagagcagaacagattgtaaatatacagatagatctaaataaaA---AATCAGATGTTGTAACCAAAA-ATATTTAAAAT--------------TAGATAAGCACTGCAATATGTACGTTGAGAAATAAATTACTAGGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205317 180 - 3566421 AAAAAGAAA--CTGA--AAAGATGCTTCAG-AAGGTTGAAGTTCTGAAATGAAAGAATGAACAAAGAGCAAACCAAATTGTAAATATACAGATAGACCTAAATAAAA---AATCAGACGTTGTAACAAAAAAATATTTAAAAT--------------TAGATAAGCACTGCAATATGTATGTTGAGAAGTAAATTATTAGGG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7400869 177 + 9267652 ----AGAAG--CTGA--AAAGATGCTTCAGAAAGGTTGAAGTTCTGAAATGAAAGAATGAATAAAGAGCAAAACAGATTGTAAATATACAGATAGATTTAAATAAAA---AATTAGATGTTGAAACAAAAAGATATTTAAAAT--------------TAGATAAGCACTGCAATATGTATGTTGAGAAGTAAATTATTCTGG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4111379 201 + 55844845 ccaaagaaactctgaacagatatacttcaaagaagtggaatttttgaattgaaagaatgaataaagagcaaaatattttgt-aatatatgaatagatcgaaatcaaaattATTTAGGTGTTAAAATTAAAAGATATTTAAAATGGGTACACAAAAAATGGGTACACATTATATTATATACATCAGAACTTTGATTAATTAGG i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=147981.000000 s hg38.chr14_KI270725v1_random 127724 46 + 172810 CTGAAGTATTCAAAGACCCCTTAATTGTCTGACAAGAGCAGAAA----GG s panTro5.chr1 126709823 50 + 228573443 CTGAAGTATTCAAAGAACCCTTAATTGTCTGACAAGAGCAGAAAAGTGAG i panTro5.chr1 C 0 C 0 s panPan2.chr7 74690030 50 + 162613886 CTGAAGTATTCAAAGAACCCTTAATTGTCTGACAAGAGCAGAAAAGTGAG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 111032 46 + 126596 CTGAAGTATTCAAAGACCCCTTAATTGTCTGACAAGAGCAGAAA----GG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698203 50 + 72422247 ctgaagtattcaaagaccccttaattgtctgacaagagcagaaaggtgag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152217 50 - 99891981 CTGAAGTATTCAAAGACCCCTTAATTGTCCGACAAGAGCAGAAAGGTAAG i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090078 45 + 128169293 CTGAAGTATT-AAAGATCCCTTAATTGCCTGGCCAGAGCAAAAAGG---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670837 46 + 18371965 CTGAAGTATTCAAAGATCCCTTAATTGCCTGACCAGAGCAAAAAGG---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205497 46 - 3566421 CTGAAGCATTCAAAGATCCCTGAATTGCCTGACAAGAGCAAAAAGG---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7401046 46 + 9267652 CTGAAGTATTCAAAGATCCCTTAATTGCCTGACCAGAGCAAAAAGG---- i aotNan1.NW_018514471v1 C 0 I 39 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=6552.000000 s hg38.chr14_KI270725v1_random 127770 2 + 172810 TA s panTro5.chr1 126709873 2 + 228573443 TA i panTro5.chr1 C 0 C 0 s panPan2.chr7 74690080 2 + 162613886 TA i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000522v1 111078 2 + 126596 TA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698253 2 + 72422247 ta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152267 2 - 99891981 TA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090123 2 + 128169293 TA i calJac3.chr8 C 0 I 8 s saiBol1.JH378145 17670883 2 + 18371965 TA i saiBol1.JH378145 C 0 I 8 s cebCap1.NW_016107540v1 2205543 2 - 3566421 TA i cebCap1.NW_016107540v1 C 0 I 11 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=31497.000000 s hg38.chr14_KI270725v1_random 127772 25 + 172810 TGACTTTGCAAtttttttttttttt s panTro5.chr1 126709875 25 + 228573443 TGACTTTGCAACTCTTTTTCTTTTT i panTro5.chr1 C 0 I 54727 s panPan2.chr7 74690082 25 + 162613886 TGACTTTGCAACTCTTTTTCTTTTT i panPan2.chr7 C 0 N 0 s gorGor5.CYUI01000522v1 111080 25 + 126596 TGACTTTGCAACTCCtttttttttt i gorGor5.CYUI01000522v1 C 0 I 5 s ponAbe2.chrUn 5698255 25 + 72422247 tgactttgcaacttttttttttttt i ponAbe2.chrUn C 0 I 6 s nomLeu3.chr17 44152269 25 - 99891981 TGACTTTGCAACttttttttttttt i nomLeu3.chr17 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e saiBol1.JH378145 17670885 8 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e cebCap1.NW_016107540v1 2205545 11 - 3566421 I e calJac3.chr8 20090125 8 + 128169293 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I a score=151503.000000 s hg38.chr14_KI270725v1_random 127797 290 + 172810 tttgagaaggagtctcactcactctttctcccaggctggagtgcggtggcgccatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagcggggattacagccacgtgccaccatgcctggctaatttttgtatttttagtatagacggggtttcaccatgttggtcaggctagtctccaactcctgacctcgtgatccacacgcctcggcctcctgaagtgttgagattacaggtgtgagccactgcgcgcgaccGAC s gorGor5.CYUI01000522v1 111110 290 + 126596 tttgagaaggagtctcactcactctttctcccaggctggagtgcagtggcgtcatctccgctcactgcaacctctgtcccccagattcaagcaattctcctgcctcagcctcctgagtagcggggattacagccgcgtgccatcatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctagtctccaactcctgacctcgtgatccacaagcctcggcctcccgaagtgttgagattacaggcgtgagccactgcgcgcgaccGAC i gorGor5.CYUI01000522v1 I 5 C 0 s ponAbe2.chrUn 5698286 290 + 72422247 tttgagaagaagtctcactcactgtttcgcccaggctggagtgcagtggcgccatctcggctcactgcaacccctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagcggggattacagccgcgtgccaccatgcctggctaatttttgtattttcagtagagacagggtttcaccatgttggtcaggctagtctccaactcctgacctcgtgatccacacgcctcggcctcccgaagtgttgagattacaggcgtgagccactgcgcgcgaccgac i ponAbe2.chrUn I 6 C 0 s nomLeu3.chr17 44152294 290 - 99891981 tttgagacggagtctcactcactctgtcgcccagactggagtgcagtggcatgatctcggctcactgcaacctctgtctcccaggttcaagcaattctcctccctcagcctcttgagtagcagggattacagccgcgtgccaccatgcccggctaatttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtctccaactcctgacctcgtgatccacatgcctcagcctccagaagtgctgagattacaggcgtgagccactgcgcgtgaccGAC i nomLeu3.chr17 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e saiBol1.JH378145 17670885 8 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e cebCap1.NW_016107540v1 2205545 11 - 3566421 I e calJac3.chr8 20090125 8 + 128169293 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=910.000000 s hg38.chr14_KI270725v1_random 128087 1 + 172810 T s gorGor5.CYUI01000522v1 111400 1 + 126596 T i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698576 1 + 72422247 t i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152584 1 - 99891981 T i nomLeu3.chr17 C 0 C 0 s saiBol1.JH378145 17670893 1 + 18371965 T i saiBol1.JH378145 I 8 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e cebCap1.NW_016107540v1 2205545 11 - 3566421 I e calJac3.chr8 20090125 8 + 128169293 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=932.000000 s hg38.chr14_KI270725v1_random 128088 2 + 172810 TT s gorGor5.CYUI01000522v1 111401 2 + 126596 TT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698577 2 + 72422247 tt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152585 2 - 99891981 TA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090133 2 + 128169293 TT i calJac3.chr8 I 8 C 0 s saiBol1.JH378145 17670894 2 + 18371965 TG i saiBol1.JH378145 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e cebCap1.NW_016107540v1 2205545 11 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=32763.000000 s hg38.chr14_KI270725v1_random 128090 23 + 172810 GGAACTTTAATAAATTGACTGGA s gorGor5.CYUI01000522v1 111403 23 + 126596 GGAACTTTAATAAATTGACTGGA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698579 23 + 72422247 ggaactttaataaattcactgga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152587 23 - 99891981 GGAACTTTAACAAATTCACTGGA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090135 23 + 128169293 GGGACTTTAACAAATTCAGTCGG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670896 23 + 18371965 GGAACTTAAACAAATTCAGTCGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205556 23 - 3566421 GGAACTTTAACAAATTCAGTCGG i cebCap1.NW_016107540v1 I 11 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111580 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=6093.000000 s hg38.chr14_KI270725v1_random 128113 3 + 172810 CAT s gorGor5.CYUI01000522v1 111426 3 + 126596 CAT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698602 3 + 72422247 cat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152610 3 - 99891981 CAT i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090158 3 + 128169293 CAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670919 3 + 18371965 CAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205579 3 - 3566421 CAC i cebCap1.NW_016107540v1 C 0 C 0 s canFam3.chr18 4111580 3 + 55844845 CAT i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401092 39 + 9267652 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=230913.000000 s hg38.chr14_KI270725v1_random 128116 111 + 172810 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AATAAAAGTCATAATTTTAAAACAAGAA-TACAGAAACTGATAGGAGAAAATGAGA-CAGtatatatatatatatat s gorGor5.CYUI01000522v1 111429 112 + 126596 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AATAAAAGTCATAATTTTAAAGCAAGAA-GACAGAAAGTGATAGGAGAAAATGAGACCCatatatatatatatatat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698605 105 + 72422247 tatgcatttctctgttgtagctatgaaaacaataaa---aataaaagtcataatttaaaaacaagaa-gacagaaactgataggagaaaatgagg-cattatatatatat------ i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152613 105 - 99891981 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AATAAAAGTCATAATTTAAAAACAAGAA-GAC--AAACTAATAGGAGAAAATGAGA-Cataatatatatatat---- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090161 108 + 128169293 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AACAAAAGTCATAATTTAAAAACAAG----ACAGAAGCTGATAGGAGAAAATGAGA-CATCatatatacatttatat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17670922 106 + 18371965 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AATAAAAGTCATAATTGAAAAACAAG----ACAAAAACTGATAGGAGAAAATGAGG-CAT--tatatatatttatat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205582 105 - 3566421 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AATTAAAGTCATAATTTAAAAACAAG----ACAGAAACTGATAGGAGAAAATGAGA-CA---TGTATATATTTATAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7401131 108 + 9267652 TATGCATTTCTCTGTTGTATCTATGAAAACAATAAA---AATAAAAGCCATAATTTAAAAACAAG----ACAGAAACTGATAGGAGAAAATGAGA-CATtatatatatatgtatat i aotNan1.NW_018514471v1 I 39 I 1227 s canFam3.chr18 4111583 115 + 55844845 TGTGCATTTTTCTACTCTATCCATATAAATAGTAGAAACAATAAAAGTAATAATATAACAACAAAAATGGGGGGAAATAAAAATAAAAAGGGGGA-AAATATAAAAAAGGAAACAT i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=-10133.000000 s hg38.chr14_KI270725v1_random 128227 3 + 172810 at------------------a- s gorGor5.CYUI01000522v1 111541 21 + 126596 atatatatatatatataCACA- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698710 1 + 72422247 --------------------a- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152718 1 - 99891981 --------------------a- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090269 3 + 128169293 ------------------gta- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17671028 3 + 18371965 ------------------gta- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2205687 3 - 3566421 ------------------GTA- i cebCap1.NW_016107540v1 C 0 I 1200 s canFam3.chr18 4111698 2 + 55844845 --------------------AT i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401239 1227 + 9267652 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=1659.000000 s hg38.chr14_KI270725v1_random 128230 2 + 172810 CA s gorGor5.CYUI01000522v1 111562 2 + 126596 CA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698711 2 + 72422247 ca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152719 2 - 99891981 ta i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090272 2 + 128169293 ta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17671031 2 + 18371965 ta i saiBol1.JH378145 C 0 I 1189 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4111700 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401239 1227 + 9267652 I e cebCap1.NW_016107540v1 2205690 1200 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=137428.000000 s hg38.chr14_KI270725v1_random 128232 290 + 172810 CACAACAAATTAATAATACAAAATTAAGTATAAATG------atcaaagatta------acttaaacctaa-gtagac---aat-gtt---tttgttaaaatacaaagattggca-aaa---------------------tttaaaacatctgtc------tctatcatagttacaagagaggcaactaatatataaatttacaggaactttgaagtttgaacaatacagatactgtgtatatatgatatacataca-aacatactacatgaatataattttttaaaaagttgctat-------------gtagacaaaacagaatgtaagtta--gaaatatttattaaaata---- s gorGor5.CYUI01000522v1 111564 289 + 126596 CACAACAAGTTAATAATACAAAATTAAGTATAAATG------ATCAAAGATTA------ACTTAAACCTAA-GTAGAC---AAT-GTT---TTTGTTAAAATACAAAGATTGGCA-AAA---------------------TTTAAAACATCCGTC------TCTATCATAGTTACAAG-GAGGCAACTAATATATAAATTTACAGAAACTTTGAAGTTCAAACAATACACATACTGTGTATATATGATATACTTACA-AACATACTACATGAATATAATTTTTTAAAAAGTTGCTAT-------------GTAGACATAATAGAATGTAAGTTA--GAAACATTTATTAAAATA---- i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5698713 288 + 72422247 cacaacaaattaataaaac-aaattaagtataaatg------atcaaagatta------acttaaacctaa-gtagat---aat-gtt---tttgttaaaatacaaagattagca-aaa----------------------ttaaaaaatccgtc------tctatcatacttacaagagaggcaactaatacataaattttcagaaactttgaagttcaaacaatatagatagtatgtatatatgatatacataca-aacataccacgtgaatacaattttttaaaaagtcgctat-------------gtagacaaaatagaatgtaagtta--gaaacatttattaaaata---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44152721 290 - 99891981 taCAACAAATGAA------AAAACAAAGtataaatg------atcaagtataaatgtctacttaaacataa-gtagac---aat-gtt---tttgttaaaatacaaagattggca-aca---------------------ttaaaaaaattcacc------tctatcatagttacaatagcggcaactaatatataaatttacagaaactttgaagttcaaacaatacagatactgtgtatatatgatatacatata-aacatactacatgaatataattttttaaaaagttgctat-------------gtagacaaaatagaatgtaaatta--gaaacatttattaaaata---- i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20090274 262 + 128169293 -----cattttaatttgcatatattttgtttgtat-----------acattta------atttatatataatatatacataaat-gtttaatttgtataaattttatgatttgtatata---------------------tttaatatgtatatTTTTTAATTTGTtatgtatatatg---------gaatatatatatt------------------------atatatatattatgtatatggaatatatatacataACAAATTAAAAAACCCAAAATTAACTATAAGTGATCA---------------AAGATGAACttaaatgtaagtagacaaagtttttgttaaaata---- i calJac3.chr8 C 0 I 919 s canFam3.chr18 4111700 273 + 55844845 ----------------------TTTAAGTATGGACATAAAGTATCAAAGATCA------CCTTACATATAA-ATAGAC---AATAAGT---TTCCTTAAGATACCAAGATTGACA-GAAGAGGTGTTGCTTTGTTTTGTTTTTAa----tccatt------tctatgatggttacaaa--tgactaccaagatataagattacagaaagattgaaattcaaataatagg-----------------------------aacatgctacgcaaatgcaatattttga-aagttgatattgttatagcaatgataagcaaaatagaatttaagtaa--aag-----tattaatatgaggg i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e saiBol1.JH378145 17671033 1189 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401239 1227 + 9267652 I e cebCap1.NW_016107540v1 2205690 1200 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=237644.000000 s hg38.chr14_KI270725v1_random 128522 475 + 172810 agttagtctaaccagtgtgataaaagttttaagttattaagaagatgtgatgacttaaatgtgcgttagcctgataCATACATATATATATacacacaaaccacaca--ctctctcacaaccacagacatacacGTATTTAGagagagagtcaaattatataaagcaaaaatatcaga-----aagtagaaatggataagcccccaaat-attatagacatttcaaacacacatctttcaataatagataaaagaaaaaattaaaagagtaagttttaaaagaagctagtggattttaaaaagggcaaatattatataaggaacatgaatattatagttcatgttattttcttgttcatacagaatacttacaaaaattaacattttctagaccataccacaaattcaaacaattttcacggaaataacgtgacacagaatatacttcctaaacaaacagcaatgaaggcagatatcaataca s gorGor5.CYUI01000522v1 111853 481 + 126596 AGTTAGTCTAACCTGTGTGATAAAAGTTTTAAGTTATTAAGAAGATGTGATGACTTAAATGTGCATTAGCCTGATacatacatatatatatacacacaaaccacacactctctctcacacacacagacacacacaTATTTAGagagagagtcaaattatataaagcaaaaatatcagaaa-gtaagtagaaatggataagcccccaaat-attatagacatttcaaacacacgtctttcagtaatagataaaagaaaaaattaaaagagtaagttttaaaggaagctagtggattttaaaaagggcaaatattatataaggaatatgaatattataattcatgttattttcatgttcatacagaatacttacaaaaattaacattttctagaccataccacaaattcaaacaattttcacggaaataacgtgacacagaatatatttcctaaacaaacagcaatgaaggcagatatcaataca i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699001 477 + 72422247 agttagtctaaccagtgtgataaaagttttaagttattaagaagatgtgatgacttaaatgtgcatTAGCCTGATacatatatacatatatacacacacactacacactctctctcacacac----acacacacGTATTTAGagagagagtcaaattatataaagcaaaaatatcagaaa-gtaagtagaaatggataagcccccaaatcaatatagacatttcaaacacacatctttcagtaatagatacaagaaaaaattaaaagagtaagttttaaaagaagctagtggattttaaaaa-ggcaaatgttatataaggaacatgaatattataattcatgtcattttcatgttcatacagaatacttacaaaaattaacattttctagaccataccacaaattcaaacaattttcacggaaataacgtgacacagaatgtatttcctaaacaaacagcaatgaaggtagatagcaataca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153011 459 - 99891981 agttagtctaaccagtgtgataaaagttttaagttattaagaagatgtgatgacttaaatgtgcattagcctgacaCATATATACATACATacacacaca---------------cacacac----acacacacaTATTT--agagagagtcaaattatat--agcaaaaatatcagaaa-gtaagtagaaatggataagcccccaaatcattatagacatctcaaacacacatctttcagtaatagataaatgaaaaaatttaaagagtaagttttaaaagaagctagtggattttaaaaagggcaaatgttatatatggagcacgaatattataattaatgttattttcatgttcatacagaatacttacaaaaattaacattttctagaccataccacaaattcaaacaattttcgcagaaataacatgacacagaatatatttcctgaacaaacagcaatcaaggtagatatcaataca i nomLeu3.chr17 C 0 C 0 s canFam3.chr18 4111973 266 + 55844845 aattattct-----ttattataaaagttttgatttattgggaa-atgtgatgatttatatgtgtattagccttacatatatgtatat---------------------------------------------------------------ccaacctatataaataaaaaatatcagaactacaaagagaaatggctaaa-tcccaaatcactgtagacatttcaaacatata--tttcagtCATAG----GAGAAAAAATTAAAATATTGAGCACTGAAAGGAGCCCTTTGA---------------------------------------------------------------------------TTAACAAAATTAA-----TCAA----ATACCATGCATTGGAA----------AGGAATAGC--------------------------AACAACA--------------------- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e saiBol1.JH378145 17671033 1189 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401239 1227 + 9267652 I e cebCap1.NW_016107540v1 2205690 1200 - 3566421 I e calJac3.chr8 20090536 919 + 128169293 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=7282.000000 s hg38.chr14_KI270725v1_random 128997 7 + 172810 aaaacga s gorGor5.CYUI01000522v1 112334 7 + 126596 aaaatga i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699478 7 + 72422247 aaaaaga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153470 7 - 99891981 aaaaaga i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091455 7 + 128169293 AGAAAGA i calJac3.chr8 I 919 C 0 s canFam3.chr18 4112239 7 + 55844845 AAAAAga i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e saiBol1.JH378145 17671033 1189 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401239 1227 + 9267652 I e cebCap1.NW_016107540v1 2205690 1200 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=20783.000000 s hg38.chr14_KI270725v1_random 129004 18 + 172810 aagctagaaaCA-----TAAGTC s gorGor5.CYUI01000522v1 112341 18 + 126596 aagttagaaaCA-----TAAGTG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699485 18 + 72422247 aagctagaaaCA-----TAAGTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153477 19 - 99891981 aaactagaaaCAT----TAAGTC i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091462 23 + 128169293 AAGCTAGAAACATCACATCAGTC i calJac3.chr8 C 0 I 12 s saiBol1.JH378145 17672222 23 + 18371965 AAGCTAGAAGCATCACATCGGTC i saiBol1.JH378145 I 1189 I 12 s canFam3.chr18 4112246 18 + 55844845 aaactagaaaaa-----taagtc i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7401239 1227 + 9267652 I e cebCap1.NW_016107540v1 2205690 1200 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=381589.000000 s hg38.chr14_KI270725v1_random 129022 188 + 172810 -TAATAATATTGGTTGGAAGCTATTTTAATGA--ATATTGAAATATTTTAAAGGTGAATAGTCC---------------------ATACAAATAAACCAAACACTTTTTTAAGGCCACTAAGATGCATGTGTAATGTGTAATGCCTCCTTTTATAAGGAGTCA-ATCTGTAACATCACCTGGGCTATTTGACAACTGCAAAGTGAATGTGAGA s gorGor5.CYUI01000522v1 112359 188 + 126596 -TAATAATATTGGTTGGAAGCTGTTTTAATGA--ATATTGAAATATTTTAAAGTTGAATAGTCA---------------------ATACAAATAAACCAAACACTTTTGTAAGGCCACTAAGATGCATGTGTAATGTGTAATGCCTCCTTTTATAAGGAGTAA-ATCTGTAACATCACCTGGGCTATTTGACAACTGCAAAGTGAATGTgaga i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699503 180 + 72422247 -TAATAATATTGGTTGGAAGCTATTTTAATGA--ATATTGAAATATTTTAAAGGTGAATAGTCA---------------------ATACAAAT-----GAACACTTTTGAAAGGCCACTAAGATGCATGTGTAATGTGTAATGCCTCCTTTTATAAGGAGTAA-ATCTGTAACATCACCTGGGCTATTTGACAACTGCAAAGTGAATGTG--- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153496 188 - 99891981 -TAATAATATTGGTTGGAAGCTATTTTAATGA--ATATTGAAATATTTTAAAGGTGAATAGTCA---------------------ATACAAATGAACCAAACACTTTTGTAAGGCCACTAAGATGCATGTGTAATGTGTAATGCCTCCTTTTATAAGGAGTAA-ATCTGTAACATCACCTGGGCTATTTGACAACTGCAAAGTGAATGTAAGA i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091497 185 + 128169293 -TAATAGTATGGGTTAGAAGCCATTTTAATGA--ATAGTGCAATATTTTAAAGGTGAATATTTA-----------------ATGCATACAAATGAACCAAACACTTGTGTAACGCCACTAAGATGCATTTGTGATACATAATGC-------TATAAGCAGTAA-ATCTGCAACATCACTTGGGCTGCTCCACAACTACAAAGTGAATATGAGA i calJac3.chr8 I 12 I 95 s saiBol1.JH378145 17672257 177 + 18371965 -TAATAACATGGGCTAGAAGCGATGTTAATGA--ATGCTGCAATATTTTAAAGGTGAATAATGA-----------------ATGCATACAAATGAACCAAACACTTGTGTAACGCCACTAAGATGCATGTGTGATGCGTAATGCCTCCTTTTATAAGCGGTAA-ATCTGCAACATCACTTGGGCTGTTCCACAACTAC--------------- i saiBol1.JH378145 I 12 I 1 s cebCap1.NW_016107540v1 2206890 192 - 3566421 -TAATAATATGGGCTAGAAGCCATTTTAATGA--ATGGTGCAATATTTTAAAGGTGAATATTTA-----------------ATGCATACAAATGAACCAAACACTTGTGTAACGCCACTAAGATGCATGTGTGATGCATAATGCCTCCTTTTATAAGTAGTAA-ATCTGCAACATCACTTGGGCTGTTCCACAACTACAAAGTGAATGTGAGA i cebCap1.NW_016107540v1 I 1200 I 460 s aotNan1.NW_018514471v1 7402466 192 + 9267652 -taataatatgggtTAGAAGCCATTTTAATGA--ATAGTGCAATATTTTAAAGGTGAATATTTA-----------------ATGCATACAAATGAACCAAACACTTGTGTAATGCCACTAAGATGCATGTGTGATGCGTAATGCCTCCTTTTATATGCGGTTA-ATCTGCAACATCACTTGGGCTGTTCCACAACTACAAAGTGAATGTGAGA i aotNan1.NW_018514471v1 I 1227 I 29 s canFam3.chr18 4112264 180 + 55844845 taaatgatctgggtca-aagacatgataatgaatatattacaatatatctcagttaaataatcatgaaaataaacggctgtaaaaaaaaaaagaaaagaaacggctgtataatgcagcaaaaata--------------------------tgtaaagagaaacatttctaacattaattgggctactt-agaaataaaaaatgaata----- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=58699.000000 s hg38.chr14_KI270725v1_random 129210 62 + 172810 AGGAGAGAAACAGTGagagagagagagagag-aaaaccagtaaa------ataaagaatgaaggagata s gorGor5.CYUI01000522v1 112547 68 + 126596 aggagagaaacagtgagagagagagagagaT-AAAACCAGTAAAATAAACATAAAGAATGAAGGAGGTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699683 62 + 72422247 AGGAGAGAAACGGT------GAGAGAGACAT-AAAACCagtaaaataaacataaagaatgaaggaaata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153684 66 - 99891981 AGGAGAGAAACAGT--GAGAGAGAGagagat-aaaaccactaaaataaacataaagaatgaacgaaata i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091777 65 + 128169293 gagagagagagagagagagagagagagagagaAATACCAGTAAAACAAGCAT----AATGAAGGAAATA i calJac3.chr8 I 95 C 0 s saiBol1.JH378145 17672435 32 + 18371965 gagagagagagagagagagagagagagagag-------------------------------------a i saiBol1.JH378145 I 1 C 0 s aotNan1.NW_018514471v1 7402687 64 + 9267652 GGgagagagagagagagagaaagagagagag-aATACCAGTAAAACAAACAT----AATGAAGGAAATA i aotNan1.NW_018514471v1 I 29 C 0 s canFam3.chr18 4112444 42 + 55844845 ---------------aatgagaaagagagaa------cagtata------atatagaataaggaaaata i canFam3.chr18 C 0 I 207 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=2100.000000 s hg38.chr14_KI270725v1_random 129272 1 + 172810 g s gorGor5.CYUI01000522v1 112615 1 + 126596 g i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699745 1 + 72422247 g i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153750 1 - 99891981 g i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091842 1 + 128169293 G i calJac3.chr8 C 0 I 4 s saiBol1.JH378145 17672467 1 + 18371965 g i saiBol1.JH378145 C 0 I 4 s aotNan1.NW_018514471v1 7402751 1 + 9267652 G i aotNan1.NW_018514471v1 C 0 I 26 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4112486 207 + 55844845 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=14686.000000 s hg38.chr14_KI270725v1_random 129273 19 + 172810 ccaggcgccatggttcact s gorGor5.CYUI01000522v1 112616 19 + 126596 ccaggcgccattgttcacg i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699746 19 + 72422247 ccaggcgccatggttcacg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153751 19 - 99891981 ccaggcgccatggttcatg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091847 19 + 128169293 ccggaaacagtggctcatc i calJac3.chr8 I 4 I 3 s saiBol1.JH378145 17672472 19 + 18371965 ccgggcacagtgtctcatc i saiBol1.JH378145 I 4 I 3 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4112486 207 + 55844845 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7402752 26 + 9267652 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=344023.000000 s hg38.chr14_KI270725v1_random 129292 248 + 172810 cctgtaatgccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcgagaccagcctggtctaacatggtgaaacccactatctactaaatataccaaaattagcctggcatggtggcatgcctctgtaatcccagctactcgggaggctgaggtgggagaattgcttgaacgtggggggtggaaattgcagtgagtagagatcacgcgactgcactccagcttgggcgacagag s gorGor5.CYUI01000522v1 112635 248 + 126596 cctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggtcaaacatggtgaaacccactctctactaaatatacaaaaattagcctggcaaggtggcatgcatctgtaatcccagctactctggaggctgaggtgggagaattgcttgaacgtggggggtggaagttgcagtaagtagagatcacgcgactgcactccagcttgggtgacagag i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5699765 248 + 72422247 cctgtaatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagactagcctggtccaacatggtgaaacccactctctactaaatatacaaaaattagcctggcatggtgacatgcacctgtaatcccagctactcgggaggctgaggtgggagaattgcttgaacgtgggggctggaggttgcagtgagttgagagtacgccactacactccagcttgtgcaacagag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44153770 248 - 99891981 cctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggtccaatatggtgaaacccgctttctactaaagatacaaaaattagccttgtgtggtggcatgcacctgtaatcccagctactggagacgctgaggtggtagaattgcttaaatctgggaggtggaggttgcagtgagtagagatcacgccactgcactcaagcttgggcgacagag i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20091869 248 + 128169293 cctgtaataccagcactttgggaggctgaggctggcagatcacttgaagtctggagttcgagactagcctcgttcaacatggtgaaactctgcctctacgaaaaatacaaaatttagccaggcgtggtggtgcaggcctgtaatcccagctactcaggaggctgagggaagagaatcgtttcaacccaggaggcagaggttgctctgagccaagatcacaccactgcactccagcctgggagacagag i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 17672494 205 + 18371965 cctgtaacaccagcactttgggaggccg-ggcaggcagatcacttgaagtcaggagttcgagactagcctagttcaacatggtgaaactctgcctctactaaaaatacaaaatttagccaggcgtagtggcacaggcctg------------------------------------------aacccaggaggcagaggttgctctgagctgagatcacaccactgcactccagcctgggagacagag i saiBol1.JH378145 I 3 I 25 s aotNan1.NW_018514471v1 7402778 248 + 9267652 cctgtaataccagcactttgggaggccgaggcaggcagatcacctgaagtcaggagttcgagactagcctagttcaacatggtgaaactccacgtctactaaaaatacaaaatttagccaggcatggttgcgtgggcctgtaatcccagctactcgggaggctgaggcaagaaaatcgcttgaacccaggaggcagaggttgctctgagccgagatcacaccactgcagtccagcctgggagacagag i aotNan1.NW_018514471v1 I 26 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4112486 207 + 55844845 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=15677.000000 s hg38.chr14_KI270725v1_random 129540 19 + 172810 caagactccgtgtcaaaaa s gorGor5.CYUI01000522v1 112883 19 + 126596 caagactccatgtcaaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700013 18 + 72422247 caagactccgactaaaaa- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154018 19 - 99891981 caagactccatctcaaaaa i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20092117 19 + 128169293 tgagattctgtctcaaaaa i calJac3.chr8 C 0 C 0 s aotNan1.NW_018514471v1 7403026 19 + 9267652 tgagactctgtctcaaaaa i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4112486 207 + 55844845 I e saiBol1.JH378145 17672699 25 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=2290.000000 s hg38.chr14_KI270725v1_random 129559 5 + 172810 --acaaa s gorGor5.CYUI01000522v1 112902 5 + 126596 --aaaaa i gorGor5.CYUI01000522v1 C 0 C 0 s nomLeu3.chr17 44154037 5 - 99891981 --aaaaa i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20092136 5 + 128169293 --aaaaa i calJac3.chr8 C 0 C 0 s aotNan1.NW_018514471v1 7403045 5 + 9267652 --aaaaa i aotNan1.NW_018514471v1 C 0 I 41 s canFam3.chr18 4112693 5 + 55844845 tcaaa-- i canFam3.chr18 I 207 C 0 e ponAbe2.chrUn 5700031 0 + 72422247 C e dasNov3.JH578441 315441 1925 - 1446996 I e saiBol1.JH378145 17672699 25 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=-4329.000000 s hg38.chr14_KI270725v1_random 129564 21 + 172810 caaacaaaaaaaaa---aaaaacg s gorGor5.CYUI01000522v1 112907 24 + 126596 aaaaaaaaCAACAACACAAAAACG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700031 7 + 72422247 -----------------caaaagg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154042 12 - 99891981 aataa------------ataaagg i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20092141 12 + 128169293 ---------aaaaa---aaaaaga i calJac3.chr8 C 0 I 4 s canFam3.chr18 4112698 12 + 55844845 -------taaataa---ataaa-- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e saiBol1.JH378145 17672699 25 + 18371965 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7403050 41 + 9267652 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=22042.000000 s hg38.chr14_KI270725v1_random 129585 24 + 172810 aggaaatagtacacgaaaaaacag s gorGor5.CYUI01000522v1 112931 24 + 126596 AGGAAATAGTACACGAAAAAGCCG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700038 24 + 72422247 aggaaatagtacatgaaaaagcag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154054 24 - 99891981 aggaaatagtacatgaaaaagcag i nomLeu3.chr17 C 0 I 1 s calJac3.chr8 20092157 24 + 128169293 ATTAAATAATACATAAAGAGGCAG i calJac3.chr8 I 4 I 1 s saiBol1.JH378145 17672724 24 + 18371965 attaaataataCATAAAGAGGCAG i saiBol1.JH378145 I 25 I 1 s canFam3.chr18 4112710 14 + 55844845 ----------atctttaaaaataa i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7403050 41 + 9267652 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=22304.000000 s hg38.chr14_KI270725v1_random 129609 17 + 172810 aattaaagcaactgggt s gorGor5.CYUI01000522v1 112955 17 + 126596 AATTAAAGCAACTGAGT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700062 17 + 72422247 aagtaaagcaactgact i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154079 17 - 99891981 aattaaagcaactgagt i nomLeu3.chr17 I 1 C 0 s calJac3.chr8 20092182 17 + 128169293 AATTAGAACAACTGACC i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 17672749 17 + 18371965 AATTAGAACAACTGACC i saiBol1.JH378145 I 1 C 0 s aotNan1.NW_018514471v1 7403091 17 + 9267652 AATTAGAACAACTGACC i aotNan1.NW_018514471v1 I 41 C 0 s canFam3.chr18 4112724 8 + 55844845 aataaaag--------- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207082 460 - 3566421 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=10842.000000 s hg38.chr14_KI270725v1_random 129626 5 + 172810 atata s gorGor5.CYUI01000522v1 112972 5 + 126596 ATATA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700079 5 + 72422247 atata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154096 5 - 99891981 atata i nomLeu3.chr17 C 0 C 0 s calJac3.chr8 20092199 5 + 128169293 ATATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17672766 5 + 18371965 ATATG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2207542 5 - 3566421 ATATG i cebCap1.NW_016107540v1 I 460 C 0 s aotNan1.NW_018514471v1 7403108 5 + 9267652 ATATG i aotNan1.NW_018514471v1 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4112732 0 + 55844845 C e otoGar3.GL873564 1647992 1145 - 14340318 I e colAng1.NW_012115910v1 5212663 459 - 6934359 I e manLeu1.NW_012105809v1 676297 449 + 1799296 I e chlSab2.chr21 121544408 474 - 127223203 I e cerAty1.NW_012000909v1 7606647 460 - 10077455 I e macNem1.NW_012011522v1 372999 455 - 3123512 I e macFas5.chr3 125025922 451 - 192294377 I e rheMac8.chr3 52380172 451 + 185818997 I e panTro5.chr1 126709900 54727 + 228573443 I a score=1014645.000000 s hg38.chr14_KI270725v1_random 129631 125 + 172810 tttaaaaatgcaaaagctcactttttcagaaaaatattaaaatattaaatctaacaaatatctaggtagactgatggagaaaaatacagaaaatgcacaaaaaaccaattacctggaatgCGAAT s gorGor5.CYUI01000522v1 112977 125 + 126596 TTTAAAAATGCAAAAGCTCACTTTTTCAGAAAAACATTAAAATATTAAATCTAACAAATATCTAGGTAGACTGATGGAGAAAAATACAGAAAATGCACAAAAAACCAATTACCTGGAATGCGAAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700084 125 + 72422247 tttaaaaatgcaaaagctcactttttcagaaaaatattaaaatattaaatctaagaaatatctaggtagactgacagagaaaaatacacaaaatgcacaaaaaaacaattacctggaatgcgaag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154101 125 - 99891981 tttaaaactgcaaaagctcactttttcagaaaaatattaaaatattaaatctaacaaatatctaggtagactgatggagaaaaatacagaaaatgcacaaaaaaccaattacctggaatgagaaG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52380623 125 + 185818997 TTTAAAAATTCAAAAACTCACTttctcagaaaaatattaaaatattaaatctaacaaatatctaggtaggctgatggagaaaaatagagaaaatgcacaaataaccaattacctggaatgcgaag i rheMac8.chr3 I 451 C 0 s macFas5.chr3 125026373 125 - 192294377 TTTAAAAATTCAAAAACTCACTTTCTCAGAAAAATATTAAAATATTAAATCTAACAAATATCTAGGTAGGCTGATGGAGAAAAATAGAGAAAATGCACAAATAACCAATTACCTGGAATGCGAAG i macFas5.chr3 I 451 C 0 s macNem1.NW_012011522v1 373454 125 - 3123512 TTTAAAAATTCAAAAACTCACTttctcagaaaaatattaaaatattaaatctaacaaatatctaggtaggctgatggagaaaaatagagaaaatgcacaaataaccaattacctggaatgcgaag i macNem1.NW_012011522v1 I 455 C 0 s cerAty1.NW_012000909v1 7607107 125 - 10077455 TTTAAAAATTCAAAAACTCACTTTGTCAGAaaaatattaaaatattaaatctaagaaatatctaggtagactgatggagaaaaatagagaaaatgcacaaataaccaattacctggaatgcgaag i cerAty1.NW_012000909v1 I 460 C 0 s chlSab2.chr21 121544882 125 - 127223203 TTTAAAAATTCAAAAACTCACTTTCTCAGAAAAATGTTAAAATATtaaatctaacaaatatctaggtagactgatggagaaaaatagagaaaatgcacaaataaccaattacctggaatgtgaag i chlSab2.chr21 I 474 C 0 s manLeu1.NW_012105809v1 676746 125 + 1799296 TTTAAAAATTCAAAAACTCACTttctcagaaaaatattaaaattttaaatctaacaaatatctaggtagactgatggagaaaaatagagaaaatgcacaaataaccaattacctggaatgcgaag i manLeu1.NW_012105809v1 I 449 C 0 s colAng1.NW_012115910v1 5213122 125 - 6934359 TTTAAAAATTCAAAAACTCACTttctcagaaaaatattaaaatattaaatctaacaaatatctaggtagactgatggagaaagatagagaaaatgcacaaataaccaattacctggaatgcgaag i colAng1.NW_012115910v1 I 459 C 0 s calJac3.chr8 20092204 117 + 128169293 TTTAAaaattcaaaagctcactttttcagaagaaca--------ttaaatctgacaaatatctgggtgcactgatggagaaaaatacagagaatatataaatagccaattatttggaatgcaaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17672771 117 + 18371965 TTTAAaaattcaaaagctcactttttcagaagaata--------ttaaatctgacaaatatctaggtgtactgatgcagaaaaatacagagaatacataagtaaccaattatttggaacgcgaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2207547 117 - 3566421 TTTAAaaattcaaaagctcactttttcagaagaata--------ttaaatctgacaaatatctaggtgcactgatggagaaaaatacagagaatgcataaatagccaattatttggaatgcaaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7403113 117 + 9267652 TTTAAAAATTTAAAAGCTCACTTTTTCAGAATAATA--------TTAAATCTGACAAATATTTACGTGCACCGATGGAGAAAAATACAGAGAATACATAAGTAACCAATTATTTGGAATGCAAAA i aotNan1.NW_018514471v1 C 0 I 19 s canFam3.chr18 4112732 103 + 55844845 ttgaaaaattcaaa--------ctttgataataataataaagcaaagaatcca--------ctagcaagactagtgaagatacatgaagaaaattctcaagcaacc-attaactggaacg----- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e panTro5.chr1 126709900 54727 + 228573443 I a score=71671.000000 s hg38.chr14_KI270725v1_random 129756 16 + 172810 GTTACAAA--ACGT-CAGC s gorGor5.CYUI01000522v1 113102 16 + 126596 GTTACAAA--ACGT-CAGC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700209 16 + 72422247 gatacaaa--acgt-cagc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154226 16 - 99891981 CATACCAA--ACAT-CAGC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52380748 16 + 185818997 gatacaAA--ATGT-CAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125026498 16 - 192294377 GATACAAA--ATGT-CAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 373579 16 - 3123512 gatacaAA--ATGT-CAGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607232 16 - 10077455 gatacaAA--ATGT-CAGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545007 16 - 127223203 gatacaAA--ATGT-CAGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 676871 16 + 1799296 gatacaAA--ATGT-CAGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213247 16 - 6934359 gatacaAA--ATGT-CAGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092321 16 + 128169293 --tgcaaaggagac-aAGC i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 17672888 16 + 18371965 --tgcaaaggagac-aAGC i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 2207664 16 - 3566421 --tgcaaaggagac-aAGC i cebCap1.NW_016107540v1 C 0 C 0 s canFam3.chr18 4112835 16 + 55844845 -gtaaaga--aggcacagt i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e aotNan1.NW_018514471v1 7403230 19 + 9267652 I e panTro5.chr1 126709900 54727 + 228573443 I a score=2287616.000000 s hg38.chr14_KI270725v1_random 129772 331 + 172810 AGTTGTAGATTTTAAATAAGCAATGATTTTTG----AGTTCAACCATGATGGTG-----TATATTGAAAAGAATCTCTCAGA-AA-AAAAGAAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCAGTATTAAAGTCTTCCAAATCTACCAGTTATGGAGTTATTGGTCTTGGACTAACTCTCCTGAAAAG---AAAaaaacaaaacaaaaca------aaacaaaac--aa-----------aac-----CTAA---AAACCTGGAAAAAATGGCCTACCATGGGCACTGGCAATGCATCCAAGCAGGTAGGACCTGG-GTGCTACAttctctttgtcagaacacaaaacattcatacactcttc s gorGor5.CYUI01000522v1 113118 318 + 126596 AGTTGTAGATTTTAAATAAGCAATGATTTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAGA-AA-AAAAGAAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAAGTCGTCCAAATCTACCAGTTATGGAGTTATTGGTCTTGGACTAACTCTCCTGAAAAG---AAAAG-------------A------AAACAAAAC--CA-----------AAC-----CTAA---AATCCTGGATAAAATGGCCTACCGTGGGCACTGGCAATGCATCCAAGCAGGTAGGACCTGC-GTGCTACAttctctctgtcagaacacaaagcattcacacagtcttc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700225 335 + 72422247 agttgtagattttaaaTAAGCAATGA-CTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAGA-AA-AAAAGGAAAAGAA-------------------AACTGTTATAAATCTATGTACAAAATGTTAAGCACTATTGAAGTCTTCCAAATCTAGCAGTTATGGAGTTATTGGTCTTGGACTAACTCTCCTGAAAAG---AAAAAAACAAAACAAAACA------AAAAAACCCTAAA-----------AAC-----CTGGATCAAACCTGGATAAAATAGCCTACTGTGGGCACTGGCAATGCAACCGAGCAGGTAGGACATGG-GTGCTACAttctctttgtcagaacacgaagcattcatacactcttc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154242 330 - 99891981 AGTTGTAGATTTTAAATAAGCAGTGA-CTTTG----AGTTCAACCATGGTGGGG-----TATATTGAAAATAATCTCTCAGA-AA-AAAAGAAAAAGAA-------------------AATTGTTATAAAGATATGTACAAAATGTTAAGCACTATTAAAATCTTCCAATTCTATCAGTTATGGAGTTATTAGTCTTGGACTAACTCTCCTGAAAAG---AAaaacaaacaaacaaaca------aacaaaaaa--ca-----------aac-----CTAA---AAACCTGGATAAAATAGCCTACCGTGGGCACTGACAATGCAACCAAGCAGGTAGGACATGG-GTGCTACAttctttttgtcagaacacgaagcattcatacactcttc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52380764 305 + 185818997 AGCTGTAGATTTTAAATACGCAGTGA-CTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAAA-AACAAAAAGAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAagtcttccagttctaccagttatggagttactggtcttgaactaactctcctgcaaag----------------------------------aaa--aa-----------aac-----ttaa---aaacccggataaaataGCCTACTGTGGGCACTGGCAATGCAACCACGCAGGTAGGACATGT-GTACTACAttctctttgtcagaacatgaagcattc-tacactcttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125026514 306 - 192294377 AGCTGTAGATTTTAAATACGCAGTGA-CTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAAA-AACAAAAAGAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAAGTCTTCCAGTTCTACCAGTTATGGAGTTACTGGTCTTGAACTAACTCTCCTGCAAAG---------------------------------AAAA--AA-----------AAC-----TTAA---AAACCCGGATAAAATAGCCTACTGTGGGCACTGGCAATGCAACCACGCAGGTAGGACATGT-GTACTACAttctctttgtcagaacatgaagcattc-tacactcttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 373595 307 - 3123512 AGCTGTAGATTTTAAATACGCAGTGA-CTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAAA-AACAAAAAGAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAAGTCTTCCAGTTCTACCAGTTATGGAGTTACTGGTCTTGAACTAACTCTCCTGAAAAG---------------------------------AAAA--AA-----------AAC-----TTAA---AAACCCGGATAAAATAGCCTACTGTGGGCACTGGCAATGCAACCAAGCAGGTAGGACATGT-GTACTACAttctctttgtcagaacatgaagcattcatacactcttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607248 324 - 10077455 AGCTGTAGATTTTAAATACCCAGTGA-CTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAAA-A--AAAAGAAAAAGAA-------------------AACAGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAAGTCTTCCAGTTCTACCAGTTATGGAGTTACTGGTCTTCAACTAACTCTCCTGaaagaaaaagaaa-------------a------aagaaaaaa--aa-----------aacaacaactaa---aaaCCTGGATAAAATAGCCTACTGTGGGCACTGGCAATGCAACCAAGCAGGTAGGACATGT-GTACTACAttctctttgtcagaacatgaagcattcatacactcttc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545023 316 - 127223203 AGCTGTAGATTTTAAATATGCAATGA-TTTTG----AGTTCAACCATGATGGGG-----TATATTGAAAAGAATCTCTCAAA-A--AAAAGAAAAATAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAAGTCTTCCAGTTCTACCAGTTATGGAGTTATTGGTCTTGAACTAACTCCCCTGGaaaa---aaaaa-------------a------aaaaagaaa--aa-----------aac-----ttaa---aaaCCTGGATAAAATAGCCTACTGTGGGCACTGGCAATGCAACCAAGCAGGTAGGACATGT-GTACTACAttctctttgtcagaacaggaagcattcatacactcttc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 676887 313 + 1799296 AGCTGTAGATTTTAAATACGCAGTGA-CTTTG----AGTTCAACCATGATGGGG-----TACATTCAAAAGAATCTCTCAAAGA--AAAAGAAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAGCACTATTAAAGTCTTCCAGTTCTACCAGTTATGGAGTTATTGGTCTTGAACTAATTCT----Gaaaa---aaaaa-------------a------aaaaaaaaa--aa-----------aac-----ttaa---aaaTCTAGATAAAATAGCCTACTGTGTGCACTGGCAATGCAACCAAGCAGGTAGGACATGT-GTACTACAttctctttgtcagaacatgaagcattcatatactcttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213263 327 - 6934359 AGCTATAGATTTTAAATACGCAGTGA-CTTTG----AGTTCAACCATCATGGGG-----TATATTGAAAAGAATCTCTCAAA-A--AAAAGTAAAAGAA-------------------AACTGTTATAAAGCTATGTACAAAATGTTAAACACTATTAAAGTCTTCCAGTTCTACCAGTTACGGAGTTATTAGTCTTGAACTAACTCTTCTgaaaaa---aaaaa-------------a------gaaaaaaaa--aaggaaaaaaaGCAAC-----TTAA---AAACCTGGATAAAATAGCCTACTGTGAGCACTGGCAATGCAACCAAGCAGGTAAGACATGt-gcactacattctcttcgccagaacatgaaccattcatacactcttc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092340 321 + 128169293 AGCTGTAGATTTTAAATAAGCAATGA-CTTTG----AGTTCAATCAT-ATGGGG-----TATATTGAAAAGAATCTCTCATA-AA-ATAAG--AAAACA-------------------ATCTCTTATAATGCTATGCACAAAATGTTAAGCATGATTAAAGTCTTCCACTTCTACTAGTTACAGAGCTACTGGTCTTGGACTAACTCTCCTGAAAAA---AACAA-------------AGACAACAACAAAAAA--AC-----------AAC-----TTAA---AAACCTGAATAAAATAGCCTACTGTGGACTTTGGCAACGCAACCAAGCAGGTAGGACATGGGGTACTACAttctctttgtcagaacggggagcattcacacactagtc i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 17672907 315 + 18371965 AGCTGTAGATTTTAAATAAGCAATGA-CTTTG----AGTTCAATCGT-ATGGGG-----TATA-TGGAAAGAATCTCGCATC-AA-ATAAGAAAAAAAA-------------------AACTCTTATAAAGCTATGCACAAAATGTTAAGCATGATTAAAGTCTTCCACTTCTACTAGTTACAGAATTACTGGTCTTGGACTAACTTTCCTGAAAAA---ACAAA-------------A------AACAAAAAA--AC-----------AAC-----TTAA---AAACCTGAATAAAATAGCCTACCATGGACATTGGCAATGCCACCAAGCAGGTAGCACATGGGGTACTACATTCTC-Ctgtcagaacaggaagccttcgcacgctaggc i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 2207680 304 - 3566421 AGCTGTAGATTTTAAATAAACAATGA-CTTTG----AGTTCAATCAT-ATGGGG-----TACATGGAAAAGAGTCTCTCATA-AA-AT-----AAAAAA-------------------ATCTCCTATAAAGCTATGCACAAAATGTTAAGCATGATTAAAGTCTTCCACTTCTACTAGTTACAGAGTTACTGGTCTTGGACTAACTCTCCTGAATAA---A---------------------------AAAACA--AC-----------AAC-----TTAA---AAACCTGAATAAAATAGCCTACCACGGACATTGGCAATGCAACCAAGCAGGCAGGACATGGGGTACTACATTCTCTTTGTCAGAACAGGAAGCCTTCACACACAAGTC i cebCap1.NW_016107540v1 C 0 I 11 s aotNan1.NW_018514471v1 7403249 312 + 9267652 AGCTGTAGATTTTAAATAAGCAATGA-CTTTG----AGTTCAATCAT-ATGGGG-----TATATTGAAAAGAATCTCTCATA-AA-ATAAA--AAGAAA-------------------ATCTTTTATAAAGCTATGCACAAAATGTTAAGCATGATTAAAGTCTTCCACTTCTACTAGTTACAGAGTTACTGGTCTTGGACTAACTCTCCTGAAAAA---AAAAA-------------A---------ACAACA--AC-----------AAC-----TTAA---AAACCTGAATAAAATAGCCTACCATGGACATTGGCAATGCAACCAAGCAGGTAGGACATGGAGTACTACAttctccttgtcagaacaggaagccttcacacactagtc i aotNan1.NW_018514471v1 I 19 C 0 s canFam3.chr18 4112851 329 + 55844845 catggcatatttgcacattaaaatga-tGTTGTGTCATTTGTATCGTTATGGGGTAGCATATGGTGGAGTAAGTCTCTCAGA-A--AAGAGAAACAGAACCAAAACCAAAACCAAACCAAACACCGTAA-GCTATGCAGTAGACATTAAGCGATAATACGATCTCCCCATTCTGGCACTCTTGTGGTTA----TGTTGGGCCAAC---CTTGACAAA---AACCA--------------------TCTATAAAA--GG-----------CGC-----ACAA---AA---TAAACGAAACAAGTGACTGCAGGCGTTGG-AGTTCCACCAAGCCCAAAGGACATGAGGTACTACATTctc--tgtcagaacatttaa-atttacatactcttt i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e panTro5.chr1 126709900 54727 + 228573443 I a score=143585.000000 s hg38.chr14_KI270725v1_random 130103 18 + 172810 tcatcctcactttcacct s gorGor5.CYUI01000522v1 113436 18 + 126596 tcaccctcactttcacct i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700560 18 + 72422247 tcaccctcactctcacct i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154572 18 - 99891981 tcaccctcactctcatct i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381069 18 + 185818997 ccaccctcactctcacct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125026820 18 - 192294377 ccaccctcactctcacct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 373902 18 - 3123512 ccaccctcactctcacct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607572 18 - 10077455 ccaccctcactctcacct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545339 18 - 127223203 ccaccctcactctcacct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677200 18 + 1799296 ccaccctcactctcacct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213590 18 - 6934359 ccaccgtcactctcacct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092661 18 + 128169293 ccaccctcactctcacct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17673222 18 + 18371965 ccaccctcactcccacct i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 7403561 18 + 9267652 ccaccctccctctcacct i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4113180 17 + 55844845 ccactctta-ttgcacca i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2207984 11 - 3566421 I e panTro5.chr1 126709900 54727 + 228573443 I a score=1551384.000000 s hg38.chr14_KI270725v1_random 130121 176 + 172810 tttaatcttagatctactattaaatgtattcaacattact-------atcaatcctttggtcaaaatttctttactcacattgtgcttgatgcactt-ggatagactgttcaagaactt---gtgagtagtgaattcctcaaactcttgcatattt-aaaatcacatttttgaaccttgatgcttgaa s gorGor5.CYUI01000522v1 113454 176 + 126596 tttaatcttagatctactattaaatgtattcaacattact-------atcaatcctttggtcaaaatttctttactcacattttgcttgatgcactt-ggatagactgttcaagaaagt---gtgagtagcgaattcctcaaactcttgcatattc-aaaatcacatttttgaaccttgatgcttgaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700578 176 + 72422247 tttaatcttagatctactattaaatgtattcaacattact-------atcaatcctttggtcaaaatttctttactcacattttgcttgatgcactt-ggatagactgttcaagaaagt---gtgagtagtgaattcctcaaactcttgcatattt-aaaattagatttttgagccttgatgcttgaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154590 174 - 99891981 tttaatcttagatctactattaaacgtattcaacattact-------atcaatccttt-gtcaaaatttctttactcacattttgcttgatggactt-ggatagactgtt-aagaaagt---gtgagtagtgaattcctcaaactcttgcatattt-aaaattacttttttgaaccttgatgcttgaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381087 176 + 185818997 tttaatctcagatctactattaaatatgttcaacattact-------atcaatcctttggtcaaaatttctctactcacattttgcttgatgcactt-ggatagactgttcaagaaagt---gtgagtagcgaattcctcaaactcttgcatattt-aaaattacacttttgaaccttgatgcttgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125026838 176 - 192294377 tttaatctcagatctactattaaatatgttcaacattact-------atcaatcctttggtcaaaatttctctactcacattttgcttgatgcactt-ggatagactgttcaagaaagt---gtgagtagcgaattcctcaaactcttgcatattt-aaaattacacttttgaaccttgatgcttgaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 373920 176 - 3123512 tttaatctcagatctactattaaatatgttcaacattact-------atcaatcctttggtcaaaatttctctactcacattttgcttgatgcactt-ggataaactgttcaagaaagt---gtgagtagcgaattcctcaaactcttgcatattt-aaaattacacttttgaaccttgatgcttgaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607590 162 - 10077455 tttaatctcagatctactattaaatatgttcaacattact-------atc--------------aatttctctactcacattttgcttgatgcactt-ggatagactgttcaagaaagt---gtgagcagcgaattcctcaaactcttgcatattt-aaaattacatttttgaaccctgatgcttgaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545357 176 - 127223203 tttaatgtcagatctactattaaatattttcaacattact-------atcaatcctttggtcaaaatttctctgctcacattttgcttgatgcactt-ggatagaccgttcaagaaagt---gcgagcagcgaattcctcgaactcttgcatattt-aaaattacatttttgaaccttgatgcttgaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677218 176 + 1799296 tttaatcttagatctactattaaatatgttcaacattact-------atcaatcctttggtcaaaatttctctactcacattttgcttgatgcactt-ggatagactgtttaagaaagt---gtgagtagcgaattcctcaaactcttgcatattt-aaaattacacttttgaaccttgatgcttgaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213608 176 - 6934359 tttaatcttagatctactattaaatatgttcaacattact-------atcaatcctttggtcaaaatttctctactaacattttacttgatgcactt-ggatagactgttcaagaaagt---gtgagtagcgaattcctcaaactcttgcatattt-aaaattacatttttgaaccttgatgcttgaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092679 183 + 128169293 ttcaatctcagatctattattgaatgtattcaatactattgaatgtaatcaatccttttgttgaaatttctctactcatattttgcttgatgcactt-gggtagactgttcaagaaagt---acgagtagcaaattccacaaactcttgcatattt-aaaattacactttttaaccctgatgctcaaa i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 17673240 177 + 18371965 tttaatctcagatctactagagaacgtattcaatactatt-------atcaatccttttatcaaaatttctctacttatattttgctcgatgcactt-gggtaaatcgttcaagaaagt---gtgagcagcgaattccacaaactcttgcatatttaaaaattaccctttttaccctagatgcttgaa i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 2207995 176 - 3566421 tttaatctcagatctattattgaatatattcaatactatt-------atcaaaccttttatcaaaatttctttatgcatattttgcttgatgcactt-gggtagactgttcaagaaagt---gtgagtggcgaattccacaaactcttgcatactt-aaaattacactttttaaccttgatgctcgaa i cebCap1.NW_016107540v1 I 11 I 57 s aotNan1.NW_018514471v1 7403579 176 + 9267652 ttcaatctcagatctattattgaatgtattcaatactact-------atcaatccttttatcaaaatttttctactcatattttgcttgatgcactt-aggtagactgttcaagaaagt---gtgagtagtgaattccacaaactcttgcatactt-aaaattgcactttttaaccttgacgctcaaa i aotNan1.NW_018514471v1 C 0 I 1 s canFam3.chr18 4113197 178 + 55844845 tttaatcttagatctactattaagtatactcaatattacc-------attaatcatttcat-aaaattcaccacctcacatcatacttcatgaaattctaatagactctttagaaaagtctaatgaatatataatttctcaaatttttgcatgttt-aaaactacactcattagccttgttgcttaa- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e panTro5.chr1 126709900 54727 + 228573443 I a score=311147.000000 s hg38.chr14_KI270725v1_random 130297 54 + 172810 gtgtagtttggGTAACAGATGACCTTTAAGCCAATTTTGGCATGCAAGGGGTT--G s gorGor5.CYUI01000522v1 113630 56 + 126596 gtgtagcttggGTAACAGATGGGCTTTAAGCCAATTTTGGCATGCAAGGGGTTGAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700754 56 + 72422247 gtgtagcttggGTAATGGATGGGCTTTAAGCCAATTTTGGCATGCAATGGGTAGAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154764 56 - 99891981 gtgtagcttggGTAACAGATTGGCTTTAAGCCAATTTTGGTATGCAAGGGGTTCAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381263 56 + 185818997 gtgcagcttggGTAACAGGTTGGCTTTAAGCCGATTTTGAGCTTCAAGGGGTTGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027014 56 - 192294377 gtgcagcttggGTAACAGGTTGGCTTTAAGCCGATTTTGAGCTTCAAGGGGTTGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374096 56 - 3123512 atgcagcttggGTAACAGGTTGGCTTTAAGCCGATTTTGAGCTTCAAGGGGTTGAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607752 56 - 10077455 gcgcagtttggGTAACAGGTTGGCTTTAAGCCAATTTTGAGCTTCAAGGGGTTGAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545533 56 - 127223203 gtgcagcatggGTAACAGGTTGGCTTTAAGCCAATTTTGAGCTTCAAGGGGTTGAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677394 56 + 1799296 gtgcagcttggGTAACAGGTTGGCTTTAAGCCGATTTTGAGCTTCAAGGGGTTGAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213784 56 - 6934359 gtgcagcttggGTAACAGGTTGGCTTTAAGCCAATTTTGCGCTTCAAAGGGTTGAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092863 54 + 128169293 gggtggcttggctAACAGGTTGGGTTTGAGCCTAACCTGGCATGCAAAGGGTTG-- i calJac3.chr8 I 1 I 2 s saiBol1.JH378145 17673418 54 + 18371965 gggcagcttggctAACAGGTTGAATTTAAGCCTAATCTGACATGCAAAGGGTTG-- i saiBol1.JH378145 I 1 I 2 s aotNan1.NW_018514471v1 7403756 54 + 9267652 gggcggcttggctAACAGGTTGGATTTAAGCCTAATCTGGCATGCAAAGGGTTG-- i aotNan1.NW_018514471v1 I 1 I 2 s canFam3.chr18 4113375 47 + 55844845 ttgctgcttggtt----ggTCCAGTACAAATATGGTTTGGGATGCA--GGATC--- i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e cebCap1.NW_016107540v1 2208171 57 - 3566421 I e panTro5.chr1 126709900 54727 + 228573443 I a score=326628.000000 s hg38.chr14_KI270725v1_random 130351 41 + 172810 TTTATTAGGCATC-AGCACTGCTG-AAAATCGTGGGGATGCAG s gorGor5.CYUI01000522v1 113686 41 + 126596 TTTATTAGGCATC-AGCACCGCTG-AAAATCGTGGGGATGCAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700810 41 + 72422247 TTTACTAGGCATC-AGCACCTCTG-AAAATCGTGGGGATGCAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154820 40 - 99891981 TTTATTAAGCATC-AG-ACCTCTG-AAAATCATGGGGATGCAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381319 42 + 185818997 TTTATTAGGCTTC-AGCATCTCTGAAAAAACGTGTGGATGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027070 42 - 192294377 TTTATTAGGCTTC-AGCATCTCTGAAAAAACGTGTGGATGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374152 42 - 3123512 TTTATTAGGCTTC-AGCATCTCTGAAAAAACGTGTGGATGCAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607808 42 - 10077455 TTTATTAGGCTTC-AGCATCTCTGGAAAAACATGTGGATGCAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545589 42 - 127223203 TTTATTAGGCTTC-AGCATCTCTGGAAAAACGTGTGGATGCAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677450 42 + 1799296 TTTATTAGGCTTC-AGCATCTCTGGAAAAACGTGTGGATGCAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213840 43 - 6934359 TTTATTAGGCTTCAAGCATCTCTGGAAAAACGTGGGGATGCAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092919 42 + 128169293 TTTATTAGCCATC-AGCACCTCTGGAAAAACGTGGGGATGCAG i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 17673474 42 + 18371965 TTTATTAGCCATC-AGCACCTCTGGAAAAACGTGGGGATGCAG i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 2208228 42 - 3566421 TTTATTAGCCATC-AGCACCTCTGGAAAAACGTGGGGGTGCAG i cebCap1.NW_016107540v1 I 57 C 0 s aotNan1.NW_018514471v1 7403812 42 + 9267652 TTTATTAGCCATC-AGCACCTCTGGAAAAACGTGGGGATGCAG i aotNan1.NW_018514471v1 I 2 C 0 s canFam3.chr18 4113422 40 + 55844845 CTTATTGGAGATC-TGC--TTGTGAAAAGAGGTGGGAAAGCAG i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e otoGar3.GL873564 1647992 1145 - 14340318 I e panTro5.chr1 126709900 54727 + 228573443 I a score=19311.000000 s hg38.chr14_KI270725v1_random 130392 4 + 172810 GCTT s gorGor5.CYUI01000522v1 113727 4 + 126596 GCTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700851 4 + 72422247 GCTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154860 4 - 99891981 GATT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381361 4 + 185818997 TATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027112 4 - 192294377 TATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374194 4 - 3123512 TATT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607850 4 - 10077455 TATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545631 4 - 127223203 TATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677492 4 + 1799296 TATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213883 4 - 6934359 TATC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092961 4 + 128169293 GATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17673516 4 + 18371965 GATT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2208270 4 - 3566421 GATT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7403854 4 + 9267652 GATT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649137 4 - 14340318 CATG i otoGar3.GL873564 I 1145 C 0 s canFam3.chr18 4113462 4 + 55844845 AATT i canFam3.chr18 C 0 I 4416 e dasNov3.JH578441 315441 1925 - 1446996 I e panTro5.chr1 126709900 54727 + 228573443 I a score=16800.000000 s hg38.chr14_KI270725v1_random 130396 2 + 172810 AA s gorGor5.CYUI01000522v1 113731 2 + 126596 AA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700855 2 + 72422247 AA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154864 2 - 99891981 AA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381365 2 + 185818997 AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027116 2 - 192294377 AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374198 2 - 3123512 AA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607854 2 - 10077455 AA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545635 2 - 127223203 AA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677496 2 + 1799296 AA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213887 2 - 6934359 AA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092965 2 + 128169293 AA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17673520 2 + 18371965 AA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2208274 2 - 3566421 AA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7403858 2 + 9267652 GA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649141 2 - 14340318 AT i otoGar3.GL873564 C 0 C 0 e dasNov3.JH578441 315441 1925 - 1446996 I e canFam3.chr18 4113466 4416 + 55844845 I e panTro5.chr1 126709900 54727 + 228573443 I a score=113919.000000 s hg38.chr14_KI270725v1_random 130398 11 + 172810 TTTCAACACTA s gorGor5.CYUI01000522v1 113733 11 + 126596 TTTCAACACTA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700857 11 + 72422247 TTTCAACACTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154866 11 - 99891981 TTTCAACACTA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381367 11 + 185818997 TTTCAACACTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027118 11 - 192294377 TTTCAACACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374200 11 - 3123512 TTTCAACACTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607856 11 - 10077455 TTTCAACACTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545637 11 - 127223203 TTTCAACACTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677498 11 + 1799296 TTTCAACACTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213889 11 - 6934359 TTTCAACACTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092967 11 + 128169293 TTTCAGCACTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17673522 11 + 18371965 TTTCAGCACTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2208276 11 - 3566421 TTTCAGCACTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7403860 11 + 9267652 TTTCAGCACTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649143 10 - 14340318 TTTTATCAC-A i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 317366 11 - 1446996 TTTTATCACTA i dasNov3.JH578441 I 1925 C 0 e canFam3.chr18 4113466 4416 + 55844845 I e panTro5.chr1 126709900 54727 + 228573443 I a score=7539908.000000 s hg38.chr14_KI270725v1_random 130409 737 + 172810 ----TTCTAAATACTTGAAA-GATATTATATAATTCTTTAATAAACTCCTGTGTATAAAAATGGTTCA----CA-TTAACTCAATATCCATGATTAAACATTTACAAAATCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTCTATGAGAG----------GAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAATATGTATCATATTACTCATAACCAGCCCTTCATATTCTATTCCTATTTTGGTATTTTAAAATAAGATATCTTTGAAACTCTTGAATTCAAAGAGGGAATCTGAATAATTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTTAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACATTTTTTTATCTGAATTCTAAGAACAATCACATTAGGTTTTAACCACGAATGTGAGAATCTTCTAAATGTTAGGGTGGAAAAATTTTTTAAATAATTGTATAGTAATTTTTTTCATCATAGTG---ACAGTGTGCTAAATTTTTTT--AAGCCAAGTATTACTGTAGA--CATTTAAGTCA---GGATTCTAAGAAGCTG---TTCTAAACTCGAAAATTTAGTTTCATATACACTGAT--ATTATATATAT----ATTTGCAT------AAAAAATTAATACATGTGAGCCATGTTTCAAATAGTTGAGAGATTATTATATCAAAGATTCTTGATTATATAAAATGCCAGTTACTTATAGGCACAC--G-TGCTTTAAATAATTACAAAG s gorGor5.CYUI01000522v1 113744 734 + 126596 ----TTCTAAATACTTGAAA-G-TATTATATAATTCTTTAATAAACTCCTGTGTCTACAAATGGTTCA----CA-TTAACTCAATATCCATGATTAAACATTTATAAAATCAAGGCACTGTTATTTAGTGGAGAGTTGCTGGCTATTCTATGAGAG----------GAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACCAGCCCTTCATATTCTATTCCTATTTTGGTATTTTAAAATAAGATATCTTTGAAACACTTGAATTCAAAGAGGGAATCTGAATAATTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTCAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAACCACAAATGTGAGAATATTCTAAATGTTAGGGTGGAAAAATTTTTTAAAT-ATTTTATAGTAATTTTTTTCATCATAGTG---ACAGTGTGCTAAATTTTTTT--AAGCCAACTATTACTATAGA--CATTTAAGTCA---GGATTCTAAGAAGCTG---TTCTAAAGTCCAAAATTTAGTTTCATATACACTGAT--ATTATATATAT----ATTTGCAT------AGAAAATTAATACATGTGAGCCATGTTTCAAATAGTTGAGAGATTATTATATCAAAGATTCTTGATTATATAAAATGCCAATTACTTATAGGCACAC--A-TGCTTTAAATAATTACAAAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5700868 735 + 72422247 ----TTCTAAATACTTGAAA-GATATTATATAATTCTTTAATAAACTCCTGTGTCTACAAATGGTTCA----CA-TTAACTCAATATCCATGATTAAACATCTATAAAATCAAGGCACTGTTATTTAGTGGAGACTTG-GGGCTATTCTATGAGAG----------GAGGTATTCTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACCAGCCCTTCATGTTCTATTCTTATTTTGGTATTTTAAAATAAGATATCTTTGAAACACTTGAATTCAAAGAGGGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTCAACAAATACAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTGTTTTCTAAATTCTAAGAACAATCACAATAGGTTTTAACCACAAATGTGAGAATATTCTAAATGTTAGCGTGGAAAAATTTTTTAAATACTCATATAGTAATTTTTTTCATCATAGTG---ACAGTGTGCTAAATTTTTTT--AAGTCAAATATTACTGTGGA--CATTTAAGTCA---AGATTCTAAGAAGCTG---TTCTAAAGTCCAAAATTTAGTTTCATATACAATGAT--ATTATATATAT----ATTTGCAT------ACAAAATTAATATATGTGAGCCATGTTTCAAATAGTTGAGAGATTATTATATCAAAGATTCTTGATTATATAAAATGCCAATTACTTATAGGCACAC--A-TGCTTTAAATAATTACAAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44154877 735 - 99891981 ----TTCTAAATACTTCAAA-GATATTATATAATTCTTTAATAAACTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACATCTATAAAATCAAGGCACTGTTATTTAGTGGAGACTTACTGGCTATTCTATGAGAG----------GAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACCAGCCCTTCATATTCTATTCCTATTTTGGTATTTTAAAATAAGATATCTTTGAAACACTTGAATTCAAAGAGGGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCAAAATTCTAAGAACAATCACAATAGG-TTTAACCACAAATGTGAGAATATTCTAACTGTCAGGGTGGAAAATTTTTTAAAATAATTTTATAGTAATTTTTTTCATCATAGTG---ACAGTGTGCTAAATTTTTTT--AAGTCAAATATTACTGTAGA--CATTTAAGTCA---AAATTCTAGGAAGTTG---TTCTAAAGTCCAAAATTTGGTTTCATATACAATGAT--ATTATATATAT----ATTTGCTC------ATAAAATTAATATATGTGAGCCATGTTTCAAATAGTTGAGAGATTATTATATCAAAGATTCTTGATTATATAAAATGCCAATTACTTATAGGCACAC--A-TGCTTTAAATAATTACAAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52381378 746 + 185818997 ----TTCTAAATATTTGGAA-GATATTATATAATTCTTTAATAAGCTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACGTCTATAAAACCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTCTATGAGAGCAGTTATTGTGAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACTGGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCAAAGAGAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAATAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAATGTCAGGGTGGAAAAGTTTTAAAAATAATTTTATAGTAACTTTTTTCATCATAGTG---ACATTGTGCTAAATTTTTTT--AAGTCAAATATTACTGTAGA--CATTTAAGTCA---AGATTCTAGGAAGTTG---TTCTAAAGTCCAAAATTTAGTTTCATAAACAATTAC--ATTATATATAAA---ATATGCAT------ATAAAATTAAAACACATGAGCCATGTTTCAAATAGTTGAGAACTTACTATATCAAAGATTCTTGATTAT-TAAAATGCCAGTTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027129 746 - 192294377 ----TTCTAAATATTTGGAA-GATATTATATAATTCTTTAATAAGCTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACGTCTATAAAACCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTCTATGAGAGCAGTTATTGTGAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACTGGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCAAAGAGAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAATAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAATGTCAGGGTGGAAAAGTTTTAAAAATAATTTTATAGTAACTTTTTTCATCATAGTG---ACATTGTGCTAAATTTTTTT--AAGTCAAATATTACTGTAGA--CATTTAAGTCA---AGATTCTAGGAAGTTG---TTCTAAAGTCCAAAATTTAGTTTCATAAACAATTAC--ATTATATATATA---ATATGCAT------ATAAAATTAAAACACATGAGCCATGTTTCAAATAGTTGAGAACTTACTATATCAAAGATTCTTGATTAT-TAAAATGCCAGTTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374211 746 - 3123512 ----TTCTAAATACTTGGAA-GATAATATATAATTCTTTAATAAGCTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACGTCTATAAAACCAAGGCACTGTTATTTAGGGGAGACTTGCTGGCTATTCTATGAGAGCAGTTATTGTGAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACTGGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCAAAGAGAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAATGTCAGGGTGGAAAAGTTTTAAAAATAATTTTATAGTAATTTTTTTCATCATAGTG---ACATTGTGCTAAATTTTTTT--AAGTCAAATATTACTGTAGA--CATTTAAGTCA---AGATTCTAGGAAGTTG---TTCTAAAGTCCAAAATTTAGTTTCATAAACAATTAC--ATTATATATATA---ATATGCAT------ATAAAATTAAAACACATGAGCCATGTTTCAAATAGTTGAGAACTTACTATATCAAAGATTCTTGATTAT-TAAAATGCCAGTTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7607867 744 - 10077455 ----TTCTAAATACTTGGAA-GATATTATATAATTCTTTAATAAGCTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACATCTATAAAATCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTCTATGAGAGCTGTTATTGTGAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACTGGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCAA--AGAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAATGTCAGGGTGGAAAAGTTTTTAAAATAATTTTATAGTAATTTTTTTCATCATAGTG---ACATTGTGCTAAATTTTTTT--AAGGCAAATATTACTGTAGA--TATTTAAGTCA---AGATTCTAGGAAGTTG---TTCTAAAGTCCAAAATTTAGTTTCATAAACAATT-----Ttatatatatatatatatgcat------ataAAATTAAAACACACGAGCCATGTTTCAAATAGTTGAGAACTTACTATATCAAAGATTCTTGATTAT-TAAAATGCCAATTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121545648 745 - 127223203 ----TTCTAAATACTTGGAA-GATATTATATAATTCTTTAATAAGCTCCTGTGTCTACAAATGGTTCT----GA-TTAACTCAACATCCATGATTAAACATCTATAAAATCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTC--TGAGAGCAGTTATTGTGAGACATTGTTATTGTAAT-CTCTTCCTCTCATAAAAGTGTATCATATTACTCATAACTGGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACCCTTGAATTCAAAGAGAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAATGTCAGGGTGGAAAAGTTTTAAAAATAATTTTATAGTAATTTTTTTCGTCATAGTG---ACATTGTGCTAAATTTTTTT--AAGTCAAATATTACTGTAGA--CATTTAAGTCA---AAATTCTAGGAAGTTG---TTCCAAAGTCCAAAATTTAGTTTCatatacaattatatattatatatat----atatgcat------ataAAATTAAAACACATGAGCCATGTTTCAAATAGTGGAGAACTTATTGTATCAAGGATTCTTGATTAT-TAAAATGCCAATTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 677509 740 + 1799296 ----TTCTAAATACTTGGAA-GATATTATATAATTCTTTAATAAGCTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACATCTGTAAAATCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTCTATGAGAGCTGTTATTGTGAGGTATTGTTATTGCAAT-CTCATCCTCTCATAAAAGTGTATCATATTACTCATAACTGACCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCAAAGAGAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTCTGGAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAAGGTCAGGGTGGAAAAGTTTTTAAAATAATTTTATAGTAATTTTTTTCATCATAGTG---ACATTGTGCTAAATTTTTTT--AAGGCAAATATTACTGTAGA--TATTTAAGTCA---AGATTCTAGGAAGTTG---TTCTAAAGTCCAAAATTTAGTTTCATAAACA-------ATTTTACATAT----ATATGCAT------ATAAAATTAAAACACACGAGCCATGTTTCAAATAGTTGAGAACTTACTATATCAAAGATTCTTGATTAT-TAAAATGCCAATTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5213900 742 - 6934359 ----TTCTAAATACTTGGAA-GATATTATATAATTCTTCAATAAGCTCCTGTGTCTACAAATGGTTCA----GA-TTAACTCAATATCCATGATTAAACATCTATAAAATCAAGGCACTGTTATTTAGTGGAGACTTGCTGGCTATTCTATGAGAGCAGTTATTGTGAGGTATTGTTATTGTAAT-CTCATCCTCTCATAAAAGTGTACCATATTACTCATAACCGGCCTTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCAAAGAGAGAATCTGAATAGTTTTCAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTCAAACTTTTTGGAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAACTGCAAATGTGAGAATATTCTAAATGTCTGGGTGGAAAAGTTTTTAAAATAATTTTATAGTAATTTTTTTCATCATAGTG---ACATTGTGCTAAA-TTTTTT--AAGTCAAATATTACTGTAGA--CATTTAAGTCA---AGATTCTAGGAAGCTG---TTCTACAGTCCAAAATTTAGTTTCatatataattat--attatatat------atatgcat------ataAAATTAAAACACATGAGCCATGTTTCAAATAGTTGAGAGCTTATTATATCAAAGATTCTTGATTAT-TAAAATGCCAGCTGCTTTTAGGCACAC--A-TGCTTTAAATAATTACAAAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20092978 726 + 128169293 ----TTTTAAATACTTGAGA-GTTATTATGTAATTCTTCAATAAACCCCTGTGTCTACAAATGGTTCA----GGTTTGACTCAACATCAATGATTAAACATCTATCAAATCAGGGCACTGCTGTTTAGTGGAGACTTGCTGGCTATTCTGTGAGAG----------TAGGTATTGTTATTGCAAT-CTCATCCTCTTATAAAAGTGTATCATATTACTCATAACCGGTCCTTCATATTCAATTCCTATTTTGGTATTTTAGAATAAAATATCTTTGAAACACTTGAATTCATAGATAGAATCTGAATGGTTTTTAAAATGTCAATGAAATGCTGTTTCTTCATGCTTGAACAACTAAAAATTGACTAAGGTGCTTCTCTTAAAACTTTCTGGAACA-TATTTTATCTAAATCCTAAGAAAAATCACAATCGTTTTTAACTACAAATGTAAGAATATGCTAAACGTCAGGGTGGAAAATTTTAAAGAATAATTTTATAGTCA-TTTTTTCATTATTGTG---ATATTGTGCtaaatttttttttaaattaaatattaCTGTAGA--GGTTTAAGTCA---AGATTTT---GAGTTG---TTCTAAAGTACAAAATTTAGTTTCATATGCAATGAT--ATTATAT--------ATTTGCAT------ATAAA-----AATATATGAGTAATGTTTCTAATAGTTGAGAACTTACTATATCAAAGATACTTGATTATATGAAATACCAATTATTTTTAGGCACAC--A-TGTTTAAAATAATTACAAAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17673533 713 + 18371965 ----TTTTAAATGCTAGAGA-GTTATTATGTAATTCTTCAATAAACCCCCGTGTCTACAAATGGTTCA----GATTTGACTCAAC------------------ATCAAATCAGGGCACTGCTATTTAGTGGAGACTTGCTGGCTATTCTGTGAGAG----------TAGGTATTGTTATTGTAAT-CTCATCTTTTTATAAAAGTGTATCATATTACTCATAACCAGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGAGGTCTTTGAAACACTTGAGTTCATAGATAGAATCTGAATGGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTTTTAAAACTTTCTGGAACA-TATTTTTTCTAAATCCTAAGAACAATCACAGTAGTTTTTAACTACAAATGTAAGAATATTCTAAATGTCAGGGTGGAAAAACTTTAAGAATAATTTTATGGTCA-TTTTTTCATCATTGTG---ACATTGTGCtaaatttttttaaaaattaaatattaCTGTAGA--GATTTAAGTCA---AGAATTTGAGGAGTTG---TTCTAAAGTACAAAATTTAGTTTCATATGCAATGAT--ATTATAT--------ATCTGTAT------GTAAA-TG--AATATATGAGTAATGTTTCTAATAGTTGAGAACTTACTGTATCAAAGATACTTGATTTTATAAAATATCAATTACTTGTAGGCACAC--A-TGTTTAAAATAATTACAAAG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2208287 732 - 3566421 ----TTTTAAATACTTGCCA-GTTACTATGTAATTCTTCAATAAACCCCCGTGTCTACAAATGATTCA----GATTTGACTCAACATCAGTGATTAAACGTCTATCAAATCAGAGCACTGCTATTTAGTGGAGAATTGCTGGCTATTCTGTGAGAG----------TAGGTATTGTTATTGTAAT-CTCATCCTCTTATAAAAGTGTATCATATTACTCATAACCAGTCCTTCATATTTTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCATAGATAGAATCTGAATGGTTTTTAAAATGTCAATGAAATGCCGTTTCTTCGTGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTAAAACTTTCTGGAACA-TATTTTATCTAAATCCTAAGAACAGTCACAATAGTTTTTAGCTACAAATGTAAGAATATTCTAAATGTCAGGGTGGAAAAATTTTAAGAATAATTTTATAGTCA-TTTTTTCATCATTGTG---ACATTGTGCTAAATTTTTTTTAAAATTAAATATTACTGAAGA--GATTTAAGTC----AGATTTTGAGGAGTTG---TTCTAAAGTACAAAATTTAGTTTGATATGCAATGAT--ATTATAT--------ATTTGTAT------ATAAAATT--AATATATGAATAATGTTTCTAATAGTTGAGAACTTACTATATCAAAGATACTTGATTATATAAAATACCAACTACTTTTAGGCACAC--ATTGTTTAAAATAACTACAAAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7403871 728 + 9267652 ----TTTTAAATACTTGAGA-GTTATTATGTAATTCTTCAACAAACCCCTGTGTCTACAAATGGTTCA----GATTTGACTCAACATCAATGATTAAACGTCTATCAAATCAGGGCACTGCTGTTTAGTGGAGACTTGCTGGCTATTCTGTGAGAG----------TAGGTATTGTTATTGTAAT-CTCATCCTCTTATAAAAGTGTATCATATTACTCATAACTGGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATATCTTTGAAACACTTGAATTCATAGATAGAATCTGAATGGTTTTTAAAATGTCAATGAAATGCCGTTTCTTCATGCTTGAACAACTAAAAATTGACTAAAGTGCTTCTCTTAAAACTTTCTGGAACA-TATTTTATCTAAATTCTAAGAACAATCACAATAGTTTTTAACTGCAAATGTAAGAATATTCTAAATGTCAGGGTGGAAAAATTTTAAGAATAATTTTATAGTCA-TTTTTTCATCATTGTG---ACATTGTGCT-AATTTTTTTTTAAATTAAATATTACTGTAGA--GATTTAAGTCA---AGATTTT---GAGTTG---TTCTAAAGTATAAAATTTAGTTTCATATGCAATGAT--ATTATAT--------ATTTGCAT------ATAAAATT--AATATATGAGTAATATTTCTAATAGTTGAGAACTTATTATATCAAAGATACTTGATTATATAAAATACCAATTACTTTTAGGCACAC--A-TGTTTAAAATAATTACAAAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649153 729 - 14340318 ----TTATAAATAATTGAAA-GTTATTATGTAATACCTTAATATATCTTTGTGTCTGCAAATGGCTTA----GATTTAACTCAACATCTATCATTAAACGTGAATTAAATCAAGGCACTACAATTCAGTGAAACCTTGCTGGATATTTGATGAGAG----------CGGGTATTGTTATTATAAT-CCCATGCTTTCATAAAAGTATATCATATTACTCATAACCAGCCCTTCATATTCTATTCCTATTTTGGTATTTTAGAATAAGATAAGTTTGAAACACTTGAATTCATAGACAGAATCTGAATAGTTTTTAAAATGTCAATGAAATGCCATTTCTTCATGCTTGAATAACTCAAAATTGGCTAAAGTGCTTCTCTTCAAACTTTCTGAAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTCAACTAAAAATGTGAGAATATTGTAAATGTCAGTGTAGataaa-ttaaaaaataattttataGTCA-CAATTTCATCATAGTG---AAATTGTCCTAATTTTTTTA--AAAGTAAATATAACTGTAGA--TATTTAAGTCA---AAATTCTGTCAAATTG---TTCTAAAGTCTGAAATTTAGTTTCATATGCAAT-----A-TGTATGTAA----ATATGCCT------ATGAAGTTAATATATATGCAC--TATCTGAAATAGTTGAGAGCTTATTGTATCAAATACACTCAATTATATGAAACACAGATTACTTTTAGGAGCAC--A-TGTTTAAAACAAATAGAAAG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4117882 624 + 55844845 ----TTCtaaatattgaaaa-attattatataatttCTCAATAAATACCTTTGCCTAAAAATGTTAAA----AATGTAATAAGATATCAATGATTAAATGTCTCCCAAATCAAGGCAATGCAATTCACTGGAACACTGCTGGATATTCTTTGAGAG----------CAGCTATTATTATTATAAA-CCCATGCTTTTAGAAAAATGTACCATATAACCCAAAATCAGCCTTTCATATTCTATTCCTAATTTAGTGTGTTAGAATAAGGTATTTTTGAAACACTTGAATTCATAAGGAGAATCT---TTTTTTTTTAAATGTCAATGAAATGCCATTTCTTCATGCTTGAACAACTAAAAATTGGCTCAAATTATTCTCCTCAAACTTTCTGAAACA-TTTTTTATCTAAATTCTAAGAACAATCACAATAGGTTTTAGCTACAAATGTGAGAATATTGTAAATGTCAGGGTGGATAAATTTCAAAATGAATTTTATAGTCACCTTATTCATCATAGTG---AAATTGTGCT-ATTTTTTTA--GAAATATATTTTATTGTACACTCATTTTGGTCA---TGATTTTGTGAAGCTGCACTTTTAAAGGCTGAAATTTAGTTTCTTATGTGATGAT--TGTATATGTAT----ATAT-----------------------------------------------------------------------------------------------------GCACAC--a-t------------------- i canFam3.chr18 I 4416 C 0 s dasNov3.JH578441 317377 752 - 1446996 TGCAATCAAAAAACCTGCAATATTATAAAAAAATTCCTCAATGTTCCCTTGGGTCCAGAAAAATCTTAATTGGATTCAATTCAACAACAGTAATTAAACACCTA-AAAATGAAGTCATTGAAAGTGAGTGGACCCTTGCTAGATATTCCATAATAG----------CAAGTATTGTTATTTTAAGACTGAGTTTTCAATACCAGTATATCATATTACTCAAAACCTGGCCTTCATATTCTATTCCTATTTTGGTGTTTTAGAATAAGGTATTTTTGAAACACTTGAATTCATAGAGAGAATCTGAATAGTTTTCTTAATGTCAATGAAATGCCATTTTGTCATGCTTTAACAACTTAAAATTGGCCTAAATGATTCTTTCCAAACTTTCTGAAACA-ATTTTTATCTGAATTCTATGAACAATCACAACAGGGTTTAGCTAGAAATGTGAGAATTTTGTAAATGTCAGGGTGCATACATTTCAAAATTAATTTTATAGTCA--CTTTCCATCATACTGTGAGAATTGTGCTAAATTTTTAA--AAAGCTCTTTTTACTGTAGA--CCTTCAGTTTAGTCAAATACTGTCAAGTTGTGCTTTTAAAGTCTGAAATTTAGTTTCATAATAAAT-----ATTATATGCAT----GTATGTATAAATAGACAGAATGAAAATATATTTCTAGTACATCAGAAATTTGAGGGCCTGTTGtattaaa------taattatattaaataaaatagatttttatGCACACCTA-TATTTAAAATAACTAAAAAG i dasNov3.JH578441 C 0 I 360 e panTro5.chr1 126709900 54727 + 228573443 I a score=279387.000000 s hg38.chr14_KI270725v1_random 131146 33 + 172810 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC s gorGor5.CYUI01000522v1 114478 33 + 126596 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5701603 33 + 72422247 GCAGTTGTGGTTGATTCTACTCT--TACTACTGGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44155612 33 - 99891981 GCAGTTGTGGTTGATTGTACTCT--TGCTACTGGT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382124 33 + 185818997 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027875 33 - 192294377 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374957 33 - 3123512 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7608611 33 - 10077455 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546393 33 - 127223203 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678249 33 + 1799296 GCAGTTGTGGTTGATTCTACTGT--TGCTACTGGC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5214642 33 - 6934359 GCAGTTGTGGTTGATTCTACTCT--TGCTACTGGC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20093704 33 + 128169293 ATAGGTGTGGTTGATTCTACTCT--AACAGTTGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674246 33 + 18371965 ATAGCTGTGGTTGATTCTACTCT--TACAGTTGAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209019 33 - 3566421 ATAGCTGTGGTTGATTCTACTCT--TACGGTTGAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7404599 33 + 9267652 GTAGCTGTGGTTGATTCTACTCT--TACAGCTGAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649882 35 - 14340318 ACAGTTGTGCTTGATTCTACACTTCTATTTCTGGA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4118506 14 + 55844845 -------------attataattt--ta------at i canFam3.chr18 C 0 C 0 e dasNov3.JH578441 318129 360 - 1446996 I e panTro5.chr1 126709900 54727 + 228573443 I a score=655000.000000 s hg38.chr14_KI270725v1_random 131179 73 + 172810 ATTTATATGG-ACATAATATTATGGTCTGAAGAAT-ATTTAGGCATATTTATTCCTCATATGATTAGAAGAACAA s gorGor5.CYUI01000522v1 114511 73 + 126596 ATTTATATGG-ACATACTATTATGGTCTGAAGAAT-ATTTAGGCAAATTTATCCCTCATATGATCAGAAGAACAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5701636 73 + 72422247 ATTTATATGG-ACATAATATTATGGTCTGAAGAAT-ATTTAGGCAAATTTATCCCTCATATGATCAGAAGAACAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44155645 73 - 99891981 ATATATATGG-ACATAATATTATGGTCTGAAGAAT-ATTTAGGTAAATTTATACCTCATATGATCAGAAGAACAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382157 73 + 185818997 ATTTATGTGG-ACATAATATTATGGTCTGAAGAAT-ATTTGCGTAAATTTATCCCTCATATGATCAGAAGAACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027908 73 - 192294377 ATTTATGTGG-ACATAATATTATGGTCTGAAGAAT-ATTTGCGTAAATTTATCCCTCATATGATCAGAAGAACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 374990 73 - 3123512 ATTTATGTGG-ACATAATATTATGGTCTGAAGAAT-ATTTGCGTAAATTTATCCCTCATATGATCAGAAGAACAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7608644 73 - 10077455 ATTTATGTGG-ACATAACATTATGGTCTGAAGAAT-ATTTGCGTAAATTTATCCCTCATATGATCAGAAGAACAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546426 73 - 127223203 ATTTATGTGG-ACATAACATTATGGTCTGAAGAAT-ATTTGTGTAAATTTATCCCTCATATGATCAGAAGAACAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678282 73 + 1799296 ATTTATATGG-ACATAGCATTATGGTCTGAAGAAT-ATTTGCGTAAATTTATCCCTCATATGATCAGAAGAACAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5214675 73 - 6934359 ATTTATATGG-ACATAATATTATGGTCTGAAGAAT-ATTTATGTAAATTTATCCCTTATATGATCAGAAGAACAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20093737 73 + 128169293 ATTTATATGG-ACATAATATTATGATCTTCAGAGT-ATGCAGGTAAACTTATCCTGCATATGATCAGAAGATGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674279 73 + 18371965 ACTTATATGG-ACATAATACTATGATCTACAGAGT-ATGTAGGTAAACTTATCCCTCATATGATCAGAAGATGAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209052 73 - 3566421 ATTTATATGG-ACATAATATTGTGACCTGCAGCAT-ATGTAGGTAAACTTATCCCTCATATGATCAGAAGACGAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7404632 70 + 9267652 ATTTATATGG-ACATAATA---TGATCTGCAGAGT-ATGTAAGTAAACTTATCCCTCTTATGATCAGAAGACAAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649917 71 - 14340318 ATTACTATGG-ACAT---ATTATGATCTGAAGAATGATTTAGGTAAGTTTATTTCTCATATGATCATAAGACCAG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4118520 44 + 55844845 atatatatGGCATATAAAATC-----------AGT-AT--------GTTTATCTATTGTATCAA----------- i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 318489 72 - 1446996 ATTTAAATGT-ACAT-ATATTATGATCTATAGAGT-TTAAATGTAAACGTGTCCTTCCTATGATCGTAAAATCAA i dasNov3.JH578441 I 360 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=896380.000000 s hg38.chr14_KI270725v1_random 131252 101 + 172810 TGCAAGATAG-T-TTATATCTGAAAGG--AAAAAAA----------TCTTTATATGGTTCTGAAAGCGTAAATC-ATTAACAATTTGGATAATAATTAGCATAAAAATACACAAAC s gorGor5.CYUI01000522v1 114584 101 + 126596 CGCAAGATAG-T-TTATATCTGAAAGG--AAAAAAA----------TCTTTATATGGTTCTGAAAGCGTAAATC-ATTAACAACTTGGATAACAATTAGCATAAAAATACACAAAC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5701709 100 + 72422247 TGCAAGATAG-T-TTATATCTGAAAGG--AAAAAAA----------TCTTTATATGGTTCTGAAAGCCTAAATC-ATTAACAACTTGGATAATAATTAGCATAAAAATAGA-AAAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44155718 101 - 99891981 TGCAAGACAG-T-TTATATCTGAAAGG-AAAAAAAA----------TCTTTAT-TGGTTCTGAAAGCCTAAATC-ATTAACAACTTGGATAATAATTAGAATAAAAATACACAAAT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382230 102 + 185818997 TGCAAGATAG-T-TTATATCTGAAAGG-AAAACAAA----------TCTTTATATGGTTCTGAAAGCCTAAATC-ATTAACAACTTATATAATAATTAGAATAAAAATACACAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125027981 102 - 192294377 TGCAAGATAG-T-TTATATCTGAAAGG-AAAAAAAA----------TCTTTATATGGTTCTGAAAGCCTAAATC-ATTAACAACTTATATAATAATTAGAATAAAAATACACAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375063 102 - 3123512 TGCAAGATAG-T-TTATATCTGAAAGG-AAAAAAAA----------TCTTTATATGGTTCTGAAAGCCTAAATC-ATTAACAACTTATATAATAATTAGAATAAAAATACACAAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7608717 102 - 10077455 TGCAAGATAG-T-TTATATCTGAAAGG-AAAAAAAA----------TCTTTATATGGTTCTGAAAGCCTAAATC-ATTAACAACTTGTATAATAATTAGAATAAAAATACACAAAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546499 103 - 127223203 TGCAAGATAG-T-TTATATCTGAAAGGAAAAAAAAA----------TCTTTGTATGGTTCTGAAAGCCTAAATC-ATTAACAACTTGTATAATAATTAGAATAAAAATACACAAAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678355 102 + 1799296 TGCAAGATAG-T-TTATATCTGAAAGG-AAAAAAAA----------TCTTTATATGGTTCTGAAAGCCTAAATC-ATTAACAACTTGTATAATAATTAGAATAAAAATACACAAAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5214748 103 - 6934359 TGCAACATAG-T-TTATATCTGAAAGGAAAAAAAAA----------ACTTTATATGGTTCTGAAAGTCTAAATC-ATTAACAACTTGTATAATAATTAGAATAAAAATACACAAAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20093810 102 + 128169293 AATAAGATAG-T-TTATATCTCAAAGG-AAAAAAAA----------TCTATACATGGTTTTGAAAGCCCAAATG-ATTAACAAATGAAATAATAATTAGAATAAAAATACACAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674352 103 + 18371965 GGCAAGATAG-T-TTATATCTCAAAGGAAAAAAAAA----------TCTATGCATGGTTTTGAAAGCATAAACC-ATTAACAAATGAAATAATAATTAGAATAAAAATACAGAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209125 103 - 3566421 GGCAAGATAG-T-TTATATCTCAAAGGAAAAAAAAA----------TCTATACATGGTTTTGAAAGCCTAAATC-ATTAACAAATGAAATAATAATTAGAATAAAAATACACAAAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7404702 102 + 9267652 GGCAAGAGAG-T-TTATATCTCAAAGG-AAAAAAAA----------TCTATACATGGTTTGGAAACCCTAAATC-ATTAACAAATGAAATAATAATTAGAATATAAATACACAAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1649988 102 - 14340318 GGCAAAATAGTT-TTATATCTGAAAGA-AAAAGAAA----------TCCATATACTATTGTGAAAGCCCAAATC-ATTAGTAACTTGGATAACAATAGGAATAAAAGTACACAAA- i otoGar3.GL873564 C 0 C 0 s dasNov3.JH578441 318561 114 - 1446996 GGTGAAACAT-TCTTATTTGTGAAAGG-AAAAAAAAAAACAACAATTCCATTTGTGTGCATAAGAAACTTCATCTTTTAGCAATCTGGTTAAGAATTAAAATAGCCATACATGGAA i dasNov3.JH578441 C 0 C 0 e canFam3.chr18 4118564 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=1633256.000000 s hg38.chr14_KI270725v1_random 131353 191 + 172810 ATGCCCTCTTCCTATCTGTAAGTAC------AAAGTGACAACAGAATC-AAAGCATGTGGCTATGTGCATGTTTATATTTCAAGACGCAGAGCACC--CTATTCCTCTTCTCTGCCCTTTCTAGTTGGCACAATTCCTCATGAATCTAAGTGCAGCCATAGGGTGGATTACGGTGACCTGCCATTTGTATGGAACTG---ATC s gorGor5.CYUI01000522v1 114685 190 + 126596 ATGCCCTCTTCCTAGCAGTAAGTAC------ACAGTGAAAACAGAATC-AAAGCATGTGGCTATGTGCATGTTTATATTTCAAGACGCAGAGCACT--CTATTCCTCCTCTCTGCCCTTTCTAGATGGCACAATT-CTCATGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATTTGTATGCAACTG---ATC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5701809 152 + 72422247 ATGCCCTCTTCCTTGCAGTAAGTAC------ACAGTGACAACAGAATC-AAAGCATGTGGC-----------------------------------------TCCTCTTCTCTGCCCTTTCTAGATGGCACAATTCCTCATGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATTTGTATGCAACCG---ATC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44155819 191 - 99891981 ATGCCCTCTTCCTAGCAGTAAGTAC------ACAGTGACAACAGAATC-AAGGCATGTGGCTATGTGCATGTTTATATTTCAAGATGCAGAGCACT--CTATCCCTCTTCTCTGCCCTTTCTAGATGGCACAATTCCTCAGGAATCTATGTGCAGTCGTAGGGTGGATTAGGGTGACCTGCCATTTGTATGCAACTG---ATC i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382332 196 + 185818997 CTGCCCTCTTCCTAGCAGTAAGTACACAGTGACAGTGACAACAGAATC-AAAGCACGTGGCAATGCGCATGTTTATATTCCAAGATGCGGAGCATT--CTATTCCTCTTCTCTGTCCTTTCTAGATGGCACAATTCCTCAGGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGTATA-AATTG---ATC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028083 196 - 192294377 CTGCCCTCTTCCTAGCAGTAAGTACACAGTGACAGTGACAACAGAATC-AAAGCACGTGGCAATGCGCATGTTTATATTCCAAGATGCGGAGCATT--CTATTCCTCTTCTCTGTCCTTTCTAGATGGCACAATTCCTCAGGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGCATA-AATTG---ATC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375165 196 - 3123512 CTGCCCTCTTCCTAGCAGTAAGTACACGGTGACAGTGACAACAGAATC-AAAGCACGTGGCAATGCGCATGTTTACATTCCAAGATGCGGAGCATT--CTATTCCTCTTCTCTGTCCTTTCTAGATGGCACAATTCCTCAGGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGTATA-AATTG---ATC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7608819 190 - 10077455 ATGCCCTCTTCCTAGCAGTAAGTAC------ACAGTGACAACAGAATC-AAAGCATGTGGCAATGTGCATGTTTATATTCCAAGATGCGGAGCACT--CTATTCCTCTTCTCTGTCCTTTCTAGATGGCACAATTCCTCATGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGTATA-AATTT---ATC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546602 190 - 127223203 ATGCCCTCTTCCTAGCAGTAAGTAC------ACAGTGACAACAGAATC-AAAGCATGTGGCAATGTGCATGTTTATATTCCAAGATGCGGAGCACT--CTATTCCTCCTCTCTGTCCTTTCTAGATGGCACAATTCCTCATGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGTATA-AATTG---ATC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678457 190 + 1799296 ATGCCCTCTTCCTAGCAGTAAGTAC------ACAGTGACAACAGAATC-AAAGCATGTGGCAATGTGCATGTTTATATTCCAAGATGCGGAGCACT--CTATTCCTCTTCTCTGTCCTTTCTAGAAGGCACAATTCCTCATGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGTATA-AATTG---TTC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5214851 190 - 6934359 ATGCCCTCTTCCTCGCAGTAAGTAC------ACAGTGACAACAGAATC-AAAGCATGTGGCAATGTGCATGTTTGTATTCCAAGATGCAGAGCACT--CTATTCCTCTTCTCTGTCCTTTCCAGATGGCACAATTCCTCATGAATCTAAGTGCAGTCATAGGGTGGATTAGGGTGACCTGCCATCTGTATA-AATTG---ATC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20093912 191 + 128169293 ATGCGCTCTTCCTAGCAGTAAATAC------ACAGTGACAACACATTCAAAAGCATGTGACTATGTGCACGTTTACATTCCAAGATGCAGGGTACT--CTATTCCTCTCCTCTGCTCTTTCTAGAT-GCACAATTCCTTGTGAATCTAAGTGCAGTCATAGGGTGGATTAGGATCTCCTGTCATTTCTGTGCAATTG---TTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674455 191 + 18371965 ATGCACTCTTCCTAGCAGTAAAGAC------ACA-TGACGGCACATTCGAAAGCACGTAGGGATGTACATGTTTACATTCCAAGATGCAGGGTACT--CTATTCCTCTCCTCCGCTCTTTCTAGACAGCACAATTCCTTCTGAATCTAAGTGCAGTCATGGGGTGGATTAGGATGTCCTATCATTTCTGTGCAATTG---TTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209228 192 - 3566421 GTAGGCTCTTCCTAGCAGTAAACAC------ACAGTGACAACACATTCAAAGGCATGTGGCGATGTGCATGTTTACATTCCAAGATGCAGGTTACT--CTATCCCTGTCCTCTGCTCTTTCTAGACAGCACAATTCCTCGTGAATCTAAGTGCAGTCATAGGGTGGATTAGGATCTCCTGTCATTTCTGTGCAATTG---TTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7404804 192 + 9267652 ATGCTCTCTTCCTAGCAGTAAATAC------ACAGTGACAACACATTCAAAAGCATGTGGCTATGTGCATGTTTACATTCCAAGATGCAGGGTACT--CTATTCCTCTCCTCTGTTCTAGAAAGAAAGCACAATTCCTCGTGAATCTAAGTGCAGTCACAGGGTGGATTAAGATCTTCTGTCATTTCTGTGCAATTG---TTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1650090 184 - 14340318 ATGCCTATTTCCCAGCCATAAATGT------TCCGTGAGCACATAATC-AAAGGGCATAGCTGTATGTGCTTTCTTATTCTCAGACATCGAGCACCCACCACTCCTCTCCACT--CTTTTCTAGATGACACAGTTCCTCATTGATCTCAGTGCAGTCGTCAGATG----------CTCTGCTGTTTCTATGTAACTGCTTTTC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4118564 186 + 55844845 ATACCCTCTTTTAAGCTGTAAAAAT------AGGATGATAATA----C-AAAGCATATGCCTGCATCCATTTTTATGTTCCAAGAAGCAGCACACT--CTATTCCTTTTCTCTGCTCACTCTAGATGATACAGTTTTTCATAAATCAAAGTACAATCATAGGATAAAGCAGGG-GTTTTGATATTTGTATGGAACTG---CTC i canFam3.chr18 C 0 C 0 s dasNov3.JH578441 318675 184 - 1446996 ATGT-TTTGTCTCAGAAGTATAAAT------CCATTGAGAACACA-CC-TCACCCTATAGTGGTGTGCATTTTTACCTCCCAGGATAGAAAACAC---CTATTCTGCATCTCTTTGCACCCTCTGTGATTCAG---CTCAAGAATCTAAGTGCA-TCTCAGGGTAGAGAAAGGTGTGCTGCTATTTGTATGCAATTA---CTC i dasNov3.JH578441 C 0 N 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=911810.000000 s hg38.chr14_KI270725v1_random 131544 131 + 172810 TC------TATTTTGGAAGTAATTAATGT---AAAAATATATTTTTAAAAGATAAG---TTCAAAT--------TTCAGGGCAAACTAG-CATGGTTTCACCCCTTTTCTTTGTAACATTTTTTCTAATGTTGGAAAA-GTAAGATAGGCTTT s gorGor5.CYUI01000522v1 114875 131 + 126596 TC------TATTTTGGAAGTAATTAATGT---CAAAATAGATTTTTAAAAGATAAT---TTCAAAT--------TTCAGGGCAAACTAG-CATGGTTTCAGCCCTTTTCTTTGGAACATTTTTTCTAAGGTTGGAAAA-GTAAGGTAGGCTTT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5701961 131 + 72422247 TC------TATTTTGGAAGtaattaatgt---aaaaatatatttttaaaagataat---ttCAAAT--------TTCAGGGCAAACTAG-CATGGTTTCACCCCTTTTCTTTGTAACATTTTTTCTAAGGTTGGAAAA-GTAAGGTAGGCTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156010 131 - 99891981 TC------TATTTTGGAAGTAATTAAAGT---AAAAATATATTTTTAAAAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGGTTTCACCACTTTACTTTGTAACACTTTTACTAAGGTTGGAAAA-GTAAGGTAGGCTTT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382528 127 + 185818997 TC------CATTTTGGAAG----TAAAGT---GAAAATATATTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTCTTTGTACCAGTTTTTCTAAGGTTGGGAAA-GTAAGGTAGGCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028279 127 - 192294377 TC------CATTTTGGAAG----TAAAGT---GAAAATATATTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTCTTTGTACCAGTTTTTCTAAGGTTGGGAAA-GTAAGGTAGGCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375361 127 - 3123512 TC------CATTTTGGAAG----TAAAGT---GAAAATATATTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTCTTTGTACCAGTTTTTCTAAGGTTGGGAAA-GTAAGGTAGGCTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609009 126 - 10077455 TC------CATTTTGGAAG----TAAAGT---GAAAATATATTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTC-TTGTTCCAGTTTTTCTAAGGTTGGGAAA-GTAAGGTAGGCTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546792 127 - 127223203 TC------CATTTTGGAAG----TAAAGT---GAAAATATATTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTCTTTGTTCCAGTTTTTCTAAGGTTGGGAAA-GTAAGGTAGGCTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678647 97 + 1799296 TC------CATTTTGGAAG----TAAAGT---GAAAATATATTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTCTTTGTACCAG-------------------------------TTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215041 127 - 6934359 TC------CATTTTGGAAG----TAAAGC---AAAAATATGTTTTTGAGAGATAAT---TTCAAAT--------TTCAGTGCAAACTAG-CATGTTTCCATCCCTTTTCTTTGTACCAGTTTTTCTAAGGTTGGAAAA-GTAAGGTAGGCCTT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094103 131 + 128169293 TC---TTTCACTCTGGAGGTAATTAAAAC---AAAAATATATTTTAGAAACACGAT---TTCCAAT--------TGCAGTGCAAATTAG-CATGTTTTTA---CTTGTCCCTGTAACAGATTTTCTAATGTTGGAAAA-ATAAGGTAGGCTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674646 131 + 18371965 TC---TTTCGCTCTGGAGGTAATTAAAGC---AAAAATATATTTTAGAAAGACGAT---TTCCAAT--------TGCAGTGCAAACTAG-CATGTTTTTA---CTCGTCCCTGTAACGGATTTTCTAATGTTGGAAAA-ACAAGGTAGGCTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209420 131 - 3566421 TC---TTTCACCCTGGAGGTAATTAAAGC---AAAAATATATTTTAGAAAGACGAT---TTCCAAT--------TGCAATGCAAACTAG-CATGTTTTTA---CCTGTCCCTGTAACAGATTTTATAATGTTGGAAAA-ATAAGGTAGGCTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7404996 131 + 9267652 TC---TTTTACTCTGGAGGTAATTAAAGC---AAAAATATATTTTAGAAAGACAAT---TTCCAAT--------TGCAGTGCAAACTAG-CATGTTTTTA---CTCGTCCCTGTAACAGATTTTCTAATGTTGGAAAA-ATAAGGTAGACTTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1650274 138 - 14340318 TC---TTTAGCTCTTGAGG----TAAAGA---GAAATTACATTTAAAAAATAAAATGCATGCAGACCAGGTACATGGACTGCAAACACGTTACGTTTTCACCAAATGGGTTTGCAACAGCTTTTCTAATGTTGGAA-----AGGATAAGTTTT i otoGar3.GL873564 C 0 I 497 s canFam3.chr18 4118750 141 + 55844845 TTCTCTTTAGCTTTTGAGGTAATGAAGGCAAAAAAAAAAAAATTTAAGCATAAAAT---TTTAGAT--------TACAATGCAAACTAG-TATGTTTTCACCCATTCTGGTTGTCCCAGCTTCTCTAACACAAAAAAATATGAAATAGCCTTT i canFam3.chr18 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=168246.000000 s hg38.chr14_KI270725v1_random 131675 20 + 172810 AGTACGATTTTAAATAATAA s gorGor5.CYUI01000522v1 115006 20 + 126596 AGTACGATTTTAAATAATAA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702092 20 + 72422247 AGTAAGATTTTTAATAATAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156141 20 - 99891981 AGTACGATTTTTAATAATAA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382655 20 + 185818997 AGTATGATTTTTAATAATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028406 20 - 192294377 AGTATGATTTTTAATAATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375488 20 - 3123512 AGTATGATTTTTAATAATAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609135 19 - 10077455 AGTACAA-TTTTAATAATAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546919 20 - 127223203 AGTACAATTTTTAATAATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678744 20 + 1799296 AGTACATTTTTTAATAATAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215168 20 - 6934359 AGTATGATTTTTAATAATAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094234 20 + 128169293 AGTATGATTTTTGATTATAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674777 20 + 18371965 AGTATGATTTTTGATTATAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209551 20 - 3566421 AGCATGATTTTTGATTATAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7405127 20 + 9267652 AGTATGATTTTTGATTATAA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 4118891 20 + 55844845 AGTGTGATTTTTGATAATAA i canFam3.chr18 C 0 C 0 e otoGar3.GL873564 1650412 497 - 14340318 I e panTro5.chr1 126709900 54727 + 228573443 I a score=20424.000000 s hg38.chr14_KI270725v1_random 131695 2 + 172810 GT s gorGor5.CYUI01000522v1 115026 2 + 126596 GT i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702112 2 + 72422247 GT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156161 2 - 99891981 GT i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382675 2 + 185818997 GT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028426 2 - 192294377 GT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375508 2 - 3123512 GT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609154 2 - 10077455 GT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546939 2 - 127223203 GT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678764 2 + 1799296 GT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215188 2 - 6934359 GC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094254 2 + 128169293 GT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674797 2 + 18371965 GT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209571 2 - 3566421 GT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7405147 2 + 9267652 GT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1650909 2 - 14340318 gt i otoGar3.GL873564 I 497 C 0 s canFam3.chr18 4118911 2 + 55844845 CT i canFam3.chr18 C 0 I 201 e panTro5.chr1 126709900 54727 + 228573443 I a score=927886.000000 s hg38.chr14_KI270725v1_random 131697 103 + 172810 TTTCAAAGTGAGACGCAAAATGGTGGCGCCAACACATTTCAAATCTGCTACATTTTGAATACACTTATTGGAGAAAAGACCTTCTCATCATTTTTCTCTTACA s gorGor5.CYUI01000522v1 115028 103 + 126596 TTTCAAAGTGAGACGCAAAATGGTGGCACCAACACATTTCACATCTGCTACGTTTTGAAGACACTTATTGGAGAAAAGACCTTCTCATCATTTTTCTCTTACA i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702114 103 + 72422247 TTTCAAAGTGAGACGCAAAATGGTGGCGCCAACACATTTCAAGTCTGCTACATTTTGAATACACTTATTGGAGAAAAGACCGTCTCATCATTTTTCTCTTACA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156163 103 - 99891981 TTGCAAAGTGAGACACAAAATGGTGGCGCCAACACATTTCAAGTCTGCTACATTTTGAACACACTTATTGGAGAAAAGACCTTCTCATCATTTTTCTCTTACA i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382677 103 + 185818997 TTTTAAAGTGAGACACACAATGGTGGAGCCAACATATTTCAAGTCTGCTACATTTTGAGTACACTTACTGGAGAAAAGAACTTCTCATCATTTTTCTCTTACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028428 103 - 192294377 TTTTAAAGTGAGACACACAATGGTGGAGCCAACATATTTCAAGTCTGCTACATTTTGAGTACACTTACTGGAGAAAAGAACTTCTCATCATTTTTCTCTTACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375510 103 - 3123512 TTTTAAAGTGAGACACACAATGGTGGAGCCAACATATTTCAAGTCTGCTACATTTTGAGTACACTTACTGGAGAAAAGAACTTCTCATCATTTTTCTCTTACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609156 103 - 10077455 TTTCGAAGTGAGACACAAAATGGTGGAGCCAACATATTTCAAGTCTGCTACATTTTGAATACACTTACTGGAGAAAAGAACTTCTCATCATTTTTCTCTTACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121546941 103 - 127223203 TTTCAAAGTGAGACACAAAATGGTGGAGCGAACATATTTCAAGTCTGCTACATTTTGAATACACTTACTGGAGAAAAGAACTTCTCACCATTTTTCTCTTACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678766 103 + 1799296 TTTCAAAGTGAAACACAAAATGATGGAGCCAACATATTTCAAGTCTACTACATTTTGAATACACTTACTGGAGAAAAGAACTTCTCATCATTTTTCTCTTACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215190 103 - 6934359 TTTCAAAGTGAGACACAAAATGGTGGAGCCAACATATTTCAAGTCTGCTACATTTTTAATACACTTACTGGAGAAAAGAACTTCTCATCATTTTTCTCTTACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094256 103 + 128169293 TTTCAAAGTGAGGCACAAAATAGTGGCACCAACATATTTGAAGTCTGCTACATTTTGAACACACGTCCTAAAGAAAATATATTCTCATCATTTTTCTCTTGTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674799 98 + 18371965 TTTCAAAGTGAGGCAC-AAATCGTGACACCAACACATTTGAAGTCTGCTACGTTTTGAACACA----CTAAAGAAAATATATTCCCATCATTTTTCTCTTGTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209573 102 - 3566421 TTTCAAAGTGAGGCACAAAATCGTGGCACCAACACATTTG-AGTCTGCTACATTTTGAACACACTTACTAAAGAAAATATATTATCATCATTTTTCTCCTGTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7405149 103 + 9267652 TTTCAAAGTGAGGCACAAAATCGTGGCAACAACACATTTGAAGTCTACTACATTTTGAATACACATACTAAAGAAAATATATTCTCATCATTTTTCTCTCGTA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1650911 103 - 14340318 tacaAAAATGAGACACAAAATGGTGGCACTGACACATTTAAAGTCTGCTATGCTTTGAATATACTTTCTAATGAAAGTGTCTTTGTAGCATAGCCCTCTGGTA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 4119114 98 + 55844845 TTTTAAAGTGAGATACAAAATGG-AGTACTAATGCATTTAAATTCTGCTACACTTTGAATACACTTATT----AACATGTCTTTGAATCACTTTATTTTTATA i canFam3.chr18 I 201 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=682375.000000 s hg38.chr14_KI270725v1_random 131800 86 + 172810 GGAAAGGAAATAACATGTAcagttgacccttaagcaacacggaggtt-ggggtgctgg-cccccctgcacagtagaaaatccac-tata s gorGor5.CYUI01000522v1 115131 85 + 126596 GGAAAGGAAATAACATGTAcagttgacccttaagcaacatggaggtt-ggggtgctgg--ccccctgcacagtagaaaatccac-tata i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702217 86 + 72422247 GGAAAGGAAATAACATGTAcagttgacccttaagcaacacggaggtt-ggggtgctgg-cccccctgcacagtagaaaatccac-tata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156266 88 - 99891981 GGAAAGGAAATAACAGGTAcagttgacacttaagcaacacggaggttaggggtgctggccccccccgcacagtagaaaatccac-tata i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382780 87 + 185818997 GGAAAGGAAATAACATGTAcagttgaaccttaagcaacacggaggttaggggtgctgg-cccccttgcaccatagaaaatccac-taca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028531 87 - 192294377 GGAAAGGAAATAACATGTAcagttgaaccttaagcaacacggaggttaggggtgctgg-cccccttgcaccatagaaaatccac-taca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375613 87 - 3123512 GGAAAGGAAATAACATGTAcagttgaaccttaagcaacatggaggttaggggtgctgg-cccccttgcaccatagaaaatccac-taca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609259 87 - 10077455 GGAAAGGAAATAACATGTAcagttgaaccttaagcaacacggaggttaggggtgctgg-ctcccttgcaccatagaaaatccac-tata i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547044 87 - 127223203 GGAAAGGAAATAACATGTAcagttgaaccttaagcaacacggaggttaggggtgctgg-cccccttgcaccatagaaaatccac-tata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678869 87 + 1799296 GGAAAGGAAATAACATGTAcagttgaaccttaagcaacacggaggttaggagtgctgg-cccccttgcaccatagaaaatccac-taca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215293 87 - 6934359 GGAAAGGAAATAACATGTATagttgaaccctaagcaacacagaggttaggggtgctgg-cccccttgcaccataaaaagtccac-tcta i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094359 86 + 128169293 GGAAAGGAGATATCATGTAcagttgacccttaagcaactaagaggtt-aagggtccag-ccctcccactcagtagaaaatctac-tata i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674897 86 + 18371965 GGAAAGGAAATATCATGTAcagttggcccttaagcaacacagaggta-ggggtgccag-ccctcctgctcagtagaaaatctac-tata i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2209675 86 - 3566421 GGAAAGGAAATATCGCGTAcagttgacccttaagcaacacaaaggtt-aggggtacag-ccctcctgctcagtagaaaatctac-tata i cebCap1.NW_016107540v1 C 0 I 774 s aotNan1.NW_018514471v1 7405252 85 + 9267652 GGAAAGGAAATATCATGTAcagttgacccttaagcaacacagaggtt--ggggtccag-ccctcctgctcagtagaaaatctac-tata i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1651014 67 - 14340318 GTACCACAAATAACATGTAcaggt--------------------gttaggggtgctga-tgctc-tgcacagttgaaaatccatgtata i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 4119212 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=925855.000000 s hg38.chr14_KI270725v1_random 131886 112 + 172810 actttgactcccccaaaacttaactactaatagacta-------ctctaagccttacaaataaca----cagtcaattaacccatatttaatat--gttatatgtcttatatactgtattctt-------aa s gorGor5.CYUI01000522v1 115216 116 + 126596 actttgactcccccaaaacttaactactaatagccta-------ctgtaagacttacaaataaca----cagtcaattaacacatatttaatat--gttatatgtcttatatactgtattctt---aacaaa i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702303 120 + 72422247 actttgactcccccaaaacttaactactaatagccta-------ctttaagccttacaaataacacaagcagtcagttaacacatatttaatat--gttatatgtcttatatactgtattctt---aacaaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156354 117 - 99891981 actttgactcccccaaaacttaactattaatagccta-------ctggaagccttacaaataacacaagcagtcaattaacacatatttaatat--gctatatctcttatatactgtattctt------aaa i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382867 125 + 185818997 actttgactcctccaaaatgtaactaccaagagccca-------ctgtaagccttgcaaatcacacaagcagtcaattaacacacatttaatatgagttatatgtcttatatactgtattcttacaaacaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028618 125 - 192294377 actttgactcctccaaaatgtaactaccaatagccca-------ctgtaagccttgcaaataacacacgcagtcaattaacacacatttaatatgagttatatgtcttatatactgtattcttacaaacaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375700 125 - 3123512 actttgactcctccaaaatgtaactacaaatagccca-------ctgtaagccttgtaaataacacaagcagtcaattaacacacatttaatatgagttatatgtcttatatactgtattcttacaaacaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609346 125 - 10077455 actttgactcctccaaaatgtaactaccaatagccca-------ctgtaagccttacaaataacacaagcagtcaattaacacatatttaatatgagttatatgtcttatgtactgtattcttacaaacaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547131 125 - 127223203 actttgactcttccaaaatgtaactaccgatagccca-------ctgtaagccttacaaataacacaagcagtcaatgaacacatatttaatatgagttatatgtcttatgtactgtattcttacaaacaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 678956 125 + 1799296 actttgactcctccaaaatgtaactaccaatagccca-------ctgtaagccttgcaaataacacaagcagtcaattaacacacttttaatgtaagttatatgtcttatatactgtattcttacaaacaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215380 125 - 6934359 actttgactcctccaaaatgtaactaccaatagccca-------ctgtaagccttacaaataacacaagcagtcaattaacacatatttaatatgagttatatgtgttacatactgtattcttacaaacaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094445 123 + 128169293 tcttccactcgcacaaaacttaactactaacagccta-------ctgtaagccttacaaataacataggcagtcaattagcacatatttaatac--gctatatgtatcctatactgtattcttacaaacaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17674983 123 + 18371965 cctttcactcccacaaaacttaactattaatagccta-------ctgtaagccttacaaatcacataggcagtcaattagcacatatttaatat--gctatatgtatcctatacggtattcttacaaacaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2210535 123 - 3566421 actttcactcccacaaaacttacctacaaacagccta-------ctgtaagccttacaaataacataggcagtcaattagcacatatttaatat--gctatatgtatcctatactgtattcttgcaactaaa i cebCap1.NW_016107540v1 I 774 C 0 s aotNan1.NW_018514471v1 7405337 120 + 9267652 actttgactcccacaaaacttaactacaaatagccta-------ctgtaagccttacaaataacataggcagtcaattagcacatatttaatat--gc--tatgtatcctatactgtattcttacaaacaa- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1651081 112 - 14340318 acttttgattctcctcagcttaactgcaaacagtccactgacatctgaaggctttactgatggc------------------cattctttgtat--tttgtatgtactgcacgctgtattcttacagtaaag i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 4119212 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=4241.000000 s hg38.chr14_KI270725v1_random 131998 1 + 172810 c s gorGor5.CYUI01000522v1 115332 1 + 126596 c i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702423 1 + 72422247 c i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156471 1 - 99891981 c i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382992 1 + 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028743 1 - 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375825 1 - 3123512 t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609471 1 - 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547256 1 - 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 679081 1 + 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 5215505 1 - 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094568 1 + 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675106 1 + 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2210658 1 - 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 1651193 1 - 14340318 t i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 4119212 0 + 55844845 C e aotNan1.NW_018514471v1 7405457 0 + 9267652 C e panTro5.chr1 126709900 54727 + 228573443 I a score=757060.000000 s hg38.chr14_KI270725v1_random 131999 93 + 172810 atgccagagaaaaga--aaaaag------aaaatcataag-----gaaaatatatttactaattattaaatggaagtagatgatcaaacaggtcttcatcctcatc s gorGor5.CYUI01000522v1 115333 93 + 126596 atgccagagaaaaga--aaaaag------aaaatcataag-----gaaaatatatgtactagttattaaatggaagtagatgatcaaacaggtcttcatcctcatc i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702424 92 + 72422247 atgccagagaaaa-c--aaaaag------aaaatcataag-----gaaaatatatttactagttattaaatggaagtagatgatcaaacaggtcttcctcctcacc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156472 91 - 99891981 atgccagagaaaa-g--aaaaat------aaaatcataag-----gaaaatatatttcctagttattaaatgcaagtagatgatcaaa-aagtcttcatcctcatc i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52382993 90 + 185818997 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatattcactagttattagatggaagtagatcatcaaaaaggtcttcatcctca-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028744 92 - 192294377 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatattcactagttattagatggaagtagatcatcaaaaaggtcttcatactcatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375826 92 - 3123512 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatattcactagttattagatggaagtagatcatcaaaaaggtcttcatcctcatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609472 92 - 10077455 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatattcactagttattagatggaagtagatcatcaagaaggtcttcatcctcatc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547257 92 - 127223203 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatgttcactagttattagatggaagtagatcatcaaaaaggtcttcatcctcatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 679082 92 + 1799296 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatattcactagttattagatggaagtagatcatcaaaaaggtcttcagcctcatc i manLeu1.NW_012105809v1 C 0 N 0 s colAng1.NW_012115910v1 5215506 92 - 6934359 aagccagagaaaa-g--aaaaag------aaaatcataag-----gaaaatatattcactagttattagatggaagtagatcatcaaaaaagtcttcatcctcatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094569 96 + 128169293 atctcagagaaaa-g--aaaaagtaaa--aaaatcataag-----aaaaatatatttactagttattaaatggaagtagatcatcataaaggtcttcagcctcatc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675107 96 + 18371965 aaatcagacaaaa-g--aaaaagtaag--aaaatcataag-----gaaaatatatttactagtagttaaatggaagtagatcatcatgaaggtcttcagcctcagc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2210659 98 - 3566421 aagtcagagaaaa-gaaaaaaagtaag--aaaatcataag-----aaaaatatgtttactacttattaaatggaagtagatcatcataaaggtcttcagcctcatc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7405457 94 + 9267652 --gtcagagaaaa-g--aaaaagtaag--aaaatcataag-----aaaaatatatttactagttattaaatggaaatagatcatggtaaaggtcttcagtcctatc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1651194 101 - 14340318 agactagaacaaa-g--caaatgtaaagtaaaatcataaggtatagaaaatggatttattattctttgagtggaagtggatcatcataaaagtcttcatcctcc-- i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 4119212 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=236330.000000 s hg38.chr14_KI270725v1_random 132092 34 + 172810 -ctttccatggacagggtgtggataaggatgtaga s gorGor5.CYUI01000522v1 115426 34 + 126596 -cttttcatgggcagggtgtggataaggatgtaga i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702516 34 + 72422247 -cttttcatgggcagggtgtggagaaggatgtaga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156563 34 - 99891981 -cttttcatgggcaggatgtggagaaggatgtaga i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52383083 33 + 185818997 --ttttcatgggcagggtgtggagaaggatgtaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028836 34 - 192294377 -cttttcatgggcagggtgtggagaaggatgtaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375918 34 - 3123512 -cttttcatgggcagggtgtggagaaggatgtaga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609564 34 - 10077455 -cttttcatgggcagggtgtggagaaggatgtaga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547349 34 - 127223203 -cttttcatgggcagggtgtggagaaggatgtaga i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 5215598 34 - 6934359 -cttttcatgggcagagtgtggagaaggatgtaga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094665 32 + 128169293 -tacttcatgagcagggtgaggagaaggaggta-- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675203 34 + 18371965 -cgcttcaagagcagggtgaggagaaggaggtaga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2210757 34 - 3566421 -cgcttcatgagcagggtgaggagaagagggtaga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7405551 34 + 9267652 -tgcttcatgagcagggtgaggagaaggaggtaga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 1651295 35 - 14340318 ttttcttttgaaaaggtagaggaggagaagataga i otoGar3.GL873564 C 0 N 0 e canFam3.chr18 4119212 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=297695.000000 s hg38.chr14_KI270725v1_random 132126 44 + 172810 attgttggtttttctaagtggacgtgcacagttcaaacccctgt s gorGor5.CYUI01000522v1 115460 44 + 126596 attgttggttttgctaagtggacgtgaacagttcaaacccctgt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702550 44 + 72422247 attgttggttttgctaagtggacctgcacagttgaaacccctgt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156597 44 - 99891981 attgttggttttgctaagtggatctgcacagttcaaacccctgt i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52383116 44 + 185818997 attgttggttttgctaagtggacctgcacagttcaaacccctgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028870 44 - 192294377 attgttggttttgctaagtggacctgcacagttcaaacccctgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375952 44 - 3123512 attgttggttttgctaagtggacctgcacagttcaaacccctgt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609598 44 - 10077455 attgttggttttgctaagtggacctgcacagttcaaacccctgt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547383 44 - 127223203 attgttgcttttgctaagtggacctgcacagttcaaacccctgt i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 5215632 44 - 6934359 attgttggttttgctaagtggacctgcacaattcaaacccctgt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094697 37 + 128169293 -------gtcttgctaactggaccggcaaagttccaacctctgc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675237 44 + 18371965 attgttggtcttgctaagtggacaggtaaaattccaacctctgt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2210791 44 - 3566421 attgttggtcttgttaagtggagcagcaaagttccaacctctgt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 7405585 44 + 9267652 attgttggtcttgctaagcggaccggcaaagttcaaatctctgt i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 4119212 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=643415.000000 s hg38.chr14_KI270725v1_random 132170 93 + 172810 ggag----caaaggccaactgTATAGCCATTGAATAGTAATTTATTTTTAGAAATTAACCACACTAAAATACTCTTAGAAGGATGCCAAGAAAAAA--A s gorGor5.CYUI01000522v1 115504 92 + 126596 ggtg----caaaggccaactgTATAGCCATTGAATAGCAATTTATTTTTAGAAATTAACCTCACTAAAATACTCTTAGAAGGATGCCAAG-AAAAA--A i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702594 93 + 72422247 ggtg----caaaggccaactCTATAGCCATTGAACAGCAATTTAGGTTTAGAAATTAACCTCACTAAAATGCTCTTAGAAGGATGCCAAGAAAAAA--A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156641 93 - 99891981 tgtg----caaaggccaactgTATAGCCATTGAATAGCAATTTATTTTTAGAAATTAACCTCACTAAAATACTCTTAGAAGGATGCCAAGACAAAA--A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52383160 93 + 185818997 tgtg----caaaggccaactgTATAGCCATTGAATAGCAATTTGTTTTTAGAAATTAGTCTAACTAAAATATTCTTAGAAGGATGCCAAGAAAAAA--A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125028914 93 - 192294377 tgtg----caaaggccaactgTATAGCCATTGAATAGCAATTTGTTTTTAGAAATTAGTCTAACTAAAATATTCTTAGAAGGATGCCAAGAAAAAA--A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 375996 93 - 3123512 tgtg----caaaggccaactgTATAGCCATTGAATAGCAATTTGTTTTTAGAAATTAGTCTAACTAAAATATTCTTAGAAGGATGCCAAGAAAAAA--A i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 7609642 93 - 10077455 tgtg----caaaggccaactgTATAGCCATTGAATAGCAATTTATTTTTAGAAATGAGTCTAACTAAAATATTCTTAGAAGGATGCCAAGAAAAAA--A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547427 93 - 127223203 tgtg----caacggccaactgTATAGCCATTGAATAGCAATTTATTTTTAGAAATGAGTCTAACTAAAATATTCTTAGAAGGATGCCAAGAAAAAA--A i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 5215676 97 - 6934359 tgtaggtttgaaggccaactgTATAGCCATGGAATAGCAATTTATTTTTAGAAATTAGTCTAACTAAAATACTCTTAGAAGGATGCCAAGAAAAAA--A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094734 84 + 128169293 tgtc----caaggatcaactgCATAACCATTGAACAGCAATT--------GAAATTAATTTTACTAAAATAGTCTTAGAAGGATGCCAAGAAAAAA--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675281 92 + 18371965 tgtg----caagggttaactgCATAACCATTGAACAGCAATTGAGTTTTAGAAATTAATCTTCCTAAAATACTCTTAGAAGGATGCCAAGAAAAAA--- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 2210835 93 - 3566421 tgtg----caagggttaactgCATATCCACTGAACAGCAATTGATTTTTAGAAATTAATATTACTAAAATACTCTTAGAAGGATGCCAAGAAAAAAA-- i cebCap1.NW_016107540v1 C 0 N 0 s aotNan1.NW_018514471v1 7405629 93 + 9267652 tgtg----caagggttacctgCATAACCATTGAATGGCAATTGATTTTTAGAAATTAATCTTACTAAAATACTCTTAGAAGGATGCCAAGAAAAAA-A- i aotNan1.NW_018514471v1 C 0 N 0 s canFam3.chr18 4119212 92 + 55844845 GGAA----TAGAGATAGCATCTATATCCATTAAACGGCAATTTATTTCTAGCAATTAATCTTGCAGAAATACTCTTACAAATATGCCAAGGGGAAA--- i canFam3.chr18 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=6006.000000 s hg38.chr14_KI270725v1_random 132263 1 + 172810 A s gorGor5.CYUI01000522v1 115596 1 + 126596 A i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702687 1 + 72422247 A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156734 1 - 99891981 A i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52383253 1 + 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 125029007 1 - 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 376089 1 - 3123512 A i macNem1.NW_012011522v1 C 0 N 0 s cerAty1.NW_012000909v1 7609735 1 - 10077455 A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 121547520 1 - 127223203 A i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 5215773 1 - 6934359 A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 20094818 1 + 128169293 A i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675373 1 + 18371965 A i saiBol1.JH378145 C 0 C 0 e canFam3.chr18 4119304 0 + 55844845 C e panTro5.chr1 126709900 54727 + 228573443 I a score=38014.000000 s hg38.chr14_KI270725v1_random 132264 8 + 172810 TGAATAAG s gorGor5.CYUI01000522v1 115597 8 + 126596 TGAATAAG i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702688 8 + 72422247 TGAATAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156735 8 - 99891981 TGAATAAG i nomLeu3.chr17 C 0 C 0 s rheMac8.chr3 52383254 8 + 185818997 TTAATAAG i rheMac8.chr3 C 0 N 0 s macFas5.chr3 125029008 8 - 192294377 TTAATAAG i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 7609736 8 - 10077455 TGAATAAG i cerAty1.NW_012000909v1 C 0 N 0 s chlSab2.chr21 121547521 8 - 127223203 TGAATAAG i chlSab2.chr21 C 0 N 0 s colAng1.NW_012115910v1 5215774 8 - 6934359 TGAATAAG i colAng1.NW_012115910v1 C 0 N 0 s calJac3.chr8 20094819 8 + 128169293 TAAATAAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 17675374 8 + 18371965 TTAATAAG i saiBol1.JH378145 C 0 C 0 s canFam3.chr18 4119304 6 + 55844845 --AAAAAG i canFam3.chr18 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=2194.000000 s hg38.chr14_KI270725v1_random 132272 7 + 172810 TATTt----tt s gorGor5.CYUI01000522v1 115605 11 + 126596 TATTTTTGGtt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702696 11 + 72422247 TATTTTTGGTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156743 11 - 99891981 TATTTTTGGTT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 125029016 11 - 192294377 CATCCTTGGTT i macFas5.chr3 C 0 C 0 s calJac3.chr8 20094827 7 + 128169293 CATCTTT---- i calJac3.chr8 C 0 N 0 s saiBol1.JH378145 17675382 7 + 18371965 CATCTTT---- i saiBol1.JH378145 C 0 I 4 s canFam3.chr18 4119310 10 + 55844845 GATCTTCAGT- i canFam3.chr18 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=8952.000000 s hg38.chr14_KI270725v1_random 132279 7 + 172810 catctat s gorGor5.CYUI01000522v1 115616 7 + 126596 catctat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702707 7 + 72422247 CATCTAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 44156754 7 - 99891981 CATCCAT i nomLeu3.chr17 C 0 N 0 s macFas5.chr3 125029027 7 - 192294377 CATCCAT i macFas5.chr3 C 0 N 0 s saiBol1.JH378145 17675393 7 + 18371965 CATCCAT i saiBol1.JH378145 I 4 N 0 s canFam3.chr18 4119320 7 + 55844845 GAGTTAT i canFam3.chr18 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=6412.000000 s hg38.chr14_KI270725v1_random 132286 8 + 172810 ttcatcat s gorGor5.CYUI01000522v1 115623 8 + 126596 ttcatcat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702714 8 + 72422247 TTCAtcat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chrUn_GL397889_2 41885 8 - 50530 ttcatcat i nomLeu3.chrUn_GL397889_2 N 0 C 0 s canFam3.chr18 4119327 8 + 55844845 TTTATTAT i canFam3.chr18 C 0 N 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=78777.000000 s hg38.chr14_KI270725v1_random 132294 256 + 172810 ttcatttcattatttcatttcatcatttcatttcctcatttca--tctcatttcatttcatttcatttcatcctttcatttcatcatttcat--------ctcgtcatttcatc---tcattttatcatttcatctcattctttcatttcatcatttcatctcaacatttcatttcatttcatcttttcacttcatctcatcatttcatcatctcatgattttatttcatctcatcatttca-----tttcatcttttcatctca-------tcatttcat s gorGor5.CYUI01000522v1 115631 238 + 126596 ttcatttcattatttcatt---tcatttcatcatttcatttcatttctcctttca--tcatttcatttcatcctttcatttcatcatttcatcatttcacctcatcatttcatctcatcattttatcatttcatttcattctttcatttcatcatttcatatcaa-----catttcatttcatcatttcatttcatctcatcatttcatc-------------atttcatctcatcatttca-------------tttcatctaa-------tcatttcat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702722 266 + 72422247 ttcatttcatttcatcatt---tcatttcatttcctcatttca---------tcatttcatttcatttaatcctttcatttcatcatttcatcatttcatctcatcatttcatt---tcattctttcatttcatttcatcatttcatttcatcatttcatctcaacatttcagttcatttcatcatttcacttcatctcatcatttcaccttttcatctcgtcatttcatttcatcatttcatttcatttcatcttttcatctcatttcatttcatttcaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chrUn_GL397889_2 41893 225 - 50530 ttcatttcatt-----------tcctttcatttcctcatttca---------tcatttcatttcattacatcctttcatttcgtcctttcat--------ctcatcctttcacc---tca-----tcatttcatctcatcatttcatttcatcatttcatttcattctttaatttcatttcctcatttcatttcatcatttcatCTCAACATCTC--------ATTTTATTTCATCATTTTA-----CTTCATCTCATCATTTCA-------TCATTTCAT i nomLeu3.chrUn_GL397889_2 C 0 M 2506 e panTro5.chr1 126709900 54727 + 228573443 I a score=4077.000000 s hg38.chr14_KI270725v1_random 132550 20 + 172810 ttcatcttttcatctcattt s gorGor5.CYUI01000522v1 115869 19 + 126596 ttcatc-tttcatctcattt i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5702988 20 + 72422247 ttcatcatttcatttcattt i ponAbe2.chrUn C 0 C 0 e nomLeu3.chrUn_GL397889_2 42118 2506 - 50530 M e panTro5.chr1 126709900 54727 + 228573443 I a score=16096.000000 s hg38.chr14_KI270725v1_random 132570 209 + 172810 catttcatcaattcatcatttcatctcatctca-tttcacttcatttcattgtttcatttcatttcatcatttcatttcatcacttcatctcaacatttcattgcgtcatttcacttcatctcatttcatcatttcatctcatgatttca-----------------------tttcatttcatcatttca--------------------tcatttcatttatttcatcatttcatcatttgacgtcatgtc s gorGor5.CYUI01000522v1 115888 253 + 126596 cattttatcaattcatcatttcatctcatttcattttcacttcatttcattgtttcatttcatttcatcatttcatttcatcacttcatctcaacatttcatttcgtcatttcatttcatctcatttcatcatttcatctcatgatttcatttcatctcatttcatttcatcttttcatttcatcatttcatctcaattcatttcatcatttcatttcatttatttcatcatttcatcatttgactccatgtc i gorGor5.CYUI01000522v1 C 0 C 0 e ponAbe2.chrUn 5703008 0 + 72422247 C e nomLeu3.chrUn_GL397889_2 42118 2506 - 50530 M e panTro5.chr1 126709900 54727 + 228573443 I a score=104769.000000 s hg38.chr14_KI270725v1_random 132779 709 + 172810 atc------tcatttcatatcatttcatcatttcatcttttcattc--------catcatttcacttcatcatttcatttcatcatttcatttcctcatttcatcatttcatttcatcctttca----------tcattccatc----------------tcatcatttcatcgtt-----tcgtttcattatt---tcatttcagcattt--cttc---tcattgttgcatttcgtcatttc--attatttcatcatttcac-------------ttcatctca--tcatttcatctcatgatttcatctcatctcatttcatcttttcatctcatcatttaatttcatc---atttcatttcatct-----tttcatctcgtcatttcatttgatcatttcatttcatcaattcatttcatcatttcatttcattatttcatcatttaatcatttaacttcatttcatcatttcatcatttcat---atcatttc--ttcatttcaccatttgatcttctcatttcatttcacttcatcatttcatcatttcatttcctcatttcatttcaccatttca--tcatttcatcattccatttcatcatttcattacat---ttcatcatttcact-----------tcatctcatcatttcatctcatgatttcatttcatctcatcatttcatcttttaatctcatttcatttaatcatt---tcgtttcattacaccttttcatttcatttcatcatttcatttcatcatttcat---atcatttcctcaattcat-----catttcatcttttcat s gorGor5.CYUI01000522v1 116141 805 + 126596 atcatatcattatttcgtatcatttcatcatttcatcttttcattccatcatttcatcatttcacttcatcatttcatttcatcatttcatttcctcatttcatcatttcatttcatcctttcatcttgtcatttcatttcatcatttcatttcatcaattcatcatttcatcattccatctcatttcattatttcatcatttaatcatttcacttcatttcatcatttcatttcatcatttcatatcgtttcttcatttcac--catttgatcttttcatttcatttcatttcatttcatcatttca--tcatttcatttcatcatttca-cttatcatttcatttcatc---atttcatttcatttcctcatttcatttcaccctttcatttcatcatttcatttcatcattccatttcatcatttcattac---atttcatcatttcatcatttcacttcatcttatcatttcatc-tttcattgcatcatttcatttcatctcatcatttcatctcatcatttcatttcatctcatcatttcatcttttcatctcctcatttcatttaatcatttcgcttcatttcaccttttcatctcatcatttcatttcatcaattcatcatttaatttcattgtttcatcatttcatcatttcatttcatcatttcatatcatttcctcaattcatcatttcatct--tttcatttcatcatttcatcatttcatttcatcatttcacttcattatttcatttcatttcaccatttcatgtcatcatttcatcatttcatcattccatttcatcatttcat i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5703008 666 + 72422247 --------atttcatcatttcatttcatcatttcatttcctcattt--------cattatttcatttcatcatttcatttcattctttca-----tcatttcatcatttcatttcatcatttca----------tcatttcact----------------tcatcatttcatttcc-----tcatttcattatt---tcatttcatcatttcatttcatttcat-----cgtttcatcatttcatctcatttcatcctttcatttcatttcatcacttcatctca--tcattgcattttgtcatttca--tcattttatttcatcatttcacttcatctcatcatttcatcacgatttcatttcatctcatgatttcatttcatc---tcatttcatcttttcatctcgtcatttaatttcatcatttcatttcatcaattcatcatttcatcatttcatttcatttcattatttcatc-----attgaatcatttcacttcatttca-------------tcatttcgtttcatttcatcatttcata---tcatttcttcatttcatg-----atttga--tcttttca---tttcatttcatcatttcatttcat---ttcatcatttcact----------------tcatcatttcatttcctgatttcatttcacca-----------------------tttcagttcgtcatttcatcatttcatttcatcattccatttcatcatttcatttcatttcatcatttc-----atcatttcatc---tcat-----catttcatcctttcat i ponAbe2.chrUn C 0 C 0 e nomLeu3.chrUn_GL397889_2 42118 2506 - 50530 M e panTro5.chr1 126709900 54727 + 228573443 I a score=196991.000000 s hg38.chr14_KI270725v1_random 133488 440 + 172810 ttcatttcatcatttcatcatttcatttcatcatttca---cttcatt-----atttcatttcatttcaccatttcatgtcatcatttcatcatttcatcatttcatttcatttcaGTGATACATGTATTTAAGTGCTAATGCGATGCCCAGGAGACACCCTATTTCCCTTTGTAAAACACCTCCTTCAACAAAAGGCAACTACTCATGGCTGGCTAAGTCTACAGGGACACCAGCCTCTCTTCAACCACCCAATTTCATTTAGAACCTCAAACAGCACCTCAGTTTCATAAAAACCTAAAACATAAACACAACACTTGGTTGTAAGTGAGCCAACAG----TTATCTCTTTCTCTGCTCAAGGCTTAAGGCCATGTCTCCCCAACTACATTCAGTGGAAGAAAAGA-TCCCCTGGACAAATAAGTTTGAGAATTGTTGTTGCAGGAATTCTC s gorGor5.CYUI01000522v1 116946 452 + 126596 ttcatttcatcctttcatcatttcatctcattatttcatttcttcatttcatcatttcgtttcatttcatcatttcatcatttcatttcatcatttcatcatttcatttcatttcaGTGATACATGTATTTAAGTGCTAATGCGATGCCAAGGAGACACCCTATTTCCCTTTGTAAAACACCTCCTTCAACAAAAGGCAACTTCTCATGGCCGGCTAAGTCTACAGGGATACCAGCCTCTCTTCAACCACCCAATTTCATTTAGAACCTCAAACAGCACCTCAGTTTCATAAAAACCTAAAACATAAACACAGCACTTGGTTGTAAGTGAGCCAACAGTTTCTTGTCTCTTTCTCTGCTCAAGGCTTAAAGCCGTGTCTCCCCAACTACATTCAGTGGAAGAAAAGA-TCCCCTGGACAAATAAGTTTGAGAATTGTTGTTGCAGGAATTCTC i gorGor5.CYUI01000522v1 C 0 C 0 s ponAbe2.chrUn 5703674 419 + 72422247 ttcattatttcatttcatcatttcatctcatcatttta----------------------------------tttcatcatttcatttcatcatttcatcatttcatttcatttcaGTGATAAATGTATTTAAGTGCTAATGTGATGCCCAGGAGACACCCTATTTCCCTTTGTAAAGCACCTCCTTCAACAAAAGGCAACCTCTCATGGCTAGCTAAGTCTACAGGGATACCAGCCTCTCTTCAACCACCCAATTTCATTTAGAACCTCAAACAGCACCTCAGTTTCATAAAAACCAAAAACATAAACACAATACTTGGTTGTAAGTGAGCCAACAGTTTCTTGTCTCTTTCTCTGCTCAAGGCTTAAGGCCGTGTCTCCCCAATTACGTTCAGTGGAAGAAAAGATTCCCCTGGACAAATAAGTTTGAGAACTGTTGTTGCAGGAGTTCTC i ponAbe2.chrUn C 0 N 0 s nomLeu3.chrUn_GL397889_2 44647 435 - 50530 ttcatgtcttcatttcatcattttatcaattcatttca---tttcatc-----atttaatttcatttcataatttcatcaatt-------tcatttcatcatttcatttcaCTACAGTGACACACGTATTTAAGTGCTAATGTGATGCCCAGGAGACACCCTATTTCCCTTTGTATAACACCTCCTTCAACAAAAGGCAACCT-TCATGGCTGCCTAAGTCTACAGGGATACCAGCATCTCTTCAAACACCCAATTTGATTTAGAACCTCAAACAGCACTTCAGTTTCATAAAAACCTAAAACATAAACACAACACTTGGTTGTAAATGGGCCAAAAGTTTCTTGTCTCTTTCTCTATTCAAGGCTTAAGGCCGTGTCTCCCCAACTACATTCAGTGGAAGAAAAGA-TCCCCTGAAAAAA-ACGTTTGAGAACTGTTGTTGCAGGACTTCTC i nomLeu3.chrUn_GL397889_2 M 2506 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=658698.000000 s hg38.chr14_KI270725v1_random 133928 2791 + 172810 AGAACCTTCAAAACACAAATCCTCATCCGCAGGGATCTTCAGGAGGGAGATGGCTGATGCAGCACAACTTTCTTTCACAGGAGTACCTTGCAGAATACAGTATGAGATACAGAAAGGCTGCATTGAGTCTTTTTAATGGCCCGGGCCTTGGTGGGGGTGGGGTAGGAGCTC----------------TGAGTAGGAACATTCAGGTGGCTTTTTTTTTCTCCTTATTGGCAAAACTGTGTGTACACCATGAATGAAGCTGGTCTCCCTTATCCATATCAAAACTAAATCCAAATTAATTGGCTAAATTGGGACTCAACACCTCCAGGAGCCACGCGGCAGAAAGCCCCAACACACTTTGAATTAGCTCACCTCATCATATTTGAGGAAAGCAAAACGCTTATGACCAGTGTGCTGCTAATACAAGTCTACAGATAATGCGGTATGAAAAACTAGTTTTCCCAATCATAGCTGGCATAGTCCACATTTTGCATTACACTTTTCCCCCTTTTTTTAAATTTTAAACACAGGTCTTTCTCTCTTCTTTTtttaaattttaattaaattatacaagac-gagtctcagtatgttgcccaggctggtcttcaactcctgagctcaagcgatacatccgtctccacctcccaaagtgctgagattacacgcctgatacactgtgcctggccttaaacacaaatcttaattCATTCTTACAATTATTCTGAGGTTACAAAAATGGAAGGGGAAGAAAAATGGCAAGCAAATAGGCTGACTTTGGCTTCATTATTTGGAAGGACAGTTTGCTCCGTTAAAACACACTACTGCCTACAAAGGCCAAGACAACAGAAAAATACAGACTTACATAAATAGATTTTATATGTGACAGCAGTTTGAACGGAGACTTTTTCAATGC-AATGAGAAACAGCTGTGCTTGGGAATAAATGACAACGATTTTTTTTTATCT---CAGCTGTCCTGAGAGCATGTCTCTACATCTCTACCTGCATTCTGGAATCAGGGAGAAAGTCAAAACGG---ACAAGACACTAGATcagccgtgtccaaccctttgactacaaggacttttccgcctatctgtggtggtgggtatcatgaaaattatgcaaaaacct-tttgtttttttttaagctcatcagctgttgttagcattagtgtattttatgtgtggcccaggagcattcttcttccaatgtggccctaagaagccaaaatactggacacctgtgCACTAGATCAAAAGGCTACTCCTTCTGGAAGCAACTGTAAAGAATTTCTGACATTATCTTGACATGAAAACCAATAGATAGTGGGACAGAATGCAAAATCTTCAAGAATTTTTCCTGTCttttttttttttttgagtcacggtcttgctctgtggcccaggctggagtacactggtgagctcacagctcagtgcaggatcaagtgctcctcccacctcagccacagtagtagctgggactacagatgtgcacaaccacccctggctaacattttatttttt--------gtagagacagggtctctctatattgtccaggttggtctcaaactccttgactcaagggatccaggacaggataacaggtgggagccaccacacctggccATGTGCATGAACTTTTAAGACAAACAAAAGGCCCCACAAAAGTTAAGGTTTTTCCACCTAATTTCCA-GGGGATCTTTTGGTGCAAGGATGAGAAACCCTTAAAAGTACACAGACAACTCCAAAGATTCAAGACAGTTCATTCGGGCTGAGCCAGCTCACTGGGCAGACTGACCTTCAAAAAAGGCCCACCCATGACATACACCAGATGGCTCTACAAGAATCTCTTCAGTCCTCAGGGTCCCTAAGATACTGGACAGAGATAGGAAAGCAAACCCATTTGCTTCTTCCTGCAGGAAACCCCTTGAGGTCAAGACCCCACAATCAGACAAGGATGGAGTGGCTCACCCTCAGTAAACAGGCCAAACTCAAGGTGGTATAATGTCTTAACCAAGAGTGTGGGCCTCCAGGTCTGACTCCCATCTGAGTTCTCCTTTAATAACCACACTTTGATAATTCTCCTTAACAGGGGTTCCTggcaagtcagttcttcctcaggccttcggtttcctcacctacaagatgagagggctggaccagatgGAAATTCAGGGTGGAAGGGGATGTCCGCGCACAACCCACCACCCCCCCCGACAGGACCCTGGACCCTCCATCCCAGTTCCCACCAGGCACCCGCCCCACAAATGGCGCTCAAGGTGAGGGCTGGTCCCGGGTCCTCCTGCTGCCGCATCAGCGAATGCATGAGGGACGGGAAGACTCCAAGGGCGCAATGCAGGCTCAAGGATGCAACTGGGCCAGGCGTGAACTGGGGCCCCGAGGGAGGTGTCTGAGCTCCTCCTGGAGCCCAGCCCGGGTCCCCGAACCCGTTACCTCCAGGGTCGGTATCTTCTGCTGGGTGAGGTCGTTCGACACAGCGCACTTGGTGCCCAGCCAGCAAAGGCTGCCAATGAAGATGCCAATGAGCTTCTGGAGCTGC-------------------------CCGCGGCCCCTGCGCCACCTTCCGCTAATGCCGCATCACCCCCGCCACCACCCTCCTTCTTCTCTCCCATCGCCTCTGCGCGCAGCGCCGCTCTATGCAGGCCACAGAGGCCGAGGCAGGGAGCCCGGGGCGCCGGCGCCTAGGCAAAGAACCCCCGACCCAGGAGAGCTGTACCAGGAGCGCCCCTCGGCGCTGCCCTTGCCAGGACGCCAGTGGAGCTAGCAGCCGAGTCTGCCGCTCCTGCCCTCAGAGCC s gorGor5.CYUI01000522v1 117398 2814 + 126596 AGAACCTTCAAAACACAAATCCTCATCCGCAGGGATCTTCAGGAGGGAGATGGCTGATGCAGCACAACTTTCTTTCACAGGAGTATCTTGCAGAATACAGTATGAGATACATAAAGGCTGCATTGAGTCTTTTTAATGGCCTGGGCCTTGGTGGGGGTGGGGTAGGAGCTTTCCAGATAGCA-CTAATGAGTAGGAACATTCAGGTGGCTTTTTTTT--TCCTTATTGGCAAAACTGTGTGTACACCACGAATGAAGCTGCTCTCCCTTATCCATATCAAAACTAAACCCAAAGTAATTGGCTAAATTGGGACTCAACACCTCCAGAAGCCACGTGGCA--------CAACACACTTTAAATTAGCTTACCTCATCATATTTGAGGAAAGCAAAACGCTCATGACCAGTATGCTGCTAATACAAGTCTACAGATAATGCTGTATGAAAAAGTGGTTTTCCAAATCATAGCTGGCATAGTCCACATTTTGCATTACAC-TTTCCCCCCTTTTTTATATTTTAAACACAGGTCTTTTTCTCTTCTTTTTTAAAATTTTAATTAAATTATACAagatggagtctcagtacgttgcccaggctagtcttcaactcctgagctcaagcgatacatccatctccgcctcccaaagtgctgagattaccggcctgagacactgtgcctggccTTAAACACAAATCTGAATTCATTCTTACAATTACTCTGAGGTTACAAAAATGGAAGGGGAAGAAAAATGGCAAGCAGATAGGCTGACTTCAGCTTCATTATTTGGAAGGACAGTTTGCTCATTTAAAACACACTACTGCCTACAAAGGCCAAGACAACAGAAAAATACAGACTTACATAAATAGATTTTATATGTGACAGCAGTTTGAATGGAGACTTTTTCAATGC-AATGAGAAACAGCTGTGCTTGGGAATAAATGACAACAA-ATTTTTTTATCTCAACAGCTGTCCTGAGAGCATGTCTCTACATCTCTACCTGTATTCTGGAATCAGGGAGAAAGCCAAAATGGACAACAAGATACTAGATcagccgtgtccaaccctttgactacaaggacttttccgcccatctgtggtggtgggtatcatgaaaatcatgcaaaaactt-----tttttttttaagctcatcagcagtttttagcgttagtgtattttatgtgtggcccaggagcattcttcttccaatgtggccctgagaagccaaaagactggacaccTCTGCACTAGATCAAAAGGCTACTCCTTCTGGAAGCAATTGTAAAGAATTTCTGACATTATCTTGACATGAAAACCAATGGATAGTGGGACAGAATGCAAAATCTTCAAGAATTTTt-ttgtcttttttttttttttgagtcacggtcttgctctgtggcccgggctggagtacactggtgagatcacagctcagtggaggatgaagtgctcttcccgcctcagccacagtagtagctgggactacagatgtgcacaaccacccctggcaagtattttatttttt--------gtagagatggggtctcattatattgtccaggttggtctcaaactccttgactcaagggatccaggacaggataacaggtgggagccaccacacctggccATGAGCATGAACTTTTAAGACAAACACAAGGCCCCACAA-----AATGTTTTCCCACCTAATTTCCAGGGGGATCTTTTGGTGCAAGGCTGACAATCCCTTTAAAGTACACAGACAACTCCAAAGTTTCAAGACAGTTCATTTGGGCTGAGCCAGCCCACTGGGCAGGCTGACCTTCAAACAAGGCCCACGCATGACATACACCAGATGGCTCTCCAAGAATCTCTTCAGTCCTCAGGGTCCCTAAGGTACTGGACAGAGCTAGGAAAGCAAACCCATTTGCTTCTTCCTGCAGGAAACCCCTTGAGCTCAAGACCCTACAATCAGACGAGGATGGAGTGGCTCTCCCTCAGTCAACAGGCCAGACTCAAGGTGGTATAATGTCTTAATCAAGGGTGCGGGCCTCCAGGACTGACTCCCAACTCAGTTCTTCTTTAATAACCACACTTTGTTAATTCTCCTTAACAGGGGTTCCTggcaagtcagttctccctcaggccttcggtttcctcacctacaagatgagaagtctggaccag-TGGAAATTCAGGGGGTAAGGGGATGTTTGTGCACAGCCCACC-CCCACCCCCATGGGACCCTGGAGCCTCCATCCCAGTTTCTACCACGCACTGGCTCCACAAATCCTGCCCAAGGTGAGGGCTGGTCCCAGGTCCTTCGGCTGCCACATCAGCGAGTGCAGGAGGGA-GAGGAGCCTCCAAGGGGGTGATGCGGGCTCAAGGATGCAACTCAGCCAGGAGTGAACTGGGGCCCCAAAGGAGGTGTCCGGGCCACTCGTGGATCCCAGCCCAGGTCCCCGAACCCCTTACCTCCAGGGTCTGTATCTCCTGCTGGGTGAGGTCGTTGGACACAGCGCATTTGGTGCACAGCCCGCATAGGCTGCCAATGAAGATGACGATGAGCTTCTGGAGCTGCCCACAGTGCTGCAGCGCCCAGCTGGCCGCAGCCCCTGCGCCACCCTCCGCGGCTGCCGCATCAACCCTGCCACCGCCCTCCTTCTTCTCTCTCATTGCCTCCGCGCGTAGTGCCGCTCTATGCAGGCCACAAGGGCCTAGGCAGGGACCCCGGGGCGCCGGCGCCTAGGCAAGGAACCCCTGAGCCAGGAGAGCTGGACCAGGAGAGCCCCTCGGCGCTGCCCTTGTCAGGACGCCAGTAGAGGTGGCAGCCGAGTCTGCTGCTCCCGCCCTCAGAGCC i gorGor5.CYUI01000522v1 C 0 I 11 s nomLeu3.chrUn_GL397889_2 45082 2829 - 50530 AGAACCTTCAAAACACAAATCCTCATCCGCAGGGATCTTCAGGAGGGAGACGGCTGATGCAGCACAACTTTCTTTCACAGGAGCATCATGCAGAATACAGTATGAGATACAGAAAGGCTGCATTGAGTCTTTTGAAGAGCTCGGGGCTTGGTGGGGGTGAGGTAGGAGCTCTCCAGATAGCATCTAATGAGTAGGAACATTCAGGTTGCTTTCTTTT--TCCTTATTAGCAAAACTGTGTGTGCACCATGAATGAAGCTGGTCTCCCTTATCCATATCAAAACTAAATCCAAATTAATTGGCTAACTTGGGACTCAACACCTCCAGGAGCCACGCAGAAGAAAGCTCCACCACACTTTAAAGTAGCTTACCTCATCATATTTGAGGAAAGCAAAACGCTTATGACCAGTATGCTGCTAATACAAGTCTACATATAATGCTGTGTGAAAAATTACTTTTCCCAGTCATAGCTGGCACAGTCCACATTTTGCATTAAAC-TTCCCCCCCTTTTTAAAATTTTAAACACAGGTCTTTTTCTCTTCTTTTTTTAAATTTTAATTGAATTCTACAagactgagtctcagtatgttgcccaggctggtcttgaacccccgggctcaagcgatacatccgtctccgcctcccaaagtgctgggattacaggcctgagacactgtgcccggccTTAAACACAAACCTTAATTCATTCTTACAATTATCCTGAGGTTAGAAAAATGGAAGGGGAAGAAAAATGGCAAGCAGGTAGGCTGACTTCAGCTTCATTATTTGGAAGGACAGTTTGCTTGGTTAAAACACACTACTGCCCGCAAAGGCCAAGATAACAGAAAAATACAAACTTATATAAATAGATTTTATATGTGACAGCAGTTTCAATGGAGACTTTTTCAATGCAAATGACAAACAGCTGTGCTTAGGAATAAATGAAAACGA-ATTTTTTTATCTCAACAGCTGTCCTGAAAGCACCTCTCTACACCTCTACCTGCATTCTGGAATCAAGGAGAAAGCCAAAACGGACGACAAGACACTACATcagccgtgtccaaccctttgactacaaggacttttccgcctatctgtggtggtgggtatcatgaaaattatgcacaaacctttttttttttttttaagc---tcagctatcgttagcattagtgtattttatgtgtggtccaggagcattcttcttccaatgtggccctgagaagccaaaagactggatacctgtgCACTAGGTCAAAAGACTACTCCTTCTGGAACCAATTGTAAAGAATTTCCGACATTATCTTGACATGAAAACCAATGGATAGTGGGACAGAATGCAAAATCTTCAAGAATTTTTGTTGGtttttttttttttttgagtcaaggtcttgctctgtggcccaggtttgagtaccctgatgagatcacagctcagtgcaggctcaagtgctcctcccgcctcagccacagtagtagctgggactacagatgtacacaaccacccctggctaatatgttattttttggagagacgtagagatggagtcttactatattgcccaggttggtctcaaactccttgactcaagggatccaggacaggataacaggtgtgagccaccacacctggccATGTGCATGAACTTTTAAGACAAACACAAGGCCCCATAAAAGTTAAGGTTTTCCCACCTAATTTCCA-GGGGATCTTTTGGTGCAAGGATGAGAAGCCCTTAAAAGTACACAAACAACTCCAAAGATTCAAGACAGTTCATTCGGGCTGGGCCAGCCCACTGGGCAGACTGACCTTCAAGAAAGGCCCACCCATGACATACACCAGATGGCTCTCCAAGAATCTCTCCAGTCCTCAGGGTCCCTAAGGTACTGGACAGAGCTAGGAAAGGAAACCCATTTGCTTCTTCCTGCAGAAAACCCCTTGAGGTCAAGACCCCACAATCAGGTGAGGATGGAGTGGCTCACCCTCAGTCAACAGGCCAGACTCAAGGTGGTATAATGTCTTAACCAAGGGTGTGGGCCTCCAGGTCTGACTCCCAACTCAGTGCTCCTTTAATAACCAATCTTTGTTAATTCTCCTTAACAGGGGTTCCTggcaagtcagttctccctcaggccttccgtttcctcacctgcaagataagaaggctggaccagatgGAAATTCGGGGGGTAAGGGGATGTCCGCGCGCAGCCTACC----CCGCCCACGGGCCCCTAGAGCCTCCATCCAAGTTCCCACCACGCACCCGCCCCACAAATCCTGCCCAAGGTGAGGGCTGGTCCCGGGTCCTCCAGCTGCCACATCAGCGAGTGCAGGAGGGA---GAAGCCTCCAAGGGGGCGACGCGGGCTCAAGGATGCAACTGGGCCAGGAGTGAACTGGAGCCAGGAGAGAGGTGTCTGGGCCGCTCCTGGAACCCAGCCC-GGTCCCCGACCCCCTTACCTCCAAGGTCGGTATCTCCTGCTGGGTGAGGTCCTTGGACACAGCGCACTTGGTGCGCAGCCCGCGCCGGCTGCCCATGGAGATGCCGATGAGCTTCTGGAGCTGCCCACACTGCTGCAGCGCCCTACTGGCCATGGCCCCTGCGCCTCCCTCCGTGGCTGCTCCATCATCCGCGCCACCGCCCTC---CTTCTCTCCCATCGTCGCGGCGCACAGCGCCGCTCTATGCTGCCAGCAGCGGCCGAGGAAGGGAGCCCGGGGCGCGGGCGCCTAGGGGAGGAACCCGGGAGCCTGGAGAGCTGCAGCAGGAGTGCCCCTTGGCGCTGCGGGAGCCAGGACGCCGG--GAGTTGGCAGCCCTGTCTGCTGCTCCCGCCCTCAGAGCC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=7091.000000 s hg38.chr14_KI270725v1_random 136719 227 + 172810 GCAGCACCGGGGGAAAAATCCTCCGCGGCGGGGGTAAAAATCCGCGGCG-----GTGGCAAAAAGCCGCGGGAGTGGGGGCAAAAAAAAACACAAAAAGCCGTGGCGGCGGGGGTAAAAAGCTATGGCGGCAAAAAGTCTCAGCGGCGGGGACCAAAAAACCGCGGAGGCGGG-GGCAAAACGCCGCGGCATCGGGGG-----AAAAAGCCACG----------GCGGTGGGGGCTGATAGCTCCCGC s nomLeu3.chrUn_GL397889_2 47911 207 - 50530 GCG---------------------GCGGCGGGGGCAAACAACCGCGGCGTCGGTGGGGCAAAAAGCCGCGGCGG------------------CCAAAAGCCCCGGCGGAGGGGGCAAAAAGCCTTGGCGG-AAAAAgcggcggcggcgggggct-aaaagccgcggtggcggatggcaaaaagccgcggcggcggcgggggACAAAAAGCCGCGAAAAGCGGCTGCGGCGGGGGCCAAAAGCCGCGGC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e gorGor5.CYUI01000522v1 120212 11 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=4012.000000 s hg38.chr14_KI270725v1_random 136946 26 + 172810 GGCAAAAAGCCGCGGCGGCAAAAAGC s gorGor5.CYUI01000522v1 120223 26 + 126596 GGCAAAAAGCCGCGGCGGCAAAAAGC i gorGor5.CYUI01000522v1 I 11 I 31 s nomLeu3.chrUn_GL397889_2 48118 17 - 50530 GGCA---------GGGGGCAAAAAGC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=170.000000 s hg38.chr14_KI270725v1_random 136972 14 + 172810 TCGG----GCGGTGGGGG s nomLeu3.chrUn_GL397889_2 48135 18 - 50530 CGGGAAAAGCGGAGAGGG i nomLeu3.chrUn_GL397889_2 C 0 C 0 e gorGor5.CYUI01000522v1 120249 31 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=5780.000000 s hg38.chr14_KI270725v1_random 136986 29 + 172810 AAAAAGCCGCGGCGGCGTGGG-CAAAAAGC s gorGor5.CYUI01000522v1 120280 29 + 126596 AAAAAGCCACGGCGGCGGGGG-CAAAAAGC i gorGor5.CYUI01000522v1 I 31 I 62 s nomLeu3.chrUn_GL397889_2 48153 30 - 50530 CAAAAACCGCGGCTGCGGGGGACAAAAAGC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=5680.000000 s hg38.chr14_KI270725v1_random 137015 217 + 172810 CGCAAAAAGTAGTGGCGGCGGGGGCAGAAAATCGCTGCGGTGGGGGCGAAAACCCACGACTGGGGGAAAAAGCCGCGGCGGCGGGGACAAAAACGAGCGGCA----CGGAG-CAAAAAGCCGCGTCCGCAAAACCCGCGGCGGTGGGGGAAAAAGCTGCAAAAA-CAGCGGCGACAGGTGCAAAAAGCCACGGCTGCGGAGGTAAAAATCCGCGGCGGCGAGG s nomLeu3.chrUn_GL397889_2 48183 180 - 50530 CAGGAAAAGTAGCGACGGAGGGGGT-------------------GACAAAAA---------GCAGGGAAAAGCGGAAGCGGCGGGGACAAAAAGCTGCGGCAGCGGCGGGGACAAAAAGCTGCG------------GCAGCAGGGGGGCAAAAAGCCGGGAAAATCGGCGGCGGCGGGGGCAAACAGCCGTGGCGGCAGGGGGAAAAA--CGCTGCGGCGGG- i nomLeu3.chrUn_GL397889_2 C 0 C 0 e gorGor5.CYUI01000522v1 120309 62 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=8461.000000 s hg38.chr14_KI270725v1_random 137232 45 + 172810 GCAAAAAGCCGCGGCGGCGGAGT-CAAAAAGCCTCGGCGGCAAAAA s gorGor5.CYUI01000522v1 120371 45 + 126596 GCAAAAAGCCACGGCGGCGGGGG-CAAAAAGCCGGGGCGGCAAAAA i gorGor5.CYUI01000522v1 I 62 I 19 s nomLeu3.chrUn_GL397889_2 48363 44 - 50530 --AAAAAGCGGCAGCGGCGGGGGATAAAAAGCCGCGGCGGGAAAAA i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=1345.000000 s hg38.chr14_KI270725v1_random 137277 87 + 172810 CCCGCGGTGGCGGGAGCAATAAGCCGCGGGGGCAAAAAGACGCAGCGGCCAAAAGCCGCGCAGCGGGGAGTAAAAAGCCGCGTCGGC s nomLeu3.chrUn_GL397889_2 48407 60 - 50530 GCCTCGGCGACGGGGGCAAAAAGCCAC--------AAAGA-GCAGTG------------GCGGCGGGGA-CAAAAAGCCGCA----- i nomLeu3.chrUn_GL397889_2 C 0 C 0 e gorGor5.CYUI01000522v1 120416 19 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=10838.000000 s hg38.chr14_KI270725v1_random 137364 144 + 172810 AAAAGCCGCGGCAGCGGGGAGTAAAAAGCCGCGTCGGC-AAAAGCCGCGGCGAT-GGGGGTAAAAAGCCGCGTTAGCAAAAA-CCGCGGCGGCGGGGAGCAAAAAGCCGCCGCGGT--GGGCGCAAAAAGTCGCCGCG-----GCCAAAAAGCC s gorGor5.CYUI01000522v1 120435 94 + 126596 AAAAGCCGCGGCGGCGGGGAGCAAAAAG-------------------------------------------------------CCGCGACGTCGGGGAGCAAAAAGCCGCGGCGGCAGGGGTGCAAAAAGCCGCGGCG-----GGCAAAAAGCC i gorGor5.CYUI01000522v1 I 19 I 315 s nomLeu3.chrUn_GL397889_2 48467 151 - 50530 AAAAGACACAGCAGCCGGG-GCAAAAAAACGAGGAGGCAAAAAGCCGCGGCGGCGGGGGGCAAAAAGCCGAGGAGGGAAAAAGCCCCAGCGAC-TGGAGCAAAAACCCGAGGCAGCC-GGGTGTAAAAAGCCGCCGAGGCATAGGCAAAAAGCC i nomLeu3.chrUn_GL397889_2 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=2485.000000 s hg38.chr14_KI270725v1_random 137508 75 + 172810 GTGCCGGTGGCGGC-GGCGGCAAAAAGCCGCGGCGTCGGGGACAAAAAGCCGCGGCGTTGGGGGCGGGGGCAAAAA s nomLeu3.chrUn_GL397889_2 48618 70 - 50530 ACGGCGGTGGGGGCAAAAAGGAAAAAGCGGCAGCGGCGGGGACAAAATGCCG------AGAAGGCCTGGGCAAAaa i nomLeu3.chrUn_GL397889_2 C 0 N 0 e gorGor5.CYUI01000522v1 120529 315 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 137583 42 + 172810 GCCGCGGCGGCGCGGGCCGAAAGCATCGGGGGCAAAAAAACA e gorGor5.CYUI01000522v1 120529 315 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=6793.000000 s hg38.chr14_KI270725v1_random 137625 104 + 172810 CAAAAAGCCGCGGCGGCG-AGGGAAAAAACCCGCGGCGGCGGGG-GCAAAAAGCCGCGGTGGC-AAAAAGCCGCGGCGGCGGGAGCAAAAAGCCGCGGCGGTGGGGG s gorGor5.CYUI01000522v1 120844 107 + 126596 CAAAAAGCCGCGGCGGCGGAGGGCAAAAAGCCGCGACGATGGGGTGCAAAACGCCGCGGCGGCCAAAAAGCCGCGGCGGCGGGGGCATAAACCCGTGGCGGGGGGGG i gorGor5.CYUI01000522v1 I 315 I 94 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 137729 224 + 172810 TAAAAAATCACGTCGGCAAAAGCCTTGGCGGCCGGGGCAAAAAGGCGTGGCGGTGGGCGCAAAAAGTCGTGGCAGTGGGGTTAAAAAGCCGCGTCGGCAAAACCCGCGGCGGCGGGGGAAAAAGCTGCAAGAAGCCGCGGCGATGGGGGCAAAAAGCCGCGATGGCGGGGGCAAACAGCCCCGGCGGCAAAAACCGGCGGCGGCGGGAGCAAAAAGCCACAGCA e gorGor5.CYUI01000522v1 120951 94 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=2554.000000 s hg38.chr14_KI270725v1_random 137953 30 + 172810 GCAAAAAGCCGCAGCGGCGGGGCGCAAAAA s gorGor5.CYUI01000522v1 121045 30 + 126596 GCAAAAAGCCGGGGCGGCGGGGCGCAAAAA i gorGor5.CYUI01000522v1 I 94 I 257 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 137983 11 + 172810 GCCACGTCGGC e gorGor5.CYUI01000522v1 121075 257 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=1402.000000 s hg38.chr14_KI270725v1_random 137994 17 + 172810 AAAAGCCGTGGCGGCGG s gorGor5.CYUI01000522v1 121332 17 + 126596 AAAAGCCACGGCGGCGG i gorGor5.CYUI01000522v1 I 257 I 186 e panTro5.chr1 126709900 54727 + 228573443 I a score=2055.000000 s hg38.chr14_KI270725v1_random 138011 21 + 172810 GGGCAAAAAGCCGCGGCGGCG s gorGor5.CYUI01000522v1 121535 21 + 126596 GGGCAAAAAGCCGCGGCGGCG i gorGor5.CYUI01000522v1 I 186 I 174 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 138032 64 + 172810 GGGAGTAAAAAGCCGCGGTGATGGGGGTAAAAAGCCGCGTTGGCAAAAACCGCGGCGGCGGGGC e gorGor5.CYUI01000522v1 121556 174 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=6644.000000 s hg38.chr14_KI270725v1_random 138096 104 + 172810 GCAAAAAGTCGCCGCGGCGGGGCGCAAAAATCCGCGGCAGCGGGGGGTAAAAAGCCGT-GTCGGCAAAAGCCGTGGC-GGCGGGGACCAAAAGCCGCGGCGGCGGG s gorGor5.CYUI01000522v1 121730 106 + 126596 GCAAAAAGTCGCAGCGGCGGGGGACAAAAAGCGGCGGCGGCGGGGGCTAAAAAGCCGCAGCAGGCAAAAGCCGAGGCGGGTGGGGGCAAAAAGCCGCGGCGGTGGG i gorGor5.CYUI01000522v1 I 174 I 42 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 138200 13 + 172810 GTCAAAAAGCCGC e gorGor5.CYUI01000522v1 121836 42 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=2064.000000 s hg38.chr14_KI270725v1_random 138213 21 + 172810 AAAAGCCGCGGCGGCGGGGGC s gorGor5.CYUI01000522v1 121878 21 + 126596 AAAAGCCGCGGCGGCGGGGGC i gorGor5.CYUI01000522v1 I 42 I 141 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 138234 160 + 172810 AAAATACCGGGGCGGCAAAAAGCCCCGGCGGCGCGGGCAAAAAGCCGCGGTGGTGGGGGCAAAAACCATCTGGAGCGGGGGCAAAAAAAGCCGCGAGGGCGGCGGCGGGGGGAAAAAGTCGCAAAAAACACCGGCGGCTGGGGTAAAAAGCCACGGCGGC e gorGor5.CYUI01000522v1 121899 141 + 126596 I e panTro5.chr1 126709900 54727 + 228573443 I a score=2739.000000 s hg38.chr14_KI270725v1_random 138394 31 + 172810 AAAAAGCCTCGGCGGCGGGGGCAAAAAGCCG s gorGor5.CYUI01000522v1 122040 31 + 126596 AAAAAGCCTCAGCGGCGGGGACAAAAAGCCG i gorGor5.CYUI01000522v1 I 141 N 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=291.000000 s hg38.chr14_KI270725v1_random 138425 3 + 172810 CGT s gorGor5.CYUI01005903v1 947 3 + 21985 CGT i gorGor5.CYUI01005903v1 N 0 I 69 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 138428 26 + 172810 TGTCAAAAGAGTGGCGGCGGGGGCCA e gorGor5.CYUI01005903v1 950 69 + 21985 I e panTro5.chr1 126709900 54727 + 228573443 I a score=4768.000000 s hg38.chr14_KI270725v1_random 138454 65 + 172810 AAAGCCGCGGCGGCGGGGACTGAAACCCATGGCGGCGGGGGCAAAATACTGCGGCGGTAAAAAGC s gorGor5.CYUI01005903v1 1019 65 + 21985 AAAGCCGTGGCGGCGGGGGCAAAAAGCCGTGGCGGCGGGGGCAAAAAGCCGCGGCGGCAAAAAGC i gorGor5.CYUI01005903v1 I 69 I 27 e panTro5.chr1 126709900 54727 + 228573443 I a score=0.000000 s hg38.chr14_KI270725v1_random 138519 3 + 172810 CAT e gorGor5.CYUI01005903v1 1084 27 + 21985 I e panTro5.chr1 126709900 54727 + 228573443 I a score=500.000000 s hg38.chr14_KI270725v1_random 138522 5 + 172810 GGCGG s gorGor5.CYUI01005903v1 1111 5 + 21985 GGCGG i gorGor5.CYUI01005903v1 I 27 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=2844.000000 s hg38.chr14_KI270725v1_random 138527 15 + 172810 GGACAAAAAGCCACA s gorGor5.CYUI01005903v1 1116 15 + 21985 GGGCAAAAAGCCGCA i gorGor5.CYUI01005903v1 C 0 C 0 s canFam3.chr30 26787322 15 - 40214260 GAACAAAAAAACACA i canFam3.chr30 N 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=989.000000 s hg38.chr14_KI270725v1_random 138542 10 + 172810 AAAAGAGCCT s gorGor5.CYUI01005903v1 1131 10 + 21985 AAAAGAGCCT i gorGor5.CYUI01005903v1 C 0 C 0 s calJac3.chr10 107974976 10 - 132174527 AAAAGAACAA i calJac3.chr10 N 0 C 0 s saiBol1.JH378136 10765164 10 + 21366645 AAAAAAACAA i saiBol1.JH378136 N 0 C 0 s canFam3.chr30 26787337 2 - 40214260 ------AC-- i canFam3.chr30 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=301.000000 s hg38.chr14_KI270725v1_random 138552 3 + 172810 TTT- s gorGor5.CYUI01005903v1 1141 3 + 21985 TTT- i gorGor5.CYUI01005903v1 C 0 I 1 s nomLeu3.chr6 53523447 2 + 121039945 -TT- i nomLeu3.chr6 N 0 I 1 s macFas5.chr7 147854677 2 - 171882078 -TT- i macFas5.chr7 N 0 I 1 s calJac3.chr10 107974986 2 - 132174527 -TC- i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10765174 2 + 21366645 -TT- i saiBol1.JH378136 C 0 I 2 s canFam3.chr30 26787339 3 - 40214260 -TTA i canFam3.chr30 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=1185.000000 s hg38.chr14_KI270725v1_random 138555 2 + 172810 TA s panPan2.chr15 55377067 2 - 99763055 TA i panPan2.chr15 N 0 C 0 s gorGor5.CYUI01005903v1 1145 2 + 21985 AA i gorGor5.CYUI01005903v1 I 1 C 0 s nomLeu3.chr6 53523450 2 + 121039945 TA i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 146177094 2 - 169600520 TA i rheMac8.chr7 N 0 C 0 s macFas5.chr7 147854680 2 - 171882078 TA i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 26927778 2 + 40200012 TA i macNem1.NW_012010577v1 N 0 C 0 s cerAty1.NW_012000887v1 4372354 2 - 7633303 TA i cerAty1.NW_012000887v1 N 0 C 0 s chlSab2.chr26 36168733 2 + 58131712 TA i chlSab2.chr26 N 0 C 0 s manLeu1.NW_012108674v1 2563168 2 - 2620224 TA i manLeu1.NW_012108674v1 N 0 C 0 s colAng1.NW_012121598v1 8391855 2 - 10629787 TA i colAng1.NW_012121598v1 N 0 C 0 s calJac3.chr10 107974990 1 - 132174527 T- i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10765178 1 + 21366645 T- i saiBol1.JH378136 I 2 C 0 s canFam3.chr30 26787342 2 - 40214260 TA i canFam3.chr30 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=26715.000000 s hg38.chr14_KI270725v1_random 138557 4 + 172810 GGGA s panPan2.chr15 55377069 4 - 99763055 GGGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1147 4 + 21985 AGGA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523452 4 + 121039945 GGGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177096 4 - 169600520 GGGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854682 4 - 171882078 GGGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26927780 4 + 40200012 GGGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372356 4 - 7633303 GGGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36168735 4 + 58131712 GGGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563170 4 - 2620224 GGGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8391857 4 - 10629787 GGGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107974991 4 - 132174527 GAGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765179 4 + 21366645 GGGA i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 6367310 4 - 11604778 GGGA i aotNan1.NW_018501505v1 N 0 C 0 s canFam3.chr30 26787344 1 - 40214260 --G- i canFam3.chr30 C 0 C 0 e panTro5.chr1 126709900 54727 + 228573443 I a score=146694.000000 s hg38.chr14_KI270725v1_random 138561 20 + 172810 AAAGTGCAATTGCTAACAT-C s panTro5.chr1 126764627 20 + 228573443 AAAGTGGAATTACTAACAT-C i panTro5.chr1 I 54727 C 0 s panPan2.chr15 55377073 20 - 99763055 AAAGTGGAATTACTAATAT-C i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1151 20 + 21985 AAAGTGCAATTACTAACAT-C i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523456 19 + 121039945 AAAGTGGAATTACT-ATAT-C i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177100 20 - 169600520 AATGTGGAATTACTAATGT-C i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854686 20 - 171882078 AATGTGGAATTACTAATGT-C i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26927784 20 + 40200012 AATGTGGAATTACTAATGT-C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372360 20 - 7633303 AATGTGGAATTACTAATGT-C i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36168739 20 + 58131712 AATGTGGAATTACTAATGT-C i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563174 20 - 2620224 AATGTGGAATTACTAATGT-C i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8391861 20 - 10629787 AATGTGGAATTACTAATGT-C i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107974995 20 - 132174527 AAAAGGAAAATATTAATAT-C i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765183 20 + 21366645 AAAGTGAAAATACTAATAT-C i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 6367314 20 - 11604778 AAAGTGAAAATACTAATAT-C i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26787345 20 - 40214260 -AAGTAGAAATACCAGTATAC i canFam3.chr30 C 0 C 0 a score=34900.000000 s hg38.chr14_KI270725v1_random 138581 4 + 172810 TGAA s panTro5.chr1 126764647 4 + 228573443 TAAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55377093 4 - 99763055 TAAC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1171 4 + 21985 TAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523475 4 + 121039945 TAAC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177120 4 - 169600520 TAAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854706 4 - 171882078 TAAC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26927804 4 + 40200012 TAAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372380 4 - 7633303 TAAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36168759 4 + 58131712 TAAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563194 4 - 2620224 TAAC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8391881 4 - 10629787 TAAC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975015 4 - 132174527 TAAC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765203 4 + 21366645 TAAC i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 6367334 4 - 11604778 TAAC i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26787365 4 - 40214260 TTAC i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1055122 4 + 2868945 tgaa i dasNov3.JH579377 N 0 C 0 a score=1760883.000000 s hg38.chr14_KI270725v1_random 138585 189 + 172810 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAGCATCAT-ATTTACAAAA-TAATAACTATTAACATGAGAAGGAATGTAATATTTAATAATTAACATTAT----ATTACAATTCTGAGAATTCTGATCAATGCAATAAAATATCAAGAAGAA--ATAA----TT----CGAAAGAGGTGATAAC--AT--TATTTACAAATAG--------------------- s panTro5.chr1 126764651 195 + 228573443 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAGCATTAT-ATTTACAAAA-TAATAACTATTAACATGAGAAGGAATGTAAGATTTAATAATTAGCATTAT----ATTACAATTCTGGTAATTCTGATCAATGCAATAAAATATCAAGCAGAA--ATAACTAATT----TGCAAGAAGTGATAAC--ATATTATTTACAAATAT--------------------- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55377097 193 - 99763055 TAATATATTAAGGATGCCAATCTAAAAATTGCTAATAGCATCAT-ATTTACAAAA-TAATAACTATTAACATGAGAAGGAATGTAAGATTTAATAATTAGCATTAT----GTTACAATTCTGGGAATTCTGATCAATGCAGTAAAATATCAAGCAGAA--ATAA----CT----AGAGAGAGGTGATAACTTATATTATTTACAAATAT--------------------- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1175 196 + 21985 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAGCATCAT-ATTTACAAAA-TAATAACTATTAACATGAGAAGGAATGTAATATTTAATAATTAGCATTATATACATTACAATTCTGGGAATTCTGATCAATGCAATAAAATATCAAG-AGAA--ATAACTAATT----CGAAAGAGGTGATAAC--AT--TATTTACAAATAT--------------------- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523479 193 + 121039945 TAATATATTAAGGATGCCAATCTAAAAATTGCTAATAGCATCAT-ATTTACAAAA-TAATAACTATTAACATGAGAAGGAATGTAAGATTTAATAATTAGCATTAT----GTTACAATTCTGGGAATTCTGATCAATGCTATAAAATATCAAGCAGAA--ATAA----CT----AGAAAGAGGTCATAACTCATATTATTTACAAATAT--------------------- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177124 191 - 169600520 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAACATCAT-ATTTACAAAATTAATAACTATTAACATGAGTAGGAAAGTAAGAATTAATAATTAGCATTAT----GTTACTATTCTGGGAATTCTGAACAATGTAATAAAATATCAAGCAGAA--ATAA----CT-------AAGAGGTGATAACTCATATTATTTACAAATGT--------------------- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854710 191 - 171882078 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAACATCAT-ATTTACAAAATTAATAACTATTAACATGAGTAGGAAAGTAAGAATTAATAATTAGCATTAT----GTTACTATTCTGGGAATTCTGAACAATGTAATAAAATATCAAGCAGAA--ATAA----CT-------AAGAGGTGATAACTCATATTATTTACAAATGT--------------------- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26927808 191 + 40200012 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAACATCAT-ATTTACAAAATTAATAACTATTAACATGAGTAGGAAAGTAAGAATTAATAATTAGCATTAT----GTTACTATTCTGGGAATTCTGAACAATGTAATAAAATATCAAGCAGAA--ATAA----CT-------AAGAGGTGATAACTCATATTATTTACAAATGT--------------------- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372384 191 - 7633303 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAACATCAT-ATTTACAAAATTAATAACTATTAACATGAGAAGGAAAGTAAGAATTAATAATTAGCATTAT----GTTACTATTCTGGGAATTCTGAACAATGTAATAAAATATCAAGCAGAA--ATAA----CT-------AAGAGGTGATAACTCATATTATTTACAAATGT--------------------- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36168763 191 + 58131712 TAATAAATCAAGGATGCCAATCTAAAATTTGCTAATAGCATCAT-ATTTACAAAATTAATAACTATTACCATGAGAAGGAAAGTAAGAATTAATAATTAGCATTAT----GTTACAATTCTGGGAATTCTGAACAATGTAATAAAATATCAAGCAGAA--ATAA----CT-------AAGACGTGATAACTCATATTATTTACAAATAT--------------------- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563198 188 - 2620224 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAA---CAT-ATTTACAAAATTAATAACTATTAACATGAGAAGGAAAGTAAGAATTAATAATTAGCATTAT----GCTACTATTCTGGGAATTCTGAACAATGTAATAAAATATCAAGCAGAA--ATAA----CT-------AAGAGGTGATAACTCATATTATTTACAAATAT--------------------- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8391885 191 - 10629787 TAATATATTAAGGATGCCAATCTAAAATTTGCTAATAGCATCAT-ATTTACAAAATTAATAACTGTTAACATGAGAAGGAAAGTAAGAATTAATGATTAGCATTAT----GTTACAATTCTGGGAATTCTGAACAACATAATTAAATATCAAGCAGAA--ATAA----CT-------AGGAGGTGATAACTCATATTATTTACAAATAT--------------------- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975019 183 - 132174527 TAATACCTTAAAGATGCCAATCTAAAATTTGCTAATAGCATTAT-ATTTACAAAA----------TTAACATGAGAAGGAAA-TAA----TAATAATTAACATTAT----GCTACAATTCTGGGAATTCTGATCAATGCAATAAAATATCAAGCAGAA--ATAA----CTGATTAGAAAGAGGTGATAATTCATATTATTTATAAATGT--------------------- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765207 183 + 21366645 TAATACATTAAGGACGCCAATCTAAAATTTGCTAATAGCATTAT-ATTTACAAAA----------TTAACATGAGAAGGAAA-TAA----TAATAATTAACATTAT----GTTGCAATTCTGGGAATTCTGATCAATGCAATAAAATATCAAGCAGAA--ATAA----CTGATTAGAAAGAGGTGATAACTCATATTATTTACAAATAT--------------------- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9287710 179 + 13033340 TAATACATCAAGGATGCCAATCTACAATTTGCTAATAGCATTAT-ATTTACAAAA----------TTAACATGAGAAGGAAA-TAA----TAA----TAACATTAT----GTTACAATTCTGGGAATTCTGATCAATGCAATAAAATAGCAAGCAGAA--ATAA----CTGATTAGAAAGAAGTGATAACTCATATTATTTACAAATAT--------------------- i cebCap1.NW_016107324v1 N 0 C 0 s aotNan1.NW_018501505v1 6367338 183 - 11604778 TAATACATTAAGGATGCCAATCTAAAATTTGCTAATAGCATTAT-ATTTACAAAA----------TTAACATGAGAAGGAAA-TAA----TAATAATTAACATTAT----GTTACAATTCTTGGAATTCTGATCAATACAATAAAATATCAAGCAGAA--ATAA----CTGATTAGAAAGAGATGATAACTCATATTATTTACAAATAT--------------------- i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58103357 180 - 182113224 TAATACATTAATGATACCAATTTATATTTTGTAAATTACTTCAT-ACTAATAAAATTTATTACATTTA----GGGGAGAAAAA-------TAATAATTAGCATGTT----GACACATTTCTGGAAATTCTGGTAAATACAGATATGTGTCTCATAGAATCATAA----CT----ATACAGAAGTGAT-----ATTTTTATTATACATGT--------------------- i mm10.chr2 N 0 I 3 s canFam3.chr30 26787370 187 - 40214260 TAATATATTAAGCATGCCAA--TAAAATTTATAAA---CATCAT-ATTTATTGAATTCATTACTATTTA-ATGAGCAAGAATCTAA----GAATAACTCACATTTT----GACACATTCCTGAGGATCCTGATCAATGCAATAAAATTAAAAACAGGA--ATAA----GT-AATTTAAAGAAATGATAGTTTCTGTTGTTTATTAATAT--------------------- i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1055126 171 + 2868945 -aattatttaaagatgcc--------tttttcta----cattatcatgcagaaaa-ttataactgtaaa----------------------aaaaattaa----at----gagccaattctagtaaggttagaaattgtcataaattactg---ataa--atat----gt-----taaacacatggaaagcaat-ttcttaacaaatatcttgagacttcaaacaaaaaa i dasNov3.JH579377 C 0 C 0 a score=624718.000000 s hg38.chr14_KI270725v1_random 138774 52 + 172810 TACAAGAATAAGGAACCTTAAAATGATCATTTTCTATAATTTGTTATAGTAA s panTro5.chr1 126764846 52 + 228573443 TACAAGTATAAGGAACCTTAAAATGATCATTTTATATAATTTATTATGGTAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55377290 52 - 99763055 TACAAGTATAAGGAACCTTAAAATGATCATTTTCTATAATTTATTATAGTAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1371 52 + 21985 TACAAGTATAAGGAACCTTAAAATGATCATTTTCTATAATTTATTATAGTAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523672 52 + 121039945 TACAAGGATAAGGAACCTTAAAATGATCATTTTCTATAATTTATTATAGTAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177315 52 - 169600520 TACAAGTATAAGGAACCTTAAAATGATCATTTGATATAATTTATTATGGTAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854901 52 - 171882078 TACAAGTATAAGGAACCTTAAAATGATCATTTGATATAATTTATTATGGTAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26927999 52 + 40200012 TACAAGTATAAGGAACCTTAAAATGATCATTTGATATAATTTATTATGGTAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372575 52 - 7633303 TACAAGTATAAGGAACCTTAAAATGATCATTTGATATAATTTATTATGGTAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36168954 52 + 58131712 TACAAGTATAAGGAACCTTAAAATGATCGTTTGATATAATTTATTATGGTAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563386 52 - 2620224 TACAAGTATAAGGAACCTTAAAATGATCATTTGATATAATTTATTATGGTAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8392076 52 - 10629787 TACAAATATAAGGAACCTTAAAATGATCATTTGATATAATTTATTATGGTAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975202 52 - 132174527 TACAAGTATAAGGAACCTTAAAATGATCATTTTCTGGaatttattataataa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765390 52 + 21366645 TATAAGTATAAGGAACCTTGAAATGATTATTTTATGGaatttattataataa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9287889 52 + 13033340 TACAAGTATAAGGAACCTTAAAATGATTATTTTCTGGAATTTATTATAATAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6367521 52 - 11604778 TACAAGTATAAGGAACCTTAAAATGATTATTTTCTGGAATTTATTATAATAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36202681 52 - 36342412 TAAAAGCATCAGGAATCTTAAAATGACCATGATTTATAATATATTGTAATAA i otoGar3.GL873530 N 0 C 0 s mm10.chr2 58103540 39 - 182113224 TTAAAAAAGTAGGAAGTGCAAAGTCACAA-------------ATTATGATTG i mm10.chr2 I 3 C 0 s canFam3.chr30 26787557 52 - 40214260 TACAGATATAAGGAAACTTAAAATGATCATGACTTCTGATTAGTTATAAGAA i canFam3.chr30 C 0 I 1467 s dasNov3.JH579377 1055297 46 + 2868945 ------tacaaggaaccttaaaatgatcatgatttctgttttattatgatga i dasNov3.JH579377 C 0 C 0 a score=41573.000000 s hg38.chr14_KI270725v1_random 138826 5 + 172810 ATTG-----T s panTro5.chr1 126764898 5 + 228573443 ATTG-----T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55377342 5 - 99763055 ATTT-----T i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1423 5 + 21985 ATTG-----T i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523724 5 + 121039945 ATTG-----T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177367 5 - 169600520 ATTG-----T i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854953 5 - 171882078 ATTG-----T i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26928051 5 + 40200012 ATTG-----T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372627 5 - 7633303 ATTG-----T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36169006 5 + 58131712 ATTG-----T i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563438 5 - 2620224 ATTG-----T i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8392128 5 - 10629787 ATTG-----T i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975254 5 - 132174527 atta-----t i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765442 5 + 21366645 atta-----t i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9287941 5 + 13033340 ATTA-----T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6367573 5 - 11604778 ATTA-----T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36202733 4 - 36342412 A-TG-----T i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58103579 10 - 182113224 ATTGATATTT i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1055343 5 + 2868945 gctt-----t i dasNov3.JH579377 C 0 C 0 e canFam3.chr30 26787609 1467 - 40214260 I a score=1890236.000000 s hg38.chr14_KI270725v1_random 138831 159 + 172810 TAAAGTCTACCTTAGGAAAGTAACACTAAG-----AGAAAA--TG---T--TAACAAAA---ATA--TCTTTGGAGTTATTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACATTGA--TATAGACTGGCATTAAACTTAGTTTCTT-----GATTTGATT s panTro5.chr1 126764903 159 + 228573443 TAAAGTCTAGCTTAGGAAAATAACACTAAG-----AGAAAA--TG---T--TAACAAAA---ATA--TCTTTGGAGTTTTTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ATGGT-----------ACATTGA--TATAGACTGGCATTAAATTTAGTTTCTT-----GATTTGATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55377347 159 - 99763055 TAAAGTCTACCTTAGGAAAATAACACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTATTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ATGGT-----------ACATTGA--TATAGACTGGCATTAAACTTAGTTTCTT-----GATTTGATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1428 159 + 21985 TAAAGTCTACCTTAGGAAAATAACACTAAG-----AGAAAA--TG---T--TAACAAAA---ATA--TCTTTGGAGTTATTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACATTGA--TATAGACTGGCATTAAACTTAGTTTCTT-----GATTTGATT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523729 159 + 121039945 TAAAGTCTACCTTAGGAAAATAACACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTATTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACAGT-----------ACATTGA--TATAGACTGGCATTAAACTTAGTTTCTT-----GATTTGATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177372 159 - 169600520 TAAAGTCTACCTTAGGAAAATAGCACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTGTTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACAGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147854958 159 - 171882078 TAAAGTCTACCTTAGGAAAATAGCACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTGTTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26928056 159 + 40200012 TAAAGTCTACCTTAGGAAAATAGCACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTGTTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372632 159 - 7633303 TAAAGTCTACCTTAGGAAAATAGCACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTGTTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36169011 159 + 58131712 TAAAGTCTACCTTAGGAAAATAACACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTATTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACAGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563443 159 - 2620224 TAAAGTCTACCTTAGGAAAATAGCACTAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTGTTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8392133 158 - 10629787 TAAAGTCTACCTTAGGAAAATAACACAAAG-----AAAAAA--TG---T--TAACAAAA---ATA--TTTTTGGAGTTATTTAT-TTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ACGGT-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTTTA-----AATTTGATT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975259 161 - 132174527 taaaGTCTACCTTAGGAAAA-AATACTAAG-----aaaaaa--tattat--taacaaaa---ata--tttttGGAGTTATTTATGTTAAC-AAAATTTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ATGGT-----------ACATTGA--TATAAACTGGCATTAAACTTAGTTTCTT-----AATTTGATT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765447 157 + 21366645 taaaGTCTACCTTAGGAAAAGAATACTAAG-----AAAAAA--TGTTAT--TAACAAAA---ATA--TTTTTGGAGTTATTTATGTCAAC-AAAATTTGGAAAAGC-----TATTTAGCTAGAAGGAA---------------ATGGT-----------ACATTGA--TATAGACTGGCATTAAACTTAGTTTCTT-----AATTTGATT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9287946 159 + 13033340 TAAAGTCTACCTTAGGAAAATAACACTAAG--------AAA--TGTTAT--TAACAAAA---ATA--TTTTTGGATTTATTTATGTTAAC-AAAATGTGGAAAAGCCTAAATATTTAGCTAGAAGGAA---------------ATGGA-----------ACCTTGA--TATAGACTGGCATTAAACTTAGTTTCTT-----AATTAGATT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6367578 162 - 11604778 TAAAGTCTACCTTAGGAAAATAACACTAAG-----AAAAAA--CGTTAT--TAGCAAAA---ATA--CTTTTGGAGTTATTTATGTTAAC-AAAATTTTGAAAAGCCTAGATATTTAGCTAGAAGGAA---------------ATGGT-----------ACATTGA--TATAGACTGGCATTGAACTTAGTTTCTT-----AATTTGATT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36202737 163 - 36342412 TGCAGTTCACTTTAAGAAAATAACACTAGG-----AAAAAT--TGTT-T--TAATAAAAATGATA--TTTTTAGAGTTATTTATGTTAAC--AGATTTGGATAAACCTAAATATTTAGGTGGAGTTAA-CAGTTGGTGATTATATAGT-----------ACATCGA--TACACAATGGCCTTCAGTTTAGT------------------- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58103589 168 - 182113224 TAAAATGCATCTT---AAAATAATACCTAGGCCATGAAAAT--TA---T--CAGCAGAA---ATG-CTTTTTGGAATTATTTATATTAACAAAAATTTGGAAATTCCTAAATGACTAGCTACCTGGTA---------------ACAGTGTGTGATTAGAGCATTGATCTATAGACTGATGTTGA-CTGAGGCTCCT-----GA------- i mm10.chr2 C 0 C 0 s canFam3.chr30 26789076 179 - 40214260 tgAAATCTACCT---GAAGATAATGCTaag-----aaaaaagtta---t--gaacaaaa---atgtttttttgaagttatttatgttaacaaaaattttgaaagacttaagtatttaactctagggaaataatttgtgaat--atggt-----------acattta--tttggaatGGCATTAAATTTAAtttgtttaaaagattttatt i canFam3.chr30 I 1467 I 161 s dasNov3.JH579377 1055348 147 + 2868945 tgaaatctaccttaagaaaataattataag-----gaaaga--ag---ttataataaaa---atg--tttatg------------------ataatttagaaaaacctaaatatatagctattgggaattagtttgtgatt--ttggt-----------acattta--cacaGACTGACATTAACGTTGGTATTT--------------- i dasNov3.JH579377 C 0 C 0 a score=8036845.000000 s hg38.chr14_KI270725v1_random 138990 614 + 172810 AAACTTAGTTTCTATGAGACATTTGTATCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTCATAATATTGAATATGTGATGTAATGGCAACCATGAAGAAAATATCAGAGAACCAAATGGAAGGAAAAGAACAGAACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTTTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTCAGAATTTGAGAATACGTTATATTTATAATTAGAAAACAT-AAAATGAGTGCTAAATAAACAAATATACCAAATTCTGTTTAGAATTCACTTCCC-------------CAAGAAACTTTCTTTGATTAATCCCACTGGCATTGATCATTATTTTATATGGCAC-CCCCATACTTATGTATTCAGTTTCTACCAAATTAATTTTCATGTTTTAAAAAATCAATTTATAAGCATAATTATGGCATTTCTACATTTATATAGTGTAGTCTCCAAACTGAATTATAAGCTTGAGGATATGAGGAACCAC-AG-TGTATTTCCAATTATATTTATACAATAAATCATGTGGTACTTTTCACAGAGTGAATGTTGTTAACTTACTGAAGACCTGACGAAACA s panTro5.chr1 126765062 613 + 228573443 AAACTTAGTTTCTATGAGACATTTGTATCATTCAAAGT-TGTATGGCTAGACACTGACTGAAACACAAAGTGGGTTATAATATTGAATATGTGATATAATGGCAATGATGAAGAAAATATCAGAGAACAAAATAGAAGGAAAAGAGCAGAACCTGA-ATAAAGATTACCTTTGGACAGTGGCATCTTAGTTCCTTTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGGATACATTATATTTATGATTTAAAAATAT-AAAATGAGTGCTAAATAAACAAATATACCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaatcc-actggcattgatcattatttcatatggcac-ccccatacttatgtattcagtttctaccatattaatttgcatgttttaaaaagtcaatttataagcaaaattatggcatttctacatttatatagtgtagtctccaaactgaattataagcttgaggatatgaggaaccaC-AG-TGTATTTCCAACTATATTTATGCAATAAGTCATGTGGTACTTTTCACAGAGTGAATGTTGTTAACTTACTGAACACCTGATGAAACA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55377506 615 - 99763055 AAACTTAGTTTCTATGAGACATTTGTATCATTCAAAGTCTGTATGTATAGACACTGACTGAAACACAAAGTGGGTTATAATACTGAATATGTGATATAATGGCACCCATGAAGAAAATATCAGAGAATCAAATGGAAGGAAAAGAGCAGAACCTGA-ATAATGATTACCTGTGGACAGTGGGATCTTAGTTCCTTTTAATCTTCCTACT-AATTTAAGATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAACAT-AAAATGAATGCTAAATAAACAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caagaaacttgccttgattaatcccactggcattgatcattactttatgtggcac-ccccatacttacgtattcagtttctaccatattaatttgcatgttttaaaaagtcaatttataagcataattatggcatttctacatttattgagtgtagtctccaaactgaattataagcttcaggatatgaggaaccaC-AG-TGTATTTCCAACTATATTTATACAATAAATCATGTGGTAATTTTCACAGAGTGAATGTTGTTAACATACTGAACACCTGATGGAACA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 1587 613 + 21985 AAACTTAGTTTCTATGAGACATTTGTATCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTCATAATACTGAATATGTGATGTAATGGCAACCATGAAGAAAATATCAGA-CACCAAAtggaaggaaaagagcagaacctga-ataatgattacctttggacagtgggatcttagttccttttactcttcctacg-aatttaaaatttgcaaatttattaccttgagaatatgagaatacattatatttataattagaaaaCAT-AAAATGAGTGCTAAATAAACAAATATACCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaatcccactggcattgatcattattttatatggcac-ccccatacttatgtattcagtttctaccaaattaatttgcatgttttaaaaagtcaatttataagcataattatggcatttctacatttatatagtgtagtctccaaactgaattataagcttgaggatatgaggaaccaC-AG-TGTATTTCCAACTATATTTATACAATAAATCATGTGGTACTTTTCACAGAGTGAATGTTGTTAACTTACTGAAGACCTGACGAAACA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53523888 613 + 121039945 AAACTTAGTTTCTGTGAGACATTTGTATCATTCAAAGTCTGTATGTATAGACACTAACTGAAACACAAAGTGGATTATAATATTGAATATGTGATATAATGGTAACCATGAAGAAAATATCAGAGAACCAAATGGAAGGAAAAGAGCAGAACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTTTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAATAT-AAAATGAGTGCTAAATAAACAAATATATCAAATTCTGCTTAGAATTCACTTCCC-------------CAAGAAACTTGCCTTGATTAATCCCACTGGCATTGATCATTACTTTATATGGCAC-CCCCATACTTATGTATTCAGTTTCTACCATATTAATTTGCATGTTTTAAAAAGTCAATTTATAAGCATAATTATGGCATTTCTACATTTATATAGTGTAGTCTCCAAACTGAATTATAAGCTTCAGGATATGAGGAACCAA-AG-TGTATTTCCAGCTATATTTATACAATAAA--ATGTGGTAATTTTCACAGAGTGAATGTTGTTAACTTACTGAACACTTGATGAAACA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146177531 612 - 169600520 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAACGCCAACCGTGAAGAAAATATCAGAGAACCAGATGGAAGGAAAAGAGCAGGACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAACAT-AAAATGAGTGCTAAAGAAACAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaaacctgctggcattgatcattactttatatggcac-ccccatacttatgtattcagtttctaccatagtaatttgcatgttttaaaaagtcaatttataagcataattatggcatttctacatttatataatgtagtctccaaactgaattataagcttgcggatatgaggaaccaC-AG-TGTATTTCCAACTCTATTTATACAATAAATCATGTGGTACTTTT--CAGAGTGAATGTTGTTAACTTACTGAACACCTGATGAAACA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147855117 612 - 171882078 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAACGCCAACCGTGAAGAAAATATCAGAGAACCAGATGGAAGGAAAAGAGCAGGACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAACAT-AAAATGAGTGCTAAAGAAACAAATATATCAAATTCTGTTTAGAATTCACTTCCC-------------CAAGAAACTTTCCTTGATTAAACCTACTGGCATTGATCATTACTTTATATGGCAC-CCCCATACTTATGTATTCAGTTTCTACCATATTAATTTGCATGTTTTAAAAAGTCAATTTATAAGCATAATTATGGCATTTCTACATTTATATAATGTAGTCTCCAAACTGAATTATAAGCTTGCGGATATGAGGAACCAC-AG-TGTATTTCCAACTCTATTTATACAATAAATCATGTGGTACTTTT--CAGAGTGAATGTTGTTAACTTACTGAACACCTGATGAAACA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26928215 612 + 40200012 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAACGCCAACCGTGAAGAAAATATCAGAGAACCAGATGGAAGGAAAAGAGCAGGACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAACAT-AAAATGAGTGCTAAAGAAACAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaaacctactggcattgatcattactttatatggcac-ccccatacttatgtattcagtttctaccatattaatttgcatgttttaaaaagtcaatttataagcataattatggcatttctacatttatataatgtagtctccaaactgaattataagcttgcggatatgaggaaccaC-AG-TGTATTTCCAACTCTATTTATACAATAAATCATGTGGTACTTTT--CAGAGTGAATGTTGTTAACTTACTGAACACCTGATGAAACA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4372791 612 - 7633303 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAACGCCAACTGTGAAGAAAATATCAGAGAACCAGATGGAAGGAAAAGAGCAGGACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAACAT-AAAATGAGTGCTAAAGAAATAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaatcctactggcattgatcattactttatatggcac-ccccatacttatgtattcagtttctaccatattaatttgcatgttttaaaaagtcaatttataagcataattatggcatttctacatttatataatgtagtctccaaactgaattataagcttgaggatatgaggaaccaC-AG-TGTATTTCCAACTCTATTTATACAATAAATCAGGTGGTACTTTT--CAGAGTGAATGTTGTTAACTTACTGAACACCTGATGAAACA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36169170 611 + 58131712 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAACCCCAACCGTGAAGAAAATATCAGAGAACCAAATGGAAGGAAAAGAGCAGGACCTGA-ATAATGATTACCTTTGGACAGTGGAATGTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATGTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAG-AAACAT-AAAATGAGTGCTAAATAAACAAATATATCAAATTCTGTTTAGAATTCACTTCCC-------------CAAGAAACTTTCCTTGATTAATCCTACTGGCATTGATCATTACTTTATACGGCAC-CCCCATACTTATGTATTCAGTTTCTACCATATTAATTTGCATGTTTTAAAAAGTCAATTTATAAGCCTAATTATGTCATTGCTACATTTATATAGTGTAGTCTCCAAACTGAATTATAAGCTTGAGGATATGAGGAACCAC-AG-TGTATTTCCAACTCTATTTATACAATAAATCATGTGGTACTTTT--CAGAGTGAATGTTGTTAACTTAGTGAACACCTGATGAAACA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2563602 612 - 2620224 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-TGTATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAACGCCAACCGTGAAGAAAATATCAGAGAACCAGATGGAAGGAAAAGAGCAGGACCTGA-ATAATGATTACCTTTGGACAGTGGGATCTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACATTATATTTATAATTAGAAAACAT-AAAATGAGTGCTAAAGAAACAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaaacctactggcattgatcattactttatatggcac-ccccatacttatgtattcagtttctaccatattaatttgcatgttttaaaaagtcaatttataagcataattatggcatttctacatttatatagtgtagtctccaaactgaattataagcttgaggatatgaggaaccaC-AG-TGTATTTCCAACTCTATTTATACAATAAATCATGTGGTACTTTT--CAGAGTGAATGTTGTTAACTTACTGAACACCTGATGAAACA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8392291 608 - 10629787 AAACTTAGTTTCTATGAGACATTTGTGTCATTCAAAGT-CATATGTATAGACACTGACTGAAACACAAAGTGGGTTACAATATTGAATATGTGATATAATGACAACCGTGAAGAAAATATCAGAGAACCAAATGGAAGGAAAAGAGCAGGACCTGA-ATAATGAGTACCTTTGGACAGTGGGATCTTAGTTCCTCTTACTCTTCCTACT-AATTTAAAATTTGCAAATTTATTACCTTGAGAATATGAGAATACA------TTATAATTAGAAAACAT-AAAATGAGTGCTAAATAAACAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caagaaactttccttgattaatcctactggcattgatcattactttatatggcac-ccccatacttatgcactcagtttctaccatattaatttgcttgttttaaaaagtcaatttataagcataattatggcatttctacatttatatagtgtagtctccaaactgaatcataagcttgaggatatgaggaaccaC-AG-TGTATTTCCAACTATATTTATACAATAAATCATGTGATACTTTTCACAGAGTGAAAATTGTTAACTTACTGAACACCTGATGAAACA i colAng1.NW_012121598v1 C 0 I 1 s calJac3.chr10 107975420 614 - 132174527 AAACTTTCTTTCTATGAGACATTTGTATCACTCAAAGCCTGTATGTATAGACACTTACTGAAACACAATGTGGGTTGTAATA-TGAACATGTGATATAATGGTAACCATGAAGAAAATATCAGAGAACCAAATGGAAGGAAAACAGCAAACCCTGA-ATAATGATTACCTTTGGACTGTGGGATCTTAGTTCCTTTTACTCTTCCTACT-AATTTGAAATTTGCAAATTTATTACCTTGAGAATTTGAGACTACATTATATATATAATTAGAAAACAT-AAAATGAGTGCTAAATAAACAAATATATCAAATTCTGTTTAGAATTCACCTCCC-------------CAGGAAACTTTCCTTGACTAAGCCCACTCGCATTGATCATTACTTTATATGGCAC-CCCCATACTTATGTATTCAGTTTTCACCATATTAATTTGCATATTTTAAAAAGTCAATTTATGAGTATAATCATGGCATTTCTACATTTATATAGCGTAGTCTTCAAACTGAATTATAAGCTTGAGAATATGAGCAACCAC-AG-TGTATTTCCAACTATATTTGTGCAATAAATCATGTGGTACTTTTCACAGAGTGAATGTTGGTAACAAATTGAGCACCTGATGAAACA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10765604 604 + 21366645 AAATTTTATTTCTATGAGACATTTGTATCGCTCCAAGTCTGTATGTATAGACACTGACTGAAACACAATGTGAGTTGTAATATTGAATATGTGATATAATGGTAACCACGAAGAAAATATCAGAGAATGAAATGGAAGGAAAACAGCAAACCCTGA-ATAATGATTACCTTTGGACTGCGGGATCTTAGTTCCTTTTACTCTCCTTACT-AATTTGAAATTTGCAAATTTATTACCTTGAGAATTTGAGACTACATTATATATATAATTAGAAAACAT-AAAATGAGTGCTAAATAAACAAATATATCAAATTCTGTTTAGAATTCACTTCCC-------------CAGGAAACTTTCCTTGATTAATCCCACTCGCAGTG-----------ATATGGCAC-CCCCATACTTATGTATTCAGTTTTCACCATATTAATTTGCATGTTTTAAAAAGTCAGTTTATGAGTATGATCATGGCATTTCTACATTTATGTAATGTAGTCTCCAAACTGAATTATAAGCTTGAGAATATGAGCAACCAC-AG-TGTATTTCCAACTATATTTGTACAATAAATCATGTGGTACTTTTCACAGAGTGAATGTTGTTAACAAACTGAACACCTGATGAAACA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9288105 615 + 13033340 AAACTATGCTTCTATGAGACTTTTGTATTGCTCCAAGTCTGTATGCATAGACACTGACTGAAACACAATGTGGGTCATAATACTGAATATGTGATATAATGATAACCATGAAGAAAATACCAGAGAACCAAATGGAAGGAAAGCAGCAAACCCTGA-ATAATGATTACCTTTGGACTGTGGGATCTTAGTTCCTTTTACTCTTCCTACT-AATTTGAAATTTGCAAATTTATTACCTTGAGAATTTGAGACTACATTATATATATAATTAGAAAACAT-AAAATGCGTGCTAAATAAACAAATATATCAAATTCTgtttagaattcacttccc-------------caggaaactttccttgattaatcctactcgcagtgatcattactttatatggcac-ccccatacttatgtattcagttttcaccatattaatttgCATGTTTTAAAAAGTCAATTTATGAGTATAATCATAGCATTTCTACATTTATATACTGTAGTTTCCAAACTGAATTATAAGCTTGAGAATATGAGCAACCAC-AG-TGTATTTCCAACTATATTTGTACAATAAATCATGTGGTACTTTTCACAGAGTGAATGTTGTTAACAAACTGAACACCTGATGAAACA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6367740 615 - 11604778 AAACTTTGTTTCTATGAGACATTTGTATCGCTCAAAGTCTGCATGTATAGACACTGACTGAAACAGAATGTGGGTTGTAATATTGAATATGTGATATAATGGTAACCATGAAGAAAATATCAGAGAACCAAATGGAAGGAAAACAGCAAAGCCTGA-ATAATGATTACCTTTGGACTGTGGGATCTTAGTTCCTTTTACTCTTCCTACT-AGTTTGAAATTTGCAAATTTATTACCTTGAGAATTTGAGACTACATTATATATATAATTAGAAAACAT-AAAATGAGTGCTAAATAAACAAATATATCAAATTCTGTTTAGAATTcacttccc-------------caggacactttccttgattaatcccactcgcattgatcattactttatatggcac-ccccatacttatgtattcagttttcaccatattaatttgcatgttttaaaaagtcaatttatgagtataatcatggcatttctacatttatatagtgtagtctccaaactgaattataagcttgagaataTGAGCAACCAC-AG-TGTATTTCCAACTATATTTGTACAATAAATCATGTGGTACTTTTCACAGAGTGAATGTTGTTAACAAACTGAACACCTGATGAAACA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36202900 579 - 36342412 ---------TTCTGTGAGGCACTTGAATCAATCAAAGTCTTTATGTATGG---TTAATCAAAACACAAAGTGG-----------------GTAATATTATGGCAACTATCCAGAAAatatcagagaac-aaatggaaggaaaagaacagagcctaa-agagtgattatcttcggacagtgggtttttaatttcttttattcttcttactaaacttggaattgataaatttattactgggagaatataagaatatattatatttataattagaaaaCAT-GAAATGAGTGCTAAAT----AAATATATCAAATTCTGTTTAGAATTCACTTCCC------------ACAAGAAACCTTCCTTGATTAATCCCATTGGCATTGATCATTATTTTATACCACAC-ACCCATACTTATGTATTCAGTTTGTGCCATATTAATTTGCATGCTTAAAAAAG-CAATTTGTGAGCGTAATTACAGTATTTCCACATTTATGGGATGTAGTTTCCAAACTGGGTCATAAGTTTGAGTACAGAAGGAACTAC-AA--GTGTTTCCTACTATATTTGCACAGTAACTC--GTGGTACTTTTCAGAGAGTGGATGTTGTTAACCTCCTGAATACCTGATGAAACA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58103757 502 - 182113224 ------------------AGGTTTGCTCCACTCAATGTCTGCCTGC-CAGTTACTCAC------------TAGGTT--------------------------------------------------------------------------------------------CTTTGGTCAGTGAGGTTGTAGTTCATTTTTCTTTTATTACT-AATTTGGAATTTGCACATTTATTGACATAAGATTATAAGAATACATTATATTTATAATTAGTAGGCAT-AAAGTTAGTGCTACATAAACAAATATATCAAATTCTGTTTAAAATTCAGTCCCCCCACCACCACCACCAGAAACTTTTCCCTGATTAATCCCAGGGGCATTGATCATCACT--GTACAGCACGCCCCACACTTATGCATGCAGTTTGCACCGTGCTCATTTGCATGTTTAAAAAAA-CAATTTATGAACATAATTACAGTGTTTCTACAGTCATATAGGATGGTCTCCAAACTGAATTATAAGCAGAAGGTTACAAGAAAACAC-AAATACATTTCCAA-TGCATTTCTAGAATAATTCATGTGGCACTTCTCACGCAGTGGC--TTGTTACCTCACGATGAATCTGACAACACC i mm10.chr2 C 0 C 0 s canFam3.chr30 26789416 596 - 40214260 AAACTTAATTTTTATGAGATATTTGTATCACTCAGAGTCTGTGTGCATAGACATTG-CCAAAACACAAAGAGAATTGT-ATATTGAATATATGACATTAAAGTAGTTGTATAGAGAATACCAGAGGAGAAAATGAAATGAAAACAACAGAGGTTGGTATAGTGATTGTCTTTGG-CAGTGGATTCTTAGCTTCTTTTGTTCTTCTTACT-AATTTGAAATT-ACAAATTTATT--------AATGTGAGATTACATTATTTTTATGATTAG--GATAT-GAAACAAGTACTAAGT-AACAAATATGCCAAATGcagtttagaattcaattccc------------tcaggaaaccttctctgattaatctcactggtgccgatcatttctttgtaccatgc-ccccatacttgtgtattctgttggtaccatattaatttgcatgtttcaaaaaatcaatttatgagcataattat-gtatttccacatgtatatGGTGTAGTCCCCACATTGAAGTATAAACTTGAGAATATGAGGAACCTCAAG-TGTATGTCTTGCTGTATTTCTGGAATAATTCATGT---ACTTTTCACAGATTGAA---TGTTAACTTACTGAACACCTGATGAACCA i canFam3.chr30 I 161 C 0 s dasNov3.JH579377 1055495 590 + 2868945 -------------ATGTAGCATTTGTATCACTCAAAGTCTGTGTGTATAGATGTTGTCTGAAATACATTGTAGGTTATAAAACTGAATATGTAATTTCATGGTAACTATGTAGAAAATGTCAGAAAACAAAATGGAAGGAGAACAGCAGAACCCGA-ATAGTGAATATCTTTGGACAATGTTATTGTAGATCCTTTTA---TTCTTACT-AATTTGAAATTTGCAAATTTATTATC--------ATAAGAATACATTAATTTTATAATTAGAAAACATAAAAAGGACTGCTAAATGAACAAATATATCAAATTCTGTTTAGAATTCACTTCCC-------------CTGAGAAACTTCCTTGATTAATCCCATTGGCATTGATCATTACTTCATACTGCAT-CCCCATATTTATATATTCAGTTTGCACCATATTAATTTGCATGCTTTAAAAAATTAATTTATGAGCCTAATTATGGTATTTTCCCTTTTATATTGTGTAGTCTCCAAACTGAGTTATAAGCTTGAAGATATCAGCAACTGCAAG-TGTATTTCTTCCAATATTTCTACAATAACTCACCCAGTGCATTACACAGAGTGAATATTG---ACTTAATGAACATTTGATGAAACA i dasNov3.JH579377 C 0 C 0 a score=7954.000000 s hg38.chr14_KI270725v1_random 139604 1 + 172810 G s panTro5.chr1 126765675 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378121 1 - 99763055 T i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2200 1 + 21985 T i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53524501 1 + 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178143 1 - 169600520 T i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147855729 1 - 171882078 T i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26928827 1 + 40200012 T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4373403 1 - 7633303 T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36169781 1 + 58131712 T i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564214 1 - 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107976034 1 - 132174527 T i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766208 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9288720 1 + 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6368355 1 - 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36203479 1 - 36342412 C i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58104259 1 - 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr30 26790012 1 - 40214260 T i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1056085 1 + 2868945 C i dasNov3.JH579377 C 0 C 0 e colAng1.NW_012121598v1 8392899 1 - 10629787 I a score=3547884.000000 s hg38.chr14_KI270725v1_random 139605 304 + 172810 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACGTGAAATAAAATCCAACATTCTGTGTAATTCTTATTGTCTCTTAACCCTACTTGTTGAATTACGAAAACTTCA--TATACAAAAAT-TT--GAGCATTAT---ACTC-TTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCTCACTATTACAATAGTCTTCCCACTGTAAAAACTTTTAAGCTGTAA-CTTTCTGCCATTACTACGTTACCTTCGTA----TTAGTTTATGCCATACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAGGT s panTro5.chr1 126765676 304 + 228573443 GGGAAAGATGGCCATATCTGACAAGAGGAACAGATGTGAAATAAAATCCAACATTCTGTATAATTCTTATTGTCTCTTAACCCTACTTGTTGAATTACAAAAACTACG--TATACAAAAAT-TT--GAGCATTAT---ACTC-TTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACGTGGCTCTCACTATTACAATAATCTTCCCCCTGTAAAAACTTTTAAGCTGTAA-CTTTCTGCCATTACTATATTACCTTCATA----TTAGTTTATGCAGTACTTCTTTCTGAGTTTCTGCCAATATTCATCTGAAGT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378122 309 - 99763055 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTCTGTATAATTCTTATTGTCTCTTAACCCTACTTGTTGAATTATGAAAACTACA--TATACAAAAAT-TT--GAGCATTAT---ACTCTTTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATCACAATAATCTTCCCATTGTAAAAACTTTTAAGCTCTAA-CTTTCTGCCATTACTACATTACCTTTATATTAGTTAGTTTATGCCATATTTCTTTCTGAGTTTCTGTCAATATTCATCTGAATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2201 304 + 21985 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACGTGAAATAAAATCCAACATTCTGTGTAATTCTTATTGTCTCTTAACCCTACTTGTTGAATTACGAAAACTACA--TATACAAAAAT-TT--GAGCATTAT---ACTC-TTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCTCACTATTACAATAATCTTCCCACTGTAAAAACTTTTAAGCTGTAA-CTTTCTGCCATTACTACATTACCTTCATA----TTAGTTTATGCCATGCTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53524502 305 + 121039945 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTCTGTATAATTCTTATTGTCTCTTAACCCTACTTGTTGAATTACAAAAACTACA--TATACAAAAAT-TT--GAGCATTAT---ACTCTTTTAGCTGTACATTATCATTTCAAAAC-AAACTTACACATGGCTCCCATTATTACAATAATCTTCCCATTGTAAAAACTTTTAAGCTCTAA-CTTTCTGCCATTACTGCATTACGTTTATA----TTAGTTTATGCCATATTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178144 305 - 169600520 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTGTGTATAATTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGCATTAT---ACTCGTTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATTACAATAATGCTCCCATTGTAAAAACTTTTAAGATCTAA-CTTTCTGCCACTACTACTTTACCTTTGTA----TTAGTTTATGCCCTACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147855730 305 - 171882078 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTGTGTATAATTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGCATTAT---ACTCGTTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATTACAATAATGCTCCCATTGTAAAAACTTTTAAGATCTAA-CTTTCTGCCACTACTACTTTACCTTTGTA----TTAGTTTATGCCATACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26928828 305 + 40200012 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTGTGTATAATTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGCATTAT---ACTCGTTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATTACAATAATGCTCCCATTGTAAAAACTTTTAAGATCTAA-CTTTCTGCCACTACTACTTTACCTTTGTA----TTAGTTTATGCCGTACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4373404 305 - 7633303 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTGTGTATAATTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGCATTAT---ACTCGTTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATTACAATAATGCTCCCATTGTAAAAACTTTTAAGATCTAA-CTTTCTGCTACTACTACTTTACCTTTATA----TTAGTTTATACCATACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36169782 305 + 58131712 GGGAAAGATAGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAGCATTCTGTATAATTCTTACTGCCTCTTAACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGTATTAT---ACTCATTTATCTGTACATTATCATTTTAAAAC-AAACTTATACATGGCTCTCATTATTATAATAATGCTCCCATTGTAAAAACTTTTAAGCTCTAA-CTTTCTACCACTACTACTTTACCTTTATA----TTAGTTTATGCCATACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564215 305 - 2620224 GGGAAAGATGGCAATGTCTGACAAGAGGAACAGACATGAAATAAAATCCAACATTGTGTATAACTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGCATTAT---ACTCGTTTAGCTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATTACAATAATGCTCCCATTGTAAAAACTTTTAAGATCTAA-CTTTCTGCCACTACTACTTTACCTTTATA----TTAGTTTATGCCATACTTCTTTCTGAGTTTCTGTCAATATTCATCTGAAGT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8392900 305 - 10629787 GGGAACGATGGCAATGTCTGACAAGAGGAACAGACGTGGAATAAAATCCAACATTCTGTATAATTCTTATTGCCTCTTGACCCTACTTGTTGAATTACAAAAACTATA--CATACAAAAAT-TT--GAGCATTAT---ACTCTTTTAGGTGTACATTATCATTTCAAAAC-AAACTTATACATGGCTCCCATTATTACAATAGTGCTCCCATTGTAAAAACTTTTAAGCTCTAA-CTTTCTGCCACTACTACTTTATCTTTATA----TTAGTTTATGCCATACTTCTTTCTGAGTTTCTATCAATATTCATCTGAAGT i colAng1.NW_012121598v1 I 1 C 0 s calJac3.chr10 107976035 298 - 132174527 TAGAAATATGGGAATCTCTGATAAGAAGAACAGACATGAAATGAAATCCAACATTCTGTAGAATTCTTGTTGCCTCTTAACCCTACTTGTTGAATTACAAAGA-TACA--TATACAGAAAG-TT--GAGCATTAT---ACTCTTTTAGCTGAACGTTATCATTTCAAAAC-AAACTTATACATGGCTT------GTCCAGTAGCGCTCCCATTGTAAAAACTTTTAAGCTCTCA-CTTTCTGCCATTACTACATTCCCTTTATA----TTAATTTATGACATACTTCTTTCTGAGGTTCTGTCAATATTCATCTGAAGT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766209 297 + 21366645 TGGAAACATTGGAATGTCTGACAAGAGGAACAGACATGAAATGAAATCCAACATTCTGTATAATTCTTACTGCCTCTTAACCCTATTTGTTGAATTACAAAGA-TACA--TATACAAAAAG-TT--GAGCATTAT---ACTC--TTAGCTGTACGTTATCATTTCAAAACAAAACTTATACATGGCTT------ATCCAATAGTGCTCCCATTGTAAAAACTTTTAAGCTCTAA-CTTTCTGCCACTACTACATTACCTTTATA----TTAGTTTATGGCATACCTCTTTCTGAGGTTCTGTCAATATTCATCTGAAGT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9288721 298 + 13033340 TAGAAACATGGGAATGTCTGACAAGAGGAACAGACATGAAATGAAATCGAACATTTTGTATAATTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAGA-TACA--TATACAAAAAG-TT--GAGCATTAT---ACTCTTTTAGCTGTACGTTATCATTTTGAAAC-AAACTTATACATGGCTT------GTCCAATAGTGCTCCCATTGTAAAAACTTTTAAGCTCTAA-CTTTCTGCCACTACTACATTACCTTTATA----TTAGTTTATGACATACTTCTTTTTGAGGTTCTGTCAATATTCGTCTGAAGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6368356 298 - 11604778 TAGAAACATGGGAATGTCTGACAAGAGGAACAGACATGAAATGAAATCCAACATTCTGTATAATTCTTATTGCCTCTTAACCCTACTTGTTGAATTACAAAGA-TACA--TATACAAAAAG-TT--GAGCATTAT---ACTCTTTTAGCTGTACATTATCATTTGAAAAC-AAACTTATATATGGCTT------GTCCAATAGTGCTCCTATTGTAAAAACTTTTAAGCGCTAA-CTTTCTGCCACTACTACATTACCTTTATA----TTAGTTTATGACATACTTCTTTCTGAGGTTCTGTCAATATTCATCTGAAGT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36203480 297 - 36342412 TGGAAACATGA-AACATCTAACACGAGGTATAGACAGGAAGCACAATTCACCATTCTCTACAATTTTTGTTGCCACTTAACTGTAGTTGTTTAATTAAAACACATACA--TATACAGAAAG-TTAAGAATATGAT---ACCTCTTTAGCTATAAATGATCAGTTCATATC-AAATTTATAAATGGCTT------ATCCAACAATTCTCTCATTGTAAAAAATTTTCAGCTATAATCTTTATGCTGTTAGTACCCTACCTTTATA----TTCACATATGCCATACTTC----TAAGTTTCTATCAGAATTTACCTAAAGT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58104260 247 - 182113224 TGGA---CTGGACTTGTCTGACAGGAGGAATAGGTAGAAAATATAATCCAGCATCCC-TACAGTTATCATTGTCACTCAAACTGAATTGCTGAATTAAAA----TACAGTCGTGTAAAAAG-AT----GCATTATCTCATTCTTCTAGATGTTTATTTTTATTT-----C-AGACTCA-----------------TCCAACGATGCGGCCAC-ATAATTATTGTTATATAACAA-TATTCTG--------------------TA--------CCTACACTATACTCCTTTCC-AGTTTCTATTAGAATTCACCT----- i mm10.chr2 C 0 C 0 s canFam3.chr30 26790013 294 - 40214260 TGGAAATGTGGTGACATGTAACAAGAGGAATAAACATGAAATACAGTCCAACATTCTCTACAATTTTTATTGCCACTAAACTCTAGTTGTTGAATTTTAAAAA-TATA--TATGCAAAAATGTT--GAGTATTAT---ACTTTTATAGCTGTACATTATCATTTCAAATC-AAGCTCATA----GTTC------ATCCAGCAATGCTGTCCATATAAAAA-TGTTAAGCTCTAA-TTTTCTATCAATAGTATATTATCATTATG----TTCATATATGCCACAATTCTATCTGAGTTTCCATCAGAAATCAGCTACAGT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1056086 289 + 2868945 TGGAAATGTGGTCATGTCTGACAGGAAGAATAGACAT-AAATATAATCCAACTTTCTCTACAATTA--ATTACCATTAGACCCTAGTTGTTGAATTAGCAAA--TACA-------AAAAAG-TT--GAGTATTAA---ACTCCTTTAGCTGTATATAGTCATTTCAAATC-AAACTTATAAAAAGTTT------GTCCAACAATGTGGACATTGTTAAAAATTTTAAGCTTTGA-TTTTTGGCAGTTAATAAGCTACCTATATA----TTCATATATGCCATTGTTCTTTCCATCTGAAAGAAAGAATTTGTCTAAAGT i dasNov3.JH579377 C 0 C 0 a score=100800.000000 s hg38.chr14_KI270725v1_random 139909 5 + 172810 ATTTT s panTro5.chr1 126765980 5 + 228573443 ATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378431 5 - 99763055 ATTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2505 5 + 21985 ATTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53524807 5 + 121039945 ATTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178449 5 - 169600520 ATTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856035 5 - 171882078 ATTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929133 5 + 40200012 ATTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4373709 5 - 7633303 ATTTT i cerAty1.NW_012000887v1 C 0 C 0 s papAnu3.chr7 140781600 5 - 162156779 ATTTT i papAnu3.chr7 N 0 C 0 s chlSab2.chr26 36170087 5 + 58131712 ATTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564520 5 - 2620224 ATTTT i manLeu1.NW_012108674v1 C 0 C 0 s nasLar1.chr7 130387975 5 - 153844193 ATTTT i nasLar1.chr7 N 0 C 0 s colAng1.NW_012121598v1 8393205 5 - 10629787 ATTTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976333 5 - 132174527 ATTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766506 5 + 21366645 ATTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289019 5 + 13033340 ATTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6368654 5 - 11604778 ATTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36203777 5 - 36342412 ATGTT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58104507 5 - 182113224 ATTTT i mm10.chr2 C 0 C 0 s canFam3.chr30 26790307 5 - 40214260 ATTTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1056375 5 + 2868945 ATTTT i dasNov3.JH579377 C 0 C 0 a score=179529.000000 s hg38.chr14_KI270725v1_random 139914 11 + 172810 TGTGTAAAAAT s panTro5.chr1 126765985 11 + 228573443 TGTGTAAAAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378436 11 - 99763055 TGTGTAAAAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2510 11 + 21985 TGTGTAAAAAT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53524812 11 + 121039945 TGTGTAAAAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178454 11 - 169600520 CTTGTAAAAAT i rheMac8.chr7 C 0 I 26 s macFas5.chr7 147856040 11 - 171882078 CTTGTAAAAAT i macFas5.chr7 C 0 I 26 s macNem1.NW_012010577v1 26929138 11 + 40200012 CTTGTAAAAAT i macNem1.NW_012010577v1 C 0 I 26 s cerAty1.NW_012000887v1 4373714 11 - 7633303 CGTGTAAAAAT i cerAty1.NW_012000887v1 C 0 I 26 s papAnu3.chr7 140781605 11 - 162156779 CGTGTAAAAAT i papAnu3.chr7 C 0 I 10238 s chlSab2.chr26 36170092 11 + 58131712 CGTGTAAAAAT i chlSab2.chr26 C 0 I 26 s manLeu1.NW_012108674v1 2564525 11 - 2620224 CGTGTAAAAAT i manLeu1.NW_012108674v1 C 0 I 26 s nasLar1.chr7 130387980 11 - 153844193 CGTGTAAAAAT i nasLar1.chr7 C 0 I 32825 s colAng1.NW_012121598v1 8393210 11 - 10629787 CGTGTAAAAAT i colAng1.NW_012121598v1 C 0 I 26 s rhiRox1.KN300076v1 2049618 11 + 2481265 CGTGTAAAAAT i rhiRox1.KN300076v1 N 0 I 13975 s calJac3.chr10 107976338 11 - 132174527 TGTGTAAAAAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766511 11 + 21366645 TGTGTAAAAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289024 11 + 13033340 GGTGTAAAAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6368659 11 - 11604778 TGTGTAAAAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36203782 11 - 36342412 TTTGAAAAATT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58104512 11 - 182113224 CTTATACATTT i mm10.chr2 C 0 I 4 s canFam3.chr30 26790312 11 - 40214260 CTTGTAAAACT i canFam3.chr30 C 0 I 3 s dasNov3.JH579377 1056380 11 + 2868945 CTTATAAAATT i dasNov3.JH579377 C 0 I 4 a score=4388727.000000 s hg38.chr14_KI270725v1_random 139925 333 + 172810 TAG----TAACAGGAAAATAGATAACTGCttccaatatgtag--------aagtcattactacagctttgcctattaa----------cacatacacactatttcttcatgtcccagatgttcaggtatatgggaatgaaa-----caatgagttggaacctcttgattcagttattctggtgacaaacaatgtgtatagctcattgacgattgtttaacccttgataaaatgTGGCTGCAATTGTTACTTGCAGATGTAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTGCATTGTATTTGTTATTCTTGATATCA--GAAATGTGTTAA----------------GAAATATGCCACTAACTGGGTGTGCTCC s panTro5.chr1 126765996 339 + 228573443 TAGATAGTAACAGGAAAATAGATAACTGCttctaataggtag--------aagtcattactacagctttgcctattaa----------cacatacacactatttcttcatgtcccagatgttcaggtatatgggaatgaaaaaaa-taatgagttggagcctcttgattcagttattctggtgacaaacaacctgtatagctcattgacgattgttttaccctcgacaaa--gcagctgcaattgttacttgcagatgtagccacgcttaa------tttcttttcTCCACTCCTCACTGCATTGTATTTGTTATTCTTGATATGA--GAAATGTGTTAA----------------GAAACTTGCCACTAACTGCATGTGCTCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378447 336 - 99763055 TAGATAGTAACAGGAAAATAGATAACTGCttctaataggtag--------aagtcattactatagctttgcctattaa----------cacatacgcactatttcttcatgtcccagatgttcaggcatatgggaatgaaaaaaattaatgagttggaacctcttgattcagttattctgt---aaaacaatctgtatagctcattgatgattgttttacccttgacaaa--gtggCTGCAATTGTTACTTGCAGATGTAGCCACACTTAA-------TTCTTTTCTCCACTCCCCACTGCATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTGCATGTGCTCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2521 338 + 21985 TAGATAGTAACAGGAAAATAGATAACTGCttccaataggtag--------aagtcattactacagctttgcctattaa----------cacatacacactatttcttcatgtcccagatgttcaggtacatgggaatgaaacaaattaatgagttggaacctcttgattcagttattctggtgacaaacaatgtgtatagctcattgacgattgttttacccttgacaaa--gtggctgcaattgttacttgcagatgtagccacacttaa------tttcttttcTCCACTCCCCACTGCATTGTATTTGTTATTCTTGATAT-A--GAAATGTGTTAA----------------GAAACATGCCACTAACTG-GTGTGCTCC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53524823 339 + 121039945 TAGATAGTAACAGGAAAATAGATAACTGCTTCTAATAGGTAG--------AAGTCATTACTACAGCTTTGCCTATTAA----------CACATACACACTATTTCTTCATGTCCCAGATGTTCAGGCATATGGGAATGAAAAAAATTAATGAGTTGGAACCTCTTGATTCAGTTATTCTGGTGACAAACAATCTGTATAGCTCATTGATGATTCTTTTACCCTTGATAAA--GTGGCTGCAATTGTTACTTGCAGATGTAACCACACTTAA-------TTCTTTTCTCCACTCCCCAGTGCATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTGCATGTGCTCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178491 325 - 169600520 ----TAGTAATAGGAAAATAGATAACT-----------GTAG--------AAGTTATTACTACAGCTttgcctattaa----------tacatacacactagttcttcatgttccagatgttcaggcatatgggaatgaaaaaaattaatgagctggaacctcttgattcagttattctggtgacaaacaatctgtatagctcattgatgattgttttatctttgacaaa--gtggCTGCAATTGTTACTCGCCGGTGCAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTGAATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTACAAGTGCTCC i rheMac8.chr7 I 26 C 0 s macFas5.chr7 147856077 325 - 171882078 ----TAGTAATAGGAAAATAGATAACT-----------GTAG--------AAGTTATTACTACAGCTttgcctattaa----------tacatacacactagttcttcatgttccagatgttcaggcatatgggaatgaaaaaaattaatgagctggaacctcttgattcagttattttggtaacaaacaatctgtatagctcattgatgattgttttatccttgacaaa--gtggCTGCAATTGTTACTCGCCGGTGCAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTGAATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTACAAGTGCTCC i macFas5.chr7 I 26 C 0 s macNem1.NW_012010577v1 26929175 324 + 40200012 ----TAGTAATAGGAAAATAGATAACT-----------GTAG--------AAGTTATTACTACAGCTttgcctattaa----------tacatacacactagttcttcatgttccagatgttcaggcatatgggaatg-aaaaaattaatgagctggaacctcttgattcagttattctggtgacaaacaatttgtatagctcattgatgattgttttatccttgacaaa--gtggCTGCAATTGTTACTCGCCGGTGCAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTGAATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTACAAGTGCTCC i macNem1.NW_012010577v1 I 26 C 0 s cerAty1.NW_012000887v1 4373751 325 - 7633303 ----TAGTAATAGGAAAATAGATAACT-----------GTAG--------AAGTTATTACTACAGCTTtgcctattaa----------cacatacacactagttcttcatgtcccagatgttcaggcatatgggaatgaaaaaaattaatgagctggaacctcttgattcagttattctggtgacaaataatctgtatagctcattgatgattgttttatccttgacaaa--gtggCTGCAATTGTTACTCGCCGGTGCAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTGAATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTACAAGTGCTCC i cerAty1.NW_012000887v1 I 26 C 0 s chlSab2.chr26 36170129 324 + 58131712 ----TAGTAATAGGAAAATAGATAACT-----------GTAG--------AAGTTATTACTACAGCTTtgcctattaa----------cacatacacact-tttcttcatgtcccagatgttcaggcatatgggaatgaaaaaaattaatgagctggaacctcttgattcagttattctggtgacaaacaatctgtatagctcattgatgattgttttatccttgacaaa--gtggCTGCAATTGTTACTCGCCGATGCAGCCACACTTAA------TTTCTTTTCTTCACTCCCCACTGAATTGTATTTGTAATTCTTGATATGA--GAAATGTGGTAA----------------GAAACATGCCACTAACTACAAGTGCTCC i chlSab2.chr26 I 26 C 0 s manLeu1.NW_012108674v1 2564562 325 - 2620224 ----TAGTAATAGGAAAATAGATAACT-----------GTAG--------AAGTTATTACTACAGCTTtgcctattaa----------cacatacacactagttcttcatgtcccagatgttcagacatatgggaatgaaaaaaattaatgagctggaacctcttgattcagttattctggtgacaaacaatctgtatagctcattgatgattgttttatccttgacaaa--gtggCTGCAATTGTTACTCGCCGGTGCAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTGAATTGTATTTGTTATTCTTGATACGA--GAAATGTGTTAA----------------GAAACATGCCACTAACTACAAGTGCTCC i manLeu1.NW_012108674v1 I 26 C 0 s colAng1.NW_012121598v1 8393247 325 - 10629787 ----TAGTAATAGGAAGATAGATAACT-----------GTAG--------AAGTTATTACTACAACTTtgcctattaa----------cacatacacactatttcttcatgtcccagatgttcaggcatatgggaatgaaaaaaattaatgagctggaacttcttgattcagttattctggtgacaaacaatctgtatagctcattgatgattgttttatccttgacaaa--gtggctgcaattgttacttgcagatgcagccacacttaa------tttcttttcTCCACTCCCCACTGAACTGTATTTGTTATTCTGGATACGA--GAAATGTGTTAA----------------GAAACATGACGCTAACTACAAGTGCTCC i colAng1.NW_012121598v1 I 26 C 0 s calJac3.chr10 107976349 340 - 132174527 TAGATAGTAATGAGATAATAGATAACTGCTTCTAATAGGTAG--------AAGTCATTAGCACTGCTTTTCTTATTAA----------CACATACTCACTATTTCTTCAAGTCCCAGATGTTCAGGCATATGGGAATGAAAAAAATTAATGAGTTGGAACCTCTTGATTTAGTTATTCTGGTGACAAACAATCTGTATAGCTCATTGATGATTGTTTTACCCTTGACAAA--GTGGCTGCAATTGTTACTTGCAGATGAAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTTCATTGTATTTGTTATTCCCGATCAGA--GAAATGAGTTAA----------------GAAACATGCCACTAACTGCATGTGCTCC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766522 336 + 21366645 TTGATAGTAATGAGAAAATAGATAACTGCTTCTAATAGGCAG--------AAGTCATTACCACTGCTTTTCCTATTAA----------CATATACTCACTATTTCTTCATGTCCCAGATGTTCAGGCATATGGGAATGAAAAAAATTAATGAGTTGGAACCTCTTGATTTAGTTATTCTGGTG----ACAATCTGTATAGCTCATTGATGATTGTTTTACCCTTGACAAA--GTGGCTGCAATTGTTACTTGCAGACGAAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTTAATTGTATTTGTTATTCCTGATCAGA--GAAATGAGTTAA----------------GAAACATGCCACTAACTGCATGTGCTCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289035 340 + 13033340 TTGATAGTAATGAGAAAATAGATAACTGCttctaataggtag--------aagtcattaccactgcttttcctattaa----------cacatactcactatttcttcatgtcccagatgttcaggcatatgggaatgaaaaaaattaatgagttggaacctcttgatttagttattctggtgacaaacaatctgtatagctcattgatgattgttttacccttgacaaa--gtagCTGCAATTGTTACTTGCAGATGAAGCCACACTTAA------TTTCTTTTCTCCACTCCCCACTTAATTGTATTTGTTATTCCTGATCAGA--GAAATCAGTTAA----------------GAAACATGCCACTAACTGCATGTGCTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6368670 340 - 11604778 TAGACAGTAATGAGAAAATAGATAACTGCttctaataggtag--------aagtcattaccactgcttttcctattaa----------cacatactcactatttcttcatgtcccagatgttcaggcatatgggaatgaaaaaaattaatgagttggaacctcttgatttagttattctggtgacaaacaatctgtatagctcactgatgattgttttacccttgacaaa--gtggCTGCAATTGTTACTTGCAGATGAAGCCACATTTAA------TTTCTTTTCTCCACTCCCCACTTCATTGTATTTGTTATTCCTGATCAGA--GAAATGAGTTAA----------------GAAACATGCCACTAACTGCATGTGCTCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36203793 332 - 36342412 TAGATCATGAAGAGAAAATAGATAACTGCTTCTAATAGGTGG--------AAATCATTACCACTGCGTTGTCTATTAA----------CATGTA--CACTATTTCTTTGTGTTCCAGATGTTCAGGCATATGGGAATGAAAAAAATCAATGAGTTGGAACTTCTTGATTTAGTTATTCTGGTTACAAACAATCTATATAGCTCATTGATGATTGTTTTACCCTTGACAAA--GGGGCTTCGATTGTTACTTGCAGATGTAGTCATGCTTAA------TTTCTTTTCCCTGTCCCCTACTCCATTGCATTTGTGATTCTGGATC--------ATGCGTTAA----------------GAAACATGTCACTAACTACATGGGCTCC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58104527 328 - 182113224 ----TGGCAAAGGGGAAACACATTACTACCTCTAGTAGGTAG--------AAGCCATAATCACTTGCTTGCTTGATAA---------------ACACACTGTTTCTT-GTGTACCAGGTGTCCAGGCACATGGGAAC-AAAAAAGTCAATGAGTTGAAAATTCTTGATCCTGTTATTCTAGTAGAGCGCAGTCTGTAGAGCTCATTGATGATGGCTTTGCCATTGTAACA--G-------GACTGTGACTTGCTGATGTTGCTAAGCTGACCATGACCTCCTTTTCTCCATTCTCCATCCACTGGGACTTTTTGTTTTTGATCACA--GAGATGGGTTAA----------------AATATATGCTCTTACATACATGTGCCCC i mm10.chr2 I 4 C 0 s canFam3.chr30 26790326 333 - 40214260 ----TAGTAAAGAGAAAATGGATAACTTCATGTAGTAGGTAG--------AAGTCACTACTGCTGAATAGCCTATTAA----------CACATACACACTGTTTCTTTGTGTCCCAGATGTTCAGGCATATGGGAATGAAAAAAATCAATGAATTGGAACCTTTTGATTCTGTTATTCTGCT-----------------GCTCATTGATGATTGTTTTACCCTTGACAAA--GTGGCTACAATTGTTACTTGCAGATGTAGCTACAGTTAA------TTTCTTTTCTCAATTCCCCACACCAC----TTTGTCATTCTGGATCAGAAGGAAAAAAAACAAAAAACAAAAAAAACCCAAAACATACCACTAACTGCATGTGCTCT i canFam3.chr30 I 3 C 0 s dasNov3.JH579377 1056395 350 + 2868945 ----TAGCAAAGAGAAAACAAATGAGTGTTTCTAGTAGGTAGAAGTCATTAAGTCATTACCACAGCATTGCCTATTAACACGCACACACACACACACACCATTTCTCTGTGTCCCAGATGTTTAGGCATATGGGAATG-AAAAACTCAATGAGTTGGAACCTCTTGATTCAGTTATTCTGGTGACAAACAATCTGTATAGCTCATTGATGATTGTTTTACCCTTGACAAA--GCAGCTGTAATTGTTACTTGCAGATGTAGTCATGCTAAA------TTTCTTTTCTCCA---ACCTGTCCATTGTATTTGTTATTCTGGATCAGA--GAAATGAATTAA----------------GAAACATGCCTCTAGCTGCATGTGCTCC i dasNov3.JH579377 I 4 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=17100.000000 s hg38.chr14_KI270725v1_random 140258 1 + 172810 C s panTro5.chr1 126766335 1 + 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378783 1 - 99763055 C i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2859 1 + 21985 C i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525162 1 + 121039945 C i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178816 1 - 169600520 C i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856402 1 - 171882078 C i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929499 1 + 40200012 C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374076 1 - 7633303 C i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170453 1 + 58131712 C i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564887 1 - 2620224 C i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393572 1 - 10629787 C i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976689 1 - 132174527 C i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766858 1 + 21366645 C i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289375 1 + 13033340 C i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369010 1 - 11604778 C i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204125 1 - 36342412 C i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26790659 1 - 40214260 C i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1056745 1 + 2868945 C i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C a score=36210.000000 s hg38.chr14_KI270725v1_random 140259 3 + 172810 TAT s panTro5.chr1 126766336 3 + 228573443 TAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378784 3 - 99763055 TAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2860 3 + 21985 TAT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525163 3 + 121039945 TAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178817 3 - 169600520 TAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856403 3 - 171882078 TAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929500 3 + 40200012 TAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374077 3 - 7633303 TAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170454 3 + 58131712 TAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564888 3 - 2620224 TAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393573 3 - 10629787 TAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976690 3 - 132174527 TAT i calJac3.chr10 C 0 T 1526 s saiBol1.JH378136 10766859 3 + 21366645 TAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289376 3 + 13033340 TAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369011 3 - 11604778 TAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204126 3 - 36342412 TAC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26790660 3 - 40214260 TCT i canFam3.chr30 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e dasNov3.JH579377 1056746 0 + 2868945 C a score=12376.000000 s hg38.chr14_KI270725v1_random 140262 1 + 172810 A s panTro5.chr1 126766339 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378787 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2863 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525166 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178820 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856406 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929503 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374080 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170457 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564891 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393576 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10766862 1 + 21366645 A i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 9289379 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369014 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204129 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26790663 1 - 40214260 A i canFam3.chr30 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e dasNov3.JH579377 1056746 0 + 2868945 C e calJac3.chr10 107976693 1526 - 132174527 T a score=12000.000000 s hg38.chr14_KI270725v1_random 140263 1 + 172810 C s panTro5.chr1 126766340 1 + 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378788 1 - 99763055 C i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2864 1 + 21985 C i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525167 1 + 121039945 C i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178821 1 - 169600520 C i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856407 1 - 171882078 C i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929504 1 + 40200012 C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374081 1 - 7633303 C i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170458 1 + 58131712 C i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564892 1 - 2620224 C i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393577 1 - 10629787 C i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 9289380 1 + 13033340 C i cebCap1.NW_016107324v1 C 0 I 76 s aotNan1.NW_018501505v1 6369015 1 - 11604778 C i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204130 1 - 36342412 C i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26790664 1 - 40214260 C i canFam3.chr30 C 0 I 5 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e dasNov3.JH579377 1056746 0 + 2868945 C e saiBol1.JH378136 10766863 1 + 21366645 I e calJac3.chr10 107976693 1526 - 132174527 T a score=61386.000000 s hg38.chr14_KI270725v1_random 140264 10 + 172810 AATTAGCTAC s panTro5.chr1 126766341 10 + 228573443 AATTAGCTAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378789 10 - 99763055 AATTAGCTAC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2865 10 + 21985 AATTAGCTAC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525168 10 + 121039945 AATTAGCTAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178822 10 - 169600520 GATTAGCTAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856408 10 - 171882078 GATTAGCTAC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929505 10 + 40200012 GATTAGCTAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374082 10 - 7633303 GATTAGCTAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170459 10 + 58131712 GATTAGCTAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564893 10 - 2620224 GATTAGCTAC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393578 10 - 10629787 GATTAGCTAC i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36204131 8 - 36342412 --TCAACTGT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26790670 8 - 40214260 GATTAGCT-- i canFam3.chr30 I 5 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e dasNov3.JH579377 1056746 0 + 2868945 C e saiBol1.JH378136 10766863 1 + 21366645 I e aotNan1.NW_018501505v1 6369016 0 - 11604778 C e cebCap1.NW_016107324v1 9289381 76 + 13033340 I e calJac3.chr10 107976693 1526 - 132174527 T a score=425003.000000 s hg38.chr14_KI270725v1_random 140274 67 + 172810 AGAAAGAGGTGATAACTCATATTATTTACAAAGATTACA------AGTATAAAGA----ACATTAAAATAA-TCATTT s panTro5.chr1 126766351 67 + 228573443 AGAAAGAGGTGATGACTCATATTATTTACAAATATTAGA------AGTAAAAAGA----ACCTTAAAATAA-TCATTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378799 67 - 99763055 AGAAAGAGGTGATAACTCATATTATTTACAAATATTACA------AGTATAAGGA----ACCTAAAAATGA-TCATTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2875 66 + 21985 AGAAAGAGGTGATAACTCATATTATTTACAAATATTACA------AGTATAAAGA----AC-TTAAAATAA-TCATTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525178 67 + 121039945 AGAAAGAGGTGATAACTCATATTATTTACAAATATTACA------AGTATAAGGA----ACCTAAAAATGA-TCATTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178832 67 - 169600520 AGAAAGAGGTGATAACCCATATTATTTACAAATATTACA------AGTATAAGGA----ATCTTAAAATGA-TCATTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856418 67 - 171882078 AGAAAGAGGTGATAACCCATATTATTTACAAATATTACA------AGTATAAGGA----ATCTTAAAATGA-TCATTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929515 67 + 40200012 AGAAAGAGGTGATAACCCATATTATTTACAAATATTACA------AGTATAAGGA----ATCTTAAAATGA-TCATTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374092 67 - 7633303 AGAAAGAGGTGATAACCCATATTATTTACAAATATTACA------AGCATAAGGA----ATCTTAAAATGA-TCATTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170469 67 + 58131712 AGAAAGAGGTGATAACCCATATTATTTACAAATATTACA------AGTATAAGGA----ATCTTAAAATGA-CCATTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564903 67 - 2620224 AGAAAGAGGTGATAACCCATATTATTTACAAATATTACA------AGTATAAGGA----ATCTTAAAATGA-TCATTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393588 67 - 10629787 AGAAAGAGGTGATAACTCATATTATTTACAAATATTACA------AGTATAAGGA----ACCTTAAAATGA-TCATTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975167 67 - 132174527 AGAAAGAGGTGATAATTCATATTATTTATAAATGTTACA------AGTATAAGGA----ACCTTAAAATGA-TCATTT i calJac3.chr10 T 1526 C 0 s otoGar3.GL873530 36204139 68 - 36342412 AGCTAAAAAACACTATGAGTATATTCTATTGATGCTACATTAGATAATATAATGC----ACT---AAATG---CAGTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26790678 68 - 40214260 ----AAGGGATATTATTAGTGCTTCTTATTGAAACCAGA------TGAGAAAAAATGATACATTAAATCCAGTCATTT i canFam3.chr30 C 0 I 236 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e dasNov3.JH579377 1056746 0 + 2868945 C e saiBol1.JH378136 10766863 1 + 21366645 I e aotNan1.NW_018501505v1 6369016 0 - 11604778 C e cebCap1.NW_016107324v1 9289381 76 + 13033340 I a score=140930.000000 s hg38.chr14_KI270725v1_random 140341 34 + 172810 TCTA----------TAATT-----TGTT--------------------ATCAATTGTTAAG----------------------TTTATTTT s panTro5.chr1 126766418 34 + 228573443 TCTA----------TAATT-----TGTT--------------------ATCAATTGTTAAG----------------------TTTATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378866 37 - 99763055 TCTA----------TAATT-----TATTATA-----------------ATAAATTGTTAAA----------------------TTTATCTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2941 34 + 21985 TCTA----------TAATT-----TGTT--------------------ATCAATTGTTAAG----------------------TTTATTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525245 37 + 121039945 TCTA----------TAATT-----TATTATA-----------------ATAAATTTTTAAA----------------------TTTATCTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178899 32 - 169600520 TCTA----------TAATT-----TA----------------------ATAAATTGTTATA----------------------TTTATTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856485 32 - 171882078 TCTA----------TAATT-----TA----------------------ATAAATTGTTATA----------------------TTTATTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929582 32 + 40200012 TCTA----------TAATT-----TA----------------------ATAAATTGTTATA----------------------TTTATTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374159 32 - 7633303 TCTA----------TAATT-----TA----------------------ATAAATTGTTATA----------------------TTTATTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170536 32 + 58131712 TCTA----------TAATT-----TA----------------------ATGAATTGTTATA----------------------TTTATTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2564970 32 - 2620224 TCTA----------TAATT-----TA----------------------ATAAATTGTTATA----------------------TTTATTTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393655 37 - 10629787 TCTA----------TAATTTATTATA----------------------ATAAATTGTTATA----------------------TTTATTTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975234 38 - 132174527 TCTG----------Gaatt-----tattata-----------------ataaattattaaaG---------------------TCTACCTT i calJac3.chr10 C 0 C 0 s otoGar3.GL873530 36204207 86 - 36342412 TTTAGTGAAGAACTTTATT-----CATTTCAGGGAACAAAGTTTTGATAAAAATTGTGAAGAAACCTTTGCTTGTCTATTCGttttgtttt i otoGar3.GL873530 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e dasNov3.JH579377 1056746 0 + 2868945 C e canFam3.chr30 26790746 236 - 40214260 I e saiBol1.JH378136 10766863 1 + 21366645 I e aotNan1.NW_018501505v1 6369016 0 - 11604778 C e cebCap1.NW_016107324v1 9289381 76 + 13033340 I a score=7847.000000 s hg38.chr14_KI270725v1_random 140375 1 + 172810 A s panTro5.chr1 126766452 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378903 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2975 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525282 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178931 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856517 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929614 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374191 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170568 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565002 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393692 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107975272 1 - 132174527 A i calJac3.chr10 C 0 I 1422 s otoGar3.GL873530 36204293 1 - 36342412 g i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1056746 1 + 2868945 A i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58104855 0 - 182113224 C e canFam3.chr30 26790746 236 - 40214260 I e saiBol1.JH378136 10766863 1 + 21366645 I e aotNan1.NW_018501505v1 6369016 0 - 11604778 C e cebCap1.NW_016107324v1 9289381 76 + 13033340 I a score=9555.000000 s hg38.chr14_KI270725v1_random 140376 1 + 172810 A s panTro5.chr1 126766453 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378904 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2976 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525283 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178932 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856518 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929615 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374192 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170569 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565003 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393693 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36204294 1 - 36342412 a i otoGar3.GL873530 C 0 I 284 s mm10.chr2 58104855 1 - 182113224 A i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1056747 1 + 2868945 A i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e canFam3.chr30 26790746 236 - 40214260 I e saiBol1.JH378136 10766863 1 + 21366645 I e aotNan1.NW_018501505v1 6369016 0 - 11604778 C e cebCap1.NW_016107324v1 9289381 76 + 13033340 I e calJac3.chr10 107975273 1422 - 132174527 I a score=20512.000000 s hg38.chr14_KI270725v1_random 140377 3 + 172810 CAA s panTro5.chr1 126766454 3 + 228573443 CAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378905 3 - 99763055 CAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2977 3 + 21985 CAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525284 3 + 121039945 CAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178933 3 - 169600520 CAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856519 3 - 171882078 CAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929616 3 + 40200012 CAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374193 3 - 7633303 CAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170570 3 + 58131712 CAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565004 3 - 2620224 CAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393694 3 - 10629787 CAA i colAng1.NW_012121598v1 C 0 C 0 s mm10.chr2 58104856 3 - 182113224 CAT i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1056748 3 + 2868945 CAC i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e canFam3.chr30 26790746 236 - 40214260 I e saiBol1.JH378136 10766863 1 + 21366645 I e otoGar3.GL873530 36204295 284 - 36342412 I e aotNan1.NW_018501505v1 6369016 0 - 11604778 C e cebCap1.NW_016107324v1 9289381 76 + 13033340 I e calJac3.chr10 107975273 1422 - 132174527 I a score=666026.000000 s hg38.chr14_KI270725v1_random 140380 78 + 172810 TTATCAATTAGCTACAGAACACGAGTAGTGTTTCTTACTTTAGCCTGATGTAAACATGTGAT-----------GCGGTAAT--ATAGTGAA s panTro5.chr1 126766457 78 + 228573443 TTATCAATTAGCTATGGAACACGAGCAGTGTTTCTTACTTTAGCCAGCTGTAAACATGTGAT-----------GCGGTAAT--ATAGTGAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378908 78 - 99763055 TTATTGATTAGCTACAGAATACGATTAGTGTTTCTTACTTTAGCCAGATGTAAACATGTGAT-----------GCAGTAAT--TTAGTGAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 2980 78 + 21985 TTATCAATTAGCTACAGAACACGAGTAGTGTTTCTTACTTTAGCCAGATGTAAACATGTGAT-----------GCGGTAAT--ATAGTGAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525287 78 + 121039945 TTATCGATTAGCTACAGAATATGATTAGTGTTTCCTACTTTAGCCAGATGTAAACATGTAAT-----------GCAGTAAT--TTAGTGAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146178936 78 - 169600520 TTATCAATTAGCTACAGAACATGATTAGTGTTTACTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856522 78 - 171882078 TTATCAATTAGCTACAGAACATGATTAGTGTTTACTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929619 78 + 40200012 TTATCAATTAGCTACAGAACATGATTAGTGTTTACTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374196 78 - 7633303 TTATCAATTAGCTACAGAACACGATCAGTGTTTACTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170573 78 + 58131712 TTATCAATTAGCTACAGAACACGATTAGCGTTTACTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565007 78 - 2620224 TTATCAATTAGCTACAGAACACGATCAGTGTTTGCTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393697 78 - 10629787 TGATCGATTAGCTACAGAACACGATTAGTGTTTACTATTTTAGCCAGATGTAAAAATGTGAC-----------GCAGTAAT--TCAGTGAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976695 75 - 132174527 TTAACGACCAGCTAAAGAACACTATTAGTGTTTCCTACTTTAGCCAGATGAAAAAATGTGAT-----------CCAGTAAT--TTAGT--- i calJac3.chr10 I 1422 C 0 s saiBol1.JH378136 10766864 75 + 21366645 TTATCGATTAGCTAAAGAACACTATTAGTGTTTCCTACTTTAGCCAGATCAAAAAATGTGAT-----------CCAGTTAT--TTAGT--- i saiBol1.JH378136 I 1 C 0 s aotNan1.NW_018501505v1 6369016 78 - 11604778 TTATCGATTAGCTAAAGAACACTATTAGTGTTTCCTACTTTAGCCAGATGAAAAAATGTGAT-----------CCAGTAAT--TTAGTGAA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58104859 86 - 182113224 GTATTTATTAGCTAAGCAACACTGCAAGTCTTTCTTGTCAAAGTCAGAAGATGAAGTGTGACAT--CTTA---ACTGTAATGATTAATGGA i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1056751 89 + 2868945 TTATTGATTAGCCAAGGAATACTATTAGTATTTCCTATTGAAACCAGATGAGAAAACATGACAGGATTTAAATGCAGTAAT--TTAGGGAA i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e canFam3.chr30 26790746 236 - 40214260 I e otoGar3.GL873530 36204295 284 - 36342412 I e cebCap1.NW_016107324v1 9289381 76 + 13033340 I a score=432220.000000 s hg38.chr14_KI270725v1_random 140458 35 + 172810 GAATATTACTCACTTCAGAGGATAGGGCTTTGGTC s panTro5.chr1 126766535 35 + 228573443 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55378986 35 - 99763055 GAATATTACTCACTTCAGAGGATAGGGCTTAGGTC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3058 35 + 21985 GAATATTACTCACTTCAGGGGATAGGGCTTTGGTC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525365 35 + 121039945 GAATATTACTCACTTCAGGGGATAGGGCTTTGGTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179014 35 - 169600520 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856600 35 - 171882078 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929697 35 + 40200012 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374274 35 - 7633303 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170651 35 + 58131712 GACTATTACTCATTTCAGGGGATAGGGCTTTGGTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565085 35 - 2620224 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393775 35 - 10629787 GACTATTACTCACTTCAGGGGATAGGGCTTTGGTC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976770 35 - 132174527 GAATGTTACTCACTTCAGGGGATAGGGCTTTGGTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766939 35 + 21366645 GAATGTTACTCACTTCAGGGGATAGGGCTTTGGTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289457 35 + 13033340 GAATGTTACTCACTTCAGGGGATAGGGCTTTGGTC i cebCap1.NW_016107324v1 I 76 C 0 s aotNan1.NW_018501505v1 6369094 32 - 11604778 ---TGTTACTCACTTCAGGGGATAAGGCTTTGGTC i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58104945 35 - 182113224 TGCTATTACTCACTGCAGGGAATAGGGGTTTGGTC i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1056840 34 + 2868945 GATCTTTACTCATTTCTG-GGACAGGGCTTTGGTC i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e canFam3.chr30 26790746 236 - 40214260 I e otoGar3.GL873530 36204295 284 - 36342412 I a score=140459.000000 s hg38.chr14_KI270725v1_random 140493 11 + 172810 AAAAATTTTGA s panTro5.chr1 126766570 11 + 228573443 AAGAATTTTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379021 11 - 99763055 AAGAATTTTGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3093 11 + 21985 AAGAATTTTGA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525400 11 + 121039945 AAGAATTTTGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179049 11 - 169600520 AAGAATTGTGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856635 11 - 171882078 AAGAATTGTGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929732 11 + 40200012 AAGAATTGTGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374309 11 - 7633303 AAGAACTGTGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170686 11 + 58131712 AAGAATTGTGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565120 11 - 2620224 AAGAATTGTGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393810 11 - 10629787 AGGAATTGTGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976805 11 - 132174527 AAGAATTGTGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766974 11 + 21366645 AAGAATTGTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289492 11 + 13033340 AAGAATTGTGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369126 11 - 11604778 AAGAATTGTGA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58104980 11 - 182113224 AAGAACTGTGA i mm10.chr2 C 0 C 0 s canFam3.chr30 26790982 11 - 40214260 aaATATTTTGA i canFam3.chr30 I 236 C 0 s dasNov3.JH579377 1056874 11 + 2868945 AAGAATAGTGA i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e otoGar3.GL873530 36204295 284 - 36342412 I a score=854582.000000 s hg38.chr14_KI270725v1_random 140504 86 + 172810 GAAACTCTTGAAAAAGGAAAAGAA------AACCCCC--CGTGATAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA s panTro5.chr1 126766581 85 + 228573443 GAAACTCTTGAAAAAGGAAAAGAA------AACCCCC---ATGATAGTAATACAATCCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379032 86 - 99763055 GAAACTCTTGAAAAAGGAAAAGAA------AACCCCC--CACGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3104 85 + 21985 GAAACTCTTGAAAAAGGAAAAGAA------AACCCCC---ATGATAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525411 85 + 121039945 GAAACTCTTGAAGAAGGAAAAGAA------ACCCCCC---ATGAGAGTAATACAATTCCAAAAGCAAATGGAGA---AAAAATGTAAAT----------------------------------------------------------------ATATTAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179060 94 - 169600520 GAAACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856646 94 - 171882078 GAAACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929743 94 + 40200012 GAAACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAC----------------------------------------------------------------GTATTAAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374320 94 - 7633303 GAAACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170697 94 + 58131712 GAAACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565131 94 - 2620224 GAAACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393821 94 - 10629787 GACACTCTTGAAAAAGGAAAAGAACTCCACACCCCCCACCATGACAGTAATACAATTCCAAAAGCAAAAGGAGA---AAAAATATAAAT----------------------------------------------------------------GTATTAAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976816 85 - 132174527 GAAGCTCTTGAAAAAGGAAAAGAA------AATCCTT--CATAACAAAAATACAATTCCAAAAGCAAAAGGAG----AAAAATGTAAAT----------------------------------------------------------------GTGTTAAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10766985 85 + 21366645 GAAGCTCTTGAAAAAGGAAAAGAA------AACCTTC--CATAACAATAATACAATTCCAAAAGCAAAAGGAG----AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289503 85 + 13033340 GAAGCTCTTGAAAAAGGAAAAGAA------AGCCTTC--CATAACAGTaatgcaattgcaaaagcaaaaggag----aaaaatgcaaat----------------------------------------------------------------gtattaaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369137 85 - 11604778 GAAGCTCTTGAAAAAGGAAAAGAA------AACCCTC--CATAACAGTAATACAATTCCAAAAGCAAAAGGAG----AAAAATGTAAAT----------------------------------------------------------------GTATTAAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204579 87 - 36342412 AAAACTCTTAGAAAAGGTAAAGTA---CACAAGCCCA--AATGAT-GTAATATTTCTCTGAAAGCAAAAGGAA----AAAAATATAGAT----------------------------------------------------------------GTATATTT i otoGar3.GL873530 I 284 C 0 s mm10.chr2 58104991 43 - 182113224 GGAACTCTTTAAAAG--------------------------------------------AAAAACAGAATTGAA---GAAAATTTAAA-----------------------------------------------------------------------AA i mm10.chr2 C 0 C 0 s canFam3.chr30 26790993 158 - 40214260 ACAACTCTTGAGAAAGGATAAGAT-AATATAGATCCT--AATGATAGTTAAATTTTTCCAAAAGCAAATGAAAATGTAGACATATAAATTCAAATAGTATttttttttaattttaaggatttatttatttgggtggtgggagagggcaagagagtcttaaa i canFam3.chr30 C 0 I 117 s dasNov3.JH579377 1056885 89 + 2868945 GGAACTTTTGGAAAACAAAGGGAA---AACAAGCCTC--AGTGAAAGTACCATTTTTCTAAAACTAAAAGGAAA---ATAAATGTAAAG----------------------------------------------------------------GTGTGAGC i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=1570145.000000 s hg38.chr14_KI270725v1_random 140590 138 + 172810 TCAAAAAATATTTTAAGGTAAGGCAAAAGTAGGTACAGAAT---GGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAATCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATTAAA s panTro5.chr1 126766666 138 + 228573443 TCAAAAAATATTTTAAGGTAAGGCAAAAGTAGGTATAGAAC---TGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAATCAAAG----GAGAGGGAAAAATATGGTCGGTGAATA-TGGTTGCAATGCTAATTAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379118 137 - 99763055 TCAAAAAATATTTTAAGGTAAGGCAAAAGTAGGTATAGAAT---GGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAATCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3189 137 + 21985 TCAAAAAATATTTTAAGGTAAGGCAAAAGTAGGTATAGAAT---GGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAATCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525496 137 + 121039945 TCAAAAAATATTTTAAGGTAAGGCAAAAGTAGGTATAGAAC---GGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAATCAAAG----GAGAGGGAAAAATACGGTAGGTGAATA-TGGTTGTAATGCTAATT-TA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179154 136 - 169600520 T-AAAAAATATTTTAAGGTAAAGGAAAAGTAGGTATAGAAT---AGTGAGTCACATACAAA---TCG---TGAAAGTGAGTAATGGCCCAGAAAGCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856740 136 - 171882078 T-AAAAAATATTTTAAGGTAAAGGAAAAGTAGGTATAGAAT---AGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAAGCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929837 136 + 40200012 T-AAAAAATATTTTAAGGTAAAGGAAAAGTAGGTATAGAAT---AGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAAGCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374414 136 - 7633303 T-AAAAAATATTTTAAGGTAAAGGAAAAGTAGGTATAGAAC---AGTGAGTCACATATAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAAGCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170791 136 + 58131712 T-AAAAAATCTTTTAAGGTAAAGGAAAAGTAGGTATAGAAT---AGTGAGTCACATACAAA---TTG---TGAAAGTGAGTAATGGCTCAGAAAGCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTAATT-AA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565225 136 - 2620224 T-AAAAAATATTTTAAAGTAAAGGAAAAGTAGGTACAGAAC---AGTGAGTCACATATAAA---TTG---TGAAAGTGAGTAATGGCCCAGAAAGCAAAG----GAGAGGGAAAAATATGGTAGGTGAATA-TGGTTGCAATGCTGATT-AA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8393915 136 - 10629787 T-AAAAAATATTTTAAGATAAGGGAAAAGTAGGTATAGAAC---AGTGAGTCACATACAAA---TTG---TGAAAGCGAGTAATGGCCCAGAAAGCAAAG----GAGAGGGGAAAATATGGTAGGTGAATA-TGGTTGCAATGTTAATT-AA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107976901 137 - 132174527 TCAAAAAATATTTTAAGATAAGGGAAAAGAAGGTTTAGAAT---TGTGAGTCACATACAAA---TTG---TGAAGGTGAGTAATGGCCCAGAAATCAAAG----CAGAGGGGAAATTATGGTAGGTGAATA-TAGTTGCAATGCTACTT-GA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767070 137 + 21366645 TCAAAAAATATTTTAAGATAAGGGAAAAGAAGGTTTAGAAT---TGTGAGTCACAGACAAA---TTG---TGAAGGTGAGTAATGGCCCAGAAATCAAAG----CAGAGGGGAAACTATGGTTGGTGAATA-TAGTTGCAATTCTACTT-AA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289588 137 + 13033340 tcaaaaAATATTTTAAGATAAGGGAAAAGAAGGTTTAGAAT---TGTGAGTCACATACAAA---TTG---TGAAGGTGAGTAATGGCCCAGAAATCAAAG----CAGAGGGGAAAATATGGTTGGTGAATA-TAGTTACAATGCTACTT-AA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369222 137 - 11604778 TCAAAAAATATTTTAAGATAAGGGAAAAGAAGGTTTAGAAT---TGTGAGTCACATACAAA---TTG---TGAAGGTGAGTAATGGCCCAGAAATCAAAG----CAGAGGGGAAAATATGGTAGGTGAATA-TAGTTGTAATGCTACTT-AA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204666 136 - 36342412 T-CAAATATATTTTAAGATAAGGCAAAAATAAATATGGGAT---TGTAAATCATATAATAA---TTG---TTCAAGTGAGCAATGACCGAGAAATCCAGG----AAGAATAGAAGATAAGGTTAGGGAATA-TGGTTAAAATGGCAATT-AA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58105034 69 - 182113224 T-AAAAAC----------CAAAGGA------------------------------------------------------------GTTCAGAAAT---AA----GAAAGGGAATGAT---GTAGGTGGATA-TGGTCACAATGCTTAGT-GA i mm10.chr2 C 0 I 1648 s canFam3.chr30 26791268 140 - 40214260 TCAAATAGTATTTTAAGATCAGGCAAAGGTAGATGTGGATT---TGTGAGTCATATATGAA---TTGATTTGAACATGAACATTGACCCAGAAATCCAGT----TGGAAGG-AAAATAAGCTGGGTGAATAGTGGTTGGAGTGTTAATA-AA i canFam3.chr30 I 117 C 0 s dasNov3.JH579377 1056974 148 + 2868945 TCAAATGGTATTTTAAAAGAAACCAAAAGTATATACAGAATTGGTGTGAGTCACATACTGACTGTTG---TGAAAGTGAACAATGGCACAGATAACCAAGAAGAAAGAAGGAAAAATAAAGTCTGGAAATAATGGCTACAATGCTATTT-AA i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=2031333.000000 s hg38.chr14_KI270725v1_random 140728 179 + 172810 AAAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAATAAATAGA------GTGTTTATAACAGTATGCTTAATCTACTGGTGCTAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTTAT-TGT------GTAAAAATTTGCC s panTro5.chr1 126766804 185 + 228573443 AAAATGTTATTAGCAGCTAGCTCAATTCAAGCTCTGAATAAATAGAAATAGAGTGTTTATAACAGTATGCTTAATCTACAGGTGACAATAGTAAGATAATTGTTGAAATATACTTAAAAG-----AAAT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTTGT-TTT------GTAAAAATTTGCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379255 182 - 99763055 AAAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACACTTAATCTACTGATGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGCGAA---AGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTTGT-TTT------GTAAAAATTTGCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3326 185 + 21985 AAAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACGCTTAATCTACTGGTGATGATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTTGT-TGT------GTAAAAATTTGCC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525633 182 + 121039945 AAAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAATTAATAGAAATAGAGTGTTTATAACAGTACGCTTAATCTACTGGTGACAATATTAAGATCATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAA---AGAGAA-GG-AGAGACTATTGAACTTTTCTGGTTTGT-TTT------GTAAAAATTTGCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179290 181 - 169600520 AAAATGTTATTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147856876 181 - 171882078 AAAATGTTATTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26929973 181 + 40200012 AAAATGTTATTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374550 181 - 7633303 AAGATGTTGTTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36170927 181 + 58131712 AAAATGTGATTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565361 181 - 2620224 AAGATGTTGTTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAAAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8394051 181 - 10629787 AAAATGTTATTAGCAGCTTGCTCAATTCAAGCTTTGAATAAATAGAAATGGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAAGATTAAGATAATTGTTGAAATATACTTAAAAG-----AAGT-----TAGTGAAAGCAGAGAA-TG-AAAGACTATTGAACTTTTCTGGTTT-----T------ATAAAAATTTGCC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977038 190 - 132174527 ATGATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAAGAAATAGAAATAGAGTGTTTATAACAGTACTCTCAATCTACTGGTGACAATATTAAGACAATTGTTGATATATACTTAAAAGAAAAGAAGT-----TAGTGAAAGCAGAGAA-GG-AAAGCCTATTGAACTTTTATGGTTTGC-TTT------GTAAAAATGTTCC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767207 188 + 21366645 ATAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAAGAAATAGAA--AGAGTGTTTATATCAATACTCTTAATCTACTAGTGACAATATTAAGACAATTGTTGAAATATACTTAAAAGAAAAGAAGT-----TAGTGAAAGCAGAGAA-GG-AAAGACTATTGAACTTTTGTGGTTTGC-TTT------GTAAAAATGTTCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289725 190 + 13033340 ATAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAAGAAATAGAAATAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGACAATTGTTGAAATATACTTAAAAGAAAAGAAGT-----TAGTGAAAGCAGAGAA-GG-AAAGACTATTGAACTTTTATGGTTTGC-TTT------GTAAAAATGTTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369359 190 - 11604778 ATAATGTTATTAGCAGCTAGCTCAATTCAAGCTTTGAAGAAATAGAAACAGAGTGTTTATAACAGTACTCTTAATCTACTGGTGACAATATTAAGACAATTGTTGAAATATACTTAAAAGAAAATAAGT-----TAGTGTAAGCAGAGAA-GG-AAAGACTATTGAACTTTTATGGTTTGC-TTT------GTAAAAATGTTCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36204802 181 - 36342412 ATACTGCCTTTAGCAGCTAGCTCAATTTAAGCTTTGA---------------GTGTTTATAACACTACTTTTAATCTACAGATGACAATATGAAGACAAATGTTGGCATATAGTTAAAAGAAAGGAAAT-----TAGTAAAAGCAGACAA-TA-AGAGACAATTTAGCTTGTCTGTTTTTT-TTTTTTTTGATAAAAATTTTCC i otoGar3.GL873530 C 0 I 121 s canFam3.chr30 26791408 175 - 40214260 ATAACGTGATTGGCAGCTCACTCAGTT-------GGGAGAGGCAGAAAAGCAGTG------ACACTACATCTGATGTATGGATGACAATACAAAGGCTAATGTTAGAATATAATTTAAAAAGAAGAAAT-----TAG----AGCAAAGAA-TGAAAAGACAAATGAAATTGTCTATTTCATCCTT------GTGAAAATCTTCA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1057122 194 + 2868945 ATAATGTGGTTGGCACCTAGCTCAATTCAAGCTTGGAAGAAGAGGTTATATAGT-TTTATGACATTATTTTCAGTCAACAGATGACAATGTAAAGGCAAAAGTTGAAATACAGTTAAGAAAGA--AAGTAGTGATAGTGAAAGCAGAGAATTA-AAAGACCACTGAGCTTGACCAGTTTGTTTTT------GCGCGATTTTTAA i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I a score=1790676.000000 s hg38.chr14_KI270725v1_random 140907 167 + 172810 TGTATCCAACA-TACAGGCACAAAAATAAAATACTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTACTCCTACAAGCAAACTACGGCTAAAATATGCGATTCAATACAGATACTC-A---------TTTTTC----AAGTGTTTA s panTro5.chr1 126766989 163 + 228573443 TATGTCCAACA-TACAGGCACAAAAATAAAATATTGGAAATAG----CAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTGGGCCGTAGGCTGTATTTCTACAAGAAAACTTTGGCTAAAATATGCTATTCAATACAGATACTC-A---------TTTTTC----AAGTGTTTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379437 169 - 99763055 TATGTCCAACA-TACAGGCACACAAATAAAATATTGGAAATAAAGAACAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTATTCCTACAAGCAAACTTTGGCTAAAATATGTGATTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3511 164 + 21985 T-TATCCAACA-TACAGGCACAAAAATAAAATACTGGAAATAGAG--CAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTATTCCTACAAGCAAACTATGGCTAAAATATGCGATTCAATACAGATACTC-A---------TTTTTC----AAGTGTTTA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525815 169 + 121039945 TATGCCCAACA-TACAGGCACAAAAATAAAACATTGGAAATAGAGAACAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTATTCCTACAAGCAAACTTTGGCTAAAATATGTGATTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179471 169 - 169600520 TGTGTCCAACA-TACAGGCACAAAAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTATTTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAACTTTGGCTAAAACATGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147857057 168 - 171882078 TGTGTCCAACA-TACAGGCACAAAAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTA-TTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAACTTTGGCTAAAACATGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26930154 168 + 40200012 TGTGTCCAACA-TACAGGCACAAAAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTA-TTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAACTTTGGCTAAAACATGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374731 167 - 7633303 TATGTCCAACA-TACAGGCACAAAAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTA-TTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAAC-TTGGCTAAAATATGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36171108 168 + 58131712 TATGTCCAACA-TACAGGCACAAAAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTA-TTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAACTTCGGCTAAAATATGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565542 167 - 2620224 TATGTCCAACA-TACAGGCACAAAAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTA-TTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAACTT-GGCTAAAATACGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8394232 168 - 10629787 TATGTCCAACA-TACAGGCACAATAAT-AAATATTGGAAATAGAGAGCAAATCTTGGCCATTC-AAATGAGA-------GTTAGCTA-TTAATTCTTTGGTCATAGGCTGTATTCCTACAAGCAAACTTTGGCTAAAATATGTGACTCAATACAGATACTC-A-------TTTTTTTC----AAGTGTTTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977228 166 - 132174527 CATGTCCAACATTACATGCACAAAAATAAAATACTGAAAATAG----CAAATCTTGGCCATTC-AAATGAGA-------GTCAACTA-TTAATTCTTTGGCCATAGGCTCTATTTCTACAAGCAAACTTTAGCTAAAATATGTGACTCAATACAGATACTA-T-------TTTTTCCC----AAGAGTTTA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767395 167 + 21366645 CATGCCCAACATTACATGCACAAAAATAAAACACTGAAAATAG----CAAATCCTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTATTTCTACAAGCAAACTTTAGCTAAAATATGTGATTCAGTACAGATACTATT-------TTTTTTCC----AAGTGTTTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9289915 166 + 13033340 CATGTCCAACGTTACATACACACAAAAAAAATACTGAAAATAG----CAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTATTTCCACAAGCAAGCTTTAGCTAAAATATGTGATTCAATACAGATACTA-T-------TTTTTTCC----AAGTGTTTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369549 167 - 11604778 CATGTCCAACATTACATGCACAAAAATAAAATACTGAAAATAG----CAAATCTTGGCCATTC-AAATGAGA-------GTCAGCTA-TTAATTCTTTGGCCATAGGCTGTATTTCTATAAGCAAACTTTAGCTAAAATATGTGATTCAATACAGATACTATT-------TTTTTTTC----AAGTGTTTA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36205104 160 - 36342412 TATGCTCAATA-CATACGGTTAAAGACAAAATATTGGAAATAGAAA-GAAATCTTGGCCATTCTGAATGTCA-------GTCAGCTA-TTAATT-------------CTATATTCCTAGGAGCAAATTTCAGTTAAAGTAGGTGATATAACACAAATATTA-A-------TTTTTTTTCCAAAAATATTCA i otoGar3.GL873530 I 121 C 0 s canFam3.chr30 26791583 135 - 40214260 TATATCTAACA-CTTGCGCTCAA--------------------------------GGCTATTCTAAATGTCA-------GGTGGCTA-----TTCTTTGGCTTTGGGCTATTTTTCTACAAGCAAATTTT-GCTAGAATATGTGATTCAATACAAATACTG-T-------TTTCTTCCAC--AAATGTTTA i canFam3.chr30 C 0 I 10 s dasNov3.JH579377 1057316 181 + 2868945 CATGTCTAATA-CAAATGCTCAAAAACAAAATATTAAGAATAGGGAGCAAAACTTGGCCATTCTAAATGATGTCAATCTTTCAGGTA-TCATTTTTTTGGCATTAGGCTGTATT-CGACAAGCACATTTTA--TTAAAGATGTAATTCAATACAAACATTA-AAACTGTTTTTTCTAA----AAATATTTA i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I a score=37247.000000 s hg38.chr14_KI270725v1_random 141074 3 + 172810 CAA s panTro5.chr1 126767152 3 + 228573443 CAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379606 3 - 99763055 CAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3675 3 + 21985 CAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525984 3 + 121039945 CAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179640 3 - 169600520 CAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147857225 3 - 171882078 CAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26930322 3 + 40200012 CAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374898 3 - 7633303 CAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36171276 3 + 58131712 CAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565709 3 - 2620224 CAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8394400 3 - 10629787 CAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977394 3 - 132174527 CAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767562 3 + 21366645 CAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290081 3 + 13033340 CAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6369716 3 - 11604778 CAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36205264 3 - 36342412 CAG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1057497 3 + 2868945 GAA i dasNov3.JH579377 C 0 I 16 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e canFam3.chr30 26791718 10 - 40214260 I a score=2490173.000000 s hg38.chr14_KI270725v1_random 141077 247 + 172810 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----caaatttattattctcagttctgggggttgggaagtccaagatttaggtgccagcagagttgttacctggtga-ggtttgtttctca--------aacttactgctgcatcttcacttggcataaggacaaaaggggcaaagtagctccctatgggttcttttataaggggactaacccattcatgatggctcccc s panTro5.chr1 126767155 247 + 228573443 GCtgtttgagtcgattt-ggactgctataacaaattaccttagactgggtaatttataaac----caaatttattattctcagttctgggggttgggaagtccaagatcaaggtgccagcagagttgttacctggtga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctatgggttcttttataaggggactaacccattcatgacggctcccc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379609 247 - 99763055 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaatttattgttctcagttctgaaggttgggaagtccaagatcaaggtgccagcagagttgttatctggtaa-ggtttgtttctta--------aacttactgctgcatcttcacgtggcataagggcaaaagtggcaaagtagctccggaagggttcttttataaggggactaatccattcatgaggccttccc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3678 247 + 21985 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----caaatttattattctcagttctgggggttgggaagtccaagatctaggtgccagcagagttgttacctggtga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctatgggttcttttataaggggactaacccattcatgacggctcccc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53525987 246 + 121039945 CCtgtttgagtctatct-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaatttattgttctcagttctgggggttgggaagtccaagatcaaggtgccagcagagttgttatctggtga-ggtttgtttctca--------aacttactgctgcatcttcacgtggcataagggcaaaaggggcaaagtagctccctaagggtt-ttttatgaggggactaatgcattcatgaaggctcccc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179643 248 - 169600520 CCtgcttgagtccatttgggactgctgtaacaaattaccttagactgggtaatttataaac----agaaattattgttctccgttctgggagttgggaagtccaagatcaaggaaccagcagagttgttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagggttcttttataagggtgctaacccattcatgagggctcccc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147857228 247 - 171882078 CCtgcttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaaattattgttctccgttctgggagttgggaagtccaagatcaaggaaccagcagagttgttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagggttcttttataagggtgctaacccattcatgagggctcccc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26930325 247 + 40200012 CCtgcttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaaattattgttctccgttctgggagttgggaagtccaagatcaaggaaccagcagagttgttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagggttcttttataagggtgctaacccattcatgagggctcccc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4374901 247 - 7633303 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagacagggtaatttataaac----agaaattattgttctccgttctgggggttaggaagtccaacatcaaggaaccagcagagttgttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagggttcttttataagggtgctaacccattcatgagggctcccc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36171279 247 + 58131712 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaaattattgttctccgttctgggggttgggaagtccaagatcaaagaaccagcagagttgttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagggttcttttataagggtgctaacccattcatgagggctcccc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565712 247 - 2620224 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaaattattgttctccgttctggggattgggaagtccaagatcaaggaaccagcagagttgttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagggttcttttataagggtgctaacccattcatgagggctcccc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8394403 247 - 10629787 CCtgtttgagtccattt-ggactgctgtaacaaattaccttagactgggtaatttataaac----agaaattattgttctcagttctgggggttgggaagtccaagatcaaggagccaacagagattttatctgatga-ggtttgtttctca--------aacttactgctgcatcttcacatggcataagggcaaaaggggcaaagtagctccctaagcgttcttttataagggtgctaacccattcatgagggttcccc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977397 254 - 132174527 CCCAttttagtccattt-agactgctataacaaattacgttagactgtgtaatttataaac----agaatttattgttcacagttctgagggttgggaagtccaaaactaaggtgccagca-agttggtatctggtga-ggtttgtttctcatagatggcaccttactgctgtatcttcacatggcataagggcaaaaggggaaaactagcttcctaaggattcttttataagggcactaaattattcatgaaggctcccc i calJac3.chr10 C 0 I 4 s saiBol1.JH378136 10767565 255 + 21366645 CCCAttttagtccattt-agactgctataacaaattacctttgactgtgtaatttataaac----agaatttattgttcacagttctgagggttgggaagtccaaaattaaggtgccagcagagttggtatctggtga-ggtttgtttctcatagatggcaccttactgctgcatcttcacatggcataagggtaaaaggggcaaactagcttcctaagggttctttcataagggcactaaattattcatgaaggttcccc i saiBol1.JH378136 C 0 I 4 s cebCap1.NW_016107324v1 9290084 255 + 13033340 CCCgttttagtccattt-agactgctataacaaattaccttagactgtgtaatttataaac----agaatttattgttcacagttctgagggttgggaagtccaaaatcaaggtgccagcagagttggtatctggtga-ggtttgtttctcatagatggtaccttactgctgcatcttcacatgacataagggtaaaaggggcaaactagcttcctcagggttctttaataagggcactaaattattcatgaaggttcccc i cebCap1.NW_016107324v1 C 0 I 41 s aotNan1.NW_018501505v1 6369719 255 - 11604778 CCCAttttagtccattt-agactgctataacaaattactttagactgtgtaatttataaac----agaatttattgttcacagttctgaggattgggaagtccaaaatcaaggtgccagcagagttggtatatggtga-ggtttgtttctcatagatggcaccttactgctgcatcttcatatggcataagggcaaaaggggcaaactagcttcctaagggttcttttataagggcactaaattattcatgaaggctcccc i aotNan1.NW_018501505v1 C 0 I 46 s otoGar3.GL873530 36205267 233 - 36342412 CCTATTTTAGTC-ATAA-TCActgttataacaaaatcccttagattgtataatatataaaccagggaaatttactgctcacagttctggatgttgggca----------------ccagcagactgtgtatctgttgagggttcattcctcctagatggtatcttcttactgtgttctcacatgacagaaaggca-------caaagaggccctct---gcctcttttataaatgcaccatgcttttcatgaggactcccc i otoGar3.GL873530 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I a score=195704.000000 s hg38.chr14_KI270725v1_random 141324 28 + 172810 aaccc----ccttaacctactcacatcccaaa s panTro5.chr1 126767402 28 + 228573443 aaccc----cctaaacttactcatatcccaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379856 28 - 99763055 acccc----ccataacccactcacatcccaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3925 28 + 21985 aaccc----ccttaacctactcacatcccaaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526233 28 + 121039945 acccc----ccataacctactcacatcccaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179891 28 - 169600520 acccc----ccatgacctactcacatcccaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147857475 28 - 171882078 acccc----ccatgacctactcacatcccaaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26930572 28 + 40200012 acccc----ccatgacctactcacatcccaaa i macNem1.NW_012010577v1 C 0 M 375 s cerAty1.NW_012000887v1 4375148 28 - 7633303 acccc----ccatgacctactcacatcccaaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36171526 28 + 58131712 acccc----ccatgacctactcacatcccaaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565959 28 - 2620224 acccc----ccatgacctactcacatcccaaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8394650 28 - 10629787 acccc----ccatgacctactcacatcccaaa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977655 32 - 132174527 actcccgtgccatgacctacttatatccaaaa i calJac3.chr10 I 4 C 0 s saiBol1.JH378136 10767824 32 + 21366645 gctcctgtgccatgacctacttatatccaaaa i saiBol1.JH378136 I 4 C 0 s otoGar3.GL873530 36205500 25 - 36342412 ---ac----tctttacctagtaacatagcaaa i otoGar3.GL873530 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e aotNan1.NW_018501505v1 6369974 46 - 11604778 I e cebCap1.NW_016107324v1 9290339 41 + 13033340 I a score=21859.000000 s hg38.chr14_KI270725v1_random 141352 3 + 172810 gac s panTro5.chr1 126767430 3 + 228573443 gac i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379884 3 - 99763055 gac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3953 3 + 21985 gac i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526261 3 + 121039945 gac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179919 3 - 169600520 gac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147857503 3 - 171882078 gac i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 4375176 3 - 7633303 gac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36171554 3 + 58131712 gac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2565987 3 - 2620224 gac i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8394678 3 - 10629787 gac i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977687 3 - 132174527 ggc i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10767856 3 + 21366645 ggc i saiBol1.JH378136 C 0 I 2 s otoGar3.GL873530 36205525 3 - 36342412 gat i otoGar3.GL873530 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e aotNan1.NW_018501505v1 6369974 46 - 11604778 I e cebCap1.NW_016107324v1 9290339 41 + 13033340 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M a score=10500.000000 s hg38.chr14_KI270725v1_random 141355 1 + 172810 c s panTro5.chr1 126767433 1 + 228573443 c i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379887 1 - 99763055 c i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3956 1 + 21985 c i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526264 1 + 121039945 c i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146179922 1 - 169600520 c i rheMac8.chr7 C 0 I 379 s macFas5.chr7 147857506 1 - 171882078 c i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 4375179 1 - 7633303 c i cerAty1.NW_012000887v1 C 0 I 326 s chlSab2.chr26 36171557 1 + 58131712 c i chlSab2.chr26 C 0 I 192 s manLeu1.NW_012108674v1 2565990 1 - 2620224 c i manLeu1.NW_012108674v1 C 0 I 360 s colAng1.NW_012121598v1 8394681 1 - 10629787 c i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977692 1 - 132174527 c i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10767861 1 + 21366645 c i saiBol1.JH378136 I 2 C 0 s cebCap1.NW_016107324v1 9290380 1 + 13033340 c i cebCap1.NW_016107324v1 I 41 C 0 s otoGar3.GL873530 36205528 1 - 36342412 c i otoGar3.GL873530 C 0 I 130 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e aotNan1.NW_018501505v1 6369974 46 - 11604778 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M a score=7112.000000 s hg38.chr14_KI270725v1_random 141356 3 + 172810 gcc s panTro5.chr1 126767434 3 + 228573443 tcc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379888 3 - 99763055 tcc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3957 3 + 21985 gcc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526265 3 + 121039945 tcc i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147857507 3 - 171882078 tcc i macFas5.chr7 C 0 I 363 s colAng1.NW_012121598v1 8394682 3 - 10629787 tcc i colAng1.NW_012121598v1 C 0 I 76 s calJac3.chr10 107977693 3 - 132174527 acc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767862 3 + 21366645 acc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290381 3 + 13033340 acc i cebCap1.NW_016107324v1 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e otoGar3.GL873530 36205529 130 - 36342412 I e aotNan1.NW_018501505v1 6369974 46 - 11604778 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e chlSab2.chr26 36171558 192 + 58131712 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e rheMac8.chr7 146179923 379 - 169600520 I a score=29323.000000 s hg38.chr14_KI270725v1_random 141359 25 + 172810 cttatttatttatttatttatttat s panTro5.chr1 126767437 25 + 228573443 tttatttatttatttatttatttat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379891 23 - 99763055 cctatttatttatttatttattt-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3960 24 + 21985 c-tatttatttatttatttatttat i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526268 19 + 121039945 cctatttatttatttattt------ i nomLeu3.chr6 C 0 C 0 s calJac3.chr10 107977696 16 - 132174527 ----tttatttatttattta----- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767865 20 + 21366645 ----tttatttatttatttattta- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290384 16 + 13033340 ----tttatttatttattta----- i cebCap1.NW_016107324v1 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e otoGar3.GL873530 36205529 130 - 36342412 I e aotNan1.NW_018501505v1 6369974 46 - 11604778 I e colAng1.NW_012121598v1 8394685 76 - 10629787 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e chlSab2.chr26 36171558 192 + 58131712 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=1638.000000 s hg38.chr14_KI270725v1_random 141384 3 + 172810 tta s panTro5.chr1 126767462 3 + 228573443 tta i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 3984 3 + 21985 tta i gorGor5.CYUI01005903v1 C 0 C 0 s aotNan1.NW_018501505v1 6370020 3 - 11604778 tta i aotNan1.NW_018501505v1 I 46 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e saiBol1.JH378136 10767885 0 + 21366645 C e otoGar3.GL873530 36205529 130 - 36342412 I e cebCap1.NW_016107324v1 9290400 0 + 13033340 C e calJac3.chr10 107977712 0 - 132174527 C e colAng1.NW_012121598v1 8394685 76 - 10629787 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e chlSab2.chr26 36171558 192 + 58131712 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I e nomLeu3.chr6 53526287 0 + 121039945 C e panPan2.chr15 55379914 0 - 99763055 C a score=14605.000000 s hg38.chr14_KI270725v1_random 141387 27 + 172810 tttatttatttattttttgagatggag s panTro5.chr1 126767465 23 + 228573443 tttatttatttatt----gagatagag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379914 9 - 99763055 ------------------gagatggag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 3987 15 + 21985 tttatt------------gagatggag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526287 9 + 121039945 ------------------gagatggag i nomLeu3.chr6 C 0 C 0 s colAng1.NW_012121598v1 8394761 27 - 10629787 ttTCATTCTCTCTCTCTCCCTCTgggg i colAng1.NW_012121598v1 I 76 C 0 s calJac3.chr10 107977712 13 - 132174527 --------------ttttgagatggag i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767885 14 + 21366645 -------------tttttgagatggag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290400 14 + 13033340 -------------tttttgagatggag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370023 24 - 11604778 tttatttat---ttttttgagatggag i aotNan1.NW_018501505v1 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e otoGar3.GL873530 36205529 130 - 36342412 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e chlSab2.chr26 36171558 192 + 58131712 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=1409401.000000 s hg38.chr14_KI270725v1_random 141414 328 + 172810 tcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctctggttcccaggttcaagcaattcttctgcctcagcctcccgagtagctgggattacaggcgtgtgcca-------------------ccacacctggctaatttttgtatttttagtaaagatggggttttaccatgttggccaggctggtcttgaactcctgacctcatgatctgtccacttcggcctcccaaagtgctgggattacaggtgtgagccactgtgtccagcctggcctcacatcttaacaccaacat-attgggaattagatttcaatatatgagttttg s panTro5.chr1 126767488 328 + 228573443 tcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcgctgcaacctctgcttcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgtgcca-------------------ccacacctggctaatttttgtatttttagtagagatggggttttaccatgttggccaggctggtcttgaactcctgacttcgtgatctgtccacttcggcctcccaaagtgctgggattacaggtgtgagccactgtgtccagcctggcctcacatcttaacaccaacat-atcaggaattagacttcaatatatgaattttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55379923 328 - 99763055 tcttgctctgttgcccaggccggagcgcagtggcacaatctcagctcactacaacctctgcttcccaggctcaagcaattctcctgcctcagtctcccgaatagctgggattacaggcgtgtgcca-------------------ccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgaccttgtgatctgtccacttcggcctcccaaagttctgggattacaggtgtgagccactgtgtccagactggcctcacatcttaacaccaacat-attgggaattagatttcaatatatgaattttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4002 328 + 21985 tcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctctggttcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgtgtgcca-------------------ccacacctggctaatttttgtatttttagtaaagatggggttttaccatgttggccaggctggtcttgaactcctgacctcgtgatctgtccacttcggcctcccaaagtgctgggattacaggtgtgagccactgtgtccagcctggcctcacatcttaacaccaacat-attgggaattagatttcaatatatgaattttg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526296 328 + 121039945 tcttgctctgttgcccaggctggagtgcagcggcacaatctcagctcactacaacctctgcttccagggttcaagcaattctcctgcctcagtctcccgagtagctgggattacaggcgtgtgcca-------------------ccacgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccatgctggtcttgaactcctgaccttgtgatctgtccacttcagcctcccaaagtgctgggattacaggtgtgagccactgtgtccagcctggcctcacatcttaacaccaacat-attgggaattagatttcaatatatgaattttg i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36171750 328 + 58131712 tcttgctctgttgcccaggctgaagtgcagtggcacaatctcagctcactgcaacctctgcttcccaggttcaagcaattctcctgcttcatcttcccaagtagctgggattacaggcacatgcca-------------------ccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcttgacctcgtgatctgtccacttcagcctcccaaagtgccgggattacaggcatgagccactgtgtccagccTggcctcacatcttaacaccaacat-attgggaattagatctcaatatatgaattttg i chlSab2.chr26 I 192 C 0 s colAng1.NW_012121598v1 8394788 327 - 10629787 tcttgctctgttgcccaggctggagtgcagtggcacaacctcagctcactgcaacctttgcttcccaggttcaagcaattctcctgcttcatcttcccgagtagctgggattacaggcacaagcca-------------------ccacgcctggct-atttttgtatttttagtagagatggggtttcaccatgttggacaggctggtcttgaactcttgacctcgtgatctgtccacttcagcctcccaaactgctgggattacaggcatgagccactgtgtccagcctggcctcacatcttaacaccaacat-attgggaattagatttcaatacacgaattttg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107977725 326 - 132174527 tcttgctatgtcacccaggctggagtgtagtggcatgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagccttccaagtagcttggattacaggagtgtgcca-------------------caacacctggctaatgtttgtatttttaatagagatggca-ttctccatgttggccaggctggtctagaactcctgaccatgtgatccaaccatgtcagactcccaaagtgctgggattacaggtgggagccaccgtggtcagcctggcctcacctcttaacaccaatat-attgggaattccatttcaatatatgaa-ctta i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10767899 346 + 21366645 tcttgctatgtcgcccaggctagagagcagtggcatgatctcggctcactgcaacctctgactcctgggttcaagcagttctcctgcctcagccttccaagtagctggaattataggagtgtgctaatttttgtcctaaaattagccacaagtggctaatttttgtatttttaatagagatggcatttcaccatgttggccaggctggtctagaactcctaaccatttgatccatccatgtcagcctcccaaagtgctgggattatgggtgtgagccactgcactcagcctggcctcacctcttaacaccaacat-attgggaattccgtttcaatatatgaa-ctta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290414 347 + 13033340 tcttgctatgttgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagccttccaagtagctgggattacaggagtgtgctaatttttgtgctaaaattagccatgcctggctaatttttgcatttttaatagagatggcatttcaccatgttggccaggctggtctagaactcctgaccatgtgatccatccatgtcagcctcccaaagcgctgggattacaggtgtgagccaccatgctcagcctggcctcacctcttaacaccaacataattgggaattccatttcaatatatgaa-ctta i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370047 327 - 11604778 tcttgctatgtcgcccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcttgcctcagccttccaagtagctgggattataggagtgtgcca-------------------ctacacctggctaagttttgtatttttaatagagatggcatttcaccatgttgaccaggctggtctagaactcctgaccatgtgatccatccatgtcagcctcccaaagtgctgggattacaggtgtgagccaccatgctcagcctggcctcacctcttaacaccaacat-attgggaattccatttcaatatatgaa-ctta i aotNan1.NW_018501505v1 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e otoGar3.GL873530 36205529 130 - 36342412 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=78879.000000 s hg38.chr14_KI270725v1_random 141742 21 + 172810 gagagatataaactttaggcc s panTro5.chr1 126767816 21 + 228573443 gagagatataaactttcagct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380251 21 - 99763055 gagagatataaactttcagcc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4330 20 + 21985 gagagatataaacttt-agcc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526624 21 + 121039945 gagagatataagctttcagcc i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172078 21 + 58131712 gagagatgtaaagtttcagcc i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395115 21 - 10629787 gagagatgtaaagtttcagcc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978051 21 - 132174527 gagagctataaacagtgagcc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768245 21 + 21366645 gagagctataaacattgagcc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290761 21 + 13033340 gagagctataatcattgagcc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370374 21 - 11604778 gagagctataaacattgagcc i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36205659 21 - 36342412 GAAGGACACCAACATTTGGCC i otoGar3.GL873530 I 130 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58105103 1648 - 182113224 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=61593.000000 s hg38.chr14_KI270725v1_random 141763 13 + 172810 cacagca------CAAACC s panTro5.chr1 126767837 13 + 228573443 cacagca------CAAACC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380272 13 - 99763055 catagca------CAAACC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4350 13 + 21985 cacagca------CAAACC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526645 13 + 121039945 catagca------CAAACC i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172099 13 + 58131712 catagca------CAAATC i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395136 13 - 10629787 catagca------CAAATC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978072 13 - 132174527 cctagca------CAAATC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768266 13 + 21366645 cctagca------CAAATC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290782 13 + 13033340 cctagca------CAAATC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370395 13 - 11604778 cctagca------CAAATC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36205680 19 - 36342412 AATAGCATAATTTCAACCA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58106751 13 - 182113224 CACGGCA------TAAACC i mm10.chr2 I 1648 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e dasNov3.JH579377 1057500 16 + 2868945 I e canFam3.chr30 26791718 10 - 40214260 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=118456.000000 s hg38.chr14_KI270725v1_random 141776 26 + 172810 AAGGATGAATGTATGAGGCACCTGTC s panTro5.chr1 126767850 26 + 228573443 AAGGATGAATGTTTGAAGCCTCTGAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380285 26 - 99763055 AAGGATGAATGTTTGAGGCACCTGTC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4363 26 + 21985 AAGGATGAATGTTTGAGGCACCTGTC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526658 26 + 121039945 AAGGATGAATGTTTGAGGCACCTATC i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172112 26 + 58131712 AAGGTTTAATGTTTGAGGCACCTGCC i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395149 26 - 10629787 AAGGTTTAACGTTTGAGGCACCTGCC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978085 26 - 132174527 AAGTTTGAATTTTTGAAGCACTTGTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768279 26 + 21366645 GAGTTTGAATTTTTGAGGCACCTGTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290795 26 + 13033340 AAGTTTGAATTTTTGAGGCACCTGTC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370408 26 - 11604778 AAGTTTGAATTTTTGAGGCACCTGTC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36205699 26 - 36342412 AAAGTTGAAAGATTGGGGTCCCTATC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58106764 26 - 182113224 AAAGGTCAAAAACTGAGTTACCCATC i mm10.chr2 C 0 C 0 s canFam3.chr30 26791728 25 - 40214260 AAGGTTGAAAG-TCGAGATACATATC i canFam3.chr30 I 10 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e dasNov3.JH579377 1057500 16 + 2868945 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=1627353.000000 s hg38.chr14_KI270725v1_random 141802 273 + 172810 AAA-ATACACATTTGAAAAGATCAGAACGTCTGCAATGC-CAAATGAATTACATTTGTAGAGGTAAATTCTAACAATGAAATGAGAAGAACTGCAAACAGAAGGAATCACAGAGAGAACCATTTAATTTTAACATTGAGG-AAAAACTTTGAATGTGGGTTCCATCCAATTGTACAATAACTCAATGT---------------------ACACAGC----------------------------ATCAACA--------------CTTTTAAA----ACATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT-----------------------------------GATGTAATGCTAGAAGAAGAA------TTCATACT s panTro5.chr1 126767876 272 + 228573443 AAA-ATAAACATTTGAAAATATCAGAACGTCTGCAATGC-CAAATTAATTACATTAGTAGAGGCAAATTCTAACAATGAAATGAGA-GAACTGCAAACAGAAAGAATCACAGAGAGAACCGTTTAATTTTAACATTGAGG-AAAAACTTTGAATGTGGGTTCCATTCAATTGAACAATAACTAAATGA---------------------ATGCAGC----------------------------ATCAACA--------------CTTTTAAA----ATATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT-----------------------------------GATGTAATGCTAGAAGAAGAA------TTCATACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380311 274 - 99763055 AAA-ATACACATTTGAAAAGAGCAGAACGTCTGGAATGC-CAAATGAATTACATTAGTAGAGGCAAATTCTAACAATGAAATGAAAAGAACTGCAAACAGAAAGAATCACAGAGAGAACCATTTAATTTTAACATTGAGG-AAAAACTTTGAATGTGGGTTCCATTCAGTTGTACAATAACTCAATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----ACATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT----------------------------------GGATGTAATGCTAGAAGAAGAA------TTCATACT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4389 271 + 21985 AAA-ATACACATTTGAAAAGATCAGAACGTCTGCAATGC-CAAATGAATTACATT-GTAGAGGCAAATTCTAACAATGAAATGAGAAGAACTGCAAACAGAA-GAATCACAGAGAGAACCATTTAATTTTAACATTGAGG-AAAAACTTTGAATGTGGGTTCCATTCAATTGTACAATAACTCAATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----ACATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT-----------------------------------GATGTAATGCTAGAAGAAGAA------TTCATACT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526684 274 + 121039945 AAA-ATACACATTTGAAAAGAGCAGAATGTCTGGAATGC-CAAATGAATTACATTAGTAGAGGCAAATTCTAACAATGAAATGAAAAGAACTGCAAACAGGAAGAATCACAGAGAGAACCATTTAATTTTAACATTGAGG-AAAAACTTTGAATGTGGGTTCCATTCAATTGTACAATAACTCAATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----ACATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT----------------------------------GGATGTAATGCTAGAAGAAGAA------TTCATACT i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172138 274 + 58131712 AAA-ATACACATTTGAAAAGAGTAGAATGCCTGGAATGC-CAAATGAATTACATTAGTAGAGGCAAATTCTAACAATGAAATGAAAAGAACTGCAAACAGAAAGAATCACAGAGACAACCATTTAATTTTAACATTGAGG-AAAAACTTTGAATGTGGGTTCCATTCAGTTGTGCAATAACTCAGTGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----ACATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT----------------------------------GTATGTAATGCTAGGAGAAGAA------TTCATACT i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395175 274 - 10629787 AAA-ATACACATTTGAAAAGAGCAGAACGCCTGGAATGC-CAAATGAATTACATTAGTAGAGGCAAATTCTAACAATGAAATGAAAAGAACTGCAAACAGAAAGAATCACAGAGACAACCATTTAGTTTTAACACTGAGG-AAAAACTTTGAATGTGGGTTCCATTCAGTTGTGCAATAACTCAATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----ACATTGAGATAAA-ATATTTTTGGA-------TTTTATCAAATTT----------------------------------GGATGTAATGCTAGGAGAAGAA------TTCATACT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978111 274 - 132174527 AAA-ATATACATTTGAAAAGAGCAGAATGTCTGGAATGC-CAAATGAATTACATTAGCAGAGGCAAATACTAACAATGAAATGAAAACAAATGCGAAAGAAAAAAATCACAGAGAGAAACACTTAATTTTAACATTGAGG-AAAATCTTTGAATGTGGGTTCCATTCAATTGTACAATAGCTCGATGT---------------------ATATAGC----------------------------ATCAACA--------------CTTTTAAA----ATATTGAGATAAA-ATATTTTTGAA-------TATTATCAAATTA----------------------------------GGATGTAATGCTAGGAGAAGAA------TTCATACT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768305 272 + 21366645 AAA-ATATATATTTGAAAAGAGCAGAATGTCTGGAATGC-CAAATAAATTACATTAGCAGAGGCAAATACTAACAATGAAATGAAAAGAAATGC--AAAGAAAAAATTACAGAGAGAACAATTTAATTTTAACATTGAGG-AAAATCTTTGAATGTGGGTTCCATTCAATTGTACAATAGCTCGATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----AAATTGAGATAAA-ATATTTTTGAA-------TTTCATCAAATTA----------------------------------GGATGTAATGCTAGGAGAAGAA------TTCATACT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9290821 272 + 13033340 AAA-ATATACATTTGAAAAGAGCAGAATGTCTGGAATGC-CAAATAAATTACATTAGCGGAGGCAAATACTAACaatgaaatgaaaagaaatgc-aaaagaaaaAATTACAGAGAGAACCATTTAATTTAAATATTGAGG-AAAATCTTTGAATGTGGGTTCCATTCAATTGCACAATAGCTCGATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----AAA-TGAGATAAA-ATATTTTTGAA-------TTTTATCAAATTA----------------------------------GGATGTAATGCTAGGAGAAGAA------TTCATACT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370434 273 - 11604778 AAA-ATATACATTTGAGAAGAGCAGAATGTCTGGAATGC-CAAATAAATTACATTAGCAGAGGCAAATACTAACaatgaaatgaaaagaaatgc-aaaagaaaAAATTACGGAGAGAATCACTTAATTTTAACATTGAGG-AAAATCTTTGAATGTGGGTTCCATTCAATTGTACAATAGCTCGATGT---------------------ATACAGC----------------------------ATCAACA--------------CTTTTAAA----AAATTGGGATAAA-ATATTTTTGAA-------TTTTATCAAATTA----------------------------------GGATGTAATGCTAGGAAAAGAA------TTCATACT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36205725 285 - 36342412 ATA-ATACATATTTGAAAAGAGCAGACAGCCTGGAATGC-TAAATGGATTCCATTAACAGAGGCCAATTCTAACAACAGAATGAAAGGAAATACAAACAGAGAGAACCTCTGAGAGAATCATTTACCTTAAATGTTGAGG-AGGAACAGTGAATGTAGGTTCTATTCAGTCATACAACAGTTCATTAA---------------------ATACCAC----------------------------ATCAAAAATGGTTTTTTTTTTTTTTTA--------ACTGAGATGAA-ATCTTTTTGGA-------TTTTATCAAATTTT---------------------------------GGACGTCATGTTAGGAGAAGGA------TTAATATT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58106790 245 - 182113224 AAA---ACATGTTTGA-----------TGCAAGAAACTC-CG---GTATTACACTAGCAGAGA-AAATTCTAACAAC-AAATGAAAAGGAATAAAAGCTGATG-------AGAGAGAAATATCTAATCTCAGCATTGAGG-AAAAGCTTC-AGGATGCGTTCTGCTCAATTGCAAAATAGTTCAGTAA---------------------ATATATT--------------------------------GCA--------------TTTTTTTC----CAAATGAGATTAACATCATATTGGA-------TTTTATAAGATTT----------------------------------GGATGTGATACCAAGACAAAGA------TTAATACC i mm10.chr2 C 0 C 0 s canFam3.chr30 26791753 368 - 40214260 AAAAATACACATTTGAAAAGAGCAGAGAATCTAGAATGCTTAAATGGATTACATTAGTAGAGGCAAATTCAAATAGCTAAATGGAAAAGAATGTAAACACAGAGAATC--AGAGAGGAACATTTAATTTTAGCACTGATG-AAAAACTG-AAACATGGGTTCT-TTCAGTTGTGCAATAGTACAAACTTTTATTTTTTTTCCAGTCGTGATACAATCACTTTCATTTGATGTAATGCCAGAAGGATTAATA--------------TTTTGGAG----AAATTGTAATAAA-ATATTTATCGGGTTCtttttttttaagattttacttacttattcacgatagacatagagagaggcagagatacagacagagggagaaacagactccatgcc i canFam3.chr30 C 0 I 93 s dasNov3.JH579377 1057516 267 + 2868945 AAA-AAGCCTGTTTGAAAAGAACAGAAAGCTTGG-ATGC-TGAGTGGACTATTTTAGTAGAGTCAAATTCTAGCAACAAAAATAAAAAGAATGAAAACACAGAGAATCACAAAGAGGAACATTTAATCTTACCATTGAGGCAAAAGTTTTGAATGTGAGCTCTATTCAGTTGTACAATAGTTCAATAA---------------------ATGAAGC----------------------------AACAGAA--------------CTATTTTATTTTCAATTGAGATAAA-ATCTCTTTCAT-------TT---------------------------------------------GGATATAATGCCAGGAGAAAGA------TTACTATT i dasNov3.JH579377 I 16 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=98903.000000 s hg38.chr14_KI270725v1_random 142075 26 + 172810 -TCGAAGGGGCTGTGATAAATTAAAGG s panTro5.chr1 126768148 26 + 228573443 -TTGAAGGGACTGTGACAAATTAAAGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380585 26 - 99763055 -TTGAAGGGACTGTGATAAATTAAAGG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4660 26 + 21985 -TTGAAGGGACTGTGATAAATTAAAGG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526958 26 + 121039945 -TTGAAGGGACTGTGATAAATTAAAGG i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172412 26 + 58131712 -TTGAAGGGACTGTCATAAATTAAAGT i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395449 26 - 10629787 -TTGAAGGGACTGTGATAAATTAAAGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978385 21 - 132174527 -TTGAAGAGACTGTCA-----TAAATG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768577 21 + 21366645 -TTGAAGAGACTGTCA-----TAAAGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291093 21 + 13033340 -TTGAAGAGACTGTCA-----TAAAGG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370707 21 - 11604778 -TTGAAGAGACTGTCA-----TAAAGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206010 22 - 36342412 -TTGGGGGAATTGTTGA----CAAATA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107035 26 - 182113224 -CAGAAAGGCTTGTGTTAAATTAAAGG i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1057783 27 + 2868945 TTAGGAGGGTTTGCAATAAATTTAAAC i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e canFam3.chr30 26792121 93 - 40214260 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=460323.000000 s hg38.chr14_KI270725v1_random 142101 67 + 172810 ATTTATTTAGTTCTGTTTGCACTTGCTACATGCTGTTTCCAATACGAATATTTTCACAAGATTTACA s panTro5.chr1 126768174 67 + 228573443 ATTTATTTAGTTCTGTTTGCACTTGCTACATGCTGTTTCCAATATGAATATTTTCACAAGATTTACA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380611 67 - 99763055 ATTTATTTCCTTCTGTTTGCATTTGCTATATGCTGTTTCCAGTATGAATATTTTCACAAGATTTACA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4686 67 + 21985 ATTTATTTAGTTCTGTTTGCACTTGCTACATGCTGTTTCCAATATGAATATTTTCACAAGATTTACA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53526984 67 + 121039945 ATTTATTTAGTTCTGTTTGCACTTGCTACATGCTGTTTCCAGTATGAATATTTTCACAAGATTTACA i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172438 67 + 58131712 ATTTATTTAGTTCTGTTTGCACTTGCTATATGCTGTTTCCAATGTGAATATTTTCACAAGATTTACC i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395475 67 - 10629787 ATTTATTTAGTTCTGTTTGCACTTGCTATATGCTGTTTCCAATGTGAATATTTTCACAAGATTTACA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978406 67 - 132174527 ATTTACTTGGTCCTGTTTGCACTTGCTACATGCTGTTTTCAATATGAATATTTTCACAAGATTTACA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768598 67 + 21366645 ATTTACTTGGTCCTGTTTGCACTTGCCACATGCTGTTTTCAATATGAATATTTTCACAAGATTTACA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291114 67 + 13033340 ATTTACTTGGTCCTGTTTGCACTTGCCACATGCTGTTTTCAATATGAATATTTTCACAAGATTTACA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370728 67 - 11604778 ATTTACTTGGTACTGTTTGCACTTGCCACATGCTGTTTTCAATATGAATATTTTCACAAGATTTACA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206032 67 - 36342412 ATGTATTGGGTTCTGTTTGCACCTTTCCTACATTATTTTCAATATGAATGTTTTGGAAAGATTGACA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107061 67 - 182113224 ATTTGTTATGTTCTCTTTATGTGCGACATACCCTGTTTCCAATATTAATATTTTGGCAAGATGAACG i mm10.chr2 C 0 C 0 s canFam3.chr30 26792214 67 - 40214260 GTTTATCGGGTTCTATCTGCACTTGATGTGCACTGTTTTCAATACATATATTTTGACAAGATTCACA i canFam3.chr30 I 93 C 0 s dasNov3.JH579377 1057810 67 + 2868945 ATTTATTGGGTTCTGTTCTCACTTGCTGTACAGTGTTTTCAATGGGTTTGTTTTGGCAAGAGATAGA i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=94027.000000 s hg38.chr14_KI270725v1_random 142168 16 + 172810 TGTCTAATACATGA--GT s panTro5.chr1 126768241 16 + 228573443 TGTCTAATACATGA--GT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380678 16 - 99763055 TGTCTAATACATGA--GT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4753 16 + 21985 TGTCTAATACATGA--GT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527051 16 + 121039945 TGTCTAATACATGA--GT i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172505 16 + 58131712 TGTCTAATACATGA--GC i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395542 16 - 10629787 TGTCTAATACATGA--GC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978473 16 - 132174527 TGCTTAATACATGA--GT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768665 16 + 21366645 TGCCTAATACATGA--GT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291181 16 + 13033340 TGCCTAATACATGA--GT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370795 16 - 11604778 TGCCTAATACATGA--GT i aotNan1.NW_018501505v1 C 0 C 0 s eulMac1.LGHX01000819v1 843819 13 - 1078805 TGTA-AATATAAGG---- i eulMac1.LGHX01000819v1 N 0 I 5413 s eulFla1.LGHW01000825v1 852088 13 - 1089701 TGTA-AATATAAGG---- i eulFla1.LGHW01000825v1 N 0 I 5413 s otoGar3.GL873530 36206099 16 - 36342412 TGTCTAATACAAGATG-- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107128 16 - 182113224 TGTCTTATATAAGC--CT i mm10.chr2 C 0 C 0 s canFam3.chr30 26792281 16 - 40214260 TGTTTAATACAAGA--CT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1057877 16 + 2868945 TGTCTAATATAAGG--TT i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=1093489.000000 s hg38.chr14_KI270725v1_random 142184 186 + 172810 TGGCTCCTGACCTTGAAGCAATTGTTAGCAATAGATACACTGGTAAAAAAAA-TTATCTTCTGCTGTCCTGCATGACCATGGACATGGACATCTTAGTATTTATGCATAATAA------------------AAACTT-----------TCAGTTCAGCTTAGTAAATATTTATTGACAATGTGCTAATCATGAG--GAGGACTGTGGATAAAGGTGGA s panTro5.chr1 126768257 187 + 228573443 TGGCTCCTGACCTTGAAGCAATCGTTAGCAATAGATACACTGGTAAAAAAAAATTATCTTCTGCTGTCCTACATGACCATGGACATGGACATCTTAGTATTTATGCATAATAA------------------AAACTT-----------TCAGTTCAGCTTAGTAAATATTTATTGACAATATGCTAATCATGGG--GAGGAATATGGATAAAGGTGGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380694 186 - 99763055 TGGCTCCTGACCTTGAAGCAATTGCTAGCAATAGATACACTGGTAAAAAAAA-TTATCTTCTGCTGTCCTGCATGACCATGGACATGGACATCTTAGTATCTATGCATAATGA------------------AAACTT-----------TCGGTTCAGCTTAATAAATATTTATTGACAATGTGCTAATCATGAG--GAGAACTGTGGATAAAGGTGGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4769 186 + 21985 TGGCTCCTGACCTTGAAGCAATTGTTAGCAATAGATACACTGGTAAAAAAAA-TTATCTTCTGCTGTCCTGCATGACCATGGACATGGACATCTTAGTATTTATGCATAATAA------------------AAACTT-----------TCAGTTCAGCTTAGTAAATATTTATTGACAATGTGCTAATCATGAG--GAGGACTGTGGATAAAGGTGGA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527067 185 + 121039945 TGGGTCCTGACCTTGAAGCAATTGTTAGCAATAGATACACTGGTAAAAAAA--TTATCTTCTGCTGTCCTGCAAGACCATGGACATGGACATCTTAGTATTTATGCATAATAA------------------AAACTT-----------GCGGTTCAGCTTAATAAGTATTTATTGACAATGTGCTAATCATGAG--GAGAACTGTGGATAAAGGTGGA i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36172521 184 + 58131712 TTACTCCTGACCTTGAAGCAATTGTTAGCAATAGATACAATGGTAAAAAA---TTACCTTCTGCTGTCCTGCATAACCATGGACATGGACATCTTAGTATTTATGCATAATAA------------------AAACTT-----------TCAGTTCAGCTTAATAAGTATTTATTGACAACGTGCTAATCATGAG--GAGGACTGGGGATAAAGGTGGA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395558 184 - 10629787 TGGCGCCTGACCTTGAAACAATTGTTAGCAATACATACACTGGTAAAAAA---TTACCTTCTGCTGTCCTGCATGACCATGGACATGGACATCATAGTATTTATGCATAATAA------------------AAACTT-----------TCAGTTCAGTTTAATAAGTATTTATTGACAACGTGCTAATCATGAG--GAGGACTGTGGATAAAGGTGAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978489 185 - 132174527 TGGCTCTTAACCTTGCAGCAATTGTTACCAATAGATACACTGGTAAAAAAA--TTATCTTCTGCTGTCCTGCATGAGCATGGACATGAACATCTTAGTATTTATGCATAATAA------------------AAACTT-----------TCAGTTCCACTTAATAAATATTTATTGACAATGTGCTAATCATAAG--GAGGACTGTGGATAAAGGTGGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768681 181 + 21366645 TGGCTCCTAACCTTGCAGCGATTGTTACCAATAGATACACTGGTCAAAAAA--GTATCTTCTACTGTCCTGCATGAGCATGGACATGGACATCTTAGTATTAATGCATAATAA------------------AAACTT-----------TCAGTTCCACTT----AATATTTATTGACAATGTGCTAATCATAAG--GAAGACTGTGGATAAAGGTGGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291197 185 + 13033340 TGGCTCCTAACCTTGCAGCAATTGTTACCAATAGATACACTGGTCAAAAAA--TTATCTTCTGCTGTCCTGCATGAGCATGGACATGGACATCTTAGTATTAATGCATAATAA------------------AAACTT-----------TCATTTCCACTTAATAAATATTTATTGACAATGTGCTAATCATAAG--GAGGACTGTGGATAAAGGTGGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370811 185 - 11604778 TGGCTTCTAACCTTGCAGCAATTGTTACCAATAGATACACTGGTCAAAAAA--TTATCTTCTGCTGTCCTGCATGAGCATAGACATGGACATCTTAGTATTTATACATAATAA------------------AAAGTT-----------TCAGTTCCACTTAATAAACATTTATTGACAATGTGCTAATCATAAG--GAGGCCTGTGGATAAAGGTGGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206115 178 - 36342412 TGGCCCCTGACCTTGCCACAATTGCTACCAGTAGATAAATTAGTCAAAAAA--CCATCTTCTGCTATGCTAGGGGAGCCTGAGCATG-------TGGTGGTTATGCGGAATAA------------------AGAAGT-----------TCTGCTCAGCTTAATAAATATTTATTGATAATATGATAATCATGGG--GAGGAGTGAGGATGAGAGTGGA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107144 178 - 182113224 TGGCTCCAAATTTTGATTCAATTGTTACTAATATAATCATTGGTAGAAAA---AAATCAGCTGCTGTCTGAAATGAGGGCAGGC-------TCATAGAGTTTGTATGAAGAAC------------------AGGCTT-----------TAAACTGAGCTTAATGAGAA-TTATTAACAATGCTTTGATCTTTGGTAAAGGATTGCTGTTCAGCACAAA i mm10.chr2 C 0 C 0 s canFam3.chr30 26792297 190 - 40214260 TGGCTGCTGACGTTACAGCAGTTTTTACCAGCATATACACTGGAAGAATACAATTATCTTCTGTTGTCTGGGGTGAGCATGGACATG-------TGGTGTTTATGCAAATTAA------------------GGAATTGGAGGCATTTATATGTTTAGTTTAGTGAACACTTATTGACAATGTGCTAATCTTGGC--CAGGAGTGAAGAT-AGTTTGGA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1057893 191 + 2868945 TGGCTCCTGACCTTAGAACAATTGTTCTCATCATATAATCTGGCAGAAAATA-ATATCTTCTGCTGTCCTAGCTGGGCGGGGACATG-------TGATGATTATGCAATATACAAGGTATTTGGGGTATTTAAAATT-----------TCTGTTCAATTTAATGAACATTTATTGACAATGTG------GAGGA--GAGGAGTAAGGGGAAGTGTGGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e macFas5.chr7 147857510 363 - 171882078 I e rheMac8.chr7 146179923 379 - 169600520 I a score=83085.000000 s hg38.chr14_KI270725v1_random 142370 13 + 172810 TGATAAAGATAAA s panTro5.chr1 126768444 13 + 228573443 TGATAAAGATAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380880 13 - 99763055 TGATAAAGATAGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4955 13 + 21985 TGATAAAGATAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527252 13 + 121039945 TGATAAAGATAGA i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147857873 13 - 171882078 tagtacagatagg i macFas5.chr7 I 363 C 0 s chlSab2.chr26 36172705 13 + 58131712 TGATAAAGATAGA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8395742 13 - 10629787 TGATAAAGATAGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978674 13 - 132174527 TGATAAAGATAGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768862 12 + 21366645 TGAT-AAGATAGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291382 13 + 13033340 TGATAAAGATAGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6370996 13 - 11604778 TAATAAAGATAGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206293 13 - 36342412 TAACAGAGATAGA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107322 13 - 182113224 GAGCAGGGATAAC i mm10.chr2 C 0 C 0 s canFam3.chr30 26792487 13 - 40214260 GGCGAGAGAGAGA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058084 13 + 2868945 GGATTGAGATAGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e manLeu1.NW_012108674v1 2565991 360 - 2620224 I e cerAty1.NW_012000887v1 4375180 326 - 7633303 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M e rheMac8.chr7 146179923 379 - 169600520 I a score=104086.000000 s hg38.chr14_KI270725v1_random 142383 8 + 172810 TTTAAGTT s panTro5.chr1 126768457 8 + 228573443 TTTAAGTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380893 8 - 99763055 TTTAAGTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4968 8 + 21985 TTTAAGTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527265 8 + 121039945 TTTAAGTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146180302 8 - 169600520 TTTAAGTT i rheMac8.chr7 I 379 C 0 s macFas5.chr7 147857886 8 - 171882078 tttcaGTT i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 4375506 8 - 7633303 TTTAAGTT i cerAty1.NW_012000887v1 I 326 C 0 s chlSab2.chr26 36172718 8 + 58131712 TTTAAGTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566351 8 - 2620224 tttAAGTT i manLeu1.NW_012108674v1 I 360 C 0 s colAng1.NW_012121598v1 8395755 8 - 10629787 TTTAAGCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978687 8 - 132174527 TTTAAGTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768874 8 + 21366645 TTTAAGTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291395 8 + 13033340 TTTAAGTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6371009 8 - 11604778 TTTAAGTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206306 8 - 36342412 TTTAAGTT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107335 7 - 182113224 -TTACTCT i mm10.chr2 C 0 I 1 s canFam3.chr30 26792500 8 - 40214260 TTTAAGTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058097 8 + 2868945 TTCAAGTC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e macNem1.NW_012010577v1 26930600 375 + 40200012 M a score=370734.000000 s hg38.chr14_KI270725v1_random 142391 33 + 172810 GGGAAAACTACCACCACTACATCTACAAGGGCT s panTro5.chr1 126768465 33 + 228573443 GGCAAAACTACCACCACTACATCTACAAGAGCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380901 33 - 99763055 GGGAAAACTACAACCACTACATCTACAAGGGCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 4976 33 + 21985 GGGAAAACTACCACCACTACATCTACAAGGGCT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527273 33 + 121039945 GGGAAAACTACAACCACTATATCTACAAGGGCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146180310 33 - 169600520 GGGAAAGCTACAACCACTACATTGACAAGGGCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147857894 33 - 171882078 GGGAAAGCTACAACCACTACATTGACAAGGGCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26930975 33 + 40200012 GGGAAAGCTACAACCACTACATTGACAAGGGCT i macNem1.NW_012010577v1 M 375 C 0 s cerAty1.NW_012000887v1 4375514 33 - 7633303 GGGAAAGCTACAACCACTACATTGACAAGGGCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36172726 33 + 58131712 GGGAAAGCTACAACCACTACATTGACAAGGGCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566359 33 - 2620224 GGGAAAGCTACAACCACTACATTGACAAGGGCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8395763 33 - 10629787 GGGAAAGCTACAACCACTACATTGACAAGGGCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978695 30 - 132174527 GGGAAAACTACAACCACTAAATCTACAAGG--- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768882 33 + 21366645 GGGAAAACTACAACCACTAAATCTACAAGGGCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291403 33 + 13033340 GGGAAAACTACAACCACTAAATCTACAAGGGCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6371017 33 - 11604778 GGGAAAACTACAACCACTAAATCTACAAGGGCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206314 33 - 36342412 TGGAAAACTATAATTGCTAACTCACCAGGGGCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58107343 27 - 182113224 -GAGAGATTGCA-----TGGCTCTACAAGGGCT i mm10.chr2 I 1 I 815 s canFam3.chr30 26792508 31 - 40214260 TGGACGGC--CAAGTGCTAATTCTATAAGGGCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058105 32 + 2868945 TGGAAAGTCATAG-TACTAACTCCACAAGGGCT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=1506065.000000 s hg38.chr14_KI270725v1_random 142424 132 + 172810 GAAAGTATATACAAGTCAGAAGCACACAGAAATCACTGAACCACAAAGTAAATGGCCGTAAGTGCTGTTATATACCCAAAGCATGTCCTACTTATA----TAGTCCTTTAAATG----GATAAATAATAC---ATTAA------------TTCTG s panTro5.chr1 126768498 100 + 228573443 GAAAGTATATACAAGTCAGAAGCACACAGAGATCACTGAACCACAAA--------------------------------ACCATGTCCTACTTATA----TAGTCCTTTAAATG----GATAAATAATAC---ATTAA------------TTCTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55380934 132 - 99763055 GAAAGTATATACAAGTCAGAAGCACACAGAAATCACTGAACCACAAAGTAAATGGCCATAAGTGCTGTGATATACGCAAACCGTGTCCTACTTATA----TAGTCCTTTAAACG----GATAAATAGTAC---ATTAA------------TTCTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 5009 132 + 21985 GAAAGTATATACAAGTCAGAAGCACACAGAAATCACTGAACCACAAAGTAAATGGCCGTAAGTGCTGTTATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----GATAAATAATAC---ATTAA------------TTCTG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527306 132 + 121039945 GAAAGTATATACGAGTCAGAAGCACACAGAAATCACTGAACCACAAAGTAAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTACA----TAGTCCTTTAAATG----GATAAATAATAC---ATTAA------------TTCTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146180343 132 - 169600520 GAAAGTATATACAAGTCAGAAGCGCACAGAAATCACTGAACCATGAAGTAAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----CATAAATAATAC---ATTAA------------TTCTG i rheMac8.chr7 C 0 I 3 s macFas5.chr7 147857927 132 - 171882078 GAAAGTATATACAAGTCAGAAGCGCACAGAAATCACTGAACCACGAAGTAAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----CATAAATAATAC---ATTAA------------TTCTG i macFas5.chr7 C 0 I 3 s macNem1.NW_012010577v1 26931008 132 + 40200012 GAAAGTATATACAAGTCAGAAGCGCACAGAAATCACTGAACCACGAAGTAAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----CATAAATAATAC---ATTAA------------TTCTG i macNem1.NW_012010577v1 C 0 I 3 s cerAty1.NW_012000887v1 4375547 132 - 7633303 GAAAGTATATACAAGTCAGAAGCGCACAGAAATCACTGAACCACGAAGTAAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----CATAAATAATAC---ATTAA------------TTCTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36172759 132 + 58131712 GAAAGTATATACAAGTCAGAAGTGCACAGAAATCACTGAACCACGAAGTCAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----CATAAATAATCC---ATTAA------------TTCTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566392 132 - 2620224 GAAAGTATATACAAGTCAGAAGCGCACAGAAATCACTGAACCACGAAGTAAATGGCCATAAGTGCTGTGATATACGCAAACCATGTCCTACATATA----TAGTCCTTTAAATG----CATAAATAATAC---ATTAA------------TTCTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8395796 132 - 10629787 GAAAGTATATACAAGTCAGTAGCACACAGAAATCACTGAACCACAAAGTAAATGGCCATAAGTGCTGTGATATACCCAAACCATGTCCTACTTATA----TAGTCCTTTAAATG----CATAAATAATAC---ATTAA------------TTCTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978725 118 - 132174527 --------------GTCAGAAGCATACAGAAATCACTGAACCATTAATTAAATGGCCATGAGTGCTATGACATACCCAAACCATGTCCTACTTAAA----TAGTCCTTTAAATG----GATAAATAATAC---CTTAA------------TTCTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10768915 131 + 21366645 GAAAATATATA-GAGTCAGAAGCACACAGAAATCACTGAACCACAAATTAAATGGCCATAAGTGCTATGACATACCCAAACCATGTCCTACTTAAG----TAGTCCTTTAAATG----GATAAATAATAC---CTTAA------------TTCTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9291436 132 + 13033340 GAAAATATATACGAGTCAGAAGCACACAGAAATCACTGAACTACAAATTAAATGGCCATAAGTGCTATGACATACCCAAATCATGTCCTACTTAAA----TAGTCCTTTAAATG----GATAAATAATAC---CTTAA------------TTCTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6371050 132 - 11604778 GAAAGTATATATGAGTCAGAAGCACACAGAAATCACTGAACCACAAATTAAATGGTCATAAGTGCTATGACATACCCAAACCATATTCCACTTAAA----TAGCCCTTTAAATG----GATAAATAATAC---CTTAA------------TTCTG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206347 135 - 36342412 GACAATATACACAAGTCAGAAGCACACAGAAATCACTGAAATGTTAGGTAAGAGGCCACAAGTGCTGTGATATAGTCAAACCAAGTCTTATTTTCC----TAGTATTTAAAATG----GATAAATAAAAAGAGATTAA------------TTTGG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26792539 148 - 40214260 GACAATACATACAAGTCAGGAACACATAAAAATCACTGAAATGCAGGGAAGATAGCTATAGGTGTTACAGTATACCCAAATCAATTCCTATTTATATAGTTAGTCCTTTGAATG----GATGAATTTTTT---TTAAAAAGGTAGTTAGTTTCTG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058137 130 + 2868945 ------GAGCAGAAGCCAGAAACACAGAGAAACCACTGAAATGCAAGTTGGGTGAGTGTACGAGCTGAAATATATCTAAATTAAGTCCTACTTACC----TGATCTTTAGAATGCACACATAAAAAAGAG---ATTAA------------TTCTG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I a score=1756898.000000 s hg38.chr14_KI270725v1_random 142556 233 + 172810 ACGGGGAAGGGAGAAAGTTTCTAGGAATAGTTCTTTAAAAAGTTGCATCAGTTTTGATTAATACATAGGAAG----AGACTGTTACAG-AAGAAGAGCTAGCTAACAGAAGACCTAGCATCATTTTATTCTTGCACAATATCAGGGAACCCAACAGTTTTGTCAGCAGTAGCTACTTTTAGTTTCCTTGGATA-CTTGAGATCATCTGGGAA------GA---TTGTGGTAAGTAAGGCTGCTGATGA s panTro5.chr1 126768598 233 + 228573443 ACTGGGAAGGGA-AAAGTTTCTGGGAATAGTTCTTAAAAAAGTTGCATCAGTTTTGATTAATACATAGAAAG----AGACTGTCACAG-AAGAAGAGCTAGCTAATGGGAGACCTAGCATAATTTTATTCTTGCATAATATCAGGGAACCCAACAGTTTTGTCAGCAGTAGCTACTTTTAATTTCCTTGGATAACTTGAGATCATCTGGGAA------GA---ATGTAGTAAGTAAGGCTGCTGATGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55381066 230 - 99763055 ACTGGGAAGGGAGAAAGTTTTTAGGAATAGTTCTTTAAAAAGTTGCATCAGTTTTGATTCATACATAGAAAG----AAACTGTTAC----AGAAGAGCTAGCTAACGGAAGACCTAGCATAATTTTATTCTTGCACAATATCAGGGAACCCAACAGTTTTGTCAGCAGAAGCTACTTTTAACTTCTTTGGATA-CTTGAGATCATCTGGGAA------GA---TTGTGGTCAGTAAGGCTGCTGATGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 5141 231 + 21985 ACTGGGAAGGGAGAAAGTTTCTAGGAATAGTTCTTTAAAAAGTTGCATCAGTTTTGATTAATACATAGAAAG----AGACTGTTACAG-AAGAAGAGCTAGCTAACGGAAGACCTAGCATCATTTTATTCTTGCACAATATCAGGGAACCCAACAGTTTTGTCAGCAGTAGCTACTTTTA-TTTCCTTGGATA-CTTGAGATCATCTGGGAA------GA----TGTGGTAAGTAAGGCTGCTGATGA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527438 230 + 121039945 ACTGGGAAGGGAGAAAGTTTCTAGGAATAGTTCTTTAAAAAGTTGCATCAGTTTTGATTCATACATAGAAAG----AGACTGCTAC----AGAAGAGCTAGCTAAAGGAAGACCTCACATAATTTTATTCTTGCACAATATCAGGGAACCCAACAGTTTTGTCAGCAGAAGCTACTTTTAACTTCTTTGGATA-CTTGAGATCATCTGGGAA------GA---TTGTGGTAAGTAAGGCTGCTGATGA i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4375679 231 - 7633303 ACTGGGAAGGGAGAAAGTTTCTAGGAATAG-TCTTTAAAAAGTTGCATGAGTTTTGATTCATACATAGAAAG----AGACTGTTACAG-AAGAAGAGCTAGCTAAT-GAAGACCTAGCATAATTTTATTCTTGAACAATATCAGGGAACCCAACAGCTTTGTCAGCAGAAGCTACTTTTAATTTCTTTGGATA-CTTGAGATCATCTGGGAA------GA---TGGTGGTAAGTAAGGCTGCTGGTGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36172891 229 + 58131712 ACTGGGAAGGGAGAAAGTTTCTAGGAATAGTTCTTTAAAAAGTTGCATGAGTTTTGATTCATACATAGAAAG----AGACTGTTACAG-AAGAA---CTAGCTAAT-GAAGACGCAGCATAATTTTATTCTTGAACAATATTAGGGAACCCAACAGCTTTGTCAGCAGAAGTTACTTTTAATTTCTTTGGATA-CTTGAGATCATCTGGGAA------GA---TGGTGGTAAGTAAGGCTGCTGGTGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566524 232 - 2620224 ACTGGGAAGGGAGAAAGTTTCTAGGAATAGTTCTTTAAAAAGTTGCATGAGTTTTAATTCATACATAGAAAG----AGACTGTTACAG-AAGAAGAGCTAGCTAAT-GAAGACCTAGCATAATTTTATTCTTGAACAATATCAGGGAACCCAACAGCTTTGTCAGCAGAAGCTACTTTTAATTTCTTTGGATA-CTTGAGATCATCTGGGAA------GA---TGGTGGTAAGTAAGGCTGCTGGTGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8395928 230 - 10629787 ACTGGGAAGGGAGAAAGTTTCTAGGAATAGTTCTTTAAAAAGTTACATGAGTTTTGATTCATACATAGAA------AGACTGCTACAG-AAGAAGAGCTAGCTAAT-GAAGACCTAGCATAATTTTATTCTTGAACAATATCACGGAACCCAACAGCTTTGTCAGCAGAAGCTACTTTTAATTTCTTTGGATA-CTTGAGATCATCTGGGAA------GA---TGGTGGTAAGTAAGGCTGCTGATGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107978843 228 - 132174527 ACTGAGAAGGGAGAATGTTTCTAGGAATAGTTCTCAAAAAAGTTGCATCAGTTTTGATTCATACACAG--------AGATTGTTCCAG-AAAAAGAACTAGCTAAAGAAGGACCTAGCATAATTTTCTTCTTGCACTATATCAGGGAACCCAACTGTTGTGTCAGCAG-AGCTACTTTTAATTTCTTTGGATA-CTTGAGATCCTCTGGGAA------GA---TGGTAGTAGGTAAGGCAGCTGataa i calJac3.chr10 C 0 I 1958 s saiBol1.JH378136 10769046 229 + 21366645 ACTAAGAAGGGAGAATGTTTCTAGGAATAGTTCTCGAAAAAGTTGCATCAGTTTTGATTCATACACAG--------AGATTGTTCTAG-AAAAAGAACTAGCTAAAGAAAGACCTAGCATAATTTTTTTCTTGCACAATATCAGGGAACCCAACAGTTTTGTCAGCAGAAGCTACTTTTAATTTCTTTGAATA-CTTGAGATCATCTGGGAA------GA---TGGTGGTAAGTAAGGCAGCTGatga i saiBol1.JH378136 C 0 I 1961 s cebCap1.NW_016107324v1 9291568 227 + 13033340 ACTAAGAAGGGAGAATGTTTCTAGGAATAGTTCTCGAAAAAGTAGCATCAGTTTTGATTCAT--ACAG--------AGATTGTTCCAG-AAAAAGAACTAGCTAAAGGAAGACCTAGCATAATTTTCTTCTTGCACAATATCAGGGAACCCAACAGTTTTGTCAGCAGAAGCTACTTTTAATTTCTTTGGATA-CTTGAGATCATCTGGGAG------GA---TGGTGGTAAGTAAGGCAGCTGatga i cebCap1.NW_016107324v1 C 0 I 1984 s aotNan1.NW_018501505v1 6371182 229 - 11604778 ACTGAGAAGGGAGAATGTTTCTAGGAATAGTTCTCGATAAAGTTGCATCAGTTTTGATTCATACACAG--------AGATTGTTCCAG-AAAAAGAACTAGCTAAAGGAAGACCTAGCATAATTTTCTTCTTGCACAATGTCAGGGAACCCAACAGTTTTGTCAGCAGAAGCTACTTTTAATTTATTTGGATA-CTTGAGATCATCTGGGAA------GA---TGGTGGTAAGTGAGGCAGCTGatga i aotNan1.NW_018501505v1 C 0 I 1994 s otoGar3.GL873530 36206482 238 - 36342412 TCTGAGATGGAAGAAACCATTTAAGAAGATTTTTTTGAAAAGTTGCCTCAATTTTGATGTGTATGTAGAAAGAAACAGGTTATTCCAGAAAGAAAAGATAGTTAAAGCAAGGCATAGAATAAGTTTCATCTTGCACAATATCAGGGAAGCCAACATTTTTGT---CAGAAGCTACTTGTTATTTCTTTGGATC-CTTGAGCTCATCTAGGAAGTT---GG---TTGTGGTAAGGCAGACTAATGATGA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26792687 243 - 40214260 GTTGAGATGGGAAAAATCATCTAGGAAGCTTTCTC-AGAAAATTGTATTAATTTTGATTGCTACTTCGGGAGACAAAGGTTATTCTGAAAAGATGAGATAGCTGAAGCAAGGCATAGAGTAATTTTCTTCTTACACAATCTCAGAGAATCCAATAGTTTTAGTAGCAGAAGCTACTTTTTATTTCCTTGGATC-TTTGAGGTCATCTGGGAGGGTGGCGG---TGGTGGTAAGTAAGGCTGCTAATGA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058267 239 + 2868945 ACTGCCATGGGAGAAGACTTCCAGAAAGATTTCTTGGAAAAGTTGAATCAATTTGAATT-ATATATAGGAAGAGATAGGTCTTTCCAGGAAGAAGAGCGAGCTAAAACAAAATGTAAATGAATTTTCTGCTTGCACAATGTCAGGGAACACATCCATTTTACCATCAGAAGTAATTTTTAATTCCCTT-AATC-CTTGATATCATCTGGGAA------GGTGCTGATGGTAAGTACAGCTTCTAATGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e macNem1.NW_012010577v1 26931140 3 + 40200012 I e macFas5.chr7 147858059 3 - 171882078 I e rheMac8.chr7 146180475 3 - 169600520 I a score=13333.000000 s hg38.chr14_KI270725v1_random 142789 4 + 172810 AGAC s panTro5.chr1 126768831 4 + 228573443 AGAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55381296 4 - 99763055 AGAC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 5372 4 + 21985 AGAC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527668 4 + 121039945 AGAC i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4375910 3 - 7633303 AGA- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36173120 4 + 58131712 AGAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566756 3 - 2620224 AGA- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8396158 4 - 10629787 AGAC i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36206720 4 - 36342412 AGAC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26792930 4 - 40214260 AGAC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058506 4 + 2868945 AGAT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e saiBol1.JH378136 10769275 1961 + 21366645 I e aotNan1.NW_018501505v1 6371411 1994 - 11604778 I e cebCap1.NW_016107324v1 9291795 1984 + 13033340 I e calJac3.chr10 107979071 1958 - 132174527 I e macNem1.NW_012010577v1 26931140 3 + 40200012 I e macFas5.chr7 147858059 3 - 171882078 I e rheMac8.chr7 146180475 3 - 169600520 I a score=20910.000000 s hg38.chr14_KI270725v1_random 142793 4 + 172810 TTTG- s panTro5.chr1 126768835 4 + 228573443 TTTG- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55381300 4 - 99763055 TTTG- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 5376 4 + 21985 TTTG- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527672 4 + 121039945 TTTG- i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4375913 4 - 7633303 TTTG- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36173124 4 + 58131712 TTTG- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566759 4 - 2620224 TTTG- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8396162 4 - 10629787 TTTG- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107981029 4 - 132174527 TTTA- i calJac3.chr10 I 1958 C 0 s otoGar3.GL873530 36206724 4 - 36342412 TTTG- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26792934 4 - 40214260 TTTG- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058510 4 + 2868945 -TTGT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e saiBol1.JH378136 10769275 1961 + 21366645 I e aotNan1.NW_018501505v1 6371411 1994 - 11604778 I e cebCap1.NW_016107324v1 9291795 1984 + 13033340 I e macNem1.NW_012010577v1 26931140 3 + 40200012 I e macFas5.chr7 147858059 3 - 171882078 I e rheMac8.chr7 146180475 3 - 169600520 I a score=6029.000000 s hg38.chr14_KI270725v1_random 142797 3 + 172810 ATT- s panTro5.chr1 126768839 3 + 228573443 ATT- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55381304 3 - 99763055 ATT- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 5380 3 + 21985 ATT- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527676 3 + 121039945 ATT- i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4375917 3 - 7633303 ATT- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36173128 3 + 58131712 ATT- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566763 3 - 2620224 ATT- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8396166 3 - 10629787 ATT- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107981033 3 - 132174527 AAA- i calJac3.chr10 C 0 C 0 s canFam3.chr30 26792938 3 - 40214260 GTT- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058514 3 + 2868945 -TTT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e saiBol1.JH378136 10769275 1961 + 21366645 I e otoGar3.GL873530 36206728 0 - 36342412 C e aotNan1.NW_018501505v1 6371411 1994 - 11604778 I e cebCap1.NW_016107324v1 9291795 1984 + 13033340 I e macNem1.NW_012010577v1 26931140 3 + 40200012 I e macFas5.chr7 147858059 3 - 171882078 I e rheMac8.chr7 146180475 3 - 169600520 I a score=4168414.000000 s hg38.chr14_KI270725v1_random 142800 722 + 172810 AAGAAAGGATTTATCAGGAgctgggcacagtcgctcatgcctgtaatcccagcca-tgtaggaggatgaggcaggaagactgcttaaatccaggaattagagattaacctgggcaatatagccagaccaccttctctac--aaaaa-taaaaaaacaattagatgggcattatgg-cacatgcctgtggccccagccattggggagactgaggtaaaaagatcacttgggcccaggagtttgaggctacaataggttgtgattgtgATGGCagtggctgctgccatcatgccagatgcaggggagaggtgtggccggggttgtatgctccctggatttggcaggatgaggacaagtgggagccctgccc-ttccgagttggaatgggagctccctgggtgctgctgcagctgcccaaactgcagctgtagctgtagacctggacctcccactccatggagcagatgggagtttatccaactcccctactctgtccccaccccagcccacc-acccagccacccaaaccaatgctgcagactcaggcatccctgcactcttggggagcctgggaacg----cccc-----ccttgccccttgcaggcttggaggcacctcttcctgctgcctggtctctcccacctcctggctctgtgctctgatctcagagtggggttgggacccagcagggtgctgtcactgcccagccaggtgtgcacaaattggaagcagtgccg s panTro5.chr1 126768842 721 + 228573443 AAGAAAGGATTTATCAGGAGATgggtacagtcgctcatgcctgtaatcccagcca-tgtaggaggatgaggcaggaagactgcttaagtccaggaattagagattaacctgggcaatatggccagaccaccacctctac--aaaaaataaaaaaaaaaatagatgggcattgtgg-cacatgcctgtggccccggctactggggagactgaggtaaaaagatcacttgggcccaggagtttgaggctacaataagctatgattgtgATGGCagcggctgctgccatcatgccaaaggcagggcagaggtgtggccagggttgtatactccctagagttggcaggatggggacaagtgggagccctgccccttcc---ttggaatgggagctccctgggtgcggctgcagctgcccaaactgcagctgtagctgtagacctgcaccttccactccatggagcagacaggagttcatccaactcccctactatgtccccaccccagcccact-acccagccacccaaaccaatgctgcagactcaggcatccctgcactcttggggaggctgggtgtg----cccc-----ctttgccccttgcaggcttggaggcacctcctcctgctccctggtctctcccacctcctggctcagtgctctgatctcagagtggagttgggacccagcagggtgctatcagagcccagccaggtgtgcaaacatttgaagcagtgctg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55381307 727 - 99763055 AAGAAAGGATTTATCAGGAgctgggcacagtcgctcatgcttgtaatcccagcca-tttaggaggatgaagcaggaagattgcttaaggccaggaattagagatgaacctgggcaatatagccagaccaccctctctac--aaaaa-ataaaaaacaattagatgggcattgtgg-cacatgcgtgtggccccagctactggggagactgaggtaaaaagatcacttgggctcaggaatttgaggctacagtaagctatggttgtgATGGCagcagctgctgccatcgtgtcagctgcaggggggagttgtggccggggttgtatgctccctggagttggcaggatggggacaagtgggagccctgccccttccgagttggaatgggagctccctgggtactgctgcagctgcccaaactgcagctgtagctgtagacctggacctcccactccatggagcagaccggagtttatccaactcccctacactgcccctgccccagcccacc-acccagccacccaaaccaatgctgcagactcaggcatccctgcactcttggggaggctgggaacgccaccccc-----tcttgccccttgcaggcttggaggtgcctcctcctgctgcctggtctctcccagctcctggctctgtgctctgatctcagagtggggttgggacccagcagggtgctgtcacactccagccaggtgtgcacacattgggaccagtgatg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 5383 719 + 21985 AAGAAAGGATTTATCAGGAgctgggcacagtcgctcatgcctgtaatcccagcca-tgtaggaggatgaggcaggaagactgcttaagtccaggaattagagattaacctgggcaatatagccagaccaccttctctac--aaaaa-ataaaaaacaattagatgggcattgtgg-cacatgcctgtggccccagctattggggagactgaggtaaaaagatcacttgggcccaggagtttgaggctacaataagct-tgattgtgATGGCAG-ggctgctgccatcatgccagctgcaggggagaggtgtggccggggttgtatgctccctggagttggcaggatggggacaagtgggagccctgccccttccgagttggaatgggagctccctgggtgctgctgcagctgcccaaactgcagctgtagctgtagacctggacctcccactccatggagcagacaggagtttatccaactcccctactctgtccccaccccagcccacc-acccagccacccaaaccaatgctgcagactcaggcatccctgcactcttggggag-ctgggaacg-----ccc-----ccttgccccttgcaggcttggaggcacctcctcctgctgcctggtctctcccacctcctggctctgtgctctgatctcagagtggggttgggacccagcagggtgctgtcacagcccagccaggtgtgcacacattggaagcagtgctg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53527679 723 + 121039945 AAGAAAGGATTTATCAGGAgctgggcacagtcgctcatgcctgtaatcccagcca-tttaggaggatgaggcaagaagattgcttaaggccaggaattagagatgaacctgggcaatacagccagaccaccctctctac--aaaaaacaaaaaaacaattagatgggcattgtgg-cacatgtgtgtggccccagctattggggagactgaggtaaaaagatcacttgggcccaggagtttgaggctacaataagctatgattgtgATGGCagtggctgctgccatcatgccagctgcagaggggaggtgtggccggggttgtctgctccctggagttggcaggacggggacaagtgggagctctgccccttccgagttagaatgggagctccctgggtgctgctgcagctgcccaaactgcagctgtagctgtagacctggacctcccactccatggagcagacagg-gtttatccaactcccctacactgcccctgccccagcccacc-acccagccacccaaaccaatgctgcagactcaggcatccctgcactcttggggatcctgggaacg----cccc-----ccttgctccttgcaggcttggaggtgcctcttcctgctgcctggtctctcccagctcctggctctgtgctctgatctcagagtggggttgagacccagcagggtgctgtcacagtccagccaggtgtgcatacattgggaccagtgatg i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4375920 729 - 7633303 AAGGAAGGATTTACCAGGAgctgggcatagtcgctcatgcctgtaatcccagcca-cttaggaggatgaggcaggaagattgcttaagggcaggaattagagatgaacctgggaaatatagccagaccacattctctac--aaaaaataaaaaaacaattagatgggcattgtgg-cacacgcttgtgtccccagctattggggagactgaggtaaaaagattacttaggtccaggagtttgaggctacaatgagctataattgtgATGGCagtggctgctgccatcatgccagctgcagcggggaggtgtggctggggttatatgctccctagagttggaaggatggggacaagtgggagccctgccccttctgagttggaacgggagcttactgggtgctgctgcagctgcccaaactgcagctgtagctgcagacctgggcctcccactccacggagcagacaggaatttatccaactctcctactctgcccctgccccagtccacc-acccagccacccaaaccaatgctgcagactcaggcatccttgcactcttggggagtctgggaact----ccccccacacccagccccttgcaggcttggagatgcctcctcctgctgcctggcctctcccagctcctggctctgtgctctgatgtcagagtggggttgggatccagcagggcactgtcacagtccagccaggtgtgcacacattgggagcagtgctg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36173131 728 + 58131712 AAGGAAGGATTTACCAGGAgctgggcatagtcgctcatgcctgtaatcccagcca-cttaggaggatgaggcaggatgattgcttaagggcaggaattagagatgaacctgggaaatatagccagaccacattctctacaaaaaaaaaaaaaaaaaaattagatgggcattgtgg-cacatgcttgtgtccccagctattggggagactgaggtaaaaa-attacttaggtccaggagtttgagactacaatgagctataattgtgATGGCagcggctactgccatcatgccagctgcagtggggaggtgtggccggggttatatgctccctagagttggaaggatggggacaagtgggagccctgccccttctgagttggaacgggagcttactgggtgctgctgcagctgcccaaactgcagctgtagctgtagacctgggcctcccactccacagagcagacaggaatttatccaactctcctactctgcccctgccccagtccacc-acccagccacccaaaccaatgctgcagactcaggcatccttgcactcttggggagtctgggaacc----gcccc--cacccagccccttgcaggcttggagatgcctcctcctgctgcctggcctctcccagctcctggctctgtgctctgatgtcagagtggggttgggatccagcagggtactgtcacagcccagccaggtgtgcacacattgggagcagtgctg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2566766 729 - 2620224 AAGGAAGGATTTACCAGGAgctgggcatagtcgctcatgcctgtaatcccagcca-cttaggaggatgaggcaggaagattgcttaagggcaggaattagagatgaacctgggaaatatagccagaccacattctctac--aaaaaataaaaaaacagttagatgggcattgtgg-cacacgcttgtgtccccagctattggggagactgaggtaaaaagattacttaggtccaggagtttgaggctacaatgagctataattgtgATGGCagtggctgctgccatcatgccagctgcagcggggaggtgtggctggggttatatgctccctagagttggaaggatggggacaagtgggagccctgccccttctgagttggaacgggagcttactgggtgctgctgcagctgcccaaactgcagctgtagctgtagacctgggcctcccactccacggagcagacaggaatttatccaactctcctactctgcccctgccccagtccacc-acccagccacccaaaccaatgctgcagactcaggcatccttgcactcttggggagtctgggaacc----ccccccacacccagccccttgcaagcttggagatgcctcctcctgctgcctggcctctcccagctcctggctctgtgctctgatgtcagagtggggttgggatccagcagggcactgtcacagcccagccaggtgtgcacacattgggagcagtgctg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8396169 726 - 10629787 AAGGAAGGATTTATCAGGAgctgggcatagtcgcccatgcctgtaatcccagcca-tttaggaggatgaggcaggaagattgcttaagggcaggaattagagatgaacctgggaaatatagccagactacattctctac--aaaaaataaaaaaaaaattagatgggcattgtgg-cacatgcttgtgtccccagctattggggagactgaggtaaaaagattacttaggtccaggagtttgaggctacaatgagctacgattgtgATGGCagcggctgctgccatcatgccagctgcagccgggaggtgtggctggggttatatgctccctggagttggaaggacggggacaagtgggagccctgccccttccgagttggaatgggagcttcctgggtgctgctgcagctgcccaaactgcagctgtagctgtagacctgggcctcccactccatggagcacacaggaatttatccaactctcctactctgcccctgccccagtccacc-acctagccccccaaaccaatgctgcagactcaggcatccttgaactcttggggagtctgggaacc----cccc---cacccagccccttgcaggcttggagatgcctcctcctgctgcctggcctctcccagctcctggctctgtgctctgatgtcagagtgcggttgggatccagcagggcactgtcacagcccagccaggtgtgcacacattgggagcagtgctg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107981036 709 - 132174527 AAGAAAGGATTTATCAGGAgctgggcacagcggctcatgcctgtaatcccagccattttagaaggcagagtcaggaagattgcttaaggccagatcttagagatcaacctgggcaatatagctagacccccatctctac--aaaa--caca-aaacaattagatggacattgtggccacatgcttatggccccagctactggggaggctgaggt-aaaagatcactttggcccaggagtttgaggccacagtgagTTA---TTGTGATGACagcggctgctaacatcacaccagctgcagcggggaggtgaagatggggctgtatactccctggagttggcaggacggggacaagtggaagccctgccccttctgagttataatgggagctccctgggtgctgctgcagctgctcaaactgcagctatagttgcagacctgggactcccactccatggagcaggcagtagtcaagccacctccccaactctgcccttgcct---tcccccgactcagcc------accagggcttcagactcaggtattcttgcactcttggggggcctgggaagg----cccc-----tcttgctgcttccaggcttagaggagtctactcctgctgcctggtctctcccagatcctgacactattctctaatctcagagtggg--ttgggcccagccaggtgctgtcacagcccagccaggtgtgcatacattaggaacagtactg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10771236 707 + 21366645 aataaaGGATTTATCAGGAgctgggcacagtggctcatgcctgtaatcccagcca-tttagaaggcagaggtcagaagattgcttaaggccagatcttagagatcaaccaaggcaatatagctagacccccatgtctac--aaaa--catagaaacaattagatgggcattgtggccgaatgcttatggccccagctattggggaggctgaggt-aaaagat----------caggagtttgaggctacagtgagctatggttgtgATGACagcggctgataacatcatgccaactgcagcggggaggtgcagctggggctgtatactccctggagttggcaggatggggacaagtggaagccctgccccttccgagttgtaatgggaactccctgggtgctgctgcagctgtccaaactgcaactatagttgtagacccgagactcccactccatggagcaggcaggagtcaagccacctccccaactctgcccttgcctcagccccccgactcagcc------accagggcttcagactcaggcattcttgcactcttggggggcctgggaagg----cccc-----tcttgccccttacaggctcagagatgcctactcctgctgcctggcctctcccagatcctggcactattctctgatctcagggagggattggggcccagccaggtgctgtcacagcccagtcaggtgtgcatactttaggaacagtagtg i saiBol1.JH378136 I 1961 C 0 s cebCap1.NW_016107324v1 9293779 716 + 13033340 AAGAAAGGATTTATCAGGAgctgggcacagtggctcatgcctgtaatcccagcca-tttagaaggcaaaggctggaagattgcttaaggccagatcttagagatcaacctgggcaatatagctagacccccatctctac--aaaa--cataaaaacaattagatgggcattgtggccacatgcttatgaccccagctattggggaggctgaggt-aaaagatcacttgggc-caggagtttgaggctacagtgaactatgattgtgATGACagtggctgataacatcatgccagctgcagcggggaggtgcagctggggctatatactccctggagttggcaggacggggacaagtggaagtcctggcccttccgagttgtaatgggagctccctgggtgctgctgcagctgccgaaactgcagctatagttgtagacctgggactcccactccgtggagcaggtaggagtcaagccacctccccaactctgcccttgcctcagccacatgactcagcc------accagagcttcagactcaggcattcttgcactcttggggggcctgggaagg----cccc-----tcttgccccttccaggctcagagaggcctactcctgctgcctggcctctcccagatcctgacactattctctgatctcagagcaggtttggagcccagccaggtgctgtcatagcccagccaggtgtgcatactttaggaacagtattg i cebCap1.NW_016107324v1 I 1984 C 0 s aotNan1.NW_018501505v1 6373405 717 - 11604778 aagaaaGGATTTATCATTAgctgggcacagtggctcatgcctgtaatcccagcca-tttagaaggcagaggcaggaagattgcttaaggccaggacttagagatcaacctgggcaatatagctagacccccatctctac--aaaa--cataaaaccaattagatgggcattgtggccacatgcttatggccccagctattggggaggctgaggt-aaaagatcacttgggcccaggagtttgaggctatagtgagctatgattgtgATAACagcggctgctaacatcatgccagctgtagtggggaggtgcagctggggctgtatactccctggagttggcaagacggggacaagtggaagccctgccccttccaagttgtaatgggagctccctgggtgctgctgcagctgcccaaactgcagctatagttgtagacctggaaatcccactccatggagcaggcaggagtcaagccacctccccaactctgcccttgcctcagccccccgactcagcc------accagggcttcagacataggcattcttgcactcttggagggcctgggaagg----cccc-----tcttgccccttccaggctcagaggtgcctactcctgctgcctggcctctcccagatcctgggactattctctgatttcagagtggggttggggcccagccaggtgctgtcacagcccagccaggtgtgcatacattgggaacagtactg i aotNan1.NW_018501505v1 I 1994 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e dasNov3.JH579377 1058517 0 + 2868945 C e canFam3.chr30 26792941 0 - 40214260 C e otoGar3.GL873530 36206728 0 - 36342412 C e macNem1.NW_012010577v1 26931140 3 + 40200012 I e macFas5.chr7 147858059 3 - 171882078 I e rheMac8.chr7 146180475 3 - 169600520 I a score=7505537.000000 s hg38.chr14_KI270725v1_random 143522 799 + 172810 acatgccagtcccctgccacctcagtcccttctggactttggacactgagaagcaggagcatgggaggggaagatgagggggtccgagggtggcttggcactggcctgcaagtgccccttgatgccagcagcctgggtgccatggatggttgtgggaggcagacaggctcctgggtggaaggtgatgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggcaaaactcatggtg-tttttcctgggcccgcccatggctgcccatggaccaatgggcatacatttcctcccctctgacatccataaaagcccaggactcagccagaacagggcagagggcagaggagggaagaatagaggcaggaaggagctatcctttctgctgatagctggagacaatgggagggccag-------------ctgttttctctgctgaatgcttcagagacctgcagagatgtctgggaactaccagctgcagacaggagcaaccctctccagggtttccctttctcctgagagctgaacacttgacagaacaacct--agggaggagctacccactatgggtctcctctgagctgttctaacacttaataaagctcctctcctttaacccttcacttgtctacctacaccatttttcctggaagcaggacaagaactcgggcaaagatgccaccaaccac---agtttccaaaccagaaaatcgacaccccaaagattccgtaacaattgcacaa-----ctgcactccagcctaggtgacagagtgagaccctgactcttaaaaa-----aa s panTro5.chr1 126769563 799 + 228573443 acatgccaatcccctgtcacctcagtcccctctggactttggacaccgaggagcagaagcatgggaagggaagctgagggggtctgagggtggctgggcactggcctgcaagtgccccttgatgccagcagcctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggggagaggtccccagtgaagccccacctgcaggctaggctgccagttctgcagactggaggcaaaacttatggtgctttttcctgggcccacccatggctgcccatggaccaatgagcatacacttcctctcctctgacgtccataaaagcccaggactcagccagaacagggcagaagacagaggagggaagactagaggcaggaaggagctatcctttctgctgatagctggatacaatgggaaggccag-------------ctactttctctgctgaatgcttcagagacctgcagagttgtctgggaactactagctgcagacaggagcaaccttctccagggtttccctttctgctgagagctgaacacttgacagaacaacct--atagaggagctacccactatgggtctcctctgagctgttctaacacttaataaaactcctctcctttaacccttcacttgtctacctacaccattcttc-tggatgcaggacaagaactcgggcaaagatgccaccaaccac---agttttccaaccagaaaatcgacaccccaaagattctgtaacaattgcacca-----ctgcactccagcctaggtgacagagtgagaccctgactcttaaaaa-----aa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55382034 803 - 99763055 acatgccag-cccccaccacctcagccccctctgaactttgaacactgaggagcaggagcatgggaggggaagctgaggggatctgagggtggctgggcactggcctgcaagtgccccttgaggccagaagcctgggtgccatggatggctgtgggaggcagacaggttcctgggtggaagggggtgggtcctcagtgaaggcccacctgcaggctaggctgccagtcctgcagactagaggggaaactcatggtgctttttcctgggcccgcccatggctgcccatggaccaatgggcatgcacttcctcccctctgacatccataaaagcccaggactcagccagaacagggcagaagacagaggagggaagactagatgcagaaaggagctatcctttctgctaatagctggagacaatgaaagggccag-------------ctattttctctgctgaatgcttcagagacctgcagagatgtctgggaactaccaggtacagacaggagcaaccctctccattgcttccctttctgctgagagctgaacactcgacagaacaacctacagagaggagctacccactatgggtctcctcggagctgttctgacacttaataaagctcctctcctttcacccttcacttttctacctacaccattcttcctggatgcaggacaagaactggggcaaagatgccaccaaccac-agaggtttccaaccagaaaatcgacaccccaaagattctgtaacaattgcacca-----ctgcactccagtctaggtgacagagtgagatcctgactcttaaaaa-----aa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 6102 797 + 21985 acatgccagtcccctgccacctcagccccctctggactttggacaccgaggagcaggagcatgggaggggaagctgagggggtc-gagggtggctgggcactggcctgcaagtgccccttgatgccagcagcctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggggatgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggcaaaactcatggtgctttttcctgggcccgcccatggctgcccatggaccaatgggcatacacttcctcccctctgacatccataaaagcccaggactcagccagaacagggcagaagacagaggagggaagactagaggcaggaaggagctatcctttctgctgatagctggagacaatgggagggccag-------------cta-tttctctgctgaatgcttcagagacctgcagagatgtctgggaactaccagctgcagacaggagcaaccctctccagggtttccctttctgctgagagctgaacacttgacagaacaacct--agagaggagctacccactatgggtctcctctgagctgttctaacacttaataaagctcctctcctttaacccttcacttgtctacctaca-cattcttcctggatgcaggacaagaactcgggcaaagatgccaccaaccac---agttttccaaccagaaaatcgacaccccaaagattccgtaacaattgcacca-----ctgcactccagcctaggtgacagagtgagaccctgactcttaaaaa-----aa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53528402 804 + 121039945 acatgccagccccctgccacctcagccccctctgaactttgaatactgaggagcaggagcatgggaggggaagctgagggggtctgagggtggctgggcactggcctgcaagtgccccttgatgccagcagcctggttgccatggatggctgtgggaggcagacaggctcctgggtggaagggggtgggtccccagtgaagcccctcctgcaggctaaactgccagtcctgcagactggaggggaaactcatggtgctttttcctgggcccacccatcgctgcccatggaccaatgggcatacacttcctcccctctgacatccataaaagcccaggactcagccagaacagggcagaagacagaggagggaagactagatgcagaaaggagctatcctttctgctaatagctggagacaatgagagggccag-------------ctactttctctgctgaatgcttcagaggcctgcagagatgtctgggaactactagctgcagacagaagcaaccctctccagggcttccctttctgctgagagctgaacactcgacagaacaacctacagagaggagctgcccactatgggtctcctcggagctgttctaacacttaacaaagctcctctcctttcacccttcacttgtctacctacaccattcttcctggatgcaggacaagaactcaggcaaagatgccaccaaccac-agaggtttccaaccagaaaatcgacaccccaaagattctgtaacaattgcacca-----ctgcactccagcctaggtgacagagtgagaccctgactcttaaaaa-----aa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146180478 800 - 169600520 acatgccagccccctgccacctcagcctcctctggactttgggcactgaggagcaggagcatgggaggggaagctgtgggg-tctgagggtgacttggcactggcctacaagtgccccttgatgccagcagtctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggaggtgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggggaaactcagggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaagcctaggactcagccagaacagggcagaagacagaggagggaagactagctgcagaaaggagctaccctctctgctgatagctggagacaatgggagggccag-------------ctactttctctgctgaatgcttcagagagctacagagatgtctgggaactatcagctacagagaggagcaaccctctccagggtttccctttctgctgagagctgaacacttggcaaaacaacctacagagaggagctacccactatgggtctcctctaagctgttctaacacttaataaagctcctctctattcacccttcacttgtctacctacaccattcttcttggatgcaggacaagaactcgggcaaagatgccacgaaccacaagaggtttccaaccagaaaatcgacaccccaaagattctgtaacaattgcacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i rheMac8.chr7 I 3 C 0 s macFas5.chr7 147858062 800 - 171882078 acatgccagccccctgccacctcagcctcctctggactttgggcactgaggagcaggagcatgggaggggaagctgtgggg-tctgagggtgacttggcactggcctacaagtgccccttgatgccagcagtctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggaggtgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggggaaactcagggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaagcctaggactcagccagaacagggcagaagacagaggagggaagactagctgcagaaaggagctaccctctctgctgatagctggagacaatgggagggccag-------------ctgctttctctgctgaatgcttcagagagctacagagatgtctgggaactatcagctacagagaggagcaaccctctccagggtttccctttctgctgagagctgaacacttggcaaaacaacctacagagaggagctacccactatgggtctcctctaagctgttctaacacttaataaagctcctctctattcacccttcacttgtctacctacaccattcttcttggatgcaggacaagaactcgggcaaagatgccacgaaccacaagaggtttccaaccagaaaatcgacaccccaaagattctgtaacaattgcacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i macFas5.chr7 I 3 C 0 s macNem1.NW_012010577v1 26931143 800 + 40200012 acatgccagccccctgccacctcagtctcctctggactttgggcactgaggagcaggagcatgggaggggaagctgtgggg-tctgagggtgacttggcactggcctacaagtgccccttgatgccagcagtctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggaggtgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggggaaactcagggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaagcctaggactcagccagaacagggcagaagacagaggagggaagactagctgcagaaaggagctaccctctctgctgatagctggagacaatgggagggccag-------------ctactttctctgctgaatgcttcagagagctacagagatgtctggaaactatcagctacagagaggagcaaccctctccagggtttccctttctgctgagagctgaacacttggcaaaacaacctacagagaggagctacccactatgggtctcctctaagctgttctaacacttaataaagctcctctctattcacccttcacttgtctacctacaccattcttcttggatgcaggacaagaactcgggcaaagatgccatgaaccacgagaggtttccaaccagaaaatcgacaccccaaagattctgtaacaattgtacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i macNem1.NW_012010577v1 I 3 C 0 s cerAty1.NW_012000887v1 4376649 798 - 7633303 acatgccagccccctgccacctcagcctcctctggactttgggcactgaggagcaggagcatgggaggggaagctgtgggg-tctgagggtgacttggcactggcctacaagtgccccttgatgccagtagtctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggaggtgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggggaaactcagggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaagcctaggactcagccagaaca-ggcagaagacagaggagggaagactagctgcagaaaggagctaccctctctgctgatagctggagacaatgggagggccag-------------ctactttctctgctgaatgcttcagagagctacagagatgtctgggaactatcagctacagagaggagcaaccctctccagggtttccctttctgctgagagctgaacacttggcaaaacaacctacagagaggagctacccactatgggtctcctctaagctgttctaacacttaataaagctcctctctattcacccttcacttgtctacctacaccattcttc-tggatgcaggacaagaactcgggcaaagatgccacgaaccacaagaggtttccaaccagaaaatcgacaccccaaagattctgtaacaattgcacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36173859 800 + 58131712 acatgccagccccctgccacctcagcctcctctggactttgggcactgaggagcagcagcatgggaggggaagctgagggg-tctgaggttgacttgccactggcctacaagtgccccttgatgccagcagtctgggtgccatggatggccgtgggaggcagacaggctgctgggtggaaggaggtgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggggaaactcagggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaagactaggactcagccagaacagggcagaagacagaggagggaagactagctgcagaaaggagctaccttctctgctgatagctggagacaatgggagggccag-------------ctactttctctgctgaatgcttcagagagctacagagatgtctgggaactgccagctacagagaggagcaaccctcgccagggtttcgctttctgctgagagctgaacacttggcaaaacaacctacagagaggagctacccactatgggtctcctctaagctgttctaacacttaataaagctcctctctattcacccttcacttgtctccctacaccattcttcttggatgcaggacaagaactcgggcaaagatgccacgaaccacaagaggtttccaaccagaaaatcaacaccccaaagattctgtaacaattgcacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2567495 800 - 2620224 acatgccagccccctgccacctcagcctcctctggactttgggcactgaggagcaggagcatgggaggggaagctgtgggg-tctgagggtgacttggcactggcctacaagtgccccttgatgccagcagtctgggtgccatggatggctgtgggaggcagacaggctcctgggtggaaggaggtgggtccccagtgaagccccacctgcaggctaggctgccagtcctgcagactggaggggaaactcagggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaagcctaggactcagccagaacagggcagaagacagaggagggaagactagctgcagaaaggagctaccctctctgctgatagctggagacaatgggagggccag-------------ctacttcctctgctgaatgcttcagagagctacagagatgtctgggaactatcagctacagagaggagcaaccctctccagggtttccctttctgctgagagctgaacacttggcaaaacagcctacagagaggagctacccactatgggtctcctctaagttgttctaacacttaataaagctcctctctattcacccttcacttgtctacctacaccattcttcttagatgcaggacaagaactcgggcaaagatgccacgaaccacaagaggtttccaaccagaaaattgacaccccaaagattctgtaacaattgtacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8396895 800 - 10629787 acatgccaaccccctgccacctcagcctcctctggactttgggcactgaggagcaggagcatgggaggggaagttgagggg-tctgagggtgactgggcactggcctacaagtgccccttgatgccagcagtctgggtgacatggatggctgtggaaggcagacagactcctgggtgcaagggggtgggtccccagtgaagccccatctgcaggctaggctgccagtcctgcagactggaggggaaactcatggtgctttttcctgggcccacccatggctgcccatggaccaatgggcatacacttccttccctctgatgtccataaaaggccaggactcagccagaacagggcagaagacagaggagggaagactagctgcagaaaggagctaccctctctgctgatagctggagacaataggagggccag-------------ctactttctctgctgaatgcttcagagagctacagagatgtctcggaactaacagctgcagagaggagcaaccctctccagggtttccctttctgctgagagctgaacacttgacaaaacaacctacagagaggagctatccactatgagtcttctctaagctgttctaacacttaataaagctcctctctattcacccttcacttgtctacctacaccattcttcttggatgcaggacaagaactcaggccaagatgccacgaaccacaagaggtttccaaccagaaaatcaacaccccaaagattctgtaacaatcgcacca-----ctgcactccagcctaggtgaca----gagaccctgactcttaaaaa-----aa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107981745 814 - 132174527 acatgccagcctcctggtacctcaaccacctctggattttgggcactgagaagcagaagtgtgggaggggaagctgaggggatctgagggtgcctgggcactggcctgcaggtgccccttgatgccagcagcctgggtggtatggatggacctgggaggcagacaggctcctgggtggaagtgggtgggt-cccagtaaaatttctgcttcaggct--------agtcctgcagactagaggggaaattcatggtgctttttccttggcccacccatggctgcccatggctcaatggacacacatgtcctcccctctgatatccat-aaagcccaggattcagctggagcatggcagaagacagaggagggaagactagctgcagagaggagctaccctctctgctgatagctggagagaatg-gagggccaggtgcagagaggaactaccctctctgctaagtgcttcagagacctgcag-gatgtctggggactaccagctgcagagaggagcaaccctctccagggcttccttttctgc-gagagctgaacacctgacaggatgacctacagaaaggagctacccactatgggtctcatttgagctgttctaacacttaatatagctcctctttattccttattaacttttctgcctactccattcttcttggatgcaggataagagctcaggcaaaggctccccctgccac-ataggtttccagctagaatattgacatcccaaagattccgtaacaATTGCCCAGCAATTctgtactctagcatgggtgacagactgagaccctgactcttaaaaaaTAATAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10771943 819 + 21366645 acatgccagcctcctggtacctcaatcacctctggattttgggcactgaggaacaggagtgtgggaggggaagttgagggggtctgagggtgcctgggcactggcctgcaggtgccccttgatgctagcagcctgggtggtatgaatggacctcggaggcagacaggttcctgggtggaagggggtgggtccccagtgaagcctcaccttcaggctaggctgccagccctgcagactggaggggaaattcatggtgctttttcctgggcccacccatggctgcccatggatcaatgggcacacacttccttccctctgatgtccataaaagcccaggattcagccagagcatggcagaagacagaggagggaagactagctgcagagaggagctaccctctctgctgatagctggagacaatg-gagggccagctgcagataggaactaccgtctctgctaagtgcttcagagacctgcagagatgtctggggactaccagctgcagagaggagcagccctctccagggcttccttttctgt-gagagctgaacacctgacaggatgacctacagaaaggagttacccactatgggtctcgtctgagctgttctaacacttaatatagctcctctttattccttattcagttgtctg-ctactccattcttcccggatgcaggataagagctcaggcaaaggctccacctgccac-ataggttttcagccagaaaattgacatcccaaagattccgtaacaATTGCCCAGCAATTCTATACTTCAGCATGTGTGACAGACTGAGACCCTGACTCttaaata-----aa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9294495 765 + 13033340 acatgccagcctcctggtacctcaaccacctctggattttgggcactgaggagcagaagtgtgggaggggaagctgagggggtctgagggtgcctgcgcactggcctgcaggtgccccttgatgccagcagcctgggtggtatggatggatctgggaggcagacaggctcctgggcggaagggggcagttccccagtgaagcctcaccttcaggtgaggctgccagtcctgcagactggaggagaaattcatggtgcttttccctgggcccacccgtggctgcccatggatcagtgggcacacacttcctcccctccaatgtccataaaagcccaggattcagccagagcatggcagaagacagaggagggaagactagctgcagag------------------------------------------------------aggaactaccctctctgccaagtgcttcagagacctgcagagatgtctggggactaccagctgcagagaggagcaaccctctccagggctaccttttccgc-aagagctgaacacctgacaggatgacctacagaaaggagttaccgactgtgtgtctcgtctgagctgttctaacatttaatatagctcctctttattccttattcacttgtctgcctactccattcttcccagatgcaggataagagctcaggcaaaggctccacctgccac-ataggtttccagccagaaaattgacatcccaaaaattccgtaacaATTGTCCAGCAATTctgtactccagcgtgggtgacagactgagaccctgagtcttaaa-------aa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6374122 820 - 11604778 acaagccagcctcctggtatgtcaaccacctctggattttgggcactgaggggcaggagtgtgggaggggaagctgaggggatctgagggtacctgggcactggcctgcaggtgccccttgatgccagcagtctgggtggtatggatggacctgggaggcagacaggctcctgggtggaagggggtgggtccccagtgaagcctcaccttcaggctaggctcccagtcctgcggactggaggggaaattcatggtgcttttttctgggcccacccatgtctgcccatggatcagtgggcacacacttcctcccctctggtgtccataaaagcccaggattcagccgaagcatggcagaagacagaagagggaagactagctgcagagaggatctatcctctctgctgatagctggagacaatg-gagggccagctgcagagagaaactaccctctctgctaagtgcttcagagacctgcagagatgtctggggactaccagctgcggagaggagcaaccctctccggggcttccttttctgc-gagagctgaacacctgacaggatgacctacagaaaggagctacccactatgggtctcgtctgagctgttctaacacttaatacagctcctctttattccttattcacttgtctgcctactccattcttcctggatgcaggataagagcttaggcaaaggctccacctgccac-ataggtttccagccagaaagttgacatcccaaagattccgtaacaATTGCCCAGCAATTctgtactccagcatgggtgacagactgagaccttgactcttaaaaa-----aa i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e dasNov3.JH579377 1058517 0 + 2868945 C e canFam3.chr30 26792941 0 - 40214260 C e otoGar3.GL873530 36206728 0 - 36342412 C a score=-8986.000000 s hg38.chr14_KI270725v1_random 144321 6 + 172810 ----a---agaaa s panTro5.chr1 126770362 2 + 228573443 ----g---a---- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55382837 2 - 99763055 ----g---a---- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 6899 2 + 21985 ----g---a---- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53529206 2 + 121039945 ----g---a---- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146181278 2 - 169600520 ----a---a---- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147858862 2 - 171882078 ----a---a---- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26931943 2 + 40200012 ----a---a---- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4377447 2 - 7633303 ----a---a---- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36174659 2 + 58131712 ----a---a---- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2568295 5 - 2620224 ----aaaga---- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8397695 2 - 10629787 ----a---g---- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107982559 2 - 132174527 ----T---A---- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10772762 2 + 21366645 ----t---a---- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9295260 2 + 13033340 ----a---a---- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6374942 2 - 11604778 ----t---a---- i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1058517 6 + 2868945 AAAAA---A---- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e canFam3.chr30 26792941 0 - 40214260 C e otoGar3.GL873530 36206728 0 - 36342412 C a score=562030.000000 s hg38.chr14_KI270725v1_random 144327 64 + 172810 aaaaaaaaagaaaTTATCCACAATTTAT---TAGAT-AAGACTGTTAATAGCTTCTAATTGTGATACC s panTro5.chr1 126770364 64 + 228573443 aaaaaaaaaGGAATTATCCACAACTTAT---TAGAT-AAGACTGCTAATAGCTTCTAATTGCAATACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55382839 63 - 99763055 --aaaagaGGGAATTATCCACAAGTTAT---TAGATAAAGACTGCTAATAGCTTATAATTGTGATAAC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 6901 60 + 21985 -aaaaaaaaGGAATTATCCACAA-TTAT---TAGAT-AAGACTG-TAATAGCTTCTAATTG-GATACC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53529208 63 + 121039945 --aaaaaaaGGAATTATCCACAAGTTAT---TAGATAAAGACTGCTAATAGCTTATAATTGTGATACC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146181280 61 - 169600520 gaaaaaaaaGAAATTATCCACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGATACC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147858864 61 - 171882078 gaaaaaaaaGAAATTATCCACAAGTTAT---TA----AAGACTGCTAATAGCTTAAAATTGTGATACC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26931945 61 + 40200012 gaaaaaaaaGAAATTATCCACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGATACC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4377449 61 - 7633303 gaaaaaaaaGAAATTATCCACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGATACC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36174661 61 + 58131712 gaaaaaaaaGAAATTATCCACAAGCTAT---TA----AAGACTGCTAATAGCTTATAATTGTGATCCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2568300 61 - 2620224 aaaaaaaaagaaaTTATCCACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGATACC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8397697 60 - 10629787 a-aaaaaaagaaATTATCCACAAGTTAT---TA----AAGACTTCTAATAGTTTATAATTGTGATACC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107982561 60 - 132174527 -ATAATGAATGAATTATCCACAAGCTAT---TA----AAAACTGCTAATAACTTATAATTGTGCTACC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10772764 60 + 21366645 -ataataaattaatCATCTACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGCTACC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9295262 60 + 13033340 -ataataaaTGAATTATCCACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGCCACC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6374944 60 - 11604778 -ataataaaTAAATTACCCACAAGTTAT---TA----AAGACTGCTAATAGCTTATAATTGTGCTACC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206728 58 - 36342412 AAAATGAAAGGAATTTCCCATAAGTAATGGATA----AAGACTGTCAATTATCTACA--TGT----CT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1058523 65 + 2868945 AAATAAAAAGGAATTATCCATAAGTTAT---TGGGTAAAGACTATTAACAGCTTGCAATTGTGCCAGC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e canFam3.chr30 26792941 0 - 40214260 C a score=4020732.000000 s hg38.chr14_KI270725v1_random 144391 355 + 172810 -TTCCCGTTTGAAATG--------G---------------AAGGCATGGAAGTTAACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGCTT---TTGGCCTCTTTCAGCTCCAGTCAGACATTAGCAATGCT---CAGTTACCTTCAATATTAAGCTGGTCCTGACATGAAACTGGCAGCATTTGAGAACACTGA-CCCAGACTTGAAGGTAGATCTGGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAACCATGCATTTCTCA-TAAGCCAAATTTAGTGGA-TTTTTTCCTA-TAATTCTGAGGATAACTTTGCCTTGATTATA--TATTAAAACA-----ATTCATT--TGCTGTATCTTCATTACTGTCCCAAATGTTT s panTro5.chr1 126770428 354 + 228573443 -TTCCCATTTGAAATG--------G---------------AAGGTAAGGAAGTTAACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGCTT---TTGGCCTCTTTCAGCTCCAGTCAGACATT-GCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTTACATGAAACTGGCAGCATTTGAGAACACTGA-CCCAGACTTGAAGGTAGATCTGGAATTAGGTTTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCACGAATTTCTCA-TAAACCAAATTTAGTGGA-TTTTTTCCTA-TAATTCTGATGATAACTTTGCCTTGATTATA--TATTAAAACA-----ATTCCTT--TGCTGTATCTTCATTACTGTCCCAAATGTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55382902 355 - 99763055 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAAGTTAACACCAGGACAGTTTTCCCAAAGTTATAACCCTGCTT---TTGACCTCTTTCAGCTTCAGTCAGACATTAGCAATGCT---CAGTTACCTTCCATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGACAACTCTGA-CTCAGACTTGAAGGTAGATCTGGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATATAATCAATCATGAATTTCTCA-TAAACCAAATTTAGTGGA-TTTTTTTCTA-TAATTCTGATGATAACTTTGCCTTGATTATA--TATTAAAACA-----ATTCATT--TGCTGTATCTTCATTACTGTCCCAAATGTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 6961 354 + 21985 -TTCCCGTTTGAAATG--------G---------------AAGGGATGGAAGTTAACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGCTT---TTGGCCTCTTTCAGCTCCAGTCAGACATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCGGTCCTGACATGAAACTGGCAGCATTTGAGAACACTGA-CCCAGACTTGAAGGTAGATCTGGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACCAAATTTAGTGGATTTTTTTCCTA-TAATTCTGA-GATAACTTTGCCTTGATTATA--TATT-AAACA-----ATTCATT--TGCTGTATCTTCATTACTGTCCCAAATGTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53529271 356 + 121039945 -TTCCTATTTGAAATG--------A---------------ACGGGATGGAAGTTAACACCAGATCAGTTTTCTCAAAGTTATAACCCTGCTT---TTGACCTCTTTCAGCTTCAGTCAGACATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGAGAACACTGA-CTCAGACTTGAAGGTAGATCTGGAATTGGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACCAAATTTAGTGGAGTTTTCTTCTA-TAATTCTGATGATAACTTTGCCTTGATTATA--TATTGAAACA-----ATTCATT--TGCTGTATCTTCATTACTGTCCCAAATGTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146181341 356 - 169600520 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAGGTTGACACCAGGTCAGTTTTCCCAAAGTCATAACCCTGATT---TTTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGAGAACTCTGA-CCCAGACTTGAAGGTAGATCTAGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACTAAATTTAGTGGATTTTTTTCCTA-TAATTCTGATGATAACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCGGTATCTTCATTACTGTCCCAAATGTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147858925 356 - 171882078 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAGGTTGACACCAGGTCAGTTTTCCCAAAGTCATAACCCTGATT---TTTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGAGAACTCTGA-CCCAGACTTGAAGGTAGATCTAGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACTAAATTTAGTGGATTTTTTTCCTA-TAATTCTGATGATAACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCGGTATCTTCATTACTGTCCCAAATGTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26932006 356 + 40200012 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAGGTTGACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGATT---TTTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGAGAACTCTGA-CCCAGACTTGAAGGTAGATCTAGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTACACAATGAATCATGAATTTCTCA-TAAACTAAATTTAGTGGATTTTTTTCCTA-TAATTCTGATGATAACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCGGTATCTTCATTACTGTCCCAAATGTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4377510 356 - 7633303 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAGGTTGACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGATT---TTTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGAGAACTCTGA-CCCAGACTTGAAGGTAGATCTAGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACTAAATTTAGTGGATTTTTTTCCTA-TAATTCTGATGATAACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCAGTATCTTCATTACTGTCCCAAATGTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36174722 356 + 58131712 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAGGTTGACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGATT---TTTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTCAGAACTCTGA-CCCAGACTTGAAGGTAGATCTGGAATTAGGATTGCTGTTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACTAAATTTAGTGGATTTTTTTCCTA-TAATTCTGATGATGACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCAGTATCTTCATTACTGTCCCAAATGTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2568361 356 - 2620224 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAAGTTGACACCAGGTCAGTTTTCCCAAAGTTATAACCCTGATT---ATTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAAACTGGCAGCATTTGAGAACTCTGA-CCTAGACTTGAAGGTAGATCTGGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAAGTATACAATGAATCATGAATTTCTCA-TCAACTAAATTTGGTGGATTTTTTTCCTA-TAATTCTGATGATAACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCGGTATCTTCATTACTGTCCCAAATGTTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8397757 356 - 10629787 -TTCCCATTTGAAATG--------A---------------AAGGGATGGAAGTTGACACTAGGTCAGTTTTCCCAAAGTTATAACCCTGATT---TTTACCTCTTTCAGCTTCAGTCAGATATTAGCAATGCT---CAGTTACCTTCAATATTAAGCCAGTCCTGACATGAGACTGGCAGCATTTGAGAACTCTGA-CCCAGACTTGAAGGTAGATCTGGAATTAGGATTGCTGCTTTAAGCCCAGTATCAAGGTATACAATGAATCATGAATTTCTCA-TAAACTAAATTTAGTGGATTTTTTTCCTA-TAATTCTGATGATAACTTTGTCTTGATTATA--TATTAAAACA-----ACTCATT--TGCGGTACCTTCATTACTGTCCCAAATGTTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107982621 355 - 132174527 -TTCCCATTTGAAATG--------A---------------AAGGGATGGATGTTAACCCTGTGTAAATTTTCCCGAAGTTATAACCCTGCTT---TTGACCTCTTTCAGATTCAGACAGACATTAGCACTGCT-CACAGTTACCTTCAATATTAAGCCAGTTCTGAAATGAAACTGGCAGCATTTGAAAACACTGA-TCCAGACTTGAAGGTAGATCTGGAATTAGGATTGCCGCTTTAAGCCCAGTATCAAGGTACACAATAAATCATGAATTTCTCA-TCAACCAAACTTAGTGAA--TTTTTCCTA-TAATTCTGATTATAACTTTGCCTTGATTGCA--CATTAATACA-----ACT-ATT--TGCTGTATCTTCTTTATTGTCCCAAATGTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10772824 354 + 21366645 -TTCCCATTTGAAATG--------A---------------AAGGGATGAATGTTAACCCCAGGTAAGTTTTCCCAAAGTTATAACCCTGCTT---TTGACCTCTTTCAGATTCAGACAGACATTAGCACTGCT---CAGTTACCTTCAATATTAAGCCAATCCTGAAATGAAACTGGCAGCATTTGAGAACACTGA-CCTAGACTTGAAGGTGGATCTGTAATTAGGATTGCCCCTTTAAGCCCAATATCAAGGTACACAATAAATCATGAATTTCTCA-TCAACCAAATTTAGTGAA-TTTTTTCCTA-TAATTCTGATTATAACTTTGCCTTGATTGCA--CATTAATACA-----ACT-ATT--TGCTGTATCTTCTTTATTGTCCCAAATGTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9295322 354 + 13033340 -TTCCTATTTGAAATG--------A---------------AAGGGATGGATGTTAACCCTAGGTAAGTTTTCCCAAAGTTATAACCCTGCTT---TTGACCTCTTTCAGATTCAGACAGACATTAGCACTGCT---CAGTTACCTTCAATATTAAGCCAGTCCTCAAATGAAACTGGCAGCATTTGAGAACACTGA-CCCAGACTTGAAGGTAGATCTGTAATTAGGATTGCTGCTTTAAGCCCAATATCAAGGTCCACAATAAATCATGAATTTCTCA-TCAACCAAATTTAGTGAA-TTTTTTCCTA-TAATTCTGATTATAACTTTGCCTTGATTGCA--CATTAATACA-----ACT-ATT--TGCTGTATCATCTTTATTGTCCCAAATGCTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6375004 353 - 11604778 -TTCCCGTTTGAAATG--------A---------------AAGGGATGGATGTTAACCCCAGGTAAGTTTTCCCAAAGTTATAACCCTGCTT---TTGACCTCTTTCAGATTCAGACAGACATTAGCACTGCTGCTCAGTTACCTTCAATATTAAGCCAGTCCTGAAATGAAACTGGCAGCATTTGAGAACACTGA-CCCGGACTTGAAGGTAGATCTGGAATTAGGATTGCCGCTTTAAACCCAATATCAAGTTACACAATAAATCATGAATTTCTCA-TCAACAAAATTTAGTGAA-TTTTTTCCTA-TAATTCTGATTATAACTTTGCCTTGATTGCA--CATTAATACA-----ACT-ATT--TGCTGTATCTTCCTTATTGTCTCAAA----T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36206786 332 - 36342412 -TTCCCATTTGAAATGCCCTAATCA---------------AAGAGA---AGGTAAAC---------------------------------TT---CTGACCTCTTTCAGAACTAGGCAGACACCTACA-TGCT---CAACTATCTTTAACATTAAGCCATTTGTGATGTAAGGCTGGCAGCATTTGAAAAGAGTGACCCCATATCTGAAGGCAGATCTAGAATTAGGATTGGTGCTTTAAGTCAAGCATCCAGTTATATAATGAATCATGGATTTCTTG-TGAATCTAGTCCAGTGGA---TTTCACTG-TAATTATGATTATACTTTTGCCTTTATTACA--TGTTAATACACACCCACCCATTGCCACTAGATTTGCATTTCTGCCCCAGATGTTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26792941 349 - 40214260 -TTCCCATTTGAAATA---------------------------GGAAGGATATTAACTCCAGGTCAGCTTTTCCAAGAATAGAATCCTGCTTCTCCTGGCTTATTTCTGCTCCAGGCAATTATCTGTA-TGCT---AGACTACCTTTATTACTAAGCCAGTCCCTATCAAAGGCTAGAAGCATTTGAGAAGATGGA-AGCACACTTG-AGGCAGTTCTAGGATTAGGATT-CTGCTTTACATCCAGTATCAAGGTACACAATGGATCCTAGATTTCTCA-TGAACCAAGTCTAGTGAG---TTTTCCTATTAGTTATGGTTATA-TTTTGTCTTGATTACA--TGTTAACACA-----ATTCCCC--TGCTGGATCTACATTACTGTACCAAATGTTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1058588 354 + 2868945 CTTCCAA--GGAAGTA--------ACAAATAGCAAAAGCCAAGGAAAGAGTGCAAATCCCAGA-----TTTTGCAAGGTTAGAGTCTTGTTTCTCCTGGCCTCTTTAAACTATGGGCAGATACCTGCA-TGCT---CAACTACCTGCAGTATTAGACCA----------AGGGCTGGCAGCAGCTGAGGAGACTGA-TTCAGAAGTACA-GCAGCTTTGGAATTAGGATT---GCTCTATGTCCAGATTCAGGGTACATAATGCATCAAAGATTTCTCATTGAACCAAGCCTAGTGGA--TTTTCCAAG-TAGTTAAGATCATAATTTTTGTTTTGTTACACTTTTTAAAaag-----atttatt--tatttatttctctcccctccctccattgtct i dasNov3.JH579377 C 0 I 560 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I a score=2263340.000000 s hg38.chr14_KI270725v1_random 144746 233 + 172810 TGGGTTGACATACTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGGTTTTTACTCATATGATACCTTGTCTGATACTATCTTTATCTATCAAATAAAGGGTTTAGTATTTtcttagtcaatgtgggctgctataacggaa-aacacagattgagcgagtaaaacaataaacatttgtttttcacagatccgt s panTro5.chr1 126770782 233 + 228573443 TGGGTTGACATACTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCTAATGTAAAATGATCACACATAAATCTTAGGTTTTTACTCACATGATACCTTGCTTGATACTGTCTTCATCTATCAAATAAAGGGTTTAGTATTTtcttagtcaatgtgggctgctataacagaa-aacacagattgagtgactaaaacaataaacatttgtttttcacagatctgt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55383257 234 - 99763055 TGGGTTGACATACTGATGTTAGCTAGTGG----TTTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGGTTTTTACTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTTAGTATTTtcttagtcaatgtgggctgctataacagaa-aacctagactgagtggctaaaacaacaaacatttggttttcacagatctgt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 7315 232 + 21985 TGGGTTGACATACTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGGTTTTTACTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTTAGTATTTtcttagtcaatgtgggctgctataacagaa-aacacagattgagtggctaaaacaa-aaacatttgtttttcacagatctgt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53529627 233 + 121039945 TGGGTTGACATACTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCGCACATAAATCTTAGGCTTTTCCTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTTAGTACTTtcttagtcagtgtgggctgctataacagaa-aacatagattgagtggctaaaacaacaaacatttggttttcacagatctgt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146181697 233 - 169600520 TGGGTTGACATGCTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGGTTTTTGCTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTGAGTATTTtcttagtcaatgtgggctgctataacagaa-aaaatagattccgtggctaaaacaagaaacatttgtttttcaacgatctgt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147859281 233 - 171882078 TGGGTTGACATGCTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGGTTTTTGCTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTGAGTATTTtcttagtcaatgtgggctgctataacagaa-aaaatagattccgtggctaaaacaagaaacatttgtttttcaccaatctgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26932362 233 + 40200012 TGGGTTGACATGCTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGGTTTTTGCTCATATGATACCTTGTCTGATACTATCTTCGTCTATCAAATAAAGGGTTGAGTATTTtcttagtcaatgtgggctgctataacagaa-aaaatagattccgtggctaaaacaagaaacatttgtttttcaccgatctgt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4377866 231 - 7633303 TGGGTTGACACGCTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CCGCT--AATGTAAAATGATCACACATAAATCTTAGGTTTTTGCTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTGAGTATTTtcttagtcaatgtgggctgctataagagaa-aaaatagattccgtggctaaaacaagaaacatttgtttttcaccaatctgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36175078 232 + 58131712 TGGGTTGACATGCTGACGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGG-TTTTGCTCATATGATACCTTGTCTGATACTGTCTTCATCTATCAAATAAAGGGTTGAGTATTTtcttagtccatgtgggctgctataacagaa-aaaatagattccgtggctaaaacaagaaacatttgtttttcaccgatctgt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2568717 232 - 2620224 TGGGTTGACACGCTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---A-------CTGCTCCAATGTAAAATGATCACACATAAATCTTAGG-TTTTGCTCATATGATACCTTGTCTGATACTGTCTTCATCTATCAAATAAAGGGTTGAGTATTTtcttagtcaatgtgggctgctataacagaa-aaaatagattccgtagctaaaacaagaaacatttgtttttcacccatctgt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8398113 233 - 10629787 TGGGCGGACATGCTGATGTTAGCTAGTGG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAGTGTAAAATGATGACACATAAATCTTAGGTTTTTGCTCATATGATACCTTGTCTGATACTATCTTCATCTATCAAATAAAGGGTTGAGTATTTtcttagtcaatgtgggctgctataacagaa-aaaataggttccgtggctaaaacaagaaacacttgtttttcacccatctgt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107982976 228 - 132174527 TGGGTTGACATCCTGATGTTACCTAGTAG-----TTTTAGTCTCAAGTTTCAGTA---G-------CTGCTCCAAGGCAAGATGATCACCCATAAG-CTTAGGTTTTTACTCATATGATACCTTGTCTGATACTATCATTATCTATCAAATAAAAAGTTGAGTATTTtcttagtcagtgagggctgtt-----agaataccatagattcagtggctacaacagcaaacatttatttttcacagataggt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10773178 236 + 21366645 TGGGTTGACATACTGATGTTACCTAGTAG-----TTTTGGTCTCAAGTTTCAGTAGCTG-------CTGCTCCAATGTAAAATGATCACCCATAAG-CTTAAGTTTTTATTCATATGATACCTTGTCTGATACTATCATCATCTATCAAATAAAAAGTTGAGTATTTtcttagtcagtgtgggctgttataacagaataccatagattaagtggctaaaacagcaaacatttatttttcacagataggt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9295676 233 + 13033340 TGGGTTGACATACTGATGTTACCTCGTAG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCAACCATAAG-CTTAGGTTTTTACTCATATGATACCTTCTCTGATACTATCATCATCTATCAAATAAAAAGTTGAGGATTTtcttagtcagtgtgggctgttataacggaataccatatattgagtggctaaaacagcaaacatttatttttcacagataggt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6375357 233 - 11604778 TGGGTTGACATTCTGATCTTACCTAGTAG-----TTTTGGTCTCAAGTTTCAGTA---G-------CTGCTCCAATGTAAAATGATCACCCATAAG-CTTAGGTTTTTACTCATATGATACCTCGTCTGATACTATCATCATCTATCAAATAAAAAGTTGAGTATTTtcttagtcagtgtgggctgttataacagaataccatagattgagtggctaaaacagcaaacatttatttttcacagataggt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36207118 237 - 36342412 T-GGTTGAGATATT--TGTTAATTATTTACTTCTTTTTGGTCTCAAGTTTTAGCA---GCTGAAGTCTGCTCCAAAGGAAAAT-----CCCATAACCCCAAGGTTTTCATTCATAGGATACCTTGTCTAATACTATCTTTATCCATT-AATAAATAGTTTAGTACtatcttagtcaacctgggctgctataacagaataccaaagattctatggcttacataacaaccatttattttccacagatatgg i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26793290 97 - 40214260 ----------------------------------TTTTATT------------TA---T-------ATGCT---------------------------------------------GATAATGTGCCTAGTACTTTTT-----------------GGTTTCATATTCTAGTAGCTGGAGTCTGCT-TTAGAACAAAA---------------------------------TGATCATTCACATGACCGT i canFam3.chr30 C 0 I 37 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e dasNov3.JH579377 1058942 560 + 2868945 I a score=749182.000000 s hg38.chr14_KI270725v1_random 144979 69 + 172810 aggctgtaaatctgaaatcagggagtcagcatggttgggttctcggtgaaggctgtcttcctggtttac s panTro5.chr1 126771015 68 + 228573443 aggc-gtaaatctgaaatcagggagtcagcatggttgggttcttggtgaaggctgtcttcctagtttac i panTro5.chr1 C 0 C 0 s panPan2.chr15 55383491 69 - 99763055 aggctgtaaatctgaaatcagggagtcaacatggttgggttcttggtgaagtctgtcttcctggtttac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 7547 69 + 21985 aggctgtaaatctgaaatcagggagtcagcatggttgggttcttggtgaaggctgtcttcctggcttac i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53529860 69 + 121039945 aggctgtaaatctgaaatcagggagtcaacatggttgggttctgggtgaaggctgtctccctggtttac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146181930 69 - 169600520 aagctgcaaatctgaaatcagggagtcaacatggttgggttcttggtgaaggctgtcttcctggtttac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147859514 69 - 171882078 aagctgcaaatctgaaatcagggagtcaacatggttgggttcttggtgaaggctgtcttcctggtttac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26932595 69 + 40200012 aggctgcaaatctgaaatcagggagtcaacatggttgggttcttggtgaaggctgtcttcctggtttac i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4378097 69 - 7633303 aggctgcaaatctgaaatcagggagtcaacatggttgggttcttggtgaaggctgtcttcctggtttac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36175310 69 + 58131712 aggctgtaaatctgaaatcagggagtcaacatggttgggttcttggtgaaggctgtcttcctgctttac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2568949 69 - 2620224 aggctgtaaatctgaaatcagggagtcaacatggttgggttcttggtgaaagctgtcttcctggtttac i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8398346 69 - 10629787 aggctgtaaatctgaaatcagggagtcaacatggttggattcttggtgaaggctgtcttcctggtttac i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107983204 69 - 132174527 agagtagaaatctgagactagggagtcaacatggttgggttcttggtgaaagctgtcttcctggtttac i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10773414 69 + 21366645 agactagaaatctgagattagggagtcaacatggttgggttcttggtgaaagctgtcttcctggtttac i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9295909 69 + 13033340 agactagaaatctgagactagggagtcaacatggttgggttcttggtgaaagctgtcttcctggtttac i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6375590 69 - 11604778 agactagaaatctgagattagggagtcaacatgattgggttcttggtgaaagctgtcttcctgatttac i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36207355 67 - 36342412 aggctggaaatctgagatcaggt-gtcaacatggttaggtcttgggtgaggg-tctctacctggctgac i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58107370 815 - 182113224 I e dasNov3.JH579377 1058942 560 + 2868945 I e canFam3.chr30 26793387 37 - 40214260 I a score=1998823.000000 s hg38.chr14_KI270725v1_random 145048 201 + 172810 agatggctgtcttatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtatctctt-tctagaagggcactactttcctttggtgagggtttcatcttcatgacctaattacctcccaaaggtt-tacctcctaataccaatacattgagagttaggatttcatcatatgaatttgagg-------gATTT------------------GCAG-----TCCA----TAATAACT s panTro5.chr1 126771083 194 + 228573443 agatggctgtcttatttta--tcctcacttggaggagagaaaaatc-t--ctcttgtatctctt-cttagaagggcactactttccttcgatgagagtttcatcttcatgacctaattacctcccaaaggtt-tacctcctaacaccaacacattgagagttaggatttcaacataggaatttgagg-------gatt------------------------------ca----aaATAATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55383560 201 - 99763055 agatggccgtcttatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtatctctt-cttagaagggcactactttcctttgatggggccttcatcttcatgacctaattacctccccaaggat-tacctcctaataccaacacattgagagttaggatttcaacatacgaatttgagg-------gATTT------------------GCGG-----TTCA----TAATAACT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 7616 199 + 21985 agatggctgtcttatttta--tcctcacatggaggagagaaaaa---t--ctcttgtatctctt-cttagaagggcactactttcctttgatgagggtttcatcttcatgacctaattacctcccaaaggtt-tacctcctaataccaatacattgagagttaggatttcaacatatgaatttgagg-------gATTT------------------GCAG-----TTCA----TAATAACT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53529929 200 + 121039945 tgatggctgtcttatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtatctctt-cttag-agggcactactttcctctgatgagggcttcatcttcatgacctaattacctcccaaaggat-tacctcctaataccaacacattgagagttaggatttcaacatatgaatttgagg-------gATTT------------------GCGG-----TTCA----TAATAACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146181999 201 - 169600520 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cctagaagggcactactttcctttgataagggcttcatcttcatgacctaattacctcctaaaggat-tacttcctaataccaacacattgagagttaggattttaccatatgaatttgagg-------gATTT------------------GCAG-----TTCA----TAATAACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147859583 201 - 171882078 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cctagaagggcactactttcctttgataagggcttcatcttcatgacctaattacctcctaaaggat-tacttcctaataccaacacattgagagttaggattttaccatatgaatttgagg-------gATTT------------------GCAG-----TTCA----TAATAACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26932664 201 + 40200012 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cctagaagggcactactttcctttgataagggcttcatcttcatgacctaattacctcctaaaggat-tacttcctaataccaacacattgagagttaggattttaccatatgaatttgagg-------gATTT------------------GCAG-----TTCA----TAATAACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4378166 201 - 7633303 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcatgacctaattacctcctaaaggat-tacttcctaataccaacacattgagagttaggattttaacatatgaatttgagg-------gattt------------------gcag-----ttca----TAATAACT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36175379 201 + 58131712 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcatgacctaattacctcctaaaggat-tacttcctaataccaacacattgagagttaggattttaacatatgaatttgagg-------gATTT------------------GCGG-----TTCA----TAATAACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569018 201 - 2620224 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcatgacctaattacctcctgaaggat-tacttcctaataccaacacattgagagttaggattttaacatatgaatttgagg-------gattt------------------gcag-----ttca----TAATAACT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8398415 201 - 10629787 agatggctgtcatatttta--tcctcacatggaggagagaaaaatc-t--ctcttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcatgacctaattacctcctaaaggat-tacttcctaataccaacacattgaaagttaggattttaacatatgaatttgagg-------gATTT------------------GCGG-----TTCA----TAATAACT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107983273 202 - 132174527 agctggctgtcttactgta--ttcttacatgatggagaaaaaaa---t--cccttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcacaacctgattacctccc----------------aaTACCAACACATTAAGAGTTAGGATTTCAATGTATAAATCTGAGG-------GATTTTCAGTGGGCACACTATAATCAG-----TTCA----AAATAAGT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10773483 217 + 21366645 agatggctgtcttactgta--ctctcacatgatggagaaaaaaa---t--ctcttgtgtctctt-cttagaagagcactactttcctttaatgtgggcttcatcttcatgacctgattgcctcccaaaggat-tacctcctaataccaacacattaagagttaggatttcaacatataaatttGAAG-------GATTTTCAATGGGCACACTATAATCAG-----TTCA----AAATAAGT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9295978 217 + 13033340 agatggctgtcttactgta--ttctcacatgatggagaaaaaaa---t--ctcttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcatgacctgattacctcccaaaggat-tacctcctaataccaacacattaagagttaggatttcaacatataaatttgagg-------gATTTTCAGTGGGTACACTATAATCAG-----TTCA----AAATAAGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6375659 217 - 11604778 agatggctgtcttactgta--ttctcacatgatggagaaaaaaa---t--ctcttgtgtctctt-cttagaagggcactactttcctttgatgagggcttcatcttcatgacctgattacctcccaaaggat-tacctcctaataccaacacattaagagttaggatttcaatatagaaatttgagg-------gATTTTCAGTGGGCACACTATAATCAG-----TTCA----AAATAAGT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36207422 206 - 36342412 agacaactgtc---ttgta--tcctcacataacagaatgaaaaatcat--cttgcttgtatctt-cttatgagggcactga-tgccaatcacgagggctccaccctcatgaactaattacccttcaaagtctccgctgcctaatgccatccccttcggagttagcatttcaacatatgaatttgggggcacacagatac------------------tcag-----ttca----taacaAGT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58108185 187 - 182113224 AGATGGTTACATTGCTTTATTTCTTCACATGGCTAAGAAACAATCC-TGACTCTTTTGTTTCCTACTTACAAACATATT------------TGAGGGTCCTGTCCTCATCAACAAATTATCCACTGGGAAAC-TAC-------------CACCTTGAGACCTGGGGTTTCTACATAAGA---TAAGG-------ACTAG------------------GCAGAAGCATTCAATCCACACGTTT i mm10.chr2 I 815 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e dasNov3.JH579377 1058942 560 + 2868945 I e canFam3.chr30 26793387 37 - 40214260 I a score=2971356.000000 s hg38.chr14_KI270725v1_random 145249 231 + 172810 ACCAATGTCAACTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAGTGTTGTCTTCTTTCTCCTTCACCACCAACAGTTAGCAAGATGTCAGTTTTACTTGAGGCT-AAGTATGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT------AGTTTCCCCTTTCATAATATTTTTCATTATG s panTro5.chr1 126771277 230 + 228573443 ATCAATGTCAACTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAAATAATTGGAATTCATCTTTCCCCAGTCTGGTTCAGTGTTGTCTTCTT-CTCCTTCACCACCAACAGTTAGCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGATCCCTGTAAGCTATATCTT------AGTTTCCCCTTTCATAATATTTTTCATTATG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55383761 231 - 99763055 ATCAATGTCAGCTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGCTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTTAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT------AGTTGCCCCTTTCATAATATTTTTCATTATG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 7815 229 + 21985 A-CAATGTCAACTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAGTGTTGTCTTCTTTCTCCTTCACCACCAACAGTTAGCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT------AGTT-CCCCTTTCATAATATTTTTCATTATG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53530129 231 + 121039945 ATCGATGTCAACTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTG-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGCTCAATGTTGCCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATGTCTT------AGTTGCCCCTTTCATAATATTTTTCGTTATG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182200 231 - 169600520 ATAAATGTCAACTCGGTTCAAGCTTGAATTT-TTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT-----AAGTTGCCCCTTTCATAATATTTTCCATTATG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147859784 231 - 171882078 ATAAATGTCAACTCGGTTCAAGCTTGAATTT-TTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT-----AAGTTGCCCCTTTCATAATATTTTCCATTATG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26932865 231 + 40200012 ATAAATGTCAACTCGGTTCAAGCTTGAATTT-TTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT-----AAGTTGCCCCTTTCATAATATTTTCCATTATG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4378367 230 - 7633303 ATAAATGTCAACTCGGTTCAAGCTTGAATTT-TTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAGTGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT------AGTTGCCCCTTTCATAATATTTTCCATTATG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36175580 230 + 58131712 ATAAATGTCAACTCAGTTCAAGCTTGAATTT-TTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAAGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT------AGTTGCCCCTTTCATAATGTTTTCCATTATG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569219 230 - 2620224 ATAAATGTCAACTCGGTTCAAGCTTGAATTT-TTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCTT------AGTTGCCCCTTTCATAATATTTTCCATTATG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8398616 230 - 10629787 ATAAATGTCAACTCAGTTCAAGCTTGAATTT-TTTTGGTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCTAGTCTGGTTCAATGTTGTCTTCTTTCTCCTTCACCACCAACAGTTATCAAGATGTCAGTTTTACTTGAAGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACCCTGTAAGCTATATCGT------AGTTACCCCTTTCATAATATTTTCCATTATG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107983475 230 - 132174527 ATCAATGTCAACTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTATGGTTCAATGTTGTCTTCTTTCTCTTTCACCACCAACAGTTAACAAGATGT-CATTTTCCTTTAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACTCTGTAAGCTATATCTT------AGTTGCCCCTTTCATAATATTTTCCATTACA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10773700 231 + 21366645 ATCAATGTCAACTCAGTTCAAGCTTGAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAATCTGGCTCGATGTTGTCTTCTTTCTCTTTCACCACCAACAGTTAACAAGATGTCCGTTTTCCTTTAGGCT-AAATCTGTTTTC-GTTATCACAATAGAGAACTCTGTAAGCTATATCTT------AGTTGACCCTTTCATAATATTTTCCATCACA i saiBol1.JH378136 C 0 I 6600 s cebCap1.NW_016107324v1 9296195 231 + 13033340 ATCAATGTCAACTCAGTTCAAGCTTGAGTTTGTTTTGCTTT----------GGATGACAAATCTC-TAACGAATTTGAATTCATCTTTCCCCAGTCTGGTTCCATGTTGTCTTCTTTCTCTTTCACCACCAACAGTTAACAAGATGTCAGTTTTCCTTTAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACTCTGTAAGCTATATCTT------AGTTGCCCCTTTCATAATATTTTCCATTACA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6375876 228 - 11604778 ATCAATGTCAACTCAGTTCAAGCTTAAATTTGTTTTGCTTT----------GGGTGACAAATCTC-TAACTAATTTGAATTCATCTTTCCCCAGTCTGGTTCAATGTTG---TCTTTCTCTTTCACCACCAACAGTTAACAAGATTTCAGTTTTCCTTTAGGCT-AAGTCTGTTTTA-GTTATCACAATAGAGAACTCTGTAAGCTATAGCTT------AGTTGCCCCTTTCATAATATTTTCCATTACA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36207628 235 - 36342412 ATCATTGTCAGCGCAGCTCAAGCT--------TCCTTTTTTGGGAGGAGGAGGGTAACATATATCTTAACTAAGTTAAATTTGTCCTTTTTGAGTCTAGCCCATGGTCATTTTCTCTCTCTTTTACCACCTACAGTTATCAAGTTGCTAGTTTTCCTTGAGGCG-AAGTCTGTTTTGTTTTCTTACAATTGAGAACCCTATAACCTATATCTC------AGTTGCCCCTTTCATAATACTACTCATTATG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58108372 209 - 182113224 AGTAATGCCATTTCAG-TCTAGCTAAGTTTT-ATTTTCTCT----------GAGC--TGAATTTT-T---------------GTCCTCCATCAGTTTGGGCTAATGCTGCCTT-TTTCCGTTTTGTTTCCAGTAGATACAGAGATGTTAGTTCC-CTCAAGGTT-AACTCT-CTTCA-GCTATCACCACTAAGAACTCAGTAAAGCACATCTT------AGCTTCCCTTTTGAGTGTAGTTTTCATTATG i mm10.chr2 C 0 C 0 s canFam3.chr30 26793424 231 - 40214260 ATTAACATCAGTTCCATTCAAGCTTGAATTTGTTTTGATT-----------AAGTGATAGATCTA-TAACTTAATATAATTCACCTTTTCCCAGACTGGCTCAATGCTATCTTCTTTTTCTTATACCATTAACAGTTACTAAGACACGAGCTTTCCTTGAGGCTCAAATTCTTTTTA-AGTTTCATAATTGATGATTCCATAAGCTATATCTT------TGTTGCCCTTTTCATAATATTTTTCACTGTG i canFam3.chr30 I 37 C 0 s dasNov3.JH579377 1059502 221 + 2868945 ATCAGTGTCAGCTCAGTTCAAGCTTGGATTTGTTTTGCTTTT---------GGGTAATAGATCTA-TAAATAAGTTGAATTT----------------GCTCCATGCAGCCTTCCTTCTCTTTCACCACCAACAATTACCAAGTTGCCAGTTTTCCTTGAGGCT-AAATCTGTTTTA-GTTATCACAATTGAGAACCCTGTAAACTATATCTTATATTAAGTTGTGC-TTTCATGATATTTTTCATTATG i dasNov3.JH579377 I 560 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=2069856.000000 s hg38.chr14_KI270725v1_random 145480 149 + 172810 GAAAAAATACATTCTAAACATTGTTCCTATTCTAAGAAACTTGGCTGCATCTTTGCAACAAAAATAATGTGGACATTTACCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC s panTro5.chr1 126771507 149 + 228573443 GAAAAAATACATTCTAAACATTGTTCCTATTGTAAGAAACTTGGCTGCATCTTTGCAACAAAAATAATGTGGACATTTGCCAAATACAGTTGTAGAGA---A---AGGTAAAATCATTGATCTGAATTATTCATAAAATCACAGAAATTAGGGAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55383992 148 - 99763055 GAAAAAATGCATTCTAAACCTTG-TCCTATTCTAAGGAACTTGGCTGCATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATATAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8044 148 + 21985 GAAAAAATACATTCTAAACATTGTTCCTATTCTAAGAAACTTGGCTGCATCTTTGCAACAAAAATAATGTGGACATTT-CCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53530360 149 + 121039945 GAAAAAATGCATTCTAAACATTGTTCCTATTCTAAGAAACTTGGCTACATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCAGTGCTCTGAATTATTCTTAAAATCACAGAAATTAGGGAC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182431 149 - 169600520 GAAAAAATACACTGTAAACATTGTTCCTACTCTAAGAAACTTGGCTACATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860015 149 - 171882078 GAAAAAATACACTGTAAACATTGTTCCTACTCTAAGAAACTTGGCTACATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933096 149 + 40200012 GAAAAAATACACTGTAAACATTGTTCCTACTCTAAGAAACTTGGCTACATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTACTCATAAAATCACAGAAATTAGGGAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4378597 149 - 7633303 GAAAAAACACATTGTAAACATTGTTCCTACTCTAAGAAACTTGGCTACATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36175810 149 + 58131712 GAAAAAATACATTCTAAACATTGTTCCTATTCTAAGAAACTTGGCTGCATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCCCTGAATTATTCATAAAATCACAGAAATTAGGGAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569449 149 - 2620224 GAAAAAATACATTGTAAACATTGTTCCTACTCTAAGAAACTTGGCTACATCTTTGCAACAAAAATGATGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATTACAGAAATTAGGGAC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8398846 149 - 10629787 GAAAAAATACAttcgaaacattgttcctattctaagaaacttggctgcatctttgcaacaaaaatgatgtggaaatttgccAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGAC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107983705 148 - 132174527 GAAAAAAGGCATTCTAAACATTGTTCCTATTCTAAGAAA-TTGGCTGTGTCTTTGCAACAAAAATGAAGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGGC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10780531 149 + 21366645 GAAAAAATACATTCTAAACATTGTTCCTATTCTAAGAAACTTGGCTATGTCATTGCAACAAAAATGAAGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGGC i saiBol1.JH378136 I 6600 C 0 s cebCap1.NW_016107324v1 9296426 149 + 13033340 GAAAAAATACGTTCTAAACATTGTTCCTATTCTAAGAAACTTGGCTGTGTCATTGCAACAAAAATGAAGTGGAAATTTGCCAAATACAGCTGTAGAGA---A---AGGTAAAATTATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGGC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376104 149 - 11604778 GAAAAAATACATTCTAAACATTGCTCCTATTCTAAGAAACTTGGCTGTGCCTTTGCAACAAAAACGAAGTGGAAATTTGCCAAATACAACTGTAGAGA---A---AGGTAAAATCATTGCTCTGAATTATTCATAAAATCACAGAAATTAGGGGC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36207863 152 - 36342412 GAAAAATTACACTGTGAATGTTATTCCCATTCTAGGAACCTTGGCTGTgtctttgcaacaaaaatgaagtggaaacttgccaaatgctgctgtaaagagaga---aggtaaaatcattgctcagaattattcatggaatCACAGAATTTAGGGAC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58108581 148 - 182113224 --GATAATATATATGAAGCATTGCTCCCATTCTGGACATGTTGACCATGTTTTTGTGACAAGAGTGAAATGGAAACTTGTGGCATGCTTCTGCAGAGA---AATTAGGTAGCTCCA-TGCTCTGATTCCTTCAC-AAATCACTGACTCTGAGGAC i mm10.chr2 C 0 I 76 s canFam3.chr30 26793655 151 - 40214260 -GAAAAATACATTCTAAACATTATTCGTATTCTAAGAATCTCAGCTGTGTCTTTGTAACAAAAATGAAGTGGAAACTTGCCAAATGCTATGGTAGAGAAAGA---AGGTAAAATCATTGCTCTCAATTATTCATAAAATCACAAATTTTAGGGAC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1059723 149 + 2868945 -GAAAAATACATTCTAAATTTTGTTCCCATTCTGAGAAACTCAGCTGTGTTCCTGCAACAA-AATGAAGTGGAAACTTGCCAAATGTTGCTGCAGAGAAAGA---AGGTAAAATTATTGCTCTGAATTATTCATACAA-CATAACTTTTAGGGAC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=2139674.000000 s hg38.chr14_KI270725v1_random 145629 162 + 172810 AAACACTAAATAAGAATGAATTATTCAGTGACCCGAAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATGTACCGCAATTTACATCCTGAGTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCATCAGAACTTGTTAAACAAATGAG s panTro5.chr1 126771656 162 + 228573443 AAACACTAAATAAGAATGAATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATATACTGCAATTTACATCCTCAGTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAGAACTTGTTAAACAAATGAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384140 162 - 99763055 AAACACTAAATAAGGATGCATTATTCAGTGACCTGTAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATGTACTGCAATTTACATCCTCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAGAACTTGTTAAACAAATGAG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8192 162 + 21985 AAACACTAAATAAGAATGAATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATGTACTGCAATTTACATCCTCAGTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAGAACTTGTTAAACAAATGAG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53530509 162 + 121039945 AAACACTAAATAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATGTACTGCAATTTACATCCTCACTGTTATAAACATAGG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAGAACTTGTTAAACAAATGAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182580 162 - 169600520 AAACACTAACTAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCACGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAAAACTCGTTAAACAAATGAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860164 162 - 171882078 AAACACTAACTAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCACGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAAAACTCGTTAAACAAATGAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933245 162 + 40200012 AAACACTAACTAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCACGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAAAACTCGTTAAACAAATGAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4378746 162 - 7633303 AAACACTTACTAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATACTTTCTTTAGTTTCTCATGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAAAACTCGTTAAACAAATGAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36175959 159 + 58131712 AAACACGAAATAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACGT----ATGTTTCTCTTTTAGTGAAAAGCACCCAACAAAACTCGTTAAACAAATGAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569598 162 - 2620224 AAACACTTACTAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCACGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAAAACTCGTTAAACAAATGAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8398995 162 - 10629787 AAACACTAAATAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTCATGTAATTTGAAATGTACTGCAATTTACATCATCACTGTTATAAACACATG-ATGTTTCTCTTTTAGTGAAAAGCACCCAACAGAACTCGTTAAACAAATGAG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107983853 162 - 132174527 AAACACTAAATAAGGATGCATTATTCAGTGACCTGAAAT--TG--ATATTTTCTTTAGTTTCTACTATAACTTTAAACGTACTGCAATTTACATCTTCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAACCACCCAACAGAACTTGTTAAACAAATGAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10780680 162 + 21366645 AAACACTAAATAAAGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAATTTCTAGTGTAATTTTAAACGTACTGCAATTTACATCTTCACTGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAACCGCCCAACAGAACTTGTTAAACAAATGAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9296575 156 + 13033340 AAACACTAAATGAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTACTGTAATTTTAAATGTACTGCGATTTACATCTTCACTGTT------ATGTG-ATATTTCTCTTTTAGTGAAAACCACCCAACAGAACTTGTTAAACAAATGAG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376253 162 - 11604778 AAACACTAAATAAGGATGCATTATTCAGTGACCTGAAAC--AG--ATATTTTCTTTAGTTTCTACTGTAATTTTAAATGTACTGCAATTTACATCTTCACCGTTATAAACATATG-ATGTTTCTCTTTTAGTGAAAACCACCCAACAGAACTTGTTAAACAAAAGAG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208015 164 - 36342412 AAACACTGAACAAGGATGCATTACTCAGTGACTTGAAAC--AGACACATTATCTTTAGTTTCTCATGTAATTGGAAACATACTGCAATTTATACCCTCACTGTTACAAGCACACGTGTGGCTCTTTTTTAGGGAAAAGCACCCAACAGAA-TTGTTAGACAAATGAG i otoGar3.GL873530 C 0 I 1 s canFam3.chr30 26793806 164 - 40214260 AAACAGTAAACAAGGAAGCATTACTCAATGGCCTAAAACTGAG--AAATTTTCTTTAGTTTCTCATGTAATTTGAAATGTATTGCAATTCACACTCTCACTGTTATAAACATATGGATGGTTCTCTTTTAGTGAAAAGCACCCAATAGAA-TTGTTAGACAAATAAG i canFam3.chr30 C 0 I 6 s dasNov3.JH579377 1059872 162 + 2868945 AAACACTAAACAAGGATGCATTATCCAATGACCTGAAAC--AG--ACATTTTCTTTAGTTCCTCATGTAATTTGTAATGTACTGCAGTTCACACCCTCACTGTTAGAAACATATGGATGGGTTCCTTTTAGTGAAAAACACCCAGCAGAACT-GTTAGACAAATAAG i dasNov3.JH579377 C 0 I 6 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108729 76 - 182113224 I a score=1543779.000000 s hg38.chr14_KI270725v1_random 145791 118 + 172810 TTTTTTTCTCTTCCCATCTCTAAAAGCATTTTTGATACCTACACATCTACAAAT--------ATGTTTTAATAGACCTAAACTCTATATGATGTCATTT--------TCCCCTTGAGTACCAGAATATATATTT s panTro5.chr1 126771818 118 + 228573443 TTTTTTTCTCTTCCCATCTCTAAAAGCATTTTTTATACCTACACATCTACAGGT--------ATGTTTTAATAGACCTAACCTCTCTATGATGTCATTT--------TCCCCTTGGGTACCAGAACATATATTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384302 118 - 99763055 TTTTTTTCTCTTCCCAGCTCTAAAAGCAATTTTTATACCGATACATCTACAAAT--------ATGTTTTAATAGACCTAACCTCTCTATGATGTCATTT--------CCCCCCTGAATACCAGAATATATATTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8354 117 + 21985 TTTTTTTCTCTTCCCATCTCTAAAAGCA-TTTTTATACCTACACATCTACAAAT--------ATGTTTTAATAGACCTAACCTCTCTATGATGTCCTTT--------TCCCCTTGGGTACCAGAATATATATTT i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5809332 118 + 72422247 TTTTTTTCTCTTCTCATATCTAAAAGCATTTTTTATAGCTACACATCTACAAAT--------ATGTTTTAATAGACCTAACCTCTCTATGATGTCATTT--------TCCCCTTGGGTACCAGAATATATATTT i ponAbe2.chrUn N 0 C 0 s nomLeu3.chr6 53530671 118 + 121039945 TTTTTTTCTCTTCCCAGCTCTAAAAGCAATTTTTATACCGACGCATCTACAAAT--------ATGTTTTAATAGACCTAACCTCTCTATGATGTCATTT--------TCCCTCTGAACACCAGAATATATATTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182742 120 - 169600520 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGACACATCTACAAATG------GATGTTTTAATACACCTAACCTCTCTATGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860326 120 - 171882078 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGACACATCTACAAATG------GATGTTTTAATACACCTAACCTCTCTATGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933407 120 + 40200012 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGACACATCTACAAATG------GATGTTTTAATACACCTAACCTCTCTATGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4378908 120 - 7633303 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGACACATCTACAAATG------GATGTTTTAATACACCTAACCTCTCTACGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176118 120 + 58131712 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGATACATCTACAAATG------TATGTTTTAATGCACCTAACCTCTCTATGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569760 120 - 2620224 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGACACATCTACAAATG------GATGTTTTAATACACCTAACCTCTCTATGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399157 120 - 10629787 TTTTGTTCTCTTCCCATCTCTAAAAGCAATTTTTATACTGACACATCTACAAATG------TATGTTTTAATACACCTAACCTCTCTATGATGTCATTT--------TCCCCCTGAATACCAGAATATATATTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984015 134 - 132174527 TTTTTCTTTCTTCCCATTTCCAAAAGCAATTTTTATACTGACACATCTACAAATGTATGTTTATGTTTTAATAGACCTAACCTCTCTATTATGTCATTTTCCCCCTATCCCCCTGAACACCAGGATATATATTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10780842 124 + 21366645 TG----TTTCTTCCCATTTCCAAAAGCAATTTTTATACTGACACATCTACAAATG------TATGTTTTAATAGACCTAACCTCTCTGTTATGTCATTTTCCCCCTTTTCCCCTGAACACCAGAATATATATTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9296731 128 + 13033340 TTTTTCTTTCTTCCTATTTCCAAAAGCAATTTTTATACTGACACATCTACAAATG------TATGTTTTAATAGACCTAACCTCTCTGTTATGTCATTTTCCCCCTTTCCCCCTGAACACCAGTATATATATTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376415 128 - 11604778 TTTTTCTTTCTTCCCATTTCCAAAAGCAATTTTTATACTGACACATCTACAAATG------TATGTTTTAATAGACCTAACCTCCCTGTTATGTCATTTCTTCCCTTTCTCCCTGAACACCAGAATATATATTG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208180 116 - 36342412 CAAGCATTTCTTCTCATCTCGAAAAGCAATTTTCATACCAACGTGTCTACAAATG------TATGTTTTCATAGACCTAATCTCTCTATGATGTCATCC--------CCCC----AATACTAGAATATATATTT i otoGar3.GL873530 I 1 C 0 s canFam3.chr30 26793976 120 - 40214260 TTTTCTCCTCTTTCCATCTCTAAAAGCAATTTTCACACCAACATGTCTACAAATG------TATGTTTTAATAGACCTAATCTCTCCATGATGTCATTT--------TCCCCCAGACTACCAGAATATATATTT i canFam3.chr30 I 6 C 0 s dasNov3.JH579377 1060040 112 + 2868945 TTTTCTCCTTTTGCCATCT-------TGTCTTTTCATCGGACATGTCTACAGATG------TATGTTTTAATAGATCTAATCTCTCTATGATGTCATTT---------CCCCTTGAATACCAGAATATACATTT i dasNov3.JH579377 I 6 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108729 76 - 182113224 I a score=660940.000000 s hg38.chr14_KI270725v1_random 145909 40 + 172810 AGTCCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT s panTro5.chr1 126771936 40 + 228573443 AGTCCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384420 40 - 99763055 AGTCCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8471 40 + 21985 AGTCCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5809450 40 + 72422247 AGCCCTGTAGAATTATTTAGCTCTCAAGTGCTGAGTTACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr6 53530789 40 + 121039945 AGTCCTGTAGAATTATTTAGCTCTCAGGTACTGAGTTACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182862 40 - 169600520 AGTCCTGTAGAATTACTTAGCTCTCAGGTGCTGAGTTACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860446 40 - 171882078 AGTCCTGTAGATTTACTTAGCTCTCAGGTGCTGAGTTACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933527 40 + 40200012 AGTCCTGTAGAATTACTTAGCTCTCAGGTGCTGAGTTACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379028 40 - 7633303 AGTCCTGTAGAATTACTTAGCTCTCAGGTGCTGAGTTACT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176238 40 + 58131712 AGCCCTGTAGAATTACTTAGCTCTCAGGTGCTGAGTTACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569880 40 - 2620224 AGTCCTGTAGAATTACTTAGCTCTCAGGTGCTGAGTTACT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399277 40 - 10629787 AGTCCTGTAGAATTACTTAGCTCTCAGGTGCTGAGTTACT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984149 40 - 132174527 AGTCCTGTGAAATTATTTAGCTCTCATGTGCTGAGTTACT i calJac3.chr10 C 0 I 242 s saiBol1.JH378136 10780966 40 + 21366645 AGTTCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9296859 40 + 13033340 AGTTCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376543 40 - 11604778 AGTCCTGTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208296 40 - 36342412 AGTCCTATAGAATTATTTAGCTCTCAAGTGCTGAGTTCCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58108805 38 - 182113224 AGTCCAGCGAAATGATTCAGCT-TCAGGGACCAAA-CACT i mm10.chr2 I 76 C 0 s canFam3.chr30 26794096 40 - 40214260 ATTCCTCTAGAATTATTTAGCTCTCAGGTGCTGAGTTACT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060152 40 + 2868945 ATTTCTCTAGAATTATTTTGCTCTCAGTTACTGAGTTACT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=750896.000000 s hg38.chr14_KI270725v1_random 145949 45 + 172810 ATTTCCCAGGAGTTGCATTGCCCAAAGTACTGTGGACATTTTTCT s panTro5.chr1 126771976 45 + 228573443 ATTTCCCAGGAGTTGCATTGCCCAAAGTAATGTGGACATTTTTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384460 45 - 99763055 ATTTCCCAGGAGTTGCATTGCACAAAGTAATGTGGACATTTTTCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8511 45 + 21985 ATTTCCCAGGAGTTGCATTGCCCAAAGTAATGTGGACATTTTTCT i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5809490 45 + 72422247 AGTTCCCAGGAGTTGCATTGCCCAAAGCAATGTGGACCtttttct i ponAbe2.chrUn C 0 I 1293 s nomLeu3.chr6 53530829 45 + 121039945 ATTTCCCAGGAGTTGTATTGCACAAAGTAATGTGGACATTTTTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182902 45 - 169600520 ATTTCCCAGGAGTTGCATTGCCTAAAGTAATGTGGACATTTTTCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860486 45 - 171882078 ATTTCCCAGGAGTTGCATTGCCTAAAGTAATGTGGACATTTTTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933567 45 + 40200012 ATTTCCCATGAGTTGCATTGCCTAAAGTAATGTGGACATTTTTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379068 45 - 7633303 ATTTCCCAGGAGTTGCATTGCCTAAAGTAATGTGGACATTTTTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176278 45 + 58131712 ATTTCCCAGGAGTTGCATTGCGTAAAGTAATGTGGACATTTTTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569920 45 - 2620224 ATTTCCCAGGAGTTGCATTGCCTAAAGTAATGTGGACATTTTTCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399317 45 - 10629787 ATTTCCCAGGAGCTGCATAACCTAAAGTAATGTAGACATTTTTCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984431 45 - 132174527 ATTTCCCAGGAGTTGCATTGCCCAAAGTAATGTGGACATTTTTCT i calJac3.chr10 I 242 C 0 s saiBol1.JH378136 10781006 45 + 21366645 ATTTCCCAGGAGTTGCATTGCCCAAAGTAATGTGGACATTTTTCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9296899 45 + 13033340 ATTTCCCTGGAGTTGCATTGCCCAAAGTAATGTGGACATTTTTCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376583 45 - 11604778 ATTTCCCAGGAGTTGCATTGCCCAAAGTAATGTGGACATTTTTCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208336 45 - 36342412 ATTTCCCAGGAGCTGCATTGCCCTAAGTAACGTGGACATTTTTCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58108843 44 - 182113224 GCTTCTCTGGAGCAGCAGTGC-TAGAGAACTGTGGACACTTTTCT i mm10.chr2 C 0 C 0 s canFam3.chr30 26794136 45 - 40214260 ATTTCCCTGGAGTTGCATTGCCCAAAGTAATGTGGGCATTTTTCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060192 45 + 2868945 ATTTTCCTAGAATTGCGCTGCCCAAAGTAATGCAGACATTTTTCT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=1013061.000000 s hg38.chr14_KI270725v1_random 145994 79 + 172810 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTTACATTTTGTACCTGTTTTGATTGTTTTT---TTCCTCTCTATG s panTro5.chr1 126772021 79 + 228573443 CATTTTAAATTTCACCTGACATGGTCCTTTGGTTTTGTTACATTTTGTACCTGTTTTGATTGCTTTT---TTCCTCTCTATG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384505 79 - 99763055 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTATTGATTGTTTTT---TTCCTTTCTATG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8556 79 + 21985 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTTACATTTTGTACCTGTTTTGATTGTTTTT---TTCCTCTCTATG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53530874 79 + 121039945 CATTTTAAATTTCATCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTTTTGATTGTTTTT---TTCCTCTCTACG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146182947 75 - 169600520 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTT----TTGTTTTT---TTCCTCTCTATG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860531 75 - 171882078 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTT----TTGTTTTT---TTCCTCTCTATG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933612 75 + 40200012 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTT----TTGTTTTT---TTCCTCTCTATG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379113 75 - 7633303 CATTTTAAATTTCACCTCACATCGTCCTTTGGTTTTGTAACATTTTGTACCTGTC----TTGTTTTT---TTCCTCTCTATG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176323 75 + 58131712 CATTTTAAATTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTT----TTGTTTTT---TTCCTCTCTATG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2569965 75 - 2620224 CATTTTAAATTTCACCTCACATCGTCCTTTGGTTTTGTAACATTTTGTACCTGTC----TTGTTTTT---TTCCTCTCTATG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399362 75 - 10629787 CATTTTAAATTTCACCTCACATGGTCCTTTGGTCTTGTAACATTTTGTACCTGTT----TTGTTTTT---TTCCTCTCCATG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984476 79 - 132174527 CATTTTAACTTTCACCTCGCATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTTTTGATTGTTTTT---TTCCTCTCCATG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781051 80 + 21366645 CATTTTAACTTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTTTTGATTGTTTTT--CTTCCTCTCCATG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9296944 79 + 13033340 CATTTTCACTTTCACCTCACATGGTCCTTTGGTTTTGTAACATTTTGTACCTGTTTTGATTGTTTTT---TTCCTCTCCATG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376628 82 - 11604778 CATTTTAACTTTCACCTCACATGGTCCTTTGATTTTGTAACATTTTGTACCTGTTTTGATTGTTTTTTTTTTCCTCTCCATG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208381 76 - 36342412 CATTTTAACTTTCACCTCAGAGAGTCCCTTGGTC-TGTAACATTTTGCAGCTGTTTTGATT--TGTT---TTCCTCTCCATG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58108887 74 - 182113224 CATTTTAACTTTCAGCTCCTGGAGTCTCTTGGTT-TGTGGCATTTTGCAGCTGTT----TGGTCTCT---CCCCTGCCCATG i mm10.chr2 C 0 I 1174 s canFam3.chr30 26794181 75 - 40214260 CATTTTAACTTTCACCTCATATGGTCCCTTGGTT-TGTAACA-TTTGCAGCTGTTTTTATT--TCTT---TTCTTCTCTGTG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060237 76 + 2868945 CATTTTAGCGCTCACCTCATATGGTCCCTTGGTT-GGTAACATTTTGCAGCTGGTTTGATT--TCTT---TTCCTCTCCATG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5809535 1293 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I a score=496605.000000 s hg38.chr14_KI270725v1_random 146073 37 + 172810 AAAATTAGTTGCCAAGTAAGGAGAAAAAGTATTGCTG s panTro5.chr1 126772100 37 + 228573443 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384584 37 - 99763055 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8635 36 + 21985 -AAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53530953 37 + 121039945 GAAATTATTTGCCAAGTAAAGAGAAAAAGTGTTGATG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183022 37 - 169600520 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860606 37 - 171882078 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933687 37 + 40200012 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379188 37 - 7633303 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176398 37 + 58131712 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i chlSab2.chr26 C 0 I 111 s manLeu1.NW_012108674v1 2570040 37 - 2620224 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399437 37 - 10629787 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i colAng1.NW_012121598v1 C 0 I 111 s calJac3.chr10 107984555 37 - 132174527 GAAATTATTTGCCAAGCAAGGAGAAAAAATGTTGATG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781131 37 + 21366645 GAAATTATTTGCCAAGTAAAGAGAAAAGGGGTTGATG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297023 37 + 13033340 GAAATTATTTGCCAAGTAAGGAGAAAAAGTGTTGATG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376710 37 - 11604778 GAAATTATTTGCCAAGTAAGAAGAAAAAGTATTGATG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208457 37 - 36342412 GAAATTCTGTGCAAAGTCAGGAGGAAAAGAGTTGATG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794256 37 - 40214260 GAAATTCTTTGCAAAGTCAGGAGAAAAAGAGTTGATG i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1060313 35 + 2868945 GGAATTCTTTGCAAAGTCAGGAATAAAAG--TTGATG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5809535 1293 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=327259.000000 s hg38.chr14_KI270725v1_random 146110 24 + 172810 TTTTTCCTTATTCAAAAATTATGG-- s panTro5.chr1 126772137 24 + 228573443 TTTTTCCTTATTGAAAAATTATGG-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384621 24 - 99763055 TTTTTCCTTATTCAAAAATTATGG-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8671 24 + 21985 TTTTTCCTTATTCAAAAATTATGG-- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53530990 24 + 121039945 TTTTTCCTTATTCAAAAATTATGG-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183059 24 - 169600520 TTTTTCCTTATTCAAAAATTACGG-- i rheMac8.chr7 C 0 I 111 s macFas5.chr7 147860643 24 - 171882078 TTTTTCCTTATTCAAAAATTACGG-- i macFas5.chr7 C 0 I 111 s macNem1.NW_012010577v1 26933724 24 + 40200012 TTTTTCCTTATTCAAAAATTACGG-- i macNem1.NW_012010577v1 C 0 I 111 s cerAty1.NW_012000887v1 4379225 24 - 7633303 TTTTTCCTTATTCAAAAATTACGG-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176546 24 + 58131712 TTTTTCCTTATTCAAAAATTATGG-- i chlSab2.chr26 I 111 C 0 s manLeu1.NW_012108674v1 2570077 24 - 2620224 TTTTTCCTTATTCAAAAATTACGG-- i manLeu1.NW_012108674v1 C 0 I 111 s colAng1.NW_012121598v1 8399585 24 - 10629787 TTTTTCCTTATTCAAAAATTATGG-- i colAng1.NW_012121598v1 I 111 C 0 s calJac3.chr10 107984592 24 - 132174527 CTTTTCCTTATTCAAAAATTATTG-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781168 24 + 21366645 CTTTTCCTTATTCAAAAATTATGG-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297060 24 + 13033340 CTTTTCCTTATTCAAAAATTATGG-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376747 24 - 11604778 CTTTTCCTTATTCAAAAATTATGG-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208494 23 - 36342412 -TTTTCCTTATTTAAAAATTACGG-- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794294 24 - 40214260 TATTTCCTTATTCAAAAATTATGG-- i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1060348 26 + 2868945 TTTTCCCTTATTTAAAAATTAAATGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5809535 1293 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=48531.000000 s hg38.chr14_KI270725v1_random 146134 5 + 172810 TAGAT s panTro5.chr1 126772161 5 + 228573443 TAGAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384645 5 - 99763055 TAGAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8695 5 + 21985 TAGAT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531014 5 + 121039945 TAGAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183194 5 - 169600520 TAGAT i rheMac8.chr7 I 111 C 0 s macFas5.chr7 147860778 5 - 171882078 TAGAT i macFas5.chr7 I 111 C 0 s macNem1.NW_012010577v1 26933859 5 + 40200012 TAGAT i macNem1.NW_012010577v1 I 111 C 0 s cerAty1.NW_012000887v1 4379249 5 - 7633303 TAGAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176570 5 + 58131712 TAGAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570212 5 - 2620224 TAGAT i manLeu1.NW_012108674v1 I 111 C 0 s colAng1.NW_012121598v1 8399609 5 - 10629787 TAGAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984616 5 - 132174527 CAGAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781192 5 + 21366645 CAAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297084 5 + 13033340 CAAAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376771 5 - 11604778 CAAAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208517 5 - 36342412 TAGGT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794318 5 - 40214260 tggat i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060374 5 + 2868945 TAGAT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5809535 1293 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=25631.000000 s hg38.chr14_KI270725v1_random 146139 2 + 172810 G-A s panTro5.chr1 126772166 2 + 228573443 G-A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384650 2 - 99763055 A-A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8700 2 + 21985 G-A i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5810828 2 + 72422247 G-A i ponAbe2.chrUn I 1293 I 193 s nomLeu3.chr6 53531019 2 + 121039945 G-A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183199 2 - 169600520 G-A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860783 2 - 171882078 G-A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933864 2 + 40200012 G-A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379254 3 - 7633303 GAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176575 2 + 58131712 G-A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570217 2 - 2620224 G-A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399614 2 - 10629787 G-A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984621 2 - 132174527 G-A i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10781197 2 + 21366645 G-A i saiBol1.JH378136 C 0 I 2 s cebCap1.NW_016107324v1 9297089 2 + 13033340 G-A i cebCap1.NW_016107324v1 C 0 I 2 s aotNan1.NW_018501505v1 6376776 2 - 11604778 G-A i aotNan1.NW_018501505v1 C 0 I 2 s otoGar3.GL873530 36208522 2 - 36342412 G-A i otoGar3.GL873530 C 0 I 3 s canFam3.chr30 26794323 2 - 40214260 g-a i canFam3.chr30 C 0 I 2 s dasNov3.JH579377 1060379 2 + 2868945 G-A i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=331566.000000 s hg38.chr14_KI270725v1_random 146141 28 + 172810 ---AAAAAatctgattaaataactctattac s panTro5.chr1 126772168 28 + 228573443 ---AAAAAATCTGATTAAATAACTCTATTAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384652 28 - 99763055 ---AAAAAATCTGATTAAATAACTCTATTAC i panPan2.chr15 C 0 I 106 s gorGor5.CYUI01005903v1 8702 28 + 21985 ---AAAAAatctgattaaataactctattac i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531021 28 + 121039945 ---AAAAAATCTGATTAAATAACTCTATTAC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183201 28 - 169600520 ---AAAAAATCTGATTAAATATCTCTATTAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860785 28 - 171882078 ---AAAAAatctgattaaatatctctattac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933866 28 + 40200012 ---AAAAAATCTGATTAAATATCTCTATTAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379257 28 - 7633303 ---AAAAAATCTGATTAAATAACTCTATTAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176577 28 + 58131712 ---AAAAAatctgattaaatatctctattac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570219 28 - 2620224 ---AAAAAATCTGATTAAATATCTCTATTAC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399616 28 - 10629787 ---AAAAAATCTGATTAAATATCTCTATTAC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984625 28 - 132174527 ---ATAAAATCTGATTAAATAAGTCTATCAc i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10781201 28 + 21366645 ---ATAAAATCTGATTAAATAAGTCTATAAT i saiBol1.JH378136 I 2 C 0 s cebCap1.NW_016107324v1 9297093 28 + 13033340 ---ATAAAATCTGATTAAATAAGTCTATTAC i cebCap1.NW_016107324v1 I 2 C 0 s aotNan1.NW_018501505v1 6376780 28 - 11604778 ---ATAAAATCTGATTAAATAAGTCTATCAC i aotNan1.NW_018501505v1 I 2 C 0 s otoGar3.GL873530 36208527 24 - 36342412 ---ATCAAATCTGATTGA----CGCCATTAT i otoGar3.GL873530 I 3 C 0 s canFam3.chr30 26794327 28 - 40214260 ---acaaaatctgattaggcaactccattgc i canFam3.chr30 I 2 C 0 s dasNov3.JH579377 1060381 31 + 2868945 aaaataaaatctgattaaatacctccaaagc i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5810830 193 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=22325.000000 s hg38.chr14_KI270725v1_random 146169 4 + 172810 agtc s panTro5.chr1 126772196 4 + 228573443 AGTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384786 4 - 99763055 AGTC i panPan2.chr15 I 106 C 0 s gorGor5.CYUI01005903v1 8730 4 + 21985 agtc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531049 4 + 121039945 AGTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183229 4 - 169600520 TGTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860813 4 - 171882078 tgta i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933894 4 + 40200012 TGTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379285 4 - 7633303 AGTC i cerAty1.NW_012000887v1 C 0 I 111 s chlSab2.chr26 36176605 4 + 58131712 tgta i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570247 4 - 2620224 TGTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399644 4 - 10629787 TGTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984653 4 - 132174527 agta i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781229 4 + 21366645 AGTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297121 4 + 13033340 AGTC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376808 4 - 11604778 AGTC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208551 4 - 36342412 AGAC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794355 4 - 40214260 agac i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060412 4 + 2868945 agtc i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5810830 193 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=1885399.000000 s hg38.chr14_KI270725v1_random 146173 160 + 172810 tttctcaactttttactgagataaacttgaaggcactgaaaaggt---gaaattttcagctattg-aaaatttagaatgtagg---ac---atcatgccgagatttgaggaaacctatcaataatttagcaagggatggtagtagata------cacaaaa----ag---caattagaagcaa s panTro5.chr1 126772200 159 + 228573443 -TTCTCAACTTTTTACTGAGGTAAACATGAAGGCACTGAAAAGGT---GAAATTTTCAGCTATTG-AAAATTTGGAATGTAGG---AC---ATCATGCCGAGATTTAAGGAAACGTATCAATAATTTAGCAAGGGATGGTAGTAGATA------CACAAAA----AG---CGATTAGAAACAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384790 161 - 99763055 TTTCTCAACTTTTTACTAAGATAAACATGAAGGCACTGAAAAGGT---GAAATTTTCAGCTATTGAAAAATTTGGAATGCAGG---AC---ATCATGCTGAGATTTGAGGAAACATATCAATAATTTAGCAAGGGATGGTAGTAGATA------CACAAGA----AG---CAATTAGAAACAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8734 160 + 21985 tttctcaactttttactgagataaacatgaaggcactgaaaaggt---gaaattttcagctattg-aaaatttggaatgtagg---ac---atcatgccgagatttgaggaaacgtatcaataatttagcaagggatggtagtagata------cacaaaa----ag---caattagaagcaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531053 150 + 121039945 TTTCTCAACTTTTTACTAAGATAAACATGAAGTCACTGAAAAGGT---GAAATTTTCAGCTATTG-AAAATTTGGAATGTAGG---AC---ACCCTGCCGAGATTTGAGGAAACGTATCAATAATTTAGCAAGG----------GATA------CACAAGA----AG---CAATTAGAAGCAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183233 152 - 169600520 TTTCTCAACTTTTTACTAAGATAAACATGAAGGCACTGAAACGGT---GAAAATTTCAGCTATTG-AAAATTTGGAATGTAGG---AC---ATCACGCCGAGATTTGAG--------TCAATAATTTAGCAAGGGATGATAGTAGATA------CACAAGA----AG---CAATTAGAAGCAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860817 152 - 171882078 tttctcaactttttactaagataaacatgaaggcactgaaacggt---gaaaatttcagctattg-aaaatttggaatgtagg---ac---atcacgccgagatttgag--------tcaataatttagcaagggatgatagtagata------cacaaga----ag---caattagaagcaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26933898 152 + 40200012 TTTCTCAACTTTTTACTAAGATAAACATGAAGGCACTGAAACGGT---GAAAATTTCAGCTATTG-AAAATTTGGAATGTAGG---AC---ATCACGCCGAGATTTGAG--------TCAATAATTTAGCAAGGGATGATAGTAGATA------CACAAGA----AG---CAATTAGAAGCAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379400 160 - 7633303 tttctcaactttttactaagataaacatgaaggcactgaaacggt---gaaaatttcagctattg-aaaatttggaatgtagg---ac---atcacgccgagatttgaggaaacgtatcaataatttagcaagggatggtagtagata------cacaaga----ag---caattagaagcaa i cerAty1.NW_012000887v1 I 111 C 0 s chlSab2.chr26 36176609 160 + 58131712 tttctcaactttttactaagataaacatgaaggcattgaaacggt---gaaaatttcagctattg-aaaatttggaatgtagg---ac---atcatgccgagatttgaggaaacgtatcaataatttagcaagggatggtagtagata------cacaaga----ag---caattagaaccaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570251 160 - 2620224 TTTCTCAACTTTTTACTAAGATAAACATGAAGGCACTGAAACGGT---GAAAATTTCAGCTATTG-AAAATTTGGAATGTAGG---AC---ATCACGCCGAGATTTGAGGAAACGTATCAATAATTTAGCAAGGGATGGTAGTAGATA------CACAAGA----AG---CAATTAGAAGCAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399648 160 - 10629787 TTTCTCAACTTTTTACCAAGATAAACATGAAGGCACTGAAAAGGT---GAACATTTCAGCTATTG-AAAATTTGGAATGTAGG---AC---ATCATGCCGAGATTTGAGGAAATGTATCAATAATTTAGCAAGGGATGGTAGTAGATA------CACAAGA----AG---CAATTAGAAGCAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984657 159 - 132174527 tttctcaac-ttttactaagataaatataaggacactgaaaaggt---gaacatttcagctattg-aaaatttggaatgtagg---gc---atcatgctgcgatttgaggaaacatatcaataatttagcaagggatggtagtggaaa------cataaga----ag---caattagaaacaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781233 160 + 21366645 TTTCTCAACTTTTTACTAGGATAAACATGAGGACGCTGAAAAGGT---GAAAATTTCAGCTATTG-AACATTTGGAATGTAGG---GC---ATCATGCTGTGATTTGAGGAAACATAGCAATAATTTAGCAAGGGATGGTAGTAGAAA------CATAAGA----AG---CAATTAGAAACAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297125 160 + 13033340 TTTCTCAACTTTTTACTAAGATAAACATGAGGACACTGAAAAGGT---GAAAATTTCAGCTATTG-AAAATTTGGAATGTAGG---GC---ATCATGCTGCGATTTGAGAAAACATATCAATAATTTAGCAAGGGATGGTAGTAGAAA------CATAAGA----AG---CAATTAGAAACAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376812 160 - 11604778 TTTCTCAACTTTTTACTAAGATCAACATGAGGACACTGAAAAGGT---CAAAATTTCAGCTATTG-AAAATTTGGAATGTAGG---GC---ATCATGCTGTGATTTGAGGAAACATATCAATAATTTAGCAAGGGATGGTAGTAGAAA------CATAAGA----AG---CAGTTAGAAACAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208555 162 - 36342412 TTTCTCTGCTGTTCAGTAAGATAAA--------CACTGAAAAGGTAAAAAAAATTCCAGCTATTG-AAAATGTAGAATGAAGG---ACAATAGCATGCCAAAATTTGAGGAAAAGTGTCAGTAGTGTAACGAGAGATGATGGTAGATA------GGCAAAACAGTAA---CGATCAGAAGCAA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794359 163 - 40214260 tgttccaatcttttactaaaatgaacatgagggcactgaaaaggt---gagaactcaggccactg-aaaatttagaatgtaagtcaac---atcatgctgcaatttgaggagaC-CATCAATAATTTAGTGAGT--TTGTGGTGGCTT------CATGAAA----AGTAACAATTAGAAGCAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060416 169 + 2868945 tatcctgaagttttactaaaataaacatgaggacattgaaagggt---gaaaattcaatccatca-aaaatttaggatgacgg---acaaaatcatgccaaaatttAAAAAAAGGCATCAATAATTTAGCAGGAGACAGTGGTGGACAGTGAACAATAACT----AG---TAATTAGAAGGAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5810830 193 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=17290.000000 s hg38.chr14_KI270725v1_random 146333 1 + 172810 a s panTro5.chr1 126772359 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384951 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8894 1 + 21985 a i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5811023 1 + 72422247 a i ponAbe2.chrUn I 193 I 470 s nomLeu3.chr6 53531203 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183385 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860969 1 - 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934050 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379560 1 - 7633303 a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176769 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570411 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399808 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984816 1 - 132174527 a i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781393 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297285 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376972 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208717 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794522 1 - 40214260 A i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060585 1 + 2868945 A i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=5479696.000000 s hg38.chr14_KI270725v1_random 146334 470 + 172810 aaggccttggattcttttcatgtt-----aaagaaaatacattctgaaagtaagtacaaagacccttt-gtatttccttcataacctgttccctaa--cagaataccaggacctatgccaagggaaaaactgtgtagatgtgttttt-c---tcttctggtgctgATATGGTCATAGGATGGGGATGCTCTCTCTTTGCTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagagaggactcctgact-cataacaaggattcagatctagagttctcata-gagtgaagagattatgtttgcaactgagaaacgaatgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TACAGAGAGCAAATGGCAGTTTAAGGCT---Gaccacctctcattccctccactatttctcacataagaata s panTro5.chr1 126772360 470 + 228573443 AAGGCCTTGGATTCTTTTCATGTT-----AAAGAAAATACATTCTGAAAGTAAGTACAAAGACCCTTT-GTATTTCCTTTATAACCTGTTCCCTAA--CAGAATACCAGGGCCTATGCCAAGGGAAAAACTGTGTAGATGTGTTTTT-C---TCTTCTGGTGCCGATATGGTCATAAGATGTGGATGCTCACTCTTTGCTATTTCTCTAACTAATCT-TATTACTACATCAATTAATATCAAAACATTTCAAGCGTAGTTACTGACAAGAGAGTAAACTAGAGTGGACTCCTGACT-CATAACAAGGATTCAGATCTAGAGTTCTCATG-GAGTGAAGAGGTTATGTTTGCAACTgagaaacaaacgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TACAGACAGCAAATGGCAGTTTAAGGTT---Gaccacctctcattccctccactatttctcacataagaata i panTro5.chr1 C 0 C 0 s panPan2.chr15 55384952 467 - 99763055 AAAGCCTTGGATTCTTTTCATGAT-----AAAGAAAATACATTCTGAAAGTAAGTACAAAGACGCTTT-GTATTTCCTTTATAACCTGTTCCGTAA--CAGAATACCAGGGCCTATGCCAATGGAAAAACTCTGTAGATGTGTTTTT-C---TCTTCTCGTGCTGATATGGTCATAGGATGGGGATGCTCTCTCTTTGCTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGTCTAGTTACTGACAAGAGGGTAAACTAGGGTGCACTCCTGACT-CATAACAAGGATTCAGATCTAGAGTTCTGATA-GAGTGAAGAGATTATGTTTGCAACTGAGAAACAAATGTAAAAACTATAAGGAATCCCTGGAGAGTCTGAAAGTCCCTGAGCCCTGA--TACAGAGAGCAAATGGCAGTTTAAGGCT---Gaccacctctcattccctccactgtttctcacat---aata i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 8895 468 + 21985 aaggccttggattcttttcatgtt-----aaagaaaatacattctgaaagtaagtacaaagacccttt-gtatttcctttataacctgttccctaa--cagaataccagggcctatgccaagggaaaaactgtgtagatgtgttttt-c---tcttctggtgctgATATGGTCATAGGATGGGGACGCTCTCTCTTTGCTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGTCTAGTTACTGACAAGAGAGTAAACTAGAGTG-ACTCCTGACT-CATAACAAGGATTCAGATCTAGAGTTCTCATA-GAGTGAAGAGATTATG-TTGCAACTgagaaacgaatgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TACAGAGAGCAAATGGCAGTTTAAGGCT---Gaccacctctcattccctccactatttctcacataagaata i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531204 473 + 121039945 AAGGCCTTGGATTCTTttcatgat-----aaagaaaatacattctgaaagtaagtacaaagacccttt-gtatttcctttataacctgttccctaa--cagaataccagggcctatgccaatggaaaaactgtgtagatgtattttt-c---tcttctggtgctgATGTGGTCATAGGACAGTGACGCTCTCTCTTCGCTATTTCTCTAACCAATCT-TATTACTATGTCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagactggactcctgact-cataacaagttttcagatctagagttctcata-gagtgaagagattatgtttgcaactgagaaacaaatataaaaactgtaaggaatcactggagagtctgaaagTCCCTGAGCCCTGA--TATAGAGAGCAAATGGCAGCCCTGATATAGAGAGCACCTCTCATTCcctccactatttctcgcatgagaata i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183386 470 - 169600520 ATGTCCTGGGATTCTTTTCATGAT-----AAAGAAAATACATTCTGAAAGTAAGTACAAAGACCCTTT-GTATTTCCTTTATCACCTGTTCCCTAA--CAGAATACCAGGGCCTATGCCAATGGAAAAACTGTGTAGATGTGTTTTT-C---TCTTCTGGTGCTGATATGGTCATAGGATGGGGATGCTGTCTCTTCACTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagagtgaactcctgact-cataacaaggattcagatctagagttctcaca-gagtgaagagattatgtttgcaactgagaaacaagtgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TATAGAGGGCAAATGGCAGTTTAAGGCT---Gaccatctctcattccctccactagtccttgcataagaata i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147860970 470 - 171882078 atgtcctgggattcttttcatgat-----aaagaaaatacattctgaaagtaagtacaaagacccttt-gtatttcctttatcacctgttccctaa--cagaataccagggcctatgccaatggaaaaactgtgtagatgtgttttt-c---tcttctggtgctgATATGGTCACAGGATGGGGATGCTGTCTCTTCACTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGTCTAGTTACTGACAAGAGAGTAAACTAGAGTGAACTCCTGACT-CATAACAAGGATTCAGATCTAGAGTTCTCACA-GAGTGAAGAGATTATGTTTGCAACTGAGAAACAAGTGTAAAAACTGTAAGGAATCCCTGGAGAGTCTGAAAGTCCCTGAGCCCTGA--TATAGAGGGCAAATGGCAGTTTAAGGCT---GACCATCTCTCATTCcctccactagtccttgcataagaata i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934051 470 + 40200012 ATGTCCTGGGATTCTTTTCATGAT-----AAAGAAAATACATTCTGAAAGTAAGTACAAAGACCCTTT-GTATTTCCTTTATCACCTGTTCCCTAA--CAGAATACCAGGGCCTATGCCAATGGAAAAACTGTGTAGATGTGTTTTT-C---TCTTCTGGTGCTGATATGGTCATAGGATGGGGATGCTGTCTCTTCACTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagagtgaactcctgact-cataacaaggattcagatctagagttctcaca-gagtgaagagattatgtttgcaactgagaaacaagtgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TATAGAGGGCAAATGGCAGTTTAAGGCT---Gaccatctctcattccctccactagtccttgcataagaata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4379561 470 - 7633303 atttcctgggattcttttcatgat-----aaagaaaatacattctgaaagtaagtacaaagacccttt-gtatttcctttatcacctgttccctaa--cagaataccagggcctatgccaatggaaaaactgtgtagatgtgttttt-c---tcttctggtgctgctATGGTCATAGGATGGGGATGCTGTCTCTTCACTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagagtggactcctgact-cataacaaggattcagatctagagttctcaca-gagtgaagagattatgtttgcaactgagaaacaagtgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TATAGAGGGCAAATGGCAGTTTAAGGCT---GACCATCTCTCATTCcctccactagtccttgcataagaata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36176770 470 + 58131712 atgtcctgggattcttttcatgat-----aaagaaaatacattctgaaagtaagtacaaagacccttt-gtatttcctttatcacctgttccctaa--cagaataccagggcctatgccaatggaaaaactgtgtagatgtGTTTTT-C---TTTTCTGGTGCTGATATGGTCATAGGATGGGGATGCTGTCTCTTCACTATTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGTCTAGTTACTGACAAAAGAGTAAACTAGAGTGGACTCCTGACT-CATAACACGGATTCAGATCTAGAGTTCTCACA-GAGTGAAGAGATTATGTTTGCAACTGAGAAACAAGTGTAAAAACTGTAAGGAATCCCTGGAGAGTCTGAAAGTCCCTGAGCCCTGA--TACAGAGAGCAAATGGCAGTTTAAGGCT---GACCATCTCTCATTCcctccactagtccttgcataagaata i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570412 470 - 2620224 ATCTCCTGGGATTCTTTTCATGAT-----AAAGAAAATACATTCTGAAAGTAAGTACAAAGACCCTTT-GTATTTCCTTTATCACCTGTTCCCTAA--CAGAATACCAGGGCCTATGCCAATGGAAAAACTGTGTAGATGTGTTTTT-C---TCTTCTGGTGCTGATATGGTCATAGGATGGGGATGCTGTCTCTTCACTATTTCTCTAACCAATCT-TATTACTGTATCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagagtggactcctgact-cataacaaggattcagatctaaagttctcaca-gagtgaagagattatgtttgcaactgagaaacaagtgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTAA--TATAGAGGGCAAATGGCAGTTTAAGGCT---Gaccatctctcattccctccactagtccttgcataagaata i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8399809 470 - 10629787 ATGTCCTTGGATTCTTTTCACGAT-----AAAGAAAATACATTCTGAACGTAAGTACAAAGACCCTTT-GTATTTCCTTTATCACCTGTTCCCTAA--CAGAATACCAGAGCCTATGCCAATGGAAGAACTGCGTAGATGGGTTTTT-C---TCTTCTGGTGCTGATATGGTCACAGGATGGGGATGCTGTCTCTTCACTACTTCTCTAACCAATCT-TATTACTATATCAATTAATATCAAAACATTTCAAGtctagttactgacaagagagtaaactagagcggactcctgact-catcacaaggattcagatctagagttctcaca-gagtggagagattatgtttgcaactgagaaaccagtgtaaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TCTAGACAGCAAATGGCAGTTTAAGGCT---GACAATCTCTCATTCcctccactagtccttgcataagaata i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107984817 457 - 132174527 aaggctttggattcttttcatgat-----aaagaaaatacattctgaaaataagtacaaagacccttt-gcatttcctttataacctgctccctaa--cagaatacgagggcccatgccaatggaaaaacagtgtagatgtgttttt-c---tcttctggtgctgGTGTGGTCATAGGATGGGGAC----TCTCTTTGCTATTTCTCTAACTAATCT-TATTACA----------ATATCAAAACATTTCAAGTCTAGTTACTGACAAGAGAGTAAGCTAGAATGGCTTCCTGACTCCCTAACAAGGATTCAGATCTAGAGATCTCATA-GAGTGAAGAGATTATGTTCGCAACTGAGAAACAAATGTCAAAACTGTAAAGAATCCCTGGAGAGTCTGAAAGTCCCTGAGCCCTGA--TATAGAGAGCAAATGGCAGTTTAAGACT---GATCACCTCTCATTATCTccactatttctcacaaaagaata i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781394 461 + 21366645 AAGGCTTTGGATTCTTTTCTTGATTAAAAAAAAAAAATACATTCTGAAAATAAGTACAAAGACCC-TT-GCATTTCCTTTATAACCTGCTCCCTAA--CAGAATACGAGGGCCCGTGCCAATGGAAAAACAGTGTAGATGTGTTTTT-C---TCTTCTGGTGCTGGTGTGGTCATAGGATGGGGAC----TCTCTTTGCTATTTCTCTAACTAATCT-TTTTACT----------ATATCAAAACATTTCAAGtctagttactgacaagagagtaagctagaatggattcctgactccctaacaaggattcagatctagagacctcata-gagtgaagagattatgtttgcaactgagaaacaaatgtcaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCCTGA--TATAGAGAGCAAATGGCAGTTTAAGACT---GAGCACTTCTCATTATCTccactacttctcacaaaagaata i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297286 457 + 13033340 AAGGCTTTGGATTATTTTCTTGAT-----AAAGAAAATACATTTTGAAAATAAGTACAAAGACCCTTT-GCATTTCCTTTATAACCTGCTCCTTAA--CAGAATACGAGGGCCCATGCCAATGGAAAAACAGTGTAGATGTGTTTTT-C---TCTTCTGTTGCTGGTGTGGTCATAGGATGGGGAC----TCTCTTTGCTATTTCTCTAACTAATCT-TATTACT----------ATATCAAAACATTTCAAGtctagttattgacaagagagtaagctagaatggattcctgactccctaacaaggattcagatctagagatctcata-gagtgaagagattatgtttgcaactgagaaacaaatgtcaaaactgtaaggaatccatggagagtctggaagTCCCTGAGCCCTGA--TATAGAGAGCAAATAGCAGTTTAAGACT---GATCACCTCTCATTATCTccactatttctcacaaaagaata i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6376973 457 - 11604778 AAGGCTTTGGATTCTTTTTATGAT-----AAAGAAAATATATTCTGAAAATAAGTACAAAGACCCTTT-GCATTTCCTTTATAACCTGCTCCCTAA--CAGAATATGAGGGCCCATGCCAATGGAAAAACAGTATAGATGTGTTTTT-G---TCTTCTGGTGCTGGTGTGGTCATAGGATGGGGAC----TCTCTTTGCTATTTCTCTAACTAATCT-TATTACT----------ATATCAAAACATTTCAAAtctagttactgacaagagagtaagctagaatggattcctgactccctaacaaggattcagatctaaagacctcata-gagtgaagagattatgtttgcaactgagaaacaaatgtcaaaactgtaaggaatccctggagagtctgaaagTCCCTGAGCCTTGA--TACAGAGAGCAAATGGCAGTTTAAGACT---GATCACCTCTAATTACCTCCACTATTTCTCACAAAAGAATA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36208718 466 - 36342412 AATATCTCGGATTCTTTCCAGGAT-----AAAGAAAAGATATCCTAA----AAGTACACAGACCCTTTCAGATTTCCCTTATAACC-GTTTCTTAA--CA-AATACAAGGGTTGATGCCAATAGGAAAAAGGTGCAGACGTGTCTTT-CCATTTTCCTAGTGCCGATGTTGTCAGAGGAGGGGAATTTTTCCTCTTCACTATCCTCCTGGCCAGCCT-TACTACTCTATCAATTAAC-TAAAAATATTTAAAGACTAGTTGCTGATAAGAAAGTAAA----AGCGGATTGCGGCCTCCCTAACAAGGATGCTGATCTAGAGAAGTCACG-GGGTGAAGGGATTATGTTTGCACCTGAAAAATAAAAATAAAAATTGTGAGGCACCTGCGGAGAGTGTGAAAGTCCCTGAGCCCTGAACAGTGGAGAGGAAATGGCAGTCTGAGgcc---agtcacctctcatctccttcaccatttcccacatatagata i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794523 442 - 40214260 AATGCTGTGGCTTCTTTTTATGAC-----AAAGAAAAGACATCCTGAAAATAAGTAGAGAAGCCCTTT-ATATAGCCCTATTA--TTGTTTCCTGA--CAAAATATAAGGACCTATGCCAATAGGGAAACTATATAGATGTACTCCTAT---TCTTCTGGTCTTGGTACAG--AGAGGATTTGGCC-----CTCTTCACCATTCCTCTAACC--TCTGTATTATCATATTAG-TAATATCGAAACATTTGCAGTATAAATTCTGGCAGGATAACAAACTGGAGTGGACTGCTATCTCCCTAACCAGAATCCAGATCTA-AGGTGTCACACAAGTGAAGGGTTCATGTTTGCACCTAAGAAGTGAATGTGGAAACTGTGAGG------------------AAGCCTTTGAGCTCTAA--TGTCCAGAAGAAATGGCAGTTGGAGGCT---GATGACCTCGTATCATTTGTACTatttctcacctaagagt- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1060586 470 + 2868945 AATGCCTTGGTTTCTTTTCATGAT-----AAAGAATAGACAT-CTGAAAATAAGTAGAAAAATCCTTT-TTATTTTCTTTATAACTGCTCCTCCAACCCAGAATACATACATCTATGACAATAGGAAAATTGTGCATTTAT-CTCTA-C---TCATCTGGTGCTGATGTGGACAGAGAAGAGGAACTTTACCTCTTCACTCTTCCTCTAACC--TCC-ATATTCTATATCAAGTCATTTCAAAATATTTGAAGtctggttactggccagatagtaaactggaatggatcgatgacttcctgactgggatctagctctagggaagtcacaggaatgaaggaatagtgtttgcatctgagaaatgaatattaaaacagcaaggaaccccaggggaatctgaaagctCCAGTGTCCTGA--TGTTCACAGGAAATAGCAGCCTGAGGCT---GATCATCTTTCATTATATCCATTTGTTCTCAAGTAggaata i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811024 470 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=15561.000000 s hg38.chr14_KI270725v1_random 146804 1 + 172810 t s panTro5.chr1 126772830 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55385419 1 - 99763055 t i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 9363 1 + 21985 t i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5811494 1 + 72422247 t i ponAbe2.chrUn I 470 I 64 s nomLeu3.chr6 53531677 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183856 1 - 169600520 t i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147861440 1 - 171882078 t i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934521 1 + 40200012 t i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380031 1 - 7633303 t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36177240 1 + 58131712 t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570882 1 - 2620224 t i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8400279 1 - 10629787 t i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107985274 1 - 132174527 t i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781855 1 + 21366645 t i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297743 1 + 13033340 t i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6377430 1 - 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36209184 1 - 36342412 t i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1061056 1 + 2868945 t i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e canFam3.chr30 26794965 0 - 40214260 C a score=603855.000000 s hg38.chr14_KI270725v1_random 146805 58 + 172810 tacagtacactcttcactgctctctctgcttcaagcttt-cccttccac-ctctctattc s panTro5.chr1 126772831 59 + 228573443 tacagtacattcttcactgctctctctgcttcaagccttgcccttccac-ctctctattc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55385420 55 - 99763055 tacagtacactcttcactg----ctctgtttcaagctttgcccttccac-ctttctattc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 9364 59 + 21985 tacagtacactcttcactgctctctctgcttcaagctttgcccttccac-ctctctattc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531678 59 + 121039945 tacagtacactcttcactgctctctctgtttcatgctttgcccttccac-ctctctattc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183857 59 - 169600520 tacaatacacccttcactgctctctctgcttcaagctttgcccttccac-ctctctattg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147861441 59 - 171882078 tacaatacacccttcactgctctctctgcttcaagctttgcccttccac-ctctctattg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934522 59 + 40200012 tacaatacacccttcactgctctctctgcttcaagctttgcccttccac-ctctctattg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380032 59 - 7633303 tacaatacacccttcactgctctctctgcttcaagctttgcccttccac-ctctctattg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36177241 57 + 58131712 tacaatacacccttcactg--ctctctgcttcaagctttgcccttccac-ctctctattg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570883 59 - 2620224 tacaatacacccttcactgctctctctgcttcaagctttgcccttccac-ctctctattg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8400280 59 - 10629787 tacaatacacccttcactgctctctctgcttcgagcttcgcccttccac-ctctctattg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107985275 58 - 132174527 tacagtaagcgcttcactgctttctctgcttcaggctttgccttccca--ctctctattc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781856 58 + 21366645 tacagtaactccttcactgctttctctgcttcaggctttgccttccca--ctctctattc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297744 58 + 13033340 tacagtaagcccttcactgctttctctgcttcaggctttgccttccca--ctctctattc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6377431 58 - 11604778 TACAGTAAGCCCTTCACTGCTTTCTCTGATTCGGGCTTTGCCTTCCca--ctctctattc i aotNan1.NW_018501505v1 C 0 I 1464 s otoGar3.GL873530 36209185 54 - 36342412 tgtaa-aaatcctgc----ttctctctgcttcaagctttgcccttttac-ctccctattc i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26794965 54 - 40214260 ---aataagcacctaactggtctctctgctgctagctttgcactatag---tctctactc i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1061057 60 + 2868945 tgcaaaaagtcccgggttgttctctctgtctctagaattgcctttcaacagtctctacgc i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811495 64 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=65397.000000 s hg38.chr14_KI270725v1_random 146863 5 + 172810 cacag s panTro5.chr1 126772890 5 + 228573443 cacag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55385475 5 - 99763055 cacag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 9423 5 + 21985 cacag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531737 5 + 121039945 cacag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183916 5 - 169600520 cacag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147861500 5 - 171882078 cacag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934581 5 + 40200012 cacgg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380091 5 - 7633303 cacag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36177298 5 + 58131712 cacag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570942 5 - 2620224 cacag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8400339 5 - 10629787 cacag i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107985333 5 - 132174527 cacag i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781914 5 + 21366645 cacag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297802 5 + 13033340 cacag i cebCap1.NW_016107324v1 C 0 C 0 s otoGar3.GL873530 36209239 5 - 36342412 cacag i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26795019 5 - 40214260 cgtag i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1061117 5 + 2868945 catag i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811495 64 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I a score=32639.000000 s hg38.chr14_KI270725v1_random 146868 3 + 172810 aga s panTro5.chr1 126772895 3 + 228573443 aga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55385480 3 - 99763055 agc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 9428 3 + 21985 aga i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5811559 3 + 72422247 aga i ponAbe2.chrUn I 64 I 930 s nomLeu3.chr6 53531742 3 + 121039945 agc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183921 3 - 169600520 agc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147861505 3 - 171882078 agc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934586 3 + 40200012 agc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380096 3 - 7633303 agc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36177303 3 + 58131712 agc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570947 3 - 2620224 agc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8400344 3 - 10629787 agc i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107985338 3 - 132174527 agc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781919 3 + 21366645 agc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297807 3 + 13033340 agc i cebCap1.NW_016107324v1 C 0 C 0 s otoGar3.GL873530 36209244 3 - 36342412 agc i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26795024 3 - 40214260 agt i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1061122 3 + 2868945 aac i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I a score=1036282.000000 s hg38.chr14_KI270725v1_random 146871 96 + 172810 aggtagaatgctcctcttaaaatacaaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca s panTro5.chr1 126772898 96 + 228573443 aggtagaatgctcctcttaaaataccaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55385483 96 - 99763055 aggtagaacgttcctcttaaaatacaaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattga i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 9431 96 + 21985 aggtagaatgctcctcttaaaatacaaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531745 96 + 121039945 aggtagaatgttcctcttaaaatacaaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146183924 96 - 169600520 aggtagagtgttcctcttaaaatacaaggtgaattattttactcatctgcttaaaaatttt---------tcaatggcttctcatctcattctgaataaaattca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147861508 96 - 171882078 aggtagagtgttcctcttaaaatacaaggtgaattattttactcatctgcttaaaaatttt---------tcaatggcttctcatctcattctgaataaaattca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934589 96 + 40200012 aggtagagtgttcctcttaaaatacaaggtgaattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380099 96 - 7633303 aggtagagtgttcctcttaaaatacaaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36177306 96 + 58131712 aggtagagtgttcctcttaaaatacaaggtggattattttactcatctgcttaaaaacttt---------tcaatggcctctcatctcattctgaataaaattca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2570950 96 - 2620224 aggtagagtgttcctcttaaaataccaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8400347 96 - 10629787 aggtagagtgttcctcttaaaatacaaggcggattattttactcgtctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattca i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107985341 96 - 132174527 agacagtgtggtcctcttaaaatgtaaggtggattattttactcatctgcttgaaaacttt---------tcaatggattctcatctcattccgaataaaactga i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10781922 96 + 21366645 aggcagagtggtcctcttaaaatataaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattga i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297810 96 + 13033340 ggacagagtggtcctcttaaaatataaggtggattattttactcatctgcttaaaaacttt---------tcaatggcttctcatctcattctgaataaaattga i cebCap1.NW_016107324v1 C 0 C 0 s otoGar3.GL873530 36209247 74 - 36342412 tggtaaaatataattcctag-------------------cactcat---cttaaaaccatt---------tcactggcttcccatctcattctgaatacagttca i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26795027 105 - 40214260 aggtacagtgaccttgttgaaatataaagcagataatttgactcttctgctgaaacacattgttctgctatcagtggcttcctatcctatccagattaaaattca i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1061125 86 + 2868945 agggagagtgg---tcttaaagtatgaggcagatcatttcactcttctgcttaaaaccctt---------tcaatgactactcat-------tgtatatagttca i dasNov3.JH579377 C 0 I 1362 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I a score=7251480.000000 s hg38.chr14_KI270725v1_random 146967 770 + 172810 aagtgctttccaggcttacaagtccctgtacgatcctgagccttgacaatatctctgacaaaatctccagcct-cccattggtcactcctgctctatcacagtagtgtacttgctgctgttttgaaatatagaaagcatg-attttacttcagtgtctttatccttgttattttctctgcctgcctttttctgtgtcttgggcattccatatgactcatctcctcattcccctt-agtcctttttccatgtggcatttgaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatatccttacagcatttatcattaccatttattagcttatttgtctttccttactaaaatgtaaactaaatacagacagaa-atttttgtAATTA----aaaaa-----cacataacaaaaaaatctaccatcttaacaaaattttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagaaatctagaa-tgtttttatcttgcttgactgaaactctacacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacaactaccattttatcttgtgtttccatgtgtttggctactttcaatacatcatataaatggaatcacgatatatttgtgtttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--ataagacagaattttccttttgaaggcttactaatattccat-t s panTro5.chr1 126772994 769 + 228573443 aagtgctttccaggcttacaagtccctgtacgatcctgagccttgacaatatctctgacaaaatctccagcct-cccattggtcactcctgctctgtcacactagtgtccttgctgttgttttgaaatatagaaagcatg-attttacttcattgtctttatccttgttattttctctgcctgccttcttctgtgtctttggcattacatatgactcatctcttcattcccctt-agtcctttttccatgtggcatttgaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatatccttacagcatttatcattaccatttattagcttatttgtctttccttactaaaatgtaaactaaatacagatagaa-atttttgtAATTA----aaaaa-----cacataacaaaaaaatctaccatgttaacaaaattttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacaggtgaaatctagaa-tgtttttatcttgcttgactgaaactccacacctggtgaacagcaactccagatttcctgtttcct-ccagaccctgaaaactaccattttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcaagatatatttgtctttgtgtctggcttatttcacttagcaaaatatccttaagattgatacatgttgaa--atatgacagaatttcccttttaaaggctgaataatattccat-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55385579 769 - 99763055 aagtgctttccaggcttacaagtccctgtacgatcctgagccttgactctatctctgacaaaatctccaacct-cccattggtcactcctgctctgtcacactagtgtccttgctgttgttttgaaatatagcaagcatg-atttcatttcagtgtctttatccttgttactttctctgcctgccttgttctgtgtcttgggcattccatatgactcatctcctcattcccctt-agtcctttttccatgtggcattttaatatagaaatattcactatctaaaattatactcccatatccataacttcttttattgctctacatatccttacagcatttatcattaccatttatcagcttatttgtctttccttactaaaatgtaaactaaatacagacagaa-atttttgtAATTA----aaaaa-----cacataac-aaaaaatctaccatcttaacaaaaatttaagtttgcagaacatt-ttgttaatgatatacatattgttgtacagcagaaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgttttct-ccaggccctgacaactaccattttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcacgagatatttgtctttgtgtctggcttatttcacttagcacaatatccttaagattgatatatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i panPan2.chr15 C 0 I 976 s gorGor5.CYUI01005903v1 9527 764 + 21985 aagtgctttccaggcttacaagtccctgtacgatcctgagccttgacaatatctctgacaaaatctccagcct-cccattggtcactcctgctctgtcacactagtgtccttgctg-tgttttgaaatatag-aagcatg-attttacttcagtgtctttatccttgttattttctctgcctgccttcttctgtgtcttgggcattccatatgactcatc---tcattcccctt-agtcctttttccatgtggcatttgaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatatccttacagcatttatcattaccatttattagcttatttgtctttccttactaaaatgtaaactaaatacagacagaa-atttttgtAATTA----aaaaa-----cacataac-aaaaaatctaccatcttaacaaaattttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagaaatctagaa-tgtttttatcttgcttgactgaaactccacacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacaactaccattttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcacgatatatttgtctttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53531841 769 + 121039945 aagtgctttccaggcttacaagtccctgtacgatcctgagccttgactatatctctgacaaaatctccaacct-cccattggtcactcctgctctgtcacactagtgtccttgctgttgttttgaaatatagcaagcatg-atttcacttcagtgtctttttccttgttaatttctctgcctgccttgttctgtgtcttgggcattccatatgactcatctcctcattcccctt-agtcctttttccatgtggcattttaatatagaaatcttcactatctaaaattattctcccatatccataacttcttttattgctctacatatccttacagcatttatcattaccatttatcagcttatttgtatttccttactaaaatgtaaactaaatacagacagaa-atttttgtAATTA----aaaaa-----cacataac-aaaaaatctaccatcttaacaaaattttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagaaatctagaa-tgtttttatcttgcttgactgagactccatacctagtgaacagcaactccagattttctgtttcct-ccaggccctgataactaccgttttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcactagatatttgtctttgtgtgtggcttatttcacttagcacaatatccttaagattgatatatgttgag--atatgacagaatttcccttttgaaggctgaataatattccat-t i nomLeu3.chr6 C 0 I 2 s rheMac8.chr7 146184020 760 - 169600520 aagtgcgtttcaggcttacaagtccctgtatgatcctgagccttgactgtatctctgacaaaatctccaacct-cccattgctcactcccgctctgtcacacgagtgtccttgctgttgttttgaaataaag-cagcatg-atttcacttcaatatctttatccttgttattttctctgcctgccttgttctgtgtcttggaaattccatacgactgatctcctcattcccctt-agtcctttttccatgtggcattttaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatgtccttaaagcatttatcactacc----attagcttatttgtctttccttactaaaatgtaaactAA--ACAGACAGAA-ATTTttgtaatta----aaaat------atataac-aaaaaatct-ccatcttaacaaaatgttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagcaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacgactaccattttatcttctgtttccacgtgtttggctactttcaatacctcatataaatggaatcacgagatatttgtttttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147861604 760 - 171882078 aagtgcgtttcaggcttacaagtccctgtatgatcctgagccttgactgtatctctgacaaaatctccaacct-cccattgctcactcctgctctgtcacacgagtgtccttgctgttgttttgaaataaag-cagcatg-atttcacttcaatatctttatccttgttattttctctgcctgccttgttctgtgtcttggaaattccatacgactgatctcctcattcccctt-agtcctttttccatgtggcattttaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatgtccttaaagcatttatcactacc----attagcttatttgtctttccttactaaaatgtaaactaa--acagacagaa-atttttgtAATta----aaaat------atataac-aaaaaatct-ccatcttaacaaaatgttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagcaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacgactaccattttatcttctgtttccacgtgtttggctactttcaatacctcatataaatggaatcacgagatatttgtttttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26934685 760 + 40200012 aagtgcgtttcaggcttacaagtccctgtatgatcctgagccttgactgtatctctgacaaaatctccaacct-cccattgctcactcctgctctgtcacacgagtgtccttgctgttgttttgaaataaag-cagcatg-atttcacttcaatatctttatccttgttattttctctgcctgccttgttctgtgtcttggaaattccatacgactgatctcctcattcccctt-agtcctttttccatgtggcattttaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatgtccttaaagcatttatcactacc----attagcttatttgtctttccttactaaaatgtaaactAA--ACAGACAGAA-ATTTttgtaatta----aaaat------atataac-aaaaaatct-ccatcttaacaaaatgttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagcaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacgactaccattttatcttctgtttccacgtgtttggctactttcaatacctcatataaatggaatcacgagatatttgtttttgtgtctggcttatttcacttaacacaatatccttatgattgatacatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380195 760 - 7633303 aagtgcgtttcaggctaacaagtccctgtatgatcctgagccttgactgtatctctgacaaaatctccaacct-cccattgctcactcctgctctgtcacacgagtgtccttgctgttgttttgaaataaag-cagcatg-atttcacttcaatatctttatccttgttattttctctgcctgccttgttctgtgtcttggaaattccatacaactgatctcctcattcccctt-agtcctttttccatgtggcattttaatgcagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatgtccttaaagcatttatcactacc----attagcttatttgtctttccttactaaaatgtaaactAA--ACAGACAGAA-ATTTttgtaatta----aaaat------atataac-aaaaaatct-ccatcttaacaaaatgttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagcaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacgactaccattttatcttctgtttccacgtgtttggctactttctatacctcatataaatggaatcacgagatatttgtttttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36177402 760 + 58131712 aagtgcgttccaggcttacaagtccctgtatgatcctgagccttgactatatctctgacaaaatctccaacct-cccattgctcactcctgctctgtcacacgagtgtccttgctgttgttttgaaataaag-cagcatg-atttcacttcaatgtttttattcttgttattttctctgcctgccttgttctgtgtcttggaaattccatacgactgatctcctcattcccctt-agtcctttttccatgtggcattttaatacagaaatcttcactatctaaaattatactcccatatccataacctcttttattgctctagatgtccttaaagcatttatcactagc----attagcttatttgtctttccttactaaaatgtaaactaa--acagacagaa-atttttgtAATta----aaaat------atataac-aaaaaatct-ccatcttaacaaaatgttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagcaatctagaa-tgcttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacaactgccattttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcaggagatatttgtttttgtgtctggcttatttcacttagcacaataaccttaagattgatacatgttgaa--atatgacagaatttccctttagaaggctgaataatattccat-t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2571046 760 - 2620224 aagtgcgtttcagacttacaagtccctgtatgatcctgagccttgactgtatctctgacaaaatctccaacct-cccattgctcactcctgctctgtcacacgagtgtccttgctgttgttttgaaataaag-cagcatg-atttcacttcaatatctttatccttgttattttctctgcctgccttgttctgtgtcttggaaattccatacgactgatctcctcattcccctt-agtcctttttccatgtggcattttaatacagaaatcttcactatctaaaattatactcccatatccataacttcttttattgctctagatgtccttaaagcatttatcactacc----attagcttatttgtctttccttactaaaatgtaaactAA--ACAGACAGAA-ATTTttgtaatta----aaaat------atataac-aaaaaatct-ccatcttaacaaaatgttaagtttgcagaacatt-ttgttaatgatatacacattgttgtacagcagcaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgacgactaccattttatcttctgtttccacgtgtttggctactttcaatacctcacataaatggaatcacgagatatttgtttttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--atatgacagaatttcccttttgaaggctgaataatattccat-t i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8400443 766 - 10629787 aagtgcgttccaggcttacaagtccctgtatgatcctgggccttgactatatctctgacaaaatctccaacct-cccattgctcactcctgctctgtcacactagtgtctttgctgttgttttgaaataaag-cagcaag-atttcacttcaatgtctttatccttgttattttctccgcctgccttgttctgtgtcttggaaattccatatgactgatctcctcattccccgt-agtcctttttccatgtggcattttaatacaaaaatcttcactatctaaaattatactcccatatccataacgt-ttttattgctctagatgtccttaaagcatttatcactaccATTTATTAGCTTATTTGTCTTTCCTTACTAAAATGTAAACTAAACACAGGCAGAA-ATTTTTGTAATta----aaaat-----cacataac-aaaaaatct-ccatcttaacaaaattttaagtttgcagaacatt-ttgttaatgatatacacattattgtacagcagaaatctagaa-tgtttttatcttgcttgactgaaactccatacctggtgaacagcaactccagatttcctgtttcct-ccaggccctgatgactaccattttatcttctgttcccatgtgtgtggctactttcaatacctcatataaatggaatcacaagatatttgttcttgtgtctggcttatttcacttagcacaatatccttaagattgatacatgttgaa--atgtgacagaatttcccttttgaaggctgaataatattccat-t i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107985437 730 - 132174527 aagcgtttgctagggttacaagtccctgtatgatcctgagccttgacta--tctctgacaaaatctccaacct-cctatttctcactcctgctctgtcacactagtgtccttactgttgttttgaattatagcaagcatg-atttcacttcagggtctttacccttgttattttctctgcctgccttgttttgtgtcttgggcattccatatgactcatctcctcatccccctt-agtcctttttccgtgtgatattt-aatacagaaaccttcactaactaaaattatactc------ccataactctttttattgctccagatatccttacagcatttatccttaccatttATTAATTTACTTGTCTTTCCTTACTAAAATGT---TTTTATACAGACAGAA-ATTTTTGTCATTA----aaaaa-----cacgtaac-acaaaatctaccatcttaacaaaatgtcacgtgtgcagaacagt-ttgttaatg--atacacattgttgtacagcagcaatctagaa-tgtttttatcttgcttgtctgaaactctatacc------------------------ctctttccc-ccaggccctggcaactaccattttatcttctgtttccatgtgtttggctactttcaataccccatataaatggaatcatgaaatatttgtttttgttactggcttatttcacttagcacaatatccttaagattgatacatgttgga--atatgacagaatttccctattgaaggctgaataatattccat-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10782018 736 + 21366645 aagtgtttgctagggttacaagtccctgtatgatcctgagccttgactgtttctctgacaaaatctccaacct-cctatttctcactcctgctctgtcacactagtgtccttactgttgttttgaaatacagcaagcatg-atttcacttcagggtctttatccttattattttctctgcctgcctttttctgtgtcttgggcattccatatgactcatctcctcattcccctt-agtcctttttccatgtgatattt-aatacagaagtcttcactatctaaaattatactc------ccataactccttttattgctccagatatccttacagcatttatccttaccatttattagtttacttgtctttccttactaaaatataagctaaatacatacagaa-atttttgtcATTA----aaaaa-----cacataac-acaaaatctaccatcttaacaaaatttcaagtgtgcagaacagt-ttgttaatg--atacacattgttgtacagcagcaatctagaattttttttatcttgcttgactgaaactctatacc------------------------ttctttcct-ccaggccctgacaactaccattttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcatgaaatatttgtctttgtcactggcttatttcacttagcacaatatccttaagatcgatacatgttgga--atatgacagaatttccctttcgaaggctgaataatattccat-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9297906 733 + 13033340 aagtgtttgctagggttacaagtccctgtaagatcctgagccttgactgtatctctgacaaaatctccaacct-cctatttctcactcctgctctgtcacactagtgtccttactgttgttttgaaatatagcaagcatg-atttcacttcagggtctttatccttattattttctctgcctgcctttttctgtatcttggacattccatatgactcatctcctcattcccctt-agtcctttttccatgtgatattt-aatacagaaaccttcactgtctaaaattatactc------ctataactccttttattgctccagatatccttacagcatttatccttaccatttattag-ttacttgtctttccttactaaaatgtaagctaagtacagacagaa-atttttgttatta----aaaaa-----cacataac-acaaaatctaccatcgtaacaaaatttcaagtgtgcaaaacagt-ttgttaatg--atacacattgttgcacagcagcaatctagaa-tgtttttatcttgcttgactgaaactctatacc------------------------ctctttcct-ccacgccctggcaactaccattttatcttctgtttccatgtgtttggctactttcaatacctcatataaatggaatcatgaaatatttgtctttgttactggcttatttcacttagcacaatatccttaagattgatacatgttgga--atatgac--aatttcccttttgaaggctgaataatattccatt- i cebCap1.NW_016107324v1 C 0 I 1585 s otoGar3.GL873530 36209321 731 - 36342412 acattcttgctaagcctaccagcctctgcaggaacctgt-------ctacatctctgatgaaacctgcgacct---------------ctactctgtcacactagtgtccttgctgttgttttgaaa------ctgcaagcattccac-------actttatccttcctactttctccctctgctttgctctaagccttgggtg-tccacatgattc--cccctcatt-cctgc-agctctttgcccatgtgacatttgagtgcattaatcatcactatctacatttattctc----atatatgatgtcttctattgctctagatattcttacagtacttattactatgatttattagtttatttgttgtaacccactacagtgtaagctAAAGCCACACCAAATAGTTTTGCAATTA----AAAATAACCCcacttaat-atgaattctaccctctta--aaaattttaagtgtacagaacagt-gtgtcaattatctacacattattgtacaccagaaattgagaa-ctttttcatcttgctaaattgaaactctatacccattaaacatcaacttcccattttctcttccct-ctgggccctggcaacta-cattttgctttctgcttctatgagtttgactacttttggtacctcatataactgggatcgtgacagatttgtccttgtgactggtttacttcactgggcctaat--ccttaagattcatacatgttggagcatatgacacaatttcctttttcaaggcagaataacattccat-t i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26795132 695 - 40214260 aagttcttgccaagcttacaagcctgtacaggatcctgtccctcaactgcctctctgaaaaaatcttcaacctccccattgctcactcctg-tcagtcactctggtgtcattgctgttgttttgaaataagtgaagcatg-attccaattcagggtctttatccttgctgttttctctgcatgccttgctggatgccttgggcgttccacatggcttacttccttactgccctcaagttctttgctcatatgccagtttaacacagaaatatttactcactaaacttgcacac--atatccttagtttcttctcttgctcctaacatccttgcagcatttgtcactatt----atttactacttcatcttttcccactaaaatataagctcaatatggacagat-tttttttttattatggtaagaa------acacagc-atgaaatctaccctcttaaaattat-ttaagtgtaaatgacattattgtcaactatatgcatgttgttgtacagtagatctctagaa-cttatttatctt-cttaattgaaactctgtaaccattgaacaaca---------tttctctctcctgccagcccctggcaaacaacattttactctttgtgtctatgagtttgactaatttagatatttcttgtaagttgaatcatg---------------------------------tagc--------------------------------acataaaaatatttcctttcctaagtctgaataatttttcat-t i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I a score=24893.000000 s hg38.chr14_KI270725v1_random 147737 5 + 172810 ctgtg s panTro5.chr1 126773763 4 + 228573443 -tgtg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10291 1 + 21985 ----g i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532612 5 + 121039945 gtatg i nomLeu3.chr6 I 2 C 0 s rheMac8.chr7 146184780 5 - 169600520 gtgtg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147862364 5 - 171882078 gtgtg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26935445 5 + 40200012 gtgtg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380955 5 - 7633303 gtgtg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36178162 5 + 58131712 gtgtg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2571806 5 - 2620224 gtgtg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8401209 5 - 10629787 gtgtg i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36210052 5 - 36342412 gtgtg i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26795827 5 - 40214260 gtatg i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e saiBol1.JH378136 10782754 0 + 21366645 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986167 0 - 132174527 C e panPan2.chr15 55386348 976 - 99763055 I a score=5005.000000 s hg38.chr14_KI270725v1_random 147742 1 + 172810 t s panTro5.chr1 126773767 1 + 228573443 t i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10292 1 + 21985 t i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532617 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146184785 1 - 169600520 t i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147862369 1 - 171882078 t i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26935450 1 + 40200012 t i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380960 1 - 7633303 t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36178167 1 + 58131712 t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2571811 1 - 2620224 t i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8401214 1 - 10629787 t i colAng1.NW_012121598v1 C 0 I 2073 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782754 0 + 21366645 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986167 0 - 132174527 C e panPan2.chr15 55386348 976 - 99763055 I a score=11939.000000 s hg38.chr14_KI270725v1_random 147743 8 + 172810 -gtgtatgt s panTro5.chr1 126773768 8 + 228573443 -gtgtgtgt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10293 8 + 21985 -gtgtgtgt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532618 8 + 121039945 -gtatatat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146184786 8 - 169600520 -atatgtgt i rheMac8.chr7 C 0 I 2 s macFas5.chr7 147862370 8 - 171882078 -atatgtgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26935451 8 + 40200012 -atatgtgt i macNem1.NW_012010577v1 C 0 I 2 s cerAty1.NW_012000887v1 4380961 6 - 7633303 -atatgt-- i cerAty1.NW_012000887v1 C 0 I 2 s chlSab2.chr26 36178168 8 + 58131712 -gtgtgtgt i chlSab2.chr26 C 0 I 2 s manLeu1.NW_012108674v1 2571812 8 - 2620224 -atatgtgt i manLeu1.NW_012108674v1 C 0 I 2 s calJac3.chr10 107986167 7 - 132174527 cacacac-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10782754 7 + 21366645 tgcatat-- i saiBol1.JH378136 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e panPan2.chr15 55386348 976 - 99763055 I a score=-7475.000000 s hg38.chr14_KI270725v1_random 147751 4 + 172810 atat-- s panTro5.chr1 126773776 2 + 228573443 at---- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10301 2 + 21985 at---- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532626 2 + 121039945 at---- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146184796 2 - 169600520 gt---- i rheMac8.chr7 I 2 C 0 s macNem1.NW_012010577v1 26935461 2 + 40200012 gt---- i macNem1.NW_012010577v1 I 2 C 0 s cerAty1.NW_012000887v1 4380969 2 - 7633303 gt---- i cerAty1.NW_012000887v1 I 2 C 0 s chlSab2.chr26 36178178 2 + 58131712 at---- i chlSab2.chr26 I 2 C 0 s manLeu1.NW_012108674v1 2571822 2 - 2620224 gt---- i manLeu1.NW_012108674v1 I 2 C 0 s calJac3.chr10 107986174 4 - 132174527 ac--ac i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10782761 4 + 21366645 at--aa i saiBol1.JH378136 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e macFas5.chr7 147862378 0 - 171882078 C e panPan2.chr15 55386348 976 - 99763055 I a score=5335.000000 s hg38.chr14_KI270725v1_random 147755 3 + 172810 ata s rheMac8.chr7 146184798 3 - 169600520 ata i rheMac8.chr7 C 0 C 0 s macNem1.NW_012010577v1 26935463 3 + 40200012 ata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4380971 3 - 7633303 ata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36178180 3 + 58131712 ata i chlSab2.chr26 C 0 I 989 s manLeu1.NW_012108674v1 2571824 3 - 2620224 ata i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107986178 3 - 132174527 aca i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10782765 3 + 21366645 gca i saiBol1.JH378136 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e gorGor5.CYUI01005903v1 10303 0 + 21985 C e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e macFas5.chr7 147862378 0 - 171882078 C e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I e panTro5.chr1 126773778 0 + 228573443 C a score=10682.000000 s hg38.chr14_KI270725v1_random 147758 13 + 172810 cacatAAatatac s rheMac8.chr7 146184801 13 - 169600520 tatataaatatac i rheMac8.chr7 C 0 I 1057 s macNem1.NW_012010577v1 26935466 13 + 40200012 tatataaatatac i macNem1.NW_012010577v1 C 0 I 1058 s cerAty1.NW_012000887v1 4380974 13 - 7633303 tatataaatatac i cerAty1.NW_012000887v1 C 0 I 989 s manLeu1.NW_012108674v1 2571827 13 - 2620224 tatataaatatac i manLeu1.NW_012108674v1 C 0 I 989 s calJac3.chr10 107986181 8 - 132174527 cacacaca----- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10782768 13 + 21366645 cacacacattttc i saiBol1.JH378136 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e gorGor5.CYUI01005903v1 10303 0 + 21985 C e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e chlSab2.chr26 36178183 989 + 58131712 I e macFas5.chr7 147862378 0 - 171882078 C e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I e panTro5.chr1 126773778 0 + 228573443 C a score=1.000000 s hg38.chr14_KI270725v1_random 147771 7 + 172810 catatat-- s panTro5.chr1 126773778 6 + 228573443 -atatat-- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10303 6 + 21985 -atatat-- i gorGor5.CYUI01005903v1 C 0 C 0 s saiBol1.JH378136 10782781 7 + 21366645 --tttatct i saiBol1.JH378136 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5811562 930 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986189 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147862378 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=3784.000000 s hg38.chr14_KI270725v1_random 147778 5 + 172810 ataca s panTro5.chr1 126773784 5 + 228573443 ataca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10309 5 + 21985 ataca i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5812492 5 + 72422247 ataca i ponAbe2.chrUn I 930 C 0 s saiBol1.JH378136 10782788 5 + 21366645 attca i saiBol1.JH378136 C 0 I 923 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986189 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147862378 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=1755.000000 s hg38.chr14_KI270725v1_random 147783 6 + 172810 c-catac s panTro5.chr1 126773789 6 + 228573443 c-catac i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10314 7 + 21985 cacatat i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5812497 6 + 72422247 c-catac i ponAbe2.chrUn C 0 I 90 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986189 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147862378 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=-2006.000000 s hg38.chr14_KI270725v1_random 147789 41 + 172810 -atatatatgccatactatatttatcatacatatatatatac s panTro5.chr1 126773795 9 + 228573443 ---------------------------------tatatatat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10321 15 + 21985 -atataca-------------------------tatatata- i gorGor5.CYUI01005903v1 C 0 C 0 s calJac3.chr10 107986189 17 - 132174527 cacacaca-------------------------cacacaaac i calJac3.chr10 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812503 90 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147862378 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=9179.000000 s hg38.chr14_KI270725v1_random 147830 33 + 172810 accatacatatatataccatac-atatatatacc s panTro5.chr1 126773804 24 + 228573443 accatacgtatat----------atgtatacact i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10336 34 + 21985 accatacatatatataccatactatatatatacc i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5812593 33 + 72422247 accatatatatatacaccatat-atatatacacc i ponAbe2.chrUn I 90 C 0 s calJac3.chr10 107986206 16 - 132174527 -acacacatatatatgc----------------- i calJac3.chr10 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147862378 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53532628 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=2917.000000 s hg38.chr14_KI270725v1_random 147863 4 + 172810 atac s panTro5.chr1 126773828 4 + 228573443 atat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10370 4 + 21985 atac i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5812626 4 + 72422247 atat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr6 53532628 4 + 121039945 atat i nomLeu3.chr6 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986222 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147862378 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=14504.000000 s hg38.chr14_KI270725v1_random 147867 28 + 172810 atatatata-------tatatata---tatatataCAC s panTro5.chr1 126773832 28 + 228573443 atatatata-------tatatata---tatatatatat i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10374 26 + 21985 atatatata--------acatata---tatatata-at i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5812630 38 + 72422247 atatatatacaccatatatatatacactatatatatat i ponAbe2.chrUn C 0 I 1910 s nomLeu3.chr6 53532632 28 + 121039945 atatatata-------tatatata---tatatacacac i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147862378 28 - 171882078 gtgtatata-------tataaata---tacatatacat i macFas5.chr7 C 0 C 0 s calJac3.chr10 107986222 4 - 132174527 ----------------------------------acac i calJac3.chr10 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=133.000000 s hg38.chr14_KI270725v1_random 147895 9 + 172810 ACACACACA s panTro5.chr1 126773860 6 + 228573443 aaacac--- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10400 6 + 21985 atatat--- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532660 9 + 121039945 acacacaca i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147862406 9 - 171882078 atatatgta i macFas5.chr7 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26795832 0 - 40214260 C e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210057 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107986226 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=198052.000000 s hg38.chr14_KI270725v1_random 147904 147 + 172810 tatataccatattttcttcatctgttcatttgatgatggacttttagattgtttctactttttggctattgtgaataattctgtaat-gaatatgggaatgcaaata----tcacttcaagatcttgttttca-------attattttggaa-----------ttattca s panTro5.chr1 126773866 142 + 228573443 -----accatattttctttatctgttcatttgatgatggacttttagattgtttctactttttggctattgtgaataattctgtaat-gaatatgggaatgcaaata----tcacttcaagatcttgctttca-------attattttggaa-----------ttattca i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10406 140 + 21985 -----accatattttctt-atctgttcatttgatg-tggacttttagattgtttctactttttggctattgtgaataattctgtaat-gaatatgggaatgcaaata----tcacttcaagatcttgttttca-------attattttggaa-----------ttattca i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532669 128 + 121039945 cacacaccatattgtctttatctgttcatttgatgatggacatttagattgtttctactttttggctattgtgaataattctgcaat-gaacatgggaatgcaaata----tcacttcaagatcttgtt-------------------------------------ttca i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147862415 126 - 171882078 tatataccatattttctttatctgtttatttgatgatggacatttagattgtttctactttttggctattgtgaataattctgcaa--aaacat-ggaatgcaaata----taacttcaagatcttgtt-------------------------------------ttca i macFas5.chr7 C 0 C 0 s calJac3.chr10 107986226 125 - 132174527 ---acaccctattttctttatctattcatttgatgatggacatctaagttatttatactttttggctattgtgaataattttgcaat-gagtgttggaatgcaaata----tcactttaagattttgct-------------------------------------ttca i calJac3.chr10 C 0 C 0 s otoGar3.GL873530 36210057 128 - 36342412 tatataacagatttttcttatctattcatctaatgatgaatttttatgttgttttcacctttctgctaatgtgattaatgcctcaatggaatat-agagtacaaata----tcacctcaagattctgtt-------------------------------------taca i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26795832 169 - 40214260 aatataacacattttctttatccattcatctgttaatggacatttagattgtttctatcccttggctattgtgaataatgcagcaat-gaacatgggagtgcaaatgctgtttggttggagtttttatttttatttttttatttttttaaagattttatttgtttattca i canFam3.chr30 C 0 I 168 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e saiBol1.JH378136 10782793 923 + 21366645 I e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=65602.000000 s hg38.chr14_KI270725v1_random 148051 32 + 172810 attattttggaaaaatgcccacaagtgggatt s panTro5.chr1 126774008 32 + 228573443 attattttggaaaaatgcccacaagtgggatt i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10546 32 + 21985 attattttggaaaaatgcccacaagtgggatt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532797 32 + 121039945 attattttggaaaaatgcccacaagtgggatt i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147862541 32 - 171882078 attattttggaaaaatgcccacaagtgggatt i macFas5.chr7 C 0 C 0 s calJac3.chr10 107986351 30 - 132174527 attgttttggaaaaa--cccacaagtgggatt i calJac3.chr10 C 0 C 0 s otoGar3.GL873530 36210185 32 - 36342412 attattttggataaatacccccaaattggagt i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26796169 32 - 40214260 aatactttggataaatactcacaggtgggatt i canFam3.chr30 I 168 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e saiBol1.JH378136 10782793 923 + 21366645 I e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=1148984.000000 s hg38.chr14_KI270725v1_random 148083 794 + 172810 gctgcatcatatggtaggtctattttttaatgttttgaggaccctccatactgttttccatagtggctctaccattttacattcctactgacagtacataaggttctaattcaatttctccacatcttcatcaacacttgctattt-tcttttttttaaaatggtcat----acagttatgaggtgataaatcccgttgtgattttaattagcatttccctgatgattaatgatgttgagtatctttttatatccctgttggtcatttgcatgtcttcctgaaaaatatctatttaagaatttggccattttaaaattgggttatgtgtttatt--tgcttttgagt-----------tctaggtgttt---------------------cttatatattttggatattaagcccttagcacatatacggttttcaaatattttctccaattctataggctgcctgttcactctgtt----gtttccttttttgcacagaagcattttatcttgatgtaatcaccctaacctatttttgcttttgttgcctgtgcttttggtatcaaatccaaggaattattgccacgaccaatgtgataaagcctttctttatgttttcttgt---agttttacagctttagttcttacatttaagtcttcaatccatttggagttaacatttgtgaacagttttaagataacggttcactttcattcttttgcatatggatatccagttttcccaacaatatttgttgaagaaattatcctttctccattgtatagttttggcaccctcgtcaaagatcatttgactatatgcatgtgggtttatttc s panTro5.chr1 126774040 796 + 228573443 gctgcatcatatggtaggtctactttttaatgttttgaggaccctccatactgttttccatagtggctctaccattttacattcctactgacagtacgtaaggttctaattcaatttctccacatcttcatcaacacttgctattt-tctttttttcaaaatggtcat----acagttatgaggtgataaatcctgtagtgattttaattaacatttccctaatgattaatgatgttgagtatatttttatatccctgttggtcatttgcatgtcttcctgaaaaatatctatttaagaatttggccattttaaaattgagttatgtgtttatt--tgcttttgagt-----------tataggtgttt---------------------cttatatattttggatattaagcccttaacacatatacggttttcaaataatttctccagttctataggctgcctgttcactctgtt----gtttccttttttgcacagaagcattttaccttgatgtaatcaccctaacctatttttgctttcgttgcctgtgcttttggtgtcaaatccaaggaattattgccacgaccaatgtgataaaggctttctttatgttttcttgtaggagttttacagcttttgttattacatttaagtcttcaatccatttggagttaacatttgtgaatag-tgtaagataagggttcactttcattcttttgcatatgaatatccagttttcccaacaatatttgttgaagaaattatcctttctccattgtatagttttggcaccctcgtcaaagatcatttgactatatgcatgtgggtttatttc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 10578 794 + 21985 gctgcatcctatggtaggtctattttttaatgttttgaggaccctccatactgttttccatagtggctctaccattttacattcctactgacagtacataaggttctaattcaatttctccacatcttcatcaacacttgctattt-tctttttttaaaaatggtcat----acagttatgaggtgataaatcctgttgtgattttaattagcatttccctgatgattaatgatgttgagtatctttttatatccctgttggtcatttgcatgtcttcctgaaaaatatctatttaagaatttggccatttt-aaattgggttatgtgtttatt--tgcttttgagt-----------tataggtgttt---------------------cttatatattttggatattaagcccttagcacatatacggttttcaaatattttctccaattctataggctgcctgttcactctgtt----gtttccttttttgcacagaagcattttatcttgatgtaatcaccctaacctatttttgctttggttgcctgtgcttttggtgtcaaatccaaggaattattgccacgaccaatgtgataaagcctttctttatgttttcttgtag-gattttacagctttagttcttacatttaagtcttcaatccatttggagttaacatttgtgaacag-tgtaagataagggttcactttcattcttttgcatatggatatccagttttcccaacaatatttgttgaagaaattatcctttctccattgtatagttttggcaccctcgtcaaagatcatttgactatatgcatgtgggtttatttc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53532829 796 + 121039945 gctgcatcatatggtaggtctattttttaatgttttgaggaccctccatactgttttccataatgactctatcattttacattcctactgacggtacatagggttccaattcaatttctccacatcttcatcaatacttgctattt-tctttttttaaaaatggtcat----acagttatgaggtgataaatcctattgtgattttaattagcatttccctgatgattaatgatgttgagtatcttttcatatccctattggtcatttgcatgtcttcctgaaaaatatctatttaagaacttggacatttttaaattgggttatttgtttatt--tgcttttgagt-----------tataggtgttt---------------------cttatatattttggatattaagccctcagcacatatatggttttcaaatattttctccaattctgtaggctgcctgttcactctgtt----gtttccttttttgcacagaagcattttatcttgatgtaatcactctaacctatttttgctttggttgcctgtgcttttggtgtcaaatccaaggaattattgccacgaccaatgggataaagcctttctttatgttttcttgtaggagttttacagctttaggtcttacatttaagtcttcaatccatttggagttaacatttgtgaacag-tgtaagataagggttccctttcattcttttgtatatggatatccagttttcccaacaatatttgttaaaaaaaatatcctttctccatcgtatagttttggcaccctcatcaaagatcatttgactatatgcatgtgggtttatttc i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147862573 795 - 171882078 gctgcatcatatggtaggtctatttttcaatcttttgaggaccctccgtactgttttccatagtggctctaccattttacattcctactgacagtacatagtgttccaattcaatttcttcacatcttcatcaacacttgctattt-ttattttttt-aagtggtcat----acagttatgaggtgataaatcctattgtgattttaattggaatttccctgatgattaatgatgttgagtatcttttcatatccctgttggtcatttgcatgtcttcctgcaaaatatctatttaagaacttggccatttttaaattgggttatttatttatt--tgcttttgagt-----------tataggtgttt---------------------cttatatattttggatattaagcccttagcacatatatggttttcaaatattttctccaattctgtaggctgcctgttcactcagtt----gtttcctttattgcacagaagcattttatctcgacgtaatcactctaacctatttttgctttggttgcctgtgcttttggtgtcaaatccaaggaattattgccacgactaatgggataaagcctttctttatgttttcttgtaggagttttacagctttaggccttacatttaagtctttaatccatttggagttagcatttttgaacag-tgtaagataagggttcgctttcattctttggcatatgtatatccagttttctcaacaatatttgttgaagaaattatcctttctccattgtgcagttttggcaccctcatcaaagatcatttgactatatgcttgtgggtttacttc i macFas5.chr7 C 0 C 0 s calJac3.chr10 107986381 775 - 132174527 gctgca------------tctattttttaatgttttgagaaccctccatgatgttttccatagtgactgtaccattttacattcctactgacagtacacaggattccaattcaacttttccacttcttcatcaacac------att-atttttttaaataacgcttat----gcagttatgaggtgataaatgctattgtgattttaatcagcatttccctgatgattaataatgttgagtatcttttcatatacctgttggtcatttgtatgtcttcctgaaaaatgcctatttaagaa-ttggacattttaaaattggatt-tttttttctt--tgcttctgagt-----------tacaggtattt---------------------cttatatattttagatattatacccttatcacatatatggttttcaaataacttctccaattctgtaggctgcctgttcactctatt-----tactttttattgcccagaagcattttatcttgatgtaatccctctaacctatttttgctttggttgcctgtgcttttggtatcaaatccaaggaattattgccaaggccaatgtgataaagcctttctttatgttttctttcaggagttttacagttttaggtcttacatttaagtctttaatccatttggagttaacatttgtgaccag-tgtaagataagggttcactttcattcttttgcatatggatatccagttttcccaaaacaatttgctgaagaaactatcctttctccattgtgtagtctttgcactctcatcaaagatcatttgaccaaaagcatgtgggtttatttc i calJac3.chr10 C 0 C 0 s canFam3.chr30 26796201 819 - 40214260 gtgggatcagatattatttctgctttt-aatttttgtaggaacctccatactgttttccatagctgctgtgccattttacattcccaccaacagtgcacaagggttccact---tttgtctacattcttactaatatttattttctgttttttttttataatgtccatcctaacaggtgtgatata--aaatctcattgtggttttgatttgcatttccctgatgattagtgatggtgagcatttttaaatgtatctg-tggctgtttgtatgtctt--ggagaaatgactattcaagtattt-ctcatgtttaaattg-attatgtgtgtatgcatgcatgtatgtatgtatgtatatatatgtattttataaactgagtttgcagttctttatatactttgaatattcaccccttgtcatatatgtgggttgcaaatattttcttatattccagaggttgcctttttactttgttgattgttttctttattgtacagtaaccttttattttgatgtggtc-cttttgtctgtttttgtttt-gttgtttgtgcttttgatgttatatccaagaaatctttgccacaaccaatgctatgaagttttttgct-tgttttcttctagaagttttatagttttaggtcccatgtttaagtctttattccattttaaattgatttttatgtatgg-t-----ataagggtccaatttcattcttctgcatttggatgt-agtttttctcaacatgttttgttgaaaaaactatcctttctccattatgtagtcttggaaccctcatcaaagatcagttggccatatatgaatgggtttatttc i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=2128.000000 s hg38.chr14_KI270725v1_random 148877 18 + 172810 tgggcttgct----ttctttcc s panTro5.chr1 126774836 14 + 228573443 tgggcctgct----ttct---- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 11372 14 + 21985 tgggctttct----ttct---- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533625 14 + 121039945 tgggctttct----ttct---- i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147863368 9 - 171882078 tgggctttt------------- i macFas5.chr7 C 0 C 0 s canFam3.chr30 26797020 18 - 40214260 tcgactctattcagttcc---- i canFam3.chr30 C 0 I 3028 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=-1018.000000 s hg38.chr14_KI270725v1_random 148895 90 + 172810 ttccttccttccttccttccttccttccttccttccttccttccttctttctttctttctt-tctttctttctttctttctttctttcttt s panTro5.chr1 126774850 35 + 228573443 --------------------------------------------ttctttctttctttctt-tctttctttctttctttc----------- i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 11386 46 + 21985 --------------------------------------------ttctttctttcttttttctttctttttttttctttctttctttttt- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533639 9 + 121039945 --------------------------------------------ctttttttt-------------------------------------- i nomLeu3.chr6 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140781616 10238 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e macFas5.chr7 147863377 0 - 171882078 C e rheMac8.chr7 146184814 1057 - 169600520 I e panPan2.chr15 55386348 976 - 99763055 I a score=429.000000 s hg38.chr14_KI270725v1_random 148985 4 + 172810 ctta s macFas5.chr7 147863377 4 - 171882078 tttt i macFas5.chr7 C 0 C 0 s papAnu3.chr9 113831729 4 + 125196307 cttt i papAnu3.chr9 n 10238 n 10238 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e gorGor5.CYUI01005903v1 11432 0 + 21985 C e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53533648 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I e panTro5.chr1 126774885 0 + 228573443 C a score=1705.000000 s hg38.chr14_KI270725v1_random 148989 4 + 172810 tttc s panTro5.chr1 126774885 4 + 228573443 tttc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 11432 4 + 21985 tttt i gorGor5.CYUI01005903v1 C 0 C 0 s macFas5.chr7 147863381 4 - 171882078 tttt i macFas5.chr7 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e chlSab2.chr26 36178183 989 + 58131712 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53533648 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=161.000000 s hg38.chr14_KI270725v1_random 148993 4 + 172810 -tttc s panTro5.chr1 126774889 4 + 228573443 -tttc i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 11436 3 + 21985 -ttt- i gorGor5.CYUI01005903v1 C 0 C 0 s macFas5.chr7 147863385 4 - 171882078 tttt- i macFas5.chr7 C 0 C 0 s chlSab2.chr26 36179172 4 + 58131712 tttt- i chlSab2.chr26 I 989 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I e nomLeu3.chr6 53533648 0 + 121039945 C e panPan2.chr15 55386348 976 - 99763055 I a score=6912.000000 s hg38.chr14_KI270725v1_random 148997 4 + 172810 tttc s panTro5.chr1 126774893 4 + 228573443 tttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55387324 4 - 99763055 tttt i panPan2.chr15 I 976 C 0 s gorGor5.CYUI01005903v1 11439 4 + 21985 tttt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533648 4 + 121039945 tttt i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147863389 4 - 171882078 tttt i macFas5.chr7 C 0 C 0 s chlSab2.chr26 36179176 4 + 58131712 tttt i chlSab2.chr26 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e manLeu1.NW_012108674v1 2571840 989 - 2620224 I e cerAty1.NW_012000887v1 4380987 989 - 7633303 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I a score=150263.000000 s hg38.chr14_KI270725v1_random 149001 56 + 172810 tttttgagatggagtcttgctctgtaaccaaggcgggagtgcagtggtgtgatctt s panTro5.chr1 126774897 56 + 228573443 tttttgagatggagtcttgctctgtaaccaaggcgggagtgcagtggtgtgatctt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55387328 55 - 99763055 tttttgagatgaagtcttgttct-tcacccaggtgggagtgcagtggtgtgatctt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 11443 55 + 21985 tttttgagatggagtcttgctctgtaacc-aggcgggagtgcagtggtgtgatctt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533652 56 + 121039945 tttttgagatgaagtcttgctctgtcacccaggtgggagtgcagtggtgtgatctc i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147863393 56 - 171882078 ttttggagatggagttttgctcagtcacccaggtgggagtgcagtggtgccatttc i macFas5.chr7 C 0 C 0 s cerAty1.NW_012000887v1 4381976 56 - 7633303 tttttgagatggagttttgctcagtcacccaggcgggagtccggtggtgccatctc i cerAty1.NW_012000887v1 I 989 C 0 s chlSab2.chr26 36179180 56 + 58131712 tttttgagatggagttttgctcagtcacccaggcgggagtgcggtggtgccatctc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2572829 56 - 2620224 tttttgagatggagttttgctcagtcacccaggcgggagtgcagtggtgccatctc i manLeu1.NW_012108674v1 I 989 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e macNem1.NW_012010577v1 26935479 1058 + 40200012 I e rheMac8.chr7 146184814 1057 - 169600520 I a score=61278.000000 s hg38.chr14_KI270725v1_random 149057 21 + 172810 ggctcactgcaacctcttcct s panTro5.chr1 126774953 21 + 228573443 ggctcactgcaacctcttcct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55387383 21 - 99763055 ggctcactgcaacctcttcct i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 11498 21 + 21985 ggctcactgcaacctcttcct i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533708 21 + 121039945 ggctcactgcaacctcttcct i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147863449 6 - 171882078 ggctc---------------a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26936537 21 + 40200012 ggctcactgcaacctcttcga i macNem1.NW_012010577v1 I 1058 C 0 s cerAty1.NW_012000887v1 4382032 21 - 7633303 ggctcactgcaacctcttcgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36179236 21 + 58131712 ggctcactgcaacctcttcga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2572885 21 - 2620224 ggctcactgcaacctcttcgt i manLeu1.NW_012108674v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e rheMac8.chr7 146184814 1057 - 169600520 I a score=795201.000000 s hg38.chr14_KI270725v1_random 149078 173 + 172810 cctgggttcaagcgattctcctacctcagcctcccaagtagctggaattacaggtgcccataaccatgcccagctaatttttgtattttttcatagagacggggtttcaccatgttagccaggctggtcttgaactcccgaccttaggtgatctgcccgccttggcctcccag s panTro5.chr1 126774974 173 + 228573443 cctgggttcaagcgattctcctacctcagcctcctgagtagctggaattacaggtgcccataaccatgcccagctaatttttgtattttttcatagagacggggtttcaccatgttagccaggctggttttgaactcctgaccttaggtgatctgcccgccttggcctcccag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55387404 173 - 99763055 tctgggttcaagtgattctcctacctcagccccccgagtagctgggattacaggtgtccacaaccatgcccagctaatttttgtattttttcacagagacggggtttcaccatgttagccaggctggtcttgaactcctgaccttaggtgatccacccaccttggcctcccaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 11519 173 + 21985 cctgggttcaagcgattctcctacctcagcctcccgagtagctggaattacaggtgcccataaccatgcccagctaatttttgtattttttcatagagacggggtttcaccatgttagccaggctggtcttgaactcccgaccttaggtgatctgcccgccttggcctcccag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533729 173 + 121039945 cctgggttcaagcgattctcccacctcagccttccaagtagctgggattacaggcacccacaaccacacccagctaatttttgtattttttcacagagatggggtttcaccatgttagccaggcaggtcttgaactcctgaccttaggtgatccacccgccttggcctcccaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146185871 173 - 169600520 cctgggttcaagcgattatcctacctcagcctcctgagtagctgagattacaggcacccaccaccacaccaagctaatttctgtattttttcatagagatggggtttcaccatgttagccatgctggtcttgaactgctgaccttaggtgatccacccgcctcggcctcccaa i rheMac8.chr7 I 1057 C 0 s macFas5.chr7 147863455 173 - 171882078 cctgggttcaagcgattatcctacctcagcctcctgagtagctgagattacaggcacccaccaccacaccaagctaatttctgtattttttcatagagatggggtttcaccatgttagccatgctggtcttgaactgctgaccttaggtgatccacccgcctcggcctcccaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26936558 173 + 40200012 cctgggttcaagcgattatcctacctcagcctcctgagtagctgagattacaggcacccaccaccacaccaagctaatttctgtattttttcatagagatggggtttcaccatgttagccatgctggtcttgaactgctgaccttaggtgatccacccgcctcggcctcccaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4382053 173 - 7633303 cctgggttcaagcgattctcctacctcagcctcctgagtagctgggattacaggcacccaccaccacacccagctaatttttgtattttgtcatagagacagggtttcaccatgttagccaggctggtcttgaactcctgaccttaggtgatccacccgcctcagcctcccaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36179257 173 + 58131712 cctgggttcaagcgattctcctacctcagcctcctgagtagctgagattacaggcacccaccaccacaccaagctaatttctgtattttttcatagagatggggtttcaccatgttagccaggctggtcttgaactgctgaccttaggtgatccacccgcctaggcctcccaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2572906 172 - 2620224 cctgggttcaagcgattctcctacttcagcctcctgagtagctgggattacaggcacccaccactaca-tgagctaatttttgtattttttcatagagacagggtttcaccatgttagccaggctggtcttgaactcctgaccttaggtgatccacctgcctcagcctcccaa i manLeu1.NW_012108674v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e saiBol1.JH378136 10782793 923 + 21366645 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6377489 1464 - 11604778 I e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e calJac3.chr10 107987156 0 - 132174527 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=3376419.000000 s hg38.chr14_KI270725v1_random 149251 503 + 172810 tgggctttctattctgttccaataatccattctgttccattcatctatatgattagttttacattaatatcacactattgcgattgctgtagctttgtagtatatttcaaagtcagaaaatgtgaggcctctaac--tgtttctctttcttaggattgttttggatattcagggtccgttgtggttccatatggattttagaattgtcctttctatttctctaaaattatcattggaatttatacaattccaagggattacatcaaatctgtaaatttctttggctagtattagaatttaaaaatattctttgaattcacaaaaatgagatggctttccatttatttgtgtcttccttaatttctttcagcaatattttgcagtattcagtgtacaagtctt------------tcccccaccggctaagtttattccaaagtattttattcagtttgatgccatt----gcaaatggattgttttcttaatttcc-ttttcagaatgtttgctgtttgtgt s panTro5.chr1 126775147 501 + 228573443 tgggctttctattctgttccactaatccattctgttccattcatctatatgattagttttacgttaatatcacactattgggattgctgtagatttgtagtatatttcaaagtcagaaaatgtgaggcctctaag--tgtttctctttctaaggatt-tttttgatattcagggtccgttgtgg-cccatatggattttagaactgtcctttctatttctctaaaattatcattggaatttatacaattccaagggattacattaaatctgtaaattgctttggctagtattagaatttaaaaatattctttcaattcatggaaatgagatggcttttcatttacttgtgtcttccttaacttctttcaacaatactttgcagtattcagtgtacaattctt------------tcccccactggctaagtttattccaaagtattttattcattttgatgccatt----gtaaatggattattttcttaatttcc-ttttcagaatgtttgctgtttgtgt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55387577 513 - 99763055 tggactttctattctgttccactaatctattctgttccattcatctatatgaccaattttatgttaatatgacactattgggattgctgtagctttgtagtacattgcaaagtcagaaaatgtgaggcctctaactttgttttcctttcttaggattgttttggatattcagggtctgttgtgtttccatatggattttagaattgtcctttctatttctctaaaattatcattggaatttttat--------gggattacatcaaatctgtaaattgctttggctagtattagaattcaaaaatattctttcaattcattaaaatgagatgtgtttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtttataagtctcccgtgctccccgccccccactggctaagtatattcctaattattttattcattttgatgccattacaagcaaatggattgctttcttaatttcc-ttttcataatgttcgctgtttgtgt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 11692 495 + 21985 tgggctttctattctgttccactaatccattctgttccattcatctatatgattagttttacattaatatcacactattgggattgctgtagctttgtagtatatttcaaagtcagaaaatgtgaggcctctaac--tgtttctctttcttaggattgttttggatattcagggtccgttgtggttccatatggattttagaattgtcctttctatttctctaaaattagcattggaatttttat-------agggattacatcaaatctgtaaattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatggctttccatttacttgtgtcttccttaatttctttcagcaatattttgcagtattcagtgtacaagtctt------------tcccccaccggctaagt-tattccaaagtattttattcattttgatgccatt----gcaaatggattgttttcttaatttcc-ttttcagaatgtttgctgtttgtgt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53533902 510 + 121039945 tggactttctattctgttccactaatctattctgttccattcatctatatgattaattttatgttaatatgacactattgggattgctgtagctttgtagtacatttcaaagtcagaaaatgtgaggcctctaactttgtttttctttcttaggattgttttggatattcagggtccgttgtggttttatatggattttagaattgtcctttctatttctctaaaattatcattggaatttttat--------gggattacatcaaatctgtaaattgctttggctagtattagaatttaaaaatattctttcaattcat-aaaatgagatgtctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtctcctgcgccccc--ctccccaccggctaagtatattcctaattattttattcattttgatgccattgcaagcaaacggattgctttcttaatttcc-ttttcagaatgttcgctatttgtgt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146186044 469 - 169600520 tgggctttctattctg------------------ttccattcatctatatgacgaattttatgttaa--------tattgggattgctgcagctttgtagtatatttcagagccagaaaatgtgaggcctctagctttgtttttctttcttaggattgttttggatattcagggtccactgtggttccatatggattttagaattgtcttttctatttctgtaaaattatcattggaatttttat-------agggattacatcaaatctgtacattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatatctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctggctgagtttattcctaagtattttattcattttgatgctatt----gcaaatggattgctttcttattttcctttttcagaatgtttgctgt-----g i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147863628 469 - 171882078 tgggctttctattctg------------------ttccattcatctatatgacgaattttatgttaa--------tattgggattgctgcagctttgtagtatatttcagagccagaaaatgtgaggcctctaactttgtttttctttcttaggattgttttggatattcagggtccactgtggttccatatggattttagaattgtcttttctatttctgtaaaattatcattggaatttttat-------agggattacatcaaatctgtacattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatatctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctggctaagtttattcctaagtattttattcattttgatgctatt----gcaaatggattgctttcttattttcctttttcagaatgtttgctgt-----g i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26936731 469 + 40200012 tgggctttctattctg------------------ttccattcatctatatgacgaattttatgttaa--------tattgggattgctgcagctttgtagtatatttcagagccagaaaatgtgaggcctctagctttgtttttctttcttaggattgttttggatattcagggtccactgtggttccatatggattttagaattgtcttttctatttctgtaaaattatcattggaatttttat-------agggattacatcaaatctgtacattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatatctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctggctaagtttattcctaagtattttattcattttgatgctatt----gcaaatggattgctttcttattttcctttttcagaatgtttgctgt-----g i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4382226 469 - 7633303 tgggcttcctattctg------------------ttccattcatctatatgactaattttatgttaa--------tattgggattgctgcagctttgtagtatatttcaaagccagaaaatgtgaggcctctaactttgtttttctttcttaggattgttttggatattcagggtccactgtggttccatatggattttagaattgtcttttctatttctgtaaaatcatcattggaagttttat-------agggattacatcaaatctgtacattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatacctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctggctaagtttattcctaagtattttattcattttgatgctatt----gcaaatggattgctttcttattttcctttttcagaatgtttgctgt-----g i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36179430 469 + 58131712 tgggctttctattctg------------------ttccattcatctatatgacgaattttatgttaa--------tattgggattgctgcagctttgtagtatatttcaaagccagaaaatgtgaggcctctaactttgtttttctttcttaggattgttttggatattcagggtccactgtggttccatatggattttagaattgtcttttctatttctgtaaaattatcattggaatttttat-------agggattacatcaaatctgtacattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatacctttccatttacttgtgtcttccttaattcctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctggctaagtttattcctaagtattttattcattttgatgctatt----gcaaatggatggctttcttattttcctttttcagaatgtttgcggt-----g i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2573078 468 - 2620224 tgggctttctattctg-------------------tccattcatctatatgactaattttatgttaa--------tattgggattgctgcagctttgtagtatatttcaaagccagaaaatgtgaggcctctaactttgtttttctttcttaggattgttttggatattcagggtccactgtggttccatatggattttagaattgtcttttctatttctgtaaaatcatcattggaagttttat-------agggattacatcaaatctgtacattgctttggctagtattagaatttaaaaatattctttcaattcatgaaaatgagatacctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctggctaagtttattcctaagtattttattcattttgatgctatt----gcaaatggattgctttcttattttcctttttcagaatgtttgctgt-----g i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107987156 493 - 132174527 tgggctttctattctgatccactggtctattctgttccattcatctatatgaataattttatgttaatatcacacaattgggattgctgtagctttgtaatatatttcaaaatcagaatatgtgagacctctaactttgtttttctttcttaggattgttttggacattcagggtcccttgttgttccatatgaattttagaactgtcttttttatttctgtaaaattatcattgaaatttttat-------agggattatatcaaacctgtaaattgcattggctagtattagaatttaaaaatattctttcaatccatgaaaaggggatgtctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctaa----gtttattcctaagtattttattcattttgatgccatt----gcaaatggattgctttcttgatttcc-ttttcagaatgtttgctgtt--tgt i calJac3.chr10 C 0 I 18 s saiBol1.JH378136 10783716 498 + 21366645 tgggctttctattctgatccactagtctattatgttccattcatctatatgactaattttatgttaatatcacacaattgggattgctgtagctttgtaatatatttc-aagtcagaatatgtgagatctctaactttgtttttctttcttaggattgttttggacattcagggtcccttgttgttccatatgaattttagaactgtcttttctatttctgtaaaattatcattggaatttttct-------agggattatatcaaacctgtaaattgctttgactagtattagaatttaaaaatattctttcaatccatgaaaatgggatgtctttccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------ctcctccctgactatgtttattcctaagtattttattcattttgatgccatt----gcaaatagattgctttcttgatttcc-ttttcagaatgtttgctgtttgtgt i saiBol1.JH378136 I 923 I 28 s aotNan1.NW_018501505v1 6378953 495 - 11604778 tgggctttctattctgatccactggtctattctgttccattcatctatatgac---ttttatgttaatatcacacaattgggattgctgtagctttgtaatatatttcaaagtcagaatatgtgaga-ctctaactttgtttttctttcttaggattgttttggacattcagggtcccttgtagttccatatgaattttagaactgtcttttctatttctgtaaaattatcattggaatttttat-------agggattatatcaaacctgtaaattgctttggctagtattagaatttaaaaatattctttcaatccatgaaaatgggatgtctctccatttacttgtgtcttccttaatttctttcagcaatgttttgcagtattcagtgtacaagtcttt-----------cccctccctgactcagtttattcctaagtattttattcattttgatgccttt----gcaaatggattgctttcttgatttcc-ttttcagaatgtttgctgttcgtgt i aotNan1.NW_018501505v1 I 1464 I 11 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e cebCap1.NW_016107324v1 9298639 1585 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=687465.000000 s hg38.chr14_KI270725v1_random 149754 91 + 172810 ttttttgaatctttactttgaatcctgcaactttgctgaattaattttattagttccaag-agctttttgttgaatctttagggtttttt------ta s panTro5.chr1 126775648 90 + 228573443 ttttttgaatctttactttgaatcctgcaactttgctgaattcattttattagttctaag-agctttttgttgaatcttttgggtttttt------t- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388090 90 - 99763055 ttttttgaatctttgctttgaatcctgcaactttgttgaattcattttattagttctaag-aactttttgttgaatctttagggtccttt------t- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 12187 90 + 21985 ttttttgaatctttactttgaatcctgcaactttgctgaattcattttattagttctaag-agctttttgttgaatctttagggtttttt------t- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53534412 90 + 121039945 ttttttgaatctttactttgaatcctgcaactttgttgaattcattttattagttctaag-aactttttgttgaatctttagggtctttt------t- i nomLeu3.chr6 C 0 I 1 s rheMac8.chr7 146186513 91 - 169600520 ttttttgaatctttactttgaatcctgcagctttgttgaattcattttattagttctaagaaattttttgttgaatctttagggtttttt------a- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147864097 91 - 171882078 ttttttgaatctttactttgaatcctgcaactttgttgaattcattttattagttctaagaaattttttgttgaatctttagggtttttt------a- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26937200 91 + 40200012 ttttttgaatctttactttgaatcctgcaactttgttgaattcattttattagttctaagaaattttttgttgaatctttagggtttttt------a- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4382695 91 - 7633303 ttttttgaatctttactttgaatcctgcaactttgttgaattcattttattagttctaagaaattttttgttgaatctttagggtttttt------a- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36179899 97 + 58131712 ttttttgaatctttactttgaatcctgcaactttgttgaattgattttattagttctaagaaattttttgttgaatctttagcgtttttttttttat- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2573546 91 - 2620224 ttttttgaatctttactttgaatcctgcaactttgttgaattcattttattagttctaagaaattttttgttgaatctttaggatttttt------a- i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107987667 90 - 132174527 ttttttgaatctttactttgaatcctgaaactttgtggaattatttttattagttccaagaatttttctgttgaatctttatgattttct-------- i calJac3.chr10 I 18 C 0 s saiBol1.JH378136 10784242 88 + 21366645 ttttttaaatctttactttgaatcctgaaactc--tggaattctttttattagttccaagaatttttctgttgactctttatggttttct-------- i saiBol1.JH378136 I 28 C 0 s cebCap1.NW_016107324v1 9300224 90 + 13033340 ttttttgaatctttactttgaatcctgaaactttgtggaattctttttattagttccaagaatttttctgttgaatctttatggttttct-------- i cebCap1.NW_016107324v1 I 1585 C 0 s aotNan1.NW_018501505v1 6379459 85 - 11604778 ttttctgaatctttactttgaatcctgaaactttgtggaattctttttattagttccaagaatttttctgttgaatctt-----ttttca-------- i aotNan1.NW_018501505v1 I 11 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5812668 1910 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=9555.000000 s hg38.chr14_KI270725v1_random 149845 1 + 172810 a s panTro5.chr1 126775738 1 + 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388180 1 - 99763055 a i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 12277 1 + 21985 a i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5814578 1 + 72422247 a i ponAbe2.chrUn I 1910 I 750 s rheMac8.chr7 146186604 1 - 169600520 a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147864188 1 - 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26937291 1 + 40200012 a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4382786 1 - 7633303 a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36179996 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2573637 1 - 2620224 a i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107987757 1 - 132174527 a i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10784330 1 + 21366645 a i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9300314 1 + 13033340 a i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6379544 1 - 11604778 a i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I e nomLeu3.chr6 53534502 1 + 121039945 I a score=5939014.000000 s hg38.chr14_KI270725v1_random 149846 753 + 172810 tatataagatgatgttttctgggaatagaaaaaattttacttacttcttcctttccaatttggatgcc-tttatatctttttcttgctgaattattttagctaggactttatgtacttcataaaggcgtccttgccttgttcctgatcctgatcttagaagaagagatttcag-tttttcttcattaatatggtgtgaaatgtggg-tttttacatatggcctttattctgttggaataatttc-tttctattcctattttttcaagtgtttttctaacgagagaatgttgaatttcatcaaatgatctttctccatctacggagatgaacacgttatttgag----ttattttgttaatgtggcatattatattg----atttgcacatgttgaacccttcttgcattccaggaaca-aatccatcataattatggtggatgatactttatagtgctgttgaattcaatttactggtatttgttgagga-ttttgcatctacattcattaggaatattt------aa---ttttttttcttgtagcaccattgtctggctttgatattagggttatactagcttcacaaaaagagtttagaatagttctttcttctttaactttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagtaaagtcatctgcacctgaga-ttttctttgttggaagatttttgattactaatttaaacaccttactagctatagatttgttcatatttt s panTro5.chr1 126775739 749 + 228573443 tgtataagatgatgttttctgtgaatagaaaaaat-----ttacttcttcctttccaatttggatgccttttata-ctttttctagcttaattattttagctaggactttatgtacttcataaaggcatccttgctttgttcctgatcctgatcttagaagaagggttttcaa-tttttcttcattaacatgatgtgagctgtggg-tttttacatatggcctttattctgttggaataatttc-cctctattcctattttttcaagtgtttttctaacgagagaatgttgaatttcgtcaaatgctctttctccatctacagagatgaacacgttattttaa----ttgttttgttaatgtggcatattatattg----attttcacatgttgaaccgttcttgcattccaggaaaagaatccatcataattatggtggatgatactttatactgctgttgaattcaatttgctggtatttgttgagga-ttttgcatctacattcattaggaatattt------at---ttttttttcttatagcgccattgtctggctttgatattagggttatgctagcttctcaaaaagagtttagaattgttctttcttctttaattttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggcagaaatctctagtaaagtcacctgcacctgaga-tattctttgctggaagatttttgattactaatttaaacaccttattggctacagatttgttcatatttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388181 749 - 99763055 tatataagatgatgttttctgtgaatagaaaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctaggactttatgtacttcataaaggcatccttgccttgttcctgatcctgatcttagaaaaagagatttcag-tttttcttcattaatgtgatgtgagctgtggg-tttttacatgtggcctttattctgtaggaataatttc-cttctattcctagtttttcaagtgtttttctaaggaaagaatgttgaatttcatcaaatgctctttctccatctacggagatgaacatgtgattttaa----ttgttttgttaatgtggcatattatattg----attttcacatgttgaacccttcttgcattccaggaata-aatccatcataattatggtggatgatactttaaagtgctgttgaattcaatttgctgatatttgttgagga-ttttgcatctacattcattaggaatattt------aa----tttttttcttgtagtgccattgtctggttttgctattagggttatgctagcttcacagaaagagtttagaattgttctttcttctttaattttttatgaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagtaaagtcatctgcacctgaga-ttttctttgctgaaagatttttgattactgatttaaacaccttactagctatagatttgttcatatttt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 12278 747 + 21985 tatataagatgatgttttctgtgaatagaaaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctaggactttatgtacttcataaaggcgtccttgccttgttcctgatcctgatcttagaagaagagatttcag-tttttcttcattaatatgatgtgagctgtggg-tttttacatatggcctttattctgttggaataatttc-cttctattcctattttttcaagtgtttttctaacgagagaatgttgaatttcatcaaatgctctttctccatctacggagatgaacacgttattttaa----ttgttttgttaatgtggcatattatattg----atttgcacatgttgaacccttcttgcattccaggaaca-aatccatcataattatggtggatgatactttatagtgctgttgaattcaatttgctggtatttgttgagga-ttttgcatctacattcattaggaatattt------aa---ttttttttcttgtagcgccattgtctggctttgatattagggttatgctagcttcaca-aaagagtttagaattgttctttcttctttaattttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagtaaagtcacctg-gcctgaga-ttttctttg-tggaagatttttgattactaatttaaacaccttactagctatagatttgttcatatttt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53534503 749 + 121039945 tatataagatgatgttttctgtgaatagagaaaatt----ttacttcttcctttccaatttggatgtcttttatatctttttcttgcttaattattttagctaggactttatgtacttcataaaggcatccttgccttgttcctgatgctgatcttagaagaagagatttcag-tttttcttcattcatatgatgtgagctttggg-tttttacatatggcctttattctgtaggaataatttc-cttctattcctattttttcaagtgtttttctaaggaaagaatgttgaatttcaccaaatgctctttctccatctacggagatgaacatgtgattttaa----ttgttttgttaatgtggcatattatattg----attttcacatgttgaacccttcttgcattccaggaata-aatccatcgtaattatggtggatgatactttaaagtgctgttgaattcaatttgctgatatttgttgagga-ttttgcatctacattcattaggaatattt------aa---ttttttttcttgtagtgccattgtctggttttgatattagggttatgctagcttcacaaaaagagtttagaattgttccttcttctttaattttttatgaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagtaaagtcatctgcacctgaga-ttttctttgctgaaagatttttgattac-aatttaaacaccttactagctatagatttgttcatatttt i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 146186605 743 - 169600520 tatat--gatgatgttttcggtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctgggactttatgtacgtcataaaggcatccttgccttgttcctgatcc--atcttagaagaagatatttcag-tttttcttcattaatattacgtgagctgcgggctttttacatatggcctttattctgttggaataatttc-cttctattcctgttttttcaagtgtttttctcatgaaagaatgttgaatttcgtcaaatgctctttttccatctacggagatgaacatgtgattttaatcatttgttttgttaatgtggtttattatattg----attttcaca---cgaactcttctt--------agaata-aatccatcataattatggtggatgatactttaaagtgctgttgaattcaatttgctggtatttgttgtgga-ttttgcatctacgttcattaggaatattt------aa-ttttttttttcttgtagtgccattgtctggctttgatattagggttatgctagattcacaaaaagagtttagaattgttctttcttctttagttttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagcaaagtcatctacacctgagatttttctttgctggaagatttttgattactgatttaaacaccttactagctagagatttgttcatatttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147864189 743 - 171882078 tatat--gatgatgttttcggtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctgggactttatgtacgtcataaaggcatccttgccttgttcctgatcc--atcttagaagaagatatttcag-tttttcttcattaatattacgtgagctgcgggctttttacatatggcctttattctgttggaataatttc-cttctattcctgttttttcaagtgtttttctcatgaaagaatgttgaatttcgtcaaatgctctttttccatctacggagatgaacatgtgattttaatcatttgttttgttaatgtggtttattatattg----attttcaca---cgaactcttctt--------agaata-aatccatcataattatggtggatgatactttaaagtgctgttgaattcaatttgctggtatttgttgtgga-ttttgcatctacgttcattaggaatattt------aa-ttttttttttcttgtagtgccattgtctggctttgatattagggttatgctagattcacaaaaagagtttagaattgttctttcttctttagttttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagcaaagtcatctacacctgagatttttctttgctggaagatttttgattactgatttaaacaccttactagctagagatttgttcatatttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26937292 744 + 40200012 tatat--gatgatgttttcggtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctgggactttatgtacgtcataaaggcatccttgccttgttcctgatcc--atcttagaagaagatatttcag-tttttcttcattaatattacgtgagctgcgggctttttacatatggcctttattctgttggaataatttc-cttctattcctgttttttcaagtgtttttctcatgaaagaatgttgaatttcgtcaaatgctctttttccatctacggagatgaacatgtgattttaattatttgttttgttaatgtggtttattatattg----attttcaca---cgaactcttctt--------agaata-aatccatcataattatggtggatgatactttaaagtgctgttgaattcaatttgctggtatttgttgtgga-ttttgcatctacgttcattaggaatattt------aatttttttttttcttgtagtgccattgtctggctttgatattagggttatgctagattcacaaaaagagtttagaattgttctttcttctttagttttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggcagaattctctagcaaagtcatctacacctgagatttttctttgctggaagatttttgattactgatttaaacaccttactagctagagatttgttcatatttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4382787 744 - 7633303 tatataagatgatgttttcggtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctgggactttatgtacttcataaaggcatccttgccttgtttctgatcc--atcttagaagaagatatttcag-tttttcttcattaatattatgtgagctgcgggctttttacatatggcctttattctgttggaataatttc-cttctattcctgttttttcaagtgtttttctcatgaaagaatgttgaatttcgtcaaatgctctttttccatctacggagatgaacatgtga-tttaattatttgttttgttaatgtggtttgttatattg----attttcaca---cgaactcttctt--------agaata-aatccatcataattatggtggatgatactttaaagtgctgttgaattcaatttgctggtatttgttgtgga-ttttgcatctacgttcattaggaatattt------aa-tttcttttttcttgtagtgccattgtctggctttgatattagggttatgctagattcacaaaaagagtttagaattgttctttcttctttagttttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggtagaattctctagcaaagtcatctgcacctgagatttttctttgctggaagatttttgattactgatttaaacaccttactagctagagatttgttcatatttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36179997 746 + 58131712 tatataagatgatgttttctgtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctgggactttatgtacttcataaaggcatccttgccttgttcctgatcc--atcttagaagaagatatttcag-tttttcttcattaatattacgtgagctgtgggctttttacatatgccctttattctgttggaataatttc-cttctattcctgttttttcaagtgtttttctcatgaaagaatgttgaatttcctcaaatactctttctccatctatggaggtgaacatgtgattttaattatttgttttgttaatgtggtttattatattg----attttcaca---tgaacccttctt--------ggacta-aatccatcataattatagcggatgatactttaaagtgctgttgaattcaatttgctggtatttgttgtgga-tcttgcatctacattcattaggaatattt------aatttttttttttcttgtagtgccattgtctggctttgatattggggttacgctagattcacaaaaagagtttagaattgttctttcttctttagttttttaggaatgtctgagaaatattggcattaattcttccttaaatgttagcagaattctctagcaaagtcatctgcgcctgagatttttctttgcaggaagatttttgattactgatttaaacaccttactagctagagatttgttcatatttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2573638 744 - 2620224 tatataagatgatgttttcagtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttagctgggactttatgtacttcataaaggcatccttgccttgtttctgatcc--atcttagaagaaaatatttcag-tttttcttcattaatattatgtgagctgcgggctttttacatatggcctttattctgttggaataatttc-cttctattcctgttttttcaagtgtttttctcatgaaagaatgttgaatttcgtcaaatgctctttttccatctacggagatgaacatgtga-tttaattatttgttttgttaatgtggtttgttatattg----attttcaca---cgaactcttctt--------agaata-aatccatcataattatggtggatgatactttaaagggctgttgaattcaatttgctggtatttgttgtgga-ttttgcatctacgttcattaggaatattt------aa-ttttttttttcttgtagtgccattgtctggctttgatattagggttatgctagattcacaaaaagagtttagaattgttctttcttctttagttttttaggaatgtttgagaaatattggcattaattcttccttaaatgttggtagaattctctagcaaagtcatctgcacctgagatttttctttgctggaagatttttgattactgatttaaacaccttactagctagagatttgttcatatttt i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107987758 754 - 132174527 tacataagataatgttttctgtgaatagagaaagtt----ttacttcttcctttctaatttggatgccttttatatctttttcttgcttaattattttatctaggactatatgtacttcat-aaggcaccctaactttattcct----c--atcttagaagaagagatttcagttttttcttcact---gtgatgtgagctgtgggctttttatatatgtcctttattctgttggaataattttatttctattcctattttttcagttgtttttatcatgaaagaatgttgaatttggtcaaatgctttttctccagctatggagatgaacaagtgattttaattatttgtttttttaatgtggtatatcatattgatggattttcacatgttgtacccttcttgcattccaggaata-aattcttcatgattatggtggatgatattttaaagtgctgttgaaatcaatttgctggtatttgctgaggatttttgcatctac-ttaattaggaatattcattgtaaa-----ttttttcttgtagtgccactgtatggctttgacattggcattatgctagcttcacaaaaggagtttaaaattgttctttcttctttaa-tttttaggagcatttgagaaatattggcattaattcttccttaaatgctggcagaattctctagtaaagtcatctgcacctgaga-ttttctttgctggaagatatttgattactgatttaaacaccttactagttatagatttgtttgtatttt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10784331 752 + 21366645 tacataagataatgttttctgtgaatagagaaaatt----ttacttcttcctttccaattcggatgccttttatatctttttcttgcttaattattttatctaggactatatgtacttcgt-aaggcaccctttctttattcct----c--atcttagaagaagagatttcag-gttttcttcatt---gcgatgtgagctgtgggctttttatatatgtcctttattctgttggaataattttatttctatttctattttctcagttgtttttatcatgaaagaatgttgaatttagtcaaatgctttttctctagctatggagatgaatatgtgattttaattatttg-atttttaatgtagtatatcatattgatgaattttcacatgttgaacccttcttgcattccaggaata-agttcttcatgattatggtgggtgatattttaaagtgctattgaattcaatttcctggtatttgttgaggatttttgcatctacattcattaggaatattcgttgtaaa------tttttctcatagtgcaactgtatggctttgacattaggattatgctagcttcacaaaaggagtttaaaattattctttcctctttaa-tttttaggagcatttgagaaatattggcattaattcttccttaaatgttggcagaattatctaggaaagtcatctgcacctgaga-ttttctttgctggaagatttttgattactgatttaaacatcttactagttacagatttgttcatatttt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9300315 752 + 13033340 tacataagataacgttttctgtgaatagagaaaatt----ttacttcttcctttccaattcagatgccttttatatcttttccttgcttaattattttatctaggactatatgtacttcac-aaggcacccttactttattcct----c--aacttagaaaaagagatttcag-gtttttttcatt---gcgatgtgagctgtgggctttttatatatgtcctttattctgttggaataattttatttctattcctattttttcagttgtttttattatgaaagaatgttgaatttggtcaaatgctttttcttcagctatggagatgaacatgtgattttaattacttgtttttttaatgtagtgtatcatattgatggattttcacatgttgaacccttcttgcattccaggaata-aattcttcatgattatggtggatgatattttaaagtgctgttgaattcaatttgctggtatttcttgaggatttttgcatctaaattcattaagaatattcattgtaaa----tttttttctcatagtgccactgtatggctttgacatcagggttatgctagcttcacaaaaggagtttaaaattgttc-ttcctctttaa-tttttaggagtatttgagaaatattggcattaattcctccttaaatgttggcagaattctctgggaaagtcatcttcacct--ga-ttttctttgctggaagatttttgattactgatttaaacatcttactagttatagatttgttcatatttt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6379545 755 - 11604778 tacataagataatgttttctgtgaatagagaaaatt----ttacttcttcctttccaatttggatgccttttatatctttttcttgcttaattattttatctaggactatatgtacttcat-aaggcacccttactttattcct----c--atcttagaagaagagatttctg-tttttcttcatt---gtgatgtgagctgtgggttttttatatatgtcctttattctgttggaataattttatttctattcctattttttcagttgtttttatcatgaaagaatgttgaatttggtcaaatgctttctctccagctatggagatgaacatgtgatttaaactatttgtttttttaatgtgttatatcatattgatggattttcacatgttgaacccttcttgcattccaggaata-aattcttcatgattatggtggatgatatttttaagtgccgttgaattcaatttgctggtatttgttgaggatttttgaatctacattcattaggaatattcattgtaaa----tttttttcttgtagtgccgctgtgtggctttgacattagggttatgctagctccacaaaaggaatttaaaattgttctttcctctttaa-tttctaggagcatttgagaaatattggcattaattcttccttaaatgttggcagaattctctagtaaagtcatctgcacctgaga-ttttctttgctagaagatttttaattactgatgtaaacaccttactagttatagatttgttcatatttt i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5814579 750 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=12000.000000 s hg38.chr14_KI270725v1_random 150599 1 + 172810 g s panTro5.chr1 126776488 1 + 228573443 g i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388930 1 - 99763055 g i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13025 1 + 21985 g i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5815329 1 + 72422247 g i ponAbe2.chrUn I 750 I 785 s nomLeu3.chr6 53535252 1 + 121039945 g i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187348 1 - 169600520 g i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147864932 1 - 171882078 g i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938036 1 + 40200012 g i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4383531 1 - 7633303 g i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36180743 1 + 58131712 g i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2574382 1 - 2620224 g i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107988512 1 - 132174527 g i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785083 1 + 21366645 g i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301067 1 + 13033340 g i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6380300 1 - 11604778 g i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=383212.000000 s hg38.chr14_KI270725v1_random 150600 45 + 172810 tatttctttttgattcagtgttgtttgttgtatatttccagtaat s panTro5.chr1 126776489 45 + 228573443 tatttcttcttggttcagtgttgtgggttgtatatttccagtaat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388931 45 - 99763055 tatttcttcttgattcagtgttgtaagttgtatatttccagtaat i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13026 44 + 21985 tatttcttcttgattcagtgttgt-ggttgtatatttccagtaat i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53535253 45 + 121039945 tatttcttcttgattcagtgttgtaggatgtatatttccagtaat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187349 45 - 169600520 tatttcttcttgattcagtgttataggttgtatatttccagtaat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147864933 45 - 171882078 tatttcttcttgattcagtgttataggttgtatatttccagtaat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938037 45 + 40200012 tatttcttcttgattcagtgttataggttgtatatttccagtaat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4383532 45 - 7633303 tatttcttcttgattcagtgttataggttgtatatttccagtaat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36180744 45 + 58131712 tatttcttcttgattcggtgttataggttgtgtatttccagtaat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2574383 45 - 2620224 tatttcttcttgattcagtgttataggttgtatatttccagtaat i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107988513 45 - 132174527 tattttttcttgagtcagtgttgtaggttgtatatttccagtaat i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785084 45 + 21366645 tatattttcttgagtcagtattgtaggttgtatatttccagtaat i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301068 45 + 13033340 tattttttcttgagtcagtattgtaggttgtgtatttccagtaat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6380301 45 - 11604778 tattttttcttgagtcagtgttgtaggttgtatatttacagtaat i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5815330 785 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr9 113831733 10238 + 125196307 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=3423.000000 s hg38.chr14_KI270725v1_random 150645 1 + 172810 t s panTro5.chr1 126776534 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388976 1 - 99763055 t i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13070 1 + 21985 t i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53535298 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187394 1 - 169600520 c i rheMac8.chr7 C 0 I 3 s macFas5.chr7 147864978 1 - 171882078 c i macFas5.chr7 C 0 I 3 s macNem1.NW_012010577v1 26938082 1 + 40200012 c i macNem1.NW_012010577v1 C 0 I 3 s cerAty1.NW_012000887v1 4383577 1 - 7633303 c i cerAty1.NW_012000887v1 C 0 I 3 s papAnu3.chr7 140791854 1 - 162156779 c i papAnu3.chr7 I 10238 I 13520 s chlSab2.chr26 36180789 1 + 58131712 c i chlSab2.chr26 C 0 I 3 s manLeu1.NW_012108674v1 2574428 1 - 2620224 c i manLeu1.NW_012108674v1 C 0 I 3 s calJac3.chr10 107988558 1 - 132174527 t i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785129 1 + 21366645 t i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301113 1 + 13033340 t i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6380346 1 - 11604778 t i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5815330 785 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=2778770.000000 s hg38.chr14_KI270725v1_random 150646 371 + 172810 --tg-tttttttctaggttatccaattattaccataataattcacagcagtctctaataatctt-ttttatttctgtggcatcaattgcaatgtctactttttcatttttaattttatttggttgagtcttttctctttttaattgccatattccattgtatagtaataccacag------tttttttttaatctattcacttgcattggttctactttctggttataatgaaaatatgtgtgtgaaaatatcctttatttg-cttaatttttattatttccttccttttgctgggtttgggcttggttc---tt------ttttttagttccttgagttgtaaagttaggttgtttatttgagatctttcttcttttttaaggtaggcat s panTro5.chr1 126776535 373 + 228573443 --tgatttttttctaggttacccaattactaccataatcattcacagcagtctcttataatcttcttttatttctgtggcatcaattgcaatatctactttttcatttttaattttatttggttgagtcttttctctttttaattgccatattccattgtatagtaatacgaca--------ctttttaaaatctattcacttgcattggttctactttctggttataatgaaaatatgtgtgtgaaaatatcctttatttgaattaatctttattatttccttccttttgctggatttgggcttagttc---ttc-----tttcttagttccttgagttgtaaagttaggttgtttatttgagatctttcttcttttttaaggtaagcat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55388977 374 - 99763055 --tgatgtttttctaggttatccaattactatcataatcatttgcagcagtctcttataatctt-ttttatttttgtggcatcaattgcaatgtctactttttcatttttaattttatttggttgagtcttttctctttttaattgccatattccattgtatagtaataccacag-------ttttttttaatctattcacttgcattggttccactttctggttataatgaaaatatgtgtgtgaaaatatcctttatttgcattaatctttattatttccttccttttgctgggtttgggcttagttc---tac----tttttttagttccttgagttgtaaagttaggttgtttatttgagatctttcttcttttttaaggtaggcat i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13071 373 + 21985 --tgatttttttctaggttatccaattactaccataatcattcacagcagtctcttataatctt-ttttatttctgtggcatcaattgcaatgtctactttttcatttttaattttatttggttgagtcttttctctttttaattgccatattccattgtatagtaataccacag-------ttttttttaatctattcacttgcattggttctactttctggttataatgaaaatatgtgtgtgaaaatatcctttatttgcattaatctttattatttccttccttttgctgggtttgggcttagttc---ttc-----ttttttagttccttgagttgtaaagttaggttgtttatttgagatctttcttcttttttaaggtaggcat i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53535299 372 + 121039945 --tgatgtttttctaggttatccaattactaccataatcattcacagcagtctcttataatctt-ttttatttttgtggaatcaattgcaatgtctactttttcatttttaattttatttggctgagtcttttctctttttaattgccatattccattgtatagtaataccacag-----ttttttttttaacctattcacttgccttggttctactttctggttataatgaaaatatgtgtgtgaaaacatcctttatttgcattaatctttattattttcttccttttgctgggtttcggcttagttc---t-------ttttttagttccttg-gttgtaaagttagattgtttatttgagatgtttcttcttttttaaggtaggcat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187398 364 - 169600520 ---gatttgtttctaggttacccaattactactataatcattcacagcagtctcttacagtctt-ttttgtttctgtggcatcaatcgcaatgtctactttttcagtttta-----atttgactgagtcttttctctttttaattgccatattccactgtatagtaatac--cag----tttttttttttaatctattcacttggattggttccactttctggttataatgaaaatatctgtgtgaaaagatcctttatttgcatgaatctttattatttccttccttttgctgggtttgggcttagttc--ttt------ttttttagttccttgagttgtaaagtcaggtgg----tttgagatctttcttctgttttaaggtaggcat i rheMac8.chr7 I 3 C 0 s macFas5.chr7 147864982 366 - 171882078 ---gatttgtttctaggttacccaattactactataatcattcacagcagtctcttacagtctt-ttttgtttctgtggcatcaatcgcaatgtctactttttcagtttta-----atttgactgagtcttttctctttttaattgccatattccactgtatagtaataccacag----tttttttttttaatctattcacttggattggttccactttctggttataatgaaaatatctgtgtgaaaagatcctttatttgcatgaatctttattatttccttccttttgctgggtttgggcttagttc--ttt------ttttttagttccttgagttgtaaagtcaggtgg----tttgagatctttcttctgttttaaggtaggcat i macFas5.chr7 I 3 C 0 s macNem1.NW_012010577v1 26938086 371 + 40200012 ---gatttgtttctaggttacccaattactactataatcattcacagcagtctcttacagtctt-ttttgtttctgtggcaccaatcgcaatgtctactttttcagtttta-----atttgactgagtcttttctctttttaattgccatattccactgtatagtaataccacag-ttttttttttttttaatctattcacttggattggttccactttctggttataatgaaaatatctgtgtgaaaagatcctttatttgcatgaatctttattatttccttccttttgctgggtttgggcttagttcttttt------ttttttagttccttgagttgtaaagtcaggtgg----tttgagatctttcttctgttttaaggtaggcat i macNem1.NW_012010577v1 I 3 C 0 s cerAty1.NW_012000887v1 4383581 364 - 7633303 ---gatttgtttctaggttacccaattactactataatcattcacagcagtctcttacagtc---ttttgtttctgtggcatcaatcgcaatgtctactttttcagtttta-----atttgactgagtcttttctctttttaattgccatattccactgtatagtaacaccacag---tcttttttttttaatctattcacttggattggttccactttctggttataatgaaaatatctgtgtgaaaagatcctttatttgcatgaatctttattatttccttccttttgctgggtttgggcttagttc---tt------ttttttagttccttgagttgtaaagtcaggtgg----tttgagatctttcttctgttttaaggtaggcat i cerAty1.NW_012000887v1 I 3 C 0 s chlSab2.chr26 36180793 365 + 58131712 ---gatttgtttctaggttacccagttactactataatcattcacagcagtctcttacagtctt-gtttatttctgtggcatcaatcgcaatgtctactttttcagtttta-----atttgactcagtcttttctctttttaattgccatattccattgtatagtaataccacag----tttttttttttaatctattcacttggattggttccacttactggttataatgaaaatatctgtgtgaaaagatcctttatttgcatgaatctttattatttccttccttttgctgggtttgggcttagttc---tt------ttttttagttccttgagttgtaaagtcaggtgg----tttgagatctttcttctgttttaaggtaggcat i chlSab2.chr26 I 3 C 0 s manLeu1.NW_012108674v1 2574432 368 - 2620224 ---gatttgtttctaggttacccaattactactataatcattcacagcagtctcttacagtctt-ttttgtttctgtggcatcaatcgcaatgtctactttttcagtttta-----atttgactgagtcttttctcttcttaattgccatattccactgtatagtaataccacagtttttttttttttttaatctattcacttggattggttccactttctggttataatgaaaatatgtgtgt-aaaagatcctttatttgcatgaatctttattatttccttccttttgctgggtttgggcttagttc---tt------ttttttagttccttgagttgtaaagtcaggtgg----tttgagatctttcttctgttttaaggtaggcat i manLeu1.NW_012108674v1 I 3 C 0 s calJac3.chr10 107988559 373 - 132174527 tctgatttttttctaagttatccaattactatcatcattgttcatagcagtctcttgtaatctt----tatttctgtggcatcaattgtaatgtctcctttttcatttttaattttacttggtttaatcttttctctttt--attgccatattccattgtatagtaataccacag---------tttgtttatctgttcacttggattgcttctactttctagttattatgaaaatatgtgtgtaaaaatatgccttatttgcattcatctttattatttccttccttttgctgggtttgggcttagttt---gttcttatttttctagttccttgagttgaaaagttaggttgtatattggagatctttattcttttttaacgtaggcat i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785130 372 + 21366645 tatgatttttttctaggttatccaggtactatcatcattgttcatagcagtctcttgtaatctt----tatttctgtggcttcaattttaatgtctcctttttcatttttaattttacttggttgaatcttttctctttt--attgccatattccattgtatagtaataccacag---------tttgtttatctgttcacttggattgcttctactttctggttattaggaaaatacgtgtgtaaaaatatgccctatttgcattcatctttattatttccttccttttgctgggttt-ggcttagttt---tttcttatttttctagtttcttgagttgaaaagttaggttgtttattggagatctttcttgttttttaatgtaggcat i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301114 372 + 13033340 tctga-ttttttctaggttatccaattactatcataattgttcataacagtctcttgtaatctt----tatttctgtggcatcaattgtaatgtctcctttttcatttttaattttacttagttgaatcttttctctttt--attgccatattccattgtatagtaataccacag---------tttgtttatctgttcacttggattgcttctactttctggttattatgaaaatatgtgtgtaaaaatgtgccttatttgcattcatctttattatttccttccttttgctgggtttgggcttagttt---gttcttatttttctagttccttgagttgaaaagttaggttgtttattggagatctttcttcttttttaatgtaggcat i cebCap1.NW_016107324v1 C 0 I 38 s aotNan1.NW_018501505v1 6380347 370 - 11604778 tctga-ttttttctaggttatccaattactatcatcattgttcatagcagtctcttgtaatc------tatttctgtggcatcaattgtaatgtctcctttttcatttttaattttacttggttgaatctgttctctttt--attgccatattccattgtatagtaataccacag---------tttgtttatctgttcacttggattgcttctattttctggttattatgaaaatatgtgtgtaaaaatatgacttatttgcattcctctttattatttccttccttttgctgggtttgggcttagttt---gttcttatttttctagttccttgcattgaaaagttaggtcgtttattggagatctttcttcttttttaatgtaggcat i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5815330 785 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=299009.000000 s hg38.chr14_KI270725v1_random 151017 41 + 172810 ttattgctataaatttccctctttagtactgcctttgctgc s panTro5.chr1 126776908 41 + 228573443 ttattgctataaatttccctctttagtactgtctttgctgc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389351 41 - 99763055 ttattgcgataaatttccctctttagtactgcctttgctgc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13444 41 + 21985 ttattgctataaatttccctctttagtactgcctttgctgc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53535671 41 + 121039945 ttattgctataaatttccctctttagtactgcctttgctgc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187762 40 - 169600520 ctattgctataaatttccctc-ttagtactgcctttgctgc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865348 40 - 171882078 ctattgctataaatttccctc-ttagtactgcctttgctgc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938457 40 + 40200012 ctattgctataaatttccctc-ttagtactgcctttgctgc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4383945 40 - 7633303 ttattgctataaatttccctc-ttagtactgcctttgctgc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181158 40 + 58131712 ttattgctataaatttccctc-ttagtactgcctttgctgc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2574800 40 - 2620224 ttattgctataaatttccctc-ttagtactgcctttgctgc i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107988932 40 - 132174527 ttattgttataaacttccctc-ttagtactgcctttgctgc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785502 40 + 21366645 ttattgttataaacctcccca-ttagtactgcctttgctac i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 6380717 40 - 11604778 ttattgttataaacttccctc-ttagtactgcctttgctgt i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5815330 785 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26797038 3028 - 40214260 I e otoGar3.GL873530 36210217 0 - 36342412 C e cebCap1.NW_016107324v1 9301486 38 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=67493.000000 s hg38.chr14_KI270725v1_random 151058 8 + 172810 atttctaa s panTro5.chr1 126776949 8 + 228573443 atttctaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389392 8 - 99763055 atttctaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13485 8 + 21985 atttctaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53535712 8 + 121039945 atttctaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187802 8 - 169600520 atttctaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865388 8 - 171882078 atttctaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938497 8 + 40200012 atttctaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4383985 8 - 7633303 atttctaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181198 8 + 58131712 atttctaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2574840 8 - 2620224 atttctaa i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107988972 8 - 132174527 attcctaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785542 8 + 21366645 attcctaa i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 6380757 8 - 11604778 attcctaa i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800066 8 - 40214260 atccctac i canFam3.chr30 I 3028 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5815330 785 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e otoGar3.GL873530 36210217 0 - 36342412 C e cebCap1.NW_016107324v1 9301486 38 + 13033340 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=2415415.000000 s hg38.chr14_KI270725v1_random 151066 317 + 172810 gttttgctatg--------------t------------tgtgt------ttttttatttttttgtcagcttcttttctaatattctttttgatttcttctttgactcattggttgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----tgttttccttctactattgaatttttgcttcatcctac--------ttttggtcaaaa----caggttcttgatttcctttgtcttaattttgttaagactcgctttgt--------gacctaacatttgatctatcctggagaatgtGTCAGGATATGTCActttgccagataatttatatacctccatttttg-aagggttgatatttg s panTro5.chr1 126776957 316 + 228573443 gttttgctatg--------------t------------tgt-t------ttttttatttttttgtcagcttgttttcttatattctttttgatttcttctttgactcattggttgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----agttttccttctactattgaagttttgcttcatcctac--------ttttggtcaaaa----caggttcttgatttcctttctcttaaatttgttaagacttgttttgt--------aacctaacatgtgatctatcctggagaatgtGTCAGGATGTATCActttggcagataatttatatacctccatttttg-aagggttgatatttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389400 320 - 99763055 gttttgctatg--------------t------------tgtgtgtg---tgtgttttttttttgtcagcttgttttgtaacattctttttgatttcttctttgattcattggttgttcaatagtatgttgtttaatttccatatgtttgtaaatgtttc----agttttacttctactattgaatttttgcttcatcctat--------ttttggtcaaaa----cagattcttgatttcctttgtcttaaatttgttaagacttgttttat--------gacctaacatgtgatctatcctggagaatgtGTCAGGGTATGTCACtttgccagataatttatatacctccatttttg-aagggttgatatttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13493 315 + 21985 gttttgctatg--------------t------------tgtgt------tttttta-ttttttgtcagcttgttttctaatattctttttgatttcttctttgactcattggttgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctac--------ttttggtcaaaa----caggttcttgatttcctttgtcttaaatttgttaagacttgttttgt--------gacctaacat-tgatctatcctggagaatgtGTCAGGATATGTCActttgccagataatttatatacctccatttttg-aagggttgatatttg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53535720 321 + 121039945 gttttgctatg--------------t------------tgtgtgtggttttttttttttttttgtcagcttgttttgtaacattcttgttgatttcttctttgactcattggttgttcaatagtatgttgtttaatttccatatgtttgtaaatgtttc----agttttccatctgctattgaatttttgcttcatcctat--------atttggtcaaaa----cagcttcttgatttcctttgtcttaaatttgttaagacttgttttgt--------gacctaacg--tgatctgtcctggagaatgtGTCAGGATATGTCACtttgccagaaaatttatatacctccatttttg-aagggttgatatttg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146187810 327 - 169600520 gttttgctatg--------------t----tgtgtgtgtgtgtgtg---tgtgttg--tttttgtcagcttgttttctaacattctttttgatttcttctttgactcattgattgttcaatagtatgttgtttaatctccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctat--------ttttggtcaaaa----cagattcttgatttactttgtcttaaatgtgttaagacttattttgt--------gacctaacatgcgatctgtcctggagaatgtGTCAGGATATATCACtttgccagataatttatatacctccatttttgaaagggttgattttcg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865396 327 - 171882078 gttttgctatg--------------t----tgtgtgtgtgtgtgtg---tgtgttg--tttttgtcagcttgttttctaacattctttttgatttcttctttgactcattgattgttcaatagtatgttgtttaatctccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctat--------ttttggtcaaaa----cagattcttgatttactttgtcttaaatgtgttaagacttattttgt--------gacctaacatgcgatctgtcctggagaatgtGTCAGGATATATCACtttgccagataatttatatacctccatttttgaaagggttgattttcg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938505 337 + 40200012 gttttgctatg--------------t----tgtgtgtgtgtgtgtg---tgtgttgtttttttgtcagcttgttttctaacattctttttgatttcttctttgactcattgattgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctat--------ttttggtcaaaa----cagattcttgatttactttgtcttaaatgtgttaagacttattttgtctaactaagacctaacatgcgatctgtcctggagaatgtGTCAGGATATATCACtttgccagataatttatatacctccatttttgaaagggttgattttcg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4383993 319 - 7633303 gttttgctatg--------------t------------tgtgtgtg---tgtgttg--tttttgtcagcttgttttctaacattctttttgatttcttctttgactcattgattgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctat--------ttttggtcgaaa----cagattcttgatttactttgtcttaaatgtgttaagacttgttttgt--------gacctaacatgcgatctgtcctggagaatgtGTCAGGATATATCACtttgccagataatttatatacctccatttttgaaagggttgatttttg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181206 345 + 58131712 gttttgctatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg---tgtgttg--tttttgtcagcttgttttctaacattctttttgatttcttctttgactcattgatcgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctat--------ttttggtggaaa----cagattcttgatttactttgtcttaagtttgttaagacttgttttgt--------gacctaacatgcgatctatcctggagaatgtGTCAGGATATATCActttgccaggtaatttatatacctccatttttgaaagggttgatttttg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2574848 331 - 2620224 gttttgctatg--------------ttgtgtgtgtgtgtgtgtgtg---tgtgttg--tttttgtcagcttgttttctaacattctttttgatttcttctttgactcattgattgttcaatagtatgttgtttaatttccatatatttgtaaatgtttc----agttttccttctactattgaatttttgcttcatcctat--------ttttggtcaaaa----cagattcttgatttactttgtcttaaatgtgttaagacttgttttgt--------gacctaacatgcgatctgtcctggagaatgtGTCAGGATATATCACtttgccagataatttatatacctccatttttgaaagggttgatttttg i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107988980 307 - 132174527 gttttgctgtg--------------t------------------tt---ttttttt--tttttctcagcatgttttctaacattctttttgatttcttctttgacccattggttgttcaatagtatgttgttttattttcacatgtttgtaaatgtttt----cattttccttttactatttaatttgtgctttatcctat--------ttttgatcaaaa----c--attcttcatttcta-tgtc-taaattttttaagacttgttttgt--------tatctaacg--tgatctttcctggagaacgATTCAGGATATGTCACtttgacagataatttctatacctccatttttgaaacggttgatttttg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785550 314 + 21366645 gttttgctgtg--------------t---------------gtgtg---tgtgttt--ttttcctcagcatgttttctaacaatcattttgatttcttctttgaaccattggttgttcaatagtatgttgtttaattttcacatgtttgtaaatgtttc----agttttccttttactatttaatttgtgctttatcctat--------ttttgatcaaaa----cagattcttgatttctattgtcttaaatttgctaagacttgttttgt--------tacctaaca--tgatctttcctggagaatgATTCAGGATATGTCGctttaccggataatttctatacctccatttttgaaagcgttgatttttg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301524 303 + 13033340 tttttgttttt--------------t----------------tntt---ttttgtt--tttttctcagcatgttttctaacattctttttgatttcttccttgacccattggttgttcaatagtatgctgtttaattttcacatgtttgtaaatgtttc----agttttccttttactatttaatttgtaaatta------------------aattaaaa----cagattcttgatttctgttgtcttaaatttgttaagacttgttttgt--------tatctaatg--tgatctttcctggagagtgATTCAGGATATGTCActttgccagataatttctatacctccgtttttgaaagggttgatttttg i cebCap1.NW_016107324v1 I 38 C 0 s aotNan1.NW_018501505v1 6380765 307 - 11604778 gtttttctgtt--------------t-----------------------ttttttt--tttttctcagcatgttttctaacattctttttgatttcttctttgacccattggttgttcaatagtatgttgtttaattttcac--gtttgtaaatgtttc----agctttccttttactatttaatttgtgctttatcctat--------ttttgatcaaaa----cagattcttgatttctattgtcttaaatttgttaagacttgttttgt--------tacctaacg--tgatctctcctggagaatgATTCAGGATATGTCActttgccagataatttctatacctccatttttgaaagggttgatttttg i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800074 293 - 40214260 tctttactctt--------------t------------tgcac------tctgttt--ctttttgctcctctgactatatcatttcaaatggtctgtatttgagttcattgattctttcttc-tat-ttgatcaaatctgatat-----tgaatctttctagtggattttcttcaact-ttaaatgtttttttttttatattttatacctttttgttgatattttcattttcttcatgcatgtttccctgagttcactcagcacctttatgc--------cagtcattt--tgaatt----------------------------ctttgttagataattcttacacctaaatttctt-tagggttggtttctg i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5815330 785 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=13600.000000 s hg38.chr14_KI270725v1_random 151383 1 + 172810 g s panTro5.chr1 126777273 1 + 228573443 g i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389720 1 - 99763055 g i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13808 1 + 21985 g i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5816115 1 + 72422247 g i ponAbe2.chrUn I 785 I 1396 s nomLeu3.chr6 53536041 1 + 121039945 g i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188137 1 - 169600520 g i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865723 1 - 171882078 g i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938842 1 + 40200012 g i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384312 1 - 7633303 g i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181551 1 + 58131712 g i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575179 1 - 2620224 g i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989287 1 - 132174527 g i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785864 1 + 21366645 g i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301827 1 + 13033340 g i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381072 1 - 11604778 g i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800367 1 - 40214260 g i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=1867588.000000 s hg38.chr14_KI270725v1_random 151384 224 + 172810 aaacttatttt----cttctttttattaggccatgtttccctgtttccttgtgtgccttttaattttgtgttgttattctaggatttg-------------aaaaaaataa----------ccacttctccttgtctttacagactggttttgcactgggaaatcctttcaccagtcagcccagttagagattctgaag-tgtgtcaaatc--t-ttctgTGAATGTATTGTCTCTGAAAT-TGTGTGTAAATTCT s panTro5.chr1 126777274 224 + 228573443 aaacttatttt----cttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcgattctaggatttg-------------aaaaaaataa----------ccacttctccctatctttacagactggttttgcactgggaaatcctttcaccagtcagtccagttagagattctgaag-tgtgtcaaatc--t-ttctgTGAATGTATTGTCTCTGGAAT-TGTGTGTAAATTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389721 225 - 99763055 aaacttatttt----gttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcgattctaggatttg-------------aaaaaaataa----------ccacttctccctgtctttacagactggttttgcactgggaaattctttcacctgtcagcccagttagagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGTCTCTGGAAT-TGTGTGTAAATTCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 13809 224 + 21985 aaacttatttt----gttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgtgattctaggatttg-------------aaaaaaataa----------ccacttctccctgtctttacagactggttttgcactgggaaatcctttcaccagtcagcccagttagagattctgaag-tgtgtcaaatc--t-ttctgTGAATGTATTGTCTCTGGAAT-TGTGTGTAAATTCT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536042 225 + 121039945 aaacttatttt----gttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcgattctaggatttg-------------aaaaaaataa----------ccacttctccctgtctttacagagtggttttgcactgggaaattctttcaccagtcagcctagttggagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGTCTCTGGAAT-TGTGTGCAAATTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188138 218 - 169600520 aaacttattttaatagttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcaattctaggatttg-------------aaaaaaacaa----------ccacttctccctgtctttgcag-----------actgggaaaccccttcaccagtcagcccagttagagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGCCTCTGGAAT-TGTGTGTAAATTCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865724 218 - 171882078 aaacttattttaatagttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcaattctaggatttg-------------aaaaaaataa----------ccacttctccctgtctttgcag-----------actgggaaaccccttcaccagtcagcccagttagagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGCCTCTGGAAT-TGTGTGTAAATTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26938843 218 + 40200012 aaacttattttaatagttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcaattctaggatttg-------------aaaaaaataa----------ccacttctccctgtctttgcag-----------actgggaaaccccttcaccagtcagcccagttagagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGCCTCTGGAAT-TGTGTGTAAATTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384313 218 - 7633303 aaacttattttaatagttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcaattctaggatttg-------------aaaaaaataa----------ccacttctccctggctttgcag-----------actgggaaaccccttcaccagtcagcccagttagagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGCCTCTGGAAT-TGTGTGTAAACTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181552 220 + 58131712 aaacttattttaatagttccttttattgggccatgtttccctgtttccttgtgtgccttttcattttgtgttgcaattctaggatttg-------------aaaaaaataa----------ccacttctccctgtctttgcag-----------actgggaaaccccttcaccagtcagcccagttagagattctgagg-tgtgtcaaatctATATTCTGTGAATGTATTGTCTCTGGAAT-TGTGTGTAAATTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575180 218 - 2620224 aaccttattttaatagttccttttattgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgcaattctaggatttg-------------aaaaaaataa----------ccacttctccctggctttgcag-----------accgggaaaccccttcaccagtcagcccagttagagattctgagg-tgtgtcaaatc--tattctgtgaatgtaTTGCCTCTGGAAT-TGTGTGTAAATTCT i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989288 232 - 132174527 aaacttataat----gtttcttttattgggccatgtttccctgtttctctgtgtgccctttaattttgcgttgggattctaggatttg-------------aaaaacaaaa---aaaacaaccacctctccctgtctttacagactggttttgcacctggacatcctttcaccagtcagccctgttagagattctgagg-tgtgtcaaatc--tattttgtgaatgtgtcATCTCTGGAAT-TGTGTGTAAAGTCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10785865 246 + 21366645 aaacttat-at----gtttcttttattgggctatgtttccctgtttccttgtgtgccttttaattttgtgttgggattctaggatttggaaaaacaaaaacaaaaacaaaa-acaaaaaaaccacctctccctgtttttagagactggttttgcacctggacatcctttcaccagtcagccctgttagaaattctgagg-tgtgtcaaatc--tattttgtgAATGTATCATCTCTGGAAT-TGTGTGTAAAGTCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9301828 230 + 13033340 aaacttataat----gtttcttttactgggccatgtttccctgtttccttgtgtgccttttaattttgtgttgggtttctaggatttg-------------aaaaaaaaaa---aaaac--ccacatctccctgtctttagagactggttttgcacctggatatcctttcaccagtcagccctgttagagattctgagg-tgtgtcaaatc--tattttgtgAATTTATCATCTCTGGAAT-TGTGTGTAAAGTCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381073 235 - 11604778 aaacttttaat----gtttcttttattgggccatgtttccctgtttccttgtgtgccttttagttttgtgttgggattctaggattag-------------aaaaaaaaaaaataaaacaaccacctctccctgtctttacagactggttttgcacctggacatcctttcaccagtcagccctgttagagattctgagg-tgtgtcaaatc--tattttgtgAATGTATCATCTCTGGAAT-TGTGTGTAAAGTCT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800368 220 - 40214260 agatttatttc-----atccttttgttggggtgtgtttctctgtttcttcaaattctttatatctttgttttgggaacaaaacatttg-------------aaaaaactg-----------ctacttttcccagtctttacagattggctttgtccagggaaaggtctttaccattttg----gctagacattcttaggatctctcaaaca--t-ttctgTGGATACAATTTCTTTGGTTTATGCATTTTAATTCC i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=9676.000000 s hg38.chr14_KI270725v1_random 151608 2 + 172810 GA- s panTro5.chr1 126777498 2 + 228573443 TA- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389946 2 - 99763055 TA- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14033 2 + 21985 TA- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536267 2 + 121039945 TA- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188356 2 - 169600520 TA- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865942 2 - 171882078 TA- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939061 2 + 40200012 TA- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384531 2 - 7633303 TA- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181772 2 + 58131712 TA- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575398 2 - 2620224 TA- i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989520 2 - 132174527 TA- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10786111 2 + 21366645 TA- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302058 2 + 13033340 TA- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381308 2 - 11604778 CA- i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 88101 2 + 145891 CA- i tarSyr2.KE933570v1 N 0 I 1024 s canFam3.chr30 26800588 2 - 40214260 -AG i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=500177.000000 s hg38.chr14_KI270725v1_random 151610 54 + 172810 ---GAAAAATTTGCAGGT--CTTTCTTCAGGAGCATGTAATCTCTTGCTCTCTTTGTTA s panTro5.chr1 126777500 54 + 228573443 ---GAAAAATTTGCAGGT--CTTTCTTCAGGAGCATGTAATCTCTTGCTCTCTTTGTTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55389948 54 - 99763055 ---GAAAAATTTGCAGGT--CTTTCTTCAGGAGCTTGTAATCTCTTGCCGTCTTTGTTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14035 54 + 21985 ---GAAAAATTTGCAGGT--CTTTCTTCAGGAGCATGTAATCTCTTGCTCTCTTTGTTA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536269 54 + 121039945 ---GAAAAATTTGCAGGT--CTTTCTTCAGGAGCTTGTAATCTCTCGCTCTCTTTGTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188358 54 - 169600520 ---GAAAAATTTGCAGGA--CTTTCTTCAGGAGCTTGTAATCTCTTGCTCTCTTTGGTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865944 54 - 171882078 ---GAAAAATTTGCAGGA--CTTTCTTCAGGAGCTTGTAATCTCTTGCTCTCTTTGGTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939063 54 + 40200012 ---GAAAAATTTGCAGGA--CTTTCTTCAGGAGCTTGTAATCTCTTGCTCTCTTTGGTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384533 54 - 7633303 ---GAAAAATTTGCAGGA--CTTTCTTCAGGAGCTTGTAATCTCTTGCTCTCTTTGGTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181774 54 + 58131712 ---GAAAAATTTGCAGGA--CTTTCTTCAGGAGCCTGTAATCTCTTGCTCTCTTTGATA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575400 54 - 2620224 ---GAAAAATGTGCAGGA--CTTTCTTCAGGAGCTTGTAATCTCTTGCTCTCTTTGGTA i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989522 54 - 132174527 ---GAAAAATTTGCAGGT--CTTTCTTTAGGAGCTTGTAATCTCTTGCTGTCTTTGGTA i calJac3.chr10 C 0 I 126 s saiBol1.JH378136 10786113 54 + 21366645 ---GAAAATATTGCAGGT--CTTTCTTTAGGAGCTTGTAATCTCTTGCTGTCTTTGGTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302060 54 + 13033340 ---GAAAAAATTGCAGGT--CTTTCTTTAGGAGCTTGTAATCTCTTGCTGTCTTTGGTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381310 54 - 11604778 ---GAAAAATTTGCAGGT--CTTTCTTTAGGAGCTTGTAATCTCTTGCTGTCTTTGGTA i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800590 59 - 40214260 ATTAAGGGATTTACCAGTTCCTTTTGTCAGGAGCTCATAATCTCTTGCACCCTCTGGTG i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=1688134.000000 s hg38.chr14_KI270725v1_random 151664 189 + 172810 TCTATCTGTAGTACTGTAGGTTATCTGGAGTTGCTATAACCCCCT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATGAAGAGTA--------TCCggtcagacagaaaacagtccatcaggctgactgggaaaagttgaaattctggatgcacactccagctttttccttctccaaggggaagccagg-agttgag s panTro5.chr1 126777554 188 + 228573443 TCTATCTGTAGTACTATAGGTTATCTGGAATTGCTATAACCCCC--AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tccggtcagacagaaaacagtccgtcaggctgactgggaaaagttggaattctggatgcacactccagctttttccttctacaaggggaagccagg-agttcag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390002 189 - 99763055 TCTATCTGCAGTACTGTAGGTTCTCTGGAGTTGCTGTAATCCCCT-AGCTCTCTTTTGTTCTCAG----CAGTTCTCAG-ACATCAAGAGTA--------TCAGGTCAGACAGAAAACAGTCCCTCAGGCTGACTAGGAAAAGTTGGAATTCTGAATGCACACtccagctttttccttctccaaggagaagccagg-agttgag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14089 188 + 21985 TCTATCTGTAGTACTGTAGGTTATCTGGAGTTGCTATAACCCCCT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tccggtcagacagaaaacagtcc-tcaggctgactgggaaaagttggaattctggatgcacactccagctttttccttctccaaggggaagccagg-agttgag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536323 189 + 121039945 TCTATCTGTAGTACTGTAGGTTCTCTGGAGTTGCTGTAACCCCCT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcaggctgactgggaaaagttggaattctggatgcacactccagctttttccttctccaaggagaagccagg-agttgag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188412 189 - 169600520 TCTATCTGTAGTACTGTAGGTTCTCTGGAGTTGCTGTAACCCCTT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcaggctgactggggaaagttggaattctggatgcacactccagctttttccttctccaaggagaagccagg-agttgag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147865998 189 - 171882078 TCTATCTGTAGTACTGTAGGTTCTCTGGAGTTGCTGTAACCCCTT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcaggctgactggggaaagttggaattctggatgcacactccagctttttccttctccaaggagaagccagg-agttgag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939117 189 + 40200012 TCTATCTGTAGTACTGTAGGTACTCTGGAGTTGCTGTAACCCCTT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcaggctgactggggaaagttggaattctggatgcacactccagctttttccttctccaaggagaagccagg-agttgag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384587 188 - 7633303 TCTATCTGTAGTACTGTAGGTTCTCTGGAGTTGCTGTAACCCCTT-AGCTCTCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcaggctgactggggaaagttggaattctggatgcacactccagc-ttttccttctccaaggagaagccagg-agttgag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36181828 189 + 58131712 TCTATCTGTAGTACTGTAGGTTCTCTGGAGTTGCTGTAACCCCCT-AGCTCTTTTTTGTCCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcgggctgactggggaaagttggaattctggatgcacactccagctttttcctactccaaggagaagccagg-agttgag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575454 189 - 2620224 TCTATCTGTAGTACTGTAGGTTCTCTGGAGTTGCTGTAACCCCTT-AGCTCTCTTTTGTTCTCAG----CAGTTCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaaacagtccctcagactgactggggaaagttggaattctggatgcacactccagctttttccttctccaaggaaaagccagg-agttgag i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989702 188 - 132174527 CTTCTCTGTAGTACTACAGGTTCTCTGGAGTTGCTATGACCCCT--AGCTCTCTTCTGTTCTCAG----CAGTCCCCAG-ACATCAAGAGTA--------TCAGGTCAGACAGAAAGCAGTCTCTCAGCCTGACTGGGAAAAGTTGGAATTCTAGATGTGTGCTCCAGCTTTTTCCTTCTCCAATGAGAAACCAGG-AGTTGAG i calJac3.chr10 I 126 C 0 s saiBol1.JH378136 10786167 192 + 21366645 CTTCTCTGCAGTACTGCAGGTTCTCTGGAGTTGCTATAACCCCC--AGCTCTCTTTTGTTCTCAGTAGTCAGTCCCCAG-ACATCAAGACTA--------Tcaggtcagacagaaagcagtctctcagcctgactgggaaaagttggaattctagatgtgcactccagctttttccttctccaatgagaagccagg-agttgag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302114 188 + 13033340 CTTCTCTGCAGTACTGCAGGTTCTCTAGAGTTGCCATAACCCCC--AGCTATCTTTTGTTCTCAG----CAGTCCTCAG-ACATCAAGAGTA--------Tcaggtcagacagaaagcagtctctcagcctgactgggaaaagctggaattctagatgtgcactccagcttttaccttcttcagcgagaagccagg-agttgag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381364 188 - 11604778 CTTCTCTGTAGTACTGCAGGTTCTCTGGAGTTGCTCTAACCCCC--AGCTCTCTTTTGTTCTCAG----CAGTCCCCAG-ACATCAAGAGTA--------Tcaggtcagacagaaagcagtctctcagcctaactgggaaaagttggaattctagatgcacattccagctttttccttctcaaatgagaagccagg-agttgag i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800649 200 - 40214260 TCTGTTTGCAATAGTGCAAGTTATCCGGTGCTGTTGTAAACTTTTCACTTCTCTTTTGTTCTCAG----GGGACACCTGTGCCCCAAGTGAAACAAGAAGTCAAGTGCAACAGAAACCAGTCACTAGGCAGCTCCCACAAAAGCCTCAAAGTTGGATGTGTGCTCCACTCTTAGCTTCAGTCCTTGAGGGGCCAGGCCGCTGAG i canFam3.chr30 C 0 I 101 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=222270.000000 s hg38.chr14_KI270725v1_random 151853 28 + 172810 ggttttgtcccactcattgcatattgat s panTro5.chr1 126777742 28 + 228573443 ggttttctcccactcactgcatcttgat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390191 28 - 99763055 ggttttctcccacactttgcatattgat i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14277 28 + 21985 ggttttctcccactcattgcatattgat i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536512 28 + 121039945 gggtatctcccactcattgcatattgat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188601 28 - 169600520 ggttttctcccactcattgcatattgat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866187 28 - 171882078 ggttttctcccactcattgcatattgat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939306 28 + 40200012 ggttttctcccactcgttgcatattgat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384775 28 - 7633303 ggttttctcccactcgttgcatattgat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182017 28 + 58131712 ggttttctcccactcattgcatattgat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575643 28 - 2620224 ggttttctcccactcgttgcatattgat i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989890 28 - 132174527 GGTTTTCTCCTACTCATTCCATAATGAT i calJac3.chr10 C 0 I 22 s saiBol1.JH378136 10786359 28 + 21366645 ggttttctcctACTCATTCCATAATGAT i saiBol1.JH378136 C 0 I 25 s cebCap1.NW_016107324v1 9302302 28 + 13033340 ggttttctcctactcattcCACGATGAT i cebCap1.NW_016107324v1 C 0 I 22 s aotNan1.NW_018501505v1 6381552 28 - 11604778 agttttctcctattcattccataatgat i aotNan1.NW_018501505v1 C 0 I 22 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26800849 101 - 40214260 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=147883.000000 s hg38.chr14_KI270725v1_random 151881 21 + 172810 ccagggaaggatgatatgata s panTro5.chr1 126777770 21 + 228573443 ccagggaaggatggtacgata i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390219 21 - 99763055 ccagggaaggagagtatgata i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14305 21 + 21985 ccagggaaggatggtatgata i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536540 21 + 121039945 ccagggaaggagagtatgata i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188629 21 - 169600520 ccaggcaaggagagtatgata i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866215 21 - 171882078 ccaggcaaggagagtatgata i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939334 21 + 40200012 ccaggcaaggagagtatgata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384803 21 - 7633303 ccaggcaaggagagtatgata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182045 21 + 58131712 ccagcgaaggagagtatgata i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575671 21 - 2620224 ccaggcaaggagagtatgata i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989940 21 - 132174527 CCAGGGAGGGAGAGTATGATA i calJac3.chr10 I 22 C 0 s saiBol1.JH378136 10786412 21 + 21366645 CCTGGGAGGGAGAGTATGATA i saiBol1.JH378136 I 25 C 0 s cebCap1.NW_016107324v1 9302352 21 + 13033340 CCAGGGAGGGAGAGTATGATA i cebCap1.NW_016107324v1 I 22 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26800849 101 - 40214260 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e otoGar3.GL873530 36210217 0 - 36342412 C e aotNan1.NW_018501505v1 6381580 22 - 11604778 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=588593.000000 s hg38.chr14_KI270725v1_random 151902 67 + 172810 agtgaatgtatgctaacccaaacttcctcaactcatttattcttaatatccccaacctggaaagctt s panTro5.chr1 126777791 67 + 228573443 agtgaatgtatgctaacccaaacttcctcaactcatttgttcttaatatccccaacctggaaagctt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390240 67 - 99763055 agtgaatgtatgctaacccaaactgcctcaactcatttgttcttaatatacccaacctggaaagctt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14326 67 + 21985 agtgaatgtatgctaacccaaactgcctcaactcatttgttcttaatatccccaacctggaaagctt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536561 67 + 121039945 agtgaatgtatgctaacccaaactgcctcaactcgtttgttcttaatatccccaacctggaaagctt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188650 67 - 169600520 agtgaatgtatgctaacccaaactgcctcaacacatttgttcttaatatccccaacctggaaagctt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866236 67 - 171882078 agtgaatgtatgctaacccaaactgcctcaacacatttgttcttaatatccccaacctggaaagctt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939355 67 + 40200012 agtgaatgtatgctaacccaaactgcctcaacgcatttgttcttaatatccccaacctggaaagctt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384824 67 - 7633303 agtgaatgtatgctaacccaaactgcctcaacgcatttgttcttaatatctccaacctggaaagctt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182066 66 + 58131712 agtgaatgtatgctaacccaaactgcctcaacgcatttgttcttaatatccccaacctgg-aagctt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575692 67 - 2620224 agtgaatgtatgctaacccaaactgcctcaacgcatttgttcttaatatccccaacctggaaagctt i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107989961 67 - 132174527 AGCGAATGCATGCTAACCCAAACTGCCTCAACTCATTTGTTCTCAATATCCCTAACCTGGAAAGCTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10786433 66 + 21366645 AGCAAATGCATG-GAACCCAAACTGCCTCAACTAATTTGTTCTCAATATCCCCAACCTGGAAAGTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302373 67 + 13033340 AGCAAATGCATGCAAACCCAAACTGCCTCAAATCATTCGTTCTCAATATCCCCAACCTGGAAAGCTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381602 67 - 11604778 agcgaatgcatgctaacccaaactgcctcaactcatttgttctcaatatccccaacctggaaagctt i aotNan1.NW_018501505v1 I 22 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e canFam3.chr30 26800849 101 - 40214260 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=1457524.000000 s hg38.chr14_KI270725v1_random 151969 175 + 172810 tcctgtta--atgcttaaattcaggcaagacagaaaacaatcacttggcaactcccctg---aagtctgaacactgaa-----------------------tgtgtgttgcagtattctctttcacttctgtgggggaatcaggaactgtagagtattctccCAAACTTGTTATACTGAGTCACCGGAGG-AACGATGGTGATT s panTro5.chr1 126777858 175 + 228573443 tcctgtta--gcgcttaaattcaggcaagacagaaaacaatcacttggcaactcttctg---aagtctgaacactgaa-----------------------tatgtgtttcagtattctctttcacttctgtgggggaatcaggaactgtagagtattctccCAACCTTGTTATACTGAGTCACAGGAGG-AATGATGGTGATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390307 175 - 99763055 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacttggcaactcccctg---aagtctgaacattgaa-----------------------tgtgtgtttcagtattctctttcactcctttgggggaatcaggaactgtagagtattctcccaatctcgttatactgagtcacaggagg-aatgaTGGTGATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14393 174 + 21985 tcctgtta--gcgcttaaattcaggcaagacagaaaacaatcacttggcaactcccctg---aagtctgaacactgaa-----------------------tgtgtgtt-cagtattctctttcacttctgtgggggaatcaggaactgtagagtattctcccaatcttgttatactgagtcacaggagg-aatgaTGGTGATT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536628 175 + 121039945 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacttggcaactcccctg---aagtctgaacattgaa-----------------------tgtgtgtttcagtattctctttcactcctttggggaaatcaggaactgTAGAGTATTCTGCCAATCTTGTTTTACTGAGTCACAGGAGG-AATGATGGTGATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188717 175 - 169600520 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacgtggcagctcccctg---aagtctgaacatttaa-----------------------tgtgtgtttcggtattctctttcactcctttgggggaatcaggaactgtagagtattctccctATCTTGTTATACTAAATCACAGGAGG-AATGATGGTGATT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866303 175 - 171882078 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacgtggcaactcccctg---aagtctgaacatttaa-----------------------tgtgtgtttcggtattctctttcactcctttgggggaatcaggaactgtagagtattctccctATCTTGTTATACTAAATCACAGGAGG-AATGATGGTGATT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939422 175 + 40200012 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacgtggcaactcccctg---aagtctgaacatttaa-----------------------tgtgtgtttcggtattctctttcactcctttgggggaatcaggaactgtagagtattctccctATCTTGTTATACTAAATCACAGGAGG-AATGATGGTGATT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4384891 175 - 7633303 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacgtggcaactcccctg---aagtctgaacatttaa-----------------------tgtgtgtttcggtattctctttcactcctttgggggaatcaggaactgtagagtattctccCTATCTTGTTATACTAAATCACAGGAGG-AATAATGGTGATT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182132 175 + 58131712 tcctgtta--gcacctaaattcaggcaagacagaaaacaatcacgtggcaactcccttg---aagtctgaacattcaa-----------------------tgtgtgtttcggtattctttttcactcctttgggggaatcaggaactgtagagtattctccctATCCTGTTATACTGAATCACAGGAGG-AGTGATGGTGATT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575759 175 - 2620224 tcctgtta--gcacttaaattcaggcaagacagaaaacaatcacgtggcaactcccctg---aagtctgaacatttaa-----------------------tgtgtgtttcggtattctctttcacacctttgggggaatcaggaactgcagagtattctccctATCTTGTTATACTAAATCACAGGAGG-AATGATGGTGATT i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107990028 170 - 132174527 TCCTGTTA--GCATTTAAATTcaggcaagacagaaaacaatcacttgacaactc-cctg---aagtctgaacattaaa-----------------------tgtgtgtttcattattctttttcacttttttggggaaatcaggaactgt-gagtattctcccaatctcgttatgccgagtcaagggaggaaa----ggtgagt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10786499 174 + 21366645 TCCTGTTA--GCATTTAAATTcaggcaagacagaaaacaatcacttgacaactc-cctg---aagtctgaacattaag-----------------------tgtgtgtttcagtgttcactttcactcctttggggaaatcaggaactgt-gagtgttctcccaatctcgttatgccgagtcaagggaggaaatgatggcgagt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302440 174 + 13033340 TCCTGTTA--GCATTTAAATTcaggcaagacagaaaacaaccacttgacaactc-cctg---aagtctgaacattaaa-----------------------tgtgcgtttcagtattctctttcactcctttggggaaatcaggaactgt-gagtattctcccaatctcgttatgccgagtcaagggaggaaatgatgtcgagt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381669 171 - 11604778 tcctgtta--gcatttaaattcaggcaagacagaaaacaatcactt---aactc-cctg---aagtctgaacattaaa-----------------------tgtgtgtttcagtattctctttcactcctttggggaaatcaggaactgt-gagtattctcccaatctcgttatgccgagtaaagggaggaaatgatggcgagt i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26800950 196 - 40214260 tctcatcagtgcacttaaat--agacaaaacagaaaccagtcttttcagtagtc-cctggaaaaggtggaacattggacacatacatacaacacacacacgtgcgcacacacacacgttatttccatcccagggggaatccaggacttgg-gagttttcttctactcattccacattgggtca---gagg-gactacagtgagt i canFam3.chr30 I 101 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e otoGar3.GL873530 36210217 0 - 36342412 C e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=2989774.000000 s hg38.chr14_KI270725v1_random 152144 306 + 172810 GAGTGACAGTCCAAACTGTGGCTT----TATCAGCAGGCATGCAATCTGGCATCCTTTCCTGTTAGCACTTAGATTCAGGGTAGATAGGTGCTAG---------------Tgccctcccaaaaagtcaaaatgtt-ggacgtatggtctagacttttctttctctccctagagatgagctgggagtttggagctttctctc--cattgcgttgtac--tgctgagggaggatg----------agtgagtgcaacaaatttacctgctggttttgatgtgcctggcttgaagcctaccagggaatccagagtctttaaattctcctctgaacttttcacg s panTro5.chr1 126778033 306 + 228573443 GAGTGACAGTCCAAACTGTGCCTT----TATCAGCAGGCATGCAATCTGGCATCCTTTCCTTTTAGTACTTAGATTCAGGGTAGATAGGTGCTAG---------------Tgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttcgttctctccctagagatgagctgggagtttggagctttctctc--cattgcgttgtac--cactgagggatgatg----------agagagtgcaacaaatttacctgctggtttagatgtgcctggcttgaagcctacccgggaatccagagtcgttaaattctcctctgtacttttcaca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390482 321 - 99763055 GAGTGACAGTCCAAACTGTGGCTT----TATCAGCAGTCATGCAATCTGGCATCCTTTcctgttagcacttagattcagggtagataggtgctagttccttgggcagccctgccatcccaaaaagtcaaaatgtt-cgacatatgatctagacttttctttctctccctagagataagctgggagtttggagctttctctc--tattgcgttgtac--tgctgagggaggatg----------agtgagtgccacaaatatacctgctggtttagatgtgcctggcttgaagcctaccagggaatccagagtctttaaattcgtttctgtacttttcaca i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14567 306 + 21985 GAGTGACAGTCCAAACTGTGACTT----TATCAGCAGGCATGCAATCTGGCATCCTTTCCTGTTAGCACTTAGATTCAGGGTAGATAGGTGCTAG---------------Tgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagagatgagctgggagtttggagctttctctc--cattgcgttgtac--tcctgagggaggatg----------agtgagtgcaacaaatttacctgctggtttagatgtgcctggcttgaagcctaccagggaatccagagtctttaaattcgcctctgaacttttcaca i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53536803 320 + 121039945 GAGTGACAGTCCAAACGGTGGCTT----TATCAGCAGGCATGCAATCTGGCAT-CTTTcctgttagcacttagattcagggtagataggtgctagttccttgggcagccctgccctcctaaaaagtcaaaatgtt-cgacatatggtctagacttttctttctctccctagagataagctgggagtttggagctttctctc--tattgcgttgtac--tgttgagggaggatg----------agtgagtgccacaaatctacctgctggtttagatgtgcctggcttgaagcctaccagggaatccagggtctttaaattcgtttctgtactttccaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146188892 321 - 169600520 GAGTGGCAGTTCAAACTGTGGCTT----TTTCAGCAGGCATGCAGTCTGGTATCCTTTCCTGTTAGCACTTAGATTCAGAGTagataggtgctagttccttgggcagccctgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagcgataagctgggaggttggaactttctctc--cattgcattgtac--tgttgagggaggatg----------agtgagtgccacaaatttacctgctggtttagatgtgcctgacttgaagcctaccagggaatccagaatctttaaattagtttctgtacttttcaca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866478 321 - 171882078 GAGTGGCAGTTCAAACTGTGGCTT----TTTCAGCAGGCATGCAGTCTGGTATCCTTTCCTGTTAGCACTTAGATTCAGAGTagataggtgctagttccttgggcagccctgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagcgataagctgggaggttggaactttctctc--cattgcattgtac--tgttgagggaggatg----------agtgagtgccacaaatttacctgctggtttagatgtgcctgacttgaagcctaccagggaatccagaatctttaaattagtttctgtacttttcaca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939597 321 + 40200012 GAGTGGCAGTTCAAACTGTGGCTT----TTTCAGCAGGCATGCAGTCTGGTATCCTTTCCTGTTAGCACTTAGATTCAGAGTagataggtgctagttccttgggcagccctgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagcgataagctgggagtttggaactttctctc--cattgcattgtac--tgttgagggaggatg----------agtgagtgccacaaatttacctgctggtttagatgtgcctgacttgaagcctaccagggaatccagaatctttaaattagtttctgtacttttcaca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385066 321 - 7633303 GAGTGACAGTTCAAACTGTGGCTT----TTTCAGCAGGCATGCAGTCTGGTATCCTTTCCTGTTAGCACTTAGATTCAGAGTagataggtgctagttccttgggcagccctgccctccccaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagcgataagctgggagtttggaactttctctc--cattgcattgtac--tgttgagggaggatg----------agtgagtgccacaaatttacctgctggtttagatgtgcctgacttgaagcctaccagggaatccagagtctttaaattagtttctgtacttttcaca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182307 321 + 58131712 GAGTGACAGTTCAAACTGTGGCTT----TTTCAGCAGGCGTGCAGTCTGGCATCCTTTcctgttagcacttagattcagggtagataggtgctagttccttgggcagccctgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagcgataagctgggagtttggaactttctgtc--cattgcgttgtac--tgttgagggaggatg----------agtgagtgccacaaatttacctgctggtttagatgtgcctggcttgaagcctaccggggaatccagagtctttaaattcgtttctgtacttttcaca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2575934 323 - 2620224 GAGTGACAGTTCAAACTGTGGCTT----TTTCAGCAGGCATGCAGTCTGGTATCCTTTCCTGTTAGCACTTAGATTCAGAGTagataggtgctagttccttgggcagccctgccctcccaaaaagtcaaaatgtt-ggacatatggtctagacttttctttctctccctagcgataagctgggagtttggaactttctctccacattgcattgtac--tgttgagggaggatg----------agtgagtgccacaaatttacctgctggtttagatgtgcctgacttgaagcctaccagggaatccagagtctttaaattagtttctgtacttttcaca i manLeu1.NW_012108674v1 C 0 C 0 s calJac3.chr10 107990198 310 - 132174527 gagtgACAGTCCAAACTGTGGCTT-TACTATCAGCAGGCATGCAATCTGGAATCCTTTCCTGTTAGCGCTTAGATTCAGAGAAGATAGGTGCTAGTCCCTTGGGCAGCCCTGCCCTCCCAAAAAGTCATAATGTT-GGACATGTTGTCTAGACTTCTCTTTATCTCCCTAGAGATAAGCTGGGAGTTTGGAGCTTTCTCTC--CATTGCATTGTAT--TGCTgagggaggatg----------agtgagtgcctcaaatttacccactggtttaggtgtgcctggcttcaagcttaccagcaaatccagag--------------tctggacttttcaca i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10786673 324 + 21366645 gagtgacagtccaaactgtggctt-tattatcagcaggaatgcaatctggcatcctttcctgttagtgcttagattcagagaagataggtgctagtcccttgggcagccctgccctcccagaaagtcataatgtt-ggacatgttgtctagacttctctttatctccctagagataagctaggagtttggagctttctctc--cattgcattgtac--tgctgagggaggatg----------agtgagtgccgcaaatttacccactgttttaggtgtgcctggcttcaagcttaccagtgaatccagagtctttaaattcatttctggacttttcaca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302614 321 + 13033340 gagtgacagtccAACCTGTGGCTT-TATTATCAGCAGGCATGAAATCTGGCATCCTTTcctgttagcacttagattcagggaagataggtgctagtcccttgggcagccctgccctcccaaaaagtcaaaatgtt-ggacatgttgtctagacttctctttatctccctagagataagctgggagtttggagctttctctc--cattgcattgtac--tgctgagggaggatg----------aggaagtgccacaaatttacccactggtttaggtgtgcctggcttcaagcttaccagcgaatcc--agtctttaaattcat-tctagacttttcaca i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6381840 325 - 11604778 gagtgacagtccaaactgtggctt-tattatcagcaggcatgcaatctggcatcctttcctcttagcacttagattcagggaagataggtgctagtcccttgggcagccctgccctcccaaaaagtcataatgttgggacatgttgtctagacttctctttatctccctagagataagctgggagtttggagctttctctc--cattgcattgtac--tgctgagggaggatg----------attgagtgccacaaatttacccactggtttaggtgtgcctggcttcaagcttaccagcgaatccagagtctttaaattcatttctggacttttcaca i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36210217 308 - 36342412 gACTGTTAGTTCAATTTAtgccct-tattctcagcagtcccccaatctggcaccctgtcatgtcagtgctaagctacagggaagatagaagccagtctcttgggcagct-tatgcccccaaaatgtcagaatgct-ggacataccattcagacttatctttctccctccagagataagctatgagcttggagatttatccc--aattgcatcaacccatgctgaggagagAGG----------AATAAATGCCACAGATTCACAGATGGGTTCAGATGCACTTGATTTCAACCTCACCAGTACATCACGAGTCTT-----------------TTTTCACA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26801146 326 - 40214260 gaatgc---tccaaaccattgcctttgttttcagtggtccccca-ccttatgctttttcctgtcagtaattagatgcaggcaagacagaagccaatctcttgggaa-----gtccctccaaaaactcagattgtt-ggatatatgatccatatttctctttttatcctggaagggaagccaggagttgggagcttcctttc--acttgtattgtgc--tatgctgggaagaaggactatagctaatgggtgtcataatttttctcaccagctttgatgctcctaattcagaatttgctagggttgcagaagcatcttaactgatttctggatttttcaca i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e tarSyr2.KE933570v1 88103 1024 + 145891 I e colAng1.NW_012121598v1 8401215 2073 - 10629787 I a score=1007787.000000 s hg38.chr14_KI270725v1_random 152450 99 + 172810 aaggggatttatctgtgtattattatcgagctggtgtctccttg----------------gagaggagggtggaggggctttgaggctttctatttcatcatcttgctggtatcC s panTro5.chr1 126778339 99 + 228573443 aaggagatttatctgtgtattattgtcgagctgctgtctccttg----------------gagaggagggtggaggggctttgaggttttctattgcatcatcttgctggtgtcC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390803 99 - 99763055 aaggggatttatctgtgtattattgtcgagctggtgtctccttg----------------gacaggagggtagaggggctttgaggctttctatttcatcatcttgctggtgtcC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14873 99 + 21985 aaggggatttatctgtgtattattgtcgagctggtgtctccttg----------------gagaggagggtggaggggctttgaggctttctatttcatcatcttgctggtgtcC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537123 99 + 121039945 aaggggatttatctgtgtagtattgtcgagctggtgtctccttg----------------gagaggagggtggaggggctttgaggctttatatttcatcatcttgctggtgtcC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189213 99 - 169600520 aaggggatttatctctgtattattgttgagctggtgtctcctgg----------------gagagaagggtggaggggctttgaggcttcctattccatcatcttgctggtgtcC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866799 99 - 171882078 aaggggatttatctctgtattattgttgagctggtgtctcctgg----------------gagagaagggtggaggggctttgaggcttcctattccatcatcttgctggtgtcC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26939918 94 + 40200012 aaggggatttatctctgtattattgttgagctggtgtctcctg---------------------gaagggtggaggggctttgaggcttcctattccatcatcttgctggtgtcC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385387 99 - 7633303 aaggggatttatctctgtattattgttgagctggtgtctcctgg----------------gagagaagggtggaggggctttgaggcttcctactccatcatcttgctggtgtcC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182628 99 + 58131712 aaggggatttatctctgtattattgtcgagctggtgtctcctgg----------------gagagaagggtggaggggctttgaggcttcctattccgtcatcctgctggtgtcC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576257 99 - 2620224 aaggggatttatctctgtattattgttgagctggtgtctcctgg----------------gagagaagggtggaggggctttgaggcttcctattccatcatcttgctggtgtcC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403288 87 - 10629787 AAGGGGATTTATCTCTGTATTATTGTCAAGCTGGTGTCTCCTG----------------------------GGAGGGGCTTTGAGGCTTCCTATTCCATCATCTTGCTGGTGTCC i colAng1.NW_012121598v1 I 2073 C 0 s calJac3.chr10 107990508 99 - 132174527 gagaggatttatctctgtattactgtcgagttggtgtctccttg----------------gagaggagggtgaaggggctttaagtctttctattccataatcttgctgatgccC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10786997 99 + 21366645 aagaggatttatctctttattattgtcgagttggtgtttcctag----------------gaaaggagggtgaaggggctttgagtcttcctattccatcatcttgctgatgtcC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9302935 99 + 13033340 aagaggatttatctctgtattattgtcgagttggtgtctccttg----------------gagaggagggtgaaggggctttgagtcttcctattccatcatcttgctgatgtAC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382165 99 - 11604778 aagaggatttatctctgtattattgtcgagttggtgtctccttg----------------gagatgagggtgaaggggctttgagtcttcctattccatcatcttgctgatgtcC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36210525 106 - 36342412 AAGGGCACTGGTCTGTATATTTTTTCTGAGTTGGTGTCTCTATGACACCAGCCTTCTATAAGAAGGTGTGTACAGGGCTTTTGAG---------TCCATTATCTTGTTGATGACC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26801472 87 - 40214260 aaaggaatcagtctatgt--tgctgtggagtcaatgtctctgtg----------------gggaaaata----------tccgggtttttttgttcctctatcttgctggtgtcT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e dasNov3.JH579377 1061211 1362 + 2868945 I e tarSyr2.KE933570v1 88103 1024 + 145891 I a score=627372.000000 s hg38.chr14_KI270725v1_random 152549 55 + 172810 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCACATT----------GTTGGAGAATGGATCCTG s panTro5.chr1 126778438 55 + 228573443 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCCCATT----------GTTGGAGAATGGATCCTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390902 55 - 99763055 TGACAGGAATTTTAAGCTGGGCTCCT-TTCCCCACATT----------GTTGGAGAATGGCTCCTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 14972 55 + 21985 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCACATT----------GTTGGAGAATGGATCCTG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537222 55 + 121039945 TGACAGGAATTTTAAGCTGGGCTCCT-TTCCCTGCATT----------GTTGGAGAATGGATCTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189312 65 - 169600520 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATTTTGGATCCTGGCTGGAGAATGGATCCTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866898 65 - 171882078 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATTTTGGATCCTGGCTGGAGAATGGATCCTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940012 65 + 40200012 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATTTTGGATCCTGGCTGGAGAATGGATCCTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385486 65 - 7633303 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATTTTGGATCCTGGCTGGAGAATGGATCCTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182727 65 + 58131712 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATTTTGGATCCTGGCTGGAGAATGGATCCTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576356 65 - 2620224 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATTTTGGATCCTGGCTGGAGAATGGATCCTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403375 55 - 10629787 TGACAGGAATTTTAAACTGGGCTCCT-TTCCCCGCATT----------GTTGGAGAATGGATCCTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990607 55 - 132174527 TGACAGGAATTTTAAACTGGGCTTCT-TTCCCCACATT----------GCTGGAGTATGAATCCTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787096 55 + 21366645 TGACAGGAATTTTAAACTGGGCTTCT-TTCCCTACATT----------GCTGGAGAATGAATCCTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303034 55 + 13033340 TGACAGGAATTTTAAACTGGGCTTCT-TTCCCGACATT----------GCTGGAGAATGAATCCTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382264 51 - 11604778 TGACAGAAATTTTAAACTGGGCTTCT-TTCCCCACATT----------GCTGGAGAATGAAT---- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36210631 56 - 36342412 TGATGAGAATATTAAACCTGGCTATTCTTCCTCTTCTT----------GTTGGAAAATAGAATGTG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26801559 55 - 40214260 GGACAGAAATTTTTAACCTGGCCCTC-CTCTACTCCTG----------GTTGGAGAATGGACGTTG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1062573 54 + 2868945 tggcagcaatttttaacctggctcct-cactcc-cact----------gttagagaatagtccctg i dasNov3.JH579377 I 1362 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I e tarSyr2.KE933570v1 88103 1024 + 145891 I a score=109837.000000 s hg38.chr14_KI270725v1_random 152604 11 + 172810 GCTGGTTATAG s panTro5.chr1 126778493 11 + 228573443 GCTGATTATAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390957 11 - 99763055 GCTGATTATAG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15027 11 + 21985 GCTGATTATAG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537277 11 + 121039945 GCTGATTATAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189377 11 - 169600520 GCTGATTACAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866963 11 - 171882078 GCTGATTACAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940077 11 + 40200012 GCTGATTACAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385551 11 - 7633303 GCTGATTACAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182792 11 + 58131712 GCTGATTACAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576421 11 - 2620224 GCTGATTACAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403430 11 - 10629787 GCTGATTACAG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990662 11 - 132174527 GCTGATTATAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787151 11 + 21366645 GCTGATTACAG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303089 11 + 13033340 GCTGATTACAG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382315 10 - 11604778 -ATGAGTATAG i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 89127 11 + 145891 TCGGGTAGCAG i tarSyr2.KE933570v1 I 1024 I 1554 s otoGar3.GL873530 36210687 8 - 36342412 ---GAGTATAG i otoGar3.GL873530 C 0 I 3 s canFam3.chr30 26801614 11 - 40214260 GTATATAAGAG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1062627 1 + 2868945 ----------g i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58108961 1174 - 182113224 I a score=788821.000000 s hg38.chr14_KI270725v1_random 152615 66 + 172810 GTACTCATGAA---ATA----CT---GGATAAATTATTATTTATCATTTACTTACAAAAACTTAAAATTTTTATTA s panTro5.chr1 126778504 66 + 228573443 GTACTCATGAA---ATA----CT---GGATAAATTATTATTTATCGTTTGCTTACAAATACTTAAAAATTTTATTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55390968 66 - 99763055 GTACTCATAAA---ATA----CT---GGGTAAAttattatttattatttacttacaaatatttaaaatttGTATTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15038 65 + 21985 GTACTCATGAA---ATA----CT---GGATAAATTATTATTTATCATTTACTTACAAATA-TTAAAATTTTTATTA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537288 66 + 121039945 ATACTCATGAA---ATA----TT---GGGTAAATTATTATTTATCATTTACTTAcaaatatttaaaatttttatta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189388 66 - 169600520 GTACTAATGAA---ATA----CT---GGGTAAATTATTATTTATCATTTACTTACAAATATTTACAGTTTTTATTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147866974 66 - 171882078 GTACTAATGAA---ATA----CT---GGGTAAATTATTATTTATCATTTACTTACAAATATTTACAGTTTTTATTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940088 66 + 40200012 GTACTAATGAA---ATA----CT---GGGTAAATTATTATTTATCAATTACTTACAAATATTTACAGTTTTTATTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385562 66 - 7633303 GTACTAATGAA---ATA----CT---GGGTAAATTATTATTTATCATTTACTTACAAATATTTACAGTTTTTATTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182803 66 + 58131712 GTACTAATGAA---ATA----CT---GGGTAAATTATTATTTATCATTTACTTACAAATATTTACAGTTTTTATTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576432 66 - 2620224 GTACTAATGAA---ATA----CT---GGGTAAATTATTATTTATCATTTACTTACAAATATTTACAGTTTTTATTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403441 66 - 10629787 GTACGAATGAA---ATA----CT---GGGTAAATTATTATTTATCATTTACTTACAAATATTTACAGTTTTTATTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990673 67 - 132174527 GTACTCATGAA---ATG----CTG--GGGTAAATTATTCTTTATCATTTCCTTACaaatatttaaaatttttatta i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787162 66 + 21366645 GTACTCATGAA---ATG----CT---GGGTAAATTATTCTTTATCATTTCCTTACaaatattttaaatttttatta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303100 66 + 13033340 GTACTCATGAA---ATG----CT---GGGTAAATTATTCTTTATCATTTCCTTACAAATATTTTAATTTTTTATTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382325 66 - 11604778 GTACTCATGAA---ATG----CT---GGGTAAATTATTCTTTATCATTTCCTTACAAATATTTTAAATTTTTATTA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36210698 66 - 36342412 GCAGCCATGAA---ATA----TT---GGGTAAACCATCatttattatttaattacaattgttttaaatttttatta i otoGar3.GL873530 I 3 I 433 s mm10.chr2 58110135 68 - 182113224 GTGCTCAGGAA---GTA----TTTGCTGGCAGCTTTTTGTTTGTCATTTGATTACAAAAAAATTAAATTTCCCTA- i mm10.chr2 I 1174 C 0 s canFam3.chr30 26801625 69 - 40214260 ACACCCATGAATAGTTG----AT---GGAGGAATTATTATTTGTCATTGATTTCCAAACTTTAAAAATTttcatta i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1062628 69 + 2868945 -tactcataaa---atatctgtt---gcatgaatTATTATTTATCATTTATTTCTAAGCATTTTAAATTttcatta i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=62398.000000 s hg38.chr14_KI270725v1_random 152681 4 + 172810 TGGG s panTro5.chr1 126778570 4 + 228573443 TGGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391034 4 - 99763055 TGGG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15103 4 + 21985 TGGG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537354 4 + 121039945 tgga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189454 4 - 169600520 TGGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867040 4 - 171882078 TGGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940154 4 + 40200012 TGGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385628 4 - 7633303 TGGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182869 4 + 58131712 TGGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576498 4 - 2620224 TGGG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403507 4 - 10629787 TGGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990740 4 - 132174527 tGGG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787228 4 + 21366645 tGGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303166 4 + 13033340 TGGG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382391 4 - 11604778 TGGG i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58110203 4 - 182113224 TGGA i mm10.chr2 C 0 C 0 s canFam3.chr30 26801694 4 - 40214260 tggg i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1062697 4 + 2868945 tggg i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36210764 433 - 36342412 I a score=1149677.000000 s hg38.chr14_KI270725v1_random 152685 101 + 172810 AAATAA-GTTTttaatcactattaaagtttgctgaagcactaattca--ttactg--tgaaaagtggggaggggtataaaaatcaag---------catttgtctacttatcttg s panTro5.chr1 126778574 101 + 228573443 AAATAA-GTTTTTAATCTCTAttaaagtttgttgaagcactaattca--ttactg--tgaaaagtgtggaggggactaaaaatcaag---------catttgtctacttatcttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391038 101 - 99763055 AAATAA-GTTTttaatcactattaaagtttgttgaagcactaattca--ttactg--tgaaaagtagggaggggaataaaaatcaag---------catttgtctatttgtcttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15107 101 + 21985 AAATAA-GTTTttaatcactattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcaag---------catttgtctacttatcttg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537358 101 + 121039945 aaataa-gtttttaatcactgttaaagtttgttgaagcactaattca--ttactg--tgaaaagtagggaggggaataaaaatcaag---------catgtgtttatttatcttg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189458 97 - 169600520 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcgaa---------cgtttgtcta----tctca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867044 97 - 171882078 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcgaa---------cgtttgtcta----tctca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940158 106 + 40200012 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcgaaaataaaaatcgtttgtcta----tctca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385632 97 - 7633303 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcgaa---------catttgtcta----tctcg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182873 97 + 58131712 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaagcaaa---------catttgtcta----tctcg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576502 97 - 2620224 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcgaa---------catttgtcta----tctcg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403511 97 - 10629787 AAATAA-GTTTttaatcaccattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggggaataaaaatcaag---------catttgtcta----tcttg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990744 101 - 132174527 AAATAA-CTTTTTAATCAGTATTAAAGTTtgttgaagcactaattca--ttagta--tgaaaagtggggaagagaataaaaatcaag---------catttgtctatttatcttg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787232 101 + 21366645 AAATAA-CTTTTAAATCAGTAttaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggagaataaaaatcaag---------catttttctatttatcttg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303170 101 + 13033340 aaataa-ctttttaatcagtattaaagtttgttgaagcactaattca--ttactg--tgaaaagtggggaggagaataaaaatcaag---------catttttctatttattttg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382395 101 - 11604778 aaataa-ctttttaatcagtattaaagtttgttgaagcactaattaa--ttactg--tgaaaagtggggaggagaacaaaaatcaag---------catttgtctatttatcttg i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211197 100 - 36342412 aaatag-atttttaataactgttaaagtttgctgaagcacgagttca--tccctt--taaaaggc-tggtggagaattgaagtcaag---------cttttatctattcatttta i otoGar3.GL873530 I 433 C 0 s mm10.chr2 58110207 100 - 182113224 -AATAATGATTTTAATCATTGATAAAGGCTATTGAA-----AATTCATTTTGCTGCATAGAAAACAGATTAAAGTATCAAAATCAAT---------CATTTATCTATTTATCATG i mm10.chr2 C 0 I 1 s canFam3.chr30 26801698 90 - 40214260 aaataa-ttttttgatcactagtgaaagttgttgaatcaccaattaa--ttactt--tcagaagggagt----------aatttaag---------gatttatcttgttttttt- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1062701 86 + 2868945 aaacaa-ttttctgattgctgttaaaggtcattggagcactaactca--ttactt--tgaaatgtggg---------aaatatcagg---------catgtttt------tcttg i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5816116 1396 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=1098.000000 s hg38.chr14_KI270725v1_random 152786 1 + 172810 -t s panTro5.chr1 126778675 1 + 228573443 -c i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391139 1 - 99763055 -c i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5817512 1 + 72422247 -c i ponAbe2.chrUn I 1396 I 262 s nomLeu3.chr6 53537459 1 + 121039945 -c i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189555 1 - 169600520 -c i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867141 1 - 171882078 -c i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940264 1 + 40200012 -c i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385729 1 - 7633303 -c i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182970 1 + 58131712 -c i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576599 1 - 2620224 -c i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403608 1 - 10629787 -c i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990845 1 - 132174527 -c i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787333 1 + 21366645 -c i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303271 1 + 13033340 -c i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382496 1 - 11604778 -c i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211297 1 - 36342412 -t i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26801788 1 - 40214260 -t i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1062787 1 + 2868945 a- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e gorGor5.CYUI01005903v1 15208 0 + 21985 C e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110307 1 - 182113224 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=838486.000000 s hg38.chr14_KI270725v1_random 152787 63 + 172810 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag s panTro5.chr1 126778676 63 + 228573443 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391140 63 - 99763055 ttttcccgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttatgaggaa---atgttcttttaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15208 63 + 21985 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537460 63 + 121039945 ttttccggt--------------------ccaaattgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189556 63 - 169600520 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867142 63 - 171882078 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940265 63 + 40200012 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385730 63 - 7633303 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacaattgggaggaa---atgttcttttag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36182971 63 + 58131712 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggta---atgttcttttag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576600 63 - 2620224 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403609 63 - 10629787 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacatttgggaggaa---atgttcttttag i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990846 61 - 132174527 ttttcctgt--------------------ccaaac--tgttttggtgtaatc-aatacacattagggaggaa---atgttcttttag i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787334 63 + 21366645 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacattagggaggat---atgttctttcag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303272 63 + 13033340 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacattagggaggac---atgttctttcag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382497 63 - 11604778 ttttcctgt--------------------ccaaactgtgttttggtgtaatc-aatacacattagggaggaa---atgttcttttag i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211298 63 - 36342412 ttttctttt--------------------tcaaaccatatttttaggttacc-aacacacattttggataaa---atattattttag i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58110308 84 - 182113224 TTATCCTGTTTTATTATATTCTCACCTCATTTAACTCTATGTTGGGAAAAACTAACACACATTTGAGATAAA---ATGTTCTTCGAA i mm10.chr2 I 1 C 0 s canFam3.chr30 26801789 60 - 40214260 tttttctgt--------------------tcaagctgtattttagagtaacc-aatatatattagggagaaa------tttttttaa i canFam3.chr30 C 0 I 167 s dasNov3.JH579377 1062788 66 + 2868945 ttttcctgt--------------------tcaaactatagtttgggataacc-aataaacattggggaggaaaatacattgctttaa i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817513 262 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=1412705.000000 s hg38.chr14_KI270725v1_random 152850 114 + 172810 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtagtaccctgttataacacctag------taaaataatggt-tgaaac-aagttttctaatgaatgctaaagcta---ttagt s panTro5.chr1 126778739 114 + 228573443 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtagtaccctgttataacacctag------taaaataatggt-tgaaac-aagttttctaatgaatgctaaaacta---tcatt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391203 114 - 99763055 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtagtactctgttataacacctag------taatataatggt-tgaagc-aagatttataatgaatgctaaaacta---ttagg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15271 114 + 21985 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtagtaccctcttataacacctag------taaaataatggt-tgaaac-aagttttctaatgaatgctaaaacta---ttagt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537523 114 + 121039945 aaattatcccagctaataaattaagaaaaaaatgaaagattgtagtactctgttataacacctag------aaatataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189619 114 - 169600520 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctcttataacacctgg------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867205 114 - 171882078 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctcttataacacctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940328 114 + 40200012 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctcttataacacctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385793 114 - 7633303 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctcttataacacctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183034 113 + 58131712 aaattattccagctaataaatg-agaaaaaaatgaaagaatgtactaccctcttataacacctgg------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576663 114 - 2620224 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctcttataacacctag------taaaataatggt-tgaagc-aagttttacaatgaatgctaaaacta---ttagg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403672 114 - 10629787 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctcttataacacctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107990907 114 - 132174527 aaattattccagctaatacatgaagaaaaaaatgaaagaatgtactaccctattataatgcctag------taaaataatggt-tgaagc-aagttttttaatgaatgctaaAACTA---TTAGG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787397 113 + 21366645 aaattattccagttattaaatgaag-aaaaaatgaaagagtgtacttccctattataatgcctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303335 114 + 13033340 aaattattccagctaataaatgaagaaaaaaatgaaagagtgtacaaccctattataatgcctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaactg---ttagg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382560 114 - 11604778 aaattattccagctaataaatgaagaaaaaaatgaaagaatgtactaccctattataatgcctag------taaaataatggt-tgaagc-aagttttataatgaatgctaaaacta---ttagg i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211361 112 - 36342412 aaattatttaatttaattaatgaagaaaaagatg--agaatttactacccttttataatgactag------taaaataatgTG-TGAGTC-AAGTTTTACACTGAAAACTTAAACCT---TTAGG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58110392 116 - 182113224 AAATTTCATTAGTTAATCAAT--AAGCAAAAATGAAAGAATTT-CTATCTTTGTATGATACCTATACCTACTAAGATAGAATT-TAGAAC-AAGTTTTGCACTGAAATATAAAAATA---GT-GG i mm10.chr2 C 0 C 0 s canFam3.chr30 26802016 111 - 40214260 AAATGATACCAGCTAATAAATCAAG-GATAAGTGAAACAATTTACTACCCTTATATAATGTTTAG------TAA-ATAATTGT-TTAAGCAAAGTTTCACAATGAAAGTTAAAAC-----ATggg i canFam3.chr30 I 167 I 200 s dasNov3.JH579377 1062854 113 + 2868945 caatgatttcagataataaatgcag--aagaatgatagaatttactgccattttgtaatacctga------taaaatagtggcataaggg-atatttcaaaatgaatactaaaaccacactt--- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817513 262 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=902745.000000 s hg38.chr14_KI270725v1_random 152964 72 + 172810 tgaaaagttgatgc-aaacctttactgtggaagaatgtagctgacaTTAATTTCTTATCTGAATTACATTTTT- s panTro5.chr1 126778853 71 + 228573443 cgaaaagttgatgg-aaacctttactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTC- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391317 71 - 99763055 tgaaaaattgatgc-agacctttactgtggaggaatgtagctgacaTTAATTTCTTATCTAAATTACA-TTTT- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15385 71 + 21985 tgaaaagttgatgc-aaacctttactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTT- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537637 71 + 121039945 tgaagagttgatgc-agacctttactgtggaggaatgtagctgacaTTAATTTCTTATCTAAATTACA-TTTT- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189733 71 - 169600520 tgaaaagttgatgc-agaccttgactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTT- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867319 71 - 171882078 tgaaaagttgatgc-agaccttgactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTT- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940442 71 + 40200012 tgaaaagttgatgc-agaccttgactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTT- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385907 71 - 7633303 tgaaaagttgatgc-agaccttgactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTT- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183147 71 + 58131712 tgaaaagttgatgc-agaccttcactgtggaggaatgtagctgacaTTAATTTCTTATCCGAATTACA-TTTT- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576777 71 - 2620224 tgaaaagttgatgc-agaccttgactgtggaggaatgtagctgacaTTAATTTCTTATCTGAATTACA-TTTT- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403786 71 - 10629787 tgaaaagttggtgc-agaccttgactgtggaggaatgtaactgacaTTAATTTCTTATCTGAATTACA-TTTT- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991021 71 - 132174527 TGAAAAGTTGATGC-AGACCTTTTCTGTGGAGAAATGAGGCTGACATTAATTTCTTATCTGAATTACA-TTTT- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787510 71 + 21366645 tgaaaagttgatgc-ggaccttttctgtggaggaatgaggctgacaTTAATTTCTTATCTGAATTACA-TTTT- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303449 71 + 13033340 tgaaaagttgatgc-agaccttttctgtggaggaatgagactgacaTTAATTTCTTATCTGAATTACA-TTTT- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382674 71 - 11604778 tgaaaagttgatgc-agaccttttctgtggaggaatgaggctgacaTTAATTTCTTATCTGAATTACA-TTTT- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211473 68 - 36342412 AGAAAGGTGGATGG-AGAGCTTTATTGCAGTGGAATGTAGGTGAC---AATTTCTTATCTGAATTAGA-TTTC- i otoGar3.GL873530 C 0 I 292 s mm10.chr2 58110508 71 - 182113224 TATAAGTTTGGTGG-AGTGTTCTACTGTAGAGATTCATGAATGATACTGCTTTCTTACACAATTTGAT-TTTT- i mm10.chr2 C 0 C 0 s canFam3.chr30 26802327 71 - 40214260 TGAAAATTTCATAG-AGAACTTTATTGTGGTTGAATTTAGCTGACATTAATTTCTTATCTAACATAGA-CCTT- i canFam3.chr30 I 200 I 1 s dasNov3.JH579377 1062967 59 + 2868945 -----------tgcaagaactttattgtggaggaatgtagctgacaCTAAT---TTATTTGAATTAGA-TTTTT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817513 262 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=132637.000000 s hg38.chr14_KI270725v1_random 153036 16 + 172810 TGAAACTTTATGACTC- s panTro5.chr1 126778924 16 + 228573443 TGAAACTTTATGACTC- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391388 16 - 99763055 TGAAACTTTATGACTC- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15456 16 + 21985 TGAAACTTTATGACTC- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537708 16 + 121039945 TGAAACTTTATGACTC- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189804 16 - 169600520 TGAAACTTTTTGACTC- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867390 16 - 171882078 TGAAACTTTTTGACTC- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940513 16 + 40200012 TGAAACTTTTTGACTC- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385978 16 - 7633303 TGAAACTTTTTGACTC- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183218 16 + 58131712 TGAAACTTTTTGACTC- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576848 16 - 2620224 TGAAACTTTTTGACTC- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403857 16 - 10629787 TGAAACTTTTTGACTC- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991092 14 - 132174527 TGAAAAAGTATGA--C- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787581 14 + 21366645 TGAAAAAGTATGA--C- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303520 16 + 13033340 TGAAAAAGTATGACTC- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382745 16 - 11604778 TGAAAAAGTATGACTC- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211833 16 - 36342412 TGAAACTTTAAGACTT- i otoGar3.GL873530 I 292 C 0 s mm10.chr2 58110579 6 - 182113224 --AAACTT--------- i mm10.chr2 C 0 C 0 s canFam3.chr30 26802399 15 - 40214260 -GAAACTTTAGAACCC- i canFam3.chr30 I 1 I 1 s dasNov3.JH579377 1063026 16 + 2868945 -GAAAACTTAGAGCCCT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817513 262 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=61235.000000 s hg38.chr14_KI270725v1_random 153052 4 + 172810 TTTG s panTro5.chr1 126778940 4 + 228573443 TTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391404 2 - 99763055 --TG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15472 4 + 21985 TTTG i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5817775 4 + 72422247 TTTG i ponAbe2.chrUn I 262 I 621 s nomLeu3.chr6 53537724 4 + 121039945 TTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189820 4 - 169600520 TTTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867406 4 - 171882078 TTTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940529 4 + 40200012 TTTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385994 4 - 7633303 TTTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183234 4 + 58131712 TTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576864 4 - 2620224 TTTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403873 4 - 10629787 TTTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991106 4 - 132174527 TTTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787595 4 + 21366645 TTTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303536 4 + 13033340 TTTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382761 4 - 11604778 TTTG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211849 3 - 36342412 -TTA i otoGar3.GL873530 C 0 I 1 s canFam3.chr30 26802415 4 - 40214260 TTTG i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1063042 4 + 2868945 TTTG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110585 0 - 182113224 C e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=1161322.000000 s hg38.chr14_KI270725v1_random 153056 111 + 172810 AATTTAAAAGGGATTTTGGTGTCATTA-TT-TTTTCTTTTACAGTCTC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTTATGGTCTTTTGGAAAGAGACTATATA s panTro5.chr1 126778944 111 + 228573443 AATTTAAAAGGGATTTTGTTGTCATTA-TT-TTTTCTTTTAGAGTCTC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTTTTGGTCTTTTGGAAAGAGACTACATA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391406 112 - 99763055 AATTTAAAAGGGATTTTGGTGTCATTA-TT-TTTTCTTTTATACTCTCTTT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTTGTGGTGTTTTGGAAAGAGACTATATA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15476 110 + 21985 AATTTAAAA-GGATTTTGGTGTCATTA-TT-TTTTCTTTTACAGTCTC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTTATGGTCTTTTGGAAAGAGACTATATA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537728 103 + 121039945 AATTTAAAAGAGATTTTGGTGTC---A-TT-TTTTCTTCTATACTCTCTTT---TTT-TCACATA---------------AAAATCAAC-AATAACTGATTGGTTTTATGGTCTTTTGGAAAGAGACT----- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189824 108 - 169600520 AATTTAAAGGGGATTTTGGTGTC---A-TT-TTTTCTTTTACACTCTT-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTAATGGTCTTTTGGAAAGAGACTATGTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867410 108 - 171882078 AATTTAAAGGGGATTTTGGTGTC---A-TT-TTTTCTTTTACACTCTT-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTAATGGTCTTTTGGAAAGAGACTATGTA i macFas5.chr7 C 0 I 308 s macNem1.NW_012010577v1 26940533 108 + 40200012 AATTTAAAAGGGATTTTGGTGTC---A-TT-TTTTCTTTTACACTCTT-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTAATGGTCTTTTGGAAAGAGACTATGTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4385998 108 - 7633303 AATTTAAAGGGGATTTTGGTGTC---A-TT-TTTTCTTTTACACTCTT-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTAATGGTCTTTTGGAAAGAGACTATGTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183238 109 + 58131712 AATTTAAAGGGGATTTTGGTGTC---ATTT-TTTTCTTTTACACTCTC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGATTAATGGTCTCTTGGAAAGAGACTATGTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2576868 108 - 2620224 AATTTAAAGGGGATTTTGGTGTC---A-TT-TTTTCTTTTACACTCTT-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTAATGGTCTTTTGGAAAGAGACTATGTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8403877 108 - 10629787 AATTTAAAGGGGATTTTGGTGTC---A-TT-TTTTCTTTTACACTCTC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTTTATGGTCTTTTGGAAAGAGACTATGTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991110 110 - 132174527 AATTTAAAAGGGATTTTGGTGCCATTA-TT-TTTTCTTTTACACTTGC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTT-ATGTTTTTTTGGAAAGAGACTATAAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787599 110 + 21366645 AATTTAAAAGGAATTTTGGTGTCATTA-TT-TTTTCTTTTACACTTTC-TT---TTT-TCACATA---------------AAAATCAACCATTAACTGATTGGCTT-ATGCTCTTTTGGAAAGAGACTATAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303540 111 + 13033340 AATTTAAAAGGGATCTTGGTGTCATTA-TT-TTTTCTTTTACACTTTCTTT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTT-ATGCTTTTTTGGAAAGAGACTATAAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382765 110 - 11604778 AATTTAAAAGAGATTTTGGTGTCATTA-TT-TTTTCTTTTACACTTTC-TT---TTT-TCACATA---------------AAAATCAACTATTAACTGATTGGTTT-ATGCTTTTTTGGAAAGAGACTATAAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211853 109 - 36342412 ATTTAAAAGGGGATTTTGGTATA---A-TTATCATCTCTTATACTTCC-TT---TAT-TAACTTA---------------AAAATCAACTATTAACTGGTTGGTTTTGTGCTTTTTTGGAGAGAGGCTCTGTA i otoGar3.GL873530 I 1 C 0 s mm10.chr2 58110585 91 - 182113224 -ATGTGAGATTTATTGTAGTCCGTTTG-TC-TCTTCTTTTCCTCTCCT-TA---CATATTGTATA---------------AAAAGAGCTCATGGGC--ATCGGTGT-----------------GGACTGTAG- i mm10.chr2 C 0 C 0 s canFam3.chr30 26802419 124 - 40214260 AATTCAAAAAGGATTTTAGTCTA---A-TT-TTTTAGTCTATTTTTTC-TTTTATTT-TCATGTAAATAAAGATATATGTAAGATCAACTATTAACTAATAGATTTTATGGCCATTTGGTGAGAGACTATA-- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1063046 106 + 2868945 TATTTAAAT-GGAGTTTGGTCTAATCA-TT-TTCTCTTTTAC-----C-TT---CCT-CTATATA------------TGTAATATCAACTATTAACTGGCTCATTGTATGCCATTTTGGAGAAAGTCTACA-- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=92072.000000 s hg38.chr14_KI270725v1_random 153167 6 + 172810 AATTCT s panTro5.chr1 126779055 6 + 228573443 AATTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391518 6 - 99763055 AATTCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15586 6 + 21985 AATTCT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537831 6 + 121039945 TATTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146189932 6 - 169600520 AATTCT i rheMac8.chr7 C 0 I 323 s macFas5.chr7 147867826 6 - 171882078 AATTCT i macFas5.chr7 I 308 I 2 s macNem1.NW_012010577v1 26940641 6 + 40200012 AATTCT i macNem1.NW_012010577v1 C 0 I 2 s cerAty1.NW_012000887v1 4386106 6 - 7633303 AATTCT i cerAty1.NW_012000887v1 C 0 I 2 s chlSab2.chr26 36183347 6 + 58131712 AATTCT i chlSab2.chr26 C 0 I 2 s manLeu1.NW_012108674v1 2576976 6 - 2620224 AATTCT i manLeu1.NW_012108674v1 C 0 I 2 s colAng1.NW_012121598v1 8403985 6 - 10629787 AATTCT i colAng1.NW_012121598v1 C 0 I 2 s calJac3.chr10 107991220 6 - 132174527 AATTCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787709 6 + 21366645 AATTCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303651 6 + 13033340 AATTCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382875 6 - 11604778 AATTCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211962 6 - 36342412 AATTCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58110676 6 - 182113224 AACTCT i mm10.chr2 C 0 C 0 s canFam3.chr30 26802543 6 - 40214260 GGTTTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1063152 6 + 2868945 AATTCT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=9555.000000 s hg38.chr14_KI270725v1_random 153173 2 + 172810 GA s panTro5.chr1 126779061 2 + 228573443 GC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391524 2 - 99763055 GC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15592 2 + 21985 GC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537837 2 + 121039945 GC i nomLeu3.chr6 C 0 C 0 s calJac3.chr10 107991226 2 - 132174527 GC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787715 2 + 21366645 GC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303657 2 + 13033340 GC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382881 2 - 11604778 GC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211968 2 - 36342412 GC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58110682 2 - 182113224 GA i mm10.chr2 C 0 I 1 s canFam3.chr30 26802549 2 - 40214260 GC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1063158 2 + 2868945 GT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e colAng1.NW_012121598v1 8403991 2 - 10629787 I e manLeu1.NW_012108674v1 2576982 2 - 2620224 I e chlSab2.chr26 36183353 2 + 58131712 I e cerAty1.NW_012000887v1 4386112 2 - 7633303 I e macNem1.NW_012010577v1 26940647 2 + 40200012 I e macFas5.chr7 147867832 2 - 171882078 I e rheMac8.chr7 146189938 323 - 169600520 I a score=967479.000000 s hg38.chr14_KI270725v1_random 153175 77 + 172810 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCTGGTAAGCTCTGATTTCATCTTTCAATTTT-- s panTro5.chr1 126779063 77 + 228573443 TTTTTGTATGAAGATGTCTTTTACACTGTCAGAGGAAA-TTTTATCTCTGGTAAGTTCTGATTTCATTTTTCAATTTT-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391526 77 - 99763055 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGATAAGCTCTGATTTCATCTTTCAATTTT-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15594 77 + 21985 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCTGGTAAGCTCTGATTTCATCTTTCAATTTT-- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537839 78 + 121039945 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAATTTTTATCTCAGATAAGCTCTGATTTCATCTTTCAATTTT-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190261 77 - 169600520 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i rheMac8.chr7 I 323 C 0 s macFas5.chr7 147867834 77 - 171882078 TTTTTATATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i macFas5.chr7 I 2 C 0 s macNem1.NW_012010577v1 26940649 77 + 40200012 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i macNem1.NW_012010577v1 I 2 C 0 s cerAty1.NW_012000887v1 4386114 77 - 7633303 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i cerAty1.NW_012000887v1 I 2 C 0 s chlSab2.chr26 36183355 77 + 58131712 TTTTTGTATGATGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i chlSab2.chr26 I 2 C 0 s manLeu1.NW_012108674v1 2576984 77 - 2620224 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i manLeu1.NW_012108674v1 I 2 C 0 s colAng1.NW_012121598v1 8403993 77 - 10629787 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGACAAGCTCTGATTTCATCTTTCAATTTT-- i colAng1.NW_012121598v1 I 2 C 0 s calJac3.chr10 107991228 77 - 132174527 TTTTTGTATGAAGATCTCTTTTACACTGTCAGAGGAAA-TTTTATCTCAGATAAGCTCTGATTTCATCTTTCAATTTT-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787717 77 + 21366645 TTTTTGTATGAAGATCACTTTTACACTGTCAAAGGAAA-TTTTATCTCAGATAGGCTCTGATTTCATCTTTCAATTTT-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303659 77 + 13033340 TTTTTGTATCAAGATCTCTTTTATACTGTCAGAGGAAA-TTTTATCTCAGATAAGCTCTGATATCATCTTTCAATTTT-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382883 77 - 11604778 TTCTTGTATGAAGATCTCTTTTACGCTGTCAGAGGAAA-TTTTATCTCAGATAAGCTCTGATTTCATCTTTCAatttt-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36211970 77 - 36342412 TTTTGGTATGATGTGCGTCTCTGTGTTGTCACAGGAAA-TTCTATTGCAGATAAGCTCTGGTTCCATCTTTCAATTTG-- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58110685 67 - 182113224 CTTTTGACTGATGATCTCTAC----CCGTCAGAAGGAG-TCTTCTCTT-GGTAATCTGCAGCTC-----TCCAATTTC-- i mm10.chr2 I 1 C 0 s canFam3.chr30 26802551 77 - 40214260 CCTTTGTATGAAGATCTTCTCTATTCTGTCAGAAGAAA-TCTTATTCCAGATGACCTCTAGGTCCAACTTCAAATGTT-- i canFam3.chr30 C 0 I 21 s dasNov3.JH579377 1063160 64 + 2868945 TTTTT---TGAAAAATTTCCTTGTACTATCTGGAGAAA-T------------AAGCCCTGGGTCTGTCTTTCAAATATTT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=558482.000000 s hg38.chr14_KI270725v1_random 153252 43 + 172810 ATTTTGAATTTCTTTCTTTGTCTTTTG-TCTTATCAGCACCTTG s panTro5.chr1 126779140 43 + 228573443 ACTTTGAATTTCCTTCTTTGTCTTTTG-TTTTATCAGCACCTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391603 43 - 99763055 ATTTTGAATTTCTTTCTTTGTCTTTTG-TTTTATCAGCACCTTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15671 43 + 21985 ATTTTGAATTTCTTTCTTTGTCTTTTG-TTTTATCAGCACCTTG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537917 43 + 121039945 ATTTTGAATTTCTTTCTTTCTCTTTTG-TTTTATCAGCACCTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190338 39 - 169600520 ATTTTGAATTTC----TTTGTCTTTTG-TTTTATCAGCACCTTG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867911 43 - 171882078 ATTTTGAATTTCTTTATTTGTCTTTTG-TTTTATCAGCACCTTG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940726 43 + 40200012 ATTTTGAATTTCTTTGTTTGTCTTTTG-TTTTATCAGCACCTTG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386191 43 - 7633303 ATTTTGAATTTCTTTATTTGTCTTTTG-TTTTATCAGCACCTTG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183432 43 + 58131712 ATTTTGAATTTCTTTATTTGTCTTTTG-TTTTATCAGCACCTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577061 43 - 2620224 ATTTTGAATTTCTTTATTTGTCTTTTG-TTTTATCAGCACCTTG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404070 43 - 10629787 ATTTTGAATTTCTTTATTTGTCTTTTG-TTTTATCAGCACCTTG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991305 43 - 132174527 ATTTTGAATTTCTTTCTTTGTCTTTTG-TTTTATCAGCACTTTG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787794 43 + 21366645 ATTTTGAATTTCTTTCTTTGTCTTTTG-TTTTATCAGCACTTTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303736 43 + 13033340 ATTTTGAATTTCTTTCTTTGTCTTTTG-TTTTATCAGCACTTTG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6382960 43 - 11604778 attttgaatttctttctttgtctttta-ttttatCAGCACTTTG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212047 44 - 36342412 AATTTGAATTTCTATCTTTGCCATTTGTTTTTATAAGAAACTTG i otoGar3.GL873530 C 0 I 6 s mm10.chr2 58110752 43 - 182113224 ATTTTGAAGTTCACTCTTTACCTTTTA-TTTCACCAGAGCCGTG i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1063224 43 + 2868945 ACTTTGAACTTCTCTCTTTGCCTTTTG-TTTTATCAGGAACTTG i dasNov3.JH579377 C 0 I 582 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26802628 21 - 40214260 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=750256.000000 s hg38.chr14_KI270725v1_random 153295 60 + 172810 TTTA----ATTTAAAATAGATTCAGTGTCAA----CAAGGAGTTAAATCAGGAA-AC-TAATTTATCCAG- s panTro5.chr1 126779183 64 + 228573443 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAC- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391646 64 - 99763055 TTTA----ATTTAAAATAGATTTGATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-GAATTTATCCAG- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15714 60 + 21985 TTTA----ATTTAAAATAGATTCAATGTCAA----CAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53537960 64 + 121039945 TTTA----ATTTAAAATTGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190377 64 - 169600520 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147867954 64 - 171882078 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940769 64 + 40200012 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386234 64 - 7633303 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183475 64 + 58131712 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577104 65 - 2620224 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-ACTTAATTTATCCAG- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404113 64 - 10629787 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTAACTCAGGAA-AC-TAATTTATCCAG- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991348 64 - 132174527 TTTA----ATTTAAAATAGATTCAATGTCAACAGTCAAGGAGTTTACTCAGGAA-AC-TAATTTATCCAG- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787837 64 + 21366645 TTTA----ATTTAAAACAGATTCAATGTCAACAGTCAAGGAGTTTACTCAGGAA-AC-TAATTTATCCAG- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303779 64 + 13033340 TTTA----ATTTAAAACAGATTCAATGTCAACAGTCAAGGAGTTTACTCAGGAA-AC-TAATTTATCCAG- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383003 61 - 11604778 TTTA----ATTTAAAATAGATTCAATGTCAACAGTC---GAGTTCACTCAGGAA-AC-TAATTTATGCAG- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212097 64 - 36342412 TTTA----ATTTAAAATAGATTCAAGATCAACAGTCAACAAGTTAACTCAGGGA-CC-TGGTTTATCCAG- i otoGar3.GL873530 I 6 C 0 s mm10.chr2 58110795 51 - 182113224 TTCATATTATTTAAAAAAGACTCACGATCAATAGTC-----------------A-CT-GAGCTTATCCAG- i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1063849 66 + 2868945 TTTT----ATTTAAAACAAACTGAAAGCCAACTGTCAATGAAGTAGCCCAGGAATAT-CAAAATTTCCTGG i dasNov3.JH579377 I 582 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26802628 21 - 40214260 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=169666.000000 s hg38.chr14_KI270725v1_random 153355 15 + 172810 --AAATGCAAATATTTT s panTro5.chr1 126779247 15 + 228573443 --AAATACAAGTATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391710 15 - 99763055 --AAATACAAATATTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15774 15 + 21985 --AAATACAAATATTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538024 15 + 121039945 --AAATACAAATATTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190441 15 - 169600520 --AAATACAAATATTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868018 15 - 171882078 --AAATACAAATATTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940833 15 + 40200012 --AAATACAAATATTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386298 15 - 7633303 --AAATACAAATATTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183539 15 + 58131712 --AAATACAAATATTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577169 15 - 2620224 --AAATACAAATATTTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404177 15 - 10629787 --AAATACAAATATTTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991412 15 - 132174527 --AAATACAAATGTTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787901 15 + 21366645 --AAATACAAATGTTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303843 15 + 13033340 --AAATACAAATGTTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383064 15 - 11604778 --AAATACAAATGTTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212161 15 - 36342412 --AAATATAAAAATGTT i otoGar3.GL873530 C 0 I 1 s mm10.chr2 58110846 15 - 182113224 --CAATATAAAACCGTT i mm10.chr2 C 0 I 1 s canFam3.chr30 26802649 9 - 40214260 --AAATGTAAG------ i canFam3.chr30 I 21 C 0 s dasNov3.JH579377 1063915 12 + 2868945 ATGAATGCAAGT----- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 852101 5413 - 1089701 I e eulMac1.LGHX01000819v1 843832 5413 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=23862.000000 s hg38.chr14_KI270725v1_random 153370 2 + 172810 TG s panTro5.chr1 126779262 2 + 228573443 TG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391725 2 - 99763055 TG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15789 2 + 21985 TG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538039 2 + 121039945 TG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190456 2 - 169600520 TG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868033 2 - 171882078 TG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940848 2 + 40200012 TG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386313 2 - 7633303 TG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183554 2 + 58131712 TG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577184 2 - 2620224 TG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404192 2 - 10629787 TG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991427 2 - 132174527 TG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10787916 2 + 21366645 TG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303858 2 + 13033340 TG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383079 2 - 11604778 TG i aotNan1.NW_018501505v1 C 0 C 0 s eulMac1.LGHX01000819v1 849245 2 - 1078805 TG i eulMac1.LGHX01000819v1 I 5413 I 2046 s eulFla1.LGHW01000825v1 857514 2 - 1089701 TG i eulFla1.LGHW01000825v1 I 5413 I 2046 s otoGar3.GL873530 36212177 1 - 36342412 T- i otoGar3.GL873530 I 1 C 0 s mm10.chr2 58110862 2 - 182113224 TA i mm10.chr2 I 1 C 0 e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1063927 0 + 2868945 C e canFam3.chr30 26802658 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=58316.000000 s hg38.chr14_KI270725v1_random 153372 18 + 172810 CA-------GATATTTTATCCTTTG s panTro5.chr1 126779264 18 + 228573443 CA-------TATATTTTATCCTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391727 18 - 99763055 CA-------TATATTTTATCCTTTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15791 17 + 21985 CA--------ATATTTTATCCTTTG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538041 18 + 121039945 CA-------TATATTTTATCTTTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190458 17 - 169600520 CA-------TATATTTTATCCTTT- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868035 17 - 171882078 CA-------TATATTTTATCCTTT- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940850 17 + 40200012 CA-------TATATTTTATCCTTT- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386315 17 - 7633303 CA-------TATATTTTATCCTTT- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183556 17 + 58131712 CA-------TATATTTTATCCTTT- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577186 17 - 2620224 CA-------TATATTTTATCCTTT- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404194 17 - 10629787 CA-------TATACTTTATCCTTT- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107991429 21 - 132174527 CAT---AAATATAATTTATCCTTT- i calJac3.chr10 C 0 I 1301 s saiBol1.JH378136 10787918 18 + 21366645 CAT---AAATATAATTTACCC---- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303860 21 + 13033340 CAT---AAATATAGTTTATCTTTT- i cebCap1.NW_016107324v1 C 0 I 1 s aotNan1.NW_018501505v1 6383081 21 - 11604778 CAT---AAATATAATTTATCCTTT- i aotNan1.NW_018501505v1 C 0 I 1 s otoGar3.GL873530 36212178 22 - 36342412 --CGGTAAATATAAGTTACTTTTT- i otoGar3.GL873530 C 0 I 1 s mm10.chr2 58110864 21 - 182113224 ---GAGGGATGGGAGTTACCCTTT- i mm10.chr2 C 0 I 1 s canFam3.chr30 26802658 10 - 40214260 --------TTACACTTTG------- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1063927 8 + 2868945 ----------------TACCTTTT- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I a score=1027648.000000 s hg38.chr14_KI270725v1_random 153390 97 + 172810 TTTTAGATCCTTAATATGTA-ATTTCAAAAAATGAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACCAAAATAAGCAAA s panTro5.chr1 126779282 92 + 228573443 TT----ATCTTTAATATGTA-ATTTCTAAAAATGAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAGTAATTTTACCAAAAT-AGCAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391745 97 - 99763055 TTTTAGATCTTTAATACGTA-ATTTCTAAAAATGAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTCACCAAAATAAGCAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15808 97 + 21985 TTTTAGATCTTTAATATGTA-ATTTCTAAAAATGAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACCAAAATAAGCAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538059 97 + 121039945 TTTTAGATCTTTAATATGTA-ATTTCCAAAAATGAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACCAAAATAAGCAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190475 94 - 169600520 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATGTGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACAAAAATAAGCAAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868052 94 - 171882078 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATGTGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACAAAAATAAGCAAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940867 94 + 40200012 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATGTGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACAAAAATAAGCAAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386332 94 - 7633303 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACAAAAATAAGCAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183573 94 + 58131712 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGGATAATTTTACAAAAATAAGCAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577203 94 - 2620224 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTACAAAAATAAGCAAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404211 94 - 10629787 ---TAGATCTTTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTTGCTTGATTTCTGAGCATAGTCAATGAATAATTTTGCAAAAATAAGCAAA i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10787936 97 + 21366645 TTTTAGATCTTTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTTGCTTGATTTCTGCATATAGCTGATAAACAGTTTTGCCAAAATAAGCAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303882 96 + 13033340 TTTTAGATCCTTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTT-TTTGATTTCTGCACATGGTTGATAAACAGTTTTGCCAAAATAAGCAAA i cebCap1.NW_016107324v1 I 1 C 0 s aotNan1.NW_018501505v1 6383103 96 - 11604778 TTTTAGATCATTAATATGTA-ATTTCTAAAAATAAAATATGGACAGTTTGCTTGATTTCTGCACATAGTTGATAAATAG-TTTGCCAAAATAAGCAAA i aotNan1.NW_018501505v1 I 1 I 15 s otoGar3.GL873530 36212201 97 - 36342412 TTTTGGATTTTTAAAGCATA-ATTTTTGATAACAAAATATGGGCAATTTGGTTGATTCCTGAACACATGCAATGAGTTATTTTACCAAAATAAGCAGA i otoGar3.GL873530 I 1 C 0 s mm10.chr2 58110886 97 - 182113224 CTTCAAGCCTCCAGGATTTATGTTTTGAAAAACAAAATATGCTCAATTTATTCAATCTGTAAACATGTATCACTAATAAGTTC-CCAGAATAAGCAAT i mm10.chr2 I 1 C 0 s canFam3.chr30 26802668 82 - 40214260 TTTTAGAACTCTAATCTATA-AATTCTAAAA--TAAGTTCGGGCAATTTTCTTGACTCCTG-------------AATAATTTTACCAAAGAAAGCAAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1063935 92 + 2868945 ---TAAATTCCTAACA--TA-ACTTCTAAAAATAAAATTTCAGTACTTTGCTTGATTTTTAAATATAAATAATGAGTAACCTTAATAAAATAAGTAAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=72218.000000 s hg38.chr14_KI270725v1_random 153487 9 + 172810 CATTTTTCG s panTro5.chr1 126779374 9 + 228573443 CATTTTTCG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391842 9 - 99763055 CATTTTTCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15905 9 + 21985 CATTTTTCG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538156 9 + 121039945 CATTTTTCG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190569 9 - 169600520 CATTTTTCG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868146 9 - 171882078 CATTTTTCG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940961 9 + 40200012 CATTTTTCG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386426 9 - 7633303 CATTTTTCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183667 9 + 58131712 CATTTTTCG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577297 9 - 2620224 CATTTTTCG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404305 9 - 10629787 CATTTTTCA i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788033 9 + 21366645 GATTTTTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303978 9 + 13033340 GATTTTTGA i cebCap1.NW_016107324v1 C 0 C 0 s otoGar3.GL873530 36212298 2 - 36342412 CA------- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58110983 9 - 182113224 AATTCTTAG i mm10.chr2 C 0 C 0 s canFam3.chr30 26802750 9 - 40214260 CATTTTTGG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064027 9 + 2868945 CATTCTTGG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e aotNan1.NW_018501505v1 6383199 15 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=10920.000000 s hg38.chr14_KI270725v1_random 153496 1 + 172810 A s panTro5.chr1 126779383 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391851 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15914 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538165 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190578 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868155 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940970 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386435 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183676 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577306 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404314 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788042 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303987 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s mm10.chr2 58110992 1 - 182113224 A i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1064036 1 + 2868945 A i dasNov3.JH579377 C 0 I 8 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212300 0 - 36342412 C e aotNan1.NW_018501505v1 6383199 15 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=16170.000000 s hg38.chr14_KI270725v1_random 153497 2 + 172810 GC s panTro5.chr1 126779384 2 + 228573443 GC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391852 2 - 99763055 GC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15915 2 + 21985 GC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538166 2 + 121039945 GC i nomLeu3.chr6 C 0 I 9 s rheMac8.chr7 146190579 2 - 169600520 GC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868156 2 - 171882078 GC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940971 2 + 40200012 GC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386436 2 - 7633303 GC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183677 2 + 58131712 GC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577307 2 - 2620224 GC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404315 2 - 10629787 GC i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788043 2 + 21366645 GC i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 9303988 2 + 13033340 GA i cebCap1.NW_016107324v1 C 0 I 1 s mm10.chr2 58110993 2 - 182113224 AC i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212300 0 - 36342412 C e aotNan1.NW_018501505v1 6383199 15 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=-10979.000000 s hg38.chr14_KI270725v1_random 153499 4 + 172810 -tttt s panTro5.chr1 126779386 4 + 228573443 -tttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391854 2 - 99763055 ---tt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15917 2 + 21985 ---tt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538177 4 + 121039945 -tttt i nomLeu3.chr6 I 9 C 0 s rheMac8.chr7 146190581 4 - 169600520 -TTCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868158 4 - 171882078 -TTCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940973 4 + 40200012 -TTCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386438 4 - 7633303 -TTCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183679 4 + 58131712 -ttct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577309 4 - 2620224 -TTCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404317 4 - 10629787 -TTCA i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788046 3 + 21366645 -t-tt i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 9303991 2 + 13033340 ---tt i cebCap1.NW_016107324v1 I 1 C 0 s aotNan1.NW_018501505v1 6383214 4 - 11604778 -tttt i aotNan1.NW_018501505v1 I 15 C 0 s mm10.chr2 58110995 4 - 182113224 ATTT- i mm10.chr2 C 0 I 2593 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212300 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I a score=553492.000000 s hg38.chr14_KI270725v1_random 153503 74 + 172810 tttttttccttgagactgcgtcttgctctgtcac-----ccaagttggag-tagggtggtgtgatcttggcacactgtaa s panTro5.chr1 126779390 74 + 228573443 tttttttccttgagactgagtcttgctctatcac-----ccaggctggag-tggggtggtgtgatcttggcaaactgcaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391856 79 - 99763055 tttttttcctcgagactgagtcttgctctatcacccaggccaggccggag-tggggtggcatgatcttggcacactgcaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15919 73 + 21985 tttttttccttgagactgagtcttgctctatcac-----ccagg-tggag-tggggtggtgtgatcttggcacactgcaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538181 75 + 121039945 tttttttccttgagactgagtcttgctctatcac-----ccaggccggagatggggtggcatgatcttggcacactgcaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190585 73 - 169600520 ttttttcccttgaga-tgagtcttgctctatcac-----ccaggccagag-tggggtggcatgattttggcacactgcaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868162 73 - 171882078 ttttttcccttgaga-tgagtcttgctctatcac-----ccaggccagag-tggggtggcatgattttggcacactgcaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26940977 74 + 40200012 TTTTCTCCCttgagactgagtcttgctctatcac-----ccaggccagag-tggggtggcatgattttggcacactgcaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386442 74 - 7633303 ttttttccattgagactgagtcttgctctatcac-----ccaggccggag-tggggtggcatgattttggcacactgcaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183683 74 + 58131712 tttttttccttgagactgagtcttgctctatcac-----ccaggcccgag-tagggtggcatgattttggcacactgcaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577313 74 - 2620224 ttttttcccttgagactgagtcttgctctatcac-----ccaggccggag-tagggtggcatgattttggcacactgcaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404321 74 - 10629787 tttttttccttgagactgagtcttgctctatcac-----ccaggccggag-tggggtggcgtgattttggcacactgcaa i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788049 73 + 21366645 ttttttcccttgagactgagtcttgctctgtcac-----ccagg-tgtag-tgcagtggcgtgatctgggctcactgcaa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9303993 73 + 13033340 tttttccccttgagactgagtcttgctctattac-----ccagg-tggag-tgcggtggcgtgatctgggcccactgcaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383218 73 - 11604778 ttttttgccttgagactgagtcttgctctatcac-----ccagg-tagag-tgcagtggcatgatctgggctcactgcaa i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212300 22 - 36342412 -----TTCCTGGAGA------AATACACTATAA----------------------------------------------- i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=550247.000000 s hg38.chr14_KI270725v1_random 153577 65 + 172810 actctgccttccacgttcaagcaattcttctgcctcagcctcctgattagctgagattacagttg s panTro5.chr1 126779464 65 + 228573443 cctctgccttccaagttcaaggaattctcctgcctcagcctcctgattagctgagattatagttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55391935 65 - 99763055 cctctgccttccaagttcaagcaattctcctgcctcagcctcctgattagctgagattacagttg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 15992 65 + 21985 actctgccttccaagttcaagcaattctcctgcctcagcctcctgattagctgagattacagttg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538256 65 + 121039945 cctctgccttccaagttcaagcaattctcctgcctcagcctcctgattagctgagattacagttg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190658 65 - 169600520 catctgccttccaagttcaagaaattctcctgcctcggcctcctgattagctgagattacaggtg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868235 65 - 171882078 catctgccttccaagttcaagaaattctcctgcctcggcctcctgattagctgagattacaggtg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941051 65 + 40200012 cctctgccttccaagttcaagaaattctcctgcctcggcctcctgattagctgagattacaggtg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386516 65 - 7633303 cctctgccttccaagttcaagaaattctcctgcctcggcctcctgattagctgagattacaggtg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183757 65 + 58131712 cctctgccttccaagttcaagaaattctcctgcctcagcctcctgattagctgagattacaggtg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577387 65 - 2620224 cctctgccttccaagttcaagaaattctcctgcctcggcctcctaattagctgagattacaggtg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404395 65 - 10629787 cctctgccttccaagttcaagaaattctcctgcctcagcctcctgattagctgagattacaggtg i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788122 65 + 21366645 ctttcgcctcccagggtcaagcgattctcctaccccagcctcctgattagctgagattacagcta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304066 65 + 13033340 ctttcgcctcccagggtcaagtgattctcctacctcagcctcctgattagctgagattacagcta i cebCap1.NW_016107324v1 C 0 I 23 s aotNan1.NW_018501505v1 6383291 65 - 11604778 cttttgcctctcagggtcaagcgattctcctacctcagcctcctgattagctgacattacagcta i aotNan1.NW_018501505v1 C 0 I 29 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I a score=195831.000000 s hg38.chr14_KI270725v1_random 153642 35 + 172810 cccaccaccacacccagctaa-ttttttttttttta s panTro5.chr1 126779529 34 + 228573443 cccaccaccacatccagcaaa-ttttttgtttttt- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392000 33 - 99763055 cccaccaccacacccagctaa-ttttttgtattt-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16057 34 + 21985 cccaccaccacacccagctaa-ttttttgtttttt- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538321 34 + 121039945 cccaccatcacacccagctaa-ttttttgtatttt- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190723 34 - 169600520 cccaccaccacacccagctaa-ttttttgtatttt- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868300 34 - 171882078 cccaccaccacacccagctaa-ttttttgtatttt- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941116 34 + 40200012 cccaccaccacacccagctaa-ttttttgtatttt- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386581 34 - 7633303 cccaccaccacacccagctaa-tttttggtatttt- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183822 35 + 58131712 cccaccaccacacccagctaatttttttgtatttt- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577452 34 - 2620224 cccaccaccacacccagctaa-ttttttgtatttt- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404460 34 - 10629787 cccaccaccacacccagctaa-ttttttgtatttt- i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788187 25 + 21366645 ---------atgccctggtaa-ttttttgtatttt- i saiBol1.JH378136 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e aotNan1.NW_018501505v1 6383356 29 - 11604778 I e cebCap1.NW_016107324v1 9304131 23 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=910.000000 s hg38.chr14_KI270725v1_random 153677 1 + 172810 t s panTro5.chr1 126779563 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392033 1 - 99763055 t i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16091 1 + 21985 t i gorGor5.CYUI01005903v1 C 0 C 0 s cebCap1.NW_016107324v1 9304154 1 + 13033340 t i cebCap1.NW_016107324v1 I 23 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5817779 621 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e saiBol1.JH378136 10788212 0 + 21366645 C e otoGar3.GL873530 36212322 0 - 36342412 C e aotNan1.NW_018501505v1 6383356 29 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404494 0 - 10629787 C e manLeu1.NW_012108674v1 2577486 0 - 2620224 C e chlSab2.chr26 36183857 0 + 58131712 C e cerAty1.NW_012000887v1 4386615 0 - 7633303 C e macNem1.NW_012010577v1 26941150 0 + 40200012 C e macFas5.chr7 147868334 0 - 171882078 C e rheMac8.chr7 146190757 0 - 169600520 C e nomLeu3.chr6 53538355 0 + 121039945 C a score=9555.000000 s hg38.chr14_KI270725v1_random 153678 1 + 172810 t s panTro5.chr1 126779564 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392034 1 - 99763055 t i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16092 1 + 21985 t i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5818400 1 + 72422247 t i ponAbe2.chrUn I 621 I 96 s nomLeu3.chr6 53538355 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190757 1 - 169600520 t i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868334 1 - 171882078 t i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941150 1 + 40200012 t i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386615 1 - 7633303 t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183857 1 + 58131712 t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577486 1 - 2620224 t i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404494 1 - 10629787 t i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788212 1 + 21366645 t i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304155 1 + 13033340 t i cebCap1.NW_016107324v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e aotNan1.NW_018501505v1 6383356 29 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=28213.000000 s hg38.chr14_KI270725v1_random 153679 4 + 172810 atta s panTro5.chr1 126779565 4 + 228573443 atta i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392035 4 - 99763055 atta i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16093 4 + 21985 atta i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538356 4 + 121039945 atta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190758 4 - 169600520 atta i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868335 4 - 171882078 atta i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941151 4 + 40200012 atta i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386616 4 - 7633303 atta i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183858 4 + 58131712 atta i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577487 4 - 2620224 atta i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404495 4 - 10629787 atta i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10788213 4 + 21366645 agta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304156 4 + 13033340 agta i cebCap1.NW_016107324v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818401 96 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e aotNan1.NW_018501505v1 6383356 29 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=440733.000000 s hg38.chr14_KI270725v1_random 153683 52 + 172810 gacacggggtttcatcatgttggccaggctagtctccatctcctgacctcaa s panTro5.chr1 126779569 52 + 228573443 gagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392039 52 - 99763055 gagacggggtttcaccatgttggccaggctggtctcgaactcctgaccacaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16097 52 + 21985 gagacggggtttcaccatgttggccaggctggtctccaactcctgacctcaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538360 52 + 121039945 gagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190762 52 - 169600520 gagacgaggtttcaccatgttggccaggctggtctcaaattcccgacctcaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868339 52 - 171882078 gagacgaggtttcaccatgttggccaggctggtctcaaattcccgacctcaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941155 52 + 40200012 gagacgaggtttcaccatgttggccaggctggtctcaaattcccgacctcaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386620 52 - 7633303 gagacgaggtttcaccatgttggccaggctggtctcaaattcccgacctcaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183862 52 + 58131712 gagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577491 52 - 2620224 gagacaaggtttcaccatgttggccaggctggtctcaaattcccgacctcaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8404499 52 - 10629787 gagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaA i colAng1.NW_012121598v1 C 0 I 1720 s saiBol1.JH378136 10788217 52 + 21366645 gagatggggttttactttgttgggcaggctggtctcaaactgctgacctcaa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304160 52 + 13033340 gagatggggttttactttgttgagcaggctgctctcaaactcctgacctcaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383385 52 - 11604778 gagatggggttttactttgttgggcaggctggtctcaaactcctgacctcaa i aotNan1.NW_018501505v1 I 29 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818401 96 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I a score=281396.000000 s hg38.chr14_KI270725v1_random 153735 40 + 172810 gtgatccgcccacttcgacctcccaaagtgctgggattac s panTro5.chr1 126779621 40 + 228573443 gtgatccacccacctcgacctcccaaaatgttgagattac i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392091 40 - 99763055 gtgatccgtgcgcctcggcctcccaaagtgctggaattac i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16149 40 + 21985 gtgatccgcccacttcgacctcccaaagtgctgggattac i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538412 40 + 121039945 gtgatccgcctgccttggcctcccaaagtgttgggattac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190814 40 - 169600520 gtgatccgcctgcctcagcctcccgaagtgctgggattac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868391 40 - 171882078 gtgatccgcctgcctcagcctcccgaagtgctgggattac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941207 40 + 40200012 gtgatccgcctgcctcagcctcccgaagtgctgggattac i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386672 40 - 7633303 gtgatccgcctgcctcagcctcccgaagtgctgggattac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183914 40 + 58131712 gtgatccgcctgcctcagcctcctgaagtgctgggattac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577543 40 - 2620224 gtgatctgcctgcctcagcctcccgaagtgctgggattac i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788269 40 + 21366645 atgattcacatgcttcagcctcccaaagtgctgggattac i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304212 40 + 13033340 atgattcgcacgcttcagcctcccaaagtgctgggattac i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383437 40 - 11604778 atgattcatacgcctcagcctcccaaagtgctgggattac i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818401 96 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=9555.000000 s hg38.chr14_KI270725v1_random 153775 1 + 172810 a s panTro5.chr1 126779661 1 + 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392131 1 - 99763055 a i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16189 1 + 21985 a i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5818497 1 + 72422247 a i ponAbe2.chrUn I 96 I 576 s nomLeu3.chr6 53538452 1 + 121039945 a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190854 1 - 169600520 a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868431 1 - 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941247 1 + 40200012 a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386712 1 - 7633303 a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183954 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577583 1 - 2620224 a i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788309 1 + 21366645 a i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304252 1 + 13033340 a i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383477 1 - 11604778 a i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=196540.000000 s hg38.chr14_KI270725v1_random 153776 26 + 172810 ggcataagccaccacgcctggccTGG s panTro5.chr1 126779662 26 + 228573443 ggcataagccaccacgcccggccTGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392132 26 - 99763055 ggcataagccaccacacctggccTGG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16190 26 + 21985 ggtataagccaccacgcccggccTGG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538453 26 + 121039945 ggtataagccaccacacctggccTGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190855 26 - 169600520 ggcgtgagccaccacgcctggccTGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868432 26 - 171882078 ggcgtgagccaccacgcctggccTGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941248 26 + 40200012 ggcgtgagccaccacgcctggccTGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386713 26 - 7633303 ggcgtgagccaccacgcctggccTGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183955 26 + 58131712 ggcgtcagccaccatgcctggccTGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577584 26 - 2620224 ggcgtgagccaccacgcctggccTGG i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788310 26 + 21366645 ggtgtgagtcaccacacctggccTGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304253 26 + 13033340 ggtgtgagccaccacgcccggccTGG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383478 26 - 11604778 ggtgtgagccaccatacccggccTGG i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e canFam3.chr30 26802759 0 - 40214260 C e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=53336.000000 s hg38.chr14_KI270725v1_random 153802 9 + 172810 AGCATTTTG s panTro5.chr1 126779688 9 + 228573443 AGCTTTTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392158 9 - 99763055 ACCATTTTG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16216 9 + 21985 AGCATTTTG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538479 9 + 121039945 ACCATTTTG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190881 9 - 169600520 AGCTTTTAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868458 9 - 171882078 AGCTTTTAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941274 9 + 40200012 AGCTTTTAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386739 9 - 7633303 AGCTTTTAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183981 9 + 58131712 AGCATTTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577610 9 - 2620224 AGCTTTTAG i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788336 9 + 21366645 AGCATTTTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304279 9 + 13033340 AGCATTTTC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383504 9 - 11604778 AGCATTTTG i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26802759 9 - 40214260 AACATTTTT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064037 8 + 2868945 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=40912.000000 s hg38.chr14_KI270725v1_random 153811 6 + 172810 ATATAA s panTro5.chr1 126779697 6 + 228573443 ATATAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392167 6 - 99763055 ATATAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16225 6 + 21985 ATATAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538488 6 + 121039945 ATATGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190890 6 - 169600520 ATTTAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868467 6 - 171882078 ATTTAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941283 6 + 40200012 ATTTAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386748 6 - 7633303 ATTTAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183990 6 + 58131712 ATTTAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577619 6 - 2620224 ATTTAA i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788345 6 + 21366645 ATGTAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304288 6 + 13033340 AAGTGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383513 6 - 11604778 ATGTAA i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26802768 6 - 40214260 AGATAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064045 6 + 2868945 ATATAA i dasNov3.JH579377 I 8 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e otoGar3.GL873530 36212322 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=423657.000000 s hg38.chr14_KI270725v1_random 153817 50 + 172810 TGAATTACTGATGAAACCTTTTAATATAATGTTAGACAGCCCATTT----------AAAA- s panTro5.chr1 126779703 50 + 228573443 TGAATTACTGGGGAAACCTTTTAATATAATCTTAGACAGCCCATTT----------AAAA- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392173 50 - 99763055 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGACAGTCCATTT----------AAAA- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16231 50 + 21985 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGACAGCCCATTT----------AAAA- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538494 50 + 121039945 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGACAGTCCATTT----------AAAA- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190896 46 - 169600520 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGA----CCATTT----------AAAA- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868473 46 - 171882078 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGA----CCATTT----------AAAA- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941289 46 + 40200012 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGA----CCATTT----------AAAA- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386754 46 - 7633303 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGA----CCATTT----------AAAA- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36183996 46 + 58131712 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGA----TGATTT----------AAAA- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577625 46 - 2620224 TGAATTACTGGGGAAACCTTTTAATATAATGTTAGA----CCATTT----------AAAA- i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788351 48 + 21366645 CGAATTAATGGGGAAACCTTTTA--ATAATGTTAGAAATTCCATTT----------AAAA- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304294 50 + 13033340 CAAATTAATGGGGAAACCTTTTAATATAATGTTAGAAATTCCATTT----------AAAA- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383519 50 - 11604778 CGAATTACTGGGGAAACCTTTTAATATAATGTTAGAAATTCCATTT----------AAAA- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212322 54 - 36342412 TGAATTATTAAGGAAACCTTTTAATATAATGTTAGAAATTCTATTT----TTTA--AAAA- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26802774 48 - 40214260 TGAATAACGGAGAAAGTTTTTTA--AAAATGTTAGTGATTCTATTT----------AAAT- i canFam3.chr30 C 0 I 4 s dasNov3.JH579377 1064051 60 + 2868945 TGAATAACTGGTAAAACCTTTTAATATAATGTTACC-AATCTATTTTATTTTTACTAAAAG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 89138 1554 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=59850.000000 s hg38.chr14_KI270725v1_random 153867 7 + 172810 ATAATCC s panTro5.chr1 126779753 7 + 228573443 AGAATCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392223 7 - 99763055 AGAATCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16281 7 + 21985 ATAATCC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538544 7 + 121039945 AGAATCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190942 7 - 169600520 AGAATCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868519 7 - 171882078 AGAATCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941335 7 + 40200012 AGAATCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386800 7 - 7633303 AGAATCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184042 7 + 58131712 AGAATCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577671 7 - 2620224 AGAATCC i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788399 7 + 21366645 AGAATCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304344 7 + 13033340 AGAATAC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383569 7 - 11604778 AGAATCC i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 90692 4 + 145891 -GCAC-- i tarSyr2.KE933570v1 I 1554 I 7249 s otoGar3.GL873530 36212376 7 - 36342412 AGAATCC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26802826 7 - 40214260 AGAATCT i canFam3.chr30 I 4 C 0 s dasNov3.JH579377 1064111 7 + 2868945 GAAATGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=12367.000000 s hg38.chr14_KI270725v1_random 153874 8 + 172810 -AGTATAAT s panTro5.chr1 126779760 8 + 228573443 -AGTATAAT i panTro5.chr1 C 0 I 1122 s panPan2.chr15 55392230 8 - 99763055 -AGTAGAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16288 8 + 21985 -AGTATAAT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538551 8 + 121039945 -AGTAGAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190949 7 - 169600520 -AGTAAAT- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868526 7 - 171882078 -AGTAAAT- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941342 7 + 40200012 -AGTAAAT- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386807 7 - 7633303 -AGTAAAT- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184049 7 + 58131712 -AGTAAAT- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577678 7 - 2620224 -AGTAAAT- i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788406 8 + 21366645 -AGTACAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304351 8 + 13033340 -AGTACAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383576 8 - 11604778 -AGTACAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212383 8 - 36342412 -ACCAAATT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26802833 8 - 40214260 -GCCAAAAT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064118 8 + 2868945 AACCAAAT- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=1424122.000000 s hg38.chr14_KI270725v1_random 153882 163 + 172810 TATTATGTTCTTTATATG----ACTACATTTCACAGTGAAGTA----ACTTAGCACTCTGTATTTATAATGCTTTG-AAA-ATACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACATCT---TATTATA---TAAACAC----------AAGAATTCAATATCAATTTTCACACTT s panTro5.chr1 126780890 163 + 228573443 taTTATATTCTTTATATG----ACTACATTTCACAGTGAAGTA----ACTTAGCACTCTGTATTTATAATGCTTTG-AAA-ATACATATTGGTTGCTGATTTTGTATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAACAC----------AGGAATTCAATATTAATTTTCACACTT i panTro5.chr1 I 1122 C 0 s panPan2.chr15 55392238 168 - 99763055 TATTATACTCTTTATATG----ACTACATTTCACACTGAAGTCACTTACTTAGCACTCTTTATTTATAATGTTTTGAAAA-ATACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAAAAC----------AATAATTCAATATTAATTTTCACACTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16296 163 + 21985 TATTATATTCTTTATATG----ACTACATTTCACAGTGAAGTA----ACTTAGCACTCTGTATTTATAATGCTTTG-AAA-ATACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAACAC----------AAGAATTCAATATCAATTTTCACACTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538559 167 + 121039945 TATTATAGTCTTTATATG----ACTACATTTCACACTGAAGTCACTTACTTAGCACTCTTTATTTATAATGTTTTG-AAA-ATACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAACAC----------AATAATTCAATATTAATTTTCACACTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146190956 160 - 169600520 TAGTATATTCTTTATATG-------ATATTTCACACTGAAGTC----TCTTAGCACTCTTTATTTATAATGTTTTG-AAA-CTACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACTA---TATTATA---TAAACAC----------AAGAATTCGGTATTAATTTTCACACTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868533 160 - 171882078 TAGTATATTCTTTATATG-------ATATTTCACACTGAAGTC----TCTTAGCACTCTTTATTTATAATGTTTTG-AAA-CTACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACTA---TATTATA---TAAACAC----------AAGAATTCGGTATTAATTTTCACACTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941349 160 + 40200012 TAGTATATTCTTTATATG-------ATATTTCACACTGAAGTC----TCTTAGCACTCTTTATTTATAATGTTTTG-AAA-CTACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACTA---TATTATA---TAAACAC----------AATAATTCGGTATTAATTTTCACACTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386814 160 - 7633303 TAGTATATTCTTTATATG-------ATATTTCACACTGAAGTC----ACTTAGCACTCTTTATTTATAATGTTTTG-AAA-CTACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAACAC----------AAGAATTCAGTATTAATTTTCACCCTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184056 160 + 58131712 TAGTATATTCTTTATATG-------ACATTTCACACTGAAGTC----ACTTAGCACTCTTTATTTATAATGTTTTG-AAA-CTACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAAGAA----------AAGAATTCAGTATTAATTTTCACACTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577685 160 - 2620224 TAGTATATTCTTTATATG-------ATATTTCACACTGAAGTC----ACTTAGCACTCTTTATTTATAATGTTTTG-AAA-CTACATATTAGTTGCTGATTTTATATTCCAAACAGAAATTATAGGACACCA---TATTATA---TAAACAC----------AAGAATTCAGTATTAATTTTCACACTT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788414 163 + 21366645 GATTATATTTTTTATATG----ACTACATTTCACACTAAAGTC----ACTTAGCACTCTTTATTTATAATGTTTTG-AAA-ATATATATTAGTTGCTGGTTTTGTATTCCAAACAGAAATTCTAGGATACTA---TATTATA---TAAAGAT----------AAGAATTCGATATTAATTTTCACATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304359 163 + 13033340 TATTATATTTTTTATATG----ACTACATTTCACACTAAAGTC----ACTTAGCACTCTTTATTTATAATGTTTTG-AAA-ATATGTATTAGTTGCTGATTTTGTATTCCAAACAGAAATTCTAGGATACTA---TATTATA---TAAAGAT----------AAGAATTCAATATTAATTTTCATACTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383584 163 - 11604778 TATTATATTTTTTATATG----ACTACATTTCACACTAAAGTC----ACTTAGCACTCTTTATTTATAATGTTTCA-AAA-ATATATATTAGTTGCAGATTTTGTATTCCAAACAGAAATTCTAGGATACTA---TATTATA---TAAAGAT----------AAGAATTCAATACTAATTTTCACACTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212391 162 - 36342412 TATTATATTCTTTCTATGTAGTACTATAGTTCATACTGAAGTC----AGTTAACACTATTCATTT-TAATACTTTA-AAA-ATCCATATTTTTTGCTGAT--------------AGAAATTATAGGACACTATGGtattata---taaaaatattcaattcaaagaattcaatat---tttttatattt i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26802841 166 - 40214260 TATTGCATTCTTTATATG----ACAGCATTTTACATTAAATTT----ACTTAGTACCACTCATTTGCAGTATTTTA-AAATATCTATATTGGTTAATGATTTTATATGCT-AACAGAATAGATAAGGCACTG---TAGTATCAATTAAACAT----------GATAATTCAATATTTATTTTCATATTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064126 157 + 2868945 TTTTATACTC------TG----ACTACATTTTACATTTA--TT----ACCTAGCACTGTTCATCTACAGTG-TTTA-AAA-ATCTATATGAGTTGCTGATTTTACATTTCAAACTGAAGGTGTAGGACACTACAGTATCAAG---TAAACAC----------AAGACTTCAATGTTTACTTTCATTTAT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=81147.000000 s hg38.chr14_KI270725v1_random 154045 9 + 172810 TAAAACAAT s panTro5.chr1 126781053 9 + 228573443 TAAAACAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392406 9 - 99763055 TAAAACAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16459 9 + 21985 TAAAACAAT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538726 9 + 121039945 TAAAACAAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191116 9 - 169600520 TAAAACAAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868693 9 - 171882078 TAAAACAAC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941509 9 + 40200012 TAAAACAAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386974 9 - 7633303 TAAAACAAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184216 9 + 58131712 TAAAACAAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577845 9 - 2620224 TAAAACAAC i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788577 9 + 21366645 TAAAACAAT i saiBol1.JH378136 C 0 I 3 s cebCap1.NW_016107324v1 9304522 9 + 13033340 TAAAACAAT i cebCap1.NW_016107324v1 C 0 I 3 s aotNan1.NW_018501505v1 6383747 9 - 11604778 TAAAACAAT i aotNan1.NW_018501505v1 C 0 I 3 s canFam3.chr30 26803007 9 - 40214260 TACAGCAAT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064283 9 + 2868945 TATAACTAT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e otoGar3.GL873530 36212553 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=24933.000000 s hg38.chr14_KI270725v1_random 154054 6 + 172810 AGTCTT s panTro5.chr1 126781062 6 + 228573443 AATCTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392415 6 - 99763055 AATCTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16468 6 + 21985 AATCTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538735 6 + 121039945 AATCTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191125 6 - 169600520 AATGTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868702 6 - 171882078 AATGTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941518 6 + 40200012 AATGTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386983 6 - 7633303 AATGTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184225 6 + 58131712 AATGTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577854 6 - 2620224 AATGTT i manLeu1.NW_012108674v1 C 0 C 0 s canFam3.chr30 26803016 6 - 40214260 AAGCTT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e otoGar3.GL873530 36212553 0 - 36342412 C e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=530028.000000 s hg38.chr14_KI270725v1_random 154060 122 + 172810 ggccctgcgcggtggcttgcgcctgtattcccagcactttggaaggtggaggcaggcggatcacgaggtcagaagattgagaccatcctgactaacaaggtgaaaccccgtctctaataaaa s panTro5.chr1 126781068 122 + 228573443 ggccttgagcattggcttgtgcctgtattcccagcactttgggaggtcgaggcaggcggatcacaaggtcagaagattgagaccatcctggctaacacggtgaaaccccgtctctaataaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392421 122 - 99763055 ggccgggcacggtggctcgcgcctgtaatcccagcactttgggaggccgaggcaggcggatcatgaggtcagaagattgagaccatcctggctagcacagtgaaaccccgtctctaataaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16474 121 + 21985 ggccctgc-cggtggcttgcgcctgtattcccagcactttgggaggtcgaggcaggcggatcacgaggtcagaagattgagaccatcctggctaacaaggtgaaaccccgtctctaataaaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538741 122 + 121039945 ggccgggcgtggtggctcgcgcctgtaatcccagcactttgggaggccgaggcaggtggatcaccaggtcagaagattgagaccatcctggctaacacagtgaaaccacgtctctaataaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191131 122 - 169600520 Agccaggcacggtggctggcgcctgtaatcccagcactttgggaggccggggcgggtggatcacgaggtcagaagattgagaccatcctggttaacacggtgaaagcctgtctctactaaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868708 122 - 171882078 Agccaggcacggtggctggcgcctgtaatcccagcactttgggaggccggggcgggtggatcacgaggtcagaagattgagaccatcctggttaacacggtgaaagcatgtctctactaaaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941524 122 + 40200012 Agccaggcatggtggctggcgcctgtaatcccagcactttgggaggccggggcgggtggatcacgaggtcagaagattgagaccatcctggttaacacggtgaaagcctgtctctactaaaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4386989 122 - 7633303 Agccaggcacggtggctggcgcctgtaatcccagcactttgagaggccgggacgggtggatcacgaggtcagaagattgagaccatcctggttaacacggtgaaagcctgtctctactaaaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184231 122 + 58131712 ggccaggtacggtggctggccgctgtaatcccaccactttgggaggccggggtgggcggatcacgaggtcagaagattgagaccatcctggttaacacggtgaaagcctgtctctactaaaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577860 122 - 2620224 Agccaggcacggtggttggcgcctgtaatcccagcactttgggaggccgggacgggtggatcacgaggtcagaagattgagaccatcctggttaacacggtgaaagcctgtctctactaaaa i manLeu1.NW_012108674v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803022 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e otoGar3.GL873530 36212553 0 - 36342412 C e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=6006.000000 s hg38.chr14_KI270725v1_random 154182 1 + 172810 a s panTro5.chr1 126781190 1 + 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392543 1 - 99763055 a i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16595 1 + 21985 a i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538863 1 + 121039945 a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191253 1 - 169600520 a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868830 1 - 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941646 1 + 40200012 a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387111 1 - 7633303 a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184353 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577982 1 - 2620224 a i manLeu1.NW_012108674v1 C 0 C 0 s otoGar3.GL873530 36212553 1 - 36342412 a i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803022 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=20514.000000 s hg38.chr14_KI270725v1_random 154183 7 + 172810 taaaaaa s panTro5.chr1 126781191 7 + 228573443 tacaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392544 7 - 99763055 tacaaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16596 7 + 21985 tacaaaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538864 7 + 121039945 caaaaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191254 7 - 169600520 tacaaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868831 7 - 171882078 tacaaaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941647 3 + 40200012 tac---- i macNem1.NW_012010577v1 C 0 I 6 s cerAty1.NW_012000887v1 4387112 7 - 7633303 tacaaaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184354 6 + 58131712 tac-aaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2577983 7 - 2620224 tacaaaa i manLeu1.NW_012108674v1 C 0 C 0 s otoGar3.GL873530 36212554 7 - 36342412 taCAGTA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803022 7 - 40214260 TAAAAAA i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=12875.000000 s hg38.chr14_KI270725v1_random 154190 3 + 172810 aaa s panTro5.chr1 126781198 3 + 228573443 aaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392551 3 - 99763055 aaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16603 3 + 21985 aaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538871 3 + 121039945 aaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191261 3 - 169600520 aaa i rheMac8.chr7 C 0 I 19 s macFas5.chr7 147868838 3 - 171882078 aaa i macFas5.chr7 C 0 I 19 s cerAty1.NW_012000887v1 4387119 3 - 7633303 aaa i cerAty1.NW_012000887v1 C 0 I 8 s chlSab2.chr26 36184360 3 + 58131712 aaa i chlSab2.chr26 C 0 I 7 s manLeu1.NW_012108674v1 2577990 3 - 2620224 aaa i manLeu1.NW_012108674v1 C 0 I 7 s otoGar3.GL873530 36212561 3 - 36342412 ATA i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2049629 13975 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I e macNem1.NW_012010577v1 26941650 6 + 40200012 I a score=-28307.000000 s hg38.chr14_KI270725v1_random 154193 2 + 172810 a---------t s panTro5.chr1 126781201 9 + 228573443 a--aaaaaatt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392554 7 - 99763055 a----aaatta i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16606 8 + 21985 a---aaaaatt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538874 11 + 121039945 caaaaaaaatt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191283 1 - 169600520 ----------t i rheMac8.chr7 I 19 I 1 s macFas5.chr7 147868860 1 - 171882078 ----------t i macFas5.chr7 I 19 I 1 s macNem1.NW_012010577v1 26941656 1 + 40200012 ----------t i macNem1.NW_012010577v1 I 6 I 1 s cerAty1.NW_012000887v1 4387130 1 - 7633303 ----------t i cerAty1.NW_012000887v1 I 8 I 1 s chlSab2.chr26 36184370 1 + 58131712 ----------t i chlSab2.chr26 I 7 I 1 s manLeu1.NW_012108674v1 2578000 1 - 2620224 ----------t i manLeu1.NW_012108674v1 I 7 I 1 s rhiRox1.KN300076v1 2063604 2 + 2481265 ---------at i rhiRox1.KN300076v1 I 13975 I 9481 s otoGar3.GL873530 36212564 2 - 36342412 -------AC-- i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=25806.000000 s hg38.chr14_KI270725v1_random 154195 4 + 172810 agcc s panTro5.chr1 126781210 4 + 228573443 agcc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392561 4 - 99763055 agcc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16614 4 + 21985 agcc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538885 4 + 121039945 agcc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191285 4 - 169600520 agcc i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147868862 4 - 171882078 agcc i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 26941658 4 + 40200012 agcc i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 4387132 4 - 7633303 agcc i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 36184372 4 + 58131712 agcc i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 2578002 4 - 2620224 agcc i manLeu1.NW_012108674v1 I 1 C 0 s otoGar3.GL873530 36212566 4 - 36342412 AGCC i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=640909.000000 s hg38.chr14_KI270725v1_random 154199 154 + 172810 tggcgtggtggcgggtgcctgtagtccc-gctactagagaggctgaggcaggagaatggcacgaagccaggaggctgagctcgcagtgagccgagatggcgccactgcactccagcctggatgacacagcgagactccgtct--caaaaaaaaaaaa s panTro5.chr1 126781214 154 + 228573443 gggcatgttggcaggtgcctgtagtccc-gctactcgagaggctgaggctggagaatggcatgaacccaggaggctgagctcacagtaagctgagatggcgccactgcactccagcctggatgacacagcaagactccatct--caaaaaaaaaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392565 152 - 99763055 gggcgtggtggcgggcacctgtagtccc-gctactcgggaggctgaggcaggagaatggcatgaacctgggaggt--ggcttgcagtgagccgagatggtgccactgcactctagcctgggcaacagagcaagactccatct--ccaaaaaaaaaaa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16618 154 + 21985 gggcgtggtggcgggcgcctgtagtccc-gctactcgagaggctgaggcaggagaatggcatgaagccaggaggctgagctcgcagtgagccgagatggcgccactgcactccagcctggatgacacagcgagactccatct--caaaaaaaaaaaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53538889 154 + 121039945 aggcgtggtggcgggcacctgtagtccc-actagtcgggaggctgaggcaggagaatggcatgaacccgggaggcggagctcgcagtgagccgagatggcgccactgcactccagcctgggcgacagaacaagactccgtct--caaaaaaaaaaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191289 153 - 169600520 gggcatggtggtgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggcatgaacccgggaggcagagcttgcagtgagtcgagatggcaccactgcactccagcctgggcgacagagtaagactctgtct--caaaaaaaaaa-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147868866 152 - 171882078 gggcatggtggtgggcgcctgtagtcccagctactcgggagactaaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagtcgagatggcaccactgcactccagcctgggcgacagagtaagactctgtct--c-aaaaaaaaa-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941662 153 + 40200012 gggcgtggtggcgggcgcctgtagtcccagctactcaggagactaaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagtcgagatggcaccactgcactccagcctgggcgacagagtgagactctgtct--caaaaaaaaaa-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387136 150 - 7633303 gggcatggtggtgggcacctgtagtcccagctactcgggagactgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagtcgagatggcaccactgcactccagcctgggcgacagagcgagactctatct--c---aaaaaaa-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184376 155 + 58131712 gggcatggtggcgggcgcctgtagtcccagctactcgggagactgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagtcgagatggcaccactgcactccagcctgggcgacagagcgagactccgtctactaaaaaaaaaa-- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578006 148 - 2620224 gggcgtggtggtgggcgcctgtagtcccagctactcaggagactgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagtcgagatggcaccactgcactccagcctgggcgacagagcgagactctgtct-------aaaaaa-- i manLeu1.NW_012108674v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5818498 576 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e otoGar3.GL873530 36212570 0 - 36342412 C e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=12746.000000 s hg38.chr14_KI270725v1_random 154353 3 + 172810 aaa s panTro5.chr1 126781368 3 + 228573443 aaa i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 16772 3 + 21985 aaa i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5819074 2 + 72422247 -aa i ponAbe2.chrUn I 576 I 96 s nomLeu3.chr6 53539043 2 + 121039945 -aa i nomLeu3.chr6 C 0 I 1 s rheMac8.chr7 146191442 3 - 169600520 aaa i rheMac8.chr7 C 0 I 3 s macFas5.chr7 147869018 3 - 171882078 aaa i macFas5.chr7 C 0 I 3 s macNem1.NW_012010577v1 26941815 3 + 40200012 aaa i macNem1.NW_012010577v1 C 0 I 3 s cerAty1.NW_012000887v1 4387286 3 - 7633303 aaa i cerAty1.NW_012000887v1 C 0 I 3 s chlSab2.chr26 36184531 3 + 58131712 aaa i chlSab2.chr26 C 0 I 4 s manLeu1.NW_012108674v1 2578154 3 - 2620224 aaa i manLeu1.NW_012108674v1 C 0 I 3 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064292 0 + 2868945 C e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e otoGar3.GL873530 36212570 0 - 36342412 C e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I e panPan2.chr15 55392717 0 - 99763055 C a score=819.000000 s hg38.chr14_KI270725v1_random 154356 3 + 172810 aaa s panTro5.chr1 126781371 3 + 228573443 aaa i panTro5.chr1 C 0 I 8 s dasNov3.JH579377 1064292 3 + 2868945 AAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819076 96 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e gorGor5.CYUI01005903v1 16775 0 + 21985 C e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10788586 3 + 21366645 I e otoGar3.GL873530 36212570 0 - 36342412 C e aotNan1.NW_018501505v1 6383756 3 - 11604778 I e cebCap1.NW_016107324v1 9304531 3 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I e manLeu1.NW_012108674v1 2578157 3 - 2620224 I e chlSab2.chr26 36184534 4 + 58131712 I e cerAty1.NW_012000887v1 4387289 3 - 7633303 I e macNem1.NW_012010577v1 26941818 3 + 40200012 I e macFas5.chr7 147869021 3 - 171882078 I e rheMac8.chr7 146191445 3 - 169600520 I e nomLeu3.chr6 53539045 1 + 121039945 I e panPan2.chr15 55392717 0 - 99763055 C a score=61926.000000 s hg38.chr14_KI270725v1_random 154359 8 + 172810 CTTTTCAA s panTro5.chr1 126781382 8 + 228573443 CTGTTCAA i panTro5.chr1 I 8 C 0 s panPan2.chr15 55392717 8 - 99763055 CTTTTCAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16775 8 + 21985 CTTTTCAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539046 7 + 121039945 -TTTTCAA i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 146191448 8 - 169600520 CTTTTCAA i rheMac8.chr7 I 3 C 0 s macFas5.chr7 147869024 8 - 171882078 CTTTTCAA i macFas5.chr7 I 3 C 0 s macNem1.NW_012010577v1 26941821 8 + 40200012 CTTTTCAA i macNem1.NW_012010577v1 I 3 C 0 s cerAty1.NW_012000887v1 4387292 8 - 7633303 CTTTTCAA i cerAty1.NW_012000887v1 I 3 C 0 s chlSab2.chr26 36184538 8 + 58131712 CTTTTCAG i chlSab2.chr26 I 4 C 0 s manLeu1.NW_012108674v1 2578160 8 - 2620224 CTTTTCAA i manLeu1.NW_012108674v1 I 3 C 0 s saiBol1.JH378136 10788589 8 + 21366645 CTTTTCAG i saiBol1.JH378136 I 3 C 0 s cebCap1.NW_016107324v1 9304534 8 + 13033340 CTTTTCAA i cebCap1.NW_016107324v1 I 3 C 0 s aotNan1.NW_018501505v1 6383759 8 - 11604778 CTTTTCAA i aotNan1.NW_018501505v1 I 3 C 0 s otoGar3.GL873530 36212570 8 - 36342412 ATTTTTTA i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1064295 5 + 2868945 CTTTT--- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819076 96 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26803029 0 - 40214260 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=782446.000000 s hg38.chr14_KI270725v1_random 154367 87 + 172810 TTTTTAAAATTTTTCTCAAACTACCCATCAGAGAAGTT-TAACATCTCCATTTACATTTCTATGATGTTATACAGAAATATTTTATTT s panTro5.chr1 126781390 87 + 228573443 TTTTTAAAATTTTTCTCAAACTACTCATCAGAGAAGTT-TAACATCTCCATTTACATTTCTATGATGTTATATGGAAATATTTTATTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392725 88 - 99763055 TTTTTAAAATTTTTCTCAAATTACCCATCGGAGAAGTTAAAACATCTCCATTTACATTTCTATGATGTTATACAAAAATATTTTCTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16783 87 + 21985 TTTTTAAAATTTTTCTCAAACTACCCATCAGAGAAGTT-TAACATCTCCATTTACATTTCTATGATGTTATACAGAAATATTTTATTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539053 88 + 121039945 TTTTTAAAATTTTTCTCAAACTACCCATTGGAGAAGTTAAAACATCTCCATTTACATTTCTACAATGTTATACAAAAATATTTTCTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191456 88 - 169600520 TTTTAAACATTTTTCTCAAACTACCCATTGGAGAAGTTAAAATATCGCCATTTACATTTCTATGATGTTATACAAAAATATTTTATTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869032 88 - 171882078 TTTTAAACATTTTTCTCAAACTACCCATTGGAGAAGTTAAAATATCGCCATTTACATTTCTATGATGTTATACAAAAATATTTTATTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941829 88 + 40200012 TTTTAAACATTTTTCTCAAACTACCCATTGGAGAAGTTAAAATATCGCCATTTACATTTCTATGATGTTATACAAAAATATTTTATTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387300 88 - 7633303 TTTTAAACATTTTTCTCAAACTACCCATTGGAGAAGTTAAAATATTGCCATTTACATTTCTATGATGTTATACAAAAATATTTTATTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184546 88 + 58131712 TTTTAAACATTTTTCTCAAACTACCCACTGGAGAAGTTAAAATATCGCCATTTACATTTCTATGATGTTATACAAAAATATTTTATTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578168 88 - 2620224 TTTTAAACATTTTTCTCAAACTACCCATTGGAGAAGTTAAAATATTGCCATTTACATTTCTATGATGTTATACAAAAATATTTTATTT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788597 88 + 21366645 TTTTTAAAATTTTTCTCAAACTACCCATCAGAGAAATGAAAACATCTCCATTTACATTTCTATGATGTTATACAAAAATATTTTCTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304542 88 + 13033340 TTTTTAAAGTTTTTCTCAAACTACCCATCAGAGAAGTTAAAACATCTCCATTTACATTTCTATGATGTTATACAAAAATATTTTCTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383767 88 - 11604778 TTTTTAAAATTTTTCTCAAACTACCCATCAGGGAAGTTAAAACATCTCCATTGACATTTCTATGATGTTATACAAAAATATTTTCTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212578 86 - 36342412 TTCTTTTAATTTTTATCTAACTACCCATTGGAGAAATTAAAACATCTCTATTTACATTTCTATTAT-TTATAAAACAA-ATTTTGTTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803029 82 - 40214260 TTCTTCTAAGCTTTATCTTGCTGCTCATTAGAACAGTTAAAATATCTCTATTTACATTTCCAAGATG--ATAAACAAATCTTTT---- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064300 86 + 2868945 -TTTCTAACTTTTATTCAAGCTACCTTTTGGAACAGTTAAAACTTCCCTGTTTACATATCCATGATGATGTAC-GCAATATTTTTTCT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819076 96 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=5780.000000 s hg38.chr14_KI270725v1_random 154454 1 + 172810 -C s panTro5.chr1 126781477 1 + 228573443 -C i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392813 1 - 99763055 -C i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16870 1 + 21985 -C i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5819172 1 + 72422247 -C i ponAbe2.chrUn I 96 I 618 s nomLeu3.chr6 53539141 1 + 121039945 -C i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191544 1 - 169600520 -C i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869120 1 - 171882078 -C i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941917 1 + 40200012 -C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387388 1 - 7633303 -C i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184634 1 + 58131712 -C i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578256 1 - 2620224 -C i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788685 1 + 21366645 -C i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304630 1 + 13033340 -C i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383855 1 - 11604778 -C i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212664 1 - 36342412 -C i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803111 1 - 40214260 -C i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064386 1 + 2868945 G- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=982292.000000 s hg38.chr14_KI270725v1_random 154455 116 + 172810 TCTCCCCAGAATAATATAGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTTACTTTAATTGTTTAAGGATTTCTATCTCTT------------CCTATTCTG-AATGATTACTCTC--TTTTT s panTro5.chr1 126781478 116 + 228573443 TTTCCCCAGAATAACAGAGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTTATTTTAATTGTTTAAGGGTTTCTATCTCTT------------CCTATTCTG-AATGATTAGTCTC--TTTTG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392814 112 - 99763055 TTTCCCCAGAATAATACGGGC---AAAATCTCTTCCTCTGACTATACACACCTGGTATTGTTATT----TTGTTTAAGAGTTTCTATCTCTT------------CCTACTCTG-AATGATTATTCTC--TTTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16871 115 + 21985 TTTCCCCAGAATAATATAGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTTATTTTAATTGTTTAAG-GTTTCTATCTCTT------------CCTATTCTG-AATGATTACTCTC--TTTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539142 116 + 121039945 TTTCCCCAGAATAATATGGGC---AAAATCTCTTCCTCTGACTATACACACCTGGTATTGTTATTTTAATTGTTTAAGGGTTTCTATCTCTT------------CCTATTCTG-AATGATTATCCTC--TTTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191545 116 - 169600520 TTTCCCCAGAATAACATGGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTGACTTTAATTGTTTACGGGTTTCTATCTCTT------------CCTGTTCTG-AATGATTATTCTC--TTTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869121 116 - 171882078 TTTCCCCAGAATAACATGGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTGACTTTAATTGTTTACGGGTTTCTATCTCTT------------CCTGTTCTG-AATGATTATTCTC--TTTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26941918 116 + 40200012 TTTCCCCAGAATAACATGGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTGACTTTAATTGTTTAAGGGTTTCTATCTCTT------------CCTGTTCTG-AATGATTATTCTC--TTTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387389 116 - 7633303 TTTCCCCAGAATAACATGAGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTGTGACTTTAATTGTTTAAGGGTTTCTATCTCTT------------CCTATTCTG-AATGATTATTCTC--TTTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184635 116 + 58131712 TTTCCCCAGAATAACACGGGC---AAAATCTCTCCCTCTGACTATACACACCTGGTATTATGACTTTAGTTGTTTAAGGGTTTCTATCTCTT------------CCTATTCTG-AATGATTATTCTC--TTTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578257 116 - 2620224 TTTCCCCAGAATAACATGGGC---AAAATCTCTCTCTCTGACTATACACACCTGGTATTGTGACTTTAATTGTTTAAGGGTTTCTATCTCTT------------CCTATTCTG-AATGATTATTCTC--TTTTT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788686 110 + 21366645 TTTCCCCAGAATAACAT-GGC---AAAATCTCTCCCTCTGACTACACACACCTGGTACTGTGATTTTAATTG-----GGATTTCTATCTTTT------------CCTATTCTG-AATAATAATTCTC--TTTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304631 115 + 13033340 TTTCCCCAGAATAACAT-GGC---AAAATCTCTCCCTCTGACTACACACACCTGGTATTGTGATTTTAATTGCTTAAGGATTTCTATCTCCT------------CCTATTCTG-AATGATAACTCTT--TTTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383856 115 - 11604778 TTTCCCCAGAATAACAT-GGC---AAAATCTCTCCCTCTGACTACACACACCTGGTATTGTGATTTTAATTGTTTAAGGATTTCTATCTCTT------------CCTATACTG-AATGATAATTCTC--TTTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212665 128 - 36342412 TTTGTCCAGAAAAGAATGGAT--AAAAATCTCTTTCTCTCACTATTAATGCCTGGCACTGTGGAT-TAATTCCTTAAAGGTCTTACTCTCTCTCTCACTTCCTACCTATTCTG---TGAGGAGTGTTAATTTTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803112 101 - 40214260 TTTCACTAGAATAAAATGGGC---AAAATCTTTCTC-------ATA---------TGTTGTGATTTTAATAGCTTAAGTTTCTCTCCCTCTA-----------GCCTGTGGTG-AATTTTAATTCTT--TTTTT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064387 119 + 2868945 TTTCTCCGGAATAACATGGGCAAAAAAATTTCTCCATCATGCTATGTAGGACTAGCATTGCCATTTTAATAGCTCATGCCCCTCC-TCTCTC------------CTCATTCTGTTATGATTTTTATT--TCTCT i dasNov3.JH579377 C 0 I 442 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819173 618 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=22470.000000 s hg38.chr14_KI270725v1_random 154571 2 + 172810 -GA s panTro5.chr1 126781594 2 + 228573443 -GA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392926 2 - 99763055 -GA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16986 2 + 21985 -GA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539258 2 + 121039945 -GA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191661 2 - 169600520 -GA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869237 2 - 171882078 -GA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942034 2 + 40200012 -GA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387505 2 - 7633303 -GA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184751 2 + 58131712 -GA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578373 2 - 2620224 -GA i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788796 2 + 21366645 -GA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304746 2 + 13033340 -GA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383971 2 - 11604778 -GA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212793 2 - 36342412 -GA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803213 3 - 40214260 CGA i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819173 618 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1064506 442 + 2868945 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=1515798.000000 s hg38.chr14_KI270725v1_random 154573 186 + 172810 GCTTTCTTGCAGTAACCGTTTTAAA-----TAGTCTCTAGACAACTTTCTGGATTCTAGGATCCACATTAATCTTCCTGCCATTGCACTTTCTGTCTTCTCCAAGAGTCTA-GCTTTTATGAGAACAAAATAGTCATATCTT-CTT-----TAGAGAAGAG-----------TTTCCAGTGTAAAGAC-TAAAAGTTTAAGTTAATTGTA-- s panTro5.chr1 126781596 185 + 228573443 GCTTTCTTGCAGTAACCACTTTAAA-----TAGTCTCTAGACAAATTTCTAGATTGTAGGATCCACATTAATCTTCCTGCCGTTGCAGTTTCTGTCTTCTCCAAGACTCTA-GCTTTTATGAGAACAAAATAGTCATATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGAC-TAAAA-TTTAAGTTAATTGTA-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55392928 186 - 99763055 GCTTTCTTGCAGTAACCATTTTAAA-----TAGTCTCTAGACAACTTTCTAGACTCTAGGACCCACATTAATCTTCTTGCCATTGCAGTTTCTGTCTTCTCCAAGAGTCTA-GCTTCTATGAGAACATAATAGTCACATCTC-CTT-----TAAAGAAGAG-----------TCTCCAGTGTAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 16988 186 + 21985 GCTTTCTTGCAGTAACCATTTTAAA-----TAGTCTCTAGACAACTTTCTAGATTCTAGGATCCACATTAATCTTCCTGCCGTTGCAGTTTCTGTCTTCTCCAAGAGTCTA-GCTTTTATGAGAACAAAATAGTCATATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539260 185 + 121039945 GCTTTCTTGCAGTAACCGTTTTAAA-----TAGTCTCTAGACAACTTTCTAGACTCTAGGACCCACACTAATCTTCCTGCCATTGCAGTTTCTGTCTT-TCCAAGAGTCTA-GCTTCTATGAGAACATAATAGTCACATCTT-CTT-----TAAAGAAGAG-----------TCTCCAGTGTAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191663 183 - 169600520 GCTTTCTTGCCATAACTGTTT---------TGGTCTCTAGACAACTTTCTAGACTCCAGGACCCACATTAATCTTCCTGCCACTGCAGTTTCTGTCTTCTCCAAGAATCTA-GCTTCTACGAGAACAGAATACTCACATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGACTTAAAAGTTTAAGTTAATTGTA-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869239 183 - 171882078 GCTTTCTTGCCATAACTGTTT---------TGGTCTCTAGACAACTTTCTAGACTCCAGGACCCACATTAATCTTCCTGCCACTGCAGTTTCTGTCTTCTCCAAGAATCTA-GCTTCTACGAGAACAGAATACTCACATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGACTTAAAAGTTTAAGTTAATTGTA-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942036 183 + 40200012 GTTTTCTTGCCATAACTGTTT---------TGGTCTCTAGACAACTTTCTAGACTCCAGGACCCACATTAATCTTCCTGCCACTGCAGTTTCTGTCTTCTCCAAGAATCTA-GCTTCTACGAGAACAGAATACTCACATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGACTTAAAAGTTTAAGTTAATTGTA-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387507 183 - 7633303 GCTTTCTTGCCATAACTGTTT---------TGGTCTCTAGACAACTTTCTAGACTCTAGGACCCACATTAATCTTCCTGCCACTGCAGTTTCTGTCTTCTCCAAGAGTCTA-GCTTCTACGAGAACAGAATACTCACATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGGCTTAAAAGTTTAAGTTAATTGTA-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184753 182 + 58131712 GCTTTCTTGCCATAACTGTTT---------TTGTCTCTAGACAACTTTCTAGACTCTAGGACTCACATTAATCTTCCTGCCACTGCAGTTTCTGTCCTTTCTAAGAGTCTA-GCTTCTACGAGAACAGAATAGTCACATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578375 183 - 2620224 GCTTTCTTGCCATAACTGTTT---------TGGTCTCTAGACAACTTTCTAGACTCCAGGACCCACATTAATCTTCCTGCCACTGCAGTTTCTGTCTTCTCCAAGAGTCTA-GCTTCTACGAGAACAGAATACTTACATCTT-CTT-----TAAAGAAGAG-----------TTTCCAGTGTAAAGACTTAAAAGTTTAAGTTAATTGTA-- i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788798 186 + 21366645 GCCTTCTTGCAGTAACTGTTTTAAA-CAGTCAGTCTCTAGGAAACTTTCTAGACTCTAGGACCCACATGAATCTTCCTGTCATTTTAGTTTCTGTCTTCTCTTA-GGTCTA-GCTTCTATGAGAACAAAATAGTCACA---T-CTT-----TAAAGAAGAG-----------TTTTCTGTTCAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304748 186 + 13033340 GCCTTCTTGCAGTAACCATTTTAAA-----CAGTCTCTAGACAACTTTCTAGACTCTAGGACACACATTAATCTTTCTGTCATTTTACTTTCTGTCTTCTCTCAGGGCCTG-GCTTCTATGAGGACAAAATAGTCACATCTT-CTT-----TAAAGAAGAG-----------TTTTCTGTTCAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6383973 190 - 11604778 GCTTTCTTGCAGTAACCGTTTTAAA-CAGTCAATCTCTAGACAACTTTCTAGACTCTAGGACCCACATTAATCTTCCTGTCATTTCAGTTTGTGTCTTCTTTCAGGGTCTA-GCTTCTATGAGAACAAAATAGTCACATCTT-CTT-----TAAAGAAGAG-----------TTTTCTGTTCAAAGAC-TAAAAGTTTAAGTTAATTGTA-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36212795 206 - 36342412 GCCTCATTGAAGTAATCATTTTAAA-CATTCAGTCTCTAGATGACTTTGAGGACTATAGGACCTCCATTAATCTTCCCATCATGAGAGTTTCTATCTTCTCTGAGGGTACA-GTGTTTATGAGAACAACATACTCACATCTT-CCTTAAACTAAAAAAGAGTTTCAGGACCATTTCTAACATAAAGAC-TAAAAGTGTAAGTTAACCATA-- i otoGar3.GL873530 C 0 I 104 s canFam3.chr30 26803216 193 - 40214260 GCCTCATCTTAGTGACTAATG--AC-CATTCAGGTTCCATCTAACTTTCTGCAGTGCAGGTCCCAAATTAGCCTTCCTGCCCTAACAGTTTC----------AAGGGTCTA-GCTCTTATGAGAACAAAACAGTCACATGTT-TTTCAAACTAATGAAGAATTTTTGGCCCATTTCCAGTATAGAAAC--AAAAATATAATTTAAGTATA-- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1064948 203 + 2868945 gcttccctgtaatgacttttttTAAACATTCAGTTTCTAGCTAACTTTGTGGACCATAACACCCACATCAAGTTTCCTGTCGTAACCTTTTCTATCTT---TGAGAATCCACAGCTTTATGAGCAAGAAATAGCTACATATTAAAC-----TAAAGAAGAGTTTTAAGTCCATATTCTGTAGAGAGAT-GAAAAGTGTTAGTTAATTGTTAA i dasNov3.JH579377 I 442 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819173 618 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=76771.000000 s hg38.chr14_KI270725v1_random 154759 8 + 172810 AATGAAAG s panTro5.chr1 126781781 8 + 228573443 AATGAAAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393114 8 - 99763055 AATGAAAG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17174 8 + 21985 AATGAAAG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539445 8 + 121039945 AATGAAAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191846 8 - 169600520 AATGAAAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869422 8 - 171882078 AATGAAAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942219 8 + 40200012 AATGAAAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387690 8 - 7633303 AATGAAAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184935 8 + 58131712 AATGAAAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578558 8 - 2620224 AATGAAAG i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788984 8 + 21366645 AATGAAAG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304934 8 + 13033340 AATGAAAG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384163 8 - 11604778 AATGAAAC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213105 8 - 36342412 aatgatgg i otoGar3.GL873530 I 104 I 181 s canFam3.chr30 26803409 8 - 40214260 AGGTAAAG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1065151 8 + 2868945 GAAAAAAG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819173 618 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=2676820.000000 s hg38.chr14_KI270725v1_random 154767 306 + 172810 ACTCCAGTTAGAGGAGAAAATATTTCATTTTCAGATGACTGTTTCAGAACACAATTACTATATTGAAGACGACTCTCACTAT-AG-CCACAATAATTACATCTATTTCAATTTAAGGAGACACAGCAACAAATCTTACCTCTCTGAAAAGAAA-TCAAATCTGAAA-CATGGTGGAGAAGTATGAGTCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTGACTTGTAGCAAATGTTATCTGAAGTAATAAAATCTTACACTTTA--TTTTTATAGAAAACAGACAA-TAAAAA--T-CTTTCTAAATTAATGCA---- s panTro5.chr1 126781789 304 + 228573443 ACTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGTTTCAGAACACAATTACTATATTGAAGATGACTCTCACTAT-AG-CCACATTAATTACATCTATTTAAATTTAAGGAGACACAGCAACAAATCTTACCTCTCTGAAAAGAAA-TCAAATCTGAAA-CATGGTGGAGAAGTATGAGTCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTGACTTATAGCAAATGTTATCTGAAGTAATACAATCTTAC--TTTA--TTTTTATAGAAAAGAGACAA-TAAAAA--T-CTTTCTAAATTAATGCA---- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393122 303 - 99763055 ATTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGTTTCAGAACACAATTACCATATTGAAGATGAATCTCACTAT-AG-CCACATTAATTACATCTATTTCAATTTAAGGGGACACAGTAAAAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGT---GAAGTGTGAGCCCTGACCAAGAG--ATTTTCCTGGAAGACATAGATTGACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA--TTTTTATAGAAAACACGCAA-TAAAAA--T-CTTTCTAAATTAATGCA---- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17182 306 + 21985 ACTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGTTTCAGAACACAATTACTATATTGAAGATGACTCTCACTAT-AG-CCACATTAATTACATCTATTTCAATTTAAGGAGACACAGCAACAAATCTTACCTCTCTGAAAAGAAA-TCAAATCTGAAA-CATGGTGGAGAAGTATGAGTCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTGACTTATAGCAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA--TTTTTATAGAAAACAGACAA-TAAAAA--T-CTTTCTAAATTAATGCA---- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539453 301 + 121039945 ATTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGTTTCAGAACACAATTACTATA-TGAAGATGATTCTCACTAT-AG-CCACGTTAATTACGTCTATTTCAATTTAAGG-GACACAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGT---GAAGCATGATCCCTGACCAAGAG--ATTTTCTTGGAAGACATGGATTGACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA--TTTTTATAGAAAACACGCAA-TAAAAA--T-CTTTCTAAATTAATGCA---- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146191854 307 - 169600520 ATTCCAGTTAGAGGAGAAAACATTTAATTTTAAGATTAATGTTTCAGAACACAATTACTATATTAAAGATGAATCTCACTAT-AG-CCACATTAATTACGTCTATTTCAATTTAAGGGGACACAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGTGGAGAAGCATGAGCCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTAACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA-TTTTTTTTAGAAAACAGGCAG-TAAAAA--T-CTTTCTAAATTAATGCA---- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869430 307 - 171882078 ATTCCAGTTACAGGAGAAAACATTTAATTTTAAGATGAATGTTTCAGAACACAATTACTATATTAAAGATGAATCTCACTAT-AG-CCACATTAATTACGTCTATTTCAATTTAAGGGGACACAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGTGGAGAAGCATGAGCCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTAACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA-TTTTTTTTAGAAAACAGGCAG-TAAAAA--T-CTTTCTAAATTAATGCA---- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942227 307 + 40200012 ATTCCAGTTAGAGGAGAAAACATTTAATTTTAAGATGAATGTTTCAGAACACAATTACTATATTAAAGATGAATCTCACTAT-AG-CCACATTAATTACGTCTATTTCAATTTAAGGGGACACAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAATCTGAAA-CATGGTGGAGAAGCATGAGCCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTAACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA-TTTTTTTTAGAAAACAGGCAG-TAAAAA--T-CTTTCTAAATTAATGCA---- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4387698 308 - 7633303 ATTCCAGTTAGAGGAGAAAACATTTAATTTTAAGATGAATGTTTCAGAACACAATTACTATATTAAAGATGAATCTCACTAC-AG-CCACATTAATTACGTCTATTTCAATTTAAGGGGACACAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGCGGAGAAGCATGAGCCCTGACCAAGAG--ATTTTCTTGGAAGACATAGACTGACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTATTTTTTTTTAGAAAACAGGCAG-TAAAAA--T-CTTTCTAAATTAATGCA---- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36184943 306 + 58131712 ATTCCAGTTAGAGGAGAAAACATTTAATTTTAAGATGAATGTTTCAGAACACACTTACTATATTGAAGATGAATCTCACTAT-AG-CCACATTAATTACGTCTCTTGCAATTTAAGGGGACACAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGTGAAGAAGCATGAGCTCTGACCAAAAG--ATTTTCTTGGAAGACATAGATTGACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA--TTTTTTTAGAAAACAGGCAG-TAAAAA--T-CTTTCTAAATTAATGCA---- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578566 307 - 2620224 ATTCCAGTTAGAGGAGAAAACATTTAATTTTAAGATGAATGTTTCAGAACACAATTACTATATTAAAGATGAATCTCACTAT-AG-CCACATTAATTACGTCTATTTCAATTTAAGGGGACACAGTGACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGAAA-CATGGCGGAGAAGCATGAGCCCTGACCAAGAG--ATTTTCTTGGAAGACATAGATTGACTTATAACAAATGTTATCTGAAGTAGTAAAATCTTACACTTTA-TTTTTTTTAGAAAACAGGCAG-TAAAAA--T-CTTTCTAAATTAATGCA---- i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10788992 280 + 21366645 ATTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGGTTCAGAACACAATTGCTATATTGAAGATGAATTTCACTAT-AG-CCACATTAATTACAACTGTTTCAATTTAAGGGGACATAGTAGCAAATCTTACCTCTCTGAAAGGAAA-TCAAACCTGACA-CACGGTGGAGAAATATG----------------------------AGACATAGATTGACATATAACAAATGTTATCTCGGGTGGTAAAATATTACACTTTA--TTTTTGTAGAAAACATGCAA-TAAAAA--T-CTTTCTAAATTAATGAG---- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9304942 280 + 13033340 ATTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGGTTCAAAACACAATTGCTATACTGAAGATGAATTTCACTAT-AG-CCACATTAATTGCATCTGTTTCAATTTAAGGGAACACAGTAACAAATCTTACCTCTCTGAAAGGAAA-TCAAACCTGACA-CATGGTGGAGAAATATG----------------------------AGACATAGATTGATACATAACAAATGTTATCTCGAGTGCTAAAATCTTACACTTTA--TTTTTATAGAAAACATGCAA-TAAAAA--T-CTTTCTAAATTAATGAG---- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384171 306 - 11604778 ATTCCAGTTAGAGGAGAAAATATTTCATTTTAAGATGAATGTTTCAGAACACAATTGCTATATTCAAGATGAATTTCACTAT-AG-CCACATTAATTACATCTGTTTCAATTTAAGGGGACATAGTAACAAATCTTACCTCTCTGAAAAGAAA-TCAAACCTGACA-CATGGTGGAGAAATATGAGCCCCGACCAAGAG--ATTTTCTCGAAAGACATAGATTGACATATAACAAATGTTATCTTGAGTGGTAAAATCTTACACGTTG--TTTTTATAGAAAACATGCAA-TAAAAA--T-ATTTCTAAATTAATGAG---- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213294 277 - 36342412 ATTCCAGTTAGAGGAGAA------CCATTTTAAAATGAATGGTTCCAGATACGACTACTGTATTGAAGATGACTCTGATTATGGG-CCATGTTAACTATGTCTATTTGGGGTTAAAGGGACATAGTGTCAGCTCTCCCCTCTCTGAATGGGAA-GAAAACCTGAAA-CATCATGATTAGAT----GCTGTACCCAAGAGATATTTTTGTGAAAGACATTAG----------------------TGAAGTAGTAAAATCTTATACTTTA---ATTTTCAGAAAACGTGCAA-TAAAGA--CGATTTCTAAACTTATACA---- i otoGar3.GL873530 I 181 C 0 s canFam3.chr30 26803417 302 - 40214260 ATTCCAATTAGAGGAGAGA------CATTTGAAGATGAATGTTTCAAAATACAACTGCTGTGTTGATG-TGAATCTGGTTAT-GGACCACATTAATTATGCTTATTT-GTTTTGAAGATACAGAGTAACAGGTCATATCTTCTTGAAACGAAATTCAGACCTAAAACCATGGTGGTGAAATGTGAGGCCTAAGCAAGAC--ATATTTGTGGAAGACATGGACTAATCCATAACAAATATCACTTGAAGTAGTAAAATCACAAACTTCA--TTTATTTAGAAAACATACAAGTAAGAA--G-TTTCCTAAATTTATACA---- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1065159 306 + 2868945 AGCCCAGTTTAAGGGGAG------CCATTGTAAGGTGAAAGTTTCAGGAGACGACTGCTATGTTGAAGTTGAATCCAACCAA-GGAACACATTAATTAAGTTTATTTGTGTTCACAGGGACATAGTAACAGATTTTATCTCTCTGAAAGAAAA-TCAAACAAGCAA-CATGGTGATGAAGTGTGAACCCAAACCAAGAG--AACTTGCTG-ACTACATTGATTTTTCTATTACAAATATAATCTGAAGTAGTAAAACTCCATAATTTA--CATTTTTAGAAAACATACAA-TAAAGAAGT-ATTCTAAAATTTATATATACA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819173 618 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=11849.000000 s hg38.chr14_KI270725v1_random 155073 1 + 172810 T s panTro5.chr1 126782093 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393425 1 - 99763055 T i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17488 1 + 21985 T i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5819791 1 + 72422247 C i ponAbe2.chrUn I 618 I 115 s nomLeu3.chr6 53539754 1 + 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192161 1 - 169600520 T i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869737 1 - 171882078 T i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942534 1 + 40200012 T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388006 1 - 7633303 T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185249 1 + 58131712 T i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578873 1 - 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10789272 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305222 1 + 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384477 1 - 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213571 1 - 36342412 T i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803719 1 - 40214260 T i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1065465 1 + 2868945 T i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=198612.000000 s hg38.chr14_KI270725v1_random 155074 27 + 172810 AGGTACT-TTTGTAAAAATAACGT--AAAA s panTro5.chr1 126782094 27 + 228573443 AGGTACT-TTTGTAAAAATAACAT--AAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393426 27 - 99763055 AGGTACT-TTTGTAAAAATAACAT--AAAA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17489 27 + 21985 AGGTACT-TTTGTAAAAATAACAT--AAAA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539755 27 + 121039945 AGGTACT-TTTGTAAAAATAACAT--AAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192162 27 - 169600520 AGGTACT-TTTGTGAAAATAACAT--AAAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869738 27 - 171882078 AGGTACT-TTTGTGAAAATAACAT--AAAC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942535 27 + 40200012 AGGTACT-TTTGTGAAAATAACAT--AAAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388007 27 - 7633303 AGGTACT-TTTGTGAAAATAACAT--AAAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185250 27 + 58131712 AGGTACT-TTTGTGAAAATAACAT--AAAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578874 27 - 2620224 AGGTACT-TTTGTGAAAATAACAT--AAAC i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10789273 29 + 21366645 AGGTACTTTTTATAAAAATCACAT-AAAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305223 29 + 13033340 AGGTACTTTTTGTAAAAATCCCAT-AAAAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384478 29 - 11604778 AGGTACTGTTTGTAAAAATCACAT-AAAAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213572 30 - 36342412 AGGTACTTTTTATGTAAATTATACCCCAAA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803720 29 - 40214260 ATATACTTTCTGTGTAAATCATAT-TACAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1065466 28 + 2868945 AGGCACTTTTAGTATAAATCATAT--ACAG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819792 115 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=699410.000000 s hg38.chr14_KI270725v1_random 155101 88 + 172810 ATGTCTGATTAACTTAGATACATAAGTTATTTAAGTTCCAAAATAAAG-----------AAT--TAGAGAAGTTT----ATAGTTTGTC-----T----GACTTGTA-----------TTCTTTT s panTro5.chr1 126782121 88 + 228573443 ATATCTGATTAACTTAGCTACATAAGTTCTTTAAGTTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----GTAGTTTGTC-----T----GACTTTTA-----------TTCTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393453 88 - 99763055 ATATCTGATTAACTTAGATACACAAGTTCTTTAAGTTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ACAGTTTGTC-----T----GACTTTTA-----------TTCTTTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17516 88 + 21985 ATATCTGATTAACTTAGATACATAAGTTCTTTAAGTTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTCTTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539782 88 + 121039945 ATATCTGATTAACTTAGATACACAAGTTCTTTAAGTTCCAAAATAAAG-----------AAT--GAGAGACGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTCTTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192189 88 - 169600520 ACATCTGATTAACTTAGATACACAAGTTCTTTAAATTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTGTTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869765 88 - 171882078 ACATCTGATTAACTTAGATACACAAGTTCTTTAAATTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTGTTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942562 88 + 40200012 ACATCTGATTAACTTAGATACACAAGTTCTTTAAATTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTGTTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388034 88 - 7633303 ACATCTGATTAACTTAGATACACAAGTTCTTTAAATTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTGTTTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185277 85 + 58131712 ATATCTGATTAACTTAGATACACAAGTTCTTTAAGTTCCAAAATAAAG-----------AAT--GAG---AGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTGTTTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578901 88 - 2620224 ACATCTGATTAACTTAGATACACAAGTTCTTTAAATTCCAAAATAAAG-----------AAT--GAGAGAAGTTT----ATAGTTTGTC-----T----GACTTTTA-----------TTGTTTT i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10789302 95 + 21366645 ATATCTGATTAACTTAGATAGACAAGTTCTTTAAGTTCCATAATAAAG-----------TATAAGAGAGAAGTTT----GTAGTTTATCTCTCTT----GAGTTTTA-----------TTCTTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305252 95 + 13033340 ATATCTGATTAACTTAGATACACAAGTTCTTTAAGTTCCATAATAAAG-----------TATAAGGGAGAAGTTT----ATAGTTTATCTCTATT----GACTTTTA-----------TTCTTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384507 95 - 11604778 AAATCTGATTAACTTAGATACACAAGTTCTTTAAGTTCCATAATAAAG-----------TATAAGAGAGAAGTTT----ATAGTTTATCTCTCTT----GACTTTTA-----------TTCTTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213602 92 - 36342412 ATGTATGATTGACTTAAATATGCAAAT--ATTAAGCTTGGAACTAAAG-----------TACAAATGAAAAGCTT----GTAGTTTGTC-----TCTCGGACGTTTA-----------TCCTTTT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803749 114 - 40214260 GAGTCTGATTAATATAGATATATACATTATTTAAGTTCTAAAGTAACGTTATATTCACTTAA--GAGAGAAGCTTTTGGCTAGTTACTC-----T----GACATGTACTCCCCCCCCCTTTTTTT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819792 115 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=4005.000000 s hg38.chr14_KI270725v1_random 155189 1 + 172810 T s panTro5.chr1 126782209 1 + 228573443 C i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393541 1 - 99763055 C i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5819907 1 + 72422247 C i ponAbe2.chrUn I 115 I 486 s nomLeu3.chr6 53539870 1 + 121039945 C i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192277 1 - 169600520 C i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869853 1 - 171882078 C i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942650 1 + 40200012 C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388122 1 - 7633303 C i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185362 1 + 58131712 C i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578989 1 - 2620224 C i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10789397 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305347 1 + 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384602 1 - 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213694 1 - 36342412 T i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803863 1 - 40214260 T i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e gorGor5.CYUI01005903v1 17604 0 + 21985 C e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=108376.000000 s hg38.chr14_KI270725v1_random 155190 20 + 172810 ---------------GACCCATAATTAATTCCATA s panTro5.chr1 126782210 20 + 228573443 ---------------AATCCATAATTAATTCCATA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393542 16 - 99763055 ---------------AATCCA----TAATTCCATA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17604 20 + 21985 ---------------AATCCATAATTAATTCCATA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539871 16 + 121039945 ---------------AATCCA----TAATTCCATA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192278 16 - 169600520 ---------------AATCCA----TAATTCCATA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869854 16 - 171882078 ---------------AATCCA----TAATTCCATA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942651 16 + 40200012 ---------------AATCCA----TAATTCCATA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388123 16 - 7633303 ---------------AATCCA----TAATTCCATA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185363 16 + 58131712 ---------------AATCTA----TAATTCCATA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2578990 16 - 2620224 ---------------AATCCA----TAATTCCATA i manLeu1.NW_012108674v1 C 0 C 0 s saiBol1.JH378136 10789398 20 + 21366645 ---------------AATCCATCATTAAATCTATA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305348 20 + 13033340 ---------------AATCCATCATTAAATCTATA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384603 20 - 11604778 ---------------AATCCATCATTAAATCTATA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36213695 20 - 36342412 ---------------GATCCATCATTAATTCTATG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803864 33 - 40214260 GATGTACCCCTTTCAAATCCATCATTGATTCTG-- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819908 486 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8404551 1720 - 10629787 I a score=1690816.000000 s hg38.chr14_KI270725v1_random 155210 201 + 172810 GATAGAATAATTTATAATGTAACTTTAATCATTACAACCTTTGATCAAAAATATACAGATATTCTTAATTT---T--TCTTCTC---ATATTTACTTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCCACAATAGTTCACTAAGTTTGGTATTT-----------CTTGGTTTTGTAA----AAAATTTCCCAA-TTCAGCTCCTGA---GCACA s panTro5.chr1 126782230 201 + 228573443 GATAGAATACTTTATAATGTAACTTTAACCATTACATCCTTTGATCAAAAATATACAGATATTCTTAATTT---T--TCTTCTC---ATATTTACTTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCCACAATAGTTCACTAAGTTTGGTATTT-----------CTTGGTTTTGTAA----AAAATTTCCCAA-TTCAGTTCCTGA---GCACA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393558 199 - 99763055 GATAGAATGATTTATAATGTAACTTTAATCATTATATCCTTTGATGAAAAATATACAGATATTCTT--TTC---T--TCTCATT---ATATTTACTTAA---ATTATTTTTCATCACTTTAATATTTCTTTATTCACTGGTACCACAATAGTTCACTAAGTTTGGTATTT-----------CTTGCTTTTGTAA----AAAATTTCCCAA-TTCAGCTCCTGA---GCACA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17624 201 + 21985 GATAGAATAATTTATAATGTAACTTTAATCATTACATCCTTTGATCAAAAATATACAGATATTCTTAATTT---T--TCTTCTC---ATATTTACTTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCCACAATAGTTCACTAAGTTTGGTATTT-----------CTTGGTTTTGTAA----AAAATTTCCCAA-TTCAGCTCCTGA---GCACA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53539887 204 + 121039945 GATAGAATGATTTCTAATGTAACTTTAATCATTACATCCTTTGATGAAAAATATACAGATATTCTTAATTT---T--TCTTCTCATTATATTTACTTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCCACAATAGTTCACTAAGTTTGGTATTT-----------CTTGGTTTTGTAA----AAAATTTCCCAA-TTCAGCTCCTAA---GCACA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192294 193 - 169600520 GATAGAATAATTTATAATGCAACTTTAATCATTATATACTTTGATCAAAAATATACAGATACTCATAATTT---T--TCTTCTC---ATAT----TTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCTACAATAG----CTAAGTTTGGTAT--------------TTGTTTTTTTTTTTT-TAAAATTCCCAG-TTCAGCTCCTGA---GCACA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147869870 196 - 171882078 GATAGAATAATTTATAATGCAACTTTAATCATTATATACTTTGATCAAAAATATACAGATACTCATAATTT---T--TCTTCTC---ATAT----TTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCTACAATAG----CTAAGTTTGGTATTT-----------CTTGTTTTTTTTTTTT-AAAAATTCCCAG-TTCAGCTCCTGA---GCACA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942667 197 + 40200012 GATAGAATAATTTATAATGCAACTTTAATCATTATATACTTTGATCAAAAATATACAGATACTCATAATTT---T--TCTTCTC---ATAT----TTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCTACAATAG----CTAAGTTTGGTATTT-----------CTTGTTTTTTTTTTTTAAAAAATTCCCAG-TTCAGCTCCTGA---GCACA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388139 195 - 7633303 GATAGAATAATTTATAATGCAACTTTAATCATTACATACTTTGATAAAAAATATACAGATACTCATAATTT---T--TCTTCTC---ATAT----TTAA---ATTATTTTTCATCACTTTAATATTTCTTTATTCACTGGTCCTATAATAG----CTAAGTTTGGTATTT-----------CTTGTTTTTTTTTAA--AAAAATTCCCAG-TTCAGCTCCTGA---GCACA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185379 195 + 58131712 GATAGAATAATTTATAATGCAACTTTAATCATTATATCCTTTGATAAAAAATATACAGATACACATAATTT---T--TCTTCTC---ATAC----TTAA---ATTATTTTTCATCCCTTTAATATTTCTTTATTCACTGGTCCCAAAATAG----CTAAGTTTGGTATTT-----------CTTGTTTTTTTTAAA--AAAAATTCCCAA-TTCAGCTCCTGA---GCACA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579006 195 - 2620224 GATACAATAATTTATAATGCAACTTTAATCATTACATACTTTGATCAAAAATATACAGATACTCATAATTT---T--TCTTCTC---ATAT----TTAA---ATTATTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCTACAATAG----CTAAGTTTGGTATTT-----------CTTGTTTTTTTAAAA--AAAAATTCCCAG-TTCAGCTCCTGA---GCACA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406271 198 - 10629787 GATAGAATAATTTATAATGCAACTTTAATTATTACATCCTTTGATCAAAAATACACAGATACTCATAATTT---T--TCTTCTC---ATAT----TTAA---ATTAGTTTTCATCGCTTTAATATTTCTTTATTCACTGGTCCCACAATAGCTCACTAAGTTTGGTATTT-----------CTTGTTTTTTTAAA---AAAAATTCCCAA-TTCAGCTCCTGA---GCACA i colAng1.NW_012121598v1 I 1720 C 0 s saiBol1.JH378136 10789418 201 + 21366645 GACAGAACAATTTATGATGTAACTTTAATCATTACATCCTTTGATCAAAAATATATAGACATTCTTAACTG---T--TCTCATT---ATATTTACTTAA---ATTATTTTTTATCACTTTAATGTTTCTTTTTTCACTGCTCACACAATAGTTCACTGAGTTTGACATTT-----------CTTGGTTTTTAAA----AAAAATTTccaa-ttcagctcctga---gcaca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305368 201 + 13033340 GACAGAATAATTTATGATAAAGCTTTAATCATTACATCCTTTGATCAAAAATATATAGATATTCTTAATTG---T--TCTCATT---ATATTTACTTAA---ATTATTTTTTATCACTTTAATGTTTCTTTTTTCATTGCTCACACAATAGTTCACTGAGTTTGGTATTT-----------CCTGGTTTTTAAA----AAAATTTCccaa-ttcagctcctaa---gcaca i cebCap1.NW_016107324v1 C 0 I 11 s aotNan1.NW_018501505v1 6384623 204 - 11604778 GACAGAATAATTTATAATGTAACTTTAATCATTACATCCTTTGATCAAAAATATATAGATATTCTTAATTGTTCT--TCTCATT---ATATTTACTTAA---ATTATTTTTTATCACTTTAATGTTTCTTTATTCACTGCTCACACAATAGTTTACTGAGTTTGGTATTT-----------CTTGGTTTTTAAA----AAAATTTCccaa-ttcagctcctga---gcaca i aotNan1.NW_018501505v1 C 0 I 13 s otoGar3.GL873530 36213715 215 - 36342412 GACAGAATCACTTATAGCATAACTTTA---ATTCCACTTTTTGATC-AAATTCTACAAACATTCTTAATTT---TTCTCTCCTT---ATATTTATTTAACCTCTTTTTTTTTATTGCTTTAACCTTTCTCTTTTCTCTGGTCCCATAGTAC--CACCAAGCTTGGTAGTTTCTTTGTTTCATTTGGTTTTGTTT----AAATTTTCTAAAGCTCAGCTCTCAATATTCACA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26803897 193 - 40214260 GGCAGAATATTTTATAATGTGACTTTAATCATTGCATCTTTTTATCAGGAATCTATA---ATTCTCAATTT---T--CTTTGTT---TTAT---ATTAA---GTTCTTCATTATTGGTTTAATCTTTCTCTATCCCCTGGTCCCACAATACTTAGCTAAATTTTTTTTTG-----------ATCATTGTTGTTT----AAA--TTTCCAA-TTTTGCTCCAAA---GCCCA i canFam3.chr30 C 0 I 3 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819908 486 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=80618.000000 s hg38.chr14_KI270725v1_random 155411 17 + 172810 ATT---AGT-ACTCTTCTCTC s panTro5.chr1 126782431 17 + 228573443 ATT---AGT-ACTCTTCTCTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393757 15 - 99763055 ATG---AGTAACTCTTCT--- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17825 17 + 21985 ATT---AGT-ACTCTTCTCTC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540091 18 + 121039945 ATG---AGTAACTCTTCTCTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192487 17 - 169600520 ATA---AGC-ACTCTTCTCTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870066 17 - 171882078 ATA---AGC-ACTCTTCTCTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942864 17 + 40200012 ATA---AGC-ACTCTTCTCTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388334 17 - 7633303 ATA---AGT-ACTCTTCTCTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185574 20 + 58131712 ATAAGTAGT-ACTCTTCTCTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579201 17 - 2620224 ATA---AGT-ACTCTTCTCTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406469 17 - 10629787 ATA---CCT-ACTCTTCTCTC i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10789619 16 + 21366645 ctg---agt-gcta-tctctc i saiBol1.JH378136 C 0 I 218 s otoGar3.GL873530 36213930 17 - 36342412 CTG---AAT-GTTCTTTTCTC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26804093 17 - 40214260 ATC---GGT-ATTTTTTCCTG i canFam3.chr30 I 3 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819908 486 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e aotNan1.NW_018501505v1 6384827 13 - 11604778 I e cebCap1.NW_016107324v1 9305569 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=720769.000000 s hg38.chr14_KI270725v1_random 155428 108 + 172810 CTCTTCCTTTGTATTCTTTTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTACCATTTAACCGTTATTCATTTCTC------- s panTro5.chr1 126782448 108 + 228573443 CTCTTCCTTTGTATTCTTTTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATATTCTTTCTTCT----TCCTACCATTTAACCATTATTCATTTTTC------- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393772 108 - 99763055 CTCTTCCTTTGTATTCTTCTTTGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGACAAGAATGTTCTTTCTTCT----TCCTGCTATTTAACCATTATTCATTTTTC------- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17842 107 + 21985 CTCTTCCTTTGTATTCTTTTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTACCATTTAACCATTATTCATTT-TC------- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540109 108 + 121039945 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTGCCATTTAACCGTTATTCATTTTTT------- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192504 108 - 169600520 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTGCCATTTAACCATTATTCATTTTTC------- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870083 108 - 171882078 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTGCCATTTAACCATTATTCATTTTTC------- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942881 108 + 40200012 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTGCCATTTAACCATTATTCATTTTTC------- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388351 108 - 7633303 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTGCCATTTAACCATTATTCATTTTTC------- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185594 108 + 58131712 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGACTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTAT----TCCTGCTATTTAACCATTATTCATTCTTC------- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579218 108 - 2620224 CTCTTCCTTTGTATTCTTCTTAGGTCCAACCCCATGGCTTTCCTTTTGTACTCTCTAGGCCAAGAATGTTCTTTCTTCT----TCCTGCCATTTAACCATTATTCATTTTTC------- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406486 107 - 10629787 CTCTTCCTTTGCATTCTTCTTA-GTCCAACCCCATGGCTTTCCTTTGGTACTCTCCAGACCAAGAATGTTCTTTCTTCT----TCCTGCCATTTCACCATTATTCATTTTTC------- i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36213947 108 - 36342412 TCCCTCCTATATAATCTTAT---GTCTAACTCTATGACTTTCTTTTCATGTTATCTTGACCAAGAATGCTCTTTCTTCTC-CACCTTGCCATTCAGATATTATGCATTCTTC------- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26804110 110 - 40214260 TCCTTCCCATGCATTCTT-----ATCAAACCCCATGGCTTCTCTTTTGTGTTTTTCTTGCCAA-AATGTTCTTTCTTCTCATATCCTGCCAT---ATTATTAGCCATCCTTCTATTGAC i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819908 486 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e aotNan1.NW_018501505v1 6384827 13 - 11604778 I e cebCap1.NW_016107324v1 9305569 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=159525.000000 s hg38.chr14_KI270725v1_random 155536 28 + 172810 ATGGCtgtattagtccgctttcacactg s panTro5.chr1 126782556 28 + 228573443 ATGGCtatattagtacattttcacactg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393880 28 - 99763055 ATGGCtgtattagtctgttttcacacta i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17949 27 + 21985 ATGGCtgtattagtcc-ttttcacactg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540217 28 + 121039945 ATGGCtgtattagtccgttttcacactg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192612 28 - 169600520 ATGGCtgtattagtccattttcacactg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870191 28 - 171882078 ATGGCtgtattagtccattttcacactg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26942989 28 + 40200012 ATGGCtgtattagtccattttcacactg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388459 28 - 7633303 ATGGCtgtattagtccattttcacactg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185702 28 + 58131712 ATGGCtgtattagtccattttcacactg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579326 28 - 2620224 ATGGCtgtataagcccattttcacactg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406593 28 - 10629787 ATGGCtgtattagtccattttcacacta i colAng1.NW_012121598v1 C 0 C 0 s canFam3.chr30 26804220 27 - 40214260 -TGACTAAATTTACCTCTTTCCTCACCT i canFam3.chr30 C 0 I 399 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819908 486 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e otoGar3.GL873530 36214055 0 - 36342412 C e aotNan1.NW_018501505v1 6384827 13 - 11604778 I e cebCap1.NW_016107324v1 9305569 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=578126.000000 s hg38.chr14_KI270725v1_random 155564 112 + 172810 tcataaaagactttcctgagactgggtaatttataaaggaaaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttaccatgatagtgggagga s panTro5.chr1 126782584 112 + 228573443 tcataaaagacttttctgagactaggtaatttataaaggaaaaaaggtttaattgactcaccgttctgcatgctggagaggcctcaggaaacttaccatgatggtgggagga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55393908 111 - 99763055 ccataaaagactttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctagagaggcctcaggaaacttacaatgatggtgggaggg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 17976 112 + 21985 tcataaaagactttcctgagactgggtaatttataaaggaaaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttaccatgatggtgggagga i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540245 111 + 121039945 ccataaaagactttcctgagactgggtaatttataaagg-aaaaagctttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatggtgggaggg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192640 111 - 169600520 tcataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatggtgggaggg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870219 111 - 171882078 tcataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatggtgggaggg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943017 111 + 40200012 tcataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatggtgggaggg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388487 111 - 7633303 tcataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatagtgggaggg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185730 111 + 58131712 tcataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatggtgggaggg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579354 111 - 2620224 tcataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcacagttctgcatgctggagaggcctcaggaaacttacaatgatggtgggaggg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406621 61 - 10629787 ttataaaagaatttcctgagactgggtaatttataaagg-aaaaaggtttaattgactcaca-------------------------------------------------- i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5819908 486 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e otoGar3.GL873530 36214055 0 - 36342412 C e aotNan1.NW_018501505v1 6384827 13 - 11604778 I e cebCap1.NW_016107324v1 9305569 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=7800.000000 s hg38.chr14_KI270725v1_random 155676 1 + 172810 g s panTro5.chr1 126782696 1 + 228573443 g i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394019 1 - 99763055 g i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18088 1 + 21985 g i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5820394 1 + 72422247 g i ponAbe2.chrUn I 486 I 242 s nomLeu3.chr6 53540356 1 + 121039945 g i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192751 1 - 169600520 g i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870330 1 - 171882078 g i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943128 1 + 40200012 g i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388598 1 - 7633303 g i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185841 1 + 58131712 g i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579465 1 - 2620224 g i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406682 1 - 10629787 g i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e otoGar3.GL873530 36214055 0 - 36342412 C e aotNan1.NW_018501505v1 6384827 13 - 11604778 I e cebCap1.NW_016107324v1 9305569 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=465584.000000 s hg38.chr14_KI270725v1_random 155677 102 + 172810 aagcagacacatcttctatggtggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaacccatcagatctcttgagaacttaa s panTro5.chr1 126782697 102 + 228573443 aagcagacacatcttttatggtggaaggcaagggagaaagtaagcatgtgaaggaagagctgtcaaacacttaaaaacccatcagatgtcttgagaacttaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394020 65 - 99763055 aagcagacatgtcttatatggcgac-ggcaagggagaaagtaagcacatgaaggagga-----------------------------------agaactt-a i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18089 102 + 21985 aagcagacacatcttctatggtggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaacccatcagatctcttgagaacttaa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540357 65 + 121039945 aagcagacatgtcctatatggcgac-ggcaagggagaaagtaagcacgtgaaggagga-----------------------------------agaactt-a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192752 101 - 169600520 aagcagacatgtcttctatggtggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaaaccatcagatctcttgagaactt-a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870331 101 - 171882078 aagcagacatgtcttctatggcggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaaaccatcagatctcttgagaactt-a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943129 101 + 40200012 aagcagacatgtcttctatggcggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaaaccatcagatctcttgagaactt-a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388599 101 - 7633303 aagcagacatgtcttctatggcggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaaaccatcagatctcttgagaactt-a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185842 101 + 58131712 aagcagacatgtcttctatggcggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacactcataaaaccatcagatctcttgagaactt-a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579466 101 - 2620224 aagcagacatgtcttctagggcggcaggcaagggagaaagtaagcatgtgaaggaggaactgtcaaacacttataaaaccatcagatctcttgagaactt-a i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406683 101 - 10629787 aagcagacatgtcttacatggcgtcaggcaagggagaaagtaagcacgtgaaggaggaactgtcaaacacttataaaaccatcagatctcttgagaactt-a i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5820395 242 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e otoGar3.GL873530 36214055 0 - 36342412 C e aotNan1.NW_018501505v1 6384827 13 - 11604778 I e cebCap1.NW_016107324v1 9305569 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=1030268.000000 s hg38.chr14_KI270725v1_random 155779 134 + 172810 ctcattatcatgagaacagcatgggggaagctgctgtcatgatccaatcacctcccaccaggttccttcctttatatgtggggattacaattcaagacgagatttgggtggggacacagagccaaaccatatca s panTro5.chr1 126782799 134 + 228573443 ctcattatcatgagaacagcatgggggaagctgctcccatgatccaatcacctcccacgaggttccttcctttatatgtggggattacaattcaagatgagagttgggtggggacacagagccaaaccatatca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394085 134 - 99763055 ctcattattatgagaacagcatgggggaagctgctcccatgatccaatcaccgcccaccaggttccttcctttacatgtggggattacaattcgagatgagatttgggtgggcacgcagagccaaaccatatca i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18191 134 + 21985 ctcattatcatgagaacagcatgggggaagctgctcccatgatccaatcacctcccaccaggttccttcctttacatgtggggattacaattcaagatgagatttgggtggggacacagagccaaaccatatca i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540422 134 + 121039945 ctcattatcatgagaacagcatggtggaagctgctcccatgattcaatcacctgccaccaggttccttcctttacatgtggggattacaattcgagatgagatttgggtggagacacagagccaaaccatatca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192853 134 - 169600520 ctcattatcatgagaacagcgtgggggaagctgctcccatgatccaatcacctcccaccagtctccttcctttacatgtggggattacaatttgaggtgagatttgggtggggacacagagccaaaccatatca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870432 134 - 171882078 ctcattatcatgagaacagcgtgggggaagctgctcccatgatccaatcacctcccaccagtctccttcctttacatgtggggattacaatttgaggtgagatttgggtggggacacagagccaaaccatatca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943230 134 + 40200012 ctcattatcatgagaacagcgtgggggaagctgctcccatgatccaatcacctcctaccagtctccttcctttacatgtggggattacaatttgaggtgagatttgggtggggacacagagccaaaccatatca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388700 134 - 7633303 ctcattatcataagaacagcatgggggaagctgctcccatgatccaatcacctcccaccagtctccttcctttacatgtggggattacaatttgaggtgagatttgggtggggacacagagccaaaccatatca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36185943 134 + 58131712 ctcattatcatgagaacagcatgggggaagctgctcccatgatccaatcaccttccaccaggctccttcctttacatgtggggattacaatttgaggtgagatttgggtagggacacagacccaaaccatatca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579567 134 - 2620224 ctcattatcatgagaacagcatgggggaagctgctcccatgatccaatcatctcccaccagtctccttcctttacatgtggggattacaatttgaggtgagatttgggtggggacacagagccaaaccatatca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406784 134 - 10629787 ctcatgatcatgagaacagcacgggggaagctgctcccatgatccaatcaccttccaccaggctccttcctttacatgtggggattacaattcgaggtgagatttgggtggggacccagggccaaaccatatca i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 9305580 133 + 13033340 ctcactatcatgagaacagcatgggggaaactgctcccatgatctaatcacctcccaccaggttcctt-ctttacaggtggggattaccattagagatgagatttgggtggggacacagaaccaaaccatgtca i cebCap1.NW_016107324v1 I 11 C 0 s aotNan1.NW_018501505v1 6384840 133 - 11604778 ctcactatcatgagaacagcatgggggaaactgctcccatgatctaatcacctcccaccaggttcctt-ctttacaggtggggattaccattcaagatgagatttgggtggggacacagaaccaaatcgtatca i aotNan1.NW_018501505v1 I 13 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5820395 242 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e otoGar3.GL873530 36214055 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I a score=59402.000000 s hg38.chr14_KI270725v1_random 155913 6 + 172810 ATGGCC s panTro5.chr1 126782933 6 + 228573443 ATGGCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394219 6 - 99763055 ATGGCC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18325 6 + 21985 ATGGCC i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540556 6 + 121039945 ATGGCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192987 6 - 169600520 ATGGCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870566 6 - 171882078 ATGGCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943364 6 + 40200012 ATGGCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388834 6 - 7633303 ATGGCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186077 6 + 58131712 ACGGCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579701 6 - 2620224 ATGGCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406918 6 - 10629787 ATGGCC i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 9305713 6 + 13033340 ATGGCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384973 6 - 11604778 ATGGCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214055 6 - 36342412 ATGGCC i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5820395 242 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e calJac3.chr10 107991450 1301 - 132174527 I a score=31974.000000 s hg38.chr14_KI270725v1_random 155919 5 + 172810 -AAAAT s panTro5.chr1 126782939 5 + 228573443 -AAAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394225 5 - 99763055 -AAAAT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18331 5 + 21985 -AAAAT i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5820637 5 + 72422247 -AAAAT i ponAbe2.chrUn I 242 I 456 s nomLeu3.chr6 53540562 5 + 121039945 -AAAGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192993 5 - 169600520 -AAAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870572 5 - 171882078 -AAAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943370 5 + 40200012 -AAAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388840 5 - 7633303 -AAAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186083 5 + 58131712 -AAAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579707 5 - 2620224 -AAAAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406924 5 - 10629787 -AAAAT i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 9305719 5 + 13033340 -AACat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6384979 5 - 11604778 -AACAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214061 4 - 36342412 CAAC-- i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e calJac3.chr10 107991450 1301 - 132174527 I a score=65199.000000 s hg38.chr14_KI270725v1_random 155924 10 + 172810 AATATATATT s panTro5.chr1 126782944 10 + 228573443 AATATATATT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394230 10 - 99763055 AATATATATT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18336 10 + 21985 AATATATATT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540567 10 + 121039945 AATATATATT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146192998 10 - 169600520 AATGTATGGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870577 10 - 171882078 AATGTATGTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943375 10 + 40200012 AATGTATGTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388845 10 - 7633303 AATGTATGTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186088 10 + 58131712 AATCTATGTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579712 10 - 2620224 AATGTATGTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406929 10 - 10629787 AATGTATGTT i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 9305724 10 + 13033340 aatatatata i cebCap1.NW_016107324v1 C 0 I 16 s aotNan1.NW_018501505v1 6384984 10 - 11604778 AATATATATA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214065 10 - 36342412 AGTTTTTATT i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5820642 456 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e saiBol1.JH378136 10789635 218 + 21366645 I e calJac3.chr10 107991450 1301 - 132174527 I a score=1846063.000000 s hg38.chr14_KI270725v1_random 155934 206 + 172810 TTTCTTTTCTCATCTATTCCT-----GACTA-TGTCCTTTCTGAATTTCTTCCATACTTTCAACCTGACCCACAAAAGGCAGAGCTTACTAATATTTCTTATCCTGTTATTTAAAAATTAATTTTGCttgagtttgagaataatagtcaataggcaggggacaagcaggccatcaacagc-------atcctttattttggcagaaattattctgaatc s panTro5.chr1 126782954 206 + 228573443 TTTCTTTTCTCATCTATTCCT-----GACTG-TGTCCTTTCTGAATTTCTTCCATATTTTCAACCTTCCCCACAAAAGGCAGAGCTTACTCATGTTTCTTATCCTGTTATTCAAAAATTAATTTTGCttgagtttgagaataatagtcaataggcaggggacaagcaggccatcaacagc-------atcctttattttggcagaaattattctgaatc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394240 206 - 99763055 TTTCTTTTCTTATCTATTCCT-----GACTA-TGTCCTTTCTGAATTTCTTCAGTACTTTCAACCTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTATCCTGTTATTTAAAAATTAATTTTGTTTTAGTTTGAgaataacagtccataggcaggggatgagcaggccatcaacagc-------atcctttattttggcagaaattattctgaatc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18346 206 + 21985 TTTCTTTTCTCATCTATTCCT-----GACTA-TGTCCTTTCTGAATTTCTTCCATACTTTCAACCTGCCCCACAAAAGGCAGAGCTTACTCATATTTCTTATCCTGTTATTTAAAAATTAATTTTGCttgagtttgagaataatagtcaataggcaggggacaagcaggccatcaacagc-------atcctttattttggcagaaattattctgaatc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540577 206 + 121039945 TTTCTTTTCTCATCTTTTCCT-----GACTA-TGTCCTTTCTGAATTTCTTCAGTACTTTCAACCTGTCCCACAAAAGGCATAGCTTATCCATATTTCTTACCCTGTTATTTAAAAATTAATTTTCTTTTAGTTTGAGAATAACAGCCAATAGGCAGGGGATGAGCAGGCCATCAACAGC-------ATCCTTTATTGTGGCAGAAATTATTCTGAATC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193008 205 - 169600520 TTTCTTTTCTCATCTATTTCT-----GATTA-TGTCC-TTCTGAATTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTAACCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAgaataatagtcaataggcaggggatgagcaggccatcaacagc-------atcctttatcttggcagaaattattctgtgtc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870587 205 - 171882078 TTTCTTTTCTCATCTATTTCT-----GATTA-TGTCC-TTCTGAATTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTAACCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAgaataatagtcaataggcaggggatgagcaggccatcaacagc-------atcctttatcttggcagaaattattctgtgtc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943385 205 + 40200012 TTTCTTTTCTCATCTATTTCT-----GATTA-TGTCC-TTCTGAATTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTAACCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAgaataatagtcaataggcaggggatgagcaggccatcaacagc-------atcctttatcttggcagaaattattctgtgtc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4388855 205 - 7633303 TTTCTTTTCTCATCTATTTCT-----GATTA-TGTCC-TTCTGAATTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTAACCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAgaataatagtcaataggcaggggatgagcaggccatcaacagc-------atcctttatcttggcagaaattattctgtgtc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186098 205 + 58131712 TTTCTTTTCTCATCTATTTCT-----GACTA-TGTCC-TTCTGAACTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTATCCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAGAATAATAGCCaataggcaggggatgagcaggccatcaacagc-------atcctttattttggcagaaattattctgtgtc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579722 205 - 2620224 TTTCTTTTCTCATCTATTTCT-----GATTA-TGTCC-TTCTGAATTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTCTTAACCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAgagtaatagtcaataggcaggggatgagcaggccatcaacagc-------atcctttatcttggcagaaattattctgtgtc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8406939 205 - 10629787 TTTCTTTTCTCATCTATTTCT-----GACTA-TGTCC-CTCTGAATTTCTTCAGTACTTCCAAACTGTCCCACAAAAGGCAGAGCTTATTCATATTTTTTATCCTGTTATTTAAAAATTAATTTTGCTTTAGTTTGAGAATAATGGTCaataggcaggggatgagcaggccatcaacagc-------atcctttgttttggcagaaattattctgtgtc i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10789853 210 + 21366645 TTTTTTTTCTCATCTATTCCTACCTAGACTA-TGTCCATTCTGAATTTCTTCAGTATTTACAAGCTGTACCACAAAAGGAAGAACTTATTTACATTTCTTAACCTGTTATTT-AAAATTAATTTTGCTTTAGTTTGAGAATAATAGTCAATGGGCAGGGTACAAGCAGGCCATCAACAGC-------AGCCTTTATTTTGTCAGAAATTATTCTGAATC i saiBol1.JH378136 I 218 C 0 s cebCap1.NW_016107324v1 9305750 210 + 13033340 TTTTttttctcatctattcctacctagacta-tgtcctttctgaatttcttcagtatttacaagctgtaccacaaaaggaagaacttatttccatttcttatattgttattt-aaAATTAATTTTGCTTTAGTTTGAgaataatagtcaataggcaggggacaagcaggccatcaacagc-------agcctttattttggcagaaattatactgaatc i cebCap1.NW_016107324v1 I 16 C 0 s aotNan1.NW_018501505v1 6384994 206 - 11604778 --TTttttctcatctattcctacctagacta-tgtcctttctgcattccttcagtatttacaagctgtaccacaaaaggaagaacttatttatatTTCTTATCCT-TTATTT-AAAATTAATTTTGC-TTAGTTTGAGAATCATAGTCaataggcagggaacaagcaggccatcaacagc-------agcctttattttggcagaaatttttctgaatc i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214075 218 - 36342412 -TTTTTCCTTCATGTGTTCCCATCTTGATCACTGTCCTTTGTGAATTCCTTCAGTACTTACAACCTGTCCTTCAAAAGGCAGCAGTGTGTTCTATTTCTTAACCTGCTATTTGAAAACGTTTTTTGCTTTAGTGTTAGAACAATGGTCAGTAGACAGGGGACAAGCAGGCCAGCAGTAGCCTTTAGTACCCTTTATCTTGGTAGAAATTATTCGGAGTC i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5820642 456 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804247 399 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=2292836.000000 s hg38.chr14_KI270725v1_random 156140 233 + 172810 aaacttaccttg--tcatgggtataattacatgatctcaaaaagaattaaaaatctctatcacttgaaccacagtttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTGCTTAGTACATATTGAGAGAGTTGGACCCCATGGCCTCCCAACTTGCTCAGGAATGG-- s panTro5.chr1 126783160 233 + 228573443 aaacataccttg--tcatgggtataattacatgatctcaaaaagaattaaaaatctctatcacttgaaccacagtttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTTGTACATATTGAGAGAGTTGGACCCTATGGCTTCCCAACTTGCTCAGAAATGG-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394446 235 - 99763055 aaacttaccttgtatcatgggtataattacatgatctcaaaaagaattaaaaatctctatcacttgaaccacagtttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATTCTTTGACAAAAGTATCTCTGTTTCATTAGTACATATAGACAGAGTTGGACCCTATGGCTTCCCAGCTTGCTCAGGAATCG-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18552 233 + 21985 aaacttaccttg--tcatgggtataattacatgatctcaaaaagaattaaaaatctctatcacttgaaccacagtttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTAGTACATATTGAGAGAGTTGGACCCTATGGCTTCCCAACTTGCTCAGGAATGG-- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53540783 235 + 121039945 AAACTTACCTTATATCATGGGTATAATTATATGATCTCAAAAAGAATTAAAAATCTCTATCACTTGAACCACAATTTCCCTTAGCATATTTAATATACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGACAAAAGTATCTCTGTTTCATTAGTACATATAGAGAGAGTTGGACCCTATGGCTTCCCAGCTTGCTCAGAAATGG-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193213 231 - 169600520 aaacttaccttgtatcatgggtataattacatggtctcaaaaagaattacaaatctctatcacttgaaccacaatttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTAGTGCATAC----AGAGTTGGACCCTATGGCTTCCCAGCTTGCTCAGGAATGG-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147870792 231 - 171882078 aaacttaccttgtatcatgggtataattacatggtctcaaaaagaattacaaatctctatcacttgaaccacaatttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------ATTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTAGTGCATAC----AGAGTTGGACCCTATGGCTTCCCAGCTTGCTCAGGAATGG-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943590 231 + 40200012 aaacttaccttgtatcatgggtataattacatggtctcaaaaagaattacaaatctctatcacttgaaccacaatttcccttagcatatttaataTGCTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTAGTGCATAC----AGAGTTGGACCCTATGGCTTCCCAGCTTGCTCAGGAATGG-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389060 231 - 7633303 aaacttaccttgtatcatgggtataattacatggtctcaaaaagaattacaaatctctatcacttgaaccacaatttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTAGTGCATAT----AGAGTTGGACCATATGGCTTCCCAGCTTGCTCAGGAATGG-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186303 234 + 58131712 aaacttaccttgtatcatgggtataattacatggtctcaaaaagaattacaaatctctattacttgaacaacaatttctcttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAGAGTATCTCTGTTTCATGAGTGCATATAGAGAGAGTTGGACCCTATGGCTTCCCAGCTTGCTCAGGAAT-G-- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2579927 231 - 2620224 aaacttaccttgtatcatgggtataattacatggtctcaaaaagaattacaaatctctatcacttgaaccacaatttcccttagcatatttaataTACTTCACTTTTGTCAGCTAACAAATGttagctaatat-------ttttaccatcaagaagaatatcctttggcaaaagtatctctgtttcattagtgcatat----agaaTTGGACCCTATGGCTTCCCAGCTTGCTCAGGAATGG-- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407144 235 - 10629787 aaacttaccttgtatcatgggtataattacatggtctcaaaaataattacaaatctctatcacttgaaccacaatttcccttagcatatttaataTACTTCATTTTTGTCAGCTAACAAATGTTAGCTAACAT-------TTTTACCATCAAGAAGAATATCCCTTGGCAAAAGTATCTCTGTTTCATTAGTGCATATGGATAGAGTTGGACCCTATGGCTTCCCAGCTTGCTTAGGAATGG-- i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790063 234 + 21366645 AAATTTACCTTGTATTATGGATATAATTACATGATCTCAAAAATGATTAAAAGTCTCTATCACTTGAACCACAGTTTCCCTTAGCATATTGAATATATCTCATTTTTGTCAGCCAATAAATGTTAGCTAATAT-------TTTTACCATTAAGAAGAATATCCTTTAGCAAAAGTATCTCTGTTTCATTAGTATATATAGAGATAGTTGGATCGTATGGCTTCCAAGTTTGCTCAGGAAC-G-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9305960 234 + 13033340 aaatttaccttatctcatgggtataattacatgatctccaaaatgattaaaagtctctatcacttgaagcacagtttcccttagcataTTGAATATATCTCATTTTTGCCAGCTAACGAATGTTAGCTAATAT-------TTTTACCATTAAGAAGAATATCCTTTGGCAAAAGTATCTCTGTTTCATTAGTACATATAGAGACAGTTGGATCCTATGGCTTCCAAGTTTGCTCAGGAGT-G-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385200 234 - 11604778 aaatttaccttgtatcatgggtataactacatgatctcaaaaatgattaaaagtctctatcacttgaaccacagtttcccttagcataTTGAATATATCTCATTTTTGTCAGCTAACAAATGTTAGCTAATAT-------TTTTACCATCAAGAAGAATATCCTTTGGCAAACGTATCTCTGTTTCATTAGTACATATAGAGACAGTTGGACCCTATGGCTTCCAAGTTTGCTCAGGAAC-A-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214293 222 - 36342412 AAACTTATCATGTATCATGGCTATAATTACGGCATCTCAAAAATGATTAAAATTCTTCATCAC-TGAACCACAGTTTCCCTTAACATATTTCATATACCT--TTTATATTAGCTAACA---------TAATAC-------TTTTTCTACCAAGAGAAATGTTGTTTGGCAAAAGTGTCTGTATCTCACTAGTATATATAGGTAAGGTTGGACCC-ATGGCTTCCCACCTTGCATAGAAAGCA-- i otoGar3.GL873530 C 0 I 1 s canFam3.chr30 26804646 234 - 40214260 aAACTTACCTTGTATTACTACTCTAAGTACATTATCTCAAAAAGGACTG-AAATTTCCATCA-TTGATTCACAGTTTTTCTTTGCATATTTACTGTACTTTTTTCTTTTT---TAACA--TAATATTTAATATCATAATATTTCAATATCATGAA-AATGTCCTTTGGCAAAAATATTTCCATTTCACTCATATATATAG--AAGTTTGGACCTGGTGACTTCATAGCTTGCTCAGGAAGTAGG i canFam3.chr30 I 399 C 0 e eulFla1.LGHW01000825v1 857516 2046 - 1089701 I e eulMac1.LGHX01000819v1 849247 2046 - 1078805 I e ponAbe2.chrUn 5820642 456 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=10785.000000 s hg38.chr14_KI270725v1_random 156373 1 + 172810 A s panTro5.chr1 126783393 1 + 228573443 G i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394681 1 - 99763055 G i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18785 1 + 21985 G i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541018 1 + 121039945 G i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193444 1 - 169600520 G i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871023 1 - 171882078 G i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943821 1 + 40200012 G i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389291 1 - 7633303 G i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186537 1 + 58131712 G i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580158 1 - 2620224 G i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407379 1 - 10629787 G i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790297 1 + 21366645 G i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306194 1 + 13033340 G i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385434 1 - 11604778 G i aotNan1.NW_018501505v1 C 0 C 0 s eulMac1.LGHX01000819v1 851293 1 - 1078805 A i eulMac1.LGHX01000819v1 I 2046 I 3517 s eulFla1.LGHW01000825v1 859562 1 - 1089701 A i eulFla1.LGHW01000825v1 I 2046 I 3517 s otoGar3.GL873530 36214516 1 - 36342412 G i otoGar3.GL873530 I 1 C 0 s canFam3.chr30 26804880 1 - 40214260 G i canFam3.chr30 C 0 C 0 e ponAbe2.chrUn 5820642 456 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=61434.000000 s hg38.chr14_KI270725v1_random 156374 6 + 172810 GAAGCT s panTro5.chr1 126783394 6 + 228573443 GAAGCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394682 6 - 99763055 GAAGCT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18786 6 + 21985 GAAGCT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541019 6 + 121039945 GAAGCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193445 6 - 169600520 GAAGCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871024 6 - 171882078 GAAGCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943822 6 + 40200012 GAAGCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389292 6 - 7633303 GAAGCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186538 6 + 58131712 GAAGCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580159 6 - 2620224 GAAGCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407380 6 - 10629787 GAAGCT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790298 6 + 21366645 GTAGCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306195 6 + 13033340 GTAGCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385435 6 - 11604778 GTAGCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214517 6 - 36342412 GAAGGC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26804881 6 - 40214260 GAAGTT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5820642 456 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=13923.000000 s hg38.chr14_KI270725v1_random 156380 1 + 172810 A s panTro5.chr1 126783400 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394688 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18792 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5821098 1 + 72422247 A i ponAbe2.chrUn I 456 I 552 s nomLeu3.chr6 53541025 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193451 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871030 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943828 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389298 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186544 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580165 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407386 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790304 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306201 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385441 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214523 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26804887 1 - 40214260 A i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=186933.000000 s hg38.chr14_KI270725v1_random 156381 16 + 172810 GGGTATCCAGATAGGT s panTro5.chr1 126783401 16 + 228573443 GGGTACCCAGATAGGT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394689 16 - 99763055 GGGTACCCAGATAGGA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18793 16 + 21985 GGGTACCCAGATAGGT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541026 16 + 121039945 GGGTACCCAGATAGGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193452 16 - 169600520 GGGTACCCAGATAGGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871031 16 - 171882078 GGGTACCCAGATAGGT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943829 16 + 40200012 GGGTACCCAGATAGGT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389299 16 - 7633303 GGGTACCCAGATAGGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186545 16 + 58131712 GGGTACCCAGATAGGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580166 16 - 2620224 GGGTACCCAGATAGGT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407387 16 - 10629787 GGGTACCCAGATAGGT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790305 16 + 21366645 GGGTACCCAGATGGGT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306202 16 + 13033340 GGGTACCCAGATGGGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385442 16 - 11604778 GGGTACCCAGATGGGT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214524 16 - 36342412 GGGCACCCAGATAGGC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26804888 16 - 40214260 GGGCACCCAGGTGGGT i canFam3.chr30 C 0 I 4140 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821099 552 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=3132245.000000 s hg38.chr14_KI270725v1_random 156397 342 + 172810 AATCTTCTGTTATGATACTTATATGCTGACTGTACACGGTGTCAAAT----CTGGGTC----------TTGACCTAGCAGGCACACATTAACACAACATGAAGGAAGTAAAAAGTCATTTATG-AAACTACAATGGCTGCAGTAGTTATTTGGTAGTCCTC-TTTTAAAAATTTCCTTTTAATTGAAATGAAAGTTTATAAGTGATCATACTGTAAATGATATGACATTTTATAATGTTTTATTACAAAAACTCAAACACTCCAGGAGTGAATTAAATGTAAATTGAAATCTTCCTCTCTCTACAATTCCACTTGCCTCATCATTTCCTCTATTCCTTAGAAATCCAC---CGACAATTTA- s panTro5.chr1 126783417 346 + 228573443 AATCTTCTGTTTTGATACTTATATCCTGACTGTACACAGTGTCAAAT----CTGGGTC----------TTGACCTAGCAGGCACACATTAACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTACAATGGCTGCAGTAGTCATTTGGTAGTCCTCTTTTTAAAAATTTCCTTTTAATTGAAATGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCCAGGAGTGAATTAAATGTAAGTTGAAATCTCCCTCTCTCTACAATCCCACTTGCCTCATCATTTCCTCTATTCCTTAGAAATCCACTGACAACAATTTA- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55394705 346 - 99763055 AATCTTCTGTTTTGATACTTATATCCTGACTGTACACAGTGTCAAAT----CTGGGTC----------TTGACCTAGTAGGCACCCATTAACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTACGATGGCTGCAGTAGTTATTTGGTAGTCCTCTTTTTAAAATTTTCCTTTTAATTGAAATGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCCAGGAGTGAATTAAATGTAAATTAAAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCATTTCTTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 18809 346 + 21985 AATCTTCTGTTTTGATACTTATATCCTGACTGTACACAGTGTCAAAT----CTGGGTC----------TTGACCTAGCAGGCACACATTAACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTACAATGGCTGCAGTAGTTATTTGGTAGTCCTCTTTTTAAAAATTTCCTTTTAATTGAAATGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCCAGGAGTGAATTAAATGTAAATTGAAATCTCCCTCTCTCTACAATCCCACTTGCCTCATCATTTCCTCTATTCCTTAGAAATCCACCGACAACAATTTA- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541042 359 + 121039945 AATCTTCTGTTTTGATACTTATATCCTGACTGTACACAGTGTCAAATTATATTTGATCTACATTATATTTGACCTAGTAGGCACCCATTAACACAACATGAAGGAA-CAAAAAGTCATTTATG-AAACTATGATGGCTGCAGTAGTTATTTGGTAGTCCTCTCTTTAAAATTTTCCTTTTAATTGAAATGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCCAGGAGTGAATTAAATGTAAATTGAAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCATTTCCTCTGTTCCTTAGAAATCCACCATCAAAAATTTA- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193468 341 - 169600520 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAGTGTTAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTGACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTGCAGTAGTCATTTGGTAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTTTATAAGTGATCGTACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCTGGGAGTGGATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871047 341 - 171882078 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAGTGTTAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTGACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTGCAGTAGTCGTTTGGTAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCTGGGAGTGGATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26943845 341 + 40200012 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAATGTTAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTGACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTGCAGTAGTCATTTGGTAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCTGGGAGTGGATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389315 341 - 7633303 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAGTGTTAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTGACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTACAGTAGTCATTTGGTAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCTGGGAGTGGATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186561 341 + 58131712 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAGTGTCAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTAACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTGTAGTAGTCATTTGATAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTTTTTAAGTGATCATAGTCTAAATTATATAACATTTTATAATGTTTTATTAGAAAAACTCAAACAGTCTGGGAGTGAATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580182 341 - 2620224 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAGTGTTAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTGACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTGCAGTAGTCATTTGGTAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTTTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCTGGGAGTGGATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAAAACACCAACAAAAATTTA- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407403 341 - 10629787 AATCTCCTGTTTTGATACTTATATCCTGACTGTACCCAGTGTCAAAT----CTGGGTC----------TTGACCTAGTGGGCACCCATTAACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTATGATAGCTGCAGTAGTCATTTGGTAGTTCTCTTTTTAAAAATTTCCTTTTAAT-----TGAAAGTGTATAAGTGATCATACTGTAAATGATATAACATTTTATAATGTTTTATTACAAAAACTCAAACACTCTGGGAGTTAATTAAATGTAAATTGGAATCTCCCTCTCTCTACAATCCCACTTGCCTCACCAATTCCTCTATTCCTTAGAAATCCACCAACAAAAATTTA- i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790321 346 + 21366645 AAACTTCTGTTTTGATACTTATATCTTGACTGTACACAGTGTCAAAT----CTGGGTC----------TTGACCTAGTAGGCAGCCATTAACACAACATGAAGGAAGGAAAAAGTCATTTATG-AAACTGTGATGGCTGCAGTTGTTACTTGGTAGTCCTCtttttaaaaattttattttaattGAAATGAAAATTTCTAAGTGCTCATAGTGGAAATGATATAACATATTATAATGTTTTACTTCAAAAATTCAAACACTCCAAAAGTAAATTAAATGTAAATTGAAATCTCCATCTCGCTACAATCCCACTTGCCTCACAATTTCCTCTATTCCTCAGAAATCCATCAACAAAAATTTA- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306218 346 + 13033340 AAACTTCTGTTTTGATACTTATATCTTGACTGTACACAGTGTCAAAT----CTGGGTC----------TTGACCTAGTAGGCAGCCATTAACACGACATGAAGGAAGGAAAAGGTCATTTATG-AAATTGTGATGGGTGCAGTTGTTATTTGGTAGTCTTCTTTTTAAAAATTTTATTTTAATTGAAATGAAAGTTTATAAGTGATCATAGTGGAAATGATATAACATTTTATAATGTTTTACTTCAAAAATTCAAACACTCCAAAAGTAAATTAAATGTAAATTGAAATCTCCATCCCTCTACAATCCCACTTGCCTCACCATTTCCTCTATTCCTTAGAAATCCGCCAACGAAAATTTA- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385458 346 - 11604778 AAACTTCTGTTTTGATACTAATATCTTGACTGTACACAGTGTCAAAT----CTGGGTC----------TTGACCTAGTAGGCAGCCATTAACACAACATGAAGGAAGGAAAAAGTCACTTATG-AAACTATGATGGCTGCAGTTGTTATTTGCTAGTCCTCTTTTTATAAATTTTATTTCAATTGAAATGAAAGTTTATAAGTGATCATAGTGCAAATGATATAACATTTTATAATGTTTTACTTCAAAAATTCAAACACTCCAAAAGTAAATTAAATGTAAATTGAAATCTGCATCTCTCTACAATCTCACTTGCCTCACCATTTCCTCCATTTCTTAGAAATCCACCAACAAAAATTTA- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214540 326 - 36342412 AATCCTTATTTTCTACGTTTACATCCTCATTGCACACAGAATGGAAT----CTCATTC----------TTGCCCTAGTAGGCACCAATTAACAAGACATGAGGGAAGGAAAAAGTCGCTAATGAAAACTATAAT-GCTGCAGTTTTCACCTGGTGTTC--------------TTCCTTTAAATTGAAATAAAATTTTATAAATGCTGATATTACAAATGATATAACATTTT---ATGTTTGGTTATAGAAACTCAG----TCTCAAAGTGGATTGAATATAAATTGAAAGTTCCTCCTCTCCACAATTCTACGTCTCTTACCCTTCTCTCTGTTCCTTAGAAACTCACCAATAAAAATTTGA i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821099 552 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 90696 7249 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=10424.000000 s hg38.chr14_KI270725v1_random 156739 1 + 172810 A s panTro5.chr1 126783763 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395051 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19155 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541401 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193809 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871388 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944186 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389656 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186902 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580523 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407744 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790667 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306564 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385804 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 97945 1 + 145891 G i tarSyr2.KE933570v1 I 7249 I 7045 s otoGar3.GL873530 36214866 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821099 552 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e calJac3.chr10 107991450 1301 - 132174527 I a score=361778.000000 s hg38.chr14_KI270725v1_random 156740 48 + 172810 TTAGAACTCAAATACTCTCACTCATAAAACACATATGTGTACTTTTTT-- s panTro5.chr1 126783764 48 + 228573443 TTAGAACTCAAATACTCTCACTCATAAAATGCATATGTGTATTTTTTT-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395052 49 - 99763055 TTAGAACTCAAATACTTTCACTCATAAAAGGCATATGTGTACCTTTTT-A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19156 48 + 21985 TTAGAACTCAAATACTCTCACTCATAAAACGCATATGTGTACTTTTTT-- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541402 49 + 121039945 TTAGAACTCAAATACTTTCACTCATAAAAGGTATATGTGTACCTTTTT-A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193810 48 - 169600520 TTAGAACT--AATACTTTCACTCATAAAAGGCGTATGTGTACCTTTTTTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871389 48 - 171882078 TTAGAACT--AATACTTTCACTCATAAAAGGCGTATGTGTACCTTTTTTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944187 48 + 40200012 TTAGAACT--AATACTTTCACTCATAAAAGGCGTATGTGTACCTTTTTTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389657 48 - 7633303 TTAGAACT--AATACTTTCACTCATAAAAGGCGTATGTGTACCTTTTTTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186903 50 + 58131712 TTAGAACTCAAATACTTTCACTCATAAAAGGCATATGTGTACCTTTTTTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580524 48 - 2620224 TTAGAACT--AATACTTTCACTCATAAAAGGCGTATGTGTACCTTTTTTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407745 50 - 10629787 TTAGAACTCAAATACTTTCACTCATAAAAGGCATATGTGTACCTTTTTTT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790668 50 + 21366645 TTAGAACTCAGATACTTTCACTCATAAAGGACATATGCATATATTTTTAC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306565 50 + 13033340 TTAGAACTCAGATACTTTCACTCATAAAAGACATATGCATATATTTTTAC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385805 50 - 11604778 TTAGAACTCAGATACTTTCACTCATAAAAGACATATGCGTACCTTTTTAC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214867 48 - 36342412 TTATAATCCCAA-ACTCCAACTCATAGTAGACATAGACATGTACATTT-A i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821099 552 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e dasNov3.JH579377 1065494 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=1357983.000000 s hg38.chr14_KI270725v1_random 156788 142 + 172810 AAAAATGAGATTATGCTAATTATGATTTGTAGTGAACTGATA-TTTCATTTGAAAATACATTGGATATCTTGCCGTCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGTA-TTTTTATAAAACATATCTATTGAAAATTC s panTro5.chr1 126783812 143 + 228573443 AAAAATGGGATTATGCTAATTATGATTTGTAGTGACCTGATA-TTTCATTCGAAAATACATTGGATATCTTGCCGTCA----------------------------------TTTAAATTGACTGTAAAATGTTAATTTTTACCAGTATTTTTTATAAAACATATCCATTGAAAATTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395101 142 - 99763055 AAAAATTGGATTATGCTAATTGTGATTTGTAGTTACCTGATA-TTTCATACAAAAATACATTGGACATGTTGCCATCA----------------------------------TTTAAAATGACGGTAAAATGTTAATTTTTACCATTA-TTTTTATAAAACATATCTATTGAAAATTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19204 142 + 21985 AAAAATGGGATTATGCTAATTATGATTTGTAGTGACCTGATA-TTTCATTCGAAAATACATTGGATATCTTGCCGTCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGTA-TTTTTATAAAACATATCTATTGAAAATTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541451 142 + 121039945 AAAAACTGGATTATGCTAATTATGATTTGTAGTTACCTGATA-TTTCATTCAAAAATACATTGGACATGTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTCTTACCATTA-TTTTTATAAAATGTATCTATTGAAAATTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146193858 142 - 169600520 AAAAACGAGATTAGGCTAATTATGATTTGTAATGACCTGACA-TTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGCA-TTTTTATAAAACATATCTATTGAAAATTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871437 142 - 171882078 AAAAACGAGATTAGGCTAATTATGATTTGTAATGACCTGACA-TTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGCA-TTTTTATAAAACATATCTATTGAAAATTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944235 142 + 40200012 AAAAATGAGATTAGGCTAATTATGATTTGTAATGACCTGACA-TTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGCA-TTTTTATAAAACATATCTATTGAAAATTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389705 142 - 7633303 AAAAATGAGATTAGGCTAATTATGATTTGTAATGACCTGACA-TTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGTA-TTTTTATAAAACATATCTATTGAAAATTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36186953 142 + 58131712 AAAAATGAGATTAGGCTAATTATGATTTGTAGTGACCTGACA-TTTCATTCAAAAATACATTGCACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTCATTTTTACCAGTA-TTTTTATAAAACATATCTATTGAAAATTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580572 142 - 2620224 AAAAATGAGATTAGGGTAATTATGATTTGTAATGACCTGACA-TTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGTA-TTTTTATAAAACATATCTATTGAAAATTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407795 142 - 10629787 AAAAATGAGATTAGGCTAATTATGATTTGTAGTGACCTGACA-TTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAATGTTAATTTTTACCAGTA-TTTTTATAAAACATATCTATTGAAAATTT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790718 142 + 21366645 AAAAGAAGGGTTATGCTCATGATGATTTGTAGTGACCTGAGA-GTTCATTCAAAAATACGTTGGACATCTTTACATCA----------------------------------TTTAAAATGACTGTTAAGTGTTAATTTTTACCAGTA-TTTTTATAAATCATTTCTATTGAAAATTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306615 142 + 13033340 AGAAATAGGGTTATGCCAGTGATTATTTGTAGTGACCTGATA-GTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAGTGTTAATTTTAACCAGTA-TTTTAATAAATTATTTCTATTGAAAATTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385855 142 - 11604778 AAAAATAGGGTTATGCTAATAATGATTTGTAGTGACCTGATA-GTTCATTCAAAAATACATTGGACATCTTGCCATCA----------------------------------TTTAAAATGACTGTAAAGTGTTAATTTTTACCGGTA-TTTTTATAAATTATTTCTATTGAAAATTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36214915 176 - 36342412 AAACATGAGATTATAGTAATTATTATGTGCAGTGACCTAATG-TTTCATTCAAAAATGCATTAAACATTTCACCATTATTTAAAAAAAAATGACTACACATTTAATCATTGTTTTAAAATGACTGTAAAGTCGCAGTTTTTACCTGCA-TTTAAACAAATTAGAACTGGTGAAAATTT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1065494 141 + 2868945 AAAAATAAA--TGCACAATTTTTAATTTGTAATTACCTATGACTTTCACTCCAAAATACATTTAACATCTTACCATTA---------------------------------GTTTTAAATGACTACAAAGCATTAATTTT-ACCTACA-TTTAAATGAAGCATAACTGATGAAAATTT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821099 552 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=25772.000000 s hg38.chr14_KI270725v1_random 156930 2 + 172810 AA s panTro5.chr1 126783955 2 + 228573443 AA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395243 2 - 99763055 AA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19346 2 + 21985 AA i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5821651 2 + 72422247 AA i ponAbe2.chrUn I 552 I 274 s nomLeu3.chr6 53541593 2 + 121039945 AA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194000 2 - 169600520 AA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871579 2 - 171882078 AA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944377 2 + 40200012 AA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389847 2 - 7633303 AA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187095 2 + 58131712 AA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580714 2 - 2620224 AA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407937 2 - 10629787 AA i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790860 2 + 21366645 AA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306757 2 + 13033340 AA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6385997 2 - 11604778 AA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36215091 2 - 36342412 AA i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1065635 2 + 2868945 AG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=1870541.000000 s hg38.chr14_KI270725v1_random 156932 207 + 172810 GTCATTACCATCT--TTGCATTTTTT--TAAACTTGTATAATGAACAGCTTTGCAAATATTAGTTAGCACACTGCTTCAATTATTTAA-TAGAGATCTAATCTGAGGAGTTCAGAATTTTCAACTCTTTCTCAGGACCATTCCTTTGGAGTGATTCTGGAAATGTAGGTTATTTTTGGTTGTATCAATGATGGAGACATGGCAAGCACTTA-C s panTro5.chr1 126783957 200 + 228573443 GTCATTACCATCT--TTGCATTTTTC-ATAAACTTGTATAATGAACAGCTTTGCAAATATTAGTTAGCACACTTGTTCAATTATTTAA---------TAATCTGAGGAGTTGAGAATTTTCAACTCTTTCTCAGGACCATTCCTTTGGAGTGATTTTGGAAATGTAGGTTATTTTTGGTTGTATCAATGATGGAGACATGACAAGCACTTA-C i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395245 206 - 99763055 GACATTACCATCT--TTGCATTTTTTTATAAACTTGTATAATGAACAGCTTTACAAATA----TTAGCACACTTGTTCAATTATTTAA-TAGAGATCTAATCTGAGGAGTTGAGAACTTTCGACTCTTTCTcaggaccattcctctggagtaattttggaaatgtaggttatttttggttgtatcaatgatggggacatgacaagcatttacc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19348 208 + 21985 GTCATTACCATCT--TTGCATTTTTT-ATAAACTTGTATAATGAACAGCTTTGCAAATATTAGTTAGCACACTTGTTCAATTATTTAA-TAGAGATCTAATCTGAGGAGTTGAGAATTTTCAACTCTTTCTcaggaccattcctttggagtgattttggaaatgtaggttatttttggttgtatcaatgatggagacatgacaagcactta-c i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541595 210 + 121039945 GACATTACCATCT--TTGCAGTTTTTTATAAACTTGTATAATGAACAGCTTTACAAATATTAGTTAGCGCACTTGTTCAATTACTTAA-TAGAGATCTAATCTGAGGAGTTGAGAATTTTTGACGCTTTCTcaggaccattcctttggagtgattttggaaatgtaggttatttttggctgtaacaatgatggggacatgacaagcacttacc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194002 210 - 169600520 GACATTACCATCT--TTGCATTTTTTAATAAATTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGTTGAGAATTTTCAAGTCTTTCTcaggaccattcctttgaagtgattttggaaatgtaggttatttttggttgtatcaatgatggagacatgacaagcacttacc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871581 210 - 171882078 GACATTACCATCT--TTGCATTTTTTAATAAATTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGTTGAGAATTTTCAAGTCTTTCTCAGGACCATTCCTTTGAAGTGATTTTGGAAATGTAGGTTATTTTTGGTTGTATCAATGATGGAGACATGACAAGCACTTACC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944379 210 + 40200012 GACATTACCATCT--TTGCATTTTTTAATAAATTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGATGAGAATTTTCAAGTCTTTCTcaggaccattcctttgaagtgattttggaaatgtaggttatttttggttgtatcaatgatggagacatgacaagcacttacc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4389849 210 - 7633303 GACATTACCATCT--TTGCATTTTTTAATAAATTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGTTGAGAATTTTCAAGTCTTTCTcaggaccattcctttgaagtgattttggaaatgtaggttatttttggttgtatcaatgatggagacatgacaagcacttacc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187097 210 + 58131712 GACATTACCATCT--TTGCATTTTTTTATAAACTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGTTGAGAATTTTCAACTCTTTCTCAGGACTATTCCTTTGAAGTGATTTTGGAAATGTAGGTTATTTTTGGTTGTATCAATGATGGAGACATGACAAGCACTTACC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580716 210 - 2620224 GACATTACCATCT--TTGCATTTTTTAATAAATTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGTTGAGAATTTTCAAGTCTTTCTcaggaccattcctttgaagtgattttggaaatgtaggttatttttggttgtatcaatgatggagacatgacaagcacttacc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8407939 210 - 10629787 GACATTACCATCT--TTGCATTTTTTTATAAACTTGTATAGTGAACAGCTTTGCAAATATTAGTTAGCATACTTGTTCAATTATTTAA-TAGAGATCCACTCTGAGGAGTTGATAATTTTCAACTCTTTCTcaggaccattcctttgaagtgattttggaaatgtaggttatttttggttgtatcaatgatggagacatgacaagcactttcc i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10790862 207 + 21366645 AACATTACCAACT--TTGCA-TTTTTTATAGACTTGTAAAATGAACAG-TTTGCAAATATTAATTAGCACACTTGTTGAATTATTTCA-TAAGGATCTAAACTGAAGAGTTGAGAGTTTTCAACTCTTTCTCAGGACCATTCCTTTGGAGTGATTTTCGAAATGTAGGTTCTTTTTGGTTGTATTAATGACAGAGACATGATAAGCACTTAC- i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 9306759 203 + 13033340 AACA-TACCAACT--TTGCA-TTTTTTATAAACTTGTATAATGAACAGCTTTGCAAAT----ATTAGCACACTTGTTCAATTATTTAA-TAAGGATCTAAACTGAAGAGTTGAGAGTTTTCAACTCTTTCTCAGGACCATTCCTTTGGAGTGATTTTCGAAATGTAGGTTCTTTTTGGTTGTATGTATGACGGAGACATGATAAGCACTTAC- i cebCap1.NW_016107324v1 C 0 I 11 s aotNan1.NW_018501505v1 6385999 209 - 11604778 AATATTACCAACT--TTGCATTTTTTTATAAACTTGTATAATGAACAGCTTTGCAAATATTAGTTAGCACACTTGTTCAATTATTTAATTAAGGATCTAAACTGAAGAGTTGAGAGTTTTCAACTGTTTCTCAGGACCATTCCTTTGGAGTGATTTTCGAAATGTAAGTTC-TTTTGGTTGTATTAATGATGGAGACATGATAAGCACTTAC- i aotNan1.NW_018501505v1 C 0 I 11 s otoGar3.GL873530 36215093 195 - 36342412 GCTGTTACCATTTTATTTCATTTTTC-ACAAAC--AAATTATAAACAGCCTTACAAATATTAGGTAACGTGCACAATCAACTGTTTAA-GAAGGATCTAATTGAGGCAGTTGAGAGTTTTCAACTCTTTCGCAGGATCACTCCTTTAGAATGCTCTTGTGAAAACGGGCCATGCGGGGCTGTAGGAATT--------------AGCACTTTAC i otoGar3.GL873530 C 0 I 1 s dasNov3.JH579377 1065637 193 + 2868945 GGTATTTTCATTT--TTTCTTTTTAT-ATGCAATTGTGAAACGAACAGCCTTGGACATATTTGTT-GCA-ACTTGTACAATTATTTAA-TAGGGTTAACACCTAAGAAG--AAGAATT---GAGTGTTTTTCAG------TCCCTTAGAGTGCCTTTAGAAACATGG--TATTGTTGGTTGTGTCAATGACTGGGACATGACTAACATTTAC- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821653 274 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=66756.000000 s hg38.chr14_KI270725v1_random 157139 10 + 172810 AAGTAAAGGG- s panTro5.chr1 126784157 10 + 228573443 AAGTAAAGTG- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395451 10 - 99763055 aactagaggg- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19556 10 + 21985 aagtaaaggg- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541805 10 + 121039945 aagtagaggg- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194212 10 - 169600520 aagtagaggg- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871791 10 - 171882078 AAGTAGAGGG- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944589 10 + 40200012 aagtagaggg- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390059 10 - 7633303 aagtagaggg- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187307 10 + 58131712 AAGTAGAGGG- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580926 10 - 2620224 aagtagaggg- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408149 10 - 10629787 aagtaaaggg- i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10791070 10 + 21366645 AAGTGGAGGG- i saiBol1.JH378136 I 1 C 0 s otoGar3.GL873530 36215289 10 - 36342412 AAGTAGAGGT- i otoGar3.GL873530 I 1 C 0 s dasNov3.JH579377 1065830 6 + 2868945 -----CAGGGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821653 274 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=309586.000000 s hg38.chr14_KI270725v1_random 157149 56 + 172810 TAGAGATCACATGCAGCATGCATTGGGCC--AAACAGTGCATTGAGACAAACAGTCCT s panTro5.chr1 126784167 56 + 228573443 TAGAGATCACATGCAGCATGCATTGGGCC--AAACAGTGCATTGAGACAAACAGTCCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395461 56 - 99763055 tagagatctcatgcagcaggcattgggtc--aaacagtgcattgagacaaacagtcct i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19566 56 + 21985 tagagatcacatgcagcatgcattgggcc--aaacagtGCATTGAGACAAACAGTCCT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541815 56 + 121039945 tagagatcacatgcagcatgcattgggtc--aaacagtgcattgagacaaacagtcct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194222 56 - 169600520 tagagatcacatgcagcatgcattgggcc--aaacagtgcattgagccaaacagtcct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871801 56 - 171882078 TAGAGATCACATGCAGCATGCATTGGGCC--AAACAGTGCATTGAGCCAAACAGTCCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944599 56 + 40200012 tagagatcacatgcagcatgcattgggcc--aaacagtgcattgagccaaacagtcct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390069 58 - 7633303 tagagatcacatgcagcatgcattgggccaaaaacagtgcattgagcgaaacagtcct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187317 56 + 58131712 TACAGATCACATGCAGCATGCATTGGGCC--AGACAGTGCATTGAGCCAAACAGTCCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580936 56 - 2620224 tagagatcacatgcagcatgcattgggcc--aaacagtgcattgagccaaacagtcct i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408159 56 - 10629787 tagagatcacatgcagcatacattgggcc--aaacagtgcactgagccaaacagtcct i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36215299 39 - 36342412 TAGCGATAATGAGCAGTCTGCAGTAGGGC--AGATAGTCCC----------------- i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1065836 22 + 2868945 TAG-------------------------C--ATATCCTCCACTGAGTCT--------- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821653 274 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=119894.000000 s hg38.chr14_KI270725v1_random 157205 14 + 172810 ATATAAGGAAGAAT s panTro5.chr1 126784223 14 + 228573443 ATACAAGGAAGAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395517 14 - 99763055 atataaggaagaat i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19622 14 + 21985 ATATAAGGAAGAAT i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5821927 14 + 72422247 ATATAAGGAAGAAT i ponAbe2.chrUn I 274 C 0 s nomLeu3.chr6 53541871 14 + 121039945 acataaggaagaat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194278 14 - 169600520 atataaggaagaat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871857 14 - 171882078 ATATAAGGAAGAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944655 14 + 40200012 atataaggaagaat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390127 14 - 7633303 atataaggaagaat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187373 14 + 58131712 ATATAAGGAAGAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2580992 14 - 2620224 atataaggaagaat i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408215 14 - 10629787 atataaggaagaat i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36215338 14 - 36342412 GTACAAGGAACAAT i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1065858 14 + 2868945 GCACAAGGAAGCAT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58110999 2593 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=141859.000000 s hg38.chr14_KI270725v1_random 157219 19 + 172810 TGCTTCTTATG-----AAGGCCCA s panTro5.chr1 126784237 19 + 228573443 TGCTTCATATG-----AAGGCCCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395531 19 - 99763055 tgCTTAGTATG-----AAGGCCCA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19636 18 + 21985 TGCTTC-TATG-----AAGGCCCA i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5821941 19 + 72422247 TGCTTTGTATG-----AAGGCCCA i ponAbe2.chrUn C 0 I 157 s nomLeu3.chr6 53541885 19 + 121039945 tgCTTAGTATG-----AAGGCCCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194292 19 - 169600520 tgCTTAGTATC-----AAGGCCCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871871 19 - 171882078 TGCTTAGTATC-----AAGGCCCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944669 19 + 40200012 tgCTTAGTATC-----AAGGCCCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390141 19 - 7633303 tgCTTAGTATC-----AAGGCCCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187387 19 + 58131712 TGCTTAGTATG-----AAGGCCCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581006 19 - 2620224 tgCTTAGTATC-----AAGGCCTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408229 19 - 10629787 tgCTTAGTATG-----AAGGCCCA i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36215352 19 - 36342412 TGTTTAGTCTG-----AAGGCCCA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58113592 24 - 182113224 tgcctcttatAGATTTAAAGCCTA i mm10.chr2 I 2593 C 0 s dasNov3.JH579377 1065872 19 + 2868945 TGTTTAGTCTG-----ATGGGCCC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=833461.000000 s hg38.chr14_KI270725v1_random 157238 118 + 172810 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTATTTCACGGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAAATTA-- s panTro5.chr1 126784256 115 + 228573443 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTATTTCACTGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTGTTGGTCTTATAATCTGCAAA---A-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395550 115 - 99763055 ATAGTATCTCTTGGAGAAACATGGCAACATGAAGTATTTCACTGTGTACTTTAAG---AAAGGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19654 115 + 21985 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTATTTCACGGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53541904 115 + 121039945 ATAGTACCTCTTGGAGAAACATGGCAGCATGAAGTATTTCACTGTCTACTTTAAG---AAAGGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194311 115 - 169600520 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTACTTCACTGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147871890 115 - 171882078 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTACTTCACTGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944688 115 + 40200012 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTACTTCACTGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390160 115 - 7633303 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTACTTCACTGTTTACTTTAAG---AAATGTTGCACTATTTGTACATTTTACAATAAATATCTATTGATCTTATAATCTGTAAA---A-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187406 115 + 58131712 ATAGTACCTCTTGGAGAAAGATGGCGACATGAAGTACTTCACTGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581025 115 - 2620224 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTACTTCACTGTCTACTTTAAG---AAATGTTGCACTATTTGTGCATTTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408248 115 - 10629787 ATAGTACCTCTTGGAGAAACATGGCAACATGAAGTACTTCACTGTCTACTTTAAG---AAATGTTGCAGTATTTGTGCAATTTACAATAAATATCTATTGATCTTATAATCTGCAAA---A-- i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36215371 115 - 36342412 ATAGTATCCCATGGATAAACATGGTAGCATGAAGTATTTCACTGTCTATGTTAAT---ACATTTTGTACTACTTGTGAATTTTACAACAACCATCTATTACTTCTATTATCTCAAAA---A-- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58113616 118 - 182113224 GCTGTAGCTCTTAGAAAAGTGTGGTGGCCTTAAGGATTTCACTATCTACCTTAAGAAAAAAAAAAGCACTACCTGTATATTTTGCAATAAACATCTGACACATTCACCATTTGCAAA---A-- i mm10.chr2 C 0 I 3 s dasNov3.JH579377 1065891 86 + 2868945 TTAGTACCCCTTGGAGAAACATGAC---------------------------------ACACACTATACTA-TTGCATATTTTACAGTACGCATGTATTGCACTTCTAATTTGCAAA---AAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821960 157 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=111490.000000 s hg38.chr14_KI270725v1_random 157356 17 + 172810 TAATATACTATTATTTA s panTro5.chr1 126784371 17 + 228573443 CGATATACTATTATTTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395665 17 - 99763055 CAATGTACTATTATTTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19769 17 + 21985 CAATATACTATTATTTA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542019 17 + 121039945 CAATATACTATTATTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194426 17 - 169600520 CAATATACTGTTATTTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872005 17 - 171882078 CAATATACTGTTATTTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944803 17 + 40200012 CAATATACTGTTATTTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390275 17 - 7633303 CAATATACTATTATTTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187521 17 + 58131712 CAATATGCTATTATTTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581140 17 - 2620224 CAATATACTATTATTTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408363 17 - 10629787 CAATATACTACTATTTA i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36215486 17 - 36342412 ATATATACTCTCATTTA i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1065977 17 + 2868945 AAATATTCTTCCATTTA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821960 157 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=12732.000000 s hg38.chr14_KI270725v1_random 157373 2 + 172810 AA s panTro5.chr1 126784388 2 + 228573443 AA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395682 2 - 99763055 AA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19786 2 + 21985 AA i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542036 2 + 121039945 AA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194443 2 - 169600520 AA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872022 2 - 171882078 AA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944820 2 + 40200012 AA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390292 2 - 7633303 AA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187538 2 + 58131712 AA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581157 2 - 2620224 AA i manLeu1.NW_012108674v1 C 0 I 4 s colAng1.NW_012121598v1 8408380 2 - 10629787 AA i colAng1.NW_012121598v1 C 0 C 0 s dasNov3.JH579377 1065994 2 + 2868945 AG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821960 157 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e otoGar3.GL873530 36215503 0 - 36342412 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=-7452.000000 s hg38.chr14_KI270725v1_random 157375 5 + 172810 GTTCT s panTro5.chr1 126784390 5 + 228573443 GTTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395684 5 - 99763055 GAttt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19788 5 + 21985 GTTCT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542038 5 + 121039945 GAttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194445 3 - 169600520 ttt-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872024 3 - 171882078 Att-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944822 3 + 40200012 GAt-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390294 3 - 7633303 GAt-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187540 3 + 58131712 GAt-- i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8408382 3 - 10629787 GAt-- i colAng1.NW_012121598v1 C 0 C 0 s dasNov3.JH579377 1065996 5 + 2868945 GATTT i dasNov3.JH579377 C 0 I 460 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821960 157 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e otoGar3.GL873530 36215503 0 - 36342412 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e manLeu1.NW_012108674v1 2581159 4 - 2620224 I a score=-29.000000 s hg38.chr14_KI270725v1_random 157380 18 + 172810 TTTTTGTTTTGTtttgtt s panTro5.chr1 126784395 13 + 228573443 T-----Ttttgttttttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395689 7 - 99763055 t-----tttttt------ i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19793 13 + 21985 T-----TTTTGTTTTGtt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542043 5 + 121039945 t-----tttt-------- i nomLeu3.chr6 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5821960 157 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e otoGar3.GL873530 36215503 0 - 36342412 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8408385 0 - 10629787 C e manLeu1.NW_012108674v1 2581159 4 - 2620224 I e chlSab2.chr26 36187543 0 + 58131712 C e cerAty1.NW_012000887v1 4390297 0 - 7633303 C e macNem1.NW_012010577v1 26944825 0 + 40200012 C e macFas5.chr7 147872027 0 - 171882078 C e rheMac8.chr7 146194448 0 - 169600520 C a score=-8559.000000 s hg38.chr14_KI270725v1_random 157398 8 + 172810 tttgttt-----c s panTro5.chr1 126784408 8 + 228573443 tttgttt-----g i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 19806 8 + 21985 tgttttt-----g i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5822117 8 + 72422247 tttgttt-----g i ponAbe2.chrUn I 157 I 798 s rheMac8.chr7 146194448 3 - 169600520 ----ttt------ i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872027 3 - 171882078 ----ttt------ i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944825 3 + 40200012 ----ttt------ i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390297 3 - 7633303 ----ttt------ i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187543 4 + 58131712 ----tttt----- i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8408385 7 - 10629787 ----ttt-tttt- i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e otoGar3.GL873530 36215503 0 - 36342412 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e manLeu1.NW_012108674v1 2581159 4 - 2620224 I e nomLeu3.chr6 53542048 0 + 121039945 C e panPan2.chr15 55395696 0 - 99763055 C a score=2238.000000 s hg38.chr14_KI270725v1_random 157406 8 + 172810 tttgtttg s panTro5.chr1 126784416 8 + 228573443 tttgtttg i panTro5.chr1 C 0 C 0 s gorGor5.CYUI01005903v1 19814 8 + 21985 tttgtttg i gorGor5.CYUI01005903v1 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822125 798 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e otoGar3.GL873530 36215503 0 - 36342412 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I e colAng1.NW_012121598v1 8408392 0 - 10629787 C e manLeu1.NW_012108674v1 2581159 4 - 2620224 I e chlSab2.chr26 36187547 0 + 58131712 C e cerAty1.NW_012000887v1 4390300 0 - 7633303 C e macNem1.NW_012010577v1 26944828 0 + 40200012 C e macFas5.chr7 147872030 0 - 171882078 C e rheMac8.chr7 146194451 0 - 169600520 C e nomLeu3.chr6 53542048 0 + 121039945 C e panPan2.chr15 55395696 0 - 99763055 C a score=119833.000000 s hg38.chr14_KI270725v1_random 157414 26 + 172810 tt--ttttttgagacagagtgttgctct s panTro5.chr1 126784424 21 + 228573443 -------tttgagacagagtcttgctct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395696 21 - 99763055 -------tttgagacagagtcttgctct i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19822 28 + 21985 tttgttttttgagacagagtcttgctct i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542048 26 + 121039945 --ttttttttgagacagagtcttgctct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194451 26 - 169600520 --ttttttttgagacagagtcttgctct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872030 26 - 171882078 --tttttttttagacagagtcttgctct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944828 26 + 40200012 --ttttttttgagacagagtcttgctct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390300 26 - 7633303 --ttttttttgagacagagtcttgctct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187547 26 + 58131712 --ttttttttgagacagagtcttgctct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581163 26 - 2620224 --ttttttttgagacagagtcttgctct i manLeu1.NW_012108674v1 I 4 C 0 s colAng1.NW_012121598v1 8408392 20 - 10629787 --------ttgagacagagtcttgctct i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822125 798 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10791080 0 + 21366645 C e otoGar3.GL873530 36215503 0 - 36342412 C e aotNan1.NW_018501505v1 6386208 11 - 11604778 I e cebCap1.NW_016107324v1 9306962 11 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=2424563.000000 s hg38.chr14_KI270725v1_random 157440 282 + 172810 gtcacccaggctggagtgcagtgacacaatcttggctcaatacaacctccatctcccgggtttgagtgatttcttgtgcctcagtttcacaagtagctgagactacaggcacatgccaccatgccctgctaatttttgtatttttgtgtttttagtagagaaggggtttcaccatatcggccaggctggccttgaacccctgtcctcaagtgatccacccacctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccTATTATTCT s panTro5.chr1 126784445 282 + 228573443 gtcacccaggctggagtgcagtggcacaatcttggctcaatacaacctccacctcccgggtttgagtgatttcttgtgcttcagttttgcaagtagctgagactacaggcacatgccaccatgcccgactaatttttgtatttttgtgtttttagtagagaaggggtttcaccatattggccagggtggtcttgaacccctgtcctcaagtgatccacccacctcggccttccaaagttctgggattacaggtgtgagccaccatgcctggccTATTATTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395717 282 - 99763055 gtcacccaggctggagtgcagtggcacaatcttggctcactacaacctctgcctcccgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagactacaggcacgtaccaccatgcctggctaattattgtatttttgtatttttagtagagaaggggtttccccatatcggccaggctggccttgaacccctggcctcaagtgatccacccacctcagcctcccaaagtgctggggttacaggtgtgagccaccatgcctggccTATTATTTA i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 19850 280 + 21985 gtcacccaggctggagtgcagtggcacaatcttggctcaatacaacctccacctcccgggtttgagtgatttcttgtgcctcagtttcacaagtagctgagactacaggcacatgccaccatgccc-gctaatttttgtatttttgtgtttttagtagagaaggggtttcaccatatcggccaggctggccttgaacccctgtcctcaagtgatccacccacttc-gcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccTATTATTTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542074 276 + 121039945 atcacccaggctggagtgcagtggtacaatcttggctcactacaacctccgcctcccgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagactacaggcacgtaccaccatgcctggctaatttttgta------tatttttagtagagaaggggtttcaccagatcggccaggctggccttgaacccctggcctcaagtgatctgcccacctcggcctcccaaagtgctggggttacaggtgtgagacaccatgcctggccTATTATTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194477 282 - 169600520 gtcacccagactggagggcagtggcataatcttggctcactacaacctccgcctctcgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagattacaggtgcgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatattggccaggctggccttgaacccctggcctcaagtgatctgcccacctcggcctcccaaagtgctgggattacaggcataagccaccatgcctggccTATTATTTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872056 282 - 171882078 gtcacccagactggagggcagtggcataatcttggctcactacaacctccgcctctcgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagattacaggtgcgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatattggccaggctggccttgaacccctggcctcaagtgatctgcccacctcggcctcccaaagtgctgggattacaggcataagccaccatgcctggccTATTATTTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26944854 282 + 40200012 gtcacccagactggagggcagtggcacaatcttggctcactacaacctctgcctcttgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagattacaggtgcgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatattagccaggctggccttgaacccctggcctcaagtgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcctggccTATTATTTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390326 282 - 7633303 gtcacccagactggagggcagtggcacaatcttggctcactacaacctccgcctctcgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagattacaggtgcgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatattggccaggttggccttgaacccctggcctcaagtgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcttggccTATTATTTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187573 282 + 58131712 gtcacccaggctggagggcagtggcacaatcttagctcactacaacctccgcctcttgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagattacaggcacgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatatcagccaggctggccttgaacccctggcctcaagtgatccgcccacctcggcctcccaaagtgctggcattacaggcatgagccaccatgcctggccTATTATTTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581189 282 - 2620224 gtcacccagactggagggcagtggcacaatcttggctcactacaacctccgcctctcaggtttgagtgatttcttgtgcctcagtttcccaagtagctgagattacaggtgcgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatattggccaggctggccttgaacccctggcctcaagtgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcctggccTATTATTTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408412 282 - 10629787 gtcactcaggctggaaggcagtggcacaatcttggctcactacaacctccgcctctcgggtttgagtgatttcttgtgcctcagtttcccaagtagctgagactacaggcacgtaccaccacgcctggctaatttttgtatttttgtatttttagtagagaaggggtttcaccatatcggccaggctggccttgagcccctggcctcaagtgatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccatgcctggccTATTATTTA i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10791080 282 + 21366645 gtcatccaggctggagtgcagtggtacaatcgtggcttactgcaacctctgcctcctgggttcaagtgatttcttgtgcctgagcttcccaagtagctaggactacagccacacaccaccatgcctggctaatttttgtatttttgtatttttagtggagatgggatttcaccatgttgtccaaactggtcttaaaccccagacctcaagtgatccaccaacttcagcctcccaaagtgctgaaattacaggtgtgagccaccatgcctggccTGTTATTTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9306973 282 + 13033340 gtcatccaggctggagtgcagtggcacaatcgtggcttactgaaacctctgcctcctgggttcaagtgatttcttgtgcctgagcttcccaagtagctaggactacagccacacaccaccatgcctagctaatttttgtatttttgtattttcagtggagatggggtttcaccatgttgtccagactggtcttaaacccctgacctcacgtgatccacccacttcagtctcccaaagtgctgggattacaggcgtaagccaccatgcctggccTGTTATTTA i cebCap1.NW_016107324v1 I 11 C 0 s aotNan1.NW_018501505v1 6386219 282 - 11604778 gtcatccaggctggagtgcagtggcacaatcatggcttactgcaacctctgcctcctgggttcaagtgatttcttgtgcctgagcttcccaagtagctaggactacagccacatacaaccatgcctggctaatttttgtatttttgtatttttattggggatggggtttcaccatgttggccagactggtcttaaacccctgacctcaagtgatccacccacttcagcctcccaaagtgctgggattacaggcatgaaccaccatgcctggccTATTATTTA i aotNan1.NW_018501505v1 I 11 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822125 798 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58113734 3 - 182113224 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36215503 0 - 36342412 C e calJac3.chr10 107991450 1301 - 132174527 I a score=4577835.000000 s hg38.chr14_KI270725v1_random 157722 476 + 172810 AAGGATTTAATCTTCTCCCATCCCAACAGCAATGGAATTTTtcaataaatccaaaaaattatttctttgaaaggacaaacaaattagatg----acaa--aaaag-agagagcctattaaaatataacaagaaaaatggaaaactggataactgaaaa-tttcaaaagaatgtaatatgtaccttttggtcattatatttggaaatatatatgaagaggttaattttttagggaaaatttaactataaaaataaatctagagaaatgagatcatttgaagataccaacaatagaaaaaaatgaaaccggtgtaaagttatagcacctttaaaagctcaaggcccagctg-tgtctcaagcaggccctcttaaacttaatggaaaagttaatt--------------cctgcattcttcaaactattcttttggttaatgggagcaaagga---agcatatctct-ccctccatttatttcttaaaacaactgaaaaccaaaag s panTro5.chr1 126784727 476 + 228573443 AAGGATTTAATCTTCTCCCATCCCAACAGCAATGGAATTTTTCAATAAATCCAAAACATTGTTTCTTTGAAAAGACAAATAAATTAGATG----ACAA--AAAAG-AGAGAGCCTATTaaaatataacaagaaaaatggaaaactggataattgaaaa-tTTCAAAAGAATGCAATATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTAGGGAAAATTTAACTATAAAAATAAATCTAGAGAAATGAGAACAATTGAAGATAACAACAATAGAAAAAAATGAAACCGAAGTAAAGTTATAGCACCTTTAAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATAGGAGCAAAGGA---AGCATATCTCT-CCCTCCATTTATTTCTTAAAACAACTGAAAACCAAAAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55395999 477 - 99763055 AAGGATTTAATCTTCTCCCATCCCAACAGCAATGGAATTTTTCAATAAATCCAAAAAATTGTTTCTTTGAAAAGACAAATAAATTAGATG----ACAA--AAAAG-CAAGAGCATATTAAAATACAACAAGAAAAATGGAAAACCGGATAATTGAAAAGTTTCTAAAGAATGCAGTATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTACGCAAAATTAAACTATAAAAATAAATCTAGGGAAATGAGAACATTTGAAGATACCAACAATAGAAAAAAATGAAACAGGTATAAAGTTATAGGACCTTTAAAAGCTCAAGGTCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATGGGAGCAAAGGA---AGCATATCTCT-CCCTCCGTTTATTTCTTAAAACAACTGAAAACCAAAAG i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20130 475 + 21985 AAGGATTTAATCTTCTCCCATCCCAACAGCAATGGAATTTTTCAATAAATCCAAAAAATT-TTTCTTTGAAAAGACAAACAAATTAGATG----ACAA--AAAAG-AGAGAGCCTATTaaaatataacaagaaaaatggaaaactggataattgaaaa-tTTCAAAAGAATGTAATATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTAGGGAAAATTTAACTATAAAAATAAATCTAGAGAAATGAGAACATTTGAAGATACCAACAATAGAAAAAAATGAAACCGGTGTAAAGTTATAGCACCTTTAAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTGAAACTTAATGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATGGGAGCAAAGGA---AGCATATCTCT-CCCTCCATTTATTTCTTAAAACAACTGAAAACCAAAAG i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542350 477 + 121039945 AAGGATTTAATCTTCTCCCATCCCAACAGCAATGGAATTTATCAATAAATCCAAAAAATTGTTTCTTTGAAAAGACAAATAAATTAGATG----ACAA--AAAAG-CAGGAGCATATTAAAATATGACAAGAAAAATGGAAAACTGGATAATTGAAAACCTTCaaaagaatgcagtatgtaccttttggtcattatatttgaaaatatatatgaagaggttaattttttagggaaaatttaactataaaaataaatctagggaaatgagaacatttgaagataccaacagtagaaaaaaatgaaacaggtataaagttatagcacctttaaaagctcaaggcccagctg-tgtctcaagcaggtcctcttaaacttaatggaaaagttaatt--------------cctgtgttgttcaaactattcttttggttaatgggagcaaagga---agcatatctct-ccctctgtttatttcttaaaacaactgaaaaccaaaag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146194759 472 - 169600520 AAGGATTTAATTTTCTCCCATCCCAACAGCAATGGGATTTTTCAATAAATCCAAAAAATTGTTTCTTTGAAAAGAC----AAATTAGATG----ACAA--AAAAG-AGAGAGCATATTAAAATACAACAAGAAAAATGAAAAACTGGATAATTGAAAATTTTCAAAAGAATGCAATATGTACCTTTCGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTAGGGAAAATTTAACTATAAAAATAAATCTAGGAAAATGAGAACATTTGAAGATACCAACAATAG-AAAAAATGTAACAGGTATAAAGTTGTAGCACCTTTAAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATGGGAGCAAAGGA---AGCATATCTCT-CCCTCTATTTATTTCTTAAAACAACTGAAAACCAAAAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872338 472 - 171882078 AAGGATTTAATTTTCTCCCATCCCAACAGCAATGggatttttcaataaatccaaaaaattgtttctttgaaaagac----aaattagatg----acaa--aaaag-agagagcatattaaaatacaacaagaaaaatgaaaaactggataattgaaaattttcaaaagaatgcaatatgtacctttcggtcattatatttgaaaatatatatgaagaggttaattttttagggaaaatttaactataaaaataaatctaggaaaatgagaacatttgaagataccaacaatag-aaaaaatgtaacaggtataaagttgtagcacctttaaaagctcaaggcccagctg-tgtctcaagcaggtcctcttaaacttaatggaaaagttaatt--------------cctgtgttgttcaaactattcttttggttaatgggagcaaagga---agcatatctct-ccctctatttatttcttaaaacaactgaaaaccaaaag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26945136 472 + 40200012 AAGGATTTAATTTTCTCCCATCCCAACAGCAATGGGATTTTTCAATAAATCCAAAAAATTGTTTCTTTGAAAAGAC----AAATTAGATG----ACAA--AAAAG-AGAGAGCATATTAAAATACAACAAGAAAAATGAAAAACTGGATAATTGAAAATTTTCAAAAGAATGCAATATGTACCTTTCGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTAGGGAAAATTTAACTATAAAAATAAATCTAGGAAAATGAGAACATTTGAAGATACCAACAATAG-AAAAAATGTAACAGGTATAAAGTTGTAGCACCTTTAAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAACGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATGGGAGCAAAGGA---AGCATATCTCT-CCCTCTATTTATTTCTTAAAACAACTGAAAACCAAAAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4390608 472 - 7633303 AAGGATTTAATTTTCTCCCATCCCAACAGCAATGGGATTTTTCAATAAATCCAAAAAATTGTTTCTTTGAAAAGAC----AAATTAGATG----ACAA--AAAAG-AGAGAGCATATTAAAATACAACAAGAAAAATGAAAAACTGGATAATTGAAAATTTTCAAAAGAATGCAGTATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTAAGGAAAATTTAACTATAAAAATAAATCTAGGAAAATGAGAACATTTGAAGATACCAACAATAG-AAAAAATGTAACAGGTATAAAGTTGTAGCACCTTTTAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATGGGAGCAAAGGA---AGCATATCTCT-CCCTCCATTTATTTCTTAAAACAACTGAAAACCAAAAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36187855 477 + 58131712 AAGGATTTACTTTTCTCCCATCCCAACCACAATGGAATTTTtcaataaatccaaaaaattgtttctttgaaaagacaaataaattagatg----acaa--aaaag-agagagcatattaaaatacaacaagaaaaatgaaaaactggataattgaaaattttcaaaagaatgcaatatgtaacttttggtcattatatttgaaaatatatatgaagaggttaatgttttagggaaaatttaactataaaaataaatctaggtaaatgagaacatttgaagataccaacaatagaaaaaaatgtaacaggtataaagttgtagcacctttaaaagctcaaggcccagttg-tgtctcaagcagatcctcttaaacttaatggaaaagttaatt--------------cctgtgttgttcaaactattcttttggttaatgggagcaaagga---agcatatctct-ccctccatttatttcttaaaacaactgaaaaccaaaag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581471 472 - 2620224 AAGGATTTAATTTTCTCCCATCCCAACAGCAATGGGATTTTTCAATAAATCCAAAAAATTGTTTCTTTGAAAAGAC----AAATTAGATG----ACAA--AAAAG-AGAGAGCATATTAAAATACAACAAGAAAAATGAAAAACTGGATAATTGAAAATTTTCAAAAGAATGCAATATGTACCTTTCGGTCATTATATTTGAAAATATATATGAAAAGGTTAATTTTTTAGGGAAAATTTAACTATAAAAATAAATATAGGAAAATGAGAACATTTGAAGATACCAACAATAG-AAAAAATGTAACAGGTATAAAGTTGTAGCACCTTTAAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAAAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTGGTTAATGGGAGCAAAGGA---AGCATATCGCT-CCCTCTATTTATTTCTTAAAACAACTGAAAACCAAAAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8408694 477 - 10629787 AAGGATTTAATTTTCTCCCATCCCAGCAGCAATGGAAGTTTTCAATAAACCCAAAAAATTGTTTCTTTGAAAAGACAAATAAATAAGATG----AGAA--AAAAG-AGAGAGCATattaaaatacaacaagaaaaattaaaaactggataattgaaaattTTCAAAAGAATGCAATATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTTAGGGAAAATTTAACTATAAAAATAAATCTAGGAAAATGAGAACATTTGAAGATACCAAAAATAGAAAAAAATGTAACAGGTATAAAGTTGTAGCACCTTTAAAAGCTCAAGGTCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAAAAGTTAATT--------------CCTGCCTTGTTCAAACTATTCTTTTGGTAAATGGGAGCAAAGGA---AGCATATCTCT-CCCTCCATTTATTTCTTAAAACAACTGAAAACCAAAAG i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10791362 480 + 21366645 AAGGATTTAATATTCTCCTGCCTCAACAGCAATGGAATTTTtcagtaaatccaaaa-attgtttctttaaaaagacaaataaattagattacaaacaa--aaaaatagagagcatattaaaatacaacagaaaaaatgggaaactggataattgaaaattttcaaaagaatgtaatatgtaccttttggtcattatatttgaaaatatatatgaagaggttaatttttcaggaaaaattttactatgaaaataaatctagagaaatgagaacatttgaagataccgacaatag-aaaaagtgaaaaaggtgtaaaggtatatcacctttaaaagctcaaggcccagttg-tgtctcaagcaggttctcttaaacttaatggagaagttaatt--------------cctgtgttgttcaaactattcttttcattaatgagaataaggga---agcatatctct-ccttccatttattttttaaaacaactaaaaaccaaaag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9307255 478 + 13033340 AAGGATTTAATATTCTCCTGTCTCAACAGCAATGGAATTTTTCAGTAAATCCAAAA-ATTGTTTCTTTGAAAAGACAAATAAATTAGATGACAAACAA--AAAAG-AGAGAGCATATTAAAATACAACAG-AAAAATGGGAAACTAGATAATTGAAAATTTTCAGAAGAATGTAATATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTCAGGAAAAATTTTACTATGAAAATAAATCTAGAGAAATGAGAACATTTGAAGATACCAACAATAG-AAAAAGTGAAAAAGGTGTAAAGTTATATCACCTTTAAAAGCTCAAGGCCCAGCTG-TGTCTCAAGCAGGTCCTCTTAAACTTAATGGAGAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTAATTAATGGGAACAAGGGA---AGCATATCTCT-CCTTCCATTTACTTCTTAAAACaactaaaaaccaaaag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6386501 478 - 11604778 AAGGATTTAATCTTCTCCTGTCCCAATAGCAACGGAATTTTTCAGTAAATCCAAAA-ATTGTTTCTTTGAAAAGACAAATAAATTAGATGACAAACAA--ACAAG-AGAGAGCATATTAAAATACAACAG-AAAAATGGGAAACTGGATAATTGAAAATTTTCAAAAGAATGCAATATGTACCTTTTGGTCATTATATTTGAAAATATATATGAAGAGGTTAATTTTTCAGGAAAAATTTTACTATGAAAATAAATCTAGAGAAATGAGAACATTTGAAGATACCAACAATAG-AAAAAGTGAAAAAGGTCTAAAGTTATATCACATTTAAAAGCTCGAGACCCAGCTG-TGTTTCAAACAGGTCCTCTTAAACTTAATGGAGAAGTTAATT--------------CCTGTGTTGTTCAAACTATTCTTTTCACTAATGGGAACAAGGGA---AGCATATATCT-CCTTCCATTTATTTCTTAAAACaactgaaaaccaaaat i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36215503 489 - 36342412 AAGAATTTAATCTTCTCCCACACCAACAGCAATGGAATTTTTCAATAAACCCGGGAAA-GGGTTCTTTGGAAAGACAAATAAATCAAATG----ACAAGCAAAAG-AAAGAATATATTAATATATCACAAGAAAAATGGGAAACTGGATAATTTAAAATTTTC-AAAGAATGCAGTGCATCCATTTTGGTCAACATATTTGAAAATACCTATGGAGGTGTTAATTTCT-AAGGAAAATTTAGTTATAAAAATAAAGTGAGAGAAATGAGAACATTTGACAATATCAAAAATAG-AGGTAATAAAAAAGTTGTAAAGTCATTTCACC-TTGAATGCTTGAGGCCCAGATGATGCCCCAAGTAGGTTTCATCAAAGTTAATGGAAAAGTTAACTTTTTTGTTAAACGGTTTGTGTTGTGCAAACTGTTCTGTCTGTTAATAAGAACAGAGGA---AATGCATCTTTGCCTTTCATTTCTTTCTTAAAACAACT-AAAATCAAAAG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58113737 434 - 182113224 AAGCATTTAACCACTTGCCATTCCAATACCAATAGAAAATTTCAATTAAT-TAAAGGAGGGTTTTTATAAA-------------TAGATT----ACAA--AA----AGCTGGCATTT---ATTGCAATAAGGTAAATACATACTTGGTTAATTTATAAATTTGTAAGGAATACCATCTGTA--TTTTGAACAATATATTTGAGAATCAATATTTA---GTTTTATTTTGAAGGaaatttaaattat-aaaataaataaCGAGAAA-GCTATTATCTGCCTATTCCATCAAAAG-AAAAAAAAAA-------TCAAACCATGTTACTCCTGAATGCTAGAGACCAGATGA-TGTTTCAGGTGGATCCTAGTAAACTCGA-AAAAAAGTTA--T--------------CCCGTGTT-TCTAAGTAGTTTTTCTAGTTAGCAAGAGAAAGGGAGGGGGCCCAACTCTGCCTTTAACTTTATTATTAACATAGTTTTGG-------- i mm10.chr2 I 3 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822125 798 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=11849.000000 s hg38.chr14_KI270725v1_random 158198 1 + 172810 a s panTro5.chr1 126785203 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396476 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20605 1 + 21985 A i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5822923 1 + 72422247 A i ponAbe2.chrUn I 798 I 633 s nomLeu3.chr6 53542827 1 + 121039945 a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195231 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872810 1 - 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26945608 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4391080 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188332 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581943 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409171 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10791842 1 + 21366645 a i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9307733 1 + 13033340 a i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6386979 1 - 11604778 a i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36215992 1 - 36342412 G i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58114171 1 - 182113224 A i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=756900.000000 s hg38.chr14_KI270725v1_random 158199 93 + 172810 aaaatcaat--atacaaaga---aaaaaaaactccaccaattttgttaaaaataaacaccatta------aaaattataaa---------------------ccaaaCTTTGAAGA------------------------------------------------------CTAGT--------------------TGTT s panTro5.chr1 126785204 92 + 228573443 AAAATCAAT--GTACAAAG----AAAAAAAACTCCACCAATTTTGTTAAAAATAAACACCGTTA------AAAAGTATAAA---------------------CCATACTTTGAAGA------------------------------------------------------CTAGT--------------------TGTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396477 90 - 99763055 AAAATCAAT--GTACAAAG------AAAAAACTCCACTAATTTTGTTAAAAGTAAACACCATTA------AAAATTCTAAA---------------------CCAAACTTTGAAGA------------------------------------------------------CTAGT--------------------TGTT i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20606 92 + 21985 AAAATCAAT--GTACAAAG----AAAAAAAACTCCACCAATTTTGTTAAAAATAAACACCATTA------AAAATTATAAA---------------------CCAAACTTTGAAGA------------------------------------------------------CTAGT--------------------TGTT i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542828 91 + 121039945 aaaatcaat--gtacaaag-----aaaaaaactccaccaattttgttaaaaataaacaccatta------aaaattctaaa---------------------ccaaaCTTTGAAGA------------------------------------------------------CTAGT--------------------TTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195232 91 - 169600520 AAAATCAAT--GTACAAAG-----AAAAAAACTCTACCAATTTTGTTAAAAATAAACACCATTA------AAAATTCTAAA---------------------CCAAACTTTGAGGA------------------------------------------------------CTAGT--------------------TGTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872811 91 - 171882078 aaaatcaat--gtacaaag-----aaaaaaactctaccaattttgttaaaaataaacaccatta------aaaattctaaa---------------------ccaaaCTTTGAGGA------------------------------------------------------CTAGT--------------------TGTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26945609 91 + 40200012 AAAATCAAT--GTACAAAG-----AAAAAAACTCTACCAATTTTGTTAAAAATAAACACCATTA------AAAATTCTAAA---------------------CCAAACTTTGAGGA------------------------------------------------------CTAGT--------------------TGTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4391081 91 - 7633303 AAAATCAAT--GTACAAAG-----AAAAAAACTCTACCAATTTTGTTAAAAATAAACACCATTA------AAAATTCTAAA---------------------CCAAACTTTGAGGA------------------------------------------------------CTAGT--------------------TGTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188333 91 + 58131712 aaaatcaat--gtacaaag-----aaaagaactctaccaattttgttgaaaataaacaccatta------aaaattctaaa---------------------ccaaattttgagca------------------------------------------------------CTAGT--------------------TGTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2581944 91 - 2620224 AAAATCAAT--GTACAAAG-----AAAAAAACTCTACCAATTTTGTTAAAAATAAACACCATTA------AAAATTCTAAA---------------------CCAAACTTTGAGGA------------------------------------------------------CTAGT--------------------TGTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409172 89 - 10629787 AAAATCAAT--GTACAAAG-----AAAAAAA--CTACCAATTTTGTTAAAAATAAACACCATTA------AAAATTCTAAA---------------------CCAGACTTTGAGGA------------------------------------------------------CTAGT--------------------TGTT i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10791843 90 + 21366645 aaactaaat--gtacaaat-----aaaaatattc-accaattttgttaaaaataaacacaatga------aaaactctaaa---------------------ccaaaCTTTGATGA------------------------------------------------------CTAGT--------------------TGTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9307734 90 + 13033340 aaactaaat--gtacaaat-----aaaaataTTC-ACCAATTTTGTTAAAAATAAACACAATTA------AAAACTCTAAA---------------------CCAAACTTTGATGA------------------------------------------------------CTAGT--------------------TGTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6386980 90 - 11604778 aaactaaat--gtacaaat-----aaaaACATTC-ACCAATTTTGTTAAAAATAAACACAATTA------AAAACTCTAAA---------------------CCAAACTTTGAAGA------------------------------------------------------TTAGT--------------------TGTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36215993 197 - 36342412 GAAATAAGT--GGAAAAACAAACAAAAAAAATCCCACCAATTTTATTAAATATAAACACCATGGACCACTAGAACTCTAAAGGACTATATCCTTGAAAGAACCCATCCTTTATGAACACATCCTTTAATCTATTACTTTAGGATAATCACTTTCTTCCAGGTAGCGTTTTCCAGTCACCTTCCATGAGTTACTCATACT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58114172 92 - 182113224 AAAACAGGTAAGTGAGAAA-----GGGAAAATTCCAACAATTTAGCTAAAGGTAACCAAC-CTG------AAAATTGTAAA---------------------CCAGACTCTGAAGA------------------------------------------------------ACTGT--------------------TCTG i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822924 633 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066001 460 + 2868945 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=1700496.000000 s hg38.chr14_KI270725v1_random 158292 177 + 172810 AGTGTCATTACAATTTAGCCTTTCTTCAAAAAATGATGAGAGTAGTTGCAGGCACCTGAGCAAATATGGCATATTAAACACATAGAGAGACTTATTTTCCCACCTGAAACTATAACA--TGATGACAAATGGCTTATTCAAGTGATATAA----AAagaaaacagcaacatttttgaaaacag s panTro5.chr1 126785296 177 + 228573443 AGTGCCATAACAATTTTGCCTTTATTCAAAAAATGGTGAGAGTAGATGCAGACACCTGAGCAAATATGGCATATTAAACACATAGAGATACTTATTTTCCCATCTGAAACTATAACA--TGAAGGCAAATGGCTTATTCAAGTGATATAA----AAagaaaacagcaacatttttgaaaatag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396567 177 - 99763055 AGTGCCATAACAATTTAACTTCTCTTCAAAATGCGGTGAGAGTAGATGCAGACACCTGAGCAAATATGGCATGTGAAACACATACAGAGACTTATTTTCCCACCTGAAACTGTAACA--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAGgaaaacagcaacatttttgaaaatag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20698 175 + 21985 AGTGCCATTACAATTTAGCCTTTCTTCAAAAAATGGTGAGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATAGAGAGACTTATTTTCCCACCTGAAACTATAACA--TGATG-CAAATGGCTTATTCAAGTGATATAA----AAagaaaacagcaaca-ttttgaaaatag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53542919 177 + 121039945 AGTGCCATAACAATTTAGCCTCTCTTCAAAACATGGTGAGAGTAGATGCAGATCCCTGAGCAAATATGGCATGTGAAACATATACAGAGACTTATTTTCCCACCTGAAACTATAACA--TGATGGCAAATGGTTTATTGAAGTGATATAA----AAagaaaacggcaacatttttgaaaatag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195323 176 - 169600520 CGTGCCATAACAAGTTAACCTTTCTTCAAAAAATGGTGGGAGTAGATGCAGACACTTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTTCCCA-CTCAACCTATAACA--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAATAAaacagcaacatttttgaaaatag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147872902 176 - 171882078 CGTGCCATAACAAGTTAACCTTTCTTCAAAAAATGGTGGGAGTAGATGCAGACACTTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTTCCCA-CTCAACCTATAACA--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAATAAaacagcaacatttttgaaaatag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26945700 176 + 40200012 CGTGCCATAACAAGTTAACCTTTCTTCAAAAAATGGTGGGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTTCCCA-CTCAACCTATAACA--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAATAAaacagcaacatttttgaaaatag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4391172 176 - 7633303 CGTGCCATAACAAGTTAACCTCTCTTCAAAAAATGGTGGGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATGTAGAGACTTATTTTCCCA-CTCAACCTATAACA--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAATAAaacagcaagatttttgaaaacag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188424 175 + 58131712 AGTGCCATAACAAGTTAACCTCTCTTCAAAAAATGGTGAGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTTCCCA-CTCAAACTATAACG--TGATGGCAAATGGC-TATTGAAGTGATAAAA----AAATAAaacagcaacatttttgaaaatag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582035 176 - 2620224 CGTGCCATAACAAGTTAACCTCTCTTCAAAAAATGGTGGGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTTCCCA-CTCAACCTATAACG--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAATAAaacagcaacatttttgaaaatag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409261 177 - 10629787 AGTGCCATAACAATTTAACCTCTCTTCAAAAAATGATGAGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATATAGAGAATTATTTTCACACCTCAAACTATAGCA--TGATGGCAAATGGCTTGTTGAAGTGATATAA----AAACAAaacagcaacatttttgaaaatag i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10791933 177 + 21366645 AGTGCCATGACAATGTAGTCTGTCTTCAAAAAGTGGCAAGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTGTCCACCTGAAGCTATAACA--TGATGGCGAATGGCTTATTGAAGTGATATAA----AAagaaaacagcaacatttttgaagctag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9307824 177 + 13033340 AGTGCCATGACAATGTAGTCTCTCTTCAAAAAGTGGCAAGAGTAGATGCAGACACCTGAGCAAATATGGCATGTTAAACACATATAGAGACTTATTTTTCCACCTGAAGCTATAACA--TGATGTCAAATGGCTTATTGAAGAGATATAA----AAagaaaacagcaacatttttgaagctag i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6387070 177 - 11604778 AGTGCCATGACAATGTAGTCTCTCTTCAAAAAGTGGCAAGAGTAGATGCAGACACCTGAGAAAATATGGCATGTTAAATACATATAGAGACTTATTTTTCCACCTGAAGTTATAACA--TGATGGCAAATGGCTTATTGAAGTGATATAA----AAagaaaacagcaacatttttgaagctag i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36216190 173 - 36342412 AGAACTATGACAATTTATCCTCTCTTCGAAAAATGGCAAGAGTAGAAGCAGCCAATTGCACaaaaacagcatattgaacacatgtaga----tattttgctttctgaaactgcaatg--tgatggcaaatggattattaaaaaaatataa----agagaaaacagcaacatttttaaagatag i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58114264 162 - 182113224 AGAATCAC-ACAGTTGAGCTTCTCTTCAGAAAG-AGCAAGAGTAGGCATGAACACATGAGTATGTGTGATGTACTGCACCTC-----AGAACTTTGTGCCCTCTTGAAACTATAAAA--GGGTGATAAGAAGTATAAT-AACTCATATAG----GGG------AGTCACTTTTTTAAATA-AA i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1066461 175 + 2868945 AGTACCATGACTATGTAGCTTGAAGTTCAAAAATGGAAAGAATAGATGCAGGCATCTGAGTAAATATGTCATAGTAAA-------ATAGGCTT-TCTTCCTACCTGAAGCTCTAAAAATTGATGGTATATGGCTTACTAAGATGGCATAAACCTAAAGGAAACAGCAATGTTTTTGAAGGTAG i dasNov3.JH579377 I 460 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822924 633 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=531800.000000 s hg38.chr14_KI270725v1_random 158469 58 + 172810 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgtaaaattgtaagt s panTro5.chr1 126785473 58 + 228573443 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgtaagt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396744 58 - 99763055 gaagtccatgaatggctggtaactgacttagcttacc--aaaaagtacaaaattgtaagc i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20873 58 + 21985 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgtaagt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53543096 58 + 121039945 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgtaagt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195499 58 - 169600520 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgcaagt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147873078 58 - 171882078 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgcaagt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26945876 58 + 40200012 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgcaagt i macNem1.NW_012010577v1 C 0 I 314 s cerAty1.NW_012000887v1 4391348 58 - 7633303 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgcaagt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188599 58 + 58131712 gaagtccataaatggctggtaactgacttagcttacc--aaaaagtgcaaaattgcaagt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582211 58 - 2620224 gaagtccataaatggctggtatctgacttagcttacc--aaaaagtgcaaaattgcaagt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409438 60 - 10629787 gaagtccataaatggctggtaacggacttagcttaccaaaaaaagtgcaaaattgcgagt i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792110 58 + 21366645 gaagtttgtatatggctggtaactgacttagctgacc--aaaaagtgcaaaattataagc i saiBol1.JH378136 C 0 I 4 s cebCap1.NW_016107324v1 9308001 58 + 13033340 gaagtttgtagatggtgggtaactgacttagctgaaa--aaaatttgcaaaattctaagc i cebCap1.NW_016107324v1 C 0 I 4 s aotNan1.NW_018501505v1 6387247 58 - 11604778 gaagtttgtagatggctggtaactgacttagctgacc--aaaaagtgcaaaattctaagc i aotNan1.NW_018501505v1 C 0 I 4 s otoGar3.GL873530 36216363 58 - 36342412 gatgtttataaatgagtgagtactgacttagttgata--aacgagaacaaaattgttagc i otoGar3.GL873530 C 0 I 4 s mm10.chr2 58114426 43 - 182113224 GAGTTACATGGATGACTGATAACTTATTTACCTGCTG--AATGAG--------------- i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822924 633 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=14045.000000 s hg38.chr14_KI270725v1_random 158527 2 + 172810 ag s panTro5.chr1 126785531 2 + 228573443 ag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396802 2 - 99763055 ag i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20931 2 + 21985 ag i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53543154 2 + 121039945 ag i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195557 2 - 169600520 gg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147873136 2 - 171882078 gg i macFas5.chr7 C 0 I 309 s cerAty1.NW_012000887v1 4391406 2 - 7633303 gg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188657 2 + 58131712 gg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582269 2 - 2620224 gg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409498 2 - 10629787 ag i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792172 2 + 21366645 ag i saiBol1.JH378136 I 4 C 0 s cebCap1.NW_016107324v1 9308063 2 + 13033340 ag i cebCap1.NW_016107324v1 I 4 C 0 s aotNan1.NW_018501505v1 6387309 2 - 11604778 ag i aotNan1.NW_018501505v1 I 4 C 0 s otoGar3.GL873530 36216425 2 - 36342412 ag i otoGar3.GL873530 I 4 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822924 633 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58114469 0 - 182113224 C e dasNov3.JH579377 1066636 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e macNem1.NW_012010577v1 26945934 314 + 40200012 I a score=6856.000000 s hg38.chr14_KI270725v1_random 158529 2 + 172810 cg s panTro5.chr1 126785533 2 + 228573443 ag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396804 2 - 99763055 cg i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20933 2 + 21985 cg i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53543156 2 + 121039945 cg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195559 2 - 169600520 ca i rheMac8.chr7 C 0 I 309 s macFas5.chr7 147873447 2 - 171882078 ca i macFas5.chr7 I 309 C 0 s cerAty1.NW_012000887v1 4391408 2 - 7633303 ca i cerAty1.NW_012000887v1 C 0 I 300 s chlSab2.chr26 36188659 2 + 58131712 cg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582271 2 - 2620224 ca i manLeu1.NW_012108674v1 C 0 I 309 s colAng1.NW_012121598v1 8409500 2 - 10629787 cg i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792174 2 + 21366645 tg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9308065 2 + 13033340 tg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6387311 2 - 11604778 tg i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36216427 2 - 36342412 tg i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822924 633 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58114469 0 - 182113224 C e dasNov3.JH579377 1066636 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I e macNem1.NW_012010577v1 26945934 314 + 40200012 I a score=2782083.000000 s hg38.chr14_KI270725v1_random 158531 307 + 172810 gggaaatctgattctacaaaatgttcataaattggttgcacgggatacctctg------aaagtagaagtaaaggtagggctaaaacccaggaagattggttgaaagactgtttC-CAATGTCCACTCCATCAAGCCGCATGAATGCCTCTAGGTTCTGCTGGTGGAAAAGTAGACATTTGCTGTCT---AGAGAGGTAACA--AGGAATCTTAGTACTGGCAATATCATCTTCAATGGTCATACATAAATTA-GGGGTGCAAAACGAACAG-TAACtactgaaagct-agatctccccaattttcacctctatctagattc s panTro5.chr1 126785535 307 + 228573443 gggaaatctgattctacaaaatgttcataaataggttgcatgggatacctctg------aaagtagaagtaaaggtagggctaaaacccaggaagattgattgaaagactgtttc-caatgcccactccatcaagcctcatgaatgcctctaggttctgctggtggaaaagtagatatttgctgtct---ggagaggtaaca--gggaatcttagtactggcaatatcatcttcaatggtcatacataaatta-ggggggcaaaatgaacag-taactactgaaagct-agatctccccaattttcacctctatctatattc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55396806 307 - 99763055 gggaaatctgattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtagaagtaaaggtagggctaaaacccaggaagactggttggaagactgttCC-CAATGCCCACTCCATCAAGCCTCGTGAATGCCTCTAGGTTCTGCTGGTGGAAAAGTAGAAATTTGCCGTCT---AGAGAGGTACCA--GGGAATGTTAGTACTGGCAATATCATCTTCATTGGTCATACATAAATTA-GGGGGCCAAAATGAACAG-TAACTACTGAAAGCT-AGATCTCCCCAATTTTCACCTCTATCTAGATTC i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 20935 304 + 21985 gggaaatctgattctacaaaatgttcataaattgcttgcac-ggatacctctg------aaagtagaagtaaaggtagggctaaaacccaggaagattggttgaaagactgtttC-CAATGCCCACTCCATCAAGCCTCATGAATGCCTCTAGGTTCTGCTGGTGGAAAAGTAGACATTTGCTGTCT---AGAGAGGTAACA---GGAATCTTAGTACTGGCAATATCATCTTCAATGGTcatacataaatta-ggggg-caaaatgaacag-taactactgaaagct-agatctccccaattttcacctctatctagattc i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53543158 304 + 121039945 gggaaatctgattctgcaaaatgttcatacattggttgcacgggatacctctg------aaagtagaagtaaaggtagggctaaaacccagaaagattggttggaagactgtttC-CAATGCCCACTC---CAAGTCTCGTGAATGCCTCTAGATTCTGCTGGTGGAAAAGTAGACATTTGCCATCT---AGAGAGGTAACA--GGGAATCTTAGTACTGGCAACATCATCTTCATTGGTcatacataaatta-ggggggcaaaatgaacag-taactactgaaagct-agatctccccaattttcacttctatctagattc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146195870 308 - 169600520 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtacaagtaaaggtagggctaaaacccaggaagatttattggaagactgtttc-cagtgcccactccatcaagccttgtgaaaggctctaggttctgctggtggaaaagtacacatttaccatct---agagaggtaacacagggaatcttagtactggcaatctcatcttcattgg-catatgtaaatta-gggggccaaaatgaacag-taattactgaaaggt-agatctccccaattttcacctctatctagattt i rheMac8.chr7 I 309 C 0 s macFas5.chr7 147873449 308 - 171882078 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtacaagtaaaggtagggctaaaacccaggaagatttattggaagactgtttc-cagtgcccactccatcaagccttgtgaaaggctctaggttctgctggtggaaaagtacacatttaccatct---agagaggtaacacagggaatcttagtactggcaatctcatcttcattgg-catatgtaaatta-gggggccaaaatgaacag-taattactgaaaggt-agatctccccaattttcacctctatctagattt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26946248 308 + 40200012 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtacaagtaaaggtagggctaaaacccaggaagattgattggaagactgtttC-CAGTGCCCACTCCATCAAGCCTTGTGAAAGGCTCTAGGTTCTGCTGGTGGAAAAGTACACATTTACCATCT---AGAGAGGTAACACAGGGAATCTTAGTACTGGCAATCTCATCTTCATTGG-CATATGTaaatta-gggggccaaaatgaacag-taattactgaaaggt-agatctccccaattttcacctctatctagattt i macNem1.NW_012010577v1 I 314 C 0 s cerAty1.NW_012000887v1 4391710 308 - 7633303 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtacaagtagaggtagggctaaaacccaggaagattgattggaagactgtttc-cagtgcccactccatcaagccttgtgaaaggctctaggttctgctggtggaaaagtacacatttaccatct---agagaggtaacacagggaatcttagtactggcaatctcatcttcattgg-catatgtaaatta-gggggccaaaatgaacag-taattactgaaaggt-agatctccccaattttcacctctatctagattt i cerAty1.NW_012000887v1 I 300 C 0 s chlSab2.chr26 36188661 308 + 58131712 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtacaagtaaaggtagggctaaaacccaggaaaattgattggaagactgtttC-CAGTGCCCACTCCATCAAGCCTTGTGAAAGGCTCTAGGTTCTGCTGGTGGAAAAGTACACATTTACCATCT---AGAGAGGTCACATAGGGAATCTTAGTACTGGCAATATCATCTTCATTGG-CATATGTAAATTA-CGGGGCCAAAATGAACAG-TAACtactgaaggct-agatctccccaattttaacctctatctagattc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582582 308 - 2620224 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtacaagtaaaggtagggctaaaacccaggaagattgattggaagactgtttC-CAGTGCCCACTCCATCAAGCCTTGTGAAAGGCTCTAGGTTCTGCTGGTGGAAAAGTACACATTTACCATCT---AGAGAGGTAATACAGGGAATCTTAGTACTGGCAATCTCATCTTCATTGG-CATATGTaaatta-gggggccaaaatgaacag-taattactgaaaggt-agatctccccaattttcacctctatctagattt i manLeu1.NW_012108674v1 I 309 C 0 s colAng1.NW_012121598v1 8409502 309 - 10629787 gggaaatcttattctgcaaaatgttcataaattggttgcacgggatacctctg------aaagtagaagtaaaggtagggctaaaacccaggaagactgattggaagactgtttc-cagtgcccactccatcaaaccttgtgaaaggctctaggttctgctggtggaaaagtagacatttaccatct---agagaggtaacatagggaatcttcatactggcaatgtcatcttcattgg-catatgtaaattaggggggccaaaatgaacag-taactactgaaagct-agatctccccaattttcacttctatctagattc i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792176 315 + 21366645 gggaaatctgattctgtaaaaggttcataaattggttgcacaggatacctctgaaagtaaaagtaaaagtaaaagtagaactaaaacccaggaaaactaattggaagattgtttG-CAATGCCCACTCCATCAAGCCTCGTGAATGCCTCTAGGTTCTGCCAGTAGAAAAGTAGACATTTACCGTCT---AGAGGGACAACATAGGGAATCTCAGTACTGACAATGCCATCATCATTGGTCATACATAAATTA-GGGGGCCAAAACAAACAG-TAACTACTGAAAGCT-AGATCTCCCCAATTTTCACCTCTATCTTGATTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9308067 309 + 13033340 gggaaatctgattctgcgaaaggttcataaattggtttcacaggatacctctg------aaagtaaaagtaaaagtaggactaaaacccaggaaaaccggttggaagattgtttg-caatgcccactccatcaagcctcgtgaatgcctctaggttctgccagtagaaaagtagacatttaccgtct---agagagacgacatagggaatctcagtactgacaatgtcatcatcattggtcatacataaatta-gggagccaaaacaaacag-taactaccgaaagct-agatctccccaattttcacctctatcttgattc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6387313 309 - 11604778 gggaaatctgattcggtgaaaggttcatagattggttgcacaggatacctctg------aaagtaaaagtaaaagtaggactaaaacccaggaaaactggttggaagattgtttG-CAATGCCCACTCCATCAAGCCTCGTAAATGCCTCTTGGTTCTGCCAGTAGAAAAGTAGACATTTACCGTCT---AGAGAGATAACATAGGGAATCTCGGTACTGATAATGTCATCATCATTGGTCATACATAAATTA-GGGGGCCAAAACAAACAG-TAACTACTGAAAGCT-AGATCTCCCCAATTTTCACCTCTATCTTGATTC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36216429 309 - 36342412 gggatttatgattccataaaacgtccatgaattggttgcacaggatactactg------aagctagaggtaaaagtagggtcgaaggccaggaagattcattagaagtcttttca-caatgcatacttcattaagcctcgtgaatgcctctagatcttactagcagaaaagtagagatttatcctct---tgagaggtaaaataggggatctcagtatcagatatattatc-tcattggttttacataaaata-ggcaaccaaaacagaggg-taactactgaatgctaagatttccccattcttcatccttcttttacccc i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58114469 250 - 182113224 -----------------AGAACAGTTCTTATCTGGCAGTAAGG----------------AAAG-GGAAGGGAGGGGAGGGCTATGGCAGAGGAA----------AGGACTGTGGCACAAGCCTCATTTTCAGCAGTGCTAGCACTGCCTCTGGGTCCTA-TGGCCAAGAAGTAG--ATTTGCTTTCTTACAGAGAAGTAAAACACAATTCCTCAGAACAAGCAATATCAACTTAACTGGTAATGAATCCAAAA-GAGGTTAAAAGCAAACAGCCAATGCCTGAAGGCTAAGACCTCCC------------------------ i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5822924 633 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=10424.000000 s hg38.chr14_KI270725v1_random 158838 1 + 172810 a s panTro5.chr1 126785842 1 + 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397113 1 - 99763055 A i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21239 1 + 21985 a i gorGor5.CYUI01005903v1 C 0 C 0 s ponAbe2.chrUn 5823557 1 + 72422247 a i ponAbe2.chrUn I 633 I 731 s nomLeu3.chr6 53543462 1 + 121039945 a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196178 1 - 169600520 a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147873757 1 - 171882078 a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26946556 1 + 40200012 a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392018 1 - 7633303 a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188969 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582890 1 - 2620224 a i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409811 1 - 10629787 a i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792491 1 + 21366645 G i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9308376 1 + 13033340 a i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6387622 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36216738 1 - 36342412 a i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58114719 0 - 182113224 C e dasNov3.JH579377 1066636 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=3081165.000000 s hg38.chr14_KI270725v1_random 158839 351 + 172810 aaacataacagtctattagtcttatatcctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccagtggatatgtcatgaggagcttttctgggaaaacttctcgacctgattgccctgtctggaagccacagttgacaattattacctaagaacctgaagcttaccgtaaacatttattgtattgctcttgaacgcaaacagataacaaacaatcatgagattctaggtacagccaataacaaacac-----agaaac-aaaaaata-aacaaaac-----aactgaaagtaaacagagtctatgca-g---------tgtgggaaaaaag----------taattattaatttcctca s panTro5.chr1 126785843 347 + 228573443 aaacataa----ctattagtcttatatcctcag---agaagactggaagactctacttggaagatcatgatcagctgaaaggaatagaccagtggatatgtcatgaggagcttttctgggaaaacttcttgacctgattgccctgtctggaagccacagttgacaattattacctaagaacctgaagcttaccataaatgtttattgtattgctcttgaacacaaacagataaccaactatcacgagattctaggtacagccaataacaaacac-----agaaac-aaaaaata-aacaaaac-----atctgaaagtaaacagagtctataca-a---------tgtgggaaaaaag----------taattattaatttcctca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397114 351 - 99763055 AAACATAACAGTCTATTAGTCTTATATCCTCAG---AGAAGACTGGAAGACTCTAGTTGGAAGATCATGATCAGCCCAAAGGAATAGACCAATGGATATGCCATGAGGGGCTTTTCTGGGAAAACTTCTCGACCTGATTGCCCTGTCTGGAAGCCAGAGTTGAGAATTATTACCTAAGAACCTGAAGCTTACCGTAAACGTTTATTGTATTGCtcttgaacacaaacaggtaaccaacaatcacgagattctaggtacatccaataacaaacac-----agaaac-aaaaaata-aaccaaac-----aactggaagtaaacagagtctataca-g---------tgtaggaaaaatg----------taattattaatttcctca i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21240 348 + 21985 aaacataacagtctattagtcttatatcctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccagtggatatgtcatgaggggcttttctgggaaaacttctcgacctgattgccctgtctggaagccacagttgacaattattacctaagaacctgaagcttaccgtaaacgtttattgtattgctcttgaacacaaacagataacaaagaatcacgagattctaggtacagccaataacaaacac-----agaaac--aaatata-aacaaaac-----aactgaaagtaaacagagtctataca-g---------tgtgggaaaaa-g----------taattattaa-ttcctca i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53543463 349 + 121039945 aaacataacagtctgttagtcttatatcctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatatgtcatgaagggcttttcggggaaaacttcttgacctgattgccctgtctggaagccacagttgagaattagtacctaagaacctgaagcttaccgtaaacgtttattgtattgctcttgaacacaaacagacaaccaataatcacgagattctaggtacagccaataacaaacac-----agaaacaaaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaa-------------aattattaatttcctca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196179 351 - 169600520 aaacctaactgtctattagtcttatattctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatatgtcatgagaggcttttctgggaaaacttctcaacctgattgccctgtcttgaagccacagttgagaattattacctaagaacctgaagcttaccgtaaacgtttattatattgctgtggaacacaaatagataacaaacgatcacgagattctaggtacagtcaacaacaaacac-----agaaac-aaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaag----------taattattaatttcctca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147873758 351 - 171882078 aaacctaactgtctattagtcttatattctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatatgtcatgagaggcttttctgggaaaacttctcaacctgattgccctgtcttgaagccacagttgagaattattacctaagaacctgaagcttaccgtaaacgtttattatattgctgtggaacacaaatagataacaaacgatcacgagattctaggtacagtcaacaacaaacac-----agaaac-aaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaag----------taattattaatttcctca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26946557 351 + 40200012 aaacctaactgtctattagtcttatattctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatatgtcatgagaggcttttctgggaaaacttctcaacctgattgccctgtcttgaagccacagttgagaattattacctaagaacctgaagcttaccgtaaacgtttattatattgctcttgaacacaaatagataacaaacgatcacgagattctaggtacagtcaacaacaaacac-----agaaac-aaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaag----------taattattaatttcctca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392019 351 - 7633303 aaacctaacagtctattagtcttatattctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatatgtcatgagaggcttttctgggaaaacttctcaacctgattgccctgtcttgaagccacagttgagaattattacctaagaacctgaagtttaccgtaaacatttattgtattgctcttgaacacaaatagataacaaacgatcacgagattctaggtacagtcaacaacaaacac-----agaaac-aaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaag----------taattattaatttcctca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36188970 351 + 58131712 aaacataacagtctattagtcttatattctcag---agaagactggaagactctagttggaagatcatgaacagcccaaaggaatagaccaatggatatgtcatgagaggcttttctgggaaaaattctcaacctgattgccctgtcttgaagccacagttgagaattattacctaagaacctgaagcttaccgtaaacgtttattgtattgctcttgaacacaaacagataaccaatgatcacaagattctaggtacagccaacaacaaacac-----agaaac-aaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaag----------taattattaatttcctca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2582891 351 - 2620224 aaacctaacagtctattagtcttatattctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatatgtcatgagaggcttttctgggaaaacttctcaatctgattgccctgtcttgaagccacagttgagaattattacctaagaacctgaagtttaccataaacatttattgtattgctcttgaacacaaatagataacaaacgatcacgagattctaggtacagtcaacaacaaacac-----agaaac-aaaaaata-aacaaaac-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaaa----------taattattaatttcctca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8409812 351 - 10629787 aaacataacagtgtattagtcatatattctcag---agaagactggaagactctagttggaagatcatgatcagcccaaaggaatagaccaatggatgtgtcatgagaggcttttctgggaaaacttctcaacctgattgccctgtcttgaagccacagttgaggattattacctaagaacctgaagcttactgtaaacgtttattatattgctcttgaacacaaacagataaccaacaatcacgagattctaggtacagccaacaacaaacac-----agaaac-aaaaaata-aacaaaat-----aactggaagtaaacagagtctataca-g---------tgtgggaaaaaag----------taattattaatttcctca i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792492 350 + 21366645 AAACATAA--CTCTATTagtcttatatccacagagaagaagactggaagactttactttgaagttcatgatcaacccaaaggaatagactaatggatatgtcatgagtagcttttctggggaaacttctcgacctgattgccccgtcttgaagcc--agttgagaattattacctaagaacctaaagcttaccataaacatttattgtattgctcttgaacacagacagataacgaataatcacaagattctaggtacagccagtaacaaacac-----agaaaa-aaaaaata-aacaaaac-----agctggaagtaaacagagtctataca-g---------tatgggaaaaaag----------taattattaatttcctca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9308377 334 + 13033340 aaacataa--gtctattagtcttatatccacagagaagaagactggaaaactttactttgaaattcatgatcaacccaaagtaatagactaatggatatgtcatgagtagcttttctggggaaacttcttgacctgattgccctgtcttgaagcc--agttgagaattattacctaagaaccagaagcttaccataaacatttattgtattgctcttgaaaacagacag-------------acaagattctcgatacagccaataacaaacac-----cgaaaa-aaaaaac----caaaac-----agttggaagtaaacagagtctataca-g---------tatgggaaaaaag----------tacttattaatttcctca i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6387623 350 - 11604778 AAACATAA--GTCTATTagtcttatatccacagagaagaagactggaagactttactttgaagttcatgatcaacccaaaggaatggactaatggatatgtcatgagtagcttttcgggggaaacttctcgacctgattgccctgtcttgaagct--agttgagaattattacctaagaacctgaagcttaccataaacatttattgtattgctcttgaacacagacagataacgaataatcacaagattctaggtacagccaataacaaacac-----agaaaa-gaaaaata-aacaaaac-----agttggaagtaaacagagtctataca-g---------tatgggaaaaaag----------taattattaatttcctca i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36216739 341 - 36342412 aagtataacagtctgttaattctatatggtcatggaaggtgactggaaaactctacctagaagaaaatgattttcctaaagtagtggattaaaggatgtgtcatgaagggttctttcaaggatatagtccgtccagattacccttttggaaaggcacagatgagaattactacct--ttacttggaacttattataggcatttattgctctgcccttcaacataaacagataaccaacaaccatgagaatctgagcatagccagtaagaaacac-------aaac-aaaaa------taaaac-----aattggaagttagtagtatttatacatg---------tct---ataaaag----------ttgttgt--attttgtca i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58114719 271 - 182113224 ----------------TGGTCTTCTCTCTCCAA------------------TCAGGTTGGAGGAAAGTGTCCTGT-------------------GGTATGTTATA---------TATGTGGTGACT----------------------------CACACTGGACAATGGTT-CTTGATGATATAAAGTTCA--------------TGTA-TGCTCCTGTGTACAAAGAGATAAAAGA-----ACAAGAATGTAGACAGGGTTTTTAAGATACATTGGGGAAAATT-AAGAAACAGAACAAAACTGTCTATGTGGAAATGGAAATG--CTATGTA-GCTATTTTTTTTTgagagaaaggaggaggaggatagtgatggagggaggca i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5823558 731 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e canFam3.chr30 26804904 4140 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=3190162.000000 s hg38.chr14_KI270725v1_random 159190 348 + 172810 gagagggaagataagat------aata--------caacaagaacaaggtgtgat--ataaaatggatattcaaaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatatataacttaatgggagat-ttggaaggtaaagctgactgcaactgc-agaaaagttagtgtaaac---agagttgggaatgagaa-agggaaagtttaatgaattaaataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaagtaaaatgaagtatgatatatgta-----------------------------------------------aatac-ttttttgaaatgggtaagagttaaagtgcatgaa-tttcagattgaatgtatccacgagaatt s panTro5.chr1 126786190 347 + 228573443 gagagggaagataagat------aata--------caacaagaacaaagtgtgat--ataaaatggatattcaaaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatatataacttaatgagagat-ttggaaggtaaagctgactgcatctcc-agaaaagttagtgtaaac---agagttgggaatgagaa-agggaaagtttaatgaattaaataattggtcctatagggccagcaac-aaaatac--------aggcatatgggaaaag-aaaaaa-tacaatgaagtataatatatgta-----------------------------------------------aataa-ctttttgaaatgggtaagagttaaagtgtatgaa-tttcagattgaatgtgtccaccagaatt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397465 348 - 99763055 gagagggaagataagat------aata--------caacaagaacaaggtgtgataaaaaaaatggatattc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataacttggtgggagat-ttggaaggtaaagctgacggcatcccctggaaaagttagtgtaaac----gagttgggaatgagga-aggggcagtttaatgaattaaataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaa-tacaatgaagtatgatatatata-----------------------------------------------aatga-ttttttgaaatgggtaagagttaaagtgtatgaa-tttcagattgaatgtgtccaccagaatt i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21588 346 + 21985 gagagggaagataagat------aat---------caacaagaacaaggtgtgat--ataaaatggatattcaaaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatatataacttaatgggagat-ttggaaggtaaagctgactgcatctcc-agaaaagttagtgtaaac---agagttgggaatgagaa-agggaaagtttaatgaattaaataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaa-tacaatgaagtatgatatatgta-----------------------------------------------aataa-ttttttgaaatgggtaagagttaaagtgtatgaa-tttcagattgaatgtgtccaccagaatt i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53543812 344 + 121039945 gagagag-----aagat------aata--------caataagaacacggtgtgac--ataaaacggatattcaaaaa-----aataga----attcttaaaaattaagaaatttattacagaaatgtataacttaatgggagat-ttggaaggtaaagctgactgcatctcctggaaaagttagcgtaaac---agagttgggaatgagaa-agggacagtttaatgaattaaataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaaatacaatgaagtatgatatatata-----------------------------------------------aataa-ttttttgaaatgggtaagagttaaagtgtatgaa-tttcaggttgaatgtgtccaccagaatt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196530 344 - 169600520 gagaggg-----aagat------aata--------caccaagaacaaggtgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctggaaggtaaagctgattgcatctcctggagaagttagtgtaaac---agagttgggagtgagaa-agggaaagtttaacgaactacataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaaatacaatgaagtatgatatatata-----------------------------------------------aataatttttttgaaatgggtaagagttcaagtgtatgaa-tttcaaattgaatgtgtccaccagaatt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874109 344 - 171882078 gagaggg-----aagat------aata--------caccaagaacaaggtgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctggaaggtaaagctgattgcatctcctggagaagttagtgtaaac---agagttgggagtgagaa-agggaaagtttaacgaactacataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaaatacaatgaagtatgatatatata-----------------------------------------------aataatttttttgaaatgggtaagagttcaagtgtatgaa-tttcagattgaatgtgtccaccagaatt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26946908 344 + 40200012 gagaggg-----aagat------aata--------caccaagaacaaggtgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctggaaggtaaagctgattgcatctcctggagaagttagtgtaaac---agagttgggagtgagaa-agggaaagtttaatgaactacataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaaatacaatgaagtatgatatatata-----------------------------------------------aataatttttttgaaatgggtaagagttcaagtgtatgaa-tttcagattgagtgtgtccaccagaatt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392370 342 - 7633303 gagaggg-----aagat------aata--------caccaagaacaagatgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctagaaggtaaagctgactgcatctcctggagaagttagtgtaaac---agagttgggaatgggaa-agggaaag-ttaatgaactaaataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaaatacaatgaagtataatatatata-----------------------------------------------aataa-ttttttgaaatgggtaagagttcaagtgtatgaa-tttcagattgaatgtgttcaccagaatt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189321 344 + 58131712 gagaggg-----aagat------aata--------caccaagaacaaggtgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctggaaggtaaagctgactgcatctcctggagaagttagtgcaaac---agagttgggaatgagaa-agggaaagtttaatgaactaaataattggtcctatagggccagcaac-gaaatac--------aggcatttgggaaaagaaaaaaaatacaatgaagtatgatatatata-----------------------------------------------aataa-ttttttgaaatgggtaagagttcaagtgtatgaa-tttcagattgaatgtgtccaccagaatt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583242 343 - 2620224 gagaggg-----aagat------aata--------caccaagaacaagatgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctaaaaggtaaagctgattgcatctcctggagaagttagtgtaaac---agagttgggaatgagaa-agggaaagtttaatgaactaaataattggtcctatagggccagcaac-aaaatac--------aggcatttgggaaaag-aaaaaaatacaatgaagtatcatatatata-----------------------------------------------aataa-ttttttgaaatgggtaagagttcaagtgtatgaa-tttcagattgaatgtgtccaccagaatt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410163 343 - 10629787 gagaggg-----aagat------aata--------tgccaagaacaaggtgtgat--ataaaatggatatcc-aaaa-----aataga----attcttaaaaattaagaaatttattgcagaaatgtataagttaatgggagat-ctggaaggtaaagctgactgcatctcctggagaagttagtgtaaac---agagttgggaatgagaa-agggaaagtttaatgaactaaataattggtcctatagggccagcaac-aaaatac--------aggcatttggggaaag-aaaaaaatacaatgaagtatgatatatata-----------------------------------------------aataa-ttttttgaaatgggtaagagttcaagtgtatgaa-tttcagattgaatgtgtccagcagaatt i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10792842 338 + 21366645 gagaggg-----aagat------aaca--------caacaaaaacaaggtgtgat--ataaaatggatattcaaaaa-----accaga----attctt-aaaattgagaaatttattgcagaaatgtataagttaatgggagac-ttgtaaggtaaagctgTCTGCAACTCTAAGAAAAGTTAGTGTAAATAAAAGAGTTGGGAATGAGAA-AGGGAAAATTTAATGAATTAAATAATTGGTTCTATAGGGCTAGCAAC-AATATAC--------ACACATTTGGGGAA---AAAAAAATACAATGAAGGATGATATACATG-----------------------------------------------AGTAA-TTTTTTGAAATGGGTAA------AAGTGCATGAA-TTTCAGATTGAATGTGTCCACCAGAATT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9308711 327 + 13033340 gagaggg-----aagat-------------------aacaagaacaaggtgtgat--ataaaatggatattcaaaaa----caccaga----attctt-aaaattaagaaatttattgcagaaatgtataacttaatgggagactttgtaaggtaaagctgactgcaactcctagaaaagttagtgtaaataaaagagttgggaatgagaa-agggaaaatTT----AATTAAATAATTGGTCCTATAGGGCTAGCAAC-AATATAC--------ACACATTTGGG-------AAAAAATACGATGAAGGATAATATACATA-----------------------------------------------AATAA-TTTTTTGAAATGGGTAA------AAGTGCATGAA-TTTCAGATTGAATGTGTCCACCAGAGTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6387973 336 - 11604778 gagaggg-----aagat------gata--------caacaagaacaaggtgtgat--ataaaatggatattcaaaaa----aactaga----attctt-aaaattaagaaatttattgcagaaatgtataacttaataggagac-ttgtaaggtaaagctgactgcaactcctagaaaagttagtgtaaataaaagagttgggaatgagaa-agggaaaatttaatgaattaaataatcagtccTATAGGGCTAGCAAC-AATATAC--------ACACATTTGGG------AAAAAAATGCAATGAAGGATGATATACATA-----------------------------------------------AATAA-TTTTTTGAAATGGGTAA------AAATGCATGAA-TTTCAGATTGAATGTGTCCACCAGAATT i aotNan1.NW_018501505v1 C 0 I 2732 s otoGar3.GL873530 36217080 323 - 36342412 gagactt-----aagat------aata-----------caagaacaaggtatgac--ataaaatgtatattc-aaaa-----caaagaaagcattcttga--------aaatttattgtaacaa-------------ggtagat-ttggaagataaagttgattacatattttagaaaagtaaataaaaac--aacagttggaaattaggagaggaaaagtttagtgaagtaaaggatcagtccaatagggccagcaat-aatatat--------aggctttaaaaaaagg-gaaaaaatacaatggagaatagtatatat-------------------------------------------------gtaa-attttcaaaataggtaaaagttaaaatacatgac-tttaagatcaaatgcattcatcagaatt i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58114990 382 - 182113224 gagaagg-agagaagaaaggagaaaga--------gaATAGGAATAAGGTGTGTT--AGAGAGTAAATATG--AAAA-----CATTAT----AGTAGAAGAAACTAA-AATTTTGTTG-AAAAGTGTTTAAT------AGTCAT-TATGAAGACAAAGCTGGCTGCATCTCTTGAAAAAGTAATTGGACAT--AAGA----GAAAGTAGAG-CAGAGAAACGGAATGAGTTAAA-GACCAGTCCT-TAGCACCCACTGT-GACACAT--------AGACATTTAAG---AG-AGACCAGTAAAGTGAGGGACAGCatatatatatatatatatatatatatatatatatatatatatatatatatataGAATGA-TTTTTTTAAAT-GGTAAGGAAACAAAAACAGAAA-TTTCAAATAATGTACTTCTATCAGAGGC i mm10.chr2 C 0 C 0 s canFam3.chr30 26809044 365 - 40214260 gaaataa-----aaggt------aatacactcatgcaataagaataagatatgag--at--aatgaattaac-aaaagatttaataga----attcttaataattaaaaattttattgtaaaaatatataacttaccagttgat-tttgaagataaagttgactgtatatcctggaaaattgagtaaataa--gatactttgaaattggga-aagaaaagtttagtgaaataaaatatcagtccaatgggaccaacagctaaaatatagagtgaaagagatctctaatgac-agaacagtacactggagtgtgatatacata-----------------------------------------------aataa-ttttttaaaaggggtgagaactaaagttcatgagttttcaaattgaatgtattcaccacggtt i canFam3.chr30 I 4140 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5823558 731 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=30989.000000 s hg38.chr14_KI270725v1_random 159538 3 + 172810 caa s panTro5.chr1 126786537 3 + 228573443 caa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397813 3 - 99763055 caa i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21934 3 + 21985 caa i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53544156 3 + 121039945 caa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196874 3 - 169600520 caa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874453 3 - 171882078 caa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947252 3 + 40200012 caa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392712 3 - 7633303 caa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189665 3 + 58131712 caa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583585 3 - 2620224 caa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410506 3 - 10629787 caa i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10793180 3 + 21366645 TAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309038 3 + 13033340 TAA i cebCap1.NW_016107324v1 C 0 I 48 s otoGar3.GL873530 36217403 3 - 36342412 caa i otoGar3.GL873530 C 0 I 1 s mm10.chr2 58115372 3 - 182113224 CAT i mm10.chr2 C 0 C 0 s canFam3.chr30 26809409 3 - 40214260 caa i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5823558 731 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=105187.000000 s hg38.chr14_KI270725v1_random 159541 15 + 172810 gccagtgg-tgaaaat s panTro5.chr1 126786540 15 + 228573443 gccagtgg-tgaaaat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397816 15 - 99763055 gccagtgg-tgaaaat i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21937 15 + 21985 gccagagg-tgaaaat i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53544159 15 + 121039945 accagtgg-tgaaaat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196877 15 - 169600520 gccagtgg-tgaaaat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874456 15 - 171882078 gccagtgg-tgaaaat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947255 15 + 40200012 tccagtgg-tgaaaat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392715 15 - 7633303 gccagtgg-tgaaaat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189668 15 + 58131712 gccagtag-tgaaaat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583588 15 - 2620224 gccagtgg-tgaaaat i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410509 15 - 10629787 gccagtgg-tgaaaat i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10793183 5 + 21366645 -----------AAAAC i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 36217407 15 - 36342412 tccaggag-tgaaaat i otoGar3.GL873530 I 1 C 0 s mm10.chr2 58115375 15 - 182113224 GTCTGTAG-ATAAAAT i mm10.chr2 C 0 I 24 s canFam3.chr30 26809412 16 - 40214260 cctagtagatgaaaat i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5823558 731 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=26195.000000 s hg38.chr14_KI270725v1_random 159556 3 + 172810 aga s panTro5.chr1 126786555 3 + 228573443 aga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397831 3 - 99763055 aga i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21952 3 + 21985 aga i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53544174 3 + 121039945 aga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196892 3 - 169600520 aga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874471 3 - 171882078 aga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947270 3 + 40200012 aga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392730 3 - 7633303 aaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189683 3 + 58131712 aga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583603 3 - 2620224 aga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410524 3 - 10629787 aga i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10793188 3 + 21366645 AAA i saiBol1.JH378136 C 0 I 13 s otoGar3.GL873530 36217422 3 - 36342412 aga i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809428 3 - 40214260 aga i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5823558 731 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115390 24 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=73972.000000 s hg38.chr14_KI270725v1_random 159559 15 + 172810 cctagaccaacgca----c s panTro5.chr1 126786558 15 + 228573443 cctagaccaacaca----c i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397834 15 - 99763055 cctagaccaacaca----c i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21955 15 + 21985 cctagaccaacaca----c i gorGor5.CYUI01005903v1 C 0 C 0 s nomLeu3.chr6 53544177 15 + 121039945 cctagaccaacaca----c i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196895 15 - 169600520 tctatactaacata----c i rheMac8.chr7 C 0 I 28 s macFas5.chr7 147874474 15 - 171882078 tctatactaacata----c i macFas5.chr7 C 0 I 28 s macNem1.NW_012010577v1 26947273 15 + 40200012 tctatactaacata----c i macNem1.NW_012010577v1 C 0 I 12 s cerAty1.NW_012000887v1 4392733 15 - 7633303 cctatactaacata----c i cerAty1.NW_012000887v1 C 0 I 20 s chlSab2.chr26 36189686 19 + 58131712 cctatactaaCATACCCGC i chlSab2.chr26 C 0 I 28 s manLeu1.NW_012108674v1 2583606 15 - 2620224 cctatactaacata----c i manLeu1.NW_012108674v1 C 0 I 20 s colAng1.NW_012121598v1 8410527 15 - 10629787 cctatagtaacata----c i colAng1.NW_012121598v1 C 0 I 14 s otoGar3.GL873530 36217425 14 - 36342412 cctataccaacata----- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809431 13 - 40214260 cctataccaacat------ i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5823558 731 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115390 24 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10793191 13 + 21366645 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=53889.000000 s hg38.chr14_KI270725v1_random 159574 15 + 172810 --acacacacacacac----------a s panTro5.chr1 126786573 25 + 228573443 --acacacacacacacacacacagcaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397849 23 - 99763055 --acacacacacacacacacacac--a i panPan2.chr15 C 0 C 0 s gorGor5.CYUI01005903v1 21970 15 + 21985 --aCACACACACACACA---------- i gorGor5.CYUI01005903v1 C 0 N 0 s ponAbe2.chrUn 5824289 15 + 72422247 --acacacacacacata---------- i ponAbe2.chrUn I 731 C 0 s nomLeu3.chr6 53544192 15 + 121039945 --acacacacacacaca---------- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196938 15 - 169600520 --acacacacacacaca---------- i rheMac8.chr7 I 28 C 0 s macFas5.chr7 147874517 15 - 171882078 --acacacacacacaca---------- i macFas5.chr7 I 28 C 0 s macNem1.NW_012010577v1 26947300 15 + 40200012 --gcacacacacacaca---------- i macNem1.NW_012010577v1 I 12 C 0 s cerAty1.NW_012000887v1 4392768 15 - 7633303 --gcgcacacacacaca---------- i cerAty1.NW_012000887v1 I 20 C 0 s chlSab2.chr26 36189733 15 + 58131712 --gcgcgcacacacaca---------- i chlSab2.chr26 I 28 C 0 s manLeu1.NW_012108674v1 2583641 15 - 2620224 --gcacccacacacgca---------- i manLeu1.NW_012108674v1 I 20 C 0 s colAng1.NW_012121598v1 8410556 15 - 10629787 --acacacacacacaca---------- i colAng1.NW_012121598v1 I 14 C 0 s otoGar3.GL873530 36217439 15 - 36342412 --aaactaaaaaaaata---------- i otoGar3.GL873530 C 0 I 4 s canFam3.chr30 26809444 15 - 40214260 caagaaaaataatga------------ i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115390 24 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10793191 13 + 21366645 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=19988.000000 s hg38.chr14_KI270725v1_random 159589 5 + 172810 cacac- s panTro5.chr1 126786598 5 + 228573443 cacac- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397872 5 - 99763055 cacac- i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5824304 5 + 72422247 cacac- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr6 53544207 5 + 121039945 cacac- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146196953 5 - 169600520 cacac- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874532 5 - 171882078 cacac- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947315 5 + 40200012 cacac- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392783 5 - 7633303 cacac- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189748 5 + 58131712 cacac- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583656 5 - 2620224 cacac- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410571 5 - 10629787 cacac- i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36217458 1 - 36342412 c----- i otoGar3.GL873530 I 4 C 0 s canFam3.chr30 26809459 5 - 40214260 -agaaa i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115390 24 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10793191 13 + 21366645 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=13025.000000 s hg38.chr14_KI270725v1_random 159594 2 + 172810 ac s panTro5.chr1 126786603 2 + 228573443 aT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397877 2 - 99763055 aa i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5824309 2 + 72422247 ac i ponAbe2.chrUn C 0 I 79 s nomLeu3.chr6 53544212 2 + 121039945 ac i nomLeu3.chr6 C 0 I 6 s rheMac8.chr7 146196958 2 - 169600520 ac i rheMac8.chr7 C 0 I 22 s macFas5.chr7 147874537 2 - 171882078 ac i macFas5.chr7 C 0 I 22 s macNem1.NW_012010577v1 26947320 2 + 40200012 ac i macNem1.NW_012010577v1 C 0 I 22 s cerAty1.NW_012000887v1 4392788 2 - 7633303 ac i cerAty1.NW_012000887v1 C 0 I 22 s chlSab2.chr26 36189753 2 + 58131712 ac i chlSab2.chr26 C 0 I 22 s manLeu1.NW_012108674v1 2583661 2 - 2620224 ac i manLeu1.NW_012108674v1 C 0 I 22 s colAng1.NW_012121598v1 8410576 2 - 10629787 ac i colAng1.NW_012121598v1 C 0 I 22 s saiBol1.JH378136 10793204 2 + 21366645 AT i saiBol1.JH378136 I 13 C 0 s otoGar3.GL873530 36217459 2 - 36342412 at i otoGar3.GL873530 C 0 I 9 s mm10.chr2 58115414 2 - 182113224 AT i mm10.chr2 I 24 C 0 s canFam3.chr30 26809464 2 - 40214260 at i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=60511.000000 s hg38.chr14_KI270725v1_random 159596 22 + 172810 cagcacactc------------------------aggaaaaaaaaa s panTro5.chr1 126786605 27 + 228573443 CAGCACACTCCGCCT-------------------AAAAAAAAAAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397879 46 - 99763055 caaaataccaagaccaacaacccctagggaaaaaaagaaaaaaaag i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544220 27 + 121039945 cagcacacTCCGGGa-------------------aaaaaaaaaaaa i nomLeu3.chr6 I 6 I 2 s rheMac8.chr7 146196982 24 - 169600520 cagcacactccgg---------------------aaaaactaaaa- i rheMac8.chr7 I 22 C 0 s macFas5.chr7 147874561 24 - 171882078 cagcacactctgg---------------------aaaaactaaaa- i macFas5.chr7 I 22 C 0 s macNem1.NW_012010577v1 26947344 24 + 40200012 cagcacactctgg---------------------aaaaactaaaa- i macNem1.NW_012010577v1 I 22 C 0 s cerAty1.NW_012000887v1 4392812 24 - 7633303 cagcacactctgg---------------------aaaaactaaaa- i cerAty1.NW_012000887v1 I 22 C 0 s chlSab2.chr26 36189777 24 + 58131712 CAGCACACTCCGG---------------------AAAAAATTAAA- i chlSab2.chr26 I 22 C 0 s manLeu1.NW_012108674v1 2583685 24 - 2620224 cagcacactccgg---------------------aaaaactaaaa- i manLeu1.NW_012108674v1 I 22 C 0 s colAng1.NW_012121598v1 8410600 24 - 10629787 caacacactccgg---------------------aaaaaataaaa- i colAng1.NW_012121598v1 I 22 C 0 s saiBol1.JH378136 10793206 24 + 21366645 CAGCACACTCTCA---------------------GGGAGGGGAAA- i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 36217470 14 - 36342412 cagtacact-------------------------gagaa------- i otoGar3.GL873530 I 9 C 0 s mm10.chr2 58115416 21 - 182113224 CAGCATACTC------------------------AGGAAATAAAA- i mm10.chr2 C 0 C 0 s canFam3.chr30 26809466 16 - 40214260 cagcacactgaga---------------------taa--------- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824311 79 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=15947.000000 s hg38.chr14_KI270725v1_random 159618 2 + 172810 aa s panTro5.chr1 126786632 2 + 228573443 AA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397925 2 - 99763055 ga i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5824390 2 + 72422247 aa i ponAbe2.chrUn I 79 I 476 s nomLeu3.chr6 53544249 2 + 121039945 aa i nomLeu3.chr6 I 2 C 0 s rheMac8.chr7 146197006 2 - 169600520 aa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874585 2 - 171882078 aa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947368 2 + 40200012 aa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392836 2 - 7633303 aa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189801 2 + 58131712 AA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583709 2 - 2620224 aa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410624 2 - 10629787 aa i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10793230 2 + 21366645 GA i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 36217484 2 - 36342412 aa i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809482 2 - 40214260 aa i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115437 0 - 182113224 C e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=27991.000000 s hg38.chr14_KI270725v1_random 159620 7 + 172810 gaagaga s panTro5.chr1 126786634 7 + 228573443 GAAGACA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397927 7 - 99763055 aagaaaa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544251 7 + 121039945 gaaGTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197008 7 - 169600520 gaagata i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874587 7 - 171882078 gaagata i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947370 7 + 40200012 gaagata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392838 7 - 7633303 gaagata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189803 7 + 58131712 GAAGATA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583711 7 - 2620224 gaagata i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410626 7 - 10629787 gaagatg i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10793232 4 + 21366645 -AAAA-- i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 36217486 7 - 36342412 aaagata i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809484 7 - 40214260 caggata i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824392 476 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115437 0 - 182113224 C e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e cebCap1.NW_016107324v1 9309041 48 + 13033340 I e calJac3.chr10 107991450 1301 - 132174527 I a score=317088.000000 s hg38.chr14_KI270725v1_random 159627 46 + 172810 cttaaaatttccag-aga-agagaa--atataaatggtcactagaaaaca s panTro5.chr1 126786641 46 + 228573443 CTTCAAATTTTCAGCAGACAGAGAA--ATA-AAATGGTCACTAG-AAGCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397934 46 - 99763055 cttcaaatttccag-aga-agagaa--ataaaaatggtcactagaagaca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544258 46 + 121039945 CTTCAAATTTCCAG-AGA-AGAGAA--ATAAAAATGGTCActagaagaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197015 46 - 169600520 cttcaaacttccag-aga-ggagaa--ataaaaatcctcactggaagata i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874594 46 - 171882078 cttcaaacttccag-aga-ggagaa--ataaaaatcctcactggaagata i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947377 46 + 40200012 cttcaaacttccag-aga-ggagaa--ataaaaatcctcactggaagata i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4392845 46 - 7633303 cttcaaacttccag-aga-ggagaa--ataaaaatcctcactggaagata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36189810 46 + 58131712 CTTCAAACTTCCAG-AGA-GGAGAA--ATAAAACTTCTCActggaagata i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583718 46 - 2620224 cttcaaacttccaa-aga-ggagaa--ataaaaatcctcactggaagata i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410633 46 - 10629787 cttcaaacttccag-aga-ggagaa--ataaaaatcctcactggaagata i colAng1.NW_012121598v1 C 0 C 0 s saiBol1.JH378136 10793236 46 + 21366645 CCTCAAAGTTCTAG-AGA-GGAGAA--ATAAAAATGGTCActagaagaca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309089 46 + 13033340 CCTCTAAGTTCTAG-AGA-GGGGAA--ATAAAAGTGGTCActagaagaca i cebCap1.NW_016107324v1 I 48 C 0 s otoGar3.GL873530 36217493 45 - 36342412 tttcaaatttccag-aga-ggaaaa--ata-aaattgtccctaaaacaga i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58115437 41 - 182113224 -TTCAAATTTCCAG-AGT-GGAAAA--ATGG----GGTCACTAAGAGACA i mm10.chr2 C 0 I 4299 s canFam3.chr30 26809491 48 - 40214260 attctagctttctg-aga-ggaaaagcaCAAAATAGGTCATtagaagata i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824392 476 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=151505.000000 s hg38.chr14_KI270725v1_random 159673 25 + 172810 ----agcaaagccttataaattgcaaaac s panTro5.chr1 126786687 24 + 228573443 ----AGCAAAG-CTTATAAATTGCAAAAC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55397980 25 - 99763055 ----agcaaagccttataaattgcaaaac i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544304 25 + 121039945 ----agcaaagccttataaattgcaaaac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197061 25 - 169600520 ----aataaagccttatacattgcaaaac i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147874640 25 - 171882078 ----aataaagccttatacattgcaaaac i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 26947423 25 + 40200012 ----aataaagccttatacattgcaaaac i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 4392891 25 - 7633303 ----aataaagccttatacattgcaaaac i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 36189856 25 + 58131712 ----aacaaagccttataaattgcaaaac i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 2583764 25 - 2620224 ----aataaagccttatacattgcaaaac i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 8410679 25 - 10629787 ----aacaaagccttataaattgcaaaac i colAng1.NW_012121598v1 C 0 I 1 s saiBol1.JH378136 10793282 25 + 21366645 ----agcaaagccttataaattgcaaaag i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 9309135 25 + 13033340 ----agcaaagccttataaatttcaaaag i cebCap1.NW_016107324v1 C 0 I 1 s otoGar3.GL873530 36217538 10 - 36342412 ----agaaa---------------gagac i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809539 29 - 40214260 ggatatctacatcttataaattgtaagaa i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824392 476 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6388309 2732 - 11604778 I e calJac3.chr10 107991450 1301 - 132174527 I a score=1070240.000000 s hg38.chr14_KI270725v1_random 159698 143 + 172810 aaattatttctaat-gcagaatag-tatc-tccaaccaaac--taaatcagataggaggaaacaataataa-gcattta-cagcat--------ggc-aagattctaaaactctacatccaatacatcctatctcaggaattt-ctggagaagagtttca s panTro5.chr1 126786711 149 + 228573443 aaattatttctaatggcagaatag-tatcttccaaccaaactgtaaatcagatagcgaggaacaataataaggcatttagcagcat--------ggcgaagat--taaaactctaccgtccatacatcctatctcaggaattcactggagaagagtttca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398005 146 - 99763055 aaattatttctaat-gcagaatag-tatg-cccaaccaaactataaatcagataggaggaaacaataataa-gcattta-cagcat--------ggc-aagattctaaaactctacatccaatacatcctatctcaggaatttactggagaagagtttca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544329 146 + 121039945 aaattatttctaat-gcagaatgg-tatg-cccaaccaaactataaatcagataggaggaatcaataataa-gcattta-cagcat--------ggc-aagattctaaaactctacattcaatacaccctatctcaggaatttactggagaagagtttca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197087 139 - 169600520 aaattatttctaat--------ag-tatg-cgcaaccaaactagaaatcagataggtggaaacaatcataa-gcattta-caacat--------tgc-aagattctaaaactctacagccaatacatcctatctcaggaaattattggagaagagtttca i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147874666 139 - 171882078 aaattatttctaat--------ag-tatg-cgcaaccaaactagaaatcagataggtggaaacaatcataa-gcattta-caacat--------tgc-aagattctaaaactctacagccaatacatcctatctcaggaaattattggagaagagtttca i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 26947449 139 + 40200012 aaattatttctaat--------ag-tatg-tgcaaccaaactagaaatcagataggaggaaacaatcataa-gcattta-caacat--------tgc-aagattctaaaactctacagccaatacatcctatctcaggaaattattggagaagagtttca i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 4392917 139 - 7633303 aaattatttctaat--------ag-tatg-cgcaaccaaactagaaatcagataggaggaaacaatcataa-gcattta-caacat--------tgc-aagattctaaaactctacagccaatacatcctatctcaggaaattattggagaagagtttca i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 36189882 132 + 58131712 aaattatttctgat--------ag-tatg-cccaaccaaactagaaatcagataggaggaaacactcataa-gcattga-caacat--------tgc-aagattctaaaactctacagccaa-------tatctcaggaaattattggagaagagtttca i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 2583790 139 - 2620224 aaattatttctaat--------ag-tatg-cgcaaccaaactagaaatcagataggaggaaacaatcataa-gcattta-caacat--------tgc-aagattctaaaactctacagccaatacatcctatctcaggaaattattggagaagagtttca i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 8410705 139 - 10629787 aaattatttctaat--------ag-tatg-cccaaccaaactagaaatcagataggaggaaacaatcataa-gcattta-caacat--------tgc-aagattctaaaactctacagccaatacatcctatctcaggaaattattggagaagagtttca i colAng1.NW_012121598v1 I 1 C 0 s saiBol1.JH378136 10793308 145 + 21366645 aaattatttataat-gcagaatag-tatg-tccaacctagctatgaatcagataggagaaaacaataataa-gcattta-ca-cat--------tgc-aagattctaaaactctacatccaatacatcctatctcaggatgctaatggataagagtttca i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 9309161 146 + 13033340 aaattatttatgat-gcagaatag-tatg-tccaacctagctatgaatcagataggagaaaacaataataa-gcattta-tagcat--------tgc-aagattctaaaactctgtatccaatacatcctatctcaggaagttaatggataagagtttca i cebCap1.NW_016107324v1 I 1 C 0 s aotNan1.NW_018501505v1 6391041 146 - 11604778 aaattatttctaat-gcagaatag-tatg-tccaacctagctatgaatcagataggagaaaatgataataa-gcattta-cagcat--------tgc-aagattctaaaactctacatccaatacatcctatctcaggaagttaatggataagagtttca i aotNan1.NW_018501505v1 I 2732 C 0 s otoGar3.GL873530 36217548 151 - 36342412 -atttatttccaat-gtagaataa-tata-tacactcaacttatcaatcagatatgagaaaataatga-aa-atgtttt-caatatattcaatacgt-gaagttttaaaactatactgccagtacattgtatctcaggaagttgctggagaata-ttcca i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809568 144 - 40214260 aaattattttcaat-gtagaatagttatg-tctagtgaaactataagtca-ataagaggtattaataaaaa-gcattt--taatat---------gc-aagtttccaaaacaatacttccaatgcatactatctcagaaagttactggaagaatgttaca i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824392 476 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e calJac3.chr10 107991450 1301 - 132174527 I a score=18495.000000 s hg38.chr14_KI270725v1_random 159841 2 + 172810 tt s panTro5.chr1 126786860 2 + 228573443 ct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398151 2 - 99763055 ct i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544475 2 + 121039945 ct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197226 2 - 169600520 ct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874805 2 - 171882078 ct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947588 2 + 40200012 ct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393056 2 - 7633303 ct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190014 2 + 58131712 tt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583929 2 - 2620224 ct i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410844 2 - 10629787 ct i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107992751 2 - 132174527 tc i calJac3.chr10 I 1301 C 0 s saiBol1.JH378136 10793453 2 + 21366645 ct i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309307 2 + 13033340 ct i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391187 2 - 11604778 ct i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36217699 2 - 36342412 ct i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809712 2 - 40214260 ct i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824392 476 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1066636 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=2310780.000000 s hg38.chr14_KI270725v1_random 159843 246 + 172810 gaaatgaggaagtaaatga-agaaagagtagggtataaagtacagggaatctcctgat-tattagatgtacagtatgtgtacacagcaacctgtgtaaattagagttatttag--aaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcatta-gaaaactggagtagagtttgga--gttggtactttgatacatacatagaaaaatgaaaaaaacaaaaa s panTro5.chr1 126786862 246 + 228573443 aaaatgagtaagtaactga-agaaagagtagggtataaagtacagggaatctactggt-tgttagatgtacagtatgtgtacacagcaacctgtgtaaattagagctatctag--aaaaaaaat--------------ttctaaaa-gataagtctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcatta-gaaaactggggtagagtttgga--gttggtactttgatacatacatagaaaaacgaacaaaacaaaaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398153 244 - 99763055 aaaatgaggaagtaaatga-ggaaagagta-ggtataaagtacagggaatctcttggt-tgttagatgtatggtatgtgtacacagaaacctgtgtaaattagaggtatctag--aaaaaaaa---------------ttcaaaaa-gataaatctgat-aaaatgtttaatgcttctgaatgcat-----------tatgag-------------actcatta-gaaaactggggtagagtttgga--gttggtactttgatatgtacatagaaaaccaaacaaaacaaaaa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544477 246 + 121039945 aaaatgaggaagtaaatga-ggaaagagtagggtataaagtacagggaatctcctggt-tgttagatgtatggtatgtgtacacagcaacctgtgtaaattagagctatctag--aaaacaaat--------------ttcaaaaa-gataaatctgat-aaaatagctaatgcttctgaatgcat-----------tatgag-------------actcatta-gaaaactggggtagaatttgga--gttggtactttgatacgtacatagaaaaccaaacaaaacaaaaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197228 247 - 169600520 aaaatgaggaagtaaatgagggaaagagtaggttataaagtacagggaatttcctggt-tgttagatgtacagtatgtgtacgcagcaacctgtgtaaattggagctatctag--aaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcacta-gaaaactggggtagagtttgga--gttggtactttgatacgtacacagaaaactaaacaaaacaaaaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147874807 247 - 171882078 aaaatgaggaagtaaatgagggaaagagtaggttataaagtacagggaatttcctggt-tgttagatgtacagtatgtgtacgcagcaacctgtgtaaattggagctatctag--aaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcacta-gaaaactggggtagagtttgga--gttggtactttgatacgtacacagaaaactaaacaaaacaaaaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947590 247 + 40200012 aaaatgaggaagtaaatgagggaaagagtaggttataaagtacagggaatttcctggt-tgttagatgtacagtatgtgtacgcagcaacctgtgtaaattggagctatctag--aaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcacta-gaaaactggggtagagtttgga--gttggtactttgatacgtacacggaaaactaaacaaaacaaaaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393058 246 - 7633303 aaaatgaggaagtaaatga-ggaaagagtatgttataaagtacagggaatttcctggt-ggttagatgtacagtatgtgtatgcagcaacctgtgtaaattggagctatctag--aaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcacta-gaaaactagggtagactttgga--gttggtactttgatacgtacacggaaaactaaacaaaacaaata i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190016 247 + 58131712 aaaatgaggaagtaaatga-gaacagagtaggttataaagtacagggaatttcctggt-cgttagatgtacagtatgtgtacacagcaacctgtgtaaattggagctatctag-aaaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatccat-----------tatgag-------------actcacta-gaaaactggggtagagtctgga--gttggtactttgatacctacacagaaaactaaacaaaacaaaaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2583931 246 - 2620224 aaaatgaggaagtaaatga-ggaaagagtagattataaagtacagggaatttcctggt-tgttagatgtacagtatgtgtatgcagcaacctgtgtaaattggagctatctag--aaaaaaatt--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcacta-gaaaactggggtagagtttgga--gttggtactttgatacgtacacggaaaactaaacaaaacaaaaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8410846 248 - 10629787 aaaatgaggaagtaaatga-ggaaagagtaggttataaagtacagggaatttcctggt-tgttagatgtacagtatgtgtacacagcaacctgtgtaaattggagctatctagaaaaaaaaaat--------------ttcaaaaa-gataaatctgat-aaaatgtctaatgcttctgaatgcat-----------tatgag-------------actcacta-gaaaactggggtagagtttgga--gttggtactttgatatgtacatagaaaaccaaacaaaacaaaaa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107992753 242 - 132174527 aaaaaaaaaaaaaaaaaaa-aaaaagagtaggggataaagtacagggaatctcctggt-tgttagatgtatagtatgtgtacacagcaacccatgtaaattagaactgtctag--aaaaaaaat--------------tttcaaaa-gataaatctgat-aaaatgtctaaggcttttgaatgcat-----------tatgag-------------actcatta-ggaaactggggtggagtttgga--gtttgtattttgatatatatgtagaaaac----caaaacaaaaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793455 242 + 21366645 aaaaaaaggaagtaaatga-agaaagagtaggggataaagtacagggaatctcctggt-tgttagatgtatagtatgtgtacacagcaacccatgtaaattagaactgtctag--aaaaaaatt--------------tttcaaaa-gataaatctgat-aaaatgtctaaggcttctgaatgcat-----------tatgag-------------actcatta-ggaaactggggtagagtttgga--gttggtattttgatatatacgtagaaaac----cgaaacaaaAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309309 243 + 13033340 aaaataagggagtaaatga-ggaaagagtaggggataaagtacagggaatcccctggt-tgttagatgtatagtatgtgtacacagcaacccatgtaaatgagaactgcctag--aaaaaaatt--------------tttcaaaa-gataaatctgataaaaatgtctaaggcttctgaatgcat-----------tatgag-------------actcatta-ggaaactgggggagagtctgga--gttggtattttgatatatacgtagaaaac----caaaataaaaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391189 239 - 11604778 aaaataaggaagtaaatga-ggaaagagtaggggataaagtacagggaaTCTCCTGGT-TTTTAGATGTATAGTATGTGTACACAGCAATCCATGTAAATTAGAACTGtctag---aaaaaact--------------tttcaaaa-gataaatctgat-aaaatgtctaaggcttctgaatgcat-----------tatgag-------------actcatta-ggaaactggggtagagtttg----gttggtattttgatatatacatagaaaac----caaaacaaaaa i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36217701 213 - 36342412 aaaatgaaggagtagaggg-ggaaagagaaaggcatACAGTACAGAGACTCTCcaggt-ggttag-------------------------------------gaactggctag--aaaaaagttt------------cttcaaaaa-gataaagctgat-aaaatacctaatga-tctcagtttat-----------tgtagg-------------actcattatgacaactgggatagagtttagagggttttcttttcaatacagatacagaaaaccaaataagagaacaa i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26809714 250 - 40214260 aaattgaataa-tatatga-ggaaagagaagggcataaggcataggaaTCCACCAGATATATAAGGAAGAGAGCATGTGTAAATATCAATCATTGTAAATCAGAACTAAT--G--AAAAAAATT--------------CTTGAAAATGATAAAACTGTT-AAAATACCTAATG--TCTGAatatattgatatatatatatgaatatatatatatatatTCATTA-GACAGTTGGAGTACAGTTGGGA--ACTA--ATTTACATATATATG---------------AACaatag i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1066636 249 + 2868945 GAAAGAAGGAAG-----AA-AGAAAAAATTTTTTTTAGGATACAg-gaatctctaggt-tgttagatgtgcaacaggtatcaacggaattccatgtaaatcagaactggc-----aaaaagactccaggaaatactgcttcaaaaa-gatcaaac--at-aaaatatttaatgcttctgaatatat-----------tgggag-------------atatcatt-gacaaatggcaaggagtttgga--gttaattttttgatacataagcagaaaactaagcaaaactaaag i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824392 476 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=12376.000000 s hg38.chr14_KI270725v1_random 160089 1 + 172810 t s panTro5.chr1 126787108 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398397 1 - 99763055 t i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5824868 1 + 72422247 t i ponAbe2.chrUn I 476 I 315 s nomLeu3.chr6 53544723 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197475 1 - 169600520 t i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875054 1 - 171882078 t i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947837 1 + 40200012 t i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393304 1 - 7633303 t i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190263 1 + 58131712 t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584177 1 - 2620224 t i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411094 1 - 10629787 t i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107992995 1 - 132174527 t i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793697 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309552 1 + 13033340 t i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391428 1 - 11604778 t i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26809964 1 - 40214260 t i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1066885 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36217914 0 - 36342412 C a score=904807.000000 s hg38.chr14_KI270725v1_random 160090 116 + 172810 tttaaa----aaattgtcagtttaacgg-aaaaaa-tgttgtgtagacttgaaattcaatca-tttatgctccatgtttcaggtgtgagtaacatttacctaattataacaGTACTAGtgtta s panTro5.chr1 126787109 112 + 228573443 tttaaa----aaattgtcagtttaaggg-aaaaac-tgttgtgtagaaatgaaatttaatca-tttatgctccatgtttcaggt----gtaacatttacctaattataacaGTACTAGtgtta i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398398 117 - 99763055 tttaaa----aaattgtcagtttaagggaaaaaaa-tgttgtgtagaaatgaaattcaatca-tttaagctccatgtttcaggtatgagtaacatttacctaattataacagtACTAGtgtta i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544724 117 + 121039945 ttttaa----aaattgtcagtttaaggggaaaaaa-tgttgtgtagaaatgaaattcaatca-tttatgctgcatgtttcaggtgtgagtaacatttacctaattataacaGCACTAGtgtta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197476 113 - 169600520 ttaaaa----aaattgtcagtttaaggg-gaaaaa----tgtgtagaaatgaaattcaatca-tttatgccccatatttcaggtgtgagtaacatttacctaactataacagtACTAGtgtta i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875055 113 - 171882078 ttaaaa----aaattgtcagtttaaggg-gaaaaa----tgtgtagaaatgaaattcaatca-tttatgccccatgtttcaggtgtgagtaacatttacctaactataacagtACTAGtgtta i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947838 113 + 40200012 taaaaa----aaattgtcagtttaaggg-gaaaaa----tgtgtagaaatgaaattcaatca-tttatgccccatgtttcaggtgtgagtaacatttacctaactataacaGTACTAGtgtta i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393305 113 - 7633303 tttaaa----aaattgtcagtttaaggg-aaaaaa----tgtgtagaaatgacattcaatca-tttatgccccatgtttcaggtgtgagtaacatttacctaactataacaGTACTAGtgtta i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190264 113 + 58131712 tttaaa----aaattgtcagtttaaggg-aaaaaa----tgtgtagaaatgaaattcaatca-tttatgctccatatttcaggtgtgagtaacatttacctaactataacagtACTAGtgtta i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584178 113 - 2620224 tttaaa----aaattgtcagtttaaggg-aaaaaa----tgtgtagaaatgaaattcaatca-ttcatgccccatgtttcaggtgtgagtaacatttacctaactataacagtgCTAGtgtta i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411095 113 - 10629787 ttttaa----aaattgtcagtttaaggg-aaaaaa----cgtgtagaaatgaaattcaatca-tttatgctccatgtttcaggtgtgggtaacatttacctaactataacagtACTAGtgtta i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107992996 111 - 132174527 -tttaa----aaattgccagttt----a-aaaaaa-cgttgtgtagaaatgaaatttaatca-tttatcctccatgtatcaggtgtaagtaacatttacctaattaaaacagtatTAGtgtta i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793698 97 + 21366645 -TTTAA----AAAC-------------------AA-TGTTGTGTAGAAATAAAATTTTATCA-TTTATGCTCCATATATCAGGTGTGAGTAACATTTACCTAATTATAACAGTACTAGtgtta i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309553 112 + 13033340 -ttaaa----aaattgccagttta---a-aaaaaa-tgttgtgtagaaataaaatttaatca-tttatgctccatatatcaggtgtgagtaacatttacctaattataacagtACTATtgtta i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391429 110 - 11604778 -tttaa----aaattgccagtt-----a-aaaaaa-tgttgtatagaaatcaaatttaatca-tttatgctccatgtgtcagatgtgagtaacatttacctaattataacagtACTAGtgtta i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36217914 109 - 36342412 --taa----------gtcaattcaagag-aagaaaatgttatgtaacaaagaaatacaacta-tttacactccctgggccagttctgagtgccattgacctagtcataacaatatgaatacta i otoGar3.GL873530 C 0 I 114 s canFam3.chr30 26809965 61 - 40214260 -ttcagtattagactattatttta-----gagata--------tagaagtaaaattcaa---------------------------aagca----ttgctaaatta----------------- i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1066885 113 + 2868945 -----a----aaatgatcaaatcaagga-aagaaaattctgcagaagaaagaaatgtaaccattttttgctagatgggtcagttgtaagtagcatttaccaagtaataataatatgaatgcta i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=18626.000000 s hg38.chr14_KI270725v1_random 160206 2 + 172810 ct s panTro5.chr1 126787221 2 + 228573443 ct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398515 2 - 99763055 ct i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544841 2 + 121039945 ct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197589 2 - 169600520 ct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875168 2 - 171882078 ct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947951 2 + 40200012 ct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393418 2 - 7633303 ct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190377 2 + 58131712 ct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584291 2 - 2620224 ct i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411208 2 - 10629787 ct i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993107 2 - 132174527 ct i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793795 2 + 21366645 cc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309665 2 + 13033340 ct i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391539 2 - 11604778 ct i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26810027 2 - 40214260 tt i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1066998 2 + 2868945 at i dasNov3.JH579377 C 0 I 283 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36218023 114 - 36342412 I a score=589970.000000 s hg38.chr14_KI270725v1_random 160208 70 + 172810 ggaaaaagaggtcccgatccacacttcaagagatggtttttgggcctcacacaggaaagaattcaaggtg s panTro5.chr1 126787223 70 + 228573443 ggaaaaagtggtcccaatccatgcttcaagagagggttcttgggcctcacacaggaaagaattcaaggtg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398517 70 - 99763055 ggaaaaaggggtcccgatccagacttcaagagagggttctttggcctcacacaggaaagaattcaaggtg i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544843 70 + 121039945 ggaaaaaggagtcctgatccagactttaagagagggttcttgggcctcacacagcaaagaattcagcgtg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197591 70 - 169600520 ggaaaaaggggtcctgatccagacttcaagaaagggttcttgggcctcaagcaggaaagaattcaaggtg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875170 70 - 171882078 ggaaaaaggggtcctgatccagacttcaagaaagggttcttgggcctcaagcaggaaagaattcaaggtg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26947953 70 + 40200012 ggaaaaaggggtcctgatccagacttcaagaaagggttcttgggcctcaagcaggaaagaattcaaggtg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393420 70 - 7633303 ggaaaaaggggtcctgatccagacttcaagaaagggttcttgggcctcaagcaggaaagaattcaaggtg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190379 70 + 58131712 ggaaaaaggggtcccgatccagacttcaagagagggttcttgggcctcaagcaggaaagaattcaaggtg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584293 70 - 2620224 ggaaaaaggggtcctgatccagacttcaagaaagggttcttgggcctcaagcaggaaagaattcaaggtg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411210 70 - 10629787 ggaaaaaggggtcctgatccagacttcaagagagggttcttgggcctcaggaaggaaagaattcaaggtg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993109 70 - 132174527 ggataaaggggtcctgatccagacttcaagagagggttcttaggcctcacacaggaaagaattcaaggtg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793797 70 + 21366645 ggataaaggggtcctgatccagacttcaagagagggttcttaggcctcacacaggaaagaattcaaggtg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309667 70 + 13033340 ggataaaggggtcctgatccagacttcaagagagggtccttaggcctcacacaggaaagaattcaaggtg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391541 69 - 11604778 ggataaaggggtcctgatccagacttcaagagagggttcttaggcctcacacagg-aagaattcaaggtg i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26810029 24 - 40214260 gaaagaa---------attt---cttcagaggaggg---------------------------------- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36218023 114 - 36342412 I a score=514237.000000 s hg38.chr14_KI270725v1_random 160278 78 + 172810 agtcacagagtacaatgag-aagaagacatagtttattgaaa-----------gctactgccttttagagtagggtgtcctcagaaagc--a s panTro5.chr1 126787293 46 + 228573443 agtcacagagtaccatgag-aagaagacatagtttat-------------------------------------------tcagaaagc--a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398587 78 - 99763055 agtcacagagtacaatgag-aagaagagatagtttattgaaa-----------gctactgccttttggagtagggcgtcctcagaaagc--a i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544913 78 + 121039945 agtcacagagtacaatgag-aagaagacatagtttattgaaa-----------gctactgcctttcagagtagggcgtcctcagaaagc--a i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197661 78 - 169600520 agtcacagagtacaatgag-aagaagacatagtttatagaaa-----------gctgctgccttttagagtagggtgtcctcagaaagc--a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875240 78 - 171882078 agtcacagagtacaatgag-aagaagacatagtttatagaaa-----------gctgctgccttttagagtaggatgtcctcagaaagc--a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948023 78 + 40200012 agtcacagagtacaatgag-aagaagacatagtttatagaaa-----------gctgctgccttttagagtagggtgtcctcagaaagc--a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393490 78 - 7633303 agtcacagagtacaatgag-aagcagacatagtttatagaaa-----------gctgctgccttttagagtagggtgtcctcagaaagc--a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190449 78 + 58131712 agtcacatagtacaatgag-aagaagatatagtttatagaaa-----------gctgctgccttttagagtagggtgtcctcagaaagc--a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584363 78 - 2620224 agtcacagagtacaatgag-aagaagacatagtttatagaaa-----------gctgctgccttttagagtagggtgtcctcagaaagc--a i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411280 78 - 10629787 agtcacagagtacaatgag-aagaagacatagtttatagaaa-----------gctagtgccttttagagtagggtgtcctcagaaagc--a i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993179 74 - 132174527 agtctcagagtacaatgag-aagag---atagtttattgaaa-----------gctattgccgtctagagtagggcatcctcagaaagc--- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793867 72 + 21366645 ag--tcagagtacagtgaa-aagag---atagtttattgaaa-----------gctattgccttctagagtagggcgtcctcagaaagc--- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309737 75 + 13033340 agtcacagagtacaatgag-aagag---atagtttattgaaa-----------gctattgccttctagagtagggcgtcctcagaaagca-- i cebCap1.NW_016107324v1 C 0 I 22 s aotNan1.NW_018501505v1 6391610 75 - 11604778 agtcagagaatacaatgag-aagag---atagtttattgaaa-----------gctattgccttctagagtagggcgtcctcagaaagc-a- i aotNan1.NW_018501505v1 C 0 I 22 s otoGar3.GL873530 36218137 88 - 36342412 ggtttcagaattaaactagtacttagatatggagaattgaaatccaaggaattgctacattaattgaaagaaatgtttcccaagaaga---- i otoGar3.GL873530 I 114 C 0 s canFam3.chr30 26810053 44 - 40214260 ----aca-aatgcaatgga-aggaa-----------ttggat-----------attgccattttatataaca-------------------- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=70097.000000 s hg38.chr14_KI270725v1_random 160356 12 + 172810 agca--aa-ggaatg s panTro5.chr1 126787339 12 + 228573443 agtg--aa-ggaatg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398665 12 - 99763055 agcg--aa-ggaacg i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53544991 12 + 121039945 agcg--aa-ggaaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197739 12 - 169600520 agca--aa-ggaacg i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875318 12 - 171882078 agca--aa-ggaacg i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948101 12 + 40200012 agca--aa-ggaacg i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393568 12 - 7633303 agcg--aa-ggaacg i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190527 12 + 58131712 agcg--aa-ggaatg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584441 12 - 2620224 agtg--aa-ggaacg i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411358 12 - 10629787 agca--aa-tgaacg i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993253 12 - 132174527 agtg--aa-ggagcc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793939 12 + 21366645 agtg--aa-ggagcc i saiBol1.JH378136 C 0 C 0 s otoGar3.GL873530 36218225 13 - 36342412 agca--aatgggatg i otoGar3.GL873530 C 0 I 84 s canFam3.chr30 26810097 14 - 40214260 agcattga-ggaagg i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e aotNan1.NW_018501505v1 6391685 22 - 11604778 I e cebCap1.NW_016107324v1 9309812 22 + 13033340 I a score=62815.000000 s hg38.chr14_KI270725v1_random 160368 16 + 172810 caccctctttgttttc s panTro5.chr1 126787351 16 + 228573443 caccctctttgttttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398677 16 - 99763055 caccctgtttgttttc i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545003 11 + 121039945 caccctcttta----- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197751 16 - 169600520 caccctctttgtttta i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875330 16 - 171882078 caccctctttgtttta i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948113 16 + 40200012 caccctctttgtttta i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393580 16 - 7633303 caccctctttgtttta i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190539 16 + 58131712 caccctctttgtttta i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584453 16 - 2620224 caccctctttgtttta i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411370 16 - 10629787 caccctctttgtttta i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993265 11 - 132174527 catcctcctta----- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793951 11 + 21366645 catcctcctta----- i saiBol1.JH378136 C 0 C 0 s canFam3.chr30 26810111 5 - 40214260 -----ttttc------ i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36218238 84 - 36342412 I e aotNan1.NW_018501505v1 6391685 22 - 11604778 I e cebCap1.NW_016107324v1 9309812 22 + 13033340 I a score=161662.000000 s hg38.chr14_KI270725v1_random 160384 21 + 172810 ag-tttttttgttataggagtt s panTro5.chr1 126787367 21 + 228573443 ag-tttttctgttataggagtt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398693 21 - 99763055 ag-tttttctgttataggagtt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545014 21 + 121039945 ag-tttttctgttataggagtt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197767 21 - 169600520 ag-tttttcttttataggagtt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875346 21 - 171882078 ag-tttttcttttataggagtt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948129 21 + 40200012 ag-tttttcttttataggagtt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393596 21 - 7633303 ag-tttttctgttataggagtt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190555 21 + 58131712 ag-tttttctgttataggagtt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584469 21 - 2620224 ag-tttttctgttataggagtt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411386 21 - 10629787 ag-tttttctgttgtaggagtt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993276 22 - 132174527 ggttttttctgatatagcagtt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793962 21 + 21366645 gg-tttttctgagatagcagtt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309834 21 + 13033340 gg-tttttctgatatagcagtt i cebCap1.NW_016107324v1 I 22 C 0 s aotNan1.NW_018501505v1 6391707 21 - 11604778 gg-tttttctgatatagcagtt i aotNan1.NW_018501505v1 I 22 C 0 s canFam3.chr30 26810116 13 - 40214260 aa-ttttt--------gaactt i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5824869 315 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36218238 84 - 36342412 I a score=158161.000000 s hg38.chr14_KI270725v1_random 160405 25 + 172810 ttgtc--------------------------------------------------tatgtaaagactaaattgaa s panTro5.chr1 126787388 25 + 228573443 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398714 25 - 99763055 ttgtc--------------------------------------------------tatgtaaagacaaaattgaa i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5825184 25 + 72422247 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i ponAbe2.chrUn I 315 I 1200 s nomLeu3.chr6 53545035 25 + 121039945 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197788 25 - 169600520 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875367 25 - 171882078 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948150 25 + 40200012 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393617 50 - 7633303 ttgtc-------------------------tatgtaaagactaaattgaattgtgTATGTAAAGACTAAATTGAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190576 25 + 58131712 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584490 75 - 2620224 ttgtctatgtgaagactaaattgaattgtgTATGTAAAGACTAAATTGAATTGTGTATGTAAAGACTAAATTGAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411407 25 - 10629787 ttgtc--------------------------------------------------tatgtaaagactaaattgaa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993298 19 - 132174527 ttgtc--------------------------------------------------tatgtaaagactaa------ i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10793983 19 + 21366645 ttgtc--------------------------------------------------tacgtaaagactaa------ i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309855 19 + 13033340 ttgtc--------------------------------------------------tacataaagactaa------ i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391728 19 - 11604778 ttgtc--------------------------------------------------tatgtatagactaa------ i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26810129 11 - 40214260 atgtg--------------------------------------------------catata-------------- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36218238 84 - 36342412 I a score=5005.000000 s hg38.chr14_KI270725v1_random 160430 1 + 172810 t s panTro5.chr1 126787413 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398739 1 - 99763055 t i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545060 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197813 1 - 169600520 t i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875392 1 - 171882078 t i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948175 1 + 40200012 t i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393667 1 - 7633303 T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190601 1 + 58131712 t i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584565 1 - 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411432 1 - 10629787 t i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58115478 4299 - 182113224 I e dasNov3.JH579377 1067000 283 + 2868945 I e canFam3.chr30 26810140 0 - 40214260 C e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10794002 0 + 21366645 C e otoGar3.GL873530 36218238 84 - 36342412 I e aotNan1.NW_018501505v1 6391747 0 - 11604778 C e cebCap1.NW_016107324v1 9309874 0 + 13033340 C e calJac3.chr10 107993317 0 - 132174527 C a score=69586.000000 s hg38.chr14_KI270725v1_random 160431 16 + 172810 tgtctatgtA-AAGACT s panTro5.chr1 126787414 16 + 228573443 tgtgTATGTA-AAGACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398740 16 - 99763055 tgtctatgtA-AACACT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545061 16 + 121039945 tgtctatgtA-AAGACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197814 16 - 169600520 tgtgTATGTA-AAGACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875393 16 - 171882078 tgtgTATGTA-AAGACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948176 16 + 40200012 tgtgTATGTA-AAGACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393668 16 - 7633303 TGTGTATGTA-AAGACT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190602 16 + 58131712 tgtgTATGTA-AAGAAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584566 16 - 2620224 TGTGTATGTA-AAGACT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411433 16 - 10629787 tgtgTATGTA-AAGACT i colAng1.NW_012121598v1 C 0 C 0 s mm10.chr2 58119777 17 - 182113224 tgtccatgtatgaaact i mm10.chr2 I 4299 I 3 s canFam3.chr30 26810140 1 - 40214260 ----------------t i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10794002 0 + 21366645 C e otoGar3.GL873530 36218238 84 - 36342412 I e aotNan1.NW_018501505v1 6391747 0 - 11604778 C e cebCap1.NW_016107324v1 9309874 0 + 13033340 C e calJac3.chr10 107993317 0 - 132174527 C a score=257135.000000 s hg38.chr14_KI270725v1_random 160447 30 + 172810 AAATTGGAAACAAAATAACAGGAAGAAGGA s panTro5.chr1 126787430 30 + 228573443 AAATTGGAAACAAAATAAGAAGAAGAAGGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398756 30 - 99763055 AAATTGGAAACAAAATAACAAGAAGAAGGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545077 30 + 121039945 AAATTGGAAACAAAATAACAAGAAGAAGGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197830 30 - 169600520 AAATTGGAAAGAAAATAACAGGAACAAGAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875409 30 - 171882078 AAATTGGAAAGAAAATAACAGGAACAAGAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948192 30 + 40200012 AAATTGGAAAGAAAATAACAGGAACAAGAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393684 30 - 7633303 AAATTGGAAAGAAAATAACAGGAACAAGAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190618 30 + 58131712 AAATTGGAAACAAAATAACAGGAAGAAGAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584582 30 - 2620224 AAATTGGAAAGAAAATAACAGGAACAAGAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411449 30 - 10629787 AAATTGGAAACAAAATAACAGGAAGAAGAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993317 26 - 132174527 ----TGAAAACAAAATAAGAAGAAGAAAGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794002 26 + 21366645 ----TGGAAATAAAGTAATAAGAAGAAAGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309874 26 + 13033340 ----TGGAAACAAAGTAATAAGAAGAAAGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391747 26 - 11604778 ----TAGAAACAAAGTAATAAGAAGAAAGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36218322 27 - 36342412 aaattaaaaacaaaaTAACAAGAAGA---A i otoGar3.GL873530 I 84 C 0 s mm10.chr2 58119797 28 - 182113224 aaattacaaatgaa--aATAAAAAGAAAAG i mm10.chr2 I 3 C 0 s canFam3.chr30 26810141 30 - 40214260 aacatcttaaaaaaataGCAAGAAGAAAGA i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1067000 283 + 2868945 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=3315473.000000 s hg38.chr14_KI270725v1_random 160477 330 + 172810 ATTTATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGGACCTACCGCTTAAAGAGTTTCATAGTG-GTTACCAGTAGTCATTTTGTGATG-TTTATCGATGTGATTCTTGAATGTAAAAAGGACTACATATA--A-GATTTC-ATATTCTGAATTAATGTGCAGCATATTATGTT-AAATTGTTAACCAATTTAAAaaattttt-gagtttaaattagaaatcttg----------------------------ttgttctatttataaatctagtacatta---aaaatta-tttttaagggggactttgattaatgtttg-gtccatttacaacttagttaattaaactcccttaaagattt s panTro5.chr1 126787460 329 + 228573443 ATTTATGCATAATCT--TCAAATCAT--GAGGAGCAAAATTCA-TAC-----AAGACCTATGGCTTAAAGAGTTTCATAGTG-GTTACCAGTGGGCATTTTGTGATG-TTTATCAATGTGATT-TTGAATGTAAAAAGGACTACTTTTT--A-GGTTTC-ATACACTGAATTAATGTGCAGCATATTATGTT-AAATTGTTAACCAATTTAAAaaattttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagtacatta---aaaatta-tttttaagggggactttgattaatgtttg-gtccatttacaacttagttaattaaactcccttaaagattt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55398786 317 - 99763055 ATTTATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGGACCTATCGCTTAAAGAGTTTCATAGTG-GTTACCAGTGGGC---------------ATCAATGTGATTCTTGAATGTAAAAAGAACTATTTACA--A-GATTTC-ATATTTTGAATTAATGTGCAGCATCTTATGTT-AAATATTTAACCAATTTAAAaaattttt-gagttcaaattagaaatctta----------------------------ttattctattcataaatctagtacaata---aaaatta-tttttaagggggactttgattaatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545107 330 + 121039945 ATTTATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AAGACCTATCGCTTAAAGAGTTTCATAGTG-GTTACcagtgggcattttgtgatg-tttatcaatgtgattcttgaatgtaaaaaggactatttata--a-gatttc-gtattttgaattaatgtgcagcatattatgtcaaaatttttaaccaattt-aaaaattttt-gagtttaaattaaaaatctta----------------------------ttgttctatttataaatctagtacattt---aaaatta-tttttaagggggac-ttgattaatgtttgcttccatttacgacttagttaattaaactcccttaaagattt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146197860 318 - 169600520 ATTAATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGAACCTGTTGCTTAAAGAGTTTCATAGCG-GTTATCAGCGGGCATTTTGTGATG-TTCATTAGTGTGATTCTTGAATGTAAAAAGCACTATTTACA--A-GATTTC-ATATTTTGAATTA--------------ATGTTAAATTTTTTAACCAATATTttaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagcacattt---aaaatta-tttttaagggggactttgaataatgcttgcttccatttacaacttagttaattaaactcccttaaagattt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875439 318 - 171882078 ATTAATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGAACCTGTTGCTTAAAGAGTTTCATAGCG-GTtatcagcgggcattttgtgatg-ttcattagtgtgattcttgaatgtaaaaagcactatttaca--a-gatttc-atattttgaatta--------------atgttaaattttttaaccaatattttaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagcacattt---aaaatta-tttttaagggggactttgaataatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948222 318 + 40200012 ATTAATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGAACCTGTTGCTTAAAGAGTTTCATAGCG-GTTATCAGCGGGCATTTTGTGATG-TTCATTAGTGTGATTCTTGAATGTAAAAAGCACTATTTACA--A-GATTTC-ATATTTTGAATTA--------------ATGTTAAATTTTTTAACCAATGTTttaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagcacattt---aaaatta-tttttaagggggactttgaataatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4393714 332 - 7633303 ATTAATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGAATCTATTGCTTAGAGAGTTTCATAGCG-GTTATTAGCGGGCAttttgtgatg-ttcatcagtgtgattcttgaatgtaaaaaggactatttaca--a-gatttc-atattttgaattaatgtgcagcatatcatgttaaattttttaaccaatgttttaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagcacattt---aaaagta-tttttaagggggactttgaataatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190648 320 + 58131712 ATTAATGCATAATCT--TCAAATCAT--GAGGAGTAAAATTCA-TAC-----AGAACCTATTGCTTAAAGAGTTTCATAGCG-GTTATCAGCGGGCATTTTGTGAT---------GTgtgattcttgaatgtaaaaaggactatttaca--a-gatttc-atattttgaattaatgtgcagcatatcatgttaaattttttaaccaatgttttaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagcacattt---aaaatta-tttttaaggggggctttgattaatgtttgcttccatttacaac----ttaattaaactcccttgaagattt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584612 332 - 2620224 ATTAATGCATAATCT--TCAAATCAA--GAGGAGTAAAATTCA-TAC-----AGAACCTATTGCTTAAAGAGTTTCATAGCG-GTtatcagcgggcattttgtgatg-ttcatcagtgtgattcttgaatgtaaaaaggactatttaca--a-gatttc-atattttgaattaatgtgcagcatatcatgttaaattttttaaccaatgttttaaaatttt-gagtttaaattagaaatctta----------------------------tcgttctatttataaatctagcacattt---aaaatta-tttttaagggggactttgaataatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411479 331 - 10629787 ATTGATACATAATCT--TCAAATCAC--GAGGAGTAAAATTCA-TAC-----AGAACCTATTGCTTAAAGAGTTTCATAGCA-GTTATCAGCAGGCAttttgtgatg-ttcatcagtgtgattcttgaatgt-aaaaggactatttaca--a-gatttc-atattttgaattaatgtgcagcatatcatgttaaattttttaaccaatgttttaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagcgcattt---aaaatta-tttttaagggggactctgattaatgtttgcttccacttacaacttagttaattaaactcccttaaagattt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993343 332 - 132174527 ATTGATACATGATCT--TCAAATCATTAGAGGAGTAAAATTCA-TAC-----AAGATCAATTGCTTACAGAGTTTCATGGCA-GTTACCAGTGGGCATTTTGTGAT--TTTTTCAGTGTGATTCTTGAATGTAAAAAGGACTATGTATA--A-GGTTTC-ATATTTTAAATTAATGTGAAGCACATTATGTT-AACTTTTTAACCAACCATTCAAAGTTTT-GTGTTTAAATTAGAAATCTTA----------------------------TTGTTCTATTTATAAATCTAGTACATTT---AAAATTA-TTTTTAAGGGGAACTTTGATTAATGTTTGCTTCCATTTACAACTTAGTTAATTAAACTCCCTTAAAGATTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794028 331 + 21366645 A-TGATGCATGATCT--TCAAATCATTAGAGGAGTAAAATTCA-TAC-----AAGACCAATTGCTTACAGAATTTCATGGCA-GTTACcagtgggcattttgtgatg-tttttcagtgtgattcttgaatgtaaaaaggactatttata--a-ggtttc-atattttgaattaatgtgaagaacattatgtt-aa-tttttaaccaactattcaaaatttt-gagtttgaattagaaatctta----------------------------ttgttctatttataaatctagtacattt---aaaatta-tttttaaggggaactttgattaatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9309900 332 + 13033340 ATTGATGCATGATCT--TCAAATCATTAGAGGAGTAAAATTCA-TAC-----AAGACCAATTGCTTACAGAGTTTCATGGCA-GTTACcagtgggcattttgtgatg-tttttcagtgtgattcttgaatgtaaaaaggagtatttata--a-ggtttt-atattttgaattaatgtgaagcacattatgtt-aa-attttaaccaactattcaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatccagtacattt---ataatta-tttttaaggggaactttgattaatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6391773 332 - 11604778 ATTGATGCATGATCT--TCAAGTCATTAGAGGAATAAAATTCA-TAT-----AAGACCAATTGCTTACAGAGTTTTATGGCA-GTTACcagtgggcattttgtgatg-tttttcagtgtgattcttg-atgtaaaaaggactatttata--a-ggtttc-atattttgaattaatgtgaagcacattatgtt-aaatttttaaccaactattcaaaatttt-gagtttaaattagaaatctta----------------------------ttgttctatttataaatctagtacattt---aaaatta-tttttaaggggaactttgattaatgtttgcttccatttacaacttagttaattaaactcccttaaagattt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36218349 327 - 36342412 ATCGGTGCATGATCT--TCAGATGAG--AGGAAGTAAATTCCA-TACACTATAGGACCTGTGAATTACAGACTTTTCAGGCA-GTTACcaatgggcattttgtattg-tttttcagtgtgactcttgaatataaaaagaactatttataata-agtttc-atattttaaattaatatacagcatgctaaaataaaaattctttatgtttttaaaatttttt-taatttaaattagaaa---ta----------------------------ttattctatttataaactgaagatattt---aaaatta--ttttaagagagactttgatgaatgtttggttccatttacaacttagttaattaaactccctc-------- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58119825 267 - 182113224 ATT--TGTGATATTT--TTTCATTAT--GGAACATAAATGCCA-TGC-----ATGAACTGTGGCTTAT-GGCTCTCACAGCATGATATCAGTGAGCATTGTAAGGTG-CCTTTCA-TCTGACTCTTGGATGTCAAAAG-ACTATTTACA--A-A-----------------------------------------------------------aagtttta-gattttaaattaaaaatgtct----------------------------ttgtcttgtttgtatatct--cacattt---aaaataa--tcctaaggaggactttgattaatgtttgtctccatttacaacttagttaattaaactcccttaaagattt i mm10.chr2 C 0 C 0 s canFam3.chr30 26810171 328 - 40214260 AATGATGCATGATCT--TCAGATTAT--AGAGAGTAAAATTTC-TAC-----AGGACCTATGGCTCAAAGTGTTTTATAGCA-ACTGTAAATGGGCATTTTGGGGTGTTTTCTTACTATTTCTTTTTAGTATAAAAAGGATTATTGACA--ATGATTTCAATATTTTACATTAATGTGCAGCATATTAAAATAAGAACTTAAAACACTT-----AAATTTG-GAGTTTAAAAATGAAAACtta-------------------------------ttctagttataaaattcatatattt---aaaaataatttttaagggggatttttgtaaatgtttggttccgtttccaatttagttaataaaaatcacttaaaGCTTT i canFam3.chr30 C 0 I 1369 s dasNov3.JH579377 1067283 363 + 2868945 ATTGATGCATG-TCTGGTAAGACCAT--GGAAAGTAAAATCCATTAA-----AGGACCTATGACAAATAAAATTTTATAACA-GCAgtcaatgggcatttggaggtg-cttttcagggtgacctctgaatataaaaagaactatttaca--a----taa-atttgctaaattaatgtgcagtatatgaaaataaaaatttcacaatgtttttcaaaattttagaattaaaattagaaatcttcaaattataaaattttatatttatttactctatcatatttataaacctagtacattttaaaaaatca-catttatgaggagctttaattaatgtttggttccatttacaacctagttaattaaactcctttaaagattt i dasNov3.JH579377 I 283 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=2883067.000000 s hg38.chr14_KI270725v1_random 160807 301 + 172810 taaactacatttacaaatttaatatgttgaattatctttatgaacattttaattatcggactaacaaataaagcctt-cagagtacttaaacaacccttatagagctaataaattaaactcacaaaatcatgaatgttaaattatcttcaatg-ttaaaccactactggcaactcggtaa---------aaccgcttattatttca-actaaaaaacaaccccaatatctaaaa----tattctgttacacattgaaaattggaatgtaaaatgctaatct----atA------TTTAAATAC-----TAATA-CAATTATAAATAAATATCA s panTro5.chr1 126787789 299 + 228573443 taaactacatttataaatttaatatgttgaattatctttgtgaagattttagttatcagactaacaaataaagcctt-cagagtacttaaacaacccttatagagctaataaattaaactcacaaaatcatgaatcttaaattatcttcaatg-ttaaaccactactggcaactcggtaa---------aaccacttataatttca-actaaaaa--aaccccaatatctaaaa----tattctgttacacatttaaaattggaatgtaaaatgctaatct----atA------TTTAAATAC-----TAATA-CAATTATAAATAAATATCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399103 304 - 99763055 taaactacatttataaatttaataggttcaattatctttgtgaacattttaattataggactaacaaataaaaccttccagagtacttaaacaacccttatagagctaataaattaaactcacaaaatcctgaatcttaaattatcttaaatg-ttaaaccactactggcaacatggtaa---------aaccgcttataatttca-actcaaaa--aa-accaatatctaaat----tattctgttacacatttaaaattggaatgtaaaatgctaatct----ata------tttaaatactaatataata-caattatgaataaatatca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545437 301 + 121039945 taaactacgtttataaatttaatatgttcaattatctttgtgaacattttaattatcggactaacaaataaaaccttccagagtacttaaacaaccctcatagagctaataaattaaactcacaaaatcatgaatcttaaattttcttaaatg-ttaaaccactactggcaactcggtaa---------aaccgcttataattgca-actcaaaaaaaa-aaaaatatctaaat----tattctgttacacatttaaaattggaatgtaaaatgctaatct----atA------TTTAAATAC-----TAATA-CAATTATGAATAAATATCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198178 299 - 169600520 t-aactacatttataaatttaatatgttcaattatctttgtgaacattttaattatcggactaacaaataaaaccttccagagtacttaaacaacccttatagagctaataaattaaacttacaaaatcatgaatcttaaattatcttgaagg-ttaaaccactgctggcaactcggtaa---------aaccgcttataatttca-actaaaag--aaaaccagtatctaaaa----tattctgttatacatttaaaattggaatgtaaaatgcaaatct----ata------gttaaatac-----aaata-caattatgaataaatatca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147875757 299 - 171882078 t-aactacatttataaatttaatatgttcaattatctttgtgaacattttaattaccggactaacaaataaaaccttccagagtacttaaacaacccttatagagctaataaattaaacttacaaaatcatgaatcttaaattatcttgaagg-ttaaaccactgctggcaactcggtaa---------aaccgcttataatttca-actaaaag--aaaaccagtatctaaaa----tattctgttatacatttaaaattggaatgtaaaatgcaaatct----ata------gttaaatac-----aaata-caattatgaataaatatca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26948540 303 + 40200012 t-atctacatttataaatttaatatgttcaattatctttgtgaacattttaattatcggactaacaaataaaaccttccagagtacttaaacaacccttatagagctaataaattaaacttacaaaatcatgaatcttaaattatcttgaagg-ttaaaccactgctggcaactcggtaa---------aaccacttataatttca-actaaaag--aaaaccagtatctaaaa----tattctgttatacatttaaaattggaatgtaaaatgcaaatctataaata------gttaaatac-----aaata-caattatgaataaatatca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394046 303 - 7633303 t-aactacatttataaatttaatatgttcaattatctttgtgaacattttaattatcagactaacaaataaaaccttccagagtacttaaacaacccttatagagctaataaattaaacttacagaatcatgaatcttaaattatcttgaagg-ttaaaccactgctggcaactcggtaa---------aaccgcttataatttca-actaaaag--aaaaccagtatctaaaa----tattctgttatacatttaaaattggaatgtaaaatgcaaatctatAAATA------GTTAAATAC-----AAATA-CAATTATGAATAAATATCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36190968 301 + 58131712 taaactacatttataaatttaatatgttcaattatctttgtgaacattttaattatcagactaac----aaaaccttccaaagtacttaaacaacccttatagagctaataaattaaacttacaaaatcatgaatcttaaattatctcacaggtttaaactactgctggcaactcggtaa---------aaccgcttataatttca-actaaaag--aaaaccagtatttaaaa----tattctgttatgcatttaaagttggaatgtaaaatgctaatctataaata------tttaaatac-----aaata-caattatgaataaatatca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2584944 303 - 2620224 t-aactacatttataaatttaatatgttcaattatctttgtgaacattttaattatcggactaacaaataaaaccttccagagtacttaaacaacccttatagagctaataaattaaacttacaaaatcatgaatcttaaattatcttgaagg-ttaaaccactgctggcaacttggtaa---------aaccgcttataatttca-actaaaag--aaaaccagtatctaaaa----tattctgttatacatttaaaattggaatgtaaaatgcaaatctatAAATA------GTTaaatac-----aaata-caattatgaataaatatca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8411810 304 - 10629787 taaactacatttataaatttaatgtgttcaattatctttgtgaacattttaattatcggactaacaaataaaaccttccagaatacttaaacaacccttatagagctaataaattaaacttacaaaatcatgaatcttaaattatcttaaagg-ttaaaccactgctggcaactcggtaa---------aatcacttataatttca-actaaaag--aaaaccagtatctaaaa----tattctgttatacatttaaaattggaatgtaaaatgctaatctataaata------tttaaatac-----aaata-caattatgaataaatatca i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107993675 295 - 132174527 TAAACTACATTTATAAATTTAATATGTTCAATTATCTTTGTGAACATTTTAATTATCAGACTAACAAACAAAACCTTCCAGAGTACTT----AACCCTTATAGAGCTAATAAATTGAACTCACAAAACCATGAATCTTACATTATCTTAAATG-TTAAACCACTACTGGCAACTCAGTAA---------AACCACTTAAAATTTCA-ACT-AAAA--AA----AAAATCTAAAA----TATTCTGTTACACATTTCAAATTAGAATGTAAAATGCTAATCTATAAATA------TTTAAATAC-----TTATG-CAATTATGCATAAATATAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794359 296 + 21366645 taaactacatttataaatttaatatgttcacttatctttgtgaacattttaataatcagactaacaaacaaaaccttccagagtactt----aatccttatagagttaataaattgaactcacaaaatcatgaatcttagattatcttaaatg-ttaaaccactactggcaactcagtaa---------aaccacttaaaatttca-actcaaaa--aa----aaaatctaaaa----tattttgttacacatttcaaattagaatgtaaaatgctaatctataaata------tttaaatac-----ttatg-caattatggataaatataa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310232 296 + 13033340 taaactacatttataaatttaatatgttcagttatctttgtgaacattttaattatcagactaacaaacaaaaccttccagagtactt----aacccttatagagctaataaactgaactcacaaaatcatgaatcttagattaccttcaatg-ttaaaccactactggcaactcagtaa---------aaccacttaaaatttca-actcaaaa--aa----aaaatctaaaa----tattctgttacacatttcaaattagaatgtaaaatgctaatctataaata------tttaaatac-----tcatg-caattatggataaatataa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392105 294 - 11604778 taacctacatttataaatttaatatgttcaattatctttgtgaacattttaattatcagactaacaaacaaaaccttccagagtactt----aacccttatagagctaataaattgaactcacaaaatcatgaatcttacattatcttaaatg-ttaaaccactactggcaactcagtaa---------aaccacttaaaatttca-actc--aa--aa----aaaatctaaaa----tattctgttacacatttcaaattagaatgtaaaatgctaatgtataaata------tttaaatac-----ttatg-caattatggataaatataa i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36218676 240 - 36342412 --aactgcatttataaatttactatgtttaattatctttgggaacacttcaattatttgactaa--------------cagagtactt----aaaacttctaaagctaataa----aacttacagaatcatgaatcttaagttatgtgaaatg-ttAAACCACTG-------------------------ACCAGTTATACTTTTGCACT-------AG--------CCTAAAC----TACAGAGTTGACCATT-------------TAAAATGCTCATCTATAAACA------TTTAAATAC-----TAATACCGATAATAAATAAACATCA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120092 294 - 182113224 caaacttcatttataaatttaatatgttcaattatctttgtgaacactctaattat----cctacaaacaaaacattacagaatatgaaagcaatccatataaagctactaagttaaacttataaaaccatgaatctctagtttccttaaact-gtaaatcactattggcaacttagcaa---------aactggagact-tttca-tctcaaaa--ac----agatgcttgaa----tattcacctgtgcatttaaaacagga--gtcagatgttaatctatAAATGCATCCTTGTTATCTC-----TGGTA-CATGT-----TAGATCTAA i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1067646 302 + 2868945 ttaacttcatttacaaatttaaaattctcagttatctttgtgaatactttaa-aatctaactaacaaacaaaaccttccaaagtacttaaacaattcttataaagttaataaatcaag-taataaaatggtaaatcttaaattatcttaaatg-ttaaaccactaatggcaacttactaaaaacctcttaacctcttatactttaa-cctgaaaa--acaa--aatgcctaaaataattaatcaggtacacacttaaaattggaatttaaagtgttagtctgtaaaaa------ttt-----------------aaattatgaataaatataa i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26810499 1369 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=778396.000000 s hg38.chr14_KI270725v1_random 161108 75 + 172810 CATCTCTAAAGTATAAATATTATAGTTTTCATATACTT------CATCATCTCTAA---ACTT--------TTTTTCAA-----TGTTTTCCTGGGA- s panTro5.chr1 126788088 75 + 228573443 CGTCTCTAAAGTATAAATATTATAGTTTTCCTATACTT------CATCATCTCTAA---ACTT--------TTTTTCAA-----TGTTTTCctggga- i panTro5.chr1 C 0 I 283 s panPan2.chr15 55399407 74 - 99763055 catctccaaagtataaatattatagttttcatatattt------catcatctct-c---actt--------tttttcaa-----tgtttccctggga- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545738 75 + 121039945 CATCTCTAAAGTATAAATATTATAGTTTTCATATACTT------CATCATCTCTAA---ACTT--------TTTTTCAA-----TGTTTCCCTGGGA- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198477 75 - 169600520 catctctaaagtataaatgttatagttttcatatactt------catcatctctaa---actt--------tttttcaa-----ggttttcctggga- i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147876056 75 - 171882078 catctctaaagtataaatgttatagttttcatatactt------catcatctctaa---actt--------tttttcaa-----ggttttcctggga- i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 26948843 75 + 40200012 catctctaaagtataaatgttatagttttcatatactt------catcatctctaa---actt--------tttttcaa-----ggttttcctggga- i macNem1.NW_012010577v1 C 0 I 2 s cerAty1.NW_012000887v1 4394349 75 - 7633303 CATCTCTAAAGTATAAATGTTATAGTTTTCATATACTT------CATCATCTCTAA---ACTT--------TTTTTCAA-----GGTTTTCCTGGGA- i cerAty1.NW_012000887v1 C 0 I 4 s chlSab2.chr26 36191269 75 + 58131712 catctctaaagtataaatgttatagttttcatagactt------catcatctctaa---actt--------tttttcaa-----ggttttcctggga- i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 2585247 75 - 2620224 catctccaaagtataaatGTTATAGTTTTCATATACTT------CATCATCTCTAA---ACTT--------TTTTTCAA-----GGTTTTCCTGGGA- i manLeu1.NW_012108674v1 C 0 I 2 s colAng1.NW_012121598v1 8412114 75 - 10629787 catctctaaagtataaatgttatagttttcatatactt------catcatctctaa---actt--------tttttcaa-----ggttttcctggga- i colAng1.NW_012121598v1 C 0 I 1 s calJac3.chr10 107993970 75 - 132174527 TATCTCTAAAGTGTAAATATTATAGTTTTCATATACTT------CATGATTTCTAA---CCTT--------TTTTTTAA-----TATTTTCTTGGGA- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794655 75 + 21366645 catctctgaagtataaatattatagttttcatatactt------catcatttctaa---cctt--------tttttcaa-----tattttctttgga- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310528 75 + 13033340 catctctaaagtataaatattatagttttcatatactt------agtcatttctaA---CCCT--------TTTTTCAA-----TATTTTCTTTGGA- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392399 75 - 11604778 catctctaaagtataaatattatagtgttcatatactt------catcatttctaa---cctt--------tttttcaa-----tattttcttggga- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36218916 70 - 36342412 -----CTAAAAAGTGAATATTCTAGTTTTTATATACTT------CATCATCTCTAT---TCTT--------TATTTAAA-----AGATTCCACAGAG- i otoGar3.GL873530 C 0 I 2 s mm10.chr2 58120386 76 - 182113224 GGGCTCTAAAATACAGACATCAT-GCTTTGACAGACTT------TATAACCTTTAGTATATTT--------CATTTCAA------GTTTCTTTAGTA- i mm10.chr2 C 0 I 17 s canFam3.chr30 26811868 86 - 40214260 CATCTCTAAAATATGAATATTATAGTTTTTATAGTTTTTATTTACATCATCTCTGT---ACTT--------AAAAAAAAAAAAATGGTTTCCCAGGT- i canFam3.chr30 I 1369 I 14 s dasNov3.JH579377 1067948 84 + 2868945 catctgtaaaatattaataatgtagttttgatttactt------catcatctctat---acttttaaaaagtttcccta-----ttttttttttttaa i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=1512722.000000 s hg38.chr14_KI270725v1_random 161183 149 + 172810 TAAAAAAAATCATAA-AA-ACAATTACA-------------------TTC--------TCTTAAGC-AAATGAGGTTATCACCTC-AGTGAGTTGTGGCTACTTTTTCAGGTTGTTTACCTATCAGAGATTTTGACTGG-AAAATGAGATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT s panTro5.chr1 126788446 149 + 228573443 taAAAAAAATCATAA-AA-ACAATTACA-------------------TTC--------TCTTAAGC-AAATGGGGTTATCACCTC-AGTGAGTTGTGGCTACTTTTTCAGGTTGTTTACCTATCAGAGATTTTGACTGG-AAAATGAGATCTGGAGCCTCAGAT-ACTCAGGGTAATTGTTT i panTro5.chr1 I 283 C 0 s panPan2.chr15 55399481 148 - 99763055 -taaaaaaATCATAA-AA-ACAATTACA-------------------TTC--------TCTTAAGC-AAATGGGGTTATCACCTC-AGTGAGTTGTGGCTACTTTTTCAGGTTGTTTACCTATCAGAGATTTTGACTGG-AAAATGAGATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545813 148 + 121039945 -TAAAATAATCATAA-AA-GCAATTACA-------------------TTC--------TCTTAAGC-AAATGGGGTTATCAGCTC-AGTGAGTTGTGGCTACTTTTTCAGGTTGTTTACCTATCAGAGACTTTGACTGG-AAAATGAGATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198553 148 - 169600520 aaaaaaaAATCATAA-AA-ACAATTACA-------------------TTC--------TGTTAAGC-AAATGGGGTTATCACCTC-AGAGAGTTGTGGCTACTCTTTCAGATTGTTTACCTATCAGAGATTTTGACTGG-AAAATG-GATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147876132 148 - 171882078 aaaaaaaAATCATAA-AA-ACAATTACA-------------------TTC--------TGTTAAGC-AAATGGGGTTATCACCTC-AGAGAGTTGTGGCTACTCTTTCAGATTGTTTACCTATCAGAGATTTTGACTGG-AAAATG-GATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 26948920 148 + 40200012 aaaaaaAAATCATAA-AA-ACAATTACA-------------------TTC--------TGTTAAGC-AAATGGGGTTATCACCTC-AGAGAGTTGTGGCTACTCTTTCAGATTGTTTACCTATCAGAGATTTTGACTGG-AAAATG-GATCTGGAACTTCAGAT-ACTCAGGGTAATTGTTT i macNem1.NW_012010577v1 I 2 C 0 s cerAty1.NW_012000887v1 4394428 148 - 7633303 AAAAAAAAATCATAA-AA-ACAATTACA-------------------TTC--------TGTTAAGC-AAATGGGGTTATCACCTC-AGAGAGTTGTGGCTACTCTTTCAGATTGTTTACCTATCAGAGATTTTGACTGG-AAAATG-GATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i cerAty1.NW_012000887v1 I 4 C 0 s chlSab2.chr26 36191345 149 + 58131712 taaaaaaAATCATAA-AA-ACAATTACG-------------------TTC--------TCTTAAGC-AAATGGGGTTATCACCTC-AGAGAGTTGTGGCTACTTTTTCAGATTGTTTACCTATCAGAGATTTTGACTAG-AAAATG-GATCTGGACCTTCAGATAACTCAGGGTAATTGTTT i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 2585324 148 - 2620224 AAAAAAAAATCATAA-AA-ACAATTACA-------------------TTC--------TGTTAAGC-AAATGGGGTTATCACCTC-AGAGAGTTGTGGCTACTCTTTCAGATTGTTTACCTATCAGAGATTTTGACTGG-AAAATG-GATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i manLeu1.NW_012108674v1 I 2 C 0 s colAng1.NW_012121598v1 8412190 148 - 10629787 taaaaaaaatcataa-aa-acaattacg-------------------tTC--------TCTTAAGC-AAATGGGCTTATCACCCC-AAAGAGTTGTGGCTGATTTTTCAGATTGTTTACCTATCAGAGATTTTGACTGG-AAAATG-GATCTGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i colAng1.NW_012121598v1 I 1 C 0 s calJac3.chr10 107994045 146 - 132174527 --TAAAACCTCATAA-AA-ACAATTACG-------------------TTC--------TCTTACGC-AAAT-GGGTTATCACCCC-AGTAAGTTGTGGTTACATTTTCAGGTTGTTTACCTATCGGAGATTTTGATTGG-AAAATGAGATCAGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794730 147 + 21366645 --taaaaCCTCATAA-AA-ACAATTACG-------------------TTC--------TCTTAAGC-AAATGGGGTTATCACCCC-AATAAGTTGTGGCTACTTTTTCAGGTTGTTTGCCTATCAGAGATTTTGATTGG-AAAATGAGATCAGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310603 147 + 13033340 --TAAAACCTCATAA-AA-ACAATTACG-------------------TTC--------TCTTAAGC-AAATGGGGTTATCACCCC-AGTAAGTTGTGCCTACTTTTTCAGGTTGTTTACCTATCAGAGATTTTGATTGG-AAAATGAGATCAGGAGCTTCAGAT-ACTCAGGGTAATTGTTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392474 142 - 11604778 --taaaacctcataa-aa-acaattatg-------------------tTC--------TCTTAAGC-AAATAGGGTTATCACCCC-ACTAAGTTGGGG-TACTTTTTCAGGTTGTTTACCTATCAGAGATTTTGATTGG-AAAATGAAATCAGGAGCTTCAGAT-ACTCAGGGTAA----TT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36218988 150 - 36342412 TAAGGGGGAAGATAGTGA-GCAACTA-A-------------------TTA--------TGTTAAGC-AAACAAGGTTATCAATGCAAGTAAATTGTGGCTACTTTCTCAGGTTGATTACCTATCAGAAATTTTGATCAG-AAAATGAGATCTGAAACTGCAAAT-ACTCAGAGTAATTGGAT i otoGar3.GL873530 I 2 C 0 s mm10.chr2 58120479 167 - 182113224 TGGAAAATACCATGT-AATGTAGTTACAGATATAAACTAAGAGTTTTTTCTTTAAAAATTTTAAAC-AAACACAGTTTTGACTCA-AGTGCAATGTGCTTATTTCCTGAGGTTGCTT-CTGACTAGAAATTTTGAGTGGAAAAATGAGATCTAGAGTTGAAAAT-AT----AGTAA------ i mm10.chr2 I 17 C 0 s canFam3.chr30 26811968 149 - 40214260 AAAAAGATGCCTTGA-AA-ATGATTGTG-------------------CTC--------TCTTAAGC-AAATGAGGTTATCAGTCCAAGTGAACTGTAGCTACTTTCTCAG-TTTTTTACTTGACATACATTTTGGTTGG-AAGAGGAGCTCTAGATCCACAGGT-ATTCAGGGTGATTTTTT i canFam3.chr30 I 14 I 400 s dasNov3.JH579377 1068032 134 + 2868945 ttaaaaaaatCATGA-GC-AGAATTACA-------------------TTC--------TCTTAAGCAAAATGGAGTTATCAATCC-AAGGGTATTGGGCTACCTTCTCAGATTTATTATTTACCAGAGATTTTGGATGG-AATCTGAGATCTGATGTTGCAGGT-T---------------- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=136983.000000 s hg38.chr14_KI270725v1_random 161332 13 + 172810 GTTTTTCCCTCAT s panTro5.chr1 126788595 13 + 228573443 GTTTTTCCCTCAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399629 13 - 99763055 GTTTTCCCCTCAT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545961 13 + 121039945 GCTTTTCCCTCAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198701 13 - 169600520 GTTTTTCCCTCAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876280 13 - 171882078 GTTTTTCCCTCAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949068 13 + 40200012 GTTTTTCCCTCAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394576 13 - 7633303 GTTTTTCCCTCAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191494 13 + 58131712 GTTTTTCCCTCAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585472 13 - 2620224 GTTTTTCCCTCAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412338 13 - 10629787 GTTTTTCCCTCAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994191 13 - 132174527 GCTTTTCCCTCAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794877 13 + 21366645 GCTTTTCCCTCAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310750 13 + 13033340 GCTTTTCCCTCAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392616 13 - 11604778 GCTTTTCCCTCAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219138 12 - 36342412 -TTTTTCCTCCAT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120646 9 - 182113224 ----TTCTTCTGT i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1068166 11 + 2868945 GTTTTTCTCAC-- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26812117 400 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=1061159.000000 s hg38.chr14_KI270725v1_random 161345 119 + 172810 TAATATGG-GAACAAATTCTAACATTGTAAAAGTTATGTTAATAGAGAT----TCCAAGCCCATGAACTCTAAGTGAAATGGCCATGCAATCCATGTTTTCTAGATCCATGTTGCCTA-TATCTT s panTro5.chr1 126788608 119 + 228573443 TAATATGG-GAACAAGTTCTAACCTTGTAAAATTTATGTTAATAGAGAT----TCCAAGCCCATGAACTCTAAGTGAAATGGCCATGCAATCCATGTTTTCTAGATCCATGTTGCCTA-CATCTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399642 119 - 99763055 TAATATGA-GAACAAATTCTAAAGTTGTAAAAGTTATGTTAATAGAGAT----TCCAAGCCCATAAACTCTAAGCAAGATGGCCATGCAATCCATGTTTTCTAGATCCATGTTGCCTA-TTTCTT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53545974 119 + 121039945 TAATATGG-GAACAAATTCTAACGTTGTAAAAGTTATGTTAATAGAGAT----TCCAAGCCCATGAACTCTAAGTGAGATGGCCATGCAATCCACGTTTTCTAGATCCATGTTGCCTA-TTTCTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198714 120 - 169600520 TAATATGG-GAACAAGTTCTAACGTCATAAAAGTTATGTTAATAGAGAT----CCCAAGCCTGTGAACTCTAAGTGAGATGGCCATGCAATTCATATTTTCCAGATCCATGTTGTCTCTTATCTT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876293 120 - 171882078 TAATATGG-GAACAAGTTCTAACGTCATAAAAGTTATGTTAATAGAGAT----CCCAAGCCTGTGAACTCTAAGTGAGATGGCCATGCAATTCATATTTTCCAGATCCATGTTGTCTCTTATCTT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949081 120 + 40200012 TAATATGG-AAACAAGTTCTAACGTCGTAAAAGTTATGTTAATAGAGAT----CCCAAGCCTGTGAACTCTAAGTGAGATGGCCATGCAATTCATATTTTCCAGATCCATGTTGTCTCTTATCTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394589 119 - 7633303 TAATATGG-GAACAAGTTCTAACGTCGTAAAAGTTGTGTTAATAGAGAT----CCCAAGCCTGTGAACTCTAAGTGAGATGGCCATGCAATTCATATTTTCCAGATCCATGTTGTCTC-TATCTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191507 119 + 58131712 TAATATGG-GAACAAGTTCTAACGTCGTAAAAGTTACGCTAATAGAGAT----CCCAAGCCCGTGAACTCTAAGTGAGATGGCCATGCAATTCATATTTTCCAGATCCATGTTGTCTC-TATCTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585485 119 - 2620224 TAATATGG-GAACAAGTTCTAACGTCGTAAAAGTTCTGTTAATAGAGAT----CCCAAGCCTGTGAACTCTAAGTGAGATGGCCATGCAATTCATATTTTCCAGATCCATGTTGTCTC-TATCTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412351 119 - 10629787 TAATATGG-GAATAAGTTCTAACGTCGTAAAAGTTATGTTAATAGAGAT----CCCAAGCTCGTGAACTCTAAGTGAGATGGCCACGCAATCCATGTTTTCCAGATCCATGTTGTCTA-TATCTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994204 119 - 132174527 TAATATGG-GAACAAATTCTAACGTTGTAAAAGTTACATTAATAGAGAT----TCCAAGTCCATGAACTCTAAATGAAGCAGCCATGCAATCCATGTTTGCTAGATCCGTGTTGCCTA-TATCTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10794890 119 + 21366645 TAATATGG-GAACAAATTCTAACCTTGTAAAAGTTATGTTTATAGAGAT----TCCAAGTCTGTGAACTCTAAATGAAGCAGCCATGCAATCCATGTTTGCTAGATCCATGTTGCCTA-TATCTT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310763 119 + 13033340 TAATGTGT-GAACAAATTCTAACGTTGTAAAAGTTATGTTAATAGAGAT----TCCAAGTCCGTGAACTCTAAATGAAGCAGCCATGCAATCCATGTTTGCTAGATCCCTGTTGCCTA-TATCTT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392629 119 - 11604778 TATTATGG-GAACAAATTCTAATGTTGTGAAAGTTATGTTAATAGAGAT----TCCAAGTCTATGAACTCTAAAGGAAGCAGCCATGCAATCCATGTTTGCTAGATCCATGTTGCCTA-TATCTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219150 98 - 36342412 TAATATGA-AGACAAATTGGGAC-------AAAT--------TAGAGTT---------GTTCACAAACTCTACATGATGTAAAAATGAGTTCCTTATTCTCTAGAT-CATGCTTTCTA-TATCGT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120655 96 - 182113224 TAACATAATGGACAGACTGAATTCTTGT---AGTTAGTCTAAGA---AT----TC--ACTTCATGAACTCAGAATGAGTTAG-AATG---------------ATGTCCATGTTCCTCA-TGTCTT i mm10.chr2 C 0 C 0 s canFam3.chr30 26812517 114 - 40214260 TAATAGAT-GGACTAGTTGGCACTTTTATAGAGTTATGATAATAAATATAAACTCCCAGTCCATGAACTCTAAATGAAATAGGTGTGAAATTCATATT---------CACCTTACTTA-TACCTT i canFam3.chr30 I 400 C 0 s dasNov3.JH579377 1068177 106 + 2868945 TAAATGAT-GAACAAGTTGGGCTCTTATACTAAT-----GAAGAGATAC----TCCAAGATCATGAGTTTTAAATTATGTGGGCACCAAGCCAA--------AGATTCACATTATCTA-TACCTT i dasNov3.JH579377 C 0 I 1493 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=13365.000000 s hg38.chr14_KI270725v1_random 161464 1 + 172810 T s panTro5.chr1 126788727 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399761 1 - 99763055 T i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546093 1 + 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198834 1 - 169600520 T i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876413 1 - 171882078 T i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949201 1 + 40200012 T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394708 1 - 7633303 T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191626 1 + 58131712 T i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585604 1 - 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412470 1 - 10629787 T i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994323 1 - 132174527 T i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795009 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310882 1 + 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392748 1 - 11604778 T i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219248 1 - 36342412 T i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120751 1 - 182113224 C i mm10.chr2 C 0 C 0 s canFam3.chr30 26812631 1 - 40214260 T i canFam3.chr30 C 0 I 3275 s dasNov3.JH579377 1069776 1 + 2868945 t i dasNov3.JH579377 I 1493 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=1631438.000000 s hg38.chr14_KI270725v1_random 161465 172 + 172810 AGCCTGATTTTAATATCTAACCTCCCTACTCTGATTATTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTTTTCATACCTGGTGA--AGTCATAACTTTTCTAGATATTT-----------AAATGGCATACACATGTATTATTTA---------------ATCTC s panTro5.chr1 126788728 172 + 228573443 AGCCTGATTTTAATATCTAACCTCCCTACTCTGATTGTTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAAAGTTCTTTTTAT-ATTCTTCATACCTGGTGA--AGTCATAACTTTTCTAGATATTT-----------AAATGACATACACATGTATTATTTA---------------ATCTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399762 172 - 99763055 AGCCTGATTTTAATATCTAACCTCCCTACTCTGATTGTTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGACTCTTGACAGAGTTCTTTTTAT-GTTCTTCATACCTGGTGA--AGTCATAACTTTTCTAGATATTT-----------AAATGACATACAAATTTATTATTTA---------------ATCTC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546094 172 + 121039945 AGCCTGATTTTAATATCTAACCTCCCTACTCTGATTGTTTAGGTACTACATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCATACCTGGTGA--AGTCATAACTTTTCTAGATATTT-----------AGATGACATACAAATTTATTATTTA---------------ATCTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146198835 172 - 169600520 AGCCTGATTTTAATATCTAACCTCCCTACTTTGATTGTTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCTTACCTGGTGA--AATTATAACTTTTCTAGATATTT-----------AAATGACATGCAAATTTACTATGTA---------------ATTTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876414 172 - 171882078 AGCCTGATTTTAATATCTAACCTCCCTACTTTGATTGTTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCTTACCTGGTGA--AATTATAACTTTTCTAGATATTT-----------AAATGACATGCAAATTTACTATGTA---------------ATTTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949202 168 + 40200012 AGCCTGATTTTAATATCTAACCTCCCTACT----TTGTTTAGGTACTAGATTAACTTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCTTACCTGGTGA--AATTATAACTTTTCTAGATATTT-----------AAATGACATGCAAATTTACTATGTA---------------ATTTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394709 172 - 7633303 AGCCTGATTTTAATATCTAACCTCCCTACTTTGATTGTTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCTTACCTGGTGA--AATTATAACTTTTCTAGATATTT-----------AAATGACATGCAAATTTATTGTGTA---------------ATGTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191627 172 + 58131712 AGCCTGGTTTTAATATCTAATCTCCCTACTCTGATTATTTAGGTACTCGATTAAATTC------AAAA---ATCCATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCATACCTGGTAA--GATCATAACTTTTCTAGATATTT-----------AAATGACATACAAATTTACTATGTA---------------ATCTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585605 172 - 2620224 AGCCTGATTTTAATATCTAACCTCCCTACTTTGATTGTTTAGGTACTAGATTAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-ATTCTTCTTACCTGGTGA--AATTATAACTTTTCTAGATATTT-----------AAAAGACATGCAAATTTACTATGTA---------------ATTTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412471 172 - 10629787 AGCCTGATTTTAATATCTAACCTCCCTACTCTGATTGTTTAGGTACTAGATCAAATTC------AAAA---ATCTATTTACTGTATGATTCTTGACAGAGTTCTTTTTAT-GTTCTTCATACCTGGTGA--AATCATAACTTTTCTAGATATTT-----------AAATGACATACAAATTTATTATGTA---------------ATCTC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994324 171 - 132174527 AGCCTGATTTTAGTATCTAACCTCCCTACCCTGATGGTTTAGGTACTAGATTAGATTT------GAAA---ATGTATTTATTATATGATTCTTGCCAGAGTTCTTTTTAT-ATTCTTCATACCTGGTGA--AGTCATAACTTTGTTAGATATTT-----------AAATAACATACAAATTGATTATCT----------------ATCTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795010 171 + 21366645 AGCTGGATTTTAGTATCTAACCTCCCTACCCTGATGGTTTAGGTACTAGATTAGATTT------GAAA---ATCTATTTATTATATTATTCTTGCCAGAGTTCTTTTTAT-ATTCATCATATCTGGTGA--AGTCATAACTTTTCTAGATATTT-----------AAATAACATACAAATTGATTATTT----------------ATCTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9310883 167 + 13033340 AGCCTGATTTTAGTATCTAACCTCCCTACCCTGATGGTTTAGGTACTAGATTAGATTC------AAAA---TTCTATTTATTATATGATTCTTTCCAGAGCTCTTTTTAT-ATTCTTCATACCTGGTGA--AGTCATAACTTTTCTAGATATTT-----------AAATAACATACAAAATGAT----T----------------ATCTC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392749 167 - 11604778 AGCCTGATTTTACTATCTAACCTCCCTACCCTGATGGTTTAGGTACTAGATTAGATTC------AAAA-------ATCTATTATATGATTCTTGCCAGAGTTCTTTTTAT-TTTCTTCATACCTGTTGA--AGTCATAACTTGTCTAGATATTT-----------AAATGACATACAAATTGATTATTT----------------ATCTC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219249 175 - 36342412 AAACTGATTTTAATACCTATCTTTTCTACCCAAACTATTTAAGCACCAGATTTTATTA------AAAAAATAACTATTTATTGTATGATTTGTGTCAGAGTCCTTTTTCTAATTCTTTCTACCTGATGA--AGTCATAAGTTTTCTAAGATAAA-----------AAATGACATACAACTGGATTCTTC----------------CTGCC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120752 180 - 182113224 AGGCTGATGTTCATATCTCACCATTCTCCT----------------TGGGTTGGGTTA------AAAT---ATGTATTTGTTCTCTCAGCCTCAACATGGCCCTTTTAAT-GATCTC----TCTGATGAGGAGTCAGAACATCTATGAATATGTGCATATGTATAAAGTGATATACACAGGGATCCTTCACCTTATAGATCCTTCACCTC i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1069777 174 + 2868945 AGCATGATTTTAATATGCAACATTCCTATCTGGGTTATTTGAGCACTATATTGGATTTTTTAAAAAAA---ATCTACTTATTGT-TGTTATTAGTCGGTTTCCTTTTTAT-ATCCCTCCTATATGGTGA--GGTCATAGCTTTTCCGGATATTT-----------AAATGTCATACAAATGGACTCT------------------ATCTC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5825209 1200 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=28944.000000 s hg38.chr14_KI270725v1_random 161637 2 + 172810 AT s panTro5.chr1 126788900 2 + 228573443 AT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399934 2 - 99763055 AT i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5826409 2 + 72422247 AT i ponAbe2.chrUn I 1200 I 1390 s nomLeu3.chr6 53546266 2 + 121039945 AT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199007 2 - 169600520 AT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876586 2 - 171882078 AT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949370 2 + 40200012 AT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394881 2 - 7633303 AT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191799 2 + 58131712 AT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585777 2 - 2620224 AT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412643 2 - 10629787 AT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994495 2 - 132174527 AT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795181 2 + 21366645 AT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311050 2 + 13033340 AT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392916 2 - 11604778 AT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219424 2 - 36342412 AT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120932 1 - 182113224 -T i mm10.chr2 C 0 I 6 s dasNov3.JH579377 1069951 2 + 2868945 AT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=640438.000000 s hg38.chr14_KI270725v1_random 161639 62 + 172810 GTATATATCTGATTCTGTGGTCACATTTCCCAAAGCCAGATAAATGACTGTAG----CCAGACAGA s panTro5.chr1 126788902 62 + 228573443 TTGTATACCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399936 62 - 99763055 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGAAAAATGACTGTAG----CCAGACAGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546268 62 + 121039945 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199009 62 - 169600520 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876588 62 - 171882078 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949372 62 + 40200012 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394883 62 - 7633303 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191801 62 + 58131712 GTGTGTATCTGATTCTGTGGTCACATTTCCCAAGGCCAGACAAATGACTGTAG----CAGGACAGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585779 62 - 2620224 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412645 62 - 10629787 GTGTATATCTGATTCTGTGGTCACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994497 62 - 132174527 GTCTCTATCTGGTTCTGTGGTTACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795183 62 + 21366645 GTCTATATCTGGTTCTGTGGTTATATTTCCCAAGGCCAGAAAAATGACTGTAG----CCAGACAGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311052 62 + 13033340 GTCTATATCTGGTTCTATGGTTATATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392918 62 - 11604778 GTCTATATCTGGTTCTGTGGTTACATTTCCCAAGGCCAGATAAATGACTGTAG----CCAGACAGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219426 48 - 36342412 GTCTAAATCTAGCTCTGTGCTCACAGTTCCCAAGGCCAAATCAG-GACT----------------- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58120939 64 - 182113224 GTCTCTACCC-ACACTGTGGCCATGGTGCACAAGG-CAGAATATTGGCTTTAGTCTTCCAAACAGA i mm10.chr2 I 6 I 55 s dasNov3.JH579377 1069953 62 + 2868945 GTCGATGTCCAGCTCAGTGCTCACAGTTTCTAAGGCTGGAGTAATGACTGAAA----CCAGACTGC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=429687.000000 s hg38.chr14_KI270725v1_random 161701 42 + 172810 TGTAGGGCTAGGTGTAAAAGGAGATATTCCCACAGATTATAT s panTro5.chr1 126788964 42 + 228573443 TGTAGGGCTAGGTGTAAAAAGAGATATTCCCACAGATTATAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55399998 42 - 99763055 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATAT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546330 42 + 121039945 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199071 42 - 169600520 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876650 42 - 171882078 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATGT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949434 42 + 40200012 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATGT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394945 42 - 7633303 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191863 42 + 58131712 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585841 42 - 2620224 TGTAGGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATGT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412707 42 - 10629787 TGTAGGGCTGGGTGTAAAAAGAGATGTTCCCACAGATTATGT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994559 42 - 132174527 TGTAGGGCTAGGTGTAGAAAGAGATGTTCCCCCAGATTATAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795245 42 + 21366645 TGTAGGGCTAGGTATAAAAAGAGATGTTCCCACAGATTATAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311114 42 + 13033340 TGTAAGGCTAGGTGTAAAAAGAGATGTTCCCACAGATTATAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6392980 42 - 11604778 TGTAGGGCTTGGTGTAAAAGGAGATGTTCCCACAGATTATAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219474 32 - 36342412 ------GCTGGTTGTGAAGAGAGATATTCCCACAGATC---- i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1070015 31 + 2868945 -----------CTATAAAAAGAGATGTACCCAGAGGTTAGAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=72690.000000 s hg38.chr14_KI270725v1_random 161743 7 + 172810 AGTTGCt s panTro5.chr1 126789006 7 + 228573443 AGTTGCt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400040 7 - 99763055 AGTTGCt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546372 7 + 121039945 AGTTGCt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199113 7 - 169600520 AGTTGCt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876692 7 - 171882078 AGTTGCt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949476 7 + 40200012 AGTTGCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394987 7 - 7633303 AGTTGCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191905 7 + 58131712 AGTTGCt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585883 7 - 2620224 AGTTGCt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412749 7 - 10629787 AGTTGTt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994601 7 - 132174527 AGTTGCt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795287 7 + 21366645 AGTTGCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311156 7 + 13033340 AGTTGCt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6393022 7 - 11604778 AGTTGCt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219506 6 - 36342412 -GTTGCA i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e dasNov3.JH579377 1070046 0 + 2868945 C e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=1499071.000000 s hg38.chr14_KI270725v1_random 161750 194 + 172810 gtgtagagaaaactctctc--tgtttttcctctagtctcacgccacaaagatcaatcagcaacagaaaagacttctgtgaccaaatgtgtggg-ttttttcctccatacatacaccaaggagtggacaccagctgagtgtcctctaattcagttctgacactacactatctacctggagatagtgtcaggtctcaca s panTro5.chr1 126789013 194 + 228573443 gtgtagagaaaactctctc--tgtttttcctttagtctcacaccacaaatatcaatcagcaacacagaagacttctgtgactaaatgtgtcgg-tttattcctccatacatacaccaaggagcagacaccagctgagtgtcctctaattcagttctgacactacactgtgtacctggagatagtgtcagatctcaca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400047 196 - 99763055 gtgtagagaaaactctctctgtgtttttcctctagtctcacaccacaaagatcaatcagcaacacagaagacttctgtgaccaaatgtgcagg-ttttttcctccatacatacaccaaggagcagacaccagctgagtggcctctaattcagttcggacactacactgtctacctggaggtagtgtcacatctcaca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546379 192 + 121039945 gtgtagagaaaactctg----tgtttttcctctagtctcacaccacaaagatcaatcagcaacacagaagacttctgtgaccaaatgtgtggg-ttttttcctccatacatacaccaaggagcagacaccagctgagtgtcctctaattcagttctgacactacactgtctacctggagatagtgtcacatctcaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199120 186 - 169600520 gtgtagagaaaactctg----tgtttttcctctagtctcacaccacaaagattaatcagcaacacagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaagcagtagacaccagctgagtgtcctctaattcagttctgacactacaccgtctacctggagatag------atctcaca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147876699 186 - 171882078 gtgtagagaaaactctg----tgtttttcctctagtctcacaccacaaagattaatcagcaacacagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaagcagtagacaccagctgagtgtcctctaattcagttctgacactacaccgtctacctggagatag------atctcaca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26949483 186 + 40200012 GTGCAgagaaaactctg----tgtttttcctctagtctcacaccacaaagattaatcagcaacacagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaagcagtagacaccagctgagggtcctctaattcagttctgacactacaccgtctacctggagatag------atctcaca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4394994 184 - 7633303 GTGCAGAGAaaactc------tgtttttcctctagtctcacaccacaaagattaatcagcaacgcagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaaacagtagacaccagctgagtgtcctctaattcagttctgacactacaccgtctacctggagatag------atctcaca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36191912 186 + 58131712 gtgtagagaaaactctg----tgttttgcctctagtctcacaccacaaagatcaatcagcaacacagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaagcagcagacaccagctgagcgtcctctaattcagttctgaccctacaccatctacctggagatag------atctcaca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2585890 186 - 2620224 gtgtagagaaaactctg----tgtttttcctctagtctcacaccacaaagattaatcagcaacacagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaagcagtagacaccagctgagtgtcctctaattcagttctgacactataccgtctacctggagatag------atctcaca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8412756 186 - 10629787 gtgtagagaaaactctg----tgtttttcctctagtctcacaccacaaagatcaatcagcaacacagaagacttctgtgaccaaatgtgtagg-ttttttcttccatacatacaccaagcagcagacaccagctgagtgtcctctaattcagttctgacactacaccgtctacctggagatag------atctcaca i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107994608 194 - 132174527 gtgtagagaaaacgctctctgtgatattcctctagtctcacaccacagcaattgatcggtaacac---agacttctgtgaccaaatatgtgggttttttttctccatacatataccaagcagcagacatcagctgagtgtcctctaatttagttctgacactacactttctacctggagatagtgtcagattccaca i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10795294 189 + 21366645 GTGCAgagaaaactctctctgtgatattcctctagtctcacaccacagcaattgattggtaacac---agacttctgtgaccaaatgtgtagg-----tttctccatatatataccaagctacagacatcagctgagtgtcctctaattcagttctgatgctacactttctacctggagatagtgtcagattccaca i saiBol1.JH378136 C 0 I 354 s cebCap1.NW_016107324v1 9311163 193 + 13033340 gtgtagagaaaactatctctgtgatattcctctagtctcacaccgtaacaatcgattggtaacac---agacttctgcgaccaaatgtgtggg-tttttttctccatacatataccaagcagcagacatcagctgagtgtcctctaattcagttctgacactacactttctacctggagatagtgtcagattccaca i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6393029 192 - 11604778 gtgtagagaaaactctctctgtgatattcctctagtctcacagcacaacaattgatcagtaacac---agatttctgtgaccaaatatgtggg--ttttttctccatacatatatcaagcagcagacatcagctgagtgtcctctaattcagttatgacactacactttctacctggagatagtgtcagattccaca i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e dasNov3.JH579377 1070046 0 + 2868945 C e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36219512 0 - 36342412 C a score=9731.000000 s hg38.chr14_KI270725v1_random 161944 2 + 172810 tg s panTro5.chr1 126789207 2 + 228573443 gg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400243 2 - 99763055 gg i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546571 2 + 121039945 gg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199306 2 - 169600520 gg i rheMac8.chr7 C 0 I 8 s macFas5.chr7 147876885 2 - 171882078 gg i macFas5.chr7 C 0 I 8 s macNem1.NW_012010577v1 26949669 2 + 40200012 gg i macNem1.NW_012010577v1 C 0 I 8 s cerAty1.NW_012000887v1 4395178 2 - 7633303 gg i cerAty1.NW_012000887v1 C 0 I 8 s chlSab2.chr26 36192098 2 + 58131712 gg i chlSab2.chr26 C 0 I 8 s manLeu1.NW_012108674v1 2586076 2 - 2620224 gg i manLeu1.NW_012108674v1 C 0 I 8 s colAng1.NW_012121598v1 8412942 2 - 10629787 gg i colAng1.NW_012121598v1 C 0 I 8 s calJac3.chr10 107994802 2 - 132174527 ag i calJac3.chr10 C 0 I 8 s cebCap1.NW_016107324v1 9311356 2 + 13033340 aa i cebCap1.NW_016107324v1 C 0 I 8 s aotNan1.NW_018501505v1 6393221 2 - 11604778 ag i aotNan1.NW_018501505v1 C 0 I 8 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e dasNov3.JH579377 1070046 0 + 2868945 C e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10795483 354 + 21366645 I e otoGar3.GL873530 36219512 0 - 36342412 C a score=4888317.000000 s hg38.chr14_KI270725v1_random 161946 571 + 172810 tcagtccccaagactgcccaccctcaaactaccagccagaagtccaggcctct-gaacttctgacctgctggcttcgagttggc-ttctcaggaccccctctttgtgtttgattaatttgttggagtggctcacggaactcagggaaacacttacatttcctggtgttttataaaggacattgcaaaggatatagatgaag-gacacttagagcaattca-taggggaagggagcagagcttccatgccatccctgggtgggccaccctacaggaacatccatgtgttcaactacccagaagctcactgaacactgtcctcctggatttttatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcttgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaaggtgagaggcctgctcctgaggcctaatacacccaatattataacaaaagactgtaacaagtgctaggggagttataagccaggaactgtggatgaaaacc--------------------------------------------aatatatatcataacaccac s panTro5.chr1 126789209 572 + 228573443 tcagtccccaagactgcccaccctcaatctaccagccacaagtccaggactct-gaacttctgacctattggcttcaagttggg-ttctcatgaccccttctttgggtttgattaatttgttggagtggctcacagaactcagggaaacacttacatttcctggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgca-tgggggaagggagctgagcttccatgccatccctgggttggccaccctccaggaacatccatgtgttcaactacccagaaactcattgaaccctgtcctcctggattttcatggaagtttcatgatatcagcattcctccctccagggtatagggtgggactctctgctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaagccatgaggaggtgagaggcctgctcctgaggcctaacacacccaatattataacaaaagactgtaataagtgctaggcgagttataagccaggaactgtggatgaaaacc--------------------------------------------aatatatatcataacaccac i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400245 563 - 99763055 tcagtccccaagactgcccaccctcaacctaccagccacaagtccaggcctct-gaacttctgacctactggcttcaagttggg-ttctcatgaccccctctttgggtttgattaatttgttggagtggctcacagaactcagggaaacactga---------gtgtattataaaggatattgcaaaggatatagacaaagagacacttagagcaatgcg-tggaggaagggagcagagcttccatgccatccctgggcgggccaccatccaggaacatccatgtgttcagctatgcagaagctcactgaacactgtcctcctggattttcatggaagttgcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaaggtgagaggcctgatcctaaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaactgtggatgaaaacc--------------------------------------------aatatatatcataacaccac i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53546573 572 + 121039945 tcagtccccaagactgcccaccctcaacctaccagccacaagtccaggcctct-gaacttctgacctactggcttcaagttgggattctcatgacaccctctttg-gtttgattaatttgttggagtagcccacagaactcagggaaacacttacatttactgatgtattataaaggatattgcaaaggatatagacgaagagacacttagagctatgca-tggaggaagggagcagagcttccatgccatccctgggcgggccaccctctaggaacatccatgtgttcagctatccagaagcgcactgaaccctgtcctcctggattttcatggaagtttcatgatatgcgcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagaccggcaatcagaaaggcaggaacataaaaatgaaaaaaggccatgagaaggtgagaggcctgctcctgaggcctgacacacctaatattaaaacaaaagactgtaacaagggctaggggagttataagccaggaactgtggatggaaacc--------------------------------------------aatatatatcataacaccac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199316 573 - 169600520 tcagttcccaagactgcccaccctcaacctaccagccgcaagtccaggcctct-gaacttctgacctactggcttcaagttggggttctcatgaccccctctttggatttgattaatttgttggagtggctcacagaactcagagaaacacttacatttactggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgcg-tggggaaagggagcagagtttccatgccatccctgggcgggccaccctcccagaacatccatgtgttcggctatccagaatctcatggaaccctgtcctcctggatattcatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaagatgaggggtctgctcctgaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaaatgtggatgaaaacc--------------------------------------------aatatatatcataacgccac i rheMac8.chr7 I 8 C 0 s macFas5.chr7 147876895 573 - 171882078 tcagttcccaagactgcccaccctcaacctaccagccacaagtccaggcctct-gaacttctgacctactggcttcaagttggggttctcatgaccccctctttggatttgattaatttgttggagtggctcacagaactcagagaaacacttacatttactggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgcg-tggggaaagggagcagagtttccatgccatccctgggcgggccaccctcccagaacatccatgtgttcggctatccagaatctcatggtaccctgtcctcctggatattcatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaagatgaggggcctgctcctgaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaaatgtggatgaaaacc--------------------------------------------aatatatatcataacgccac i macFas5.chr7 I 8 C 0 s macNem1.NW_012010577v1 26949679 573 + 40200012 tcagttcccaagactgcccaccctcaacctaccagccacaagtccaggcctct-gaacttctgacctactggcttcaagttggggttctcatgaccccctctttggatttgattaatttgttggagtggctcacagaactcagagaaacacttacatttactggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgcg-tgggaaaagggagcagagtttccatgccatccctgggcgggccaccctcccagaacatccatgtgttcggctatccagaatctcatggaaccctgtcctcctggatattcatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaagatgaggggcctgctcctgaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaaatgtggatgaaaacc--------------------------------------------aatatatatcataacgccac i macNem1.NW_012010577v1 I 8 C 0 s cerAty1.NW_012000887v1 4395188 573 - 7633303 tcagttcccaagactgcccaccctcaacctaccagccacaagtccaggcctct-gaacttctgacctactggcttcaagttggggttctcacggccccctctttggatttgattaatttgttggagtggctcacagaactcagagaaacacttacatttactggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgcg-tggggaaagggagcagagcttccatgccatccctgggcgggccaccctcccagaacatccatgtgttcggctatccagaatctcactgaaccctgtcctcctggatattcatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagacccacaaccagaaaagcaggaacataaaaatgaaaaaaggccatgagaagatgaggggcctgctcctgaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaaacgtggatgaaaacc--------------------------------------------aatatatatcataacaccac i cerAty1.NW_012000887v1 I 8 C 0 s chlSab2.chr26 36192108 573 + 58131712 tcagttcccaagactgcccaccctcaacctaccagccacaagtccaggcctct-gaacttctgatctactggcttcaagttggggttctcatgaccccgtctttggatttgattaatttgttggagtggctcacagaactcagagaaacacttacatttactggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgcg-tggggaaagggagcagagcttccatgccatccctgggcgggccaccctcccggaacatccatgtgttcggctatccagaatctcattgaaccctgccctcctgggttttcatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaagatgaggggcctgctcctgaggcctaacacacccgatattataacaaaagactgtaacaagggctaggggagttataagccaggaaatgtggatgaaaacc--------------------------------------------aatatatatcataacaccac i chlSab2.chr26 I 8 C 0 s manLeu1.NW_012108674v1 2586086 573 - 2620224 tcagttcccaagactgcccaccctcaacctaccagccacaagtccagacctct-gaacttctgacctactggcttcaagttggggttctcatgaccccctctttggatttgattaatttgttggagtggctcacagaactcagagaaacacttacatttactggtgtattataaaggatattgcaaaggatatagatgaagagacacttagagcaatgcg-tggggaaagggagcagagcttccatgccatccctgggcgggccaccctcccagaacatccatgtgttcggctatccagaatctcatggaaccctgtcctcctggatagtcacggaagtttcatGATATcagcattcctccctccagggtatagggtgggactctctcctgagatggtcttaaggcccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaagatgaggggcctgctcctgaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaaacgtggatgaaaacc--------------------------------------------aatatatatcgtaacaccaG i manLeu1.NW_012108674v1 I 8 C 0 s colAng1.NW_012121598v1 8412952 568 - 10629787 tcagttcccaagactgcccaccctcaacctaccagccacaagttcaggcctct-gaacttctgacctactggcttcaagttggggttctcatgaccccctctttggatttgattaatttgttgcagtggctcacagaactcagagaaac----acatttactggtgtattataaaggatattgcaaaggatatagatgaagagatacttagagcaatgcg-tggggaaaggaagcagagcttccatgccatccctgggcgggccaccctctcggaacatccatgtgttcagctatccagaatctcattgaaccctgtcctcctgcattttcatggaagtttcatGATATcagcattcctccctccagggtatagggtgggactc-atcctgagatggtcttaagacccacaaccagaaaggcaggaacataaaaatgaaaaaaggccatgagaagatgaggggcctgctcctgaggcctaacacacccaatattataacaaaagactgtaacaagggctaggggagttataagccaggaaatgtggatgaaaacc--------------------------------------------aatatatatcataacaccac i colAng1.NW_012121598v1 I 8 C 0 s calJac3.chr10 107994812 617 - 132174527 tcagtccccaagactgcccaccctcaaccacccagtcacaactctaggcctcgtgaa-ttctgacctactggctttaagttggggttctcatgaccccctctttgggtttgattaatttgttggagtggctcacagaatgcagggaaacatttaaatttac-ggtttattataaaggatattgacaaggatatagacaaagagacatctagagcaatgtgatggggaaggagagcagagctttcatgccattcctgggtgggccaccctccaggaacttccatgtgttcagctatccagaagctcactgaaccctgtcctcctggatttttatggaagtttgatGACATcagcattcctccctccagggtatagggtgggactctcttctgagatggtcttaagacccacaaccagaaaggcacaaacataataatgaaaggaggccatgagaaagtgagaggactgctcgggaggcctaacacacccaacattatagcaaaaatctgtagcaagggctatgagagttataagccaggaactgtggaggaaaacatatctctatctatctatctatctatctacctatctatctatctatctatatctcaaaacaccac i calJac3.chr10 I 8 C 0 s saiBol1.JH378136 10795837 589 + 21366645 tcagttcccaagactgcccaccctcaacctcccagtcataactccaggcctctggaacttccgacttactggcttcaagttggggttctcatgaccccctctttgggtttgattaatttgttggagtggctcacagaactcagggaaacatttaaatttactggtttattataaaggatattgccaagggtatagacaaagagacatctagagcaatgtgaaggggaaggggagcagagcttccatgccattcctgcatgggccaccctccagggacttccatgtgttcagctatccagaagctcactgaaccctgtcctcctggttttttatggaaatttgatgacatcagcattccttcctccagggtatagggtgggactctcttctgagatggtcttaagacccacaaccagaaaggcagaaacataagaatgaaaggaggccacgagaaagtgagaggtctgctcctgaggcctaacacacccaacgttatagcaaaagactgtagcaagggctatgagagttataagccaggaactgtggatgaaaaca------------------------------tatatatatatatatatatatctcataacaccac i saiBol1.JH378136 I 354 C 0 s cebCap1.NW_016107324v1 9311366 589 + 13033340 tcagtccccaagactgcccaccctcaacctcccagtcacaactccaggcctctggaacttctgacttactggcttcaggttggagttctcatgaccccctctttgggtttgattaatttgttggagtggctcacagaactcagggaaacatttaaatttactggtttattataaaggatattgccaaggatatagacaaagagacatctagagcaatgtgagggggaaggggaacagagcttccatgccatttctgggtgggtcaccctccaggaacttccatgtgttcagctatccagaagctcactgaaccctgtccttctggatttttatggaagtttgatgacatcagcattcctccctccggggtatagggtgggactctcttctgggatggtcttaagacccacaaccagaatggcagaagcataagaatgaaaggaggccatgagaaagtgagaggcctgctcctgaggcctaacacacccaacagtatagcaaaagactgtagcaagggctatgagagttataagccaggaactgtggatgaaaaca------------------------------tatatatatatatatatatatatcataacaccac i cebCap1.NW_016107324v1 I 8 C 0 s aotNan1.NW_018501505v1 6393231 575 - 11604778 ttagtccccaagactgcccaccctcaacctcccagtcacaactccaggactctgaaacttctgacctactggcttcaagttggggttctcatgaccccctctttgggtttgattaatttgttggagtggctcacagaactcagggaaacatttaaatttactggtttattataaaggatattgccaaggatatagacaaagagacatctagagcaatgtaagagggaaggggagcagagcttccatgccattcctgggtgggccaccctccaggaacttccatgtgttcagctatccagaagctcactgaaccctatcctcctggatttttatggaagtttgatGACATcagcattcttccctccagggtatagggtgggactctcttctgagatggtcttaagacccacaaccagaaaggcagaaacataagaatgaaaggagtccatgagaaagtgagaggcctgctcctgaggcctaacacacccaacattatagcaaaagactgtagcaagggctatgagagttataagccaggaactgtggatgaaaaca--------------------------------------------tatatatatcataacaccac i aotNan1.NW_018501505v1 I 8 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e dasNov3.JH579377 1070046 0 + 2868945 C e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36219512 0 - 36342412 C a score=22920.000000 s hg38.chr14_KI270725v1_random 162517 2 + 172810 aG s panTro5.chr1 126789781 2 + 228573443 aG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400808 2 - 99763055 aG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547145 2 + 121039945 aG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199889 2 - 169600520 aG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877468 2 - 171882078 aG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950252 2 + 40200012 aG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4395761 2 - 7633303 aG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192681 2 + 58131712 aG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586659 2 - 2620224 AG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413520 2 - 10629787 aG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995429 2 - 132174527 aG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796426 2 + 21366645 aG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311955 2 + 13033340 aG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6393806 2 - 11604778 aG i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1070046 2 + 2868945 AG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36219512 0 - 36342412 C a score=212417.000000 s hg38.chr14_KI270725v1_random 162519 21 + 172810 TTGCTGAGAAAATATTCATGG s panTro5.chr1 126789783 21 + 228573443 TTGCTGAGAAAATATTCATGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400810 21 - 99763055 TTGCTAAGAAAATATTCTTGG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547147 21 + 121039945 TTGCTGAGAAAATATTCATGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199891 21 - 169600520 TTGCTGAGAAAATATTCGTGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877470 21 - 171882078 TTGCTGAGAAAATATTCGTGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950254 21 + 40200012 TTGCTGAGAAAATATTCGTGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4395763 21 - 7633303 TTGCTGAGAAAATATTCGTGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192683 21 + 58131712 TTGCTGAGAAAATATTCGTGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586661 21 - 2620224 TTGCTGAGAAAATATTCGTGG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413522 21 - 10629787 TTGTTAAGAAAATATTCATGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995431 21 - 132174527 TTGCTGAGAAAATATTCAGAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796428 21 + 21366645 TTGCTGAGAAAATATTCAGGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311957 21 + 13033340 TTGCTGAGAAAATATTCAGGG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6393808 21 - 11604778 TTGCTGAGAAAAGATTCAGGG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219512 21 - 36342412 TTGCTGAGAAAATATTTAAGG i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1070048 21 + 2868945 TTCCTGAGGAAAAGGTCAAGT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121003 55 - 182113224 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=1730664.000000 s hg38.chr14_KI270725v1_random 162540 185 + 172810 AAAATAGACCTAAATTGA-TACTGCCTATTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGAAAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTGTGCC-TGTGTAACATATATTTCATGT----T---AGAGAAAAGCAACAAAGACAATATAAT s panTro5.chr1 126789804 185 + 228573443 AAAATACACCTAAATTGA-TACTGCCTAATGACATAATTTACTTTACTGATCTTTTCCTTCACCACTTTAATAAATA----GCTCAGACAATAATGAGTCTCATTCAAAGATAATAATAGAAAAGATACCAGCACTGTGCC-TGTGTAACATATGTTTCATGT----T---AGAGAAAAGCAACAAAGACAATATAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55400831 185 - 99763055 AAAACAGATCTAAATTGA-TACTGCCTATTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAAAAGAAAAGATACCAGCACTGTGCC-TGTGTAACATATATTTGATGT----T---AGAGAAAAGCAACAAAGACAATATAAC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547168 185 + 121039945 AAAATAGACCTAAATTGA-TACTGCCTATTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAACA----GCTCAGACAATAACGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTGTGCC-TGTGTAACATATATTTGATGT----T---AGAGAAAACCAACAAAGACAATATAAC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146199912 172 - 169600520 AAAACAGACCTAAATTGA-TA----CTGTTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGC----T---AGAGAAAAGCAACAAAGACAATATAAC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877491 172 - 171882078 AAAACAGACCTAAATTGA-TA----CTGTTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGC----T---AGAGAAAAGCAACAAAGACAATATAAC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950275 172 + 40200012 AAAATAGACCTAAATTGA-TA----CTGTTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGC----T---AGAGAAAAGCAACAAAGACAATATAAC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4395784 172 - 7633303 AAAACAGACCTAAATTGA-TA----CTGTTGACATAATTTACTTTAGTGATCTTTTCCTTTACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGC----T---AGAGAAAAGCAACAAAGACAATATAAC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192704 176 + 58131712 AAAACAGACCTAAATTGA-TACTGTCTGTTGACATAATTTACTTTACTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGC----T---AGAGAAAAGCAACAAAGACAATATAAC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586682 172 - 2620224 AAAACAGACCTAAATTGA-TA----CTGTTGACATAATTTACTTTGCTGATCTTTTCCTTCACCATTTTAATAAATA----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGC----T---AGAGAAAAGCAACAAAGACAATATAAC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413543 170 - 10629787 -AAACAGACCTAAATTGA-TACTGTCTGTTGACATAATTTAC-----TGATCTTTTCCTTCACCATTTTAATAAATG----GCTCAGACAATAATGAGTCCCATTCAAAGATAATAATAGAAAAGATACCAGCACTG----------AACATATATTTCATGT----T---AGAGAAAAGCAACAAAGACAATATAAC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995452 185 - 132174527 AAAATAGACCTAAATTGT-TACTACCTATTGACATAATTTACGTTACTAATCTCTTCCTTCACCATTTTAATATATA----ACTCAGACAATAATGAGTCTTATTCAAGGATAATAATAAAAAAGATACCATCACTGTGAC-TGTGTAACATATATTTCATGT----T---AGAGAAAAACAAAAAAGACAATATGAC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796449 185 + 21366645 AAAATAGACCTAAATTGT-TATTACCTATTGACATAATTTACGTTACTAATCTCTTCCTTCACCATTTTAATGTATA----GCTCAGACAATAATGAGTCTCATTCAAGGATAATAATAAAAAAGATACCATCACTGTGAC-TGTGTAACATATATTTCATGT----T---AGAGAAAAACAAAAAAGACAATATGAC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9311978 185 + 13033340 AAAATAGACCTAAATTGT-TACTACCTATTGACATAATTTACGTTACTAATCTCTTCCTTCACCATTTTAATATATA----GCTCAGACAATAATGAGTCTCATTCAAGGATAATAATAAAAAAGATACCATCACTGTGAC-TGTGTAACATATATTTCATGT----T---AGAGAAAAACAAAAAAGACAATATGAC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6393829 185 - 11604778 AAAATGGACCTAAATTGT-TACTACCTATTGACATAATTTACGTGACTAATCTCTTCCTTCACCATTTTAATATATA----GCTCAGACAGTAATGAGTCTCATTCAAGGATAATAATAAAAAAGATACCATCACTGTGAC-TGTGTAACATATATTTCATGT----T---AGAGAAAAACAAAAAAGACAATATGAC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219533 175 - 36342412 AAAACAGA-CTGAATTGA-TGTTGCCTATTGATATAATTTAC-----TGATTTCCCGCTTTACAATTTTAATCAATA----GCTCAGACAG------GCTCTATTCAAACATAATAATC-ACAAGATACCACAATTATGCCTTGTGTAACGTA--TTTCGTGTTAAAT---AGGAAAAATCAATAAGGACAATATGAG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58121058 182 - 182113224 AAAACAG-CCTGAATTAACTGTCAATTGTTAGCACAATTCACTCTGCTGATGTTCTA-TTTGCTGTTTTAACAAACA----ACTCAGATAAAAACATACCTCATACAGAAATAGTA----AAATAATACCCTCTCTG--CC-CATGTGGAATATACTTCATGTTAAAT---AGTGGGAAACAACAAGGGCGATATGAC i mm10.chr2 I 55 C 0 s dasNov3.JH579377 1070069 185 + 2868945 AAAATAGACCT-AATTGA-TGCCATCTTCTGACATAATTTACTGTA------TCCTCCTCTACCATTTTAACAAAGAGCAGGCCTAAACAAAAAAGGGCTCCATTTGAAGATAATAATCTAAAAGTTGCCTCCATTTTACC-TATGCAAAATATATTTCTAGC----TGACAGAAAAAAGCAACAAGTACAATGTGAC i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e canFam3.chr30 26812632 3275 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=693600.000000 s hg38.chr14_KI270725v1_random 162725 74 + 172810 ATTAAAAGACAGAAAAAAATTACATGCCACATTGACTATCATTGAATCACAAAGTGAATACAAATTTTTAATGC s panTro5.chr1 126789989 74 + 228573443 ATTAAAAGACAGAAAAAAATTACATGCCACATTGACTATCATTGAATCACAAAGTGAATACAAATTTATAATGC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401016 74 - 99763055 ATTAAAAGACAGAAAAAAATTACATGCCACATTGACTATCATTGAGTCACAAAGTGAATACAAATTTTTAATGC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547353 73 + 121039945 ATTAAAAGACAG-AAAATATTACATGCCACATTGACTATCATTGAGTCACAAAGTGAATACAAATTTTTAATGC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200084 74 - 169600520 ATTAAAAGACAGAAGAAAATTACGTGCCACACTGACTATCATTGAGTCACAAAGTGAACACAAATTTTTAATGC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877663 74 - 171882078 ATTAAAAGACAGAAGAAAATTACGTGCCACACTGACTATCATTGAGTCACAAAGTGAACACAAATTTTTAATGC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950447 74 + 40200012 ATTAAAAGACAGAAGAAAATTACGTGCCACACTGACTATCATTGAGTCACAAAATGAACACAAATTTTTAATGC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4395956 74 - 7633303 ATTAAAAGACAGAAGAAAATTACATGCCACACTGACTATCATTGAGTCACAAAGTGAACACAAATTTTTAATGC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192880 74 + 58131712 ATTAAAAGACAGAAGAAAATTACATGCCACACTGACTATCATTGAGTCACAAAGTGAACCCAAATTTTTAATGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586854 74 - 2620224 ATTAAAAGACAGAAGAAAATTACATGCCACACTGACTATCATTGAGTCACAAAGTGAACACAAATTTTTAATGC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413713 73 - 10629787 ATTAAAAGAT-GAAGAAAATTACATGCCACACTGACTATCATTGAGTCACAAAGTGAACACAAATTTTTAATGC i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995637 74 - 132174527 ATTAAAAAACAGAAAAAAATTACATGCTACATTGACTATCATTGAGTCATAAAGTGAATAAAGAATTTTAATGC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796634 73 + 21366645 ATTAAAAGACCG-AAAAACTTACATGCTACATTGACTATCACTGAGTCATAAAGTGAATAAAAAATTTTAATGC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312163 74 + 13033340 ATTAAAAGACAGAAAAAAATTACATGCTACATTGACTATCACTGAGTCATAAAGTGAATAAAAAAATTTAATGC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394014 73 - 11604778 ATTAAAAGACAG-AAAAAATTACATGCTACATTGACTATCATTGAGTCATAAAGTGAACAAAAAATTTTAATGC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219708 72 - 36342412 AATAATAGATGG-ACAAGAATACATGTCAAATTAATTATCATTGAGTCAAAAAGTGAATAAAAA-TTGAAATGA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58121240 72 - 182113224 AAGAAAAGATAG-GACAGAGAATATACCGCATCAATTAGCTTTGAGTTACAAAGGTAACA-GCATCTGTAAAAC i mm10.chr2 C 0 C 0 s canFam3.chr30 26815907 66 - 40214260 ataaaaaaaaaagaaaaaaaaaTATGC------AAATAGCCAAAAACCACAAAAAAACAAAAAACAAAAAAC-- i canFam3.chr30 I 3275 C 0 s dasNov3.JH579377 1070254 70 + 2868945 --AATAAGGTAG-ACAAGAATACATACCACATTCATTGCC-TTAAGCCACAAAGCTAGAGAAAATTTGGAATAT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 859563 3517 - 1089701 I e eulMac1.LGHX01000819v1 851294 3517 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=17290.000000 s hg38.chr14_KI270725v1_random 162799 1 + 172810 A s panTro5.chr1 126790063 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401090 1 - 99763055 A i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547426 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200158 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877737 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950521 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396030 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192954 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586928 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413786 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995711 1 - 132174527 A i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796707 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312237 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394087 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s eulMac1.LGHX01000819v1 854811 1 - 1078805 A i eulMac1.LGHX01000819v1 I 3517 I 20 s eulFla1.LGHW01000825v1 863080 1 - 1089701 A i eulFla1.LGHW01000825v1 I 3517 I 20 s otoGar3.GL873530 36219780 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26815973 1 - 40214260 A i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1070324 1 + 2868945 A i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121312 0 - 182113224 C e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=220075.000000 s hg38.chr14_KI270725v1_random 162800 20 + 172810 TTGTTTCATTAAATCAAACT s panTro5.chr1 126790064 20 + 228573443 TTGTTTCATTAAATCAAACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401091 18 - 99763055 --GTTTCATTAAATCAAACT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547427 20 + 121039945 TTGTTTCATTAAATCAAACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200159 20 - 169600520 TTATTTCATTAAATCAAACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877738 20 - 171882078 TTATTTCATTAAATCAAACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950522 20 + 40200012 TTATTTCATTAAATCAAACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396031 20 - 7633303 TTATTTCATTAAATCAAGCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192955 20 + 58131712 TTATTTCATTAAATCAAACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586929 20 - 2620224 TTATTTCATTAAATCAAATT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413787 20 - 10629787 TTATTTCATTAAATCAAACT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995712 20 - 132174527 TCGTTCCATTAAATCAAACT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796708 20 + 21366645 TCATTCCATTAAATCAAACT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312238 20 + 13033340 TCGTTCCATTAAATCAAACT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394088 20 - 11604778 TCGTTTCATTAAATCAAACT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219781 20 - 36342412 CGGTTTCATCAAATCAAAAC i otoGar3.GL873530 C 0 I 3 s mm10.chr2 58121312 18 - 182113224 CTGTTCCATTAAATCAAA-- i mm10.chr2 C 0 C 0 s canFam3.chr30 26815974 20 - 40214260 TTATCCCTTAAAATCAAAAC i canFam3.chr30 C 0 I 7 s dasNov3.JH579377 1070325 18 + 2868945 TAGTCTCATAAAACCAAA-- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863081 20 - 1089701 I e eulMac1.LGHX01000819v1 854812 20 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=41916.000000 s hg38.chr14_KI270725v1_random 162820 5 + 172810 CCCCT s panTro5.chr1 126790084 5 + 228573443 CCCCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401109 5 - 99763055 CCCCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547447 5 + 121039945 CCCCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200179 5 - 169600520 CCCCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877758 5 - 171882078 CCCCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950542 5 + 40200012 CCCCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396051 5 - 7633303 CCCCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192975 5 + 58131712 CCCCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586949 5 - 2620224 CCCCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413807 5 - 10629787 TCCCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995732 5 - 132174527 CTCCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796728 5 + 21366645 CCCCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312258 5 + 13033340 CCCCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394108 5 - 11604778 CCCCT i aotNan1.NW_018501505v1 C 0 C 0 s eulMac1.LGHX01000819v1 854832 5 - 1078805 AACAT i eulMac1.LGHX01000819v1 I 20 I 13125 s eulFla1.LGHW01000825v1 863101 5 - 1089701 AACAT i eulFla1.LGHW01000825v1 I 20 I 13338 s otoGar3.GL873530 36219804 5 - 36342412 ATCTT i otoGar3.GL873530 I 3 C 0 s canFam3.chr30 26816001 5 - 40214260 AAACT i canFam3.chr30 I 7 C 0 e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121330 0 - 182113224 C e dasNov3.JH579377 1070343 0 + 2868945 C e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=2106576.000000 s hg38.chr14_KI270725v1_random 162825 205 + 172810 TCCTGCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAAAGCAGATATAAGATAAATGCAATATATGTAGTGTGAGCTTAGGGAAAGATAAAAGGGAAAA----TATCTTTTATCTGAGAAATATATACCACACGAGAAACAGCAGAAATGAAGAATAGA-TATTTTCAAAATTTACTCAAATAAATGG s panTro5.chr1 126790089 205 + 228573443 TCCCGCACCAACACA----ACTGCTCTGATGT-----------AAGTGATCTAAAAAGACATAATTAGGTTTTAAAGCAGATATAAGATAAATGCAATATATGTACTGTGAGCTTAGGGAAAGAAAAAAGGGAAAA----TATCTTTTATCTGAGAAATATATACCACACTAGAAACAGCAAAAATGAAGAATAGA-TATTTTCAAAATTTACTCAAATAAACGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401114 209 - 99763055 ACCCTCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAAAGCAGATATAAGATAAATGAAATATATGTAGTGTGAGTTTAGTAAAAGATAAAAGAGAAAATAAGTATATTTTATCTGAGAAATATATACCACACTAGAAATAGCAAAAATGAAGAACAGA-TATTTTCAAAACTTACTCAAATAAATGG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547452 209 + 121039945 ACCCGCACCAATATA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGATTTTAAAGCAGATATAAGACAAATGCAATACATGTAATGTGAGCTTAGGAAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAAAAACATACACCACACTAGAAACAGCAAAAATGAAGAACAGA-TATTTTCAAAACTTATTCAAATAAATGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200184 209 - 169600520 ATCTGCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAACGTAGATATAAGATACATGCAATATATGTAGTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCGGAGAAATATATACCACACTAGAAACAGCAAAAATGAAAAATAAA-TATTTTCAAAATTTACTCAAATAAATGG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877763 209 - 171882078 ATCTGCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAACGTAGATATAAGATACATGCAATATATGTAGTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCGGAGAAATATATACCACACTAGAAACAGCAAAAATGAAAAATAAA-TATTTTCAAAATTTACTCAAATAAATGG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950547 209 + 40200012 ATCTGCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAACGTAGATATAAGATACATGCAATATATGTAGTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCGGAGAAATATATACCACACTAGAAACAGCAAAAATGAAAAATAAA-TATTTTCAAAATTTACTCAAATAAATGG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396056 205 - 7633303 ATCTGCACCAATACA----ACTCCTCTTATGT-----------AAGTGACCTAAAAATACATAA----GGTTTAACGTAGATATAAGATACATGCAATATATGCAGTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAATATATACCACACTAGAAACAGCAAAAATGAAGAATCAA-TATTTTCAAAATTTACTCAAATAAATGG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36192980 209 + 58131712 ACCTGCACCAATACT----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAAAGTAGATATAAGATACATGCAATATATGTAGAGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAATATATACCACACTAGAAACAGCAAAAATGAAGAATAAA-TATTTTCAAAATTTACTCAAATAAATGG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2586954 209 - 2620224 ATCTGCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAACGTAGATATAAGATACATGCAATATATGTAGTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAATATATACCACACTAGAAACAGCAAAAATGAAGAATAAA-TATTTTCAAAATTTACTCAAATAAATGG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8413812 209 - 10629787 ACCCGCACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGACATAAATAGGTTTTAAAGTACCTATAAAATACATGCAATATATGTAGTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAATATATACCACACTAGAAACAGCAAAAATGAAGAATAAA-TATTTTCATAACTTACTCAAATAAATGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995737 207 - 132174527 GCCCACATCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGCGATAAATAGGTTTTAAAGCAGATATGAGACAAATGTAATATATGTACTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAGTATATACTATGCTAG--ATAGCAAAAATGAAGAATAGA-CTTTTTCAAAATTTACTCAAATAAATGG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796733 208 + 21366645 ACCCATGTCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGTGATAAATAGGTTTTAAAGCAGATATGAGATAAATGTAATAGATGTACTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAATATATACCATGCTAG--ATAGCAAAAACGAAGAATAGATTTTTTTCAAAATTTACTCAAATAAATGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312263 207 + 13033340 ACCCACATCAATACA----ACTCCTCTGATGT-----------AAGTGACCTAAAAAGCAATAAATAGGTTTTAAAGCAGTTATGAGATAAATGTAATATAGGTACTGTGAGCTTAGGGAAAAATAAAAGAGAGAATAAATATCTTTTATCTGAGAAATATATACCATGCTAG--ATAGCAAAAATGAAGAATAGA-TTTTTTCAAAATTTACTCAAATAAATGG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394113 207 - 11604778 ACTCACACCAATACA----ACTCCTCTGATGT-----------AAGTGACCTATAAAGCGATAAATAGGTTTTAAAGCAGATATGAGATAAATGTAATATATGTACTGTGAGCTTAGGGAAAGATAAAAGAGAAAATAAATATCTTTTATCTGAGAAATATATACCATGCTAG--ATAGCAAAAATGAAGAATGGA-TTTTTTCAAAATTTACTCaaataaatgg i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36219809 207 - 36342412 CCCCATACCAATGGA----ATTCTTCTAATAT-----------AAGTTATCCACAGAAAGAGATATAGGGTCTAAACAAGGTATAAAATAAATGCAATATATGAAAAGTGAACTTAGG-AAAGATAAAAGAGAAAATTTATATCTTCAATCTGCAAAAATCATATCACACTAAAAATAGCA-AATTGAAGGATAGA-TATTTTCAATATTTAGTCAAGGAAATAG i otoGar3.GL873530 C 0 I 1 s mm10.chr2 58121330 187 - 182113224 -----------GAGG----ACTCTGCTGACATGCAGATGCAGAGAGAGATACAAGGAGAGATAA-TGCAGCTTAGTGCAAGTGTCAGGTGAGTACAGTGTATGAAAAGGGAGCTTACC-ATAGATAAGAAAGAATATAAATACCTC-----------AAACATATCACACTAGAAACAGCA-AGATGATGAATGTA-TCCT--------TTAGCAAAAGAAATGA i mm10.chr2 C 0 I 1 s canFam3.chr30 26816006 192 - 40214260 TCCCAAACAAATAGG----AATCCTTTGACAT-----------AAATGATCAAAAATGAGTTAG-TAAGACTTAAGGTAGATATAAGATAAATGAAATACATGAAAAGTGAGCTTAGG-------AAAAAAGAAAATAAA-ATCTTTAATTTCAGAAATATAG-------TAGGAATAGCA-AAATGGAGAATAGA-TGTTTTCAGAATTTACTGAAGGAAGTAT i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1070343 195 + 2868945 ------ACAAATGCATAGTACTCTTCTGATAT-----------AAATGATCAAAAAAGAGA----TAGGGTCCAAAGTAGCTATAAGATTACTGGAAGATTTGAAAATTGAGCTTAGGAAATAATAAAAGAGTAAGCAAATCTCTATACTTTCAGATATATATATCACACTAGG-ATAGCA-AAATAAAGTATAGA-TATTTTTA-AATGTAATTAAGGA----- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5826411 1390 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=12376.000000 s hg38.chr14_KI270725v1_random 163030 1 + 172810 T s panTro5.chr1 126790294 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401323 1 - 99763055 T i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5827801 1 + 72422247 T i ponAbe2.chrUn I 1390 I 645 s nomLeu3.chr6 53547661 1 + 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200393 1 - 169600520 T i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877972 1 - 171882078 T i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950756 1 + 40200012 T i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396261 1 - 7633303 T i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193189 1 + 58131712 T i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2587163 1 - 2620224 T i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8414021 1 - 10629787 T i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995944 1 - 132174527 T i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796941 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312470 1 + 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394320 1 - 11604778 t i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1070538 1 + 2868945 T i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121517 1 - 182113224 I e canFam3.chr30 26816198 1 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220016 1 - 36342412 I a score=56459.000000 s hg38.chr14_KI270725v1_random 163031 5 + 172810 GTATA-- s panTro5.chr1 126790295 5 + 228573443 GTATA-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401324 5 - 99763055 GTATa-- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547662 5 + 121039945 GTATA-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200394 5 - 169600520 GTATA-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877973 5 - 171882078 GTATA-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950757 5 + 40200012 GTATa-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396262 5 - 7633303 GTATA-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193190 5 + 58131712 GTATa-- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2587164 5 - 2620224 GTATA-- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8414022 5 - 10629787 GTATA-- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107995945 5 - 132174527 GTATA-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10796942 5 + 21366645 GTATA-- i saiBol1.JH378136 C 0 M 5836 s cebCap1.NW_016107324v1 9312471 5 + 13033340 GTATa-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394321 5 - 11604778 gtata-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36220017 5 - 36342412 ATATA-- i otoGar3.GL873530 I 1 C 0 s mm10.chr2 58121518 5 - 182113224 ATATG-- i mm10.chr2 I 1 C 0 s canFam3.chr30 26816199 5 - 40214260 GTAGA-- i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1070539 5 + 2868945 --ATAAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=9090.000000 s hg38.chr14_KI270725v1_random 163036 1 + 172810 A s panTro5.chr1 126790300 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401329 1 - 99763055 a i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547667 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200399 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147877978 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950762 1 + 40200012 a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396267 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193195 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2587169 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 I 47 s colAng1.NW_012121598v1 8414027 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s cebCap1.NW_016107324v1 9312476 1 + 13033340 a i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394326 1 - 11604778 a i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58121523 1 - 182113224 A i mm10.chr2 C 0 C 0 s canFam3.chr30 26816204 1 - 40214260 A i canFam3.chr30 C 0 I 259 s dasNov3.JH579377 1070544 1 + 2868945 G i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10796947 5836 + 21366645 M e otoGar3.GL873530 36220022 0 - 36342412 C e calJac3.chr10 107995950 0 - 132174527 C a score=8926.000000 s hg38.chr14_KI270725v1_random 163037 2 + 172810 CA s panTro5.chr1 126790301 2 + 228573443 GA i panTro5.chr1 C 0 I 45 s panPan2.chr15 55401330 2 - 99763055 ga i panPan2.chr15 C 0 I 41 s rheMac8.chr7 146200400 2 - 169600520 GA i rheMac8.chr7 C 0 I 45 s macNem1.NW_012010577v1 26950763 2 + 40200012 ga i macNem1.NW_012010577v1 C 0 I 45 s cerAty1.NW_012000887v1 4396268 2 - 7633303 GA i cerAty1.NW_012000887v1 C 0 I 45 s chlSab2.chr26 36193196 2 + 58131712 ga i chlSab2.chr26 C 0 I 45 s colAng1.NW_012121598v1 8414028 2 - 10629787 GA i colAng1.NW_012121598v1 C 0 I 45 s calJac3.chr10 107995950 1 - 132174527 -A i calJac3.chr10 C 0 C 0 s cebCap1.NW_016107324v1 9312477 2 + 13033340 ga i cebCap1.NW_016107324v1 C 0 I 49 s aotNan1.NW_018501505v1 6394327 2 - 11604778 ga i aotNan1.NW_018501505v1 C 0 I 45 s dasNov3.JH579377 1070545 2 + 2868945 GA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121524 0 - 182113224 C e canFam3.chr30 26816205 259 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10796947 5836 + 21366645 M e otoGar3.GL873530 36220022 0 - 36342412 C e manLeu1.NW_012108674v1 2587170 47 - 2620224 I e macFas5.chr7 147877979 0 - 171882078 C e nomLeu3.chr6 53547668 0 + 121039945 C a score=100.000000 s hg38.chr14_KI270725v1_random 163039 1 + 172810 G s dasNov3.JH579377 1070547 1 + 2868945 G i dasNov3.JH579377 C 0 I 56 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e mm10.chr2 58121524 0 - 182113224 C e canFam3.chr30 26816205 259 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10796947 5836 + 21366645 M e otoGar3.GL873530 36220022 0 - 36342412 C e aotNan1.NW_018501505v1 6394329 45 - 11604778 I e cebCap1.NW_016107324v1 9312479 49 + 13033340 I e calJac3.chr10 107995951 0 - 132174527 C e colAng1.NW_012121598v1 8414030 45 - 10629787 I e manLeu1.NW_012108674v1 2587170 47 - 2620224 I e chlSab2.chr26 36193198 45 + 58131712 I e cerAty1.NW_012000887v1 4396270 45 - 7633303 I e macNem1.NW_012010577v1 26950765 45 + 40200012 I e macFas5.chr7 147877979 0 - 171882078 C e rheMac8.chr7 146200402 45 - 169600520 I e nomLeu3.chr6 53547668 0 + 121039945 C e panPan2.chr15 55401332 41 - 99763055 I e panTro5.chr1 126790303 45 + 228573443 I a score=10617.000000 s hg38.chr14_KI270725v1_random 163040 85 + 172810 TTTACACCATTGTAAATTGTAGAACAATTTACAATGTAGAACAATATTTATATTGTTCTAGGTATTACAAAATTTATAGTTGTTT s nomLeu3.chr6 53547668 47 + 121039945 -----------GAAAAAAATTGAGCAAAACAAAACGAAAAAGAATAAATA------------AATAACAA--------------- i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147877979 47 - 171882078 -----------GAAAAAAATCGAGCAAAACAAAATGAAAAAGAATAAATA------------AATAACAA--------------- i macFas5.chr7 C 0 C 0 s calJac3.chr10 107995951 47 - 132174527 -----------GAAAAAAATCAAGCAAAACAAAATGAAAAAGAATAACTA------------AATAACAA--------------- i calJac3.chr10 C 0 I 2 s otoGar3.GL873530 36220022 52 - 36342412 -----ACCAGGAAAAAAAATCAAACAAAACAAGATG-AAAATAATAAATA------------AATAGTAA--------------- i otoGar3.GL873530 C 0 I 6 s mm10.chr2 58121524 44 - 182113224 ---------GCAGGAAAATGCAAGCAAAACAATTCAGAAACTCATA----------------CATGACA---------------- i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1070548 56 + 2868945 I e canFam3.chr30 26816205 259 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10796947 5836 + 21366645 M e aotNan1.NW_018501505v1 6394329 45 - 11604778 I e cebCap1.NW_016107324v1 9312479 49 + 13033340 I e colAng1.NW_012121598v1 8414030 45 - 10629787 I e manLeu1.NW_012108674v1 2587170 47 - 2620224 I e chlSab2.chr26 36193198 45 + 58131712 I e cerAty1.NW_012000887v1 4396270 45 - 7633303 I e macNem1.NW_012010577v1 26950765 45 + 40200012 I e rheMac8.chr7 146200402 45 - 169600520 I e panPan2.chr15 55401332 41 - 99763055 I e panTro5.chr1 126790303 45 + 228573443 I a score=9100.000000 s hg38.chr14_KI270725v1_random 163125 1 + 172810 G s panTro5.chr1 126790348 1 + 228573443 G i panTro5.chr1 I 45 C 0 s panPan2.chr15 55401373 1 - 99763055 g i panPan2.chr15 I 41 C 0 s nomLeu3.chr6 53547715 1 + 121039945 G i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200447 1 - 169600520 G i rheMac8.chr7 I 45 C 0 s macFas5.chr7 147878026 1 - 171882078 G i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950810 1 + 40200012 g i macNem1.NW_012010577v1 I 45 C 0 s cerAty1.NW_012000887v1 4396315 1 - 7633303 G i cerAty1.NW_012000887v1 I 45 C 0 s chlSab2.chr26 36193243 1 + 58131712 g i chlSab2.chr26 I 45 C 0 s manLeu1.NW_012108674v1 2587217 1 - 2620224 G i manLeu1.NW_012108674v1 I 47 C 0 s colAng1.NW_012121598v1 8414075 1 - 10629787 G i colAng1.NW_012121598v1 I 45 C 0 s cebCap1.NW_016107324v1 9312528 1 + 13033340 G i cebCap1.NW_016107324v1 I 49 C 0 s aotNan1.NW_018501505v1 6394374 1 - 11604778 G i aotNan1.NW_018501505v1 I 45 C 0 s mm10.chr2 58121568 1 - 182113224 G i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1070548 56 + 2868945 I e canFam3.chr30 26816205 259 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e saiBol1.JH378136 10796947 5836 + 21366645 M e otoGar3.GL873530 36220074 6 - 36342412 I e calJac3.chr10 107995998 2 - 132174527 I a score=23256.000000 s hg38.chr14_KI270725v1_random 163126 3 + 172810 -GGT s panTro5.chr1 126790349 3 + 228573443 -GGT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401374 3 - 99763055 -GGT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547716 3 + 121039945 -GGT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200448 3 - 169600520 -GGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878027 3 - 171882078 -GGT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950811 3 + 40200012 -GGT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396316 3 - 7633303 -GGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193244 3 + 58131712 -GGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2587218 3 - 2620224 -GGT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8414076 3 - 10629787 -GGT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996000 2 - 132174527 --GT i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10802952 3 + 21366645 -GGT i saiBol1.JH378136 M 5836 C 0 s cebCap1.NW_016107324v1 9312529 3 + 13033340 -AGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394375 3 - 11604778 -GGT i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58121569 4 - 182113224 GGGC i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e dasNov3.JH579377 1070548 56 + 2868945 I e canFam3.chr30 26816205 259 - 40214260 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220074 6 - 36342412 I a score=1281682.000000 s hg38.chr14_KI270725v1_random 163129 137 + 172810 AGAACAATATTTATAGTTGT-TTGAAGGCAGACAAAGATGACCTAAC--ATGTTGCCATGTAT--ATTTTTTCCAGTTTTCCAAATTTGTTTTTATTGCTGGAAGGTTAGTTTGGTCAG-AGTTATTTCACCATATCAGCAAG s panTro5.chr1 126790352 137 + 228573443 AGAACAATATTTATAGTTGT-TTGAAGACAGACAAAGCTGACCTAAC--ATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAAGTTAGTTTGGTCAG-AATTGTTTCACCATATCAGCAAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401377 139 - 99763055 AGAACAATATTTATAGTTGT-TTGAAGACAGACAAAGCTGACCTAACATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAGTTTGGTCAG-AGTTACTTCACCGTATCAGCAAG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547719 139 + 121039945 AGAACAATATTTATAGTTGT-TTGCAAACAGACAAAGCTGACCTAACATATGTTACCATGTAT--ATGTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAGTTTGGTCAG-AGTTACATCACCGTATCAGCAAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200451 133 - 169600520 AGAACAA----TATAGTTGT-TTGAAGACAGACAAAGCTGACCTAATATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAG-TTGGTCAG-ATTTA-TTTACCATATCAGCAAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878030 133 - 171882078 AGAACAA----TATAGTTGT-TTGAAGACAGACAAAGCTGACCTAATATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAG-TTGGTCAG-ATTTA-TTTACCATATCAGCAAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26950814 133 + 40200012 AGAACAA----TATAGTTGT-TTGAAGACAGACAAAGCTGACCTAATATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAG-TTGGTCAG-ATTTA-TTTACCATATCAGCAAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396319 137 - 7633303 AGAACAATATTTATAGTTGT-TTGAAGACAGACAAAGCTGACCTAATATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAG-TTGGTCAG-ATTTA-TTCACCATATCAGCAAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193247 137 + 58131712 AGAACAATATTTATAGTTGT-TTGAAGACAGACAAAGCTGACCTAACATATGTTACCATGTAT--ACTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAG-TTGGTCAG-ATTTA-TTCACCATATCAGCAAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2587221 137 - 2620224 AGAACAATATTTATAGTTGT-TTGAAGACAGACAAAGCTGACCTAATATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAG-TTGGTCAG-ATTTA-TTCACCATATCAGCAAG i manLeu1.NW_012108674v1 C 0 I 1663 s colAng1.NW_012121598v1 8414079 137 - 10629787 AGAACAATATTTATAGTTGT-TTGAAGACAGACAAAGCTGACCTAACATATGTTACCATGTAT--ATTTTATCCAGTTTTCCAATTTTGTTTTTATTGCTGGAAGGTTAA-TTGGTCAG-ATTTA-TTCGCCATATCAGCAAG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996002 138 - 132174527 AGAACAATATGTATAGTTGT-TTGAAGACAGATGAAGCCAACCTAACATATGTTACCATATAT--ATTTTATTCAGTTTTACAA-TTTGTTTTTATTTTTGGAGGATTAATTTGGTCAG-AGTTGCTTCACCATATCTGTAAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10802955 134 + 21366645 AGGACAATATGTATAGTTGT-TTGAAGACAGATGAAGCCAACCTAACATATGTTACCATATAT--ATTTTATCCATTTTTACAA-TTTGTTTTTATTTTTGGATGGTTAATTTG----G-AGTTACTTCACCATATCTGTAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312532 138 + 13033340 AGAACAATATATATAGTTGT-TTGAAGACAGATGAAGCCAACCTAACATATGTTACCATATAT--ATTTTATCCAGTTTTACAA-TTTGTTTTTGTTTTTGGAGGGGTAATTTGGTCAG-AGTTACTTCACCATATCTGTAAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394378 136 - 11604778 AGAACAATATGTATAATTGT-TTGAAGACAGATGAAGCCAACCTAACATATGTTACCATATAT--ATTTTATCCAGTTTTACAA-TTTGTTTTTATTTTTGGAGGGTTAATTTGGTC---AGTTACTTCACCATATCTGTAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36220080 127 - 36342412 --AGCAGTATTTAGAGTTAT-TTGAAGATAGACAAAGCAGAACTAAC-TAGGTTGCCATATAT--GTTTTAT---ATTT------TTATTTTTTGTGGCTGGAGGGTTAACATGGCAAA-AAGTACTTCACCATGTCGGTAAG i otoGar3.GL873530 I 6 C 0 s mm10.chr2 58121573 135 - 182113224 AGA--CATATTTAAAGCTCT-TTGAAGAAGGAGGACCCTGACC-AATCTTTGTGGTCATGTGTTGGCATTACCCAGGTTTGTAGTCTTATATCT---GCTTGAGGGTTAG-TTAGTCAGCAGTTACTTTATCACGTACCCAAA i mm10.chr2 C 0 C 0 s canFam3.chr30 26816464 129 - 40214260 AGAACAATATTTATAGTTAT-TTCAAGACAGACAAAACTGACCCAACATAAGTTGTTTTATAT--ATTTTATCTAGTTCTATAAATT--TTCCTATGCCTGGA--------TTGGTAAT-AGTTACTTCATTGTGTCTGCATG i canFam3.chr30 I 259 C 0 s dasNov3.JH579377 1070604 135 + 2868945 AGAATACTATTTATACTTGTACTGAAGACAGGATTAGCTAACCCAACATGTGTCGCAATATAT--ATTTCATCCTGTAT--CAAATTTGGG---GGGCATGGAGGATTAGTTTGATAGC-AGTTATTTTATCATGTCTGAACA i dasNov3.JH579377 I 56 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I a score=832514.000000 s hg38.chr14_KI270725v1_random 163266 150 + 172810 -TATAATTTTCCAAACTCACACC--CCTTACTT-----------------------TTTGTATCT---------------------------------------------------TA----------------TTTTTTATCC-------------------------------------------------TTTTATTACATATT-TT-----------ATA----ATAT-ATAT--TC---AATACTGAATTATACAGTAAAT-AAAAAAT--AAAATATGAACACAACAATTTCATACAAA-CGGTGAGTTTTT s panTro5.chr1 126790489 152 + 228573443 -TATAATTTTCCAAACTCACACC--CCTTACTT-----------------------TCTGTGTCT---------------------------------------------------TA----------------TTTTTTATCC-------------------------------------------------TACTATTACATATT-TT-----------ATA----ATATTATATA-TC---CATACTGAATTATACAGTAAAT-AAAAAAT--CAAATATGAACACAAAAATTTCATAGAAA-TGGTGAGGTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401516 157 - 99763055 -TATAATTTTCTAAACTGACACC--CCttacct-----------------------tttatatct---------------------------------------------------ta----------------ttttttatccta----------------------------------------------ttattattacatatt-tt-----------ata----atattatatattc---catactgaattatacagtaaataAAAAAAT--AAAATATGAACAAAACAATTTCATAGAAA-TGGTGAGGTTTT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53547858 150 + 121039945 -TATAATTTTCTAAATTGACACC--CCTTGCTT-----------------------TTTATATCT---------------------------------------------------TA----------------TTTTTTATCCTA----------------------------------------------TTATTATTATATATT-TT-----------ATA----ATATTATATATTC---CATACTGAATTATACAGTAAAT-AAAAAA--------ATGAACAAAACAATTTCATAGAAA-TGGTGAGGTTTT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200584 162 - 169600520 -TGTAATCTTCTAAATTGACACC--CCTTACTT-----------------------TTTGTATCTTTT----------------------------------------------TGTA----------------TTTTTTACCCta----------------------------------------------ttattattacgtatt-tt-----------ata----atattatatattC---CACACTGAATTATACAGTAAATAAAAAAAT--AAAATGTGAACAAAACAATTTCACAGAAA-TGGTGAGGTTTT i rheMac8.chr7 C 0 I 3 s macFas5.chr7 147878163 162 - 171882078 -TGTAATCTTCTAAATTGACACC--CCTTACTT-----------------------TTTGTATCTTTT----------------------------------------------TGTA----------------TTTTTTACCCta----------------------------------------------ttattattacgtatt-tt-----------ata----atattatatattC---CACACTGAATTATACAGTAAATAAAAAAAT--AAAATGTGAACAAAACAATTTCACAGAAA-TGGTGAGGTTTT i macFas5.chr7 C 0 I 3 s macNem1.NW_012010577v1 26950947 162 + 40200012 -TGTAATCTTCTAAATTGACACC--CCTTACTT-----------------------TTTGCATCTTTT----------------------------------------------TGTA----------------TTTTTTACCCta----------------------------------------------ttattattacatatt-tt-----------ata----atattatatattC---CACACTGAATTATACAGTAAATAAAAAAAT--AAAATGTGAACAAAACAATTTCACAGAAA-TGGTGAGGTTTT i macNem1.NW_012010577v1 C 0 I 3 s cerAty1.NW_012000887v1 4396456 162 - 7633303 -TGTAATCTTCTAAATTGACACC--CCTTACTT-----------------------TTTGTATCTTTT----------------------------------------------TGTA----------------TTTTTTACCCta----------------------------------------------ttattattacgtatt-tt-----------ata----atattatatattC---CACACTGAATTATACAGTAAATGAAAAAAT--AAAATGTGAACAAAACAATTTCACAGAAA-TGGTGAGGTTTT i cerAty1.NW_012000887v1 C 0 I 3 s chlSab2.chr26 36193384 162 + 58131712 -TGTAATCTTCTAAATTGACACC--CCTTACTT-----------------------TTTGTATCTTTT----------------------------------------------TGTA----------------TTTTTTACCCta----------------------------------------------ttattattacgtatt-tt-----------ata----atattatatattC---CACACTGAATTATACAGTAAATAAAAAAAT--AAAATGTGAACAAAACAATTTCATAGAAA-TGGTGAGGTTTT i chlSab2.chr26 C 0 I 3 s colAng1.NW_012121598v1 8414216 161 - 10629787 -TGTAATCTTCTAAATTGACATC--CCTTACTT-----------------------TTTGTATCTTTT----------------------------------------------TGTA-----------------TTTTTATCCta----------------------------------------------ttattattacgtatt-tt-----------ata----atattacatattc---cataCTGAATTATACAGTAAATAAAAAAAT--AAAATGTGAACAAAACAATTTCATAGAAA-TGGTGAGGTTTT i colAng1.NW_012121598v1 C 0 I 3 s calJac3.chr10 107996140 156 - 132174527 -TATAATTTTCTAAACTGACACT--CTTTA-TT-----------------------TTTATATCTT--------------------------------------------------GA-----------------TTTTTATCCTA---------------------TTAAG-----------------CATTTATTACTACTTATT-TT------------------ATATTATATATTA---CATACTGAATTATACAGTAAATTAAAAAAC--AAAATATTAACAAAACAATTTCATAGAAA-TGAG----TTT- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803089 162 + 21366645 -TATAATTTTCTAAACTGACACC--CTTTACTT-----------------------TTTATATCTT--------------------------------------------------GA----------------TTTTTTATCCTA---------------------TTAAG-----------------CCTTCATTACTACTTATT-TT------------------ATATTATGTATTA---CATACTGAATGATACAGTAAATTAAAAAAC--AAAATATTAACAAAACAACTTTATAGAAA-TGAGGTTTTTT- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312670 156 + 13033340 -TATAATTTTCTAAACTGAAACC--CTTAACTT-----------------------TTTATATCTT--------------------------------------------------GA----------------TTTTTTATCC------------------------TAAG-----------------CCTTCATTACTACTtatt-tt------------------atattatatatta---catactgaattatacagtaaatTAAAAAAC--AAAATATTAACAAAACAACTTCATAGAAA-TGAG---TTTT- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394514 159 - 11604778 -TATAATTTTCTAAACTGACACC--CTttactt-----------------------tttacatctt--------------------------------------------------ga----------------ttttctatctta---------------------ttaag-----------------catttattactacttatt-tt------------------atattacatatta---cataCTGAATTATACAGTAAATTAAAAAAC--AAAATATTAACAAAACAATTTCATAGAAA-TGGG---GTTT- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36220207 292 - 36342412 -TGTAATTCTTCAAACCATAGCCTACCTTGTTTACAATTTGCTATTTTTAGTGTGATATGTATTTTTTCAGATTAAAGATATTTATTTACAAGCTATTTACAAAAGAGTCTCTATGTACTGGCCA--------CTTCTTTGTCAAAGTTTATAATGAATACTTTGTATAAAGG----------TGCGTTTAGCTATAATTTCCTGTT-TTCCCTGAGTGGGATACCCTGTGTTATATATTA---CATACTGAATTGTTCAGTAAATTAAAAACC--AAAATGTTAACAGAATAATTTCAAGGAGATTGGTAGGATTT- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58121708 127 - 182113224 -TACATTTTTCAAACGTAAAGGC----TCATTT-----------------------CCAAAAGCATTA------------------------------------------------GA----------------ATTTTTATAATT-----------------------------------------TGCTTTTATTATTGAATGAG-TT-----------TAA----A----AGATATTA---TACATCG--TGATGCATTAAATTTAAAAAT------CATCAATGAAG--------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr30 26816593 196 - 40214260 -TGTAAGACTCAAAACTTATATC--CTTTACTT-----------------------CTTATATCTTTG------------------------------------------------TATGGACTATTACATAtttttcttctcctt---------------------ctccttctcttcttcctcctgctccttcttcttctATGTT-TT-----------C------ATGATGTATATTA---TATAATGAATTATGCAGTCAATGACAAAATGTAAAATATCAACCAAATAACCTCAAAGGAA-TGAACAT----- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1070739 146 + 2868945 TTGT----CTCCAAATTTATAAC--CTTCATTT-----------------------CTTATATCTT--------------------------------------------------TA---------------------------G----------------------------------------------CTAATATTATATATTCTT-----------ATA----CCATTATATATGATATTATATTGACTTATGTCATCAAT-TAAAAAC--AGAATATCAATGAAATAATATTAAAGGAA-TACTAGGAAAT- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e nasLar1.chr7 130387991 32825 - 153844193 I e rhiRox1.KN300076v1 2063606 9481 + 2481265 I e papAnu3.chr7 140791855 13520 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e manLeu1.NW_012108674v1 2587358 1663 - 2620224 I a score=3346.000000 s hg38.chr14_KI270725v1_random 163416 1 + 172810 T s panTro5.chr1 126790641 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401673 1 - 99763055 T i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548008 1 + 121039945 T i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200749 1 - 169600520 C i rheMac8.chr7 I 3 C 0 s macFas5.chr7 147878328 1 - 171882078 C i macFas5.chr7 I 3 C 0 s macNem1.NW_012010577v1 26951112 1 + 40200012 C i macNem1.NW_012010577v1 I 3 C 0 s cerAty1.NW_012000887v1 4396621 1 - 7633303 C i cerAty1.NW_012000887v1 I 3 C 0 s papAnu3.chr7 140805375 1 - 162156779 C i papAnu3.chr7 I 13520 I 13131 s chlSab2.chr26 36193549 1 + 58131712 C i chlSab2.chr26 I 3 C 0 s nasLar1.chr7 130420816 1 - 153844193 C i nasLar1.chr7 I 32825 I 5449 s colAng1.NW_012121598v1 8414380 1 - 10629787 C i colAng1.NW_012121598v1 I 3 C 0 s rhiRox1.KN300076v1 2073087 1 + 2481265 C i rhiRox1.KN300076v1 I 9481 N 0 s rhiBie1.NW_016805531v1 2344331 1 + 4596561 C i rhiBie1.NW_016805531v1 N 0 I 12867 s calJac3.chr10 107996296 1 - 132174527 T i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803251 1 + 21366645 T i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312826 1 + 13033340 T i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394673 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58121835 1 - 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr30 26816789 1 - 40214260 C i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1070885 1 + 2868945 T i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220499 0 - 36342412 C e manLeu1.NW_012108674v1 2587358 1663 - 2620224 I a score=1700575.000000 s hg38.chr14_KI270725v1_random 163417 200 + 172810 TTTTTTAGTTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCTAGAACTCATTTTATGGAAAAAGTGAAAACAATTTGCAACATTAAAATA-------ATTAATCAGAACTTCAATCCAGATTAAGAAGGAATAGAGAACAAATATTAAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA s panTro5.chr1 126790642 193 + 228573443 TTT---AATTGAAGCAGAAAT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCATTTTATGGAAAAACTGAAAACAATTTGCAACATTAAAATA-------ATTA----GAACCTCAATCCAGATTAAGAAGGAATAGAGAACAAATGTTAAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401674 199 - 99763055 TTT-TTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATAATGCAGTAA------------AGAAATAAACTCAAGAACTCACTTTATGGAAAAAGTGAAAACAATTTGCAACATTAAAATA-------ATTAATCAGAACCTTAATCCAGATAAAGAAGGAATAGAGAACAAATACTAAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548009 197 + 121039945 TTTTTTAATTGAAGCAGAAGT--TTATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCACTTTATGGAAAAAGTGAAAACAATTTGCGACATTAAAATA-------ACTAATCAGAACCTCAATCCAGATAAAGAAGGAATAGAGAACAAATATTAAAATT----GGAA--GGCAATGAAA------AT---ATCACAGATATTGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200750 200 - 169600520 TTTTTTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCATTTTGTGGAAAAAGTGAAAGCAATTTGCAACATAAAAATA-------ATTAATCAGAACCTCAATCCAGATAAAGAAGGAATAGAGAACAAATATTGAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878329 200 - 171882078 TTTTTTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCATTTTGTGGAAAAAGTGAAAGCAATTTGCAACATAAAAATA-------ATTAATCAGAACCTCAATCCAGATAAAGAAGGAATAGAGAACAAATATTGAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951113 200 + 40200012 TTTTTTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAATAACTCATTTTGTGGAAAAAGTGAAAACAATTTGCAACATAAAAATA-------ATTAATCAGAACCTCACTCCAGATAAAGAAGGAATAGAGAACAAATATTGAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396622 200 - 7633303 TTTTTTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCATTTTGTGGAAAAAGTGAAAACAATTTGCAACATAAAAATA-------ATTAATCAGAACCTCAATCCAGATAAAGAAGGAATAGAGAACAAATATTGAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193550 200 + 58131712 TTTTTTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCATTTTATAGAAAAAGTGAAAACAATTTGCAACATTAAAATA-------ATTAATCAGAACTTCAATTCAGATAAAGAAGGAATAGAGAACAAATATTGAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATATTGA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8414381 200 - 10629787 TTTTTTAATTGAAGCAGAAGT--TCATGACTTGAAAATAGAATGATGCAGTAA------------AGAAATAAACTCAAGAACTCATTTTATGGAAAAAGTGAAAACAATTTGCAACATTAAAATA-------ATTAATCAGAACCTCGATTAAGATAAAGAAGGAATAGAGAACAAATATTGAAATT----GGAA--GGCAATGAAA------ATATAATCACAGATACTGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996297 200 - 132174527 CTTTTAAATTGAAGCAGAAGT--TCCTGACTTGAGGATAGAAAGATGGAGTAA------------AGAAATAAACTCAAGAACTCATTCTACAGGGAAAGTGAAAACAATTTACAACATTACAATA-------ATTAATTAGAACATCAAGCCAGATAAAGAAGGAATAGAGAGGTAATATTAAATTT----GGAA--GGCAATGAAA------ATATAATCATAGATATTGG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803252 200 + 21366645 TTTTTTAATTGAAGCAGAAGT--TCCTGACTTGAAGATAGAATGATGGAGTAA------------ATAAATAAACTCAAGAACTCATTCTACAGGGAAAGTGAAAATAATTTACAACATTACAATA-------ATTAATCAGAACCTCAATCCAGATAAAGAAGGAACAGAGAGGTAATATTAAATTT----GGAA--GGCAGTGAAA------ATATAATCACAGATATTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9312827 198 + 13033340 TTTTTTAATTGAAGCAGAAGT--TCCTGAC--GAAGATAGAATGATGGAGTAA------------ATAAATAAACTCAAGAACTCATTCTACAGGGAAAGTGAAAATAATTTACAGCATTACAATA-------ATTAATCAGAACCTCAGTCCAGATAAAGAAGGAATAGAGAGGTAATATTAAATTT----GGAA--GGCAATGAAA------ATATAATCACAGATATCGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394674 200 - 11604778 TTTTTTAATTGAAGCAGAAGT--TCCTGACTTGAAGATAGAATGATGGGGTAA------------AGAAATAAACTCAAGAACTTATTCTACAGGGAAAGTGAAAACAATTTACAACATTACAATA-------ATTAATCAGAACCTCAATCCAGATAAAGAAGTAATAGAGAGGTAATATTAAATTT----GGAA--TGCAATGAAA------ATATAATCACAGATATTGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36220499 180 - 36342412 -----------AAAAAAAATTAATCATTGCTTGAAAATATAATGACAGGCTAA------------AGAAATAACCTCAGGATCTCATTATTTGGAAAAACT-AAAACAATTCACAATAATTCAATGTATGTGTGTTTATCTGA---------------------GAATAAAGTTTCATTATTAATACTCATAATAA--TAAAATGAGA------ATATTCTCAAATATATTTA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58121836 203 - 182113224 ATTTTTAGAAGAATGACAAGT--GTAA-----AAAAATAACAGGAGTCACTAATGTTAAGAAAACAAAAATTAACCCAAGAGCTGGTTCTTTGAAAAGAGTTGAAACaaattataataataatata-------aattaCAACATTCCCACTCAAGGT-----ATGAAACAATATCAAGTCTTAAAAAT----TGGC--TGCTATGGAATAGTATATATAAGGAGAAAA----- i mm10.chr2 C 0 C 0 s canFam3.chr30 26816790 179 - 40214260 TTTTTAAACTGGAGCAGGAAT--TCATGACTTGAAAATATAATGATAAGATA-------------ACAAATAAACCCAAGAATTAGTTCTTTGGATAAAATAAAAATAATATACCACAGTAAAATA-------TTTCACAGAAGTTTCAATCTAGACAAATTAGAAACAAATCCGTAATATTAACAT-----AGAA--ATTAATCAAA------------------------- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1070886 200 + 2868945 TTTATCACTTTAAGCAGAGAT--TCATGACTTGAAAATAGAAT-ATAGGGCAA------------A-AAATAGAACCAAAGACTGGTTCTCTGGGCAAAGTAGAAACAATTTATGGCATTAAAATA-------ATTCACCAGATTCTCAATACAGGTAAATGAGGAGTTAAGACTCCAAATTAAAATT----AAACATGAAAATAGAA------ATATGACCATAGATATTGA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e manLeu1.NW_012108674v1 2587358 1663 - 2620224 I a score=320586.000000 s hg38.chr14_KI270725v1_random 163617 40 + 172810 TC-----AAGTTATTAGATAAGATAATTTTCTTAATTTTACACAA s panTro5.chr1 126790835 40 + 228573443 TC-----AAGTAATTAGATAAGATCATTTTCTTAATTTTACACAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401873 35 - 99763055 TC-----AGGTA-----ATAAGATCATTTTCTTAATTTTACACAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548206 40 + 121039945 TC-----AAGTAATTAGATAAGATCATTTTCTTAATTTTACACAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200950 40 - 169600520 TC-----AAATAATCAGATAAGATCATTTTCCTAATTTTACACAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878529 40 - 171882078 TC-----AAATAATCAGATAAGATCATTTTCCTAATTTTACACAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951313 40 + 40200012 TC-----AAATAATCAGATAAGATCATTTTCCTAATTTTACACAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396822 40 - 7633303 TC-----AAATAATCAGATAAGATCATTTTCCTAATTTTACACAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193750 40 + 58131712 TC-----AAGTAATCAGATAAGATCATTTTCCTAATTTTACACAA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8414581 40 - 10629787 TC-----AAGTAATCAGATAAGATCATTTTCCTAATTTTACACAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996497 45 - 132174527 TCAAGCTAAGTAATTAGGTAAGATCATTTTCTTAATCTTATGGAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803452 45 + 21366645 TCAAGCTAAGTAATTAGATAAGATCATTTTCTTAATTGTATGCAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313025 45 + 13033340 TCAAGCTAAGTAATTAGATAAGATAATTTTCTTAATTTTATGCAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394874 45 - 11604778 TCAAGCTAAGTAATTAGATAAGATCATTTTCTTAATTTTATACAG i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58122039 39 - 182113224 TT-----AAATAATTTTGTAAGATC-TTTTTTTAACTTCATGGAA i mm10.chr2 C 0 C 0 s canFam3.chr30 26816969 39 - 40214260 TT-----AAATAATTATACAAGACTACTTTATTAACTTT-TGCAA i canFam3.chr30 C 0 I 543 s dasNov3.JH579377 1071086 44 + 2868945 TCAAATTGAATAATGA-ATAAAGCCATTTTCTTAACTTTATGCAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C e manLeu1.NW_012108674v1 2587358 1663 - 2620224 I a score=121730.000000 s hg38.chr14_KI270725v1_random 163657 12 + 172810 ATATATTGGAAA s panTro5.chr1 126790875 12 + 228573443 ATATATTGGAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401908 12 - 99763055 ATATATTGGAAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548246 12 + 121039945 ATATATTGGAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146200990 12 - 169600520 ATATATTCGAAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878569 12 - 171882078 ATATATTCGAAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951353 12 + 40200012 ATATATTCGAAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396862 12 - 7633303 ATATATTGGAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193790 12 + 58131712 ATATATTGCAAA i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8414621 12 - 10629787 ATATATTGGAAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996542 12 - 132174527 ATATATTGGAAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803497 12 + 21366645 ATATATTGGAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313070 12 + 13033340 ATATATTGGAAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394919 12 - 11604778 ATATACTGGAAA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58122078 12 - 182113224 ATATGTTGTAAA i mm10.chr2 C 0 C 0 s canFam3.chr30 26817551 12 - 40214260 ATATATTGAAAG i canFam3.chr30 I 543 C 0 s dasNov3.JH579377 1071130 12 + 2868945 ATACATAGGAAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C e manLeu1.NW_012108674v1 2587358 1663 - 2620224 I a score=467152.000000 s hg38.chr14_KI270725v1_random 163669 51 + 172810 CCCTGGATTATACGA-TATTT-CCATATGAAAATATAAGTGACCAAAATG---ACA s panTro5.chr1 126790887 52 + 228573443 CCTTGGATTATATGA-TTTTTTCCATATGAAAATGTAAGTGACCAAAATG---ACA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401920 55 - 99763055 CCCTGGATTATATGA-TTTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548258 55 + 121039945 CCCTGGATTATATTA-TTTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201002 56 - 169600520 CCCTGGATTATATGATTTTTTTCCGTATGAAAATATAAGTGACCAAAATGACTACA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878581 56 - 171882078 CCCTGGATTATATGATTTTTTTCCGTATGAAAATATAAGTGACCAAAATGACTACA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951365 54 + 40200012 CCCTGGATTATATGA--TTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396874 55 - 7633303 CCCTGGATTATATGA-TTTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193802 55 + 58131712 CCCTGGATTATATGA-TTTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589021 55 - 2620224 CCCTGGATTATATGA-TTTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i manLeu1.NW_012108674v1 I 1663 C 0 s colAng1.NW_012121598v1 8414633 56 - 10629787 CCTTGGATTATATGATTTTTTTCCATATGAAAATATAAGTGACCAAAATGACTACA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996554 55 - 132174527 CCCTGCATTATACAA-TTTTTTTCATATGAAAATATAAGTGACCAAAATGACTACA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803509 55 + 21366645 CCCTGCATTATATGA-TTTTTTTCATTTGAAAATATAAGTGACCAAAATGACTACA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313082 55 + 13033340 CCCTGCATTATATGA-TTTTTTTCACATGAAAATATAAGTGACCAAAATGACGACA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394931 55 - 11604778 CTCTGCATTATATGA-TTTTTTTAATATGAAAATATAAGTGACCAAAATGACTACA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58122090 20 - 182113224 ------------------TTATGACTACAAAATTATAA------------------ i mm10.chr2 C 0 C 0 s canFam3.chr30 26817563 55 - 40214260 CCCTGGATAATATGA-TTTTTTTCTTAGGAAAACCTAAATGACCGACATTTCCAAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1071142 42 + 2868945 -CCTG--TGATATGA-TTTTTTCCCATGGAAAATATAAAT-ACTGAA--------- i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5827802 645 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=30303.000000 s hg38.chr14_KI270725v1_random 163720 2 + 172810 AG s panTro5.chr1 126790939 2 + 228573443 AG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401975 2 - 99763055 AG i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5828447 2 + 72422247 AG i ponAbe2.chrUn I 645 I 2015 s nomLeu3.chr6 53548313 2 + 121039945 AG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201058 2 - 169600520 AG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878637 2 - 171882078 AG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951419 2 + 40200012 AG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396929 2 - 7633303 AG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193857 2 + 58131712 AG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589076 2 - 2620224 AG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8414689 2 - 10629787 AG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996609 2 - 132174527 AG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803564 2 + 21366645 AG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313137 2 + 13033340 AG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394986 2 - 11604778 AG i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58122110 2 - 182113224 AA i mm10.chr2 C 0 C 0 s canFam3.chr30 26817618 2 - 40214260 AG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1071184 2 + 2868945 AG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=792876.000000 s hg38.chr14_KI270725v1_random 163722 80 + 172810 AGTTATAAAATCTCAGTATCTT-ATTAA------TGAAGAAAAAGATGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA s panTro5.chr1 126790941 80 + 228573443 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTGAGG--ATATAAAATTCTGAACATTCTTCTCTCAACAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55401977 80 - 99763055 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTCAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548315 80 + 121039945 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGAAGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201060 80 - 169600520 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878639 80 - 171882078 AGTTATAAAATCTCAGTGTCTT-ATTAA------TGCAGAAAAAGATGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951421 80 + 40200012 AGTTATAAAATCTCATTATCTT-ATTAA------TGCAGAAAAAGATGCTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4396931 80 - 7633303 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193859 80 + 58131712 AGTTCTAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTGAAG--ATATGAAATTCTGAACATTCTCCTCTCAACAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589078 80 - 2620224 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8414691 80 - 10629787 AGTTATAAAATCTCAGTATCTT-ATTAA------TGCAGAAAAAGATGTTGAAG--ATATAAAATTCTGAACATTCTCCTCTCAACAAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996611 80 - 132174527 ATTTATAAAATCTCAATATCTT-ATTAA------TGCAGAAATAGATGTTGTAG--GTATAAAATTCTGAGCATTCTCCTCTCAACAAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803566 80 + 21366645 ATTTATAAAATCTCAATATCTT-ATTAA------TGCAGAAATAGATGTTGTAG--GTATAAAATTCTGAGCATTCTCCTCTCAACAAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313139 81 + 13033340 ATTTATAAAATCTCAATATCTTAATTAA------TGCAGAAATAGATGTTGTAG--GTATAAAATTCTGAGCATTCTCCTCTCAACAAG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6394988 80 - 11604778 ATTTATAAAATTTCAATATCTT-ATTAA------TGCAGAAATAGATGTTGTAG--GAATAAAATTCTGAGCATTCTCCTCTCAACAAA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58122112 73 - 182113224 ACTAATAATAGCTTAGCTTCAT-ATGACATCTTTTGCTAAAAT--------CTG--ACACAAGCATTGACATATCCCCCTTGCA----- i mm10.chr2 C 0 C 0 s canFam3.chr30 26817620 78 - 40214260 GGTTAGAAAA--TCAATATCTT-ATTAA------TAAAGAAAAAGATGTGAGAG--ATATAAAAGTATGTATATTTTTCTCTCAACAAA i canFam3.chr30 C 0 I 216 s dasNov3.JH579377 1071186 74 + 2868945 GGTTAGAAAATCTA-----CAT-ATCAA------TACAGAA---GGTGTGGAAGTTATATAAAAGCATTAACATTCTCTTCTCAACAAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=3811552.000000 s hg38.chr14_KI270725v1_random 163802 348 + 172810 --CA-GACAAATCAGCAAGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCTcttctaattctagctatgacaagttaatttgtatcaggccatcccacctggcaagaacaattatgaaagctgggtaaaattaattaaaaataagtagctattta-----aaggcttctgatagcaatcaaagcatccagaacttgagtgtgtaagctcccagaaagaagagaaacacattgaagtgatttcaacattctccacagcctttcatttggatacatttgctgagcagatagctaagaagaaaacggtagctcagaga s panTro5.chr1 126791021 346 + 228573443 --CA-GACAAATCAGCAAGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTA--GTTTTCCTcttctaattctagctatgacaagttaatttgtatcaggccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttctgataacaatcaaagcatccagaacttgagtgtataacctcccagaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggatacgtttgctgagcagacagctaagaagaaaatggtagctcagaga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402057 348 - 99763055 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACGGATAACTCAATGCTATTTAAAGTTTTCCacttctaattctagctatgacaagttaatttgtatcaagccgtcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgagtgtctaagctcccagaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggatacatttgctgagcagatagctaagaagaaaatggtagctcagaga i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548395 346 + 121039945 --CA-A--AAATCAGTAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgagcgtctaagctcccagaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggatgcacttgctgagcagatagctaagaagaaaatggtagctcagaga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201140 344 - 169600520 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCacttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgactgtctg----tctcgaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggatacatttgctgaacagatagctaagaagaaaatggtagctcagaga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147878719 344 - 171882078 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagctatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatggcaatcaaagcatccagaacttgactgtctg----tctcgaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggatacatttgctgaacagatagctaagaagaaaatggtagctcagaga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951501 344 + 40200012 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgactgtctc----tctcgaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggatacatttgctgaacagatagctaagaagaaaatggtagctcagaga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397011 344 - 7633303 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgactgtctg----tcttgaaagaagagaaacacattgaagtgatttcaacattctccacaacctttcatttggaaacatttgctgaacagatagctaagaagaaaatggtagctcagaga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36193939 339 + 58131712 --CA-GACAAATCAGCAGGCATGAACATTTTCACGAAGAAATGTATCAAGACATGAAAGTACTGAT-----AATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgactgtctg----tctcgaaagaagagaaacacattgaagtgatttcaacattctccaccacctttcatttggatacattggctgaacagatagctaagaagaaaatggtagctcagaga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589158 344 - 2620224 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgactgtctg----tctcgaaagaggagaaacacattgaagtgatttcaacattctccacaacctttcatttggatacatttgctgaacagatagctaagaagaaaatggtagctcagaga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8414771 344 - 10629787 --CA-GACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAATGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----aggacttccgatagcaatcaaagcatccagaacttgactgtctg----tctcgaaagaagagaaacacgttgaagtgatttcaacattctccacaacctttcatttggatacatttgctgaacagatagctaagaagaaaatggtagctcacaga i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107996691 345 - 132174527 --C---ACAAATCAGCAGGCATGAACATTTTCAAGAATAAATGTATCAAGACATGAAAGTACTGATAACTCAGTGCTATTTAAAG-TTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacctgagagtctaagctcccagaaggaagagaaacacattgaagtgatttcaacattctccaccacctttcattttgatagatttgctgagcaaatagctaagaagaaaatggtagctcagaga i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803646 346 + 21366645 --C---ACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTAATGATAACTCAGTGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgagactctaagctcccagaaagaagagaaacacattgaagtgatttcaacattctctaccacctttcattttgatacatttgctgagcaaatagctaagaagaaaatggtagctcagaga i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313220 346 + 13033340 --C---ACAAATCAGCAGGCATGAACATTTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAGTGCTATTTAAAGTTTTCCACttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgagagtcaaagctcccagaaagaagagaaacacactgaagtgatttcaacattctccaccacctttcattttgatacatttgctgagcaaatagctaagaagaaaatggtagctcagaga i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395068 345 - 11604778 --CA-GACAAATCAGCAGGCATGAACATGTTCAAGAAGAAATGTATCAAGACATGAAAGTACTGATAACTCAGTGCTATTTAAAGTTTTCCATttctaattctagctatgacaagttaatttgtatcaagccatcccacctggcaagaacaattatgaaagctggataaaattaattaaaaataagtagctattta-----agggcttccgatagcaatcaaagcatccagaacttgagagtctaagctcccagaaagaagagaaatacattgaagtgatttcaacattctccaccacctttcattttgatacatttgctgagcaaatagct---aagaaaatggtagttcagaga i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58122185 320 - 182113224 ------CTAAGTCAGTAGGCATGGACATTTTTGGGGA-ACATTTATTAGGACATTAAAAAATTGGTAACCCAGCACTGTTTGAAGTCTTTTGCTTGTCTTTCTAGCTATGACAATCTATTATAGACCAAGCCTTCTCATCTG--AAAAATAGCTTTAAA-------TAAAAAAAATTAAGAGACAGTAGCGTTTTAACTTTATGGACTAGGATAG------------------ATTGGGAATAAAATTTCTCAGAGAGAGGAGAAAGCTACTCTGTTGATTCTAACATTCTCCACAACATTTTACTT-GATACATTTG-TAAGCAGCCTCTCAAGAAGAAAGCAGAGGCTCAAAAA i mm10.chr2 C 0 I 1830 s canFam3.chr30 26817914 343 - 40214260 --CA-AACAAAGCAGCACACATGGCTATTTTTAGGTAGAAATATATTACGACATGAAAGTACTAATAACTCAATGCTACCTAAAGTGTTCCACttctaattccagctatatcaaaataatttgtatcaagccattccacttggcaagaacaattatgaaatatggataaaattaattaaaaataaatagctattta-----aagacatcagataccaattaaagtattcggaac-tgaatatccaagctcccagatatgagagaaacacattaatgtgacttcagcattctccactccttttcattt-gatacatttgctgaGTAGGTAGTCAAGAAGAAA---GTGGCTCAATGG i canFam3.chr30 I 216 C 0 s dasNov3.JH579377 1071260 342 + 2868945 CACATAAAAAATTAGCTTGTTTTGATATTTTCTTATAGAAATCTATCATGACATGAAAGTATCGATAACTCACTGCTATTTATCATTttgcac------ttccagttatgacaagataatttgtatgaagccattccacctgacaagaacaattatgaatgctagataaaattaaataaaactgaacagctatttg-----atggcatcaaacattagtcaaatcatgcagcacttgagagtcca---ctcttgcaagaagagaaacacattggggtgattccaacattctctaccacttttccttttaatatattttatgagcagagagccaagaagaaatgggcagctcaaaga i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=810278.000000 s hg38.chr14_KI270725v1_random 164150 94 + 172810 tgttagaaatctggtaggcctgcatagac-aacaattggaattcatgactatcatggtggccagggc-ttgataaagggccggtagaaacaatgca s panTro5.chr1 126791367 94 + 228573443 ttttagaaatctgataggcctgcatagac-aaaaattggaattcatgactatcatggtggccagggc-ttgataaagggccagtagaaacaaaaca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402405 94 - 99763055 ttttagaaatctgataggcctgcatagac-aaaaattagaattcatgactatcatggtggccagggc-ttgataaagggccagtagaaacaaaaca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548741 94 + 121039945 ttttagaaatctgataggcctgcatagac-aaaaattagaattcatgactatcatggtggccagggc-ttgataaaGGGCCAGTAGAAACAAAACG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201484 91 - 169600520 ttttagaaatctgataggcct---tagac-aaaaatgggaattcatgactatcatggtggccagggc-ttgataaaggacctgtagaaataaaaca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879063 91 - 171882078 ttttagaaatctgataggcct---tagac-aaaaatgggaattcatgactatcatggtggccagggc-ttgataaaGGACCTGTAGAAATAAAACA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951845 91 + 40200012 ttttagaaatctgataggcct---tagac-aaaaatgggaactcatgactatcatggtggccagggc-ttgataaaGGACCTGTAGAAATAAAACA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397355 91 - 7633303 ttttagaaatctgataggcct---tagac-aaaaattggaattcatgactatcatggtggccagggc-ttgataaaGGACCTGTAGAAATAAAACA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194278 94 + 58131712 ttttagaaatctgatacgcctgcatagac-aaaaattggaattcaagactatcatggtggccagggc-ttgataaaGGGCCTGTAGAAATAAAACA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589502 91 - 2620224 ttttagaaatctgataggcct---tagac-aaaaattgtaattcgtgactatcatggtggccagggc-ttgataaaGGACCTGTAGAAATAAAACA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415115 93 - 10629787 ttttagaaatctgataggcctgcatagac--aaaattggaattcatgactatcatggtggccagggc-ttgataaaGGGCCTGTAGAAATAAAACA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997036 95 - 132174527 ttttagaattcttgtatgtctgcatagacaaaaaattggaattcatgactatcatggtggccagggc-ttgataaaGGGCCAATAGAAACAAAACT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10803992 96 + 21366645 ttttagaaatttcgtaggtctgcatagacaaaaaattggaattcatgactatcatggtggccagggctttgataaaGGGCCAATAGAAACAAAACT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313566 95 + 13033340 ttttagaaatctcgtaggtctgcatagacaaaaaattggaattcaggactatcatggtggccagggc-ttgataaaGGGCTAATAGAAACAAAACT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395413 95 - 11604778 ttttagaaatctcttaggtctgcatagacaaaaaactggaattcatgacTATCATGGTGGCCAGGGC-TTCATAAAGGGCCAATGGAAACAAAACT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26818257 89 - 40214260 GTATGCAAATCTCATAAGTCTACATAGACAAAAATTTGCAGTTCTTGCCTACCTAGGTGAccaggag----gtaaggggccaatagaagggaa--- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1071602 73 + 2868945 ttttggaaatctcataggaccgtgtagac-aagacttggaatt------------------aagggc-T---TATGGGGCCAATAGAAAAGAAATT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e tarSyr2.KE933570v1 97946 7045 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=8475.000000 s hg38.chr14_KI270725v1_random 164244 1 + 172810 a s panTro5.chr1 126791461 1 + 228573443 a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402499 1 - 99763055 a i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548835 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201575 1 - 169600520 c i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147879154 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951936 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397446 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194372 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589593 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415208 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997131 1 - 132174527 A i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804088 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313661 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395508 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 104991 1 + 145891 G i tarSyr2.KE933570v1 I 7045 I 465 s canFam3.chr30 26818346 1 - 40214260 a i canFam3.chr30 C 0 I 4 s dasNov3.JH579377 1071675 1 + 2868945 A i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=1348069.000000 s hg38.chr14_KI270725v1_random 164245 142 + 172810 tttcattttg------tttttccttcacagcattttctgattatttagctgcagaaggtgagcaactaagaagcttagcataaaatggagct-acctgactaaaaggaa--gttaagcagacctctcagcaaaagaatagacaa-aattgga s panTro5.chr1 126791462 142 + 228573443 tttcgttttg------tttttccttcacagcattttctgattctttagttgcagaaggtgaacaactaagaagcttagcataaaatggagct-atctgcctaaaaggag--gttaagcagacctctcagcaaaaggatagacaa-aattgga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402500 142 - 99763055 ttttgttttg------tttttccttcacagcattttctgattctttagttgcagaaggtgagcaactaagaagcttagcataaaatggagct-acccgattaaaaggaa--gttaagcagaccgctcagcaaaaggatagacaa-aatccga i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548836 134 + 121039945 TTTCGTTTTG------TTTTTCCTTCCCAGCATTTTCTGAT--------TGCAGAAGGTGAGCAACTAAGAAGCTTAGCATAAAATGGAGCT-ACCcgactaaaaggaa--gttaagcagacctctcagcaaaaggatagacaa-aattaga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201577 142 - 169600520 tttcattttg------tttttcctttacagcattttctgatcctttagttgcagaaggtgagcgattaagaagcttagcataaaatggagct-acccgactaaaaggaa--gttaaacagacttctcagcaaaaggatagacaa-aattgga i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147879155 142 - 171882078 TTTCATTTTG------TTTTTCCTTTACAGCATTTTCTGATCCTTTAGTTGCAGAAGGTGAGCGATTAAGAAGCTTAGCATAAAATGGAGCT-ACCcgactaaaaggaa--gttaaacagacttctcagcaaaaggatagacaa-aattgga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26951937 142 + 40200012 TTTCATTTTG------TTTTTCCTTTACAGCATTTTCTGATCCTTTAGTTGCAGAAGGTGAGCGATTAAGAAGCTTAGCATAAAATGGAGCT-ACCCGACTAAAAGgaa--gttaaacagacttctcagcaaaaggatagacaa-aattgga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397447 142 - 7633303 TTTCATTTTG------TTTTTCCTTTACAGCATTTTCTGATCCTTTAGTTGCAGAAGGTGAGTGATTAAGAAGCTTAGCATAAAATGGAGCT-ACCCGACTAAAAGgaa--gttaaacagacttctcagcagaaggatagacaa-aattgga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194373 142 + 58131712 TTTCTTTTTG------tttttccttcacagcattttctgatcctttagttgcagaaggtgagtgactaagaagcttagcataaaatggagct-acccgactaaaaggaa--gttaaacagacctctcagcaaaaggatagacaa-aattgga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589594 142 - 2620224 TTTCGTTTTG------TTTTTCCTTTACAGCATTTTCTGATCCTTTAGTTGCAGAAGGTGAGTGATTAAGAAGCTTAGCATAAAATGGAGCT-ACCCGACTAAAAGgaa--gttaaacagacttctcagcaaaaggatagacaa-aattgga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415209 142 - 10629787 TTTCATTTTG------TTTTTCCTTCACAGCATTTTCTGATCCTTTAGTTGCAGAAGGTGAGTGACTAAGAAGCCTAGCATAAAATGGAGCT-ACCCGACTAAAAGgaa--gttaaacagacctctcagcaaaaggatagacaa-aattgga i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997132 137 - 132174527 -----TTTTG------tttttccgtccaagcattttccgattctttagttgcagaaggtgagtgactaagaagcttagcataaaatggagct-acccgactaagacaaa--attaagcagacctatcagcaaaaggatagacaa-aattgga i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804089 137 + 21366645 -----TTTTG------tttttccttcaaagcattttctgattcttcagttgcagaaggtgagtgactaagaagcttagcataaaatggagct-acccgactaagacaaa--gttaagcagacctctcagcaaaaggatagacaa-aattgga i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313662 137 + 13033340 -----TTTTg------tttttccttcaaagcattttctgattctttagttgcagaaggtgggtgactaagaagcttagcataaaatggagct-gcccgactaagacaaa--gttaagcacacctctcagcaaaaggatagacaa-aattgga i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395509 137 - 11604778 -----TTTTg------tttttccttcaaagcattttctgattctttagttgcagaaggtgagtgactaagaagcttagcataaaATGGAGCT-ACCCAACTAAGACAAA--GTTAAGCAGACCTCTCAGCAAAAAGATAGACAA-AATTAGA i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26818351 132 - 40214260 tgacattctgtatgacttctcccctcaaaactttttctgattccctagttgcagagggtgagagagtaagaaac-------aaaacagctctcaactgactaaaaaaaaaggtta------------agcaaaaggataggcaa-aatttgg i canFam3.chr30 I 4 I 9 s dasNov3.JH579377 1071676 137 + 2868945 --CTGCATGA------CTTTTCCTTCAAAACTTTTTCTAACTCCTTTATTTCAGAGAGCGAGAGGCTAGAAAACCTAGTAGGAAATGGAGGT-A----AATGAAAAATA--GTCCAGCAGACTTGTCAGCAAAAAGAAGAacaacaattgga i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e tarSyr2.KE933570v1 104992 465 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=18805.000000 s hg38.chr14_KI270725v1_random 164387 3 + 172810 ggt s panTro5.chr1 126791604 3 + 228573443 gtt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402642 3 - 99763055 gtt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548970 3 + 121039945 gtt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201719 3 - 169600520 gtt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879297 3 - 171882078 gtt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952079 3 + 40200012 gtt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397589 3 - 7633303 gtt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194515 3 + 58131712 gtt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589736 3 - 2620224 gtt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415351 3 - 10629787 gtt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997269 3 - 132174527 gtt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804226 3 + 21366645 gtt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313799 3 + 13033340 gtt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395646 3 - 11604778 GTT i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 105457 2 + 145891 gc- i tarSyr2.KE933570v1 I 465 I 7054 s canFam3.chr30 26818492 1 - 40214260 g-- i canFam3.chr30 I 9 C 0 s dasNov3.JH579377 1071813 3 + 2868945 gtt i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=413911.000000 s hg38.chr14_KI270725v1_random 164390 44 + 172810 -------cagcaaggaacagaggacctagaaatctccctagg--cattgggac s panTro5.chr1 126791607 44 + 228573443 -------caacaaggaacagaggacctagaaatctccctagg--cattgagtc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402645 43 - 99763055 -------caacaa-gaacagaggacctagaaatctccctagg--cattgagat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53548973 44 + 121039945 -------caacaaggaacagaggacctagaaatctccctagg--cattgagac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201722 44 - 169600520 -------caacaaggaacagaggacctagaaatctccctagg--cattgagac i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879300 44 - 171882078 -------caacaaggaacagaggacctagaaatctccctagg--cattgagac i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952082 44 + 40200012 -------caacaaggaacagaggacgtagaaatctccctagg--cattgagac i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397592 44 - 7633303 -------caacaaggaacagaggacctagaaatctccctagg--cattgagac i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194518 44 + 58131712 -------caacaaggaacagaggacctagaaatctccctagg--caatgagac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589739 44 - 2620224 -------caacaaggaacagaggacctagaaatctccctagg--cattgagac i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415354 44 - 10629787 -------caacaaggaacagaggacctagaaatctccctagg--cattgagac i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997272 44 - 132174527 -------caacaaggaaccaaggacctagaaatctccctagg--cattgagac i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804229 44 + 21366645 -------cgacaaggaaccgaggaactagaaatctcccgagg--cattgagac i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313802 44 + 13033340 -------tgacaaggaaccgaggacctagaaatctccctagg--cattgagac i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395649 44 - 11604778 -------CAACAAGGAACAGAGGACCTAGAAATCTCCCTAGG--CATTGAGAC i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26818493 45 - 40214260 -------ctgccaagaa-agagggcctagggtgattcccaAGCCCATTAAGAT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1071816 49 + 2868945 caggtggagtcaaggagtt--ggatccaaggaagagcctaga--tattgagat i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=2011752.000000 s hg38.chr14_KI270725v1_random 164434 235 + 172810 ccct-aaaaagctaatccctacctgaaaaggcaaactagaaattcaccagctgccacaaagactgaaatctagcctcaaggcatttcag--tctgattggaccaaga-tgatctacctctaa-----------gccagaagaaaactacaatttctttggaggaagatcccatctaaagact-----ttttctcttaggtcaatatctggcttttgatcataa---------ataaccaggcgtatcagtcagcagggctaaat s panTro5.chr1 126791651 235 + 228573443 ccct-aaaaagctaatccctagctgaaaaggcaaactagaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tctgattggaccaaga-ggatctacctctaa-----------gccagaagaaaactacaatttctttggagggagatcccatctaaagact-----ttttctcttaggtcaatgtctggcttttgatcataa---------ataaccaggcatatcggtcagcagggctaaat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402688 235 - 99763055 ccct-aaaaagctaatccctagctgaaaaggcaaactagaaatgcaccagctgccacaagaactgaaatctagcctcaaggcatttcag--cctgattggatcaaga-ggatctacctctaa-----------gccagaagaaaactacaatttctttggagggagatcccatctaaagact-----ttttctcttaggtcaatgtctggcttttgatcataa---------ataaccaggcatatcagtcagcagggctaaat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549017 235 + 121039945 ccct-aaaaagataatccctagctgaaaaggcaaactagaaatgcaccagctgccacaaaaaccgaaatctagcctcaaagcatttcag--tctgattggaccaaga-ggatctacctctaa-----------gccagaagaaaactacaacttctttggagggagatcccatctaaagact-----ttttctcttaggtcaatatctggcttttgatcataa---------ataaccaggcatatcagtcagcagggctaaat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146201766 234 - 169600520 ccct--acaagctaatccctagctgaaaaggcaaactaaaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tctgattgcaccaaga-ggatctacctctaa-----------accataagaaaactacaacttctttggagggacatctcagctaaagact-----ttgtctcttaggtaactgtctggtttttgatcataa---------ataaccaggtatgtcagtcagcagggctaaat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879344 234 - 171882078 ccct--acaagctaatccctagctgaaaaggcaaactaaaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tctgattgcaccaaga-ggatctacctctaa-----------accataagaaaactacaacttctttggagggacatctcagctaaagact-----ttgtctcttaggtaaatgtctggtttttgatcataa---------ataaccaggtatgtcagtcagcagggctaaat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952126 239 + 40200012 ccct--acaagctaatccctagctgaaaaggcaaactaaaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tctgattgcaccaaga-ggatctacctctaa-----------accataagaaaactacaacttctttggagggacatctcagctaaagactttgtcttgtctcttaggtaaatgtctggtttttgatcataa---------ataaccaggtatgtcagtcagcagggctaaat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397636 234 - 7633303 ccct--acaagctaatccctagctgaaaaggcaaactgaaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tctgattggaccaaga-ggatctacctctaa-----------accgtaagaaaactacaacttctttggagggacatctcagctaaagact-----ttgtctcttaggtaaatgtctggtttttcatcataa---------ataaccaggtatatcagtcagcagggctaaat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194562 234 + 58131712 ccct--acaagcgaatccctagctgaaaaggcaaactaaaaatgcaccagctgccacaaaaactgaaacctagcctcaaagcatttcag--tctgattgcgccaaga-ggatctacctctaa-----------accacaagaaaactacaacttctttggagggacatcccagctaaagact-----ttttctcttaggtaaatgtctggtttttgatcataa---------ataaccaggtatatcagtcagcagggctaaat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2589783 234 - 2620224 ccct--acaagctaatccctagctgaaaaggcaaactaaaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tctgattggaccaaga-ggatctacctctaa-----------accgtaagaaaaatacaacttctttggagggacatcccagctaaagact-----ttgtctcttaggtaaatgtctggtttttggtcataa---------ataaccaggtgtatcagTCAGAAGGGTTAAAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415398 234 - 10629787 ccct--acaagctaatccctagctgaaaaggcaaactaaaaatgcaccagctgccacaaaaactgaaatctagcctcaaggcatttcag--tccgattggaccaaga-ggatctACCTCTAA-----------ACCGTAAGAAAACTACAACTTCTTTGGAGGGACATCCCAGCTAAAGAGT-----TTTTCTCTTAGGTAAATGTCTGGTTTTTGATCATAA---------ATAACCAGGTATATCAGTCAGCAGGGCTAAAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997316 234 - 132174527 ccct-aaaaagctaatccctagctgaaaaggcaaactagaaatgcaccggctgccactaaaactgaaatctagcttcaaggcatttcag--tctgattggaccaaga-ggatctggctctaa-----------gccagaagaaaattataacttctttggagggagatccaatctaaagact-----tttt-tcttaggtcagtgtgtggcttttgatcataa---------ataacaaggcatatcagtcagcagggctaaat i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804273 222 + 21366645 ccct-aaaaatctaacccctagctgaaaaggcaaactagaaatgcaccagctgccactaaaactgaagtctagcctcaaggc-------------attggaccaaga-ggatctggctctaa-----------gtcagaagaaaa-tgtaacttttttggagggagatCCAATCTAAAGACT-----TTTT-TCTTAGGTCAAAGTCTGGGTTTTGATCATAA---------ATAACAAGGCATATCAGTCAGCAGGGCTAAAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9313846 235 + 13033340 ccctaaaaaagctaatccttagctgaaaaggcaaactagaaatgcaccagctggcaataaaactgaaatctagcctcaagtcatttcag--tttgatgggaccaaga-gtgtctggctctaa-----------gccagaagaaaattgtaacttctttggagggagatccaatttaaagact-----tttt-tcttaggtcaatatctggcttttgatcataa---------ataacaaggcataacagtcagcagggctaaat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6395693 234 - 11604778 CCCT-AAAAAGCTAATCCCTAGCTGAAAAGGCAAACTAGAAATGCATCAGCTGCCACTAAAACTGAAATCTAGCCTTAAGGCATTTCAG--TCTGTTTGGACCAAGA-GGATCTGGCCCTAA-----------gccagaagaaaattataacttctttagagggagatccaatctaaagact-----tttt-tcttaggtcaatgtctggcttttgatcacaa---------ataacaaggcatatcagtcagcagggctaaat i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1071865 238 + 2868945 tcct-gaaagggtaatccatcgaagtaaaggcataagagaaattaaccagatctcacacagactgaaattcagcctcaaagaatctctgtctctgattggaccaagat-tatttgccccaaatctaataacctaccagaaggaaattacaactgccttggagg-------------aagaca----------tcatatgtcaatttctgacattcaattataaagtataattataaacaggcatatatg-cagcaggactcaat i dasNov3.JH579377 C 0 I 2051 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e canFam3.chr30 26818538 0 - 40214260 C e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=190434.000000 s hg38.chr14_KI270725v1_random 164669 36 + 172810 gaTGCA-----TGCACGCA--------------CATGCG----------------------CGTGCACA------CACAAAC----a s panTro5.chr1 126791886 36 + 228573443 gaTGCA-----TGCACACT--------------CATGTG----------------------TATGCACA------CACAAAC----a i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402923 45 - 99763055 gaTGCATGCAGTGCACACA--------------CATGCG----------------------TGTGCACA------CACACACAAAAa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549252 41 + 121039945 gaTGCATGCAATGCACACA--------------CATGCG----------------------CGTGCACA------CACACAC----A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202000 60 - 169600520 gaTGca-----tgcacata--------------cgtgagcgtgcacacgcacatacgtgaacgtgcaca----cgcacatac----a i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879578 60 - 171882078 gaTGca-----tgcacata--------------cgtgagcgtgcacacgcacatacgtgaacgtgcaca----cgcacatac----a i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952365 38 + 40200012 gaTGCA-----TGCACATA--------------CGTGAG----------------------CGTGCACA----CGCACATAC----a i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397870 38 - 7633303 gaTGCA-----TGCACATA--------------CGTGAG----------------------CGTGCACA----CGCACATAC----a i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194796 38 + 58131712 gaTGCA-----TGCACATA--------------CGTGAG----------------------CGTGCACA----CGCACATAC----a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590017 38 - 2620224 GATGCA-----TGCACATA--------------CGTGAG----------------------CGTGCACA----AGCACATAC----a i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415632 38 - 10629787 GATGCA-----TGCACATA--------------CGTGAG----------------------CGTGCACA----CACACATAC----A i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997550 50 - 132174527 gaTGCA-----CGCACACATGTTCATG------CATGTG----------------------CGTGcacgcacacacacacac----a i calJac3.chr10 C 0 I 14 s saiBol1.JH378136 10804495 56 + 21366645 GATGCA-----TGCACACATGTTCATGCGTGCACGTGTG----------------------CGCGcacacacacacacacac----a i saiBol1.JH378136 C 0 I 14 s cebCap1.NW_016107324v1 9314081 50 + 13033340 gaTGCA-----TGCACACATGTTCATGTGTGCGCATGTG----------------------TGTGCACG------CACACAC----A i cebCap1.NW_016107324v1 C 0 I 14 s aotNan1.NW_018501505v1 6395927 50 - 11604778 gaTGCA-----TGCACACACGTTCATG------CATGTG----------------------TGcatacgcgcacgcacacac----a i aotNan1.NW_018501505v1 C 0 I 29 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1072103 2051 + 2868945 I e canFam3.chr30 26818538 0 - 40214260 C e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=126144.000000 s hg38.chr14_KI270725v1_random 164705 19 + 172810 gagcgagagtgacagt--gag s panTro5.chr1 126791922 19 + 228573443 gagtgagagtgacagt--gag i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402968 19 - 99763055 gagcgagagtgacagt--gag i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549293 19 + 121039945 AAAAGAGAGTGACAGT--GAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202060 19 - 169600520 gagcgagagtgacggt--gag i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879638 19 - 171882078 gagcgagagtgacggt--gag i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952403 19 + 40200012 gagcgagagtgacagt--gag i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397908 19 - 7633303 gagcgagagtgacagt--gag i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194834 19 + 58131712 gagcgagagtgacagt--gag i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590055 19 - 2620224 gagcgagagtgacagt--gag i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415670 17 - 10629787 GAGC--GAGTGACAGG--GAG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997614 21 - 132174527 TAGTGAGAGTGACAGTGAGAG i calJac3.chr10 I 14 C 0 s saiBol1.JH378136 10804565 19 + 21366645 TAGTGCGAGTGACAGT--GAG i saiBol1.JH378136 I 14 C 0 s cebCap1.NW_016107324v1 9314145 19 + 13033340 TAGTGAGAGTGACAGT--GAG i cebCap1.NW_016107324v1 I 14 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1072103 2051 + 2868945 I e canFam3.chr30 26818538 0 - 40214260 C e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C e aotNan1.NW_018501505v1 6395977 29 - 11604778 I a score=189308.000000 s hg38.chr14_KI270725v1_random 164724 21 + 172810 agggagaggagaAATCTATAA s panTro5.chr1 126791941 21 + 228573443 agggagaggagaAATCTGTAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55402987 21 - 99763055 agggagaggagaAATCTATAG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549312 21 + 121039945 AGGGAGAGGAGAAATCTATAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202079 21 - 169600520 agggagaggagaAATCTATAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879657 21 - 171882078 agggagaggagaAATCTATAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952422 21 + 40200012 agggagaggagaAATCTATAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397927 21 - 7633303 agggagaggagaAATCTATAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194853 21 + 58131712 agggagaggagaAATCTATAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590074 21 - 2620224 agggagaggagaAATCTATAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415687 21 - 10629787 AGGGAGAGGAAAAATCTATGG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997635 21 - 132174527 AGAGAGAGGAGAAATCTATAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804584 21 + 21366645 AGGGAGAGGAGAAATCTATAG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314164 18 + 13033340 AGGGA---GAGAAATCTATAG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396006 21 - 11604778 AGGGAGAGGAGAAATCTATAG i aotNan1.NW_018501505v1 I 29 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1072103 2051 + 2868945 I e canFam3.chr30 26818538 0 - 40214260 C e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=481652.000000 s hg38.chr14_KI270725v1_random 164745 50 + 172810 CTTTAAATGTTCCCATGTACAGAAAATAAAAATACTTCCAAATATATTTA s panTro5.chr1 126791962 50 + 228573443 CTTTGAATGTTTTCATGTACAGAAAATAAAAATACTTCCAAATATATTTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403008 50 - 99763055 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTTA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549333 50 + 121039945 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202100 50 - 169600520 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879678 50 - 171882078 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952443 50 + 40200012 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397948 50 - 7633303 CTTTAAATGTTTCCATGAACAGAAAATAAAAATACTTCTAAATATATTCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194874 50 + 58131712 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTTA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590095 50 - 2620224 CTTTAAATGTTTCCATGTACAGAAAATAAAAATACTTCCAAATATATTCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415708 50 - 10629787 CTTTAAATGTTTTCATGTACAGAAAATAAAAATGCTTCCAAATATATTTA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997656 50 - 132174527 CTTTAAATGTTTCCATGTATAGAAAATAAGAATACTTCCAAATATACTTA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804605 50 + 21366645 CTTTAAATGTTTCCATGTATAGAAAATAAGAGTACTTCCAAATATATTTG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314182 50 + 13033340 CTTTAAATGTTTCTATGTATAGAAAATAAGAATACTTCCAAATATATTTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396027 50 - 11604778 CTTTAAATGTTTCCATGTATAGAAAATAAGAATACTTCCAAATACATTTA i aotNan1.NW_018501505v1 C 0 C 0 s dasNov3.JH579377 1074154 50 + 2868945 CTCAATACATTTCCAAGCATAGAAAATCAGAACACTTCAAAATCTATTTC i dasNov3.JH579377 I 2051 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e canFam3.chr30 26818538 0 - 40214260 C e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36220679 0 - 36342412 C a score=1840033.000000 s hg38.chr14_KI270725v1_random 164795 188 + 172810 TGAATAAATATTGTATTTATACTAAACTTGACCAAAGCTGAACATATGTGTTCTC---TTCCCATCCCTTTCCC-TTTGTCCCTCTCATATacactacacacaataaaatacaggcctattccactaataaatattactgcaaatattctatagctgtactttacaattaaaagttgcaatcccattaaaat s panTro5.chr1 126792012 188 + 228573443 TGAATAAATATTGTATTTATAGTAAACTTGACCAAAGCTGAACACATGTGTTCTC---TTCCCATCCCTTTCCC-TTCGTCTCTCTCATATACACTACACACAATAAAATACAGGCCTATTCCACTAATAAATATTACTACAAATATTCTAAATCTGTACTTTACAATTAAAAGTTGCAATCCCATTAAAAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403058 188 - 99763055 TGAATAAATATTGTATTTATACTAAACTTGACCAAAGCTGAACACATGTGTTCTC---TTCCCATCACTTTCCC-TTCATCTCCCTCATATacattacacacaataaaatacaggcctattccactaataaatattaatgcaaatattctaaaactgtactttacaattaaaagttgcaatcacattaaaat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549383 188 + 121039945 TGAATAAATATTGTATTTATACTAAACTTGACCAAAGCTGAACACATGTGTTCTC---TTCCCATCCCTTTCCC-TTCATCTCTCTCATATacattacacgcaataaaatacaggcctattccagtaataaatattaatgcaaatattctaaaaccatactttacaattaaaagttgcaatcacattaaaat i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202150 188 - 169600520 TGAATAAATATTGTATTTATACTAAACTTGACTAAAGTTGAACCCATGTGTTCTC---TTCCCATCCCCTTCCC-TTCATCTCTCTCATATACACTACACACAATAAAATACAGGCCTATCCCACTAATAAATATTAATGCAAATATTTTAAAACCATACCTTACAATTAAAAGTTGCAATCACATTAAAAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879728 188 - 171882078 TGAATAAATATTGTATTTATACTAAACTTGACTAAAGTTGAACCCATGTGTTCTC---TTCCCATCCCCTTCCC-TTCATCTCTCTCATATACACTACACACAATAAAATACAGGCCTATCCCACTAATAAATATTAATGCAAATATTTTAAAACCATACCTTACAATTAAAAGTTGCAATCACATTAAAAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952493 188 + 40200012 TGAATAAATATTGTATTTATACTAAACTTGACTAAAGTTGAACCCATGTGTTCTC---TTCCCATCCTCTTCCC-TTCATCTCTCTCATATACACTACACACAATAAAATACAGGCCTATCCCACTAATAAATATTAATGCAAATATTTTAAAACCATACCTTACAATTAAAAGTTGCAATCACATTAAAAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4397998 188 - 7633303 TGAATAAATATTGTATTTATACTAAACTTGACTAAAGTTGAACCCATGTGTTCTC---TTCCCATCCCCTTCCC-TTCATCTCTCTCATATACACTACACACAATAAAATACAGGCTTATCCCACTAATAAATATTAATGCAAATATTTTAAAACCATACCTTACAATTAAAAGTTGCAATCACATTAAAAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36194924 188 + 58131712 TGAATAAATCTTGTATTTATACTAAACTTGACTAAAGTTGAACCCATGTGTTCTC---TTCCCATCCCCTTCCC-TTCATCTCTCTCATATACACTACACACAATaaaatacaggcctatcccactaataaatattaatgcaaatattttaaaaccataccttacaattaaaagttgcaatcacattaaaat i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590145 188 - 2620224 TGAATAAATATTGTATTTATACTAAACTTGACTAAAGTTGAACCCATGTGTTCTC---TTCCCATCCCCTTCCC-TTCATCTCTCTCACATacactacacacaataaaatacaggcctatcccactaataaatattaatgcaaatattttaaaaccatacgttataattaaaagttgcaatcacattaaaat i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415758 189 - 10629787 TGAATAAATATTGTATTTATACTAAACTTGACTAAAGTTGAACCTACGTGTTCTC---TTCCCATCCCCTTCCCATTCATCTCTCTCATATacactacacacaataaaatacaggcctatcccactaataaatattaacgcaaatattttaaaaccataccttacaattaaaagttgcaatcacattaaaat i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997706 187 - 132174527 TAAAT-AATATTGTATTTATACTAAACTTGACCAAAGTTGAACACATGTGTTCTC---TTCCCATTCCCTTACC-TTCATCTCTCTTATATACATGACACACagtaaaatacaggcctataccactaataaatattaatgcaaatattctaaaaatgtattttataattcaaagttgcaatcacattaaaat i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804655 185 + 21366645 TAAAT-AATATTGTATTCATACTAAACTTGACCGAAGTTGAACGCATGTGTTCTC---TTCCCATTCCCTTCCC-TTCG--TCTCTTATatacatcacatgcagtaaaatacaggcctatcccactaataaatattaatgcaaatattctaaatatgtactttacaattaaaagttgcaatcacattaaaat i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314232 187 + 13033340 TAAAT-AATATTGTATTTATATTAAACTTGACCAAAGTTGAATGCATGTGTTCTC---TTCCCATTCACTTCCC-TTCATCTCTCTTATATACATCACacacaataaaatacaggcttatcccactaataaatattaatgcaaatattctaaaaatgtactttacaattaaaagttgcaatcacattaaaat i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396077 187 - 11604778 TAAAT-AATATTGTATTTATACTAAACTTGACCAAAGTTGAATGCATATGTTCTC---TTCCCATTCCCTTCCC-TTCATCTCTCTTATATACATCAAACACAATAAAATATAGGCCTATCCCACTAATAAATATTAATGCAAATATTCTAAAAATGTACTTTACAATTAAAAGTTGCAATCACATTAAAAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36220679 172 - 36342412 TGAGTAAACTCTGGATTTAAAATAAGCCTGATTAAATTTGAA--CATGAGTTCTT---TTCCTATGCCCACCCC-CTC--------------CACCATATGGAATAAAATACAGGCTTGTCTCACTTATGaatattaatacaaatattctaaaaatatattttataaGGAAAAGTTGGAATCAAATCTAAAC i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1074204 189 + 2868945 TGAATGGTTATTGTATTGACACCACACTTAACAAGAGTTGAACATACGTACTCTCTCTTTTCCTTCCCATTTCC-ATC-TTTCACGAACACacaccatgtacaaagaaatacaggcctatctc-tttatgaatattaacttgaacattctaaaaatatattttgtaattaaaagccacaagcacattaaaat i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e canFam3.chr30 26818538 0 - 40214260 C e tarSyr2.KE933570v1 105459 7054 + 145891 I a score=1923826.000000 s hg38.chr14_KI270725v1_random 164983 190 + 172810 catacttcataatcaagtagtgttcatgttagtaagcaagaatggatgactattaggaaatagtttacta---taatttatcatgttaat-------aga-------aaaaCAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAATAATATGAATAGAATAGTA-------------TTATAATGAGATC-------------------GATGTAATTTAACCCAAAATTCAG s panTro5.chr1 126792200 190 + 228573443 CGTACTTCATAATCAAGTAGCGTTCATGTTAGTAAGCAAGAATGGATGACTATTAGGAAATAGTTTACTA---TAATTTATCATGTTAAT-------AGA-------AAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAATAATATTAATAGAATAGTA-------------TTATAATGAGAGA-------------------GATGTAATTTAATCCAAAATTCAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403246 190 - 99763055 catacttcataatcaagtagtgttcacgttagtaagcaagaatggatgaccattaggaaatagtttacta---taatttatcatgataat-------aga-------aAAACAATA------ATCTCCAGAAACTTCAACATGTATTACCAATT-AAATAATATTAATAGAATAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCGAAAATTCAG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549571 190 + 121039945 catacttcgtaatcaagtagtgttcatgttaataagcaagaatggatgaccattaggaaatagtttacta---taatttatcatgttaat-------aga-------aAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAATAATATTAATAGAATAGTA-------------TTATAATGAGATA-------------------GACGTAACTTAACCCAAAATTCAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202338 183 - 169600520 CATACTTCATAATCAAGTAGTGTTCATGTTAGTAAGCAAGAATGGATGACTGTTAGGAAATACTTTACTA---T-ATTTATCATGTTAAT-------AGA-------AAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAAT------AATAGAGTAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCCAAAATTCAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147879916 183 - 171882078 CATACTTCATAATCAAGTAGTGTTCATGTTAGTAAGCAAGAATGGATGACTGTTAGGAAATACTTTACTA---T-ATTTATCATGTTAAT-------AGA-------AAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAAT------AATAGAGTAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCCAAAATTCAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952681 183 + 40200012 CATACTTCATAATCAAGTAGTGTTCATGTTAGTAAGCAAGAATGGATGACTGTTAGGAAATAGTTTACTA---T-ATTTATCATGTTAAT-------AGA-------AAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAAT------AATAGAGTAGTA-------------TTATAATGAGATT-------------------GATGTAATTTAACCCAAAATTCAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398186 184 - 7633303 CATACTTCATAATCAAGTAGTGTTCATGTTAGTAAGCAAGAATGGATGACTGTTAGGAAATACTTTACTA---TAATTTATCATGTTAAT-------AGA-------AAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAAT------AATAGAGTAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCAAAAATTCAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195112 184 + 58131712 catacttcataatcaagtagtgttcatgttagtaagcaagaatggatgactattaggaaatactttacta---taatttatcatgctaat-------aga-------aAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAGTT-AAAT------AATAGAGTAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCCAAAATTCAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590333 184 - 2620224 catacttcataatcaagtagtgttcatgttagtaagcaagaatggatgactgttaggaaatactttacta---taatttatcatgttaat-------aga-------aAAACAATA------ATCTCTAGAAACTTCAACATATATTACCAATT-AAAT------AATAGAGTAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCCAAAATTCAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8415947 184 - 10629787 catacttcataatcaagtagtgttcatgttagtaagcaagaatggatgactgttaggaaatactttacta---taatttatcatgttaat-------agA-------AAAACAATA------ATCTCCAGAAACTTCAACATATATTACCAATT-AAAT------AATAGAGTAGTA-------------GTATAATGAGATA-------------------GATGTAATTTAACCCAAAATTCAG i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107997893 188 - 132174527 catacttcataatcaagtagtgttcatattagtaagcaagaatggatgac--ttaggaaatactttatta---taatttatcatattaat-------agg-------aAAACAATA------ATCTTCAGAAACTTCAACATACATTACCAATT-AAATAATTTTAATAGAATAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCTAAAATTCAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10804840 188 + 21366645 catacttcataatcaagtagtgttcatattagtaagcaagaatggatgac--ttaggaaatattttgtta---tgatttatcatattaat-------agg-------aAAACAATA------ATCTTCAGAAACTTCAACATACATTACTAATT-AAATAATTTTAATAGAATAGTA-------------TTATGATGAGATA-------------------GATATAATTTAACCTAAAATTCAG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314419 185 + 13033340 catatttcataatcaagtagtattcatattaggaagcaagaatggATGAC--TTATGAAATACTTTATTA---TAATTT---ATATTAAT-------AGG-------AAAACAATA------ATCTTCAGAAACTTCAACATACATTACTAATT-AAATAATTTTAATAGAACAGTA-------------TTATAATGAGATA-------------------GATGTAATTTAACCTAAAATTCAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396264 188 - 11604778 CATACTTCATAATCAAGTAGTGTTCATATTCGTAAGCAAGAATGGATGAC--TTAGGATATACTTTATTA---TAATTTATCATATTAAT-------AGG-------AAAACAATA------ATCTTGAGAAACTTCAACATACATAACCAATT-ACATAATTTTAATAGAATAGTA-------------TTTTAATGAGATA-------------------GATGTAATTTAACCTAAAAGTCAG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36220851 194 - 36342412 CATACTTCATAATCACATGGTGTTCATATTGGTAAGCAAAAATGAATGATTATTGGGAAATACTTTA--------ATTGATTATGTTAAT-------AGATCGAAGCACATCAATGGTGGTTATCTTCAGAAATTTTACTCCACATTAGCCATT-AAATGATCTTAATAAAA---TA-------------CCATAATAAAATT--------------------ATGTAATTTGAACCAAATTTATA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26818538 233 - 40214260 CATACTTCATTATCAGGTGGAAGTCATA--AGTAAGTGAGAATGGGTGACTATTAGGAAATACTTTATTG---TCATTGACCATATTAATTCGTCAAAGG-------AAAATGATAGTGATCATTTTCAGAAACTTCAACCCTAATAACCCATT-AAATGATCTTAGCAGAATGGCAAGaaataatatatagataataaaatagaaaataaaaacaataaaaGAAGTAATTTAACCCAAATTTCAG i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1074393 197 + 2868945 tatactgcgtaatcaaatggtgttcatatcagaaagcaagaatggaagactactagaaaatactttaatacactaaattaataggtcaaa-------gga-------aaaatagtg---atcatctctagagaCTTCAACCCATATTACCAATTAAAATGCTCATAATAGAATGGTA-------------AGATAATAAGATA-------------------ATTGTAATTTAAATGAAAATTCAG i dasNov3.JH579377 C 0 I 6199 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e tarSyr2.KE933570v1 105459 7054 + 145891 I a score=24752.000000 s hg38.chr14_KI270725v1_random 165173 2 + 172810 AA s panTro5.chr1 126792390 2 + 228573443 AA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403436 2 - 99763055 AA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549761 2 + 121039945 AA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202521 2 - 169600520 AA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880099 2 - 171882078 AA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952864 2 + 40200012 AA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398370 2 - 7633303 AA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195296 2 + 58131712 AA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590517 2 - 2620224 AA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416131 2 - 10629787 AA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998081 2 - 132174527 AA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805028 2 + 21366645 AA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314604 2 + 13033340 AA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396452 2 - 11604778 AA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36221045 2 - 36342412 AA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26818771 2 - 40214260 AA i canFam3.chr30 C 0 I 4905 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1074590 6199 + 2868945 I e tarSyr2.KE933570v1 105459 7054 + 145891 I a score=62330.000000 s hg38.chr14_KI270725v1_random 165175 9 + 172810 TTTatgtga s panTro5.chr1 126792392 9 + 228573443 TTTatgtga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403438 9 - 99763055 TTTatgtga i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549763 9 + 121039945 TTTatgtga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202523 9 - 169600520 TTTAGgtga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880101 9 - 171882078 TTTAGgtga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952866 9 + 40200012 TTTAGgtga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398372 9 - 7633303 TTTAGgtga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195298 9 + 58131712 TTTAGCtga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590519 9 - 2620224 TTTAGgtga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416133 9 - 10629787 TTTAGgtga i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998083 9 - 132174527 TTTGtgtgt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805030 9 + 21366645 TTTatgtgt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314606 9 + 13033340 TTTatgtgt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396454 9 - 11604778 TTTatgtgt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36221047 9 - 36342412 CATATTTAA i otoGar3.GL873530 C 0 I 1344 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1074590 6199 + 2868945 I e canFam3.chr30 26818773 4905 - 40214260 I e tarSyr2.KE933570v1 105459 7054 + 145891 I a score=295255.000000 s hg38.chr14_KI270725v1_random 165184 32 + 172810 tggtgtttgggtacagggcctttgggaagtaa s panTro5.chr1 126792401 32 + 228573443 tggtgtttgggtacagggcctttgggaagtaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403447 32 - 99763055 tgatgtttgggtacagggcctttgggaagtaa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549772 32 + 121039945 tggtgtttgggtacagggcctttgggaagtaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202532 32 - 169600520 tggtgtttgggtacagggcctttgggaagtaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880110 32 - 171882078 tggtgttttggtacagggcctttgggaagtaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952875 32 + 40200012 tggtgtttgggtacagggcctttgggaagtaa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398381 32 - 7633303 tggtgtttgggtacagggcctttgggaagtaa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195307 32 + 58131712 tggtgtttgggtacagggcctttgggaagcaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590528 32 - 2620224 tggtgtttgggtacagggcctttgggaagtaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416142 32 - 10629787 tggtgtttgggtacagggcctttgggaagtaa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998092 32 - 132174527 tggtgtttggataggaggcctttgggaagtaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805039 32 + 21366645 tggtgtttggatacaggacctttgggaagtaa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314615 32 + 13033340 tggtgtttggatacaggacctttgggaaataa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396463 32 - 11604778 tggtgtttggatacaggacctttgggaagtaa i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1074590 6199 + 2868945 I e canFam3.chr30 26818773 4905 - 40214260 I e tarSyr2.KE933570v1 105459 7054 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=130014.000000 s hg38.chr14_KI270725v1_random 165216 14 + 172810 caaagtttagatga s panTro5.chr1 126792433 14 + 228573443 caaggtttagatga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403479 14 - 99763055 caaggtttagatga i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549804 14 + 121039945 caaggtttagatga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202564 14 - 169600520 caaggtttagatga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880142 14 - 171882078 caaggtttagatga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26952907 14 + 40200012 caaggtttagatga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398413 14 - 7633303 caaggtttagatga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195339 14 + 58131712 caaggtttagatga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590560 14 - 2620224 caaggtttagatga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416174 14 - 10629787 caaggtttagatga i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998124 14 - 132174527 catggtttagaggg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805071 14 + 21366645 caaggtttagagga i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314647 14 + 13033340 caaggtttagagga i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396495 14 - 11604778 caaggtttagacga i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 112513 14 + 145891 caaaattcatatgt i tarSyr2.KE933570v1 I 7054 I 4503 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1074590 6199 + 2868945 I e canFam3.chr30 26818773 4905 - 40214260 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=613640.000000 s hg38.chr14_KI270725v1_random 165230 81 + 172810 cgt----------------------------------------------------------------------------------------------catgagggcaggg-ttctcatgatggaattagttcccttataacatagacaccagagagcttgctctctttccctgcaa s panTro5.chr1 126792447 81 + 228573443 tgt----------------------------------------------------------------------------------------------catgagggcaggg-ttctcatgatggaattagttcccctataacatagacagtagagagcttgctctctttccctgcaa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403493 79 - 99763055 tgt----------------------------------------------------------------------------------------------catgagggcaggg-ttctcatgatggaattagttcccttataacatagacacc--agagcttgctctctttccctgcaa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549818 81 + 121039945 tgt----------------------------------------------------------------------------------------------catgagggcagag-ttctcatgatggaattagttcccttataacatagacaccagagagcttgatgtctttccctgcaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202578 81 - 169600520 tgt----------------------------------------------------------------------------------------------catgagggtaggg-ttctcatgacggaattaattctcttacaacatagacaccagagagcttgctctctttccctgcaa i rheMac8.chr7 C 0 I 94 s macFas5.chr7 147880156 81 - 171882078 tgt----------------------------------------------------------------------------------------------catgagggtaggg-ttctcatgacggaattaattctcttacaacatagacaccagagagcttgctctctttccctgcaa i macFas5.chr7 C 0 I 94 s macNem1.NW_012010577v1 26952921 81 + 40200012 tgt----------------------------------------------------------------------------------------------catgagggtaggg-ttctcatgatggaattaattctcttacaacatagacaccagagagcttgctctctttccctgcaa i macNem1.NW_012010577v1 C 0 I 94 s cerAty1.NW_012000887v1 4398427 81 - 7633303 tgt----------------------------------------------------------------------------------------------catgagggtaggg-ttctcatgatggaattaattctcttacaacatagacaccagagagcttgctctctttccctgcaa i cerAty1.NW_012000887v1 C 0 I 94 s chlSab2.chr26 36195353 175 + 58131712 tgtcatgagggtagggttctcatgatggaattaattctcttacaacacagacaccagagagcttgctctctttccctgcaatgtgaggacacagtgacatgagggtaggg-ttctcatgatggaattaattctcttataacacagacaccagagagcttgctctctttccctgcaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590574 81 - 2620224 tgt----------------------------------------------------------------------------------------------catgagggtaggg-ttctcatgatggaattaattctcttacaacatagacaccagagagcttgctctctttccctgcaa i manLeu1.NW_012108674v1 C 0 I 188 s colAng1.NW_012121598v1 8416188 81 - 10629787 tgt----------------------------------------------------------------------------------------------catgggggtaggg-ttctcatgatggaattaattctcttaaaacatagacaccagagagcttgctctctttccctgcag i colAng1.NW_012121598v1 C 0 I 94 s calJac3.chr10 107998138 78 - 132174527 tat----------------------------------------------------------------------------------------------catgaggcttggg-ctctcatgatgggattagttcccttataaca---acaccagagagcttgctgtctttccctgcaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805085 79 + 21366645 tgt----------------------------------------------------------------------------------------------catgagggttgggaatctcatgatggaattagttcccttataaca---acaccagagagcttgctgtctttccctgcag i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314661 78 + 13033340 tgc----------------------------------------------------------------------------------------------catgagggttgga-atctcatgacagaattagttcccttataaca---acaccagagagcttgctgtctttccctgcaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396509 78 - 11604778 tgt----------------------------------------------------------------------------------------------catgagggttggg-ctctcatgatggagttagttcccttataaca---acactagagagcttactgtctttccctgcaa i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1074590 6199 + 2868945 I e canFam3.chr30 26818773 4905 - 40214260 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=135948.000000 s hg38.chr14_KI270725v1_random 165311 15 + 172810 tgtgaggacagagtg s panTro5.chr1 126792528 15 + 228573443 tgtgaggacagagtg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403572 15 - 99763055 catgaggacagaatg i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549899 15 + 121039945 tgtgaggacagagtg i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202753 15 - 169600520 tgtgaggacagagtg i rheMac8.chr7 I 94 C 0 s macFas5.chr7 147880331 15 - 171882078 tgtgaggacagagtg i macFas5.chr7 I 94 C 0 s macNem1.NW_012010577v1 26953096 15 + 40200012 tgtgaggacagagtg i macNem1.NW_012010577v1 I 94 C 0 s cerAty1.NW_012000887v1 4398602 15 - 7633303 tgtgaggacagagtg i cerAty1.NW_012000887v1 I 94 C 0 s chlSab2.chr26 36195528 15 + 58131712 tgtgaggacagagtg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590843 15 - 2620224 tgtgaggacagagtg i manLeu1.NW_012108674v1 I 188 C 0 s colAng1.NW_012121598v1 8416363 15 - 10629787 tgtgaggacagagtg i colAng1.NW_012121598v1 I 94 C 0 s calJac3.chr10 107998216 15 - 132174527 tgtgaggacaaagtg i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805164 15 + 21366645 tgtgacgactgagtg i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314739 15 + 13033340 tgtgaggacagagtg i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396587 15 - 11604778 tatgaggacagagtg i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58122505 1830 - 182113224 I e dasNov3.JH579377 1074590 6199 + 2868945 I e canFam3.chr30 26818773 4905 - 40214260 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=1255413.000000 s hg38.chr14_KI270725v1_random 165326 160 + 172810 agagaacttgactgtctgcaagagaacgctcaccagatagcaaacattcacaggtcctgatcttggactttccagcctccagatgtg-taagaaaatacatttctgttta---aaccactcagtctgtggtattttgtgatggcagttcgagcagactaagaca s panTro5.chr1 126792543 157 + 228573443 agagaatttgactgtctgcaagagaatgctcaccagatagcaa---ttcacagatcctgatcttggactttccagcctccagatgtg-taagaaaatacatttctgttta---aaccactcagtctgtggtattttgtgatggcagttcgagcagactaagaca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403587 160 - 99763055 agagaacttgactgtctgcaagagaacgctcaccagatagcaaaccttcacagatcctgatcttggactttccagcctccagatgtg-taagaaaatacatttgtgttta---aaccactcagtctgtggtattttgtgatggcagttcgagcggactaagaca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53549914 160 + 121039945 agagaacttgactgtttgcaagagaatgctcaccagatagcaaaccttcacagatcctgatcttggactttcaagcctccagatgtg-taagaaaatacatttctgttta---aaccactcagtctgtggtattttgtgatggcagttcaagctgactaagaca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202768 152 - 169600520 agagaacctgactgtctgtaagagaacgctcaccagatagcaaaccttcacagatcctgatcctgtactttccagcctccagatgtg-taagaaaatacatttctgtggt-----------attctgtggtattttgtgatggcagttcgagcagactaagaca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880346 152 - 171882078 agagaacctgactgtctgtaagagaacgctcaccagatagcaaaccttcacagatcctgatcctgtactttccagcctccagatgtg-taagaaaatacatttctgtggt-----------attctgtggtattttgtgatggcagttcgagcagactaagaca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26953111 152 + 40200012 agagaacctgactgtctgtaagagaacgctcaccagatagcaaaccttcacagatcctgatcctgtactttccagcctccagatgtg-taagaaaatacatttctgtggt-----------attctgtggtattttgtgatggcagttcgagcagactaagaca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398617 148 - 7633303 agagaac----ctgtctgtaagagaacgctcaccagatagcgaaccttcacagatcctgatcttgtactttccagcctccagatgtg-taagaaaatacatttctgtggt-----------attctgtggtattttgtgatggcagttcgagcagactaagaca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195543 159 + 58131712 agagaacttga----ctgtaagagaatgctcaccagatagcaaaccttcacagatcctgatcctgtactttccagcctccagatgtg-taagaaaatacatttctgttgtttaaaccactcagtctgtggtattttgtgatggcagttcgagcagactaagaca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2590858 152 - 2620224 agagaacctgactgtctgtaagagaacgctcaccagatagcaaaccttcacagatcctgatcctgtactttccagcctccagatgtg-taagaaaatacatttctgtggt-----------attctgtggtattttgtgatggcagttcgagcagactaagaca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416378 159 - 10629787 agagaac----ctgtctgcaagagaatgctcaccagatagcaaaccttcacagatcctgatcctgtactttccagcctccagatgtg-taagtaaatacatttctgttgtttaaaccactcagtctgtggtattttgtgatggcagttcgagcagactaagaca i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998231 163 - 132174527 agataacttgactgtctgtaagagaacagtcaccgaataccaaaccttcacagctcttgatcttggactttccagcctccaggtgtg-taagaaaatacatttctgttgtttaaaccacgcagtgtgtgatatgttgtgatggcagtttgagcagactaagaca i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805179 158 + 21366645 aaataacttga----ctgtaagagaacagtcaccacatacc-aaccttcacagctctagatcttggactttccagcctccaggtgtg-taagaaaatacatttctgttgtttaaaccacacagtgtgtggtattttgtgatggcagtttgagcagactaagaca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314754 163 + 13033340 agataacttgactgtctgtaagagaacagtcaccaaataccaaaccttcacagctcttgatcttggactttccagcctccagatgca-taagaaaatacatttctgttgtttaaaccacacagtgtgtggtgttttgtgatggcagtttgagcagactaagaca i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396602 158 - 11604778 aga-----tgactgtctgtaagagaacagtcaccaaataccaaaccttcacagcccttgatcttggactttccagcctccaggtgtg-taagaaaatacatttctgttggttaaaccacacagtctgtggtattttgtgatggcagtttgagcagactaagaca i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58124335 156 - 182113224 AGAGACCCTGGCTACCTTCaggaaggtctccctgaaaacacctcctttcacag--ccagaactcaggct-----ggctttagacctactgggaaaacaaatctttgatgtttaaactacccagtgcctggtcttctgtgacagtagcatgagctagctaaGAA- i mm10.chr2 I 1830 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1074590 6199 + 2868945 I e canFam3.chr30 26818773 4905 - 40214260 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=171945.000000 s hg38.chr14_KI270725v1_random 165486 20 + 172810 AATAATG------------------ACACCATTCATGA s panTro5.chr1 126792700 20 + 228573443 AGTAATG------------------ACACCATTCATGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403747 20 - 99763055 AATAATG------------------ACACCATTCATGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53550074 20 + 121039945 AATAATG------------------ACACCATTCATGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202920 20 - 169600520 AATAATG------------------ACATCATTCATGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880498 20 - 171882078 AATAATG------------------ACATCATTCATGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26953263 20 + 40200012 AATAATG------------------ACATCATTCATGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398765 20 - 7633303 AATAATG------------------ACATCATTCATGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195702 20 + 58131712 AATAATG------------------ACACCATTCATGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2591010 20 - 2620224 AATAATG------------------ACACCATTCATGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416537 38 - 10629787 AATAATGACACCATTCAGAATAATAACACCATTCATGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998394 20 - 132174527 AATAATG------------------ACACCATCCATGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805337 20 + 21366645 AATAATG------------------ACACCATCCATGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314917 20 + 13033340 AATAATG------------------ACACCATCCAGGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396760 20 - 11604778 AATAATG------------------ACACCATCCATGA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58124491 16 - 182113224 ---AATG------------------ACACAAATC-TGC i mm10.chr2 C 0 C 0 s canFam3.chr30 26823678 20 - 40214260 AACCATG------------------ACAGAAAATCTGT i canFam3.chr30 I 4905 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1074590 6199 + 2868945 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=2099926.000000 s hg38.chr14_KI270725v1_random 165506 238 + 172810 TTGTTCCCATCTAC--CAGTCACCAAAACAAGTTCTAACAAGATTAAAAAATAAATTCCCCC-AAAACGTAAACTTAAAGCCTAAA-AATTAGAACAAATTGTAAATAAATATGAAAAATATAACTGGAGGCAATC-AAAAATATATAtatcctaaggag---attgttaaagctatat-gaaaaatgtatgctacaaatctcattggagcactattcataaatctaaataattgtaaataataact s panTro5.chr1 126792720 238 + 228573443 TTGTTCCCATCTAC--CAGTCACCAAAACAAGTTTTAACAAGATTAAAGAATAAATTCCCCC-AAAAGGtaaacttaaagcctaaa-aattataataaattgtaaataaagattaaaaataTAGCTGGAGGCAATC-AAAAAAATATATATCCTAAGGAG---ATTGTTAAAGCTATAT-GAAAAATGTAAGCTAAAAATCTCCTTGGAGCACTATTCATAAATCTAAATAATTGTAAATAATAACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55403767 237 - 99763055 TTGTTCCCGTCTAC--CAGTCACCAAAACAAGTTCTAACAAGATTAAAGAATAAATTCCCCC-AAAAGGTAAACTTCAAGCCTAAA-AATTAGAATAAATTGTAAATAAAGATTAAAAATATAACTGAAGGCAATC-AAAAA-ATATATAGCCTAAGGAG---ATTGTTAAAGCTATAT-GAAAAATGTATGCTAAAAATCTCATTGGAGCACTATTCATACATCTAAATAATTATAAATAATAACT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53550094 234 + 121039945 TTGTTCCCATCTAC--CAGTCACCAAAACAAGTTCTAACAAGATTAAAGAATAAATTCCCCC-AAAAGGTAAACTTGAAGCCTAAA-AATTAGAATACATTTTAAATAAAGATTAAAAATATAACTGGAGGCAATC-AAAAa---atatatcctaaggag---attgttaaagctatat-gaaaaatgtatgctaaaaa-ctcattggagcactattcataaatctaaataattataaataataact i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146202940 232 - 169600520 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATCAAAGAATAAACTCCCCC-AAAAGGTAAGCTTAAAGCAGAAA-AAGTAGAATAAATTGTAAATAAAGATTAAAAATATAACCAGAGGCAATC-AAAAa---atatatcctaaggag---attgttaaagctatat-gaaaaatgtatgccgaaaatctcattggagcactattcataaatctaaataattataaataact--- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880518 232 - 171882078 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATCAAAGAATAAACTCCCCC-AAAAGGTAAGCTTAAAGCAGAAA-AAGTAGAATAAATTGTAAATAAAGATTAAAAATATAACCAGAGGCAATA-AAAAa---atatatcctaaggag---attgttaaagctatat-gaaaaatgtatgccgaaaatctcattggagcactattcataaatctaaataattataaataact--- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26953283 232 + 40200012 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATCAAAGAATAAACTCCCCC-AAAAGGTAAGCTTAAAGCAGAAA-AAGTAGAATAAATTGTAAATAAAGATTAAAAATATAACCAGAGGCAATC-AAAAA---ATATATCCTAAGGAG---ATTGTTAAAGATATAT-GAAAAATGTATGCTGAAAATCTCATTGGAGCACTATTCATAAATCTAAATAATTATAAATAACT--- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4398785 232 - 7633303 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATCAAAGAATAAACTCCCCC-AAAAGGTAAGCTTAAAGCAGAAA-AAGTAGAATAAATTGTAAATAAAGATTAAAAATATAACCAGAGGCAATC-AAAAA---ATATATCCTAAGGAG---ATTGTTAAAGCTATAT-GAAAAATGTATGCTGAAAATCTCATTGGAGCACTATTCATAAATCTAAATAATTATAAATAACT--- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195722 233 + 58131712 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATGAAAGAAAAAACTCCCCC-AAAAGGTAAGCTTAAAGCAGAAA-AAGTAGAATACATTGTAAATAAAGATTAAAAATATAACTGGAGGCAATCAAaaaa---atatatcctaaggag---attgttaaagctatat-gaaaaatgtatgccgaaaatctcattggaacactattcataaatctaaataattacaaataact--- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2591030 233 - 2620224 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATGAAAGAATAAATTCCCCC-AAAAGGTAAGGTTAAAGCAGAAA-AAGTAGAATAAATTGTAAATAAAGATTAAAAATATAACTGGAGGCAATCAAAAAA---ATATATCCTAAGGAG---ATTGTTAAAGCTATAT-GAAAAATGTATGCCGAAAATCTCATTGGAGCACTATTCATAAATCTAAATAATTACAAATAACT--- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416575 232 - 10629787 TTGTTCCCATCTAC--CAGACACCAAAACAAGTTCTAACAAGATGAAAGAATAAACTCCCCC-AAAAGGTAAGCTTAAAGCAAAAA-AAGTAGAATAAATTGTAAATAAAGATTAAAAATATAACTGGAGGCAATC-AAAAA---ATATATCCTAAGGAG---ATTGTTAAAGCTACAT-GAAAAATGTATGCCGAAAATCTCATTGGAACACTATTCATAAATCTAAATAATTATAAATAACT--- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998414 226 - 132174527 TTGTTCCCATCCAC--CAGATACC----------CAAGCAATATTAAAGAATAAGTTCCCCCAAAAAGGTAAACTTAAAGCATAAA-AATTAGAACAAATTGTAAATAAAGATTAAAAATATAATTGGAGGCAAtc-aaaaa---atatatcctaaggag---attattaaagatatat-gaaaaatgaatgctaaaaacttcattgcagcactattcatagatctaaataattataaataataact i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805357 225 + 21366645 TTGTTCCCATCCAC--CAGATACC----------CAAACAATGTTAAAGACTAAGTTCCCCCGAAAAGGTAAACTTAAAGCataaa-aattagaataaattgtaaataaagtttaaaaa-attattGGAGGCAATC-AAAAA---GTAtattctaaggag---attattaaagatatat-gaaaaatgaatgctaaaaatttcattgcagcactattcatagatctaaataattataaataataact i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9314937 224 + 13033340 TTGTTCCCATCCAC--CAGATACC----------CAAACAATATTAAAGAATAAGTTCCCCC-AAAAGGTAAATTTAAAGCATAAA-AATTAGAATAAACTGTAAATAAAGATTAAAAATATAATTGGAGGCAATC--AAAA---GTAtatcctaaggag---attattaaagatatat-gaaaaatgaatgctaaaaatttcattgcagcactattcatagatctaaataattataaataataact i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6396780 225 - 11604778 TTGTTCCCATCCAC--CAGATACC----------CCAAAAATATTAAAGAATATGTTCTCCCCAAAAGGTAAACTTAAAGCATAAA-AATTAGAATAAATTTTAAATAAAGATTAAAAATATAATTGGAAGCAATC-AAAAA---ATATATCCT-AGGAG---ATTTTTAAAGATATAT-GAAAAATGACTGCTAAAAATTTCATTGCATCACTATTCATAGATCTAAATAATTATAAATAATAACT i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58124507 207 - 182113224 ATATTCTAA---------------------AACTCAGACAGCACTGAAGACCAAAA-CTCCC-ATAAAGCAAG-TTAAAACGTAAG-AATTAGAAAACGTCATCAATGAAAAATTA----ACAACTACAGGCAATT-AAAGA---A-GTATTGCCAGGAG---AATGTAAAAGATCTGTCTTAAAATGTTTGCTAACA---CCATTGCAGCAACTTTCAGGCACCAGAAGCATTTTAAGTGACAATT i mm10.chr2 C 0 C 0 s canFam3.chr30 26823698 233 - 40214260 TTTTTACTTTCAGC--CTAACACCCAAACAAATATCAATAGGATTAAAGAATAAATCTCCCC-AAAACCTAAACTTAAAGCATAAAGAATTAGAA----TTGTAAATGAAGATTCACAGTGTAATTTGAGGCAATCAAagaa---atatatcctaaggaa---attattggatttatat-taaaaatgtatgctaaagttctcattgtagcactattcataaatctaaaaagttaaacacagtgatt i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1080789 238 + 2868945 TTATCTTCATTTGCATCAAACACCCAAACAAATTCTGACAGCATTAAAGAACTAAATCTCAA-AAGAAGTAAACTTAAACATAAAG-AACTAGAAGAAATTG-AAGAGAAGATTCACAATACATCTGGAGACAACTAAAGAA---ATATATTGTAAGGAGGAAGTTATTAGAGATATATTTAAAAATatgtactagggttctcattgcagcattatcaatata---gaaaaaatgtaaataataatt i dasNov3.JH579377 I 6199 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5828449 2015 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=56444.000000 s hg38.chr14_KI270725v1_random 165744 5 + 172810 gggct s panTro5.chr1 126792958 5 + 228573443 GGGCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404004 5 - 99763055 GGGCT i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5830464 5 + 72422247 gggct i ponAbe2.chrUn I 2015 I 838 s nomLeu3.chr6 53550328 5 + 121039945 gggct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203172 5 - 169600520 gggct i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880750 5 - 171882078 gggct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26953515 5 + 40200012 GGGCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399017 5 - 7633303 GGGCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195955 5 + 58131712 gggct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2591263 5 - 2620224 GGACT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416807 5 - 10629787 GGGTT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998640 5 - 132174527 gagct i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805582 5 + 21366645 gagct i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315161 5 + 13033340 gagct i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397005 5 - 11604778 GAGCT i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58124714 3 - 182113224 --GTT i mm10.chr2 C 0 C 0 s canFam3.chr30 26823931 5 - 40214260 gtgtt i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1081027 5 + 2868945 ggggt i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=255553.000000 s hg38.chr14_KI270725v1_random 165749 22 + 172810 atggttatgttgattatggtaa s panTro5.chr1 126792963 22 + 228573443 ATGGTTATGTTGATTATGGTAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404009 22 - 99763055 ATGGTTATGTTGATTAAGGTAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53550333 22 + 121039945 atggttatgttgattaaggtaa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203177 22 - 169600520 atggttatgttgattatggtaa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880755 22 - 171882078 atggttatgttgattatggtaa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26953520 22 + 40200012 ATGGTTATGTTGATTATGGTAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399022 22 - 7633303 ATGGTTATGTTGATTATGGTAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195960 22 + 58131712 atggttatgttgattatggtaa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2591268 22 - 2620224 ATGGTTATGTTGATTATGGTAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416812 21 - 10629787 ATAGTTATGTTGATTAT-GTAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998645 22 - 132174527 atggttatattgattatggtaa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805587 22 + 21366645 atggttatattgattatggtaa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315166 22 + 13033340 atggttatattgattatggtaa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397010 22 - 11604778 ATGGTTATATTGATTATGGTAA i aotNan1.NW_018501505v1 C 0 C 0 s mm10.chr2 58124717 22 - 182113224 CTGGTTATATTGATATTGGTAC i mm10.chr2 C 0 C 0 s canFam3.chr30 26823936 22 - 40214260 atggttatgttgattatggtat i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1081032 22 + 2868945 atggttaagctgatcatagtgt i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36221056 1344 - 36342412 I a score=6782033.000000 s hg38.chr14_KI270725v1_random 165771 664 + 172810 atctatatatgttaacataatgtggtaatttgta-aatgtttataaagcattctt--gtatattagcaaaacaatttgaa-gtgtcaaattaaaaatcctgaatacaaaattacat-gtaagttataa-----ttccaagtatgtttgaaaaattgcataCCAAAATAATGGAAGTAAATGCAACAAACTATTCATAGTAGAATTTTATTTTACAGCAACTCAAAATAATG--AAACAAATCCTCTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTAGGTATTGTGATTTTCTTACTATTC----CATTCAGCAGGATATAGGTAGCATGGTTGTAT-TCTCAGTTTGTCAGtgttctcctggcatcattattaatagtgtccctatcactttcacaagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------ACCTAATTTTCTTCCTT-CTTCCCCAGTAATA-------------ATctatacaattctggacaactcacctatccataaaacaatttgatccgtaccttaaaatagat---a---tatc---tctgctagttaatttcatagaaatattgtaaggattaatgaggagatgcttggaaaacactttCAGCTCATCAGAGAAAAGTGCT-----ATGATATTGCCACTAATAAATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA s panTro5.chr1 126792985 664 + 228573443 ATCCATATATGTTAACATAATGTGGTAATTTGTA-AATGTTTATAAAGCATTCTT--GTATATTAGCAAAACAATATGAA-GTGTCAAATTAAAAATCCTGAATACAAAATTACAT-GTAAGTTATAA-----TTCCAAGTATGTTTAAAAAATTACATATTAAAATAATGGAAGTAAACGCAACAAACTATTCATAATAGAATTTTATTTTACAGCAACTCAAAATATTG--AAACAAATCCTCTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----ATTCAACTAGGTATTGTGATTTTCTTAATATTC----CATTCAGTAGGATATAGGTGGCATGGTTGTAT-tctcagtttgtcattgttctcctggcatcattattaatagtgtccctatcactttcacaagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------ACCTAATTTTCTTCCTT-CTTCCCCAGTAATA-------------ATATACACAATTCtggacaactcacctatccattaaacaatttgatctctaccttaaaatagat---a---tatc---tctgctagttaacttcatagaaatattgtaaggattaatgaggagatgcttggaaaatactttgagctcatcagagaaaagtgct-----atGATATTGCCACTAATAAATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404031 666 - 99763055 ATCCATATATGTTAACATAATGTGGTAATTTGTA-AATGTTTATAAAGCATTCTTA-GTATATTAGCAAAACAATTTGAA-GTGTCAAATTAAAAATCCTGAATACAAAATTACATGGTAAGTTATAA-----TTCCAAGTATGTTTGAAAAATTACATATTAAAATAATGGAAGTAAATGCAACAAACTATTTGTAGTAGAATTTTATTTTACAGCAACTCAAAATAATG--AAACAAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTAGGCATTGTGATTCTCTTACTATTC----CATTCAGTAGGATATAGGTAGCATGGTTGTAT-TCTCAGTTTGTCAGtgttctcctggcatcgttattaatagtgttcctatcactttcacaagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------ACCTAATTTTCTTCCTT-CTTCCCCAGTAATA-------------ATctatacaattctggacaactcacctatccataaaacaatttgatctctaccttaaaatagat---a---tatc---tctgctagttaacttcatagaaatattgtaaggattaatgaggagatgcttggaaaatacttagagctcatcagagaaaagtgct-----atGATATTGCCACTAATAAATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53550355 662 + 121039945 atccatatatgttcacataatgtggtaatttgta-aatgtttataaagcattgtta-gtatattagcaaaacaatttgaa-gtgtcaaattaaaaatcctgaatacaaaattacat-gtaagttataa-----ttccaagtatgtttgaaaaattacatatTAAAA-AATGGAAGTAAATGCAACAAACTATTTGT--TAGAATTTTATTTTACAGCAACTCAAAATAATG--AAACAAATCCTTTG----------------------------------------------------------GTTTAC----------------------------------------------------------------------------------AAC-----ATTCAACTAGGCATTGTGATTTTCTTACTATTC----CATTCAGTAGGATATAGGTAGCATGGTTGTAT-TCTCAGTTTGTCAGtgttctcctggcatcattattaatagtgtccctatcactttcacaagtttcctagtttgcagaataaat------------------tatatggttatc-cGAGATATGGGAA------ACCTAATTTTCTTCCTT-CTTCCCCAGTAATA-------------ATctatacaattctggacaactcacctatccataaaacaatttgatctctaccttaaaatagat---a---tata---tctgctagttaacgtcatagaaatattgtaaggattaataaggagatgcttggaaaatacttagagctcatcacagaaaagtgct-----atGATATTGCCACTAATAAATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203199 659 - 169600520 atccatatatgttaacataatgtgttaatttgta-aatgtttataaagcattctta-atatattagcaaaacagtttgaa-gtgtcaaattaaatatcctgaatacaaaattacat-gtaagttataa-----ttgcaagtatttttgaaaaattacatatTAAAAGAATGGAAGTAAATGCAACAAACTATTCGTAGTAGAATTTTATTTTACAACAACTCAAAATAACG------AAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAATTAGGCATTGTGATTTTCTTACTCTTC----CATTCAGTAGCATATAGGTAGCATGGTTGTAT-CTTCAGTTTCTCAGtgttctcctggcatcattattaatagtgtccccatcactttcataagtttcctagtttgcagaataaat------------------tacatggttatc-TGAGATATGGGAA------GCCTAATTTTCTTCTTT-CTTCCCCAGTAATA-------------ATCGATACAATTCTGGACAACTCACATATCCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---a---tatc---tc--ccagttaacgtcatagaaatattgtaaggattaatgaggagatgcttggaaaatactttgagctcatcagagaaaagtgct-----atGATATTGTCACTAATACATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147880777 659 - 171882078 atccatatatgttaacataatgtgttaatttgta-aatgtttataaagcattctta-atatattagcaaaacagtttgaa-gtgtcaaattaaatatcctgaatacaaaattacat-gtaagttataa-----ttgcaagtatttttgaaaaattacatatTAAAAGAATGGAAGTAAATGCAACAAACTATTCGTAGTAGAATTTTATTTTACAACAACTCAAAATAACG------AAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAATTAGGCATTGTGATTTTCTTACTCTTC----CATTCAGTAGCATATAGGTAGCATGGTTGTAT-CTTCAGTTTCTCAGtgttctcctggcatcattattaatagtgtccccatcactttcataagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------GCCTAATTTTCTTCTTT-CTTCCCCAGTAATA-------------ATCTATACAATTCTGGACAACTCACATATCCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---A---TATC---TC--CCAGTTAACGTCATAGAAATATTGTAAGGATTAATGAGGAGATGCTTGGAAAATACTTTGAGCTCATCAGAGAAAAGTGCT-----ATGATATTGTCACTAATACATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26953542 659 + 40200012 ATCCATATATGTTAACATAATGTGTTAATTTGTA-AATGTTTATAAAGCATTCTTA-ATATATTAGCAAAACAGTTTGAA-GTGTCAAATTAAATATCCTGAATACAAAATTACAT-GTAAGTTATAA-----TTGCAAGTATTTTTGAAAAATTACATATTAAAAGAATGGAAGTAAATGCAACAAACTATTCGTAGTAGAATTTTATTTTACAACAACTCAAAATAATG------AAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAATTAGGCATTGTGATTTTCTTACTCTTC----CGTTCAGTAGCATATAGGTAGCATGGTTGTAT-CTTCAGTTTCTCAGtattctcctggcatcattattaatagtgtccccatcactttcataagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------GCCTAATTTTCTTCTTT-CTTCCCCAGTAATA-------------ATCTATACAATTCTGGACAACTCACATATCCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---a---tatc---tc--ccagttaacgtcatagaaatattgtaaggattaatgaggagatgcttggaaaatactttgagctcatcagagaaaagtgct-----atGATATTGTCACTAATACATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399044 649 - 7633303 ATCCATATATGTTAACATAATGTGTTAATTTGTA-AATGTTTATAAAGCATTCTTA-ATATATTAGCAAAACAGTTTGAA-GTGTCAAATTAAATATCCTGAATACAAAATTGCAT-GTAAGTTATAA-----TTGCAAGTATTTTTGAAAAATTACATATTAAAAGAATGGAAGTAAATGCAACAAATTATTCGTAGTAGAATTTTATTTTACAACAATTCAAAATAATG------AAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTAGGCATTGTGATTTTCTTACTCTTC----CATTCAGTAGCATATAGGTAGCATGGTTGTAT-CTTCAGTTTCTCAGtgttctcctggcatcattattaatagtgtccccatcactttcataagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------GCCTAATT-----------TTCCCCAGTAATA-------------ATCTATACAATTCTGGACAACTCACATATCCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---A---TATC---TC--CCAGTTAACGTGATAGAAAGATTGTAAGGATTAATGAGGAGATGCTTGGAAAATACTTTGAGCTCATCAGAGAAAAGTGCT-----ATGATATTGTCACTAATACATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36195982 663 + 58131712 atccatatctgttaacataatgtgttaatttgta-aatgtttataaagcattctta-atatattagcaaaacagtttgaa-gtgtcaaattaaataccctgaatacaaaattactt-gtaagttgtaa-----ttccaagtatttttgaaaaattacatattaaaAGAATGGAAGTAAATGCAACCAACTATTTGTAGTAGAATTTTATTTTACAACAACTCAAAATAATG--AAACAAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAAGTAGGCATTGTGATTTTCTTACTATTC----CATTCAGTAGCATATAGGTAGCATGGTTGTAT-CCTCAGTTTCTCAGtgttctcctggcatcattattaatagtgtccctatcactttcataagtttcctagtttgcagaataaat------------------tatatggttatc-TGAGATATGGGAA------GCCTAATTTTCTTCTTT-CTTCCCCAGTAATA-------------ATCTATACAATTCTGGACAACTCATATATCCATAAAAAAATTTGATCTCTACCTTAAAATAGAT---A---TATC---TC--CCAGTTAACATCATAGAAAGATTGTAAGGATTAATGAGGAGATGCTTGGAAAATACTTTGAGCTCATCAGAGAAAAGTGCT-----ATGATATTGTCACTAATACATTTATTTAGTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2591290 659 - 2620224 ATCCATATATGTTAACATAATGTGTTAATTTGTA-AATGTTTATAAAGCATTCTTA-ATATATTAGCAAAACAGTTTGAA-GTGTCAAATTAAATATCCTGAATACAAAATTACTT-GTAAGTTGTAA-----TTCCAAGTATTTTTGAAAAATTACATATTAAAAGAATGGAAGTAAATGCAACAAACTATTCGTAGTAGAATTTTATTTTACAACAATTCAAAATAATG------AAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTAGGCATTGTGATTTTCTTACTCTTC----CATTCAGTAGCATATAGGTAGCATGGTTGTAT-CTTCAGTTTCTCAGtgttctcctggcatcattattaatagtgtccctatcactttcataagtttcctagtttgcagaataaat------------------tatatggctatc-TGAGATATGGGAA------GCCTAATTTTCTTCTTT-CTTCCCCAGTAATA-------------GTCTATACAATTCTGGACAACTCACATATCCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---G---TATC---TC--CCAGTTAACGTCATAGAAAGATTGTAAGGATTAATGAGGAGATGCTTGGAAAATACTTTGAGCTCATCAGAGAAAAGTGCT-----ATGATATTGTCACTAACACATTTATTTACTAGCTTGCTGAGTAGAAAGTCAAGGGAAATCAA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8416833 663 - 10629787 ATCCATATATGTTAACATAATGTGTTAATTTGTA-AATGTTGATAAAGCATTCTTA-ATATATTAGCAAAACAGTTTGAA-GTGTCAAATTAAATATCCTGAATACAAAATTACTT-GTAAGTTGTAA-----TTCCAAGTATTTTTGAAAAATTACATATTAAAAGAATGGAAGTAAATGCAACAAACTATTCGTAGTAGAATTTTATTTTACAACAACTCAAAATAATG--AAACAAATCCTTTG----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTAGGCGTTGTGATTTTCTTACTATTC----CATTCAGTAGCATATGGGTAGCATGGTTGTAT-CCTCAGTTTCTCAGtgttctcctggcatcattattaatagtgtccctatcactttcataagtttcctagtttacagaataaat------------------tatatggttatc-TGAGATATGGAAA------GCCTAATTTTCTTCTTT-CTTCCCCAGTAATA-------------ATCTATACAATTCTGGACAACTCATATATCCATAAAAAAATGTGATCTCTACCTTAAAATAGAT---A---TATC---TT--CCGGTTAACGTCATAGAAAGATTGTAAGGATTAATGAGGAGATGCTTGGAAAATACTTTGAGCTCATCAGAGAAAAGTGCT-----ATGATATTGTCACTAATACATTTATTTACTAGCTTGCTGAGTAGAAAGTCGAGGGAAATCAA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107998667 594 - 132174527 atccatataT-TTAACATAATGTGGTAATT-------TGTTTTTAAAGCATTCTTA-GTATATTAGCAAAAC---------------------------------------------------------------------ATTTTT--AAAAATACATATTAAAAGAATGAAAGTAAATGCAACAAACTATTTGCAGTAGAATTTTGTTTAACAGCAACTAGAACTAATG--AAACAAATCCTTGA----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AGC-----TTTCAACTGGGCATTGTGATTTTCTTACTATTT----CATTCAGTAGTATATAGGTAGCATGGCTGTAT-tctcagtttgtgaatattttcctggcataattattaatagtgcctctatagctttcacaagttttctagtttgcagaataaat------------------tatatTGGTATC-TCAGACATgggaa------acctaattttcttcctt-cttctccagtaaca-------------agttatacaattctggacaactcacctattcacaaaagaatttggtctctaccttaaaatagat---a---tatc---tctgctggctaacttcatagaaatgttgtaaggattaatgaggagatacttggaaaatagtttgAGCTCATCAGAGAAAAGCGCT-----ATGATATTGCCACTAATACCTTTATTTAATAGCTTGCTGAGTAGAAAGTTGAGGGAAATCAA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10805609 663 + 21366645 atccatatat-ttaacataatgtggtaatttata-aatgtttataaagcattctta-gtatattagcaaaacgtgttgaa-gtgtcaaattaaacatcctgaatacaaaattacat-gtaagttataa-----ttccaagtatttttgaaaaaatacatattaaaAGAATGAAAGTAAATGCAACAAACTATTTGCAGTAGAATTTTGTTTAACAGCAACTAGAAATAATG--AAACAAAT-CGTGA----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTGGGCATTGTGATTTTCTTACTATTC----CATTCAGTAGTATACAGGTAGCATGGTTATAT-TCTCAGTTGGTGAGtattttcctggcataattattaatagtgcctctataactttcacaagtttcctagtttgcaaaataaat------------------tacattgttaTT-TCAGACATgagaa------acctaattttcatcctt-cttctccagtaaca-------------atttatacaattctggacaactcacctattcataaaagaatttgatctctaccttaaaatagat---a---tatc---tctgctggctaacttcatagaaatgttgtaaggattaatgaggagatacttggaaaatagtttgagctcataagagaaaagtgct-----atGACATTGCTACTAATACCTTTATTTACTGTCTTGCTGAGTAGAAAGTTGAGGGAAATCAA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315188 664 + 13033340 atccatatat-ttaacataatgtggtaatttgta-aatgtttataaagcattctta-gtatattagcaaaacattttgaa-gtgtcaaattaaacatcctgaatacaaaattacat-gtgagttataa-----ttccaagtatttttgaaaaaatacatattaaaAGAATGAAAGTAAATGCAACAAACTATTTTCAGTAGAGTTTTATTTAACAGCAACTAGAAATAATG--AAACAAATCCTTGA----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACTGGGCATTATGATTTTCTTACTATTC----CATTCAGTAGTATATAGGTAGCATGGTTGTAT-TCTCAGTTGGTGAGtattttcctagcataattattaatagtgcctctatagctttcacaagtttcctggtttgcagaataagt------------------tatattgttatc-TCAGACATGGGAA------ACCAAATTTTCGTCCTT-CTTCTCCAGTAACA-------------ATTTATACAATTCTGAACAACTCACCTATTCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---A---TATC---TCTGCTGGCTAACTTCATAGAAATGTTGTAAGGGTTAATGAGCAGATACTTGGAAAATAGTTTGAGCTCATCAGAGAAAAGTGCT-----ATGATATTGCCACTAATACCTTTATTTACTAGCTTGCTGAGTAGAAAGTTGAGGGAAATCAA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397032 662 - 11604778 ATCCATATAT-TTAACATAATGTGGTAATTTGTA-AACATTTAT-AAGCATTCTTA-GTATATTAGCAAAACATTTTGAA-GTGTCAAATTAAACATCCTGAATACAAAATTACAT-GTAAGTTATAA-----TTCCAAGTATTTTTGAAAAAGTACATATTAAAAGAATGAAAGTAAACGCAA-AAACTATTTGCAGTAGAATTTTGTTTAACAGCAACCAGAAATAATG--AAACGAATTCTTGA----------------------------------------------------------GCTTAC----------------------------------------------------------------------------------AAC-----TTTCAACAGGGCATTGTGATTTTCTTACTATTC----CATTCAGTAGTATATAGGTAGCACGGTTGTAT-TCTCAGTTGGTGAGtgttttcctggcataattattaatagtgcttctatagttttcacaagtttcctagtttgcagaataaat------------------tatattgttatc-TCAGACATGGGAA------ACCTAATTTTCTTCCTT-CTTCTCCAGTAACA-------------ATTTATACAATTCTGGACGACTCACCTTTTCATAAAAGAATTTGATCTCTACCTTAAAATAGAT---A---TATC---TCTGCTGGCTAACTTCATAGAAATGTTGTAAGGCTTAATGAGGAGATACTTGGAAAATAGTTTGAGCTCATGAGAGAAAAGTGCT-----ATGATATTGCCACTAATACCTTTATTTACTAGCTTGCTGAGTAGAAAGTTGAGGGAAATCAA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36222400 718 - 36342412 ATCCATAACTTTTAAAAC-ATTTGATAATGTTTG-AAAGTTTATAAAGCATTTTAA-GTATATTGGGAAACAAG--TGAT-GTGTCGAATTAAAAATTCTGAACACGACATTATAT-GTAAGGTATAA-----TTTCAACTATTTTTGAAAAAGTACACAGCAAAAG-ATTAAAGTAAATGTAACAAACTATTAATAGTGGGATTTTATTTTGTAATAATTCAAAATAAAG--AAGTAAGTCCTTTG----------------------------------------------------------CTGTACTACTTATGTTCATATATATATTCTTTATATGAGCAAGCTCCCTATTTTTATCC-TAAAC-------------------CTCTGAC-----TTTCAACTAAGCATTGTGGTTTATTAGTATTTC----CATTCAGCGTGATATAGGTAGGGTGACGGTATGTCACAGTTTATGA-TAGTGCCCTGACATAGCTA-------TGCCCTTTCTATTTTCACAAGTTTTTGAGTTTGGAGGCTAAAT------------------TTTACAGATATC-TAAGATATAGGAA------ACCTAATTTTCTTCCCT-ATTTTCCATTGACA-------------TTCTACCCAATTCTGGATAAGTTACCTCTTCAAAGAAAAATATGAtccttactacaaagtagataaaa---tatc---tctgctggttgacttcacaggaatgtttcgaggattaatgaggagatgcctgaaaaatagtttgAGCTCCTCAGAGAAAAGTGCA-----ATGATATTGTCACTAATATGTCT-CTTACTCGCCTACAGAATGGGCAGTCCAGGGAAATCAA i otoGar3.GL873530 I 1344 C 0 s mm10.chr2 58124739 683 - 182113224 AGCCATAGATTTTAAGATAATGCAATAATTTA-A-AACATTTATGAAGCACATTTAGGTGTATAAGGAAAA--GTTTAAT-GTGTCAAA-TAAAAATTCTGGATACTAAATAATTT-GCAAGGCATGC-----TACTAAGGGCATTTGGAATATTATGTAGCAAAATACTAAAAT--AATTCAGCAAACTCTTAGTTCTAGATTTTTCTTTCCAAGAAGTT----GTAATG--ATACAAATCTATTGTGTCCTATTTATTTTCATTCAGGGATTGTTAACATGAGTAAATTTGATAATTTTGTGTTCTTAA----------------------------------------------------------------------------------ATCATTGATTTCAACAAGAAACTATGATTTGGATATTGTTA----TCTTAAGAGAGACATAGGTAGGGTGAACCTAAGTATCTGTTTGTGATCATTGAC----CATAATTTCTGATATAGAATCTTTCATTTTCATAGTTTTCCAAGTTTAAAGAAACAATTATTTATATTACCTATTATATGTAGTTATAGTTAAATATATGAATGAAACCCCTGATTCTTTTGCTT-TT----CAATTTtgtgtgtgtgtgtgtgtgtgCATATATATAGGCAGATCTTCTGTCTGTGGAAAATTTTGATC--TATTGCAATGTAGAC---A---AAAC---CT---------------------GACTGTA-------------AGATGCTT-------------AACTCCTCAGAGGACAGTGATCCCACATTAGATCGTCCC------ATTCTTGTCCTAGC-----------------AAGGGAAATCAA i mm10.chr2 C 0 C 0 s canFam3.chr30 26823958 718 - 40214260 attcatatcttggaacataatgtgatcatttttt-aaagtttctaaggcattttta-gtaaattagaaaaattttttgat-gtgtcaaattaaaaattctggatacttaattacat-ataaagtataa-----tttcaactattttctgaaaaatgcatGGTACAGGACTAAAAGTAAATGCAGC-AGCTCTTAGTAGTAGAATTCTATTTTATAATAGT--GAAATAATG--AAGCAAGTCCTTTG----------------------------------------------------------ACTTACTATTTATGTTCTTACACATTTTCTCTTTACCAATACATTCAATATTTATGGCT-TAAAC-------------------CAATGAC-----TTCCTACTAGGCATTGTGGCTTTGTCGCTATTC----CATTCAGTGGGCTATAGGTAGAGTGTCTGTATGTTTCAGCTTCTGActattgtcctggcataattattaatagtgcccttttcactttaata-gtgccctagtttggacaatgaat------------------tatatggttatc-cAAGATATgggaa------acctgattctcatcctg-tttatccattgaaa-------------acctacaaaattcgggatacatcatctatccatgagagattttcatccctgccctaaaatagaa---atagtatc---tctgctggttaacttcataggaatgctttgaggattaatg---------ttggaaaatactttgagctcctcagagaaaagtgct-----atGATATTGTTACTGTTATATTTCTCTACTAGCTTGCCATATGGGAAGTCAGGGGAAATCAA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1081054 730 + 2868945 atccatattctgggacataatgtggtaattaaaaTAATGTTTGGGAAACAATTTTA-TTAAATCAGGGAAATAATTTTAATGAGTCAAATTAAATAT-CTGAATACTAAATTATAT-GTAAATAGTAATATTTTTTCAAATATTTTC-AAAGATTACATAGCAAAAGACTAACAGTAAATGTAACAAACT------GGTAGAATTTTATTTTAGAGAAACTCAAAATAATTTTTTAAAAGTCCTTTG----------------------------------------------------------GCTTAC-------------TAATATTGTGCTTAGGTTCCTATACATAGTCTCTATGTCAGTAAACTCAATATTTGCATCTTAATCCATGGA-----TTTTTGCTGGGCAT-----CTTTATTGCTATTCTGTTCATTCAGTGGGATATAGGTAGGGTGGCCAAATGTCTCAGTTTATGACTGTTATCATGCCCTAATTATTAATA------ctttccctttgaaaagtatcctaatttggataataaat------------------tatatagttatt-cAACATGcaggaa------acctaattctcttctctgcttttccactgata-------------acccacagaattctgtacaaatcatttacccttccaca---ttgatctctactgtgtgatagaa---a---taacatgtctgcgggttatcttcataggaatgctgtgaggattaatgaggagatgcttggaaaatattttgagctcctcagagagaagtgct-----atgatattgttactattACATTTCTCTACTGGTTCGCCAAGTGGGAAATCAAGGGAAATCAA i dasNov3.JH579377 C 0 M 1207 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=469288.000000 s hg38.chr14_KI270725v1_random 166435 38 + 172810 GATTTTGTAGGTATCAGCAACAAAACCAAATCAATCAT s panTro5.chr1 126793649 38 + 228573443 GATTTTGTGGGTATCAGCGACAAAACCAAATCAATCAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404697 38 - 99763055 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551017 38 + 121039945 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203858 38 - 169600520 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881436 38 - 171882078 GATTTTGTGGGTATCAGCAACAAAACCAAATCAAGCAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954201 38 + 40200012 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399693 38 - 7633303 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36196645 38 + 58131712 GATTCTGTGGGTATCAGCAACAAAACCAAATCAATCAT i chlSab2.chr26 C 0 I 42 s manLeu1.NW_012108674v1 2591949 38 - 2620224 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417496 38 - 10629787 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107999261 38 - 132174527 AATTTTGTGAGTATCAGCAACAAAACCAAATCAATCGT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806272 38 + 21366645 GATTTTGTGGGTATCAGCAACAAAATCAAATCAATCAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315852 38 + 13033340 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397694 38 - 11604778 GATTTTGTGGGTATCAGCAACAAAACCAAATCAATCAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223118 38 - 36342412 GATTGTGTGAGTATCAGCAATGAAACCAAATCAATCAA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125422 38 - 182113224 GGTTTTATAAGGCTCAGCAGAGAGACCAAATAAGTCTT i mm10.chr2 C 0 C 0 s canFam3.chr30 26824676 38 - 40214260 GATTTTGCAAGTATCAGCAACGAAACCAGATCAATCAA i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=104105.000000 s hg38.chr14_KI270725v1_random 166473 11 + 172810 CCATGTTCTGG s panTro5.chr1 126793687 11 + 228573443 GCATGTTCTGG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404735 11 - 99763055 GCATGTTCTGG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551055 11 + 121039945 GCATGTTCTGG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203896 11 - 169600520 GCACGTTCTAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881474 11 - 171882078 GCACGTTCTAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954239 11 + 40200012 GCACGTTCTAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399731 11 - 7633303 GCACGTTCTAG i cerAty1.NW_012000887v1 C 0 C 0 s manLeu1.NW_012108674v1 2591987 11 - 2620224 GCACGTTCTAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417534 11 - 10629787 GCACATTCTGA i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107999299 11 - 132174527 GCATGTTCTGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806310 11 + 21366645 GCATGTTCTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315890 11 + 13033340 GAATGTTCTGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397732 11 - 11604778 GCATGTTCTGA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223156 11 - 36342412 ACATGTTCTGG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125460 11 - 182113224 ACATGCTCTGA i mm10.chr2 C 0 C 0 s canFam3.chr30 26824714 11 - 40214260 GCATGTTCTGG i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I e chlSab2.chr26 36196683 42 + 58131712 I a score=566796.000000 s hg38.chr14_KI270725v1_random 166484 74 + 172810 CAGCCTATTTTATATAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAAGAAAAAA---AAATAT s panTro5.chr1 126793698 71 + 228573443 CAACCCATTTTATATAAGTTCCCCAGAGT-ACAGTAGCTAGTTAACATAGAACTTCTCCAAA---AAAA---atataa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404746 72 - 99763055 CAGCCCATTTTATATAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAat--atat---atatat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551066 66 + 121039945 CAGCCCATTTTATATAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAA-----------TATAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203907 76 - 169600520 CAGCCCATTTTATGTAAGTTCCACAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAatacatacat-atatat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881485 74 - 171882078 CAGCCCATTTTATGTAAGTTCCACAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAatacatac---atatat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954250 74 + 40200012 CAGCCCATTTTATGTAAGTTCCACAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAatacatac---atatat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399742 74 - 7633303 CAGCCCATTTTATGTAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAatacatac---acatat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36196725 74 + 58131712 CAGCCCATTTTATGTAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAatacatat---atatat i chlSab2.chr26 I 42 I 10 s manLeu1.NW_012108674v1 2591998 74 - 2620224 CAGCCCATTTTATGTAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAATACATAC---ATATAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417545 66 - 10629787 CAGCCCATTTTATGTAAGTTCCCCAGAGT-ACAGTAGCTAGTGAACATAGAACTTCTCCAAATATAT----------- i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 107999310 58 - 132174527 TAGCCCATTTTATGTAAGTTGCCCAGAGT-ACAGTAGCTAGTAAAC--AGAACTTCTACAA----------------- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806321 58 + 21366645 CAGCCCATTTTATGTAAGTTCCCCAGAGT-GCAGTAGCTAGTTAAC--AGAACTTCTACAA----------------- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315901 58 + 13033340 CAGCCCATTTTATGTAAGTTCCCCAGAGT-ACAGTAGCTAGTGAAC--AGAACTTCTGCAA----------------- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397743 60 - 11604778 CAGCCCATTTTATGTAAGTTCCCCAGACT-ACAGTAGCTAGGGAACATAGAACTTCTACAA----------------- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223167 60 - 36342412 CAGCACATTTTACATAAGTGCCCCAGAGT-ACAGAATCTAGTGAACCCAGAATTCCTCCAA----------------- i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125471 71 - 182113224 CAGTCCATATTCCATAAATGCCCCAGAGTCACAGT--CAAGTGGAC-TCCAAATTCT-CAAATGTACAAGCGATA--- i mm10.chr2 C 0 C 0 s canFam3.chr30 26824725 59 - 40214260 CAGCACATTTTATACAAGTGCCCCAGAGT-ATGAGATCTAGTGAACCTAAAATTCCTCCA------------------ i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=36456.000000 s hg38.chr14_KI270725v1_random 166558 10 + 172810 ATATATATAT s panTro5.chr1 126793769 10 + 228573443 atatatatat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404818 10 - 99763055 atatatatat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551132 10 + 121039945 ATATATATAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146203983 10 - 169600520 atatatatat i rheMac8.chr7 C 0 I 8 s macFas5.chr7 147881559 10 - 171882078 atatatataa i macFas5.chr7 C 0 I 8 s macNem1.NW_012010577v1 26954324 10 + 40200012 atatatataa i macNem1.NW_012010577v1 C 0 I 8 s cerAty1.NW_012000887v1 4399816 10 - 7633303 atatatatat i cerAty1.NW_012000887v1 C 0 I 8 s manLeu1.NW_012108674v1 2592072 10 - 2620224 ATATATATAA i manLeu1.NW_012108674v1 C 0 I 6 s colAng1.NW_012121598v1 8417611 10 - 10629787 ATATATATAT i colAng1.NW_012121598v1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824784 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10806379 0 + 21366645 C e otoGar3.GL873530 36223227 0 - 36342412 C e aotNan1.NW_018501505v1 6397803 0 - 11604778 C e cebCap1.NW_016107324v1 9315959 0 + 13033340 C e calJac3.chr10 107999368 0 - 132174527 C e chlSab2.chr26 36196799 10 + 58131712 I a score=84109.000000 s hg38.chr14_KI270725v1_random 166568 18 + 172810 GAACATAAAACTTCTCCa s panTro5.chr1 126793779 18 + 228573443 gaacatataacttctcca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404828 18 - 99763055 GAACATAGAACTTCTCCa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551142 18 + 121039945 GAACATAGAACTTCTCCa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204001 18 - 169600520 gaacatagaacttctcca i rheMac8.chr7 I 8 C 0 s macFas5.chr7 147881577 18 - 171882078 gaacatagaacttctcca i macFas5.chr7 I 8 C 0 s macNem1.NW_012010577v1 26954342 18 + 40200012 gaacatagaacttctcca i macNem1.NW_012010577v1 I 8 C 0 s cerAty1.NW_012000887v1 4399834 18 - 7633303 gaacatagaacttctcca i cerAty1.NW_012000887v1 I 8 C 0 s chlSab2.chr26 36196809 18 + 58131712 ggacatagaacttctcca i chlSab2.chr26 I 10 C 0 s manLeu1.NW_012108674v1 2592088 18 - 2620224 GAACATAGAACTTCTCCA i manLeu1.NW_012108674v1 I 6 C 0 s colAng1.NW_012121598v1 8417621 17 - 10629787 -AACGTAGAACTTCTCCA i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36223227 3 - 36342412 ---------------CCA i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26824784 12 - 40214260 -AACATACAAATT----- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5830469 838 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10806379 0 + 21366645 C e aotNan1.NW_018501505v1 6397803 0 - 11604778 C e cebCap1.NW_016107324v1 9315959 0 + 13033340 C e calJac3.chr10 107999368 0 - 132174527 C a score=26270.000000 s hg38.chr14_KI270725v1_random 166586 6 + 172810 tatata s panTro5.chr1 126793797 6 + 228573443 tatata i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404846 6 - 99763055 tatata i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5831307 6 + 72422247 catata i ponAbe2.chrUn I 838 I 27 s nomLeu3.chr6 53551160 6 + 121039945 tatata i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204019 6 - 169600520 aataca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881595 6 - 171882078 aataca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954360 6 + 40200012 aataca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399852 6 - 7633303 aataca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36196827 6 + 58131712 aataca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592106 6 - 2620224 AATACA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417638 6 - 10629787 AATATA i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36223230 6 - 36342412 TATAGA i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10806379 0 + 21366645 C e aotNan1.NW_018501505v1 6397803 0 - 11604778 C e cebCap1.NW_016107324v1 9315959 0 + 13033340 C e calJac3.chr10 107999368 0 - 132174527 C a score=-17174.000000 s hg38.chr14_KI270725v1_random 166592 8 + 172810 tgt------------atata s panTro5.chr1 126793803 2 + 228573443 ta------------------ i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404852 3 - 99763055 ta-----------------a i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551166 18 + 121039945 --tattttatatatgatata i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204025 4 - 169600520 ----------------tata i rheMac8.chr7 C 0 I 4 s macFas5.chr7 147881601 4 - 171882078 ----------------tata i macFas5.chr7 C 0 I 6 s macNem1.NW_012010577v1 26954366 4 + 40200012 ----------------tata i macNem1.NW_012010577v1 C 0 I 97 s cerAty1.NW_012000887v1 4399858 4 - 7633303 ----------------tata i cerAty1.NW_012000887v1 C 0 I 4 s chlSab2.chr26 36196833 4 + 58131712 ----------------tata i chlSab2.chr26 C 0 I 4 s manLeu1.NW_012108674v1 2592112 4 - 2620224 ----------------TATA i manLeu1.NW_012108674v1 C 0 I 39 s colAng1.NW_012121598v1 8417644 4 - 10629787 ----------------TATA i colAng1.NW_012121598v1 C 0 I 20 s otoGar3.GL873530 36223236 1 - 36342412 ------------------T- i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831313 27 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10806379 0 + 21366645 C e aotNan1.NW_018501505v1 6397803 0 - 11604778 C e cebCap1.NW_016107324v1 9315959 0 + 13033340 C e calJac3.chr10 107999368 0 - 132174527 C a score=5584.000000 s hg38.chr14_KI270725v1_random 166600 2 + 172810 ta s panPan2.chr15 55404855 2 - 99763055 ta i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551184 2 + 121039945 ta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204033 2 - 169600520 ta i rheMac8.chr7 I 4 I 2 s macFas5.chr7 147881611 2 - 171882078 ta i macFas5.chr7 I 6 I 2 s cerAty1.NW_012000887v1 4399866 2 - 7633303 ta i cerAty1.NW_012000887v1 I 4 I 91 s chlSab2.chr26 36196841 2 + 58131712 ta i chlSab2.chr26 I 4 I 6 s manLeu1.NW_012108674v1 2592155 2 - 2620224 TA i manLeu1.NW_012108674v1 I 39 I 12 s colAng1.NW_012121598v1 8417668 1 - 10629787 -A i colAng1.NW_012121598v1 I 20 I 3 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831313 27 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10806379 0 + 21366645 C e otoGar3.GL873530 36223237 0 - 36342412 C e aotNan1.NW_018501505v1 6397803 0 - 11604778 C e cebCap1.NW_016107324v1 9315959 0 + 13033340 C e calJac3.chr10 107999368 0 - 132174527 C e macNem1.NW_012010577v1 26954370 97 + 40200012 I e panTro5.chr1 126793805 0 + 228573443 C a score=-1656.000000 s hg38.chr14_KI270725v1_random 166602 6 + 172810 tata---ta s panPan2.chr15 55404857 6 - 99763055 taca---ta i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551186 9 + 121039945 tatatttta i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204037 4 - 169600520 tata----- i rheMac8.chr7 I 2 I 49 s macFas5.chr7 147881615 4 - 171882078 aata----- i macFas5.chr7 I 2 I 22 s chlSab2.chr26 36196849 4 + 58131712 aata----- i chlSab2.chr26 I 6 I 22 s manLeu1.NW_012108674v1 2592169 4 - 2620224 AATA----- i manLeu1.NW_012108674v1 I 12 I 22 s colAng1.NW_012121598v1 8417672 4 - 10629787 TATA----- i colAng1.NW_012121598v1 I 3 I 27 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831313 27 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10806379 0 + 21366645 C e otoGar3.GL873530 36223237 0 - 36342412 C e aotNan1.NW_018501505v1 6397803 0 - 11604778 C e cebCap1.NW_016107324v1 9315959 0 + 13033340 C e calJac3.chr10 107999368 0 - 132174527 C e cerAty1.NW_012000887v1 4399868 91 - 7633303 I e macNem1.NW_012010577v1 26954370 97 + 40200012 I e panTro5.chr1 126793805 0 + 228573443 C a score=1977.000000 s hg38.chr14_KI270725v1_random 166608 8 + 172810 tatatata s panTro5.chr1 126793805 4 + 228573443 ---atat- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404863 8 - 99763055 tatatata i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551195 8 + 121039945 tatatata i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147881641 8 - 171882078 tacataca i macFas5.chr7 I 22 C 0 s chlSab2.chr26 36196875 8 + 58131712 tacataca i chlSab2.chr26 I 22 C 0 s manLeu1.NW_012108674v1 2592195 8 - 2620224 TACATACA i manLeu1.NW_012108674v1 I 22 C 0 s colAng1.NW_012121598v1 8417703 8 - 10629787 TAAGTATA i colAng1.NW_012121598v1 I 27 C 0 s calJac3.chr10 107999368 3 - 132174527 ---ATA-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806379 3 + 21366645 ---ATA-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315959 3 + 13033340 ---ATA-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397803 3 - 11604778 ---ATA-- i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831313 27 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36223237 0 - 36342412 C e cerAty1.NW_012000887v1 4399868 91 - 7633303 I e macNem1.NW_012010577v1 26954370 97 + 40200012 I e rheMac8.chr7 146204041 49 - 169600520 I a score=25384.000000 s hg38.chr14_KI270725v1_random 166616 10 + 172810 tatatataAA s panTro5.chr1 126793809 10 + 228573443 tatatataat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404871 7 - 99763055 tatatat--- i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5831340 10 + 72422247 tgtacataAA i ponAbe2.chrUn I 27 I 40 s nomLeu3.chr6 53551203 7 + 121039945 tatatat--- i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147881649 10 - 171882078 tatatatgta i macFas5.chr7 C 0 I 4 s chlSab2.chr26 36196883 10 + 58131712 tatatatata i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 2592203 10 - 2620224 TATATATGTA i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 8417711 10 - 10629787 TATATATATA i colAng1.NW_012121598v1 C 0 I 49 s calJac3.chr10 107999371 7 - 132174527 TATATAT--- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806382 7 + 21366645 CATATAT--- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315962 7 + 13033340 TATATAT--- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397806 7 - 11604778 TATATAT--- i aotNan1.NW_018501505v1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36223237 0 - 36342412 C e cerAty1.NW_012000887v1 4399868 91 - 7633303 I e macNem1.NW_012010577v1 26954370 97 + 40200012 I e rheMac8.chr7 146204041 49 - 169600520 I a score=-8401.000000 s hg38.chr14_KI270725v1_random 166626 9 + 172810 ATTAGAAAA s panTro5.chr1 126793819 9 + 228573443 attaGAAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404878 1 - 99763055 --------a i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551210 3 + 121039945 ------ata i nomLeu3.chr6 C 0 C 0 s calJac3.chr10 107999378 1 - 132174527 --------A i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806389 1 + 21366645 --------A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315969 1 + 13033340 --------A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397813 1 - 11604778 --------A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223237 1 - 36342412 --C------ i otoGar3.GL873530 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831350 40 + 72422247 I e rhiBie1.NW_016805531v1 2344332 12867 + 4596561 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26824796 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e colAng1.NW_012121598v1 8417721 49 - 10629787 I e manLeu1.NW_012108674v1 2592213 1 - 2620224 I e chlSab2.chr26 36196893 1 + 58131712 I e cerAty1.NW_012000887v1 4399868 91 - 7633303 I e macNem1.NW_012010577v1 26954370 97 + 40200012 I e macFas5.chr7 147881659 4 - 171882078 I e rheMac8.chr7 146204041 49 - 169600520 I a score=10424.000000 s hg38.chr14_KI270725v1_random 166635 1 + 172810 A s panTro5.chr1 126793828 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404879 1 - 99763055 G i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551213 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147881663 1 - 171882078 a i macFas5.chr7 I 4 C 0 s macNem1.NW_012010577v1 26954467 1 + 40200012 a i macNem1.NW_012010577v1 I 97 C 0 s cerAty1.NW_012000887v1 4399959 1 - 7633303 a i cerAty1.NW_012000887v1 I 91 C 0 s chlSab2.chr26 36196894 1 + 58131712 a i chlSab2.chr26 I 1 I 3 s manLeu1.NW_012108674v1 2592214 1 - 2620224 A i manLeu1.NW_012108674v1 I 1 I 3 s colAng1.NW_012121598v1 8417770 1 - 10629787 A i colAng1.NW_012121598v1 I 49 C 0 s rhiBie1.NW_016805531v1 2357199 1 + 4596561 a i rhiBie1.NW_016805531v1 I 12867 C 0 s calJac3.chr10 107999379 1 - 132174527 A i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806390 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315970 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397814 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223238 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26824796 1 - 40214260 A i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831350 40 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125542 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I e rheMac8.chr7 146204041 49 - 169600520 I a score=284651.000000 s hg38.chr14_KI270725v1_random 166636 30 + 172810 TTAGAGACACATAGGCTAAATTTTGACTCT s panTro5.chr1 126793829 30 + 228573443 TTAGAGACACATAGGCTAAATTTTGACTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404880 30 - 99763055 TTAGAGACACATAGGCTAAATTTTGACTCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551214 30 + 121039945 TTAGAGACACATAGGCTAAATTTTGACTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204090 28 - 169600520 tTAGAGA--CACAGGTTAAATTTTGATTCT i rheMac8.chr7 I 49 C 0 s macFas5.chr7 147881664 28 - 171882078 tTAGAGA--CACAGGTTAAATTTTGATTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954468 28 + 40200012 tTAGAGA--CACAGGTTAAATTTTGATTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399960 28 - 7633303 tTAGAGA--CACAGGTTAAATTTTGATTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36196898 27 + 58131712 -CAGACA--CATAGGTTAAATTTTGACTCT i chlSab2.chr26 I 3 C 0 s manLeu1.NW_012108674v1 2592218 28 - 2620224 TTAGAGA--CACAGGTTAAATTTTGATTCT i manLeu1.NW_012108674v1 I 3 C 0 s colAng1.NW_012121598v1 8417771 30 - 10629787 TTAGAGATCCATAGGTTAAATTTTGACTCT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357200 30 + 4596561 tTAGAGACACATAGGTTAAATTTTAACTCT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999380 30 - 132174527 TTAAAGACATGTAGGCAGAATTTTGACTCC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806391 30 + 21366645 TTAAAGTCATGTAGGCAGAATTTTGATTCC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9315971 30 + 13033340 TTAAAGACATGTAGGCAGAATTTTGACTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397815 30 - 11604778 TTAAAGACATGTAGGCAGAATTTTGACTCC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223239 30 - 36342412 TTAGAGACATGTAGGCTACATTTTGTCTCC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125542 25 - 182113224 ----AGACACATAGGTTACA-TTTGAGTCT i mm10.chr2 C 0 I 1 s canFam3.chr30 26824797 30 - 40214260 CTAGAGACATATAGACTAAATTTTGATCCT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831350 40 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=13365.000000 s hg38.chr14_KI270725v1_random 166666 1 + 172810 A s panTro5.chr1 126793859 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404910 1 - 99763055 A i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5831390 1 + 72422247 G i ponAbe2.chrUn I 40 I 144 s nomLeu3.chr6 53551244 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204118 1 - 169600520 A i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881692 1 - 171882078 A i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954496 1 + 40200012 A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399988 1 - 7633303 A i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36196925 1 + 58131712 A i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592246 1 - 2620224 A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417801 1 - 10629787 A i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357230 1 + 4596561 A i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999410 1 - 132174527 A i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806421 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316001 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397845 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223269 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26824827 1 - 40214260 A i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58125567 1 - 182113224 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=1871677.000000 s hg38.chr14_KI270725v1_random 166667 144 + 172810 TATAGGCTATTCAGTTAGCAGTTATGAGTAAATGTATTGAACTTCTCTTTCTTAGTGAAAATATTATGTTAGTTCAAGCACTGACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC s panTro5.chr1 126793860 143 + 228573443 TATAGGCTATTCAATTAGCAGTTATGAGTAAATGTATTGAACTTCTCTTTTTT-GTGAAAACATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACATATC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55404911 144 - 99763055 TATAGGCTATTCAGTTAGCAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGGTGAAAATATTGTGTTCCATCAAACACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551245 144 + 121039945 TATAGGCTATCCAGTTAGCAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGGTGAAAATATTGTGTTCCATCAAGCGATAACCATATGGAATTTTTGGAAGTTGAACAAAGACTGTTTATT--AAGCAAGAAAGGGACAGATC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204119 144 - 169600520 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGATGCAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATC--AAGCTTGAAAGGGACAGATC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881693 144 - 171882078 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGATGCAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATC--AAGCTTGAAAGGGACAGATC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954497 144 + 40200012 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGATGCAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4399989 144 - 7633303 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATGGAACTTCTCATTCTTGATGCAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36196926 144 + 58131712 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGAAGAAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592247 144 - 2620224 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGAAGAAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417802 144 - 10629787 TATAGGCTATTCAGTTAGTAATTATGAGTAAATGTATTGAACTTCTCATTCTTGATGAAAAGATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357231 144 + 4596561 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTATTGAACTTCTCATTCTTGATGAAAATATTGTGTTCCATCAAGCACTAACCATATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATC i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999411 144 - 132174527 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTACTGAACTTCTCATTCTTGGTGAAAATATTGTGTTTCATCAAGTACTAACCTAATGGAATGTTCAGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806422 143 + 21366645 TATAGGCTATTCAGTTAGTAGTTATGAGT-AATGTACTGAGCTTCTCATTCTTGGTGAAAATATTGTGTTCCATCAAGTACTAACCGTGTGGAATGTTCGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGAGG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316002 143 + 13033340 TATAGGCTATTCAGTTATTAGTTATGAGT-AATGTACTGAACTTCTCATTCTTGGTGAAAATATTGCGTTCCATCGAGTACTAACCGTATGGAATGTTTGGAAGTTGAACAAAGACTGTTCATT--AAGCTTGAAAGGGACAGATG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397846 144 - 11604778 TATAGGCTATTCAGTTAGTAGTTATGAGTAAATGTACTGAACTTCTCATTCTTGGTGAAAATACTGTGTTCCATCAAATACTAACCGTATGGAATGTTCGGAAGTTGAACCAAGACTGTTCATT--AAGCTTGAAAGGGACAGATG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223270 144 - 36342412 CATAGGCTACTCAATCAAGAGTTAAGAGTAAATGTATTGAATTTCTCTTTCTTGGTGAATGCATAGTGTTCCATCAAGTACTAACCATATGGAATGTTCGAAAGCTGAAGGAAGACTGGTCATG--AAGCTTAAAAGTGACAGATC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125568 143 - 182113224 TACAGGTGATTCAATTAAGAGTTATCTGTGAGTGCATTGTGCTTTTCTCCGTTGGTGAAAACATTGTGCTCCATCAAATGCTAACCATGTGGAAGCTTTAGAAGCTGGACAAAGAC-ATTCATT--AAGGTTGAAAGCCAGGCTTC i mm10.chr2 I 1 C 0 s canFam3.chr30 26824828 146 - 40214260 AATTGGCTATTCAATTAGGAGTTTTGAGTAAATATATTGAATTTCCCTTTCTGGGTGAAAATATTGTGCTCTATCAAGTATTAACCATAAGGAGTATTTGGAAGCTGAACAAAGACTGTTCATTAAAAGCTTGAAAGAGACAGATC i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831391 144 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=33801.000000 s hg38.chr14_KI270725v1_random 166811 2 + 172810 TG s panTro5.chr1 126794003 2 + 228573443 TG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405055 2 - 99763055 TG i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5831535 2 + 72422247 TG i ponAbe2.chrUn I 144 I 497 s nomLeu3.chr6 53551389 2 + 121039945 TG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204263 2 - 169600520 TG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881837 2 - 171882078 TG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954641 2 + 40200012 TG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400133 2 - 7633303 TG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197070 2 + 58131712 TG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592391 2 - 2620224 TG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417946 2 - 10629787 TG i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357375 2 + 4596561 TG i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999555 2 - 132174527 TG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806565 2 + 21366645 TG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316145 2 + 13033340 TG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6397990 2 - 11604778 TG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223414 2 - 36342412 TG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125711 2 - 182113224 TA i mm10.chr2 C 0 C 0 s canFam3.chr30 26824974 2 - 40214260 TG i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=3706901.000000 s hg38.chr14_KI270725v1_random 166813 298 + 172810 AGCCAGCC-TGCACTTTGTAAC-TGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTTTTTAGAAACTCAGTGGAAAGGTGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGTACTAAAATATCCTTCTTGAACTAA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAACGGGGCAGATTAAACTTGTAGCAATGA-ATCCGAAATACACAGGAGCCTTAGTTTGATTAAGATG s panTro5.chr1 126794005 298 + 228573443 AGCCAGCC-AGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAAATTTTTAGAAACTCAGTGGAAATGTGGCATCTTC---AT---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATTTACTTCTCAG-CAACAAAGAAGCAGATGAAAGGCAACAACGGGGCAGATTAAACTTCTAGCAATGA-ATCCCAAATATTCGGGAGCCTTAGTTTGATTAAGATG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405057 299 - 99763055 AGCCAGCC-AGCACTTTGTAAACTGCCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCATTGGAAAGGTGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGAACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCGATAAATCAATCTACTTCTCAGGTGACAAAGAAGCAGATGAAAGGCAACAACAGGGCAGATTAAACTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATTAAGATG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551391 297 + 121039945 AGCCAGCC-AGCACTTTGTAACCTGCCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAAGTGGCATCTTC---AC---AC---ATTTTCAGCACCT--TAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCGATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAATGGGGCAGATTAAACTTCTAGCAATGA-ATCCCAAATATACAGGAACCTTAGTTTGATTAAGATG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204265 300 - 169600520 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATCAAGATG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147881839 300 - 171882078 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATCAAGATG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954643 300 + 40200012 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACGACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATCAAGATG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400135 300 - 7633303 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAACGAGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATCAAGATG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197072 300 + 58131712 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTTGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTTCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTTTCAGGCAACAAAGAGGCAGATGAAAGGCAACAACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATTAAGATG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592393 289 - 2620224 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTTAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTC-----------AGGCAGATGAAAGGCAACAACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATCAAGATG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8417948 301 - 10629787 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTCAAAAATCAAGCCTATTATTTTAGCAGGCCAATTAAGTTCTTCAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGATACTTTTGCCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATTAAGATG i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357377 300 + 4596561 AGCCAGCCAAGCACTTTGTAACCTGGCAGTCAGGCCTC-AAAATCAAGCCTATTATTTTAGTAGGCCAATTAAGTTCTTCAGAAACTCAGTGGAAAGATGGCATCTTC---AC---AC---ATTTTCAGCACCTTATAAATTAGGTACTTTTGCCTGGCACTAAAATATCCTTCTTGAATTTA---------AAAATCAAAATCAATAAATCAATCTACTTCTCAGGCAACAAAGAAGCAGATGAAAGGCAACAACGGGGCAGATTAAAGTTCTAGCAATGA-ATCCCAAATATACAGGAGCCTTAGTTTGATTAAGATG i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999557 299 - 132174527 AGCCAGCC-AGCACTTTGTAACCTGGCAGTAAGGCCTC-AAAATCAAACCTATTATTTTAGTAGGCCAATTAAGTTCCTTAGAAACTCAGTGGAAAGGTGGCATCTTC---AC---AC---ATTTTAGGCATCTTATAAATTGGGTACCTTTGCCTGGCACTAAAATATCCTTCTTGAATTTA---------AAAATAAAAATCAATAAATCAATTTACTTCTCAGTCAACAGAGAAGCAGATGAAAGGCAATAACGGGGCAGATTAAAGTCCTAGCAATGC-ATTCCAAATATACAGGAGCCTTAGTTTGATTAAGATG i calJac3.chr10 C 0 I 2 s saiBol1.JH378136 10806567 299 + 21366645 AGCCAGCC-AGCACTTTTTAACCCGGCAGTAAGGCCTC-AAAATCAAACTTATTATTTTAGTAGGCCAATAAAGTTCCTTAGAAACTCAATGGAAAGGTGGCATCTTC---AC---AC---ATTTTAAGCACCTTATAAATTGGGTACCTTTGTCTGGCACTAAAATACCCTACTTGAACTTA---------AAAATAAAAATCAATAAATCAATCTACTTCTCAGTCAACAAAGAAGAAGATGAAAGGCAATAACGGGGCAGATTAAAGTCCTAGCAATGA-ATTCCAAATGTACAGGAGACTCAGTTTGATTAAGATG i saiBol1.JH378136 C 0 I 8 s cebCap1.NW_016107324v1 9316147 299 + 13033340 AGCCAGCC-AGTACTTTGTAACCTGGCAGTAAGGCCTC-AAAATCAAACCTATTATTTTAGTAGGCCAATTAAGTTCCTTAGAAACCCAATGGAAAGGTGGCATCTTC---AT---AC---ATTTTAAGCACCTTATAAATTGGGTGTCTTTGCCTGGCCCTAAAATATGCTTCTTGAACTTA---------AAAATAAAAATCAATAAATGAATCTATTTCTCAGTCAACAAAGAAGCAGATGAAAGGCAATAACAGGGCAGATTAAAGTCCTAGCAATGA-ATTCCAAATATACAGGGACCTTAGTTTTATTAAAATG i cebCap1.NW_016107324v1 C 0 I 119 s aotNan1.NW_018501505v1 6397992 299 - 11604778 AGCCAGCC-AGCACTTTGTAACCTGGCAGTAAGGCCTC-AAAATCAAACCTATTATTTTAGTAGGCCAATTAAGTTCCTTAGAAACTCAATGGAAAGGTGGCATCTTC---AC---AC---ATTTTAAGCACCTTATAAATTGGGTACCTTTGGCTGGCACTAAAATATCCTTCTTGAACTTA---------AAAATAAAAATCAATAAATCAATCTACTTCTCAGTCAACAAAGAAGCAGATGAAAGGCAATAACGGGTCAGATTAAAGTCCTAGCAATGA-ATGCCAAATATACAGGAGCCTTAGTTTGATTAAGATG i aotNan1.NW_018501505v1 C 0 I 5 s otoGar3.GL873530 36223416 309 - 36342412 AGCCAACC-AGCACTTTGTAACTTGGTGACCAGGCCTT-TAAGTGAAACCTGTTATGTTAGTACATCAATTAAGTTCTTTAGGAACTTAATGGCAAGGATGCATCTTC---AT---ACCATATTTTCAGTACCTTATAAAGTGGAAACCTTGGTCTGGCACTAAAATATCCTTGTACTTCTTA--ACAAATCAAAACCAAAATCAATAAATCAATCTAGTTTCAAGGTAACAAAGCAGCAGCTGAAAAGCAACAGTGAGGCATATTAAAGTTCTAGAAATGA-TTCCCAGATATACTGGAACCTTAGTTTGGGTAAGACT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58125713 300 - 182113224 GGCCAGAC-AGCACTTTGTAACTTCGTAG-CAGTCCTC-TAAATCAAACCTATTATTTTAG-AAGCTAACAAAGTTCTTCTGAAACTCAGGAGAAAGGGCAGATCTCTTCAAA---AT---ACTTCCAGCATCTAATAAATTAAATATCTTAGCCTGGTACAAAAAGAACTTCCTTGAAATTA------CTGCAAATAAAAATCAGTCAATCAGGCAAGTTCCTGGGGAATA-AGAATTGCATAAAATGGAACAATGAACTGGACAGAAGTTTTAAAGATGT-CTCACAAATATGGTGGAGTCTC--TTTGATTAAGGCA i mm10.chr2 C 0 C 0 s canFam3.chr30 26824976 306 - 40214260 AGCCAGCC-AGCAC-TCGTAGCCTGGCA-TCAGGCCTC-TAAACCAAACCTATTATTTTAG-AGGGTAATTATGTTCTCTAGTAACTCAGTGGAAAGGCTGCATCTTC---ACAGAAT---ATTTCCAGTACCTGATAAATTGAGTACCTTGATCTAGCACTAAAG---ATTTTTTGAAATTATTACAAGTCAAAATCAAAATCAATAAATTAATCCAGTTCCCAGGCAACAAAGAAGCTGATGAAAGGCAAGAATGAAGCAGATTAAAGTTCTAGCGATGATGCTCCAAATATAATAGAGCCTTTATTTTATTAACACT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831537 497 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=101700.000000 s hg38.chr14_KI270725v1_random 167111 27 + 172810 AC-------------------AA--------AAAACACC--------------------------------TGGAGGAAGGGCACT s panTro5.chr1 126794303 28 + 228573443 AC-------------------AA-------GAAAACACC--------------------------------TGGAGGAAGGGCACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405356 28 - 99763055 AC-------------------AA-------AAAAACACC--------------------------------TGGCAGAAGGGCACT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551688 28 + 121039945 AC-------------------AA-------AAAAACAGC--------------------------------TGGCGGAAGGGCACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204565 44 - 169600520 Ca----aaaaaaaaa------aaaaaaaaaaaaaaCACC--------------------------------TGGAAGAAGGGCACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882139 41 - 171882078 C-------aaaaaaa------aaaaaaaaaaaaaaCACC--------------------------------TGGAAGAAGGGCACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954943 39 + 40200012 C---------aaaaa------aaaaaaaaaaacaaCACC--------------------------------TGGAAGAAGGGCACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400435 50 - 7633303 CC----aaaaaaaaaaaaaccaaaaaaaaaaaaaaCACC--------------------------------TGGAAGAAGGGCACT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197372 43 + 58131712 CC-----aaaaaaaa------aaaaaaaaaaaaaaCACC--------------------------------TGGAAGAAGGGCACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592682 48 - 2620224 CCaaaaaaaaaaaaa------aaaaaaaaaaaaaaCACC--------------------------------TGGAAGAAGGGCACT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418249 44 - 10629787 CC----aaaaaaaaa------aaaaaaaaaaaaaGCACC--------------------------------TGGAAGAAGGGCACT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357677 44 + 4596561 CC----aaaaaaaaa------aaaataaaaaaaaaCACC--------------------------------TGGAAGAAGGGCACT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999858 27 - 132174527 ---------------------------AAAAGAAACACC--------------------------------GGGAAGAAGGGCAGC i calJac3.chr10 I 2 C 0 s saiBol1.JH378136 10806874 59 + 21366645 ---------------------------aaaaaaaacaacaacaacaacaaaaacaaaaacaaaaaAGCATGGGGAAGAAGGGCAGC i saiBol1.JH378136 I 8 C 0 s aotNan1.NW_018501505v1 6398296 27 - 11604778 ---------------------------AAAAAAAACACT--------------------------------AGGAAGAAGAGCAGC i aotNan1.NW_018501505v1 I 5 C 0 s otoGar3.GL873530 36223725 28 - 36342412 --------------------------CCGAGGAAACACC--------------------------------TGGATGAAGTGCAGC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126013 16 - 182113224 --------------------------TCAAGGGAACTCT--------------------------------TGA------------ i mm10.chr2 C 0 C 0 s canFam3.chr30 26825282 26 - 40214260 ----------------------------CAGGAAGCACC--------------------------------TGGAAGAAGTGCAGC i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831537 497 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I e cebCap1.NW_016107324v1 9316446 119 + 13033340 I a score=1569257.000000 s hg38.chr14_KI270725v1_random 167138 131 + 172810 CAAGTCTGG--CTCATGGTCTCTTTGTTCTTCCT---AAAATCTACAT-CCCTTGCATCAACTACAGTACTATAGTCGATAATTTGAAGTTGAAGCATAATATCTTA-TTTTTTTCTGACATTGCAAGTATATAACAG s panTro5.chr1 126794331 130 + 228573443 CAAGTCTGG--CTCATGGTCTCTTTGTTCTTCTT---AAAATCTACAT-CCCTTGCATCAACTACAGTACTATAGTTGATGATTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CGGACATTGCAAATATATAACAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405384 130 - 99763055 CAAGTCTGG--CTCACGGTCTTTTTGTTCTTCCT---AAAACCGACAT-CCCTTGCATCAACTACAGTACTATACTTGATACTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAACTATATAACAG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551716 130 + 121039945 CAAGTCTGG--CTCATGGTCTCTTTGTTCTTCCT---AAAACCTACAT-CCCTTGCATCAACTACAGTACTATACTTGATACTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204609 131 - 169600520 CAAGTCTGG--CTCATGGTCTCTTTGTGCTACCT---AAAACCTACATCCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882180 131 - 171882078 CAAGTCTGG--CTCATGGTCTCTTTGTTCTACCT---AAAACCTACATCCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26954982 131 + 40200012 CAGGTCTGG--CTCATGGTCTCTTTGTTCTACCT---AAAACCTACATCCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400485 131 - 7633303 CAAGTCTGG--CTCATGGTCTCTTTGTTCTACCT---AAAACCTACATCCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197415 131 + 58131712 CAAGTCTGG--CTCATGGTCTCTTTGTTCTACCT---AAAACCTGCATCCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592730 131 - 2620224 CAAGTCTGG--CTCATGGTCTCTTTGTTCTACCT---AAAACCTACAACCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418293 131 - 10629787 CAAGTCTGG--CTCACGGTCTCTTTGTTCTACCT---AAAACCTACATCCCCTTGCATCAACTAAAGTACTATACTTGATGCTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357721 131 + 4596561 CAAGTCTGG--CTCATGGTCTCTTTGTTCTACCT---AAAACCTACATCCCCTTGCATCAACTACAGTACTATACTTGATGCTTTGAAGTTGAAGCACAATATCTTA-TTTTTT-CTGACATTGCAAGTATATAACAG i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 107999885 132 - 132174527 CAAGTCTGG--TTCATGGTCCCTTTGTTCTTCCTAAAAAAACCTACAT-CCCTTGCATCAACTATAGTACTATACTTGATACTTTGAAGTTGAAGCATAATATCTTA--TTTTT-CTGACATTGCAAGTATGTAACAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10806933 133 + 21366645 CCACTCTGG--CTCATGGTCCCTTTGTTCTTCCTTAAAAAAACTACAT-CCCTTGCATCAACTATAGTACTATACTTGATACTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATGTAACAG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316565 134 + 13033340 CAAGTCTGG--CTCATGGTCCCTTTGTTCTTCCTAAAAAAACCTACAT-ACCTTGCATCAACTATAGTACTATAGTTGATACTTTGAAGTTGAAGCATAATATCTTATTTTTTT-CTGACATTGCAAGTATGTAACAG i cebCap1.NW_016107324v1 I 119 C 0 s aotNan1.NW_018501505v1 6398323 133 - 11604778 CAAGTCTGG--CTCATGGTCCCTTTGTTCTTCCTAAAAAAACCTACAT-CCCTTGCATCAACTATAGTACTATACTTGATACTTTGAAGTTGAAGCATAATATCTTA-TTTTTT-CTGACATTGCAAGTATGTAACAG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223753 131 - 36342412 CAAGTCTGT--TTCTCGGTCCCTTTGTTCTCCCT---AAAACGCATAT-CCCTCACATTAACTACAGTATCATACTCGGTACTTTGACGTTGAAACATAATGCCTTATTTTTTT-CTGACATGGCAAGTATATTACAG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126029 131 - 182113224 -AAGTCTTGAAATTTTGGTCCTTCTGGTCTACCT---CTAAATAGCAT-CCTTTCCCTTAACAATGTCATCACAGTTAGTAAGTAGAAGGCAGATACTGTTGCCTTA-TTGTAT-CTGACAATGGAAATTTATTGTAG i mm10.chr2 C 0 C 0 s canFam3.chr30 26825308 131 - 40214260 CAAATCTTG--CTCTTCATCCCTTTGTTCTCCCT---AAGACCCATAT-CCCTTGTTTTAACTCTAGTACCATACCTGATACTCTAAAGTTGAGACATACTGCTTTATTTTTTT-CTGACATTGCAAATGCATTATAT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831537 497 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=2630.000000 s hg38.chr14_KI270725v1_random 167269 17 + 172810 ATCACAAAGttttttt-t s panTro5.chr1 126794461 18 + 228573443 ATCAGTAAGTTTTTTTCt i panTro5.chr1 C 0 C 0 s otoGar3.GL873530 36223884 17 - 36342412 CTCAGAAAATTTTTCC-T i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126160 17 - 182113224 ACCACAACCTTGTTTC-T i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831537 497 + 72422247 I e rhiBie1.NW_016805531v1 2357852 0 + 4596561 C e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26825439 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10807066 0 + 21366645 C e aotNan1.NW_018501505v1 6398456 0 - 11604778 C e cebCap1.NW_016107324v1 9316699 0 + 13033340 C e calJac3.chr10 108000017 0 - 132174527 C e colAng1.NW_012121598v1 8418424 0 - 10629787 C e manLeu1.NW_012108674v1 2592861 0 - 2620224 C e chlSab2.chr26 36197546 0 + 58131712 C e cerAty1.NW_012000887v1 4400616 0 - 7633303 C e macNem1.NW_012010577v1 26955113 0 + 40200012 C e macFas5.chr7 147882311 0 - 171882078 C e rheMac8.chr7 146204740 0 - 169600520 C e nomLeu3.chr6 53551846 0 + 121039945 C e panPan2.chr15 55405514 0 - 99763055 C a score=273.000000 s hg38.chr14_KI270725v1_random 167286 1 + 172810 t s panTro5.chr1 126794479 1 + 228573443 t i panTro5.chr1 C 0 C 0 s mm10.chr2 58126177 1 - 182113224 T i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831537 497 + 72422247 I e rhiBie1.NW_016805531v1 2357852 0 + 4596561 C e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26825439 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10807066 0 + 21366645 C e otoGar3.GL873530 36223901 0 - 36342412 C e aotNan1.NW_018501505v1 6398456 0 - 11604778 C e cebCap1.NW_016107324v1 9316699 0 + 13033340 C e calJac3.chr10 108000017 0 - 132174527 C e colAng1.NW_012121598v1 8418424 0 - 10629787 C e manLeu1.NW_012108674v1 2592861 0 - 2620224 C e chlSab2.chr26 36197546 0 + 58131712 C e cerAty1.NW_012000887v1 4400616 0 - 7633303 C e macNem1.NW_012010577v1 26955113 0 + 40200012 C e macFas5.chr7 147882311 0 - 171882078 C e rheMac8.chr7 146204740 0 - 169600520 C e nomLeu3.chr6 53551846 0 + 121039945 C e panPan2.chr15 55405514 0 - 99763055 C a score=-52.000000 s hg38.chr14_KI270725v1_random 167287 9 + 172810 tctttt----------------ttt s panTro5.chr1 126794480 25 + 228573443 tcttttatttatttatttatttttt i panTro5.chr1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5831537 497 + 72422247 I e rhiBie1.NW_016805531v1 2357852 0 + 4596561 C e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58126178 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26825439 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10807066 0 + 21366645 C e otoGar3.GL873530 36223901 0 - 36342412 C e aotNan1.NW_018501505v1 6398456 0 - 11604778 C e cebCap1.NW_016107324v1 9316699 0 + 13033340 C e calJac3.chr10 108000017 0 - 132174527 C e colAng1.NW_012121598v1 8418424 0 - 10629787 C e manLeu1.NW_012108674v1 2592861 0 - 2620224 C e chlSab2.chr26 36197546 0 + 58131712 C e cerAty1.NW_012000887v1 4400616 0 - 7633303 C e macNem1.NW_012010577v1 26955113 0 + 40200012 C e macFas5.chr7 147882311 0 - 171882078 C e rheMac8.chr7 146204740 0 - 169600520 C e nomLeu3.chr6 53551846 0 + 121039945 C e panPan2.chr15 55405514 0 - 99763055 C a score=273.000000 s hg38.chr14_KI270725v1_random 167296 1 + 172810 t s panTro5.chr1 126794505 1 + 228573443 t i panTro5.chr1 C 0 C 0 s ponAbe2.chrUn 5832034 1 + 72422247 t i ponAbe2.chrUn I 497 I 258 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e rhiBie1.NW_016805531v1 2357852 0 + 4596561 C e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58126178 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26825439 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10807066 0 + 21366645 C e otoGar3.GL873530 36223901 0 - 36342412 C e aotNan1.NW_018501505v1 6398456 0 - 11604778 C e cebCap1.NW_016107324v1 9316699 0 + 13033340 C e calJac3.chr10 108000017 0 - 132174527 C e colAng1.NW_012121598v1 8418424 0 - 10629787 C e manLeu1.NW_012108674v1 2592861 0 - 2620224 C e chlSab2.chr26 36197546 0 + 58131712 C e cerAty1.NW_012000887v1 4400616 0 - 7633303 C e macNem1.NW_012010577v1 26955113 0 + 40200012 C e macFas5.chr7 147882311 0 - 171882078 C e rheMac8.chr7 146204740 0 - 169600520 C e nomLeu3.chr6 53551846 0 + 121039945 C e panPan2.chr15 55405514 0 - 99763055 C a score=18157.000000 s hg38.chr14_KI270725v1_random 167297 214 + 172810 gagatggagtctcgctctgtcacccaggctgga-tgcagtggcacgatcgtcactgcaagctccgcctcctggcttcacaccattctcctgcctcagcctcccgagtagttgggactacaggcgcccgccaccacgcccggctaattttttctatttttcagtacagacggggtttcaccgtgttagccaggatggtcgcgatctcctgacctcC s panTro5.chr1 126794506 215 + 228573443 gagatggagtctcgctctgtcacccaggctggagtgcagtggctcgatcgtcactgcaagctccgcctcccggtttcacgccattctcccgcctcagcctcccgagtagctaggactacaggcgcccgccaccacgcccagctatttttttctatttttcagtggagatggggtttcaccgtgttagccaggatggtcgcgatctcctgacctcg i panTro5.chr1 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832035 258 + 72422247 I e rhiBie1.NW_016805531v1 2357852 0 + 4596561 C e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58126178 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26825439 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I e saiBol1.JH378136 10807066 0 + 21366645 C e otoGar3.GL873530 36223901 0 - 36342412 C e aotNan1.NW_018501505v1 6398456 0 - 11604778 C e cebCap1.NW_016107324v1 9316699 0 + 13033340 C e calJac3.chr10 108000017 0 - 132174527 C e colAng1.NW_012121598v1 8418424 0 - 10629787 C e manLeu1.NW_012108674v1 2592861 0 - 2620224 C e chlSab2.chr26 36197546 0 + 58131712 C e cerAty1.NW_012000887v1 4400616 0 - 7633303 C e macNem1.NW_012010577v1 26955113 0 + 40200012 C e macFas5.chr7 147882311 0 - 171882078 C e rheMac8.chr7 146204740 0 - 169600520 C e nomLeu3.chr6 53551846 0 + 121039945 C e panPan2.chr15 55405514 0 - 99763055 C a score=200362.000000 s hg38.chr14_KI270725v1_random 167511 17 + 172810 ATCACAAAGTTGATTTT s panTro5.chr1 126794721 17 + 228573443 ATCACAAAGTTGATTAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405514 17 - 99763055 ATCACAAAGTTGATTCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551846 17 + 121039945 ATCACAAAGTTGATTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204740 17 - 169600520 ATCACAAAGTTGATTCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882311 17 - 171882078 ATCACAAAGTTGATTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955113 17 + 40200012 ATCACAAAGTTGATTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400616 17 - 7633303 ATCACAAAGTTGATTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197546 17 + 58131712 ATCACAAAGTTGATTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592861 17 - 2620224 ATCACAAAGTTGATTCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418424 17 - 10629787 ATCACAAAGTTGATTCT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357852 17 + 4596561 ATCACAAAGTTGATTCT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000017 17 - 132174527 ATCACAAAGTTGATTCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807066 17 + 21366645 ATCACAAAGTTGATTCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316699 17 + 13033340 ATCACAAAGTTGATTCC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398456 17 - 11604778 ATCACAAAGTTGATTCT i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26825439 17 - 40214260 ATCACCAAATTGTTTCT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832035 258 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58126178 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I e otoGar3.GL873530 36223901 0 - 36342412 C a score=86292.000000 s hg38.chr14_KI270725v1_random 167528 6 + 172810 CTTTTC s panTro5.chr1 126794738 6 + 228573443 CTTTTC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405531 6 - 99763055 CTTTTC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551863 6 + 121039945 CTTTTC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204757 6 - 169600520 CTTTTC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882328 6 - 171882078 CTTTTC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955130 6 + 40200012 CTTTTC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400633 6 - 7633303 CTTTTC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197563 6 + 58131712 CTTTTC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592878 6 - 2620224 CTTTTC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418441 6 - 10629787 CTTTTC i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357869 6 + 4596561 CTTTTC i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000034 6 - 132174527 CTTTTC i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807083 6 + 21366645 CTTTTC i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316716 6 + 13033340 CTTTTC i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398473 6 - 11604778 CTTTTC i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223901 6 - 36342412 CTTTTC i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26825456 6 - 40214260 CTTTTC i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832035 258 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e mm10.chr2 58126178 0 - 182113224 C e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=237956.000000 s hg38.chr14_KI270725v1_random 167534 20 + 172810 ACTTGTCAAGTTCTTACACT s panTro5.chr1 126794744 20 + 228573443 ACTTGTCAAGTTCGTACACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405537 20 - 99763055 GCTTGTCAAGTTCTTACCCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551869 20 + 121039945 GCTTGTCAAGTTCTTACCCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204763 20 - 169600520 ACTTGTCAAGCTCTTACCCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882334 20 - 171882078 ACTTGTCAAGCTCTTACCCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955136 20 + 40200012 ACTTGTCAAGCTCTTACCCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400639 20 - 7633303 ACTTGTCAAGCTCTTACCCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197569 20 + 58131712 ACTTGTCAAGCTCTTACCCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592884 20 - 2620224 ACTTGTCAAGCTCTTACCCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418447 20 - 10629787 ACTTGTCAAGCTCTTACCCT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357875 20 + 4596561 ACTTGTCAAGCTCTTACCCT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000040 20 - 132174527 ACCTGTCAAGCTCTTACCCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807089 20 + 21366645 ACTTGTCAAGCTCTTACCCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316722 20 + 13033340 ACTTGTCAAGCTCTTACCCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398479 20 - 11604778 ACTTGTCAAGCTCTTACCCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223907 20 - 36342412 ACTTGTCAAGCTGTTACCCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126178 17 - 182113224 ACTTGTCATGCTGTTGC--- i mm10.chr2 C 0 I 1 s canFam3.chr30 26825462 17 - 40214260 ACAAGAGAAGCTGTTCC--- i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832035 258 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=55423.000000 s hg38.chr14_KI270725v1_random 167554 4 + 172810 GTCT s panTro5.chr1 126794764 4 + 228573443 GTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405557 4 - 99763055 GTCT i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5832293 4 + 72422247 GTCT i ponAbe2.chrUn I 258 I 2609 s nomLeu3.chr6 53551889 4 + 121039945 GTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204783 4 - 169600520 GTCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882354 4 - 171882078 GTCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955156 4 + 40200012 GTCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400659 4 - 7633303 GTCT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197589 4 + 58131712 GTCT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592904 4 - 2620224 GTCT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418467 4 - 10629787 GTCT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357895 4 + 4596561 GTCT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000060 4 - 132174527 GTCT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807109 4 + 21366645 GTCT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316742 4 + 13033340 GTCT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398499 4 - 11604778 GTCT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223927 4 - 36342412 GTCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126196 2 - 182113224 GT-- i mm10.chr2 I 1 C 0 s canFam3.chr30 26825479 3 - 40214260 -CCT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=1506354.000000 s hg38.chr14_KI270725v1_random 167558 120 + 172810 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAATAACAAATCATCTCTCTTCCCACTCTCTATCAATTTGATCTCTTTCTCTTTGCTTTGTTCTCGAGGAGAGAAAGGTGTAT s panTro5.chr1 126794768 99 + 228573443 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTGTTC---------------------CCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405561 120 - 99763055 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATCTGATCTCTTTCTCTTCGCTTTGTTCTGGAGAAGTGAAAGGTGTAT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53551893 120 + 121039945 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATCTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGTGAAAGGTGTAT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204787 120 - 169600520 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882358 120 - 171882078 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955160 120 + 40200012 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400663 120 - 7633303 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197593 120 + 58131712 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGAAGGAGAGAAAGGTGTAT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2592908 120 - 2620224 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGCAGGAGAGAAAGGTGTAT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418471 118 - 10629787 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCG--TCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2357899 120 + 4596561 ATCTAAAATTCATATCTTGACCTTTCATGTCTGTCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGGAGAGAAAGGTGTAT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000064 120 - 132174527 ATCTAAAATTCATACCTTGACCTTTCATGTCTATCTTCAAGAACAAATTATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGAAGAGACAGGTATAT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807113 120 + 21366645 ATCTAAAATTCATACCTTGACCTTTCATGTCTATCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGAAGAGAAAGGTATAT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316746 120 + 13033340 ATCTAAAATTCATACCTTGACCTTTCATGTCTATCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGAAGAGAAAGGTATAT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398503 120 - 11604778 ATCTAAAATTCATACCTTGACCTTTCATGTCTATCTTCAAGAACAAATCATCTCTCTTCCCACTCTCTGTCAATTTGATCTCTTTCTCTTTGCTTTGTTCTGGAGAAGAGAAAGGTATAT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36223931 102 - 36342412 ----AAAATTCATACCTTGACCTTTCCTGTGCGTCTTTAAGAACAAATCATCTTTCTTCCCAGTCTCTGTCAATTTGATCTCTTTCTCTTTG--------------AAAGGAAGGtatat i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126198 104 - 182113224 GTCTAAAGTTCACA-CTTGATCTTACATGTCCATCCTCAATAACAAATCATCTTTCTTCCAACTTTTCATCCATATA------TTTTTTTTGAAGTG---TGGAAGAATAAAAG------ i mm10.chr2 C 0 C 0 s canFam3.chr30 26825482 117 - 40214260 ATCTAAAATTCATGCCTTGACCTTACATGTCTGTCTTCTAGAACAAATCATCTTTC-TCTCACTGTCCATTAAGGTGGTCTCCG--TCTTTGCTGTATACTGGAAAGGAAGAAAGCATAT i canFam3.chr30 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=3592008.000000 s hg38.chr14_KI270725v1_random 167678 340 + 172810 CTGTAT---------------------TCTTTTC-TTCTTTGTCCGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCTTTATGCAAAGGAGAACTAGTTACTTATTTTTGTACCATTTACAAAAAAAGTAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATATTCATTTTATTTAATTTTGTTTTAATTGGGGCACAGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAAtatttatatcttaaaattgttt-ttatat-ttctgt------------------------ttctatGACATTCAAATGGGAAAA--TTTTTTTCTAGAATT---TAGAGAGATTTACAAATAA---TTGCA s panTro5.chr1 126794867 340 + 228573443 CTGTAT---------------------TATTTTC-TTCTTTGTCCGAAGTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCTTTATGCAAAGGAGAACTAGTTACTTAGTTTTGTACCATTTACAAAAAAAGTAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATGttcattttattcaattttattttaattGGGGCACAGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGCTATAAATCCTCAAGAATATTTATACCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTCTAAGACATTCAAATGGGAAAA--ATTTTTCCTAGAATT---TAGACAGATTTACAAATAA---TTGCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55405681 338 - 99763055 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCTTTATGCAAAGGAGAACTAGTTACTTAGTTTTGTACCATTTAC-AAAAAAGTAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATATTCATTTTATTCAATTTTATTTTAATTGGGGCACAGATATAAGGGAATAT-TTTTAGTTGACTAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTATATCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTCTATGACATTCACATGGGCAAA---TTTTTTCTAGAATT---TAGACAGATTTACAAATAA---TTGCA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53552013 339 + 121039945 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCTTTTTGCAAAGGAGAACTAGTTACTTAGTTTTGTACCATTTAC-AAAAAAGTAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATAttcattttattcaattttattttaattGGGGCATAGATATAAGGGAATAT-TTTTAGTTGACTAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTATATCTTAAAATTGCTT-TTATAT-TTCTGT------------------------TTCTATGACATTCAAATGGGCAAA--TTTTTTTCTAGAATT---TAGACAGATTTACAAATAA---TTGCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146204907 340 - 169600520 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAG-AAA--GTGCTGAAAACCAGTA--TCTTAAAATATTCATTTTATTCCATTTTATTTTAATTGGGGCATGGATATAAGGGAATCT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTTTATGACATTCAAATGGGCAAA-TTTTTTTTCTTGAATT---TAGACAGATTTACAAATAA---TTGCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882478 340 - 171882078 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAG-AAA--GTGCTGAAAACCAGTA--TCTTAAAATATTCATTTTATTCCATTTTATTTTAATTGGGGCATGGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTTTATGACATTCAAATGGGCAAA-TTTTTTTTCTTGAATT---TAGACAGATTTACAAATAA---TTGCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955280 339 + 40200012 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAG-AAA--GTGCTGAAAACCAGTA--TCTTAAAATAttcattttattccattttattttaattGGGGCATGGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAatatttacatcttaaaattgttt-ttatat-ttctgt------------------------ttttatGACATTCAAATGGGCAAA--TTTTTTTCTTGAATT---TAGACAGATTTACAAATAA---TTGCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4400783 339 - 7633303 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAG-AAA--ATGCTGAAAACCAGTA--TTTTAAAATATTCATTTTATTCCATTTTATTTTAATTGGGGCATGGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTTTATGACATTCAAATGGGCAAA--TTTTTTTCTTGAATT---TAGACAGATTTACAAATAA---TTGCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36197713 334 + 58131712 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATAttcattttattgcattttattttaattGGGGCATGGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTG-TT-TTATAT-TTCTGT------------------------TTCTATGACATTCAAGTGGGCAAA--TTTTTTTCTTGAATT---TAGACAGATGTAC----AA---TTGCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2593028 339 - 2620224 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATAttcattttatttcattttattttaattGGGGCATGGATATAAGGGAATAT-TTTTAATTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTTTATGACATTCAAATGGGCAAA--TTTTTTTCTTGAATA---TAGACAGATTTACAAATAA---TTGCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418589 338 - 10629787 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAAACAGCTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTTTGTACTATTTAC-AAAAAAGAAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATATTCATTTTATTCCTCTTTATTTTAATTGGGGCACGGATATAAAGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTG-TT-TTGTAT-TTCTGT------------------------TTCTATGACATTCAAAGGGGCAAA--TTTTTTTCTTGAATT---TAGACAGATTTACAAATAA---TTGCA i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2358019 338 + 4596561 CTGTAC---------------------TATTTTC-TTATTTGTCAGAATTAAACAGTTGTTCTTGGAGAGTGGTGAGCAGTTCCTCATGCAAAGGAGAACTAGTTATTTAGTTCTGTACCATTTAC-AAAAAAGAAAG-AAA--ATGCTGAAAACCAGTA--TCTTAAAATATTCATTTTATTCCACTTTATTTTAATTGGGGCATGGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATAAAAATATTTGGTTATAAATCCTCAAGAATATTTACATCTTAAAATTGTTT-TTATAT-TTCTGT------------------------TTCTATGACATTCAAATGGGCAAA---TTTTTTCTTGAATT---TAGACAGATTTACAAATAA---TTGCA i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000184 342 - 132174527 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAATCAACTATTTTTGGAGAGTGGTAAGCAGTTATTTATGCAAAGGCGAACCTGTTATTTAGTTTTGTACCCTTTAC-AAAAGAGAAAATAAA--ATGCTAAAACACAGTA--TCTTAAAATACTCATTTTATTCCATTCTATTTTAATTGGGGCACAGATATAAAGGAATAT-TTTTAGTTGAATAAGGAATTAAAATATTTGGTTACAAATCCTCACAAAGATTTATATTTTAAAATTGTTT-TTGTGT-TTCTGT------------------------TTCTATGACAATCAAGTGAGCAAATTTTTTTTTGTAGAATT---CAGACAGATTTACAAATAA---TTGCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807233 340 + 21366645 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAATCAACTATTGTTGGAGAGTGGTAAGAAGTTATTTATGAAAAGGTGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAATAAA--ATGCTGAAACCCAGTA--TCTTAAAATATTCATTTTATTTCATTCTATTTTAACTGGGGCACAGATATAAGGTAATAT-TTTTAGTTGAAGAAGGAATTAAAATATTTGGTTACAAATCCTCACAAATATTTACATCTTAAAATTGTTT-TTGTAT-TTCTGT------------------------TTCTATGACAATCAAGTGAGCAAA--ATTTTTTGTAGAATT---CAGACAAATTTACAAATAA---TTGCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9316866 340 + 13033340 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAATCAACTATTCTTGGAGAGTGGTAAGCAGTTATTTATGCAAAGCTGAGCTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAATAAA--ATGCTGAAACCCAGTA--TCTTAAAATATTCATTTTATTCCATTCTATTTTAATTGGGGCACAGATATAAGGGAATAT-TTTTAGTCGAATAAGGAATTAAAATATTTGGTTACAAATCCTCACAAATATTTACATCTTAAAATTGTTT-TTGTAT-TTCTGT------------------------TTCTATGACAATCAAGTGAGCAAA--ATTTTTTGTAGAATT---CAGAAAGATTTACAAATAA---TTGCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398623 336 - 11604778 CTGTAT---------------------TATTTTC-TTATTTGTCAGAATTAATCAACTATTCTTGGAGAGTGGTAAGCAGTTATTTATGCAAAGGTGAACTAGTTATTTAGTTTTGTACCATTTAC-AAAAAAGAAAATAAA--ATGCTGAAACCCAGTA--TCTTAAAATATTCATTTTATTCCATTCTGTTTTAATTGGGGCACAGATATAAGGGAATAT-TTTTAGTTGAATAAGGAATTAAAATATTTGGTTACAAATCCTCACAAATATTTACATCTTAAAATTGTTT-TTGTAC-TTCTGT------------------------TTCTATGACAATCAAGTGAGCAAA--TTTTTTTGTAGAATT---CAG----ATTTACAAATAA---TTGCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36224033 392 - 36342412 atatacatatatatatatatatatatatataGTCACGATTTCTCAGAATTAAATATTTTTTCTCGGAGAATGTTGAATAGTTACTTATAAGAAGGTGGACGAATTCTTTAGTTTTTTACTAGATAC-AAAAGGGAAAT-ACA--ATGCTGAAGACCGACATTTCTTAAAATATTCATTTTATTCCATCATAATTTAATTGGGGCCCAGATATAAGGTAATATATTTTAGTTCAATAGGGAATAAAAGGGCTTGGCTATAAATCCT-AAAGACATTTATATATTAGAATTGTTTATTATATATCCTGTTCTTTTAAAAAACTATATAACCTGTTTTATGACATTTAAGCTAACAAA--ATTTTTTCTAGAATT---TAGACATATTACCAAACAAGAGTTACA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126302 306 - 182113224 ----AA---------------------AA------GAAATTGTCTAAATAAAAAAGTCATTATTGGAGAATG-----------CGTGTGTAAAGGTGAACTAGTTACTTAGCATTTTGTTAGTCAC-AAAAGATAAAA-AAAAGAGGTTAAAAATTGACA----ATAAAATGTGAATTTTATGACATGC-----TAAGTGTGACATAGATATAAGGAAATAA-TTTTAATTC-TCAATGACTAAAAAGATTTTGTTATTAACCTTAAA-------TGCATACTAAAGTTATTT-TCTTGT-TTCAG-------------------------TAATATGATAT--ATATGTGCAGA--AATATTTCTGCATTTGCATAGATAGACTTTCAAATCA---TGGTG i mm10.chr2 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1081784 1207 + 2868945 M e canFam3.chr30 26825599 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=2244317.000000 s hg38.chr14_KI270725v1_random 168018 199 + 172810 TAAATATGTCT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ACAACAATGAGAAAGTGTATTGAACTTGA---AG-AATACCCTAATTGTGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGTA---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT s panTro5.chr1 126795207 199 + 228573443 TAAATATGTCT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ACAACAATGAGAAAGTGAATTGAAGTTGA---AA-AATACCCTAATTGTGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTC--------------------AGAATTCTTGCCTTCACTGTG---TTTTTTTCCTTAGATTTTCTCTACGTACTGTTCACAAAATTCAGC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55406019 199 - 99763055 TAAATATGTCT-AGAAGTTG--AAAAATTAAAAGAAA-AAT------ACAACAATGAGAATGTGAATTGAACTTGA---AA-AATACCCTAATTGTGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGTG---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53552352 199 + 121039945 TAAATATGTCT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ACAACAAAGAGAATGTGAATTGAACTTGA---AA-AATACCCTAATTGTGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTG--------------------GGAATTCTGGCCTTCACTGTG---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146205247 199 - 169600520 TAAATATGTCT-Agaaattg--aaaaattaaaagaaa-aat------gcaacaatgagaacatgaattgaacttga---aa-aATACCCTAATTATGAAAACCAAAC-TTTCCTAATATTATTTTAATGTTTTCTGACTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGCA---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147882818 199 - 171882078 TAAATATGTCT-Agaaattg--aaaaattaaaagaaa-aat------gcaacaatgagaacatgaattgaacttga---aa-aATACCCTAATTATGAAAACCAAAC-TTTCCTAATATTATTTTAATGTTTTCTGACTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGCA---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955619 198 + 40200012 TAAATATGTCT-AGAAATTG--AAAAATTAAAAGAAA-AAT------GCAACAATGAGAACATGAATTGAACTTG----AA-AATACCCTAATTATGAAAACCAAAC-TTTCCTAATATTATTTTAATGTTTTCTGACTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGCA---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4401122 199 - 7633303 TAAATATGTCT-Agaaattg--aaaaattaaaggaaa-aat------gcaacaatgaaaatgtgaattgaacttga---aa-aATACCCTAATTATGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGACTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGCG---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36198047 196 + 58131712 TAA--ATGTCT-AGAAATTG--AAAAATTAAAAGAAA-AAT------GCAACAATGAGAACGTGAATTGAACTTGA---AA-AA-ACCCTAATTATGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGTG---TTTTTTTCCTTAGCTTTTCTCTACATACTGTTCACAAAATTCAGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2593367 199 - 2620224 TAAATATGTCT-AGAAATTG--AAAAATTAAAAGAAA-AAT------GCAACAATGAGAATGTGAATTGAACTTGA---AA-AATACCCTAATTATGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGACTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGCG---TTTTTTTCCTTAGATTTTCTCTACATACCGTTCACAAAATTCAGT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8418927 202 - 10629787 TAAATATGTCT-Agaaattg--aaaaattaaaagaaa-aat------gcaacaatgagaacgtgaattgaacttga---aa-aATACCCTAATTATGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTG--------------------GGAATTCTTGCCTTCACTGTGTTTTTTTTTTCCTTAGATTTTCTCTACATACTGTTCACACAATTCAGT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2358357 196 + 4596561 TAAATATGTCT-AGAAATTG---AAAATTAAAAG-AA-AAT------GCAACAATGAGAACGTGAATTGAACTTG----AA-AATACCCTAATTATGAAAACCAAAC-TTTCATAATATTATTTTAATGTTTTCTGATTTGCATTTTG--------------------GGAATTCTTACCTTCACTGTG---TTTTTTTCCTTAGATTTTCTCTACATACTGTTCACAAAATTCAGT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000526 194 - 132174527 TTAATATG-CT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ATAATAATGAGAAGGTGAATTGAACTTGA---AA-AATATCCTAATTCTGAAAACCAAAC-TTTCATAATATTA----AATTATTTCTGATTTGCATTTTG--------------------GGAACTCTTGCCTTTACTGTG---TTTTTTTCCTTAGACTTTCTCTACATACTGTTCCAAAAATTCAGT i calJac3.chr10 C 0 I 127 s saiBol1.JH378136 10807573 194 + 21366645 TAAATATG-CT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ACAATAATGAGAAGTTGAATTGAACTTGA---AA-AATATCCTAATTGTGAAAACCAAAC-TTTCATAATATTA----AATTATTTCTGATTTGCATTTTG--------------------GGAACGCTTGCCTTTACTGTG---TTTTTTTCTTTAGACTTTCTCGACATACTGTTTCAAAAATTCAGT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9317206 194 + 13033340 TAAATATG-CT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ACAGTAATGAGAAGGTGAATTGAACTTGA---AA-AATATCCTAATTGTGAAAACCAAAT-TTTCATAATATTA----AATGATTTCTGATTTGCATTTTG--------------------GGAACTCTTGCCTTTACTGTG---TTTTTTTCCTTAGACTTTCTCTACATACTGTTCCAAAAATTCAGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6398959 194 - 11604778 TAAATATG-CT-AGAAATTG--AAAAATTAAAAGAAA-AAT------ACAATAATGAGAAGGTGAATTGAACTTGA---AA-AATATCCTAATTGTGAAAACCAAAT-TTTCATAATATTA----AATTATTTCTGATTTGCATTTTG--------------------TGAACTCTTGCCTTTACTGTG---TTTTTTTCCTTAGACTTTCTCTACATACTGTTCCAAAAATTCAGT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36224425 202 - 36342412 TAAATATGTCT-AGAAATTG--AAAACTTGAAAAAAATGAT------CCACCAGCAAAAGGATAAACTGAACTTGA--GAG-AAGACCTTAATTGTGCAAACCAGTCTTTTCAGGGAAACATTTTAATGATTTCTGATTTGCATTTTA--------------------GATATTTTTGCCTTCCCTGTG---TTCTTTTCTTTAGACTTTCTCTCCATACTGCTCACAAAATTCAGC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126608 212 - 182113224 -------ATCT-AGGATTTAAAAAAAATCTGAAGAAC-AGT------ATA-CTATAAAGAGATAAATTGAACTTGAGAGAG-AATAGCTTGATTATAAAGACCA--T-TTTTATGCTATTACTTTAATAGTTTCTGGCTTGCATTTTAAAAAGTATGCCTTTGTTACCAGAAATTTCACCTTTACTGCA----TTCTTTCTTTAGGCTTTTTCT-CACACTGCTTGCAAACTTTAAT i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1082991 192 + 2868945 TAAATGTATCTAAAAAATTA--AAAAACTGAAAGAGA-AATCAGTGCACGGTAATAAGAAGATGAGCTGAACTCAA---AAGAACACATTGAT-------------A-GTTTGTGCCTTTGTTTTAGGGATCTTTGGGTTACA-TTTA--------------------GAAATTCTTGCCTTTACTGCA---TTATTTCCTTTGGTCTTTCT-TGCATGCTATTTAAATAATTCAGT i dasNov3.JH579377 M 1207 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e canFam3.chr30 26825599 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=684711.000000 s hg38.chr14_KI270725v1_random 168217 55 + 172810 TAAAAACTATTTTAGAGATTTTCTAGGGAAAAGGCTGCATGCTCAGTCATTGACT s panTro5.chr1 126795406 55 + 228573443 TAAAAACTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55406218 55 - 99763055 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTTCATGCTCAGTCATTGACT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53552551 55 + 121039945 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146205446 55 - 169600520 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883017 55 - 171882078 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955817 55 + 40200012 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4401321 55 - 7633303 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36198243 55 + 58131712 TAAAGGCTGTTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCCCAGTCATTGACT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2593566 55 - 2620224 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8419129 55 - 10629787 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2358553 55 + 4596561 TAAAAGCTATTTTAGAGATTGTCTAGGGAAAGGGCTGCATGCTCAGTCATTGACT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000847 55 - 132174527 taaaaGCTATTTTAGAGATTTTCTGGGGAAAGGGCTGGATGCTCAGTCATTGACT i calJac3.chr10 I 127 C 0 s saiBol1.JH378136 10807767 55 + 21366645 TAAAAGCTATTTTAGAGATTGTCTGGGGAAACGGCTGCATGCTCAGTCATTGACT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9317400 55 + 13033340 TAAAAGCTATTTTAGAGATTGTCTGGGGAAAGGGCTGCATGCTCAGTCATTGACT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6399153 55 - 11604778 TAAGATCTATTTTAGAGATTGTCTGGGGAAAGGGCTGCATGCTCAGTCATTGACT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36224627 55 - 36342412 AGAGGACAATTTTAGAGATTGTCTCGGGAAAGGGCGGTGTGCTCTGTCATTGATT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126820 55 - 182113224 AACACACTATTTTAAGGACTGTGCAGGGAATGGCTTATGTACTGTTTCATGTTCC i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1083183 45 + 2868945 AAAAGGCTCTTTTAAGGATTATCTATGGAAAGGGCTGCCTATTCT---------- i dasNov3.JH579377 C 0 I 457 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e canFam3.chr30 26825599 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=55650.000000 s hg38.chr14_KI270725v1_random 168272 4 + 172810 GTTA s panTro5.chr1 126795461 4 + 228573443 GTTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55406273 4 - 99763055 GTTA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53552606 4 + 121039945 GTTA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146205501 4 - 169600520 GTTA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883072 4 - 171882078 GTTA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955872 4 + 40200012 GTTA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4401376 4 - 7633303 GTTA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36198298 4 + 58131712 GTTG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2593621 4 - 2620224 GTTA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8419184 4 - 10629787 GTTA i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2358608 4 + 4596561 GTTA i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000902 4 - 132174527 GTTA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807822 4 + 21366645 GTTA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9317455 4 + 13033340 GTTA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6399208 4 - 11604778 GTTA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36224682 4 - 36342412 GTTA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126875 4 - 182113224 ATTC i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1083685 4 + 2868945 GTTA i dasNov3.JH579377 I 457 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e canFam3.chr30 26825599 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=6272453.000000 s hg38.chr14_KI270725v1_random 168276 481 + 172810 CTTACATTGGTACAATTAGGGGTATTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATTGGTAGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTAGAATTCTG-TGAGAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACAGCAATCTCATGAAATCAAGCATTAGACCAGCATGTTATTGATTTGTGCATGAGGCA----ATTTGCACCTCTGAATTTCTTTC-CTTTCTGATATCCTCAGATGCA-AAATCTTGAAAAAGAGCATGCAGTC---AGACCTTTATTTGAT--TGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCATTAGCATT-ATTTGTGGAAGATCATAGCAGTGGGAGTTTTTGTCACAGAAATCTT-----GTGACCTTTGTGTTTGGTAGCTATAGACTGCG s panTro5.chr1 126795465 481 + 228573443 CTTACATTGGTACAATTAGGGGTATTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATTGGTAGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTCTG-TGACAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTCC-CTATATTTATATAACAGCAATCTCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTTCACATTAGGCA----ATTTGCACCTCTGAATTGCTTTC-CTTTCTGATATCCCCAGATGCA-AAATCTTGAAAAAGAGCATGCAGTC---AGACCTTTATTTGAT--TGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCATTAGCATT-ATTTGTGGAAGACCATAGCAGTGGGAGTTCTTGTCACAGAAATCTT-----GTGACCTCTGTGTTTGGTAGCTATAGACTGCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55406277 484 - 99763055 CTTACATTGGTACAATTAGGGGTATTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTAGCTGTTGCTGCTTGGAATACATATTGGC----TTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACAGCAATCTCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATGTGATT---ACCTCTGAATTGCTTTC-CTTTCTGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGGTAATTGTTTTTC------CTCT--CT------GTTTCTGTTAGCATT-ATTTGTGAAAGACCATAGCAGTGGAAGTTCTTGTCACAGAAATCCTGTGACGTGACCTCTGCGTTTGGTAGCTATAGACTACA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53552610 483 + 121039945 CTTCCATTGGTACAATTAGGGGTATTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GCAGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACAGCAATCTCACGAAATCGAGCGTTAGACCAGCATGTTATTGATTTGCACATTAGGCATGTGATT---ACCTCTGAATTGCTTTC-CTTTCTGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGATAATAGTTTTTC------CTCT--CT------GTTTCTGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGGGAGTTCTTGTCACAGAAATCTT-----GTGACCTCTGCGTTTGGTAGCTATAGACTGCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146205505 483 - 169600520 CTTACATTGGTACAACTAGGGGTATTAAAGTTGAATTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTTGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGGAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACACCAATCTCATGAAAT-GAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTGTGATATCCTCAGATACA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATTAATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTAGCTATAGACTGCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883076 483 - 171882078 CTTACATTGGTACAACTAGGGGTATTAAAGTTGAATTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTTGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGGAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACACCAATCTCATGAAAT-GAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTGTGATATCCTCAGATACA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATTAATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTAGCTATAGACTGCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26955876 482 + 40200012 CTTACATTGGTACAATTAGGGGTATTAAAGTTGAATTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTTGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGGAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACACCAATCTCATGAAAT-GAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTGTGATATCCTCAGATACA-AAATCTTGAAAGAGAGCATGCAGGC---AGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTAGCTATAGACTGCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4401380 483 - 7633303 CTTACATTGGTACAACTAAGGGTTTTAAAGTTGAATTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTCGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAACTTTCCCTGACAAGAGACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACACCAATCTCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATACTCAGATACA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTAGCTATAGACCGCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36198302 483 + 58131712 CTTACATTGGTACAATTAGGGGTTTTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTTGGTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAATCTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTTC-CTACATTTATATAACACCAATCTCATGAAATGGAGCATTAGACCAGCATGTTATTGATTTACACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTCTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTAGCTACAGACCGCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2593625 483 - 2620224 CTTACATTGGTACAATTAGGGGTTTTAAAGTTGAATTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTCGCTGTTGCTGCTTGGAATACATATTGGCTAAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACACCAATCTCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATACTCAGATACA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTAGCTATAGACCACA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8419188 478 - 10629787 CTTACATTGGTACAATTAGGGGTTTTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACATAGGCTGACTATT-GTTGCTGTTGTTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAAACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACATTTATATAACACCAATCTCATGAAAT-----ATTAGACCAGCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCAGGCAGTC---AGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTGGCTATAGACCGCA i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2358612 483 + 4596561 CTTACATTGGTACAATTAGGGGTTTTAAATTTGAGTTCAT--TGGATTTATGCTTCTCCCCACACAGGCTGACTATT-GTTGCTGTTGCTGCTTGGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAGCTTTCTCTGATAAGAAACCATTTTGGCTCCTGATTATTTGCTTTTCC-CTACGTTTATATAACACCAATCTCATGAAATCGAGCATTAGACCACCATGTTATTGATTTGCACATTAGGCATTTGATT---ACCTCTGAATTGCTGTC-CTTTATGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCATGCAGTC---AGACATTTATTTGATTCTGTTTGATAACTGTTTTTC------CTCT--CT------GTTTCCGTTAGCATT-ATTTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTTACCTCTGCATTTGGTGGCTATAGACCGCA i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108000906 487 - 132174527 CTTACATTGGTACATTTAGGGGTATTAAATTTGAGTTCAT--TGAATTTATGCTTCTCCCCACACAGGCTGACTATT-GTAGCTGTTGGTGCTTAGAATACATATTGGCTTAATTAATCAGT--ACTACTTGGAATTTTGTTGAACATGCAAACTAATTAAGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTGC-CTACATTTATATAACACTAATCTCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTACACATTAGGCATGTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCATGCAGTCAGAAGACATTTATTTGATTCTGTTTGATAATTGTTCTTC------CTCT--CT------GTTTTGGTTAGCATA-ATCTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTGACCTCTGCATTTGGTAGCTGTAAACCGCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10807826 485 + 21366645 CTTACATTGGTACAATTAGGGGTATTAAATTTGAGTTCAG--TGAATTTATGCTTTTCCCCACACAGGCTGACTATT-ATAGCTGTTGCTGCTTAGAATACATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTGTTGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTGC-CTACATTTATATAACACTAATCTCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATGTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATCCTGAGATGCA-AAATCTTGAAGGAGAGCATGCGGTCAGAAGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------TTCT--CT------GTTTTGGTTAGCATA-ATCTGTGGAAGACCATAGCAGTGAGTGTTCTTGTGACAGAAATCTT-----GTGACCTCTGCAAAC--TCACTGTAAACCACA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9317459 486 + 13033340 CTTACTTTGGTACAATTAGGGGTATTAAATTTGAGTTCAT--TGAATTTATGCTTCTCCCCACACAGGCTGACTATT-GTAGCTGTTGCTGCTTAGGATGCATATTGGCTTAATTAATCAGT--ACTATTTGGAATTTTG-TGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTGC-CTACATTTATATAACACTAATCTCACGAAATCAAGCATTAGACCAGCATGTTATTGATTTGCACATTAGGCATGTGATT---ACTTCTGAATTGCTTTC-CTTTATGATATCCTCAGATGCA-AAATCTTGAAGGAGAGCATGCAGTCAGAAGACATTTATTTGATTCTGTTTAATAATTGTTTTTC------CTCT--CT------GTTTTGGTTAGCATA-ATACATAGAAGACCATAGCAATGAGAATTCTTGTGACAGAAATCTT-----GTGACCTCTGTATTTGGTAGCTGTCAACCGCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6399212 487 - 11604778 CTTACATTGGTACAATTAGGGGTATTAAATTTGAGTTCAT--TGAATTTATGCTTCTCCCCACACAGGCTGACTATT-GTAGCTGTTGCTGCTTAGAATACATATTGGCTTCATTAATCAGT--ACTATTTGGAATTTTGTTGAAAATGCAAACTAATTATGAACTTTCCCTGATAAGAGACAATTTTGGCTCCTGATTATTTGCTTTTGC-CTACATTTATATAACACTAATCCCATGAAATCGAGCATTAGACCAGCATGTTATTGATTTGCACCTTAGGCATGTGATT---ACCTCTGAATTGCTTTC-CTTTATGATATCCTCAGATGCA-AAATCTTGAAAGAGAGCATGCAGTCAGAAGACATTTATTTGATTCTGTTTGATAATTGTTTTTC------CTCT--CT------GTTTTGGTTAGCATA-ATCTGTGGAAGACCATAGCAGTGAGAGTTCTTGTGACAGAAATCTT-----GTGACCTCTGCATTTGGTAGCTGTAAACTGCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36224686 485 - 36342412 CTTACATTGGTGCAATTAGGGATATTAAATTTGAGTTCAC--TGGATTTATGTTTCTCCCCAAACAGGCTGACTATT-GTAGCTGTTACTGCCTGGAATACATATTGGCTTAATTAATCAGT--ACTGTTTGGAATTTTG-TGAAAATGCAAACTAATTATGAATTCTTCCTGATAAGAGACCATTTTGGCTCCTGATTATTTGCTTTTGC-CTCCATTTATATAACACTAATCTCATGAAGTCAAGCATTGAAACAGCATGTGATTGATTTGCACATTAGGCATGGGATT---ACCTCGGAATTGCTTTC-CTTTATGATATTCTCAGATGCAGAAGTCTTGACAGAGAGAATGTGGTC---AGACTCAGCTTTGATTCTGTTTGATAATTGTTTCGC------TTCTCACA------GTTTCAGTTAGCATC-AGTT-TGGAAGACTATAGCCATGCACCCTCTTGTGATAGCTACTGT-----GAGACTTCTGGGTATGGGAGCTGTTGACTGCA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58126879 448 - 182113224 CTAACCTTAGTGTAATTAA-GATGTGAAATCTGAATTCAT--TTGGTTTCTGCTCTTCCCC-CTTAACCTGAGGCTT-CTTGCTGCAGCTGTACTGAAAGTGTGTTGGCTTTCCCAGTCAGT--AAGATTTGGAATGTGT-TGCAAATACAAACTGATTCTACACTTTTCCTGATAAG--ACCATTCTGCTTCGGGATTACTCACTTTTGT-GTGCATT--TGTCACATTAACTTCATGAAGTCATGGGTCACA------------------GCACATCAGACGTGT--TC---ATTTCTGAACAGCTTTC-TTTTATGATA-ACTCTGTTTCA-TTGTCTGACCAGAAAA-ATTCCATT---ACAATTTTGCATGGTTCAGTTTGATACTTGATGT--------------CT------ATTTTAGGCAGTGTT-CCTTATCAATGATGATTGCAGTAAGACGCCTC-TGGCAAAACCTTA-----CTGTGTTTTGTGCATAATAGTCATATACTGTT i mm10.chr2 C 0 I 106 s canFam3.chr30 26825599 486 - 40214260 CTTACATTGGGACA-TTAGGACATTACATTTTGAGTTCATGGTAGGATTAT-TTCTTCCTCACATAGATTGAACATT-GTGGCTGCTGCTGTGTCAAATGTGTTTTGGTTTAATTTATCAGT--ACTATTTGGAATCTTG-TGGAAATACATGATTATTATGCACTTTCCCAGATAAGGGACAATTTTGCTTCCTGATTGTTTTCTTTTGC-CTGCTTTTATGTGGCACTGATCTAGTAAAGTCAAGCATTAGACCAGTGTG---TTTATTTTCACATTAGGCATGTGATT---ACCTATGAATTGCTTTT-CTCTATGACATTCTCAGATGTA-AAGCCTTGAAAGAGAGAATGTGGTC---AGACCCTTATTTGATTTTGTTTGATAATAATTTTGCGTCTGTTTCT--CA------GTTTCAGTTGGCATC-ACTTATGGAAGACTCTAGCAGTAAGAGCTCTTAGAACAGTGATCTT-----GTGACTTCTATATATGACAACTGGAGGCTTCA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1083689 472 + 2868945 CTTATATTGGTACAATTAGTGATAATTAATTTGAGTTCAC--CGGATTCATATTCCTCTCAGTGCAGGTTTACTATT-GTAGGGGC----------------TATCGGCTTAACTTATCAGTAAATTATTTGGAATTTTA-TGGAAATATAAACTTATTATGCATTTTCACTGATAAGAGACAATTTTGGCTCCTGATTGTTTTCTTTTGCACAACATTTATATAACACTAATCTCATGAAATCAAGCATTAGATTAGCATGTTACAGATTTGCACATTAGGCA-GTGATA---ACCCCTATATTGCTTTCTTTTTTTAATATTCTCAAATGCA-AAA-CTCAAAGCAGAGAATGTGGTC---AGACACTCAT-TGATTCTGTTTGATAATCATTTGCC------TTCT--CTTTTTCAGTTTTAATTAGCATT-GTTTATGGAAAATTATAGCTGTTAGAG--CTTGTGACAGCAATGTA-----ATGATCCCTGGATACAGCAGCTGTAGACTATG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=2836463.000000 s hg38.chr14_KI270725v1_random 168757 255 + 172810 ATGAGTTTATCTCTTCATAGAGGAAATTGAGAAGAGATTACAGCTACCCACTACCCACACTCTGGTTTTCTTTATGAAGCTTCTGCATAA---------ATCACAACTACATAGCTTCAATGACGGA-CCTAACTCTTGCTTGGAA-------------------------------------------------------------GTGTGGCAGCAGA-GTTGATGGTCATGGATTTAAGCTACAG--TCTCATCACTAGTTTATTTACAGTAAACACTCTGGGGGTGACT-TTTAGTGCTAGGTTCTGTGCTAGACTCTGGTGTTGA s panTro5.chr1 126795946 255 + 228573443 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGCTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATCACAACTACATAGCTTCAATGACGGA-CCTAACTCTTGCTTGGAA-------------------------------------------------------------GGGTGGCAGCAGA-GTTGATGGTCGTGGATTTAAGCTGCAG--TCTCATCACTAATTTATTTATAGTAAACACTCTGGGGGTGATT-TTTAGTGCTAGATTCTGTGCTAGACTCTGGTGTTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55406761 257 - 99763055 ATGAGTTTTTCTCTTCATAGGGGAAGTTGAGAAGAGATTACTGCTACCCACTATCCAAGCTCTGGTTTTCTATACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAGTGAGGGA-CCTAACTCTTGCTTGGAA-------------------------------------------------------------GTGTGGCAGCAGA-GTTGATGGTCATGGATTTAAGCTGCAGTCTCTCATCACTAATTTATTTATAGTAAACATTCTGGGAGTGACT-TTTAGTGCTAGATTCTGTGTTAGACTCTGGTGTTGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553093 251 + 121039945 ATGAGTTTATCTCTTCATAGGGGAAGTTGAGAAGAGATTACTGCTACCCACTACCCAAGCTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAGTGAGGGA-CATAACTCTTGCTTCGAA-------------------------------------------------------------GTGTGGCAGCAGA-GTTGATGGTCATGGATTTAAGCTGCAG--TCTCATCACTAATTTACTTATAGTAAATATTCTGGAGGTGAC-----AGTGCTAGATTCTGTGTCAGACTCTGGTGTTGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146205988 246 - 169600520 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTAGCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAATGAGGGA-TCTAACTCTTTCTTGGAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTTAAGCTACAG--TCTAATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAATGCTAGATTATGTGCTACACTCTCGTGTTGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883559 246 - 171882078 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTAGCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAATGAGGGA-TCTAACTCTTTCTTGGAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTTAAGCTACAG--TCTAATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAATGCTAGATTATGTGCTACACTCTCGTGTTGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26956358 246 + 40200012 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAATGAGGGA-TCTAACTCTTTCTTGGAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTTAAGCTACAG--TCTAATCAC---------TACAGTAAATATTCTGGGGGTGACT-TTTAATGCTAGATTATGTGCTACACTCTCGTGTTGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4401863 246 - 7633303 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAATGAGGGA-TCTAACTCTTTCTTGGAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTGAAGTTACAG--TCTAATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAGTGCTAGATTATGTGCTACACTCTGGTGTTGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36198785 246 + 58131712 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGCTCTGGTTTTCTTTACAAAGCTTCTGTGTAA---------AAGACAACTACATAGCTTCATTGAGGGA-TCTAACTCTTGCTTGGAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTTAACCTACAG--TCTCATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAGTGCTAGATTATGTGCTACACTCTGGTGTTGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2594108 246 - 2620224 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAATGAGGGA-TCTAACTCTTTCTTGGAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTGAAGCTACAG--TCTAATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAGTGCTAGATTATGTGCTACACTCTGGTGTTGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8419666 244 - 10629787 ATGAGTTTATCTCTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAGTGAGGGA-TCTAA--CTTGCTTGGAA-------------------------------------------------------------GTGTGGCCGCTAA-GTTGATGGTCATGGATTTAAGCTACAG--TCTAATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAGTGCTAGATTATGTGCTACACTCTGGTGTTGA i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359095 246 + 4596561 ATGAGTTTATCACTTCATAGGGGAAATTGAGAAGAGATTACTGCTACCCACTACCCAAGGTCTGGTTTTCTTTACAAAGCTTCTGCATAA---------ATGACAACTACATAGCTTCAATGAGGGA-TCTAACTCTTGCTTGAAA-------------------------------------------------------------GTGTGGCAGCTAA-GTTGATGGTCATGGATTTAAGCTACAA--TCTAATCAC---------TACAGTAAACATTCTGGGGGTGACT-TTTAGTGCTAGATTATGTGCTACACTCTGGTGTTGA i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108001393 251 - 132174527 ATGAGTTTATTTCTTCATACGGGAAATGGAGAAGAGATTACTGCTACCCACTACCCAAGCTCTGGTTTTCATTGTAAAGCTTCTGCAAAA---------GTGATAATTGCATA-GTTCAATGAGGGT-CATAACTCTTGCTTGCAA-------------------------------------------------------------GTGTGGTGGCAGA----GATGGTCATGGATTTAAGCTACAG--ACTAATCACTAATTTATTTATAGTAAACATTCTAGGGGTGACT-TTTAGTGCTAGATACTGTGCTAGACTCTAGTGTTGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10808311 250 + 21366645 ATGAGTTTATTTTTTCATAGGGGAAATGGAGAAGAGATTACTGCTACCCAGTACCCAAGCTCTGGTTTTCATTGCAAAGCTTCTGCAAAA---------GTGATAATTGCATA-CTTCAATGAGGAT--GTAACTCTTGCTTGCAA-------------------------------------------------------------GTGTGGTGGCAGA----GATGGTCATGGATTTAAGCTACAG--ACTAATCACTAATTTATTTATAGTAAACATTTGAGGGGTGACT-TTTAGTGCTAGATACTGTGCTAGACTCTAGTGTTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9317945 252 + 13033340 ATGAGTTTATTTCTTCATAGGGGAAATGGAGAAGAGATTACAGCTACCCACTACCTGAGCTCTGGTTTTCATTGCAAAGCTTCTGCAAAA---------GTGATAATTGCATAGCTTCAATGAGGGA-CGTAACTCTTGCTTGCAA-------------------------------------------------------------GTGTGGTGGCAGA----GATGGTCATGGATTTAAGCTACAG--ACTAATCACTAATTTATTTATAGTAAATATTCTAGGGGTGACT-TTTAGTGCTAGATACTGTGCTAGACTCTAGTGTTGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6399699 251 - 11604778 ATGAGTTTATTTCTTCATAGGGGAAATGGAGAAGAGATTACTGCTACCCACTACCCAAGCTCTGGTTTTCATTGCAAAGCTTCTGCAAAA---------GTGATAATTGCATAGCTTCAATGAGGGA-CATAACTCTTGCTTGCAA-------------------------------------------------------------GTGTGGTGGCAGA----GAT-GTCATGTATTTAAGCTACAG--ACTAATCACTAATTTATTTATAGTAAACATTCTAGGGGTGACT-TTTAgtgctagatactgtgctagactctagtgttga i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36225171 263 - 36342412 ATGAGTTTGTCTTTCCACGTGGGGAGCAGGGAAAGAAAGTTTACTACTGAG-ACCCAACCTCTGCCTTTCCTTGCAAAGCTTCTGCATAAGTCATGACTATCATGACTACCCGACTTCAGTGGGGCA-CCTAGCTCTTGCTTCAAA-------------------------------------------------------------ATATGGCAACTGA-GGTAATGGACATGGGTTTAAGTTATAA--TCAAATCACTAACTCGTTTGTAACAAATATTTTGAGGGTAACT-TTTAGTGCTAGATACTGTGATAAACTCTGGGGTTGA i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58127433 316 - 182113224 cTGTGTTTGTGTGTTTATATGGGAAGTAGAGAAATGGTTGATATCATCAATT-TCCAAGTTTTTGTTTGC-CTGCTAAACATCTGCATAA---------ATGACAGCAGCCTGGCTTCAGTAAGAGAGCTTTCCTCTTGCTCGCAATTTTCATTCTTAAATTCAGTGAGATCTGTATAACTCACATATTCAAAGCACAGGAAAATTTATGCAGCATCTGAAATTGATGATTTTGAACTTAGTCTCCAA--TTTAATCACCAGTCCACTCAGGATGAACATTCTGGGGATGCAT-TTTAGTGCTAGGTACTGGGCTGTGTTTCCTAATTGA i mm10.chr2 I 106 C 0 s canFam3.chr30 26826085 232 - 40214260 CTGAGTTTGTCTTTTTGTATAGGAAGCAGAGAAGAGATTACTGTTGC----TACCAGAGCTCTCATTTTGGTTATAATGCTTTTGCACAA---------GTAAC-ATCGCACAGCTTCATTGGAGGT-CCTAAATCTTGAT-GAAT-------------------------------------------------------------GGATGGCAACTGA-GTTGCTGGTTATAGATTTATGTTAGAA--TCTAATCACTAGTTAATTCATAATAAACATTGTGGGCATGACT-GT-----------------ATAGACTATGATATTTA i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1084161 255 + 2868945 ATGATTTTGCCTTTTCAAATGGGAGGCAAGAAAGAGATTATTACAACCCACTAGC-AAGTTCCAGTATTGGTTGCAAAGTTTCTACATAA---------ATGAGAAGGGCATGGCTTCAATGAGGAA-ACTAGCTCTTGCCTACAA-------------------------------------------------------------GTATGACAATTGA-GTCGATGGGCATAGATTCATACTAGAA--ATTAATCATTAATTTATTCACAGTAAACATTTGGGGGGTGAATATTTCATGCTAAATACTGTGCTAGACTGCGTTGTTAA i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=121045.000000 s hg38.chr14_KI270725v1_random 169012 11 + 172810 --------------AATATGTATCA s panTro5.chr1 126796201 11 + 228573443 --------------AATATGTGTCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407018 11 - 99763055 --------------AATATGTGTCA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553344 11 + 121039945 --------------AATATGGGTCA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206234 11 - 169600520 --------------AATATATGTCA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883805 11 - 171882078 --------------AATATATGTCA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26956604 11 + 40200012 --------------AATATATGTCA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4402109 11 - 7633303 --------------AATATATGTCA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36199031 11 + 58131712 --------------AATATATGTCA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2594354 11 - 2620224 --------------AATATATGTCA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8419910 11 - 10629787 --------------AATATATGTCA i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359341 11 + 4596561 --------------AATATATGTCA i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108001644 11 - 132174527 --------------AATATGTGTCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10808561 11 + 21366645 --------------AGTATGTGTCA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318197 11 + 13033340 --------------AATGTGTGTCA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6399950 11 - 11604778 --------------aatatgtgtca i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36225434 11 - 36342412 --------------AATACATGTTG i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58127749 11 - 182113224 --------------AGTATGTACAA i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1084416 25 + 2868945 AAATATggggagcggatgtgtctca i dasNov3.JH579377 C 0 I 178 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e canFam3.chr30 26826317 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=1236279.000000 s hg38.chr14_KI270725v1_random 169023 108 + 172810 GCTA-------TGGCCTCA------GATCTCAAGGCATTAGTTGTGTT-TGTTTGTA--TTGTGTGTTTTGAGGGAGGTGTTAGGTTTTGGTTGAAAGAACAAGGAAGGGGAGCAAGATTTGAG s panTro5.chr1 126796212 108 + 228573443 GCTA-------TGGCCTCA------GCTCTCAAGGGATTAGTtgtgtt-tgtgtgta--ttgtgtgttttgagggaggtgttaggtgttggtTGAAAGAATGAGGAAGGGGAGCAAGATTTGAG i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407029 108 - 99763055 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--TTGTGGGTTTTCAGGGAGGTGTTAGGTGTTGGTTGAAAGAACGAGGAAGGAGGGCAAGATTTGAG i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553355 108 + 121039945 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTtgtgtt-tgtgtgta--ttgtgtgttttgagggaggtgttaggtgttggtTGAAAGAAAGAGGAAGGAGAGCAAGGTTTGAG i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206245 108 - 169600520 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTTTGAGGGAGGTGTTAGGTGTTGGTTGAAAGAATGAGGAAGGAGAGCAAGATTTGAG i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883816 108 - 171882078 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTTTGAGGGAGGTGTTAGGTGTTGGTTGAAAGAATGAGGAAGGAGAGCAAGATTTGAG i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26956615 108 + 40200012 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTTTGAGGGAGGTGTTAGGTGTTGGTTGAAAGAATGAGGAAGGAGAGCAAGATTTGAG i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4402120 108 - 7633303 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTTTGAGGGAGGTGTTAGGTGTTGGTTGAAAGAATGAGGAAGGAGAGCAAGATTTGAG i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36199042 104 + 58131712 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTTTGAGGGAGGTGTTAGGTGTTGG----AAGAATGAGGAAGGAGAGCAAGATTTGAG i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2594365 108 - 2620224 GCTA-------TGGCCTCA------GCTTTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTTTGAGGGAGGTGTTAGGTGTTGGTTGAAAGAATGAGGAAGGAGAGCAAGATTTGAG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8419921 108 - 10629787 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--CTGGGTGTTTTGAGGGAGGTGTTACGTGTTGGTTGAAAGAACGAGGAAGGAGAGCAAGATTTGAG i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359352 108 + 4596561 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGTGTT-TGTGTGTA--GTGGGTGTTCTGAGGGAGGTGTTAGGTGTTGGTTGAAAGAATGAGGAAGAAGAGCAAGATTTGAG i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108001655 108 - 132174527 GCTA-------TGGCCTTA------GCTCTCAAAGCATTAGTTGTGTT-TGAGTGTA--TTGTGTGTTTTGAGGGGGGTGTTAGGTATTGGTTGAGAGGATGAGGAAGGAGAGCAAGATTTGAG i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10808572 108 + 21366645 GCTA-------TGGCCTCA------GCTCTCAAGGCATTAGTTGCGTT-TGTGTGTA--TTGTGTGTTTTGAGGGAGGTGTTAGGTATTGGTTGAGAGGATGAGGAAAGAGAGCAAGGTTTGAG i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318208 108 + 13033340 GCTA-------TGACCTCA------GCTCTCAAGGCATTAGTTGTGCT-TGTGTGTA--TTGGGTGTTTTGAGGGAGGTGTTAGGTATTGGTTGAGAGGATGAGGAAAGAGAGCAAGATTTGAG i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6399961 108 - 11604778 gcta-------tggcctca------gctctcaaggCATTAGTTGTGTT-TGTGTGTA--TTGTGTGTTTTGAGGGAGGTGTTAGATATTGGTTGAGAGGATGAGGAAGGAGAACAAGATTTGAG i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36225445 103 - 36342412 GCTA-------TAGCCTCA------ACTATTAAGA-ATGAGTTGTGTTGTATGTACT--GTGTGTGTTTTGAGAAAGAGGCTAGATAATAG-----AGGAGGAGGAAAGAGAGAAAGGTGTGGT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58127760 116 - 182113224 ACTGACTTCATTAGCCTCAAAAACTACTCTCC---CCTCCTCTCTCTT-TGTGTATG--TTGACTATACTTATGTGTGTG-TATGCTTAAGTAAGGAGGATAAGGAACAATAGCAAG-TTTGAC i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1084619 101 + 2868945 GCTA-------TTACCTCA------ACTCTTAAGGAACTAATTATGTT-TGTCTACACTGTGTGTGTTTTGAAGGAGGGATTTGGTAATGT---------AAAAGAGGGAGAGCAAGGTTTGGG i dasNov3.JH579377 I 178 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e canFam3.chr30 26826317 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=244301.000000 s hg38.chr14_KI270725v1_random 169131 22 + 172810 GAGAAAACAAACATGCACACGT s panTro5.chr1 126796320 22 + 228573443 GAGAAAACAAACATGCACACCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407137 22 - 99763055 GAGAAAACAAATATGTACATGT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553463 22 + 121039945 GAGAAAACAAACATGTACACGT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206353 22 - 169600520 GAGAAAACAAACATGTACACAT i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147883924 22 - 171882078 GAGAAAACAAACATGTACACAT i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 26956723 22 + 40200012 GAGAAAACAAACATGTACACAT i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 4402228 22 - 7633303 GAGAAAACAAACATGTACACAT i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 36199146 22 + 58131712 GAGAAAACAAACATGTACACAT i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 2594473 22 - 2620224 GAGAAAACAAACGTGTACACAT i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 8420029 22 - 10629787 GAGAAAACAAACATGTACACAT i colAng1.NW_012121598v1 C 0 I 1 s rhiBie1.NW_016805531v1 2359460 22 + 4596561 GAGAAAACAAACATGTACACAT i rhiBie1.NW_016805531v1 C 0 I 1 s calJac3.chr10 108001763 21 - 132174527 GAGAAAACAAACATGTACATG- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10808680 22 + 21366645 GAGAAAAAAAACATGTACATGT i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318316 22 + 13033340 GAGAAAACAAACATGTACATGT i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400069 22 - 11604778 GAGAAAACAAACATGTACATGT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36225548 21 - 36342412 GA-AAAACAAACATTTACATCT i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58127876 22 - 182113224 AGGGCATAAAAAATTCACATAT i mm10.chr2 C 0 C 0 s canFam3.chr30 26826317 18 - 40214260 GACTAGACTATCATATAC---- i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1084720 22 + 2868945 GAGAACATAAACAAATACTTTT i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130420817 5449 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=14972.000000 s hg38.chr14_KI270725v1_random 169153 1 + 172810 A s panTro5.chr1 126796342 1 + 228573443 A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407159 1 - 99763055 A i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553485 1 + 121039945 A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206376 1 - 169600520 A i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147883947 1 - 171882078 A i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 26956746 1 + 40200012 A i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 4402251 1 - 7633303 A i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 36199169 1 + 58131712 A i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 2594496 1 - 2620224 A i manLeu1.NW_012108674v1 I 1 C 0 s nasLar1.chr7 130426266 1 - 153844193 A i nasLar1.chr7 I 5449 I 2659 s colAng1.NW_012121598v1 8420052 1 - 10629787 A i colAng1.NW_012121598v1 I 1 C 0 s rhiBie1.NW_016805531v1 2359483 1 + 4596561 A i rhiBie1.NW_016805531v1 I 1 C 0 s calJac3.chr10 108001784 1 - 132174527 A i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10808702 1 + 21366645 A i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318338 1 + 13033340 A i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400091 1 - 11604778 A i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36225569 1 - 36342412 A i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58127898 1 - 182113224 G i mm10.chr2 C 0 C 0 s dasNov3.JH579377 1084742 1 + 2868945 A i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e papAnu3.chr7 140805376 13131 - 162156779 I e canFam3.chr30 26826335 0 - 40214260 C e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=5374488.000000 s hg38.chr14_KI270725v1_random 169154 494 + 172810 --------CGTGGT----------TTCAT-----------TGAATAATCTGCACTTCTGAATTGTCAATACATCAATCTGATTCAGTCATA-ATTGAATTAGAA--------TCATCCTGAGCGCCGGTGGAAAACATTGAA-TATTTTTTTT-----Cacactgaagccagaactcttgggtaccataacccagcaata---ttgtttg-ctggc--tgtcacttaaactcccaaaacacctctgttttatcatctataataaatacaggtacaatattctgttttt----tatatatgtatatatcttgcaaaattattgagatgatgaaaaacga-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAACCAGTG--ATTCCTGTCTTTGTTATCTTCATTATTAAAATTTCTACATAGGTTTTATTTCAGGGA-ttttt-agagtaatgactttgcttatttta--ta---aaaatacttcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaataaatcaacccaaatttt s panTro5.chr1 126796343 490 + 228573443 --------CATGGT----------TTCAT-----------TGAATAATCTGCACTGCTGAATTGTCAATACATCCATCTGTTTCAGCCATA-ATTGAATTAGAA--------TCATCCCAAGCAGTGGTGGAAAACATTGAA-T-TTTTTTTT-----Cacactgaagccagaactcttgggtaccataacccagcaata---ttgtttg-ctggc--tgtcacttaaactcacaaaacacctctgttttatcatctataataaatagagatacaatattctg--ttt----tatatatgtatatatattgcaaaattattgtgatgatgaaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactgaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTACAATTTCTACATAGGTTttatttcagtga-ttttt-atagtaatgactttgcttatttta--t----aaaatacttcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaataaatcaccccaaatttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407160 492 - 99763055 --------CATGGT----------TTCAT-----------TGAATAATCTGCACTTCTGAAATGTCAATACATCCATCTGATTCAGTCATA-ATTGAATTAGAA--------TCATCCTGAGTGGCGGTGGAAAACATTGAA-TATTTCTTTT-----CATGCTGAAGCCAGAACTCTTGGGTACCATAACGAAGCAATA---TTGTTTG-CTGGC--Tgtcacttaaactcacaaagcacctctgttttatcatctataataaatacagatacaatattctg--ttttatatatatatgtacatatcttgaaaaattattgtgatgatgaaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTC----TGTTATCTTCATTATTACAATTTCTGCATAGGCTttatttcagtga-ttttt-atagtaatgactttgcttatttta--ta---caaatacttcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaataaatcaccccaaatttt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553486 488 + 121039945 --------CATGGT----------TTCAT-----------TGAATAATCTGCACTTCTGAAATGTCAATACATCCATCTGATTCAGTCATA-ATTGAATTAGCA--------TCATCCTGAGTGGCGGTGGAAAACATTGAA-TTTTTTTTTT-----Cacactgaagccagaactcttgggtaccataacccagcaata---ttgtttg-ctggc--tgtcacttaaactcacaaagcacctctgttttatcatctataataaatacagatacaatattctg--ttt--tatatatatgtatatatcttgcaaaattattgtgataatgaaaaacga-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTC----TGTTATCTTCATTATTACAATTTCTGCATAGGttttatttcagtga-ttttt-atagtaatgac--tgcttatttta--ta---aaaatacttcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaataaatcaccccaaatttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206377 491 - 169600520 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGGTGGTGGAAAATATGGAA-TATTTCTTTT-----Cacactgaagccagaactcttgggtaccataatccagcaatg---ttgcttg-ctggt--tgtcacttaaagtcacaaagcacctctgttttatcatatataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgcaaaattattg---tgatggaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATAATTTCTGCATAGGTTttatttcagtga-ttttt-atagtaaagactttgcttatttta--ta---aaaatacttcatg---------------------------------ccacagagtacaaaga------aaaca---------------aaataaatcaccccaaatttt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147883948 491 - 171882078 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGGTGGTGGAAAATATGGAA-TATTTCTTTT-----Cacactgaagccagaactcttgggtaccataatccagcaatg---ttgcttg-ctggt--tgtcacttaaagtcacaaagcacctctgttttatcatatataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgcaaaattattg---tgatggaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATAATTTCTGCATAGGTTTTATTTCAGTGA-TTTTT-ATAGTAAAGACTTtgcttatttta--ta---aaaatacttcatg---------------------------------ccacagagtacaaaga------aaaca---------------aaataaatcaccccaaatttt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26956747 491 + 40200012 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGGTGGTGGAAAATATGGAA-TATTTCTTTT-----Cacactgaagccagaactcttgggtaccataatccagcaatg---ttgcttg-ctggt--tgtcacttaaagtcacaaagcacctctgttttatcatatataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgcaaaattattg---tgatgaaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATAATTTCTGCATAGGTTTTATTTCAGTGA-TTTTT-ATAGTAAAGACTTtgcttatttta--ta---aaaatacttcatg---------------------------------ccacagagtacaaagg------aaaca---------------aaataaatcaccccaaatttt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4402252 494 - 7633303 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGCTGGTGGAAAATATGGAA-TATTTCTTTT-----Cacattgaagccagaactcttgggtaccataatccagcaatg---ttgcttg-ctggc--tgtcacttaaagtcacaaagcacctctgttttatcatatataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttacaaaattattgtgatgatgaaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATAATTTCTGCATAGGTTTTATTTCAGTGA-TATTT-ATAGTAAAGACTTtgcttatttta--ta---aaaatacttcatg---------------------------------ccacagagtacaaaga------aaaca---------------aaataaattaccccaaatttt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36199170 493 + 58131712 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAACTAGAA--------TCTTCCTGAGTGGGGGTGGAAAATATCGAA-TATTTCTTTT-----Cacactgaagccag-actcttgggtaccacaatccagcaata---ttgtttg-ctggc--tgtcacttaaagtcacaaagcacctctgttttatcatctataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgcaaaattattgtgatgatgaaaaacga-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTGTGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATACTTTCTGCATAGGTTTTATTTCAGGGA-TTTTT-ATAGTAAAGACTTtgcttatttta--ta---aaaatacttcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaataaatcaccccaaatttt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2594497 494 - 2620224 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGGTGGTGGAAAATATGGAA-TATTTCTTTT-----Cacattgaagccagaactcttgggtaccataatccagcaatg---ttgtttg-ctggc--tgtcacttaaagtcacaaagtacctctgttttatcatctataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgcaaaattattgtgatgatgaaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATAATTTCTGCATAGGTTttatttcagtga-ttttt-atagtaaagactttgcttatttta--ta---aaaatacttcatg---------------------------------ccacagagtacaaaga------aaaca---------------aaataaattaccccaaatttt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8420053 493 - 10629787 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACATTCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGGTGGTGGAAAATATCGCATTTTTTTTTTT-----Cacactgaagccagaactcttgggtaccataatccagcaata---ttgtttg-ctggc--tgtcacttaaagtcacaaagcac--ctgttttatcatatataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgtaaaattattgtgatgatgataaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTATTATAATTTCTGCACAGGTTttatttcagtga-ttttt-atagtaaagattttgcttatttta--ta---aaaatacttcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaacaaatcaccccaaatttt i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359484 492 + 4596561 --------CATAGT----------TTCAC-----------TGAATAATCTGCACTTCTGAAATGTCAATACAATCATCTGATTCAGTAATA-ATTGAATTAGAA--------TCTTCCTGAGTGGTGGTGGAAAATGTCGAA-TATTTCTTTT-----Cacactgaagccagaactcttgggtaccataatccagcaata---ttgtttg-ctggc--tgtcacttaaagtcacaaagcacctctgttttatcatatataataaatacagatacaatattctg--ttt--tatatgtatgtatatatcttgcaaaattattgtgatgatggaaaacat-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCTATGTAAGCAGTG--ATTCCTCTCTTTGTTATCTTCATTA--ATAATTTCTGCATAGGTTttatttcagtga-ttttt-atagtaaagattttgcttatttta--ta---aaaatacctcatg---------------------------------ccaaagagtacaaaga------aaaca---------------aaataaatcaccccacatttt i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108001785 537 - 132174527 --------CATGGT----------TTCAT-----------TGAATACTCTGCACTTTCAAAATGCCAGTACATCCATCTAATTCAGTCATA-ATTGAATTAAAA--------ACATCCTGAGTGGAAGTGGAACACATTGAG-TAGTTTTTTT-----Cacactgaagccagaactcttgggtgccatgacccagcaata---ttgtttg-ctggc--tgtcacttaaactcacaaagtacctcagttttatcatctataataaatacagatacattattctg--ttt--tatatatatgtatatatcttgcaaaattattgtaatgatgaaaaacaa-aatgt-aatacacactgaataatgcatagaagatg--gtaagcactaaataaatgACGATGTAAACAGTG--ATTCCTCT-TTTGTTATTTCCATTATTACAATTTCTGCATAGATTTTATTTCAGTGACTTTCT-ACAGTAATAACTTTGCTTATTTTA--TTAAAAAAAAACTTCATGCTTAATAT------TTTAAA--ATTGAGCAATACCAAAGACTACAAaaa------taataaataaataaataaataaataaatCGCTCCAAATTTT i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10808703 519 + 21366645 --------CATGGT----------TTCAT-----------TGAATAGTCTGTACTTTCAAAATGCCTATACATCCATCTAATTCAGTCATA-GTTGAATTAAAA--------TCATCCTGAGTGGCAGTAGAACATATTGAG-TAGTTTTTTT-----Cacactgaagccagaactcttgggtgccataacccagcaata---ttgtttg-ctggc--tatcacttaaactcacaaagcacctctgttttatcatctatagtaaatacagatacaatattctg--ttt--tatatatatgtatatattttgaaaaattattgtaatgatgaaaaacaa-agtgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCAATGTAAACAGTG--ATTTCTCT-TTTGCTATTTTCATTATTACAATTTCTGCATAGATTTTATTTCAGTGACTTTTT-ACagtaatgacttcgcttatttta--tt---aaaaaacttcatgcttagtat------tttaaa--tctgagcaataccaaagactacaaaga------aaaca---------------aaataaatcaccccaaatttt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318339 520 + 13033340 --------CGTGGT----------TTCAT-----------TGAATAGTCTGTACTTTCAAAATGCCAATACATCCATCTAATTCAGTCATA-ATTGAATTAAAA--------TCATCCTGAGTGGCAGTGGAACATATTGAG-TAGTTTTTTT-----Cacactgaagccggaactcttgggtgccataacccagcaata---ttgttct-ctggc--tgtcacttaaactcacaaggcacctctgttttaacatctataataaatacagatacaatattctg--ttt--tatatatatgtatatatcttgcaaaattattgtaatgatgaaaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCGATGTAAACAGTG--ATTTCTCT-TTTGCTATTTTTATTATTACAATTTCTGCATAGACTTTATTTCAGTGACTTTTT-ACagtgatgactttgtttatttta--ta--aaaaaaacttcatgattagtat------tttaaa--ttttagcaataccaaagactacaaaga------aaaca---------------aaataaatcaccccaaatttt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400092 518 - 11604778 --------CATGGT----------TTCAT-----------TGAATAGTCT--ACTTTCAAAATGCCAATACATCCATCTAATTCAGTCATA-ATTGAATTAAAA--------TCATCCTGAGTGGCAGTGGAACATATTGAG-TAGTTTTTTT-----CAAActgaagccagaactcttgggtgccataacccagcaata---ttgtttg-ctggc--tgtcacttaaactcacaaagcacctctgttttatcatctataataaatacagataaaatattctg--ttt--tatatatatgtatatatcttgcaaaattattgtaatgatg-aaaacaa-aatgt-aatacacactgaataatgcatagtagatg--gtaagcactaaataaatgGCGATGTAAACAGTG--ATTCCTCT-TTTGCTATTTTCATTATTACAATTTCTGCATAGATTTTATTTCAGTGACTTTTT-ACAGTAATGACTTTGCTTATTTTA--TA-AAAAAAAATTTCATGCTTAGTAT------TTTAAA--TTTGACCAATACCAAAGACTACAAAGG------AAACA---------------AAATAAATCACCCCAAATTTT i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36225570 516 - 36342412 --------CACGGTTCACGATAAATTCAT-----------TGAATAGTCTATGCTGCTGAAATGCCAGTATATCCAGTGGATTCTGTCATA-ATTAGTTTGTAACTGTACTGTCATCATGAGTGGCAGTAAAAGATATAGAA-TCTTTTTTTTTTTTCCacattgatgccagcagatctgggtaccatatcccagcaata---tcatttgtttggccatgtc-cctaaactcacaaag-----ctgtttcctcaccta----aaaaatagatacaataattga--ttt--tcta------tatagctcttgcaaaattatggtgatgattaaaaagca-aatgt--atacgcgatgaatattgcatgatctatgataTAGGTACTAAGGAAGTGGCTATGGAAATGCCT--ATTCCTCT------TAT-TCCATTATTATAATTTCTGCATAGCTTTCATTTAAGTGA-TTTTT-ATACTAATAGGCTTGCTTATGTTA--T----AAAATACTAAATGCTTGTTAT------TTTAAG--CCTGAGCAATACCCCAAAGTTCCAA------------A---------------AAATAAATCACCCCAAATTAC i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58127899 488 - 182113224 ---------TCAGT----------TTTACAAGGAGTCAAGTTTGTAGTATATCTTTTTGAAATGCCAATGTACCCATCTGATTCAGTCATATGATAAATTGGAA---------CAATGTGAATGCTTCTAGGACATACAGAT-TCCTGCTA-------CACTTGGACATCAGCACACATAGATACCACATCCTAGAAACACATCTGTTTG-CTA----TGCCAT------------AGCACCTGCATTTTACTATGCAT--TGAATAGGTATAAAA---TTTA--TTT--TATATGC--------CTCACCTAAAGTTATTGTGATAATTAAAAACACTAATAT-AATACAAACAGAATTATGGATAAT-------ATAAGTACCAAATAAG-AGCTATGAAACAACTG--TT-------TTTATTATTTTCATTGTTATAATACCTGTATGGATCTCATTTAGTTGA--TTTT-ATAGCAATGGTTTTCCCTTTTTAA--TA---AAAATGCCatatatttaatat-----attaaaa--attGAGCA---ATAGTGAATGTGCAAA------GAAAA---------------AATCAAATCACCAAAAATTTC i mm10.chr2 C 0 C 0 s canFam3.chr30 26826335 457 - 40214260 ------------------------------------------------CTGTACCTATGAAATGCCAGCACACCCATCTGATTCAATAAGA-ACTGAACTTGAA--------TCATTGTAGGTGGCAGTGGATTATATCAGA-TTTTTTTCTT---------------TCAGA---CTTGGGAACCATATCCCAACAATA--TTTGTCTG-ttggttatgccacttgaactcacaaaacacttctgtttactcattta-----aaaatagata-----ttctg--ttt--tataggctt------cacttgtaaagttattgtcatgattagaaaata-aatatggatggatacacagtaatgcataatataca--gtaggtactaaataaGCTACTAT------ACCT--ATTACTTT-TTTGTTATTTTCATCAT---AATTCATG------TTTCATCTAAGTGA-TTTTT-GTAGTAA---CTTTACTTT------------TGAATACTACATGCTTATTCttattattttaaaatttttaacagt-ttataaaataaGAAAC------AAGGAG--------------AAACAAGTTACCCAGAATTGC i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1084743 513 + 2868945 CAGTGGTTCATGAT-------GAGTTCTT-----------TGAAGAGTCTGGACTTTTGAAATGCCAGTGCACTCATCTGGTTCTGTCATA-ATTGAATTCGAA-------ATCATTGTGGGTGGTAGTGGAGCATA------TATTTTTCTC-----CActctgaagccaacagacttggggtccacatctcagcaata---ctacctt-ttgcccatgccacttaaattgataaattacctctgtttcttctttga-----aaaatcggtaagatatt--g--ttt--caca------aacctctcttgcaaaattgttgtgataataagaa-----aatgt-aa-gcacacacaataaggcatactatatg--gtatacactaaatgcATTGCTACTAAAAAAGAGGCATTCCTTT-TTAAAAATATTCCTTATTATTATCTCTTCATACATTTAATTTCAATGA-tttataatagtaatggctttactttatttaagta---aaaatgctacttgcttattgt---------------ttgaacaacaccaagaagtacaaagaaaaaacaaaca---------------aaaggaatttcaccaactgtt i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e tarSyr2.KE933570v1 112527 4503 + 145891 I a score=13899.000000 s hg38.chr14_KI270725v1_random 169648 1 + 172810 t s panTro5.chr1 126796833 1 + 228573443 c i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407652 1 - 99763055 c i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553974 1 + 121039945 c i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206868 1 - 169600520 c i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147884439 1 - 171882078 c i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957238 1 + 40200012 c i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4402746 1 - 7633303 c i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36199663 1 + 58131712 c i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2594991 1 - 2620224 c i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8420546 1 - 10629787 c i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359976 1 + 4596561 c i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002322 1 - 132174527 C i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809222 1 + 21366645 c i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318859 1 + 13033340 c i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400610 1 - 11604778 C i aotNan1.NW_018501505v1 C 0 C 0 s tarSyr2.KE933570v1 117030 1 + 145891 t i tarSyr2.KE933570v1 I 4503 N 0 s otoGar3.GL873530 36226086 1 - 36342412 C i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58128387 1 - 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr30 26826792 1 - 40214260 C i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1085256 1 + 2868945 c i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=47966.000000 s hg38.chr14_KI270725v1_random 169649 11 + 172810 agaaacaacca s panTro5.chr1 126796834 11 + 228573443 agaaacaataa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407653 10 - 99763055 agaaac-acca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553975 11 + 121039945 agaaacaacca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206869 11 - 169600520 agaaaaaaaca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147884440 11 - 171882078 agaaaaaaaca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957239 11 + 40200012 agaaaaaaaca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4402747 11 - 7633303 agaaaaaaaca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36199664 11 + 58131712 agaaaaaaaca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2594992 11 - 2620224 agaaaaaaaca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8420547 11 - 10629787 agaaaaaacca i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359977 11 + 4596561 agaaaaaaaca i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002323 10 - 132174527 A-AAATAATCA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809223 10 + 21366645 a-aaatagcca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318860 10 + 13033340 a-aaataacca i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400611 10 - 11604778 A-AAGTAACCA i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36226087 1 - 36342412 ----------A i otoGar3.GL873530 C 0 C 0 s mm10.chr2 58128388 11 - 182113224 GAAAAGAGCCA i mm10.chr2 C 0 N 0 s canFam3.chr30 26826793 11 - 40214260 AGATATAACCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1085257 3 + 2868945 --------aca i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=3395710.000000 s hg38.chr14_KI270725v1_random 169660 333 + 172810 atgttaactgttggtggaattcattTGGGTGA----TTTTT--TTTGTTTCTTCTTTGCACTTTTTGGTATTTTTCAAGTTTAAAAG-GAATAAGTAGATACAATTATTATAATAGCTGTAAAATAGTTATATGT-GTTTCAAAT-TTCATAC-TCCAAAAAGTTTGGATATA----------GATGGA------------------AGATAACATAACTatatgtatagtgagagagagagag------------ctagcagaatagata--aaacataattttataataaaagaatactatatctgcttttttaattggaagtatt-aaatttaTCTATGTAACTGCATTATTTCCTAAAAGGTCACATTTTAA---------------AAAAATTTTA- s panTro5.chr1 126796845 332 + 228573443 atgttaacagttggtggaattcatttgggtga---tttttt--tttgtttcttctttacactttttggtatttttcaagtttaaaag-gaataagcacatacaattattataatAGCTGTAAAATAGTTATATGT-GTTTCAAAT-TTCATAC-TCCAAAAAGTTTGGATATA----------GATGGA------------------AGAT-ACATAATAATATGTATAGTGAGAGAGAGAGAG------------CTAGCATAatagata--aaaaataattttataataaaagagtactatatctgctttttaaattggaagtatt-aaatttaTCTATGTGACTGCATTATTTCCTAAAAGGTCACA-TTTAA---------------AAAAAAATTA- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407663 330 - 99763055 atgttaacagttggtggaattcatttgggtga--ttttttt--tttgtttcttctttgcattttttggtactattcaagtttaaaag-gaataggcatatacaattattataatAGCTGTAAAATAGTTATATGT-GTTTTAAAT-TTCATAC-TCCAAAAAGTTTGGATATA----------GATAGA------------------AGAT-ACATAACTATATGTATATT--GAGAGAGAGAG------------CTAGCAGAATGGATA--AAAAATAATTTTATAATAAAAGAATACTATATCTG-TTTTTTAACCGGAAGTATT-AAATTTATTTATGTAACTTCATTATTTCCTAAAAGGTCACA-TTTAA---------------AAATTTTTAA- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53553986 333 + 121039945 atgttaacagttggtggagttcatttgggtgattttttttt--gttgtttcttctttgcactttttggtattattcaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatatgt-gttttaaaT-TTCATAC-TCCAAAAAGTTTGGATATA----------GATAGA------------------AGAT-ACATAACtatatgtatatt--gagagagagag------------ctagcagaatagata--aaaaataattttataataaaagaatactatatctgcttttttaactggaagtatt-aaatttatttatgtgaCTACATTATTTTCTAAAAGGTCACA-TTTAA---------------AAAAATTTTT- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146206880 330 - 169600520 atgttaacagttggtggaatgcatttgggtga----ttttt--tttgtttcttctttgcac-ttttggtattattgaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAGAAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACTATATGTATATT--GAGAGAGCGAG------------CTAGCAGAATAGATA--AAAAATAATTTTATAATAAAAGAATACTATATTTGCTTTTTTAACTGGAAGTATT-AGATTTATTTAGGTGACTTCATTATTTCCTAAAAGGTCACATTTTTT--------------AAAAAAAATTA- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147884451 330 - 171882078 atgttaacagttggtggaatgcatttgggtga----ttttt--tttgtttcttctttgcac-ttttggtattattgaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAGAAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACTATATGTATATT--GAGAGAGCGAG------------CTAGCAGAATAGATA--AAAAATAATTTTATAATAAAAGAATACTATATTTGCTTTTTTAACTGGAAGTATT-AGATTTATTTAGGTGACTTCATTATTTCCTAAAAGGTCACATTTTTT--------------AAAAAAAATTA- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957250 330 + 40200012 atgttaacagttggtggaatgcatttgggtga----ttttt--tttgtttcttctttgcac-ttttggtattattcaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAGAAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACTATATGTATATT--GAGAGAGCGAG------------CTAGCAGAATAGATA--AAAAATAATTTTATAATAAAAGAATACTATATTTGCTTTTTTAACTGGAAGTATT-AGATTTATTTATGTGACTTCATTATTTCCTAAAAGGTCACATTTTTT--------------AAAAAAAATTA- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4402758 329 - 7633303 atgttaacagttggtggaattcatttgggtga----ttttt--tttgtttcttctttgcac-ttttggtattattcaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAATAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACTATCTGTATATT--GAGAGAGCGAG------------CTAGCAGAATAGATA--AAACATAATTTTATAATAAAAGAATACTATATTTGCTTTTTTAACTGGAAGTATT-AGATTTATTTATGTGACTTCATTATTTCCTAATAGGTCACATTTTTT---------------AAAAAAATTT- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36199675 328 + 58131712 atgttaacagttggtggaattcatttgggtga----ttttt--tttgtttcttctttgcac-ttttggtattattcaagtttaaaag-gaataagcacgtacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAAAAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACTATATGTATATT--GAGAGAGCGAG------------CTAGCAGAATATATA--AAAAA-ATTTTTATAATAAAAGAATACTATATTTGCTTTTTTAACTGGAAATATT-AAATTTATTTATATGACTTCATTATTTCCTAAAAGGTCACATTTTTA---------------AAACAAATTT- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2595003 329 - 2620224 atgttaacagttggtggaattcatttgggtga----ttttt--tttgtttcttctttgcac-ttttggtattattcaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAATAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACTATATGTATATT--GAGAGGGCGAG------------CTAGCAGAATAGATA--AAAAATAATTTTATAATAAAAGAATACTATATTAGCTTTTTTAACTGAAAGTATT-AAATTTATTTATGTGACTTCATTATTTCCTAAAAGGTCACATTTTTT---------------AAAAAAATTT- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8420558 330 - 10629787 atgttaacagttggtggaattcatttgggtga----ttttt--tttgtttcttctttgcactttttggtattattcaagtttaaaag-gaataagcacatacaattattataatagctataaaatagttatATGT-GTTTCAAAT-TTCATAC-TTCAAAATGTTTGTATATA----------GATGGA------------------AGAC-ACACAACCATGTGTATATT--GAGAGAGCGAG------------CTAGCAGAATAGATA--AAAAATAATTTTATAATAAAAGAATACTATATTTGCTTTTTTAACTGGAAGTATT-AAATTTATGTATGTGACTTCATTATTTCCTAAAAGGTCACATTTTTA---------------AAAAAATTTT- i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2359988 304 + 4596561 atattaacagttggtggaattcatttgggtga----ttttt--tttgtttcttctttgtactttttggtattattcaagtttaaaag-gaataagcacatacaattattataatagctgtaaaatagttatATGT-GTTTCAAAT-TTCATGC-TTCAAAAAGTTTGGATATA----------GATGGA------------------AGAC-ACATAACCACGTGTATATT--GAGAGAGCGAG------------CTAGCAGAATAGATA--AAACATAATTTTATAATAAAAGAATACTATATTTGCTTTT-------------------------AATGTGACTTCATTATTTCCTAAAAGGTCACATTTT-----------------AAAAAAATTA- i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002333 329 - 132174527 ATGTTAACAGTTGGTAGAATTCATTTGGGCGA----TTTTTTGTTTATTTGTTCTTTGCATTTTTTGGTATTATTCAAGTTTAAAAG-GAATAAGCACATAACCTTATTATACTAGGTGTAAAATAGTTATATGT-GTTTCAAAT-TTCATAC-TCCCAAAAGTTTGGATATA----------TCTGGA------------------agat-acatatctatgtgtatatt--gagagagagag--------------atcagaatagata--aaaaataattttaaaataagagaatactatatctgcttctttaactggaagtatt-aaatttttttatgtgactttaTTATTTCCTAAAAGGTCACa-tttta---------------aaaaatatat- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809233 332 + 21366645 atgttaacagttggtggaattcatttgggtga----ttttt--tttgtttcttctttgcactttttggtattattcaaatttaaaag-gaataagcacataaaattattataacaggtgtaaaatagttatATGT-GTTTCAAAT-TTCATAC-TCCCAAAAGTTTGGATATA----------GCTGGA------------------AGat-acatatctatatgtatatt--gagagagagag----------agatagcagaatagata--aaaaataattttaaaataagagaatactatatctgcttctttaattggaagtatt-aatttttttaatgtgacttCATTATTTCCTAAAAGGTCACattttta---------------aaaaatatat- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9318870 342 + 13033340 atgttaacagttggtggaattcatttgggtga----tttta--tttgtttcttctttgcactttttgatattattcaaatttaaaaa-gaataagcacataaaattattataataggtataaaatagttatATAT-GTTTCAAAT-TTCATAC-TTCCAAAAGTTTGGATATA----------GCTGGA------------------agat-acatatctatatgtatatt--gagagagagagagagagagagagatagcagaatagata--aaaaataactttaaaataagagaatactatatctgcttctttaactggaagtattaaattttttttatgtgacttcaTTATTTCCTAAAAGGTCACA-TTTTT---------------AAAAATATAT- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400621 334 - 11604778 GTGTTAACAGTTGGTGAAATTCATTTGGGTGA----TTTTTTTTTTGTTTCTTCTTTGCACTTTTTGGTATTATTCAAGTTTAAAAG-GAATAAGCACATAAAATTATTATAATAGGTGTAAAATAGTTATATAT-GTTCCAAAT-TTCATAC-TCCCAAAAGTTTGGATATA----------GCTGGA------------------AGAT-ACAtatctatatgtatatt--gagagggagag--------agagatagcagagtagata--aaaaataattttaaaataaga-aatactatatctgcttctttaactggaagtatt-aaatttttttatgtgacttcaTTATTTCCTAAAAGGTCACA-TTTTA---------------AAAAATATAT- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36226088 352 - 36342412 GAAGTAACAGTTGGTAAGATTCATTTGGGGTA----ATTTT--TT--TTTCTTCATTGCATTTTCTGGTGTTATTCAAATTTAAAAGTAAATAAATAACTACAATTATTGTAAAAGCTACAAAATAATTATATGT-GTTTCAAAT-TTCATAC-TATAAAATGCTTGGATAGATATGCATACTGATGGAATATATGTGTGTGTTTATAAAC-ACATATGTATACATTTGTC--TATAGAAAAAG------------ACA----AATATATG--AAA---AATTTT---ATAGGAGAATATTATATCTGTTTCTTTAA----GAATACT-ACATTTATTTATTTGACTTCA-tatttccccaaagaccatgcttttattaagaaaag----gaaaaatatg-- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26826804 300 - 40214260 GTGTTGA--GCTGGCAAAATTCATTTTGG--A------TTA--TTTATTTCTTCTTTGTACTTTTTGGTG---TTCAAATTTAAAAC-TAATAAGTATGTACTGTT--------AGTTGTAAA--AGTTACATAT-GTTTCAAAT-TTTACACATCCTAAAAGTCTGCAT-TG----------ATTGGT------------------AGAT-ATGTGTATAGATGGATATA--TAAAGAATATA------------------GAATACATAAGAAAAATAGTTTTATAATAAGAGAG-------TCTACTATTTTAAATAAAAGGACT-ACATTTATTT-----ACTTCTttatttcctaaaagattatactttta------ttaa----gaaaaaaatat- i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1085260 323 + 2868945 ---ttggttatttttggcaat--tttaggtgg----tatgt--ttgtttctttgtttgtactttttagtatttttcatatttaaaat-taataagcatgtactattattgtaaaagttataaagtatttatttgtggttttaaaTATTCATAT-ATCCAAAA----GGATA-a----------gataga-----------------tagat-atgcatatagatgaagatg--gatatatagag------------atagaagaatagata--tga--taATTTT---ATAAAATAATTCTGTCTCTGCTATTTTAA----GAGGGCT-GCATTCATTTAATTGATTTCATTATTTCCTAA-AGATCTTATTTTTA------TTAAGTGCAAGAAAAATAAG i dasNov3.JH579377 C 0 C 0 e eulFla1.LGHW01000825v1 863106 13338 - 1089701 I e eulMac1.LGHX01000819v1 854837 13125 - 1078805 I e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=263952.000000 s hg38.chr14_KI270725v1_random 169993 19 + 172810 AAAAACATTAGAAGATTGA s panTro5.chr1 126797177 19 + 228573443 AAAAACATTAGAAGATTGA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55407993 19 - 99763055 AAAAATATTAGAAGATTGA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53554319 19 + 121039945 AAAAATACTAGAAGATTGA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146207210 19 - 169600520 AAAAATATTAGAAGACTGA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147884781 19 - 171882078 AAAAATATTAGAAGACTGA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957580 19 + 40200012 AAAAATATTAGAAGACTGA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4403087 19 - 7633303 AAAAATATTAGAAGATTGA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200003 19 + 58131712 AAAAATATTAGAAGATTGA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2595332 16 - 2620224 AAAAATATT---AGATTGA i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8420888 19 - 10629787 TTAAATATTAGAAGATTGA i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2360292 19 + 4596561 AAAAATATTAGAAGATTGA i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002662 19 - 132174527 aaaaatattaGGAGATTGA i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809565 19 + 21366645 aaaaGTATTAGGAGATTGA i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9319212 19 + 13033340 AAAAATATTAGGAGATAGA i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400955 19 - 11604778 AAAAATATTAGGAAATTGA i aotNan1.NW_018501505v1 C 0 C 0 s eulMac1.LGHX01000819v1 867962 19 - 1078805 AAAAACATTAGGTGACTGG i eulMac1.LGHX01000819v1 I 13125 N 0 s eulFla1.LGHW01000825v1 876444 19 - 1089701 AAAAACATTAGGTGACTGG i eulFla1.LGHW01000825v1 I 13338 N 0 s otoGar3.GL873530 36226440 19 - 36342412 aaaaacattaggtgattgg i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827105 19 - 40214260 aaaaacagtaggtgattga i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1085583 19 + 2868945 AAAAACATTAGGTGATTTT i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=1579116.000000 s hg38.chr14_KI270725v1_random 170012 156 + 172810 GTCATTATAATTTATTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAT-----ATATATTTAATGTCAAACCTT-AGG-----AAAATGTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAC-A s panTro5.chr1 126797196 152 + 228573443 GTCATTCTAATTTATTTCTTAAATTTTAa-------------tatatgtatatctatgaataatt------tatgc--ataaacat-----atata--taATGTCAAATCCT-AAG-----AAAATGTATACAC--------CTTAAAGAATTATCACAAAACAAATACCTTCACAA--------------------CTACCACTCAGAATAAC-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408012 155 - 99763055 GTCATTATAATTTCTTTCTTAAATTTTAa-------------tatatctatatctatgaataatt------tatgc--ataaatat-----atatatgtaAGGTCAAGTCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCGCAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i panPan2.chr15 C 0 I 4 s nomLeu3.chr6 53554338 153 + 121039945 GTCA---TAATTTCTTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAT-----ATATATGCAAGGTCAAGTCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i nomLeu3.chr6 C 0 I 6 s rheMac8.chr7 146207229 156 - 169600520 GTCATTTTAATTTCTTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147884800 156 - 171882078 GTCATTTTAATTTCTTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i macFas5.chr7 C 0 I 2 s macNem1.NW_012010577v1 26957599 156 + 40200012 GTCATTTTAATTTCTTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4403106 156 - 7633303 GTCATTTTAATGTCTTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCTACAA--------------------CTACCACTCAGAATAAT-A i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 36200022 156 + 58131712 GTCATTTTAATTTCTTTCTTAAATGTTAAT------------TATATGTATATCTATGAATACTT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i chlSab2.chr26 C 0 I 2 s manLeu1.NW_012108674v1 2595348 156 - 2620224 GTCACTTTAATTTCTTTCTTAAATTTTAAT------------TATATGTATATTTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATCATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATAAT-A i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8420907 149 - 10629787 GTCATTTTAA----TTTCTTAAATTTTAGT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTGAAGGAATTATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATA---- i colAng1.NW_012121598v1 C 0 I 1 s rhiBie1.NW_016805531v1 2360311 153 + 4596561 GTCATTTAAATTTCTTTCTTAAATTTTAAT------------TATATGTATATCTATGAATAATT------TATGC--ATAAACAC-----ATATATGTAAGGTCAAATCCT-AAG-----AAAATTTATACAC--------CTTAAGGAATGATCACAAAACAAATACCTCCACAA--------------------CTACCACTCAGAATA---- i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002681 163 - 132174527 ATCATTACAGTTTCTTTCTTAAATTTTAGCt--atatatatatatatatatatatgtaaataATT------TATTC--ATAAAC-------ATATAGGTAGGGCCAAATCCT-CAG-----AAAATTTATACGG--------CTTAAGGAATTATCACAAAACAAGTACCTCCACAA--------------------CTATTGCTCAGAATAAT-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809584 152 + 21366645 ATCATTATAGTTTCTTTCttaaattttagt--------------tatatatatatgtaaataatt------tattt--ataaaC-------ATATATGTAGGGCCAAATCCT-AAG-----AAAATTTATACAG--------CTTAAGGAATTATCACAAAAAAAATACCTCCACAA--------------------CTATTGCTCAGAATAATA- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9319231 166 + 13033340 ATCATTATAGTTTCTTTCTTAAATTTTAGTtacatatatacatatatatatatatgtaaataatt------tattc--ataaac-------atatatttaGGGCCAAATCCTAAAA-----AAAATTTATACAG--------CTTAAGGAATTATCACAAAACAAATAACTCCACAA--------------------CTATTGCTCAGAATAAT-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6400974 149 - 11604778 ATCATTATAGTTTCTTTCTTAAATTTTAGT----------------tatatatatgtaaataatt------tattc--ataaac-------atatatgtaGGGCCAAATCCT-AAG-----AAAATTTATACAG--------CTTAAGGAATTATCACAAAATAAATACCTCCACAA--------------------CTATTGCTCAGAATAAT-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36226459 177 - 36342412 gtcattaGAGTTTGTTTCTTAAAT-TTAAT------------TATATGTATATTGATATATAATT------CATGCATATAAATAT-----GTATACACAGGCCCAAAATAT-AAA-----AAGACTTATACAG--------CTTAAGAAATGATCACAAAACAAATACCACAGCAAAACCACTGTGAACAATACATATACCTCTCAGAACAAG-A i otoGar3.GL873530 C 0 I 2 s canFam3.chr30 26827124 165 - 40214260 ggcattataatttCCTTGTTAAATTTTAAT------------TATATGTATATATGTGTGTTATT------CACAC--ATAAATGTGTATAGTATATATAAAGCCAAGATAA-AGGTACATGAAATTTATATAG--------CTCAAGGAATTATAACAAAATAAATATTTTAGCAA--------------------CTACCACTCAGGTGAGG-- i canFam3.chr30 C 0 I 2 s dasNov3.JH579377 1085602 168 + 2868945 ATCATTATTGTATCATTTTAAAATTCCAAT------------------TATATCTGTACATAATTCACATACATGC--ATAGATAT-----GTATGTGTAATGACAAAACAA-ATGTGCA-CACATGCATACATGTGATAAATTCAATGAATTATCACAATACAAACAGATCATCAT--------------------CCACAACCCAAAAAAAA-A i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5832297 2609 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=-31722.000000 s hg38.chr14_KI270725v1_random 170168 3 + 172810 -TGT s panTro5.chr1 126797348 3 + 228573443 -TTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408171 3 - 99763055 -TTT i panPan2.chr15 I 4 C 0 s ponAbe2.chrUn 5834906 3 + 72422247 -TTT i ponAbe2.chrUn I 2609 I 764 s nomLeu3.chr6 53554497 3 + 121039945 -TAT i nomLeu3.chr6 I 6 I 1 s rheMac8.chr7 146207386 3 - 169600520 -TTT i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147884958 3 - 171882078 -TTT i macFas5.chr7 I 2 C 0 s macNem1.NW_012010577v1 26957755 3 + 40200012 -TTT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4403263 3 - 7633303 -TTT i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 36200180 3 + 58131712 -TTT i chlSab2.chr26 I 2 C 0 s manLeu1.NW_012108674v1 2595504 2 - 2620224 --TT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421057 3 - 10629787 -TTT i colAng1.NW_012121598v1 I 1 C 0 s rhiBie1.NW_016805531v1 2360464 3 + 4596561 -TTT i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002844 1 - 132174527 ---T i calJac3.chr10 C 0 I 1 s saiBol1.JH378136 10809736 1 + 21366645 ---T i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 9319397 1 + 13033340 ---T i cebCap1.NW_016107324v1 C 0 I 1 s aotNan1.NW_018501505v1 6401123 1 - 11604778 ---T i aotNan1.NW_018501505v1 C 0 I 1 s otoGar3.GL873530 36226638 1 - 36342412 ---T i otoGar3.GL873530 I 2 I 2 s canFam3.chr30 26827291 1 - 40214260 -T-- i canFam3.chr30 I 2 C 0 s dasNov3.JH579377 1085770 1 + 2868945 G--- i dasNov3.JH579377 C 0 C 0 e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=2099074.000000 s hg38.chr14_KI270725v1_random 170171 186 + 172810 TTTTTTTGCAAAATAGATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCACTCtgttgtaggccaataatgcctctgaaatgca-----tgtccatgtcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga s panTro5.chr1 126797351 186 + 228573443 TTTTTTGGCAAAATAGATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCTACTTtgtggtaggccaataatgcctctgaaaggca-----tgtccacgtcttaatccatg-gagcc--------tgaccttactt--gaagtagggcatttgcaga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408174 185 - 99763055 TTTTTTTGCAAAATAGATTACTACTCTTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCACTCtgtggtaggccaataatgccttctaaaggca-----tgtccgtgtcttaatccatg-gagcc--------tgaccttcttt--gaagtagggca-ttgctga i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53554501 186 + 121039945 TTTTTTTGCAAAATAGATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCACTCtgtggtaggccaataatgccttctaaaggca-----tgtctgtgtcttaatccatg-gagcc--------tgaccttcttt--gaagtagggcatttgcaga i nomLeu3.chr6 I 1 C 0 s rheMac8.chr7 146207389 186 - 169600520 TTTTTTTGCAAAATAAATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTGTATACCCACTCtgtggtatgtcaataatgtcttctacaggca-----tgtccatgtcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147884961 186 - 171882078 TTTTTTTGCAAAATAAATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTGTATACCCACTCtgtggtatgtcaataatgtcttctacaggca-----tgtccatgtcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957758 186 + 40200012 TTTTTTTGCAAAATAAATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTGTATACCCACTCtgtggtacgtcaataatgtcttctacaggca-----tgtccatatcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4403266 186 - 7633303 TTTTTTTGCAAAATAGATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCACTCtgtggtaggccaataatgtcttctacaggca-----tgcccatgtcttaatcgatg-gagcc--------tgaccttattt--gaagtagggtatttgcaga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200183 176 + 58131712 TTTTTTTGCAAAATAGATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTATTTTTCTTAATGTTTTGAG-ATTTATATACCCACTCCgtggtaggccaa----------tacaggca-----tgtccacgtcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2595506 186 - 2620224 TTTTTTTGCAAAATAAATTACTACTCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTGTATACCCACTCtgtggtaggtcaataatgtcttctacaggca-----tgcccatgtcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421060 186 - 10629787 TTTTTTTTCAAAATAGACTACTACCCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGGT-ATTTATATACCCACTCtgtggtaggccaataatgtcttctacaggca-----tgtccatgtcttaatccgtg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2360467 186 + 4596561 TTTTTTTGCAAAATAGATTACTACCCCTTCAT---------------------TTGTCTTCAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATGTCCACTCtgtggtaggccaataatgccttctataggca-----tgtccatgtcttaatccatg-gagcc--------tgaccttattt--gaagtagggcatttgcaga i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108002846 187 - 132174527 TTTTTTTGAGAAACTGATGACTACTCCATCAT---------------------TTATCTTAAAAGATACCCACTATTTGGATTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCACTCtgtggtaggccaataatatcttctaaaggca-----tgtccatgtcttaatccatg-gaacc--------tgatcttattt-aaaagtaggccatttgcaga i calJac3.chr10 I 1 C 0 s saiBol1.JH378136 10809738 187 + 21366645 TTTTTTTGAGAAACTGATGACTACTCCTTCAT---------------------TTATCTTAAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCGCTCtgtggtaggccaataatatcttctaaaggca-----tgtccatgtcttaattcatg-gaacc--------tgaccttattt-aaaagtagggtatttgcaga i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 9319399 208 + 13033340 TTTTTTTGAGAAACTGATGACTACTCCTTCATTTATCTTAAAAGATACCCACATTATCTTAAAAGATACCCACTATTTGGAGTTTACTTTTCTTAATGTTTTGAT-ATTTATATACCCACTCTCtgataggccaataatatcttctaaaggca-----cgcccatgtctttatccatg-gaacc--------tgaccttattt-aaaagtagggcatttgcaga i cebCap1.NW_016107324v1 I 1 C 0 s aotNan1.NW_018501505v1 6401125 182 - 11604778 TTTTTTTGAGAAACTGATGACTACTCCTTCAT---------------------TTATCTTAAAAGATACCCACTAT------TTTACTTTTCTTAATGTTTTGATAATTTATATACCCATTCtgtggtaggccaataatatcttctaaaggca-----tgcccatgtcttaatccatg-gaacc--------tgaccttattt-aaaagtagggcatttgcaga i aotNan1.NW_018501505v1 I 1 C 0 s otoGar3.GL873530 36226641 174 - 36342412 TTTTTTTATAAAATACATTACTACTTTTTCAT---------------------TTTCTTTCTAAGGTATTCAGTATTTGGAG-TTACTTTTTTTAATGTTTTAAA-ATGTGTATACACAGTCTGTGATAGCCCTTTAATGGCTCCCAAAGAGAGAGGctgtataaatgtta-------------------------cttattc--gagatagagtgtttgtggg i otoGar3.GL873530 I 2 C 0 s canFam3.chr30 26827292 180 - 40214260 ACTTTCTGCAAAATAGATCACCACCTCTTTCT---------------------TTGTTTTCAAAGATA-TCACTATATGGAATATACTTTTCTTA------TGAA-ATTTACATTTCCACTCtgtggtaagctgataatggtttccaaagata-----tggctacatc-taatccctgtaaatt--------ttactttattt-tgaaaaagagtatttgtaga i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1085771 193 + 2868945 TATTTTGGCATAATAGATCACCACTCTCCACT---------------------CT---TTCAAAGATCCTCACTGTTTGGAGTATAGTTTACTTGGTGTTTTGAA-ATTTATAAACCAACTCtgtgctaggctgataatggctcccaaagatg-----tgtccacttcctaatccctg-gaacttctgcatgttaccttatttgggaaaaaggatctttacaaa i dasNov3.JH579377 C 0 I 88 e ponAbe2.chrUn 5834909 764 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I a score=364764.000000 s hg38.chr14_KI270725v1_random 170357 50 + 172810 tgtat-----ttaagacatttgaggctggg----cacagtggctcatgtctgtaatccc s panTro5.chr1 126797537 50 + 228573443 tgtat-----ttaagacatttgaggctggg----cacagtggctcatgtctgtaatccc i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408359 50 - 99763055 tgtat-----ttaagaaatttgaggctggg----cgcagtggctcacgtgtgtaatcgc i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53554687 50 + 121039945 tgtat-----ttcagaaatttgaggccggg----cacagtggctcacgtctgtaatccc i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146207575 50 - 169600520 tgtat-----ttaaggaatttgaggccagg----cgcagtggctcatgtctgtaacccc i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885147 50 - 171882078 tgtat-----ttaaggaatttgaggccagg----cgcagtggctcatgtctgtaacccc i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957944 50 + 40200012 tgtat-----ttaaggaatttgaggccagg----cgcagtggctcatgtctgtaacccc i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4403452 44 - 7633303 tgtAC-----ATAAGAAATTTGGggccggg----cacagtggctca------taacccc i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200359 50 + 58131712 tgtat-----ttaagaaatttgaggccggg----cacagtggctcatgtctgtaacccc i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2595692 50 - 2620224 tgtat-----ttcaggaatttgaggccagg----tgtagtggctcatgtctgtaacccc i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421246 50 - 10629787 tgtat-----ttaagaaatttgaggctggg----tgcagtggctcacgtctgtaacccc i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2360653 50 + 4596561 tgtat-----ttaagAAATTTGAggctggg----cgcagtggctcacatctgtaacccc i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108003033 49 - 132174527 tgta------ttaagacatttgaacccggg----cgtggtgtctcacacctgtaatccc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809925 48 + 21366645 tgtat-----ttaagacatttgaacccggg----catg--gtttcacacctgtaatccc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9319607 44 + 13033340 tgtat-----ttaagac------accccgg----cgtggtgtctcacacctgtagtccc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401307 50 - 11604778 tgtat-----ttaaaacatttgaacccggg----cgtggtgtctcacacctgtaatcac i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36226815 59 - 36342412 tgtgtttaaattaagaaatttgagatgaagagatcatcctggattatgtgggtgagccc i otoGar3.GL873530 C 0 I 407 s canFam3.chr30 26827472 11 - 40214260 tgtaa-----ttaagg------------------------------------------- i canFam3.chr30 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1085964 88 + 2868945 I a score=1775736.000000 s hg38.chr14_KI270725v1_random 170407 216 + 172810 agcactttgaaaggccgaggcaggtggattcacctgaggtcaggagttcgagaccagcctggccaacatggtcaaaagcccgtatctaccaaaaatacaaaagttggctgggtgtggtggtggc-ggcgcctgtaatcccagctgctcgagagcctgaggcagggagaatcacttgaacat---aggaggcagaggttgcagtaagccaagatcgcgcca s panTro5.chr1 126797587 216 + 228573443 agcactttgaaaggccaaggcaggtggattcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaagcccatatctaccaaaaatacaaaagttagctgggtggggtggtggt-ggcacctgtaatcccagctacttgagatcctgaggcagggagaatcacttgaacac---aggaggtggaggttacagtaagccaagatcgtgcca i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408409 213 - 99763055 agaactttgagagaccgaggcaggtggattcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaaccccgtctctaccaaaaatacaaaagttagccaggc---atggtggt-ggcgcctgtaatcccagctactcgagaggctgaggcagggagaatcacttgaacac---aggaggtggaggttgcggtgagccaagatcgcacca i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53554737 213 + 121039945 agcactttgagaggccgaggcaggtggattcacctgaggtcaggagttcgagaccagcctggccaacatgatgaaaaccccgtctctaccaaaaatacaaaagttagccgggc---atggtggt-ggcgcctgtaatcccagctactcgagaggctgaggcggggagaatcacttgaactc---aggaggtggaggttgcagtgagccgagatcgcacca i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146207625 213 - 169600520 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcctggtcaacgtggtgcaaatgtcatctctacgaaaaatacaaaagttagatgggc---atggtggt-ggcgtctgtaatcccagctacttgagaggctgaggcagggagaaccacttggacac---aggaggtggaggctgcagtgagccaagatcatgcca i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885197 213 - 171882078 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcctggtcaacgtggtgcaaatgtcatctctacgaaaaatacaaaagttagatgggc---atggtggt-ggcgtctgtaatcccagctacttgagaggctgaggcagggagaaccacttggacac---aggaggtggaggctgcagtgagccaagatcatgcca i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26957994 213 + 40200012 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcctggtcaacgtggtgcaaatgtcatctctacgaaaaatacaaaagttagatgggc---atggtggt-ggcgtctgtaatcccagctacttgagaggctgaggcagggagaaccacttggacac---aggaggtggaggctgcagtgagccaagatcatgcca i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4403496 213 - 7633303 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcctggtcaacgtggtgaaaatgtcatctctaccaaaaatacaaaagttaaacgggc---atggtggt-ggcgcctgtaatcccagctacttcagaggctgagtcagggagaaccacttggacac---agaaggtggaggctgcagtgagccaagatcatgcca i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200409 213 + 58131712 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcctggtcaatgtggtgaaaatgtcatctctaccaaaaatacaaaagttagatgggc---atggtggt-ggcgcctgtaatcccagctacttgagaggctgaggcagggagaaccacttggacac---aggaggtggaggctgcagtgagccaagatcatgcca i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2595742 213 - 2620224 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagtctggtcaacgtggtgaaaatgtcatctctaccaaaaatacaaaagttagatgggc---acggtggt-ggcttctgtaattccagctacttgagaggctgaggcagggagaaccacttggacac---aggaggtggaggctgcagtgagccaagatcatgcca i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421296 213 - 10629787 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcctggtcaacatggtgaaaatgtcatctctaccaaaagtacaaaagttagacgagc---atggtggt-ggcgcctgtaatcccagctacttgagaggctgagacagggagaaccacttggacac---aggagatggaggctgcagtgagccaagatcgagcca i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2360703 213 + 4596561 agcactttgagaggcagaggcaggtggatccacctgaggtcaggagttcaagaccagcccggtcaacatggtgaaaatgtcatctctaccaaaagaacaaaagttagacgggc---atggtggt-ggcacttgtaatcccagctacttgagaggctgagacagggagaaccacttggacac---agcaggtggaggctgcagtgagccaagattgagcca i rhiBie1.NW_016805531v1 C 0 C 0 s calJac3.chr10 108003082 214 - 132174527 agcactttgggaggccgaggcaggtggat-cacctgaggtcaggagttcgagaccagcctggtcaacatggtg-aaaccctgtctctacccaagatacaaaaattagctggga---gtggtggcaggtgcctgtaatccaagctactcaagaggtggaggca-ggagaatcagttaaacctgggaggaggtggaggttgcagtgggccaaaatcaaggca i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10809973 214 + 21366645 agcactttgggagactgaggcgggtggat-catctgaggtcaggagttcgagaccagcctggtcaacatggta-aaaccctgtctctatccaacatacaaaaattagctgggc---atggtggcggaagcctgtaatccaagctactaaggaggtggaggca-gaagaatcagttaaacctgggaggaggtggaggttgcagtgagccaagatcaagcca i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9319651 214 + 13033340 agcgctttgggaggccgaggcggatggat-cacctgatgtcaggagtttgagaccagcatggtcaacatggtg-aaaccctgtctctacccaagatacaaaaattagctgggc---gtggtggcgggtgcctgtattccaagctactgaggaggtggaggca-ggagaatcagttaaacctgggaggaggtggaggttgcagtgagccaagatcaagcca i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401357 214 - 11604778 agcactttcggaggccgaggtgggaggat-cacctgaggtcaggagttcgagaccagcctggtcaacatggtg-aaaccctgtctctacccaagatacaaaaattagctgggc---atggtggcgggcacctgtaatccaagctactcaggaggtggaggca-ggagaatcagttaaacctgggaggaggtggaggttgcagtgagccaagatcaagcca i aotNan1.NW_018501505v1 C 0 C 0 s canFam3.chr30 26827483 91 - 40214260 ---attttgaaa--------tgagaggat-tatcttgggt---------------------------------------------------------------ttatctggct---a----ggc-actacatgtcattaca------------------------agtgtctttataaaag---agaaggcagaag--gaagt----------------- i canFam3.chr30 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1085964 88 + 2868945 I e otoGar3.GL873530 36226874 407 - 36342412 I a score=361034.000000 s hg38.chr14_KI270725v1_random 170623 42 + 172810 ctgcactccagcctgggtggcagagcaagactctgtct-caaa s panTro5.chr1 126797803 39 + 228573443 ttgtactccagcctgggtggcagagcaagactctgtat-c--- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408622 40 - 99763055 ttgcactccagcctgggtgacagagcaaggctctgtctac--- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53554950 37 + 121039945 ttgcactgtagcctgggtgacagagcaaga--ctgtct-c--- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146207838 39 - 169600520 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147885410 39 - 171882078 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 26958207 39 + 40200012 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 4403709 39 - 7633303 ctgcactccagcctgggtaacagagcaaggctctgtct-c--- i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 36200622 39 + 58131712 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 2595955 39 - 2620224 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421509 39 - 10629787 ttgcactccagcctgggtgacagagcaagactcggtct-c--- i colAng1.NW_012121598v1 C 0 I 3 s rhiBie1.NW_016805531v1 2360916 39 + 4596561 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i rhiBie1.NW_016805531v1 C 0 T 9534 s calJac3.chr10 108003296 39 - 132174527 ttgcaccccagcctaggtgacagagcaagactctgtct-c--- i calJac3.chr10 C 0 I 3 s saiBol1.JH378136 10810187 39 + 21366645 ttgcactccagcctggatgacagagcaagagtctgtct-g--- i saiBol1.JH378136 C 0 I 3 s cebCap1.NW_016107324v1 9319865 39 + 13033340 ttgcactccagcctgggtgacagaacaagagtctgtct-c--- i cebCap1.NW_016107324v1 C 0 I 3 s aotNan1.NW_018501505v1 6401571 39 - 11604778 ttgcactccagcctgggtgacagagcaagactctgtct-c--- i aotNan1.NW_018501505v1 C 0 I 3 s otoGar3.GL873530 36227281 39 - 36342412 CTACACATTCATACGAATGGTAAAACTTAACTATAGTC-C--- i otoGar3.GL873530 I 407 I 3 s canFam3.chr30 26827574 9 - 40214260 ----------------gtgacaatg------------------ i canFam3.chr30 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1085964 88 + 2868945 I a score=-31866.000000 s hg38.chr14_KI270725v1_random 170665 14 + 172810 caaacaaaaaa---------aaa s panTro5.chr1 126797842 2 + 228573443 ---------------------aa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408662 2 - 99763055 ---------------------aa i panPan2.chr15 C 0 C 0 s rheMac8.chr7 146207878 6 - 169600520 --------aaa---------aaa i rheMac8.chr7 I 1 I 3 s macFas5.chr7 147885450 6 - 171882078 --------aaa---------aaa i macFas5.chr7 I 1 I 3 s macNem1.NW_012010577v1 26958247 6 + 40200012 --------aaa---------aaa i macNem1.NW_012010577v1 I 1 I 3 s cerAty1.NW_012000887v1 4403749 6 - 7633303 --------aaa---------aaa i cerAty1.NW_012000887v1 I 1 I 6602 s chlSab2.chr26 36200662 6 + 58131712 --------aaa---------aaa i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 2595994 5 - 2620224 ---------aa---------aaa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421551 7 - 10629787 -------aaaa---------aaa i colAng1.NW_012121598v1 I 3 I 7 s calJac3.chr10 108003338 3 - 132174527 --------------------aaa i calJac3.chr10 I 3 I 1 s saiBol1.JH378136 10810229 13 + 21366645 ----------ataagtaaataaa i saiBol1.JH378136 I 3 I 1 s cebCap1.NW_016107324v1 9319907 3 + 13033340 --------------------aaa i cebCap1.NW_016107324v1 I 3 I 1 s aotNan1.NW_018501505v1 6401613 1 - 11604778 --------------------a-- i aotNan1.NW_018501505v1 I 3 C 0 s otoGar3.GL873530 36227323 13 - 36342412 -AAGTAggagg---------aaa i otoGar3.GL873530 I 3 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140805376 13131 - 162156779 I e dasNov3.JH579377 1085964 88 + 2868945 I e canFam3.chr30 26827583 0 - 40214260 C e nomLeu3.chr6 53554987 0 + 121039945 C a score=6011.000000 s hg38.chr14_KI270725v1_random 170679 1 + 172810 a s panTro5.chr1 126797844 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408664 1 - 99763055 a i panPan2.chr15 C 0 C 0 s rheMac8.chr7 146207887 1 - 169600520 a i rheMac8.chr7 I 3 C 0 s macFas5.chr7 147885459 1 - 171882078 a i macFas5.chr7 I 3 C 0 s macNem1.NW_012010577v1 26958256 1 + 40200012 a i macNem1.NW_012010577v1 I 3 C 0 s cerAty1.NW_012000887v1 4410357 1 - 7633303 a i cerAty1.NW_012000887v1 I 6602 C 0 s papAnu3.chr7 140818507 1 - 162156779 a i papAnu3.chr7 I 13131 I 1503 s chlSab2.chr26 36200668 1 + 58131712 a i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2595999 1 - 2620224 a i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421565 1 - 10629787 a i colAng1.NW_012121598v1 I 7 I 5 s calJac3.chr10 108003342 1 - 132174527 a i calJac3.chr10 I 1 C 0 s saiBol1.JH378136 10810243 1 + 21366645 a i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 9319911 1 + 13033340 a i cebCap1.NW_016107324v1 I 1 C 0 s aotNan1.NW_018501505v1 6401614 1 - 11604778 a i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36227336 1 - 36342412 g i otoGar3.GL873530 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e dasNov3.JH579377 1085964 88 + 2868945 I e canFam3.chr30 26827583 0 - 40214260 C e nomLeu3.chr6 53554987 0 + 121039945 C a score=106954.000000 s hg38.chr14_KI270725v1_random 170680 21 + 172810 aaaaaaaaaaaaagaag--------aaga-- s panTro5.chr1 126797845 21 + 228573443 aaaaaaaaaaaaagaag--------aaga-- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408665 21 - 99763055 aaaaaaaaaaaaaaaaa--------aaga-- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53554987 18 + 121039945 ---aaaaaaaaaaaaag--------aaga-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146207888 21 - 169600520 aaaaaaaaaaaaaaaag--------aaga-- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885460 21 - 171882078 aaaaaaaaaaaaaaaag--------aaga-- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958257 29 + 40200012 aaaaaaaaaagaagaaGaagaaagaaaga-- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410358 21 - 7633303 aaaaaaaaaaGAAGAAG--------AAGA-- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200669 21 + 58131712 aaaaaaagaagaagaag--------aaga-- i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596000 19 - 2620224 agaagaagaagaaga----------aaga-- i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421571 23 - 10629787 aaaaaaaaaagaagaag--------aagaag i colAng1.NW_012121598v1 I 5 C 0 s calJac3.chr10 108003343 18 - 132174527 ---ataataataataag--------atga-- i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10810244 18 + 21366645 ---aataaataaataag--------atga-- i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9319912 18 + 13033340 ---aataaataaataag--------atga-- i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401615 18 - 11604778 ---aaaaaaaaaaaaag--------atga-- i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36227337 18 - 36342412 ---aggagggagaggag--------aggg-- i otoGar3.GL873530 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e dasNov3.JH579377 1085964 88 + 2868945 I e canFam3.chr30 26827583 0 - 40214260 C a score=597272.000000 s hg38.chr14_KI270725v1_random 170701 120 + 172810 aagaaa-aaagaaatttgagaggagaacatcctgggttatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaaggagacaaaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggacaatagagac s panTro5.chr1 126797866 117 + 228573443 aagaaa-aaagaaatttga---gagatcatcctgagttatccgagtgagcccta------------aa---tgccat-----------------------------cacaagtttcct--tgtaaaaaggagacagaggga------------------------------------------------------------------------------gcagaaggcaata-----------------ggacaacagaaat i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408686 118 - 99763055 aagaaagaaagaaacttga---gagatcatcctgcattatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcgt--tgtaaaaaggagacagaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggacgatggaaat i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555005 117 + 121039945 aag----aaagaaatttgagaagagatcattctgcattgtctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaaggagacagaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggacgacggaaac i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146207909 121 - 169600520 aagaaagaaagaaatttgagaggagaccatcctggattatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaagcagacagaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggatgatggaaat i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885481 121 - 171882078 aagaaagaaagaaatttgagaggagaccatcctggattatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaagcagacagaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggatgatggaaat i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958286 121 + 40200012 aagaaagaaagaaatttgagaggagaccatcctggattatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaagcagacagaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggatgatggaaat i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410379 120 - 7633303 AA-AAAGAaagaaatttgagacgagaccatcctgggttatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaagcagacagaggaa------------------------------------------------------------------------------gcagaaagcaatg-----------------ggacgatggaaat i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200690 121 + 58131712 aagaaagaaagaaatttgagaggagaccatcctgggttatctgagtaagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaagcagacagacgga------------------------------------------------------------------------------gcagaaggtaatg-----------------ggacaatggaaac i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596019 121 - 2620224 aagaaagaaagaaatttgagaggagaccatcctgggttatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaagcagacagaggga------------------------------------------------------------------------------gcagaaggcaatg-----------------ggacgatggaaat i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421594 112 - 10629787 aagaaagaaagaaatttgagaggaga---------gttatctgagtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtaaaaaggagacagaggga------------------------------------------------------------------------------gcagaaggtaatg-----------------ggatgatggaaat i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 108003361 121 - 132174527 ---------------------ggagctcatcctgggttatcctggtaagcccta------------aa---tgccat-----------------------------cgcaagtgtcct--tgtgaaaaggagacagagaga--gatttgacat--------------------------------------acacactga-----------------aggcagaaggcaatg-----------------ggacgacagaagc i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10810262 119 + 21366645 ---------------------ggagctcatcctgggttatcctggtgagcccta------------aa---tgccat-----------------------------cacaagtgtctt--tgtgaaaagaagac--agaaa--gatttgacat--------------------------------------acacactga-----------------aagcagaaggcaatg-----------------ggatgacagaagc i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9319930 121 + 13033340 ---------------------ggagctcatcctgggttatcctgatgagcctta------------aa---tgccat-----------------------------cataagtgtcct--tgtgaaaaggagactgagaga--gatttgacat--------------------------------------acacactga-----------------aagcaggaggcaatg-----------------ggacaacagaagc i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401633 121 - 11604778 ---------------------ggcgctcatcctgggttatcctggtgagcccta------------aa---tgccat-----------------------------cacaagtgtcct--tgtgaaaaggagacagagaga--gatttgacat--------------------------------------acacactga-----------------aggcagaaggcaatg-----------------ggatgacagaagc i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36227355 253 - 36342412 gaggggggagggaggcttggaggagg------tagggTATTTGGGAGGAACTCACCTAATGTGCataa---tgcaatggtacatttcaaaactattaagaaaagagtataattgtcttaccacaaaaaagaagcaaggtgatggatgtgttatcacttcaatgtaagcatttcacactgtatatcaaatcagtacactgaaccccagaaatgcatccatgtacacagttatgatttaataaaaaaataaaaataataaaaat i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827583 74 - 40214260 --gaagcagatagatttga-----------------------ggatgag----a------------aagtttgcggt----------------------------------------t--tgggaaatggagaaagag---------------------------------------------------------------------------------gccataagccaag-----------------gaatac------- i canFam3.chr30 C 0 I 11 s dasNov3.JH579377 1086052 45 + 2868945 ----------------------------------------------------------------------------------------------------------------------------------aggcaaaggga--gatttgac--------------------------------------------------------------------acacgtgacaatg-----------------caagtagaaagac i dasNov3.JH579377 I 88 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=548816.000000 s hg38.chr14_KI270725v1_random 170821 57 + 172810 ggagaa-gtttgaagatgctgtgatgctggctttgaaaa-tagaggaa-ggcccacagga s panTro5.chr1 126797983 57 + 228573443 ggagaa-gtttgaagatgctgtgatgctggctttgaaaa-tagaggaa-ggcccacagga i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408804 57 - 99763055 ggagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555122 57 + 121039945 ggagaa-gtttgaagatgctgtgacgcaggctttgaaaa-tggaggaa-ggcccacagga i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208030 57 - 169600520 ggagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885602 57 - 171882078 ggagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958407 57 + 40200012 ggagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410499 57 - 7633303 gaagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200811 57 + 58131712 ggagat-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596140 57 - 2620224 ggagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcccacagga i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421706 57 - 10629787 ggagaa-gtttgaagatgctgtgatgcaggctttgaaaa-tggaggaa-ggcacacagga i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 108003482 58 - 132174527 agagaa-gtttgaagatgctgagatgctggctttaaaaa-cggaggaaggggccacagga i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10810381 58 + 21366645 agagaa-gtttaaagaggctgagatgctggctttgaaaa-cggaggaagggaccacagga i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9320051 58 + 13033340 agagaa-gtttgaagacgctgagatgctggctttgaaaa-tggaggaagggaccacagga i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401754 58 - 11604778 agagaa-gtttgaagatgctgagatgctggctttgaaaa-tggaggaagggaccacagga i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36227608 57 - 36342412 aaaaaaCACTGGAAGATGCTAtgctgacagctttggaaa-tggaggaa-ggcat-catga i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1086097 57 + 2868945 --agag-atttgaagatgacatgcagctggctttaaagactggaggaatgggccaagaaa i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e canFam3.chr30 26827657 11 - 40214260 I a score=848496.000000 s hg38.chr14_KI270725v1_random 170878 89 + 172810 ---------------tggaagaagc------------catg-aatgaattatcttttggagtctccattgagaatatagcccttctgccatcttgactttaggtcagtgaaacgaaa s panTro5.chr1 126798040 88 + 228573443 ---------------tggaagaggc------------catg-aatggattattttttggagtctccattgagaatgtagctcttctgccatcttgactttaggtcagtgaaacg-aa i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408861 88 - 99763055 ---------------tggaagaggc------------catg-aacagattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttaggtcagtgaaacg-aa i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555179 88 + 121039945 ---------------tggaaaagac------------catg-aacggattatctttcggagtctccagtgagaacacagcccttctgccaccttgactttaggtcagtgaaacg-aa i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208087 88 - 169600520 ---------------tggaagaggc------------catg-aacggattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttaagtcagtgacaca-aa i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885659 88 - 171882078 ---------------tggaagaggc------------catg-aacggattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttaagtcagtgaaaca-aa i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958464 88 + 40200012 ---------------tggaagaggc------------catg-aacggattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttaagtcagtgaaaca-aa i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410556 88 - 7633303 ---------------tccaagaggc------------catg-aacggattatcttttggagtctccagtgagaatatagtccttctgccaccttgactttaggtcagtgaaaca-aa i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200868 87 + 58131712 ---------------tggaagaggc------------catg--acggattatcttttggagtctccagtgagaaaacagtccttctgccaccttgactttacgccagtgaaaca-aa i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596197 88 - 2620224 ---------------tggaagaggc------------catg-aacggattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttaggtcagtgaaaca-aa i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421763 88 - 10629787 ---------------tggaagaggc------------catg-aacggattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttaggtcagtgaaaca-aa i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 108003540 88 - 132174527 ---------------tggaagcagc------------cata-aacagattatcttttggagtctccagtgagaatacagcccttctgccactttgactttagggcagtgaaatg-aa i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10810439 88 + 21366645 ---------------tggaagagac------------cata-aacagattatcttttggagtctccagtgagaatatagcccttctgccaccttgactttagggcggtgaaatg-aa i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9320109 88 + 13033340 ---------------tggaagaggc------------cata-aacagattatcttttggagtctccagtgagaatatagcccttctgccaccttgactttagggcagtgaaatg-aa i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401812 88 - 11604778 ---------------tggaaaaggc------------cata-aacagattatcttttggagtctccagtgagaatacagcccttctgccaccttgactttagggcagtgaagtg-aa i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36227665 101 - 36342412 ---------------tttgagaaacgtagcttcagaagatgaaacagattatctgttagagcctccagtgagaaagaagtcctggtgccaccttgcctttaggtcagcaaaaca-gg i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827668 79 - 40214260 ---------------tagaagagtc------------aatt-aacagattatctttaagaatctccagagggagtgctgctcag---------tgaaactgggctagggaaact-ga i canFam3.chr30 I 11 C 0 s dasNov3.JH579377 1086154 91 + 2868945 tgtagctccagaacccagaatagcc------------aagg-aagagactttcccctggaaagtccaaa------------ctggcagcacttggattttttcccagtgaaact-aa i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5834909 764 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=43830.000000 s hg38.chr14_KI270725v1_random 170967 3 + 172810 tgt s panTro5.chr1 126798128 3 + 228573443 tgt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408949 3 - 99763055 tgt i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5835673 3 + 72422247 tgt i ponAbe2.chrUn I 764 I 953 s nomLeu3.chr6 53555267 3 + 121039945 tgt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208175 3 - 169600520 tgt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147885747 3 - 171882078 tgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958552 3 + 40200012 tgt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410644 3 - 7633303 tgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36200955 3 + 58131712 tgt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596285 3 - 2620224 tgt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8421851 3 - 10629787 tgt i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 108003628 3 - 132174527 tgt i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10810527 3 + 21366645 tgt i saiBol1.JH378136 C 0 C 0 s cebCap1.NW_016107324v1 9320197 3 + 13033340 tgt i cebCap1.NW_016107324v1 C 0 C 0 s aotNan1.NW_018501505v1 6401900 3 - 11604778 tgt i aotNan1.NW_018501505v1 C 0 C 0 s otoGar3.GL873530 36227766 3 - 36342412 tgt i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827747 3 - 40214260 cgt i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1086245 3 + 2868945 tgc i dasNov3.JH579377 C 0 C 0 e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=2245743.000000 s hg38.chr14_KI270725v1_random 170970 235 + 172810 tgtacttctgttctctctaactgagagagaataaatttaccttgtttaaaatcactaagtttgtgataagttgttacaa-----cagccccaggaaacaagtacaCACTCATTTATTTTcttttattgcttaacattatgcattgtgagactgacctatgttgttacatgtagttctaacttgttcattttcattgctgaataatagtcaatAGGCAATTTTAAAAATTCATCT--------TTTTTT s panTro5.chr1 126798131 235 + 228573443 tgtacttctggtctctctaactgagagagaataaatttatcttgtttaaaatcactaagtttgtgataagttgttacaa-----cagccccaggaaacaaatacaCACTCATTTAtcttcttttattgcttaacattatgcattgtgagattgacctatgttgttacatgtagttctaatttgttcattttcattgctgaataatattcaatATGCAATTTTAAAAAATCATCT--------TTTTTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55408952 233 - 99763055 tgtagttctggtctctttaactgagagagaataaatttctcttgttttaaatcgctaagtctgtggtaagttgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgacatatgttgttacatgtagttctaatttgttcattttcattgctgaatagcattc-ATAGGCACTTTTTAAAATTCATCC--------TTTTTT i panPan2.chr15 C 0 I 3 s nomLeu3.chr6 53555270 232 + 121039945 tgcacttctggtctctttaactgagagagaataaatttctcttgttttaaatcactaagtttgtggtaagtcattacaa-----cagccccaggaaacaaatacGCACTC--TTATtttcttttattgcttaacattatgca-tgtgagattgacatatgttgttacatgtagttctaatttgttcattttcattgctgaatagtattcaatAGGCAATTTTTAAAATTCATCC--------tttttt i nomLeu3.chr6 C 0 I 3 s rheMac8.chr7 146208178 232 - 169600520 tgtacttctggtttcttcaactgagagagaataaatt--tcttgttttaaatcactaagtttgtgagaagctgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgaggtatgttgctatgtatagttctaatttgttcattctcattgctgaatagtattcaatATGTAATTTTTAAAATTCATCC--------TTTTTT i rheMac8.chr7 C 0 I 8 s macFas5.chr7 147885750 232 - 171882078 tgtacttctggtttcttcaactgagagagaataaatt--tcttgttttaaatcactaagtttgtgagaagctgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgacgtatgttgctatgtatagttctaatttgttcattctcattgctgaatagtattcaatATGTAATTTTTAAAATTCATCC--------TTTTTT i macFas5.chr7 C 0 I 8 s macNem1.NW_012010577v1 26958555 234 + 40200012 tgtatttctggtttcttcaactgagagagaataaatt--tcttgttttaaatcactaagtttgtgagaagctgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgacgtatgttgctatgtatagttctaatttgttcattctcattgctgaatagtattcaatATGTAATTTTTAAAATTCATCCT------TTTTTTT i macNem1.NW_012010577v1 C 0 I 8 s cerAty1.NW_012000887v1 4410647 234 - 7633303 tgtacttctggtttctttaactgagagagaataaatttctcttgttttaaatcactaagtttgtgagaagctgttacaa-----ctgccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgaaattgatgtatgttgctacatgtagttctaatttgttcattttcattgctgaatagtattcaatATGCAATTTTTAAAATTCATCC--------TTTTTT i cerAty1.NW_012000887v1 C 0 I 8 s chlSab2.chr26 36200958 234 + 58131712 tgtacttctggtttctttaactgagagagaataaatttatcttgttttaaatcactaagtttgtaagaagctgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgatgtatgttgctacgtgtagttctaatttgttcattttcattgctgaatagtattcaatATACAATTTTTAAAATTCATCC--------TTTTTT i chlSab2.chr26 C 0 I 4 s manLeu1.NW_012108674v1 2596288 234 - 2620224 tgtacttctggtttctttaactgagagagaataaatttctcttgttttaaatcactaagtttgtgagaagctgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgatgtatgttgctatgtgtagttctaatttgttcattttcattgctgaatagtattcaatATGTAATTTTTAAAATTCATCC--------TTTTTT i manLeu1.NW_012108674v1 C 0 I 335 s colAng1.NW_012121598v1 8421854 234 - 10629787 tgtacttctggtttctttaactgagagagaataaatttctcttgttttaaatcactaagtttgtgagaagctgttacaa-----cagccccaggaaacaaatacaCactcttttattttcttttattgcttaacattatgca-tgtgagattgacatatgttgttacatgtagttctaatttgttcattttcattgctgaatagtattcaatATGCAATTTTTAAAATTCATCC--------TTTTTT i colAng1.NW_012121598v1 C 0 I 2 s calJac3.chr10 108003631 237 - 132174527 tttacttctggcctccttaactgagagagaataaatttctgttgttttaaataactacgtttgtgataatttgttagacaaacttagcCCCAAGAAACAAATATGCACGCTTTAATTTTAtttt-ttgcttaacattatgca-tgtgagattgacctgtgttgctacatgtagttctaatttgttcatttttattgctgaaaagcattcaatatgtaATTTT-AAAAGTAATCC--------TACTTT i calJac3.chr10 C 0 I 1 s saiBol1.JH378136 10810530 238 + 21366645 tgtacttctggcctccttaactgagagagaatacatttctgttgttttaaatcactaagtatgtgataacttgttacacaaacttagccccaagaaacaaatacaCactcttttattttatttt-ttgcttaacattatgca-tgtgagattgacctgtattgttacatgtagttctaatttgttcattttcaaagctgaatagtattcaatATGTAATTTTAAAAAGTCATCC--------TACTTT i saiBol1.JH378136 C 0 I 1 s cebCap1.NW_016107324v1 9320200 232 + 13033340 tgtgtgtctgg---ccttaactgagagagaatacatttctgttgttttaaatcactaagttagtgataatttgttacacaaacttagcCCCAAGCAACAAATACACA--CTTTTATTTTAtttt-ttgcttaacattatgca-tgtgagattgacctgtgttgttacatgttgttctaatttgttca-tttcattgctgaagagtattcaatgtgtaaTTTTAAAAAGTCATCC--------TACTTT i cebCap1.NW_016107324v1 C 0 I 1 s aotNan1.NW_018501505v1 6401903 238 - 11604778 tgtacttctggcctccttaactgagagagaataaatttctgttgctttaaatcactaagtttgtaataatttgctacacaaacttagccccaagaaacaaatacCCactcttttattttatttt-ttgcttaacattatgca-tgtgagattgacctgtgttgttacatgtagttctaatttgttcattttcattgctgaatagtattcaatatgtaATTTTTAAAAGTCATCC--------TACTTT i aotNan1.NW_018501505v1 C 0 I 1 s otoGar3.GL873530 36227769 217 - 36342412 ccaacttttgttcccttgtattgggagagaataaatttctgttgtcttaagtcactaagtttgtggcaattcattacaa-----cagccccagaaaactaatacaCACCCTTTCTtcttctttctttgcacagcattgtgca-tgcgagacagatccacgttgttacatgtacttctaatttgttcattttcgttgctaaataTTTCTTCCTACGTATTTTGA------------------------- i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827750 207 - 40214260 tggacttctagcttcttgaactatgagagaaaagatttctgttgtttcaagtcact------gtggtaatttgttagaa-----tagccacaggaaactaatgcaTATTGTtt------------ttgtttaacattatgca-tgtgagattgatcaatgttggtacatgtagttctaatttattaattttcattgctgtgtagtGGTT---------TTCTATTCATTCATTC--------TTTCTT i canFam3.chr30 C 0 I 1 s dasNov3.JH579377 1086248 240 + 2868945 tgaatttctgacctctgaaactgaacaagaataagtttctgttgttttcatataccaagtttgtagtaattatttgtaa-----tggccacaggaaactaGtgtacactctcatgtttcctattttccctcagttttatgca-ggtgaggttgaaccatgttgctg-acatagttctactttgtccatttgctttgctgtatagtatactatATGCAAATTT-AAAATTCATTCTTCCTGGTTTTTTT i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=245789.000000 s hg38.chr14_KI270725v1_random 171205 30 + 172810 AAaca--aataatgctgctatgaacatccttg s panTro5.chr1 126798366 30 + 228573443 GAaca--aataatgctgctatgaacatccttg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409188 30 - 99763055 AAACA--AATGCTGCTGCTATGAACATCCTTG i panPan2.chr15 I 3 C 0 s nomLeu3.chr6 53555505 30 + 121039945 aaaca--gataatgctgctatgaacatccttg i nomLeu3.chr6 I 3 C 0 s rheMac8.chr7 146208418 30 - 169600520 AAACA--AATAATGCTGCTATGAACATCCTAG i rheMac8.chr7 I 8 C 0 s macFas5.chr7 147885990 30 - 171882078 AAACA--AATAATGCTGCTATGAACATCCTAG i macFas5.chr7 I 8 C 0 s macNem1.NW_012010577v1 26958797 30 + 40200012 AAACA--AATAATGCTGCTATGAACATCCTAG i macNem1.NW_012010577v1 I 8 C 0 s cerAty1.NW_012000887v1 4410889 30 - 7633303 AAaca--aataatgctgctatgaacatccttg i cerAty1.NW_012000887v1 I 8 C 0 s chlSab2.chr26 36201196 30 + 58131712 AAaca--aataatgctgctatgaacatccttg i chlSab2.chr26 I 4 C 0 s colAng1.NW_012121598v1 8422090 30 - 10629787 AAACA--AAGAATGCTGTCATCAACATCCTTG i colAng1.NW_012121598v1 I 2 C 0 s calJac3.chr10 108003869 30 - 132174527 AAaca--aataatgctgctatgaacatccttg i calJac3.chr10 I 1 C 0 s saiBol1.JH378136 10810769 30 + 21366645 AAaca--aataatgctgctgtgaacatccttg i saiBol1.JH378136 I 1 C 0 s cebCap1.NW_016107324v1 9320433 30 + 13033340 AAAGA--AATAATGCCACTATGAACATCCTTG i cebCap1.NW_016107324v1 I 1 N 0 s aotNan1.NW_018501505v1 6402142 30 - 11604778 AAaca--aataatgctgctatgaacattcttg i aotNan1.NW_018501505v1 I 1 C 0 s otoGar3.GL873530 36227986 16 - 36342412 ----------------GTTATCACCATTCTTG i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827958 24 - 40214260 TTACA--AATAATGTTGCTATGAACA------ i canFam3.chr30 I 1 C 0 s dasNov3.JH579377 1086488 31 + 2868945 GAACATTGATAATACTGATATGAACATTTTG- i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e manLeu1.NW_012108674v1 2596522 335 - 2620224 I a score=5757.000000 s hg38.chr14_KI270725v1_random 171235 1 + 172810 t s panTro5.chr1 126798396 1 + 228573443 c i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409218 1 - 99763055 C i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555535 1 + 121039945 c i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208448 1 - 169600520 C i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147886020 1 - 171882078 C i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958827 1 + 40200012 C i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410919 1 - 7633303 c i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201226 1 + 58131712 c i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8422120 1 - 10629787 C i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 108003899 1 - 132174527 t i calJac3.chr10 C 0 C 0 s saiBol1.JH378136 10810799 1 + 21366645 c i saiBol1.JH378136 C 0 C 0 s aotNan1.NW_018501505v1 6402172 1 - 11604778 t i aotNan1.NW_018501505v1 C 0 N 0 s otoGar3.GL873530 36228002 1 - 36342412 C i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1086519 1 + 2868945 C i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e canFam3.chr30 26827982 0 - 40214260 C e manLeu1.NW_012108674v1 2596522 335 - 2620224 I a score=44238.000000 s hg38.chr14_KI270725v1_random 171236 8 + 172810 ttgtatct s panTro5.chr1 126798397 8 + 228573443 ttgtatct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409219 8 - 99763055 TTGTAACT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555536 8 + 121039945 ttgtatct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208449 8 - 169600520 TTCTATCT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147886021 8 - 171882078 TTCTATCT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958828 8 + 40200012 TTCTATCT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410920 8 - 7633303 ttctatct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201227 8 + 58131712 ttctatct i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8422121 8 - 10629787 TTGTATCT i colAng1.NW_012121598v1 C 0 C 0 s calJac3.chr10 108003900 8 - 132174527 atatatct i calJac3.chr10 C 0 N 0 s saiBol1.JH378136 10810800 8 + 21366645 atatatct i saiBol1.JH378136 C 0 N 0 s otoGar3.GL873530 36228003 8 - 36342412 ATATATCT i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827982 5 - 40214260 ---TGTCT i canFam3.chr30 C 0 C 0 s dasNov3.JH579377 1086520 8 + 2868945 ACATGTCT i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e manLeu1.NW_012108674v1 2596522 335 - 2620224 I a score=1281685.000000 s hg38.chr14_KI270725v1_random 171244 249 + 172810 tgtggtataaatatgtaagtgggtagctgcatccatttactttt-tctccaaca-gtctatgagaatttcccttgttctctatcttcatttgtaatcggtattgttagtc-ttttaatgttagacaaactagtatgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gCCATT----TTTATcaggactg------agcctagggtgaagcaagagaggcatctagggtatacaattta s panTro5.chr1 126798405 248 + 228573443 tgtggtataaatatgtaagtgggtagctgcatccatttactttt-tctccaaca-gtctaggagaagttcccttgttctgtatcttcatttgtaatcattattgttagtc--tttaatgttagacaaactagtatgtgtagaatggc-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gCCATT----TTCATcaggattg------agcctagggtgaagcaagagaggcatctaaggtacacaattta i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409227 249 - 99763055 TGTGGTATAAGTATGTAAGTGGgtagctgcatccatttactttt-tctccagca-gtctatgagaatttcccttgttctgtgtcttcatttgtaattgttattgttagtc-ttttaatgttagacaaactagtgtgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gCTGTT----TTCATcaggactg------agactagcgtgaagcaagagaggcatctagggtacacagttta i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555544 244 + 121039945 tgtggtataaatatgtaagtgggtagctgcatccatttactttt-tctccagca-gtctatgagaatttcccttgttctgtatcttcatttgtaattgttattgttagtc-ttttaatgttagacaaactagtatgtgtagaatggt-----atgtcattaaagttttaattt-aaatttctctaacaaataatga----------------------gCTGTT----TTCATCAGAACTG------AGACTAGCGTGAAGCAAGAGAGGCATCTAGGGTACACA----- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208457 249 - 169600520 TGTGGTATAAATACGTAAGTGGgtagctgcacccatttactttt-tctcaagca-gtctatgagaatttcccttgttctgtatcttcatttgtaattgttattgttagtg-ttttaacgttagacaaactagtacgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gTCGTT----TTCATcaggactg------agaccagtgtgaagcaagagaggcatctagggtacacaattta i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147886029 249 - 171882078 TGTGGTATAAATACGTAAGTGGgtagctgcacccatttactttt-tctcaagca-gtctatgagaatttcccttgttctgtatcttcatttgtaattgttattgttagtg-ttttaacgttagacaaactagtacgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gTCGTT----TTCATcaggactg------agaccagtgtgaagcaagagaggcatctagggtacacaattta i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26958836 249 + 40200012 TGTGGTATAAATACATAAGTGGgtagctgcacccatttactttt-tctcaagca-gtctatgagaatttcccttgttctgtatcttcatttgtaattgttattgttagtg-ttttaacgttagacaaactagtacgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gTCGTT----TTCATcaggactg------agaccagtgtgaagcaagagaggcatctagggtacacaattta i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4410928 249 - 7633303 tgtggtataaatatgtaagtgggtagctgcacccatttactttt-tctcaagca-gtctatgagaatttcccttgttctgtgtcttcatttgtaattgttattgttagtc-ttttaacgttagacaaactagtatgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataacga----------------------gCCGTT----TTCATcaggactg------agaccagtgtgaagcaagagaggcatctagggtacacaattta i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201235 245 + 58131712 tgtggtataaatatgtaagcgggtagctgcacccatttactttt-tct----ca-gtctatgagaatttcccttgttctgtatcttcatttgtaattgttattgttagtc-ttttaatattagacaaactagtacgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gccgtt----ttCATcaggactg------agaccagcgtgaagcaagagaggcatctagggtacacaattta i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8422129 245 - 10629787 TGTGATATAAATAT----GTGagtagctgcacccatttaccttt-tctccagca-gtctatgagaatttcccttgttatgtatcttcatttgtaattgttattgttagtc-ttttaatgttagacaaactagtatgtgtagaatggt-----atgtcattacagttttaattt-aaatttctctaacaaataatga----------------------gCCGTT----TTCATcaggactg------agaccagcgtgaagcaagagaggcatctagggtacacaattta i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228011 249 - 36342412 TGCAGTGTAAATATGTAAGTGGACAGCTTCATCCatttactttc-tcaccagca-gtctgtgagaatttccattgttccttaccttcatttataattgtcg-tgttagtctttttaatgttagacaaattggtgtatgtagaatggc-----gtgtcgttacggttttaattt-aaatttctttgaCACATAATAA----------------------ATAGTT----TTCATcagggccg------agatgagtgtgaagcaagagagcgcctaagggtacacaattta i otoGar3.GL873530 C 0 C 0 s canFam3.chr30 26827987 254 - 40214260 TACAAAGTAAATGTGTAAACGTgtagctttacccatttatttttctctccagca-atgtaggagaattctcaatgttctatttcttcatcaataattgttactgttagtatttttaatgttagagaatctggtgtgtgtacagtggt-----atcactttgtag-tttaattt-gaatttccctaatgaagaatg-----------------------gtcatt----ttt-tcatatttattTGATATGTCAGAATGAGTCATGACAGGCACCTAGGGTGCACAATTTA i canFam3.chr30 C 0 N 0 s dasNov3.JH579377 1086528 267 + 2868945 TGTGGGGTAAAT--------GGGCAGCTTtacccattgatacct-tctccagcgtgtcttagag---ttctcatgctccatatcttcattaaaa----ttatcttgcctt-ttttgatgttaggcaatttggtgtgtttacaatgatttcacataccattttagttttaatttgaaatctccttaattaaaattgaacagattttcatatgtttattggccatttgggtttATcaggactg------gggctagggtggggcaagggaaaaacctagggtgcaaaattta i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e manLeu1.NW_012108674v1 2596522 335 - 2620224 I a score=152833.000000 s hg38.chr14_KI270725v1_random 171493 41 + 172810 aggacgtgtttaatcccTTTCCTTTC-TGTCCTTGTTTGTG---A s panTro5.chr1 126798653 41 + 228573443 aggatgcgtttattcccTTTCCTTTC-TGTCCTTGTTTGTG---A i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409476 41 - 99763055 aggatgtatttattcccTTTCCTTTC-TGTCCTTGATTGTG---A i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555788 35 + 121039945 ------CATTTATTCACTTTCCTTTC-TGTCCTTGATTGTG---A i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208706 40 - 169600520 aggatgtgtttattcccTTTCCTTTC-TGTCCTTGTTTGTG---- i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147886278 40 - 171882078 aggatgtgtttattcccTTTCCTTTC-TGTCCTTGTTTGTG---- i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26959085 40 + 40200012 aggatgtgtttattcccTTTCCTTTC-TGTCCTTGTTTGTG---- i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411177 41 - 7633303 aggatgtgtttattcccTTTCCTTTC-TGTCCTTGTTTGTGA--- i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201480 41 + 58131712 aggatgtgtttattcccTTTCTCTTC-TGTCCTTGTTTGTG-A-- i chlSab2.chr26 C 0 C 0 s colAng1.NW_012121598v1 8422374 41 - 10629787 aggaTGTGTTTATTTCCTTTCCTTTC-TGTCCTTGTTTGTG--A- i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228260 40 - 36342412 agggtgggctcattcccCTTCATTTT-TCTCCTTATCTTTG---- i otoGar3.GL873530 C 0 I 1 s dasNov3.JH579377 1086795 41 + 2868945 aagaggtgctcatttcctttcccttcttttccctttttaaa---- i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e manLeu1.NW_012108674v1 2596522 335 - 2620224 I a score=140413.000000 s hg38.chr14_KI270725v1_random 171534 23 + 172810 TGAATTATTTCTACTTTATCAGA s panTro5.chr1 126798694 23 + 228573443 TGAATTATTTCTACTTTATCAAA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409517 23 - 99763055 TGAATTATTTCTACTTTATCAAA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555823 23 + 121039945 TGAATTATTTCTACTTTATCAAA i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208746 22 - 169600520 -GAATTATTTCTACTTTATCAAA i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147886318 22 - 171882078 -GAATTATTTCTACTTTATCAAA i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26959125 22 + 40200012 -GAATTACTTCTACTTTATCAAA i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411218 23 - 7633303 TGAATTATTTCTACTTTATCAAA i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201521 23 + 58131712 TGAATTATTTCTACTTTATCAAA i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596857 23 - 2620224 tGAATTATTTCTACTTTATCAAA i manLeu1.NW_012108674v1 I 335 C 0 s colAng1.NW_012121598v1 8422415 23 - 10629787 TGAATTATTTCTACTTTATCAAA i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228301 23 - 36342412 TGCATTATTTCTACTTAATCAAA i otoGar3.GL873530 I 1 C 0 s dasNov3.JH579377 1086836 22 + 2868945 tgca-catttgtacttcatcaaa i dasNov3.JH579377 C 0 I 164 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=1110977.000000 s hg38.chr14_KI270725v1_random 171557 204 + 172810 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttataagtccagtcaccttaccaaactggcttttatttctaattgtttgtagataatttttga-cattt--gtacatagccatgccatctccaaaatagcatttacctttccttttcaatatttacaaatttaatttattttaattgccttatcacact s panTro5.chr1 126798717 204 + 228573443 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttataaatccagtcaccttaccaaactggcttttatttctaactgtttgtagataatttttga-cattt--gtacatagccatgacatctccaaaatagcatttacctttccttttcaatatttgcaaatttaacttcttttatttgccttatcacact i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409540 203 - 99763055 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttataaatccagtcactttactaaactggcttttatttctaatttttcgtagataatttttga-tattt--gtacatagccatgccatctgcaaaatagcattta-ctttcctttgcaatatttacaaatttaacttcttttaattgccttatcacact i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53555846 203 + 121039945 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgctttttgctttttgtgcatttgttataaatccagtcactttactaaactggcttttatttctaattttttgtggataatttttga-tattt--gtgcatagccatgccatctgcaaaatagcattta-ctttcctttgcaatctttacaaatttaacttcttttaattgccttatcacact i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208768 200 - 169600520 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttatcaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttga-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttaacttcttttaattgccttatcacact i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147886340 200 - 171882078 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttatcaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttga-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttaacttcttttaattgccttatcacact i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26959147 200 + 40200012 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttatcaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttga-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttaacttcttttaattgccttatcacact i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411241 200 - 7633303 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatatttgctttttgtgcatttgttatcaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttga-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttaacttcttttaattgccttatcacact i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201544 200 + 58131712 CAAAAAGTTTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgattttcgctttttgtgcatttgttatcaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttga-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttagcttcttttaattgccttatcacact i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2596880 200 - 2620224 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttatcaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttga-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttaacttcttttaattgccttatcacact i manLeu1.NW_012108674v1 C 0 I 2193 s colAng1.NW_012121598v1 8422438 200 - 10629787 CAAAAAGTGTA--------------------------------------------------------------------------------------------------------------------------------------------------------ata-----------ggtatacaattgatttttgctttttgtgcatttgttataaatccagttactttactaaactggcttttatttc----tgtttgtaaataatttttgg-cattt--gtacatagccatgccatctgcaaaataacatttacctttcctttgcaatatttataaatttaacttcttttaattgccttatcacact i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228324 215 - 36342412 TAAATAGTACA--------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTATCTAATCGGTATGCCATTGATTTttgctttttgtgcattcatcatcaatctggccaccttactaaacagacgtttcattctaattgtttgtagatagttgtgga-tatgt--gcacatggccatggcatctgcaaaacagcatttacctctccttttcaatctttatacacttaacttctctctattgccttgtggcact i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1087022 341 + 2868945 caataagtatggaatatttctctatgtatatgggtcttcttaatttttttcactactgttttgtaggtcttatacattggtgaagtcatagctaggcatataattttggtgctattttaaatgacttttaaattttcatttttcaatttcttcatgctagtgtata-----------ggtacacaattaatttttgctttttgtgcattcaccataaatcc-------ttattaaatttacttttaatctaaattatctgtagataattttggaccatctaggcatatagacaggccatctgcaaaatagcatttaccttttctttctaatatttata-----------tttttattgccttGTTGCATT i dasNov3.JH579377 I 164 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=29796.000000 s hg38.chr14_KI270725v1_random 171761 4 + 172810 agct s panTro5.chr1 126798921 4 + 228573443 agct i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409743 4 - 99763055 agct i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556049 4 + 121039945 agct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146208968 4 - 169600520 agct i rheMac8.chr7 C 0 I 690 s macFas5.chr7 147886540 4 - 171882078 agct i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26959347 4 + 40200012 agct i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411441 4 - 7633303 agct i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201744 4 + 58131712 agct i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2599273 4 - 2620224 AGCT i manLeu1.NW_012108674v1 I 2193 C 0 s colAng1.NW_012121598v1 8422638 4 - 10629787 agct i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228539 4 - 36342412 agct i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1087363 4 + 2868945 AGCT i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I a score=14564.000000 s hg38.chr14_KI270725v1_random 171765 3 + 172810 ggg s panTro5.chr1 126798925 3 + 228573443 ggg i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409747 3 - 99763055 ggg i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556053 3 + 121039945 ggg i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147886544 3 - 171882078 tgg i macFas5.chr7 C 0 I 678 s macNem1.NW_012010577v1 26959351 3 + 40200012 ggg i macNem1.NW_012010577v1 C 0 I 687 s cerAty1.NW_012000887v1 4411445 3 - 7633303 ggg i cerAty1.NW_012000887v1 C 0 I 295 s chlSab2.chr26 36201748 3 + 58131712 ggg i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2599277 3 - 2620224 GGG i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8422642 3 - 10629787 gag i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228543 3 - 36342412 ggg i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1087367 3 + 2868945 GGA i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e rheMac8.chr7 146208972 690 - 169600520 I a score=23180.000000 s hg38.chr14_KI270725v1_random 171768 7 + 172810 gcCACTA s panTro5.chr1 126798928 7 + 228573443 gcCACTA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409750 7 - 99763055 gccacta i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556056 7 + 121039945 gccacta i nomLeu3.chr6 C 0 C 0 s chlSab2.chr26 36201751 7 + 58131712 gccacta i chlSab2.chr26 C 0 I 2 s manLeu1.NW_012108674v1 2599280 7 - 2620224 GCCACTA i manLeu1.NW_012108674v1 C 0 I 2 s colAng1.NW_012121598v1 8422645 7 - 10629787 gccacta i colAng1.NW_012121598v1 C 0 I 2 s otoGar3.GL873530 36228546 7 - 36342412 accacta i otoGar3.GL873530 C 0 C 0 s dasNov3.JH579377 1087370 7 + 2868945 GCCACTA i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2360955 9534 + 4596561 T e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e cerAty1.NW_012000887v1 4411448 295 - 7633303 I e macNem1.NW_012010577v1 26959354 687 + 40200012 I e macFas5.chr7 147886547 678 - 171882078 I e rheMac8.chr7 146208972 690 - 169600520 I a score=-49.000000 s hg38.chr14_KI270725v1_random 171775 1 + 172810 T s panTro5.chr1 126798935 1 + 228573443 T i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409757 1 - 99763055 g i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556063 1 + 121039945 g i nomLeu3.chr6 C 0 C 0 s rhiBie1.NW_016805531v1 2351421 1 + 4596561 G i rhiBie1.NW_016805531v1 T 9534 I 125 s otoGar3.GL873530 36228553 1 - 36342412 g i otoGar3.GL873530 C 0 I 1 s dasNov3.JH579377 1087377 1 + 2868945 G i dasNov3.JH579377 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e colAng1.NW_012121598v1 8422652 2 - 10629787 I e manLeu1.NW_012108674v1 2599287 2 - 2620224 I e chlSab2.chr26 36201758 2 + 58131712 I e cerAty1.NW_012000887v1 4411448 295 - 7633303 I e macNem1.NW_012010577v1 26959354 687 + 40200012 I e macFas5.chr7 147886547 678 - 171882078 I e rheMac8.chr7 146208972 690 - 169600520 I a score=276184.000000 s hg38.chr14_KI270725v1_random 171776 108 + 172810 -AAAtcttttatacttgttttgatgtctatagaaactgtagtgatgtcctctc-tttattaatttctcacactggtaatttctggtctctctttCTGGCTCACTGTTTAT s panTro5.chr1 126798936 109 + 228573443 -AAAtcttttatacttgttttgatgtctatagaaactgtaatgatgtcctctcttttattaatttctcacactggtaatttctggtctctctttctgtctcACTGTTTAT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409758 109 - 99763055 -taatcttttatacttcttttgatgtctatagaaactgtagtgatgtcctctcctttgttaatttctcacactggtcacttctggtctctctttctgtctcACTGTTTAC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556064 109 + 121039945 -aaatcttttatacttcttttgatgtctatagaaactgtagtgatgtcctctcctttgttaatttctcacactggtcatttctggtctctctttctgtctcactgtttat i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4411743 105 - 7633303 -AAAtcttttatacttcttttgatgtctatagaaactgtagtgatgtcctctcttttattaatttctcacactagtaatttctcgtttc----tctGTCTCACTGTTTAT i cerAty1.NW_012000887v1 I 295 C 0 s chlSab2.chr26 36201760 109 + 58131712 -GAAtcttttatacttcatttgatgtctatagaaactgtagtgacgtcctctcttttactaatttctcacactagtaatttctggtctctctttctgtctcACTGTTTAT i chlSab2.chr26 I 2 C 0 s manLeu1.NW_012108674v1 2599289 105 - 2620224 -AAAtcttttatacttcttttgatgtctatagaaactgtagtgatgtcctctcttttattaatttctcacactaataatttctcgtttc----tctGTCTCACTGTTTAT i manLeu1.NW_012108674v1 I 2 C 0 s colAng1.NW_012121598v1 8422654 109 - 10629787 -AAAtcttttatacttcttttgatgtctatagaaactgtagtggtgtcctctcttttattaatttctcacactggtaatttctggtctctctttctgtctcactgtttat i colAng1.NW_012121598v1 I 2 C 0 s otoGar3.GL873530 36228555 95 - 36342412 -CTGTcttttgtaattcttctgctgcctatggaatccgtagtgata-----tcttttatcaatttttgatact-gtgatttatgttttctcttcttgtgtc--------t i otoGar3.GL873530 I 1 C 0 s dasNov3.JH579377 1087378 92 + 2868945 aatatcttctgtaattcttttattctgtaca-aatttgtagag-----------------aatcttacagcatcttagattgtgctttctctctcttgttctatttttat i dasNov3.JH579377 C 0 N 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2351422 125 + 4596561 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e macNem1.NW_012010577v1 26959354 687 + 40200012 I e macFas5.chr7 147886547 678 - 171882078 I e rheMac8.chr7 146208972 690 - 169600520 I a score=10152.000000 s hg38.chr14_KI270725v1_random 171884 3 + 172810 CTT s panTro5.chr1 126799045 3 + 228573443 CTT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409867 3 - 99763055 CTT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556173 3 + 121039945 ctt i nomLeu3.chr6 C 0 C 0 s cerAty1.NW_012000887v1 4411848 3 - 7633303 CTT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201869 3 + 58131712 CTT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2599394 3 - 2620224 CTT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8422763 3 - 10629787 ctt i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228650 3 - 36342412 CTT i otoGar3.GL873530 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2351422 125 + 4596561 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e macNem1.NW_012010577v1 26959354 687 + 40200012 I e macFas5.chr7 147886547 678 - 171882078 I e rheMac8.chr7 146208972 690 - 169600520 I a score=24021.000000 s hg38.chr14_KI270725v1_random 171887 7 + 172810 TCTGTCA s panTro5.chr1 126799048 7 + 228573443 TCTGTCA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409870 7 - 99763055 TCTGTCA i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556176 7 + 121039945 tctGTCA i nomLeu3.chr6 C 0 C 0 s macFas5.chr7 147887225 7 - 171882078 TCTGTCA i macFas5.chr7 I 678 I 2 s cerAty1.NW_012000887v1 4411851 7 - 7633303 TCTGTCA i cerAty1.NW_012000887v1 C 0 I 2 s chlSab2.chr26 36201872 7 + 58131712 TCTGTCA i chlSab2.chr26 C 0 I 2 s manLeu1.NW_012108674v1 2599397 7 - 2620224 TCTGTCA i manLeu1.NW_012108674v1 C 0 I 2 s colAng1.NW_012121598v1 8422766 7 - 10629787 tctGTCA i colAng1.NW_012121598v1 C 0 I 2 s otoGar3.GL873530 36228653 5 - 36342412 TCTGT-- i otoGar3.GL873530 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2351422 125 + 4596561 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e macNem1.NW_012010577v1 26959354 687 + 40200012 I e rheMac8.chr7 146208972 690 - 169600520 I a score=21010.000000 s hg38.chr14_KI270725v1_random 171894 4 + 172810 CTCT s panTro5.chr1 126799055 4 + 228573443 CTCT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409877 4 - 99763055 CTCT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556183 4 + 121039945 CTCT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146209662 4 - 169600520 CTCT i rheMac8.chr7 I 690 C 0 s macFas5.chr7 147887234 4 - 171882078 CTCT i macFas5.chr7 I 2 C 0 s macNem1.NW_012010577v1 26960041 4 + 40200012 CTCT i macNem1.NW_012010577v1 I 687 C 0 s cerAty1.NW_012000887v1 4411860 4 - 7633303 CTCT i cerAty1.NW_012000887v1 I 2 C 0 s chlSab2.chr26 36201881 4 + 58131712 CTCT i chlSab2.chr26 I 2 C 0 s manLeu1.NW_012108674v1 2599406 4 - 2620224 CTCT i manLeu1.NW_012108674v1 I 2 C 0 s colAng1.NW_012121598v1 8422775 4 - 10629787 CTCT i colAng1.NW_012121598v1 I 2 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e rhiBie1.NW_016805531v1 2351422 125 + 4596561 I e nasLar1.chr7 130426267 2659 - 153844193 I e papAnu3.chr7 140818508 1503 - 162156779 I e otoGar3.GL873530 36228658 0 - 36342412 C a score=15678.000000 s hg38.chr14_KI270725v1_random 171898 2 + 172810 TT s panTro5.chr1 126799059 2 + 228573443 CT i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409881 2 - 99763055 CT i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556187 2 + 121039945 CT i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146209666 2 - 169600520 CT i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147887238 2 - 171882078 CT i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26960045 2 + 40200012 CT i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411864 2 - 7633303 CT i cerAty1.NW_012000887v1 C 0 C 0 s papAnu3.chr7 140820011 2 - 162156779 CT i papAnu3.chr7 I 1503 N 0 s chlSab2.chr26 36201885 2 + 58131712 CT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2599410 2 - 2620224 CT i manLeu1.NW_012108674v1 C 0 C 0 s nasLar1.chr7 130428926 2 - 153844193 CT i nasLar1.chr7 I 2659 N 0 s colAng1.NW_012121598v1 8422779 2 - 10629787 CT i colAng1.NW_012121598v1 C 0 C 0 s rhiBie1.NW_016805531v1 2351547 2 + 4596561 CT i rhiBie1.NW_016805531v1 I 125 N 0 e ponAbe2.chrUn 5835676 953 + 72422247 I e otoGar3.GL873530 36228658 0 - 36342412 C a score=68683.000000 s hg38.chr14_KI270725v1_random 171900 14 + 172810 TCCCCTCTTTCCCC s panTro5.chr1 126799061 14 + 228573443 TCCCCTCTTTCTCC i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409883 14 - 99763055 TCCCCTCTTTCTCC i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556189 14 + 121039945 TCCCCTCTTTCTCC i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146209668 14 - 169600520 TCCCTTCTTTCTCC i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147887240 14 - 171882078 TCCCTTCTTTCTCC i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26960047 14 + 40200012 TCCCCTCTTTCTCC i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411866 14 - 7633303 TCCCCTCTTTCTCC i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201887 14 + 58131712 TCCCCTCTTTCTCC i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2599412 14 - 2620224 TCCCCTCTTTCTCC i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8422781 14 - 10629787 TCCCCTCTTTCTCC i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228658 2 - 36342412 ------------CC i otoGar3.GL873530 C 0 C 0 e ponAbe2.chrUn 5835676 953 + 72422247 I a score=22065.000000 s hg38.chr14_KI270725v1_random 171914 4 + 172810 gtgt s panTro5.chr1 126799075 4 + 228573443 atgt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409897 4 - 99763055 Atgt i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5836629 4 + 72422247 gtgt i ponAbe2.chrUn I 953 I 429 s nomLeu3.chr6 53556203 4 + 121039945 gtgt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146209682 4 - 169600520 gtgt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147887254 4 - 171882078 gtgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26960061 4 + 40200012 gtgt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4411880 4 - 7633303 GTGT i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36201901 4 + 58131712 ATGT i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2599426 4 - 2620224 GTGT i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8422795 4 - 10629787 gtgt i colAng1.NW_012121598v1 C 0 C 0 s otoGar3.GL873530 36228660 4 - 36342412 TTAT i otoGar3.GL873530 C 0 C 0 a score=2055650.000000 s hg38.chr14_KI270725v1_random 171918 430 + 172810 gtatgtatgtatgtgtgagtgtgtgtctgtatAAAAGAATTTAAATATAcggatagtccttgacttaatgatggtttgacttacaa-tttttcaactttacaatactgcaaaaCAATCACAATTTCAACataatgtaccatattcaatacactacatgagagattcaacactttctgat-aaagtaggctttctgttagataattttgcccaac-tgtaagctaatgttagtgcactgagcatgtttaaggtaggctaggctaagcgatgatgtttggcaggttgggtatattaaatgcattttctacttatgatattttcaa-ttatattgggcttaccaggatgtaaccctatcataagttgaggaacaactgTACTA-CAATTATACAATTATAAAGAGATTCATTATTTTTTTCTAGGCAAAACTTTTTTT- s panTro5.chr1 126799079 424 + 228573443 gtatgtatgtgtgt----gtgtgtgtctgtatAAAAGAATTTAAATATAcagatagtccttgacttaatgatggtttgacttacaa-ttttttgactttacaatactgcaaaacaatcacaatttcaacataatgtaccatattcaatacattacatgagacattcaatactttctgat-aaagtaggctttctgttagataattttgcccaac-tgtaggctaatgttagtgcactgagcatgtttaaggtaggctaggctaagcgatgatgtttggcaggttgggtatattaaatacattttctacttatgatattttcaa-ttatattgggcttatcaggatgtaaccctatcacaagttgaggaac-tctgTACTA-TAATTATGCAATTATAAAGAGATTCATTATTTTTTTCCAGGCAAAAC-TTTTTT- i panTro5.chr1 C 0 C 0 s panPan2.chr15 55409901 425 - 99763055 gtatgtatgtgt------gtgtgtgtctgtatgAAAGAATTTAAATATAcagatagtccttgacttactgatggtttgatttacaa-tttttcaactttacaatgctgcaaaaCAATCACAATTTCAAAataatgtaccatattcaataaattacatgagagattcaacactttcttataaaaatacgctttctgttagataattttgcccaac-tgtaggctaatgttagtgctctgaacatgtttaaggtagactgggctaagctatgatgtttggcaggttaggcgtattaaatacatgttctacttatgatatcttcaatttatattggacttaccaggatgtaacactatcataagttgaggaacatctgTACTA-TAATTAGGCAATTATAAAGAGATTCATTATTTTTTTCCAGGAAAAAC-TTTTTT- i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556207 424 + 121039945 gtatgtatgtgt------gtgtgtgtctgtATAAAAGAACTTAAATATAcagatagtccttgacttaatgatggtttgatttacaa-tttttcaactttacaatgctgcaaaaCAATCACAATTTCAAAataatgtatcatattcaatacattacataagagattcaacactttcttat-aaaacaggctttctgttagataattttgcccaac-tgtaggctaatgttagtgctctgaacatgtttaaggtaggctgggctaagctatgatgtttggcaggttaggcatattaaatgcatgttctacttatgatatcttcaatttatattgggcttatcaggatgtaaccctatcataagttgaggaacatctgTACTA-TAATTAGGCAATTATAAAGATATTCATTATTTTTTTCCAGGAAAAAC-TTTTTT- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146209686 424 - 169600520 gtatgtatatgt------gtgtgtgtCTATATAAAAGAATTTAAATATATagatagtccttgacctaatgatggtttgacttacaa--tttttgactttacaatgctgcaaaaCAATCACAATTTCAACataatgtaccatattcaatacattacatgagagattcaactctttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttagtgctctgagcatgtttaaggtagacgaggctaagctatgatgtttggcaggttaggtgtattaaatgcattttctacttatgatatttccagtttatattgagcttatcaggatgtaatcctatcataagctgaggaaaatctgTACTA-TAATCAGGCAATTATAAAGAGATTCATTATTTTATTCCAGGAAAAAC-TATTTT- i rheMac8.chr7 C 0 I 1 s macFas5.chr7 147887258 424 - 171882078 gtatgtatatgt------gtgtgtgtCTATATAAAAGAATTTAAATATATagatagtccttgacctaatgatggtttgacttacaa--tttttgactttacaatgctgcaaaacaatcacaatttcaacataatgtaccatattcaatacattacatgagagattcaactctttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttagtgctctgagcatgtttaaggtagacgaggctaagctatgatgtttggcaggttaggtgtattaaatgcattttctacttatgatatttccagtttatattgagcttatcaggatgtaatcctatcataagctgaggaaaatctgTACTA-TAATCAGGCAATTATAAAGAGATTCATTATTTTATTCCAGGAAAAAC-TATTTT- i macFas5.chr7 C 0 I 1 s macNem1.NW_012010577v1 26960065 424 + 40200012 gtatgtatatgt------gtgtgtgtCTATATAAAAGAATTTAAATATATagatagtccttgacctaatgatggtttgacttacaa--tttttgactttacaatgctgcaaaaCAATCACAATTTCAACataatgtaccatattcaatacattacatgagagattcaactctttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttagtgctctgagcatgtttaaggtagacgaggctaagctatgatgtttggcaggttaggtgtattaaatgcattttctacttatgatatttccaatttatattgagcttatcaggatgtaatcctatcataagctgaggaaaatctgTACTA-TAATCAGGCAATTATAAAGAGATTCATTATTTTATTCCAGGAAAAAC-TATTTT- i macNem1.NW_012010577v1 C 0 I 1 s cerAty1.NW_012000887v1 4411884 422 - 7633303 GTATGTATATGT------GTATGTGTCTATATAAAAGAATTTAAATATATagatagttcttgaccta---atggtttgacttacaa-ttttttgactttacaatgctgcaaaacaatcacgatttcaacataatgtaccatattccatacattacatgacagattcaacactttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttagtgctttgagcatgtttaaggtagactagactaagctatgatgtttggcaggttaggtgtattaaatgcattttctacttatgatatttccaatgtatattgagcttatcaggatgtaatcctatcataagctgaggaacatctgTACTA-TAATCAGGCAATTATAAAGAGATTCATTATTTTATTCCAGGAAAAAC-TATTTT- i cerAty1.NW_012000887v1 C 0 I 1 s chlSab2.chr26 36201905 425 + 58131712 GTATGTATATGT------GTGTGTGTCTATATAAAAGAATTTAAATATATagatagtccttgacctaatgatggtttgacttacaa-ttttttgactttacaatgctgcaaagcaatcacagtttcaacataatgtaccatattccatacattacatgacagattcaacactttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttagtgctctgagcatgtttaaggtagactaggctaagctgtgatgtttggcaggttaggtgtattaaatgtattttctacttatgatatttccaatgtatattgagcttatcaggatgtaatcctatcataagctgaggaacatctgTACTA-TAATTAGGCAATTATAAAGAGATTCATTATTTTATTCCAGGAAAAAC-TATTTT- i chlSab2.chr26 C 0 I 1 s manLeu1.NW_012108674v1 2599430 425 - 2620224 GTATGTATATGT------GTATGTGTCTATATAAAAGAATTTAAATATATagatagttcttgacctaatgatggtttgacttacaa-ttttttgactttacaatgctgcaaaacaatcacgatttcaacataatgtaccatattccatacattacatgacagattcaacactttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttagtgctttgagcatgtttaaggtagactaggctaagctatgatgtttggcaggttaggtgtattaaatgcattttctacttatgatatttccaatgtatattgagcttatcaggatgtaatcctatcataagctaaggaacatctgTACTA-TAATCAGGCAATTATAAAGAGATTCATTATTTCATTCCAGGAAAAAC-TATTTC- i manLeu1.NW_012108674v1 C 0 I 1 s colAng1.NW_012121598v1 8422799 425 - 10629787 gtatgtatatgt------gtgtgtgtctgtATAAAAGAATTTAAATATATagatagtccttgacctaatgatggtttgacttacaa-ttttttgactttacaatgctgtaaaaCAATCACAATTTCAACataatgtaccatattcaatacattacatgagagattcaacactttcttat-aaaataggctttccgttagataattttgcccaacatgtagggtaatgttactgctctgagcatgtttaaggtagactaggctaagctatgatgtttggcaggttaggtgtattaaatacattttctacttatgatatttccaatttatattgaggttatcaggatgtaatcctatcataagctgaggaacatctgTACTA-TAATTAGGCAATTATAAAGAGATTCATTATTTTATTCCAGGAAAAAC-TATTTT- i colAng1.NW_012121598v1 C 0 I 1 s otoGar3.GL873530 36228664 378 - 36342412 ATACACAGATAT------G---------ACATCA------TTAAATATACAAATTGTTCTCAACTTAGTAATAGTTTAACTTGCATTTTTTTTTACATTATGATGGta-----------------caatgtaatgtacactatgca--aaattacatgtgatatttaacactttcttgt-aaaatgcgctttgtattagatgactttgcttaac-cgtaggcta--------------agcacttttaaagtaggctaaactcagctgtgatgttcagtagg-taggcatagtaaatgcattttcaatttatgatctattcaacttatgatggttttgtcagaatacaagcccgttataaatcgaggaatgtctgTATTAGTTTTTAAGCAATTATAAACAAGTTTATCAGTTTTTTAAGGAGAAACC-TTTTTTC i otoGar3.GL873530 C 0 C 0 e ponAbe2.chrUn 5836633 429 + 72422247 I a score=1659.000000 s hg38.chr14_KI270725v1_random 172348 2 + 172810 TG s panTro5.chr1 126799503 2 + 228573443 TA i panTro5.chr1 C 0 C 0 s panPan2.chr15 55410326 2 - 99763055 TG i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5837062 2 + 72422247 TA i ponAbe2.chrUn I 429 I 218 s nomLeu3.chr6 53556631 2 + 121039945 TG i nomLeu3.chr6 C 0 C 0 s otoGar3.GL873530 36229042 2 - 36342412 TA i otoGar3.GL873530 C 0 C 0 e colAng1.NW_012121598v1 8423224 1 - 10629787 I e manLeu1.NW_012108674v1 2599855 1 - 2620224 I e chlSab2.chr26 36202330 1 + 58131712 I e cerAty1.NW_012000887v1 4412306 1 - 7633303 I e macNem1.NW_012010577v1 26960489 1 + 40200012 I e macFas5.chr7 147887682 1 - 171882078 I e rheMac8.chr7 146210110 1 - 169600520 I a score=178869.000000 s hg38.chr14_KI270725v1_random 172350 43 + 172810 TTGTTGATTTT-TCTCTTATATGTCTGCtgtatttgtcagtttt s panTro5.chr1 126799505 43 + 228573443 TTGTTGATTtt-tctcttatatgtctgctgtattagtcagtttt i panTro5.chr1 C 0 C 0 s panPan2.chr15 55410328 43 - 99763055 TTGCTGATTTT-TCTCTTATATGTCTGCtgtattagtcagtttt i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556633 43 + 121039945 TTGTTGATTTT-TCTCTTATATGTCTGCtgtgttagtcagtttt i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146210111 43 - 169600520 CTATTTATTTT-TCAATTATGTGTCAGCtgtattagtcagtttt i rheMac8.chr7 I 1 C 0 s macFas5.chr7 147887683 43 - 171882078 CTATTTATTTT-TCAATTATGTGTCAGCtgtattagtcagtttt i macFas5.chr7 I 1 C 0 s macNem1.NW_012010577v1 26960490 43 + 40200012 CTATTTATTTT-TCAATTATGTGTCAGCtgtattagtcagtttt i macNem1.NW_012010577v1 I 1 C 0 s cerAty1.NW_012000887v1 4412307 43 - 7633303 CTATTTATTTT-TCAATTATATGTCTGCtgtattagtcagtttt i cerAty1.NW_012000887v1 I 1 C 0 s chlSab2.chr26 36202331 39 + 58131712 CTATTTATTTT-TCAATTATATGTCTGCTTtatt----agtttt i chlSab2.chr26 I 1 C 0 s manLeu1.NW_012108674v1 2599856 43 - 2620224 CTATTTATTTT-TCAATTATATGTCTGCtgtattagtcagtttt i manLeu1.NW_012108674v1 I 1 C 0 s colAng1.NW_012121598v1 8423225 43 - 10629787 CTATTTATTTT-TCAAATATATGTTAGCtgtattagtcagtttt i colAng1.NW_012121598v1 I 1 C 0 s otoGar3.GL873530 36229044 41 - 36342412 ---TTGATTTTCTTTCTTGTATGTCCTCTATTTTAATGATTTCT i otoGar3.GL873530 C 0 N 0 e ponAbe2.chrUn 5837064 218 + 72422247 I a score=833811.000000 s hg38.chr14_KI270725v1_random 172393 187 + 172810 caaattactgtaaatatactacctgagactggataatttataaataaaaatgatttacttgattcacagttctgcatggctggggaggcctcaggaaacatacaaccatgacagaaggtaaaagagaagcaaggcacatcttacatggcagcaggagagagagcaggaaaaactgccaCtttttttt s panTro5.chr1 126799548 180 + 228573443 catattactataaagatactacgtgagactgggtaatttataaataaaaatgatttacttgattcacagttctgcatggctggggaggcctcaggaaacatacaatcatgacaaaaggtaaaggagaagcaaggcacaacttacatggaagcaggagagagagtaggaaaaactgacaa-------t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55410371 180 - 99763055 caaattactataaagatagtaactgagactgggtaatttataaatataaatgatttacttgattcacagttctgcatggctggggaggccccaggaaacatacaatcatgacagaaggtaaaggagaagcaaggcacatcttacatggcagcaggagagagagcaggaaaaactgccac-------t i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556676 185 + 121039945 caaattactataaagatactacctgagactgggtaatttataaatagaaatgatttacttgattcacagttctgcgtggctggggaggccccaggaaacacacaatcatgacagaaggtaaaggagaagcaaggcacatcttacatggcagcaggagagagagcaggaaaaactgccattttttt-- i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146210154 186 - 169600520 caaattactgttaagatactacctgagactgggtaatttataaataaaaatgatttatttggttcacagttctacatggctgaggaggccttaggaagcatacaatcatgacagaagataaaggagaagc-aggcacatcttacatggcagcaggagagagagcaggaaacactgccactttctttc i rheMac8.chr7 C 0 I 2 s macFas5.chr7 147887726 186 - 171882078 caaattactgttaagatactacctgagactgggtaatttataaataaaaatgatttatttggttcacagttctacatggctgaggaggccttaggaagcatacaatcatgacagaagataaaggagaagc-aggcacatcttacatggcagcaggagagagagcaggaaacactgccactttctttc i macFas5.chr7 C 0 I 2 s macNem1.NW_012010577v1 26960533 186 + 40200012 caaattactgttaagatactacctgagactgggtaatttataaataaaaatgatttatttggttcacagttctacatggctgaggaggccttaggaagcatacaatcatgacagaagataaaggagaagc-aggcacatcttacatggcagcaggagagagagcaggaaacactgccactttctttc i macNem1.NW_012010577v1 C 0 I 5 s cerAty1.NW_012000887v1 4412350 187 - 7633303 caaattactgttaagatactacctgagactgggtaatttataaataaaaatgatttatttggttcatagttctaaatggctgaggaggccttaggaaacatacaatcatgacagaaggtaaaggagaagcaaggcacatcttacatggcagcaggagagagagcaggaaacactgccactttctttt i cerAty1.NW_012000887v1 C 0 I 13 s chlSab2.chr26 36202370 187 + 58131712 catattactgttaagatactacctgagactgggtaatttataaatataaatgatttatttggttcatagttctacatggcttaggaggccttaggaaacatacaatcatgacagaaggtaaaggagaagcaaggcacatcttacatggcagcaggagaaagagcaggaaacactgacactttctttt i chlSab2.chr26 C 0 I 2 s manLeu1.NW_012108674v1 2599899 187 - 2620224 caaattactgttaagatactacctgagactgggtaatttataaataaaaatgatttatttggttcatagttctaaatggctgaggaggccttaggaaacatacaatcatgacagaaggtaaaggagaagcaaggcacatcttacatggcagcaggagagagagcaggaaacactgccactttctttt i manLeu1.NW_012108674v1 C 0 I 6 s colAng1.NW_012121598v1 8423268 187 - 10629787 caaattactgttaagatactacctgagactgggtaatttataaataaaaatgatttatttggttcacagttctacatggctgaggaggccttaggaaacatagaatcatgacagaagataaaggagaagcaaggcacatcttacatggcagcaggagagagagcaggaaacactgccactttctttt i colAng1.NW_012121598v1 C 0 I 5 e ponAbe2.chrUn 5837064 218 + 72422247 I a score=4664.000000 s hg38.chr14_KI270725v1_random 172580 1 + 172810 t s panTro5.chr1 126799728 1 + 228573443 t i panTro5.chr1 C 0 C 0 s panPan2.chr15 55410551 1 - 99763055 t i panPan2.chr15 C 0 C 0 s ponAbe2.chrUn 5837282 1 + 72422247 t i ponAbe2.chrUn I 218 N 0 s nomLeu3.chr6 53556861 1 + 121039945 t i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146210342 1 - 169600520 t i rheMac8.chr7 I 2 C 0 s macFas5.chr7 147887914 1 - 171882078 t i macFas5.chr7 I 2 C 0 s macNem1.NW_012010577v1 26960724 1 + 40200012 t i macNem1.NW_012010577v1 I 5 C 0 s cerAty1.NW_012000887v1 4412550 1 - 7633303 t i cerAty1.NW_012000887v1 I 13 C 0 s chlSab2.chr26 36202559 1 + 58131712 t i chlSab2.chr26 I 2 C 0 s manLeu1.NW_012108674v1 2600092 1 - 2620224 t i manLeu1.NW_012108674v1 I 6 C 0 s colAng1.NW_012121598v1 8423460 1 - 10629787 c i colAng1.NW_012121598v1 I 5 C 0 a score=986943.000000 s hg38.chr14_KI270725v1_random 172581 225 + 172810 ttttttttttttttgagacagagtcttgctgtgtagcccagactggagtgcagtggtgtgatctcagctcacttcaacctccgcctgccaggttcaagtgattcccctgtctcagcctcatgagtagttgagattacagtcatgtgccactatacccagctaatttttttgtatttttagtagagatggagttttgccatgttggccagctggttttgaattcct s panTro5.chr1 126799729 225 + 228573443 ttttttttttttttgagacagagtcttgctgtgtagcccatactggagtgcagtggtgtgatcttgggtcactgcaacctccacctcccaggttcaagtgattcccctgtctcagcctcctgagtagctgagattacaggcgtctgccactatacccagctaaattttttgtctttttagtagagatggggttttgccatgttggccagctggttttgaactcct i panTro5.chr1 C 0 N 0 s panPan2.chr15 55410552 223 - 99763055 ttttttttttttttgagacagagtcttgctgtgtagcccagactgg-gtgcagtggtgtgatattggctcactgcaacccccacctcccaggttcaagtgattcccctgtcacagcctcccgagtagctgagattacaggtgtgtgccactatatccagctaa-ttttttgcatttttagtagagatggggttttgccatgttggccaactggttttgaactcct i panPan2.chr15 C 0 C 0 s nomLeu3.chr6 53556862 222 + 121039945 ttttttttttttttgagac--agtcttgctgtgtagcccagactggagtgcagtggtgtgatctcagctcactgcaacccccgcctcccagattcaagtgattcccctgttacagcgtcctgagtagctgagattacaggtgtttgccactatacccagctaa-ttttttgtatttttagtagagatggggttttgccatgttgcccagctggttttgaactcct i nomLeu3.chr6 C 0 C 0 s rheMac8.chr7 146210343 221 - 169600520 ctttttttttttttgaaac--agtcttcctgtgtagtccaagctggagtgcagtggtgtgatctcgactcactgcaacccctgcctcccgagttcaagtgattctcctgtctcagtctcctgagtagctgagattacaggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatggggtttcaccatgttggccagctggttttgaactcgt i rheMac8.chr7 C 0 C 0 s macFas5.chr7 147887915 221 - 171882078 ctttttttttttttgaaac--agtcttcctgtgtagtccaagctggagtgcagtggtgtgatctcggctcactgcaacccctgcctcccgagttcaagtgattctcctgtctcagtctcctgagtagctgagattacaggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatggggtttcaccatgttggccagctggttttgaactcgt i macFas5.chr7 C 0 C 0 s macNem1.NW_012010577v1 26960725 221 + 40200012 ttttttttttttttgaaac--agtcttcctgtgtagtccaagctggagtgcagtggtgtgatctcggctcactgcaacccctgcctcccgagttcaagtgattctcctgtctcagtctcctgagtagctgagattacaggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatggggtttcaccatgttggccagctggttttgaactcgt i macNem1.NW_012010577v1 C 0 C 0 s cerAty1.NW_012000887v1 4412551 221 - 7633303 ttttttttttttttgagac--agtcttcctgtgtagtccaagctggagtgcagtggcgtgatctcggctcactgcaacccccgcctcccaagttcaagtgattctcctgtctcagtctcctgagtagctgagattacaggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatggggtttcgccatgttggccagctggttttgaattcgt i cerAty1.NW_012000887v1 C 0 C 0 s chlSab2.chr26 36202560 221 + 58131712 ttttttttttttttaagac--agtcttcctgtgtagtccaagctggagtgcagtggcgtgatctcggctcactgcaacccccgcctcccgagttcaagtgattctcctgtctcagtctcctgagtagctgagattacaggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatgggtttttgccatgttggccagctggttttgaactcgt i chlSab2.chr26 C 0 C 0 s manLeu1.NW_012108674v1 2600093 221 - 2620224 ttttttttttttttgagac--agtcctcctgtgtagtccaagctggagtacagtggcgtgatctcggctcactgcaacccccgcctcccaagttcaagtgattctcctgtctcagtctcccgagtagctgagattacaggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatggggtttcgccatgttgaccagctggttttgaattcgt i manLeu1.NW_012108674v1 C 0 C 0 s colAng1.NW_012121598v1 8423461 220 - 10629787 ttttttttttttttcagac--agtcttcctgtgtagtccaagctggagtgtagtggcgtgatctcggctcactgcaacccccgcctcccgggttcaagtgattctcctgtctcagt-tcctaagtagctgagattataggtgtgtgccactacacccagctaa--tttttgtatttttagtggagatgggttttcgccatgttggccagctggttttgaactcat i colAng1.NW_012121598v1 C 0 C 0 a score=17190.000000 s hg38.chr14_KI270725v1_random 172806 4 + 172810 gatc s panPan2.chr15 55410775 4 - 99763055 gatc i panPan2.chr15 C 0 N 0 s nomLeu3.chr6 53557084 4 + 121039945 gatc i nomLeu3.chr6 C 0 N 0 s rheMac8.chr7 146210564 4 - 169600520 gatc i rheMac8.chr7 C 0 N 0 s macFas5.chr7 147888136 4 - 171882078 gatc i macFas5.chr7 C 0 N 0 s macNem1.NW_012010577v1 26960946 4 + 40200012 gatc i macNem1.NW_012010577v1 C 0 N 0 s cerAty1.NW_012000887v1 4412772 4 - 7633303 gatc i cerAty1.NW_012000887v1 C 0 N 0 s chlSab2.chr26 36202781 4 + 58131712 gatc i chlSab2.chr26 C 0 N 0 s manLeu1.NW_012108674v1 2600314 4 - 2620224 gatc i manLeu1.NW_012108674v1 C 0 N 0 s colAng1.NW_012121598v1 8423681 4 - 10629787 gatc i colAng1.NW_012121598v1 C 0 N 0