##maf version=1 scoring=roast.v3.3 a score=200294.000000 s hg38.chr16_GL383557v1_alt 0 732 + 89672 gaattctcattagtaagtgtagtaggcatgagataaatagaaaatcatcattaaaacactatagtaatcattgttgcaggcaagatccaatgatttatgctaaaattactgggcaaaagtttaaagaataactgtgtgtttgcataatctcaccatattttccaagatacttattaattacaaaggaaacagtggctcacgcctgtaatcccagtactttgggaggccaaggcaagcggatcatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaacgatacaaaaaatcagccgggcgtggtggcgcgagcctgtaattccagctactagggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcgcaccactgcactccagcctgggcaacagggcaagactccgtctcaaaaaaaaaaaaaaaaaaattgcaaaggaaaaatagtaactttatgtggagaaacatgacagtaatcaaggtttatatgactagattaagaaatattgaagtcatatcccacccctgcccaatatgatacactgagaatgatacatcacttctctggtttccttcccaagaatgagtaacctccatatattcatgatgaaataagacaaacccaattgagggacattctacaaaaccactgaccagtattcttctaaagtgtcaaggtcat s panTro5.chr16 21426221 730 - 81586097 gaattctcattagtaagtgtagtaggcatgagataaatagaaaatcatcattaaaacactatagtaataattgttgcaggcaagatccactgatttatgctaaaattactgggcaaaagtttaaagaataactgtgtgtttgcataatctcaccatattttccaagatatttattaattacaaaggaaacagtggctcacgcctgtaatcccagtactttgggaggccaaggcaagcggatcatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctagtaaagatacaaaaaatcagccgggcatggtggcgcgagcctgtaattccagctactagggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagggcaagactccgtctcaaaaaaaaaaaaaaaaa--ttgcaaaggaaaaatagtaactttatgtggagaaacatgacagtaatcaaggtttatatgactagattaagaaatattgaagtcataccccacccctgcccaatatgatacactgagaatgatacatcacttctctggtttccttcccaagaatgagtaacctccatatattcatgatgaaatgagacaaacccaattgagggacattctacaaaaccactgaccagtattcttctaaagtgtcaaggtcat i panTro5.chr16 N 0 C 0 s gorGor5.CYUI01000018v1 725813 731 + 3010529 gaattctcattagtaagtgtagtaggcatgagataaatagaaaatcatcattaaaacactatagtaataattgttgcaggcaagatccactgatttatgctaaaattactgggcaaaagtttaaagaataagtgtgtgtttgcataatctcaccatattttccaagatatttattaattacaaaggaaacagtggctcacgcctgtaatcccagtactctgggaggccaaggcaagcggatcatgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaagatacaaaaaatcagcagggcgtggtggcgcgagcctgtaattccagctactagggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagatcgcaccattgcactccagcctgggcaacagggcaagactccgtctcaaaaaaaaaaaaaaaaaaattgcaaaggaaaaatagtaactttatgtggataaacatgacagtaatcaaggtttatatgactagattaagaaatattgaagtcata-cccacccctgcccaatatgatacactgagaatgatacatcacttctctggtttccttcccaagaatgcataacctccatatattcatgatgaaatgagacaaacccaattgagggacattctacaaaaccactgaccagtattcttctaaagtgtcaaggtcat i gorGor5.CYUI01000018v1 N 0 C 0 a score=6729.000000 s hg38.chr16_GL383557v1_alt 732 17 + 89672 aaaagaaaagacaagac s panTro5.chr16 21426951 17 - 81586097 aaaagaaaagacaagac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 726544 12 + 3010529 -----aaaagacaagac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834029 17 + 163208435 aaaaggaaagccaagac i nomLeu3.chr2 N 0 C 0 a score=191085.000000 s hg38.chr16_GL383557v1_alt 749 295 + 89672 tgaagaactgtcggccgggtgtggtggctcacgcctgtaatcccaacacttcgggaggctgaggcgggtggatcac--gaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctac-aaacaaaatac-aaaaaactagtcgggcatggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaatccagaaggcggagcttgcagtgagccgagattgggccactgcactccagcctggatgacagagcgagactccgtctc s panTro5.chr16 21426968 295 - 81586097 tgaagaactgtcggccgggcgtggtggctcacgcctgtaatcccaacactttgggaggctgaggcgggcggatcac--caggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctac-aaacaaaatac-aaaaaactagtcgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaacccagaaggcggagcttgcagtcagccgagattgggccactgcactccagcctggatgacagagcgagactccgtctc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 726556 296 + 3010529 tgaagaactgtcggccgggcgtggtggctcacgcctgtaatcccaacactttgggaggctgaggcgggcggatcac--gaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaacaaaatac-aaaaaactagtcgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaacccggaaggcggagcttgcagtgagccgagattgggccactgcactccagcctggacaacagagcgagactctgtctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834046 297 + 163208435 tgaagaactgtcggccaggcgcggtggctcatgcctgtaattccaacactttgggaggccgaggagggtggatcac--gaggtcaggagatcgagaccatcctggctaacataatgaaaccctgtctctactaaacaaaatacaaaaaaactaaccgggcgtggtggcaggcgcctgtagccccagctgcttgggaggctgaggcaggagaatggcgtgaacccgggaagcagagcttgcagtgagccaagactgcgccactgtactccagcctgggcaacagagcgagactccatctc i nomLeu3.chr2 C 0 C 0 s otoGar3.GL873566 13646430 266 + 13852661 taaataacta--ggctgggcatggtggctcacacctggaatcctagcactatgggaggc------aggtgaattgcctgagcatacaagttctagaccagcctaa--gccagagcgagaccccatctct---------------aaaaa--tagctgggcattgtggcaggtgcctgtagtcccagctatgggagaggctgaggcaagagaactgcttgagctcaagagtttgaggttgctgtgagctgtgac---accacaacactttag---ggacaacacaatgagactttgtctc i otoGar3.GL873566 N 0 C 0 a score=5439.000000 s hg38.chr16_GL383557v1_alt 1044 13 + 89672 -aaaaaaaaaacaa--- s panTro5.chr16 21427263 13 - 81586097 -aaaaaaaaaaaaa--- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 726852 13 + 3010529 -aaaaaaaaaaaaa--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834343 13 + 163208435 -aaaaaacaaaaca--- i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21483321 12 - 44557958 --aaagacaagact--- i calJac3.chr20 N 0 I 4 s saiBol1.JH378225 6294399 12 + 6628207 --aaagacaagact--- i saiBol1.JH378225 N 0 I 4 s otoGar3.GL873566 13646696 17 + 13852661 caaaaaaaagaaTataa i otoGar3.GL873566 C 0 C 0 a score=371731.000000 s hg38.chr16_GL383557v1_alt 1057 105 + 89672 aa-------------------------ctgtcacagattggaggaa----------------------------------acaaaggaaacatgacaacgaagtgtaatgtgggatcctggaacagaaaaaggacatta-------------------------ctggaaaaatgggtgaaaaccataa s panTro5.chr16 21427276 112 - 81586097 aaa------------------aaaaaactgtcacagattggaggaa----------------------------------acaaaggaaacatgacaacgaagtgtaatgtgggatcctggaacagaaaaaggacatta-------------------------gtggaaaaatgggtgaaaaccataa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 726865 110 + 3010529 aa--------------------aaaaactgtcacagattggaggaa----------------------------------acaaaggaaacatgacaacgaagtgtaatgtgggatcctggaacagaaaaaggacatta-------------------------gtggaaaaatgggtgaaaaccataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834356 130 + 163208435 aaacaaaacaaacaaacaaacaaaaaactgtcacagattggaggaa----------------------------------acaaaggaaacatgacaacgaagtgtaatatgggatcctggaacagaaaaagggcatta-------------------------gtggaaaaatgggtgaaaaccataa i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20745678 104 + 43916225 -------------------------aactgtcacagattggaggaa----------------------------------acaaaggaaacgtgacaacaaagtgtaatgtgggatcctggaagagaaaaaggatatta-------------------------gt-gaaaaatgggtgaaaaccataa i cerAty1.NW_011999143v1 N 0 C 0 s chlSab2.chr5 58182580 104 + 75399963 -------------------------aactgtcacagattggaggaa----------------------------------acaaaggaaacgtgacaacaaagtgtaatgtgggatcctggaacagaaaaaggatatta-------------------------gt-gaaaaatgggtgaaaaccataa i chlSab2.chr5 N 0 C 0 s manLeu1.NW_012101698v1 6731832 104 - 7209941 -------------------------aactatcacagattggaggaa----------------------------------acaaaggaaacgtgacaacaaagtgtaatgtgggatcctggaagagaaaaaggatatta-------------------------gt-gaaaaatgggtgaaaaccataa i manLeu1.NW_012101698v1 N 0 C 0 s colAng1.NW_012123265v1 472569 105 + 3907144 -------------------------aactgtcacagattggaggaa----------------------------------acaaaggaaaagtgacaacaaagtgtaatgtgggatcctggaacagaaaaaggatatta-------------------------gtggaaaaatgggtgaaaaccataa i colAng1.NW_012123265v1 N 0 C 0 s calJac3.chr20 21483337 105 - 44557958 -------------------------aactgtcacagattggaggaa----------------------------------acaaaagaagcatgacaacaaagtgtaatgtgggatccttgaacagaaaaaggacatta-------------------------gtggaaaaatgggtgaaaaccataa i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6294415 105 + 6628207 -------------------------aactgtcacagattggaggaa----------------------------------acaaaagaaacatgacaacaaagtgtaatgtgggatcctcgaacagaaaaaggatatca-------------------------gtggaaaaatgggtgaaaaccataa i saiBol1.JH378225 I 4 C 0 s otoGar3.GL873566 13646713 163 + 13852661 -----------------------ataaatg--aatgaatggatgaatgggggggtgagggagaaagattagctctttcttacagaaaaattctaattaataagtgtaa-aaagaatgaaaaaatagaaaataatcattaaaacaccatataataatcctcgtaggtaagaccactgatgaacaccaaaa i otoGar3.GL873566 C 0 I 64 a score=64816.000000 s hg38.chr16_GL383557v1_alt 1162 17 + 89672 agagactgtagtttaat s panTro5.chr16 21427388 17 - 81586097 agagactgtagtttaat i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 726975 17 + 3010529 agagactgtagtttaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834486 17 + 163208435 agagactgtagtttaat i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20745782 17 + 43916225 agagactgtagtttaac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58182684 17 + 75399963 agagactgtagtttaac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6731936 17 - 7209941 agagactgtagtttaac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 472674 17 + 3907144 agagactgtagtttaac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21483442 17 - 44557958 agaaactgtagtttaat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6294520 17 + 6628207 agaaactggagtttaat i saiBol1.JH378225 C 0 C 0 e otoGar3.GL873566 13646876 64 + 13852661 I a score=46157.000000 s hg38.chr16_GL383557v1_alt 1179 15 + 89672 aatatcatactaatg s panTro5.chr16 21427405 15 - 81586097 aatatcatactaatg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 726992 15 + 3010529 aatatcatactaatg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834503 15 + 163208435 aataccatactaata i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20745799 15 + 43916225 aacatcatactaatg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58182701 15 + 75399963 aacatcatactaatg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6731953 15 - 7209941 aacatcatactaatg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 472691 15 + 3907144 aatatcatactaatg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21483459 15 - 44557958 aatatcacactaatg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6294537 6 + 6628207 aatatc--------- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13646940 15 + 13852661 aaaatagtTCCAATA i otoGar3.GL873566 I 64 C 0 a score=380590.000000 s hg38.chr16_GL383557v1_alt 1194 105 + 89672 ttggctgggtgtggtggctcatgcctga---aatcccagcgctttgagaggctgaggtaggtg----cattacctgaagtcagga----------------attggaaa---------------ccagcctggccaacatggc s panTro5.chr16 21427420 105 - 81586097 ttggctgggtgtggtggctcatgcctga---aatcccagcgctttgagaggctgaggtaggtg----cattatctgaagtcagga----------------attagaaa---------------ccagcctggccaacatggc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727007 105 + 3010529 ttggctgggtgtggtggctcacgcctga---aatcccagcgctttgagaggctgaggtaggtg----cattacctgaagtcagga----------------attggaaa---------------ccagcctggccaacatggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834518 105 + 163208435 ttggctggacgtggtggctcacgcctga---aatcccagcgctttgagaggctgaggtaggtg----gattacctgaggtcagga----------------gtttgaaa---------------ccagcctggccaacatggc i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21024346 136 - 78541002 ttagccgggcgaggtggcaggcgcctgt---agtcccagctactcgggaggctgaggcaggag----aatggcgtgaacccgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggtgacagaga i macFas5.chr20 N 0 C 0 s cerAty1.NW_011999143v1 20745814 105 + 43916225 ttggctgggcgtggtggctcacacctga---aatcccagcgctttgagaggctgaggtaggtt----gatcacctgaagtcagga----------------atttgaga---------------ccagcctggccaacagagc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58182716 105 + 75399963 ttggctgggcgtggtggctcacacctga---aatcccagcgctttgagaggctgaggtaggtt----gatcacctgaagtcagga----------------atttgaga---------------ccagcctggccaacagagc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6731968 104 - 7209941 ttggctgggcgtggtggctcacacctga---aatcccagcgctttgagaggctgaggtaggtt----gatcacttgaagtc-gga----------------atttgaga---------------ccagcctggccaacagagc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 472706 105 + 3907144 ttggctgagcgtggtggctcacacctga---aatcccagcgctttgagaggctgaggtaggtg----gatcacctgaagtcagga----------------gtttgaga---------------ccagcctggccaacatagc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21483474 104 - 44557958 ttggatgggcacagtgactcatccctga---aatcccagcactttgaaaagccgaggcaggtg----gatcacctgaggtcacga----------------gttcaaga---------------ccag-ctggccaacatggc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6294543 101 + 6628207 ----atgggcacagtgactcatccctga---aatcccagcactttgaaaggccaaggcaggag----gatcacctgaggtcagga----------------gttcgaga---------------ccagcctggccaacatggc i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13646955 108 + 13852661 ATGGTTACACAAGATG-TTAACATTAggctcagtgcctgtagctcaaggggttaaggtgccagccacaaatatcagagctggcgg----------------gttcaaat---------------ccagcctgg---gcctgcc i otoGar3.GL873566 C 0 C 0 a score=10941.000000 s hg38.chr16_GL383557v1_alt 1299 2 + 89672 ga s panTro5.chr16 21427525 2 - 81586097 ga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727112 2 + 3010529 ga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834623 2 + 163208435 aa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21313517 2 - 74971481 ga i rheMac8.chr20 N 0 C 0 s macFas5.chr20 21024482 2 - 78541002 ga i macFas5.chr20 C 0 I 30 s cerAty1.NW_011999143v1 20745919 2 + 43916225 ga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58182821 2 + 75399963 aa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732072 2 - 7209941 ga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 472811 2 + 3907144 ga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21483578 2 - 44557958 ga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6294644 2 + 6628207 ga i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13647063 2 + 13852661 aa i otoGar3.GL873566 C 0 C 0 a score=367013.000000 s hg38.chr16_GL383557v1_alt 1301 56 + 89672 --aaccttgactccactaaaaatacaaaaattagcc-aggcgtggtggctggggcgcct s panTro5.chr16 21427527 56 - 81586097 --aaccttgactccactaaaaatacaaaaattagcc-aggtgtggtggctggggcgcct i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727114 56 + 3010529 --aaccttgactccactaaaaattcaaaaattagcc-aggcgtggtggctggggcgcct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834625 56 + 163208435 --aaccctgactccactaaaaatacaaaaattagcc-aggcgtggtggctctggcgcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21313519 56 - 74971481 --aaccctgactccactaaaaatacaaaactcagcc-aggcatggtggcttgggcgcct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21024514 56 - 78541002 --aaccctgactccactaaaaatacaaaactcagcc-aggcatggtggcttgggcgcct i macFas5.chr20 I 30 C 0 s macNem1.NW_012011355v1 14418862 56 + 26466322 --aaccctgactccactaaaaatacaaaactcagcc-aggcatggtggcttgggcgcct i macNem1.NW_012011355v1 N 0 C 0 s cerAty1.NW_011999143v1 20745921 56 + 43916225 --aaccctgactccactaaaaatacaaaactcagcc-aggcatggtggcttgggcgcct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58182823 56 + 75399963 --aaccctgactccactaaaaatacaaaactcagcc-aggcatggtggcttgggcgcct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732074 56 - 7209941 --aaccctgactccactaaaaatacaaaactcagcc-aggcatggtggcttgggcgcct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 472813 57 + 3907144 --aaccctgactccactgaaaatacaaaactcagccaaggcatggtggcttgggcgcct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21483580 56 - 44557958 --aaccccgactccactaaaaatacaaaaattagcc-aggcatggtagttcagccacct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6294646 56 + 6628207 --aaccccgactccactaaaaatacaaaaattagcc-aggcatggtagttcaggcacct i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13647065 52 + 13852661 acaacaatga--caactacaa--ccaaaaaatagct-gagtgttgtggc--aggcgcct i otoGar3.GL873566 C 0 C 0 a score=2391442.000000 s hg38.chr16_GL383557v1_alt 1357 342 + 89672 gtaatctcagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccaagatcacacgactgcactccagcctgggcaacaagagcaaaac-tctgtatc--------------------aaaaaa-------------------------------aaaaaaaaa------aaa---ttcttagttttgataatggttatgcaagatgttaacattcggggaaactggaaactctgtattatttctataacttttaagtcta---------------------aaaGC--AAAAGAATTGTA----AGTAATAAGAACAAAACggctgggcgcagtggctcaca-----------agtacttcaggaggccgag-gcaggtggatcacctgaggttaggag-tttgagaccagcctg s panTro5.chr16 21427583 339 - 81586097 gtaatctcagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccaagatcacacgactgcactccagcctgggcaacaagagcaaaac-tctgtatc--------------------aaaaaa-------------------------------aaaaaaaaa------------ttcttagttttgataatggttatgcaagatgttaacattcggggaaactggaaactctgtattatttctataacttttaagtcta---------------------aaaGC--AAAAGAATTGTA----AGTAATAAGAACAAAACggctgggcgcagtggctcaca-----------agtacttcaggaggccgag-gcaggtggatcatctgaggttaggag-tttgagaccagcctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21494493 341 - 90481686 gtaatctcagctacttgggaggctgaggcaggagaatcgnttgaacccaggaggcagaggttgcagtgagccaagatcacacgactgcactccancctgggcaacaagagcaaactaactgtatc--------------------aaaaaa-------------------------------aaaaaaaaa--------a---ttcttagttttgataatggttatgcaagatgttaacattcggggaaactggaaactctgtattatttctataacttttaagtcta---------------------aaaGC--AAAAGAATTGTA----AGTAATAAGAACAAAACggctgggcgcagtggctcaca-----------agtacttcaggaggccgag-gcaggtggatcatctgaggttaggag-tttgagaccagcctg i panPan2.chr16 N 0 C 0 s gorGor5.CYUI01000018v1 727170 337 + 3010529 gtaatctcagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccaagatcacacgactgcactccagcctgggcaacaagagcaaaac-tctgtatc--------------------caaaaa-------------------------------aaaaaaa--------------ttcttagttttgataatggttatgcaagatgttaacattcggggaaattggaaactctgtattatttctataacttttaagtcta---------------------aaaGC--AAAAGAATTATA----AGTAATAAGAACAAAACggctgggcgcagtggctcaca-----------agtacttcaggaggccgag-gcaggtggatcacctgaggttaggag-tttgagaccagcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53834681 322 + 163208435 gtaatctcagctacttgggaggctgaggcaggagaattgcttgaacccaggaggcagaggctgcggtgatccaagatcgcatgattgcactccagcctgggcaacaagagcaaaac-tctgaatc--------------------aaaaaa-------------------------------aaaaaaaaa------aaaaacttcttagttttgataatgcttatgtaagatgttaacattaggggaaattggaaactctgtattatttctataacttttaagtctaaaattgcttc-----------aaaac--aaaaCAATTGTA----AGTAATAAGAACAAAACGGCTGGGCATggtggctcac---------------------------------------------ctgaggtcaggag-tttgagatcagcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21313575 352 - 74971481 gtaatctcagctactcgggaggctgaggcaggggaat-gtttgaatccaggaggcagaggttgcagtgagccaagatcacaggattgtactccagcctgggcaacaagagaaaaac-tctgtatc--------------------aagaag-------------------------------aaaaaaaaa------aaac--ttcttagatatgataatggttatgcaagatgttaacattaggggaaactggaaactctgtattatttctataacttttaagtctaaaattgtctc-----------aaaac--aaaGGAACTGTA----AGTAATAAGAACAAAACAgctgggcccagtggctcaca-----------agcactttaggaggccgag-gcggatggatcacctgaggtcaggag-tttgagaccagcctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21024570 352 - 78541002 gtaatctcagctactcgggaggctgaggcaggggaat-gtttgaatccaggaggcagaggttgcagtgagccaagatcacaggattgtactccagcctgggcaacaagagaaaaac-tctgtatc--------------------aagaag-------------------------------aaaaaaaaa------aagc--ttcttagatatgataatggttatgcaagatgttaacattaggggaaactggaaactctgtattatttctataacttttaagtctaaaattgtctc-----------aaaac--aaaGGAACTGTA----AGTAATAAGAACAAAACAgctgggcccagtggctcaca-----------agcactttaggaggccgag-gcggatggatcacctgaggtcaggag-tttgagaccagcctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14418918 352 + 26466322 gtaatctcagctactcgggaggctgaggcaggggaat-gtttgaatccaggaggcagaggttgcagtgagccaagatcacaggattgtactccagcctgggcaacaagagaaaaac-tctgtatc--------------------aagaag-------------------------------agaaaaaaa------aaac--ttcttagatatgataacggttatgcaagatgttaacattaggggaaactggaaactctgtattatttctataacttttaagtctaaaattgtctc-----------aaaac--aaaGGAACTGTA----AGTAATAAGAACAAAACAgctgggcccagtggctcaca-----------agcactttaggaggccgag-gcggatggatcacctgaggtcaggag-tttgagaccagcctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20745977 352 + 43916225 gtaatctcagctactcgggaggctgaggcaggggaat-gtttgaacccaggaggcagaggttgcagtgagccaagatcacaggattgtactccagcctgggcaacaagagaaaaac-tctgtatc--------------------aagaag-------------------------------aaaaaaaaa------aaac--ttcttagatttgataatggttatgcaagatgttaacattaggggaaactggaaactctgtattatttctataacttttaagtctaaaattgtctc-----------aaaac--aaaGGAACTGTA----AGTAATAAGAACAAAACAgctgggcccagtggctcaca-----------agcactttaggaggccgag-gcggatggatcacccgaggtcaggag-tttgagaccagcctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58182879 352 + 75399963 gtaatctcagctactcaggaggctgaggcaggggaat-gcttgaacccaggaggcagaggttgcagtgagccaagatcacaggattgtactccagcctgggcaacaagagaaaaac-tctgtatc--------------------aagaag-------------------------------gaaaaaaaa------aaac--ttcttagatttgataatggttatgcaagatgttaacattagaggaaactgggaactctgtattatttctataacttttaagtctaaaattgtctc-----------aaaac--aaaaGAACTGTA----AGTAATAAGAACAAAACAgctgggcccagtggctcaca-----------agcactttaggaggccgag-gcgggtggatcacctgaggtcaggag-tttgagaccagcctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732130 352 - 7209941 gtaatctcagctactcgggaggctgaggcaggggaat-gtttgaacccaggaggcagaggttgcagtgagccaagatcacaggattgtactccagcctgggcaacaagagaaaaac-tctgcatc--------------------aagaag-------------------------------aaaaaaaaa------aaac--ttcttagatttgataatggttatgcaagatgttaacattaggggaaactagaaactctgtattatttctataacttttaagtctaaaattgtctc-----------aaaac--aaaGGAACTGTA----AGTAATAAGAACAAAACAgctgggcccagtggctcaca-----------agcactttaggaggccgag-gcggatggatcacctgaggtcaggag-tttgagaccagcctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 472870 351 + 3907144 gtaatctcagctactctggaggctgaggcaggggaat-gcttgaacccaggaggcagaggttgcagtgagccaagatcacacgattgtactccagcctgggcaacaacagaaaaac-tctgtatc--------------------aagaag--------------------------------aaaaaaaa------aaac--ttcttagatttgataatggttatgcaggatgttaacattaggggaaactggaaactctgtattatttctataacttttaagtctaaagttgtctc-----------aaaac--aaaaGAACTGTA----AGTAATAAGAACAAAACggctgggcccggtggctcaca-----------agcactttaggaggctgag-gcaggtggatcacctgaagtcaggag-tttgagaccagcctg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21483636 403 - 44557958 gtaatcacagctactctggaggctgaagcaggaaaatcacttaaacccaggaggcagaggttgcagtgaactgagattgcaccattgcactccagcctgagcaacatgaacaaaac-tccgtatc--------------------aaaaaataaataaatactaatgttaacaacttacttaaaaaaaaaagttgaaaaac--ttcttagttttgataatggttatgcaagacgttaacattagaagatattggaaattccgtattatttctgtaacttttaagtctaaaattgtttc-----------aaaac-aaaaaAAATTGTA----AGTAATAAAAACAAAATggttgggtgcgctggctcacacctgtaatcccagcactttgggaggacaaa-gcaggtgaatcacctgaagtcaggagttttgagaccagccta i calJac3.chr20 C 0 I 46 s saiBol1.JH378225 6294702 420 + 6628207 ttaatcccagctactctggaggatgaagcaggaaaatcacttgaacccaggaggcagaggctgcagtgagctgagattgtaccattgcactccatcctgggcaacaagaacaaaac-tccgtAGCaataaataaataaataaataaataaataaataaatactaatgttaacgtcttacttaaaaaaaaaagtttaaaaac--ttcttagttttgataacggttatgcaagatgttaacattagaagaaactggaaactcagtattatttatgtaacttttaagtctaaaattgtttc-----------aaaacaaaaaAAAATTGTA----AGTAATAAAAACAAAATggttgggcgcagtggctcacacctgtaatcctagcactttgggaggccaaa-gcgggtggatcacctgaagtcaggag-tttgagaccagc--- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13647117 287 + 13852661 atagtcccatctacttgggaggctaaggcaagagaatcgcttacgcccaggagttggaggttgctgtgagttgtgatgccaca---gcactctacccagggcaac---agcttgag-tctctgtc--------------------taaaaa----------------------------------------------------------------------------------------aTTAGAGGAAATTGTAAACT--GCATAATTTCTGTAACTTTTAAGTTTAGAAttctttcttttttttttttaaga--gacagagtctcactttgttgctctcagtagagtgctgtggcaccacagctcaca-----------gcaacctctagctgctgggcttaggtgattctcttg-------------------------- i otoGar3.GL873566 C 0 C 0 a score=141048.000000 s hg38.chr16_GL383557v1_alt 1699 28 + 89672 gccactgtggtgaaacctca---tctctact s panTro5.chr16 21427922 28 - 81586097 gccactgtggtgaaacctca---tctctact i panTro5.chr16 C 0 C 0 s panPan2.chr16 21494834 28 - 90481686 gccactgtggtgaaacctca---tctctact i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727507 28 + 3010529 gccaatgtggtgaaacccca---tctctact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835003 28 + 163208435 gccaacatggtgaaacccca---tctctact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21313927 28 - 74971481 gccaacatggtgaaacccca---tctctact i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21024922 28 - 78541002 gccaacatggtgaaacccca---tctctact i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419270 28 + 26466322 gccaacatggtgaaacccca---tctctact i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746329 28 + 43916225 gccaacatggtgaaacccca---tctctact i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183231 28 + 75399963 gccaacatggtgaaacccca---tctctact i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732482 28 - 7209941 gccaacatggtgaaacccca---tctctact i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473221 28 + 3907144 gccaacatggtgaaacccca---tctctact i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6295122 5 + 6628207 --------------------------ctact i saiBol1.JH378225 C 0 I 40 s otoGar3.GL873566 13647404 12 + 13852661 ---------------cctcagactccc---- i otoGar3.GL873566 C 0 C 0 e calJac3.chr20 21484039 46 - 44557958 I a score=1055270.000000 s hg38.chr16_GL383557v1_alt 1727 161 + 89672 aaaaat-aaaaaaaaattagctgggcatgg-tggcatgtgccagtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggagg-cagaggttgcagtgagc---caagttcgcaccactgcactccag--cctgggcaacaagagcaaaaactcc s panTro5.chr16 21427950 161 - 81586097 aaaaat-aaaaaaaaattagctgggcatgg-tggcatgtgccagtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggagg-cagaggttgcagtgagc---caagttcgcaccactgcactccag--cctgggcaacaagagcaaaaactcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21494862 160 - 90481686 aaaaat--aaaaaaaattagctgggcatgg-tggcatgtgccagtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggagg-cagaggttgcagtgagc---caagttcgcaccactgcactccag--cctgggcaacaagagcaaaaactcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727535 161 + 3010529 aaaact-aaaaaaaaattagctgggcatgg-tggcatgtgccagtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggagg-cagaggttgcagtgagc---caagttcgcaccactgcactccag--cctgggcaacaagagcaaaaactcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835031 159 + 163208435 aaaaat--taaaaaaattagctgggtgtgg-tggcatgtgccagtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggagg-cggaagttgtagtgagc---caagatcacaccactgcactccag--cctgggcaacaagagcgaaaact-c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21313955 159 - 74971481 aaaaat--ttgaaaaattagctgggcatgg-tgacgtgtgccagtaatctcagctactaaggaggctgaggcaggagtcttgcttgaacctgggact-caaaggtggcagtgagc---caaaatgccaccactgcgctccag--cctgggcaacaagagcgaaaact-c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21024950 159 - 78541002 aaaaat--ttgaaaaattagctgggcatgg-tgacgtgtgccagtaatctcagctactaaggaggctgaggcaggagtcttgcttgaacctgggacg-cagaggttgcagtgagc---cgagatcgcaccactgcgctccag--cctgggcaacaagagcgaaaact-c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419298 159 + 26466322 aaaaat--ttgaaaaattagctgggcatgg-tgacgtgtgccagtaatctcagctactaaggaggctgaggcaggagtcttgcttgaacctgggacg-cagaggttgcagtgagc---cgagatcgcaccactgcgctccag--cctgggcaacaagagcgaaaact-c i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746357 159 + 43916225 aaaaat--ttgaaaaattagctgggcatgg-tgacgtgtgccagtaatcccagctactcaggaggctgaggcaggagtcttgcttgaacctgggacg-cagaggttgcagtgagc---tgaaatcacaccactgcgctccag--cctgggcaacaagagcgaaaact-c i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183259 159 + 75399963 aaaaat--ttgaaaaattagctgggcatgg-tgacgtgtgccagtaatcccagctactcaggaggctgaggcaggagtcttgcttgaacctgggagg-cagaggttgcagtgagc---cgagatcgcaccactgcgctccag--cctgggcaacaagagtgaaaact-c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732510 159 - 7209941 aaaaat--ttgaaaaattagctgggcatgg-tgacgtgtgccagtaatcccagctactcaggaggctgaggcaggagtcttgcttgaacctgggacg-cagaggttgcagtgagc---cgagatcacaccactgcgctccag--cctgggcaacaagagcgaaaact-c i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473249 159 + 3907144 aaaaat--ttgaaaaattagctgggcgtgg-tgacgtgtgctagtaatcccagctactcaggaggccgaggcaggagtattgcttgatcctgggagg-cagaggttgcagtgagc---cgatatcgcactactgcactccag--cctgggcaacaagagcgaaaact-c i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484085 166 - 44557958 aaaaattttttaaaaattagctgggggtggttggcatgtgccagtaatctcatctgcttgtgaagctgaggcaggagaatcacttgaactggagaagttggaggtagcaatgagc---tgagactgcaccactgcactccagcacctcggtaacaagtgtaaaaacttc i calJac3.chr20 I 46 C 0 s saiBol1.JH378225 6295167 164 + 6628207 aaagattttaaaaaaattagctgggcgtgg-tggcatgtgccagtaatctcagctacttgggaagcggaggcaggagaatcacttgaactggagaag-cggaagttgcaatgagc---tgagactgcaccactgcactccagcacctgggtaacaagagcaaaaacttc i saiBol1.JH378225 I 40 I 140 s otoGar3.GL873566 13647416 135 + 13852661 --------------aagtagctgggactac-aggcgtctgccacaacacctggctattt-------ttttgttgcagtttggccagggccgaattca-aacgcgctgcctttggtatatgggctggcacc------ctactc--actgagccacaggtgccacccA--- i otoGar3.GL873566 C 0 C 0 a score=22775.000000 s hg38.chr16_GL383557v1_alt 1888 8 + 89672 catctcag s panTro5.chr16 21428111 8 - 81586097 catctcag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495022 8 - 90481686 catctcag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727696 8 + 3010529 catctcag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835190 8 + 163208435 cgtctcag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314114 6 - 74971481 catctc-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025109 6 - 78541002 catctc-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419457 6 + 26466322 catctc-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746516 6 + 43916225 catctc-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183418 8 + 75399963 catctcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732669 6 - 7209941 catctc-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473408 8 + 3907144 catctcag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484251 7 - 44557958 -accaaaa i calJac3.chr20 C 0 I 74 s otoGar3.GL873566 13647551 8 + 13852661 TATTTCAA i otoGar3.GL873566 C 0 C 0 e saiBol1.JH378225 6295331 140 + 6628207 I a score=37252.000000 s hg38.chr16_GL383557v1_alt 1896 18 + 89672 aaaaaa------agaaaagaaaat- s panTro5.chr16 21428119 18 - 81586097 aaaaaa------agaaaagaaaat- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495030 17 - 90481686 aaaaaa------ag-aaagaaaat- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727704 18 + 3010529 aaaaaa------agaaaagaaaat- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835198 18 + 163208435 aaaaaa------agaaaagaaaag- i nomLeu3.chr2 C 0 I 1 s rheMac8.chr20 21314120 11 - 74971481 ------------agaaaag-aaaG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025115 11 - 78541002 ------------agaaaag-aaaG- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419463 11 + 26466322 ------------agaaaag-aaaG- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746522 11 + 43916225 ------------agaaaag-aaaG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183426 23 + 75399963 aaaaaaaagaaaagaaaag-aaaG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732675 11 - 7209941 ------------agaaaag-aaaG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473416 20 + 3907144 aaaaaaaa----agaaaagaaaag- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484332 13 - 44557958 -----a------ggaaaagaaaag- i calJac3.chr20 I 74 I 2 s saiBol1.JH378225 6295471 13 + 6628207 -----a------ggaaaagaaaag- i saiBol1.JH378225 I 140 I 2 s otoGar3.GL873566 13647559 23 + 13852661 -AACAATTTTT-AGTAAGAAAAAAC i otoGar3.GL873566 C 0 C 0 a score=702780.000000 s hg38.chr16_GL383557v1_alt 1914 90 + 89672 aacaaaTCACAGAAAATCTGGAAAAG--AGATAAAATAGTCATCTTTATTACTAATAAA--ACGT--ATCTTTCCTTCTAGTCTTTTTGTCTATG-T s panTro5.chr16 21428137 90 - 81586097 aacaaaTCACAGAAAATCTGGAAAAG--AGATAAAATAGTCATCTTTATTACTAATAAA--ACGT--ATCTTTCCTTCTAGTCTTTTTGTCTATG-T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495047 90 - 90481686 aacaaaTCACAGAAAATCTGGAAAAG--AGATAAAATAGTCATCTTTATTACTAATAAA--ACGT--ATCTTTCCTTCTAGTCTTTTTGTCTATG-T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727722 89 + 3010529 aacaaaTCACAGAAAATCTGGAAAAG--AGATAAAATAGTCATCTTTATTACTAATAAA--ACGT--ATC-TTCCTTCTAGTCTTTTTGTCTATG-T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835217 89 + 163208435 aaaaaaTCACAGAAAATCTGGAAAAG--AGATAAAATAATCATCTTTATTGCCAATAAA--ACGT--ATCTTTCCTTCTAGTC-TTTTGTCTATG-T i nomLeu3.chr2 I 1 C 0 s rheMac8.chr20 21314131 88 - 74971481 AGCAAATCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCTAGTCTTTTTGCCTATG-T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025126 88 - 78541002 AGCAAATCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCTAGTCTTTTTGCCTATG-T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419474 88 + 26466322 AGTAAATCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCCAGTCTTTTTGTCTATG-T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746533 88 + 43916225 AGCAAATCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCTAGTCTTTTTGTCTATG-T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183449 88 + 75399963 AGCAAATCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCTAGTCTTTTTGTCTATG-T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732686 88 - 7209941 AGCAAATCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCTAGTCTTTTTGTCTATG-T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473436 88 + 3907144 aaagaaTCACAGAAAATCTGGAAAAG--AG--AAAATAATCACCTTTATTACCAATAAA--ATGT--ATCTTTCTTTCTAGTCTTTTTGTCTATG-T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484347 93 - 44557958 aacaaaTCACAGAAAATCTGGAAAACAGAG--AAAATAGTTACCTTTACTACCAATGAAACACGTGGATCGTTCCTTCTAGTCTTTTTGTCCATG-- i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6295486 91 + 6628207 AACAAATCACAGAAAATCTGGAAAACAAAG--AAAACAGTCACCTTTACTACCAATGAA--ACGTGGATAATTCCTTCTAGTCTTTTTGTCTATG-- i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3270894 92 - 5917169 aacaaatcacagaaaatctggaaaac--ag--aaaatagTCACCTTTACTATCAATGAAACACGTGGATTGTTCCTTCTAGTCTTTTTGTCTATGT- i cebCap1.NW_016107433v1 N 0 I 140 s otoGar3.GL873566 13647582 74 + 13852661 ---------CAGAAAATCTGAGAAAG------AAAATAGTCACCTTTAATTCCAATAAA--TCAT--GTGTGTCCTACTAGT-TTTTTCTTTAC--- i otoGar3.GL873566 C 0 C 0 a score=358561.000000 s hg38.chr16_GL383557v1_alt 2004 65 + 89672 AT-TTTGTGTCTAGGCATTTTAATAGCTATAATCATAC-----ATAGAATTTT-TATCTTGCTTTTTAACAC s panTro5.chr16 21428227 65 - 81586097 AT-TTTGCGTCTAGGCATTTTAATAGCTATAATCATAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495137 65 - 90481686 AT-TTTGCGTCTAGGCATTTTAATAGCTATAATCATAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727811 65 + 3010529 AT-TTTTTGTCTAGGCATTTTAATAGCTATAATCATAC-----ATACAATTTT-TATCTTGCTTTTTAACAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835306 66 + 163208435 CTCTTTTTGTCTAGGTATTTTAATAGCTATAATCATAC-----ACAGAATTTT-TATCTTGCTTTTTAACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314219 65 - 74971481 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCACAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i rheMac8.chr20 C 0 I 27 s macFas5.chr20 21025214 65 - 78541002 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCACAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i macFas5.chr20 C 0 I 12 s macNem1.NW_012011355v1 14419562 65 + 26466322 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCACAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i macNem1.NW_012011355v1 C 0 I 12 s cerAty1.NW_011999143v1 20746621 65 + 43916225 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCACAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i cerAty1.NW_011999143v1 C 0 I 12 s chlSab2.chr5 58183537 65 + 75399963 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCATAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i chlSab2.chr5 C 0 I 12 s manLeu1.NW_012101698v1 6732774 65 - 7209941 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCACAC-----ATAGAATTTT-TATCTTGCTTTTTAACAA i manLeu1.NW_012101698v1 C 0 I 12 s colAng1.NW_012123265v1 473524 65 + 3907144 AT-TTTTTGTCTAGGTAATTTAATAGCTATAATCATAC-----ATAGAATTTT-TATCTTGTTTTTTAATAA i colAng1.NW_012123265v1 C 0 I 12 s calJac3.chr20 21484440 22 - 44557958 -------------------------------------------------TTTT-TATCTTGCTTTTAAACAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6295577 22 + 6628207 -------------------------------------------------ATTT-TATCTTGCTTTTAAACAA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13647656 62 + 13852661 ---------TCTATGTATTTGAACTGCTATAATAATACTGTATATAGAATTTTATGTATTACTTTAAAAAA- i otoGar3.GL873566 C 0 C 0 e cebCap1.NW_016107433v1 3270986 140 - 5917169 I a score=53717.000000 s hg38.chr16_GL383557v1_alt 2069 10 + 89672 ATCTTAT------AAA s panTro5.chr16 21428292 10 - 81586097 ATCTTAT------AAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495202 9 - 90481686 ATCTTAT-------AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727876 10 + 3010529 ATCTTAT------AAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835372 10 + 163208435 ATCTTAT------AAA i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21025291 10 - 78541002 ATCCTAT------AAA i macFas5.chr20 I 12 C 0 s macNem1.NW_012011355v1 14419639 10 + 26466322 ATCCTAT------AAA i macNem1.NW_012011355v1 I 12 C 0 s cerAty1.NW_011999143v1 20746698 10 + 43916225 ATCCTAT------AAA i cerAty1.NW_011999143v1 I 12 C 0 s chlSab2.chr5 58183614 16 + 75399963 ATCTTATTTTAAAAAA i chlSab2.chr5 I 12 C 0 s manLeu1.NW_012101698v1 6732851 10 - 7209941 ATCCTAT------AAA i manLeu1.NW_012101698v1 I 12 C 0 s colAng1.NW_012123265v1 473601 10 + 3907144 ATCTTAT------AAA i colAng1.NW_012123265v1 I 12 C 0 s calJac3.chr20 21484462 10 - 44557958 ATCTTAC------AAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6295599 10 + 6628207 ACCTTAA------TAA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13647718 10 + 13852661 ATCTTAT------ATA i otoGar3.GL873566 C 0 I 286 e cebCap1.NW_016107433v1 3270986 140 - 5917169 I e rheMac8.chr20 21314284 27 - 74971481 I a score=5224.000000 s hg38.chr16_GL383557v1_alt 2079 4 + 89672 ATCt s panTro5.chr16 21428302 4 - 81586097 ATCt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495211 4 - 90481686 ATCt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727886 4 + 3010529 ATCt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835382 4 + 163208435 ATCt i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21025301 4 - 78541002 AAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419649 4 + 26466322 AAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746708 4 + 43916225 Attt i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58183630 4 + 75399963 AAtt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732861 4 - 7209941 AAtt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473611 4 + 3907144 Attt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484472 4 - 44557958 TTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6295609 4 + 6628207 ATTT i saiBol1.JH378225 C 0 C 0 e cebCap1.NW_016107433v1 3270986 140 - 5917169 I e rheMac8.chr20 21314284 27 - 74971481 I e otoGar3.GL873566 13647728 286 + 13852661 I a score=178535.000000 s hg38.chr16_GL383557v1_alt 2083 46 + 89672 ttttttttttt--------tttt--------------------------------------------------------------------------------gagatgaagtctcactctgtggcctgggctg s panTro5.chr16 21428306 47 - 81586097 ttttttttttt--------tttt-------------------------------------------------------------------------------tgagacgaagtctcactctgtggcctgggctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495215 46 - 90481686 ttttttttttt--------tttt--------------------------------------------------------------------------------gagacgaagtctcactctgtggcctgggctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727890 53 + 3010529 ttttttttttt--------tttt----------------------------------tttttt---------------------------------------tgagacgaagtctcactctgtggcctgggctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835386 44 + 163208435 tttttttgttg--------tttt----------------------------------------------------------------------------------gacagagtcttgctctgtggcctgggctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314311 44 - 74971481 ttttttttttt--------tttt--------------------------------------------------------------------------------gagac--agtctcactctgtggcccgagctg i rheMac8.chr20 I 27 C 0 s macFas5.chr20 21025305 46 - 78541002 ttttttttttt--------tttt--------------------------------------------------------------------------------gagacagagtctcactctgtggcccgagctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419653 46 + 26466322 ttttttttttt--------tttt--------------------------------------------------------------------------------gagacagagtctcactctgtggcccgagctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746713 46 + 43916225 ttttttttttt--------tttt--------------------------------------------------------------------------------gagacagagtcccactctgtggcccaagctg i cerAty1.NW_011999143v1 I 1 C 0 s chlSab2.chr5 58183634 41 + 75399963 tttttt-------------tttt--------------------------------------------------------------------------------gagacagagtctcactctgtggcccgagctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732865 52 - 7209941 ttttttttttttttttg--tttt--------------------------------------------------------------------------------gagacagagtctcactctgtggcccgagctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473615 54 + 3907144 ttttttgttttgttttgtttttt--------------------------------------------------------------------------------gagacagaatcttgctctgtggcccgagctg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484476 58 - 44557958 ----TTTTTTGAGATGGAGTCTCGGGAA----------------------------------------------------------------AAAAAAGAAAAgagatggagtctcgctccgtggc-------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6295613 122 + 6628207 ----TTTTTTTAGATGGAGTCTCGGaaaaaaaaaaagaaagaaaaaagaaataaaaTTTGTTTCCTATGATCCATGTTAGAGGAAAAAAAAGAAAAGAAAAAAgagatggagtctcactctgtggc-------- i saiBol1.JH378225 C 0 C 0 e cebCap1.NW_016107433v1 3270986 140 - 5917169 I e otoGar3.GL873566 13647728 286 + 13852661 I a score=2077846.000000 s hg38.chr16_GL383557v1_alt 2129 239 + 89672 gagtgcagtggcatgatctcagcttactgcaacctccacctcccaggttcaagtgattctcctacctctgcttcccaagtagctgggattacaggcacacaccaccacgcccaaccaatttttgtatttttagtagagacggggtttcaccatgttggccagg-ctgatgtcgaatgcctgacctcagatgatctacccaccttggcctccctaagtgatggaattccaggcatgagtca s panTro5.chr16 21428353 239 - 81586097 gagtgcagtggcatgatctcagcttactgcaacctccacctcccaggttcaagtgattctcctacctctgcttcccaagtagctgggattacaggcacacaccaccacgcccaaccaatttttgtatttttagtagagacggggtttcaccatgttggccagg-ctgatctcgaatgcctgacctcaggtgatctacccaccttggcctccctaagtgatggaattccaggcatgagtca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495261 239 - 90481686 gagtgcagtggcatgatctcagcttactgcaacctccacctcccaggttcaagtgattctcctacctctgcttcccaagtagctgggattacaggcacacaccaccacgcccaaccaatttttgtatttttagtagagacggggtttcaccatgttggccagg-ctgatctcgaatgcctgacctcaggtgatctacccaccttggcctccctaagtgatggaattccaggcatgagtca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 727943 239 + 3010529 gagtgcagtggcatgatctcagcttactgcaacctccacctcccaggttcaagtgattctcctacctctgcttcccaagtagctgggattacaggcacacaccaccacgcccaaccaatttttgtatttttagtagaga-ggggtttcaccatgttggccaggcctggtctcgaatgcctgacctcaggtgatctacccaccttggcctccctaagtgatggaattccaggcatgagtca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835430 239 + 163208435 gagtgcagcggcatgatctcggcttactgcaacctacacctcccaggttcaagtgattctcctacctctgcttcccgagtagctgggattacaggcacacaccaccatgcccaaccaatttttgtatttttagtagacacggggtttcaccatgttggccagg-ctggtctcgaacgcctgacctcaggtgatctacccaccttggcctccctaagtggtggaattccaggcatgagcca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314355 239 - 74971481 gagtgcagtggcatgatctcagcttactgcaacctccacctctcaggttcaagcgattctcctacctctgcttcctgagtagctgggattacaggtgcacaccaccacgcccacccaatctttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacctcaggtgatctaccaacctcagcctctctaaatggtggaattacaggtgtaagcca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025351 239 - 78541002 gagtgcagtggcatgatctcagcttactgcaacctccacctctcaggttcaagcgattctcctacctctgcttcctgagtagctgggattacaggtgcacaccaccacgcccacccaatctttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacctcaggtgatctaccaacctcagcctctctaaatggtggaattacaggtgtaagcca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419699 239 + 26466322 gagtgcagtggcatgatctcagcttactgcaacctccacctctcaggttcaagcgattctcctacctctgcttcctgagtagctgggattacaggtgcacaccaccacgcccacccaatctttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacatcaggtgatctaccaacctcagcctctctaaatggtggaattacaggtgtaagcca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746759 239 + 43916225 gagtgcagtggcatgatctcagcttactgcaacctccacctctcaggttcaagcgattctcctacctctgcttcctgagtagctgggattacaggtgcacaccaccacgcccacccaatctttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacctcaggtgatctaccaacctcagcctctctaaatggtggaattacaggtgtaagcca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183675 239 + 75399963 gagtgcagtggcatgatctcagcttactgcaacctccacctctcaggttcaagcgattctcctacctctgcttcctgagtagctgggattataggtgcacaccaccacgtccacccaatttttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacctcaggtgatctaccaaccttggcctctctaaatggtggaattacaggtgtaagcca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6732917 239 - 7209941 gagtgcagtggcatgatctcagcttactgcaacctccacctctcaggttcaagcgattctcctacctctgcttcctgagtagctgggattacaggtgcacaccaccacgcccacccaatctttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacctcaggtgacctaccaacctcagcctctctaaatggtggaattacaggtgtaagcca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473669 239 + 3907144 gagtgcagtggcatgatctcggcttactgcaacctccacctctcaggttcaagcaattctcctacctctgcttcctgagtagctaggattacaggtgcacaccaccacacccacccaatttttgtatttttagtagagatggggtttcaccatgttggccagg-ctggtctcgaatgcctgacctcaggtgatctaccaaccttggcctctctaaatggtggaattacaggtgtgagcca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484534 235 - 44557958 gagtgcagtagcatgatctcagcttactgcaacctctgcctcctgggttcaagcgattctcctacctcagcctcctgagtagctgggattacaggcagatgccaccatac----ctaattttggtatttttagtagagacagggtttcaccatgttggccagg-ctggtcttgaatgcctgacctcaggtgatctacccacctcggcctccctaagtggtggaattaaaggcgtgagcaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6295735 239 + 6628207 gagtgcagtggcacgatctcaacttactgcaacctctgcctcctgggttcaagtgattctcctacctcagcctcctgagtagccgggattacaggcagatgccaccatgcccaactaattttggtatttttagtagagatggggtttcaccatgttggccagg-ctggtcttgaatgcctgaccccagttgatctacccacctcggcctccctaagtggtggaattacaggcgtgagcaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271126 237 - 5917169 gagtgcagtggcatgatctcagcttactgcgac--ctgtctcctgggttcaagtgattctcctacctcagcctcctgagtagccgggattaccggcagacgccaccatgcccaactaattttggtatttttagtagagacggggtttcaccatgttggccagg-ctggtcttgaacacctgaccccaggtgatctacccacctcggcctccctaagtggtggaattacaggcgtgagcaa i cebCap1.NW_016107433v1 I 140 C 0 e otoGar3.GL873566 13647728 286 + 13852661 I a score=551684.000000 s hg38.chr16_GL383557v1_alt 2368 59 + 89672 ccgcaccaggcTGGTAGCCTTTTAAATATTACTTGATTGTGCTTTGTAAAAGCTATACT s panTro5.chr16 21428592 59 - 81586097 ccgcaccaggcTGGTAGCCTTTTAAATATTACTTGATTGTGCTTTGTAAAAGCTATACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495500 59 - 90481686 ccgcaccaggcTGGTAGCCTTTTAAATATTACTTGATTGTGCTTTGTAAAAGCTATACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 728182 58 + 3010529 ccgcaccaggcTGGCAGCCTTTTAAATATTACTTGATTGTGCTTTGT-AAAGCTATACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835669 59 + 163208435 ccacacctggcTGATAGCCTTTTAACTATTACTTGATTGTGCTTTGTAAAAGCTATATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314594 59 - 74971481 ccacacctggcTGACAGCCTTTTAAATACTACTTGATTGTGCTTTGTAAAAGCTATATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025590 59 - 78541002 ccacacctggcTGACAGCCTTTTAAATACTACTTGATTGTGCTTTGTAAAAGCTATATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419938 59 + 26466322 ccacacctggcTGACAGCCTTTTAAATACTACTTGATTGTGCTTTGTAAAAGCTATATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20746998 59 + 43916225 ccacacctggcTGACAGCCTTTTAAATACTACTTGATTGTGCTTTGTAAAAGCTATATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183914 59 + 75399963 ccacacctggcTGATAGCCTTTTAAATACTACTTGATTGTGCTTTGTAAAAGCTATATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6733156 59 - 7209941 ccacacctggcTGACAGCCTTTTAAATACTACTTGATTGTGCTTTGTAAAAGCTATATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473908 59 + 3907144 ccacacctggcTGACAGCCTTTTAAATACTACTTGATTGCGCTTTGTAAAAGCTATATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484769 59 - 44557958 cctcgcctggcTGATAGCCTGTTAAATATTACTTGATTGTACTTTGTAAAAGCTATATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6295974 59 + 6628207 ccgcgcctggcTGGTAGCCTTTTAAATATTACTTGATTGTACTTTGTAAAAGCTATATG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271363 59 - 5917169 ccgcgcctggcTGATAGCCTTTTAAATATTACTTGATTGTACTTTGTAAAAGCTATATG i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13648014 59 + 13852661 CTTATACAATCTGATAGCCTTTTGAGTATTACTTTATTATTCTTTGTAAAAGCTGTATT i otoGar3.GL873566 I 286 C 0 a score=886923.000000 s hg38.chr16_GL383557v1_alt 2427 91 + 89672 TATCATTTAAAAGACAAATATTAAAAAATTTACAGTTGATATTTTTTATGTTGTACGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT s panTro5.chr16 21428651 91 - 81586097 TATCATTTAAAAGACAAATATTTAAAAATTTACAGTTGATATTTTTTATGTTGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495559 91 - 90481686 TATCATTTAAAAGACAAATATTTAAAAATTTACAGTTGATATTTTTTATGTTGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 728240 91 + 3010529 TATCATTTAAAAGACAAATATTAAAAAATTTACAGTTGATATTTTTTATGTTGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835728 91 + 163208435 TATCATTTAAAAGATAAACATTAAAAAATTTACAGTTGGTATTTTTTATGTTGTATGTCACAGAAAAGCAGAAATAATAGAAAATAACTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314653 88 - 74971481 TATCATTTAAAAGATAAACATTAAAAAATTTACAGTTGATATTTTTTA---TGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025649 88 - 78541002 TATCATTTAAAAGATAAACATTAAAAAATTTACAGTTGATATTTTTTA---TGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14419997 88 + 26466322 TATCATTTAAAAGATAAACATTAAAAAATTTACAGTTGATATTTTTTA---TGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747057 88 + 43916225 TATCATCTAAAAGATAAACATTAAAAAATTTACAGTTGATATTTTTTA---TGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58183973 74 + 75399963 TATCAT--------------TTAAAAAATTTACAGTTGATATTTTTTA---TGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6733215 88 - 7209941 TATCATTTAAAAGATAAACATTAAAAAATTTACAGTTGATATTTTTTA---TGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 473967 91 + 3907144 TATCATTTAAAAGATAAACATTAAAAAATTTACAGTTGATATTTTTTATGTTGTATGTCAAGGAAAAGCAGAAATAATAGAAAATAACTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21484828 91 - 44557958 TATCATTTAAAAGAGAAGCATTACATAATTTACAGCTGATATTTTTTATATTTTATGTCAAGAAAAAGCAGAAGTAATAAAAAATAACTAT i calJac3.chr20 C 0 I 761 s saiBol1.JH378225 6296033 91 + 6628207 TATCATTTAAAAGAGAAGCATTACATAATTTACAGCTGATATTTTTTATACTGTATATCAAGAAAAAGCAGAAGTAATAGAAAATAACTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271422 91 - 5917169 TATCATTTAAAAGAGAAGCATTACATAATTTATAGCGGATATTTTTTATACTGTATATCAAGAAAAAGCAAAAATAATAGAAAATAACTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9237359 91 - 10531588 TATCATTTAAAAGAGAAGCATTACACAATTTACAGCTGATATTTTTTATATTGTATATCAAGACAAAGCAGAAATAATAGAAAATAACTAT i aotNan1.NW_018500622v1 N 0 C 0 s otoGar3.GL873566 13648073 83 + 13852661 ----ACTAAAAAGGGGAATATTACATGATTTATAGCT----TTATAAATATTGTATATCAAGAAAAAGCAGAAAGAGTAGAAAATAACCAT i otoGar3.GL873566 C 0 C 0 a score=76833.000000 s hg38.chr16_GL383557v1_alt 2518 9 + 89672 TGCAAGGAA s panTro5.chr16 21428742 9 - 81586097 TGCAAGGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495650 9 - 90481686 TGCAAGGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 728331 9 + 3010529 TGCAAGGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835819 9 + 163208435 TGCGAAGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314741 9 - 74971481 TGCAAAGAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025737 9 - 78541002 TGCAAAGAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14420085 9 + 26466322 TGCAAAGAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747145 9 + 43916225 TGCAAAGAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58184047 9 + 75399963 TGCAAAGAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6733303 9 - 7209941 TGCAAAGAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 474058 9 + 3907144 TGCAAAGAA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6296124 9 + 6628207 TCCAAAGAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271513 9 - 5917169 TCCAAAGAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9237450 9 - 10531588 TCCACAGAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13648156 9 + 13852661 TGCAAACAA i otoGar3.GL873566 C 0 I 376 e calJac3.chr20 21484919 761 - 44557958 I a score=206389.000000 s hg38.chr16_GL383557v1_alt 2527 25 + 89672 CTTGCGGTATGAGATAATTAATTTA s panTro5.chr16 21428751 25 - 81586097 CTTGCGGTATGAGATAATTAATTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495659 25 - 90481686 CTTGCGGTATGAGATAATTAATTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 728340 25 + 3010529 CTTGCGGTATGAGATAATTAATTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835828 25 + 163208435 CTTGCAGTATGAGATAATTAATTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314750 25 - 74971481 CTTGCAGTATAAGATAATTAATATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025746 25 - 78541002 CTTGCAGTATAAGATAATTAATATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14420094 25 + 26466322 CTTGCAGTATAAGATAATTAATATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747154 25 + 43916225 CTTGCAGTATAAGATAATTAATATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58184056 25 + 75399963 CTTGCAGTATAAAATAATTAATATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6733312 25 - 7209941 CTTGCAGTATAAGATAATTAATATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 474067 25 + 3907144 CTTGCAGTATAAGATAATTAATATA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6296133 25 + 6628207 CTTGCAGCATAAGATAATTAATTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271522 25 - 5917169 CTTGCAGCATAAGATAATTAATTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9237459 25 - 10531588 CTTGCAGCATAAGATAATTAATTTT i aotNan1.NW_018500622v1 C 0 C 0 e calJac3.chr20 21484919 761 - 44557958 I e otoGar3.GL873566 13648165 376 + 13852661 I a score=731940.000000 s hg38.chr16_GL383557v1_alt 2552 82 + 89672 AAACGATGCCATAAATAATTGTGATTTAAAAACCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGATCTTTTGGAAGTTTTAA s panTro5.chr16 21428776 82 - 81586097 AAACGATGCCATAAATAATTGTGATTTAAAAACCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGATCTTTTGGAAGTTTTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495684 82 - 90481686 AAACGATGCCATAAATAATTGTGATTTAAAAACCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGATCTTTTGGAAGTTTTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 728365 79 + 3010529 AAACGATGCCATAAA----TGTGATTTAAAAACCAGTTTGCTTTAACTGGACTATCTAGAAAAAGATCTTTTGGAAGTTTTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835853 82 + 163208435 AAACGATGCCATAAATAACTATGATTTAAAAACCAGTTTGCTTT-TCTGAACTATCTAGGAAAAGATCTTTTGGAAGTTTTAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314775 81 - 74971481 AAACGATGCCATAAATAACTGTGATTT-AAAATCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025771 81 - 78541002 AAACGATGCCATAAATAACTGTGATTT-AAAATCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14420119 81 + 26466322 AAACGATGCCATAAATAACTGTGATTT-AAAATCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747179 81 + 43916225 AAACGATGCCATAAATAACTGTGATTT-AAAATCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58184081 80 + 75399963 AAATGATGCCATAAATAACTGTGATTT-AAAATCAGTTTGC-TT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6733337 81 - 7209941 AAATGATGCCATAAATAACTGTGATTT-AAAATCAGTTTGCTTT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 474092 81 + 3907144 AAACGATGCCATAAATAACTGTGATTT-AAAACCAGTTTGTTTT-TCTGGACTATCTAGGAAAAGAACTTTTGGAAGTTTTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21485680 81 - 44557958 AAATGATATCATAAATAACTGCCATTT-AAAACCAGTTTCCTTT-TCTGGAATATCTAAGAAAAGATCTTTTTGAAGTTTCAA i calJac3.chr20 I 761 I 306 s saiBol1.JH378225 6296158 81 + 6628207 AAATGATGTCATAAATAACTGTGATTT-AAAACCAGTTTCCTTT-TCTGGAATATCTAAGAAAAGATCTTTTAGAAGTTTCAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271547 73 - 5917169 AAATGATGT--------ACTGTGATTT-AAAACCAGTTTCCTTT-TCTGGAATATCTAAGAAAAGATCTTTTAGAAGGTTCAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9237484 81 - 10531588 AAATGATGTCATAAATAAATGTGATTT-AAAACCAGTTTCCTTT-TCTGGAATATCTAAGAAAAGATCTTTTAGAAGTTTCAA i aotNan1.NW_018500622v1 C 0 C 0 e otoGar3.GL873566 13648165 376 + 13852661 I a score=6111541.000000 s hg38.chr16_GL383557v1_alt 2634 636 + 89672 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTCAAGTATGCAGTGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCAAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGCTTTGTATCTATCAGCTCATACCTGAGTTCCATGAGTCTTCTAATAGAGACAGGTATTATAGGTATTAACCAAGATCTGAATTCAAGCCCTTGATACACCACTTATTTGCAAAGAGAATTGTTCTACACTGACATAACAAAtttc-cttttt----------ttgagagagagtcttattctgtcatccaggctggagtacagtggcattatctgggctcactgcaaccaccacctcattggttcaagc-aattctcgtgtctcagcctcccgaggagctgggattacaggcgtgcgccaccatgcttggctaatttttgtatttttaggagagagggggttttgccatgttgatcaagttggtctcaaactcctgacttcaagtgatctgcccacgtcagcctcccaaactgctggaatt--acaggtgtaagccaccacgcccTGTCTGACATAATGAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCT s panTro5.chr16 21428858 636 - 81586097 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTCAAGTATGCAGTGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCAAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGCTTTGTATCTATCAGCTCATACCTGAGTTCCATGAGTCTTCTAATAGAGACAGGTATTATAGGTATTAACCAAGATCTGAATTCAAGCCCTTGATACACCACTTATTTGCAAAGAGAATTGTTCTACTCTGACATAACAAAtttc-cttttt----------ttgagagagagtcttattctgtcatccaggctggaatacagtggcattatctgggctcactgcaaccaccacctcattggttcaagc-aattctcgtgtctcagcctcccgaggagctgggattacaggcgtgcgccaccatgcttggctaatttttgtatttttaggagagaaggggttttgccatgttgatcaagttggtctcaaactcctgacttcaagtgatctgcccacgtcagtctcccaaactgctggaatt--acaggtgtaagccaccacgcccTGTCTGACATAACGAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21495766 636 - 90481686 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTCAAGTATGCAGTGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCAAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGCTTTGTATCTATCAGCTCATACCTGAGTTCCATGAGTCTTCTAATAGAGACAGGTATTATAGGTATTAACCAAGATCTGAATTCAAGCCCTTGATACACCACTTATTTGCAAAGAGAATTGTTCTACACTGACATAACAAAtttc-cttttt----------ttgagagagagtcttattctgtcatccaggctggaatacagtggcattatctgggctcactgcaaccaccacctcattggttcaagc-aattctcgtgtctcagcctcccgaggagctgggattacaggcgtgcgccaccatgcttggctaatttttgtatttttaggagagagggggttttgccatgttgatcaagttggtctcaaactcctgacttcaagtgatctgcccacgtcagcctcccaaactgctggaatt--acaggtgtaagccaccacgcccTGTCTGACATAACGAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 728444 636 + 3010529 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTCAAGTATGCAGTGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCAAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGCTTTGTATCTATCAGCTCATAACTGAGTTCCATGAGTCTTCTAATAGAGACAGGTATTATAGGTATTAACCAAGATCTGAATTCAAGCCCTTGATACACCACTTATTTGCAAAGAGAATTGTTCTACACTGACATAACAAAtttc-cttttt----------ttgagagagagtcttattctgtcatccaggctggagtacagtggcattatctgggctcactgcaaccaccacctcattggttcaagc-aattctcgtgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttaggagagagggggttttgccatgttgatcaagttggtctcaaactcccgacttcaagtgatccacccacgtcagcctcccaaagtgctggaatt--acaggtgtgagccaccacgcccTGTCTGACATAACGAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53835935 636 + 163208435 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTCAAGTATGCAGTGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCAGC------------------------------------CAGAGACTTCAGTAGGTTTTGTTTTGCTTTGCTTTATATCTATCAGCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGACAGGTATTACAGGTATTAACCAAGATCTGAATTCAAGCCCTAGATACACCACTTATTTGCAAAGAGAATTGTTCTACACTGATGTAACAAAtttc-tttttt----------ttgagatagagtcttattctgtcatccaggctggagtacagtggcattatctgggctcactgcaacctccacctccttggttcaagc-aattctcatatctcagcctcctgaggagctggaattacaggcgtgcgccaccatgcttggctaatttttgtatttttaggagagagggggttttgccatgttgatcaagttggtctcaaactcctgacttcaagtgatctgcccacgtcagcctcccaaagtgctggaatt--acaggtgtgagccaccgcacccTGTCTGACATAATACATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGCCATTCTATTAGTTTCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21314856 636 - 74971481 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTTGAGTATGCAATGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTACATCTATCATCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCaagatctgaattcaagccctggatacaccacttattagcaatgagaATTGTTCTACACTGACATAACAAAtttc-tttttt----------ttgagatagagtcttattctgtcacccaggctggagtacagtggcataatcagggctcactgcaacctccaccttcttgattcaagc-aattctcatgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcccagcttcaactgatctgcccatgtcagcctcccaaagtgctggaatt--acaggcgtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTGTTAGTTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21025852 636 - 78541002 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTTGAGTATGCAATGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGATTTTGTTTTGCTTTGTTTTACATCTATCATCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCaagatctgaattcaagccctggatacaccacttattagcaatgagaATTGTTCTACACTGACATAACAAAtttc-tttttt----------ttgagatagagtcttattctgtcacccaggctggagtacagtggcataatcagggctcactgcaacctccaccttcttgattcaagc-aattctcatgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcccagcttcaactgatctgcccatgtcagcttcccaaagtgctggaatt--acaggcgtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTGTTAGTTTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14420200 636 + 26466322 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTTGAGTATGCAATGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTACATCTATCATCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCaagatctgaattcaagccctggatacaccacttattagcaatgagaATTGTTCTACACTGACATAACAAAtttc-tttttt----------ttgagatagagtcttattctgtcacccaggctggagtacagtggcataatcagggctcactgcaacctccaccttcttgattcaagc-aattctcatgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcccagcttcaactgatctgcccatgtcagcctcccaaagtgctggaatt--acaggcgtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAAAAAATTTCCAGACATTCTGTTAGTTTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747260 636 + 43916225 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTTGAGTATGCAACGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTACATCTATCATCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCaagatctgaattcaagccctggatacaccacttattagcaatgagaATTGTTCTACACTGACATAACAAAtttc-tttttt----------ttgagatagagtcttattctgtcacccaggctggagtacagtggcataatctgggctcactgcaacctccaccttcttgattcaagc-aattctcatgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcccggcttcaactgatctgcccacgtcagcctcccaaagtgctggaatt--acaggcgtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTGTTAGTTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58184161 637 + 75399963 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGTTGAGTATGCAGTGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTACATCTATCATCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCaagatctgaattcaagccctggatacaccacttattagcaatgagaATTGTTCTACACTGACATAACAAAtttcttttttt----------ttgagatagagtcttattctgtcacccaggctggagtacagtggcataatctgggctcactgcaacctccaccttcttgattcaagc-aattctcatgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgtatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcctggcttcaagtgatctgcccacatcagcctcccaaagtgctggaatt--acaggcgtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTGTTAGTTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6733418 636 - 7209941 AACAATGTTGTTCATGGCAAATACCACCTAAACATTTGAGTTTAAATGTTGAGTATGCAATGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTACATCTATCATCTCATACCTGAGTTCCATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCaagatctgaattcaagccctggatacaccacttattagcaatgagaATTGTTCTACACTGACATAACAAAtttc-tttttt----------ttgagatacagtcttattctgtcacccaggctggagtacagtggcataatctgggctcactgcaacctccaccttcttgattcaagc-aattctcatgtctcagcctcccgaggagctgggattacaggcatgcaccaccatgcttggctaatttttgcatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcccagcttcaactgatctgcccacgtcagcctcccaaagtgctggaatt--acaggagtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTGTTAGTTTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 474173 631 + 3907144 AACAATGTTGTTCATGGCAAATAATACCTAAACATTTGAGTTTAAATGCTGAGTATGCAATGTCAACAAAGACTCAAGCTTTGTGCTATTTTGCCAC------------------------------------CAGAGGCTTCAGTAGGTTTTGTTTTGC----TTTTACATCTATCATCTCATACCTGAGTTAAATGAGTCTTCTAGTAGAGTCAGGTATTATAGGTATAAACCAAGATCCGAATTCAAGCCCTGGATACACCACTTATTAGCAATGAGAATTGTTCTACACTGACATAACAAAtttc-tttttc----------ttgagatagagtcttattctgtca-ccaggctagagtacggtggcataatctgggctcactgcaacctccaccttcttgattcaagc-aattctcgtgtctcagcctcccgaggagctgggattacaggcatgcgccaccatgcttggctaatttttgtatttttaggagagaggggattttgccatgttgatcaagttagtctcaaactcctggcttcgagtgatctgcccacgtcagcctcccaaagtgctggaatt--ataggcgtgagccaccgtgcccTGTCTGACACAACAAATTTCTTATACAGAAGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTGTTAGTTTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21486067 674 - 44557958 AACAATGTTGTTAATGGGAAATAATACCTAAACATTTGAATTTAAATATTGAGGATGCTGTGTCTACAAAGACTCAGAGTTTGTACTATTTTGCAACCTACTGAAGCCACTgtgctgggcacagtgctgggcacagtgGCTTCAGTAGGTTTTGTTTTTC-TTGTTTTAC----ATCAGCTCATATCTGAGTTCCATAAGCCTTCTAGTAGAGATAGGTATTACAGGTATTAACCAATATCTGAACTCAAAGCCTGGATACACCACTTCTTAGCAGTGATAATTTTTCTACACTGGCATAACAAATACC-tttttt----ttttttttttaataaagtcttattctgtcacccaggctggagtacagtgacataatttgggctcactgcaacctctgtttccttggttcaagc-aattcgcatgtctcagcctcccaaggagctgggattacaggcattcgccaccatgccaggctaatttttgtattttaaggagacaggggg-tttgccatgttggtcaggctggtctcaaactcctgacttcaagtgatctacccgcctcagcctcccaaagtgctgggattacacagatgtgagccactgcacctggTATGACATAACAAATTTCTTATACAGACGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCT i calJac3.chr20 I 306 C 0 s saiBol1.JH378225 6296239 642 + 6628207 AACAATGTTGTTAATGAGAAATAATACCTAAACATTTGAATTTAAATATTGAGGATGCTGTGTCAACAAAGACTCAGAGTTTGTGCTATTTTGCAAC------------------------------------CGGAAGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTAC----ATCAGCTCATACCTGAGTTCCCTAAGTCTTCTAGTAGAAACAGGTATTATAGGTATTATCCAACATCTGAATTCAAAGCCTGGATACACCACTTCTTAGCAGTGATAATTTTTCTACACTGACATAACAAATACC-TTTTTTAAAAAAttttttaaaataaagtcttattctgtcacccaggctggagtacagtgacggaatttgggctcactgcaacctctgcctccttggttcaagcaaatcctcatgtctcagcctcccagggagctaggattacaggcattcgccaccatgccagcctaatttttgtattttaaggagagggggtg-tttgccatgttggtcaggctggtctcaaactcctagcttcaagtgatctgcccgcctcagcctcccaaagtgctgggattacacaggtatgagccactgtgcccggtcTGACATAACAAATTTCTTAT--AGATGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3271620 641 - 5917169 AACAATGTGGTTAATGGGAAATAATACCTAAACATTTGAATTTAAATATTGAGGATGCTGTGTCAACAAAGACTCAGAATTTGTGCTATTTTGCAAA------------------------------------CAGAAGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTAC----ATCAGCTCAAACCTGAGTTCCATAAGTCTTCTACTAGAGATAGGTATTACAGTTATTAACCAACATCTGAATTCAAAGCCTGGATACACCACTTCTTAGCAGCGATAATTTTTCTACACTGATATAACAAATACG-CTTTTTAAAAAA--AAATAAAATAAaatcttattctgccacccaggctggagtacagtgacgcaatttgggctcactgcaacctctgcctccttggttcaagc-aattctcatgtctcagcctcccaaggagctgggataacaggcattcgccaccatgccagtctaatttttgtattttaaggagagaggggg-tttgccatgttggtcaggctggtctcaaactcctggcttcaagtgatctgcccgcctcagcctcccaaagcgctgggattacacaggtgtgagccactgtgcccggtcTGACATAACAAATTTCTTATACAGACGTTTCAAGATTTTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCT i cebCap1.NW_016107433v1 C 0 I 1489 s aotNan1.NW_018500622v1 9237565 638 - 10531588 AACAATGTTGTTAATGGGAAATAATACCCAAACATTTGAATTTAAATATTGAGGATGCTGTGTAAACAAAGACTCAGAGTTTGTGCTATTTTGCAAC------------------------------------CAGAAGCTTCAGTAGGTTTTGTTTTGCTTTGTTTTAC----ATCAGCTCATACCTGAGTTCCATAAGTCTTCTAGTAGAGATAGGTATTATAGGTATTAACCAACATCTGAATTCAAAGCCTGGATACACCACTTCTTAGCAGTGATAATTTTTCTACACTGACATAACAAATACC-tttttt-----ttttttttaaatgaagtcttattctgtcacccaggctgcagtatggtgacataatttgggctcactgcaacctctgtctccttggttcaagc-aattctcatgtctcagtctcccaaggagctgggattacaggcattcgccaccatgccaggctaatttttgtattttaaggagagaggggg-tttgtcatgttggtcaggctggtctcaaactcctggcttcaagtgatctgcccacctcagcctcccaaagtgctgggattacacaggtgtgagccactgtgcccagtcTGACCTAACAAATTTCTTATACAGACGTTTCAAGATTCTTGGTAGAAAATTTCCAGACATTCTATTAGTTTCT i aotNan1.NW_018500622v1 C 0 C 0 e otoGar3.GL873566 13648165 376 + 13852661 I a score=431879.000000 s hg38.chr16_GL383557v1_alt 3270 49 + 89672 TATAAGTAAAACAGAGAAAACAGTACCTATAAAACTCAGGAATGAGATA s panTro5.chr16 21429494 49 - 81586097 TATAAGTAAAACAGAGAAAACAGTACCTATAAAACTCAGGAATGAGATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496402 49 - 90481686 TATAAGTAAAACAGAGAAAACAGTACCTATAAAACTCAGGAATGAGATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729080 49 + 3010529 CATAAGTAAAACAGAGAAAACAGTACCTATAAAACTCAGGAATGAGATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836571 49 + 163208435 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCAGGAATTAGATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315492 48 - 74971481 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCA-AAATGAGATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026488 48 - 78541002 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCA-AAATGAGATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14420836 48 + 26466322 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCA-AAATGAGATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747896 48 + 43916225 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCA-AAATGAGATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58184798 48 + 75399963 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCA-AAATGAGATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734054 48 - 7209941 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCA-AAATGAGATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 474804 49 + 3907144 TATAAGTAAAACAGAGAAAACAATACCTATAAAACTCAGGAGTGAGATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21486741 48 - 44557958 TATAAGTAAAACAGAGAAAACAAAACCTATCAAACTCACAAATGAGat- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6296881 48 + 6628207 TATAAGTAAAACAGAAAAAATAAAACCTATCAAACTCAGGAATGAGAT- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3273750 48 - 5917169 TATAAGTAAAACAGAAAAAATAAAACCTATCAAACGCAGGAATAAGAT- i cebCap1.NW_016107433v1 I 1489 C 0 s aotNan1.NW_018500622v1 9238203 48 - 10531588 TATAAGTAAAACAGAAAAAATAAAACCTATCAAACTCAGGAATGAGAT- i aotNan1.NW_018500622v1 C 0 C 0 e otoGar3.GL873566 13648165 376 + 13852661 I a score=1234378.000000 s hg38.chr16_GL383557v1_alt 3319 154 + 89672 AAAATTTCAGAGAATTTTTC--AAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATCAAGCATTTATTACATTGTAGAAGCAATGTGTTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA s panTro5.chr16 21429543 154 - 81586097 AAAATTTCAGAGAATTTTTC--AAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATCAAGCATTTATTACATTGTAGAAGCAATGTGTTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496451 154 - 90481686 AAAATTTCAGAGAATTTTTC--AAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATCAAGCATTTATTACATTGTAGAAGCAATGTGTTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729129 153 + 3010529 AAAATTTCAGAGAA-TTTTC--AAAAGAAA--CATATCATCCATCACTAGAAAATCATGTATCAAGCATTTATTACATTGTAGAAGCAATGTGTTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836620 154 + 163208435 AAAATTTTAGAGAATTTTTC--GAAAGAAA--CACATCATCCATCACTAGAAAATCACGTATCAAGCATTTATTACATTGTAGAAGCAATGTGTTAGGTG--------------------------------------TTCAGGAATTC-AGGTTTAGAAGGAAGTGGGACACGTAAACACTAAATGCAATGGAGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315540 154 - 74971481 AAAATTTTAGAGAATTTTTC--GAAATAAA--CACATCATCAATCACTAGAAAATCATGTATAAAGCATTTATTACATTGTAGAAGCAATGTGCTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026536 154 - 78541002 AAAATTTTAGAGAATTTTTC--GAAAGAAA--CACATCATCAATCACTAGAAAATCATGTATAAAGCATTTATTACATTGTAGAAGCAATGTGCTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14420884 154 + 26466322 AAAATTTTAGAGAATTTTTC--GAAAGAAA--CACATCATCAATCACTAGAAAATCATGTATAAAGCATTTATTACATTGTAGAAGCAATGTGCTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20747944 154 + 43916225 AAAATTTTAGAGAATTTTTC--AAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATAAAGCATTTATTACATTGTAGAAGCAATGTGCTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58184846 154 + 75399963 AAAATTTTAGAGAATTTTTC--GAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATAAAGCATTTATTACATTGTAGAAGCAATGTGCTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734102 154 - 7209941 AAAATTTTAGAGAATTTTCC--GAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATAAAGCATTTATTACATTGTAGAAGCAATGTGCTAAGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 474853 154 + 3907144 AAAATTTTAGAGAATTTTTC--AAAAGAAA--CACATCATCCATCACTAGAAAATCATGTATAAGGCATTTATTACATTGTAGAAGCAATGTGCTAGGTG--------------------------------------TTCAGGAATTT-AGGTTTAGAAGGAAGTGGGACATGTAAACACTAAATGCAATGGAGTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21486789 111 - 44557958 aaaattttaaataattttta--gaaaaaaaa----atCACCCATCACTAGAGAATCATGTATCAACCATTTATTACATTGTA-------------------------------------------------------------------------------GAAGTGGGACACATAAACACTGAATGCAATGCTGT- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6296929 114 + 6628207 AAAATTTTAAAGAATTTTTA--GAAAAAAAA-CATATCACCCATCACTAGAGAATCATGTATCAAGCATTTATCGCATTGTA-------------------------------------------------------------------------------GAAGTGGGACACATAAACACTGAATGCAATGTCGT- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3273798 114 - 5917169 AGAATTTTAAAGAATTTTTA--GAAAAAAAA-AAACACATCCATCACTAGAGAATTATGTATCAAGCATTTATGACATTGTA-------------------------------------------------------------------------------GAAGTGGGACACATAAACACCGAATGCAATGCCGT- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238251 115 - 10531588 AAAATTTTAAAGAAGTTTTA--GAAAAAAAAACACATCACCCATCACTAGAGAATCATGTATCAAGCATTTATTGCACTGTA-------------------------------------------------------------------------------GAAGTGGGACACATAAACACTGAATGCAATGCCGT- i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 888389 192 + 1009443 AAAATTTTAAAGAGTTTTTTTGGGAAAGAA--CTCA-CATTCATTACTGAAAAATCACTTATCAAACCATTCTTAAAGCACAGAAGGAAGgtgttaggtgctagaaatataaaaactatttatataatattcctgaccttcagaaagtcaaagtttacaagaaagtgagacac--aaacatcaagaacaataaagtg i dasNov3.JH569970 N 0 C 0 e otoGar3.GL873566 13648165 376 + 13852661 I a score=-11428.000000 s hg38.chr16_GL383557v1_alt 3473 3 + 89672 -TGT s panTro5.chr16 21429697 3 - 81586097 -TGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496605 3 - 90481686 -TGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729282 3 + 3010529 -TGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836774 3 + 163208435 -TAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315694 3 - 74971481 -TAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026690 3 - 78541002 -TAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421038 3 + 26466322 -TAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20748098 3 + 43916225 -TAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185000 3 + 75399963 -TAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734256 3 - 7209941 -TAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475007 3 + 3907144 -TGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21486900 1 - 44557958 ---T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297043 1 + 6628207 ---T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3273912 1 - 5917169 ---T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238366 1 - 10531588 ---T i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2905926 3 + 9850184 -tgt i proCoq1.NW_012152729v1 N 0 C 0 s dasNov3.JH569970 888581 3 + 1009443 gga- i dasNov3.JH569970 C 0 I 411 e otoGar3.GL873566 13648165 376 + 13852661 I a score=476175.000000 s hg38.chr16_GL383557v1_alt 3476 40 + 89672 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT s panTro5.chr16 21429700 40 - 81586097 AAGTGTGAACTACCAGTATTTGTTACTACAAAGTTTACTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496608 40 - 90481686 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729285 40 + 3010529 AAGTGTGAACTCTCAGTATTTGTTACTACAAAGTTTACTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836777 40 + 163208435 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315697 40 - 74971481 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026693 40 - 78541002 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421041 40 + 26466322 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20748101 40 + 43916225 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTGCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185003 40 + 75399963 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734259 40 - 7209941 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475010 40 + 3907144 AAGTGTGAACTATCAGTATTTGTTACTACAAAGTTTACTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21486901 40 - 44557958 AAGTGTGAACTATCAGTATTTGCTAGCACAAAGTTTCCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297044 40 + 6628207 AAGTGTGAACTATCAGTACTTGTTAGCACAAAGTTTCCtt i saiBol1.JH378225 C 0 I 313 s cebCap1.NW_016107433v1 3273913 40 - 5917169 AAATGTGAACTATCAGTATTTGTTAGCACAAAGTTTCCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238367 40 - 10531588 AAGTGTGAACTATCAGTATTTGTTAGCACAAAATTTCCTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2905929 40 + 9850184 aagtataaactgtaagtatgtATTAATACAAAGTTTACTT i proCoq1.NW_012152729v1 C 0 C 0 s dasNov3.JH569970 888995 40 + 1009443 AAGTGTGAACTTAAGGAATGCATTGATGCAAAGtttattt i dasNov3.JH569970 I 411 C 0 e otoGar3.GL873566 13648165 376 + 13852661 I a score=1195643.000000 s hg38.chr16_GL383557v1_alt 3516 110 + 89672 TTAGTTTTGAATGTTTTAAACCTTTGTATTCATTTTTTTTAAAACATGAAATGGCCACAATAAGCGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT s panTro5.chr16 21429740 110 - 81586097 TTAGTTTTGAATGTTTTAAACCTTTGTATTCACTTTTTTTAAAACATGAAATGGCCACAATAAGCGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496648 110 - 90481686 TTAGTTTTGAATGTTTTAAACCTTTGTATTCACTTTTTTTAAAACATGAAATGGCCACAATAAGCGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729325 110 + 3010529 TTAGTTTTGAATGTTTTAAACCTTTGTATTCATTTTTTTTAAAACATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836817 109 + 163208435 TTAGTTTCAAATGTTTTAAACCTTTGTATTC-TTTTTTTAAAAACATGAAATGGCCACAATAAGTGCTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315737 109 - 74971481 TTAGTTTCAAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGCATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026733 109 - 78541002 TTAGTTTCAAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGCATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421081 109 + 26466322 TTAGTTTCAAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGCATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20748141 109 + 43916225 TTAGTTTCGAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGCATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACtttctt i cerAty1.NW_011999143v1 C 0 I 899 s chlSab2.chr5 58185043 109 + 75399963 TTAGTTTTGAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGCATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734299 109 - 7209941 TTAGTTTCGAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGTATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGACTTTCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475050 109 + 3907144 TTAGTTTTGAATGTTTTAAACCTTTGTATTCA-TTTTTTAAAAGCATGAAATGGCCACAATAAGTGTTACTATATTGTATTTGTAAACGTTCTTCAAATCTGATTTTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21486941 102 - 44557958 ------TTATAG-TTTTAAATCTTTGTATTAA-TTTTTTGAAAACATGAAATGCCCACAATAAGTGTTACTATATTGTATTTATAAATGTCCTTCAAATCTGACTTTCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297397 107 + 6628207 TTATTTTTGTAT-TTTTAAA-CCTTGTATTAA-TTTTTTGAAAACATGAAATGCCCACAATAATTGTTACTATATTGTATTTATAAATGTTCTTCAAATCTGACTTTCTT i saiBol1.JH378225 I 313 C 0 s cebCap1.NW_016107433v1 3273953 108 - 5917169 TTATTTTTGTAT-TTTTAAACCTTTGTATTAA-TTTTTTGAAAACATGAAATGCCCACAGTAAGTGTTACTATATTGTATTTATAAATGTTCTTCAAATCTGACTTTCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238407 105 - 10531588 TTATTTTTGTAT-TTTTAAACCTTTGTATAAA-TTTTTTGAAAACAGGAAATGCCCAC---AAGTGTTACTATATTGTATTTATAAATGTTCTTCAAATCTGACTTTCTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2905969 108 + 9850184 TTATTTTTGAGTATTTTAAACTTTTATGTTAA--CTTTGAAAAACATGATATGCCCAAAATAATTGTTATTGTATGGTATTTATAAATGTTCTTCAAATCTGACTTTCTT i proCoq1.NW_012152729v1 C 0 C 0 s dasNov3.JH569970 889035 108 + 1009443 ttattttttaatgttttaaaggtttatattaa-aaaCAAACAAACATGAAATGTTCACAATAAGTATTAGTATATT-TGTCTGTAACTGTTCTTCAAATCTGACTTTGTT i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13648165 376 + 13852661 I a score=216241.000000 s hg38.chr16_GL383557v1_alt 3626 23 + 89672 Accagaatcaaaaggc--tacatac s panTro5.chr16 21429850 23 - 81586097 Accagaatcaaaaggc--tacatac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496758 23 - 90481686 Accagaatcaaaaggc--tacatac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729435 23 + 3010529 Accagaatcaaaaggc--tacatac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836926 23 + 163208435 Accagaatcaaacggc--tacatac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315846 25 - 74971481 Accagaatcaaaaggctatatatac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026842 25 - 78541002 Accagaatcaaaaggctatatatac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421190 25 + 26466322 Accagaatcaaaaggctatatatac i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58185152 25 + 75399963 Accagaatcaaaaggctatatatac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734408 25 - 7209941 Accagaatcaaaaggctatatatac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475159 25 + 3907144 Accagaatcaaaaggctatatatac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487043 23 - 44557958 Accagaatcaaaaggc--tacatac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297504 23 + 6628207 Accagaatcaaaaggc--tacatac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3274061 23 - 5917169 Accagaatcaagaggc--tacatac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238512 23 - 10531588 Accagaatcaaaaggc--tacatac i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906077 14 + 9850184 ACCagattca-----------atac i proCoq1.NW_012152729v1 C 0 C 0 s dasNov3.JH569970 889143 23 + 1009443 GCTACAGTCAAAAGGC--TACATAC i dasNov3.JH569970 C 0 I 797 e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e otoGar3.GL873566 13648165 376 + 13852661 I a score=1694662.000000 s hg38.chr16_GL383557v1_alt 3649 180 + 89672 tgtgtgagtccacatatatgacaatctggaaaaggcaaaac---aataaaggcagaaaacaaagtagtggttgctagagactggctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagac s panTro5.chr16 21429873 180 - 81586097 tgtgtgagtccacatatatgacaatctggaaaaggcaaaac---aataaaggcagaaaacaaagtagtggttgctagagactggctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496781 180 - 90481686 tgtgtgagtccacatatatgacaatctggaaaaggcaaaac---aataaaggcagaaaacaaagtagtggttgctagagactggctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729458 180 + 3010529 tgtgtgagtccacatatatgacaatctggaaaaggcaaaac---aataaaggcagaaaacaaagtagtggttgctagagactggctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53836949 176 + 163208435 tgtgtgagtccacatatatgacaatctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggttgctagagactggctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatat----tatcttaattgtggtgacagttatagac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21315871 180 - 74971481 cgtgagagtccacatacatgacaacctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggctgctagagactagctcttgttggagaaaaggactaactacaagtgaggaacgggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21026867 180 - 78541002 tgtgagagtccacatacacgacaacctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggctgctagagactagctcttgttggagaaaaggactaactacaagtgaggaacgggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421215 180 + 26466322 tgtgagagtccacatacatgacaacctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggctgctagagactagctcttgttggagaaaaggactaactacaagtgaggaacgggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagat i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58185177 180 + 75399963 tgtgagagtccacatacatgacaatctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggctgctagagactagctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734433 180 - 7209941 tgtgagagtccacatacatgacaatctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggctgcaagagactagctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475184 180 + 3907144 tatgagagtccacctatatgacaatctggaaaaggcaaaac---tataaaggcagaaaacaaagtagtggttgctagagactagctcttgttggagaaaaggactaactacaagtgaggaacaggggaacttttgggggtgatagaaatattatgtatcttaattgtggtgacagttatagac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487066 177 - 44557958 tgtgtgagtccacatatgtaacaatctggaaaaggcaaaac---tataaagacagaagacaaataagtgattgctagagactgaa---agtgagagaaaagtactaactaccagtgagggacagaggaacttttgggggtgacagaaatattatgtatcttaattgtagtgacagttatagac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297527 175 + 6628207 tgtgtgagtccacatacataacaatctggaaaaggcaaaac---tataaagacagaagacaaagaagtgattgctagagactgaa---agtgagagaaagggactaactatcagtaagggacaggggaacttttgggg--gacagaaatattatgtatcttaattgtagtgacagttacagac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3274084 177 - 5917169 tgtgtgagtccacatatgtaacaatctggaaaaggcaaaac---tataaagacagaagacaaagaagtgattgctagagactgaa---agtgagagaaaaggactaactatcagtaagggataggggaacttttgggggtgacagaaatattatgcatcttaattatagtgacagttacagac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238535 177 - 10531588 tgtgtgagtccacatatgtaacaatctggaaaaggcaaaac---tgtaaagacagaagacaaagaagtgattgctagagactgaa---agtgagagaaaaggactaactaccagtgagggacaggggaacttttgggggtgacagaaatattatgtatcttaattgtagtgacagttatagac i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906091 179 + 9850184 tgtgtgagtccaaatatatgaccggctggaaaaggcaaaacttttataaagacagaaaacagggtagcggttgctagagatcaga---ggtggaagaaagggactgactataag-ggggcatgagaaaacttttgggggtgatggaaatattatgtatcttaattgtggtgacagttaaagac i proCoq1.NW_012152729v1 C 0 I 87 e dasNov3.JH569970 889166 797 + 1009443 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e otoGar3.GL873566 13648165 376 + 13852661 I a score=137728.000000 s hg38.chr16_GL383557v1_alt 3829 21 + 89672 cgtatatacccatcaaaacac s panTro5.chr16 21430053 21 - 81586097 cgtatatacccatcaaaacac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496961 21 - 90481686 cgtatatacccatcaaaacac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729638 21 + 3010529 cgtatatacccatcaaaactc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837125 21 + 163208435 catatacacccatcaaagcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316051 21 - 74971481 catatacacccatcaaaatcc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027047 21 - 78541002 catatacacccatcaaaatcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421395 21 + 26466322 catatacacccatcaaaatcc i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58185357 21 + 75399963 catatacacccatcaaaatcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734613 21 - 7209941 catatacacccatcaaaatcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475364 21 + 3907144 catatacacccatcaaaaccc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487243 19 - 44557958 tatacacacccatcaaaac-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297702 19 + 6628207 tgtacacacctatcaaaac-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3274261 19 - 5917169 tgtacacacccatcaaaac-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238712 19 - 10531588 tgtacacacccatcaaaac-- i aotNan1.NW_018500622v1 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e otoGar3.GL873566 13648165 376 + 13852661 I a score=1204746.000000 s hg38.chr16_GL383557v1_alt 3850 137 + 89672 atagaactgggccaggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcgcttgaggccaagagtttgagactagcctgggcaatatagggagaccttgtctct------aaaaaaaa--ttt s panTro5.chr16 21430074 137 - 81586097 atagaactgggccaggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcgcttgaggccaagagtttgagactagcctgggcaatatagggagaccttgtctct------aaaaaaaa--TTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21496982 137 - 90481686 atagaactgggccaggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcgcttgaggccaagagtttgagactagcctgggcaatatagggagaccttgtctct------aaaaaaaa--TTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 729659 137 + 3010529 atagaactgggccaggcacagtggtttattcctgtaatcctagggttttggaaggctg---------------------aggcaagtggatcacttgaggccaagagtttgagactagcctgggcaatatagggagaccttgtctct------aaaaaaaa--ttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837146 135 + 163208435 atagaactgggccgggcacagtggtttattcctgtaatcccacggctttggaaggctg---------------------aggcaagtggattgcttgaggccaggagtttgagactagcctgggcaatatagggagaccttttatct------aaaaaaat--t-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316072 138 - 74971481 atagaactgggccgggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcacttgaggtcaggagtttgagactagcatgggcaatatagggagaccttgtctct-----aaaaaaaaa--ttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027068 138 - 78541002 atagaactgggccgggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcacttgaggtcaggagtttgagactagcatgggcaatatagggagaccttgtctct-----aaaaaaaaa--ttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421416 139 + 26466322 atagaactgggccgggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcacttgaggtcaggagtttgagactagcatgggcaatatagggagaccttgtctcta----aaaaaaaaa--ttt i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58185378 138 + 75399963 atagaactgggccgggcacagtggtttattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcacttgaggtcaggagtttgagactagcgtgggcaatatagggagaccttgtctct-----aaaaaaaaa--ttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734634 137 - 7209941 atagaactgggccgggcacagtggttcattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcacttgaggtcaggagtttgagactagcgtgggcaatatagggagaccttgtctct------aaaaaaaa--ttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475385 139 + 3907144 atggaactgggccgggcacagtggttgattcctgtaatcctagggctttggaaggctg---------------------aggcaagtggatcacttgaggccaggagtttgagactagtgtgagcaatatagggagaccttgtctcta----aaaaaaaat--ttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487262 137 - 44557958 ------ctgggctgggcactgtggcttattcctgtaatcccaggactttgggaagctg---------------------tggcaagaggaccacttgaggccaggagtttgaggctagcctgggcaatacagggagaccttgtctctaaaagaaaaaaaaa--ttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297721 133 + 6628207 ------ctgggctgggcacagtggcttattcctgtaatcccaggactttgggaagttg---------------------aggcaagaggaccacttgaggccaggagtttgagactagcctgggcaatacagggaaaccttgtctata----aaaaaaaaa--TTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3274280 139 - 5917169 ------ctgggctgggcacagtggcttatttctgtaatcccaggactttgggaagctg---------------------aagcaagaggaccacttgaggccaggagtttgagactagcctgggcaatacagggagaccttgtctctaaaaaaaaaaaaaaatttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238731 133 - 10531588 ------ctgggctgggcacagtggcttattcctgtaatcccaggactttgggaagctg---------------------aggcaagaggaccacttgaggccaggaatttgagactagcctgggcaatacagggagaccttgtctcta----aaaaaaaaa--att i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13648541 157 + 13852661 ATAGTTCCAAgctaggcatggtggttcatgccagtaa-cccaacaccttagaaggctggcagggcacagtaagaggccaaggtaggcaaatcacataaggccagaggttcaagaccatcctgggcaacatagcacaactccatctct------aaaaaaaa--ttt i otoGar3.GL873566 I 376 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I a score=2539.000000 s hg38.chr16_GL383557v1_alt 3987 2 + 89672 --tt s panPan2.chr16 21497119 2 - 90481686 --TT i panPan2.chr16 C 0 I 473 s gorGor5.CYUI01000018v1 729796 2 + 3010529 --tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837281 2 + 163208435 --tt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316210 2 - 74971481 --tt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027206 2 - 78541002 --tt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421555 2 + 26466322 --tt i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58185516 2 + 75399963 --tt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6734771 2 - 7209941 --tt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475524 2 + 3907144 --tt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487399 2 - 44557958 --tt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297854 1 + 6628207 --T- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3274419 2 - 5917169 --tt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238864 2 - 10531588 --tt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13648698 2 + 13852661 aa-- i otoGar3.GL873566 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e panTro5.chr16 21430211 0 - 81586097 C a score=1207658.000000 s hg38.chr16_GL383557v1_alt 3989 236 + 89672 tttaattagccaagcatgtggtggcatgcatctttagtcccagctactaggaaggctgaggcagaaggattgc------ttgag-cccaggagttcaaggctgcaatgacctatgattgtgccaccgcactccagcttgggtgacagagtaagaccctgtctc--aaaaaaaaaaacaaaacatggaac-tgtacgcctaaagagtggatgttactgtatgtaaattatatctcaat---------------aaatctgac s gorGor5.CYUI01000018v1 729798 236 + 3010529 tttaattagccaagcatgtcgtggcatgcatctttagtcccagctactacgaaggctgaggcagaaggattgc------ttgag-cccaggagttcaaggctgcaatgacctatgactgtgccactgcactccagcttgggtgacagagtaagaccctgtctc--aaaaaaaaaaacaacacatggaac-tgtacgcctaaagagtggatgttactgtatgtaaattatatctcaat---------------aaatctgac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837283 253 + 163208435 tttaattagccaagcatgcggtggcatgcatctttagtcccagctactaggaaggctgaggcagaaggattgc------ttgag-cccaggagttcaaggctgcaatgacctatgattgtgtcactgcactccagcttgggtgacagagtaagaccctgtctcaaaaaaaaaaaaaaaaaacatggaac-tgtatgcctaaagagtggatgttactgtatgtaaattatatctcaataaatctgacattaaaaaaTCTGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316212 232 - 74971481 ttaaattagccaagcatgtagtggtatgcatctctagtcccagctactaggaaggctgaggcaggaggattgc------ttgagccccaggagttcaaggctgcaatgacctatgattgtgccactgtaccccagcttgagtgacagagtaagaccccgtctc-------aaaaaaaaaaaaatggaac-tgtacacctaaagagtggatgttactatatgtaaattatatctcaat---------------aaatctgac i rheMac8.chr20 C 0 I 4 s macFas5.chr20 21027208 233 - 78541002 ttaaattagccaagcatgtagtggtatgcatctctagtcccagctactaggaaggctgaggcaggaggattgc------ttgagccccaggagttcaaggctgcaatgacctatgattgtgccactgtaccccagcttgagtgacagagtaagaccccgtctc------aaaaaaaaaaaaaatggaac-tgtacacctaaagagtggatgttactatatgtaaattatatctcaat---------------aaatctgac i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14421557 233 + 26466322 ttaaattagccaagcatgtagtggtatgcatctctagtcccagctactaggaaggctgaggcaggaggattgc------ttgagccccaggagttcaaggctgcaatgacctatgattgtgccactgtaccccagcttgagtgacagagtaagaccccgtctc------aaaaaaaaaaaaaatggaac-tgtacacctaaagagtggatgttactatatgtaaattatatctcaat---------------aaatctgac i macNem1.NW_012011355v1 C 0 I 4 s chlSab2.chr5 58185518 239 + 75399963 ttaaattagccaagcatgtagtggtatgcatttctagtcccagctactaggaaggctgaggcaggaggattgc------ttgagccccaggagttcaaggctgcaatgacctatgattgtgccactgtaccccagcttgagtgacagagtaagaccccgtcacaaaaaaaaaaaaaaaaaaaatggaac-tgtacacctaaagagtggatgttactatatgtaaattatatctcaat---------------aaatctgac i chlSab2.chr5 C 0 I 3 s manLeu1.NW_012101698v1 6734773 232 - 7209941 tttaattagccaagcatgtagtggtatgtatctctagtcccagctactaggaaggctgaggcaggaggattgc------ttgagccccaggagttcaaggctacaatgacctatgattgtgccactgtaccccagcttgagtgacagagtaagaccccgtctc-------aaaaaaaaaaaaatggaac-tgtacacctaaagagtggatgttactatatgtaaattatatctcaat---------------aaatctgac i manLeu1.NW_012101698v1 C 0 I 3 s colAng1.NW_012123265v1 475526 238 + 3907144 tttaattagccaagcatgtggtggtatgcgtctctagtcccagctactaggaagcctgaggcaggaggattgc------ttgagccccaggagttcaaggctgcaatgacctatgattgtgccactgtaccccagcttgagtgatagagtaagaccctgtctc-aaaaaaaaaaaaaaaaaaatggaac-tgtacacctaaagagtggatgttactgtatgtaaattatatctcaat---------------aaatctgac i colAng1.NW_012123265v1 C 0 I 3 s calJac3.chr20 21487401 222 - 44557958 tttaattagccaagcatgtgttggcaggcatttctaattccagctactcggaaggctaaggcaggaggactgc------ttgag-cccaagagtttaaggctgcagtgagctatgattgtgccactgcattccagcttgggtgacagagcaagaccctgtctc--------aaaataaacacatggaac-tatacacctaaagagcagatgctagtatatgtaaattataccacaat---------------a-------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6297855 136 + 6628207 -----TTggccaggca--ccgtggctgaagcttgtaatctcagcactttgggaggccgaggcgggtgggtcac--------gag-gtcgagagatcgaga-------------------------------ccatcctggtcaacatggtgaaaccctgtttc---------tattaaaaatacaaaa----------------------------------------------aat---------------t-------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3274421 222 - 5917169 tttaattagtcaagcatgtgttggcaggcatttctaattccagctactcagaaggctgaggcaggaggactgc------ttgag-cccaagagtttaaggctgcagtgagctatgattgtgccactgcactccagcttgggtgacagagcaagaccctgtctc--------aaaacaaacacatggaac-tatacacctaaaaagcagatactactgtatgtaaattatacctcaat---------------a-------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9238866 222 - 10531588 tttagttagccaaccatgtgttggcaggcatttctaattccagctactcagaaggctgaggcaggaggactgc------ttgag-cccaagagtttaaggctgcagtgagctatgattgtgccactgcactccagcttgggtgacagagcaagaccctgtctc--------aaaataaacacatggagc-tatacacctaaagagcagatgctagtgtatgtaaattatacctcagt---------------a-------- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13648700 222 + 13852661 --aaattagccagg------------ggggcctgaagttccacctactcaggaggatgaggccagaggattgtgattgtttgac-cccaggaatttgaggttacagtgaactctgattgtgccactgcattctag-gcaggcaacagagcaaaaccttgtctc---aaaaaaaaaaaaaaTCATTTATCAAACACAATCACAGAAGCAatg-tgttaggtggtagaaatgtaaagat---------------aaatc---- i otoGar3.GL873566 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e panPan2.chr16 21497121 473 - 90481686 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e panTro5.chr16 21430211 0 - 81586097 C a score=75.000000 s hg38.chr16_GL383557v1_alt 4225 3 + 89672 ttt s gorGor5.CYUI01000018v1 730034 3 + 3010529 ttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837536 3 + 163208435 TTT i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21027442 2 - 78541002 tt- i macFas5.chr20 I 1 I 1 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e aotNan1.NW_018500622v1 9239088 0 - 10531588 C e cebCap1.NW_016107433v1 3274643 0 - 5917169 C e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6297991 0 + 6628207 C e calJac3.chr20 21487623 0 - 44557958 C e otoGar3.GL873566 13648922 0 + 13852661 C e panTro5.chr16 21430211 0 - 81586097 C a score=300.000000 s hg38.chr16_GL383557v1_alt 4228 1 + 89672 C s gorGor5.CYUI01000018v1 730037 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837539 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e aotNan1.NW_018500622v1 9239088 0 - 10531588 C e cebCap1.NW_016107433v1 3274643 0 - 5917169 C e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6297991 0 + 6628207 C e calJac3.chr20 21487623 0 - 44557958 C e otoGar3.GL873566 13648922 0 + 13852661 C e panTro5.chr16 21430211 0 - 81586097 C a score=211676.000000 s hg38.chr16_GL383557v1_alt 4229 132 + 89672 TTggccaggcgcagtggctcacgcctgta--atcccagcactttgggaggctgaggcgggaggatca---gaggtcaggagatcgaga-------------------------------ccatcctggctaacatgatgaaaccccgtctct---------------actaaaaatacaaaaa s panTro5.chr16 21430211 132 - 81586097 TTggccgggcgcggtggctcacgcctgta--atcccagcactttgggaggctgaggcgggaggatca---gaggtcaggagatcgaga-------------------------------ccatcctggctaacatgatgaaaccccatctct---------------actaaaaatacaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730038 132 + 3010529 TTggccaggcgcggtggctcacgcctgta--atcccagcactttgggaggccgaggcgggaggatca---gaggtcaggagatcgaga-------------------------------ccatcctggctaacatgatgaaaccccgtctct---------------actaaaaatacaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837540 132 + 163208435 TTggccaggcgcggtggctcacgcctgta--atcccagcactttgggaggccgaggagggcggatca---gaggtcaggatatcaaga-------------------------------ccatcctggctaacatggtgaaaccccacctct---------------actaaaaatacaaaaa i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21487623 129 - 44557958 --ggccaggtgcggtggctcatccctgta--atctcagctctatgggaggctgaggcaggtggatcac--aaggtcaggagtttgaga-------------------------------ccagcctggcaaacatggtgaaacactgtct-----------------attaaaaatacaaaaa i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6297991 179 + 6628207 --agctgggcatggtggcacgtgcctgta--atcccagctactcaggaggctgaggcaggaggattgcttgagcctaagagtttaaggctgcagtgagctatgactgtgccactgcactccagcttgggtgacagagcaagaccctgtctcaaaataaacacatggaactatacacctaaaga i saiBol1.JH378225 C 0 I 31 s cebCap1.NW_016107433v1 3274643 131 - 5917169 --ggccaggtgcggtggctcatccctgta--attccagcactttgggaggctgaagcgggcggatcac--aaggtcaggagtttgaga-------------------------------ccagcctggcaaacatggtgaaacactgtctct---------------attaaaaatacaaaaa i cebCap1.NW_016107433v1 C 0 I 1178 s aotNan1.NW_018500622v1 9239088 131 - 10531588 --GTccaggtacagtggctcatccctgta--atcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagtttgagg-------------------------------ccagcctggcaaacatggtgaaacactgtctct---------------attaaaaatacaaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13648922 71 + 13852661 ------------------------atgtaacatcccagactttcag------------------------gagctcaggttccagaga----------------------------------------------aagtgagacacaGAATGT---------------AT---AAGTGTAAACC i otoGar3.GL873566 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I a score=87190.000000 s hg38.chr16_GL383557v1_alt 4361 62 + 89672 attagccgggtgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggaga s panTro5.chr16 21430343 62 - 81586097 attagccgggtgtggtggcgggtgcctgtagtcccagctactcaggaggctgaggcaggaga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730170 62 + 3010529 attagccgggtgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837672 62 + 163208435 attggccgggcgtggtggtgggcacctgtagccccagctactcaggaggctgaggcaggaga i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21487753 60 - 44557958 --aagccgggcatggtggtgcacacctgtaatcccagctactcaggaggttgaggcaagaga i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6298201 62 + 6628207 ataggccaggtgcagtggctcatccctgtaattccagcagtttgggaggctgaagtgggaga i saiBol1.JH378225 I 31 I 1645 s aotNan1.NW_018500622v1 9239219 61 - 10531588 -taagccaggcgtggtggtgcacacctgtaatcccagctacttaggaggctgaggcaggaga i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13648993 31 + 13852661 -----------ATCATgggcggctcctgtggctcca-------aggagg------------- i otoGar3.GL873566 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I a score=26074.000000 s hg38.chr16_GL383557v1_alt 4423 31 + 89672 atggcgtgaatctggga-gatggagcttgcag s panTro5.chr16 21430405 31 - 81586097 atggcgtgaatctggga-gatggagcttgcag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730232 31 + 3010529 atggcgtgaatctggga-gatggagcttgcag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837734 31 + 163208435 atggcgtgaacacggga-ggcggagcttgcag i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21487813 30 - 44557958 attgcttgaatccaaga-ggcagag-gtgcag i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239280 30 - 10531588 attgcttgaatcccgga-ggcagag-gttcag i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13649024 32 + 13852661 agggcgccagccccatatgccagaggtggcag i otoGar3.GL873566 C 0 I 435 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6298263 1645 + 6628207 I a score=56763.000000 s hg38.chr16_GL383557v1_alt 4454 55 + 89672 tgagccgagatcatgccactgcactccagcctgggcaac-gagtaagactctgtct s panTro5.chr16 21430436 55 - 81586097 tgagccgagatcatgccactgcactccagcctgggcaac-gagtaagactctgtct i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730263 55 + 3010529 tgagccgagatcatgccactgcactccagcctgggcaac-gagtaagactctgtct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837765 56 + 163208435 tgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccggct i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21487843 56 - 44557958 tgagccaagattgcaccactgcactccagcatgggtggcagatcaagtctttgtat i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239310 56 - 10531588 tgagccaagatctcaccactgcactccagcatgggtggcggagcaagtctttgtct i aotNan1.NW_018500622v1 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6298263 1645 + 6628207 I e otoGar3.GL873566 13649056 435 + 13852661 I a score=13868.000000 s hg38.chr16_GL383557v1_alt 4509 17 + 89672 caaaaaaaaaaaaaaaa s panTro5.chr16 21430491 17 - 81586097 caaaaaaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730318 17 + 3010529 caaaaaaaaaaaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837821 16 + 163208435 taaaaaaaaaaaaaaa- i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21487899 6 - 44557958 c-----------caaaa i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239366 17 - 10531588 caaaaaaaaaaaaaaaa i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22429767 17 - 129401213 CAAACAAAAACAAAACA i mm10.chr8 N 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6298263 1645 + 6628207 I e otoGar3.GL873566 13649056 435 + 13852661 I a score=-2625.000000 s hg38.chr16_GL383557v1_alt 4526 3 + 89672 aaa- s panTro5.chr16 21430508 3 - 81586097 aaa- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730335 1 + 3010529 a--- i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21487905 3 - 44557958 aaa- i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239383 3 - 10531588 aaa- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13649491 2 + 13852661 -AA- i otoGar3.GL873566 I 435 I 1 s mm10.chr8 22429784 3 - 129401213 -CAC i mm10.chr8 C 0 C 0 e proCoq1.NW_012152729v1 2906270 87 + 9850184 I e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6298263 1645 + 6628207 I e nomLeu3.chr2 53837837 0 + 163208435 C a score=1911.000000 s hg38.chr16_GL383557v1_alt 4529 1 + 89672 a s panTro5.chr16 21430511 1 - 81586097 a i panTro5.chr16 C 0 C 0 s calJac3.chr20 21487908 1 - 44557958 a i calJac3.chr20 C 0 I 27 s aotNan1.NW_018500622v1 9239386 1 - 10531588 a i aotNan1.NW_018500622v1 C 0 I 27 s proCoq1.NW_012152729v1 2906357 1 + 9850184 A i proCoq1.NW_012152729v1 I 87 C 0 s otoGar3.GL873566 13649494 1 + 13852661 A i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22429787 1 - 129401213 A i mm10.chr8 C 0 C 0 e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e colAng1.NW_012123265v1 475764 3 + 3907144 I e manLeu1.NW_012101698v1 6735005 3 - 7209941 I e chlSab2.chr5 58185757 3 + 75399963 I e cerAty1.NW_011999143v1 20748250 899 + 43916225 I e saiBol1.JH378225 6298263 1645 + 6628207 I e nomLeu3.chr2 53837837 0 + 163208435 C e gorGor5.CYUI01000018v1 730336 0 + 3010529 C a score=4095.000000 s hg38.chr16_GL383557v1_alt 4530 1 + 89672 a s cerAty1.NW_011999143v1 20749149 1 + 43916225 a i cerAty1.NW_011999143v1 I 899 C 0 s chlSab2.chr5 58185760 1 + 75399963 a i chlSab2.chr5 I 3 C 0 s manLeu1.NW_012101698v1 6735008 1 - 7209941 a i manLeu1.NW_012101698v1 I 3 C 0 s colAng1.NW_012123265v1 475767 1 + 3907144 a i colAng1.NW_012123265v1 I 3 C 0 s calJac3.chr20 21487936 1 - 44557958 A i calJac3.chr20 I 27 C 0 s aotNan1.NW_018500622v1 9239414 1 - 10531588 A i aotNan1.NW_018500622v1 I 27 C 0 s proCoq1.NW_012152729v1 2906358 1 + 9850184 A i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649495 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22429788 1 - 129401213 A i mm10.chr8 C 0 C 0 e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e macNem1.NW_012011355v1 14421790 4 + 26466322 I e rheMac8.chr20 21316444 4 - 74971481 I e macFas5.chr20 21027444 1 - 78541002 I e saiBol1.JH378225 6298263 1645 + 6628207 I e nomLeu3.chr2 53837837 0 + 163208435 C e gorGor5.CYUI01000018v1 730336 0 + 3010529 C e panTro5.chr16 21430512 0 - 81586097 C a score=13821.000000 s hg38.chr16_GL383557v1_alt 4531 4 + 89672 --aaaa------------ s rheMac8.chr20 21316448 4 - 74971481 --aaaa------------ i rheMac8.chr20 I 4 C 0 s macFas5.chr20 21027445 4 - 78541002 --aaaa------------ i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14421794 4 + 26466322 --aaaa------------ i macNem1.NW_012011355v1 I 4 C 0 s cerAty1.NW_011999143v1 20749150 4 + 43916225 --aaaa------------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185761 4 + 75399963 --aaaa------------ i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735009 4 - 7209941 --aaaa------------ i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475768 4 + 3907144 --aaaa------------ i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487937 4 - 44557958 --AAAA------------ i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239415 4 - 10531588 --AAAA------------ i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906359 4 + 9850184 --AAAC------------ i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649496 4 + 13852661 --AAAT------------ i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22429789 18 - 129401213 ACAAAACTCCCCCACATT i mm10.chr8 C 0 C 0 e dasNov3.JH569970 889166 797 + 1009443 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e saiBol1.JH378225 6298263 1645 + 6628207 I e nomLeu3.chr2 53837837 0 + 163208435 C e gorGor5.CYUI01000018v1 730336 0 + 3010529 C e panTro5.chr16 21430512 0 - 81586097 C a score=714010.000000 s hg38.chr16_GL383557v1_alt 4535 75 + 89672 aTCTGA----CTTTCTTGCATTGGAACATACATTTTCTAAATACTTACATAAAACCATCAAGAGGCTTAAGTAAGTTAT s panTro5.chr16 21430512 74 - 81586097 -TCTGA----CTTTCTTGCATTGGAACATACATTTTCTAAACACTTACATAAAACCATCAAGAGGCTTAAGTAAGTTAT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730336 74 + 3010529 -TCTGA----CTTTCTTGCATTGGAACATACATTTTCTAAACACTTACATAAAACCATCAAGAGGCTTAAGTAAGTTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837837 74 + 163208435 -aCTGA----CTTTCTTGCATTGGAACATACATTTTCTAAATACTTACATAAAACCATCAAGAAGCTTAAATAAGTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316452 75 - 74971481 aTCTGA----CCTTCTTGCACTGGAACATACATTTTCTAAATACTTACACAAAATCATCAAGAAGCTTAAATAAGTTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027449 75 - 78541002 aTCTGA----CCTTCTTGCATTGGAACATACATTTTCTAAATACTTACACAAAATCATCAAGAAGCTTAAATAAGTTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421798 75 + 26466322 aTCTGA----CCTTCTTGCATTGGAACATACATTTTCTAAATACTTACACAAAATCATCAAGAAGCTTAAATAAGTTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749154 75 + 43916225 aTCTGA----CCTTCTTGCATTGGAACATACATTTTCTAAATACTTACACAAAATCATCAAGAAGCTTAAATAAGTTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185765 75 + 75399963 aTCTGA----CCTTCTTGCATTGGAACATACATTTTCTAAATACTTACACAAAATCATCAAGAAGCTTAAATAAGTTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735013 75 - 7209941 aTCTGA----CCTTCTTGCATTGGAACATACATTTTCTAAATACTTACACAAAATCATCAAGAAGCTTAAATAAGTTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475772 75 + 3907144 aTCTGA----CCTTCTTGCATTGGAACATACATTTTCTAAATACTTACACAAAACCATCAAGAAGCTTAAATAAGTTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21487941 75 - 44557958 ATCTGA----CTTTCTTGCATTGGAGCAGATATTTTCCAAATACTTACATAAAACCATCAGAAAGCTTAAATAAGTTAT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239419 75 - 10531588 ATCTGA----CTTTCTTGCATTGGAGCATATATTTTCTAAATACTTACATAAAACCATCAGGAAGCTTAAATAAGTTAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906363 75 + 9850184 ATCTGA----CTTTCTGGCAGTGAAATATACATCGTATAAATATTTATATAAAACCATCAAGAAGCTTAAACAAGTTAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649500 70 + 13852661 ATCTGA----CTTTCTTGCAGTGAGATACATATCT-----ATATTTATATAGAACCATCAAGAAGCTTAAATAAGTTAT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22429807 72 - 129401213 ATCTAACCATCTTTCTTGCAGAAAAATATATATTT-------GTTGACATAAAACCACCAAGAAGCTTAAATAAATGAT i mm10.chr8 C 0 I 158 s dasNov3.JH569970 889963 66 + 1009443 ATCTGG----CTTTCTTG-AGGAGAATATTCATTTTCTAAATACTTGTATAAAGCCATAA--------AAATAAATTAT i dasNov3.JH569970 I 797 C 0 e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e saiBol1.JH378225 6298263 1645 + 6628207 I a score=81825.000000 s hg38.chr16_GL383557v1_alt 4610 8 + 89672 GGGTACCT s panTro5.chr16 21430586 8 - 81586097 GGGTACCT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730410 8 + 3010529 GAGTACCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837911 8 + 163208435 GGGTACCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316527 8 - 74971481 GGGTACCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027524 8 - 78541002 GGGTACCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421873 8 + 26466322 GGGTACCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749229 8 + 43916225 GGGTACCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185840 8 + 75399963 GGGTACCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735088 8 - 7209941 GGGTACCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475847 8 + 3907144 GGGTACCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488016 8 - 44557958 GGGTACCT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239494 8 - 10531588 GGGTACCT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906438 8 + 9850184 GGGTACCT i proCoq1.NW_012152729v1 C 0 I 1 s otoGar3.GL873566 13649570 8 + 13852661 GGGTACCT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 890029 8 + 1009443 AGTCACTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e saiBol1.JH378225 6298263 1645 + 6628207 I a score=68855.000000 s hg38.chr16_GL383557v1_alt 4618 12 + 89672 TC---GCTTAAAAAT s panTro5.chr16 21430594 12 - 81586097 TC---GCTTAAAAAT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730418 12 + 3010529 TC---GCTTAAAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837919 12 + 163208435 TC---ACTTAAAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316535 12 - 74971481 TT---GCTTACAAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027532 12 - 78541002 TT---GCTTACAAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421881 12 + 26466322 TT---GCTTACAAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749237 12 + 43916225 TT---GCTTACAAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185848 12 + 75399963 TT---GCTTACAAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735096 12 - 7209941 TT---GCTTACAAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475855 12 + 3907144 TT---GCTTACAAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488024 13 - 44557958 TCA--GCTTAAAAAT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239502 13 - 10531588 TCA--GCTTAAAAAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906447 12 + 9850184 TG---GCTTAGAAAT i proCoq1.NW_012152729v1 I 1 C 0 s dasNov3.JH569970 890037 13 + 1009443 --TGAGCCTAGAAAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e saiBol1.JH378225 6298263 1645 + 6628207 I e otoGar3.GL873566 13649578 0 + 13852661 C a score=65620.000000 s hg38.chr16_GL383557v1_alt 4630 9 + 89672 GCAAAACCT s panTro5.chr16 21430606 9 - 81586097 GCAAAACCT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730430 9 + 3010529 GCAAAACCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837931 9 + 163208435 GCAAAATCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316547 9 - 74971481 ACAAAATCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027544 9 - 78541002 ACAAAATCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421893 9 + 26466322 ACAAAATCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749249 9 + 43916225 ACAAAATCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185860 9 + 75399963 ACAAAATCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735108 9 - 7209941 ACAAAATCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475867 9 + 3907144 ACAAAATCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488037 9 - 44557958 GCAAAATCT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239515 9 - 10531588 GCAAAATCT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906459 9 + 9850184 ACAAAACCT i proCoq1.NW_012152729v1 C 0 I 2 e mm10.chr8 22429879 158 - 129401213 I e dasNov3.JH569970 890050 0 + 1009443 C e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e saiBol1.JH378225 6298263 1645 + 6628207 I e otoGar3.GL873566 13649578 0 + 13852661 C a score=585984.000000 s hg38.chr16_GL383557v1_alt 4639 88 + 89672 GGAGTTgggcacagtggctcatgcctgtaattccagcactttgggaggccaaggcaggcagatcatgaggtcaggagatcaagaccat s panTro5.chr16 21430615 88 - 81586097 GGggttgggcacagtggctcatgcctgtaattccagcactttgggaggccaaggcaggcagatcatgaggtcaggagatcaagaccat i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730439 88 + 3010529 GGggttgggcacagtggctcatgcctgtaattccagcattttgggaggccaaggcaggcagatcatgaggtcaggagatcaagaccat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53837940 88 + 163208435 GGggctgggcacagtggctcatgcctgtaattccagcactttgggaggccaaggcaggcagatcatgaggtcaggagatcaagaccat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316556 88 - 74971481 GGggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtgaggagatcaagaccat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027553 88 - 78541002 GGggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagatcaagaccat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421902 88 + 26466322 GGggctgggcgcagtggctcatgcctgtaatcccagcactttggaaggccgaggcaggcagatcatgaggtcaggagatcaagaccat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749258 88 + 43916225 GGggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagatcaagaccat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185869 88 + 75399963 GGggctgggcgcagtggctcatgcctgtaatcctagcactttgggaggccgaggcaggcagatcatgaggtcaggagctcaagaccat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735117 88 - 7209941 GGggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagatcaagaccat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475876 88 + 3907144 GGggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcatgaggtcaggagatcaagaccat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488046 88 - 44557958 GGggccaggcgaactggctcacgcctataatcccaccattttgagaggctgaggcgggcagatcacaaggttaggagatcaagaccat i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239524 88 - 10531588 GGggccaggcgaagtgactcactcctgtaatcccaccactttgggaggctgaggcgggcggactacgaggttaggagatcaagaccat i aotNan1.NW_018500622v1 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e proCoq1.NW_012152729v1 2906468 2 + 9850184 I e dasNov3.JH569970 890050 0 + 1009443 C e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e panPan2.chr16 21497121 473 - 90481686 I e saiBol1.JH378225 6298263 1645 + 6628207 I e otoGar3.GL873566 13649578 0 + 13852661 C a score=1081163.000000 s hg38.chr16_GL383557v1_alt 4727 152 + 89672 cctggccaacatggtgaaacccccgtttctaccaaaaatacaaaaattagctgggcgt-ggtggcacgtgcctataatcccagttactcgagaggctgaggcaggagaattgcttaaaccagggagtcggaggttgcagtgag-ccaagatcgc s panTro5.chr16 21430703 152 - 81586097 cccggccaacatggtgaaacccccgtttctaccaaaaatacaaaaattagctgggcgt-ggtggcacgtgcctataatcccagttactcgagaggctgaggcaggagaatcgcttaaaccagggagtcggaggttgcagtgag-ccaagatcgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497594 152 - 90481686 cctggccaacatggtgaaacccccgcttctaccaaaaatacaaaaattagctgggtgt-ggtggcacgtgcctataatcccagttactcgagaggctgaggcaggagaatcgcttaaaccagggagtcggaggttgcagtgag-ccaagatcgc i panPan2.chr16 I 473 C 0 s gorGor5.CYUI01000018v1 730527 154 + 3010529 cctggccaacatggtgaaacccccgtttctaccaaaaatacaaaaattagctgggcgtgggtggcacgtgcctataatcccagttacttcagaggctgaggcaggagaatcgcttaaaccagggagtcggaggttgcagtgagcccaagatcgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838028 152 + 163208435 cctggccaacatggtgaaacccccgtttctaccaaaaatacaaaaattagctgggcgt-ggtggcacatgcctataatcccagctactcgagaggctgaggcaggagaatcgcttaaaccagggagtcagaggttgcagagag-ccaagatcgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316644 151 - 74971481 cctggccaacgtggtgaaaccgccgtctctacaaaaaatacaaaaattagctgggca--ggtggcacgtgtctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggagtcggaggttgcagtgag-ccaagattgc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027641 151 - 78541002 cctggccaacgtggtgaaaccgccgtctctacaaaaaatacaaaaattagctgggca--ggtggcacgtgtctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggagtcggaggttgcagtgag-ccaagattgc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14421990 151 + 26466322 cctggccaacgtggtgaaaccgccgtctctacaaaaaatacaaaaattagctgggca--ggtggcacgtgtctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggagtcggaggttgcagtgag-ccaagattgc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749346 151 + 43916225 cctggccaacgtggtgaaaccgccgtctctacaaaaaatacaaaaattagctgggca--gggggcacgtgtctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggaatcggaggttgcagtgag-ccaagattgc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58185957 151 + 75399963 tctggccaacgtggtgaaaccgctgtctctacaaaaaatacaaaaattagctgggca--ggtggcacgtgtctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggagtcggaggttgcagtgag-ccaagactgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735205 151 - 7209941 cctggccaacgtggtgaaaccgccgtctgtacaaaaaatacaaaaattagctgggca--ggtggcacgtgtctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggagtcggaggttgcagtgag-ccaagattga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 475964 151 + 3907144 cctggccaatgtggtgaaaccgccgtctctacaaaaaatacaaaaactagctgggcg--ggtggcacatgcctataatcccaggtactcgacaggctgaggcaggagaatcacttaaaccagggagtcggaggttgcagtgag-ccaagatcgc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488134 151 - 44557958 gcgggccaacatagtgaaacc-ccatctttactaaaaatacaaaaattagctgagtgt-ggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggaggatagcttgaaccagggagtcaaaggttgcagtgaa-ctgagatcac i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9239612 144 - 10531588 gcgggccaacatggtaaaacc-ccgtctttactaaaaatacaaaaattaactgagtgt-ggtgg-------ctataatcccagctactcaggaggttgaggcaggaggatcgcttgaaccagggagtcaaaggttgcagtgaa-ctgagatcac i aotNan1.NW_018500622v1 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e proCoq1.NW_012152729v1 2906468 2 + 9850184 I e dasNov3.JH569970 890050 0 + 1009443 C e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e saiBol1.JH378225 6298263 1645 + 6628207 I e otoGar3.GL873566 13649578 0 + 13852661 C a score=423208.000000 s hg38.chr16_GL383557v1_alt 4879 58 + 89672 gccactgcactccagctt-ggtaac-acagtgagactccatctcCAaaaacaaaacaaaa s panTro5.chr16 21430855 58 - 81586097 gccactgcactccagctt-ggtaac-acagtgagactccatctccaaaaacaaaacaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497746 58 - 90481686 gccactgcactccagctt-ggtaac-acagtgagactccatctcCAaaaacaaaacaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730681 58 + 3010529 gccactgcactccagctt-ggtaac-acagtgagactccatctcCAaaaacaaaacaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838180 58 + 163208435 gccactgcattccagcct-ggtgat-ggagtgagactccatctcCAaaaataatataaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316795 58 - 74971481 accattgcactccagcct-ggtgac-agagtgagactccatctccaaaaaataaataaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027792 58 - 78541002 accattgcactccagcct-ggtgac-agagtgagactccatctccaaaaaataaataaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422141 58 + 26466322 gccattgcactccagcct-ggtgac-agagtgagactccatctccaaaaaataaataaat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749497 54 + 43916225 gccattgcactccagcct-ggtgac-agagtgagactccatctccaaa----aaataaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186108 54 + 75399963 gccactgcactccagcct-ggtgac-agagtgagactccatctccaaa----aaataaat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735356 58 - 7209941 gccattgcactccagcct-ggtgac-agagtgagactccacctccaaaaaataaataaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476115 54 + 3907144 gccactgcactccagcct-ggtgac-agaatgagactccatctccaaa----aaataaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488285 58 - 44557958 gccactgcactccagcct-ggcaac-agagcgagactccatctcaaaaaaaaaaaaaaag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6299908 60 + 6628207 gccattgcactccagcctgggtaacaagagcaaaattccgtctcaaaaaaaaaaaagaaa i saiBol1.JH378225 I 1645 C 0 s aotNan1.NW_018500622v1 9239756 58 - 10531588 gccattgcactccagcct-ggcaac-agagcaagactccatctcaaaaaaaaaaaaaaaa i aotNan1.NW_018500622v1 C 0 I 85 e mm10.chr8 22429879 158 - 129401213 I e proCoq1.NW_012152729v1 2906468 2 + 9850184 I e dasNov3.JH569970 890050 0 + 1009443 C e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e otoGar3.GL873566 13649578 0 + 13852661 C a score=-5888.000000 s hg38.chr16_GL383557v1_alt 4937 26 + 89672 --------------caaaacaaaacaaaacaaaacaaaac s panTro5.chr16 21430913 26 - 81586097 --------------caaaacaaaacaaaacaaaacaaaac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497804 16 - 90481686 --------------caaaacaaaacaaaac---------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730739 7 + 3010529 --------------caaaaca------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838238 12 + 163208435 --------------taaaataaaata-------------- i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21488343 22 - 44557958 taaaaTctgaggcctaaagaaa------------------ i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6299968 16 + 6628207 ------CTCCGTCTCAAAAAAC------------------ i saiBol1.JH378225 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e proCoq1.NW_012152729v1 2906468 2 + 9850184 I e dasNov3.JH569970 890050 0 + 1009443 C e aotNan1.NW_018500622v1 9239814 85 - 10531588 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I e macNem1.NW_012011355v1 14422199 0 + 26466322 C e rheMac8.chr20 21316853 0 - 74971481 C e macFas5.chr20 21027850 0 - 78541002 C e colAng1.NW_012123265v1 476169 0 + 3907144 C e manLeu1.NW_012101698v1 6735414 0 - 7209941 C e chlSab2.chr5 58186162 0 + 75399963 C e cerAty1.NW_011999143v1 20749551 0 + 43916225 C e otoGar3.GL873566 13649578 0 + 13852661 C a score=33617.000000 s hg38.chr16_GL383557v1_alt 4963 12 + 89672 aaaacaaaataa s panTro5.chr16 21430939 12 - 81586097 aaaacaaaataa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497820 6 - 90481686 ------aaaTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730746 6 + 3010529 ------aaataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838250 6 + 163208435 ------aaataa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316853 6 - 74971481 ------aaataa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027850 6 - 78541002 ------aaataa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422199 6 + 26466322 ------aaataa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749551 6 + 43916225 ------aaataa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186162 6 + 75399963 ------aaataa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735414 6 - 7209941 ------aaataa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476169 6 + 3907144 ------aaataa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488365 6 - 44557958 ------tcagaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6299984 6 + 6628207 ------AAAAAA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13649578 12 + 13852661 GAAGCTTAGAAA i otoGar3.GL873566 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e proCoq1.NW_012152729v1 2906468 2 + 9850184 I e dasNov3.JH569970 890050 0 + 1009443 C e aotNan1.NW_018500622v1 9239814 85 - 10531588 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I a score=63284.000000 s hg38.chr16_GL383557v1_alt 4975 12 + 89672 aat----------------------------aaaaTCTGG s panTro5.chr16 21430951 12 - 81586097 aat----------------------------aaaaTCTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497826 12 - 90481686 AAT----------------------------AAAATCTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730752 12 + 3010529 aat----------------------------aaaaTCTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838256 13 + 163208435 aat---------------------------aaaaATCTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316859 12 - 74971481 aat----------------------------aaaaTCTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027856 12 - 78541002 aat----------------------------aaaaTCTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422205 12 + 26466322 aat----------------------------aaaaTCTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749557 12 + 43916225 aat----------------------------aaaaTCTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186168 12 + 75399963 aat----------------------------aaaaTCTGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735420 12 - 7209941 aat----------------------------aaaaTCTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476175 12 + 3907144 aat----------------------------aaaaTCTGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488371 35 - 44557958 aacttattctaagtcatagttggtctatggcaaag----- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6299990 7 + 6628207 AAC----------------------------AAAA----- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13649590 12 + 13852661 TAC----------------------------AAAACCTAG i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 890050 12 + 1009443 AAC----------------------------AAAACCTAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e proCoq1.NW_012152729v1 2906468 2 + 9850184 I e aotNan1.NW_018500622v1 9239814 85 - 10531588 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I a score=50979.000000 s hg38.chr16_GL383557v1_alt 4987 6 + 89672 TTTCTA s panTro5.chr16 21430963 6 - 81586097 TTTCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497838 6 - 90481686 TTTCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730764 6 + 3010529 TTTCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838269 6 + 163208435 TTTCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316871 6 - 74971481 TTTCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027868 6 - 78541002 TTTCTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422217 6 + 26466322 TTTCTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749569 6 + 43916225 TTTCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186180 6 + 75399963 TTTCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735432 6 - 7209941 TTTCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476187 6 + 3907144 TTTCTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488406 3 - 44557958 ---cca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6299997 3 + 6628207 ---CAA i saiBol1.JH378225 C 0 C 0 s proCoq1.NW_012152729v1 2906470 6 + 9850184 TTTCTG i proCoq1.NW_012152729v1 I 2 C 0 s otoGar3.GL873566 13649602 6 + 13852661 TTTCTG i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 890062 6 + 1009443 TATCTG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22429879 158 - 129401213 I e aotNan1.NW_018500622v1 9239814 85 - 10531588 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I a score=61601.000000 s hg38.chr16_GL383557v1_alt 4993 6 + 89672 TGAC----TA s panTro5.chr16 21430969 6 - 81586097 TGAC----TA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497844 6 - 90481686 TGAC----TA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730770 6 + 3010529 TGAC----TA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838275 6 + 163208435 TGAC----TA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316877 6 - 74971481 TGAC----TA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027874 6 - 78541002 TGAC----TA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422223 6 + 26466322 TGAC----TA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749575 6 + 43916225 TGAC----TA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186186 6 + 75399963 TGAC----TA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735438 6 - 7209941 TGAC----TA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476193 6 + 3907144 TGAC----TA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488409 6 - 44557958 tggc----ta i calJac3.chr20 C 0 I 11 s saiBol1.JH378225 6300000 10 + 6628207 CAACAACAAA i saiBol1.JH378225 C 0 I 11 s proCoq1.NW_012152729v1 2906476 6 + 9850184 TGAC----TA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649608 6 + 13852661 TGAC----TA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430037 6 - 129401213 tggc----tG i mm10.chr8 I 158 C 0 s dasNov3.JH569970 890068 6 + 1009443 TGAC----CA i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9239814 85 - 10531588 I e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I a score=561659.000000 s hg38.chr16_GL383557v1_alt 4999 58 + 89672 TTGCGTACAAACTATTAAA--TAAT---------TGAAGAAATTTACAACCAAATGAGACGGACTTTTT s panTro5.chr16 21430975 58 - 81586097 TTGCGTACAAACTATTAAA--TAAT---------TGAAGAAATTTACAACCAAATGAGATGGGCTTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497850 58 - 90481686 TTGCGTACAAACTATTAAA--TAAT---------TGAAGAAATTTACAACCAAATGAGATGGGCTTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730776 57 + 3010529 TTGCATACAAACTATTAAA--TAAT---------TGAAGAAATTTATAACCAAATGAGACGGGC-TTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838281 58 + 163208435 TTGGGTACAAACTATTAAA--TAAT---------TGAAGAAATTTACAACCAAATGAGAGGGGCTTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316883 58 - 74971481 TTGGGTGCAAACTACTAAA--TAAC---------TGAAGAAATTTACAACCAAATGAGAAGGGCTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027880 58 - 78541002 TTGGGTGCAAACTACTAAA--TAAC---------TGAAGAAATTTACAACCAAATGAGAAGGGCTTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422229 58 + 26466322 TTGGGTGCAAACTACTAAA--TAAC---------TGAAGAAATTTACAACCAAATGAGAAGGGCTTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749581 58 + 43916225 TTGGGTGCAAACTACTAAA--TAAC---------TGAAGAAATGTACAACCAAATGAGAGGGGCTTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186192 58 + 75399963 TTGGGTGCAAACTACTAAA--TAAC---------TGAAGAAATTTACAACCAAATGAGAGGGGCTTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735444 58 - 7209941 TTGGGTGCAAACTACTAAA--TAAC---------TGAAGAAATTTACAACCAAATGAGAGGGGCTTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476199 58 + 3907144 TTGGGTGCAAACTACTAAA--TAAA---------TGAAGAAATTTACAACCAAATGAGAGGGGCTTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488426 60 - 44557958 TTGGGTACAAACTATTACATTTAAC---------TGAAGACATTTACAACTAACTGAGAAGGGCTTTTC i calJac3.chr20 I 11 C 0 s saiBol1.JH378225 6300021 42 + 6628207 TTGGGTGCAAACTATTAAATTTTAC---------TGAAGACATTTGCAAC------------------C i saiBol1.JH378225 I 11 C 0 s aotNan1.NW_018500622v1 9239899 60 - 10531588 TTGGGTACAAACTATTAAATTTAAC---------TGAAGACATTTACAACCAAATGAGAAGGGCTTTTC i aotNan1.NW_018500622v1 I 85 C 0 s proCoq1.NW_012152729v1 2906482 53 + 9850184 TTGGGTA----CAAACAAA--TAAC---------TGAAAAAATTTACAACCAAGTGAGAGGGCCCTTC- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649614 57 + 13852661 TTGGATATAAGCAATCAAA--TAAC---------TGAAAAAATTTACAACCAAGTAGGAGAGCACTTT- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430043 65 - 129401213 GTTGGTACAAACCCTTAAG--TACCGGGGGGGGGGGGGGGAAGATACAGCTCAATGAGAGGGTGCTC-- i mm10.chr8 C 0 C 0 s dasNov3.JH569970 890074 58 + 1009443 TCAAGTACACACTATTAAA--TAAC---------TGAAAAAATTTACAATCAAATTAGAGGGCCCTTTC i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3274774 1178 - 5917169 I a score=539466.000000 s hg38.chr16_GL383557v1_alt 5057 45 + 89672 AAATAT-ACTAGAATCA---TATT------CACTGCCTCAGAGAACTGAGTTATT s panTro5.chr16 21431033 45 - 81586097 AAATAT-ACTAGAATCA---TATT------CACTGCCTCAGAGAACTGAGTTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497908 45 - 90481686 AAATAT-ACTAGAATCA---TATT------CACTGCCTCAGAGAACTGAGTTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730833 45 + 3010529 AAATAT-ACTAGAATCA---TATT------CACTGCCTCAGAGAACTGAGTTATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838339 45 + 163208435 AAATAT-ACTAGAATCA---TATT------CATTGCCTCAGAGAACTGAGTTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21316941 45 - 74971481 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027938 45 - 78541002 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422287 45 + 26466322 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749639 45 + 43916225 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186250 45 + 75399963 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735502 45 - 7209941 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476257 45 + 3907144 AAATAT-CCTAGAATCA---CGTT------CACTGCCTCAGAGAACTGAGTTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488486 45 - 44557958 AAATAT-ACTAGAATCA---TATT------CACTGTCTCAGAGACCTAAGTTATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300063 44 + 6628207 AAATAT-ACTATAATCA---TATT------CACTGTCTCAGAGACCTGGGTTA-T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3275952 44 - 5917169 AAATAT-ACTAGAATCA---TATT------CACTGTCTCAGAGACCTGAGTTA-T i cebCap1.NW_016107433v1 I 1178 C 0 s aotNan1.NW_018500622v1 9239959 45 - 10531588 AAATAT-ACTAGAATCA---TATT------CACTGCCTCAGAGAACTGAGTTATT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906535 49 + 9850184 AAATATAACTGGAATCATATTATT------CACTGTCTCAgagatctgagttcat i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649671 49 + 13852661 AAATATAACTTGAATCATATTATT------CACTGTCTCAgaggtctgggttcat i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430108 50 - 129401213 CAATAT-CCCTGGAACA---TAATAAGCACCACTGCCTCAGAGATCTGAGATC-C i mm10.chr8 C 0 C 0 s dasNov3.JH569970 890132 49 + 1009443 AAATCTAACTAGAAGTAAAGTATT------CATTGTCTCAGTAAATTAGATAATT i dasNov3.JH569970 C 0 I 2536 a score=515709.000000 s hg38.chr16_GL383557v1_alt 5102 41 + 89672 TTCTTTCCCCCTCTTGCACTATTACTGACTCATAGCATGGA s panTro5.chr16 21431078 41 - 81586097 TTCTTTCCCCCTCTTGCACTATTACTGACTCACAGCATGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497953 41 - 90481686 TTCTTTCCCCCTCTTGCACTATTACTGACTCACAGCATGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730878 41 + 3010529 TTCTTTCCCCCTCTTGCACTATTACTGACTCACAGCATGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838384 41 + 163208435 TTCTTTTCCCCTCTTGCACTATTACTGACTCATGACATGGA i nomLeu3.chr2 C 0 I 127 s rheMac8.chr20 21316986 41 - 74971481 TTCTTTTCCCCTCTTGCACTATTACTGACTCACAACATGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21027983 41 - 78541002 TTCTTTTCCCCTCTTGCACTATTACTGACTCACAACATGGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422332 41 + 26466322 TTCTTTTCCCCTCTTGCACTATTACTGACTCACAACATGGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749684 41 + 43916225 TTCTTTTCCCCTCTTGCACTATTACTGACTCACAACATGGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186295 41 + 75399963 TTCTTTTCCCCTCTTGCACTATTACTGACTCACAACATGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735547 41 - 7209941 TTCTTTTCCCCTCTTGCACTATTACTGACTCACAACATGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476302 41 + 3907144 TTCTTTTCCTCTCTTGCACTATTACTGACTCATGACATGGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488531 41 - 44557958 TTCTTTCCCCCTCTTGCACTATTACTGACTCACAACATGGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300107 41 + 6628207 TTCTTTCCCCCTCTTGCACTACTACTGACTCACAATATGGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3275996 41 - 5917169 TTCTTTCTCCCTCTTGCACTACTACTGACTCACAACATGGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240004 41 - 10531588 TTCTTTCCCCCTCTTGCACTACTACTGACTCACAATATGGC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906584 41 + 9850184 ttcttttacctgcttgctttgttactggctcactacatgac i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649720 41 + 13852661 ttcttttatctccttgctttagtactgactcactacatgac i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430158 41 - 129401213 TCCCCTCCCTGACCCGCTCTATTACTGACTCATTACCCAAC i mm10.chr8 C 0 C 0 e dasNov3.JH569970 890181 2536 + 1009443 I a score=2435536.000000 s hg38.chr16_GL383557v1_alt 5143 212 + 89672 CTTGAGCAAATTATTTAGTCTCTAGGCTTGTATTCTAATCATATGTGTAGTAATGACTATTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATTCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCAT-ATTCCAGAGATATATTAGAATGTTCTTTGAGTTGA-CATCTCCAGT---------GATCCAGCCATT--A s panTro5.chr16 21431119 212 - 81586097 CTTGAGCAAATTATTTAGTCTCTAGGCTTGTATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATTCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCAT-ATTCCAGAGATATATTAGAATGTTCTTTGAGTTGA-CATCTCCAGT---------GATCCAGCCATT--A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21497994 212 - 90481686 CTTGAGCAAATTATTTAGTCTCTAGGCCTGTATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATTCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCAT-ATTCCAGAGATATATTAGAATGTTCTTTGAGTTGA-CATCTCCAGT---------GATCCAGCCATT--A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 730919 212 + 3010529 CTTGAGCAAATTATTTAGTCTCTAGGCTTGTATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATACTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCAT-ATTCCAGAGATATATTAGAATGTTCTTTGAGTTGA-CATCTTCAGT---------GATCCAGCCATT--A i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21317027 213 - 74971481 CTTAAGCAAATTATTTAGTCTCTAGGTTTATATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATGCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCATAATTTCAGAGATATACTAGAATATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028024 213 - 78541002 CTTAAGCAAATTATTTAGTCTCTAGGTTTATATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATGCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCATAATTTCAGAGATATACTAGAATATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422373 213 + 26466322 CTTAAGCAAATTATTTAGTCTCTAGGTTTATATTCTAATCATATGTGTAGTAATGATTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATGCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCATAATTTCAGAGATATACTAGAATATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749725 213 + 43916225 CTTAAGCAAATTATTTAGTCTCTAGGTTTATATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATGCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCATAATTTCAGAGATATACTAGAATATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186336 213 + 75399963 CTTAAGCAAATTATTTAGTCTCTAGGTTTATATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAGTCATCACATGCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCATAATTTCAGAGATATACTAGAATATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735588 213 - 7209941 CTTAAGCAAATTATTTAGTCTCTAGGTTTATATTCTAATCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAACCATCACATGCTGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGTCTCATAATTTCAGAGATATACTAGAATATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476343 210 + 3907144 CTTAAGCAAATTATTTAGTCTCTAGGTTTGTATTCT--TCATATGTGTAGTAATGACTGTTA-ACTGCCATT---ACATGCACTTAAGATTCTCAGCTAAACATAAATCATCACATGATGCAATACTAT---TTGTTCTGCCTTTGGAGGGACTGCCTCATAATTCCAGA-ATATACTAGAAAATTCTTTGAGTTGA-CATCTCCAGT---------AATCCAGCCATT--A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488572 213 - 44557958 CCTAAGCAAATTATGTAGTCTCTTGGCTTGTGTTATAATCATATATGTAGTAATGACTGTTA-ATTGACATT---ACATGTGCTTAGGATTCTCAGCTAAACACAAATCATCACATACTGCAATACTAT---TTGTTCTGCCTTTGGAGGGATTGACTCATAATTGCAGGGACATATTAGAATACTCTTTGAGTTGA-CATCTCCAGT---------GATCCAGCCATT--A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300148 213 + 6628207 CCTAAGCAAATTATGTAGTCTCTAGGCTTGTGTTATAATCATATGTGTAGTAATGACTGTTA-ATTGCCATT---ACATGGGCTTAGGATTCTCAGCTAAACACAAATCATCACATACTGTAATACTAT---TTGTTCTGCCTTTGGAGGAATTGACTCATAATTCCAGGGACATATTAGAATACTCTTTGAGTCGA-TATCTCCAGT---------GATCCAGCCATT--A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3276037 211 - 5917169 CCTAAGCAAATTATGTAGTCTCTAGGCTTGTGTTATAATC--ACGTGTAGTAATGACTGCTA-ATTGCCATT---ACATGTGCTTAGGATTCTCAGCTAAACACAAATCATCACATACTGCAATACAAT---TTGTTCTGCCTTTGGAGGGATTGACTCATAATTCCAGGGACATATTAGAATACTCTTTGAGTTGA-CATCACCAGT---------GATCCAGCCATT--A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240045 213 - 10531588 CCTAAGCAAATTATGTAGTCTCTAGGCTTGTGTTATAATCATATGTGTAGTAATGACTGTTA-ATTGCCATT---ACATGTGCTTAGGATTCTCAGCTAAACACAAATCATCACATACTGCAATACTAT---TTGTTCTGCCTTTGGAGGGATTGACTTATAATTCCAGGGACATATTAGAATACTCTTTGAATTGA-CATCTCCAGT---------GATCCAGCCATT--A i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906625 214 + 9850184 cttaagcaaattacttaatctttAAGCTTGTATTATAATCATCTTTGTAGTAATGACTGTTATATTGCCATT---ACATGCTCTTAAGATTCTTAGTTAAATATAAATCATCACATACCGCAATACTAT---CTGTTTTGCCTTTGGAGGGAATGCTTCGTAATTCCAGAGGTATATTAGAATACTCTCTGAGTTGA-CATCTCCAGT---------GATACAGCCATT--A i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649761 229 + 13852661 attaagcaaattacttaatctccaagcttgtattataatcatctgtggggtaatgaCTGTTATATTGCTATTATAATATGCTCTTAAAATTCTTAGTTAAATATAAATCATCACATACTGCAATACTAT---CTGTTCTGCCTTTGGAAAGACTGAATCATAATTCCAGAGGTATATAAGAATACTCTGTGAGTTGAGTATACTCAATACTCTTTGAGATGCATCAATTGGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430199 208 - 129401213 CATAAACAAATTACTTAATCTCTAGGCTTGTATTATAATCATCTGT---GTAATGACTGTTATATTGATATT---ACATGCTCTTAAGAGCCTCAGCTAAATGTAAATCACCACACACTGCAGTATCATTACTCATCCAACCTGTGGGGAG---GCCTTATCATT-CAGAGGTATAT--GAATACTCCTTGAATTAA-CATCTGCAGA---------AATCCAGCCATT--A i mm10.chr8 C 0 C 0 e dasNov3.JH569970 890181 2536 + 1009443 I e nomLeu3.chr2 53838425 127 + 163208435 I a score=60384.000000 s hg38.chr16_GL383557v1_alt 5355 5 + 89672 AATTA- s panTro5.chr16 21431331 5 - 81586097 AATTA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498206 5 - 90481686 AATTA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731131 5 + 3010529 AATTA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838552 5 + 163208435 AATTA- i nomLeu3.chr2 I 127 C 0 s rheMac8.chr20 21317240 5 - 74971481 AATTA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028237 5 - 78541002 AATTA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422586 5 + 26466322 AATTA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749938 5 + 43916225 AATTA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186549 5 + 75399963 AATTA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735801 5 - 7209941 AATTA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476553 5 + 3907144 AATTA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21488785 5 - 44557958 AATTA- i calJac3.chr20 C 0 I 305 s saiBol1.JH378225 6300361 5 + 6628207 AATTA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3276248 5 - 5917169 AATTA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240258 5 - 10531588 AATTA- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906839 5 + 9850184 AACTA- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649990 5 + 13852661 AACTA- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430407 6 - 129401213 AACAAA i mm10.chr8 C 0 C 0 e dasNov3.JH569970 890181 2536 + 1009443 I a score=3306433.000000 s hg38.chr16_GL383557v1_alt 5360 265 + 89672 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTTAGGTTATTTAATCTTTCCTAATATCAATCAACTGTAGTTCCATGGTTCATAATATGGTATTTATGGCTAAACAATGAAAAGTTCCTGAACCAGACCTGATGTCTTACAGGTACTGCAAACTTAACAAGTATGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- s panTro5.chr16 21431336 265 - 81586097 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTTAGGTTATTTAATCTTTCCTAATATCAATCAACTGTAGTTCCATGGTTCATAATATGGTATTTATGGCTAAACAACGAAACGTTCCTGAACCAGACCTGATGTCTTACAGGTACTGCAAACTTAACAAGTATGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498211 265 - 90481686 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTTAGGTTATTTAATCTTTCCTAATATCAATCAACTGTAGTTCCATGGTTCATAATATGGTATTTATGGCTAAACAACGAAAAGTTCCTGAACCAGACCTGATGTCTTACAGGTACTGCAAACTTAACAAGTATGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAGTCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731136 265 + 3010529 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTTAGGTTATTTAATCTTTCCTAATATCAATCAACTGTAGTTCCATGGTTCATAATATGGTATTTGTGGCTAAACAATGAAAAGTTCCTGAACCAGACCTGATGTCTTACAGGTACTGCAAACTTAACAAGTATGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53838557 256 + 163208435 ACATCTCCCTATTCCCCAGCTCTTCCATGATG---------TGCCCTGATCTGATTTTCCTTAGGTTATTTAATCTTCCCTAATATCAACCAACTGCAGTTCCATGGTTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGACCTGATGTCTTATGGGTACTGCAAACTTAACAAGTCTGTACTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i nomLeu3.chr2 C 0 I 294 s rheMac8.chr20 21317245 265 - 74971481 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCTTTGATGGTCCTGATCTAATTCTCCTTAAGTTATTTAATCTTTGCTAATATCAACCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGATCTGATGTCTTACAGGTACCGCAAACTCAATAAGTCTGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028242 265 - 78541002 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCTTTGATGGTCCTGATCTAATTCTCCTTAAGTTATTTAATCTTTGCTAATATCAACCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGATCTGATGTCTTACAGGTACCGCAAACTCAATAAGTCTGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422591 265 + 26466322 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCTTTGATGGTCCTGATCTAATTCTCCTTAAGTTATTTAATCTTTGCTAATATCAACCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGATCTGATGTCTTACAGGTACCGCAAACTCAATAAGTCTGTATTAGACACTTGGACGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20749943 265 + 43916225 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCTTTGATGGTCCTGATCTAATTCTCCTTAGGTTATTTAATCTTTGCTAATATCAACCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGATCTGATGTCTTACAGGTACCGCAAACTCAATAAGTCTGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186554 265 + 75399963 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCTTTGATGGTCCTGATCTAATTCTCCTTAGGTTATTTAATCTTTGCTAATATCAACCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGATCTGATGTCTTACAGGTACTGCAAACTCAGTAAGTCTGTATTAGACACTTGGATGGCTAATCCAATAC--CTACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6735806 265 - 7209941 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCTTTGATGGTCCTGATCTAATTCTCCTTAGGTTATTTAATCTTTGCTAATATCAACCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAGATAATGAAAAGTTCCTGAATCAGATCTGATGTCTTACAGGTACCGCAAACTCAATAAGTCTGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476558 265 + 3907144 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTCTCCTTAGGTTATTTAATCTTTGCTAATATCAATCAACTATAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGACCTGATGTCTTACAGGTACCGCAAACTCAGTAAGTCTGTATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489095 265 - 44557958 ACATCTCCCTATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTCAGGTTGTTTAATCTTTCCTAATATCAACCAACTGTAGTTCCATGGTTCATAATATGGTATTTATAGCTAAATAATGAAAAGTTCCTGAATCAGACCTGGTATTTTACAGGTACTACAAACTCAACAAGTTCATATTAGACACTTGTATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i calJac3.chr20 I 305 C 0 s saiBol1.JH378225 6300366 265 + 6628207 ACATCTCCCGATTTCCCAGCTTTTTCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTTGGGTTGTTTAATCTTTCCTAATACCAACCAACTGTAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGACCTGGTATCTTACAGGTACTGCAAACTCAACAAGTCCATATTAGACACTTGGACGGCTAATCCAATAC--CCACTGCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3276253 265 - 5917169 ACATCTCCCGATTCCCCAGCTCTTCCATGATGGCCCTTGATGGTCCTGATCTAATCTTCCTCAGGTTGTTTAATCTTTCCTAATATCAACCAACTGTAGTTCCATGATTCATAATATGGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGACCTGGTATCTTACAGGTACTACAAACTCAACAAGTCCATATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTTTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240263 265 - 10531588 ACATCTCCCTATTCCCCAGATCTTCCATGATGGCCCTTGATGGTCCTGATCTAATTTTCCTCAGGTTGTTTAATCTTTCCTAATATCAACCAACTGTAGTTCCATGATTCATAATATTGTATTTATGGCTAAATAATGAAAAGTTCCTGAATCAGACCTGGTATCTTACAGGTACTGTAAACTCAACAAGTCCATATTAGACACTTGGATGGCTAATCCAATAC--CCACTCCCAATCCTC-CTCTCTCTCC------TATCTAT---CTTCACCAT----------------------------- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2906844 261 + 9850184 ACATCTTTCTTTTCCCCAGCTCCTCCATCATGGCCCTTGATGGTCCCAATTTAATTTTCCTTAGGTCATTCAACCTCTCCTAATATCAACCAAGTGTAGTTCCATGATTCATAATATCATAATCAGGGCTAAATAAGCAAAAGTTCCTGATTCAGATCTGATGTCTTTCAGGTACTGCAAACTCAACAAGTCTATAATAGACACTTGGATAGCAAACCCAACAC--CCATTCC----CAAG-GCTGCTCTCT------TTCCTAT---CTTTACTAT----------------------------- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13649995 252 + 13852661 ACATCTTTCTTTTCTCCATCTCCTCCATCATGGCCCTTGATGATCCCAATTTAATTTTCCTTAGGTCATTTAACCTATCCTAATATCAACCAACCATAGTTCCATGACACATAATATGATAATTAGGGCT---------AAAGTTCCTGATTCAGAGTTGATGTCGTATAGGTACTGC-AACTCAACAAGAGTATAGCAGACACT----TAGCTAACCTTACACTACCATTCC-AGTCCTC-CCCTCTCCCC------TGCCTAT---CTTCATTAT----------------------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430413 275 - 129401213 ACACACCACTTCACCCCAGCTTCTCCAT-ATGGCCCTTGCAGGTACTAATATAATTTCCCTGAAGCCAATTAATCCCCCAGATTATCAACCAACTATAGTTTTGT-----ATAGGACGATAC-----ACTAAATACTGAAGAGCTTCTCCTTCTTACCTGAG----------------AAAATTGGT--GTCCATCGTATACAGTTGACTGCCTCAGCCGGCAC--CTGTTTCTAACCCTCACTCTCCCTGCTCAAGTTAACCATGTACTTCTCTATGTTTTGCCGCAGGCCTGCTGTTAGCCAAT i mm10.chr8 C 0 C 0 e dasNov3.JH569970 890181 2536 + 1009443 I a score=353496.000000 s hg38.chr16_GL383557v1_alt 5625 28 + 89672 AAAGTt------------aaatact---------cacttctccaatgcc s panTro5.chr16 21431601 28 - 81586097 AAAGTt------------aaatact---------cacttctccaatgcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498476 28 - 90481686 AAAGTt------------aaatact---------cacttctccaatgcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731401 28 + 3010529 AAAGTt------------aaatact---------cacttctccaatgcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839107 28 + 163208435 aaaGTt------------aaatact---------cacttctccaatgcc i nomLeu3.chr2 I 294 C 0 s rheMac8.chr20 21317510 28 - 74971481 AAAGTt------------aaatact---------cacttctccaatgcc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028507 28 - 78541002 AAAGTt------------aaatact---------cacttctccaatgcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422856 28 + 26466322 AAAGTt------------aaatact---------cacttctccaatgcc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750208 28 + 43916225 AAAGTt------------aaatact---------cacttctccaatgcc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186819 28 + 75399963 AAAGTt------------aaatact---------cacttctccaatgcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736071 28 - 7209941 AAAGTt------------aaatact---------cacttctccaatgcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476823 28 + 3907144 AAAGTt------------aaatact---------cacttctccaatgcc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489360 28 - 44557958 AAAGTt------------aaatact---------catttatccaatgcc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300631 28 + 6628207 AAAGTT------------AAATACT---------CATTTATCCAATGCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3276518 28 - 5917169 AAAGTT------------AAATACT---------CATTTATCCAATGTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240528 28 - 10531588 AAAGTt------------aaatact---------catttatccaatgcc i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2907105 28 + 9850184 GAAGCT------------AAATACT---------CACTTCTCCAATCTC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13650247 37 + 13852661 AAAGCT------------AAACACTTCAATTAAATACTTCTCCAATCTC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22430688 40 - 129401213 AAGGATATTTTATTAAGAAAGCACT---------TACTCCTTCTCTACC i mm10.chr8 C 0 I 139 e dasNov3.JH569970 890181 2536 + 1009443 I a score=249694.000000 s hg38.chr16_GL383557v1_alt 5653 19 + 89672 ccttgcagttactggtaac s panTro5.chr16 21431629 19 - 81586097 ccttgcagttactggtaac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498504 19 - 90481686 ccttgcagttactggtaac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731429 19 + 3010529 ccttgcagttactggtaac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839135 19 + 163208435 ccttgcagttactggtaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21317538 19 - 74971481 ccttgcagttactggtaac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028535 19 - 78541002 ccttgcagttactggtaac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422884 19 + 26466322 ccttgcagttactggtaac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750236 19 + 43916225 ccttgcagttactggtaac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186847 19 + 75399963 ccttgcagttactggtaac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736099 19 - 7209941 ccttgcagttactggtaac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476851 19 + 3907144 ccttgcagttactggtaac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489388 19 - 44557958 ccttgcagttactggtaac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300659 19 + 6628207 CCTTGCAGTTACTGGTAAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3276546 19 - 5917169 CCTTGCAGTTACTGGTAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240556 19 - 10531588 ccttgcagttactggtaac i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2907133 19 + 9850184 CCTTGCCATTACTGGAAGC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13650284 19 + 13852661 TCTTCCAGTTCTTAGTAGC i otoGar3.GL873566 C 0 C 0 e mm10.chr8 22430728 139 - 129401213 I e dasNov3.JH569970 890181 2536 + 1009443 I a score=512826.000000 s hg38.chr16_GL383557v1_alt 5672 49 + 89672 cattccact-agttatggccaacaagatgtaagctaaaatctgtaagggg s panTro5.chr16 21431648 49 - 81586097 cattccact-agttatggccaacaagatgtaagctaaaatctgtaagggg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498523 49 - 90481686 cattccact-agttatggccaacaagatgtaagctaaaatctgtaagggg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731448 49 + 3010529 cattccact-agttatggccaacaagatgtaagctaaaatctgtaagggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839154 49 + 163208435 cattcaact-agttacggccaacaagatgtaagctaaaatctgtaagggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21317557 49 - 74971481 cattcaact-agttacggccaacaagatgtaagctaaaatctgtaagggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028554 49 - 78541002 cattcaact-agttacggccaacaagatgtaagctaaaatctgtaagggg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422903 49 + 26466322 cattcaact-agttacggccaacaagatgtaagctaaaatctgtaagggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750255 49 + 43916225 cattcaact-agttacggtcaacaagatgtaagctaaaatctgtaagggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186866 49 + 75399963 cattcaact-agttacggccaacaagatgtaagctaaaatctgtaagggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736118 49 - 7209941 cattcaact-agttacggccaacaagatgtaagctaaaatctgtaagggg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476870 49 + 3907144 cattcaact-agttacggccaataagatgtaagctaaaatctgtaagggg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489407 49 - 44557958 cattcaacc-agttatggtcaacaagatataagttgaaatctgtaaaggg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3276565 49 - 5917169 CATTCAACC-AGTTACGGTCAACAAGATGTAAGCTGAAATCTGTAAAGGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240575 49 - 10531588 cattcaacc-agttacggtcaacaacatgtaagctgaaatctgtaaaggg i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2907152 50 + 9850184 CACTGGACTCCATTCTGGCCAATAAGATACAAGCTGAAATCTGCTGGAGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13650303 49 + 13852661 CATTGGACT-CACTCTGGCTAACAAGATACAAGCTGAAATCTGCTAGAGG i otoGar3.GL873566 C 0 C 0 e mm10.chr8 22430728 139 - 129401213 I e dasNov3.JH569970 890181 2536 + 1009443 I e saiBol1.JH378225 6300678 0 + 6628207 C a score=236571.000000 s hg38.chr16_GL383557v1_alt 5721 20 + 89672 catctgggaaagcttttctt s panTro5.chr16 21431697 20 - 81586097 catctgggaaagcttttctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498572 20 - 90481686 catctgggaaagcttttctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731497 20 + 3010529 catctgggaaagcttttctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839203 20 + 163208435 catctaggaaagcttttctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21317606 20 - 74971481 catctgggaaagcttttctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028603 20 - 78541002 catctgggaaagcttttctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422952 20 + 26466322 catctgggaaagcttttctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750304 20 + 43916225 catctgggaaagcttttctt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186915 20 + 75399963 catctgggaaagcttttctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736167 20 - 7209941 catctggcaaagcttttctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476919 20 + 3907144 catctgggaaagcttttctt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489456 20 - 44557958 catctgggaaagctttcctc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3276614 20 - 5917169 CATATGGGAAAGCTTTCCTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240624 20 - 10531588 catctgggaaagctttcctc i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2907202 20 + 9850184 AACAGGGGAAAGCCTTTCTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13650352 20 + 13852661 TATTGGGGAAAGCCTTTCTT i otoGar3.GL873566 C 0 I 10384 s mm10.chr8 22430867 20 - 129401213 cagctGGGAAAGCATCTCTT i mm10.chr8 I 139 C 0 e dasNov3.JH569970 890181 2536 + 1009443 I e saiBol1.JH378225 6300678 0 + 6628207 C a score=2044274.000000 s hg38.chr16_GL383557v1_alt 5741 197 + 89672 gataaagaggacagacccaaccagtatctttccctttccccttcttcctgctttgaatTTATGCCTCAAGGCAGCTTTGGATAAGATGTCTGGAGTTGCAATCATGAGATAAACAACCTTATTATGAATAACAGAACAAACATGATTATCATAGAGTGCTGCATCAGTCCTAAAAGAGTCTACCTTCAGACCTCTTA s panTro5.chr16 21431717 197 - 81586097 gataaagaggacagacccaaccagtatctttccctttccccttcttcctgctttgaatTTATGCCTCAAGGCAGCTTTGGATAAGATGTCTGGAGTTGCAATCATGAGATAAACAACCTTATTATGAATAACAGAACAAACATGATTATCATAGAGTGCTGCATCAGTCCTAAAAGAGTCTACCTTCAGACCTCTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498592 197 - 90481686 gataaagaggacagacccaaccagtatctttccctttccccttcttcctgctttgaatTTATGCCTCAAGGCAGCTTTGGATAAGATGTCTGGAGTTGCAATCATGAGATAAACAACCTTATTATGAATAACAGAACAAACATGATTATCATAGAGTGCTGCATCAGTCCTAAAAGAGTCTACCTTCAGACCTCTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731517 197 + 3010529 gataaggaggacagacccaaccagtatctttccctttccccttcttcctgctttgaatTTATGTCTCAAGGCAGCTTTGGATAAGATGTCTGGAGTTGCAATCATGAGATAAACAACCTTATTATGAATAACAGAACAAACATGATTATCATAGAGTGCTGCATCAGTCCTAAAAGAGTCTACCTTCAGACCTCTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839223 196 + 163208435 gataaagagaacagacccaaccagtatctttccctttgcccttcttcctgctttgaatttatgcctcaaggcagctttggatatgatgtctggagttgcaaccatGAGATAAACAACCTTATTATGAATAACAGAACAAACATGA-TATCATAGAGTGCTGCATCAGTCCTAAAAGAGTCTACCTTCAGACCTCTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21317626 194 - 74971481 gataaagagaacagacccaaccagtatctttccctttccctttcttcctgctTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATATTTGGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGA-TATCATAGAGTGCTGCACCAGTCCT--AAGAGTCTACCTTCAGACCTCTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028623 194 - 78541002 gataaagagaacagacccaaccagtatctttccctttccctttcttcctgctTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATATTTGGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGA-TATCATAGAGTGCTGCACCAGTCCT--AAGAGTCTACCTTCAGACCTCTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14422972 194 + 26466322 gataaagagaacagacccaaccagtatctttccctttccctttcttcctgctTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATATTTGGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGA-TATCATAGAGTGCTGCACCAGTCCT--AAGAGTCTACCTTCAGACCTCTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750324 194 + 43916225 gataaagagaacagacccaaccagtatctttccctttccccttcttcctGCTTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATATTTGGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGA-TATCATAGAGTGCTGCACCAGTCCT--AAGAGTCTACCTTCAGACCTCTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58186935 194 + 75399963 gataaagagaacagacccaaccagtatctttccctttccccttcttcctGCTTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATATTTGGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGA-TATCATAGAGTGCTGCACCAGTCCT--AAGGGTCTACCTTCAGACCTCTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736187 194 - 7209941 gataaagagaacagacccaaccagtatctttccctttccccttcttcctGCTTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATATTTAGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGA-TATCATAGAGTGCTGCACCAGTCCT--AAGAGTCTACCTTCAGACCTCTTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 476939 196 + 3907144 gataaagagaacagacccaaccagtatctttccctttccccttcttcctGCTTTGAATTTATGCCTCAAGGCAGCTTTGGATATGATATTTGGAGTTGCAACTATGAGATAAACAACCTTATTATGAATAACAGAACAAAGATGG-TATCATAGAGTGCTGCACCAGTCCTAAAAGAGTCTACCTTCAGACCTCTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489476 196 - 44557958 aagaaagagaacagacacaaccagtatctttccctttccccttcttccggctTTGAATTTTTATCTCAAGGCAGCTTTGGATATGATGTCTGGAGTTGCAACCATGAGATAAACAACCTTATTACGAATAACAGTACAAACATGA-TATCATAGAGTGCTGCATCAGTCCTGGAAGAGTCTACCTGCAGACCTCTTA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3276634 196 - 5917169 AATAAAGAGAACAGACCCAACCAGTATCATTCCCTTTCCCCTTCTTCCTGCTTTGAATTTATGTCTCAAGGCAGCTTTGGATATGATGTCTGGAGTTGCAACCATGAGATAAACAACCTTATTATGAATAACAGTACAAACATGG-TATCATAGAGTGCTGCATCTGTCCTGGCAGAGTCTACCGGCAGACCTCCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240644 183 - 10531588 aataaagagaacagacccaaccagtttctttccctttccccttcctcctgctttgaatttatgtctcaaggcagctctggatatgatgtctggagttgcaaccatGAGATAAACAAC-------------ACAGTACAGATATGA-TATCATAGAGTGCTGCATCAGTCCTGGAAGAGTCTACCTGCAGACCTCTTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2907222 196 + 9850184 GATTAAGAGAACAGATCCAGCCAGCATCTTTCCCTTTCCCTTTCTACCTTCCTTGAATTTATGTCTCAAGGCAGCTTTAGATATGATGTCTGCAGTTGCAACCATGAGATAAATGAACTTATTGTGAATAATAGAACAAATATGA-CATAACAGAGTACTGTATCAGTCCTAAAAGAGcttaccttcagacagctta i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22430887 185 - 129401213 GATACAGAGAACAGATCCCACCAGCAACTCCTCTTTTATTCTACCTCCAGC-------TTACATCTCAAGGCAGCTTTAGATATG---TCAGAACCTACAACTATAATACAAATAGACTCACCACAAATAACATAACAAACATGA-CATCATGAGGTATTGCTTCAGTCCTTTAAGAACCTA-CTTCAGACCTCTTA i mm10.chr8 C 0 I 1483 e dasNov3.JH569970 890181 2536 + 1009443 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=207522.000000 s hg38.chr16_GL383557v1_alt 5938 21 + 89672 TGATTTGAGATTTTAAAAAAT s panTro5.chr16 21431914 21 - 81586097 TGATTTGAGATTTTAAAAAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498789 21 - 90481686 TGATTTGAGATTTTAAAAAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731714 21 + 3010529 TGATTTGAGATTTTAAAAAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839419 21 + 163208435 TGATTTGAGATTTTAAAAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21317820 21 - 74971481 TGATTTGAGATTTAAAAAAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21028817 21 - 78541002 TGATTTGAGATTTAAAAAAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423166 21 + 26466322 TGATTTGAGATTTAAAAAAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750518 21 + 43916225 TGATTTGAGATTTAAAAAAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187129 21 + 75399963 TGATTTGAGATTTAAAAAAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736381 21 - 7209941 TGATTTGAGATTTAAAAAAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477135 21 + 3907144 TGATTTGAGATTTAAAAAAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21489672 21 - 44557958 TAATTTGAGATTTTAAAAAAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3276830 21 - 5917169 TAATTTGAGATTTTAAAAAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9240827 21 - 10531588 TAATTTGAGATTTTAAAAAAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2907418 21 + 9850184 tgatatgagattttataaaat i proCoq1.NW_012152729v1 C 0 I 2614 e mm10.chr8 22431072 1483 - 129401213 I e dasNov3.JH569970 890181 2536 + 1009443 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=2134250.000000 s hg38.chr16_GL383557v1_alt 5959 276 + 89672 TGTTTGTAACAggccaggcacagtgactcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaacattagccgggtgtggtggcaggcgcctgtaatcccagctactcgtgaggc---tgaggcaggagaatggcgtgaacct-gggaggcagagcttgcagtgagccgagatcgtgccactgcactccagcctgggcaacaa s panTro5.chr16 21431935 276 - 81586097 TGTTTGTAGCAggccgggcacagtgactcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaacattagccgggtgtggtggcgggcgcctgtagtcccagctactcgtgaggc---tgaggcaggagaatggcgtgaacct-gggaggcagagcttgcagtgagccgagatcgtgccactgcactccagcctgggcaacaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21498810 276 - 90481686 TGTTTGTAGCAggccgggcacagtgactcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcaagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaacattagccgggtgtggtggcgggcgcctgtagtcccagctactcgtgaggc---tgaggcaggagaatggcgtgaacct-gggaggcagagcttgcagtgagccgagatcgtgccactgcactccagcctgggcaacaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 731735 276 + 3010529 TGTTTGTAGCAggccgggtacagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcac--gaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaacattagccgggtgtggtggcaggcgcctgtagtcccagctactcatggggc---tgaggcaggagaatggcgtgaacct-gggaggcagagcttgcagtgagccgagatcgtgccactgcactccagcctgggcaacaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839440 276 + 163208435 TATTTGTAGCAggccaggcacagtgactcatccctgtaatcccagcactttgggaggctgaggcgagtggctcat--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctacttgggaggc---tgaggcaggagaatggcgtgaacct-gggaggcagagcttgcagtgagccaagatcttgccactgcactccagcctgggcaacaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21317841 276 - 74971481 TATTTGTAGCAggctgggcacggtggctcatgcctataatcccagtactttgggaggctgtggtgggttgatcacctgaggtcaagagttcaaaaccagccaggccaacacagcaaaatcccatctctactaaaaatacaaaa-atcagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaattgcttgaa-ct-aggaggtggaggtcgcagtgagccaagatggcaatactgcactccagcctgggtgacaa i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21028838 276 - 78541002 TATTTGTAGCAggctgggcacggtggctcatgcctataatcccagtactttgggaggctgtggtgggttgatcacctgaggtcaagagttcaaaaccagccaggccaacacagcaaaatcccatctctactaaaaatacaaaa-attagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaattgcttgaa-ct-aggaggtggaggtcgcagtgagccaagatggcaatactgcactccagcctgggtgacaa i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14423187 276 + 26466322 TATTTGTAGCAggctgggcacggtggctcatgcctataatcccagtactttgggaggctgtggtgggttgatcacctgaggtcaagagttcaaaaccagccaggccaacacagcaaaatcccatctctactaaaaatacaaaa-attagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaactgcttgaa-ct-aggaggtggaggtcgcagtgagccaagatggcaatactgcactccagcctgggtgacaa i macNem1.NW_012011355v1 C 0 I 35 s cerAty1.NW_011999143v1 20750539 276 + 43916225 TATTTGTAGCAggctgggcacagtggctcatgcctataatcccagtactttgggaggctgtggtgggttgatcacctgaggtcaagagttcaaaaccagccaggccaacacagcaaaaccccatctctactaaaaatacaaaa-attagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaattgcttgaa-ct-gggaggtgaaggtcgcagtgagccaagatggcaccactgcactccagcctgggtgacaa i cerAty1.NW_011999143v1 C 0 I 35 s chlSab2.chr5 58187150 276 + 75399963 TATTTGTAGCAAgctgggcacagtggctcatgcctataatcccagtactttgggaggctgtggtgggttgatcacctgaggtcaagagttcaaaaccagccaggccaacacagcaaaaccccatctctactaaaaatacaaaa-attagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaattgcttgaa-ct-gggaggcggaggttggagtgagccaagatggcaccactgcactccagcctgggtgacaa i chlSab2.chr5 C 0 I 35 s manLeu1.NW_012101698v1 6736402 276 - 7209941 TATTTGTAGCAggctgggcacagtggctcatgcctataatcccagtactttgggaggctgtggtgggttgatcacctgaggtcaagagttcaaaaccagccaggccaacacagcaaaaccccatctctactaaaaatacaaaa-attagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaactgcttgaa-ct-gggaggtggaggtcgcagtgagctaagatggcaccactgcactccagcctgggtgacaa i manLeu1.NW_012101698v1 C 0 I 35 s colAng1.NW_012123265v1 477156 276 + 3907144 TATTTGTAGCAggctgggcacagtggctcatgcctataatcccagtactttgggagactgtggtgggttgatcacctgaggtcaagagttcaaaatcagtcaggccaacacagcaaaaccccatctctactaaaaatacaaaa-attagatgggcatggtggcaggcacctgtaatcccagctacttgggaggc---tgaggcaggagaattgcttgaa-ct-gggaggcggaggtcgcagtgagccaagatggcaccactgcactctagcctgggtgacaa i colAng1.NW_012123265v1 C 0 I 24 s calJac3.chr20 21489693 278 - 44557958 TATGTGTAGCAggccaggcatggtggctcatgcctgtaat--cagcactttgagaagccgaggtgggtggatgacctgagatcaggagttcaagacaagccaggccaacatagtgaaaccccatctctactaaaaatacaaaa-attagatgggcatggtggctggtgcctctaatcccagctattcaggaggctgatgaggcaggggaatcgcttgaaacc-gggaggcggaggtcacggtaagccaagaccatgtcattccactccagcctgggtgataa i calJac3.chr20 C 0 I 1 s cebCap1.NW_016107433v1 3276851 278 - 5917169 TATGTGTAGCAggccagacacagtggctcatgcctgtaat--cagcactttgagaggccgaggcgggtggatgacctgaggtcaggagttcaagacaagccaggccaacatagtgaaaccccatctcttctaaaaatataaaa-attagatgggcatggtggcaggtgcctctaatcccagctattcaggaggatgatgaggcaggggaattgcttgaaatc-ggggggcggaggtcacagtgagccaagaccatgtcactccactccagcctgggtgataa i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9240848 279 - 10531588 TACGTGTAGCAggccaggcacggtggctcatgcctgtaat--cagcactttgagaggccgaggcgggttgatgacctgaggtcaggagttcaagacaagccaggccaacatagtgaaaccccatctctactaaaaatataaaa-attagacgggcatggtggcaggtgcctctaatcccagctattcaggaggctgatgaggcaggggaattgcttgaaaccgggggggcggaggtcacagtgagccaagaccatgtcactccactccagcctgggtgataa i aotNan1.NW_018500622v1 C 0 I 1 e mm10.chr8 22431072 1483 - 129401213 I e proCoq1.NW_012152729v1 2907439 2614 + 9850184 I e dasNov3.JH569970 890181 2536 + 1009443 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=35988.000000 s hg38.chr16_GL383557v1_alt 6235 19 + 89672 agtgatact--------------------ccat-------------ctcaag s panTro5.chr16 21432211 19 - 81586097 agtgagact--------------------ccat-------------ctcaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499086 19 - 90481686 agtgagact--------------------ccat-------------ctcaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732011 19 + 3010529 agtgagact--------------------ccat-------------ctcaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839716 19 + 163208435 agcaagact--------------------ccat-------------ctcaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318118 35 - 74971481 agcaaaactnnnnnnnnnnnnnnnnnnnn-----------------cccaaa i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21029115 32 - 78541002 agcaaaact--------------------ctatccccccccccccccccaaa i macFas5.chr20 I 1 C 0 s calJac3.chr20 21489972 19 - 44557958 agcaaaact--------------------ccat-------------ctcaaa i calJac3.chr20 I 1 C 0 s cebCap1.NW_016107433v1 3277130 19 - 5917169 tgcagaact--------------------ccat-------------ctcaaa i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9241128 19 - 10531588 agcaaaaca--------------------ccat-------------ctcaaa i aotNan1.NW_018500622v1 I 1 C 0 e mm10.chr8 22431072 1483 - 129401213 I e proCoq1.NW_012152729v1 2907439 2614 + 9850184 I e dasNov3.JH569970 890181 2536 + 1009443 I e macNem1.NW_012011355v1 14423463 35 + 26466322 I e colAng1.NW_012123265v1 477432 24 + 3907144 I e manLeu1.NW_012101698v1 6736678 35 - 7209941 I e chlSab2.chr5 58187426 35 + 75399963 I e cerAty1.NW_011999143v1 20750815 35 + 43916225 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=-1763.000000 s hg38.chr16_GL383557v1_alt 6254 22 + 89672 aaaaaaaaaaaaagaa----gaagaa s panTro5.chr16 21432230 23 - 81586097 aaaaaaaaaaaaaaaa---agaagaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499105 19 - 90481686 gaaaaaaaaaaaa-------gaagaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732030 22 + 3010529 aaaaaaaaaaaaaaaa----gaagaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839735 26 + 163208435 aaaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318153 6 - 74971481 aaaaaa-------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029147 6 - 78541002 aaaaaa-------------------- i macFas5.chr20 C 0 C 0 s colAng1.NW_012123265v1 477456 16 + 3907144 aaaaaagaaaagaaaa---------- i colAng1.NW_012123265v1 I 24 C 0 s calJac3.chr20 21489991 13 - 44557958 aaaaaaaagaaaa------------- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3277149 11 - 5917169 aaaaaaa--gaaa------------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241147 8 - 10531588 aaagaga-----a------------- i aotNan1.NW_018500622v1 C 0 C 0 e mm10.chr8 22431072 1483 - 129401213 I e proCoq1.NW_012152729v1 2907439 2614 + 9850184 I e dasNov3.JH569970 890181 2536 + 1009443 I e macNem1.NW_012011355v1 14423463 35 + 26466322 I e manLeu1.NW_012101698v1 6736678 35 - 7209941 I e chlSab2.chr5 58187426 35 + 75399963 I e cerAty1.NW_011999143v1 20750815 35 + 43916225 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=98599.000000 s hg38.chr16_GL383557v1_alt 6276 12 + 89672 gaaaaG-AAAATG s panTro5.chr16 21432253 12 - 81586097 gaaaAG-AAAATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499124 12 - 90481686 gaaaag-aaAATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732052 13 + 3010529 gaaaaGAAAAATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839761 12 + 163208435 gaaaag-aaaaTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318159 12 - 74971481 gaaaag-aaaaTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029153 12 - 78541002 gaaaag-aaaaTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423498 12 + 26466322 gaaaag-aaaaTT i macNem1.NW_012011355v1 I 35 C 0 s cerAty1.NW_011999143v1 20750850 12 + 43916225 gaaaag-aaaaTT i cerAty1.NW_011999143v1 I 35 C 0 s chlSab2.chr5 58187461 12 + 75399963 gaaaag-aaaaTT i chlSab2.chr5 I 35 C 0 s manLeu1.NW_012101698v1 6736713 12 - 7209941 gaaaag-aaaaTT i manLeu1.NW_012101698v1 I 35 C 0 s colAng1.NW_012123265v1 477472 12 + 3907144 gaaaag-aaaaTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490004 12 - 44557958 gagaag-aaaaGT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3277160 12 - 5917169 gaaaag-aaaaGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241155 12 - 10531588 gaaaag-aaaaGT i aotNan1.NW_018500622v1 C 0 C 0 e mm10.chr8 22431072 1483 - 129401213 I e proCoq1.NW_012152729v1 2907439 2614 + 9850184 I e dasNov3.JH569970 890181 2536 + 1009443 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=15300.000000 s hg38.chr16_GL383557v1_alt 6288 1 + 89672 G s panTro5.chr16 21432265 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499136 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732065 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839773 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318171 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029165 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423510 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750862 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187473 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736725 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477484 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490016 1 - 44557958 G i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3277172 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241167 1 - 10531588 G i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54897199 1 + 72247402 G i micMur3.chr20 N 0 C 0 s proCoq1.NW_012152729v1 2910053 1 + 9850184 G i proCoq1.NW_012152729v1 I 2614 C 0 s dasNov3.JH569970 892717 1 + 1009443 G i dasNov3.JH569970 I 2536 C 0 e mm10.chr8 22431072 1483 - 129401213 I e saiBol1.JH378225 6300678 0 + 6628207 C e otoGar3.GL873566 13650372 10384 + 13852661 I a score=197017.000000 s hg38.chr16_GL383557v1_alt 6289 14 + 89672 AACCATCAATGCTT s panTro5.chr16 21432266 14 - 81586097 AACCATCAGTGCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499137 14 - 90481686 AACCATCAGTGCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732066 14 + 3010529 AACCATCAATGCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839774 14 + 163208435 AACCATCCATGCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318172 14 - 74971481 AACCATCAATGCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029166 14 - 78541002 AACCATCAATGCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423511 14 + 26466322 AACCATCAATGCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750863 14 + 43916225 AACCATCAATGCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187474 14 + 75399963 AACCATCAATGCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736726 14 - 7209941 AACCATCAACGCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477485 14 + 3907144 AACCATCAATGCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490017 14 - 44557958 AACCATCAATGCTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3277173 14 - 5917169 AACCATCAATGCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241168 14 - 10531588 AACCATCAATGTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54897200 14 + 72247402 AACCATAAATGCTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2910054 14 + 9850184 AACCATAAATGCTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13660756 14 + 13852661 AATCATTAATGCTT i otoGar3.GL873566 I 10384 C 0 s dasNov3.JH569970 892718 14 + 1009443 AACCACCAATGCTC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22431072 1483 - 129401213 I e saiBol1.JH378225 6300678 0 + 6628207 C a score=1441906.000000 s hg38.chr16_GL383557v1_alt 6303 103 + 89672 TGAAAACATCAAAGAATACTGTCATTTTAGAACTATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATATTCTTGTCAAGTAATATTAAGTTAATACTATAGAG s panTro5.chr16 21432280 103 - 81586097 TGAAAACATCAAAGAATACTGTCATTTTAGAACTATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATTTTCTTGTCAAGTAATATTAAGTTAATACTATAGAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499151 103 - 90481686 TGAAAACATCAAAGAATACTGTCATTTTAGAACTATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATTTTCTTGTCAAGTAATATTAAGTTAATACTATAGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732080 103 + 3010529 TGAAAACATCAAAGAATACTGTCATTTTAGAACTATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATATTCTTGTCAAGTAATATTAAGTTAACACTATAGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839788 98 + 163208435 TGAAAACATCAAATAATACTGTCATTTTAGAACCATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATATTCTTGTCAGGTAATA-----TTAATACTATAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318186 103 - 74971481 TGAAAACATCAAACAATATTGTAATTTTAGAACTACCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTCGTGAAGTAATATTAAATTAATACTATAGAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029180 103 - 78541002 TGAAAACATCAAACAATATTGTAATTTTAGAACTACCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTCGTGAAGTAATATTAAATTAATACTATAGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423525 103 + 26466322 TGAAAACATCAAACAATATTGTAATTTTAGAACTATCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTCGTCAAGTAATATTAAATTAATACTATAGAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750877 103 + 43916225 TGAAAACATCAAACAATATTGTAATTTTAGAACTATCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTCGTCAAGTAATATTAAATTAATACTATAGAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187488 103 + 75399963 TGAAAACATCAAACAATATTGTAATTTTAGAACTATCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTCGTCAACTAATATTAAGTTAATACTATAGAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736740 103 - 7209941 TGAAAACATCAAACAATATTGTAATTTTAGAACTATCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTCGTCAAGTAATATTAAATTAATACTATAGAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477499 97 + 3907144 TGAAAACATCAAACAATATTGTAATTTTAGAACTATCTAT---------------A-TTAATTCCAAAATTCCATGACAAATATTCTTGTCAAGTAATA-----TTAATACTGTAGAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490031 98 - 44557958 TGAAAACATCAAAGAATATTGTCAATTTAGAAGCATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATATTCTTGTCAAGTAATA-----TTAATACTATAGAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300678 103 + 6628207 TGAAGACATCAAAGAATATTGTCATTTTAGAAGCATCTAC---------------CTTTAATTCCAAAATTCCATAACAAATATTCCTGTCAAGTAATATTAAGTTAATACTATAGAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277187 103 - 5917169 TGAAAACATCAAAGAATATTGTCATTTTAGAAGCATCTAC---------------ATTTAATTCCAAAATTCCATGACAAATATTCCTGTCAAGTAATATTAAGTTAATACTATAGAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241182 103 - 10531588 TGAAAACATCAAAGAATATTGTCATTTTAGAAGCATCTAC---------------ATTTAATTCCAAAATTTCATGACAAATATTCTTGTCAAGTAATATTAAGTTAATACTATAGAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54897214 103 + 72247402 TGACGAAACCAAAGAATACTGTTGTTCTAGCAGCATCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTTGTCAAATAATATTAAGGTAATACTACAGAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2910068 103 + 9850184 TGACGAAACCAAAGAATACTGTTGTTCTAGCAGCATCTAT---------------ATTTAATTCCAAAATTCCATGACAAATATTCTTGTCAAATATTATTAAGGTAATACTACAGAG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13660770 116 + 13852661 TGATG-AACTAAAGAATATTGTC-CTCTAAGAGCATCTACTGTTTTGTTTTGGAATTTTAATTCCAAAATTCCAAGACAAATATTTGTGTCAAATAATATTAAGGTAATGCTACAGAG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80424811 78 + 88915250 TGACAAAACTGAAAAATACCATCATTCCAGAGGTATCTAC---------------ATTTAATTCCAAAATTCCAT-------------------------TAAGGTAATATTGTAGAG i canFam3.chr5 N 0 C 0 s dasNov3.JH569970 892732 98 + 1009443 TGCTCAAACCAAAGAACAGTGCT-TTCTAGAATCATCTAT-------------------AATTCCAAAATCTCATAACAAATGTTCTTGTTAAACAATATTAAAGTAATACTACAGAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22431072 1483 - 129401213 I a score=4454284.000000 s hg38.chr16_GL383557v1_alt 6406 258 + 89672 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA s panTro5.chr16 21432383 258 - 81586097 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499254 258 - 90481686 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTTCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732183 258 + 3010529 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCACGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAACAAAATAACTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53839886 259 + 163208435 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCCAAATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCAGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGCTTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTTTAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318289 258 - 74971481 CAGCTTTGGATATGTGGAAATTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAAAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029283 258 - 78541002 CAGCTTTGGATATGTGGAAATTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAAAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423628 258 + 26466322 CAGCTTTGGATATGTGGAAATTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAAAAAGATTCACCAGTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20750980 257 + 43916225 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTT-AATTACCATACTTAGAGAAGATTAATGAAATAACTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187591 258 + 75399963 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATACAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6736843 258 - 7209941 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477596 258 + 3907144 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACTGACAGCC-AATATGTG-TTAATATTAGCTTCCTATAATCAGTAAGCATGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACCCAAATATAGCCTAGTTAAATTACCATACTTAGAGAAGATTAATGAAATAACTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490129 259 - 44557958 CAGCTTTGGATAGGTAAAAGTTTGCCCTTGCAACGGACAGCC-AGTATGTG-TTAATATTAGCTTTCTATAATCAGTGAGAGTGCTTATCCTATGATTATATTTATCTTTATGCATGCTAAATCCT--CCTCTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CATATACATGAATTATAGAGCTATACTC-AATATAGTCTAGTTAAATTACCATACTTAGAGAAGATTAACAAAACAACTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6300781 257 + 6628207 CAGCTTTGGATACGTGGAAGTTTGCCCTTGCAACGGACAGCC-AGTATGTG-TTAATATTAGCTTTCTATAATCAGTGAGAGTGCTTATCCTGTGATTATATTTATCTTTATGCGTGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGGAGAAAGATTCACCACTATGAT-A--------CATATACATGAATTATAGAGCTATACTC-AATATAGTCTAGTTAAATTACCATACTTAGAGAAGATTAACGAAACAACTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277290 257 - 5917169 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCAACGGACAGCC-AGTATGTG-TTAATATTAGCTTTCTATAATCAGTGAGAGTGCTTATCCTGTGATTATATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCGCTATAAT-A--------CATATACATGAATTATAGAGCTATACTC-AATATAGTCTAGTTAAATTACCATACTTAGAGAAGATTAACAAAACAACTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241285 253 - 10531588 CAGCTTTGGATACGTGGAAGTTTGCCCTTGCAACGGACAGCC-AGTATGTG-TTAATATTAGCTTTCTATAATCAGTGAGAGTGCTTATCCTGTGATTATATTTATCTTTATGCATGTTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGAAGAAAGATTCACCACTATAAT-A--------CACATACATGAATTATAGAGCTATACTC-AATATAGTC----TAAATTACCATACTTAGAGAAGATTAACGAAACAACTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54897317 255 + 72247402 CAGCTTTGGATACGTGG-AGTTTGCCCTTGCAACTGACAGCC-AA-TTGTG-TTAATATTAGCCTCCTGCGATCAGTAAGAGTGCTTATCCTGAGATTATATTCGTCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTGGAGATTATTCTAGGAAAGGAGAAAGACTCACCAGTGTAAT-A--------AATACATATGAATTACAGAGCTATATTC-AACATAGCCTAAATAAAATGCCATATTTAGGGAAGATTAATAAAATAGCTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2910171 257 + 9850184 CAGCTTTGGATATGTGGAAGTTTGCCCTTGCCATTGACAGCC-AATTTGTG-TTAATATTAGCCTCGTGTAATCAGTAAAACTGCTTATCCTGAGATTATATTTGTCTTTATGCATGCTAAATCCT--C--CTCTCTCTCCTAGAGATTATTCTAGGAAAGGAGAAAGACTCACCAGTGTAAT-A--------AATACACATGAATTACAGAGCTATACTC-AATATAGCCTAAATAAAATGCCATATTTAGGGAAGATTAATAAAATAGCTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13660886 256 + 13852661 CAGCTCTGGATATATGGAAATTTGTCCTTGCAATTGACAGCC-AATTTATG-TTAATATTAGCTTCCTGTAATCAGTAAGAGTGCTTATCCTGAGATTATATTTATCTTTATGCACACTAAATCCT--C--CTCTCTCTCCTAGAGATTATTCTAGGAAAGGAGAAAGACTAACCAGTGTAAT-ATTACTAAGTACATATATGAATTACAAAG------TC-GATATAGCCTAAATAAAATG---TATTAAGGGAAAATTAACAAAATAGGTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22432555 252 - 129401213 caactCTGGATGTGTGGGAGTTTGTCCTTG-----GACAGCC-CGTTTGTG-TTAGTATCAGCATCTTAGAATCAGTAAGAGTGCTTATCCAGAGATTATATTTATCTCTGTGCATGGCAAATCCT--C--CTCTGCTTCCTGGAGATTATTCTAGGAAAGGAGAAAGGTGCACCACTGTAGTGA--------AGGATGTAAGAACTATAGATCTAATTTC-CATATAGCCTTATAAAATTATCACATTT-GATAAGATTAATGAAATTAATA i mm10.chr8 I 1483 I 323 s canFam3.chr5 80424889 254 + 88915250 TGGCTTTGGACATGTGAGGGTTTGCCCTTGCGATTGACAGCC-AATCTGTGTTTATTATTAGCTT-CTATAATCAGTAAGAGTGCTTATCTTGAGATTATATTTATCTTTATGCATGCTAAATCCTTCC--CTCTCTCTCCTAGAGATTATTTCAGGAAAGGAGAAAGATTCATCAGTGTAGT-A--------AG--TACATGAATTACAGAAGTATGCTC-AATATAGCCAAAATAAATCACCATATTTAG---AGATTAATGACATAGCTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 892830 244 + 1009443 CAGTTTTGAATATGTGAAAGTTTGTCCTTGCAATTGACAGCC-AATTTGCA-TTAATATTTGCCTCCTGTAATCAGTAAGACTACTTATCCTGAGATTGTATTTATCTTTATGCATGCTAAATCCT--C--CTCTCTCT--TGGAGATTACTCCAGG---------AGATTCACCAATATAGA-A--------ACCACATATGAACTATAGAACTACACTA-AATATAGTCTAAATAAATTAC--TATTCAGAGAGGAAGAATAAAATAGCTA i dasNov3.JH569970 C 0 C 0 a score=47254.000000 s hg38.chr16_GL383557v1_alt 6664 4 + 89672 -TTAA s panTro5.chr16 21432641 4 - 81586097 -TTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499512 4 - 90481686 -TTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732441 4 + 3010529 -TTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840145 4 + 163208435 -TTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318547 4 - 74971481 -TTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029541 4 - 78541002 -TTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423886 4 + 26466322 -TTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751237 4 + 43916225 -TTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187849 4 + 75399963 -TTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737101 4 - 7209941 -TTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477854 4 + 3907144 -TTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490388 4 - 44557958 -TGAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301038 4 + 6628207 -TGAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277547 4 - 5917169 -TGAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241538 4 - 10531588 -TGAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54897572 4 + 72247402 -TTAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2910428 4 + 9850184 -TTAA i proCoq1.NW_012152729v1 C 0 I 577 s otoGar3.GL873566 13661142 4 + 13852661 -ATAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80425143 4 + 88915250 -TTAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893074 4 + 1009443 TTTA- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22432807 323 - 129401213 I a score=133751.000000 s hg38.chr16_GL383557v1_alt 6668 12 + 89672 CTCCAAGTGTAT s panTro5.chr16 21432645 12 - 81586097 CTCCAAGTGTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499516 12 - 90481686 CTCCAAGTGTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732445 12 + 3010529 CTCCAAGTGTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840149 12 + 163208435 TTCCAAGTTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318551 12 - 74971481 TTCCAAGTGTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029545 12 - 78541002 TTCCAAGTGTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423890 12 + 26466322 TTCCAAGTGTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751241 12 + 43916225 TTCCAAGTGTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187853 12 + 75399963 TTCCAAGTATAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737105 12 - 7209941 TTCCAAGTGTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477858 12 + 3907144 TCCCAAGGGTAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490392 12 - 44557958 TTTCAAATGTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301042 12 + 6628207 TTTCAGGTGTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277551 12 - 5917169 TTTCAGGTGTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241542 12 - 10531588 TTTCAAGCGTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54897576 12 + 72247402 TTTCAAGGGTAT i micMur3.chr20 C 0 I 605 s otoGar3.GL873566 13661146 5 + 13852661 CTGCA------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80425147 12 + 88915250 TTTAAAGTGTAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893078 12 + 1009443 TTTCAAGTATAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22432807 323 - 129401213 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I a score=683673.000000 s hg38.chr16_GL383557v1_alt 6680 74 + 89672 TGTGTTTACCACCTG-------------------------------------------------------CCACCA--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAatagata----acagaatttcagagct s panTro5.chr16 21432657 74 - 81586097 TGTGTTTACCACCTG-------------------------------------------------------CCACCA--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAACAGata----acagaatttcagagct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499528 74 - 90481686 TGTGTTTACCACCTG-------------------------------------------------------CCACCA--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAACAGata----acagaatttcagagct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732457 73 + 3010529 TGTGTTTACCACCTG-------------------------------------------------------CCA-CA--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------CACAatagata----acagaatttcagagct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840161 74 + 163208435 TGTGTTTACCACCTG-------------------------------------------------------CCCCCC--CAC----AAG-----------------------------CAAAGTATCCTGTGCACAAA---------GACAatagata----acagaatttcagagct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318563 72 - 74971481 --TGTTTACCACCTG-------------------------------------------------------CCCCCC--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAatagata----acagaatttcagagct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029557 72 - 78541002 --TGTTTACCACCTG-------------------------------------------------------CCCCCC--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAatagata----acagaatttcagagct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423902 72 + 26466322 --TGTTTACCACCTG-------------------------------------------------------CCCCCC--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAatagata----acagaatttcagagct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751253 72 + 43916225 --TGTTTACCACCTG-------------------------------------------------------CCCCCC--CAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAatagata----acagaatttcagagct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187865 74 + 75399963 --TGTTTACCACCTG-------------------------------------------------------CCCCCCCACAC----ACA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAatagata----acagaatttcagagct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737117 68 - 7209941 --TGTTTACCACCTG-------------------------------------------------------CCCCCC----------CA-----------------------------CAAAGTGTCCTGTGCACAAA---------GACAATAaata----acagaatttcagagct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477870 74 + 3907144 TGTGTTTACCACCTG-------------------------------------------------------CCCCCC--CAC----ACA-----------------------------CAAAGTATCCTGTGCACAAA---------GACAACAGata----acagaatttcagagct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490404 76 - 44557958 TGTGTTTACCACCCG-------------------------------------------------------CCCCCC--CACCA--ACA-----------------------------TACAGTATCCTGTGCACAAA---------GGAAatagata----acagaatgtcagagct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301054 76 + 6628207 TGTGTTTACCACCCG-------------------------------------------------------CCCTCC--CACCA--ACA-----------------------------CACAGTATTCTGTGCACAAA---------GAAAatagata----acagaatatcagagct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277563 82 - 5917169 TGTGTTTACCACCCG---------------------------------------------------CCCCCCCCCC--CACCAACACA-----------------------------CACAGTGTCCTGTGCACAAA---------GGAAatagata----acagaatgtcagagct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241554 77 - 10531588 TGTGTTTACCACCCG--------------------------------------------------------CCCCC--CACCAACACA-----------------------------CACAGTGTCCTGTGCAGAAA---------GGAAatagata----acagaatgtcagagct i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13661151 81 + 13852661 TGTGTTCACC-TCTC-------------------------------------------------------TCTTTA--CAC----ACA-----------------------------TAGAGTATCTAGTGGACAAA-ACGGACCTAAGAATACCtt----atggaattttagagct i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80425159 170 + 88915250 TATGTTTGGCCCCCTACACACACCCAGActctctctctttctctttctctctctctctctctctctctctctctca--cac----acacacacacacacacac-acacacacTCATCCAGAGTGTCCTGGGAACAAATACTAATCTAAAAATAGATGGCttacaaaattttagggct i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893090 89 + 1009443 --AGTTTGCCCTCTA-------------------------------------------------------CACACA--CAC----ACA------------CACAACACAAACACATCCAGAGTGTTCTGTTGACAAATACT-----GACCTTAGCTA----AC----TTACAGAACT i dasNov3.JH569970 C 0 I 485 e micMur3.chr20 54897588 605 + 72247402 I e mm10.chr8 22432807 323 - 129401213 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I a score=541211.000000 s hg38.chr16_GL383557v1_alt 6754 44 + 89672 acaggagacctcagtaataattcagtccaacatgttcattttTA s panTro5.chr16 21432731 44 - 81586097 acaggagacctcagtaataattcagtccaacatgttcattttTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499602 44 - 90481686 acaggagacctcagtaataattcagtccaacatgttcattttTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732530 44 + 3010529 acaggagacctcagtaataattcagtccaacatgttcattttTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840235 43 + 163208435 acaggagaccttagtaataattcagtccaaTA-GTTCATTTTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318635 44 - 74971481 acaggagaccttagtaataattcagtccaacatgttcattttTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029629 44 - 78541002 acaggagaccttagtaataattcagtccaacatgttcattttTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14423974 44 + 26466322 acaggagaccttagtaataattcagtccaacatgttcattttTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751325 44 + 43916225 acaggagaccttagtaataattcagtccaacatgttcattttTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187939 44 + 75399963 acaggagaccttagtaataattcagtccaacatgttcattttTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737185 44 - 7209941 acaggagaccttagtaataattcagtccaacatgttcattttTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477944 44 + 3907144 acaggagaccttagtaataattcagtccaacatgttcagtttta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490480 44 - 44557958 acaggaaaccttagtaataattcactccaacaagttcattttTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301130 44 + 6628207 acaggaaaccttagtaataattcagtccaacaagttcattttTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277645 44 - 5917169 acaggaaaccttagcaataactcagtccaacaagttcattttTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241631 44 - 10531588 acaggaaaccttagtaataattcagtccaacaagttcattttTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13661232 44 + 13852661 agaggagaccttagtgataattcagtccaacaggctcattttta i otoGar3.GL873566 C 0 I 1120 s canFam3.chr5 80425329 42 + 88915250 agaagacaccttagtgttaattcaatccaatctgttcatttt-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54897588 605 + 72247402 I e mm10.chr8 22432807 323 - 129401213 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I e dasNov3.JH569970 893179 485 + 1009443 I a score=520210.000000 s hg38.chr16_GL383557v1_alt 6798 61 + 89672 CCTAAAAAAAATTTTTTTTCAGGCAGCTCTCTCAACCAGGATAAGTTGAGAGACTCCTACA s panTro5.chr16 21432775 60 - 81586097 CCTAAAAAAA-TTTTTTTTCAGGCAGCTCTCTCAACCAGGATAAGTTGAGAGACTCCTACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499646 59 - 90481686 CCTAAAAAAA--TTTTTTTCAGGCAGCTCTCTCAACCAGGATAAGTTGAGAGACTCCTACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732574 61 + 3010529 CCTAAAAAAAATTTTTTTTCAGGCAGCTCTCTCAACCAGGATAAGTTGAGAGACTCCTACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840278 56 + 163208435 CCTAAAAAAAAATTTTTTTCATACAGCTCTCTCAACAAGGATA-----AGAGACTCCTACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318679 61 - 74971481 CCTTAAAAAATTTTTTTTtcaggcagctctctgaaccaggataagttgagagactccTACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029673 61 - 78541002 CCTTAAAAAATTTTTTTTTCAGGCAGCTCTCTGAACCAGGATAAGTTGAGAGACTCCTACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424018 61 + 26466322 CCTTAAAAAAATTTTTTTtcaggcagctctctgaaccaggataagttgagagactccTACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751369 61 + 43916225 CCTTAAAAAAATTTTTTTtcaggcagctctctgaaccaggataagttgagagactccTACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58187983 61 + 75399963 CCTTAAAAAAATTTTTTTTCAGGCAGCTCTCTGAACCAGGATAAGTTGAGAGACTCCTACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737229 61 - 7209941 CCTTAAAAAAAATTTTTTtcaggcagctctctgaaccaggataagttgagagactccTACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 477988 61 + 3907144 cCTTAAAAAAATTTTTTTtcaggcagctctctgaaccaggataagttgagagactccTACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490524 54 - 44557958 CTT-----AAATTTTTTTTCAGGCAGCTCTCTGAACCAGGATAAGTT--GAGACTCCTACA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301174 50 + 6628207 CT---------TTTTTTTTTAGGCAGCTCTCTGAACCAGGATAAGTT--GAGACTCCTACA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277689 54 - 5917169 CTT-----AAATTTTTTTTCAGGCAGCTCTCTGAACCAGGATAAGTT--GAGACTCCTACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241675 54 - 10531588 CTT-----AAATTTTTTTTCAGGCAGCTCTCTGAACCAGGATAAGTT--GAGACTCCTACA i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80425371 0 + 88915250 C e micMur3.chr20 54897588 605 + 72247402 I e mm10.chr8 22432807 323 - 129401213 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I e dasNov3.JH569970 893179 485 + 1009443 I e otoGar3.GL873566 13661276 1120 + 13852661 I a score=105632.000000 s hg38.chr16_GL383557v1_alt 6859 9 + 89672 ACATGCTTA s panTro5.chr16 21432835 9 - 81586097 ACATGCTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499705 9 - 90481686 ACATGCTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732635 9 + 3010529 ACATGCTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840334 9 + 163208435 ACATGCTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318740 9 - 74971481 ACATGCTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029734 9 - 78541002 ACATGCTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424079 9 + 26466322 ACATGCTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751430 9 + 43916225 ACATGCTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188044 9 + 75399963 ACATGCTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737290 9 - 7209941 ACATGCTTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478049 9 + 3907144 ACATGCTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490578 9 - 44557958 ACATGCTTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301224 9 + 6628207 ACATGCTTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3277743 9 - 5917169 ACATGCTTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9241729 9 - 10531588 ACATGCTTA i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22433130 9 - 129401213 acacacaca i mm10.chr8 I 323 C 0 e canFam3.chr5 80425371 0 + 88915250 C e micMur3.chr20 54897588 605 + 72247402 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I e dasNov3.JH569970 893179 485 + 1009443 I e otoGar3.GL873566 13661276 1120 + 13852661 I a score=1558436.000000 s hg38.chr16_GL383557v1_alt 6868 140 + 89672 TTTATAAAGATATTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagccag--cctacggcaaagcca-tggctaaaaacccttgtcatctgctccTGAAT----TTATCTCCAATCTT s panTro5.chr16 21432844 140 - 81586097 TTTATAAAGATATTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaattagaaaacttcttctaagtcacagccag--cctacggcaaagcca-tggctaaaaacccttgtcatctgctcctgaat----ttatctccaatctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499714 140 - 90481686 TTTATAAAGATATTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaattagaaaacttcttctaagtcacagccag--cctacggcaaagcca-tggctaaaaacccttgtcatctgctcctgaat----ttatctccaatctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732644 139 + 3010529 TTTATAAAGATATTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagccag--cctacggcaaagcca-tggctaaaaaccctggtcatctgctccTGAAT----TTATCTCC-ATCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840343 140 + 163208435 TTTATAAAGATGTTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacattcag--tctatggcaaagcca-tggctaaaaactcttgtcatctgctccTGAAT----TTATCTCCAATCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318749 140 - 74971481 TTTATAAAGATGTTTAAATTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagtcag--tctacggcaaagcca-tggctaaaaacccttgtcatctgctccTGAAT----TTATCTCCAACCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029743 140 - 78541002 TTTATAAAGATGTTTAAACTGAAA-CCTAAGAAATCTGAGGC-CTAAAG-AAATCAGAAAACTTCTTCTAAGTCACAGTCAG--TCTACGGCAAAGCCA-TGGCTAAAAACCCTTGTCATCTGCTCCTGAAT----TTATCTCCAACCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424088 140 + 26466322 TTCATAAAGATGTTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagtcag--tctacggcaaagcca-tggctaaaaacccttgtcatctgctccTGAAT----TTATCTCCAACCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751439 140 + 43916225 TTTATAAAGATGTTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagtcag--tctacggcaaagcca-tggctaaaaacccttgtcatctgctccTGAAT----TTATCTCCAACCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188053 140 + 75399963 TTTATAAAGATGTTTAAACTGAAA-CCTAAGAAATCTGAGGC-CTAAAG-AAATCAGAAAACTTCTTCTAAGTCACAGTCAG--TCTACGGCAAAGCCA-TGGCTAAAAACCCTTGTCATCTGCTCCTGAAT----TTATCTCCAATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737299 140 - 7209941 TTTATAAAGATGTTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagtcag--tctacggcaaagcca-tggctaaaaacccttgtcatctgctcctgaat----ttatctccaaccTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478058 140 + 3907144 TTTATAAAGATGTTTAAACTGAAA-CCtaagaaatctgaggc-ctaaag-aaatcagaaaacttcttctaagtcacagtcag--tctacggcaaagcca-tggctaaaaacccttgtcatctgctcctgaat----ttatctccaatctt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490587 136 - 44557958 TTTATAAAGATGTTTAAACTGAAA-CCTATgaaaactgaggc-ctaaag-aaatcagaaaa---cttctaagtcatagtcag--tc-atggcaaagcca-tggctaaaaaccattgtcatctgctcctgaat----ttatctccaatCTT i calJac3.chr20 C 0 I 143 s saiBol1.JH378225 6301233 137 + 6628207 TTTATAAAGATGTTTAAACTGAAA-TCTATgaaaactgaggc-ctaaag-aaatcagaaaa---cttctaaatcatagtcag--tctatggcaaagcca-tggctaaaaaccactgtcatctgctccTGAGT----TTATCTCCAATCTT i saiBol1.JH378225 C 0 I 141 s cebCap1.NW_016107433v1 3277752 137 - 5917169 TTTATAAAGATGTTTAAACTGAAA-CCTATgaaaactgaggc-ctaaag-aaatcagaaaa---cttctaagtcatagtcag--tttatggcaaagcca-tgggtaaaaaccactgtcatctgctcctgaat----ttatctcCAATCTT i cebCap1.NW_016107433v1 C 0 I 142 s aotNan1.NW_018500622v1 9241738 140 - 10531588 TTTATAAAGATGTTTAAACTGAAA-CCTATgaaaactgaggc-ctaaag-aaatcataaaacttcttctaattcatagtcag--tctatggcaaagcga-tggctaaaaaccattgtcatctgctccTGAAT----TTATCTCCAATCTT i aotNan1.NW_018500622v1 C 0 I 133 s mm10.chr8 22433139 138 - 129401213 cacacacacacacacacacacaca-TCTAAGAAAACTGAAAC-CC--AG-GAACCCTTGTCCTTCTCTCCTGTCCCCTCCTGGACTGAACGCAGGGCCCTTTGCACACATAGCTCAGCCTCCAATCTTATTC----TTATTTCC---CTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80425371 133 + 88915250 ----taaagctatg-aaacagaaaccctaagaaaaatgagac-ttaaagaaaataagaaaacttcctccaagtc--agtcaa----tgaggcaaaacca-tggctaaaaatccatgtcctcttctccagagt----tcatcctcAACTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893664 138 + 1009443 tttatatagatgag-aagctgaaaccctacaaaaacagaggcacctcca-aaattagaaaa---ctttcaaatcacaatcag--t----ggcaaagtca-tggataaaaatccatgtGATCTTTTCCTAAGTAAACTGTCCATCAACTTT i dasNov3.JH569970 I 485 C 0 e micMur3.chr20 54897588 605 + 72247402 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I e otoGar3.GL873566 13661276 1120 + 13852661 I a score=15294.000000 s hg38.chr16_GL383557v1_alt 7008 3 + 89672 CCA s panTro5.chr16 21432984 3 - 81586097 cCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499854 3 - 90481686 cCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732783 3 + 3010529 CCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840483 3 + 163208435 CAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318889 3 - 74971481 CAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029883 3 - 78541002 CAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424228 3 + 26466322 CAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751579 3 + 43916225 CAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188193 3 + 75399963 CAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737439 3 - 7209941 CAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478198 3 + 3907144 cAA i colAng1.NW_012123265v1 C 0 C 0 s mm10.chr8 22433277 3 - 129401213 TTA i mm10.chr8 C 0 C 0 s canFam3.chr5 80425504 3 + 88915250 CAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893802 3 + 1009443 CAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54897588 605 + 72247402 I e proCoq1.NW_012152729v1 2910432 577 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13661276 1120 + 13852661 I a score=50850.000000 s hg38.chr16_GL383557v1_alt 7011 6 + 89672 TTTGTT s panTro5.chr16 21432987 6 - 81586097 TTTGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499857 6 - 90481686 TTTGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732786 6 + 3010529 TTTGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840486 6 + 163208435 TTTGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318892 6 - 74971481 TTTGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029886 6 - 78541002 TTTGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424231 6 + 26466322 TTTGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751582 6 + 43916225 TTTGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188196 6 + 75399963 TTTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737442 6 - 7209941 TTTGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478201 6 + 3907144 TTTGTT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54898193 6 + 72247402 TTTGGT i micMur3.chr20 I 605 C 0 s mm10.chr8 22433280 6 - 129401213 GTTGTT i mm10.chr8 C 0 I 5 s canFam3.chr5 80425507 6 + 88915250 TTTGGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893805 6 + 1009443 TTTGGT i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2910432 577 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13661276 1120 + 13852661 I a score=158515.000000 s hg38.chr16_GL383557v1_alt 7017 15 + 89672 TTTTTAAGATAGCAT s panTro5.chr16 21432993 15 - 81586097 TTTTTAAGATAGCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499863 15 - 90481686 TTTTTAAGATAGCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732792 15 + 3010529 TTTTTAAGATAGCAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840492 15 + 163208435 TTTTTAAGATAGCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318898 15 - 74971481 TTTTTAAGATAGCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029892 15 - 78541002 TTTTTAAGATAGCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424237 15 + 26466322 TTTTTAAGATAGCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751588 15 + 43916225 TTTTTAAGATAGCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188202 15 + 75399963 TTTTTAAGATAGCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737448 15 - 7209941 TTTTTAAAATAGCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478207 15 + 3907144 TTTTTAAGATAGCAT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54898199 15 + 72247402 TTTTTAAGATAGCAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2911009 15 + 9850184 TTTTTAAGACAGCAT i proCoq1.NW_012152729v1 I 577 C 0 s mm10.chr8 22433291 15 - 129401213 TCTTTAAGATAGCAA i mm10.chr8 I 5 C 0 s canFam3.chr5 80425513 14 + 88915250 -TTTTTAAATAGTGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 893811 15 + 1009443 TTTTTAAAAGAGTGC i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13661276 1120 + 13852661 I a score=80425.000000 s hg38.chr16_GL383557v1_alt 7032 9 + 89672 AAAATCATA s panTro5.chr16 21433008 9 - 81586097 AAAATCATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499878 9 - 90481686 AAAATCATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732807 9 + 3010529 AAAATCATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840507 9 + 163208435 AAAATCATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318913 9 - 74971481 AAAATCATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029907 9 - 78541002 AAAATCATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424252 9 + 26466322 AAAATCATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751603 9 + 43916225 AAAATCATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188217 9 + 75399963 AAAATCATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737463 9 - 7209941 AAAATCATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478222 9 + 3907144 AAAAGCATA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54898214 9 + 72247402 AAAATCATA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2911024 9 + 9850184 AAAATCATA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13662396 9 + 13852661 AAAAAAAAA i otoGar3.GL873566 I 1120 C 0 s mm10.chr8 22433306 5 - 129401213 ----GCAGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80425527 9 + 88915250 AAAATCATA i canFam3.chr5 C 0 I 5 s dasNov3.JH569970 893826 5 + 1009443 AAAAT---- i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=681845.000000 s hg38.chr16_GL383557v1_alt 7041 67 + 89672 AAGCACTATTTGTATAGATTACTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG s panTro5.chr16 21433017 67 - 81586097 AAGCACTATTTGTATAGATTACTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499887 67 - 90481686 AAGCACTATTTGTATAGATTACTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732816 67 + 3010529 AAGCACTATTTGTATAGATTACTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840516 67 + 163208435 AAGCACTATTTGTATAGATTACTCAGCAGCCAATACAAATGAGTCAGAACTC--AAGTTTGCCCACCAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318922 66 - 74971481 AAGCACTATTTGTGTATATTATTCAGCAG-CAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029916 66 - 78541002 AAGCACTATTTGTGTATATTATTCAGCAG-CAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424261 67 + 26466322 AAGCACTATTTGTGTATATTATTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751612 67 + 43916225 AAGCACTATTTGTGTATATTATTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188226 67 + 75399963 AAGCACTATTTGTGTATATTATTCAGCAGCCAATACAAATGAGTCAGAACTC--AAGCTTGCTCACTGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737472 67 - 7209941 AAGCACTATTTGTGTATATTATTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478231 67 + 3907144 AAGCACTATTTGTGTATATTATTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAGCTTGCTCACTGG i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54898223 67 + 72247402 AAACACTATTTGTATAGATTACTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAACTTGCTCACTGG i micMur3.chr20 C 0 I 241 s proCoq1.NW_012152729v1 2911033 67 + 9850184 AAACACTATTTGTATAGATTACTCAGCAGCCAGTACAAATGAGTCAGAACTC--AAACTTGCTCACTGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13662405 67 + 13852661 AAACACTACTTGTATAGATTACTCAGCAGCTGGTACAAATGAGTCAGAACTC--AAACTTGCTCACTGG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22433311 69 - 129401213 TACCACCATATGAGCAGATTATTTAGCAGCCAGTGCCAAAGAGTAAGGACTCAGAAATTCACTCCTAGG i mm10.chr8 C 0 C 0 s dasNov3.JH569970 893831 52 + 1009443 ---------------AGATTATTCACCACCCAGTACAAATGAGTTAGGAATC--AAACTTGCTCACTGA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=43725.000000 s hg38.chr16_GL383557v1_alt 7108 5 + 89672 GTCTT s panTro5.chr16 21433084 5 - 81586097 GTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499954 5 - 90481686 GTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732883 5 + 3010529 GCCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840583 5 + 163208435 GTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318988 5 - 74971481 ATCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029982 5 - 78541002 ATCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424328 5 + 26466322 ATCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751679 5 + 43916225 ATCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188293 5 + 75399963 GTCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737539 5 - 7209941 ATCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478298 5 + 3907144 GTCTT i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2911100 5 + 9850184 GTCtt i proCoq1.NW_012152729v1 C 0 I 179 s otoGar3.GL873566 13662472 5 + 13852661 GTCTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22433380 5 - 129401213 ATCTT i mm10.chr8 C 0 C 0 s dasNov3.JH569970 893883 5 + 1009443 GTCAT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898290 241 + 72247402 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=9555.000000 s hg38.chr16_GL383557v1_alt 7113 1 + 89672 T s panTro5.chr16 21433089 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499959 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732888 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840588 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318993 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029987 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424333 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751684 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188298 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737544 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478303 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662477 1 + 13852661 T i otoGar3.GL873566 C 0 I 253 s mm10.chr8 22433385 1 - 129401213 T i mm10.chr8 C 0 C 0 s dasNov3.JH569970 893888 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898290 241 + 72247402 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=9555.000000 s hg38.chr16_GL383557v1_alt 7114 1 + 89672 A s panTro5.chr16 21433090 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499960 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732889 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840589 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318994 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029988 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424334 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751685 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188299 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737545 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478304 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662731 1 + 13852661 A i otoGar3.GL873566 I 253 I 1 s mm10.chr8 22433386 1 - 129401213 A i mm10.chr8 C 0 C 0 s dasNov3.JH569970 893889 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898290 241 + 72247402 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=504980.000000 s hg38.chr16_GL383557v1_alt 7115 57 + 89672 TAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG s panTro5.chr16 21433091 57 - 81586097 TAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21499961 57 - 90481686 TAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732890 57 + 3010529 TAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840590 57 + 163208435 TAGTTAAAAACTGAAGCAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21318995 57 - 74971481 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21029989 57 - 78541002 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424335 57 + 26466322 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751686 57 + 43916225 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188300 57 + 75399963 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737546 57 - 7209941 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478305 57 + 3907144 CAGTTAAAAACTGAAGTAGTCAGCTTTTATCTAAGATTAACACAAA---AGTCTCACCAG i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54898531 56 + 72247402 TAGTTAACAACTGAAGTAGTCATGTTTTATCTAAGATTAACATGAT----ATCTCACCAG i micMur3.chr20 I 241 C 0 s otoGar3.GL873566 13662733 57 + 13852661 TAGTTAAAAACTGAAGTAGTCAGGTTTTATGTAAGATTAATATGAT---AATTTCACAAG i otoGar3.GL873566 I 1 T 310 s mm10.chr8 22433387 56 - 129401213 AAACTAAGACCTGAAAGACTCAG-TCTTGTCAAAGACTGGCACAAT---AGTTTCACTAG i mm10.chr8 C 0 C 0 s dasNov3.JH569970 893890 60 + 1009443 TAGTAAAAAACAGAAGTAGTCAGGTCTCATCTGAGATAACCATGATAGTAGTCTCACCAT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=193575.000000 s hg38.chr16_GL383557v1_alt 7172 25 + 89672 TTATGAGAGTAAGTGAGCATTTTAA s panTro5.chr16 21433148 25 - 81586097 TTATGAGAGTAAGTGAGCATTTTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500018 25 - 90481686 TTATGAGAGTAAGTGAGCATTTTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732947 25 + 3010529 TTATAAGAGTAAGTGAGCATTTTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840647 25 + 163208435 TTATGAGAGTAAGTGAGCATTTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319052 25 - 74971481 TTATGAGAGTAAGTGAGCATTTTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030046 25 - 78541002 TTATGAGAGTAAGTGAGCATTTTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424392 25 + 26466322 TTATGAGAGTAAGTGAGCATTTTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751743 25 + 43916225 TTATGATAGTAAGTGAGCATTTTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188357 25 + 75399963 TTATGAGAGTAAGTGAGCATTTTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737603 25 - 7209941 TTATGAGAGTAAGTGAGCATTTTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478362 25 + 3907144 TTATGAGACTAAGTGAGCATTTAAA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54898587 25 + 72247402 GTATGAAAGCAAGTAAGCATTTTAA i micMur3.chr20 C 0 I 739 s otoGar3.GL873566 13662480 15 + 13852661 gtgtgtgtgtgtgtg---------- i otoGar3.GL873566 T 310 C 0 s mm10.chr8 22433443 23 - 129401213 -TGTGAGAGCAGGTGAGTATTTCA- i mm10.chr8 C 0 C 0 s dasNov3.JH569970 893950 25 + 1009443 GGATGAGAGCAAGTGAGCtttttaa i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=82632.000000 s hg38.chr16_GL383557v1_alt 7197 19 + 89672 AA-tttttaattt------------------tattttt------ s panTro5.chr16 21433173 19 - 81586097 AA-tttttaattt------------------tattttt------ i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500043 19 - 90481686 AA-tttttaattt------------------tattttt------ i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732972 20 + 3010529 AAttttttaattt------------------tattttt------ i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840672 19 + 163208435 AA-tttttaattt------------------tattttt------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319077 19 - 74971481 AA-tttttaattt------------------tattttt------ i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030071 19 - 78541002 AA-tttttaattt------------------tattttt------ i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424417 19 + 26466322 AA-tttttaattt------------------tattttt------ i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751768 19 + 43916225 AA-tttttaattt------------------tattttt------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188382 19 + 75399963 AA-tttttaattt------------------tattttt------ i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737628 19 - 7209941 AA-tttttaattt------------------tattttt------ i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478387 19 + 3907144 CA-tttttaattt------------------tattttt------ i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662495 4 + 13852661 ----------------------------------tgtg------ i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22433466 16 - 129401213 ----TCTCACTCC------------------TGTTTTT------ i mm10.chr8 C 0 I 1482 s dasNov3.JH569970 893975 41 + 1009443 ---ttttttttctcctcccctcccttcctgctatttttgctttc i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=8281.000000 s hg38.chr16_GL383557v1_alt 7216 1 + 89672 t s panTro5.chr16 21433192 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500062 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732992 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840691 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319096 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030090 1 - 78541002 t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424436 1 + 26466322 t i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751787 1 + 43916225 t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188401 1 + 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737647 1 - 7209941 t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478406 1 + 3907144 t i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662499 1 + 13852661 t i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 894016 1 + 1009443 t i dasNov3.JH569970 C 0 I 347 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22433482 1482 - 129401213 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=1166967.000000 s hg38.chr16_GL383557v1_alt 7217 208 + 89672 tgagacagggtcttgctctattatccaggctggagtgcagtggc-tcaatcac-agtcactacagcctcaatgtcctgggttcaagcaatccttccacctcagcctcccaagtacctgggattacaggtgcatgccacaatgttcggctaatttttgtattttttgt-a-g----------agacagggtt---------------------------tcaccatgttgcccaggctg-gtcacgaactc s panTro5.chr16 21433193 208 - 81586097 tgagacagggtcttgctctattatccaggctggagtgcagtggc-tcaatcac-agtcactacagcctcaatgtcctgggttcaagcaatccttccacctcagcctcccaagtacctgggattacaggtgcatgccaccatgtttggctaatttttctattttttgt-a-g----------agacagggtt---------------------------tcaccatgttgcccaggctg-gtcacgaactc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500063 208 - 90481686 tgagacagggtcttgctctattatccaggctggagtgcagtggc-tcaatcac-agtcactacagcctcaatgtcctgggttcaagcaatccttccacctcagcctcccaagtacctgggattacaggtgcatgccaccatgttcggctaatttttctattttttgt-a-g----------agacagggtt---------------------------tcaccatgttgcccaggctg-gtcacgaactc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 732993 207 + 3010529 tgagacagggtcttgctctattatccaggctggagtgcagtggc-tcaatcac-agtcactacagcctcaatgtcct-ggttcaagcaatccttccacctcagcctcccaagtacctgggattacaggtgcatgccaccatgttcggctaatttttgtattttttgt-a-g----------agacagggtt---------------------------tcaccatgttgcccaggctg-gtcacgaactc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840692 219 + 163208435 tgagacagggtcttgctctattatccaggctggagtgcagtggc-tcaatcatgactcactatagcctcaatgtcctgggttcaagcaatcctcccacctcagcctcccgagtacctgggattacaggttcatgccaccatgtttggctaatttttgtattttttgt-a-tttttttgtacagacagggtt---------------------------tcactatgttgcccaggctg-gtctcgaactc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319097 218 - 74971481 tgagacagggtcttgatctatcacccaggctggagtgcagtggc-tcagtcgtggctcactgcagcctccatgtcctgggttcaagcaattctcccacctcagcctcccaagtacctgggattacaagtacataccaccatgttcagctaatttttgtattttttgt-a-t-tttttttagagacagggtt---------------------------tcaccatgttgcccacgctg-gtctcaaattc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030091 218 - 78541002 tgagacagggtcttgatctatcacccaggctggagtgcagtggc-tcagtcgtggctcactgcagcctccatgtcctgggttcaagcaattctcccacctcagcctcccaagtacctgggattacaagtacataccaccatgttcagctaatttttgtattttttgt-a-t-tttttttagagacagggtt---------------------------tcaccatgttgcccacgctg-gtctcaaattc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424437 218 + 26466322 tgagacagggtcttgatctatcacccaggctggagtgcagtggc-tcagtcgtggctcactgcagcctccatgtcctgggttcaagcaattctcccacctcagcctcccaagtacctgggattacaagtacataccaccatgttcagctaatttttgtattttttgt-a-t-tttttttagagacagggtt---------------------------tcaccatgttgcccacgctg-gtctcaaattc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20751788 219 + 43916225 tgagacagggtcttgatctatcacccaggctggagtgcagtgcc-tcagtcgtggctcactgcagcctccatgtcctgggttcaaagaattctcccacctcagcctcccaagtacctgggattacaagtacataccaccatgttcagctaatttttgtattttttgtgg-t-tttttttagagacagggtt---------------------------tcaccatgttgcccaggctg-gtctcaaattg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188402 218 + 75399963 tgagacagggtcttgatctatcacccaggctggagtgcagtggc-tcaatcgtggctcactgcagcctccatgtcctgggttcaagcaatcctcccacctcagcctcccaagtacctgggattacaagtacataccaccatgttcggctaatttttgtattttttgt-a-t-tttttttagagacagggtt---------------------------tcaccatgttgcccaggctg-gtctcaaattc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737648 219 - 7209941 tgagacagggtcttgatctatcacccaggctggagtgcagtggc-tcagtcgtggctcactgcagcctccatgtcctgggttcaagcaattctcccacctgagcctcccaagtacctgggattacaagtacataccaccatgttcagctaatttttgtattttttgt-gtt-tttttttagagacagggtt---------------------------tcaccatgttgcccaggctg-gtctcaaattc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478407 218 + 3907144 tgagacagggtcttgatctatcacccaggctggagtgcagtggc-tcagtcgtggctcactgcagccttcatgtcctgggttcaagcaatcctcccacctcagcctcccaagtacctgggattacaaatgcataccgccatgttcggctaatttttgtattttttgt-a-t-tttttttagagacagggtt---------------------------tcaccatgttgcccaggctg-gtctcgaattc i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662500 209 + 13852661 ggagacagagtctcactttatcgccctcagtagagtgccatggcatca--cacagctcacagcaacctccaactcctgggcttaggcaattctc----------------------------tacagccgtctgccacaatgcccagttatttt-----tttgttgc-a-g-tttggctg-gggctgggttggaacccaccacccttggtatatggggtcagcgtcctaccca--ctgagccacagacac i otoGar3.GL873566 C 0 I 85 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22433482 1482 - 129401213 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e dasNov3.JH569970 894017 347 + 1009443 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=220341.000000 s hg38.chr16_GL383557v1_alt 7425 36 + 89672 ctgggctcaagtaatctgcccacctcggcctcccCA s panTro5.chr16 21433401 36 - 81586097 ctgggctcaagtaatctgcccacctcggcctcccCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500271 36 - 90481686 ctgggctcaagtaatctgcccacctcggcctcccCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733200 36 + 3010529 ctgggctcaagtaatctgcccacctcggcctcccCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840911 36 + 163208435 ctaggctcaagcaatctgcccaccttggcctcccCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319315 36 - 74971481 ctgggctcaagcaatctgcccaccttggcctcccCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030309 36 - 78541002 ctgggctcaagcaatctgcccaccttggcctcccCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424655 36 + 26466322 ctgggctcaagcaatctgcccaccttggcctcccCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752007 36 + 43916225 ctgggctcaagcaatctgcccaccttggcctcccCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188620 36 + 75399963 ctgggctcaagcaatctgcccaccttggcctcccCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737867 36 - 7209941 ctgggctcaagcaatctgcccaccttggcctcccCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478625 36 + 3907144 ctgggctcaagcaatctgcccaccttggcctcccCA i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22433482 1482 - 129401213 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e dasNov3.JH569970 894017 347 + 1009443 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13662709 85 + 13852661 I a score=64893.000000 s hg38.chr16_GL383557v1_alt 7461 10 + 89672 GTGAGTGAGC s panTro5.chr16 21433437 10 - 81586097 GTGAGTGAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500307 10 - 90481686 GTGAGTGAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733236 10 + 3010529 GTGAGTGAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840947 10 + 163208435 GTGAGTGAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319351 10 - 74971481 GTGAGTGAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030345 10 - 78541002 GTGAGTGAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424691 10 + 26466322 GTGAGTGAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752043 10 + 43916225 GTGAGTGAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188656 10 + 75399963 GTGAGTGAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737903 10 - 7209941 GTGAGTGAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478661 10 + 3907144 GTGAGTGAAC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662794 10 + 13852661 GCAAGTAAGC i otoGar3.GL873566 I 85 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22433482 1482 - 129401213 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e dasNov3.JH569970 894017 347 + 1009443 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=449052.000000 s hg38.chr16_GL383557v1_alt 7471 70 + 89672 ATTTTAATTCATGTTTTAAAAA--------TGGGAAAAAAGGAAAAAGAAAGGCCAAACATATGCC--------TTGGCTAATAAT s panTro5.chr16 21433447 70 - 81586097 ATTTTAATTCATGTTTTAAAAA--------TGGGAAACAAGGAAAAAGAAAGGCCAAACATATGCC--------TTGGCTAATAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500317 70 - 90481686 ATTTTAATTCATGTTTTAAAAA--------TGGGAAACAAGGAAAAAGAAAGGCCAAACATATGCC--------TTGGCTAATAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733246 68 + 3010529 ATTTTAATTCACG-TTTAAAAA--------TGGGAAAAAAGGAAAAAGAAAGGCCAAACATA-GCC--------TTGGCTAATAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53840957 71 + 163208435 ATTTTAATTCATGTTTTAAAAA-------CCGGAAAAAAAGGAATAAGAAGGGCCAAGCATAGGCC--------TTGGCTAATAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319361 70 - 74971481 ATTTTAATTCATGTTTTAAAAA--------CGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAATAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030355 70 - 78541002 ATTTTAATTCATGTTTTAAAAA--------CGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAATAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424701 70 + 26466322 ATTTTAATTCATGTTTTAAAAA--------CGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAATAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752053 70 + 43916225 ATTTTAATTCATGTTTTAAAAA--------CGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAATAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188666 70 + 75399963 ATTTTAATTCATGTTTTAAAAA--------CGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAATAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737913 70 - 7209941 ATTTTAATTCATGTTTTAAAAA--------CGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAATAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478671 70 + 3907144 ATTTTAATTCATGTTTTAAAAA--------TGGGAAAAAAGGAAAAAGAAGGGCCACACATAGGCC--------TTGGCTAACAAT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662804 86 + 13852661 ATTTTAATTCACTTTTTTAAAAAATTCACATTTGAAGAATGAGGAAAGAAGAAACAGTTGTTGGCTTACAGTTGTTGGCTAATGAT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 894364 65 + 1009443 ATTTTAATCCATGTTTTAAAAA--------TGAGAAA-----GAAAAAAATGGCCAAATATGGGTT--------CTGGCTAATGAT i dasNov3.JH569970 I 347 C 0 e canFam3.chr5 80425536 5 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22433482 1482 - 129401213 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=32839.000000 s hg38.chr16_GL383557v1_alt 7541 4 + 89672 CTAA s panTro5.chr16 21433517 4 - 81586097 CTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500387 4 - 90481686 CTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733314 4 + 3010529 CTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841028 4 + 163208435 CTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319431 4 - 74971481 CTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030425 4 - 78541002 CTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424771 4 + 26466322 CTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752123 4 + 43916225 CTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188736 4 + 75399963 CTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737983 4 - 7209941 CTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478741 4 + 3907144 CTAA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662890 4 + 13852661 CTAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80425541 4 + 88915250 CTGG i canFam3.chr5 I 5 C 0 s dasNov3.JH569970 894429 4 + 1009443 CTGG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22433482 1482 - 129401213 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=143365.000000 s hg38.chr16_GL383557v1_alt 7545 15 + 89672 CAGAAGGCTACATTT s panTro5.chr16 21433521 15 - 81586097 CAGAAGGCTACATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500391 15 - 90481686 CAGAAGGCTACATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733318 15 + 3010529 CAGAAGGCCACATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841032 15 + 163208435 CAGAAGGCTACATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319435 15 - 74971481 CAGAAGGCTACATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030429 15 - 78541002 CAGAAGGCTACATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424775 15 + 26466322 CAGAAGGCTACATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752127 15 + 43916225 CAGAAGGCTACATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188740 15 + 75399963 CAGAAGGCTACATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6737987 15 - 7209941 CAGAAGGCTACATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478745 15 + 3907144 CAGAAGGCTACATTT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13662894 15 + 13852661 CAGAAGGCTTCATTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22434964 15 - 129401213 CAAAAGACTAACTCT i mm10.chr8 I 1482 I 6 s canFam3.chr5 80425545 15 + 88915250 CAGAAGGGTGTATTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 894433 15 + 1009443 CAGAAGGCTACTTTT i dasNov3.JH569970 C 0 I 5 e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911105 179 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=39149.000000 s hg38.chr16_GL383557v1_alt 7560 4 + 89672 TATT s panTro5.chr16 21433536 4 - 81586097 TATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500406 4 - 90481686 TATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733333 4 + 3010529 TATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841047 4 + 163208435 TATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319450 4 - 74971481 TATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030444 4 - 78541002 TATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424790 4 + 26466322 TATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752142 4 + 43916225 TATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188755 4 + 75399963 TATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738002 4 - 7209941 TATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478760 4 + 3907144 TATT i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2911284 4 + 9850184 TATT i proCoq1.NW_012152729v1 I 179 C 0 s otoGar3.GL873566 13662909 4 + 13852661 CCTT i otoGar3.GL873566 C 0 I 1454 s mm10.chr8 22434985 4 - 129401213 CATT i mm10.chr8 I 6 C 0 s canFam3.chr5 80425560 4 + 88915250 TATT i canFam3.chr5 C 0 I 3 s dasNov3.JH569970 894453 4 + 1009443 TAAT i dasNov3.JH569970 I 5 C 0 e micMur3.chr20 54898612 739 + 72247402 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I a score=351880.000000 s hg38.chr16_GL383557v1_alt 7564 44 + 89672 ACTTTACCGTTAACGTACTGTAAAGATTCAGGCCACAGTCTTTT s panTro5.chr16 21433540 44 - 81586097 ACTTTACCATTAACGTACTGTAAAGATTCAGGCCACAGTCTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500410 44 - 90481686 ACTTTACCATTAACGTACTGTAAAGATTCAGACCACAGTCTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733337 44 + 3010529 ACTTTACCGTTAACGTACTGTAAAGATTCAGGCCACAGTCCTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841051 44 + 163208435 ACTTTACAATTAACATACTGTAAAAATTCAGGCCACAGTCCTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319454 44 - 74971481 ACATTACTGTTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030448 44 - 78541002 ACGTTACTGTTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424794 44 + 26466322 ACGTTACTGTTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752146 44 + 43916225 ACGTTACTATTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188759 44 + 75399963 ACTTTACTATTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738006 44 - 7209941 ACGTTACTATTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478764 44 + 3907144 ACTTTACCATTAACATATTGTAAAAATTCAGGCCACAGTCCTTT i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2911288 44 + 9850184 ACTTTACCATTAACATATTGTAAAAACTCAGGCCAGAGTCCTTT i proCoq1.NW_012152729v1 C 0 I 134 s mm10.chr8 22434989 37 - 129401213 ACTTCACT------ATATCAGAAACCCCTTGGCC-CAGCTTTTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80425567 44 + 88915250 ACTTTACCATTAACATATTTTTAAAACTCAGGCCACAGTCCTTT i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 894457 39 + 1009443 ACTTTACTGTTAACATTTTGTAAAAACTCAGACCAGAGT----- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=1487130.000000 s hg38.chr16_GL383557v1_alt 7608 232 + 89672 CACTCAGAAATAACTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAAAA------ATGATCAGGGATCAATATTTAAGTCAGTAGGCTTCCCACTCCAGAAGCAAATGGTCGTTTTTGAGCCATTGGAAGTACTA---AGGAGCCTGGACAGTCATAGCCACACTCTCCTTCCCACTCATGGGCTTTGCAGCAATGACAGGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAACCC s panTro5.chr16 21433584 232 - 81586097 CACTCAGAAATAACTCACTTTTTCTATGTCAGATATCCAGAC-TT---AAAAAAAAAA------ATGATCAGGGATCAATATTTAAGTCAGTAGGCTTCCCACTCCAGAAGCAAATGGTCGTTTTTGAGCCATTGGAAGTACTA---AGGAGCCTGGACAGTCATAGCCACACTCTCCTTCCCACTCACGGGCTTTGCAGCAATGACAGGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAATCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500454 231 - 90481686 CACTCAGAAATAACTCACTTTTTCTATGTCAGATATCCAGAC-TT---AAAAAAAAAA------ATGATCAGGGATCAATATTTAAGTCAGTAGGCTTCCCACTCCAGAAGCAAATGGTCGTTTTTGAGCCATTGGAAGTACTA---AGGAGCCTGGACAGTCATAGCCACACTCTCCTTCCCACTCACGGGCTTTGCAGCAATGAC-GGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAATCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733381 233 + 3010529 CACTCAGAAATAACTCACTTTTTCTATGTCAGATATCCAGACTTT---AAAAAAAAAA------ATGATCAGGGATCAATATTTAAGTCAGTAGGCTTCCCACTCCAGAAGCAAATGGTTGTTTTTGAGCCATTGGAAGTACTA---AGGAGCCTGGACAGTCATAGCCACACTCTCCTTCCCACTCATGGGCTTTGCAGCAATGACAGGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAACCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841095 235 + 163208435 CACTCAGAAGTAACTCATTTTTTCTATGTCAGATAGCCAGAC-TTTAAAAAAAAAAAA------AAAATCAGAGATCAAGATTTAAGTCAGTAGGCTTCCCACTCTGGAAGCAAATGGTGGTTTTTGAGCCATTGGAAGCACCA---AGAAGCCTGGACAGTCACAGCCACACTCTCCTTCCCACTCATGGGCTTTGCAGCAATGACGGGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAACCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319498 231 - 74971481 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATCAGAGATCAATATTTAAGTCAGTAGGCTTCCTACTCTGAAAGTAAACGGTGGTTTTTGAGCCATTGGAAGTACCA---AGGAGCCTGGACAGTCAGAGACACGCTCTCCTTCCCACTCGT-AGCTTTGCAGCAATGATAGGGGAAGAGCATGGTTACAAAAGTGGCACAGCAGCCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030492 231 - 78541002 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATCAGAGATCAATATTTAAGTCAGTAGGCTTCCTACTCTGAAAGTAAACGGTGGTTTTTGAGCCATTGGAAGTACCA---AGGAGCCTGGACAGTCAGAGACACACTCTCCTTCCCACTCGT-AGCTTTGCAGCAATGATAGGGGAAGAGCATGGTTACAAAAGTGGCACAGCAGCCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14424838 231 + 26466322 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATCAGAGATCAATATTTAAGTCAGTAGGCTTCCTACTCTGAAAGCAAACGGTGGTTTTTGAGCCATTGGAAGTACCA---AGGAGCCTGGACAGTCAGAGACACACTCTCCTTCCCACTCGT-AGCTTTGCAGCAATGATAGGGGAAGAGCATGGTTACAAAAGTGGCACAGCAGCCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752190 231 + 43916225 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATCAGAGATCAATATTTAAGTCAGTAGGCTTCCTACTCTGAAAGCAAACGGTGGTTTTTGAGCCATTGGAAGTACCA---AGGAGCCTGGACAGTCAGAGACACACTCTCCTTCCCACTCGT-AGCTTTGCAGCAATGATAGGGGAATAGCATGGTTACAAAAGTGGCACAGCAGCCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58188803 231 + 75399963 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATCAGAGATCAATATTTAAGTCAGTAGGCTTCCTACTCTGGAAGCAAACGGTGGTTTTTGAGCCATTGGAAGTACCA---AGGAGCCTGGACAGTCAGAGACACACTCTCCTTCCCACTCGT-GGCTTTGCAGCAATGATAGGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAGTCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738050 231 - 7209941 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATCAGAGATCAATATTTAAGTCAGTAGGCTTCCTACTCTGAAAGCAAACGGTGGTTTTTGAGCCATTGGAAGTACCA---AGGAGCCTGGACAGTCAGAGACACACTCTCCTTCCCACTCGT-AGCTTTGCAGCAATGATAGGGGAAGAGCATGGTTACAAAAGTGGCACAGCAGCCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 478808 232 + 3907144 CACTCAGAAGTAATTCACTTTTTCTATGTCAGATATCCAGAC-TT---TAAAAAAATA------ATAATGAGAGATCAATATTTAAGTCAGTAGGCTTTCCACTCTGGAAGCAAACGGTGGTTTTTGAGCCATTGGAAGTATCA---AGGAGCCTGGACACTCAGAGACACACTCTCCTTCCCACTCATGGGCTTTGCAGCAATGACAGGGGAAGAGCATGGTTAGAAAAGTGGCACAGCAGCCC i colAng1.NW_012123265v1 C 0 C 0 s mm10.chr8 22435026 193 - 129401213 TATCCCATGGCAATTCATCTTTTGAATAT--------CAGAC-TT-------------------ACAATCAG-GCTCAGTATTT-----ATCAGGCTGTCCACTACAGAAGCAGCAAATGGCTTCTGAGTCACCAAAAGCAGCACAGAGGAGCCAGG--AGTCACTGGTACCCTTTCTTTATCAAA----GACATCATGTCAATAGCTCAGGGAAAG---------AAAAGCGGC---TGAACCC i mm10.chr8 C 0 C 0 s canFam3.chr5 80425611 222 + 88915250 CACCTTGTTGTGACTCACCTTTTCTACATCAGACAT-AAGAC-TT---AAAAAAAAT-------------AGAGACTGATATTTAACTTATTAACATACCTATTCTGAAAACAAATGGTGCTTTCTCAGCCATCAGAAGCACAG---ACGGGCTAGAAGAGTCAGAGCCACTGTCTCCTTCCTTGTCATGGCCATGGCAGCAATGGCATAGGGAGGG--TAGTTAGAATAGTGCCGCAGTGGCCC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 894496 214 + 1009443 ------------------TCTTTCTATAACAGATAA-AAGAT-TA---AAAAAAAACAAAACATATAATCAGGGATCAATACTTAATTCACTAGGCTGCGCACTTTGGAAACAAATGATGG-TTCTGAGCCATAAGAAGCA--G---AGGAGCC-AAACAGTTACAGCCACTGTCTCTTTCCTATTTTA-GTCACTGCTGCAATGGTGAGGGGAGAGGGTAGATGGAAGAGTGATACAGGAGTTC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e saiBol1.JH378225 6301370 141 + 6628207 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=8323.000000 s hg38.chr16_GL383557v1_alt 7840 1 + 89672 C s panTro5.chr16 21433816 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500685 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733614 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841330 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319729 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030723 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425069 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752421 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189034 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738281 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479040 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6301511 1 + 6628207 c i saiBol1.JH378225 I 141 C 0 s mm10.chr8 22435219 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr5 80425833 1 + 88915250 T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 894710 1 + 1009443 C i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e aotNan1.NW_018500622v1 9241878 133 - 10531588 I e cebCap1.NW_016107433v1 3277889 142 - 5917169 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=13923.000000 s hg38.chr16_GL383557v1_alt 7841 1 + 89672 A s panTro5.chr16 21433817 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500686 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733615 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841331 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319730 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030724 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425070 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752422 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189035 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738282 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479041 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6301512 1 + 6628207 a i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278031 1 - 5917169 a i cebCap1.NW_016107433v1 I 142 C 0 s aotNan1.NW_018500622v1 9242011 1 - 10531588 a i aotNan1.NW_018500622v1 I 133 C 0 s mm10.chr8 22435220 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr5 80425834 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 894711 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e calJac3.chr20 21490723 143 - 44557958 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=508226.000000 s hg38.chr16_GL383557v1_alt 7842 46 + 89672 GCCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT s panTro5.chr16 21433818 46 - 81586097 GCCAAGCTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500687 46 - 90481686 GCCAAGCTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733616 46 + 3010529 GCCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841332 46 + 163208435 GCCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATAATATTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319731 46 - 74971481 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21030725 46 - 78541002 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425071 46 + 26466322 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752423 46 + 43916225 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189036 46 + 75399963 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738283 46 - 7209941 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479042 46 + 3907144 GTCAAACTAAAAGTAGATAAATGGCACCAGAGAAGAATACTATTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490866 46 - 44557958 gccAAACTAAAACTAGATAAATGGCACCAGAGTGGAACACTAGTTT i calJac3.chr20 I 143 C 0 s saiBol1.JH378225 6301513 44 + 6628207 gccAAACTAAAACTAGTT--TTAGTTCCAGGGTGGAATACTATTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278032 46 - 5917169 gccAAACTAAAACTAGATAAATGGCACCAGGGTGGAATACTATTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242012 46 - 10531588 gccAAACTAAAACTAGATAAATGGCACCAGAGTGGAATACTATTTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22435221 38 - 129401213 --CCAACTCAAGGCAGACATA------AACATGGGAGCACTATATT i mm10.chr8 C 0 C 0 s canFam3.chr5 80425835 46 + 88915250 GCCAAGCTAAAACTAAACAAAAAGCCTGAGATAAGAATACAATTTT i canFam3.chr5 C 0 I 166 s dasNov3.JH569970 894712 40 + 1009443 GTCAAG-TAAAACTGAATAAAAGG-----AATAAAAATACTATTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=47986.000000 s hg38.chr16_GL383557v1_alt 7888 7 + 89672 TCAAAAG s panTro5.chr16 21433864 7 - 81586097 TCAAAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500733 7 - 90481686 TCAAAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733662 7 + 3010529 TCAAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841378 7 + 163208435 TCAAAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21319777 7 - 74971481 TCAAAAG i rheMac8.chr20 C 0 I 267 s macFas5.chr20 21030771 7 - 78541002 TCAAAAG i macFas5.chr20 C 0 I 268 s macNem1.NW_012011355v1 14425117 7 + 26466322 TCAAAAG i macNem1.NW_012011355v1 C 0 I 268 s cerAty1.NW_011999143v1 20752469 7 + 43916225 TCAAAAG i cerAty1.NW_011999143v1 C 0 I 268 s chlSab2.chr5 58189082 7 + 75399963 TCAAAAG i chlSab2.chr5 C 0 I 268 s manLeu1.NW_012101698v1 6738329 7 - 7209941 TCAAAAG i manLeu1.NW_012101698v1 C 0 I 268 s colAng1.NW_012123265v1 479088 7 + 3907144 TAAAAAG i colAng1.NW_012123265v1 C 0 I 268 s calJac3.chr20 21490912 7 - 44557958 TCAAAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301557 7 + 6628207 TCAAAAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278078 7 - 5917169 TCAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242058 4 - 10531588 TCAA--- i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22435259 4 - 129401213 CAGA--- i mm10.chr8 C 0 C 0 s dasNov3.JH569970 894752 4 + 1009443 CTAA--- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425881 166 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=566306.000000 s hg38.chr16_GL383557v1_alt 7895 47 + 89672 AAGGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATATGTCCATCC s panTro5.chr16 21433871 47 - 81586097 AAGGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATACGTCCATCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500740 47 - 90481686 AAGGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATACGTCCATCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733669 48 + 3010529 AAGGTTATTACTTTTTTAGAAGAGATTGTGCT---TCCCATATGTCCATCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841385 47 + 163208435 AAGTTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATATGTCCATCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320051 47 - 74971481 aagGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATACGTCCATTC i rheMac8.chr20 I 267 C 0 s macFas5.chr20 21031046 47 - 78541002 aagGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATACGTCCATCC i macFas5.chr20 I 268 C 0 s macNem1.NW_012011355v1 14425392 47 + 26466322 aagGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATACGTCCATCC i macNem1.NW_012011355v1 I 268 C 0 s cerAty1.NW_011999143v1 20752744 47 + 43916225 aagGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATATGTCCATCC i cerAty1.NW_011999143v1 I 268 C 0 s chlSab2.chr5 58189357 47 + 75399963 aagGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATATGTCCATCC i chlSab2.chr5 I 268 C 0 s manLeu1.NW_012101698v1 6738604 47 - 7209941 aagGTTATTAC-TTTTTAGAAGAGATTGTGCT---TCCCATATGTCCATCC i manLeu1.NW_012101698v1 I 268 C 0 s colAng1.NW_012123265v1 479363 47 + 3907144 aagGTTATTAC-TTTTTAGAAGAGATTGTGTT---TCCCATATGTCCATCC i colAng1.NW_012123265v1 I 268 C 0 s calJac3.chr20 21490919 47 - 44557958 AAGGTTATTAC-TTTTTAGAAGAGACTGTACC---TCCCATAAGTCCATCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301564 47 + 6628207 AAGGTTATTAC-TTTTTAGAAGAGATTGTACC---TCCCATATGTCCATCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278085 47 - 5917169 AAGGTTATTAC-TTTTTAGAAGAGATTGTACC---TCCCATATGTCCATCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242062 47 - 10531588 AAGGTTATTAC-TTTTTAGAAGAGATTGTATC---TCTCATATGTCCATCC i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22435263 50 - 129401213 AAAGTTACCAC-TTTATGGAAGAGACTGTAATCTATCTTATGTGTCcatcc i mm10.chr8 C 0 I 291 s dasNov3.JH569970 894756 47 + 1009443 AAGGTTATTTT-TTGGGGGAAGAGATAGTAAT---TTCCACATGTCCATTC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425881 166 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=412478.000000 s hg38.chr16_GL383557v1_alt 7942 44 + 89672 CTTCAGAGCTTACA--------TCC---ATGTAAGTGGTTTAATTCCATTACTTC s panTro5.chr16 21433918 44 - 81586097 CTTCAGAGCTTACA--------TCC---ATGTAAGTGGTTTAATTCCATTACTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500787 44 - 90481686 CTTCAGAGCTTACA--------TCC---ATGTAAGTGGTTTAATTCCATTACTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733717 44 + 3010529 CTTCAGAGCTTACA--------TCC---ATGTAAGTGGTTTAATTCCATTACTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841432 44 + 163208435 CTTCAGAGCTTAAA--------TCC---ATGTACGTGGTTTAATTCCATTACTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320098 44 - 74971481 CTTCAGACCTTAAA--------TCC---ATGTAAGTGGTTTAATTCCATTACttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031093 44 - 78541002 CTTCAGACCTTAAA--------TCC---ATGTAAGTGGTTTAATTCCATTACTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425439 44 + 26466322 CTTCAGACCTTAAA--------TCC---ATGTAAGTGGTTTAATTCCAttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752791 44 + 43916225 CTTCAGACCTTAAA--------TCC---ATGTAAGTGGTTTAATTCCATTACttc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189404 44 + 75399963 CTTCAGACCTTAAA--------TCC---TTGTAAGTGGTTTAATTCCATTACttc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738651 44 - 7209941 CTTCAGACCTTAAA--------TCC---ATGTAAGTGGTTTAATTCCATTACttc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479410 44 + 3907144 CTTCAGACCTTAAA--------TCC---ATGTAAGTGGTTTAATTCCATTACttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21490966 47 - 44557958 CTTCAGAGTTTATA--------TCCATGATGCAAGTGGTTTAATTCCATTATTTC i calJac3.chr20 C 0 I 410 s saiBol1.JH378225 6301611 55 + 6628207 CTTCAGAGCTTATATCCATGATTCCATGATGCAAGTGGTTTAATTCCATTAtttc i saiBol1.JH378225 C 0 I 10 s cebCap1.NW_016107433v1 3278132 47 - 5917169 CTTCAGGGCTTATA--------TCCATGATGCAAGTGGTTTAATTCCGttatttc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242109 47 - 10531588 GTTCAGAGCTTATA--------TCCATGATGCAAGTGGTTTAATTCCATTATTTC i aotNan1.NW_018500622v1 C 0 I 14 s dasNov3.JH569970 894803 40 + 1009443 CTTTGGAACTTATA--------TCA---ATAcaaataccttaatttcctgg---- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425881 166 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=26150.000000 s hg38.chr16_GL383557v1_alt 7986 11 + 89672 --TAttttttt-----------------tt s panTro5.chr16 21433962 11 - 81586097 --TAttttttt-----------------tt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500831 11 - 90481686 --TAttttttt-----------------tt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733761 10 + 3010529 --TATTTTTTT-----------------G- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841476 11 + 163208435 --TAttttttt-----------------ct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320142 11 - 74971481 --ttttttttt-----------------tt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031137 11 - 78541002 --ttttttttt-----------------tt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425483 28 + 26466322 --tttttttttttttGACAGGGTCTCGCtt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752835 9 + 43916225 --ttttttttt------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189448 9 + 75399963 --ttttttttt------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738695 7 - 7209941 ----tttcttt------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479454 9 + 3907144 --ttttttttt------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491423 9 - 44557958 --ttttctttt------------------- i calJac3.chr20 I 410 I 4 s saiBol1.JH378225 6301676 9 + 6628207 --ttttctttt------------------- i saiBol1.JH378225 I 10 C 0 s cebCap1.NW_016107433v1 3278179 9 - 5917169 --ttttctttt------------------- i cebCap1.NW_016107433v1 C 0 I 59 s aotNan1.NW_018500622v1 9242170 9 - 10531588 --ctttctttt------------------- i aotNan1.NW_018500622v1 I 14 I 9 s dasNov3.JH569970 894843 11 + 1009443 tatttcagttt------------------- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425881 166 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=991120.000000 s hg38.chr16_GL383557v1_alt 7997 132 + 89672 g--------gggggggggcaggg--tctcactctgtcacccatggggctggagtacaatggtgcaatcacagctcaatgcagctgtgacttcccatgtataagcgatcttcccatctcagcctcctgagtagctgaaactat s panTro5.chr16 21433973 138 - 81586097 t--ttttttggcggggggcaggg--tctcactctgtcacccatggggctggagtacaatggtgcaatcacagctcaatgcagctgtgacttcccgtgtataagcgatcttcccatctcagcctcctgagtagctgaaactat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500842 136 - 90481686 t----ttttggcggggggcaggg--tctcactctgtcacccatggggctggagtacaatggtgcaatcacagctcaatgcagctgtgacttcccgtgtataagcgatcttcccatctcagcctcctgagtagctgaaactat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733771 131 + 3010529 ---------GGGGGggggcaggg--tctcactctgtcacccatggggctggagtacaatggtgcaatcacagctcaatgcagctgtgacttcccgtgtataagcgatcttcccatctcagcctcctgagtagctgaaactat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841487 140 + 163208435 ttttttttttttttgagacaggg--tcttgctctctctcccatggggctggagtacaatggtgcaatcacggctcaatgcagctgtgacttcccgtgcataagcgatcctcccatctcagcctcctgagtagctgaaactat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320153 139 - 74971481 t-ttttttttttttttgacaggg--tctcgctctgtcacccatggggctgtagaacaatggtgcaatcacggctcagtgcagctgtgacttcccgtgtgtaagcaatcctcccatctcagcctcctgagtagctgaaactat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031148 139 - 78541002 t-ttttttttttttttgacaggg--tctcgctctgtcacccatggggctgtagaacaatggtgcaatcacggctcagtgcagctgtgacttcccgtgtgtaagcaatcctcccatctcagcctcctgagtagctgaaactat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425511 139 + 26466322 t-ttttttttttttttgacaggg--tctcgctctgtcacccatggggctgtagaacaatggtgcaatcacggctcagtgcagctgtgacttcccgtgtgtaagcaatcctcccatctcagcctcctgagtagctgaaactac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752844 128 + 43916225 ------------ttttgacaggg--tctcgctctgtcacccatggggctgtagaacaatggtacaatcacggctcagtgcagctgtgacttcccgtgcgtaagcaatcctcccatctcagcctcctgagtagctgaaactat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189457 134 + 75399963 ------ttttttttttgacaggg--tctcgctctgtcacccatggggctgtagaacaatggtgcaatcacggctcagcgcagctgtgacttcccgtgcgtaagcaatcctcccatctcagcctcctgagtagctaaaactac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738702 134 - 7209941 ------ttttttttttgacaggg--tctcgctctgtcacccatggggctgtagaacaatggtgcaatcacggctcagtgcagctgtgacttccggtgcgtaagcaatcctcccatctcagcctcctgagtagctgaaactat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479463 131 + 3907144 ---------tttttgagacaggg--tctcgctctgtcacccatggggctgtagaacaatggtgcaatcatggctcagtgcagctgtgacttcccgtgcgtaagcgatcctcccatctcagcctcctgagtagctgaaactat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491436 132 - 44557958 --------tgtattgagataggg--tctcactctgtttcctatggggctgaagtgcaatggtgcagtcatggctcaatgaagttgtgacttcccatgcataagcaatcctcccatctaagcctcctgagtagctgaaactat i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6301685 134 + 6628207 --------ttttttgagatagagtctctccctctgttacccatggggctggagtgcaatggtacaatcatggctcaatgcagttgtgacttcccatgcataattgatcctcccatctcagcctcctgagtagctgaaactat i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9242188 132 - 10531588 --------ttttttgagatagag--tcttgctctgttacccatggggctggagtgcaatggtgcaatcatggctcaatgcagttgtgacttcccatgtataagcgatccccccatctcagcctcctgagtagctgaaactat i aotNan1.NW_018500622v1 I 9 C 0 s dasNov3.JH569970 894854 18 + 1009443 ----------------------------------------------------------------------------------------cttcatatg------------------------------------taaaatcat i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80425881 166 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e cebCap1.NW_016107433v1 3278188 59 - 5917169 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=22037.000000 s hg38.chr16_GL383557v1_alt 8129 2 + 89672 ag s panTro5.chr16 21434111 2 - 81586097 ag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500978 2 - 90481686 ag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733902 2 + 3010529 ag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841627 2 + 163208435 ag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320292 2 - 74971481 ag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031287 2 - 78541002 ag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425650 2 + 26466322 ag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20752972 2 + 43916225 ag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189591 2 + 75399963 ag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738836 2 - 7209941 ag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479594 2 + 3907144 ag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491568 2 - 44557958 ag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301819 2 + 6628207 ag i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9242320 2 - 10531588 ag i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426047 2 + 88915250 aa i canFam3.chr5 I 166 C 0 s dasNov3.JH569970 894872 2 + 1009443 aa i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e cebCap1.NW_016107433v1 3278188 59 - 5917169 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=176860.000000 s hg38.chr16_GL383557v1_alt 8131 21 + 89672 gtgcacaccatgctcagctaa s panTro5.chr16 21434113 21 - 81586097 gtgcacaccatgctcagctaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21500980 21 - 90481686 gtgcacaccatgctcagctaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733904 21 + 3010529 gtgcacaccatgctcagctaa i gorGor5.CYUI01000018v1 C 0 I 1 s nomLeu3.chr2 53841629 21 + 163208435 gtgcacaccatgctcagttaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320294 21 - 74971481 gtgcacaccatgctcagctaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031289 21 - 78541002 gtgcacaccatgctcagctaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425652 21 + 26466322 gtgcacaccatgctcagctaa i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20752974 21 + 43916225 gtgcacaccatgctcagctaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189593 21 + 75399963 gtgcacaccatgctcagctaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738838 21 - 7209941 gtgcacaccatgctcagctaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479596 21 + 3907144 gtgcacatcatgctcagctaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491570 20 - 44557958 g-gcccaccatgctcagctaa i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6301821 20 + 6628207 g-gcccaccatgctcagctaa i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9242322 20 - 10531588 g-gcccaccatgctcagctaa i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426049 21 + 88915250 aaGAATACAATTTTTCATTTG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 894874 0 + 1009443 C e cebCap1.NW_016107433v1 3278188 59 - 5917169 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=836687.000000 s hg38.chr16_GL383557v1_alt 8152 77 + 89672 ttttttttttttttt-aattgtagaggtgggatttcatcacgttgcccagact-ggtcttgaactcctgatctcatgca s panTro5.chr16 21434134 77 - 81586097 ttttttttttttttt-aattgtagaggtgggatttcatcacgttgcccagact-ggtcttgaactcctgatctcatgca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501001 74 - 90481686 ---tttttttttttt-aattgtagaggtgggatttcatcacgttgcccagact-ggtcttgaactcctgatctcatgca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 733926 77 + 3010529 ttttttttttttttt-aattgtagaggtgggatttcatcacgttgcccagact-ggtcttgaactcctgatctcatgca i gorGor5.CYUI01000018v1 I 1 C 0 s nomLeu3.chr2 53841650 76 + 163208435 -tttttttttttttt-aattgtagaggtgggatttcattacgttgccaagact-ggtcttgaactcctgatctcatgca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320315 77 - 74971481 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031310 77 - 78541002 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425674 77 + 26466322 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i macNem1.NW_012011355v1 I 1 C 0 s cerAty1.NW_011999143v1 20752995 75 + 43916225 --ttttttttttttt-aattgtagcggtgggatttcatcacgttgcccagact-ggtcttgaactcctgatctcatgca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189614 78 + 75399963 tttttttttttttttcaattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738859 77 - 7209941 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479617 77 + 3907144 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagagt-ggtcttgaactcctgatctcatgca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491591 77 - 44557958 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6301841 76 + 6628207 tttttttttttttta-aattgtagagttgggatttcatcatgttgcccagact-ggt-ttgaactcctgatctcatgca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278247 77 - 5917169 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagaat-ggtcttgaactcctgatctcatgca i cebCap1.NW_016107433v1 I 59 C 0 s aotNan1.NW_018500622v1 9242342 77 - 10531588 ttttttttttttttt-aattgtagaggtgggatttcatcatgttgcccagact-ggtcttgaactcctgatctcatgca i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426070 63 + 88915250 TATCTtttttttttt-aagt---------agactcca------tgcacaatgtgggtcttgatctcacgatcctgtgaa i canFam3.chr5 C 0 I 171 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 894874 0 + 1009443 C e otoGar3.GL873566 13662913 1454 + 13852661 I a score=576659.000000 s hg38.chr16_GL383557v1_alt 8229 58 + 89672 atcctcccaccgtggcctcccaaagtactgggattataggcgtgagc----c---------accatgccca s panTro5.chr16 21434211 58 - 81586097 atcctcccaccgtggcctcccaaagtactgggattataggcgtgagc----c---------accgtgccca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501075 58 - 90481686 atcctcccaccgtggcctcccaaagtactgggattataggcgtgagc----c---------accgtgccca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734003 58 + 3010529 atcctcccaccttggcctcccaaagtactgggattataggcgtgagc----c---------accgtgccca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841726 57 + 163208435 atcctcccacctt-gcctcccaaagtactgggattacaggcgtgagc----c---------actgtgccca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320392 58 - 74971481 atcctcccaccttggcctcccaaagtactgggattataggcgtgagc----c---------accatgccca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031387 58 - 78541002 atcctcccaccttggcctcccaaagtactgggattataggcgtgagc----c---------accatgccca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425751 58 + 26466322 atcctcccaccttggcctcccaaagtactcggattataggcgtgagc----c---------accatgccca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753070 58 + 43916225 atcctcccaccttggcctcccaaagtactgggattataggcgtgagc----c---------accatgccca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189692 58 + 75399963 atcctcccaccttggcctcccaaagtactgggattataggtgggagc----c---------accatgccca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738936 62 - 7209941 atcctcccaccttggcctcccaaagtactgggattataggcatgagcttttt---------accatgccca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479694 58 + 3907144 atcctcccaccttggcctcccaaagtactgggattataggtgtgagc----c---------accgtgccca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491668 58 - 44557958 atcctcccaccttggcctcctaaagtactgggattataggcgtgagc----c---------actgggccca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301917 58 + 6628207 atcctcccaccttggcctcctaaagtactggaattataggtgttagc----c---------actgtgccca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278324 67 - 5917169 atcctcccaccttggcctcctaaagtactgggattatagctgttagc----ctgtaatcatactgtgccca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242419 58 - 10531588 gtcctcccaccttggcctcctaaagtactgggattatagatgtgagc----c---------actgtgccca i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80426133 171 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 894874 0 + 1009443 C e otoGar3.GL873566 13662913 1454 + 13852661 I a score=202511.000000 s hg38.chr16_GL383557v1_alt 8287 18 + 89672 gccTGATTtcaatttctt s panTro5.chr16 21434269 18 - 81586097 gccTGATTtcaatttctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501133 18 - 90481686 gccTGATTtcaatttctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734061 18 + 3010529 gccTGATTtcaatttctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841783 18 + 163208435 gccTGATTtcaatttctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320450 18 - 74971481 gccTGATTttaatttctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031445 18 - 78541002 gcctgattttaatttctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425809 18 + 26466322 gccTGATTttaatttctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753128 18 + 43916225 gccTGATTtcaatttctt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189750 18 + 75399963 gccTGATTttaatttctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6738998 18 - 7209941 gccTGATTttaatttctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479752 18 + 3907144 gccTGATTttaatttctt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491726 18 - 44557958 gccTGATTtcaatttcct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301975 18 + 6628207 gccTGATTTCAATTTCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278391 18 - 5917169 gccCGATTtcaatttctt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242477 18 - 10531588 gccTGATTtcaatttctt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426304 18 + 88915250 gtcttaattacatttctt i canFam3.chr5 I 171 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 894874 0 + 1009443 C e otoGar3.GL873566 13662913 1454 + 13852661 I a score=733490.000000 s hg38.chr16_GL383557v1_alt 8305 73 + 89672 tatatataaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-aataa s panTro5.chr16 21434287 71 - 81586097 tatatataaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaac--gtgaaa-aataa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501151 71 - 90481686 tatatataaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaac--gtgaaa-aataa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734079 73 + 3010529 tatatataaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-aataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841801 73 + 163208435 tatatataaaatca----taatacctat-ccttagggaattattataaagattaagtgaattaacttgtgaaa-agtaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320468 73 - 74971481 tatatgtaaaatct----taatacctat-ccttagggaattattatgaagattaagtgaattaatttgtgaaa-aataa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031463 73 - 78541002 tatatgtaaaatct----taatacctat-ccttagggaattattatgaagattaagtgaattaatttgtgaaa-aataa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425827 73 + 26466322 tatatgtaaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-aataa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753146 73 + 43916225 tatatgtaaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-aataa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189768 73 + 75399963 tatatgtaaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-tataa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739016 73 - 7209941 tatatgtaaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-aataa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479770 73 + 3907144 tatatgtaaaatca----taatacctat-ccttagggaattattatgaagattaagtgaattaacttgtgaaa-aataa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491744 73 - 44557958 tatatgt-aaatca----taatacctat-ccttagggaattattatgaaaattaagtgaattaatttgtaaaataagaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6301993 69 + 6628207 TGTATGT-AAATC-------Atacctat-ccttagggaattattatgaaaattaagtgaattgatttgtaaaa-aagaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278409 69 - 5917169 tatatgt-aaatc-------atatctat-ccttagggaattattacgaaaattaagtgaattaatttgtaaaa-aggaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242495 72 - 10531588 tatgtgt-aaatca----taatacctat-ccttagggaattattatgaaaattaagtgaattaatttataaaa-aagaa i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426322 77 + 88915250 tagattgaagtttatatgtaaagcctgc-ccttagagggttattgtgaagattaaatgaattaaagtatggaa-aagga i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 894874 57 + 1009443 ---------------------tatctataccctctggggttattatgaggattaactgagttaatatatagaa-aagga i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435313 291 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=2206875.000000 s hg38.chr16_GL383557v1_alt 8378 182 + 89672 ttttaaaaattgtgaaagccatacaaatttcaggtattaccattattACCTAATTCAGCAGAACTTG----ACATTTTCATGGATTTCAGAAATTGACAGagtacatggtaaagagcagg----agctcagtaagtgtttactgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAAGAAGTATTATC s panTro5.chr16 21434358 182 - 81586097 ttttaaaaattgtgaaagccatacaaatttcaggtattaccattattACCTAATTCAGCAGAACTTG----ACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttactgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAAGAAGTATTATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501222 182 - 90481686 ttttaaaaattgtgaaagccatacaaatttcaggtattaccattGGTACCTAATTCAGCAGAACTTG----ACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttactgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAAGAAGTATTATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734152 182 + 3010529 ttttaaaaattgtgaaagccatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTG----ACATTTTCATGGATTTCAGAAATTGACAGGgtacatggtaaagagcagg----agctgaataagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAAGAAGTATTATC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53841874 178 + 163208435 ttttaaaaattgtgaaagccatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTG----ACATTTTCATGGATTTCGGACATTGACAGGGTACATGGTAAAGAGCAGG----AGCTC----AGTGTTTATTGAATGAATT--A----ACAAA-ATAATTAGAACCTCCTTCCAAGCAGTATTATC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320541 186 - 74971481 ttttaaaaactgtgaaagtcatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTGACAAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAATAAGTATTATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031536 186 - 78541002 ttttaaaaactgtgaaagtcatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTGACAAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAATAAGTATTATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14425900 186 + 26466322 ttttaaaaactgtgaaagtcatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTGACAAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAATAAGTATTATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753219 186 + 43916225 ttttaaaaactgtgaaagtcatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTGACGAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAATAAGTATTATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58189841 186 + 75399963 ttttaaaaactgtgaaagtcatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTGACAAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAATAAGTATTATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739089 186 - 7209941 tttttaaaactgtgaaagtcatacaaatttgaggtattaccattattACCTAATTCAGCAGAACTTGACAAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-ATAATTAGAACCTCCTTCCAATAAGTATTATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 479843 186 + 3907144 ttttaaaaattgtgaaagtcatacaaatttgaggtattaccaatattACCTAATTCAGTAGAACTTGACAAACATTTTCATGGATTTCAGAAATTGacagggtacatggtaaagagcagg----agctcagtaagtgtttattgaatgaatt--a----aCAAA-AGAATTAGAATCTCCTTCCAATAAGTATTATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21491817 190 - 44557958 ttttaaaaattgtaaaagccatacaaatttgaggcattaccattactACCTAATACAGCAGAACTTGACAAATATTTTCATGGATTTCAGAAATTAATAGGGTCCATGGTAAAGAGTAGGAGCAAGCACAGTAAGTGTTTATTAAATGAATT--A----ACAAA-ATGATTAGAACCTCCTTCCAAAAAGCATTATC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302062 190 + 6628207 ttttaaaaattgtaaaagccatacaaatttgaggcattaccattattACCTAATACAGCAGAACTTGACAAATATTTTCATGGATTTCAGAAATTAACAGGGTCCATGGTAAAGAGCAAGAGCAAGCACAGTAAGTGTTTATTAAATGAATT--A----ACAAA-ATGATTAGAACCTCGTTCCAAGAAGCATTATC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278478 189 - 5917169 ttttaaaaattgtaaaagccatacaaatttgaggcattaccattattACCTAATACAGCAGAACTTGACAAATATTTTCATGGATTTCAGAAATTAACA-GGTCCATGGTAAAGAGCAGGAACAAGCACAATAAGTGTTTATTAAATGAATT--A----ACAAA-ATGATTAGAACCTCCTTCCAAGAAGCATTATC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242567 190 - 10531588 ttttaaaaattgtaaaagctatacaaatttgaagcattaccattattACCTAATACAGCAGAACGTGACAAATATTTTCATGGATTTCAGAAATTAACAGGGTCCATGGTAAAGAGCAGGAGCAAGCACAGTAAGTGTTTATTAAATGAATT--A----ACAAA-ATGATTAGAATCTCCTACCAAGAAGCATTATC i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22435604 179 - 129401213 ttttggaaactgt-aaagccatacagatttggagcat---catttttactCAATATAGCA-AACTTG----ACATTTTTACATGCTTCAGAAATTAGTccaatacatagcaaagaatatg----tgctcaataagtgtttattgtatgaatTTGT----GCACA-ATAGTTAGGAACTCTTCCTAAGAAGTATTATC i mm10.chr8 I 291 I 478 s canFam3.chr5 80426399 185 + 88915250 ttttagaaattgtagaagccataccagtttgagatattactgttattACCTAAT---GCAGACCTTGACAATCATTTTCACCAGGTTCAGAAATTagcatggtacatggcaaaaagcagg----tgctca--aagtgcttattaaatgaatT--AGTGTACAAACCTGGCTAAGACCTCTTCCCAAGGA-CATTAAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 894931 179 + 1009443 ttttagaaattatgaaagtcataaaaatctgag----tattatttttACCTAATGCA--AAAATCTGACATACAGCTTCACCACTTTCAGAAATTAATACAGTACATGGCAAACAACAAG----TGCCTA-TAAGTGCTGAATGAATTAATG--T----GCAAA-ACAGTTAAGATCTCTACCCAAAAACCATTATC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=229649.000000 s hg38.chr16_GL383557v1_alt 8560 24 + 89672 TTATATA-CAT-AATGggctgggtgc s panTro5.chr16 21434540 24 - 81586097 TTATATA-CAT-AATGggctgggtgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501404 24 - 90481686 TTATATA-CAT-AATGggctgggtgc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734334 24 + 3010529 TTATATA-CAT-AATGggctgggtgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842052 24 + 163208435 GTATATA-CAT-AATGggctgagtgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320727 24 - 74971481 TTATATA-CAT-AATGCgctgggtgc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031722 24 - 78541002 TTATATA-CAT-AATGCgctgggtgc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426086 24 + 26466322 TTATATA-CAT-AATGCgctgggtgc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753405 24 + 43916225 TTATATA-CAT-AATGggctgggtgc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190027 24 + 75399963 TTACATA-CAT-AATGggctgggtgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739275 24 - 7209941 TTATATA-CAT-AATGggctgggtgc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480029 24 + 3907144 TTATATA-CAT-AATGggctgggtgc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492007 25 - 44557958 TTATATA-CCTAAATGAgctgggggt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302252 25 + 6628207 TTATATA-CCTAAATGAgctgggtac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278667 25 - 5917169 TTATATA-CGTAAATGAgctgggtgt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242757 25 - 10531588 TTATATA-CCTAAATGAgctgggtgc i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426584 23 + 88915250 --ATATAGCAT-AATGGATTACATGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 895110 23 + 1009443 --ATATAACAT-GATGGATTACATGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=52626.000000 s hg38.chr16_GL383557v1_alt 8584 5 + 89672 agtgg s panTro5.chr16 21434564 5 - 81586097 agtgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501428 5 - 90481686 agtgg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734358 5 + 3010529 agtcg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842076 5 + 163208435 agtgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320751 5 - 74971481 agtgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21031746 5 - 78541002 agtgg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426110 5 + 26466322 agtgg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753429 5 + 43916225 agtgg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190051 5 + 75399963 agtgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739299 5 - 7209941 agtgg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480053 5 + 3907144 agtgg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492032 5 - 44557958 ggtgg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302277 5 + 6628207 ggtgg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278692 5 - 5917169 ggtgg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242782 5 - 10531588 ggtgg i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 895133 5 + 1009443 GATGG i dasNov3.JH569970 C 0 I 5 e canFam3.chr5 80426607 0 + 88915250 C e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=1073027.000000 s hg38.chr16_GL383557v1_alt 8589 112 + 89672 ctcctgtctgttaatccctgtattttgtgaggccgaggacagaggacggcttgagcccagaagttcaggaccagcctgggtaacatggtaagacctccccaccctcatctct s panTro5.chr16 21434569 112 - 81586097 ctcctgtctgttaatccctgtattttgtgaggccgaggacagaggacggcttgagcccagaagttcgggaccagcctgggtaacacggtaagacctccccaccctcatctct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501433 112 - 90481686 ctcctgtctgttaatccctgtattttgtgaggccgaggacagaggacggcttgagcccagaagttcgggaccagcctgggtaacacggtaagacctccccaccctcatctct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734363 112 + 3010529 ctcctgtctgttaatccctgtattttgtgaggccgaggacagaggacggcttgagcccagaagttcgggaccagcctgggtaacatggtaagacctccccaccctcatctct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842081 112 + 163208435 ctcctgtctgttaatccctgcactttgtaaggccaaggacggaggacagcttgagcccagaagttcgggaccagcctgggtaacatagtaagacctccccaccctcatctct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21320756 111 - 74971481 ctcctgtctg-taatccccgcactttgtgaggccaaggccagaggatggcttgagcccagaagttcgggaccagcctgggtaacatagtaagacctcctcaccctcatctct i rheMac8.chr20 C 0 I 2792 s macFas5.chr20 21031751 111 - 78541002 ctcctgtctg-taatccccgcactttgtgaggccaaggccagaggatggcttgagcccagaagttcgggaccagcctgggtaacatagtaagacctcctcaccctcatctct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426115 111 + 26466322 ctcctgtctg-taatccccgcactttgtgaggccaaggccagaggatggcttgagcccagaagttcaggaccagcctgggtaacatagtaagacctcctcaccctcatctct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753434 111 + 43916225 ctcctgtctg-taatccccgcactttgtgaggccaaggccagaggatggcttgagcccagaagttcgggaccagcctgggtaacatagtaagacctcctcaccctcatctct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190056 111 + 75399963 ctcctgtctg-taatccccgcactttgtgaggccaaggccagaggatggcttgagcccagaagttccggaccagcctgggtaacatagtaagacctcctcaccctcatctct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739304 111 - 7209941 ctcctgtctg-taatccccgcactttgtgaggccaaggccagaggatggcttgagcccagaagttcgggaccagcctgggtaacatagtaagacctcctcaccctcatctct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480058 111 + 3907144 ctcctgtctg-taatccctgcactttgtgaggccaaggccagaggatggcttgagcccagaagttcgggaccagcctgggtaacatagtaagacctccccaccctcatctct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492037 100 - 44557958 atcctgtctg-taatccttgcactttgagagaccaa-----------ggcttgaaccaaggagttcaggaccagcctggttagcataggaagaccacctcacccccatctct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302282 111 + 6628207 ctcctgtctg-taatccctgcactttgagagaccaaggcttgaggatggcttgagcccaggaattcaggaccagcctggttaacatagtaagacctcctcACCCGCATCTCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3278697 111 - 5917169 ttcctgtctg-taatccctgcactttgagagaccaaggcttgaggatggcttgagcccaggagttcaggaccagcctggttaacatagtaagacctcctcacccccatctct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242787 111 - 10531588 ctcctgtctg-taatccctgcactttgagagaccaaggcttgaggatggcttgagcccaggagttcaggaccagtctgattaacatagtaagacctcctcacccccatctct i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80426607 0 + 88915250 C e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895138 5 + 1009443 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=132649.000000 s hg38.chr16_GL383557v1_alt 8701 18 + 89672 acaaatttttttcttttt s panTro5.chr16 21434681 18 - 81586097 acaaatttttttcttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501545 18 - 90481686 acaaatttttttcttttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734475 18 + 3010529 acaaatttttttcttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842193 15 + 163208435 acaaattttt---ttttt i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21031862 18 - 78541002 acaaatttttttcttttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426226 18 + 26466322 acaaatttttttcttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753545 18 + 43916225 acaaatttttttcttttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190167 18 + 75399963 acaaatttttttcttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739415 18 - 7209941 acaaatttttttcttttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480169 18 + 3907144 acaaatttttttcttttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492137 17 - 44557958 acaattttttttttttt- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302393 18 + 6628207 ACAAtttttttttttttt i saiBol1.JH378225 C 0 I 285 s cebCap1.NW_016107433v1 3278808 15 - 5917169 acaaatttttttttt--- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242898 18 - 10531588 acaatttttttttttttt i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80426607 0 + 88915250 C e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895138 5 + 1009443 I e rheMac8.chr20 21320867 2792 - 74971481 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=921784.000000 s hg38.chr16_GL383557v1_alt 8719 115 + 89672 aattagccaggcacagtggtgc--ataccggtggtcctagctactcaggaggctgaggtgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg s panTro5.chr16 21434699 115 - 81586097 aattagccaggcacagtggtgc--ataccggtggtcctagctactcaggaggctgaggtgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacaccactg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501563 115 - 90481686 aattagccaggcacagtggtgc--ataccggtggtcctagctactcaggaggctgaggtgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacaccactg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734493 115 + 3010529 aattagccaggcacagtggtgc--ataccagtggtcctagctactcaggaggctgaggtgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842208 115 + 163208435 aattagccaggcacagtggtgc--atacctgtggtcctagctactcaggaggctgaggtgcaaggatcacttgagcctgagagtttgaggttgcagtgagctgtgatcacgacacta i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21031880 115 - 78541002 aattagccaggcgcagtggtgc--atacctgtggtcctagctactcaggaggctgaggcgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg i macFas5.chr20 C 0 I 991 s macNem1.NW_012011355v1 14426244 115 + 26466322 aattagccaggcgcagtggtgc--atacctgtggtcctagctactcaggaggctgaggcgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753563 117 + 43916225 aattagccaggcgcagtggtgcatatacctgtggtcctagctactcaggaggctgaggcgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190185 115 + 75399963 aattagccaggtgcagtggtgc--atacctgtggtcctagctactcaggaggctaaggcgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739433 115 - 7209941 aattagccaggcgcagtggtgc--atacctgtggtcctagctactcaggaggctgaggcgcaaggatcacttgagcctgagagtttgaggctgcagtgagctgtgatcacgccactg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480187 115 + 3907144 aattagccaggcgcagtggtgc--atacctgtggtcctagctactcaggaggctgaggcgcaaggatcacttgagcctgagagttcgaggctgcagtgagctgtgatcacgccactg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492154 115 - 44557958 aattaggcaggcaccgtggtgc--atacctgtggtcctggctactcaggaggctgaggtgcaaggatcacttgagcctgagagttcaagactgcagtgagctgtgatcacaccactg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3278823 115 - 5917169 aattaggcaggcacagttgtgt--atacctgtggtcctggctactcaggaggccgagatgcaaggatcacttgagtctgagagttcaagactgcagtgagctgtgatcacaccactg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9242916 115 - 10531588 aattaggcaggcacagtggtgc--atacctgtggtcctggctactcaaaaggctgaggtgcaaggatcacttgagcctgagagttcaagactgcagtgagctgtgatcacaccactg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80426607 0 + 88915250 C e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895138 5 + 1009443 I e rheMac8.chr20 21320867 2792 - 74971481 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=78843.000000 s hg38.chr16_GL383557v1_alt 8834 12 + 89672 cactccagcctg s panTro5.chr16 21434814 12 - 81586097 cactccagcctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501678 12 - 90481686 cactccagcctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734608 12 + 3010529 cactccagcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842323 12 + 163208435 cactccagcctg i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012011355v1 14426359 12 + 26466322 cactcctgcctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753680 12 + 43916225 cactcctgcctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190300 12 + 75399963 cactctagcctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739548 12 - 7209941 cactcctgcctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480302 12 + 3907144 cactccagcctg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492269 12 - 44557958 tactccagcctg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3278938 12 - 5917169 tactccagcctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243031 12 - 10531588 tactccagcctg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80426607 0 + 88915250 C e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895138 5 + 1009443 I e rheMac8.chr20 21320867 2792 - 74971481 I e macFas5.chr20 21031995 991 - 78541002 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=59513.000000 s hg38.chr16_GL383557v1_alt 8846 8 + 89672 ggtgacag s panTro5.chr16 21434826 8 - 81586097 ggtgacag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501690 8 - 90481686 ggtgacag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734620 8 + 3010529 ggtgacag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842335 8 + 163208435 ggtgacag i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012011355v1 14426371 8 + 26466322 ggcgacag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753692 8 + 43916225 ggcgacag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190312 8 + 75399963 ggcgacag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739560 8 - 7209941 ggcgacag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480314 8 + 3907144 ggtgacag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492281 8 - 44557958 ggcgacag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3278950 8 - 5917169 ggcaacag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243043 8 - 10531588 ggtgacag i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426607 8 + 88915250 GGTGATAA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895138 5 + 1009443 I e rheMac8.chr20 21320867 2792 - 74971481 I e macFas5.chr20 21031995 991 - 78541002 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=151803.000000 s hg38.chr16_GL383557v1_alt 8854 21 + 89672 atcaggaccctgtatcaaaaa s panTro5.chr16 21434834 21 - 81586097 atcaggaccctgtatcaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501698 21 - 90481686 atcaggaccctgtatcaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734628 21 + 3010529 atcaggaccctgtatcaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842343 21 + 163208435 atcaggaccctgtatcaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323659 21 - 74971481 atcaggaccttttaTCAAAAG i rheMac8.chr20 I 2792 C 0 s macNem1.NW_012011355v1 14426379 21 + 26466322 atcaggaccctgtatcaaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753700 21 + 43916225 atcaggaccctgtatcaaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190320 21 + 75399963 atcaggaccctgtatcaaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739568 21 - 7209941 atcaggaccctgtatcaaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480322 21 + 3907144 atcaggaccctgtatcaaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492289 21 - 44557958 accaggactctatctcaaaaa i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3278958 21 - 5917169 accaggaccctgtctcaaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243051 21 - 10531588 accaggaccctgtctcaaaaa i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426615 6 + 88915250 -------------TTCAGA-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895138 5 + 1009443 I e macFas5.chr20 21031995 991 - 78541002 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=31028.000000 s hg38.chr16_GL383557v1_alt 8875 5 + 89672 caaaa s panTro5.chr16 21434855 5 - 81586097 caaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501719 5 - 90481686 caaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734649 5 + 3010529 caaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842364 5 + 163208435 caaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323680 5 - 74971481 CAAAT i rheMac8.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426400 5 + 26466322 caaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753721 5 + 43916225 caaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190341 5 + 75399963 caaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739589 5 - 7209941 caaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480343 3 + 3907144 caa-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492310 5 - 44557958 caaaa i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3278979 5 - 5917169 cagaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243072 5 - 10531588 caaaa i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 895143 5 + 1009443 CACAG i dasNov3.JH569970 I 5 C 0 e canFam3.chr5 80426621 0 + 88915250 C e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e macFas5.chr20 21031995 991 - 78541002 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=1848677.000000 s hg38.chr16_GL383557v1_alt 8880 193 + 89672 gaaaaaCCTCTGAGCCTTTCTGTATCTGATCTATGCATGCAATAGAACTGCTGTGAGGGTTAATGAGATAAAGCGCATAAAGCAAGCC-AGGACTCTAAAGAAACATGTTCCTCTCAGCACC----TTCTTAAATATATGAACCTGTCACACTAACATCATAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTATAATA s panTro5.chr16 21434860 193 - 81586097 gaaaaaCCTCTGAGCCTTTCTGTATCTGATCTATGCATGCAATAGAACTGCTGTGAAGGTTAATGAGATAAAGCGCATAAAGCAAGCC-AGGACTCTAAAGAAACATGCTCCTCTCAGCACC----TTCTTAAATATATGAACCTGTCACACTAACATCATAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTATAATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501724 193 - 90481686 gaaaaaCCTCTGAGCCTTTCTGTATCTGATCTATGCATGCAATAGAACTGCTGTGAAGGTTAATGAGATAAAGCGCATAAAGCAAGCC-AGGACTCTAAAGAAACATGCTCCTCTCAGCACC----TTCTTAAATATATGAACCTGTCACACTAACATCATAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTATAATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734654 182 + 3010529 gaaaaaCCTCTGAGCCTTTCTGTATCTGATCTATGCATGCAATAGAACTGCTGTGAGGGTTAATGAGATAAAGCGCATAAAGCAAGCC-AGGACTCTAAAGAAACATGCTCCTCTCAGCACC----TTCTTAAATATATGAGCCTG-----------TCATATAGGCCA-GAAAAAAACTGAAAATTCAAGTTATAATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842369 193 + 163208435 gaaaaaCCTCTGAGCCTTTCTGAAGCTGACCTATGCATGCAATAGAACTGCTGTGACAGTTAATGAGATAAAGCGCATAACGCAAGCC-AAGACTCTAAAGAAACATGCTCCTCTCAGCACC----TTCTTAAATATATGAGCCTGTCACATTAACATCATAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323685 188 - 74971481 GAAAAACCTACAAGCCTTTTTGAATCTG-----TGCATTCAATAGAACTTCTGTAAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATATGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21032986 188 - 78541002 GAAAAACCTCTGAGCCTTTTTGAATCTG-----TGCATTCAATAGAACTTCTGTAAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATATGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAATA i macFas5.chr20 I 991 C 0 s macNem1.NW_012011355v1 14426405 188 + 26466322 gaaaaaCCTCTGAGCCTTTTTGAATCTG-----TGCTTGCAATAGAACTTCTGTAAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATATGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753726 188 + 43916225 gaaaaaCCTCTGAGCCTTTTTGAATCTG-----TGCATGCAATAGAACTTCTGTGAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATATGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190346 188 + 75399963 gaaaaaCCTCTGAGCCTTTTTGAATCTG-----TGCATGCAATAGAACTTCTGTGAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATATGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTTTAATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739594 187 - 7209941 gaaaaaCCTCTGAGCCTTTTTGAATCTG-----TGCATGCAATAGAACTTCTA-GAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATATGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480346 193 + 3907144 gaaaaaCCTCTGAGCCTTTTTGAATCTGACCTATGCATGCAATAGAACTGCTGTGAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAAGAAACATACTCCTCTCAGCACC----TTCTTAAATATGTGAGCGTGTCACACTAACATCACAAAGGCCA-GAAAAAAGCTGAAAATTCAAGTTGTAATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492315 193 - 44557958 gaaaaaTCTCTGAGCCTTTCTGAGTCTGACCTATTTACATAAGAGAACTGCTGTGAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAGGAAACATGCTTCTCTCAGTACC----TTCTTGAATATGTAAGCCTGTCACACTAACATCACAAAGGCCA-GAATAAAGCTGAAAATTCAAGTAGTAATA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3278984 193 - 5917169 gaaaaaTCTCTGAGCCTTTCTGAGTCTGACCTATTTACATAAGAGAACTGCTGTGAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAGGAAACATGCTCCTCTCAGTACT----GTCTTGAATATGTAAGCCTGTCACACTAACATCACAAAGGCCA-GAATAAAGCTGAAAATTCAAGTAGTAATA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243077 193 - 10531588 gaaaaaTCTCTGAGCCTTTCTGAGTCTGATCTATTTACATAAGAGAACTGCTGTGAGGGTTAATGAGATAAAGCTCATAAAGCAAGCC-AGGACTCTAAGGAAACATGCTCCTCTCAGTACC----TTCTTGAATATGTAAGCCTGTCACACTAACATCACAAAGGCTA-GAATAAAGCTGAAAATTCAAGTAGTAATA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80426621 194 + 88915250 AATAAACCACTGTGCCTTTCTGAGTCTGACCCGTACACACCAGACAACTACTGTGAGGGTTAATGAGATAAAGCTCACAAAGGTGGCC-AGTGCTCCCGGAAAAAAGGGTCCTCTCAGGACCACTGTTCTTAAATATATAAGCCTGTCACACAAAGGACATAGAG--CA-AAATAAAGCTG-AAATTCAAGTGGTAATA i canFam3.chr5 C 0 I 277 s dasNov3.JH569970 895148 194 + 1009443 AAATGACCACTGTGCATTTCTGAGTCCAACCT-CCCACACCAGAGAGCTACTGTGAGGGTTCATTTGATAAAGCTCACAACCGAGACCTGGGGCTCTAAGGAAAGAGGCTCCTCTCAGTACTGCCATTCTTGAATGTAAGAA--TATCACACCAA--TCACAAAGGCCATGATAAAAGCTGAAAATTCAAATGGCAACA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=24000.000000 s hg38.chr16_GL383557v1_alt 9073 2 + 89672 GC s panTro5.chr16 21435053 2 - 81586097 GC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501917 2 - 90481686 GC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734836 2 + 3010529 GC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842562 2 + 163208435 GC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323873 2 - 74971481 GC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033174 2 - 78541002 GC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426593 2 + 26466322 GC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753914 2 + 43916225 GC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190534 2 + 75399963 GC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739781 2 - 7209941 GC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480539 2 + 3907144 GC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492508 2 - 44557958 GC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279177 2 - 5917169 GC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243270 2 - 10531588 GC i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 895342 2 + 1009443 GC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80426815 277 + 88915250 I e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=19149.000000 s hg38.chr16_GL383557v1_alt 9075 2 + 89672 TT s panTro5.chr16 21435055 2 - 81586097 TT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501919 2 - 90481686 TT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734838 2 + 3010529 TT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842564 2 + 163208435 TT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323875 2 - 74971481 TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033176 2 - 78541002 TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426595 2 + 26466322 TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753916 2 + 43916225 TT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190536 2 + 75399963 TT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739783 2 - 7209941 TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480541 2 + 3907144 TT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492510 2 - 44557958 TT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279179 2 - 5917169 TT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243272 2 - 10531588 CC i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80427092 2 + 88915250 TT i canFam3.chr5 I 277 C 0 s dasNov3.JH569970 895344 2 + 1009443 CT i dasNov3.JH569970 C 0 I 1038 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=248428.000000 s hg38.chr16_GL383557v1_alt 9077 35 + 89672 TGGTACCGCACACACATCCA------------------------CAAATCTTTA-AAACG s panTro5.chr16 21435057 35 - 81586097 TGGTACCGCACACACATCCA------------------------CAAATCTTTA-AAACG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501921 35 - 90481686 TGGTACCGCACACACATCCA------------------------CAAATCTTTA-AAACG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734840 35 + 3010529 TGGTACCTCACACATATCCA------------------------CAAATCTTTA-AAACG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842566 34 + 163208435 TGGTACCA-ACACACATCTA------------------------CAAATCTTTA-AAACG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323877 35 - 74971481 TGGTAGCACACACACATCCA------------------------CAAATCTTTA-AAACG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033178 35 - 78541002 TGGTAGCACACACACATCCA------------------------CAAATCTTTA-AAACG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426597 35 + 26466322 TGGTAGCACACACACATCCA------------------------CAAATCTTTA-AAACG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753918 35 + 43916225 TGGTAGCACACACACATCCA------------------------CAAATCTTTA-AAACG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190538 35 + 75399963 TGGTAGCACACACACATCCA------------------------CAAATCTTTA-AAACG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739785 35 - 7209941 TGGTAGCACACACACATCCA------------------------CAAATCTTTA-AAACG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480543 35 + 3907144 TGGTACCGCACACACATCCA------------------------CAAATCTTTA-AAACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492512 27 - 44557958 TGGTACCACACACACACAAA--------------------------------TA-AAGTA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279181 59 - 5917169 TGGTACcacacacacacacacacacacacacacacacacacacacaAATCTTTA-AAATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243274 30 - 10531588 ---TACCACACACACACACA--------------------------AATCTTTA-AAATG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80427094 30 + 88915250 TGATACCGTACATA------------------------------CCAACCTGTACAAATG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54898612 739 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911332 134 + 9850184 I e dasNov3.JH569970 895346 1038 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=870375.000000 s hg38.chr16_GL383557v1_alt 9112 71 + 89672 CCCCAGTGCTCTAATTTAATAATTAAGTTTTT-AGTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT s panTro5.chr16 21435092 71 - 81586097 TCCCAGTGCTCTAATTTAATAATTAAGTTTTT-AGTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21501956 71 - 90481686 TCCCAGTGCTCTAATTTAATAATTAAGTTTTT-AGTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734875 71 + 3010529 CCCCAGTGCTCTAATTTAATAATTAAGTTTTT-AGTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842600 71 + 163208435 CCCCAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAAAGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323912 71 - 74971481 CCCTAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033213 71 - 78541002 CCCTAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426632 71 + 26466322 CCCTAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20753953 71 + 43916225 CCCTAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190573 71 + 75399963 CCCTAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTAGAAATCCTGGAAGCAGAAGAATGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739820 71 - 7209941 CCCTGGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480578 71 + 3907144 CCCTAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGCAGAAGAATGGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492539 71 - 44557958 CCCCAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGTAGAAGAATGCT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279240 71 - 5917169 CCCCAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGGAAATCCTGGAAGTAGAATAATGCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243304 71 - 10531588 CCCCAGTGCTCTAATTTAATAATTAAGTTTTT-ATTTTCTGTTGGTGAAGATCCTGGAAGTAGAAGAATGCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54899351 70 + 72247402 CCCCAGTGCTCTAA-TTTACAATTATGTTTTT-ATTTTCTGTTGGTAGAAATCCTGAAAGTAGAAGAGTACT i micMur3.chr20 I 739 C 0 s proCoq1.NW_012152729v1 2911466 71 + 9850184 CCCCAGTATTCTAATTTTACAATTACGTTTTT-ATTTTCTGTTGGTGGAAATCCTGAAAGTAGAAGAGTGCT i proCoq1.NW_012152729v1 I 134 C 0 s canFam3.chr5 80427124 72 + 88915250 CCTCAGTTTTCTAATTTTACAATAATGTTTTTAATTTTCTGTTGGTGGAAATCTCAAAAGTAGAAAAGTGTG i canFam3.chr5 C 0 I 188 e mm10.chr8 22435783 478 - 129401213 I e dasNov3.JH569970 895346 1038 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=247652.000000 s hg38.chr16_GL383557v1_alt 9183 22 + 89672 AAACAAACATTATCTCAGTAAC s panTro5.chr16 21435163 22 - 81586097 AAACAAACATTATCTCAGTAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21502027 22 - 90481686 AAACAAACATTATCTCAGTAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734946 22 + 3010529 AAACAAACATTATCTCAGTAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842671 22 + 163208435 AAACAAACATTATCTTAGTAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21323983 22 - 74971481 CAACAAACATTATCTCACTAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033284 22 - 78541002 CAACAAACATTATCTCACTAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14426703 22 + 26466322 CAACAAACATTATCTCACTAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754024 22 + 43916225 CAACAAACATTATCTCACTAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58190644 22 + 75399963 CAACAAACATTATCTCACTAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6739891 22 - 7209941 CAACAAACATTATCTCACTAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 480649 22 + 3907144 CAACAAACATTATCTCACTAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21492610 22 - 44557958 AAACAAACATTATCTCAGCAAC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279311 22 - 5917169 AAACAAACATTATCTCAGCAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243375 22 - 10531588 AAACAAACATTATCTCAGCAAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54899421 22 + 72247402 AAACAAATACTATCCCAGCAAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2911537 22 + 9850184 AAACAAATACTATCCCAGCAAT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80427384 22 + 88915250 aaaaaAATACTATCTCAGCAAC i canFam3.chr5 I 188 C 0 e mm10.chr8 22435783 478 - 129401213 I e dasNov3.JH569970 895346 1038 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=32760.000000 s hg38.chr16_GL383557v1_alt 9205 3 + 89672 AAT s panTro5.chr16 21435185 3 - 81586097 AAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21502049 3 - 90481686 AAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734968 3 + 3010529 AAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842693 3 + 163208435 AAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324005 3 - 74971481 aat i rheMac8.chr20 C 0 I 127 s macNem1.NW_012011355v1 14426725 3 + 26466322 aat i macNem1.NW_012011355v1 C 0 I 297 s cerAty1.NW_011999143v1 20754046 3 + 43916225 aat i cerAty1.NW_011999143v1 C 0 I 127 s chlSab2.chr5 58190666 3 + 75399963 aat i chlSab2.chr5 C 0 I 127 s manLeu1.NW_012101698v1 6739913 3 - 7209941 aat i manLeu1.NW_012101698v1 C 0 I 299 s calJac3.chr20 21492632 3 - 44557958 AAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279333 3 - 5917169 AAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243397 3 - 10531588 AAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54899443 3 + 72247402 AAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2911559 3 + 9850184 AAT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80427406 3 + 88915250 AAT i canFam3.chr5 C 0 C 0 e mm10.chr8 22435783 478 - 129401213 I e dasNov3.JH569970 895346 1038 + 1009443 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=245286.000000 s hg38.chr16_GL383557v1_alt 9208 69 + 89672 GCAAAGAAG----TACCTGGAATGAGTAGGAGAACATACACGTATGAACCATAATGGCTTCTTTAATAGGAAA s panTro5.chr16 21435188 69 - 81586097 GCAAAGAAG----TACCTGGAATGAGTAGGAGAACATACACGTATGAACCATAATGGCTTCTTTAATAGGAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21502052 69 - 90481686 GCAAAGAAG----TACCTGGAATGAGTAGGAGAACATACACGTATGAACCATAATGGCTTCTTTAATAGGAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 734971 69 + 3010529 GCAAAGAAG----TACCTGGAATGAGTAGGAGAACATACACGTATGAACCATAATGGCTTCTTTAATAGGAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842696 69 + 163208435 GCAAAGAAG----TACCTGGAATGAGGAGGAGAACATATACGTATGAACCATAATGGCTTCTTTAATAGGAAG i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21492635 37 - 44557958 --------------------AATGAGTAG----------------GAACCATAATGGCTTATTTAATAGGCAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279336 69 - 5917169 ACAAAGAAG----CACCTGGAATGAGTAGGAGAACACACACATATGAACCATAACGGCTTATTTAAGAGGAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243400 69 - 10531588 ACAAAGAAG----CACCTGGAATGAGTAGAAGAACATACACATATGAACCATAATGGCTTATTTAATAGGAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54899446 73 + 72247402 GTAAAGAAGAGAATGTCTGGAATGAGCAGGAGAGCATACACATATGAACCATAACGGGTTCTTTAATAGGAAA i micMur3.chr20 C 0 I 2205 s proCoq1.NW_012152729v1 2911562 73 + 9850184 GCAAAGAAGAGAATGTCTGGAATGAGCAAGAGAGCATACACATATGAACCATAATGGGTTCTTTAATAGGAAA i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80427409 68 + 88915250 GCAAAGAGG---ATGCCTGGAATGATTAGGAAAGCATACA--TATGAAACATAATGGGTTCTTTAATAGGAAA i canFam3.chr5 C 0 C 0 e mm10.chr8 22435783 478 - 129401213 I e dasNov3.JH569970 895346 1038 + 1009443 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=19295.000000 s hg38.chr16_GL383557v1_alt 9277 14 + 89672 CATCTCACttttc-----t s panTro5.chr16 21435257 14 - 81586097 CATCTCACttttc-----t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21502121 14 - 90481686 CATCTCACttttc-----t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 735040 14 + 3010529 CATCTCACttttc-----t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842765 15 + 163208435 CATCTCACttttct----t i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21492672 19 - 44557958 CACCTTATATTTCTTTCCT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279405 19 - 5917169 CACCTTAtttttctttcct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243469 19 - 10531588 CACCTTAtttttctttcct i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2911635 14 + 9850184 TGTCTCCCTTTTC-----T i proCoq1.NW_012152729v1 C 0 I 765 s canFam3.chr5 80427477 8 + 88915250 TATCTCCT----------- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e dasNov3.JH569970 895346 1038 + 1009443 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=21351.000000 s hg38.chr16_GL383557v1_alt 9291 8 + 89672 ttttttat s panTro5.chr16 21435271 8 - 81586097 ttttttat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21502135 8 - 90481686 ttttttat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 735054 8 + 3010529 ttttttat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842780 8 + 163208435 ttttttac i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21492691 8 - 44557958 TTTATCAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279424 8 - 5917169 tttttcat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243488 8 - 10531588 tttttcat i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80427485 8 + 88915250 TTTTTTAT i canFam3.chr5 C 0 I 734 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 895346 1038 + 1009443 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=1166915.000000 s hg38.chr16_GL383557v1_alt 9299 562 + 89672 ttttagagacaatctttgtcacttaggctgaaatgcagtggcacaatcctacagccttgaattcctacagcctcaaattcctgggctcaagggatcctcccacctcagcctcccgtgtagctgggacaacaggcatgcatcaccacacctggctaattttttaatattttcatagagacaggctctcactgcattacccaggatggtAAGTAACCCTTACttaaagttaaaataggccgggcacagtggctcacgtctgtaatcccaacactttgggagggagtgggtggatcgtctgaggtgagtggatcatctgtggtcaggagttcgggaacagcctggccaacatggtgaaaccccatctctactgaaaatacagaattagtcaggcatggtggcacatgcctgtaatcccagctacctgggaggcttaggcaggagaatagcttaagtctaggaggtggaggttgcagtgaatcgagactgcaccactgcactccagcc---------tgggtgacagaacgagaccatatgtcaaaattaaat-----taaattaatattaagataaaAA s panTro5.chr16 21435279 562 - 81586097 ttttagagacaatctttgtcacttaggctgaaatgcagtggcacaatcctacagccttgaattcctacagcctcaaattcctgggctcaagggatcctcccacctcagcctcccgtgtagctgggacaacaggcatgcatcaccacacctggctaattttttaatattttcatatagacaggctctcactgcgttacccaggatggtAAGTAACCCTTACttaaagttaaaataggccgggcacagtggctcacgtctgtaatcccaacactttgggagggagtgggtggatcgtctgaggtgagtggatcatctgtggtcaggagttcgggaacagcctggccaacatggtgaaaccccatctgtactaaaaatacagaattagtcaggcatggtggcacatgcctgtaatcccagctacctgggaggcttaggcaggagaatcgcttaagtctaggaggtggaggttgcagtgagtcaagactgcaccactgcactccagcc---------tgggtgacagagcgagaccatatgtcaaaattaaat-----taaattaatattaagataaaAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21502143 562 - 90481686 ttttagagacaatctttgtcacttaggctgaaatgcagtggcacaatcctacagccttgaattcctacagcctcaaattcctgggctcaagggatcctcccacctcagcctcccgtgtagctgggacaacaggcatgcatcaccacacctggctaattttttaatattttcatagagacaggctctcactgcgttacccaggatggtAAGTAACCCTTACttaaagttaaaataggccgggcacagtggctcacgtctgtaatcccaacactttgggagggagtgggtggatcgtctgaggtgagtggatcatctgtggtcaggagttcgggaacagcctggccaacatggtgaaaccccatctgtactaaaaatacagaattagtcaggcatggtggcacatgcctgtaatcccagctacctgggaggcttaggcaggagaatcgcttaagtccaggaggtggaggttacagtgagtcaagactgcaccactgcactccagcc---------tgggtgacagagtgagaccatatgtcaaaattaaat-----taaattaatattaagataaaAA i panPan2.chr16 C 0 M 1346 s gorGor5.CYUI01000018v1 735062 561 + 3010529 ttttagagacaatctttgtcacttaggctgaaatgcagtggcacaatcctacagcctcgaattcctacagcctcaaattcctgggctcaagggatcctcccacctcagcctcccgtgtagctgggacaacaggcatgcatcaccaca-ctggctaattttttaatattttcatagagacaggctctcactgcgttacccaggatggtAAGTAACCCTTACttaaagttaaaataggctgggcacagtggctcacgtctctaatcccaacactttgggagggagtgggtggatcgtctgaggtgagtggatcatctgtggtcaggagttcgggaacagcctggccaacatggtgaaaccccatctctactaaaaatacagaattagtcaggcatggtggcacatgcctgtaatcccagctacctgggaggcttaggcaggagaatcacttaagtctaggaggtggaggttgcagtgagtcgagattgcaccactgcactccagcc---------tgggtgacagagcgagaccatatgtcaaaattaaat-----taaattaatattaagataaaAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53842788 570 + 163208435 ttttacagacaatctttgtcacctaggctgaaatgtagaggcacaatcccacagcctcgaattcctacagcctcaaattcctgggctcaagggatcctcccacctcagcctcccgtgtagctgggacaacaggcacacatcaccacacctggctaattttttaatattttcatagagacagggtctcattgtgttacccaggatggtAAGTAACCCTTAGttaaagttaaaataggccgggcacagtggctcacgcctgtaatcccaactcttcgggagggagtgggtggatcatctgaggtgggtggatcatctgaggtcaggagttcaagaacagcctggccaacatggtgaaaccccatctctactaaaaatacaaaattagtcaggcatggtggcacatgcctataatcccagctacctgggaggcttaggcaggagaatcacgtaagtctaggaggtggaggttacagtgagtcgagattgcacc-ctgcactccagcctgggtgacatgggtgacagagcgagaccatatctcaaaattaaat-----taaattaatattaagataaaAA i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21492699 536 - 44557958 TTTCAGAGACTATTtttgtcacctaggctgaaatgcagtggcacaatccgatagcctcaaactcctacaggctcaaactcctaagctcaaaagattctcccacctcagcctcccgtgtagctggaaccacaggcatgcatcaccatacccagctgctttttaaatattttcagagagacagggtctcactgtgttgcctaggctggtAAATAACCCTTATTTAAAGTTAAAATAGCCCAGA-ATggtagctcatacctataatcccaacactttgggagg---------------ccgaggtcggtggatcacctgaggacaggagtttgagaacagtcaggccaacatggtgaaatcccatctctactaaaaatacaaaattagtcaggcatggtggcatatgcctgtaatcccagctagttgaaaagctgaggcaggagaatcgcctgactctgggaggcagaggttgcagtgagtcaagatttcgccactgtactccagcc---------tggacgacagagcaagactttataaaaaaaTTTAAT---------------TTATGATAAAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279432 550 - 5917169 tttcagagacgatttttgtcacctaagctgaaatgcagtggcacaatcctacagcctcaaactcctacaggctcaaactcctaagctcaaaagattctcccacctcagcctcccgtgtagctgggaccacaggcatgcatcaccatacccagctactttttaaatattttcagagagacagggtctcactgtgttgcccaggctggCAAGTAACCCttatttaaagttaaaatagcccaga-gtggtagctcatacctataatcccaacactttgggagg---------------ctgaggtgggtggatcacctgaggacaggagtttgagaatagccaggccaacatggtgaaaccccaactctactaaaaatacaaaattagccaggcatgatggcacatgcctgtaatcccagctacttgagaggctgaggtgggagaatcgcctgagtct-ggaggcagagattgcagtgagtcgagatttcgccactgcactccagcc---------tggatgacagattgagactctatcaaaaaatttaatttaatttaatttaaattaaGATAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9243496 525 - 10531588 tttcagagacgatttttgtcacctaggccgaaatgcagtggcacaatcctacagcctcaaactcctacaggctcaaactcctaagctcaaaagattctccctcctcagcctcccgtgtagctgggaccacaggcacgcatcaccatacccagctactttttaaatattttcagaaagacagggtctcactgtgttgcccaggctggtAAGTAACCCTTATTTAAAGTTAAAATAgcccaga-gtggtagctcatacctataatcccaacactttgggagc---------------ccaaggtgggtggatcacctgaggacaggagtttgagaacagccaggccaacatggtgaaaccccatctctactaaaaataca------------------ggcacatg--------cccagttacttgagaggctgaggcaggagaattgcctgagtctgggaggcagaggttgcagtgagtcgagatttcgccactgtactccagcc---------tgggtgacagagcgagactctatcaaaaaatttaatttaatttaatttaatttaaGATAAAAA i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 895346 1038 + 1009443 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=503399.000000 s hg38.chr16_GL383557v1_alt 9861 309 + 89672 ACAggccaggcacggtggctcacgtctgtaatcccagcactgtgggaggctgagatgggtggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaaccccatctctactaaatataccaaaattagccaggcgtggtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagatcgtgccactgcaatccagcctgggcgacagagcgagactctgcctcaa----aCatacatacacacatatg------------tac s panTro5.chr16 21435841 309 - 81586097 ACAggccaggcacggtggctcatgtctgtaatcccagcactgtgggaggctgagatgggtggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaaccccatctctactaaatataccaaaattagccaggtgtggtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagatcgtgccactgcaatccagcctgggcgacagagcgagactctgcctcaa----aCatacatacacacatatg------------tac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 735623 309 + 3010529 ACAggccaggcacggtggctcatgtctgtaatcccagcactgtgggaggctgagataggtggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaaccccatctctactaaatataccaaaattagccaggcgtggtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccaagattgtgccactgcaatccagcctgggcgacagagcgagactctgcctcaa----aCATACATACACACATATG------------TAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53843358 313 + 163208435 ACAggccaggcgcggtggctcatgtctgtaataccagcactttgggaggctgaggtgggtggatcacctgaggtcaggagttccagaccagcctagtcaacatggtgaaaccccgtctctactaactataccaatattagccaggcgtggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaaccctggaggtggaggttgcagtgagccaagatcatgccactgcactccagcctgggcgacagagtgagactctgtctcaa----acatacatacatacgtacg--------tacatac i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21493235 316 - 44557958 ACAggccagacacagtggttcatgcctgtaatcccagcactttgggaggctgaggtaggtggatcacctgagatcaggagtttgacaacagcctggctaagacggtgaaactccatctctgctaaatgtaccaaatttacccaggcatggtggcaagcacctgtaatcccagctactcaggaggctgaggcaggcgaattgcttgaacccaaaaggtggaggtttcagtgagcc-----cttgccactgcacttcagcctgggcaacagaatgagactctgtctcaa----acatacatacagacagacagacagacagacaTAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3279982 316 - 5917169 ACAggccaggcacagtggttcatgcctgtaatcccagcactttgggaggctgagataggtggatcacctgagatcaggagtttgacaacagcctggctaacatggtgaaaccccatgtctactaaatacacaaaacttacccaggcatggtggcaagcacctgtaatcccaggtactcagggggctgaggcaggagaatcgcttgaacccaaaaggtggaggtttcagtgagcc-----cttgccactgcacttcagcgtgggcaacagaacgagactctatctcaa----aCATacagacagacagacagacagacagacaTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9244021 320 - 10531588 ACAggccaggcacagtggttcatgcctgtaatcccagcactttgggaggctgaggtaggtggatcacctgaaatcaggagtttgacaacagcctggctaacatggtgaaaccccatctctactaaatatacaaaacttacccaagcatggtggcaagcacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaaaaggtggaggtttcagtgagcc-----cttgccactgcacttcagcctgggcaacagaacgagactccgtctcaaacatacatacatacagacagacagacagacagacaTAA i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 895346 1038 + 1009443 I e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=145242.000000 s hg38.chr16_GL383557v1_alt 10170 68 + 89672 atataaaatatat-----gtttattagagttgtatata---tGTTGAAGCCACAACACACTACAC-AAAAACTCTAA s panTro5.chr16 21436150 68 - 81586097 atataaaatatat-----gtttattagagttgtatata---tGTTGAAGCCACAACACACTATAC-AAAAACTTTAA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 735932 69 + 3010529 ATATAAAATATAC-----GTTTATTAGAGTTGTATATA---TGTTGAAGCCACAACACACTATACAAAAAACTCTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53843671 68 + 163208435 ataTAAAATATAC-----GTTTATTAGAGTTGTATATA---TGTTGAAGCCACAACACAGTATAC-AAAAACTCTAA i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21493551 68 - 44557958 ATGTAAAATATAT-----GTTTATTAGAGTTGTATATG---TGTTGAAGCCACAACACACTACAC-AAAAACTCTAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3280298 68 - 5917169 ATGTAAAATATAT-----GTTTATTAGAGTTGTATATG---TGTTGAAGCCACAACACACTATAC-AAAAACTCTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9244341 68 - 10531588 ATGTAAAATATAT-----GTTTATTAGAGTTGTATATG---TGTTGAAGCCACAACACACTATAC-AAAAACTCTTA i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 896384 76 + 1009443 ATACAAATTACATTAGAAGTTTATTAGGGTTTTACATAATTTACTGAAGCCAAAACACACTGTAC-AAAAACTCTGA i dasNov3.JH569970 I 1038 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=182355.000000 s hg38.chr16_GL383557v1_alt 10238 103 + 89672 AATAAgaccaggtgcagtgggtcacacctataatcctagcactttgggaggctgaggtgggcagatcacttgaggtcaggagttcaaaaccagcctggccaac s panTro5.chr16 21436218 103 - 81586097 AATAAgaccaggcgcagtgggtcacacctgtaatcctagcactttgggaggctgaggtgggcagatcacttgaggtcaggagttcaaaaccagcctggccaac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736001 103 + 3010529 AATAAgaccaggcgcagtgggtcacacctgtaatcctagcactttgggaggctgaggtgggcagatcacttgaggtcaggagttcaaaaccagcctggccaac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53843739 103 + 163208435 AATAAgaccaggcgcagtgggtcacacctgtaatcctagtactttggaaggccgaggtgggcagaacacttgaggtcaggagttcaaaaccagcctggccaac i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21493619 103 - 44557958 AATAAGATGgggtgtggtggctcatacccgtaatcctagcactttgggaggctgaggtgggcggatcacttgaggtcaggagttcaaaaccagcctggtcaac i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3280366 103 - 5917169 AACAAGATGgggcgtggtggctcatacctgtaatcctagcactttgggaagctgaggtgggcggatcacttgaggtcaggagttcaaaaccagcctggtcaac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9244409 103 - 10531588 AATAAGATGgggtgtggtggctcatacctgtaatcctagcactttgggaggctgaggtgggcggatcacttgaggtcaggagttcagaaccagcctggtcaac i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=339731.000000 s hg38.chr16_GL383557v1_alt 10341 323 + 89672 atggtgaaactctgtctatatggaaaaatacaaaatacaaaatacaaaaaaattagccaggcgtggtggtgcacacttgtgatcccagctacttgggaggctgaggcaggagaatcacttgaacctgagagatggaggttgcagtgagccgagatcacaccactgcactccagcctgggcaacagagcgagact--gtctcaaaaaaaata-a--aaaaaaaa------aaaataaaag---------gctgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaag s panTro5.chr16 21436321 326 - 81586097 atggtgaaactctgtctatatggaaaaatacaaaatacaaaatacaaaaaaattagccgggcgtggtggtgcacacttgtgatcccagctacttgggaggctgaggcaggagaatcacttgaacctgagagatggaggttgcagtgagccgagatcacaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaaaata--aaaaaaaa------aaaataaaag---------gctgggcgtggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcacaaggtcaggagttcaagactagcctggccaag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736104 324 + 3010529 atggtgaaactctgtctatatggaaaaatacaaaatacaaaatacaaaaaaattagccaggcgtggtggtgcacacttgtgatcccagctactt-ggaggctgaggcaggagaatcacttgaacctgagagatggaggttgcagtgagccgagatcacaccactgcactccagcctgggcaacagagcgagactctgtctcaaaaaaaata-a--aaaaataa------aaaataaaag---------gctgggcgtggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagttcaggaccagcctggccaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53843842 319 + 163208435 atggtgaaactccgtctatatagaaaaatacaaaatacaaaac-------aattagccaggcgtggtggtgcacacttgtgatcccagctacttgggaggctgaggcaggagaatcacttgaacccgggagatagaggttgcagtgagccaagatcacaccactgcactccagcctggacaacagagcgagactctgtctcaaaaaaaata-aataaaaataa------aaaataaaag---------gctgggtgtggtggctcacggctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagtt-aagaccagactggccaag i nomLeu3.chr2 C 0 C 0 s cebCap1.NW_016107433v1 3280469 324 - 5917169 acggtgaaaccccatctctactaaaatatt----------------aaaaaattagccaggcatggtggtgcgtacctgtaagcccagctagtggggaggctgaggcaggagaatcatttggacctgggaggcagaggttgcagtgagccgaggtcacgccactgcactccagtctgggcgacagattaagactccatctcgaaaaaataa-a--aaataaaaaCCTCtaaaataatagtatttatcagccgggcaccatggctcatgcctataatcccagcactttgggaagctgaggcgggtagatcacaaggtcaggagctccagaccagcctggccagt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9244512 325 - 10531588 acagtgaaaccccatctctactaaaatatc---------------aaaaaaattagccaggcatggtggtgcacgcctataatcccagctagtggggaggctgaggcaggagaatcgtttggacctaggaggcagaagctgcagtgagccgagatcacgccactgcactccagtctgggtgacagatcaaaactccacctcaaaaaaataa-a--aaataaaaaCCTCtaaaataatagtatttatcagctgggcaccatggctcatgcctgtaatcccagcactttgggaagctgaggcgggtggaccacaaggtcaggagttccagaccagcctggccagc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21493722 0 - 44557958 C e otoGar3.GL873566 13662913 1454 + 13852661 I a score=213781.000000 s hg38.chr16_GL383557v1_alt 10664 141 + 89672 atggtgaaactccatctctactaaaaactacaaaaaaa-ttagccgggcatggtggcaggtgcctgtagtcccagctacttggaaggctgaagcaggagaatcacttgaacctggga-gcagaggttgcagtgagtcgagatc s panTro5.chr16 21436647 142 - 81586097 atggtgaaactccatctctactaaaaactacaaaaaaaattagccgggcatggtggcaggtgcctgtagtcccagctacttggaaggctgaagcaggagaatcacttgaacctggga-gcagaggctgcaatgagtcgagatc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736428 141 + 3010529 atggtgaaactccatctctactaaaaactacaaaaaaa-ttagccgggcatggtggcaggtgcctgtagtcccagctacttggaaggctgaagcaggagaatcacttgaacctggga-gcagaggttgcagtgagtcgagatc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53844161 141 + 163208435 atggtgaaattccatctctactaaaaactacaaaaaaa-ttagccgggcatggtggcagatgcctgtagtcccagctactttggaggctaaggcaggagaatcacttgaacctggga-gcagaggctgcagtgagtcgagatc i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21493722 140 - 44557958 atggtgaaactccatctctactaaaa--tatttaaaaa-ttagtcaggcatggtggtgtgtgcctgtaatcccagctagtggggaggctgaggcaggagaattgtttggacctgggaggcagaggttgcagtgagccgagatc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3280793 139 - 5917169 atggtgcaaccccatctctactaaaa---atacaaaaa-ttagccgggcatggtggcacatgcctgcactcccagctactcatgaggctgaggcaggagaattgcttcaaccacggaggcggaggttgcagtgagctgagatc i cebCap1.NW_016107433v1 C 0 I 435 s aotNan1.NW_018500622v1 9244837 139 - 10531588 atggcgcaaccccatctctactaaaa---ataaacaaa-ttagccgggcatggtggcacacgcctgcactcccagctactcaggaggctgaggcaggagaattgcttcaaccagagaggcagaggttgcagtgagctgagatc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=26297.000000 s hg38.chr16_GL383557v1_alt 10805 23 + 89672 atgccaccgcactctagcctggg s panTro5.chr16 21436789 23 - 81586097 atgccactgcactctagcctggg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736569 23 + 3010529 atgccactgcactctagcctggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53844302 23 + 163208435 atgccactgcactccagcctggg i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21493862 23 - 44557958 acgccacagcattctagtctggg i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9244976 23 - 10531588 accccactgctctccagcctggg i aotNan1.NW_018500622v1 C 0 I 6 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=17686.000000 s hg38.chr16_GL383557v1_alt 10828 24 + 89672 caacagagtgaga----gtctcaaaaaa s panTro5.chr16 21436812 28 - 81586097 caacagagtgagactctgtctcaaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736592 28 + 3010529 caacacagtgagactctgtctcaaaaaa i gorGor5.CYUI01000018v1 C 0 I 2 s nomLeu3.chr2 53844325 28 + 163208435 tgacagagtgagactctatctcaaaaaa i nomLeu3.chr2 C 0 I 3 s calJac3.chr20 21493885 28 - 44557958 tgacagatcaagactccgtctcaaaaaa i calJac3.chr20 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e aotNan1.NW_018500622v1 9244999 6 - 10531588 I e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e panPan2.chr16 21502705 1346 - 90481686 M e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=380316.000000 s hg38.chr16_GL383557v1_alt 10852 305 + 89672 aaaaaaaaaa----------aaaaaagaaCTCTAAAATGATAGTA-TTTATCAgctgggcacggtggctcacacctgtaatcccagtactttgggatgctaaggcgggtggaacacaaggtcaggagttccagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcacgcgcctgtactcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggctgcagtgagccaagattatgccactgctctccagcctcagtgacag s panTro5.chr16 21436840 305 - 81586097 aaaaaaaaaa----------aaaaaagaaCTCTAAAATGATAGTA-TTTATCggctgggcacggtggctcacacctataatcccagtactttgggatgctaaggtgggtggaacacaaggtcaggagttccagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcacgcgcctgtactcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggctgcagtgagccaagattatgccactgctctccagcctcagtgacag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504054 305 - 90481686 aaaaaaaaaa----------aaaaaagaaCTCTAAAATGATAGTA-TTTATCggctgggcacggtggctcacacctataatcccagtactttgggatgctaaggtgggtggaacacaaggtcaggagttccagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcacgcgcctgtactcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggctgcagtgagccaagattatgccactgctctccagcctcagtgacag i panPan2.chr16 M 1346 C 0 s gorGor5.CYUI01000018v1 736622 305 + 3010529 aaaaaaaaaa----------aaaaaagaaCTCTAAAATGATAGTA-TTTATCggctgggcacagtggctcacacctgtaatcccagtactttgggatgctaaggcaggtggaacacaaggtcaggagttccagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacgcgcctgtactcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggctgcagtgagccaagattatgccactgctctccagcctcagtgacag i gorGor5.CYUI01000018v1 I 2 C 0 s nomLeu3.chr2 53844356 316 + 163208435 aaaaaaaaaacaaaaaaaacaaaaaaaCACTCTAAAATAATAGTATTTTCTCAgctgggcacagtggctcacgccagtaatcccagtactttgggatgccaaggcgggtggaacacaaggtcaggagttccagaccagcctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggtggcacgcacctgtactcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggctgcagtgagccgagatcatgccactgctctccagcctcagtgacgg i nomLeu3.chr2 I 3 C 0 s calJac3.chr20 21493913 301 - 44557958 ----ataaaa----------aataaaaaCCCCTAAAATAATAGTA-TTTATCAgctgggtaccatggcccatgcctgtaatcccagcactttgggaaactgaggcgggtggatcacaaggtcaggagttccagaccagcctggctagcatggtacaaccccatctctactaaaaatacaaaaattaactgggcatggtggcgcatgcctgcactcccagctactcaggaggctgaggcaggagaattgcttcaaccagggaggtggaggttgcagtgagctgagatcgccccactgctctccaggctgggtgacca i calJac3.chr20 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e aotNan1.NW_018500622v1 9244999 6 - 10531588 I e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=42826.000000 s hg38.chr16_GL383557v1_alt 11157 26 + 89672 agtgagactccatctcaaaaaaaa-aa s panTro5.chr16 21437145 26 - 81586097 agtgagactccatctcaaaaaaaa-aa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504359 26 - 90481686 agtgagactccatctacaaaaaaa-aa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736927 26 + 3010529 agtgagactccatctcaaaaaaaa-aa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53844672 26 + 163208435 agtgagactccatctcaaaaaaaa-aa i nomLeu3.chr2 C 0 I 309 s calJac3.chr20 21494214 26 - 44557958 agtgagagtccatctcaaaaaaaa-aa i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9245005 27 - 10531588 agtgagattccatctcaaaaaaaatta i aotNan1.NW_018500622v1 I 6 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=940.000000 s hg38.chr16_GL383557v1_alt 11183 2 + 89672 at s panTro5.chr16 21437171 1 - 81586097 -t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504385 1 - 90481686 -t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736953 1 + 3010529 -t i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21494240 2 - 44557958 TT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9245032 2 - 10531588 at i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I e nomLeu3.chr2 53844698 309 + 163208435 I a score=3831.000000 s hg38.chr16_GL383557v1_alt 11185 4 + 89672 aaga s panTro5.chr16 21437172 4 - 81586097 aaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504386 4 - 90481686 aaga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736954 4 + 3010529 aaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845007 4 + 163208435 aaga i nomLeu3.chr2 I 309 C 0 s calJac3.chr20 21494242 1 - 44557958 ---A i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9245034 1 - 10531588 ---a i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13662913 1454 + 13852661 I a score=2098.000000 s hg38.chr16_GL383557v1_alt 11189 2 + 89672 ag s panTro5.chr16 21437176 2 - 81586097 ag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504390 2 - 90481686 ag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736958 2 + 3010529 ag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845011 2 + 163208435 aG i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494243 2 - 44557958 AT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9245035 2 - 10531588 at i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13664367 2 + 13852661 AA i otoGar3.GL873566 I 1454 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e dasNov3.JH569970 896460 0 + 1009443 C e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=114981.000000 s hg38.chr16_GL383557v1_alt 11191 57 + 89672 aaTAACAGTATTTATCATAGTACAGACTATT----------AGAATGAAAAATTTTTTCAAAGTATA s panTro5.chr16 21437178 57 - 81586097 aaTAACAGTATTTATCATAGTACAGACTATC----------AGAATGAAAAATTTTTTCAAAGTATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504392 57 - 90481686 aaTAACAGTATTTATCATAGTACAGACTATC----------AGAATGAAAAATTTTTTCAAAGTATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 736960 57 + 3010529 aaTAACAGTATTTATCATAGTACAGACTATT----------AGAATGAAAATTTTTTTCAAAGTATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845013 57 + 163208435 AAGAATAGTATTTATCATAGTACAGACTATT----------AGAATGAAAATTTTTTTCAAAGTATG i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494245 55 - 44557958 AATAATAGTATTTCTCATAGTATAGCCTATT----------AGAATGA--ATTTTTTTTTAAGTATG i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9245037 53 - 10531588 aataataGCATTTCTCATAGTACAGCCTATT----------AGAATAA----TTTTTTTAAAGTATA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13664369 49 + 13852661 AATAGTAGTATTTCTCATACTATAGCCTGAT----------AAAATGAAGA--------AAAATACT i otoGar3.GL873566 C 0 I 3 s dasNov3.JH569970 896460 60 + 1009443 AATAACAGCATTTCTCATAGTACAGCCTATTCAGTTGAAGGAGAAAGAAAAG-------AAAGTATA i dasNov3.JH569970 C 0 I 4 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2911649 765 + 9850184 I e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=21667.000000 s hg38.chr16_GL383557v1_alt 11248 9 + 89672 TA----AGAACAT s panTro5.chr16 21437235 9 - 81586097 CA----AGAACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504449 9 - 90481686 TA----AGAACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737017 9 + 3010529 TA----AGAACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845070 13 + 163208435 TAAGTCAGAACAT i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494300 13 - 44557958 TAAGTAAGAACAT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9245090 13 - 10531588 TAAGTAAGAACAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2912414 9 + 9850184 TA----AGAACAT i proCoq1.NW_012152729v1 I 765 C 0 s otoGar3.GL873566 13664421 8 + 13852661 TA----AG-ACAT i otoGar3.GL873566 I 3 C 0 s dasNov3.JH569970 896524 9 + 1009443 TA----AGAACAT i dasNov3.JH569970 I 4 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e cebCap1.NW_016107433v1 3280932 435 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=58186.000000 s hg38.chr16_GL383557v1_alt 11257 14 + 89672 AAAGAAAAGTGGGT s panTro5.chr16 21437244 14 - 81586097 AAAGAAAAGTGGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504458 14 - 90481686 AAAGAAAAGTGGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737026 14 + 3010529 AAAGAAAAGTGGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845083 14 + 163208435 ACAGAAAAGTGGGT i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494313 14 - 44557958 AAATAAAAGTGAGT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281367 14 - 5917169 aaaaaaaaGTGAGT i cebCap1.NW_016107433v1 I 435 C 0 s aotNan1.NW_018500622v1 9245103 14 - 10531588 AAATAAAAGTGAGT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2912423 14 + 9850184 AAAGGAAAGTGGGT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13664429 14 + 13852661 AAAGGAAAATGGGT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 896533 14 + 1009443 AAAGGAAAGTGGGT i dasNov3.JH569970 C 0 I 108 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=281385.000000 s hg38.chr16_GL383557v1_alt 11271 81 + 89672 GTGAAATT--------CTCATAGTAGTGGACAATTATCAACCCACTGAGTAAGCATTTTCTGAAGAAACCTATCACAGGCAAAATACT-G s panTro5.chr16 21437258 81 - 81586097 GTGAAATT--------CTCATAGTAGTGGACAATTATCAACCCACTGAGTAAGCATTTTCTGAAGAAACCTATCATAGGCAAAATACT-G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504472 81 - 90481686 GTGAAATT--------CTCATAGTAGTGGACAATTATCAACCCACTGAGTAAGCATTTTCTGAAGAAACCTATCATAGGCAAAATACT-G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737040 81 + 3010529 GTGAAATT--------CTCATAGTAGTGGACAATTATCAACCCACTGAGTAAGCATTTTCTGAAGAAACCTATCATAGGCAAAATACT-G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845097 81 + 163208435 GTGAAGAT--------CTCATGATAGTGGACAATTATCAACCCACTGAGTAAGCATTTTCTGAAGAAACCTATCATAGGCAAAATACT-G i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494327 82 - 44557958 GTGAAGAT--------TTCACGGTAGTGGACAATTATCAACCcattgaataagccttttctgaatgaatctatcataggcaaaatactgg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281381 82 - 5917169 GTGAAGAT--------TTCATGGTAGTGGACAATTATCAACAcattgaataagcattttctgaactaatctatcataggcaaaatactgg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245117 82 - 10531588 GTGAAGAT--------TTCATGGTAGTGGACAATTATCAACCcattgactaagcattttctgaacaaatctatcataggcaaaatactgg i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2912437 81 + 9850184 GTGATGAT--------CCCATGGTAGTGGACAGTTACTGTCCcactgaataagcatttactgatcaaatctatcataggcaaaatgct-g i proCoq1.NW_012152729v1 C 0 I 392 s otoGar3.GL873566 13664443 72 + 13852661 GTGAAGAT--------CTTATGG-------CAGTTACTGTCCCACTGAATAAGCATTTACTAATCAAATCTATC--AGATAAAATACT-G i otoGar3.GL873566 C 0 I 13 s dasNov3.JH569970 896655 89 + 1009443 GTAAAATTTAGAACAGCCCATGGTGTTGGACAGTTATGTTAtcattgaacaagcatttactgatccaacctattgtaggcaaaataca-g i dasNov3.JH569970 I 108 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=27.000000 s hg38.chr16_GL383557v1_alt 11352 1 + 89672 A s panTro5.chr16 21437339 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504553 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737121 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845178 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494409 1 - 44557958 g i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281463 1 - 5917169 g i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245199 1 - 10531588 g i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13664528 1 + 13852661 T i otoGar3.GL873566 I 13 C 0 s dasNov3.JH569970 896744 1 + 1009443 a i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80427493 734 + 88915250 I e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=78484.000000 s hg38.chr16_GL383557v1_alt 11353 29 + 89672 -----------GAATAAAACAC-ATTCCATGTGTTTTATTC s panTro5.chr16 21437340 29 - 81586097 -----------GAATAAAACAC-ATTCCATGTGTTTTATTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504554 29 - 90481686 -----------GAATAAAACAC-ATTCCATGTGTTTTATTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737122 29 + 3010529 -----------GAATAAAACAC-ATTCCATGTGTTTTATTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845179 24 + 163208435 -----------GAATAAAACAC-ATTCTATGTT-----TTC i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494410 24 - 44557958 -----------gaataaaacac-attccatgtt-----ttc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281464 24 - 5917169 -----------gaataaaacac-attccatgtt-----ttc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245200 24 - 10531588 -----------gaataaaacac-attccatgtt-----ttc i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13664529 29 + 13852661 -----------GAATAAAACAC-ATTCTATATATTAttttc i otoGar3.GL873566 C 0 I 1320 s canFam3.chr5 80428227 21 + 88915250 -----------GAATAGAACAC-ATTCCATGTC-------- i canFam3.chr5 I 734 C 0 s dasNov3.JH569970 896745 36 + 1009443 gaataaaagatggataaaacacaatcccctatc-----ttc i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=299858.000000 s hg38.chr16_GL383557v1_alt 11382 135 + 89672 AAGAAGC-CAATATATAACAGAGGACACAC--ATGAAATCACCCCTTTTACTACCAATTTAACATGCAATATGTGCCAAAA--AGAG---GTAAGTGCTTTGCTTTAATGTGTATAATTAATGAAATGtgtataatttcattt s panTro5.chr16 21437369 135 - 81586097 GAGAAGC-CAATATATAACAGAGGACACAC--ATGAAATCACCCCTTTTACTACCAATTTAACATGCAATATGTGCCAAAA--AGAG---GTAAGTGCTTTGCTTTAATGTGTATAATTAATGAAATGtgtataatttcattt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504583 135 - 90481686 GAGAAGC-CAATATATAACAGAGGACACAC--ATGAAATCATCCCTTTTACTACCAATTTAACATGCAATATGTGCCAAAA--AGAG---GTAAGTGCTTTGCTTTAATGTGTATAATTAATGAAATGtgtataatttcattt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737151 135 + 3010529 AAGAAGC-CAATATATAACAGAGGACACAC--ATGAAATCACCCCTTCTACTACCAATTTAACATGCAATATGTGCCAAAA--AGAG---GTAAGTGCTTTGCTTTAATGTATATAATTAATGAAATGtgtataatttcattt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845203 116 + 163208435 AAGAAGC-CA--ATATAAAAGAGGACACAC--ATGAAATCACCCCTTCCTctaccaatttaacatgcaatatatgccaaaaacagag---gtaagtgctttgcttt-------------------atgtgtataatttcactt i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494434 119 - 44557958 aataagc-caatatataacagaggacacacatatgaaatcaCCCCTTCCACTACCCATTTAAC--ACAAAATGTACCCAAA--ACAGACATtaagtgctttgtttg-------------------atgtgtataatttcattt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281488 120 - 5917169 aagaagc-caatatataacagaggacacacatatgaaatcaCCCCTTCCACTAACCATTTAACATACAAAatgtaccaaaa--acagac-ttaagtgctttgtttt-------------------atgtgtaaaatttcattt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245224 121 - 10531588 aagaagc-caatatataacagaggacacacatatgaaatcaCCCCTTCCACTACCCATTTAACATACAAAATGTACCAAAA--Acagacattaagtgctttgtttt-------------------atgtgtgtaatttcattt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80428248 104 + 88915250 AAGAAACTCAAAATATA----AAGATACAAATATGTAGTCACCATCCTCACTACTCATTT--CATGTTGCgtgtgccaaaa--ag-----tta-------tgtttt-------------------atgtgtataatttcatat i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 896781 118 + 1009443 aggaaactcaatatataacaga-gacacacatatgaaatcacaatctccattactcatttaatggtcgttgtgtgcaaaac--agag---ttaagtgctttgcttt-------------------atgtgtataatttcattt i dasNov3.JH569970 C 0 I 419 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13664558 1320 + 13852661 I a score=3276.000000 s hg38.chr16_GL383557v1_alt 11517 1 + 89672 a s panTro5.chr16 21437504 1 - 81586097 a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504718 1 - 90481686 a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737286 1 + 3010529 a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845319 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494553 1 - 44557958 a i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281608 1 - 5917169 a i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245345 1 - 10531588 a i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80428352 1 + 88915250 a i canFam3.chr5 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 896899 419 + 1009443 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13664558 1320 + 13852661 I a score=283877.000000 s hg38.chr16_GL383557v1_alt 11518 108 + 89672 atctcacaataaccttataaaatgggcacgttattactcccattttacatataaa-------------------------------------------------------------------------------gaaac-tgaggtcttaatgatt-------aaaaaaagactt--gccactgt---cactctgccatt s panTro5.chr16 21437505 108 - 81586097 atctcacaataaccttataaaatgggcacgtttttactcccattttacatataaa-------------------------------------------------------------------------------gaaac-tgaggtcttaatgatt-------aaaaaaagactt--gccactgt---cactctgccatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504719 108 - 90481686 atctcacaataaccttataaaatgggcacgtttttactcccattttacatataaa-------------------------------------------------------------------------------gaaac-tgaggtcttaatgatt-------aaaaaaagactt--gccactgt---cactctgccatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737287 108 + 3010529 atctcacaataaccttataaaatgggcacattattactcccatttcacatatgaa-------------------------------------------------------------------------------gaaac-tgaggtcttaatgatt-------aaaaaaagactt--gccactgt---cactctgccatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845320 108 + 163208435 atctcacaataaccttataaaatgggcacattattactcccattttacatatgaa-------------------------------------------------------------------------------gaaac-taaggtcttaatgatt-------aaaaaaagactt--gccactgt---cactctgccatt i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494554 188 - 44557958 atttcacaataaccttatgagatgggcgcattattactctcattttacatatgaagaaacAGGTCTTTTTTTTTTTTCTTCTTCCAATTGGGTGAGGTTCCATGGTCCCAGGGAAAGGGGCCAGGGAAGTCGCTGAAAC-TGAGGTCTTAATGATT------AAAAAAAAGACTT--GCCACTGT---CACTCTGCCATT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281609 110 - 5917169 atctcacaataaccttatcagatgggcacattattactctcattttacatacgaa-------------------------------------------------------------------------------gaaac-tgaggtcttaatgatt-----aaaaaaaaaggctt--gccactgt---cactctgccatt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245346 111 - 10531588 atctcacaataaccttatgagatgggcacattattactcttattttacatatgaa-------------------------------------------------------------------------------gaaac-tgaggtcttaatgatt----aaaaaaaaaagactt--gccactgt---cactctgccatt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80428353 102 + 88915250 atctcataac-accctatgagataggtaca---ttacttccattctacaagtg---------------------------------------------------------------------------------gaaac-caaggtcttagagaaggtaaAAAACAAAAAAACTT--GCCAAT----------TGCCATT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897318 107 + 1009443 acctcacaagaactttatgagataggt--gtcattactccagctttacagatgag-------------------------------------------------------------------------------gatacttgagatcttag------------aaaaaaaatcttaagtcactATTTGTACTGTGCCATT i dasNov3.JH569970 I 419 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13664558 1320 + 13852661 I a score=337071.000000 s hg38.chr16_GL383557v1_alt 11626 94 + 89672 aaatagcaaagatgg-----aaAGATCAAGCATGTAACC---ATTACTATACTCTACTAATGAATAAATAATTATGACTCAGTATATTAAGCACTATTATAG s panTro5.chr16 21437613 94 - 81586097 aaatagcaaagatgg-----aaAGATCAAGCATGTAACC---ATTACTATACTCTACTAATGAATAAATAATTACGACTCAGTATATTAAGCACTACTATAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504827 94 - 90481686 aaatagcaaagatgg-----aaAGATCAAGCATGTAACC---ATTACTATACTCTACTAATGAATAAATAATTACGACTCAGTATATTAAGCACTACTATAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737395 94 + 3010529 aaatagcaaagatgg-----aaAGATCAAGCATGTAACC---ATTACTATACTCTACTAATGAATAAATAATTACGACTCAGTATATTAAGCACTATTATAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845428 95 + 163208435 aaatagcaaagATGT-----AAAGATCAAGCATGTAACCA--ACTACTATATTCTACTAATGAATAAATAATTACAACTTAGTATATTAAGCACTATTATAG i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494742 90 - 44557958 AAATAGCAAAGATGT-----GAAGATCAAGCATGTAACC---ACTACTATACTCTACTAATG----AATAATTACAACTCAGTATATTAAGCACTATTCTAG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281719 90 - 5917169 aaatagtaaagatgt-----gaAGATCAAGCGTGTAACC---ACTACTATACTCTACTAATG----AATAATTACAACTCAGTATATTAAGCACTATTCTAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245457 85 - 10531588 aaatagcgaagATGT-----GAAGATCAAGCATGTAACC---ACTACTA-----TACTAATG----AATAATTACAACTCAGTATATTAAGCACTATTCTAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13665878 94 + 13852661 AAAAAAAAAAGAAAG-----AAAGACCCAGCATGCAACC---ATTACTATATTGTACCAATGAACAAATAATTATAACTCAGTATATTGAGCACTGTTATAG i otoGar3.GL873566 I 1320 C 0 s canFam3.chr5 80428455 87 + 88915250 AAATAGCAAAGATGGAAAGAAAAGATCAAGCACGTAACCAGTACTCCTATATCTTACCAATGAACAAATAATTA---------------AGGACTATTATAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897425 94 + 1009443 AAATAGCAAAGATGG-----AAAGAGCATGCATGTAACC---ACTACCATATTTCACTAATCAACAAGTAACTGCAACTCAGTATATTAAGCATTATTATAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=36847.000000 s hg38.chr16_GL383557v1_alt 11720 13 + 89672 AAAT-ACATACAAA s panTro5.chr16 21437707 13 - 81586097 AAAT-ACATACAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504921 13 - 90481686 AAAT-ACATACAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737489 13 + 3010529 AAAT-ACATACAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845523 13 + 163208435 AAAT-ACATACAAA i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494832 13 - 44557958 AAAT-ATATACAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281809 13 - 5917169 AAAT-ATATACAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245542 13 - 10531588 AAAT-ATATACAAA i aotNan1.NW_018500622v1 C 0 I 25 s otoGar3.GL873566 13665972 9 + 13852661 AAAT-ATAAA---- i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 897519 14 + 1009443 AAATAATATACAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=40922.000000 s hg38.chr16_GL383557v1_alt 11733 16 + 89672 -----ATATACAAAGTAAAAA s panTro5.chr16 21437720 16 - 81586097 -----ATATACAAAGTAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504934 15 - 90481686 -----ATATACAAAGT-AAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737502 16 + 3010529 -----ATATACAAAGTAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845536 16 + 163208435 -----ATATACAAAGGAAAAA i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494845 16 - 44557958 -----ATATACAAAGCAAAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281822 16 - 5917169 -----ATATACAAAGTAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13665981 16 + 13852661 -----TTATACAATGTAAAAA i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 897533 21 + 1009443 ATGTAGTATACAAAGTAAAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=6670.000000 s hg38.chr16_GL383557v1_alt 11749 4 + 89672 AATA s panTro5.chr16 21437736 4 - 81586097 AATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504949 4 - 90481686 AATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737518 4 + 3010529 AATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845552 4 + 163208435 AATA i nomLeu3.chr2 C 0 C 0 s cebCap1.NW_016107433v1 3281838 4 - 5917169 ACTA i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13665997 4 + 13852661 AGTA i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 897554 4 + 1009443 GGTA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C a score=5922.000000 s hg38.chr16_GL383557v1_alt 11753 3 + 89672 ACA s panTro5.chr16 21437740 3 - 81586097 ACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504953 3 - 90481686 ACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737522 3 + 3010529 ACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845556 3 + 163208435 ACA i nomLeu3.chr2 C 0 C 0 s cebCap1.NW_016107433v1 3281842 3 - 5917169 ACA i cebCap1.NW_016107433v1 C 0 I 8 s dasNov3.JH569970 897558 3 + 1009443 ACA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=443.000000 s hg38.chr16_GL383557v1_alt 11756 1 + 89672 T s panTro5.chr16 21437743 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504956 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737525 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845559 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s dasNov3.JH569970 897561 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=24383.000000 s hg38.chr16_GL383557v1_alt 11757 27 + 89672 Aggctgggcaaggtggctcacgcctgt s panTro5.chr16 21437744 27 - 81586097 Aggctaggcaaggtggctcacgcctgt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504957 27 - 90481686 Aggctaggcaaggtggctcacgcctgt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737526 27 + 3010529 Aggccgggcaaggtggctcacgcctgt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845560 27 + 163208435 Aggctgggcaaggtggctcatgcctgt i nomLeu3.chr2 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e macFas5.chr20 21033306 0 - 78541002 C e colAng1.NW_012123265v1 480671 0 + 3907144 C e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=176086.000000 s hg38.chr16_GL383557v1_alt 11784 127 + 89672 aat-cccagcactttgggaggccgaggcgggcagatcacctgaggttgggagttcaaaaccagcctgatcaacatggagaaatcctatctctaca--aaaatac---aaaattagccaggtgtggtagtgcat s panTro5.chr16 21437771 127 - 81586097 aat-cccagcactttgggaggccgaggcgggcagatcacctgaggttgggagttcgaaaccagcctgaccaacatggagaaatcctatctctaca--aaaatac---aaaattagccaagcgtggtagtgcat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21504984 127 - 90481686 aat-cccagcactttgggaggccgaggcgggcagatcacctgaggttgggagttcgaaaccagcctgaccaacatggagaaatcctatctctaca--aaaatac---aaaattagccaagcgtggtagtgcat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737553 127 + 3010529 aat-cccagcactttgggaggccgaggcgggcagatcacctgaggttgggagttcgaaaccagcctgaccaacatggagaaaccctatctctaca--aaaatac---aaaattagccaggcgtggtagtacat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845587 119 + 163208435 aatccccagcactttgg--ggccgaggagggtggatcacctgaggttgggagttcgagaccagcctgaccaacatggagaaatcccatctctaca--aaaatac---agaattg-------gtggtggtgcac i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21033306 130 - 78541002 aat-cccagcactttggcaggctgaggcaggtggatcac--gtggtcaggagttcaagaccagcttggtcaagatggtgaaactccgtttctactaaaaactacaaaaaaattagctgggcgcggtggcaggc i macFas5.chr20 C 0 C 0 s colAng1.NW_012123265v1 480671 128 + 3907144 aat-cccagcactttgggaggctgaggcaggtggatcac--gaggtcaggagttcaagaccagcttggtcaagatggtgaaactccgtctctact--aaactacaaaaaaattagctgggagcggtggcaggc i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e rheMac8.chr20 21324008 127 - 74971481 I e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e chlSab2.chr5 58190669 127 + 75399963 I e cerAty1.NW_011999143v1 20754049 127 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=483223.000000 s hg38.chr16_GL383557v1_alt 11911 142 + 89672 gcct-------gtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcgtgccattgcactccagccagggcaacaagagtgaaactccgtctcaaaaagaaaaataa s panTro5.chr16 21437898 142 - 81586097 gcct-------gtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcgtgccattgcactccagccagggcaacaagagtgaaactccgtctcaaaaagaaaaataa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505111 142 - 90481686 gcct-------gtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcggtgagccaagatcgtgccattgcactccagccagggcaacaagagtgaaactccgtctcaaaaagaaaaataa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737680 142 + 3010529 gcct-------gtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcgtgccattgcactccagccaaggcaacaagactgaaactccgtctcaaaaagaaaaataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845706 149 + 163208435 gcccaccaccagtaatcccagctactcaggaggctgtggcaggagaatcgcttgaacccgggaaggggaggttgtggtgagccaagatcgtgccattgcactccagccagggcaacaagagtgaaattccatctcaaaaggaaaaataa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324135 140 - 74971481 gcct-------gtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggg-ggcagaggttgcagtgagttgagatcatgccactgcactccagcatgggcgac-agagtgagactctgtcccaaaaaaaaaaaaaa i rheMac8.chr20 I 127 I 23 s macFas5.chr20 21033436 140 - 78541002 gcct-------gtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggg-ggcagaggttgcagtgagttgagatcatgccactgcactccagcatgggcgac-agagtgagactctgtcccaaaaaaaaaaaaaa i macFas5.chr20 C 0 I 23 s cerAty1.NW_011999143v1 20754176 140 + 43916225 gcct-------gtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggg-ggcagaggttgcagtgagttgagatcgtgccactgcactccagcatgggcgac-agagtgagactctgtcccaaaaaaaaaaaaaa i cerAty1.NW_011999143v1 I 127 I 26 s chlSab2.chr5 58190796 140 + 75399963 gcct-------gtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctggg-ggccgagtttgcagtgagttgagatcgtgccactgcactccagcatgggtgac-agagtgagactctgtcccaaaaaaaaaaaaaa i chlSab2.chr5 I 127 I 24 s colAng1.NW_012123265v1 480799 140 + 3907144 gcct-------gtaatcccagttacttgggaggctgaggcaggagaatcacttgaacctggg-cgcagaggttgcagtgagttgagatcgtgccactgcactccaggatgggcgac-agagtgagactctgtctcaaaaataaaaaaaC i colAng1.NW_012123265v1 C 0 I 20 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e macNem1.NW_012011355v1 14426728 297 + 26466322 I e manLeu1.NW_012101698v1 6739916 299 - 7209941 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=1447192.000000 s hg38.chr16_GL383557v1_alt 12053 278 + 89672 aggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtgg-atcatgaagtcaagagatcgagaccatcctggccaacatggtgaaaacttgtctctact-aaaaatacaaaaatcagctgggcctggtggtacacgccggtagtcccagctgcttgggaagctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagctgagatcacgccactgcagtccagcctggtgacagagaga--ctctgtctc s panTro5.chr16 21438040 280 - 81586097 aggctgggcgcggtggctcacgcctgtaatcccaggactttgggaggccgaggcgggtgg-atcatgaagtcaagagatcgagaccatcctggccaacatggtgaaaacttgtctctact-aaaaatacaaaaatcagctgggcctggtggtgcacgcctgtagtcccagctgcttgggaagctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagctgagatcacgccactgcagtccagcctggtgacagagagagactctgtctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505253 280 - 90481686 aggctgggcgcggtggctcacgcctgtaatcccaggactttgggaggccgaggcgggtgg-atcatgaagtcaagagatcgagaccatcctggccaacatggtgaaaacttgtctctact-aaaaatacaaaaatcagctgggcctggtggtgcacgcctgtagttccagctgcttgggaagctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagctgagatcacgccactgcagtccagcctggtgacagagagagactctgtctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 737822 280 + 3010529 aggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtgg-atcatgaagtcaagagatcgagaccatcctggccaacatggtgaaaacttgtctctact-aaaaatacaaaaatcagctgggcctggtggtgcacgcctgtagtcccagctgcttgggaagctgagtcaggagaatcacttgaacccgggaggcagacgttgcagtgagctgagatcacgccactgcactccagcctggtgacagagagagactctgtctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53845855 281 + 163208435 aggctgggtgcagtggttcacacctataatcccagcactttgggaggccaaggcgagtggaatcacaaagtcaagagatcgagaccatcctagccaacacggtaaaaacccatctctact-aaaaatacaaaaatcagctaggcctggtggtgcacgcctgtagtcccagctgcttgggaagctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctgagatcacaccactgcgctccagcctggcgacagagcgagactctgtctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324298 279 - 74971481 Aggctgggcacagtagctcacgcctgtaatcccagtactttgggatgccaaggcggatgg-aacac-aggtcaggagttccagatcagtctggccagcatggtgaaaccccatctccact-aaaaatacaaaaattagctgggcatggtggcacgcgcctatactcccagctacttggaaggctgaggcaggagaatcacttgaacctgggaggcagaggctgcagtgagccaagatcacaccactgcactccagcctggcgacagggtgagactctgtctc i rheMac8.chr20 I 23 C 0 s macFas5.chr20 21033599 279 - 78541002 Aggctgggcacagtagctcacgcctgtaatcccagtactttgggatgccaaggcggatgg-aacac-aggtcaggagttccagatcagtctggccagcatggtgaaaccccatctccact-aaaaatacaaaaattagctgggcatggtggcacgcgcctatactcccagctacttggaaggctgaggcaggagaatcacttgaacctgggaggcagaggctgcagtgagccaagatcacaccactgcactccagcctggcgacagggtgagactctgtctc i macFas5.chr20 I 23 C 0 s macNem1.NW_012011355v1 14427025 279 + 26466322 Aggctgggcacagtagctcacgcctgtaatcccagtactttgggatgccaaggcggatgg-aacac-aggtcaggagtcccagatcagtctggccagcatggtgaaacccaatctccact-aaaaatacaaaaattagctgggcgtggtggcacgcgcctatactcccagctacttggaaggctgaggcaggagaatcacttgaacctgggaggcagaggctgcagtgagccaagatcacaccactgcactccagcctggcgacagggtgagactctgtctc i macNem1.NW_012011355v1 I 297 C 0 s cerAty1.NW_011999143v1 20754342 280 + 43916225 Aggctgggcacagtagctcacgcctgtaatcccagtactttgggatgccaaggcggatgg-aacac-aggtcaggagttccagatcagtctggccagcatggtgaaaccccatctccactaaaaaatacaaaaattagctgggcgtggtggcacgcgcctatactcccagctacttggaaggctgaggcaggagaatcacttgaacctgggaggcagaggctgcagtgagccaagatcacaccactgcactccagcctggtgacagagtgagactctgtctc i cerAty1.NW_011999143v1 I 26 C 0 s chlSab2.chr5 58190960 279 + 75399963 Aggctgggcacggtagctcacgcctgtaatcccagtactttgagatgccaaggcagatgg-aacac-aggtcaggagttccagatcagtctggccagcatggtgaaaccccatctccact-aaaaatacaaaaattagctgggcgtggtggcacgcgcctatactcccagctacttggaaggctgaggcaggagaatcacttgaacctgggaggcagaggctgcagtgagccaagatcacaccactgcgctccagcctggcgacagagtgagactctgtctc i chlSab2.chr5 I 24 C 0 s manLeu1.NW_012101698v1 6740215 279 - 7209941 Aggctgggcacagtagctcacgcctgtaatcccagtactttgggatgccaaggcggatgg-aacac-aggtcaggagttccagatcagtctggccagcatggtgaaaccccatctccact-aaaaatacaaaaattggctgggcgtggtggcacgcgcctatactcccagctacttggaaggctgaggcaggagaatcacttgaacctgggaggcagagactgcagtgagccaagatcacaccactgcactccagcctggcgacagagtaagactctgtctc i manLeu1.NW_012101698v1 I 299 C 0 s colAng1.NW_012123265v1 480959 279 + 3907144 Aggctgggcacggtagctcacacctgtaatcccagtactttgggaggctgaggcaggtgg-atcacgaggtcaggagttcaagaccagcttggtcaagatggtgaaactccgtctctac--aaaaatacaaaaatttgctgggcatgatggtgggtgcctgtaatcccagcactttgggaggctgaggcaggagaatcacttgaacctgggaggcagaggctgcggtgagccaagatcacaccactgcactccagcctggcgacagagtgagactctgtctc i colAng1.NW_012123265v1 I 20 C 0 e canFam3.chr5 80428542 0 + 88915250 C e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=95065.000000 s hg38.chr16_GL383557v1_alt 12331 30 + 89672 aa------------aaataaataaa----------taaataaataaa---------taaat s panTro5.chr16 21438320 23 - 81586097 aa------------aaataaataaa----------taaataaaTA---------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505533 23 - 90481686 aa------------aaataaataaa----------taaataaaTA---------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738102 23 + 3010529 aa------------aaataaataaa----------taaataaaTA---------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846136 39 + 163208435 aa------------aaataaataaa----------taaataaaTTAATTAATTAATTAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324577 27 - 74971481 aa--------aaataaataaataaa----------taaataaata---------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033878 27 - 78541002 aa--------aaataaataaataaa----------taaataaata---------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427304 23 + 26466322 aa------------aaataaataaa----------taaataaaTA---------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754622 23 + 43916225 aa------------aaataaataaa----------taaataaaTA---------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191239 23 + 75399963 aa------------aaataaataaa----------TCAATAAATA---------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740494 23 - 7209941 aa------------aaataaataaa----------taaataaaTA---------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481238 35 + 3907144 aaaaataaataaataaataaataaa----------taaataaata---------------- i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80428542 31 + 88915250 AA------------ACATATATAAAATGTACAAAGTAAGAAAA------------------ i canFam3.chr5 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21494861 0 - 44557958 C e otoGar3.GL873566 13666001 0 + 13852661 C a score=-3478.000000 s hg38.chr16_GL383557v1_alt 12361 4 + 89672 -aCAA s panTro5.chr16 21438343 3 - 81586097 --CAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505556 3 - 90481686 --CAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738125 3 + 3010529 --CAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846175 4 + 163208435 -ACAG i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21494861 4 - 44557958 -ACTA i calJac3.chr20 C 0 C 0 s canFam3.chr5 80428573 4 + 88915250 CATA- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e macNem1.NW_012011355v1 14427327 0 + 26466322 C e rheMac8.chr20 21324604 0 - 74971481 C e macFas5.chr20 21033905 0 - 78541002 C e colAng1.NW_012123265v1 481273 0 + 3907144 C e manLeu1.NW_012101698v1 6740517 0 - 7209941 C e chlSab2.chr5 58191262 0 + 75399963 C e cerAty1.NW_011999143v1 20754645 0 + 43916225 C e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13666001 0 + 13852661 C a score=32712.000000 s hg38.chr16_GL383557v1_alt 12365 4 + 89672 ACAC s panTro5.chr16 21438346 4 - 81586097 ACAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505559 4 - 90481686 ACAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738128 4 + 3010529 ACAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846179 4 + 163208435 ACAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324604 4 - 74971481 aCAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033905 4 - 78541002 aCAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427327 4 + 26466322 ACAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754645 4 + 43916225 ACAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191262 4 + 75399963 ACAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740517 4 - 7209941 ACAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481273 4 + 3907144 aCAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21494865 4 - 44557958 ACAC i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13666001 4 + 13852661 ACTC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80428577 4 + 88915250 ACTT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e dasNov3.JH569970 897562 0 + 1009443 C e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=46254.000000 s hg38.chr16_GL383557v1_alt 12369 7 + 89672 AAAGGCA s panTro5.chr16 21438350 7 - 81586097 AAAGGCG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505563 7 - 90481686 AAAGGCG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738132 7 + 3010529 AAAGGCG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846183 7 + 163208435 AAAGGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324608 7 - 74971481 AAAGGAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033909 7 - 78541002 AAAGGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427331 7 + 26466322 AAAGGAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754649 7 + 43916225 AAAGGAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191266 7 + 75399963 AAAGGAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740521 7 - 7209941 AAAGAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481277 7 + 3907144 AAAGGAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21494869 7 - 44557958 AAAGCAG i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13666005 7 + 13852661 AAAAGAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80428581 7 + 88915250 GAAAGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897562 6 + 1009443 AAAGAA- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e proCoq1.NW_012152729v1 2912518 392 + 9850184 I e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e cebCap1.NW_016107433v1 3281845 8 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=40322.000000 s hg38.chr16_GL383557v1_alt 12376 3 + 89672 TGC s panTro5.chr16 21438357 3 - 81586097 TGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505570 3 - 90481686 TGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738139 3 + 3010529 TGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846190 3 + 163208435 TGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324615 3 - 74971481 TGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033916 3 - 78541002 TGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427338 3 + 26466322 TGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754656 3 + 43916225 TGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191273 3 + 75399963 TGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740528 3 - 7209941 TGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481284 3 + 3907144 TGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21494876 3 - 44557958 TGC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281853 3 - 5917169 TGC i cebCap1.NW_016107433v1 I 8 C 0 s proCoq1.NW_012152729v1 2912910 3 + 9850184 tgc i proCoq1.NW_012152729v1 I 392 C 0 s otoGar3.GL873566 13666012 3 + 13852661 TGT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80428588 3 + 88915250 TGC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897568 3 + 1009443 TGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e aotNan1.NW_018500622v1 9245555 25 - 10531588 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=1546322.000000 s hg38.chr16_GL383557v1_alt 12379 129 + 89672 TCAACTTTGAAGTGG---GGGTGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACATAGGACACCTTGATCATTAAAAGACAAGTAGAAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTAGTG s panTro5.chr16 21438360 129 - 81586097 TCAACTTTGAAGTGG---GGGTGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACATAGGACACCTTGATCATTAAAAGACAAGTAGAAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTAGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505573 129 - 90481686 TCAACTTTGAAGTGG---GGGTGGTAAGGTGGAGTC-AGTCAGGAAAGGTTTCACATAGGACACCTTGATCATTAAAAGACAAGTAGAAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTAGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738142 129 + 3010529 TCAACTTTGAAGTGG---GGGCGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACATAGGACACCTTGATCATTAAAAGACAAGTAGAAGAGTCCC--AGGAAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846193 129 + 163208435 TCAACTTTGAAGTGG---GGGTGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACATAGGACACTTTGATCATTAAAAGACAAGTAGAAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324618 129 - 74971481 TCAACTTTGAAGTGG---GGACGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACGTAGGACACCTCGATCATTAAAAGACAAGTAAGAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21033919 129 - 78541002 TCAACTTTGAAGTGG---GGACGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACGTAGGACACCTCGATCATTAAAAGACAAGTAAGAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427341 129 + 26466322 TCAACTTTGAAGTGG---GGACGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACGTAGGACACCTCGATCATTAAAAGACAAGTAAGAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754659 129 + 43916225 TCAACTTTGAAGTGG---GGACGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCACATAGGACACCTCGATCATTAAAAGACAAGTAAGAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191276 129 + 75399963 TCAACTTTGAAGTGG---GGACGGTAGGGTGGAGTC-AGTCAGGAAAAGTTTCACATAGGACACCTCGATCATTAAAAGACAAGTAAGAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740531 129 - 7209941 TCAACTTTGAAGTGG---GGACGGtagggtggagtc-agtcaggaaaggtttcacataggacacctcgatcattaaaagacaagtaagagagtccc--aggcagataacctagaaataagcttgcctggctggtg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481287 129 + 3907144 TCAACTTTGAAGTGG---GGATGGTAGGGTGGAGTC-AGTCAGGAAAGGTTTCATATAGGGCACCTCAATCATTAAAAGACAAGTAAAAGAGTCCC--AGGCAGATAACCTAGAAATAAGCCTGCCTGGCTGGTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21494879 129 - 44557958 TCAACTTTGAAGTGG---GGGCAGTCGGGTGGAGTC-AGTCAGAAAAGGTTTCACATAGGACACCTTGATCATTAAAAGTCAAGTAAAAGAGCCCA--AGGCAGATAACCTAGAAATGAGCCTGCCTGGCTGGTG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281856 130 - 5917169 TCGACTTTGAAGTGG---GGGCAGTAGGGTGGAGTCAAGTCAGAAAACGTTTCTCATAGGACACCTTGATCATTAAAAGACAAGTAAAAGAGTCCA--AGGCAGATAACCTAGAAATGAGCCTGCCTGGCTGGTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245580 129 - 10531588 TCAACTTTGAAGTGG---GGGCAGTAGGGTGGAGTC-AGTCAGAAAAGGTTTCACATAGGACACCTTGATCATTAAAAGACAAGTAAAAGAGTCCA--AGGCAGATAACCTAGAAATGAGCCTGCCTGGCTGGTG i aotNan1.NW_018500622v1 I 25 C 0 s proCoq1.NW_012152729v1 2912913 132 + 9850184 tcagctttgaagtggggtgggcaatagggtggagtt-agtcagcaaaggtttcacacaggagaccttaatcaccgaaagacaagtagaagtgcccc--aggcagataacctggaaatgagtgtgcctggctggga i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13666015 127 + 13852661 TCAGCTTTG----GGGAGGGGAAGTAAGGTGGAGTT-AGTCAGGAAAGGTTTCACTTAGGAAACCTTGATCACTGAAAGATA---AGAAGTGCCCCAGAGGCAGATAACCTGGAAATAAGCGTGCCTGGCTGGGG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80428591 100 + 88915250 TTCACTTTGAAG-GG---AGAGGAGAGGATGGAGTC-ATTCAGGAAAAGTTTCACATAG---ACTTCCATCTTTGAAAGATAA-----ACTGCCTG--AGGCA--------------------GTCTGGCTGGGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897571 112 + 1009443 ACAACTTTGCAG-GG---AGAGTGTAGGGTAGGGTC-AATCAGTAAGGGTAT-GCATAGGAGACCTTGATCTTTGAAAGATAAGTATGGATGCTTC--AGGCAGACAAGGTAGAAATGAG--------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22435783 478 - 129401213 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=1088410.000000 s hg38.chr16_GL383557v1_alt 12508 91 + 89672 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGACAAATGAAAGTAGCTAGGAA----AGGCTAGAGTGTAGGGTTC s panTro5.chr16 21438489 91 - 81586097 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGACAAATGAAAGTAGCTAGGAA----AGGCTAGAGTGTAGGGTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505702 91 - 90481686 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGACAAATGAAAGTAGCTAGGAA----AGGCTAGAGTGTAGGGTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738271 91 + 3010529 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGACAAATGAAAGTAGCTAGGAA----AGGCTAGAGTGTAGGGTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846322 91 + 163208435 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAGTGTAGGATTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324747 91 - 74971481 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAATGTAAGGTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034048 91 - 78541002 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAATGTAGGGTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427470 89 + 26466322 TTACAG--CAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAATGTAGGGTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754788 91 + 43916225 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAATGTAGGGTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191405 91 + 75399963 TTACAGCACAGAGGCAAAGACTT--AGAGGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAACGTAGGGTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740660 91 - 7209941 ttacagcacagaggcaaagactt--agaggcaagag-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTACAATGTAGGGTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481416 91 + 3907144 TTAAAGCACAGAGGCAAAGACTT--AGACGCAAGGG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGTTACAATGTAGGGTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495008 91 - 44557958 TTACAGCACAGAGGCAAACACTT--AGAGGCAAGAG-GAAAAAGAAACATTCAGAGAAATGAAAATAGCTAGGAA----ATGCTAGAGTGTAGGGTTC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3281986 91 - 5917169 TTATAGCACAGAGGCAAAGACTT--AGAGGCAAGAG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTAGAGTGTAGGGTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245709 91 - 10531588 TTACAGCACAGAGGCAAAGACTT--AGAGGCATGAG-GAAAAAGAAACATTCAGAGAAATGAAAGTAGCTAGGAA----AGGCTAGAGTGTAGGGTTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2913045 95 + 9850184 ttatagcatagagacaaaggcat--agaggcaagga-gaaaaagaaatatccaaagaaatgtaagtagctagcaatggctggctagattgtagggttc i proCoq1.NW_012152729v1 C 0 I 20 s otoGar3.GL873566 13666142 94 + 13852661 TTACAGCATAGACACAAAGGCACAGAGAGGTGAGGAGGAAAAAGAAACATACAAAGAAATATAAGTAGCTTGCAA----GGTCTAGTGTGTAGGCTTC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436261 85 - 129401213 TTAAAGGACAAAAACAGAGGCTC--AG----GAAAA-GAGGAAGTAACAGTCACAGAAAACCAAGTAGTTAGGAA-----GTCTAGAATGTAGGTTC- i mm10.chr8 I 478 C 0 s canFam3.chr5 80428691 78 + 88915250 TTACAGCAAAGCGGCAAAG------AG----------GAACATGAGACATTCAGAGAAACATAAGTAGGTAGGAA----AGGATAGAGTGTAGGGTTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897683 47 + 1009443 -----------------------------------------------CATTCCCACAAAAGTAAGAATTTAGGGA----AAGTTACAGTGTAAGGTTC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=362577.000000 s hg38.chr16_GL383557v1_alt 12599 40 + 89672 AAGG-TGATAGATAATCAGGGA--GTTACTGTTGAAAGGTTGT s panTro5.chr16 21438580 40 - 81586097 AAGG-TGATAGATAATCAGGGA--GTTACTGTTGAAAGGTTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505793 40 - 90481686 AAGG-TGATAGATAATCAGGGA--GTTACTGTTGAAAGGTTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738362 40 + 3010529 AAGG-TGATAGATAATCAGGGA--GTTACTGTTGAAAGGTTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846413 40 + 163208435 AAGG-TAATAGATAATCAGGGA--GTTACTGTTGAAAGGTTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324838 40 - 74971481 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAGGTTGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034139 40 - 78541002 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAGGTTGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427559 40 + 26466322 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAGGTTGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754879 40 + 43916225 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAGGTTGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191496 40 + 75399963 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAGGTTGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740751 40 - 7209941 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAGGTTGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481507 37 + 3907144 AAGG-TGATAGATAATCAGGGA--GTCACTGTTGAAAG---GT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495099 41 - 44557958 AAGGTTAACAGATCATTGGTGA--GCTACTGTTGAAAGGTTGT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282077 40 - 5917169 AAGG-TGACAGATCATCGGTGA--GCTACTGTTGAAAGGTTGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245800 40 - 10531588 AAGG-TGACAGATCATTGGTGA--GCTACTGTTGAAAGGTTGT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666236 17 + 13852661 --------------------------TACTCCTGAAAGGTTGT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436346 42 - 129401213 AAGG-TCAAAAGAGGTCATCCACTGCGACAGTTGAAGAGTTAG i mm10.chr8 C 0 I 1 s canFam3.chr5 80428769 36 + 88915250 AAGG-TGGAA----AGCAGTAA--TCTGCTTTTGAAGGATGGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897730 36 + 1009443 AAGG-TGAAA----AGCAGTAA--TCTGCTTTTGAAAAGTTGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e proCoq1.NW_012152729v1 2913140 20 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=47563.000000 s hg38.chr16_GL383557v1_alt 12639 4 + 89672 TGAT s panTro5.chr16 21438620 4 - 81586097 TGAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505833 4 - 90481686 TGAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738402 4 + 3010529 TGAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846453 4 + 163208435 TGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324878 4 - 74971481 TGAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034179 4 - 78541002 TGAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427599 4 + 26466322 TGAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754919 4 + 43916225 TGAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191536 4 + 75399963 TGAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740791 4 - 7209941 TGAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481544 4 + 3907144 TGAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495140 4 - 44557958 TGAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282117 4 - 5917169 TGAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245840 4 - 10531588 TGAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2913160 4 + 9850184 TATT i proCoq1.NW_012152729v1 I 20 C 0 s otoGar3.GL873566 13666253 4 + 13852661 CCAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80428805 4 + 88915250 TGAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 897766 4 + 1009443 CAAT i dasNov3.JH569970 C 0 I 350 e micMur3.chr20 54899519 2205 + 72247402 I e mm10.chr8 22436388 1 - 129401213 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=111081.000000 s hg38.chr16_GL383557v1_alt 12643 9 + 89672 AGTCAGTTA s panTro5.chr16 21438624 9 - 81586097 AGTCAGTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505837 9 - 90481686 AGTCAGTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738406 5 + 3010529 ----AGTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846457 5 + 163208435 ----AGTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324882 9 - 74971481 AGTCAGTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034183 9 - 78541002 AGTCAGTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427603 9 + 26466322 AGTCAGTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754923 9 + 43916225 AGTCAGTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191540 9 + 75399963 AGTCAGTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740795 9 - 7209941 AGTCAGTTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481548 9 + 3907144 AGTCAGTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495144 9 - 44557958 AGTCAGTTA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282121 9 - 5917169 AGTCAGTTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245844 9 - 10531588 AGTCAGTTA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2913164 9 + 9850184 ATTCACTTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13666257 9 + 13852661 ATTCACTTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436389 5 - 129401213 ----AGATA i mm10.chr8 I 1 I 2 s canFam3.chr5 80428809 9 + 88915250 ATTCAGTTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898120 9 + 1009443 AATCAGTTA i dasNov3.JH569970 I 350 C 0 e micMur3.chr20 54899519 2205 + 72247402 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=566837.000000 s hg38.chr16_GL383557v1_alt 12652 41 + 89672 AGGGTTGTAAGATATCATGAAAGGTAGTCTTGGCTGTTAGG-- s panTro5.chr16 21438633 41 - 81586097 AGGGTTGTAAGATATCATGAAAGGTAGTCTTGGCTGTTAGG-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505846 41 - 90481686 AGGGTTGTAAGATATCATGAAAGGTAGTCTTGGCTGTTAGG-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738411 41 + 3010529 AGGGTTGTAAGATATCATGAAAGGTAGTCTTGGCTGTTAGG-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846462 41 + 163208435 AGGGTTGTAAGACATCATGAAAGGTAGTCTTGGCTGTTAGG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324891 41 - 74971481 AGGGTTGTAAGATAACACGAAAGGTAATCTTGGTTGTTATG-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034192 41 - 78541002 AGGGTTGTAAGATATCACGAAAGGTAATCTTGGTTGTTATG-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427612 41 + 26466322 AGGGTTGTAAGATATCACGAAAGGTAATCTTGGTTGTTATG-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754932 41 + 43916225 AGGGTTGTAAGATATCACGAAAGGTAATCTTGGTTGTTATG-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191549 41 + 75399963 AGGGTTGTAAGATATCACAAAAGGTAATCTTGGTTGTTATG-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740804 41 - 7209941 AGGGTTGTAAGATATCACGAAAGGTAATCTTGGTTGTTATG-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481557 41 + 3907144 AGGGTTGTAAGATATCACGAAAGGTAATCTTGGCTGTTATG-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495153 41 - 44557958 AGGGTTATAAGATGTCATGAAAGGTAGTCTTGGCTGTTAGG-- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282130 41 - 5917169 AGGGTTCTAAGATGTCATGAAAGGTAGTCTTGGCTGTTAGG-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245853 41 - 10531588 AGGGTTATAAGATGTCATGAAAGGCAGTCTTGGCTGTTAGG-- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54901724 41 + 72247402 AGGGTTGTCAGATATCATGAAATGTTGTCTTGACTGTTCTG-- i micMur3.chr20 I 2205 C 0 s proCoq1.NW_012152729v1 2913173 41 + 9850184 AGGGTTGTCAGATATCATGAAACGTCGTCTTGACTATTCCG-- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13666266 39 + 13852661 AGGGTTGTCAGGTAACATTAAATA--GTCTTGGCTATCCTT-- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436396 40 - 129401213 AGAGCTATCAGATATCA-AAAAGGTAGTTTTGGTTGTCAAA-- i mm10.chr8 I 2 C 0 s canFam3.chr5 80428818 41 + 88915250 AGAGTTATCAGGCACCATGAAAAGCAGTCTTGGCTGTTATG-- i canFam3.chr5 C 0 I 186 s dasNov3.JH569970 898129 43 + 1009443 AGGGTTGTCAGGCATCATGAAAAATAGCCTTGGCTGCTATAGA i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6302411 285 + 6628207 I a score=1978938.000000 s hg38.chr16_GL383557v1_alt 12693 138 + 89672 GATTATTCTTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAACCTATAAAAGACTTTTT-CCTTAAAGCAGAGCTTAAGATCACCACCAAAATACAGACTGCA--AACTTCAGAGGATAATGA s panTro5.chr16 21438674 138 - 81586097 GATTATTCTTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAACCTATAAAAGACTTTTT-CCTTAAAGCAGAGCTTAAGATCACCACCAAAATACAGACTGCA--AACTTCAGAGGATAATGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21505887 138 - 90481686 GATTATTCTTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAACCTATAAAAGACTTTTT-CCTTAAAGCAGAGCTTAAGATCACCACCAAAATACAGACTGCA--AACTTCAGAGGATAATGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738452 138 + 3010529 GATTATTCTTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAACCTATAAAAGACTTTTT-CCTTAAAGCAGAGCTTAAGATCACCACCAAAATACAGACTGCA--AACTTCAGAGGATAATGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846503 138 + 163208435 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAACCTATAAAAGACTTTTT-CCTTAAAGCAGAGCTTAAGATCACGACCAAAATACAGATTGCA--AACTTCAGAGGATAATGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21324932 139 - 74971481 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACATAAAGG-AAAGAAGTACCCTAAAAACTACAAAAGACTTTTTCCCTCAGAGCAGAGCTTAAGATCACCACCAAAATACAGACTGCA--AACTTCAGAGGATAATGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034233 139 - 78541002 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACATAAAGG-AAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCCTCAGAGCAGAGCTTAAGATCACCACCAAAATACAGACTGCA--AACTTCAGAGGATAATGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427653 139 + 26466322 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACATAAAGG-AAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCCTCAGAGCAGAGCTTAAGATCACCACCAAAATACAGATTGCA--AACTTCAGAGGATAATGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20754973 139 + 43916225 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACATAAAGG-AAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCCTCAGAGCAGAGCTTAAGATCACCACCAAAATACAGATTGCA--AACTTCAGAGGATAATGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191590 139 + 75399963 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCCTCAAAGCAGAGCTTAAGATCACCACCAAAATACAGATTGCA--AACTTCAGAGGATAATGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740845 139 - 7209941 GATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACATAAAGG-AAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCCTCAGAGCAGAGCTTAAGATCACCACCAAAATACAGATTGCA--AACTTCAGAGGATAATGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481598 139 + 3907144 GATTATCCCTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGG-AAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCCTCAAAGCAGAGCTTAAGATCACCACCAAAATACAGATTGCA--AACTTCAGAGGATAATGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495194 140 - 44557958 AATTATTCCTCCTTAAGGAGCTACCAAGA--TAA------GTATACAAAGGAAAAGAAGTACCCCAAAAACTATAAAAGACTTTTTCCTTCAAAGTAGAGCTTAAGATCACCACCAAAACATAGATAGCA--AACTTCAGAGGATAATGA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282171 140 - 5917169 AATTATTCCTCCTTAAAGAGCTACCAAGA--AAA------GTACACAAAGGAAAAGAAGTACCCTAAAAACTATAAAAGACTTTTTCCTTCAAAGCAGAGCTTAAGATCATCACCAAAACATAGATAGTA--AACTTCAGAGGATAATGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9245894 140 - 10531588 AATTATTCCTCCTTAAAGAGCTACCAAGA--TAA------GTACACAAAGGAAAAGAAGTACCCTAAAAACTATAAAAGATTTTTTCCTTCAAAGCAGAGCTTAAGATCACCACCAAAACATAGACAGCA--AACTTCAGAGGATAATGA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54901765 128 + 72247402 GATTATTCCTCCTTAAAGAGCTCCCAAGA--TAA------GTATACAAAAGGAAAGAAGTACCCTAAAATTTATAAAAGACTTTTTTC------------CTTGAGATCACCACTAAAACACAGACTGGA--AACTTCAGAAGATAATGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2913214 128 + 9850184 GATTATTCCTCCTTAAAGAGCTCCCAAGG--TAA------GTATACAAAAGGAAAGAAGTACCCTAAAATCTATAAAAGACTTTTTCC------------CTTGAGATCACCACTAAAACACAGACTGGA--AACTTCAGAAGATAATGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13666305 140 + 13852661 GATTATTCCTCCTTAAACAGTTACCAAGC--TAA------ATATACAAAAGGAAAGAAGTATCCTTAAAACTATAAAAGACTGTTTCCTTCAAAGCAGAGCTTGAGATCACCACTAAAACACAGACTACA--AACTTCAGAAGATAATGG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436436 147 - 129401213 GACCTTTCCCCTTTaaaaaaaaaaaaaaa--aaaaaaaaGACAGATAAAAT-AACGAGGTATCCTCCCAAACACCAGAAAGCAGTTCCCTCTGAGCAGAGTTTGAAACGACCTCTACAACACAGACTGCACCAATGTTAGAGGACAACAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80429045 140 + 88915250 GATTATTCCTCCTTAGAGAGCTACCAAGGTTTAA------ACGTACAAAAGGAAACAAGTGCCCTCAAAACTACAAAAAGATTTCCACCTCATAT--GAGTTTGAGATCACTACCAAAACACAGATTACA--AACTTCCTAAGATAATGG i canFam3.chr5 I 186 I 408 s dasNov3.JH569970 898172 130 + 1009443 AATAATTCCTCCTTAAAGAATTACCAAGG--TGG------ATATACAAAAG---AAAAGTGGCCTAAAAACTATAAAAGGCCTTTTCCTACAAAGCAGAGCTTGAGAG-------AAAACATAGACCACA--CATTTCACAAGATAATGA i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6302411 285 + 6628207 I a score=778200.000000 s hg38.chr16_GL383557v1_alt 12831 66 + 89672 ATAA--------------------------------------------------GGGTTTATTTTTGAAG----AAC----TTAAA-GA----------AAGGACA-----C--AACGTATATCTCA-CTCATGTATCAAACA s panTro5.chr16 21438812 67 - 81586097 ATAA--------------------------------------------------GGGTTTATTTTTGAAG----AAC----TTAAAAGA----------AAGGACA-----C--AACGTATATCTCA-CTCATGTATCAAACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506025 67 - 90481686 ATAA--------------------------------------------------GGGTTTATTTTTGAAG----AAC----TTAAAAGA----------AAGGACA-----C--AACGTATATCTCA-CTCATGTATCAAACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738590 66 + 3010529 ATAA--------------------------------------------------GGGTCTATTTTTGAAG----AAC----TTAAA-GA----------AAGGACA-----C--AACATATATCTCA-CTCATGTATCAAACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846641 66 + 163208435 ATAA--------------------------------------------------GGGTCTATTTTTGAAG----AAC----TTAAA-GA----------AAGGACA-----C--AACGTATATCTCA-CTCATGTATCAAACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325071 68 - 74971481 ATAA--------------------------------------------------ATGTCTATTTTTGAAT----AAC----TTAAA-GA--------TTAAGGACA-----C--AACGTGTATCTCA-CTCATGTATCAAACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034372 68 - 78541002 ATAA--------------------------------------------------ATGTCTATTTTTGAAT----AAC----TTAAA-GA--------TTAAGGACA-----C--AACGTGTATCTCA-CTCATGTATCAAACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427792 68 + 26466322 ATAA--------------------------------------------------ATGTCTATTTTTGAAT----AAC----TTAAA-GA--------TTAAGGACA-----C--AACGTGTATCTCA-CTCATGTATCAAACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755112 68 + 43916225 ATAA--------------------------------------------------ATGTCTATTTTTGAAT----AAC----TTAAA-GA--------TTAAGGACA-----C--AACGTGTATCTCA-CTCACGTATCAAACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191729 66 + 75399963 ATAC--------------------------------------------------ATGTCTATTTTTGAAT----AAC----TTAAA-GA----------AAGGACA-----C--AACGTGTATCTCA-CTCATGTATCAAACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6740984 68 - 7209941 ATAA--------------------------------------------------ATGTCTATTTTTGAAT----AAC----TTAAA-GA--------TTAAGGACA-----C--AACGTGTATCTCA-CTCATGTATCAAACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481737 66 + 3907144 ATAA--------------------------------------------------ATGTCTATTTTTTAAG----AAC----TTAAA-GA----------AAGGACA-----C--AACGTGTATCTCA-CTCATGTATCAAACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495334 66 - 44557958 ATAA--------------------------------------------------ATATCTATTTTTGAAA----AAG----TTTAA-GA----------AAGGACT-----C--AACATAGATCTCA-CACATATATCAAACA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282311 66 - 5917169 GTAA--------------------------------------------------ATATCTATTTTTGAAA----AAC----TTAAA-GA----------AAGGACA-----C--AACATAGATCTCA-CACATATACCAAACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246034 66 - 10531588 GTAA--------------------------------------------------ATATCTATTTTTGAAA----AAC----TTTAA-GA----------AAGGACA-----C--AACATAGATCTCA-CACATATATCAAACA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54901893 70 + 72247402 ACAA--------------------------------------------------GTATCTATTTTTAAAG----AATTTAGTTAAA-GA----------AAGGATA-----C--AACATAGATCTCA-CTTAGTTATCAAACA i micMur3.chr20 C 0 I 1313 s proCoq1.NW_012152729v1 2913342 70 + 9850184 ATAA--------------------------------------------------GTATCCATTTTTAAAG----AATTTAGTTAAA-GA----------AAGGATA-----C--AACATAGATTTCA-TTCATGTATTAAACA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13666445 70 + 13852661 GTAA--------------------------------------------------ATGTCAATTTTTAAAG----AATTTAGTTAAG-GA----------AAGGACA-----C--AACATAGTTCTCA-CTCAGGTATCAAACA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436583 136 - 129401213 ACagctgggcttgtaggtacacgcctttaatcctaacacttgggaggcagaggcaggtgggtctttgagttcccaac----ttaca-aagtgtgagtttcaggacagccagg--aatacatatctgagaccctgcctcaaaca i mm10.chr8 C 0 C 0 s canFam3.chr5 80429593 66 + 88915250 ATAA--------------------------------------------------ATGTCTATTTTCAAAG----AAC----TGAAT-TA----------AGGGAAA-----C--AACGTAGATCTCA-CTCACGCATCAAACA i canFam3.chr5 I 408 C 0 s dasNov3.JH569970 898302 68 + 1009443 ATAA--------------------------------------------------ATGTATATTTTTAAAG----AAT----TCAAA-GA----------AAGTACA-----CAGAACAGAGATCCGT-CTCATGCACCAAACA i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6302411 285 + 6628207 I a score=132336.000000 s hg38.chr16_GL383557v1_alt 12897 10 + 89672 CATCACAACC s panTro5.chr16 21438879 10 - 81586097 CATCACAACC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506092 10 - 90481686 CATCACAACC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738656 10 + 3010529 CATCACAACC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846707 10 + 163208435 CATCACAACC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325139 10 - 74971481 CATCACAACC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034440 10 - 78541002 CATCACAACC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427860 10 + 26466322 CATCACAACC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755180 10 + 43916225 CATCACAACC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191795 10 + 75399963 CATCACAACC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741052 10 - 7209941 CATCACAACC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481803 10 + 3907144 CATCACAACC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495400 10 - 44557958 CATCGCAACC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282377 10 - 5917169 CATCGCAACC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246100 10 - 10531588 CATCGCAACC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2913412 10 + 9850184 CATCACAACC i proCoq1.NW_012152729v1 C 0 I 1322 s otoGar3.GL873566 13666515 10 + 13852661 CATCACAACC i otoGar3.GL873566 C 0 I 3 s mm10.chr8 22436719 8 - 129401213 aacaaCAA-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80429659 10 + 88915250 CATCACATGA i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 898370 10 + 1009443 CTTCACCACC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=2120126.000000 s hg38.chr16_GL383557v1_alt 12907 203 + 89672 CTGTGACCAGGACATTAGTATAAGGTG------------TTTGCTAAGGGAGTCCCACCCTCAGGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCTTTAATATATAAATCCACGT----AAAACAAACAAACCAATTAAC----AACAGAAGGCACATAGGAAATATTTTTCA s panTro5.chr16 21438889 203 - 81586097 TTGTGACCAGGACATTAGTATAAGGTG------------TTTGCTAAGGGAGTCCCACCCTCAGGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCTTTAATATATAAATCCATGT----AAAACAAACAAACCAATTAAC----AACAGAAGGCACATAGGAAATATTTTTCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506102 203 - 90481686 TTGTGACCAGGACATTAGTATAAGGTG------------TTTGCTAAGGGAGTCCCACCCTCAGGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCTTTAATATATAAATCCATGT----AAAACAAACAAACCAATTAAC----AACAGAAGGCACATAGGAAATATTTTTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738666 199 + 3010529 TTGTGACCAGGACATCAGTATAAGGTG------------TTTGCTAAGGGACTCCCACCCTCAGGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCTTTAATATATAAATCCACGT----A----AAACAAACCAATTAAC----AACAGAAGGCACATAGGAAATATTTTTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846717 203 + 163208435 TTGTGACCAGGACGTTGGTATAAGGTG------------TTTGCTAAGGGGGCACCACCCTCAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGTATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCTTTAATCTATAAATCCACGT----Aaaacaaacaaaccaactaac----aaCAGAAGGCACATAGGAAATCTTTTTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325149 203 - 74971481 TTGTGACCAGAACATTAGTATAAGTTG------------TTTGCTAAGGGGGTCCCACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGTATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACGT----caaacaaacaaaccaactaac----aaCAGAAGACGCACAGGAAATCTTTTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034450 203 - 78541002 TTGTGACCAGAACATTAGTATAAGTTG------------TTTGCTAAGGGGGTCCCACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGTATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACGT----caaacaaacaaaccaactaac----aaCAGAAGACGCACAGGAAATCTTTTTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14427870 203 + 26466322 TTGTGACCAGAACATTAGTATAAGTTG------------TTTGCTAAGGGGGTCCCACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGTATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACGT----caaacaaacaaaccaactaac----aaCAGAAGACGCACAGGAAATCTTTTTCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755190 203 + 43916225 TTGTGACCAGAACATTAGTATAAGTTG------------TTTGCTAAGGGGGTCCCACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGTATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACGT----caaacaaacaaaccaactaac----aaCAGAAGATGCACAGGAAATCTTTTTCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58191805 203 + 75399963 TTGTGACCAGAACATTAGTATAAGTTG------------TTTGCTAAGGGGGTCCCACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACGT----caaacaaacaaaccaactaac----aaCAGAAGGCGCACAGGAAATCTTTTTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741062 207 - 7209941 TTGTGACAAGAACATTAGTATAAGTTG------------TTTGCTAAGGGGATCACACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGTATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACATcaaacaaacaaacaaaccaactaac----aaCAGAAGATGCACAGGAAATCTTTTTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 481813 203 + 3907144 TTGTGACCAGAACATTAGTATAAGTCG------------TTTGCTAAGGGGGTCCCACCCTGAAGTAATAACACATACTC----------------TAGTAAAGGCAT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTATAAATCCACGT----CAaaccaaccaaccaactaac----aacAGAAGGCGCACAGGAAATCTTTTTCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495410 197 - 44557958 TTGAGACCACGACATTA-TATAAGGTG------------TTTGCTAAGGGAGTGCCACCCTCAAGTGATAACATATACTC----------------TAGTAAAGGTGT--------------TTTCTGTGCATTCCAAAGACAGCTGCTCAGGTTATCCTAAA----TTTGTTCCTAGCCTTAATCTACAAATCCACAT----A----AAACAAACTAACAAAC----AATAGAAGGCATATAGAAAATC-TCTTCA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282387 196 - 5917169 TTGAGACCAGGACATTAGTATAAGGTG------------TTTGCTAAGGGGGTGCCACCCTCAAGTAATAACGCATACTC----------------TAGTAAAGGTGT--------------TTTCTGTGCATTCCAAAGACAGGTGCTCAGGTTATCCCAAA----TTTGTTCCTAGCCTTCATCTACAAATCCACGT----A----AAACAAACTAACAAAC----AACAGAAGGCACATAGAAAA---TCTTCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246110 199 - 10531588 TTGAAACCAGGACATTAGTATAAGGCG------------TTTGCTAAGGGGGTGCCACTCTCAAGTAATAACACATACTC----------------TAGTAAAGGTGT--------------TTTCTGTGCATTCCAAAGACAGGTGCTCAGATTATCCCAAA----TTTATTCCTAGCCTTAATCTACAAATCCACGT----A----AAACAAACTAACAAAC----AATAGAAGGCACATAGAAAATCTTCTTCA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666528 207 + 13852661 CTATGAATAGGACATTAATATAAGATG------------TGTGCTAAGGGGTTCCAGCCCTCAAGTAGTAACATATAACC----------------TAGTAAAAGTGT--------------TTTCTGGGCATTCCAAGGATACTTATGTATGTTATCCCAAA----TTTGGCCCTAGCCTTAATCTACAGATCCAAAT----AAAGCAAATAAATAAACAAACAAGTAACACAAGCCACCTGGGAAATCTTTCTCA i otoGar3.GL873566 I 3 C 0 s mm10.chr8 22436727 234 - 129401213 -----AACAAGATAGTAGATGAAGGTAGACTTTTAGAGTTTAGTTAATAAAAGACAAGTCTCACTCAGTCATCCACACATCACAGCCTTGCTGGAGTGATACAGGTCTGAGATGCTAAAAGATTCCTGTTAATT--AACAAGAGCTCCCCAGGCATTCTAAAAACACCTGCACTTTAGTCCTAATCCATAAATTCAAGT----A--------AAACCAACCAAA----CATGGAAGCCACATAGGGAATCTTTTTCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80429670 196 + 88915250 TTGTGAGCAGGACACCA---TAAGATG------------TATACTACTGTGTTCCTACCTTCAAGTAATAACATAGAATC----------------AGGTAAAGGAAT------------CATCTCTATGCACTCCAAAGACAGCTAAGCAGGTTATTCCAAA----TTTGGCTTTAGCCTTCATCTACAAATCCAAAT----A----AAACAAACCACCT--C----AACAGAAGCCACATGGGAAAACCTCTTCA i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 898380 187 + 1009443 TTGTGAGCAGGGCATTA--TTAAGATG------------TGTGCAACAGAGTTCCTGTCCTCCCATAATAACATATAATC----------------TAGTAAAGAGGT--------------GGTCT--CCACTCCAAAGATATCTAC---AGTTATCCTAAG----TTTGACTCTAGCCTTAATCTACCAATCCAAGT----A----AAACAAA-----TAAC----AAGAAATGTCATATTAGAAATCTTTTGCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=19157.000000 s hg38.chr16_GL383557v1_alt 13110 2 + 89672 CT s panTro5.chr16 21439092 2 - 81586097 CT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506305 2 - 90481686 CT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738865 2 + 3010529 CT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846920 2 + 163208435 CT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325352 2 - 74971481 CT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034653 2 - 78541002 CT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428073 2 + 26466322 CT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755393 2 + 43916225 CT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192008 2 + 75399963 CT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741269 2 - 7209941 CT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482016 2 + 3907144 CT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495607 2 - 44557958 CT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282583 2 - 5917169 CT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246309 2 - 10531588 CT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666735 2 + 13852661 GT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436961 2 - 129401213 AT i mm10.chr8 C 0 C 0 s canFam3.chr5 80429866 2 + 88915250 AT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898567 0 + 1009443 C e saiBol1.JH378225 6302411 285 + 6628207 I a score=436074.000000 s hg38.chr16_GL383557v1_alt 13112 64 + 89672 TCCGCCTGT-----TTTTCTTTTCTTTCC-----CTTttttttttttt----ttttcccttgagatggggtctcatta s panTro5.chr16 21439094 66 - 81586097 TCCGCCTGT-----ttttcttttctttcc-----cttttttttttttt--cttttttccttgagatggggtctcatta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506307 65 - 90481686 TCCGCCTGT-----ttttcttttctttcc-----cttttttttttttt---tttttcccttgagatggggtctcatta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738867 68 + 3010529 TCCACCTGT-----ttttcttttctttcc-----cttttttttttttttttttttttccttgagatggggtctcatta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846922 65 + 163208435 TCCGCCTGT-----ttttcttttctttcc-----tttttttttttttt---ttttttccttgagatggggtctcatta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325354 68 - 74971481 TCTGCCTGt-----ttttcttttcttttc-----ttattttttttcttttttattttccttgagatggggtctcatta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034655 68 - 78541002 TCTGCCTGt-----ttttcttttcttttc-----ttattttttttcttttttattttccttgagatggggtctcatta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428075 68 + 26466322 TCTGCCTGT-----ttttcttttcttttc-----ttattttttttcttttttcttttccttgagatggggtctcatta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755395 73 + 43916225 TCTGCCTGtttttcttttcttttcttttc-----ttattttttttcttttttcttttccttgagatggggtctcatta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192010 73 + 75399963 TCTGCCTGT-----ttttcttttcttttcttttattattttttttcttttttcttttccttgagatggggtcccatta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741271 68 - 7209941 TCTGCCTGt-----ttttcttttcttttc-----ttattttttttcttttttattttccttgagatggggtctcatta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482018 69 + 3907144 TCCGCCTGT-----TTTTCTTTTCTTTCCT----TTtttttttttcttttttattttccctgagatggggtctcatta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495609 58 - 44557958 TCCACCTGT-----TTTTCttttcctttc-----ttt-----tttttt-----ttttccttgagatggggtctcattc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282585 60 - 5917169 TCCACCTGT-----TTTTCTTTTCTTTCC-----TTt---tctttttt-----ttttccttgagatggggtctcaatc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246311 63 - 10531588 TCCACCTGt-----ttttcttttcttttc-----tttttttttttttt-----ttttccttgagatggggtctcattc i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666737 20 + 13852661 TCAACTTGT-----TTTTTTTATTA----------------------------------------------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22436963 29 - 129401213 TCAA--GAA-----TTCTCTTTATTCTTC-----TTCTTGT------------------------------------- i mm10.chr8 C 0 C 0 e canFam3.chr5 80429868 0 + 88915250 C e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898567 0 + 1009443 C e saiBol1.JH378225 6302411 285 + 6628207 I a score=319823.000000 s hg38.chr16_GL383557v1_alt 13176 35 + 89672 tgttgcccaagctggactcaaacctcaaactcctg s panTro5.chr16 21439160 35 - 81586097 tgttgcccaagctggactcaaacctcaaactcctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506372 35 - 90481686 tgttgcccaagctggactcaaacctcaaactcctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738935 35 + 3010529 tgttgcccaagctggactcaaacctcaaactcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53846987 35 + 163208435 tgttgcccaagctggactcaaacatcaaactcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325422 35 - 74971481 cgttgcccaagctggattcaaacctcaaactcctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034723 35 - 78541002 cgttgcccaagctggattcaaacctcaaactcctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428143 35 + 26466322 cgttgcccaagctggattcaaacctcaaactcctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755468 35 + 43916225 cgttgcccaagctggattcaaacctcaaactcctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192083 35 + 75399963 cgttgcccaagctggattcaaacctcaaactcctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741339 35 - 7209941 cgttgcccaagctggattcaaacctcaaactcctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482087 35 + 3907144 tgttgccttagctggattcaaacctcaaactcctg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495667 35 - 44557958 tgttgcccaacctggactcaaacctcaaactcctg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282645 35 - 5917169 tgttgcccaacctggactcaaacctcaaactcctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246374 35 - 10531588 tgttgcccagcctggactcaaacctcaaactcctg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80429868 0 + 88915250 C e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22436992 0 - 129401213 C e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898567 0 + 1009443 C e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13666757 0 + 13852661 C a score=133477.000000 s hg38.chr16_GL383557v1_alt 13211 16 + 89672 ggttcaaatgattctc s panTro5.chr16 21439195 16 - 81586097 ggttcaaatgattctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506407 16 - 90481686 ggttcaaatgattctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738970 16 + 3010529 ggttcaaatgattctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847022 16 + 163208435 ggttcaaatgattctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325457 16 - 74971481 ggttcaaatgatcttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034758 16 - 78541002 ggttcaaatgatcttc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428178 16 + 26466322 ggttcaaatgatcttc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755503 16 + 43916225 ggttcaaatgatcttc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192118 16 + 75399963 ggttcaaatgatcttc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741374 16 - 7209941 ggttcaaatgatcttc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482122 16 + 3907144 ggttcaaatgatcttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495702 16 - 44557958 ggttcaaatgatcctc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282680 15 - 5917169 ggttcaaatgatcct- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246409 16 - 10531588 ggttcaaatgatcctc i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 898567 10 + 1009443 AGTTAACATG------ i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80429868 0 + 88915250 C e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22436992 0 - 129401213 C e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13666757 0 + 13852661 C a score=597899.000000 s hg38.chr16_GL383557v1_alt 13227 79 + 89672 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgccaccatgcctggcTTTGTTTCC-TTTTTTAAATT s panTro5.chr16 21439211 79 - 81586097 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgccaccatgcctggctttgtttcc-ttttTTAAATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506423 79 - 90481686 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgccaccatgcctggctttgtttcc-ttttTTAAATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 738986 79 + 3010529 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgccaccatgcctggctttgtttcc-ttttTTAAATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847038 79 + 163208435 ccacctcagcctcctgagccaagtagctgggtctataggtatatgccaccatgcctggctttgtttcc-ttttTTAAATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325473 79 - 74971481 ccacctcagcctcctgagccaagtagctgggtctacacgtatatgccaccaagcctggctttgtttcc-ttttttAAATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034774 79 - 78541002 ccacctcagcctcctgagccaagtagctgggtctacacgtatatgccaccaagcctggctttgtttcc-ttttttAAATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428194 79 + 26466322 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgccaccaagcctggctttgtttcc-ttttTTAAATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755519 79 + 43916225 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgctaccaagcctggctttgtttcc-ttttATAAATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192134 79 + 75399963 ccacctcagtctcctgagccaagtagctgggtctacaggtatatgccaccaagcctggctttgtttcc-ttttTTAAATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741390 79 - 7209941 ccacctcagcctcctgagccaagtagctgggtctacaggtatatgctaccaagcctggctttgtttcc-ttttttAAATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482138 79 + 3907144 ccacctcaatctcctgagccaagtagctgggtctacaggtatatgccaccaagcctggctttgtttcc-ttttttAAATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495718 64 - 44557958 ccacctcagcctccTGAGCCAAGTAGC----------------TGTCACCATGCCTGGCTTTGTCTCCTTTTTTTAATTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282695 64 - 5917169 tcacctcagcctcctgagccaagtagc----------------tgTCACCATGCCTGGTTTTGTTTCCTTTTTTTAATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246425 64 - 10531588 ccacctcagcctcctgagccaagtagc----------------tgtcaccatgcctggctttgtttcctttttttaACTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22436992 24 - 129401213 ---------------------AGTAA----------------------------------TTGTTTTG-TTTTCTAAATC i mm10.chr8 C 0 I 1 s canFam3.chr5 80429868 32 + 88915250 ACACTTTAGC-----------AGTA----------------------------------TTAGTTTCA-TTTTT--ATTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898577 15 + 1009443 ----------------------------------------------------------------TTCA-TTTTTTAATTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13666757 0 + 13852661 C a score=502788.000000 s hg38.chr16_GL383557v1_alt 13306 39 + 89672 CAAGTTTATGTTGAAGAGTAACTAAAGAATTATTAAATG s panTro5.chr16 21439290 39 - 81586097 CAAGTTTATGTTGAAGAGTAACTAAAGAATTATTAAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506502 39 - 90481686 CAAGTTTATGTTGACGAGTAACTAAAGAATTATTAAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739065 39 + 3010529 CAAGTTTATGTTGAAGAGTAACTAAAGAATTATTAAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847117 35 + 163208435 CAAGTTTATGTTGAAGAG----TAAAGAATGATTAAATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325552 39 - 74971481 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034853 39 - 78541002 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428273 39 + 26466322 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755598 39 + 43916225 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192213 39 + 75399963 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i chlSab2.chr5 C 0 I 319 s manLeu1.NW_012101698v1 6741469 39 - 7209941 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482217 39 + 3907144 CAAGTTTATGTTGAAGAATAACTAAAGAATGATTAAATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495782 39 - 44557958 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282759 39 - 5917169 CAAGTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246489 39 - 10531588 CAACTTTATGTTGAAGAGTAACTAAAGAATGATTAAATG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666757 39 + 13852661 CAAGATTATGTTGAAGAGTGACTAAAGAATGATTAAATG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22437017 39 - 129401213 CAAGTTTATGTTGAAGAGTAATGGAAGGCTGATTAAATT i mm10.chr8 I 1 C 0 s canFam3.chr5 80429900 39 + 88915250 CAAGCTTATATTGAAGGATAGTTAATGAATGATTAAATA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898592 35 + 1009443 CAAGATTATACCAAAAAGTAGCTAAAGAATAAATA---- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=79809.000000 s hg38.chr16_GL383557v1_alt 13345 7 + 89672 GTATTAG s panTro5.chr16 21439329 7 - 81586097 GTATTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506541 7 - 90481686 GTATTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739104 7 + 3010529 GTATTAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847152 7 + 163208435 GTATTGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325591 7 - 74971481 GTATTAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034892 7 - 78541002 GTATTAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428312 7 + 26466322 GTATTAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755637 7 + 43916225 GTATTAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192571 7 + 75399963 GTATTAG i chlSab2.chr5 I 319 C 0 s manLeu1.NW_012101698v1 6741508 7 - 7209941 GTATTAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482256 7 + 3907144 GTATTAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495821 7 - 44557958 GTATTAG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282798 7 - 5917169 GCATTAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246528 7 - 10531588 GCATTAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666796 7 + 13852661 GCATTAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22437056 7 - 129401213 GCTTTAT i mm10.chr8 C 0 I 753 s canFam3.chr5 80429939 7 + 88915250 TCATTAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898627 7 + 1009443 GCACTAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=169795.000000 s hg38.chr16_GL383557v1_alt 13352 14 + 89672 GATATTTACATTTG s panTro5.chr16 21439336 14 - 81586097 GATATTTACATTTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506548 14 - 90481686 GATATTTACATTTG i panPan2.chr16 C 0 M 288 s gorGor5.CYUI01000018v1 739111 14 + 3010529 GATATTTACATTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847159 14 + 163208435 GATATTTACATTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325598 14 - 74971481 GATATTTACATCTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034899 14 - 78541002 GATATTTACATCTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428319 14 + 26466322 GATATTTACATCTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755644 14 + 43916225 GATATTTACATCTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192578 14 + 75399963 GATATTTACATCTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741515 14 - 7209941 GATATTTACATCTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482263 14 + 3907144 GATATTTACATCTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495828 14 - 44557958 GATATGTACATGTG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282805 14 - 5917169 GATATGTACATGTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246535 14 - 10531588 GATATGTATATGTG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666803 14 + 13852661 GATCTTTACATTTC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22437816 14 - 129401213 GATTTTTACATTTG i mm10.chr8 I 753 C 0 s canFam3.chr5 80429946 14 + 88915250 GATCTTTACACTTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898634 14 + 1009443 GAACTTTACATCTG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=121332.000000 s hg38.chr16_GL383557v1_alt 13366 10 + 89672 AAATGGTTAA s panTro5.chr16 21439350 10 - 81586097 AAATGGTTAA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739125 10 + 3010529 AAATGGTTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847173 10 + 163208435 AAATGGTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325612 10 - 74971481 AAATGGTTAA i rheMac8.chr20 C 0 I 11 s macFas5.chr20 21034913 10 - 78541002 AAATGGTTAA i macFas5.chr20 C 0 I 11 s macNem1.NW_012011355v1 14428333 10 + 26466322 AAATGGTTAA i macNem1.NW_012011355v1 C 0 I 11 s cerAty1.NW_011999143v1 20755658 10 + 43916225 AAATGGTTAA i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58192592 10 + 75399963 AAATGGTTAA i chlSab2.chr5 C 0 I 45 s manLeu1.NW_012101698v1 6741529 10 - 7209941 AAATGGTTAA i manLeu1.NW_012101698v1 C 0 I 11 s colAng1.NW_012123265v1 482277 10 + 3907144 AAATGGTTAA i colAng1.NW_012123265v1 C 0 I 11 s calJac3.chr20 21495842 10 - 44557958 AAATTGTTAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282819 10 - 5917169 AAATGGTTGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246549 10 - 10531588 AAATGGTTAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666817 10 + 13852661 AAGTGGTTAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22437830 10 - 129401213 AAATGGCTAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80429960 10 + 88915250 AAATGGTTAA i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 898648 8 + 1009443 AAATGGTT-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=27716.000000 s hg38.chr16_GL383557v1_alt 13376 4 + 89672 TAAA s panTro5.chr16 21439360 4 - 81586097 TAAA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739135 4 + 3010529 TAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847183 4 + 163208435 TAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325633 4 - 74971481 TGAA i rheMac8.chr20 I 11 I 7 s macFas5.chr20 21034934 4 - 78541002 TGAA i macFas5.chr20 I 11 I 7 s macNem1.NW_012011355v1 14428354 4 + 26466322 TGAA i macNem1.NW_012011355v1 I 11 I 7 s cerAty1.NW_011999143v1 20755669 2 + 43916225 --AA i cerAty1.NW_011999143v1 I 1 I 17 s manLeu1.NW_012101698v1 6741550 4 - 7209941 TGAA i manLeu1.NW_012101698v1 I 11 I 7 s colAng1.NW_012123265v1 482298 4 + 3907144 TGAA i colAng1.NW_012123265v1 I 11 I 7 s calJac3.chr20 21495852 4 - 44557958 TAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282829 4 - 5917169 TAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246559 4 - 10531588 TAAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666827 4 + 13852661 TAAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22437840 4 - 129401213 TAAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80429971 3 + 88915250 TAA- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 898656 2 + 1009443 --AA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e panPan2.chr16 21506562 288 - 90481686 M e chlSab2.chr5 58192602 45 + 75399963 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=25251.000000 s hg38.chr16_GL383557v1_alt 13380 3 + 89672 ACA s panTro5.chr16 21439364 3 - 81586097 ACA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739139 3 + 3010529 ACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847187 3 + 163208435 ACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325644 3 - 74971481 ACA i rheMac8.chr20 I 7 I 18 s macFas5.chr20 21034945 3 - 78541002 ACA i macFas5.chr20 I 7 I 18 s macNem1.NW_012011355v1 14428365 3 + 26466322 ACA i macNem1.NW_012011355v1 I 7 I 18 s manLeu1.NW_012101698v1 6741561 3 - 7209941 ACA i manLeu1.NW_012101698v1 I 7 I 18 s colAng1.NW_012123265v1 482309 3 + 3907144 ACA i colAng1.NW_012123265v1 I 7 I 18 s calJac3.chr20 21495856 3 - 44557958 ACA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282833 3 - 5917169 ACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246563 3 - 10531588 ACA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666831 3 + 13852661 ACA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22437844 3 - 129401213 ACA i mm10.chr8 C 0 C 0 s canFam3.chr5 80429974 3 + 88915250 GCC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898658 3 + 1009443 ATG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e panPan2.chr16 21506562 288 - 90481686 M e chlSab2.chr5 58192602 45 + 75399963 I e cerAty1.NW_011999143v1 20755671 17 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=14681.000000 s hg38.chr16_GL383557v1_alt 13383 2 + 89672 AC s panTro5.chr16 21439367 2 - 81586097 AC i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739142 2 + 3010529 AC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847190 2 + 163208435 AC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325665 2 - 74971481 AT i rheMac8.chr20 I 18 C 0 s macFas5.chr20 21034966 2 - 78541002 AT i macFas5.chr20 I 18 C 0 s macNem1.NW_012011355v1 14428386 2 + 26466322 AT i macNem1.NW_012011355v1 I 18 C 0 s cerAty1.NW_011999143v1 20755688 2 + 43916225 AT i cerAty1.NW_011999143v1 I 17 C 0 s manLeu1.NW_012101698v1 6741582 2 - 7209941 AT i manLeu1.NW_012101698v1 I 18 C 0 s colAng1.NW_012123265v1 482330 2 + 3907144 AT i colAng1.NW_012123265v1 I 18 C 0 s calJac3.chr20 21495859 2 - 44557958 AC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282836 2 - 5917169 AC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246566 2 - 10531588 AC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666834 2 + 13852661 AC i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22437847 1 - 129401213 -C i mm10.chr8 C 0 I 1 s canFam3.chr5 80429977 2 + 88915250 AC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898661 2 + 1009443 AT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e panPan2.chr16 21506562 288 - 90481686 M e chlSab2.chr5 58192602 45 + 75399963 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=77906.000000 s hg38.chr16_GL383557v1_alt 13385 7 + 89672 CT-----TAAAT s panTro5.chr16 21439369 7 - 81586097 CT-----TAAAT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739144 7 + 3010529 CT-----TAAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847192 7 + 163208435 CT-----TAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325667 7 - 74971481 CT-----TAAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034968 7 - 78541002 CT-----TAAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428388 7 + 26466322 CT-----TAAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755690 7 + 43916225 CT-----TAAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192647 7 + 75399963 CT-----TAAAT i chlSab2.chr5 I 45 C 0 s manLeu1.NW_012101698v1 6741584 7 - 7209941 CT-----TAAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482332 7 + 3907144 CT-----TAAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495861 7 - 44557958 CT-----TAAAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282838 7 - 5917169 CT-----TAAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246568 7 - 10531588 CT-----TAAAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666837 7 + 13852661 TT-----AAAAT i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22437849 6 - 129401213 -T-----TAAAA i mm10.chr8 I 1 I 284 s canFam3.chr5 80429979 7 + 88915250 CT-----TAAAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898663 12 + 1009443 CTTATGATAAAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=388685.000000 s hg38.chr16_GL383557v1_alt 13392 44 + 89672 ACATACACTCAAAAGTACTGGGCATGAAATTAAAATTATAGAAG s panTro5.chr16 21439376 44 - 81586097 ACATACACTCAAAAGTACTGGGCATGAAATTAAAATTATAGAAG i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739151 44 + 3010529 ACATACACTCAAAAGTACTGGGCATGAAATTAAAATTATAGAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847199 44 + 163208435 ACATACACTCAAAAGTACTGGGCATGAAATTAAAATTATAGAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325674 44 - 74971481 ACATACACTCAAAAGTACTGGGGATGAAATTAAAATTATAGAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21034975 44 - 78541002 ACATACACTCAAAAGTACTGGGGATGAAATTAAAATTATAGAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428395 44 + 26466322 ACATACACTCAAAAGTAGTGGGGATGAAATTAAAATTATAGAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755697 44 + 43916225 ACATACACTCAAAAGTACTGGGAATGAAATTAAAATTATAGAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192654 44 + 75399963 ACATACACTCAAAAGTACTGGGGATGAAATTAAAATTATAGAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741591 44 - 7209941 ACATACACTCAAAAGTACTGGGGATGAAATTAAAATTATAGAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482339 44 + 3907144 ACAtacactcaaaagtactgggcatgaaattaaaattatagaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495868 43 - 44557958 ACATATACTCAAAAGTACTGGGCATGAACTT-AAAATACAGAAG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282845 44 - 5917169 ACATACACTCAAAAGTACTGGGCATGAACTTAAAAATACAGAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246575 44 - 10531588 ACATATACTCAAAAGTACTGGGCATGAACTTAAAAATACAGAAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666844 18 + 13852661 AAATATACACA--------------------------ACAGAAT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22438139 29 - 129401213 acacacgcgcacacatacTG----------TAAA-----AGAAG i mm10.chr8 I 284 C 0 s canFam3.chr5 80429986 44 + 88915250 ATAAACACACAAAACTACTGGGCATGTACTTAAGAAAACAAAAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 898675 44 + 1009443 ACACACGCACAAAACTACTGAGTATATACTTAACAAAACAAAAG i dasNov3.JH569970 C 0 I 844 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=671906.000000 s hg38.chr16_GL383557v1_alt 13436 87 + 89672 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTTGGTCCAATTAAT--AGA---------TTTTTT-TTCATTGCTTTCAAACAATTTTAT s panTro5.chr16 21439420 85 - 81586097 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTTGGTCCAATTAAT--AGA---------TTTTTT---CATTGCTTTCAAACAATTTTAT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739195 87 + 3010529 TTGTTTCTCTCCACAGTGTCCCAGAATATTACCCTAAGCTTTGGTCCAATTAAT--AGA---------TTTTTT-TTCATTGCTGTTAAATAATTTTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847243 88 + 163208435 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTTGGTCCAATTAAT--AGA---------TTTTTTTTTCATTGCTTTAAGGCAATTTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325718 85 - 74971481 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTT-GTCCAATTAAT--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035019 85 - 78541002 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTT-GTCCAATTAAT--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428439 85 + 26466322 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTT-GTCCAATTAAT--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755741 85 + 43916225 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTT-GTCCAATTAAT--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192698 85 + 75399963 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTT-GTCCAATTAAT--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741635 85 - 7209941 TTGTTTCTCTCCAAAGTGTCCCAGAATATTACCCTAAGCTTT-GTCCAATTAAC--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482383 85 + 3907144 ttgtttctctccaaagggtcccacaatattaccctaagcttT-GTCCAATTAAT--AGA---------TTTTTT--TCATTGCTTTAAAGCAATTTTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21495911 89 - 44557958 TCGTTTCTCTTCAAAGTGTCCCAGAATATTACCTTAGGCTTTGGTCTAATTAAT--AGA------TTTTTTTTT--TCATTGCTTTAAAGCAAATTTAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282889 93 - 5917169 TTGTTTCTCTTCAAAGTGTCCCAGAATATTACTTTAGGCTTTGGTCCAATTAAT--AGAAGA--TTTTTTTTTT--TCATTGCTTTAAAGCAAGTTTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246619 91 - 10531588 TTGTTTCTCTTCAAAGTGTCCCAGAATATTACCTTAGGCTTTGGTCCAATTAAT--AGAAG----ATTTTTTTT--TCATTGCTTTAAGGCAAGTTTAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666862 41 + 13852661 TTGTTTCTCTTGAAAGCAGGACAAAAGA---------------GT-------AT--AAG---------ATTTCT------------------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22438168 88 - 129401213 TTCTGTTTTTCTAAAACGTCCTGGAAGATTATCTTAAGATTTGATTAAATAAATTATAA---------CATTTA--ACACAGAGTTTAAACAATTTTAT i mm10.chr8 C 0 I 6457 s canFam3.chr5 80430030 95 + 88915250 TTGTTTCCTTCCAAAGTATCCTGGAATTTTACCCAAAGCCTCAGTCCAATAAAC--ATAAAATTTCTTTTTCTT--TCCTTGCTTTAAAACAAATTTAT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=111255.000000 s hg38.chr16_GL383557v1_alt 13523 24 + 89672 ATTTATTGGG------GTTTTTTTTAATCA s panTro5.chr16 21439505 23 - 81586097 ATTTATTGGG-------TTTTTTTTAATCA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739282 24 + 3010529 ATTTATTGGG------GTTTTTTAAAATCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847331 23 + 163208435 ATTTATTGGG-------ATTTTTTTAATTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325803 24 - 74971481 ATTTATTGGG------TTTTTTTTTAATTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035104 24 - 78541002 ATTTATTGGG------TTTTTTTTTAATTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428524 24 + 26466322 ATTTATTGGG------TTTTTTTTTAATTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755826 25 + 43916225 ATTTATTGGGT-----TTTTTTTTTAATTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192783 24 + 75399963 ATTTATTGGG------GTTTTTTTTAATTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741720 24 - 7209941 ATTTATTGGG------TTTTTTTTTAATTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482468 23 + 3907144 ATTTATTGGG-------TTTTTTTAAATTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21496000 23 - 44557958 ATTTATTGGG-------TTTTTAAAAATTA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3282982 23 - 5917169 ATTCGTTGAG-------TTTTTAAAAATTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246710 23 - 10531588 ATTTATTGGG-------TTTTTAAAAATTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666903 1 + 13852661 ---------G-------------------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80430125 20 + 88915250 ----------CCCTATTTTTTTTTAAGTCA i canFam3.chr5 C 0 I 506 e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=191061.000000 s hg38.chr16_GL383557v1_alt 13547 31 + 89672 GCCCATTAAATTTTAAAAATTTAA-TTTTTTT s panTro5.chr16 21439528 31 - 81586097 GCCCATTAAATTTTAAAAATTTAA-TTTTTTT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739306 31 + 3010529 GCCCATTAAATTTTAAAAATTTAA-TTTTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847354 32 + 163208435 GCACATTAAATTTTTAAAATTTAATTTTTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325827 32 - 74971481 GCCCATTGAATTTTTAAAATTTAACTTTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035128 32 - 78541002 GCCCATTGAATTTTTAAAATTTAACTTTTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428548 32 + 26466322 GCCCATTGAATTTTTAAAATTTAACTTTTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755851 32 + 43916225 GCCCATTGAATTTTTAAAATTTAACTTTTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192807 32 + 75399963 GCCCATTGAATTTTTAAAATTTAACTTTTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741744 32 - 7209941 GCCCATTGAATTTTTAAAATTTAACTTTTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482491 32 + 3907144 GCCCACTGAATTTTTAAAATTTAACTTTTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21496023 31 - 44557958 GCCCATTCAATTTTTAAAATTTGA-CTTTTTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3283005 31 - 5917169 GCCTATTAAATTTTTAAAATTTGA-CTTTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9246733 24 - 10531588 GCCCA-------TTTAAAATTTGC-CTTTTTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666904 7 + 13852661 -------------------------TTTTCTT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=124676.000000 s hg38.chr16_GL383557v1_alt 13578 16 + 89672 AATTAACAGAAATTGG s panTro5.chr16 21439559 16 - 81586097 AATTAACAGAAATTGG i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739337 16 + 3010529 AATTAACAGAAATTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847386 16 + 163208435 AATTAACAGAAATTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325859 16 - 74971481 AATTAATAGAAATTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035160 16 - 78541002 AATTAATAGAAATTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428580 16 + 26466322 AATTAACAGAAATTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755883 16 + 43916225 AATTAACAGAAATTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192839 16 + 75399963 AATTAACAGAAATTGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741776 16 - 7209941 AATTAACAGAAATTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482523 16 + 3907144 AATTAACAGAAATTGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21496054 16 - 44557958 AATTAAAAGAAACTGG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3283036 16 - 5917169 AATTAAAAGAAATTGg i cebCap1.NW_016107433v1 C 0 I 2065 s aotNan1.NW_018500622v1 9246757 16 - 10531588 AATTAAAAGAAATTGG i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13666911 0 + 13852661 C a score=580167.000000 s hg38.chr16_GL383557v1_alt 13594 97 + 89672 ACACTtttgggaggccaaggtgaaaggaatgcttgaggccaggagttcaaaaccaccctgggcaacacagcaagaacctgtctctacaaaaTATATA s panTro5.chr16 21439575 97 - 81586097 ACACTtttgggaggccaaggtgaaaggaatgctggaggccaggagttcaaaaccaccctgggcaacacagcaagaacctgtctctacaaaaTATATA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739353 97 + 3010529 ACACTtttgggaggccaaggtgaaaggaatgcttgaggccaggagttcaaaaccaccctgggcaacacagcaagaacctgtctctacaaaaTATATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847402 96 + 163208435 Acac-tttgggaggccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccctgggcaacacagcaagaacctgtctctacagaataaatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325875 97 - 74971481 ACACTtttgggaggccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccttgggcaacacagtaagaacctgtctctatattttttata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035176 97 - 78541002 ACACTtttgggaggccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccttgggcaacacagtaagaacctgtctctatattttttata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428596 97 + 26466322 ACACTtttgggaagccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccttgggcaacacagtaagaacctgtctctatattttttata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755899 97 + 43916225 ACACTtttgggaggccaaggtggaaggaatgcttgaggccaggaattcaaaaccaccttgggtaacacagtaagaacctgtctctatattttttata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192855 97 + 75399963 ACACTtttgggaggccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccttgggcaacacagtaagaacctgtctctatattttttata i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741792 97 - 7209941 ACACTtttgggaggccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccttgggcgacacagtaagaacctgtctctatattttttata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482539 97 + 3907144 ACACTtttgagaggccaaggtggaaggaatgcttgaggccaggagttcaaaaccaccctgggcaacacagtaagaacctgtctctgtattttttata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21496070 95 - 44557958 GTACTtttgggaggcaaaggtggagggagcacttcaggccaggagttcaaaaccaccctgggccacaaagcaagaccctgtctctacaaaaT--Att i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9246773 95 - 10531588 GTACTtttgggaggcaaaggtggagggagcatttcaggctaggagttcaaaaccaccctgggccacaaagcaagaccctgtctctacaaaat--aat i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13666911 0 + 13852661 C a score=1071925.000000 s hg38.chr16_GL383557v1_alt 13691 174 + 89672 TATA----------------tttttgagacggagtctcgctctgtggcccaggctggagtggagtggtgcaatctcggctcactgcaacctccgcctcccaggtacaagcgattctcctgcctcagtctccctaggagctgggattacaagcgcgccaccacgcctgactaatttttgtatttttagtag s panTro5.chr16 21439672 174 - 81586097 TATA----------------tttttgagacggagtctcgctctgtggcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcccaggtacaagtgattctcctgcctcagtctccctaggagctgggattacaagcgcgccaccacgcctgactaatttttgtatttttagtag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739450 174 + 3010529 TATA----------------tttttgagacggagtctcgctctgtggcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcccaggtacaagcgattctcctgcctcagtctccctaggagctgggattacaagcgcgccaccacgcctgactaatttttgtattttcagtag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847498 174 + 163208435 tctc----------------tttttttgagacagtctcgctctgtggcccagggtggagtgccatggtgcaatctcggctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagtctccctaggagctgggattacaagtgcaccaccatgcccgactaatttttgtatttttagtag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21325972 186 - 74971481 tttc-t---ttttttttttttttttgagacggagcctcactctgtggcccagggtagagtgcagtggtgcaatctaggctcactgcaacctccacctcccaggttcaagcgattcacctgcctcagtctccctaggagctgggattacaagcacaccatcacgcccaactaatttttgtatttttagtag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035273 186 - 78541002 tttc-t---ttttttttttttttttgagacggagcctcactctgtggcccagggtggagtgcagtggtgcaatctaggctcactgcaacctccacctcccaggttcaagcgattcacctgcctcagtctccctaggagctgggattacaagcacaccatcacgcccaactaatttttgtatttttagtag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428693 187 + 26466322 tttctt---ttttttttttttttttgagacggagcctcactctgtggcccagggtggagtgcagtggtgcaatctaggctcactgcaacctccacctcccaggttcaagcgattcacctgcctcagtctccctaggagctgggattacaagcacaccatcacgcccaactaatttttgtatttttagtag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20755996 189 + 43916225 tata-tatatatattttttttttttgagacggagcctcactctgtggcccagggtggagtgcagtggtgcaatctaggctcactgcaacctccgcctcccaggttcaagcgattcacctgcctcagtctccctaggagctaggattacaagcacaccatcacgcccgactaatttttgtatttttagtag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58192952 181 + 75399963 tttc---------ttttttttttttgagatggagcctcactcagtggcccagggtggagtgcagtggtgcaatctaggctcactgcaacctccgcctcccaggttcaagcgattcacctgcctcagtctccctaggagctgggattacaagcacaccaccatgcccgactaatttttgtatttttagtag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6741889 185 - 7209941 tttc-----ttttttttttttttttgagacggagcctcactcggtggcccagggtggaatgcagtggtgcaatctaggctcactgcaacctccgcctcccaggttcaagcgattcacctgcctcagtctccctaggagccgggattacaagcacaccatcacgcccgactaatttttgtatttttagtag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482636 183 + 3907144 tttc-------ttttttttttttttgagacggagcctcgctctgtggcccaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcccaggttcaagtgattcgcctgcctcagtctccctaggagctgggattacaagcgcgccaccatgcccgactaatttttgtatttttagtag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21496165 173 - 44557958 tttc----------------tttttgggatggagtctcgctctatggcccaggctggattacagtggcccaatctcagctcactacaacctccgcctcccaggttcgagcaattctcctgattca-cctccctagtagctgagattataaacaaatgaccatgcctggctaatttttgtatttttagtag i calJac3.chr20 C 0 I 1763 s aotNan1.NW_018500622v1 9246868 173 - 10531588 tttc----------------tttttgggacagagtctcactctgtggccccggctggattacaatggcccagtctcagctcactgcaacctccccctcccaggttcaagcgattctcctgattca-ccttcctagtagctgagattataaacgaacgaccgtgcccggctaatttttgtatttttagtag i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13666911 124 + 13852661 ----------------TCtttttttgagacagagcctccctttgtcacacttgatagagtgcagtgctgtcatat---ctcacagcaactttaaactcttgaccgtaagagatcctctttcctcagttttcc-----------------------------------------------atttttagtag i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=625085.000000 s hg38.chr16_GL383557v1_alt 13865 114 + 89672 ggatgaggtttccccatattggccatgctagtctggaactcctgacctcaggggatccgcccacctcagcctcccaaagtgctgggattacaggcgtgacccgctgtacccggc s panTro5.chr16 21439846 114 - 81586097 ggatgaggtttccccatattggccatgctagtctggaactcctgacctcaggggatccgcccacctcagcctcccaaagtgctgggattacaggcgtgacccgctgtgcccggc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739624 114 + 3010529 ggatgaggtttccccatattggccatgctagtctggaactcctgacctcaggggatccgcccacctcagcctcccaaagtgctgggattacaggcgtgacccgctgtgcccggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847672 114 + 163208435 ggatgaggtttcaccatgttggccgggctagtctggaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgacccactgtgcccggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326158 108 - 74971481 ggatgaggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccgcccatgtcagcctcccaaagtgctgggattatggtgg------gctgtgcccggc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035459 108 - 78541002 ggatgaggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccgcccatgtcagcctcccaaagtgctgggattatggtgg------gctgtgcccggc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428880 108 + 26466322 ggatgaggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccgcccatgtcagcctcccaaagtgctgggattacggtgg------gctgtgcccggc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20756185 108 + 43916225 ggatgaggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccgcccatgtcagcctcccaaagtgctgggattacggtgg------gctgtgcccggc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58193133 108 + 75399963 ggatgaggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccgcccatgtcagcctcccaaagtgctgggattacggtgg------gctgtgcccggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742074 108 - 7209941 ggatgaggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccacccatgtcagcctcccaaagtgctgggattacggtgg------gctgtgcccggc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482819 108 + 3907144 ggatgaggtttcactatgttggccaggctagtctgaaactcctgacctcaggtgatctgcccatgtcagcctcccaaagtgctgggattacagtgg------gctgtgcccggc i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9247041 113 - 10531588 ggatggggtttcaccatgttggccaggctagtctggaactcctgacctcaggtgatccacccaccttagcctccaaaagtgctgagattacaggtgtgagccaccactccc-gc i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13667035 112 + 13852661 agacaaggtctaat--tcttgctcaggttggtttccaacttgtaacctgaaacaatctacctgactcagcctcccagagtgctaggattacgggtgtaagccaccacacatggc i otoGar3.GL873566 C 0 I 1843 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21496338 1763 - 44557958 I a score=101937.000000 s hg38.chr16_GL383557v1_alt 13979 18 + 89672 cTACAAAATATATTTCTT s panTro5.chr16 21439960 18 - 81586097 cTACAAAATATATTTCTT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739738 18 + 3010529 cTACTAAATATATTTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847786 18 + 163208435 ctacaaaatatatttctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326266 18 - 74971481 ctacaaaacatatttctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035567 18 - 78541002 ctacaaaacatatttctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14428988 18 + 26466322 ctacaaaacatatttctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20756293 18 + 43916225 ctacaaaacatatttctt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58193241 18 + 75399963 ctacaaaacatatttctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742182 18 - 7209941 ctacaaaacgtatttctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482927 18 + 3907144 ctacaaaatatatttctt i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9247154 18 - 10531588 ctacaaaatatatttctt i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21496338 1763 - 44557958 I e otoGar3.GL873566 13667147 1843 + 13852661 I a score=97494.000000 s hg38.chr16_GL383557v1_alt 13997 14 + 89672 AAAAATTAgccagg s panTro5.chr16 21439978 14 - 81586097 AAAAATTAgccagg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739756 14 + 3010529 AAAAATTAgccagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847804 14 + 163208435 aaaaattagccagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326284 14 - 74971481 aaaaattagccagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035585 14 - 78541002 aaaaattagccagg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429006 14 + 26466322 aaaaattagccagg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20756311 14 + 43916225 aaaaattagccagg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58193259 14 + 75399963 aaaaattagccagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742200 14 - 7209941 aaaaattagccagg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482945 14 + 3907144 aaaaattagccagg i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9247172 14 - 10531588 aaaaatcagccagg i aotNan1.NW_018500622v1 C 0 I 1342 s otoGar3.GL873566 13668990 14 + 13852661 aaaaCCTAGCCAGG i otoGar3.GL873566 I 1843 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21496338 1763 - 44557958 I a score=2446928.000000 s hg38.chr16_GL383557v1_alt 14011 513 + 89672 --------cagggtggcacatgcctgtagtttcagctacctgggaggctgaggtgggaggatccctagagcccaggagttccaagc------------tgatcacactactgcactccagcctgggcaacagagcaagagcctgtctctaaaaacataatat-ggccgggcgcggtggctcatgcctgtaatcctagcactctgggaggccgaggcaggtggattgcctga-tatcaggagttcaagaacagcctgggcaacatggtgaaaccccgtctctattaaaatacaaaaaattatccaggcatggcagcacgtgcctgtaat---------cccagctacttgggaggccgagacaggagaatagcttgaacctgggaggtgtaggttacagtgagcc----------aagactgcgccactgcactccagc--ctgggcaacagaacgatattccatctcaaaaaacca-----------aaccaaaacaaaaaaccgtaatacatttttttacatttctctactaaaaat-----acaaagttagccaggcatggtgg-tgtgca s panTro5.chr16 21439992 513 - 81586097 --------cagggtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatccctagagcccaggagttccaagc------------tgatcacactactgcactccagcctgggcaacagagcaagagcctgtctctaaaaacataatat-ggccgggcgcggtggctcatgcctgtaatcctagcactttgggaggccgaggcaggtggattgcctga-tatcaggagttcgagaccagcctgggcaacatggtgaaaccccgtctctattaaaatacaaaaaattatccaggcatggcagcacgtgcctgtaat---------cccagctacttgggaggccgagacaggagaatagcttgaacctgggaggtgtaggttacagtgagcc----------aagactgcgccactaaactccagc--ctgggcaacagaacgatactccatctcaaaaaacca-----------aaccaaaacaaaaaaccataatacatttttttacatttctctactaaaaat-----acaaagttagccaggcatggtgg-tgtgca i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 739770 513 + 3010529 --------cagggtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatccctagagcccaggagttccaagc------------tgatcacactactgcactccagcctgggcaacagagcaagagcctgtctctaaaaacataatat-ggccgggcgcggtggctcatgcctgtaatcctagcactttgggaggccgaggcaggtggattgcctga-tatcaggagttcgagaccagcctgggcaacatggtgaaaccccgtctctattaaaatacaaaaaattatccaggcatggcagcacgtgcctgtaat---------cccagctacttgggaggccgagacaggagaatagcttgaacctgggaggtgtaggttacagtgagcc----------aagactgcgccactgcactccagc--ctgggcaacagaacgatactccatctcaaaaaacca-----------aaccaaaacaaaaaacgataatacatttttttacatttctctactaaaaat-----acaaagttagccaggcatggtgg-tgtgca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53847818 526 + 163208435 --------cagggtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatccctagagcccaggagttccaagc------------tgatcacaccactgcactccagcctgggcaacagagtaagagcctgtctctaaaaaCATAATAT-ggccgggtgcggtggatcacatctgtaatcctagcactttgggaggccgagtcaggtggattgcctga-tatcaggagtttgagaccagcctgggcaacatggtgaaaccctgtctctattaaaatacaaaaacttagccaggcatggtggcatgcgcctataatcc-------cccagctacttgggaggctgagacaggagaatcgtttgaacctgggaggcgtaggttgcagtgagcc----------aagattgcgccactgcactccagc--ctgggcaacagagcgatactccatctcaaaaaaccaaaaccaaaaccaaacaaaacaaaaaaCCGTAATACATTTTTTTACATTtctctactaaaaat-----acgaagttagccaggcgtggtgg-tatgca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326298 536 - 74971481 --------tatagtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatctctagagcccaggagttccaagctgcagtgagttatgaccacaccactgcactccagcacgggcaacagagcaagagcctgtctccaaaaaCATAATAC-Agtcggatgtggtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggatcgcctga-tatcaggggttcgagaccagcctgggcaacatggtgaaactctgtctctactaaaatacaaaaaattagcagggcatggcagcgtgcgcctgtaat---------cccagctactcgggagcctgagacaggagaatcgcttgaacatgggaggcacagtttgcagtgagcc----------aagattgcacaactgtactccagc--ctgggaaacagagctatactccatctcaaaaaaCCAAAACCCAAACCAAACCAAACAAAAAACCATAATACATGTTTTTACACTtctctgctaaaaat-----acgaagttagccaggcatggtgg-tgtgca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21035599 536 - 78541002 --------tatagtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatctctagagcccaggagttccaagctgcagtgagttatgaccacaccactgcactccagcacgggcaacagagcaagagcctgtctccaaaaaCATAATAC-Agtcggatgtggtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggatcgcctga-tatcaggggttcgagaccagcctgggcaacatggtgaaactctgtctctactaaaacacaaaaaattagcagggcatggcagcgtgcgcctgtaat---------cccagctactcgggagcctgagacaggagaatcgcttgaacatgggaggcacagtttgcagtgagcc----------aagattgcacaactgtactccagc--ctgggaaacagagcgatactccatctcaaaaaaCCAAAACCCAAACCAAACCAAACAAAAAACCATAATACATGTTTTTACACTtctctgctaaaaat-----acgaagttagccaggcatggtgg-tgtgca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429020 536 + 26466322 --------tatagtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatctctagagcccaggagttccaagctgcagtgagttatgaccacaccactgcactccagcacgggcaacagagcaagagcctgtctccaaaaaCATAATAC-Agtcggatgtggtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggatcgcctga-tatcaggggttcgagaccagcctgggcaacatggtgaaactctgtctctactaaaacacaaaaaattagcagggcatggcagcgtgcgcctgtaat---------cccagctactcgggagcctgagacaggagaatcgcttgaacatgggaggcacagtttgcagtgagcc----------aagattgcacaactgtactccagc--ctgggaaacagagcgatactccatctcaaaaaaCCAAAACCCAAACCAAACCAAACAAAAAACCATAATACATGTTTTTACACTtctctgctaaaaat-----acgaagttagccaggcatggtgg-tgtgca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20756325 536 + 43916225 --------tatagtggcacatgcctgtagttacagctacttgggaggctgaggtgggaggatccctagagcccaggagttccaagctgcggtgagttatgaccacaccactgcactccagcatgggcaacagagcaagagcctgtctccaaaaaCATAATAC-Agtcggatgtggtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggatcgcctga-tatcaggggttcgagaccagcctgggcaacatggtgaaactctgtctctactaaaacacaaaaaattagcagggcatggcggcgtgcgcctgtaat---------cccagctactcgggagcctgagacaggagaatcgcttgaacatgggaggcacagtttgcagagagcc----------aagattgcacaactgtactccagc--ctgggaaacacagcgatactccatctcaaaaaaCCAAAACCCAAACCAAACCAAACAAAAAACCATAATACATGTTTTTACACTtctctgctaaaaat-----atgaagttagccagacatggtgg-tgtgca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58193273 536 + 75399963 --------tatagtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatccctagagcccaagagttccaagctgcagtgagttatgaccacaccactgcactccagcacgggcaacagagcaagagcctgtctccagaaaCATAATAC-AGTTggatgtggtggctcatgcctgtaatcctagcactttgggaggccgaggcaggtggatcgcctga-tatcaggggttcgagaccagcctgggcaacatggtgaaactctgtctctattaaaacacaaaaaattagcagggcatggcagcgtgcgcctgtaat---------cccagctactcgggagcctgagacaggagaatcgcttgaacatgggaggcatagtttgcagtgagcc----------aagattgcacaactgtactccagc--ctgggaaacagagcgatactccatctcaaaaaaCCAAAACCCAAACCAAACCAAACAAAAAACCATAATACATGTTTTTACACTtctctgctaaaaat-----acgaagttagccagacatggtgg-tgtgca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742214 536 - 7209941 --------tatagtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatccctagagcccaggagttccaagctgcagtgagttatgaccacaccactgcactccagcacgggcaacagagcaagagcctgtctccaaaaaCATAATAC-Agtcggatgtggtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggatcgcctga-tatcaggggttcgagaccagcctgggcaacatggtgaaactctgtctctactaaaacacaaaaaattagcagggcatggtggcgtgcgcctgtaat---------cccagctactcgggagcctgagacaggagaatcacttgaacatgggaggcacagtttgcagtgagcc----------aagattgcacaactgtactccagc--ctgggaaacagagcgatactctatctcaaaaaaCCAAAACCCAAACCAAACCAAACAAAAAAACATAATATATGTTTTTACACTtctctgctaaaaat-----atgaagttagccaggcatggtgg-tgtgca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 482959 537 + 3907144 --------tatagtggcacatgcctgtagttccagctacttgggaggctgaggtgggaggatccctagagcccaggagtcccaagctgcagtgagttatgaccacaccactgcactacagcatgggcaacagagcaagagcctgtctccaaaaaCATAATAC-Agtcggatgcggtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggattgcctgattatcaggggttcaagaccagcctgggcaacacggtgaaactctgtctctactaaaatacaaaaaattagcagggcatggcggcgtgcgcctgtaat---------cccagctagtcgggagcctgagacaggagaatcacttgaacatggaaggcataggttgcagtgagcc----------aagattgcacgactgtactccagc--ctgggaaacagagcaataatccacttcaaaaGaccaaaacccaaaccaaacaaaaccaaaaaccataaTACATGTTTTTACACTtctctactaaaaat-----acaaagttagccaggcatggtgg-tgtgta i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13669004 464 + 13852661 TGTGCAAgtgtggtgacttgcacttgcagtcctagctactcagtaggct-------gaggatcacttgagcccaggaatttaag-------------------------------ttcaacctgggcaacagagcaagaccctgcctctaaaaaaataaaatgggccaggtatggtggctcacacttgtaatcttagcact--------ccagagCAGGTG----TCCTCA-AATTGCG-------GCCCAGCTAGGACA-----------------TTCATCCAGCCCACAGGTGTTT---------TTGCCGCCACTGCCTGTCCTACTTAGCAGCCAAATCGTCCTGGGGCct---acagtccagccctccaacggtctgagggacag--tgaactggccccctgtttaaaaagtttgaggacctctgCTCTAgaggctgagttg-ggtggaatgcttgagctcaggagttgcagaccagcctgaaaaagagcaagaccctg-------------------tctctactaaaaatagaaaaaaaaaatagctgggtgtcatggttgggca i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9247186 1342 - 10531588 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e panPan2.chr16 21506562 288 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21496338 1763 - 44557958 I a score=844056.000000 s hg38.chr16_GL383557v1_alt 14524 141 + 89672 cctgtaatcca-actacttgggagggtgaggcaggagaattgcttgaacccaggaggcgga--tggtggtgagctgagattgcgccattgcactccagcctgggcaacaaaagcaaaactccgtcta------aaaaaaaaaaaaaaaaa s panTro5.chr16 21440505 141 - 81586097 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcaga--tggtggtgagctgagattgcgccattgcactccagcctgggcaacaaaagcaaaactccgtcta------aaaaaaaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506850 134 - 90481686 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcgga--tggtggtgagctgagattgcgccattgcactccagcctgggcaacaaaagcaaaactccgtcca------aaaaaaaaaa------- i panPan2.chr16 M 288 C 0 s gorGor5.CYUI01000018v1 740283 138 + 3010529 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcgga--tggtggtgagctgagattgcgccattgcactccagcctgggcaacaaaagcaaaactccatcta------aaaaaaaaaaaaaa--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848344 143 + 163208435 cctgtaatcca-actacttgggaggctgaggcagaagaattgcttgaaaccaggaggcggaggtggcagtgagccgagactgcgccattgcactccagcctgggcaacaaaagcaaaactccgtctt------aaaaaaaaaaaaTTAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326834 143 - 74971481 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtggcagtgagccgagattgcgccattgcactccagcctgggcaacaaaagcaaaactttgtcta------aaaaataaaaataaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036135 143 - 78541002 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtggcagtgagccgagattgcgccattgcactccagcctgggcaacaaaagcaaaactttgtcta------aaaaataaaaataaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429556 143 + 26466322 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtggcagtgagccgagattgcgccattgcactccagcctgggcaacaaaagcaaaactttgtcta------aaaaataaaaataaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20756861 143 + 43916225 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtggcagtgagccgacattgcgccattgcactccagcctgggcaacaaaagcaaaactttgtcta------aaaaataaaaattaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58193809 149 + 75399963 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggtggaggtggcagtgagccgagattgcgccattgcactccagcctgggcaacaaaagcaaaactttgtctaaaaaataaaaataaaaataaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742750 143 - 7209941 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtggcagtgagctgagattgagccattgcactccagcctgggcaacaaaagcaaaactttgtcta------aaaaataaaaataaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483496 149 + 3907144 cctgtaatcca-actacttgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtggcagtgaaccgagattgcgccattgcactccagcctgggcaacaaaagcaaaactctgtctaaaacataaaaataaaaataaaaa i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13669468 144 + 13852661 cctgtagtccctgctacttgggaggctgaagcacaaggatggcttgagcacaggagttggagattgctgtgagctatgacaatgccatagcactcaaacccagcacgacagagtgaaactcaatctc------aaaaaattaaattaaat i otoGar3.GL873566 C 0 I 4 e canFam3.chr5 80430145 506 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9247186 1342 - 10531588 I e cebCap1.NW_016107433v1 3283052 2065 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21496338 1763 - 44557958 I a score=85676.000000 s hg38.chr16_GL383557v1_alt 14665 28 + 89672 -----aaaaaattaaataa-------caaaaa--------tcagaatg s panTro5.chr16 21440646 25 - 81586097 -----aaa---TTAAATAA-------CAAAAA--------TCAGAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21506984 22 - 90481686 -----------ttaaataa-------caaaaa--------TCAGAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740421 22 + 3010529 -----------ttaaataa-------caaaaa--------TCAGAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848487 22 + 163208435 -----------TTAAATAA-------CAAAAA--------TCAGAATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326977 15 - 74971481 -----a-----ttaaataa-------caaaaa---------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036278 15 - 78541002 -----a-----ttaaataa-------caaaaa---------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429699 15 + 26466322 -----a-----ttaaataa-------caaaaa---------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757004 23 + 43916225 -----a-----ttaaataa-------caaaaaTCAGAATG-------- i cerAty1.NW_011999143v1 C 0 I 303 s chlSab2.chr5 58193958 15 + 75399963 -----a-----TTAAATAA-------CAAAAA---------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742893 15 - 7209941 -----a-----ttaaataa-------caaaaa---------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483645 15 + 3907144 -----a-----TTAAATAA-------CAAAAA---------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498101 15 - 44557958 -----A-----TTAACTAA-------CAAAAA---------------- i calJac3.chr20 I 1763 C 0 s cebCap1.NW_016107433v1 3285117 15 - 5917169 -----A-----TTAAATAA-------CAAAAA---------------- i cebCap1.NW_016107433v1 I 2065 C 0 s aotNan1.NW_018500622v1 9248528 15 - 10531588 -----A-----TTAAATAA-------CAAAAA---------------- i aotNan1.NW_018500622v1 I 1342 C 0 s otoGar3.GL873566 13669616 22 + 13852661 -----a-----ttaaataatttttttCAAAAC---------------- i otoGar3.GL873566 I 4 I 8 s canFam3.chr5 80430651 28 + 88915250 aaaaaa-----ttaaataa-------ttaaaa--------tGAAAATG i canFam3.chr5 I 506 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=500107.000000 s hg38.chr16_GL383557v1_alt 14693 55 + 89672 tc-------------agaatgtcaaacttaccaaa-------------------a--tgaagaaattacaaTAATGGGG-ATCTCTAAGA s panTro5.chr16 21440671 55 - 81586097 TC-------------CGAATGTCAAACTTACCAAA-------------------A--TGAAGAAATTACAATAATGGGG-ATCTCTAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507006 55 - 90481686 TC-------------AGAATGTCAAACTTACCAAA-------------------A--TGAAGAAATTACAATAATGGGG-ATCTCTAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740443 55 + 3010529 TC-------------AGAATGTCAAACTTACCAAA-------------------A--TGAAGAAATTACAATAATGGGG-ATCTCTAAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848509 55 + 163208435 TC-------------AGAATGTCAAACTTACCAAA-------------------A--TGAAGAAATTACAATAATGGGG-ATCTCTAAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21326992 55 - 74971481 TC-------------AGAATGTCAAACTTACCAGA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036293 55 - 78541002 TC-------------AGAATGTCAAACTTACCAGA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429714 55 + 26466322 TC-------------AGAATGTCAAACTTACCAGA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757330 56 + 43916225 TC-------------AGAATGTCAAACTTACCAAA-------------------A--GGAAGAAATTACAAGAATGGGGAATCTCTAAGA i cerAty1.NW_011999143v1 I 303 C 0 s chlSab2.chr5 58193973 55 + 75399963 TC-------------AGAATGTCAAACTTACCAAA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742908 55 - 7209941 TC-------------AAAATGTCAAACTTACCAAA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483660 55 + 3907144 TC-------------AGAATGTCAAACTTACCAAA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498116 55 - 44557958 TC-------------AAAACGTCAAACTTACCAAA-------------------A--GGAAGAAATTACAAGAATGGGG-ATCTCTAAGA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285132 55 - 5917169 TC-------------AAAATGTCAAACTTACCAAA-------------------A--TGAAGAAATTACAAGAACGGGG-ATCTCTAAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248543 55 - 10531588 TC-------------AAAATGTCAAACTTACCAAA-------------------A--TGAAGAAATTACAAGAATGGGG-ATCTCTAAAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13669646 87 + 13852661 TCACTATTACAGTGGAAACTAATAAATCTGTCAAATAATTAGTTTTACCTCTTTA--GGAATAAAATACACTAGTTCAC-TTCTTAAGGA i otoGar3.GL873566 I 8 I 94 s canFam3.chr5 80430679 46 + 88915250 ---------------------TCAAATTTACCAAA-------------------AACTGAGGAAGTTA---GAACAGAG-ATTTCCAGAT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=389465.000000 s hg38.chr16_GL383557v1_alt 14748 42 + 89672 TTGTGCCATGTCTAC-ACTATCTTGCTAAACTTTTAGCATTTT s panTro5.chr16 21440726 42 - 81586097 TTGTGCCATGTCTAC-ACTATCTTGCTAAACTTTTAGCATTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507061 42 - 90481686 TTGTGCCATGTCTAC-ACTATCTTGCTAAACTTTTAGCATTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740498 42 + 3010529 TTGTGCCATGTCTAC-ACTATCTTGCTAAACTTTTAGCATTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848564 42 + 163208435 TTGTGCCATGTCTAC-ACTACTTTGCTAAACTTTTAGCATTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327047 42 - 74971481 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036348 42 - 78541002 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429769 42 + 26466322 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757386 42 + 43916225 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194028 42 + 75399963 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6742963 42 - 7209941 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483715 42 + 3907144 TTGTGCCATGTCCAC-ACTATCTTGCTCAACTTTTAGCATTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498171 42 - 44557958 TTGTGTCATGTGTAA-GCTACCTTGCTAAATTTTCAGCATTTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285187 42 - 5917169 TTGTGTCATGTGTAA-GCTATCTTGCTAAACTTTCGGCATTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248598 42 - 10531588 TTGTGTCATGTGTAA-GCTATCTTGCTAAACTTTCAGCATTTT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80430725 43 + 88915250 TTTTGCTGTGTACATAACTATCTTGCTAAACTTTTAATGTTTT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13669733 94 + 13852661 I a score=13600.000000 s hg38.chr16_GL383557v1_alt 14790 1 + 89672 G s panTro5.chr16 21440768 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507103 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740540 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848606 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327089 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036390 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429811 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757428 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194070 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743005 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483757 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498213 1 - 44557958 G i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285229 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248640 1 - 10531588 G i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 184187 1 - 13852661 G i otoGar3.GL873566 n 94 C 0 s canFam3.chr5 80430768 1 + 88915250 G i canFam3.chr5 C 0 I 1018 e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=528968.000000 s hg38.chr16_GL383557v1_alt 14791 61 + 89672 AATGGGAACTTTGT-GAGTATACTACAAGATCTATATAGTTTAAACATCTTGAGGTGGGGGA s panTro5.chr16 21440769 62 - 81586097 AATGGGAACTTTGTTGAGTACACTACAAGATCTATATAGTTTAAACATCTTGAGGTGGGGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507104 62 - 90481686 AATGGGAACTTTGTTGAGTACACTACAAGATCTATATAGTTTAAACATCTTGAGGTGGGGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740541 61 + 3010529 AATGGGAACTTTGT-GAGTACACTACAAGATCTATATAGTTTAAACACCTTGAGGTGGGGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848607 61 + 163208435 AATGGGAACTTTGT-GAGTACACTACAAGATCTATATAGTTTAAACATCTTGGGGTGGGGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327090 61 - 74971481 AATGGGAACTTTGA-GCATATACTACCAGATCTACATAGTTTAAGCATCTCGGGGTGGGGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036391 61 - 78541002 AATGGGAACTTTGA-GCATATACTACCAGATCTACATAGTTTAAGCATCTCGGGGTGGGGGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429812 61 + 26466322 AATGGGAACTTTGA-GCATATACTACCAGATCTACATAGTTTAAGCATCTCGGGGTGGGGGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757429 61 + 43916225 AATGGGAACTTTGA-GCATATACTACCAGATCTACATAGTTTAAGCATCTCGGGGTGGGGGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194071 61 + 75399963 AATGGGAACTTTGA-GCATATACTACCAGATCTACATAGTTTAAGCATCTCCGGGTGGGGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743006 61 - 7209941 AATGGGAACTTTGA-GCATATACTACCAGATCTACATAGTTTAAGCATCTCGGTGTGGGGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483758 61 + 3907144 AATGGGAACTTTGA-GAGTATACTACCAGATCTACATAGTTTAAACATCTTGGGGTGGGGGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498214 61 - 44557958 AACGGGAGCTTTGG-GAGTACACTACAGTATCTGTATAGTTTAAACATCTTTGGGTGGGGGA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285230 61 - 5917169 AACGGGAGCTTTGT-GGGTACACTACAACATCTGTATAGTTTAAACATCTTTGGGTGGGGGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248641 61 - 10531588 AACGGGAGCTTTGT-GAGTACACTACAAGATCCGTATAGTTTAAACATCTTTGGGTGGGGTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 184188 61 - 13852661 GATGGGAACCTTGT-GGGAAAACTACAAGATCTGTTTTGTTTACACATCTTGGGGTGAGGGA i otoGar3.GL873566 C 0 n 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=30555.000000 s hg38.chr16_GL383557v1_alt 14852 3 + 89672 CTC s panTro5.chr16 21440831 3 - 81586097 CTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507166 3 - 90481686 CTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740602 3 + 3010529 CTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848668 3 + 163208435 CTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327151 3 - 74971481 CTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036452 3 - 78541002 CTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429873 3 + 26466322 CTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757490 3 + 43916225 CTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194132 3 + 75399963 CTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743067 3 - 7209941 CTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483819 3 + 3907144 CTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498275 3 - 44557958 CTC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285291 3 - 5917169 CTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248702 3 - 10531588 CTC i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 184249 0 - 13852661 I a score=220936.000000 s hg38.chr16_GL383557v1_alt 14855 25 + 89672 ATTCGGTTATATAAGAAAAAGGTAT s panTro5.chr16 21440834 25 - 81586097 ATTCGGTTATGTAAGAAAAAGGTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507169 25 - 90481686 ATTCGGTTATGTAAGAAAAAGGTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740605 25 + 3010529 ATTCTGTTATGTAAGAAAAACGTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848671 25 + 163208435 ATTCTGTTATGTAAGAAAAAGATGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327154 25 - 74971481 ATTCTGTTATGTAAGAAAAAGATAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036455 25 - 78541002 ATTCTGTTATGTAAGAAAAAGATAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429876 25 + 26466322 ATTCTGTTATGTAAGAAAAAGATAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757493 25 + 43916225 ATTCTGTTATGTAAGAAAAAGATAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194135 25 + 75399963 ATTCTGTTATGTAAGAAAAAGATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743070 25 - 7209941 ATTCTGTTATGTAAGAAAAAGATAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483822 25 + 3907144 ATTCTGTTATGTAAGAAAAAGATAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498278 25 - 44557958 ACTCCATTATGTAAGAAAAAGATAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285294 25 - 5917169 ACTCCATTATGTAAGAAAAAGATAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248705 25 - 10531588 ACTCCATTATGTAAGAAAAAGATAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13669827 25 + 13852661 ATTCTATTCTGTAGAAAAAAGATTA i otoGar3.GL873566 I 94 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54901963 1313 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2913422 1322 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=600814.000000 s hg38.chr16_GL383557v1_alt 14880 58 + 89672 CTTTGTACTATATCTCTCCTTCTAAATTAGATA--TA---AGTTTAAACTCAGCATGAAGAAT s panTro5.chr16 21440859 58 - 81586097 CTTTGTACTGTATCTCTCCTTCTAAATTAGATA--TA---AGTTTAAACTCAGCATGAAGAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507194 58 - 90481686 CTTTGTACTATATCTCTCCTTCTAAATTAGATA--TA---AGTTTAAACTCAGCATGAAGAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740630 58 + 3010529 CTTTGTACTATATCTCTCCTTCTAAATTAGATA--TA---AGTTTAAACTCAGCATGAAGAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53848696 58 + 163208435 CTTTGTACTGTATCTCTCCTTCTAAATTAGATA--TA---AGTTTAAACGCAGCATGAAGAAT i nomLeu3.chr2 C 0 I 311 s rheMac8.chr20 21327179 58 - 74971481 CTTTGTACTATGTCTCCCCTTCTAAATTAGATA--TA---TGTTTAAACTCAGCATGAAGAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036480 58 - 78541002 CTTTGTACTATGTCTCCCCTTCTAAATTAGATA--TA---TGTTTAAACTCAGCATGAAGAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429901 58 + 26466322 CTTTGTACTATGTCTCCCCTTCTAAATTAGATA--TA---TGTTTAAACTCAGCATGAAGAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757518 58 + 43916225 CTTTGTACTATGTCTCCCCTTCTAAATTAGATA--TA---TGTTTAAACTCAGCATGAAGAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194160 60 + 75399963 CTTTGTACTATGTCTCTCCTTCTAAATTAGATATCTA---TGTTTAAACTCAGCATGAAGAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743095 58 - 7209941 CTTTGTACTATGTCTCCCCTTCTAAATTAGATA--TA---TGTTTAAACTCAGCATGAAGAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483847 58 + 3907144 CTTTGTACTATGTCTCTCCTTCTAAATTAGATA--TA---TGTTTAAACTCAACCTGAAGAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498303 54 - 44557958 CTTTGTACAATATCTTTC---CTAAATT-TAGA--TA---AGTTTAAACTCAGCATGAAGAAC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285319 55 - 5917169 CTTTGTACTATATCTTTC---CTAAATTAAAGA--TA---AATTTAAACTCAGCATGAAGAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9248730 58 - 10531588 CTTTGTACTATATCTTTC---CTAAATTAGAGA--TAAGTAGTTTAAACTCAGCATGAAGAAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54903276 56 + 72247402 CTTTGTACTGTATCTCTTCTTCTAAAATAGAGG--TA---AGTTTAAA--CATCATGAAGAAC i micMur3.chr20 I 1313 C 0 s proCoq1.NW_012152729v1 2914744 56 + 9850184 CTTTGTACTGTATCTCTTCTTCTAAAATAGAGA--TA---AGTTTAAA--TAGCATGAAGAAC i proCoq1.NW_012152729v1 I 1322 C 0 s otoGar3.GL873566 13669852 56 + 13852661 ATTTGTACTATATCTGCCCTTAAAAAACAGAGG--TA---AGTTCTAA--CAGCATGAAAAAC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=133400.000000 s hg38.chr16_GL383557v1_alt 14938 11 + 89672 -TAAGGAGCAAA s panTro5.chr16 21440917 11 - 81586097 -TAAGGAGCAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507252 11 - 90481686 -TAAGGAGCAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740688 11 + 3010529 -TAAGGAGCAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849065 11 + 163208435 -TAAGGAGCAAA i nomLeu3.chr2 I 311 C 0 s rheMac8.chr20 21327237 11 - 74971481 -TAAGGGGCAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036538 11 - 78541002 -TAAGGGGCAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429959 11 + 26466322 -TAAGGGGCAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757576 11 + 43916225 -TAAGGGGCAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194220 11 + 75399963 -TAAGGGGCAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743153 11 - 7209941 -TAAGGGGCAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483905 11 + 3907144 -TAAGGAGCAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498357 11 - 44557958 -TAAGGAGCAAA i calJac3.chr20 C 0 I 1 s cebCap1.NW_016107433v1 3285374 11 - 5917169 -TAAGGAGCAAA i cebCap1.NW_016107433v1 C 0 I 10 s aotNan1.NW_018500622v1 9248788 11 - 10531588 -TAAGGAGCAAA i aotNan1.NW_018500622v1 C 0 I 10 s micMur3.chr20 54903332 12 + 72247402 TGACGGAGCAAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2914800 12 + 9850184 TGAAGGAGCAAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13669908 12 + 13852661 TGAAGGTGCAAA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=67662.000000 s hg38.chr16_GL383557v1_alt 14949 7 + 89672 TCTCCTA s panTro5.chr16 21440928 7 - 81586097 TCTCCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507263 7 - 90481686 TCTCCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740699 7 + 3010529 TCTCCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849076 7 + 163208435 TTTCCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327248 7 - 74971481 TTTCCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036549 7 - 78541002 TTTCCTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429970 7 + 26466322 TTTCCTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757587 7 + 43916225 TTTCCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194231 7 + 75399963 TTTCCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743164 7 - 7209941 TTTCCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483916 7 + 3907144 TTTCCTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498369 7 - 44557958 TTTCCTA i calJac3.chr20 I 1 C 0 s micMur3.chr20 54903344 7 + 72247402 TTTTCTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2914812 7 + 9850184 TTTTCTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13669920 7 + 13852661 TTTTCTA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=703524.000000 s hg38.chr16_GL383557v1_alt 14956 94 + 89672 ACTCATTCAACAAAAACATA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATATAAAATATAGCTACTAAAATATGAGCTACTGT s panTro5.chr16 21440935 94 - 81586097 AGTCATTCAACAAAAACATA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATATAAAATATAGCTACTAAAATATGAGCTACTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507270 92 - 90481686 AGTCATTCAACAAAAACATA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAAC--ATAAAATATAGCTACTAAAATATGAGCTACTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740706 94 + 3010529 AGTCATTCAACAAAAACATA-TCTAGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATATAAAATATAGCTACTAAAATATGAGCTACTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849083 94 + 163208435 AGTCATTCAACAAAAACATA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATATTAAATATAGCTATTAAAATATGAGCTACTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327255 94 - 74971481 AGTCATTCAACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATCTTAAATATAGCTACTAAAATACAAGCTACTGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036556 94 - 78541002 AGTCATTCAACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATCTTAAATATAGCTACTAAAATACAAGCTACTGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14429977 94 + 26466322 AGTCATTCAACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATCTTAAATATAGCTACTAAAATATAAGCTACTGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757594 94 + 43916225 AGTCATTCAACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATCTTAAATATAGCTACTAAAATATAAGCTACTGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194238 94 + 75399963 AGTCATTCAACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATATTAAATATAGCTACTAAAATATAAGCTACTGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743171 94 - 7209941 AGTCATTCGACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAAAGTAGACTAAAAACATCTTAAATATAGCTACTAAAATATAAGCTACTGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 483923 89 + 3907144 AGTTATGCAACAAAAACACA-TCTTGAGCAAAATCATGTGCATTAA-----ACTAAAAACATATTAAATACAGCTACTAAAATATAAGCTACTGT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54903351 94 + 72247402 AGTCACTCAACAAAAATGGATTCTTGAGCAAAA-CATGTCCATTAAAGCAGAATAAAAACATAATAAATATAGCCACTAAAATATGAGCTGCTAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2914819 93 + 9850184 AGTCACTCAACAAAAATGTATTCTTGAGCAAAA-CGTGTCCATTAAAGTAGAATAAAAACAAAATAAATATAGCTACTAAAATACGAGCTGCTG- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13669927 77 + 13852661 AGTTACT---AAAAAATGTATTTTTGAGA---------------AAAGTAGACTAAAAACATAAAAAATATAGCTATTGAAATATGAGCTATTGT i otoGar3.GL873566 C 0 I 225 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498376 0 - 44557958 C a score=417518.000000 s hg38.chr16_GL383557v1_alt 15050 52 + 89672 GATAGCTACAAAAACTGTTTAAAGTATTTCCACCAATGGCC--AGATTTCAAAC s panTro5.chr16 21441029 52 - 81586097 GATAGCTACAAAAACTGTTTAAAGTATTTCCACCAATGGCC--AGATTTCAAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507362 52 - 90481686 GATAGCTACAAAAACTGTTTAAAGTATTTCCACCAATGGCC--AGATTTCAAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740800 52 + 3010529 GATAGCTACAAAAACTGTTTAAAGTATTTCCACCAATGGCC--AGATTTCAAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849177 52 + 163208435 GATAGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327349 51 - 74971481 GA-AGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036650 51 - 78541002 GA-AGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430071 51 + 26466322 GA-AGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757688 51 + 43916225 GA-AGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194332 51 + 75399963 GA-AGCTACAAAAAGTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743265 51 - 7209941 GA-AGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484012 51 + 3907144 GA-AGCTACAAAAACTGTTTAAAATATTTCCACCAATGGCC--AGATTTCAAAC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54903445 54 + 72247402 GATAACTACTAAAACTGTTTAAAGTATTTCTACCAATGGCCAAAGATTTCAAac i micMur3.chr20 C 0 I 105 s proCoq1.NW_012152729v1 2914912 48 + 9850184 ------TACTAAAACTGTTTAAAGTATTTCTACCAACGGCCAAAGAtttcaaac i proCoq1.NW_012152729v1 C 0 I 108 s otoGar3.GL873566 13670229 54 + 13852661 GATAACTGCACAAACTGTTTAAGGTACTTCTCCCTATGGCCAAAGATTTCAAac i otoGar3.GL873566 I 225 I 4 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498376 0 - 44557958 C a score=271211.000000 s hg38.chr16_GL383557v1_alt 15102 53 + 89672 AAGCA-------------------------------------------------CCTCTGCAACACTGACTAATACGTAGGGGATGTTCATTCAATGTCTAC s panTro5.chr16 21441081 53 - 81586097 AAGCA-------------------------------------------------CCTCTGCAACACTGACTAATACGTAGGGGATGTTCATTCAATGTCTAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507414 53 - 90481686 AAGCA-------------------------------------------------CCTCTGCAACACTGACTAATACGTAGGGGATGTTCATTCAATGTCTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740852 53 + 3010529 AAGCA-------------------------------------------------CCTCTGCAACACTGACTAATACGTAGGGGATGTTCATTCAATGTCTAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849229 53 + 163208435 AAGCA-------------------------------------------------TCTCTGCAACACTGACTAATACGTAGGGGATGTTCATTCAATGTCTGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327400 49 - 74971481 AAGCA-------------------------------------------------CCTCTGTAAC----ACTAATACGTAGGGGACATTCATTCAATGTCTGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036701 49 - 78541002 AAGCA-------------------------------------------------CCTCTGTAAC----ACTAATACGTAGGGGACATTCATTCAATGTCTGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430122 49 + 26466322 AAGCA-------------------------------------------------CCTCTGTAAC----ACTAATACGTAGGGGACATTCATTCAATGTCTGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757739 49 + 43916225 AAGCA-------------------------------------------------CCTCTGTAAC----ACTAATACGTAGGGGACATTCATTCAATGTCTGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194383 49 + 75399963 AAGCA-------------------------------------------------CCTCTGTAAC----ACTAATACGTAGGGGACATTCACTCAATGTCTGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743316 49 - 7209941 AAGCA-------------------------------------------------TCTCTGTAAC----ACTAATACGTAGGGGACATTCATTCAATGTCTGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484063 49 + 3907144 AAGCA-------------------------------------------------CCTCTGTAAC----ACTAATACGTAGGGGACATTCATTCAATGTCTGC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13670287 101 + 13852661 aagtacactgcatgaggaaaggagtttgtgcattattccctgccatataaccagcacctacaacagtgactaacacaca-gggatcctcattaaatgtttgt i otoGar3.GL873566 I 4 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903499 105 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2914960 108 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498376 0 - 44557958 C a score=55867.000000 s hg38.chr16_GL383557v1_alt 15155 7 + 89672 TGAATTA s panTro5.chr16 21441134 7 - 81586097 TGAATTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507467 7 - 90481686 TGAATTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740905 7 + 3010529 TGAATTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849282 7 + 163208435 TGAATTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327449 7 - 74971481 TGAATTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036750 7 - 78541002 TGAATTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430171 7 + 26466322 TGAATTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757788 7 + 43916225 TGAATTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194432 7 + 75399963 TGAATTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743365 7 - 7209941 TGAATTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484112 7 + 3907144 TGAATTA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54903604 7 + 72247402 tgaattg i micMur3.chr20 I 105 C 0 s otoGar3.GL873566 13670388 7 + 13852661 tgaattg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2914960 108 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498376 0 - 44557958 C a score=422477.000000 s hg38.chr16_GL383557v1_alt 15162 49 + 89672 AATACTGGTTGAATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT s panTro5.chr16 21441141 49 - 81586097 AATACTGGTTGAATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507474 49 - 90481686 AATACTGGTTGAATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740912 49 + 3010529 AATACTGGTTGAATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849289 49 + 163208435 AATACTGGTTGAATTACCATAAAGCAGAGTATTTCAAAATAACAAATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327456 49 - 74971481 AATACTGGTTGGATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036757 49 - 78541002 AATACTGGTTGGATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430178 49 + 26466322 AATACTGGTTGGATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757795 49 + 43916225 AATACTGGTTGGATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194439 49 + 75399963 AATACTGGTTGGATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743372 49 - 7209941 AATACTGGTTGGATTACCATAAAGCAGAGTATTTCAAGATAACAAATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484119 49 + 3907144 AATACTGGTTGGATTACCATAAAGCAGAGTATCTCAAGATAACAAATTT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54903611 49 + 72247402 aatACTGACAGAATTACTATTAAGCATAATATTTCAAGATAATAAATTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2915068 49 + 9850184 aatactgactgCATTACTGTAAAGCACACTATTTCAAGATAATAAATTT i proCoq1.NW_012152729v1 I 108 C 0 s otoGar3.GL873566 13670395 49 + 13852661 aatATTGGGTGAATTACCTTAAAGCACAGTATTTCAAGATAATAAATGT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498376 0 - 44557958 C a score=20010.000000 s hg38.chr16_GL383557v1_alt 15211 2 + 89672 AA s panTro5.chr16 21441190 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507523 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740961 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849338 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327505 2 - 74971481 AA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036806 2 - 78541002 AA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430227 2 + 26466322 AA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757844 2 + 43916225 AA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194488 2 + 75399963 AA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743421 2 - 7209941 AA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484168 2 + 3907144 AA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498376 2 - 44557958 AG i calJac3.chr20 C 0 C 0 s micMur3.chr20 54903660 2 + 72247402 AA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2915117 2 + 9850184 AA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13670444 2 + 13852661 AA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9248799 10 - 10531588 I e cebCap1.NW_016107433v1 3285385 10 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=2277320.000000 s hg38.chr16_GL383557v1_alt 15213 202 + 89672 TCTGATGTCAAACTTCTATAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTAGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGATAATAATGGAATTGGTAGAAGCAGCAATACAGCAATGATAGTTCAGGCTAATTTC---AAAATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGTTGAT s panTro5.chr16 21441192 202 - 81586097 TCTGATGTCAAACTTCTATAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTAGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGATAATAATGGAATTGGTAGAAGCAGCAATACAGCAATGATAGTTCAGGCTAATTTC---AATATCTTCCCAAACAGCATAGGAAAGAGAACCTAAAAGTTGAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507525 202 - 90481686 TCTGATGTCAAACTTCTATAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTAGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGATAATAATGGAATTGGTAGAAGCAGCAATACAGCAATGATAGTTCAGGCTAATTTC---AATATCTTCCCAAACAGCATAGGAAAGAGAACCTAAAAGTTGAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 740963 202 + 3010529 TCTGATGTCAAACTTCTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTAGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGATAATAATGGAATTGGTAGAAGCAGCAATACAGCAATGATAGTTCAGGCTAATTTC---AATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGTTGAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849340 205 + 163208435 TCTGATGTAAAACTTTTAAAATACAGAGAGATGCAATGA-----TATAAC----ACTTCTAGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGATAATAATGGAATTGGTAGAAGCAATAATACAGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGTTGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327507 205 - 74971481 TCTGATGTCAGCCTTTTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGACAATAATGGAATTGGTAGAAGGAGCAATACGGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGCTGAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21036808 205 - 78541002 TCTGATGTCAGCCTTTTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGACAATAATGGAATTGGTAGAAGGAGCAATACGGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGCTGAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430229 205 + 26466322 TCTGATGTCAGCCTTTTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGACAATAATGGAATTGGTAGAAGGAGCAATACGGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGCTGAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20757846 205 + 43916225 TCTGATGTCAGCCTTTTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGACAATAATGGAATTGGTAGAAGGAGCAATACAGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAAGAGCATGGGAAAGAGAACCTAAAAACTGAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194490 205 + 75399963 TCTGATGTCAGCCTTTTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGACAATAATGGAATTGGTAGAAGGAGCAATACAGCAATGATAGTTCAGGCTAATTTCAATAATATTTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGCTGAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743423 205 - 7209941 TCTGATGTCAGCCTTTTAAAATACAGAGAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGACAATAATGGAATTGGTAGAAGGAGCAATACAGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGCTGAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484170 205 + 3907144 TCTGATGTCAGCCTTTTAAAATACAGACAGAAGCAATGA-----TATAAC----ACTTCTGGACAGAATTAAACATACCAAGCTTA-TAGTAAAAGGCATGTATACACACAGATGATAATGGAATTGGTAGAAGGAGCAATACAGCAATGATAGTTCAGGCTAATTTCAATAATATCTTCCCAAACAGCATGGGAAAGAGAACCTAAAAGCTGAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498378 208 - 44557958 TCTGATGTCAAACTTCCAAAATAGAGAGAGAAGCAATGACATGTTATAAC----ACTTCTGGAGAGAATTAAACACACCAAGCTTA-TAGTAAAAGGCACGTAT--ATACAGATAATAATGGAATAGGTAGAAGCAGCAAAACAGCAATGATGGTTCAGACTAATTTCAATAGTATCTTCCCAAACAACCTGGGAAAGAGAACCTAAAAGTTGAT i calJac3.chr20 C 0 I 4 s cebCap1.NW_016107433v1 3285395 203 - 5917169 TCTGATGTCAAACTTCAAAAATACGGAGAGAAGCAATGACATGTTATAAC----ACTTCTGGAGAGAATTAAACACACCAAGCTTA-TGGTAAAAGGCACGTAT--ATACAGATAATAATGGAATTGGTAGAAGCAGCAAAACAGCAATGATGGTTCAGACTAATTTCAATAA-----CCCCAAACAGCCTGGGAAAGAGAACCTAAAAGTTGAT i cebCap1.NW_016107433v1 I 10 I 9 s aotNan1.NW_018500622v1 9248809 208 - 10531588 TCTGATGTCAAACTTCCAAAATACAGAGAGAAGCAATGACATGTTATAAC----ACTTCTGGAGCGAATTAAACACACCAAGCTTA-TAGTAAAAGGCACATAT--ATACAGATAATAATGGAATTGGTAGAAGCAGCAAAACAGCAATGATGGTTCAGACTAATTTCAATAATATCTTCCCAAACAACCAGGGAAAGAGAACCTAAAAGTTGAT i aotNan1.NW_018500622v1 I 10 I 13 s micMur3.chr20 54903662 203 + 72247402 TGTGATGTCAAATTTCTATAACA--GAGAGAAGCAGT-------TATAACTATAGCACCTGGGCAGGATTAAACACACCAAGCTTATTAGTAAAAATCATGTATATACACA---AATAAGGAAATGGGCATAAGTAGTAATACAACAATAAGAGTTTAGACCAATTTCAGTATAATCTGCCCAGACAGCTTGGGAAAGAAAACCTAAAATTTGAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2915119 203 + 9850184 TCTGATATCAAACTTCTACAGCATGGAGAGAAGCAGT-------TATAAC----ACATCTGGGCAGGATTAAACACACCAAGCTTA-TAGTAAAAATCATATATATACACAAATAATAATGAAATTGGCAGAAGTAGTAATACCACAATGAGGGTTTGGACCAATTTCATTAATATCTTCCCAAACAGCTTGGGAAAGAGAACCTAAGATTTGAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13670446 193 + 13852661 CCTAATGTCATACTTCTAAGGCATGGAGAAAAGCAGT-------TATAAG----GCATCTGGACAGAATCAAACACAC-----------ATGTAAATCATATATATACACAAATAATAATAAAATTGGCAGAAGCAGTAATACAGCAATGAGGGTTTGGGCCAATTGTAATAATATCTTCCCAAACAGCCTGGGAAACAAAACCtaaaattttat i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=61834.000000 s hg38.chr16_GL383557v1_alt 15415 9 + 89672 AT--------------------AAAACAT s panTro5.chr16 21441394 9 - 81586097 AT--------------------AAAACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507727 9 - 90481686 AT--------------------AAAACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741165 9 + 3010529 AT--------------------AAAACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849545 9 + 163208435 AT--------------------AAAACAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327712 9 - 74971481 TT--------------------AAAACAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037013 9 - 78541002 TT--------------------AAAACAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430434 9 + 26466322 TT--------------------AAAACAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758051 9 + 43916225 TT--------------------AAAACAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194695 9 + 75399963 TT--------------------AAAACAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743628 9 - 7209941 TT--------------------AAAACAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484375 9 + 3907144 TT--------------------AAAACAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498590 9 - 44557958 TT--------------------CAAACAT i calJac3.chr20 I 4 C 0 s micMur3.chr20 54903865 9 + 72247402 -T-------------------AAAAACAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2915322 8 + 9850184 -T--------------------AAAACAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13670639 28 + 13852661 -taaaaaacatttttttaattaaaaacat i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249017 13 - 10531588 I e cebCap1.NW_016107433v1 3285598 9 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=55633.000000 s hg38.chr16_GL383557v1_alt 15424 7 + 89672 TCAAAAA s panTro5.chr16 21441403 7 - 81586097 TCAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507736 7 - 90481686 TCAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741174 7 + 3010529 TCAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849554 7 + 163208435 TCAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327721 7 - 74971481 TCAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037022 7 - 78541002 TCAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430443 7 + 26466322 TCAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758060 7 + 43916225 TCAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58194704 7 + 75399963 TCAAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6743637 7 - 7209941 TCAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 484384 7 + 3907144 TTAAAAA i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2915330 7 + 9850184 TCAAAAA i proCoq1.NW_012152729v1 C 0 I 825 s otoGar3.GL873566 13670667 7 + 13852661 ttaaaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903874 0 + 72247402 C e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249017 13 - 10531588 I e cebCap1.NW_016107433v1 3285598 9 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498599 0 - 44557958 C a score=1605567.000000 s hg38.chr16_GL383557v1_alt 15431 269 + 89672 TTTGGCCAGGCATGGTGG--------------CCAGgcactttgggaggctgaggcaggcggatcat--gaggtcaggagatcgagaccatcctggctaacacggtgaaaccc-gtctctactaaaaatacaagaaaattagccggg---tgtggtggcaggcacctgcagtctcagctactcag------gaggcaggagaatggcctgaacctgggaggcggagcttgcagtgagctgagatcgggcgactgcactccagcctgggcgatagagtgagactccatctcaaaaa s panTro5.chr16 21441410 269 - 81586097 TTTggccaggcacggtgg--------------ccaggcactttgggaggctgaggcaggcggatcac--gaggtcaggagatcgagaccatcctggctaacacggtgaaacct-gtctctactaaaaatacaagaaaattagccggg---tgtggtggcaggcacctgcagtctcagctactcag------gaggcaggagaatggcctgaacctgggaggcggagcttgcaatgagctgagatcgggcgactgcactccagcctgggcaacagagcgagactccatctcaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21507743 269 - 90481686 TTTggccaggcacggtgg--------------ccaggcactttgggaggctgaggcaggcggatcac--gaggtcaggagatcgagaccatcctggctaacatggtgaaacct-gtctctactaaaaatacaagaaaattagccggg---tgtggtggcaggcacctgcagtctcagctactcag------gaggcaggagaatggcctgaacctgggaggcggagcttgcaatgagctgagatcgggcgactgcactccagcctgggcaacagagcgagactccatctcaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741181 269 + 3010529 TTTggccaggcacggtgg--------------ccaggcattttgggaggctaaggcaggcagatcac--gaggtcaggagatcaagaccatcctggctaacacggtgaaaacc-gtctctactaaaaatacaagaaaattagccggg---tgtggtggcaggcacctgcagtctcagctactcag------gaggcaggagaatggcctgaacctggcaggcggagcttgcagtgagctgagatcgggcgactgcactccagcctgggcgacagagcgagactccatttcaaaca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849561 290 + 163208435 TTTggccaggcgtggtgactcacacctgtaatcctagcactttgggaggctgaggcaggcagatcac--gaggtcaggagatcgagaccatcctggctaacacagtgaaacctggtctctactaaaaatacaaaaaaattagctggg---tgtggtggcaggcacctgtagtcccggctactcaggtgactgaggcaggagaatggcctgaacctgggaggcggagcttgcagtgagccaagatcgcaccactgtactccagcctgggcgacagagtgagactccatctcaaaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21327728 290 - 74971481 TTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagatcgagaccatactggctaacagagtgaaaccccgtctctactaaaaatacaaaaaacttagccagg---tgtggtggcaggcacttgtagtcccggctactcaggaggctgagggaggagaatggcctgaacctgggaggcagagcatgcagtgagctgagatcgggccactgtaatccagcctgggcgacagagcgagactccatctcaaaaa i rheMac8.chr20 C 0 I 95 s macFas5.chr20 21037029 290 - 78541002 TTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagatcgagaccatactggctaacagagtgaaaccccgtctctactaaaaatacaaaaaacttagccagg---tgtggtggcaggcacttgtagtcccggctactcaggaggctgagggaggagaatggcctgaacctgggaggcagagcatgcagtgagctgagatcgggccactgtaatccagcctgggcaacagagcgagactccatctcaaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430450 290 + 26466322 TTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagatcgagaccatactggctaacagagtgaaaccccgtctctactaaaaatacaaaaaacttagccagc---tgtggtggcaggcacttgtagtcccggctactcaggaggctgagggaggagaatggcctgaacctgggaggcagagcatgcagtgagctgagatcgggccactgtaatccagcctgggcgacagagcgagactccatctcaaaaa i macNem1.NW_012011355v1 C 0 I 95 s cerAty1.NW_011999143v1 20758067 290 + 43916225 TTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagatcgagaccatactggctaatacagtgaaaccccgtctctactaaaaatacaaaaaaattagccagg---tgtggtggcaggcacttgtagtcccggctactcaggaggctgagggaggagaatggcctgaacctgggaggcagagcatgcagtgagctgagatcgggccactgcaatccagcctgggcgacagagcaagactccatctcaaaaa i cerAty1.NW_011999143v1 C 0 I 95 s chlSab2.chr5 58194711 290 + 75399963 TTCggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagatcgagaccatactggctaacacagtgaaaccctgtctctactaaaaatacaaaaaaattagccagg---tgtggtgccaggcacttgtagtcccggctactcaggaggctgagggaggagaatggcctgaacctgcgaggcggagcatgcagtgagctgagatcgggccactgcaattcagcctgggcgacagagcgagactccatctcaaaaa i chlSab2.chr5 C 0 I 86 s manLeu1.NW_012101698v1 6743644 290 - 7209941 TTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtggacagatcac--aaggtcaggagatcgagaccatactggctaacacagtgaaaccccgtctctactaaaaatacaaaaaaattagccagg---tgtggtggcaggcacttgtagtcccggctactcaggaggctgagggaggagaatggcctgaacctgggaggcagagcatgcagtgagctgagatcaggccactgcaatccagcctgggcgacagagcgagactccatctcaaaaa i manLeu1.NW_012101698v1 C 0 I 95 s colAng1.NW_012123265v1 484391 290 + 3907144 TTTggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac--aaggtcaggagatcaagaccatcctggctaacacagtgaaaccctgtctctactaaaaatacaaaaaaattagctggg---cgtggtggcaggcacttgtagtcccagctactcaggaggctgagggaggagaatggcctaaacctgggaggtggagcatgcagtgagctgagatcgggccactgcaatccagcctgggtgacagagcgagactccgtctcaaaaa i colAng1.NW_012123265v1 C 0 I 6 s otoGar3.GL873566 13670674 287 + 13852661 CTCAgccaggcaaggtggctcatgcctgtaatcctagcactataggagttagaggtggatagatcgcctgagctcatgagtttgagaccagcctga--gaaagggcaagactttgtctctatttaatttttaaaa-----agccaggcattgtgggagcagacacctatagtcccagctactctggaggctcaagcaagaggatctcttgagcccaagagtttgaagttgctctgagtcataatgatgccacagcactcaaacccaga-gccaaggcatgagacggtttcaaaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903874 0 + 72247402 C e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249017 13 - 10531588 I e cebCap1.NW_016107433v1 3285598 9 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498599 0 - 44557958 C a score=-1471.000000 s hg38.chr16_GL383557v1_alt 15700 4 + 89672 c--------aca s panTro5.chr16 21441679 4 - 81586097 C--------ACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508012 4 - 90481686 c--------aca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741450 4 + 3010529 c--------aca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849851 12 + 163208435 ccatctcaaaca i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21037319 4 - 78541002 --------aaca i macFas5.chr20 C 0 I 91 s colAng1.NW_012123265v1 484687 4 + 3907144 --------caca i colAng1.NW_012123265v1 I 6 I 2 s otoGar3.GL873566 13670961 4 + 13852661 --------aaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903874 0 + 72247402 C e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249017 13 - 10531588 I e cebCap1.NW_016107433v1 3285598 9 - 5917169 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498599 0 - 44557958 C a score=14289.000000 s hg38.chr16_GL383557v1_alt 15704 11 + 89672 cacacacacac s panTro5.chr16 21441683 11 - 81586097 CACACACACAC i panTro5.chr16 C 0 I 24 s panPan2.chr16 21508016 11 - 90481686 cacacacacac i panPan2.chr16 C 0 I 24 s gorGor5.CYUI01000018v1 741454 11 + 3010529 cacacacacac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849863 11 + 163208435 cacacacacac i nomLeu3.chr2 C 0 I 24 s colAng1.NW_012123265v1 484693 11 + 3907144 cacacacacac i colAng1.NW_012123265v1 I 2 I 8 s otoGar3.GL873566 13670965 4 + 13852661 -------aaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903874 0 + 72247402 C e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249017 13 - 10531588 I e cebCap1.NW_016107433v1 3285598 9 - 5917169 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498599 0 - 44557958 C a score=5139.000000 s hg38.chr16_GL383557v1_alt 15715 4 + 89672 acac s panTro5.chr16 21441718 4 - 81586097 ACAC i panTro5.chr16 I 24 C 0 s panPan2.chr16 21508051 4 - 90481686 acac i panPan2.chr16 I 24 C 0 s gorGor5.CYUI01000018v1 741465 4 + 3010529 acac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849898 4 + 163208435 aAAT i nomLeu3.chr2 I 24 C 0 s colAng1.NW_012123265v1 484712 4 + 3907144 acaT i colAng1.NW_012123265v1 I 8 C 0 s cebCap1.NW_016107433v1 3285607 4 - 5917169 ACAT i cebCap1.NW_016107433v1 I 9 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903874 0 + 72247402 C e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249017 13 - 10531588 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498599 0 - 44557958 C e otoGar3.GL873566 13670969 0 + 13852661 C a score=303836.000000 s hg38.chr16_GL383557v1_alt 15719 72 + 89672 tcaAAAATTCATCTAGTTTCTCAATCACCTCTTTGTTCATACAACAAACAAATATTTGAGTAAGG-TACTATG s panTro5.chr16 21441722 72 - 81586097 TCAAAAATTCATCTAGTTTCTCAGTCACCTCTTTGTTCATACAACAAACAAATATTTGAGTAAGG-TACTATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508055 72 - 90481686 tcaAAAATTCATCTAGTTTCTCAATCACCTCTTTGTTCATACAACAAACAAATATTTGAGTAAGG-TACTATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741469 72 + 3010529 tcaaaaactcaTCTAGTTTCTCAATCACCTCTTTGTTCATACAACTAACAAATATTTGAGTAAGG-TACTATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849902 72 + 163208435 TCAAAAATTCATCTAGTTTCTCAATCACCTCTTTGTTCATACAACTAACAAATATTTGAATAAGG-TACTATG i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 484716 72 + 3907144 TCAAAAATTCATCTAGTTTCTCAATCACCTCTTTGTTCATACAACTAACAAATATTTGAGTAAGG-TACTATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498599 72 - 44557958 TCAAAAATTCATCTGGTTTCTGTATCACTTCTTTGTTCATACAACTAACAAATACTTGAGTAAGG-TACTATG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285611 73 - 5917169 TCAAAAATTCATCTAGTTTCTGTATCACTTCTTTGTTCACACAAATAACAAATATTTGAGTAAGGTTACTATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249030 72 - 10531588 TCAAAAATTCATCTAGTTTCTGTATCACTTCTTTGTTCATACAACTAACAAATATTTGAGTAAGG-CAGTGTG i aotNan1.NW_018500622v1 I 13 C 0 s micMur3.chr20 54903874 72 + 72247402 TCAAAAACTCATCTAGCTTCTCTATCACCTCCTTGTTCATGCAATTAATAAATATTTGAGAAAGG-TATTATG i micMur3.chr20 C 0 I 42 s otoGar3.GL873566 13670969 72 + 13852661 ttaaaaaTTCATTTAGCTTCTCCATCACTTCCGTGTTCATGGAATTAACAAATATTTGAACAAGG-CCTTATG i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=140869.000000 s hg38.chr16_GL383557v1_alt 15791 44 + 89672 CTAGGTACAGAAGGAA--------------------------------ATATGTATATTTCTGGTTCTCGTACTCC s panTro5.chr16 21441794 44 - 81586097 CTAGGTACAGAAGGAA--------------------------------ATATGTATATTTCTGGTTCTTGTACTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508127 44 - 90481686 CTAGGTACAGAAGGAA--------------------------------ATATGTATATTTCTGGTTCTTGTACTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741541 44 + 3010529 CTAGGTACAGAAGGAA--------------------------------ATATGTATATTTCTGGTTCTTGTACTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53849974 44 + 163208435 CTAGGTATAGAAGGAA--------------------------------ATATGTGTATTTCTGGTTCTTGTACTTC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 484788 40 + 3907144 CTAGGTACA----GAA--------------------------------ATATGTGTATTTCTGGTTCTTGTGCTCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498671 44 - 44557958 CTAGATACAGAAGGAA--------------------------------ATATATATATTTGTGGTTCTTGTACTCC i calJac3.chr20 C 0 I 1 s cebCap1.NW_016107433v1 3285684 44 - 5917169 CTAGCTACAGAAGGAA--------------------------------ATATGTATATTTGTGATTCTTGCACTCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249102 44 - 10531588 CTAGATACAGAAGGAA--------------------------------ATATGTGTATTTGTGGTTCTTGTACTCC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13671041 76 + 13852661 CTAGGTACAGAAGGAAataaataaataaatatacatacacacacatacatatatatatttgtaGTTTTTATACTCT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903946 42 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=687.000000 s hg38.chr16_GL383557v1_alt 15835 10 + 89672 A----------------------------------GA------TTTTTTT- s panTro5.chr16 21441838 10 - 81586097 A----------------------------------GA------TTTTTTt- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508171 10 - 90481686 A----------------------------------GA------TTTTTtt- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741585 10 + 3010529 A----------------------------------GA------TTTTTTT- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850018 16 + 163208435 A----------------------------------GATGTGTTTTTTTTT- i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 484828 10 + 3907144 A----------------------------------GA------TGTTTTT- i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13671117 45 + 13852661 GTATTATCTAGTAAAATGGACAAGGTTTTATCAAAAA------TTATTTTT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903946 42 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249146 0 - 10531588 C e cebCap1.NW_016107433v1 3285728 0 - 5917169 C e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498715 1 - 44557958 I a score=1365.000000 s hg38.chr16_GL383557v1_alt 15845 1 + 89672 t s panTro5.chr16 21441848 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508181 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741595 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850034 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s otoGar3.GL873566 13671162 1 + 13852661 T i otoGar3.GL873566 C 0 I 137 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903946 42 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249146 0 - 10531588 C e cebCap1.NW_016107433v1 3285728 0 - 5917169 C e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e colAng1.NW_012123265v1 484838 0 + 3907144 C e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498715 1 - 44557958 I a score=126193.000000 s hg38.chr16_GL383557v1_alt 15846 132 + 89672 tttt------tgtatttttagtagacactgggtttcactgtgttagct-aggatgatcttgatctcctgatctcatg--atccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccca-----gccT- s panTro5.chr16 21441849 131 - 81586097 tttt-------gtatttttagtagacactgggtttcactgtgttagct-aggatgatctcgatctcctgatctcatg--atccgcccgcctaggcctcccaaagtgctgggattacaggcgtgagccaccgcgccca-----gccT- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508182 130 - 90481686 ttt--------gtatttttagtagacactgggtttcactgtgttagct-aggatgatctcgatctcctgatctcatg--atccgcccgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcgccca-----gccT- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741596 133 + 3010529 Tttt----tttgtatttttagtagacactgggtttcactgtgttagct-aggatgatctcgatctcc-gatctcatg--atccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccca-----gccT- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850035 138 + 163208435 TTTTCttttttgtatttttagtaaagactgggtttcactgtgttagct-aggattatctcaatctcttgacctcatg--atctgcctgcctcggcctcccaaaatgctgggattacaggcgtgagccaccgtgcccg-----gccT- i nomLeu3.chr2 C 0 C 0 s otoGar3.GL873566 13671300 138 + 13852661 ------tttttctatttttagtaggaacaggatctcact---tttgctcaggctggtctcgaactcatgagcttaagcaatctacctgccttggcctcccagcgttgaaggattgtaggtgtgaaccacagcacACACACACACCCC i otoGar3.GL873566 I 137 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54903946 42 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249146 0 - 10531588 C e cebCap1.NW_016107433v1 3285728 0 - 5917169 C e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e colAng1.NW_012123265v1 484838 0 + 3907144 C e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498715 1 - 44557958 I a score=3276.000000 s hg38.chr16_GL383557v1_alt 15978 1 + 89672 A s panTro5.chr16 21441980 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508312 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741729 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850173 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s cebCap1.NW_016107433v1 3285728 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249146 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54903988 1 + 72247402 a i micMur3.chr20 I 42 C 0 s otoGar3.GL873566 13671438 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e colAng1.NW_012123265v1 484838 0 + 3907144 C e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21498715 1 - 44557958 I a score=23437.000000 s hg38.chr16_GL383557v1_alt 15979 9 + 89672 GATGTTTTT s panTro5.chr16 21441981 9 - 81586097 GATGTTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508313 9 - 90481686 GATGTTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741730 9 + 3010529 GATGTTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850174 9 + 163208435 GATGTTTTT i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21498716 9 - 44557958 GATGCTTTT i calJac3.chr20 I 1 C 0 s cebCap1.NW_016107433v1 3285729 9 - 5917169 GATGCTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249147 9 - 10531588 GATGCTTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54903989 9 + 72247402 gatgtttat i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13671439 5 + 13852661 GATCT---- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e colAng1.NW_012123265v1 484838 0 + 3907144 C e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=118114.000000 s hg38.chr16_GL383557v1_alt 15988 38 + 89672 TACCTAGTAAAATAAGCAAGGTTTTGTTAAAA--TATTTG s panTro5.chr16 21441990 38 - 81586097 TACCTAGTAAAATAAGCAAGGTTTTGTTAAAA--TATTTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508322 38 - 90481686 TACCTAGTAAAATAAGCAAGGTTTTGTTAAAA--TATTTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741739 38 + 3010529 TACCTAGTAAAATAAGCAAGGTTTTGTTAAAA--TATTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850183 38 + 163208435 TACCAAGTAAAATAAGCAAGGTTTTATCAAAA--TATTTG i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 484838 38 + 3907144 TACCTAGTAAAATAAGCAAAGTTTTGTCAAAA--TATTTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498725 37 - 44557958 TATCTAGTAAAATAAGTAAGG-TTTGTCAAAA--TATTTG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285738 37 - 5917169 TATCTAGTAAAATAAGGAAGG-TTTGTCAAAA--TATTTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249156 37 - 10531588 TATCTAATAAAATAAGTAAGG-TTTGTCTAAA--TATTTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54903998 38 + 72247402 TACCTAGTAAAATGGGCAAGGTTTTATCAAAAATTATT-- i micMur3.chr20 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2915337 825 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671444 0 + 13852661 C a score=12875.000000 s hg38.chr16_GL383557v1_alt 16026 3 + 89672 TTT s panTro5.chr16 21442028 3 - 81586097 TTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508360 3 - 90481686 TTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741777 3 + 3010529 TTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850221 3 + 163208435 TTT i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 484876 3 + 3907144 TTT i colAng1.NW_012123265v1 C 0 I 309 s calJac3.chr20 21498762 3 - 44557958 TTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3285775 3 - 5917169 TTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249193 3 - 10531588 TTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54904036 3 + 72247402 TTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916162 3 + 9850184 ttt i proCoq1.NW_012152729v1 I 825 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671444 0 + 13852661 C a score=416135.000000 s hg38.chr16_GL383557v1_alt 16029 90 + 89672 TATTCTTCACTGTTTTAAAGAGCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATACAGAATCTGTCTCTGAACCTCTtctacactagaa s panTro5.chr16 21442031 90 - 81586097 TATTCTTCACTGTTTTAAAGATCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATACAGAATCTGTCTCTGAACCTCTtctacactagaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508363 90 - 90481686 TATTCTTCACTGTTTTAAAGATCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATACAGAATCTGTCTCTGAACCTCTtctacactagaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741780 90 + 3010529 TATTCTTCACTGTTTTAAAGATCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATACAGAATCTGTCTCTGAACCTCTtctacactagaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850224 90 + 163208435 TATTCTTCACTGTTTTAAAGATCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATATAGAATCTGTCTCTGACCCTCTtctacagtagaa i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 485188 88 + 3907144 TATTCTTCACTGTTTCAAAGATCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATATAGAA--TATCTCTGAACCTCTtctacagtagaa i colAng1.NW_012123265v1 I 309 C 0 s calJac3.chr20 21498765 90 - 44557958 TATTCTTCACTGTTTTAAAGCTCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATATAGAATCTGTCTCTGAACCTCTtctacagtagaa i calJac3.chr20 C 0 I 1 s cebCap1.NW_016107433v1 3285778 85 - 5917169 TATTCTTCACTGTTTTAAAGA-----TCTTTTTTAATTCTGTGCCTCTGGCAAATATAGAGTATGTATCTGAACCTCTtcaacagtagaa i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9249196 90 - 10531588 TATTCTTCACTGTTTTAAAGATCTTTTCTTTTTTAATTCTGTGCCTCTGGCAAATATAGAATATGTCTCTGAACCTCTtctacagtagaa i aotNan1.NW_018500622v1 C 0 I 457 s micMur3.chr20 54904039 88 + 72247402 TATTCTTCATTATTTTAAAGATCTCATCTTTCTTAATTGTGTGCCTCTGGGAAATATAGA--CTATCTCTGTACCTCTtctacagaacaa i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916165 87 + 9850184 tattcttCACTATTTTAAAGATC---TCTTTCTTAATTCTGTGCCTTGGGCAAATATAGAACCTATCTCTGTACCTCTtctacagtacaa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13671444 62 + 13852661 ----------------------------TTTCTTAATTCTGTGCCTCTGGCAACTATAGACTTTGTCTCTGCACCTCTTCTGcagtacaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=393379.000000 s hg38.chr16_GL383557v1_alt 16119 122 + 89672 tggataaattgtgaaaaattcaaaatatgcagtataacaatgagaaacaataaactacaggtatacacagcaa-atggtttaagctcataaaagtaagctaaggaaaagaagccaaacacaaa s panTro5.chr16 21442121 122 - 81586097 tggataaattgtgaaaaattcaaaatatgcagtataacaatgagaaagaataaactacaggtatacacagcaa-atggtttaagctcataaaagtaagctaaggaaaagaagccaaacacaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508453 122 - 90481686 tggataaattgtgaaaaattcaaaatatgcagtataacaatgagaaagaataaactacaggtatacacagcaa-atggtttaagctcataaaagtaagctaaggaaaagaagccaaacacaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741870 122 + 3010529 tggataaattctgaaaaattcaaaatatgcagtataacaatgagaaagaataaactacaggtatacacagcaa-atggtttaagctcataaaagtaagctaaggataagaagccaaacacaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850314 117 + 163208435 tggataaattgtgaaaaattc-aaatatgcagtataacaatgagaataaataaactacaggtatacacagcaa-atggtttaagctcat-aaagtaagcta--ggaaaagagccagacac-aa i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 485276 122 + 3907144 cagataaattgtgaaaatttcaaaatatgcagtatgacaatgagaatgaataaactacaagtatacacagcaa-atggtttaagctcataaaagtatgttaaggaaaagaagccaaacacaga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498856 122 - 44557958 tggataaattgtgaaaaatccacaatatgcaatataacaatgagaatgaataaaccacaggtatacatagcaa-atggtttaagctcataaaagtatactaaggaaaagaagctaaacacaaa i calJac3.chr20 I 1 C 0 s cebCap1.NW_016107433v1 3285864 122 - 5917169 tggataaattgtgaaaaatccacaatatgcaatataacaatgagaatgaataaactacagctatacacagcaa-atagtttaggctcatagaagtatactaaggaaaagaagccaaacacaaa i cebCap1.NW_016107433v1 I 1 C 0 s micMur3.chr20 54904127 122 + 72247402 tggataaactgtggcatgctcttaatgtataatacaataatgagaatgaataaactacaggtatatacagcaatttggtttaagctcatgaaagtatgctgagcaaaagaagtcaaacacaa- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916252 120 + 9850184 tggataaactgtggcacactcataatgtgtaatac---aacgagaatgaataaactacagatatatacagcaatgtggtttaagctcatgaaagtacactgagcaaaagaagccaaacacaaa i proCoq1.NW_012152729v1 C 0 I 303 s otoGar3.GL873566 13671506 72 + 13852661 tggataagctgtggtacattcatgatgtataataa-ataatgaagacgaataaactataaatatatgccgtaa-------------------------------------------------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=47436.000000 s hg38.chr16_GL383557v1_alt 16241 15 + 89672 agagtacatactata s panTro5.chr16 21442243 15 - 81586097 agagtacatactata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508575 15 - 90481686 agagtacatactata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 741992 15 + 3010529 agagtacatactatg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850431 15 + 163208435 agagtacatactata i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 485398 15 + 3907144 agagtacatactata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498978 15 - 44557958 agagtacatactata i calJac3.chr20 C 0 I 3 s cebCap1.NW_016107433v1 3285986 15 - 5917169 agaatacatactata i cebCap1.NW_016107433v1 C 0 I 8 s micMur3.chr20 54904249 15 + 72247402 agagcacatactata i micMur3.chr20 C 0 I 582 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671578 0 + 13852661 C a score=10374.000000 s hg38.chr16_GL383557v1_alt 16256 11 + 89672 ctatatctttt s panTro5.chr16 21442258 11 - 81586097 ctatatctttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508590 11 - 90481686 CTATATCtttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742007 11 + 3010529 ctatatttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850446 11 + 163208435 tcttttctttc i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 485413 6 + 3907144 -----tctttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21498996 11 - 44557958 tttttcctttt i calJac3.chr20 I 3 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e cebCap1.NW_016107433v1 3286001 8 - 5917169 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671578 0 + 13852661 C a score=176275.000000 s hg38.chr16_GL383557v1_alt 16267 125 + 89672 acttttttttttttt---ttgagacgaagttttgctcttgttgcccaggctggagtgcagtggcacgatctcggttcactgccacctccgcctcctgggttccagagattctcctgcctcggcctccc s panTro5.chr16 21442269 123 - 81586097 acttttttttttttt-----gagacgaagttttgctcttgttgcccaggctggagtgcagtggcacaatctcagttcaccgccacctccgcctcctgggttccagagattctcctgccttggcctccc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21508601 124 - 90481686 acttttttttttttt----tgagacgaagttttgctcttgttgcccaggctggagtgcagtggcacaatctcagttcaccgccacctccgcctcctgggttccagagattctcctgcctcggcctccc i panPan2.chr16 C 0 M 966 s gorGor5.CYUI01000018v1 742018 128 + 3010529 ctttttttttttttttttttgagacgaagttttgctcttgttgcccaggctggagtgcagtggcgcaatctcggttcaccgccacctccgcctcctgggttccagagattctcctgcctcggcctccc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850457 124 + 163208435 ttttttttttttttt--tttgagacgag--ttcactcttgttgcccaggctggagtgcaggggtgcaatctcggttcactgccacctctgcctcctggtttcaagaaattctcctgcctcagcctccc i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 485419 125 + 3907144 tcttttttttttttt---ttgagacggagtttcgctcttgttgcccaggctggtgtgcagtggtgcgatctcggttcactgccacctccgcctcctgggttccagagattctcctgcctcggcctccc i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13671578 119 + 13852661 --tttttcttttttt---gtgagacagagtctcact-ttgttatccttggtagagtactgttgtg---tcacagctcacagcaacttcaaactcctggacttaagtgattctcttgctttggcctctt i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e cebCap1.NW_016107433v1 3286001 8 - 5917169 I e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499007 0 - 44557958 C a score=112568.000000 s hg38.chr16_GL383557v1_alt 16392 108 + 89672 tagtagctgggattacagacatgcaccaccatgtccggctagttttgtacttttagtagagacagggtttctccatgttggtcaggctggtctcaaactcctgacctc s panTro5.chr16 21442392 108 - 81586097 tagtagctgggattacagacatgcaccaccatgcccggctagttttgtacttttagtagagacagggtttctccatgttggtcaggctgctctcaaactcctgacctc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742146 108 + 3010529 tagtagctgggattacagacatgcaccaccatgcccggctagttttgtacttttagtagagacagggtttctccatgttggttaggctggtctcaaactcctgacctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850581 108 + 163208435 gagtagctgggattacaggcatgcaccatcatgcccggctaattttgtacttttagtagaaacggggtttctccatgttggtcaggctggtctcgaactcccgacctc i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 485544 108 + 3907144 gaacagttgggattacaggcatgcaccaccatgcccagctagttttgtacttttagtagagacgggttttctccatgttggtcaggctggtctcgaactcccgacctc i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13671697 96 + 13852661 gagtagctgggactacaggcacccaccacaacacctggctattttt----------tagagacgaggtctggttctg--gctcaggctggtctcaaacctgtgagctc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e cebCap1.NW_016107433v1 3286001 8 - 5917169 I e panPan2.chr16 21508725 966 - 90481686 M e macNem1.NW_012011355v1 14430740 95 + 26466322 I e rheMac8.chr20 21328018 95 - 74971481 I e macFas5.chr20 21037323 91 - 78541002 I e manLeu1.NW_012101698v1 6743934 95 - 7209941 I e chlSab2.chr5 58195001 86 + 75399963 I e cerAty1.NW_011999143v1 20758357 95 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499007 0 - 44557958 C a score=14695.000000 s hg38.chr16_GL383557v1_alt 16500 3 + 89672 agg s panTro5.chr16 21442500 3 - 81586097 agg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742254 3 + 3010529 agg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850689 3 + 163208435 agg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21328113 3 - 74971481 agg i rheMac8.chr20 I 95 C 0 s macFas5.chr20 21037414 3 - 78541002 agg i macFas5.chr20 I 91 C 0 s macNem1.NW_012011355v1 14430835 3 + 26466322 agg i macNem1.NW_012011355v1 I 95 C 0 s cerAty1.NW_011999143v1 20758452 3 + 43916225 agg i cerAty1.NW_011999143v1 I 95 C 0 s manLeu1.NW_012101698v1 6744029 3 - 7209941 agg i manLeu1.NW_012101698v1 I 95 C 0 s colAng1.NW_012123265v1 485652 3 + 3907144 agg i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13671793 3 + 13852661 aga i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e cebCap1.NW_016107433v1 3286001 8 - 5917169 I e panPan2.chr16 21508725 966 - 90481686 M e chlSab2.chr5 58195001 86 + 75399963 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499007 0 - 44557958 C a score=301663.000000 s hg38.chr16_GL383557v1_alt 16503 61 + 89672 tgatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccgtgcccgg s panTro5.chr16 21442503 61 - 81586097 tgatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccgtgcctgg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742257 61 + 3010529 tgatccgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccgtgcccgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850692 61 + 163208435 tgatccgcccacctcggcctcccaaagtgttgggattacaggcgtgagccaccgtgcctgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21328116 61 - 74971481 tgatctgcccacctcggcctcccaaagtactgggattacacgcgtaagccactgtgcccAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037417 61 - 78541002 tgatctgcccacctcggcctcccaaagtactgggattacacgcgtaagccactgtgcccAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430838 61 + 26466322 tgatctgcccacctcggcctcccaaagtactgggattacacgcgtaagccactgtgcccAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758455 61 + 43916225 tgatctgcccacctcggcctcccaaagtactgggattacacgcgtgagccactgtgcccAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195087 61 + 75399963 tgatctgcccacctcggcctcccaaagtactgggattacatgcgtgagccactgtgcccAC i chlSab2.chr5 I 86 C 0 s manLeu1.NW_012101698v1 6744032 61 - 7209941 tgatctgcccaccttggcctctcaaagtactgggattgaacgcgtgagccactgtgcccAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 485655 61 + 3907144 tgatctgcccacctcggcctcccaaagtggtgggattacaggtgtgagccactgtgcctgT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13671796 53 + 13852661 ----caatccacc---acctcccaac-tgctgggattacaggcgtgagccactgcacccag i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e cebCap1.NW_016107433v1 3286001 8 - 5917169 I e panPan2.chr16 21508725 966 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499007 0 - 44557958 C a score=7800.000000 s hg38.chr16_GL383557v1_alt 16564 1 + 89672 c s panTro5.chr16 21442564 1 - 81586097 c i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742318 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850753 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21328177 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037478 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430899 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758516 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195148 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744093 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 485716 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3286009 1 - 5917169 c i cebCap1.NW_016107433v1 I 8 C 0 s otoGar3.GL873566 13671849 1 + 13852661 c i otoGar3.GL873566 C 0 I 63 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e panPan2.chr16 21508725 966 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499007 0 - 44557958 C a score=37354.000000 s hg38.chr16_GL383557v1_alt 16565 7 + 89672 ttttttt s panTro5.chr16 21442565 7 - 81586097 ttttttt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742319 7 + 3010529 ttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850754 7 + 163208435 ttctttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21328178 7 - 74971481 ttctttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037479 7 - 78541002 ttctttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430900 7 + 26466322 ttctttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758517 7 + 43916225 ttctttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195149 7 + 75399963 ttctttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744094 5 - 7209941 ttc--tt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 485717 7 + 3907144 ttctttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499007 7 - 44557958 ttttttt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286010 7 - 5917169 ttttttt i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9249286 457 - 10531588 I e panPan2.chr16 21508725 966 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671850 63 + 13852661 I a score=258343.000000 s hg38.chr16_GL383557v1_alt 16572 44 + 89672 -tttttttttt-----gagatg-aagtctcactgtgtcacccagactggag s panTro5.chr16 21442572 46 - 81586097 -tttttttttt---ttgagatg-aagtctcactgtgtcacccagactggag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742326 49 + 3010529 -tttttttttttttttgagatg-aagtctcactgtgtcacccagactggag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850761 44 + 163208435 -tttttttttt-----gagaca-gaatctcactgtgtcacccagactggag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21328185 43 - 74971481 -atcttttat------gagacg-gagtctcactgtgtcacccagactggag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037486 43 - 78541002 -atcttttat------gagacg-gagtctcactgtgtcacccagactggag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430907 43 + 26466322 -atcttttat------gagacg-gagtctcactgtgtcacccagactggag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758524 43 + 43916225 -atcttttat------gagacg-gagtctcactgtgtcacccagactggag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195156 43 + 75399963 -atcttttat------gagacg-gagtctcactgtgtcacccagaccggag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744099 43 - 7209941 -atcttttat------gagacg-gagtctcactgtgtcacccagactggag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 485724 43 + 3907144 -attttttat------gagatg-gagtctcactgtgtcacccagactggag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499014 45 - 44557958 tttttttttt------gagatgggagtcacgttgtatggcccaggctggag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286017 45 - 5917169 tttttttttt------tagatgagagtctcattgtatggcccaggctggag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249743 45 - 10531588 tttttttttt------gagatgggaatctcattgtgtggcccaggctggag i aotNan1.NW_018500622v1 I 457 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21508725 966 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671850 63 + 13852661 I a score=1890674.000000 s hg38.chr16_GL383557v1_alt 16616 244 + 89672 tgcaatggtgct-atctcagcttactgcaacctctacctcccaggttcaagcaattctcccatctcagcctcccaagtagctgggattaccagcgagcaccaccatgcctggctaatttttgtatttttagttgagatgggggtttcatcatgttggccaggctggtctcgaactcctgatctcaggtgatccgcctgcctcagcctcccaaagtgctggg-attacaggcataagccaccacccc s panTro5.chr16 21442618 244 - 81586097 tgcaatggtgct-atctcagctcactgcaacctctacctcccaggttcaagcaattctcccatctcagcctcccaagtagctgggattactggcgagcaccaccatgcctggctaatttttgtatttttagttgagatgggggtttcatcatgttggccaggctggtctcgaactcctgatctcaggtgatccgcctgcctcagcctcccaaagtgctggg-attacaggcataagccaccacacc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21509700 245 - 90481686 tgcaatggtgctaatctcagctcactgcaacctctacctcccaggttcaagcaattctcccatctcagcctcccaagtagctgggattactggcgagcaccaccatgcctggctaatttttgtatttttagttgagatgggggtttcatcatgttggccaggctggtctcgaactcctgatctcaggtgatccgcctgcctcagcctcccaaagtgctggg-attacaggcataagccaccacacc i panPan2.chr16 M 966 C 0 s gorGor5.CYUI01000018v1 742375 244 + 3010529 tgcaatggtgct-atctcagctcactgcaacctctacctcccaggttcaagcaattctcccatctcagcctcccaagtagctgggattactggcgagcaccaccatgcctggctaatttttgtatttttagttgagatgggggtttcatcatgttggccaggctggtctcgaactcctgatctcaggtgatccgcctgcctcagcctcccaaagtgctggg-attacaggcataagccaccacacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53850805 243 + 163208435 tgcagtggtgca-atctcggctcactgcaacctctgcctcccaggttcaaacaattctcccatctcagcctccccagtagctgggattactggcatgcaccattacgcctggctaatttttgcatttttagttgagat-ggggtttcaccatgttggccaggctggtctcgaacttctgacctcaggtgatccgcctgcctcagcctcccaaagtgctagg-attacaggcataagccaccacacc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21328228 226 - 74971481 tgcaatggcaca-atctcggctcactgcaacctccacctccagggttcaagcagtgctcccatctcagcctcctgagtagctgggattaccggcatgcgccaccacgc----ctaattattgtatttttagttgagaa-tgggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccaaagtgctggg-att-------------acCGCATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037529 226 - 78541002 tgcaatggcaca-atctcggctcactgcaacctccacctccagggttcaagcagtgctcccatctcagcctcctgagtagctgggattaccggcatgcgccaccacgc----ctaattattgtatttttagttgagaa-tgggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccaaagtgctggg-att-------------acCGCATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14430950 226 + 26466322 tgcaatggcaca-atctcggctcactgcaacctccacctccagggttcaagcagtgctcccatctcagcctcctgagtagctgggattaccgtcatgcgccaccacgc----ctaattattgtatttttagttgagaa-tgggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccaaagtgctggg-att-------------acCGCATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758567 226 + 43916225 tgcaatggcaca-atctcggctcactgcaacctccacctccagggttcaagcagtgctcccatctcagcctcctgagtagctgggattaccggcatgcgccaccacgc----ctaattattgtatttttagttgagaa-tgggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccaaagtgctggg-att-------------acCGCATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195199 226 + 75399963 tgcaatggcaca-atctcggctcactgcaacctccacctccagggttcaagcagtgctcccatctcagcctcctgagtagctgggattaccggcatgcgccaccacgc----ctaattactgtatttttagttgagaa-tgggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccacctgcttcagcctcccaaagtgctggg-att-------------acCGCATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744142 226 - 7209941 tgtaatggcaca-atctcggctcactgcaacctccacctccagggttcaagcagtgctcccatctcagcctcctgagtagctgggattactggcatgcgccaccacgc----ctaattattgtatttttagttgagaa-tgggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccaaagtgctggg-att-------------acCGCATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 485767 243 + 3907144 tacaatggcaca-atctcggctcactgcaacctccgcctcctgagttcaagcaatgctcccatctcagcctcccgagtagctgggattaccggcgtgtgccaccacgcctgactaattattgtatttttagttgagat-agggtttcaccatgttggccaggctggtctcgaactcctaacctcaggtgatccgcctgcttcagcctcccaaagtgctgtg-attagaggcataagccactgcacc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499059 244 - 44557958 tacaatggtaca-atctcggctcactgcaacctctgcctctcaggttcaagtgattctcccacctcagcctcctgagtagctgggattacaggcatgcaccaccatgcctggctaatttttgtatttttagtggagat-ggggtttcaccatgttagccaggctgttctcgaactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggaattacaggcataagccaccttgcg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286062 244 - 5917169 tacaatggtaca-atctcgactcactgcaacctctgcctctcaggttcaagtgattctcccacctcagcctcctgagtagctgggattacaggcgtgcaccaccacgcctggctaatttttgtatttttagtggagac-ggggtttcaccatgtcggccaggctgttctcgaactcctgacctcaggtgatctgcccgcctctgcctcccaaagtgctgggaattacaggcgtaagttacctcacc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9249788 244 - 10531588 tacaatggtaca-atctcagctcactgcaacctctgcctctcaggttcaagtgattctcccacctcagcctcctgagtagctgagattacaggcgtgcaccaccacgcctggctaatttttgtatttttcgtggagac-ggggtttcaccatgttggccaggctgttctcgaactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctggggattacaggcgtaagccacctcgcc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13671850 63 + 13852661 I a score=979406.000000 s hg38.chr16_GL383557v1_alt 16860 99 + 89672 tggccta-ttttttt-catttttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacacttggatgggaggtgaagtgcctgaaaa s panTro5.chr16 21442862 99 - 81586097 tggccta-ttttttt-catttttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacacttggatgggaggtgaagtgcctgaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21509945 99 - 90481686 tggccTA-TTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacacttggatgggaggtgaagtgcctgaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742619 99 + 3010529 tggccta-ttttttt-catttttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacacttggatgggaggtgaagtgcctgaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53851048 99 + 163208435 cgtccta-ttttttt-catttttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagtgtctgaaaA i nomLeu3.chr2 C 0 M 4509 s rheMac8.chr20 21328454 99 - 74971481 TGGCCTA-TTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037755 99 - 78541002 TGGCCTA-TTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431176 99 + 26466322 TGGCCTA-TTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758793 99 + 43916225 TGGCCTA-TTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195425 100 + 75399963 TGGCCTATTTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744368 99 - 7209941 TGGCCTA-TTTTTTT-CATTtttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486010 100 + 3907144 tggcctatttttttt-catttttacatgaagttcaaaaacagggaaaactaagctacagtatt-agag-----------gctacccttggatgggaggtgaagcgcctgaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499303 100 - 44557958 tgaccta-ttttttt-catttttacatgaagttcaaaaacagggaaaactaagctatggtattaagag-----------gctacacttggatgggaggtgaagtgcctgaaaa i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286306 100 - 5917169 tggccta-tttttttgcatttttacataaaattcaaaaacagggaaaactaagctatggtatt-agag-----------gctacacttggatggggggtgaagtgcctgaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250032 99 - 10531588 cagccta-ttttttt-catttttacataaagttcaaaaacagggaaaactaagctatggtatt-agag-----------gctacacttggatgggaggttaagtgcctgaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13671913 109 + 13852661 taatata-tattttc-ca-ttttacattaagttcaaaaccaagcaaaattaatctatggtatt-ggaggtagaataacagttacccttagaggggaagtaaagtgcctgaaaa i otoGar3.GL873566 I 63 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=69888.000000 s hg38.chr16_GL383557v1_alt 16959 12 + 89672 ----tgtgcatgagta s panTro5.chr16 21442961 12 - 81586097 ----tgtgcatgagta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510044 12 - 90481686 ----tgtgcatgagta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742718 12 + 3010529 ----tgtgcatgagta i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328553 12 - 74971481 ----ggtgcatgggta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037854 12 - 78541002 ----ggtgcatgggtg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431275 12 + 26466322 ----ggtgcatgggta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758892 12 + 43916225 ----ggtgcatgggta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195525 12 + 75399963 ----gatgcatgggta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744467 12 - 7209941 ----ggtgcatgggta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486110 12 + 3907144 ----ggtgcatgggta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499403 12 - 44557958 ----ggtgcatgagga i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286406 12 - 5917169 ----ggtgcatgagga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250131 12 - 10531588 ----gatgcatgagga i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13672022 10 + 13852661 ctaggtttca------ i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904264 582 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=986926.000000 s hg38.chr16_GL383557v1_alt 16971 110 + 89672 ggattttaggttttgataatgtttcc-------------tgatctgggcactgctaacaaaagtattgtcagcctgtgaaaattcatccagctgcacgtttttatgatctgtgcacttttctg s panTro5.chr16 21442973 110 - 81586097 ggattttaggttttgataatgtttcc-------------tgatctgggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgcacgtttttatgatttgtgcacttttctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510056 110 - 90481686 ggattttaggttttgataatgtttcc-------------tgatctgggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgcacgtttttatgatttgtgcacttttctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742730 110 + 3010529 ggattttaggttttgataatgtttcc-------------tgatctgggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgcacgtttttatgatttgtgcacttttctg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328565 107 - 74971481 ggattttaggttt---taatgtttcc-------------tcatctgggcactgttaacaaaagtatgcccagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037866 107 - 78541002 ggattttaggttt---taatgtttcc-------------tcatctgggcactgttaacaaaagtatgcccagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431287 107 + 26466322 ggattttaggttt---taatgtttcc-------------tcatctgggcactgttaacaaaagtacgcccagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20758904 107 + 43916225 ggattttaagtta---taatgtttcc-------------tcacctgggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195537 107 + 75399963 ggattttaggttt---taatgtttcc-------------tcatctcggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744479 107 - 7209941 ggattttaggttt---taatgtttcc-------------tcatctgggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486122 107 + 3907144 ggattttaggttt---taatgtttcc-------------tcatctgggcactgctaacaaaagtatgctcagcctgtgaaaattcatccagctgtacatttttatgatttgtgcacttttcta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499415 110 - 44557958 ggattttaggttttgataacgtttct-------------tgatctgggcactgctaataaaagtatactcagcctgtggaaattcatccagctgtacatttttatgatttgtgcacttttctg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286418 110 - 5917169 ggattttaggttttgataatgtttct-------------tgatctgggcactgctaataaaagtatgctcagcctgtggaaattcatccagctgtacatttttatgatttgtacacttttctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250143 110 - 10531588 ggattttaggttttgataatgtttct-------------agatctgagcactgctaataaaagtatgcttagcctgtggaaattcatccagctgtacatttttatgatttgtgcacttttctg i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54904846 108 + 72247402 GGATTTTAggtcttgacaatgtttct-------------tgatctgggcactggttacaaaagtatgcttagtttgtgaaaactcatctagctttaca--tttatgatttgtgtacttttctg i micMur3.chr20 I 582 I 17 s otoGar3.GL873566 13672032 114 + 13852661 gtgtttcaggttt---cagtttcactctgctgtagctagtgacctgggcactgggtaaaaaagtgtactta----gtgaaaattcatctagctgtata--tttatgacttgcgtacttttctg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=153511.000000 s hg38.chr16_GL383557v1_alt 17081 23 + 89672 aaggtatgtaataaatcaaaaat s panTro5.chr16 21443083 23 - 81586097 aaggtatgtaataaatcaaaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510166 23 - 90481686 aaggtatgtaataaatcaaaaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742840 23 + 3010529 aaggtatgtaataaatcaaaaat i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328672 23 - 74971481 aaggtatgtaatatatcaaaaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037973 23 - 78541002 aaggtatgtaatatatcaaaaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431394 23 + 26466322 aaggtatgtaatatatcaaaaat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759011 23 + 43916225 aaggtatgtaatatatcaaaaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195644 19 + 75399963 aag----gtaatatatcaaaaat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744586 23 - 7209941 aaggtatgtaatatatcaaaaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486229 23 + 3907144 aaggtatgtaatatatcaaaaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499525 23 - 44557958 aaggtatgtaacaattcaaaaat i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286528 23 - 5917169 aaggtatgtaacaattcaaAAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250253 23 - 10531588 aaggtatgtaacaattcaaaaaT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13672146 10 + 13852661 --tatgcgtaAT----------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54904954 17 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=178000.000000 s hg38.chr16_GL383557v1_alt 17104 20 + 89672 tATTTTTAAAATACACATTT s panTro5.chr16 21443106 20 - 81586097 tATTTTTAAAATACACATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510189 20 - 90481686 tATTTTTAAAATACACATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742863 20 + 3010529 tATTTTTAAAATACACATTT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328695 20 - 74971481 tatttttaaaaTACACATTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21037996 20 - 78541002 tatttttaaaaTACACATTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431417 20 + 26466322 tatttttaaaaTACACATTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759034 20 + 43916225 tatttttaaaaTACACATTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195663 20 + 75399963 tatttttaaaaTACACATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744609 20 - 7209941 tatttttaaaaTACACATTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486252 20 + 3907144 tatttttaaaaTACACATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499548 20 - 44557958 tatttttaaaaTATACATTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286551 20 - 5917169 TATTTTTAAAATATACATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250276 20 - 10531588 TATTTTTTAAATATACATTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54904971 20 + 72247402 TATGTTTAAAATACAGATTT i micMur3.chr20 I 17 C 0 s otoGar3.GL873566 13672156 20 + 13852661 TTTTTTAAGGCTAGGCAATT i otoGar3.GL873566 C 0 I 41 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=169693.000000 s hg38.chr16_GL383557v1_alt 17124 18 + 89672 AAACTGAATCTCGACAAT s panTro5.chr16 21443126 18 - 81586097 AAACTGAATCTCGACAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510209 18 - 90481686 AAACTGAATCTCGACAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742883 18 + 3010529 AAACTGAATCTCGACAAT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328715 18 - 74971481 AAACTGAATCTCAACAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038016 18 - 78541002 AAACTGAATCTCAACAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431437 18 + 26466322 AAACTGAATCTCAACAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759054 18 + 43916225 AAACTGAATCTCAACAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195683 18 + 75399963 AAACTGAATCTCAACAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744629 18 - 7209941 AAACTGAATCTCAACAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486272 18 + 3907144 AAACTGAATCTCAACAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499568 18 - 44557958 AAACTGAATCTCAACAAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286571 18 - 5917169 AAACTGAATCTCAACAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250296 18 - 10531588 AAACTGAATCTCAACAAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54904991 18 + 72247402 AAACTGAACCTCAACAAT i micMur3.chr20 C 0 I 8 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13672176 41 + 13852661 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=9328.000000 s hg38.chr16_GL383557v1_alt 17142 15 + 89672 G--TCAATTTTCTTATT s panTro5.chr16 21443144 15 - 81586097 G--TCAATTTTCTTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510227 15 - 90481686 G--TCAATTTTCTTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742901 15 + 3010529 G--TCAATTTTCTTATT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328733 7 - 74971481 G--GCTG--------TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038034 7 - 78541002 G--GCTG--------TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431455 7 + 26466322 G--GCTG--------TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759072 7 + 43916225 G--GCTG--------TT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195701 7 + 75399963 G--GCTG--------TT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744647 7 - 7209941 G--GCTG--------TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486290 15 + 3907144 G--GCTGTTTTCTTATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499586 16 - 44557958 GATATCGTTTTTTT-TT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286589 15 - 5917169 G--ACCATTTTCTTATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250314 15 - 10531588 G--ACCATCTTCTTATT i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905009 8 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13672176 41 + 13852661 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=71638.000000 s hg38.chr16_GL383557v1_alt 17157 8 + 89672 TTCTTATC s panTro5.chr16 21443159 8 - 81586097 TTCTTATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510242 8 - 90481686 TTCTTATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742916 8 + 3010529 TTCTTATC i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328740 8 - 74971481 TTCTTATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038041 8 - 78541002 TTCTTATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431462 8 + 26466322 TTCTTATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759079 8 + 43916225 TTCTTATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195708 8 + 75399963 TTGTTATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744654 8 - 7209941 TTCTTATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486305 8 + 3907144 TTCTTATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499602 8 - 44557958 TTCTTATC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286604 8 - 5917169 TTCTTATC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250329 8 - 10531588 TTCTTATC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905017 8 + 72247402 TTCTCATT i micMur3.chr20 I 8 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916372 303 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13672176 41 + 13852661 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=10920.000000 s hg38.chr16_GL383557v1_alt 17165 1 + 89672 T s panTro5.chr16 21443167 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510250 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742924 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328748 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038049 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431470 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759087 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195716 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744662 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486313 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499610 1 - 44557958 T i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286612 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250337 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905025 1 + 72247402 T i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916675 1 + 9850184 T i proCoq1.NW_012152729v1 I 303 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13672176 41 + 13852661 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=486306.000000 s hg38.chr16_GL383557v1_alt 17166 50 + 89672 ACTTTATAATTGGTCAACATAAAATGTAAGATAAAATCAAATTTTGATTT s panTro5.chr16 21443168 50 - 81586097 ACTTTATAATTGGTCAACATAAAATGTAAGATAAAATCAAATTTTGATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510251 50 - 90481686 ACTTTATAATTGGTCAACATAAAATGTAAGATAAAATCAAATTTTGATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742925 50 + 3010529 ACTTTATAATTGGTCAACATAAAATGTAAGATAAAATCAAATTTTGATTT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328749 50 - 74971481 ACTTTATAATTGGTCAACATAAAACGTAAGACAAAATCAAATTTTGATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038050 50 - 78541002 ACTTTATAATTGGTCAACATAAAACGTAAGACAAAATCAAATTTTGATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431471 50 + 26466322 ACTTTATAATTGGTCAACATAAAACGTAAGACAAAATCAAATTTTGATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759088 50 + 43916225 ACTTTATAATTGGTCAACATAAAACGTAAGACAAAATCAAATTTTGATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195717 50 + 75399963 ACTTTATAATTGGTCAACATAAAACGTAAGACAAAATCAAATTTTGATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744663 50 - 7209941 ACTTTATAATTGGTCAACATAAAACGTAAGACAAAATCAAATTTTGATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486314 50 + 3907144 ACTTTATAATTGGTCAACATAAAATGTAAGAAAAAATCAAATTTTGACTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499611 50 - 44557958 ACTTTATAATTGGTCAACATGAAATGTTAGATAAAATGAAACTTTGATTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286613 50 - 5917169 ACTTTATAATTGGTCAACATGAAATGTTATATAAAATCAAATTTTGATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250338 50 - 10531588 ACTTTATAATTGGTCAACATGAAATGTTAGGTAAAATCAAATTTTGATTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905026 50 + 72247402 ACTTTATAACTAGTTAACATATAACCTTAGATAAAATCAAATTTTGATTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916676 50 + 9850184 ACTTTATAACTGGTCAACATATAAGCTTAGATAAAATCAAATTTTGATTT i proCoq1.NW_012152729v1 C 0 I 11 s otoGar3.GL873566 13672217 44 + 13852661 ATTTTA-AAATGTTTAAAATACAAATTT-----AAACTGAGCCTCAACAA i otoGar3.GL873566 I 41 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=54341.000000 s hg38.chr16_GL383557v1_alt 17216 6 + 89672 TGAAAA s panTro5.chr16 21443218 6 - 81586097 TGAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510301 6 - 90481686 TGAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 742975 6 + 3010529 TGAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21328799 6 - 74971481 TGAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038100 6 - 78541002 TGAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431521 6 + 26466322 TGAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759138 6 + 43916225 TGAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58195767 6 + 75399963 TGAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6744713 6 - 7209941 TGAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486364 6 + 3907144 TGAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499661 6 - 44557958 TGAAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286663 6 - 5917169 TGAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250388 6 - 10531588 TGAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905076 4 + 72247402 --AAAA i micMur3.chr20 C 0 I 2 s otoGar3.GL873566 13672261 4 + 13852661 --TAAG i otoGar3.GL873566 C 0 I 2 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=1791645.000000 s hg38.chr16_GL383557v1_alt 17222 233 + 89672 ATCTATACTTTgaccaggcgcg-gtggctcacgcctgtaatcccagcactttgggaggccaagg---caggcggatc-acctgaggtcaggagttcgaaaccagcctggccaacgtatagtgaaacgccatctctaccgaaaaa------atacaaaaattagctgggcgtggtggcacacgcctatagtccaagctactcgggaagccgaggcaggagaatcacttgaaccagtgaggtggag- s panTro5.chr16 21443224 233 - 81586097 ATCTATACTTTgaccaggcacg-gtggctcacgcctgtaatcccagcactttgggaggccaagg---caggcggatc-acctgaggtcaggagttcgaaaccagcctggccaacatatagtgaaacgccatctctaccgaaaaa------atacaaaaattagctgggcgtggtggcacacgcctatagtccaagctactcgggaagccgaggcaggagaatcacttgaaccggtgaggtggag- i panTro5.chr16 C 0 I 1 s panPan2.chr16 21510307 233 - 90481686 ATCTATACTTTgaccaggcgcg-gtggctcacgcctgtaatcccagcactttgggaggccaagg---caggcggatc-acctgaggtcaggagttcgaaaccagcctggccaacatatagtgaaacgccatctctaccgaaaaa------atacaaaaattagctgggcgtggtggcacacgcctatagtccaagctactcgggaagccgaggcagaagaatcacttgaaccggtgaggtggag- i panPan2.chr16 C 0 M 228 s gorGor5.CYUI01000018v1 742981 233 + 3010529 ATCTATACTTTgaccaggcgcg-gtggctcacgcctgtaatcccagcactttgggaggccaagg---caggcagatc-acctgaggtcaggagttcgaaaccagcctcgccaacatatagtgaaacgccatctctaccgaaaaa------atacaaaaattagctgggcgtggtggcacacacctatagtccaagctactcgggaagccgaggcaggagaatcacttgaaccggtgaggtggag- i gorGor5.CYUI01000018v1 C 0 I 1 s rheMac8.chr20 21328805 233 - 74971481 ATCTACATTTTgaccaggcatg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcggatc-acctgaggtcaggagtttgaaaccagcctggccaacatatagtaaaaccccatctctactgaaaaa------atacaaaaattagctgggtgtggtggcgcacgcctgtagtccaagctactcgggaagctgaggcaggagaatcacttgaacctgtgaggtggaa- i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21038106 233 - 78541002 ATCTACATTTTgaccaggcatg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcggatc-acctgaggtcaggagtttgaaaccagcctggccaacatatagtaaaaccccatctctactgaaaaa------atacaaaaattagctgggtgtggtggcgcacgcctgtagtccaagctactcgggaagctgaggcaggagaatcacttgaacctgtgaggtggaa- i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14431527 233 + 26466322 ATCTACATTTTgaccaggcgtg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcggatc-acctgaggtcaggagtttgaaaccagcctggccaacatatagtaaaaccccatctctactgaaaaa------atacaaaaattagctgggtgtggtggcgcacgcctgtagtccaagctactcgggaagctgaggcaggagaatcacttgaacctgtgaggtggaa- i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20759144 233 + 43916225 ATCTACATTTTgaccaggcgtg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcggatc-acctgaggtcaggagtttgaaaccagcctggccaacatatagtaaaaccccatctctactgaaaaa------atacaaaaattagctgggtgtggtggcgcacgcctgtagtccaagctactcgggaagctgaggcaggagaatcacttgaacaagtgaggtggaa- i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58195773 233 + 75399963 ATCTACATTTTgaccaggcgtg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcagatc-acctgaggtcaggagtttgaaatcagcctggccaacatatagtaaaaccccatctctactgaaaaa------atacaaaaattagctgggtgtggtagcgcatgcctgtagtccaagctactcgggaagctgaggcaggagaatcacttgaacctgtgagttggaa- i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6744719 233 - 7209941 ATCTACATTTTgaccaggcgtg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcggatc-acctgaggtcaggagtttgaaaccagcctggccaacatatagtaaaaccccatctctattgaaaaa------atacaaaaattagctgggtgtggtggcgcacgcctgtagtccaagctactcaggaagctgaggcaggagaatcacttgaaactgtgaggtggaa- i manLeu1.NW_012101698v1 C 0 I 1 s colAng1.NW_012123265v1 486370 233 + 3907144 ATCTACATTTTgaccaggcgtg-gtggctcatgcctgtaatcccagcactttggaaggccaagg---caggcggatc-acctgaggtcaggagtttgaaaccagcctggccaacatataataaaaccccatctctactgaaaaa------atacaaaaattagctgggcgtggtggcacacgcctgtagtccaagctactcgggaagctgaggcaggagaatcacttgaacctgtgaggtggaa- i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21499667 236 - 44557958 ATCTATACTTTggccaggtgca-gtgtctcatgcctgtaatcacagcactttgggaggccaagg---tgagcagatc-acctgaggtcaggaatttgagaccagcctggccaacatatagtgaaaccccgtctctactaaaaaaaaa---atacaaaaattagttgggcacggtggcaaatgcctgtactcccagctacttggaaagcagaggcaggacaattgcttgaacctgggaggtggag- i calJac3.chr20 C 0 I 1 s cebCap1.NW_016107433v1 3286669 239 - 5917169 ATCTATACTTTggccaggtgca-gtggctcacgcctataatcccagcactttgggaggccaagg---tgagcagatc-acctgaggtcaggaatttgagaccatcttggccaatatacagtgaaaccccgtctctactaaaaaaaaaaatacaaaaaaattagttgggcatggtggcgcatgcctgtagtcccagctacttgggaagctgaggcaggacaactgcttgaacctgggaggtggag- i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9250394 238 - 10531588 ATCTATACTTTggctgggtgca-gtggctcacgcctgtaatcccagtactttgggaggccaagg---tgagcagatc-acctgaggtcaggaatttgagaccattctggccaacatatagtgaaatcccatttctactaaaaaaaaaaa-atacaaaaattagttgggcgtggtggctcatgcctgtagtcccagctcctttggaagatgaggcaggacaactgcttgaacctgggaggtggag- i aotNan1.NW_018500622v1 C 0 I 1 s otoGar3.GL873566 13672267 203 + 13852661 ATCT---TATTggctctgtgcatgtggctcaagt----------------------ggctaaggcaccagccacatagacctaaggtggcgggttcgaatccaacctgggctgccaaaaacaatg----atggctgc-------------aaccaaaaaatagccaggtgttgtggcgggcacctgtggtcccagctacttaggaggcggaggcaggagactcgcttaagcccaggagttggagg i otoGar3.GL873566 I 2 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905080 2 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=477496.000000 s hg38.chr16_GL383557v1_alt 17455 77 + 89672 ttgcagtgagccgatattgcgccactgcactccagcctgaacgacagagcaagacaccatctctcaaaaaaaaaaaa s panTro5.chr16 21443458 77 - 81586097 ttgcagtgagccgatattgcgccactgcactccagcctgaacgacagagcaagacatcatctcTCaaaaaaaaaaaa i panTro5.chr16 I 1 C 0 s gorGor5.CYUI01000018v1 743215 77 + 3010529 ttgcagtgagcagatattgcgccactgcactccagcctgaacgacagagcaagacaccacctctcaaaaaaaaaaaa i gorGor5.CYUI01000018v1 I 1 C 0 s rheMac8.chr20 21329039 77 - 74971481 ttgcagtgagctgatatcgcgccactgcactccagcctgaacgacagagcaagacaccgtctcTCAaaataaataaa i rheMac8.chr20 I 1 I 4 s macFas5.chr20 21038340 77 - 78541002 ttgcagtgagctgatatcgcgccactgcactccagcctgaacgacagagcaagacaccgtctctcaaaataaataaa i macFas5.chr20 I 1 I 4 s macNem1.NW_012011355v1 14431761 77 + 26466322 ttgcagtgagctgatatcgcgccactgcactccagcctgaacgacagagcaagacaccgtctctcaaaataaataaa i macNem1.NW_012011355v1 I 1 I 4 s cerAty1.NW_011999143v1 20759378 77 + 43916225 ttgcagtgagctgatatcgcgccactgcactccagcctgaatgacagagcaaggcaccgtctctcaaaataaataaa i cerAty1.NW_011999143v1 I 1 I 4 s chlSab2.chr5 58196007 77 + 75399963 ttgcagtgagctgatatcgtgccactgcactccagcctgaacgacagagcaagacaccgtctctcaaaataaattaa i chlSab2.chr5 I 1 I 25 s manLeu1.NW_012101698v1 6744953 77 - 7209941 ttgcagtgagctgatatcgcgccactgcactacagcctgaacgacagagcaagacaccgtctctcaaaataaataaa i manLeu1.NW_012101698v1 I 1 I 4 s colAng1.NW_012123265v1 486604 77 + 3907144 ttgcagtgagctgatattgcgccactgcactccagcctgaacgacacagcaagacacggtctctcaaaataaataaa i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21499904 77 - 44557958 ttgaagtgagccgatatcgaaccactgcatttcagcctcggcaacgtagcaggacttcatttctcaaagaaaaaaaa i calJac3.chr20 I 1 C 0 s cebCap1.NW_016107433v1 3286909 77 - 5917169 ttgcagtgagcccagctcctgccattgcactccagcctgggcgacatagcaggacttcatttctcaaagaaaaaaaa i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9250633 77 - 10531588 ttgcagtgagcctatatcgagccactgcacttcagcctgggtgacatagcaggacttcatttctcaaagaaaaaaaa i aotNan1.NW_018500622v1 I 1 C 0 s otoGar3.GL873566 13672470 71 + 13852661 ttgctgtgagc----gtgatgccatggcactctacccaaggggacagcttaaggctc--tttctcaaaaaaaaaaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905080 2 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=2251.000000 s hg38.chr16_GL383557v1_alt 17532 5 + 89672 aaaag s panTro5.chr16 21443535 5 - 81586097 aaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743292 5 + 3010529 aaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s otoGar3.GL873566 13672541 5 + 13852661 aaaaG i otoGar3.GL873566 C 0 I 61 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905080 2 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9250710 0 - 10531588 C e cebCap1.NW_016107433v1 3286986 0 - 5917169 C e panPan2.chr16 21510540 228 - 90481686 M e macNem1.NW_012011355v1 14431838 4 + 26466322 I e rheMac8.chr20 21329116 4 - 74971481 I e macFas5.chr20 21038417 4 - 78541002 I e colAng1.NW_012123265v1 486681 0 + 3907144 C e manLeu1.NW_012101698v1 6745030 4 - 7209941 I e chlSab2.chr5 58196084 25 + 75399963 I e cerAty1.NW_011999143v1 20759455 4 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499981 0 - 44557958 C e nomLeu3.chr2 53851147 4509 + 163208435 M a score=-17557.000000 s hg38.chr16_GL383557v1_alt 17537 17 + 89672 aaa--------------------------------gaaagaaaaGAAAA s panTro5.chr16 21443540 49 - 81586097 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaagaaaagaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743297 25 + 3010529 aga------------------------aaaagaaagaaagaaaagaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329120 21 - 74971481 ---------------------------taaattaattaagtaaataaa- i rheMac8.chr20 I 4 C 0 s macFas5.chr20 21038421 21 - 78541002 ---------------------------ttaattaattaagtaaataaa- i macFas5.chr20 I 4 C 0 s macNem1.NW_012011355v1 14431842 21 + 26466322 ---------------------------ttaattaattaagtaaataaa- i macNem1.NW_012011355v1 I 4 C 0 s cerAty1.NW_011999143v1 20759459 21 + 43916225 ---------------------------ttaattaaataagtaaataaa- i cerAty1.NW_011999143v1 I 4 C 0 s manLeu1.NW_012101698v1 6745034 21 - 7209941 ---------------------------ttaattaaataagtaaataaa- i manLeu1.NW_012101698v1 I 4 C 0 s colAng1.NW_012123265v1 486681 16 + 3907144 ---------------------------TTAATTAAAT-----AATAAA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499981 2 - 44557958 ----------------------------------------------aa- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286986 2 - 5917169 ----------------------------------------------aa- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250710 2 - 10531588 ----------------------------------------------aa- i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905080 2 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e chlSab2.chr5 58196084 25 + 75399963 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13672546 61 + 13852661 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=12102.000000 s hg38.chr16_GL383557v1_alt 17554 4 + 89672 GAAA s panTro5.chr16 21443589 4 - 81586097 gaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743322 4 + 3010529 gaaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329141 4 - 74971481 taaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038442 4 - 78541002 taaA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431863 4 + 26466322 taaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759480 4 + 43916225 taaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196109 4 + 75399963 taaa i chlSab2.chr5 I 25 C 0 s manLeu1.NW_012101698v1 6745055 4 - 7209941 taaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486697 4 + 3907144 TAAA i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905080 2 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9250712 0 - 10531588 C e cebCap1.NW_016107433v1 3286988 0 - 5917169 C e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21499983 0 - 44557958 C e otoGar3.GL873566 13672546 61 + 13852661 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=21848.000000 s hg38.chr16_GL383557v1_alt 17558 6 + 89672 AGGAAA- s panTro5.chr16 21443593 6 - 81586097 aGGAAA- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743326 6 + 3010529 aggaaa- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329145 6 - 74971481 AGGAAA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038446 6 - 78541002 AGGAAA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431867 6 + 26466322 AGGAAA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759484 6 + 43916225 AGGAAA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196113 6 + 75399963 AGGAAA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745059 6 - 7209941 AGGAAA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486701 6 + 3907144 AGGAAA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499983 3 - 44557958 ---aaC- i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13672607 6 + 13852661 -AAAAAC i otoGar3.GL873566 I 61 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e micMur3.chr20 54905080 2 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9250712 0 - 10531588 C e cebCap1.NW_016107433v1 3286988 0 - 5917169 C e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=76876.000000 s hg38.chr16_GL383557v1_alt 17564 10 + 89672 ATCTATACTT s panTro5.chr16 21443599 10 - 81586097 ATCTATACTT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743332 10 + 3010529 aTCTATACTT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329151 10 - 74971481 ATCTATACTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038452 10 - 78541002 ATCTATACTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431873 10 + 26466322 ATCTATACTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759490 10 + 43916225 ATCTATACTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196119 10 + 75399963 ATCTATACTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745065 10 - 7209941 ATCTATACTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486707 10 + 3907144 ATCTATACTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499986 10 - 44557958 ATCTTTACTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286988 10 - 5917169 TTCTTTATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250712 9 - 10531588 -TCTTTACTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905082 10 + 72247402 ATCTATACTT i micMur3.chr20 I 2 C 0 s otoGar3.GL873566 13672613 10 + 13852661 ATTTATAGCT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916726 11 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=122475.000000 s hg38.chr16_GL383557v1_alt 17574 11 + 89672 TAAAGCCTCTA s panTro5.chr16 21443609 11 - 81586097 TAAAGCCTCTA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743342 11 + 3010529 TAAAGCCTCTA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329161 11 - 74971481 TAAAGCCTCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038462 11 - 78541002 TAAAGCCTCTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431883 11 + 26466322 TAAAGCCTCTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759500 11 + 43916225 TAAAGCCTCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196129 11 + 75399963 TAAAGCCTCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745075 11 - 7209941 TAAAGCCTCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486717 11 + 3907144 TAAAGCCTCTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21499996 11 - 44557958 TAAAGCCTCTA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3286998 11 - 5917169 TAAAGCCTCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250721 11 - 10531588 TAAAGCCTCTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905092 11 + 72247402 TAAAGCTTCTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916737 11 + 9850184 TAAAGCCTCTA i proCoq1.NW_012152729v1 I 11 C 0 s otoGar3.GL873566 13672623 11 + 13852661 TAAAGCCTCTA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80430769 1018 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=301875.000000 s hg38.chr16_GL383557v1_alt 17585 31 + 89672 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA s panTro5.chr16 21443620 31 - 81586097 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743353 31 + 3010529 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329172 31 - 74971481 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038473 31 - 78541002 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431894 31 + 26466322 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759511 31 + 43916225 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196140 31 + 75399963 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745086 31 - 7209941 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486728 31 + 3907144 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500007 31 - 44557958 AGAATTCCTCTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287009 31 - 5917169 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AAGAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250732 31 - 10531588 AGAATTCCTTTCATATT------------------------------------------------------TTGAAAG-------------------------------AATAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905103 31 + 72247402 AGAATTTCTTTCATATT------------------------------------------------------CTGAAAG-------------------------------AATAAAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2916748 31 + 9850184 AGAATTGCTTTCATATT------------------------------------------------------CTGAAAG-------------------------------AATAAAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13672634 116 + 13852661 AGAATTCCTTTTACATTTTATGTTCTggcgcggcacctatagcacagtggttatggcaccagtcacatgcaccgaaggtggagggttcaaactcggatggggcaagctaaacaaca i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80431787 31 + 88915250 AAAATTCCTTTCATATT------------------------------------------------------CTGCAAG-------------------------------AATAAAA i canFam3.chr5 I 1018 I 54 e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=10920.000000 s hg38.chr16_GL383557v1_alt 17616 1 + 89672 A s panTro5.chr16 21443651 1 - 81586097 A i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743384 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329203 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038504 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431925 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759542 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196171 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745117 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486759 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500038 1 - 44557958 A i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287040 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250763 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905134 1 + 72247402 A i micMur3.chr20 C 0 I 497 s proCoq1.NW_012152729v1 2916779 1 + 9850184 A i proCoq1.NW_012152729v1 C 0 I 105 s otoGar3.GL873566 13672750 1 + 13852661 a i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=836544.000000 s hg38.chr16_GL383557v1_alt 17617 131 + 89672 -TGCAAggcca------------ggcgcagtgtggctca-tgcctgtaatcccagcacgttgggaggctgaggcaggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa s panTro5.chr16 21443652 131 - 81586097 -TGCAAggccc------------ggcgcagtgtggctca-tgcctgtaatcccagcacgttgtgaggctgaggcaggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743385 131 + 3010529 -TGCAAggccg------------ggtgcagtgtggctca-tgcctgtaatcccagcacgttgggaggctgaggcaggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21329204 131 - 74971481 -TGGAAggccg------------gatgctgtgtggctca-tgcctgtaatcccagcactttgggaggccaagatgggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038505 131 - 78541002 -TGGAAggccg------------gatgctgtgtggctca-tgcctgtaatcccagcactttgggaggccaagatgggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14431926 131 + 26466322 -TGGAAggccg------------gatgctgtgtggctca-cgcctgtaatcccagcactttgggaggccaagatgggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759543 131 + 43916225 -TGCAAggccg------------gatgctgtgtggctca-cgcctgtaatcccagcactttgggaggccaagatgggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196172 131 + 75399963 -TGCAAggccg------------gatgctgtgtggctca-cgcctgtaatcccagcactttgggaggccaatgtgggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------catcatggtgaaaccccatctc------tactaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745118 131 - 7209941 -TGCAAggccg------------gatgctgtgtggctca-cgcctgtaatcccagcactttgggaggccaagatgggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccccatctc------tactaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486760 132 + 3907144 -TGCAAggccg------------ggtgctgtgtggctcattgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgagatcaggagttcaagcc---------------cagcctggc-------------caacatggtgaaaccctatctc------tactaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500039 129 - 44557958 -TTTAAggcca------------ggtgca--gtagctca-tgtctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcaagtc---------------caggctggc-------------caaaatggtgaagccccatctc------tactaaaa i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287041 128 - 5917169 -TTCAAggcca------------ggtaca--gtagctca-tgcctgtaatccccgaactttggggggccaaggcatgt-gatcacctgaggtcaggagttcaagtc---------------cagcctggc-------------caaaatggtgaagccccatctc------tactaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9250764 128 - 10531588 -TTCAGggcga------------ggcgca--gtagctca-tgcctgtaatcccagcactttgggagg-cgaggcgggtggatcacctgaggtcaggagttcaagtc---------------cagcctggc-------------caaaatggtgaagccccatctc------tactaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13672751 178 + 13852661 tgacaattccaccaaaaaatagctgagcatcatggcagg-cgcctatagtcccagctacttgggaggctgaggcaagagactcccttaagcccaagagtttgaggttgttgtgagctgtgacaccatggcactttaccaagggcaacatagggagactctgtctcaaaaaataataata i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e nomLeu3.chr2 53851147 4509 + 163208435 M a score=867760.000000 s hg38.chr16_GL383557v1_alt 17748 106 + 89672 ataca---aaaaattagttgggcatggtggcaggcgcctgtagtcccagctaccagggatgctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag s panTro5.chr16 21443783 106 - 81586097 ataca---aaaaattagttgggcatggtggcaggcgcctgtagtcccagctactagggatgctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743516 106 + 3010529 ataca---aaaaattagttggacatggtggcaggcacctgtagtcccagctactagggatgctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855656 106 + 163208435 ataca---aaaaattagttgggcatggtggcgggcgcctgtagtcccagctactagggatgctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtaag i nomLeu3.chr2 M 4509 C 0 s rheMac8.chr20 21329335 106 - 74971481 ataca---aaaaattagttgggcatgggggcgggcacctgtagtctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggctgcagtgag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038636 106 - 78541002 ataca---aaaaattagttgggcatgggggcgggcacctgtagtctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggctgcagtgag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432057 106 + 26466322 ataca---aaaaattagttgggcatgggggcgggcacctgtagtctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759674 106 + 43916225 ataca---aaaaattagttgggcatggggacgggcacctgtagtctcagctacttgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196303 106 + 75399963 ataca---aaaaattagttgggcatgggggcaggcacctgtagtctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745249 106 - 7209941 ataca---aaaaattagttgggcatgggggcgggcacctgtagtctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486892 106 + 3907144 ataca---aaaaattagttgggcatgggggcgggcacctgtagtctcagctactcaggagactgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500168 106 - 44557958 attaa---aaaaattagttaggcgtggtggcaggtgcctgtagtcctagctactcaggaggctgaggcagaagaatcacttgaccctggaaggtggaggttgtagtgag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287169 106 - 5917169 attta---aaaaattagttgggcgtggtggcaggcacctgtagccctagctactcaggaggctgaggcagaagaatcgcttgactctgggaggcggaggttgcagtgag i cebCap1.NW_016107433v1 C 0 I 7 s aotNan1.NW_018500622v1 9250892 106 - 10531588 attaa---caaaattagttgggcatggtggcgggcatctgtagtcctagctactcaggaggctgaggcagaagaatcgcttgactctgggaggcggaggttgcagtgag i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13672929 107 + 13852661 ataaaTAGaaagagtagcagggtgtcatggcaggtgcctgtagtcccagct-cttgggaggctgaggccag-ggattacttgagcccaagaatttgaggttgctgtgag i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=42390.000000 s hg38.chr16_GL383557v1_alt 17854 7 + 89672 ctgagat s panTro5.chr16 21443889 7 - 81586097 ctgagat i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743622 7 + 3010529 ctgagat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855762 7 + 163208435 ccgagat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329441 7 - 74971481 ccaagat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038742 7 - 78541002 ccaagat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432163 7 + 26466322 ccaagat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759780 7 + 43916225 ccaagat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196409 7 + 75399963 ccaagat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745355 7 - 7209941 ccaagat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 486998 7 + 3907144 ccgagat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500274 7 - 44557958 cagagat i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9250998 7 - 10531588 cagagat i aotNan1.NW_018500622v1 C 0 I 32 s otoGar3.GL873566 13673036 7 + 13852661 ctatgat i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3287275 7 - 5917169 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=127518.000000 s hg38.chr16_GL383557v1_alt 17861 24 + 89672 tgcgccactgcactccagcctggg s panTro5.chr16 21443896 24 - 81586097 tgcgccactgcactccagcctggg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743629 24 + 3010529 tgcgccactgcactccagcctggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855769 24 + 163208435 cgcgccactgcactccaggatggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329448 24 - 74971481 cgcgccactgcactccagcctggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038749 24 - 78541002 cgcgccactgcactccagcctggg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432170 24 + 26466322 cgcgccactgcactccagcctggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759787 24 + 43916225 cgcgccactgcactccagcctggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196416 24 + 75399963 cgcgccactgcactccagtctggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745362 24 - 7209941 cgcgccactgcactccagcctggg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487005 24 + 3907144 cgtgccactgcactccagcctgtg i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13673043 21 + 13852661 ---gccatagcactctacccaggg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9251005 32 - 10531588 I e cebCap1.NW_016107433v1 3287275 7 - 5917169 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21500281 0 - 44557958 C a score=213753.000000 s hg38.chr16_GL383557v1_alt 17885 43 + 89672 caacaagagcaaaactctgtctcaa---------------------------------------------------aaaaaataagta-------------------------------------------tataaa s panTro5.chr16 21443920 43 - 81586097 caacaagagcaaaactctgtctcaa---------------------------------------------------aaaaaataagta-------------------------------------------tataaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743653 43 + 3010529 caacaagagcaaaactctgtctcaa---------------------------------------------------aaaaaataagta-------------------------------------------tataaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855793 43 + 163208435 caacaagagtaaaactccgtctcaa---------------------------------------------------aaaaaataagta-------------------------------------------aataaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329472 43 - 74971481 caacaagggcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aataaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038773 43 - 78541002 caacaagggcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aataaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432194 43 + 26466322 caacaagggcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aataaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759811 43 + 43916225 caacaagggcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aataaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196440 43 + 75399963 caacaagagcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aataaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745386 43 - 7209941 caacaagggcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aataaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487029 43 + 3907144 caacaagagcaaaactctgtctcaa---------------------------------------------------aaacaataagta-------------------------------------------aagaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500281 32 - 44557958 caacaagagcaaaactccgtctcaa---------------------------------------------------aaaaaag------------------------------------------------------ i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287282 32 - 5917169 caacaagagcaaaactctgtctcaa---------------------------------------------------aaaaaag------------------------------------------------------ i cebCap1.NW_016107433v1 I 7 C 0 s otoGar3.GL873566 13673064 136 + 13852661 tgac-agagtgagattctgtctcaaCAGCCACAAAAAAAGTTACAGAGCAGACTTCTGCCATTACCCCTCTAAGAGAAATAATGAGGATCTCTAAGCTAAAAGAACATTATCAGTCAAGCCAGGGCAAAGTAATAAA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9251005 32 - 10531588 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=36512.000000 s hg38.chr16_GL383557v1_alt 17928 4 + 89672 aata s panTro5.chr16 21443963 4 - 81586097 aata i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743696 4 + 3010529 aata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855836 4 + 163208435 aata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329515 4 - 74971481 aata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038816 4 - 78541002 aata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432237 4 + 26466322 aata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759854 4 + 43916225 aata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196483 4 + 75399963 aata i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745429 4 - 7209941 aata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487072 4 + 3907144 aata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500313 4 - 44557958 aaca i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287314 4 - 5917169 aata i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251037 4 - 10531588 aata i aotNan1.NW_018500622v1 I 32 C 0 s otoGar3.GL873566 13673200 4 + 13852661 AATA i otoGar3.GL873566 C 0 I 24 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e panPan2.chr16 21510540 228 - 90481686 M e saiBol1.JH378225 6302411 285 + 6628207 I a score=266575.000000 s hg38.chr16_GL383557v1_alt 17932 34 + 89672 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTT--A s panTro5.chr16 21443967 34 - 81586097 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTT--A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510772 33 - 90481686 AAAATGCAGCCAATTCCTTA--TTAAC-------------AAGGCTT--A i panPan2.chr16 M 228 C 0 s gorGor5.CYUI01000018v1 743700 34 + 3010529 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTT--A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855840 34 + 163208435 aaaaTGCAGCCAACTCCTCA--TTAAC------------AAAGGCTT--A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329519 36 - 74971481 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTTAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038820 36 - 78541002 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTTAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432241 36 + 26466322 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTTAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759858 36 + 43916225 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTTAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196487 36 + 75399963 aaaaTGCAGCCAATTCCTTT--TTAAC------------AAAGGCTTAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745433 36 - 7209941 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTTAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487076 36 + 3907144 aaaaTGCAGCCAATTCCTTA--TTAAC------------AAAGGCTTAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500317 34 - 44557958 aaaaTGCAGCAAATTCCTTA--TTAAC------------AAAGGCTTA-- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287318 34 - 5917169 aaaGTGCAGCAAATTCCTTA--TTAAC------------AAAGGCTTA-- i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9251041 34 - 10531588 aaaaTGCAGCAAATTCCTTA--TTAAC------------AAAGGCTTA-- i aotNan1.NW_018500622v1 C 0 I 1 s otoGar3.GL873566 13673228 47 + 13852661 AAGATGTATCCCAGGTCTAAACTTAACACTCATAACCGTAAAGAATA--- i otoGar3.GL873566 I 24 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=40269.000000 s hg38.chr16_GL383557v1_alt 17966 6 + 89672 TAGAAG- s panTro5.chr16 21444001 6 - 81586097 TAGAAG- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510805 6 - 90481686 CAGAAG- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743734 6 + 3010529 CAGAAG- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855874 6 + 163208435 CAGAAG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329555 6 - 74971481 CAGAAG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038856 6 - 78541002 CAGAAG- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432277 6 + 26466322 CAGAAG- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759894 6 + 43916225 CAGAAG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196523 6 + 75399963 CAGAAG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745469 6 - 7209941 CAGAAG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487112 6 + 3907144 CAGAAG- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500351 6 - 44557958 CAGAAG- i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13673275 6 + 13852661 -AGAAAG i otoGar3.GL873566 C 0 I 3 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9251075 1 - 10531588 I e cebCap1.NW_016107433v1 3287352 1 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=1138653.000000 s hg38.chr16_GL383557v1_alt 17972 209 + 89672 A-TAtttt-----cttttttttt--------------------------------ttttctttctgagatggagttttgctcttgttgcccaggctggagtgcaatggagtgatcttggctcacagcaacctccaccttccaggttcaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcaccaccacgcccggctaattttgtatttttagtagagatagggttt-ctcc s panTro5.chr16 21444007 208 - 81586097 A-TAtttt-----cttttttttt--------------------------------ttt-ctttctgagatggagttttgctcttgttgcccaggctggagtgcaatggagtgatcttggctcaccgcaacctccaccttccaggttcaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcccggctaattttgtatttttagtagagacagggttt-ctcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21510811 207 - 90481686 ATTAtttt-----cttttttttt--------------------------------t---ctttctgagatggagttttgctcttgttgcccaggctggagtgcaatggagtgatcttggctcactgcaacctccaccttccaggttcaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcccggctaattttgtatttttagtagagacagggttt-ctcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743740 208 + 3010529 A-CAtttt-----cttttttttt--------------------------------ttt-ctttctgagatggagttttgctcttgttgcccaggctggagtgcaatggagtgatcttggctcaccgcaacctccaccttccaggttcaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttagtagagacagggttt-ctcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53855880 205 + 163208435 A-TATATA-----TATAtttttt------------------------------------ctttctgagatggagttttgctcttgttgcccaggctggagtgcagtggcgcgatctcggcttactgcaacctccaccttccaggttcaagcaattctcctgtctcagcttcccgagtagctgggattacaggcatgcgccatcacgcccggctaattttgtgtgtttagtagagacagggttt-ctcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329561 201 - 74971481 A-------------ttttttttt--------------------------------ttt-tcttctgagatggagttttgctcttgttgcccaggctagagtgcgatggagtgatcttggctcactataacctccgccttccaggtacaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagaaggagttt-ctcc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21038862 201 - 78541002 A-------------ttttttttt--------------------------------ttt-ccttctgagatggagttttgctcttgttgcccaggctagagtgcgatggagtgatcttggctcactataacctccgccttccaggtacaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagaaggagttt-ctcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432283 201 + 26466322 A-------------ttttttttt--------------------------------ttt-tcttctgagatggagttttgctcttgttgcccaggctagagtgcgatggagtgatcttggctcactataacctccgccttccaggtacaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagaaggagttt-ctcc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20759900 204 + 43916225 A-----tt-----tttttttttt--------------------------------ttt-tcttctgagatggagttttgctcttgttgcccaggctagagtgtgatggagtgatcttggctcactataacctccgccttccaggtacaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagaaggggttt-ctcc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196529 202 + 75399963 A-------------ttttttttt--------------------------------ttt-tcttctgagatggagttttgctcttgttgcccaggctagagtgcgatggagtgatcttggctcactataacctccgccttccaggtacaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagacggggtttgctcc i chlSab2.chr5 C 0 I 11 s manLeu1.NW_012101698v1 6745475 201 - 7209941 A-------------ttttttttt--------------------------------ttt-tcttctgagatggagttttgctcttgttgcccaggctagagtgcgatggagtgatcttggctcactataacctccgccttccaggtacaagcgattctcctgcctcagcttcctgagtagctgggattacaggcatgcgccaccacgcctggctaattttgtatttttaatagagaaggggttt-ctcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487118 201 + 3907144 A-------------ttttttttt--------------------------------ttt-tcttctgagatggagttctaatcttgttgcccaggctagagtgcgatggagtgatcttggctcactgtaacctctgccttccaggtacaagcgattctcctgcctcagcttcctgattagctgggattacaggcatgcgccaccacgcccagctaattttgtatttttaatagagacagggttt-ctcc i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13673284 206 + 13852661 -AGATTTTCTCAACTTtttttttacagtttttggccagggctgggtttgaacccgtca-cctctggagacagagtcttact-ttgttacccttggtagaatgcagt-----------ggctcacagtaacctccagctcttgggcttaggcgattctcttgcctcagcctcccgaatagctgggactacag--atgc-ccacaatgcctgccacccttggtat------------------------- i otoGar3.GL873566 I 3 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9251075 1 - 10531588 I e cebCap1.NW_016107433v1 3287352 1 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21500357 0 - 44557958 C a score=136780.000000 s hg38.chr16_GL383557v1_alt 18181 28 + 89672 atgttggtcaggctggtctcgaactccc- s panTro5.chr16 21444215 28 - 81586097 atgttggtcaggctggtctcaaactccc- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511018 28 - 90481686 atgttggtcaggctggtctcaaactccc- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743948 28 + 3010529 atgttggtcaggctggtctcgaactccc- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856085 28 + 163208435 atgttggtcaggctggtctcgaactccc- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329762 28 - 74971481 atgttggtcaggctggtctcgaactcct- i rheMac8.chr20 C 0 I 10 s macFas5.chr20 21039063 28 - 78541002 atgttggtcaggctggtctcgaactcct- i macFas5.chr20 C 0 I 10 s macNem1.NW_012011355v1 14432484 28 + 26466322 atgttggtcaggctggtctcgaactcct- i macNem1.NW_012011355v1 C 0 I 10 s cerAty1.NW_011999143v1 20760104 28 + 43916225 atgttggtcaggctggtctcgaactcct- i cerAty1.NW_011999143v1 C 0 I 10 s manLeu1.NW_012101698v1 6745676 28 - 7209941 atgttggtcaggctggtctcgaactcct- i manLeu1.NW_012101698v1 C 0 I 10 s colAng1.NW_012123265v1 487319 28 + 3907144 atgttggtcaggctggtctccaactcct- i colAng1.NW_012123265v1 C 0 I 10 s otoGar3.GL873566 13673490 23 + 13852661 ------atggggccagtgccctactcact i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9251075 1 - 10531588 I e cebCap1.NW_016107433v1 3287352 1 - 5917169 I e chlSab2.chr5 58196731 11 + 75399963 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21500357 0 - 44557958 C a score=312588.000000 s hg38.chr16_GL383557v1_alt 18209 63 + 89672 ga----------tccac--ccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggccT s panTro5.chr16 21444243 73 - 81586097 gacctcaggtgatccac--ccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcctggccT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511046 73 - 90481686 gacctcaggtgatccac--ccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgtgcctggccT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 743976 73 + 3010529 aacctcaggtgatccac--ccaacttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggccT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856113 73 + 163208435 gacctcaggtgatccac--ccgcttcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcctggccG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329800 63 - 74971481 ----------gatctgc--ctgcctcctcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccC i rheMac8.chr20 I 10 C 0 s macFas5.chr20 21039101 63 - 78541002 ----------gatctgc--ctgcctcctcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccC i macFas5.chr20 I 10 C 0 s macNem1.NW_012011355v1 14432522 63 + 26466322 ----------gatctgc--ctgcctccgcctcccaaagtgctgggattacaggcgtgagccactgcacccagccC i macNem1.NW_012011355v1 I 10 C 0 s cerAty1.NW_011999143v1 20760142 63 + 43916225 ----------gatctgc--ctgcctccgcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccC i cerAty1.NW_011999143v1 I 10 C 0 s chlSab2.chr5 58196742 63 + 75399963 ----------gatctgc--ctgcctccgcctcccaaagtgctgggattacaggcatgagccaccgcacccagccC i chlSab2.chr5 I 11 C 0 s manLeu1.NW_012101698v1 6745714 63 - 7209941 ----------gatctgc--ctgcctccgcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccC i manLeu1.NW_012101698v1 I 10 C 0 s colAng1.NW_012123265v1 487357 63 + 3907144 ----------gatctgc--ccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccagccC i colAng1.NW_012123265v1 I 10 C 0 s otoGar3.GL873566 13673513 39 + 13852661 ----------gagccacaaatgctgcccCTTCTCAA-----------CACtgaagtaggc--------------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80431818 54 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9251075 1 - 10531588 I e cebCap1.NW_016107433v1 3287352 1 - 5917169 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21500357 0 - 44557958 C a score=36357.000000 s hg38.chr16_GL383557v1_alt 18272 5 + 89672 AGAAA s panTro5.chr16 21444316 5 - 81586097 AGAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511119 5 - 90481686 AGAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744049 5 + 3010529 AGAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856186 5 + 163208435 CGAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329863 5 - 74971481 AGAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039164 5 - 78541002 AGAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432585 5 + 26466322 AGAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20760205 5 + 43916225 AGAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196805 5 + 75399963 AGAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745777 5 - 7209941 AGAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487420 5 + 3907144 AGAAG i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3287353 5 - 5917169 AGAAG i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9251076 5 - 10531588 AGAAG i aotNan1.NW_018500622v1 I 1 C 0 s otoGar3.GL873566 13673552 2 + 13852661 --aa- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80431872 5 + 88915250 AGAAG i canFam3.chr5 I 54 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I e calJac3.chr20 21500357 0 - 44557958 C a score=698735.000000 s hg38.chr16_GL383557v1_alt 18277 77 + 89672 ATATTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTACTGGAGAGAAGAGTAA s panTro5.chr16 21444321 77 - 81586097 ATATTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTAATGGAGAGAAGAGTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511124 77 - 90481686 ATATTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTAATGGAGAGAAGAGTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744054 77 + 3010529 ATATTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCAAACAGTATATCTACTGGAGAGAAGAGTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856191 77 + 163208435 ATATTTTCTCGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTACTGGAGAGAAGAGTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329868 74 - 74971481 ATACTTTCTTGTGGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTACTGGAGAGAAGAG--- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039169 74 - 78541002 ATACTTTCTTGTGGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTACTGGAGAGAAGAG--- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432590 74 + 26466322 ATACTTTCTTGTGGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTACTGGAGAGAAGAG--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20760210 74 + 43916225 ATACTTTCTTGTGGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATCTGCTGGAGAGAAGAG--- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196810 74 + 75399963 ATATTTTCTTGTGGAGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTGTATCTACTGGAGAGAAGAG--- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745782 74 - 7209941 ATACTTTCTTGTGGGGAAATTAGAGACTAATTACCCACATATTGATCAAATAGTATATCTACTGGAGAGAAGAG--- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487425 74 + 3907144 ATATTTTCTTGTGGGGAAATTAGAGACTAATTACCCACATTTTGATCAAATAGTATATCTACTGGAGAGAAGAG--- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500357 76 - 44557958 ATACTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCAAATAGTATATTTACTGTAGAGAAGAGTA- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287358 77 - 5917169 ATACTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATTAAATAGTATATTTACTGGCGAGAAGAGTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251081 77 - 10531588 ATACTTTCTTGTAGGGAAATTAGAGACTAATTACCCACATCTTGATCTAATAGTATATTTACTGGAGAGAAGAGTAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673554 21 + 13852661 atgtttcttggacaggacata-------------------------------------------------------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80431877 74 + 88915250 GTATTTTCCTGTAGGGAGATTGGAGATTAATTACCTACATCCTTCCCAAATAGTATATTGACTGGAGAGATGAG--- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916780 105 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=337709.000000 s hg38.chr16_GL383557v1_alt 18354 33 + 89672 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA s panTro5.chr16 21444398 33 - 81586097 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511201 33 - 90481686 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744131 33 + 3010529 TAATGATG----GCTAAACAAAAAGCTAAAAGGTAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856268 33 + 163208435 TAATGATC----GCCAAACAAAAAGCTAAAAGGTATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329942 33 - 74971481 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039243 33 - 78541002 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432664 33 + 26466322 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20760284 33 + 43916225 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196884 33 + 75399963 TAATGATT----GCTAAACAAAAAGCTAAAAGGTAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745856 33 - 7209941 TAATGATC----GCTAAACAAAAAGCTAAAAGGTAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487499 33 + 3907144 TAATGGTC----GCTAAACAAAAAGCTAAAAGGTAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500433 31 - 44557958 --ATGATC----ACTAAAAAAAAAGCTAAAAGGTGGA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287435 33 - 5917169 TGATGATC----ACTAAACAAAAAGCTAAAAGGTAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251158 33 - 10531588 TGATGATC----ACTAAACAAAAAGCTAAAAGGTGGA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2916885 33 + 9850184 TAATGATT----GCTAAACAAAAAGTTAAAAGGTAGA i proCoq1.NW_012152729v1 I 105 C 0 s otoGar3.GL873566 13673575 30 + 13852661 caatgcttaaccatgacagaaaaagttTCA------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80431951 24 + 88915250 TAATGACT----GTTAAACAAAAGTTTA--------- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=1151561.000000 s hg38.chr16_GL383557v1_alt 18387 124 + 89672 AGGAggcagggaacagtgactcatgcctgtaattccagctccttgggaggctgaggcagaaggatcacttgagcccaagagttcgagaccaccctaggcaacatagtgagaaccctgtctctac s panTro5.chr16 21444431 124 - 81586097 AGGAggcagggaacagtgactcatgcctgtaattccagctccttgggaggctgaggcagaaggatcacttgagcccaggagttcgagaccaccctgggcaacatagtgagaaccctgtctctac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511234 124 - 90481686 AGGAggcagggaacagtgactcatgcctgtaattccagctccttgggaggctgaggcagaaggatcacttgagcccaggagttcgagaccaccctgggcaacatagtgagaaccctgtctctac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744164 124 + 3010529 AGCAggcagggaacagtgactcatgcctgtaattccagctccttgggaggctgaggcagaaggatcacttgagcccaggaattcgagaccaccctgggcaacatagtgagaaccctgtctctac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856301 123 + 163208435 AGCAGGCA-GGAATAgtggctcatgcctgtaattccagctccttgggaggctgaggtggaaggatcgcttgagcccaggagttggagaccaccctgggcaacatagtgagaaccctgtctctac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21329975 124 - 74971481 AGCAggcagggaacagtggctcacgcctgtaattccagctccttgggaggctgaggtggaaggctaacttgagcccagaagtttgagaccaccctgggcaacatagtgagaaccctgtctctac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039276 124 - 78541002 AGCAggcagggaacagtggctcacgcctgtaattccagctccttgggaggctgaggtggaaggctcacttgagcccagaagtttgagaccaccctgggcaacatagtgagaaccctgtctctac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432697 124 + 26466322 AGCAggcagggaacagtggctcacgcctgtaattccagctccttgggaggctgaggtggaaggctcacttgagcccagaagtttgagaccaccctgggcaacatagtgagaaccctgtctctac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20760317 124 + 43916225 AGCAggcagggaacagtggctcacgcctgtaattccagctccttgggaggctgaggtggaaggctcacttgagcccaggagtttgagaccaccctgggcaacatagtgagaaccctgtctctac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58196917 124 + 75399963 AGCAggcagggaacagtggctcacgcctgtaattccagctccttgggaggctgaggtggaaggctcacttgagcccaggagtttgagaccaccctgggcaacatagtgagaaccctgtctctac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6745889 124 - 7209941 AGCAggcagggaacagtggctcacgcctgtaattccagctccttgggaggctgaggtggaaggctcacttgagcccaggagtttgagaccaccctgggcaacatagtgagaaccctgtctctac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487532 124 + 3907144 AGCAggcagggaacagtggctcatgcctgtaattccagctccttgggaggctgaggtggaaggctcacttgagcccaggagtttgagaccaccctgggcaacacagtgagaaccctgtctctac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500464 123 - 44557958 AGCAGGTAgggaacagtggctcatacctgtaattccagctacttgggaggctcagatgggaggatcatttgagcctagaagtttgagacca-tctgggcaacacagtgagaaccctctctctac i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287468 123 - 5917169 AGCAGGTAgggaacagtggctcatgcctgtaattccagctactagggaggctgaggcgggaggatcatttgagcctagaagtttgagacca-actgggcaacacaatgagaaccctctctctac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251191 123 - 10531588 AGCAGGTAgggaacagtggctcatgcctgtaattccagctacttgggaggctgaggcgggaggatcatttgggcctagaagtttgagacca-tctaggcaacacagtgagaaccctctctctac i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673605 122 + 13852661 GCCCggctgggcacaatggctcatacctataatcttagcactctaaaagaccacagtgggtggactacttgagctcaggagttccagatcagcctgagca--agaggaagaccccacgcttcac i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80431975 111 + 88915250 gggacgcctgg----gtggctcagcggtttagtgcctgctttt-----ggcccagg--acatgatc-ctggagtccggggatggagtcccgcattgggctccct-gtgtggagcctgcttctcc i canFam3.chr5 C 0 I 82 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=1332914.000000 s hg38.chr16_GL383557v1_alt 18511 156 + 89672 t-aaaa----aaactttttttaattagccaa--gtggtggcacgctcctgtaattctcgtttcttgggaggctaaggcgggaaaatctcctgagccc-aggagtt-a----gaggatgctgtgagctatgatcgcaccactgcactccagccagggtagacagagcaag s panTro5.chr16 21444555 154 - 81586097 t-aaaa----aaactttttttaattagccaa--gtggtggcacactcctgtaattctcgtttcttgggaggctaaggcgggaaaatctcctgagccc-aggagtt-a----gaggatgctgtgagctatgatcgcaccactgcactccagccagggtagacag--caag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511358 154 - 90481686 t-aaaa----aaactttttttaattagccaa--gtggtggcacactcctgtaattctcgtttcttgggaggctaaggcgggaaaatctcctgagccc-aggagtt-a----gaggatgctgtgagctatgatcgcaccactgcactccagccagggtagacag--caag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744288 157 + 3010529 t-aaaa----aaactttttttaattagccaa--gtggtggcacgctcctgtaattctcgtttcttgggaggctaaggcgggaaaatctcctgagccc-aggagttaa----gaggatgctgtgagctatgattgcaccactgcactccagccagggtagacagagcaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856424 155 + 163208435 t-aaaa----aaaatttttttaattagccaa--gtggtggcacgctcctgtaatccttgtttcttgggaggctaaggcgggaagacctcctgagccc-aggagtt-a----gaggatgctgtgagctatgatcgcaccactgcactccagccagggta-acagagcaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330099 154 - 74971481 t-aaaa----aaa-tttttttaattagccaa--gtggtggcatgcacctgtaatcctcgtttcttgggaggttaaggcaggaagatctcctgagccc-aagagtt-a----caggatgctgtgagctatgatcgcaccacagcactccagcctgggtg-acagagcaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039400 154 - 78541002 t-aaaa----aaa-tttttttaattagccaa--gtggtggcatgcacctgtaatcctcgtttcttgggaggttaaggcaggaagatctcctgagccc-aagagtt-a----caggatgctgtgagctatgatcgcaccacagcactccagcctgggtg-acagagcaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14432821 154 + 26466322 t-aaaa----aaa-tgtttttaattagccaa--gtggtggcatgcacctgtaatcctcgtttcttgggaggttaaggcaggaagatctcctgagccc-aagagtt-a----caggatgctgtgagctatgatcgcaccactgcactccagcctgggtg-acagagcaag i macNem1.NW_012011355v1 C 0 I 5736 s cerAty1.NW_011999143v1 20760441 154 + 43916225 t-aaaa----aaa-tgtttttaattagccaa--gtggtggcatgcacctgtaatcctcatttcttgggaggttaaggcaggaagatctcctgagccc-aagagtt-a----caggatgctgtgagctatgatcgcaccactgcactccagcctgggtg-acagagcaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197041 154 + 75399963 t-aaaa----aaa-tttttttaattagccaa--gtggtggcatgcacctgtaatcctcgtttcttgggaggttaaggcaggaagatctcctgagccc-aaaagtt-a----caggatgctgtgagctatgatcgcaccactgcactccagcctgggtg-acagagcaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746013 154 - 7209941 t-aaaa----taa-tttttttaattagccaa--gtggtggcatgcacctgtaatccttgtttcttgggcggttaaggcaggaagatctcctgagccc-aagagtt-a----caggatgctgtgagctatgatcgcaccactgcactccagcctgggtg-acagagcaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487656 155 + 3907144 taaaaa----aaa-tttttttaattagccaa--gtggtggcatgcacctgtaatcctcgtttcttgggaggttaaggcaggaagatctcctgagccc-aagagtt-a----caggatgctgtgagctatgatcacaccactgcactccagcctgggtg-acagagcaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500587 157 - 44557958 t-aaaa----aaaatttgtttaattagccaggtgtggtggcacaaacctgtaatactagtttcttgggagactaaggtagaaggatctcctgagccc-agaagtt-a----gaggatgctgtgagctatgattgcaccactgcattctagcctgggtg-acagagcaag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287591 159 - 5917169 taaaaa----aaaatttgtttaattagccaggtgtggtggcacacacctgtaatactagtttcttggggggctaaggtaggaggatctcctgagcccggggggtt-a----gaggatgctgcgagctatgactgcaccactgcattccagcctgggtg-acagagggag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251314 158 - 10531588 taaaaa----aaaatttgtttaattagccaggtgtggtggcacacacctgtaatactagtttcttgggaggctaaagtaggaggatctcctgagccc-aggaatt-a----gaggatgctgtgagctatgattgcaccactgcattccagcctgggtg-acagagtgag i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673727 156 + 13852661 t-aaaaatagaaa--------aatcagctaggaatggtagcacacacctttactcccagctactcaggaggctgaggcaggaggattactgaagccc-atgagct-acctggaggttgc-gtgtgctatgatcatgccactgcactctagctggggtg-agagagcaag i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80432086 82 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=88485.000000 s hg38.chr16_GL383557v1_alt 18667 17 + 89672 gcccAGCCTTGCCTTTG- s panTro5.chr16 21444709 17 - 81586097 gcccAGCCTTGCCTTTG- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511512 17 - 90481686 gcccAGCCTTGCCTTTG- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744445 17 + 3010529 gcccAGACTTGCCTTTG- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856579 17 + 163208435 gcccggtctTGCCTTTA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330253 17 - 74971481 gccTGGCCTTGCCTTTA- i rheMac8.chr20 C 0 I 306 s macFas5.chr20 21039554 17 - 78541002 gccTGGCCTTGCCTTTA- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760595 17 + 43916225 gccTGGCCTTGCCTTTa- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197195 17 + 75399963 gccTGGCCTTGCCTTTA- i chlSab2.chr5 C 0 I 309 s manLeu1.NW_012101698v1 6746167 17 - 7209941 gccTGGCCTTGCCTTTa- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487811 17 + 3907144 gtccAGCCTTGCCTTTA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500744 12 - 44557958 -----acccggtcttta- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287750 12 - 5917169 -----acccagtcttta- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251472 12 - 10531588 -----acccggtctTTA- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673883 13 + 13852661 -----accttgcctcaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80432086 82 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=27902.000000 s hg38.chr16_GL383557v1_alt 18684 3 + 89672 ACA s panTro5.chr16 21444726 3 - 81586097 ACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511529 3 - 90481686 ACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744462 3 + 3010529 ACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856596 3 + 163208435 ACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330576 3 - 74971481 aca i rheMac8.chr20 I 306 C 0 s macFas5.chr20 21039571 3 - 78541002 ACA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760612 3 + 43916225 aca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197521 3 + 75399963 aca i chlSab2.chr5 I 309 C 0 s manLeu1.NW_012101698v1 6746184 3 - 7209941 aca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 487828 3 + 3907144 ACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500756 3 - 44557958 aca i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287762 3 - 5917169 aca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251484 3 - 10531588 ACA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673896 3 + 13852661 acg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80432086 82 + 88915250 I e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=77571.000000 s hg38.chr16_GL383557v1_alt 18687 8 + 89672 ACAACAAC s panTro5.chr16 21444729 8 - 81586097 ACAACAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511532 8 - 90481686 ACAACAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744465 8 + 3010529 ACAACAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856599 8 + 163208435 ACAACAAC i nomLeu3.chr2 C 0 I 1 s rheMac8.chr20 21330579 8 - 74971481 acaacaac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039574 8 - 78541002 ACAACAAC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760615 8 + 43916225 acaacaac i cerAty1.NW_011999143v1 C 0 I 309 s chlSab2.chr5 58197524 8 + 75399963 acaacaac i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6746187 8 - 7209941 acaacaac i manLeu1.NW_012101698v1 C 0 I 310 s colAng1.NW_012123265v1 487831 8 + 3907144 ACAACAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500759 8 - 44557958 acaacaag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287765 8 - 5917169 acaacaac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251487 8 - 10531588 ACAACAAC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673899 8 + 13852661 acaaaaac i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80432168 8 + 88915250 ACAAAAGT i canFam3.chr5 I 82 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=2655.000000 s hg38.chr16_GL383557v1_alt 18695 1 + 89672 -A s panTro5.chr16 21444737 1 - 81586097 -A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511540 1 - 90481686 -A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744473 1 + 3010529 -A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856608 1 + 163208435 -A i nomLeu3.chr2 I 1 C 0 s rheMac8.chr20 21330587 1 - 74971481 -a i rheMac8.chr20 C 0 I 2 s macFas5.chr20 21039582 1 - 78541002 -A i macFas5.chr20 C 0 I 311 s cerAty1.NW_011999143v1 20760932 1 + 43916225 -a i cerAty1.NW_011999143v1 I 309 I 2 s chlSab2.chr5 58197533 1 + 75399963 -a i chlSab2.chr5 I 1 I 1 s manLeu1.NW_012101698v1 6746505 1 - 7209941 -a i manLeu1.NW_012101698v1 I 310 I 1 s colAng1.NW_012123265v1 487839 1 + 3907144 -A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500767 1 - 44557958 -a i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287773 1 - 5917169 -a i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251495 1 - 10531588 -A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673907 1 + 13852661 -a i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80432176 1 + 88915250 T- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=-505.000000 s hg38.chr16_GL383557v1_alt 18696 1 + 89672 -A s panTro5.chr16 21444738 1 - 81586097 -A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511541 1 - 90481686 -A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744474 1 + 3010529 -A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856609 1 + 163208435 -A i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 487840 1 + 3907144 -A i colAng1.NW_012123265v1 C 0 I 305 s calJac3.chr20 21500768 1 - 44557958 -a i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287774 1 - 5917169 -a i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251496 1 - 10531588 -A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673908 1 + 13852661 -a i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80432177 1 + 88915250 T- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e rheMac8.chr20 21330588 2 - 74971481 I e macFas5.chr20 21039583 311 - 78541002 I e manLeu1.NW_012101698v1 6746506 1 - 7209941 I e chlSab2.chr5 58197534 1 + 75399963 I e cerAty1.NW_011999143v1 20760933 2 + 43916225 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=20010.000000 s hg38.chr16_GL383557v1_alt 18697 2 + 89672 AA s panTro5.chr16 21444739 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511542 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744475 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856610 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330590 2 - 74971481 aa i rheMac8.chr20 I 2 C 0 s macFas5.chr20 21039894 2 - 78541002 aa i macFas5.chr20 I 311 C 0 s cerAty1.NW_011999143v1 20760935 2 + 43916225 aa i cerAty1.NW_011999143v1 I 2 C 0 s chlSab2.chr5 58197535 2 + 75399963 aa i chlSab2.chr5 I 1 C 0 s manLeu1.NW_012101698v1 6746507 2 - 7209941 aa i manLeu1.NW_012101698v1 I 1 C 0 s colAng1.NW_012123265v1 488146 2 + 3907144 aa i colAng1.NW_012123265v1 I 305 C 0 s calJac3.chr20 21500769 2 - 44557958 aa i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287775 2 - 5917169 aa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251497 2 - 10531588 GA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13673909 2 + 13852661 aa i otoGar3.GL873566 C 0 T 813 s canFam3.chr5 80432178 2 + 88915250 AA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I a score=60019.000000 s hg38.chr16_GL383557v1_alt 18699 7 + 89672 AAGTGGG s panTro5.chr16 21444741 7 - 81586097 AAGTGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511544 7 - 90481686 AAGTGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744477 7 + 3010529 AAGTGGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856612 7 + 163208435 AAGTGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330592 7 - 74971481 AAGTCGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039896 7 - 78541002 AAGTGGG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760937 7 + 43916225 AAGTGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197537 7 + 75399963 AAGTGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746509 7 - 7209941 AAGTGGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488148 7 + 3907144 aaGTAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500771 7 - 44557958 aGGTGGG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287777 7 - 5917169 aGGTGGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251499 7 - 10531588 AGGTGGG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80432180 7 + 88915250 AAGTAGG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905135 497 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916918 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=392787.000000 s hg38.chr16_GL383557v1_alt 18706 37 + 89672 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA s panTro5.chr16 21444748 37 - 81586097 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511551 37 - 90481686 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744484 37 + 3010529 AGCAAAGAG----TTCCTACATTC-CCATCATTTCCTAACAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856619 37 + 163208435 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330599 37 - 74971481 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039903 37 - 78541002 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760944 37 + 43916225 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197544 37 + 75399963 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746516 37 - 7209941 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCCAACAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488155 37 + 3907144 AGCAAAGAG----TTCCTACATTC-CCATCACTTCCTAACAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500778 37 - 44557958 TGCAAAGAG----TTCTTACGTTC-CCATCACTTCCTACCAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287784 37 - 5917169 AGCAAAGAG----TTCCTACGTTC-CCATCACTTCCTAACAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251506 37 - 10531588 AGCAAAGAG----TTCCTACGTTC-CCATCACTTCCTAACAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905632 37 + 72247402 AGCAAGGAG----TCGCTACATTC-CCCTCACTTCCTAACAA i micMur3.chr20 I 497 C 0 s proCoq1.NW_012152729v1 2916918 37 + 9850184 AGCAAGGAG----TTGCTACATTC-CCATCACTTCCTAACAA i proCoq1.NW_012152729v1 C 0 I 420 s canFam3.chr5 80432187 42 + 88915250 AGCTCAGAGTGGCTTCTCATATTCGTTAACACTTTGTCATAT i canFam3.chr5 C 0 C 0 e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=70076.000000 s hg38.chr16_GL383557v1_alt 18743 8 + 89672 GCACATAG-- s panTro5.chr16 21444785 8 - 81586097 GCACATAG-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511588 8 - 90481686 GCACATAG-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744521 8 + 3010529 GCACATAG-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856656 8 + 163208435 GCACATAG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330636 8 - 74971481 GCACATAG-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039940 8 - 78541002 GCACATAG-- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760981 8 + 43916225 GCACATAG-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197581 8 + 75399963 GCACATAG-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746553 8 - 7209941 GCACATAG-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488192 8 + 3907144 GCACATAG-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500815 8 - 44557958 ACACATAG-- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287821 8 - 5917169 GCACATAG-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251543 8 - 10531588 GCACATAG-- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54905669 8 + 72247402 GCATATAG-- i micMur3.chr20 C 0 I 376 s canFam3.chr5 80432229 8 + 88915250 --GCTTAACT i canFam3.chr5 C 0 C 0 e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916955 420 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=61807.000000 s hg38.chr16_GL383557v1_alt 18751 8 + 89672 CTGAGTAT s panTro5.chr16 21444793 8 - 81586097 CTGAGTAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511596 8 - 90481686 CTGAGTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744529 8 + 3010529 CTGAGTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856664 8 + 163208435 CTGAATAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330644 8 - 74971481 CTGAGTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039948 8 - 78541002 CTGAGTAT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760989 8 + 43916225 CTGAGTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197589 8 + 75399963 CTAAGTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746561 8 - 7209941 CTGAGTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488200 8 + 3907144 CTGAGTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500823 8 - 44557958 CTGAGAAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287829 8 - 5917169 CTGAGTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251551 8 - 10531588 CTGAGTAT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80432237 8 + 88915250 GTGGATAT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905677 376 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e proCoq1.NW_012152729v1 2916955 420 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=57548.000000 s hg38.chr16_GL383557v1_alt 18759 8 + 89672 AGGACCTC s panTro5.chr16 21444801 8 - 81586097 AGGACCTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511604 8 - 90481686 AGGACCTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744537 8 + 3010529 AGGACCTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856672 8 + 163208435 TGGACCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330652 8 - 74971481 AGAACATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039956 8 - 78541002 AGGACATC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20760997 8 + 43916225 AGGACATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197597 8 + 75399963 TGGACATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746569 8 - 7209941 AGGACATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488208 8 + 3907144 AGGACATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500831 8 - 44557958 AGGATCTC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287837 8 - 5917169 AGGAACTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251559 8 - 10531588 AGGATCTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2917375 8 + 9850184 AGGATCTG i proCoq1.NW_012152729v1 I 420 C 0 s canFam3.chr5 80432245 8 + 88915250 AGGACCTG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54905677 376 + 72247402 I e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=785263.000000 s hg38.chr16_GL383557v1_alt 18767 70 + 89672 AATGGAA----AGGATTTCATGAACGTACAGTGGGTTATTTTTAATAATACATTGGTTGCATTTAAGTATTTTT s panTro5.chr16 21444809 70 - 81586097 AATGGAA----AGGATTTCATGAACGTACAGTGGGTTATTTTTAATAATACATTGGTTGCATTTCAGTATTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511612 70 - 90481686 AATGGAA----AGGATTTCATGAACGTACAGTGGGTTATTTTTAATAATACATTGGTTGCATTTAAGTATTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744545 70 + 3010529 AATGGAA----AGGATTTCATGAACGTACAGTGGGTTATTTTTAATAATACATTGGTTGCATTTAAGTATTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856680 70 + 163208435 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTAATAATACATTGGTTGCATTTAAGTATTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330660 70 - 74971481 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTAGATAATACATTGGTTGCATTTAAGTATTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21039964 70 - 78541002 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTGATAATACATTGGTTGCATTTAAGTATTTTT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761005 70 + 43916225 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTGATAATACATTGGTTGCATTTAAGTATTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197605 70 + 75399963 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTGATAATACATTGGTTGCATTTAAGTATTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746577 70 - 7209941 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTGATAATACATTGGTTGCATTTAAGTATTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488216 70 + 3907144 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTGATAATACATTGGTTGCATTTAAGTATTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500839 70 - 44557958 AATGGAA----AGGATTTCATAAACATACAATGGGTTATTTTTAATAATACATTGGTTGCATTTAAATATTTTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287845 70 - 5917169 AATGGAA----AGGACTTCATGAACATACAATGGGTTATTTTTAATAATACATTGGTTGCATTTAAATATTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251567 70 - 10531588 AATGGAA----AGGATTTCATGAACATACAATGGGTTATTTTTAATAATACATTGGTTGCATTTAAATATTTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906053 70 + 72247402 AATGGAA----GGGATTTCATGGACATACAATGGGTTACTTTTAATAATACATTGGCTACATTTAAGTATTTTT i micMur3.chr20 I 376 C 0 s proCoq1.NW_012152729v1 2917383 70 + 9850184 AATGGAA----AGGATTTCATAGACATACAATGGGTTTCTTTTAATAATACATTGGCTACATTTAAGTATTTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80432253 74 + 88915250 AATAGAAAGACAGGATTTCATAGATATATGATAGATTCTTTTTCACAACACATGGGTTGCATGTTAGTATTTTT i canFam3.chr5 C 0 I 207 e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=278694.000000 s hg38.chr16_GL383557v1_alt 18837 24 + 89672 AAGAAGCATTATTAGAAACTTCTG s panTro5.chr16 21444879 24 - 81586097 AAGAAGCATTATTAGAAACTTCTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511682 24 - 90481686 AAGAAGCATTATTAGAAACTTCTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744615 24 + 3010529 AAGAAGCATTATTAGAAACTTCTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856750 24 + 163208435 AAGAAGCATTATTAGAAACTTCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330730 24 - 74971481 AAGAAGCATTATTAGAAACTTATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040034 24 - 78541002 AAGAAGCATTATTAGAAACTTATG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761075 24 + 43916225 AAGAAGCATTATTAGAAACTTATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197675 24 + 75399963 AAGAAGCATTATTAGAAACTTATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746647 24 - 7209941 AAGAAGCATTATTAGAAACTTATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488286 24 + 3907144 AAGAAGCATTATTAGAAACTTCTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500909 24 - 44557958 AAGAAGCATTATTAGAAACTTCTG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287915 24 - 5917169 AAGAAGCATTATTAGAAACTTCTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251637 24 - 10531588 AAGAAGCATTATTAGAAACTTCTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906123 24 + 72247402 AGGAAGCATTATTAGAAACTTCAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2917453 24 + 9850184 AGGAAGCATTATTAGAAACTTCAG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80432534 24 + 88915250 AAGAAGCATTATTAGAAACTTAAG i canFam3.chr5 I 207 C 0 e mm10.chr8 22438256 6457 - 129401213 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=311673.000000 s hg38.chr16_GL383557v1_alt 18861 30 + 89672 TTTTATTTCAGGAAAAGTTATCTATTCCAC s panTro5.chr16 21444903 30 - 81586097 TTTTATTTCAGGAAAAGTTATCTATTCCAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511706 30 - 90481686 TTTTATTTCAGGAAAAGTTATCTATTCCAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744639 30 + 3010529 TTTTATTTCAGGAAAAGTTATCTATTCCAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856774 30 + 163208435 TTTTATTTGAGGAAAAGTTATCTATCCCAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330754 30 - 74971481 TTTTATTTGAGGAAAAGTTATTTATCCCAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040058 30 - 78541002 TTTTATTTGAGGAAAAGTTATTTATCCCAC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761099 30 + 43916225 TTTTATTTGAGGAAAAGTTATTTATCCCAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197699 30 + 75399963 TTTTATTTGAGGAAAAGTTATTTATCCCAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746671 30 - 7209941 TTTTATTTGAGGAAAAGTTATTTATCCCAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488310 30 + 3907144 TTTTATTTGAGGAAAAGTTATTTATCCCAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500933 30 - 44557958 TTTTATATGAGGAAAAGTTATCTATCCCAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3287939 28 - 5917169 TTTTATATGAGG--AAGTTATCTATCCCAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251661 30 - 10531588 TTTTATATGAGGAAAAGTTATCTATCCCAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906147 30 + 72247402 TTTTATTTGGAGAAAAGATATCTATCCTAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2917477 30 + 9850184 TTTTATTTGGGGGAAAGATATCTATCCTAC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22444713 29 - 129401213 TTTTGTTTTAGTAAAAGTTACATATTCAT- i mm10.chr8 I 6457 C 0 s canFam3.chr5 80432558 29 + 88915250 TTTTATTTGAGGAAAAGTTACTTATCCCA- i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302411 285 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1582345.000000 s hg38.chr16_GL383557v1_alt 18891 136 + 89672 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--CTTCTTTGTCTGGGATC-ACTAGGGGGCCATATGTGAGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGAAGGAAAGAGAAAATGGGAAAG s panTro5.chr16 21444933 136 - 81586097 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTTTGTCTGGGATC-ACTAGGGGGCCATATGTGAGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGAAAGAAAGAGAAAATGGGAAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511736 136 - 90481686 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTTTGTCTGGGATC-ACTAGGGGGCCATATGTGAGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGAAAGAAAGAGAAAATGGGAAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744669 136 + 3010529 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTTTGTCTGGGATC-ACTAGGGGGCCATATGTGAGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGAAGGAAAGAGAAAATGGGAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856804 145 + 163208435 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTTTGCTTGGGATC-ACTAGGGGGCCATATGTGAGAAATATGAAAGAATATGAAAGAAGCAGGTTGGAAATGCCTAATGTaggaaagag-gaatgggaaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330784 139 - 74971481 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTT----TGGGATC-ACTAGGGGGCCATATGTGAgaaatatga---aatatgaaagaagcaggttggaaatgcctaatgtaggaaagaggaaatgggaaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040088 139 - 78541002 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTT----TGGGATC-ACTAGGGGGCCATATGTGAgaaatatga---aatatgaaagaagcaggttggaaatgcctaatgtaggaaagaggaaatgggaaag i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761129 139 + 43916225 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTT----TGGGATC-ACTAGGGGGCCATATGTGAgaaatatga---aatatgaaagaagcaggttggaaatgcctaatgtaggaaagaggaaatgggaaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197729 139 + 75399963 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCCTAGA--ATTCTT----TGGGATC-ACTAGGGGGCCATATGTGAgaaatatga---aatatgaaagaagcaggttggaaatgcctaatgtaggaaagaggaaatgggaaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746701 139 - 7209941 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTT----TGGGATC-ACTAGGGGGTCATATGTGAgaaatatga---aatatgaaagaagcaggttggaaatgcctaatgtaggaaagaggaaatgggaaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488340 139 + 3907144 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAACCTTAGA--ATTCTT----TGGGATC-ACTAGGGGGCCATATGTGAgaaatatga---aatatgaaagaagcaggttggaaatgtctaatgtaggaaagaggaaatgggaaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21500963 136 - 44557958 CTTTTCCTCTTTCAAATCTATCTAAAATTACCAGAACCTTAGA--ATTTTTTGTTTGGGATC-ACTAGGGGACCATATGTGTGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGTAGGAAAGAGGAAATGGGAAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302696 120 + 6628207 ccTTCCTCTTTTCAAATCTAT----------------CTTAGA--ATTTTTTGTTTGGGATC-ACTAGGGGACCATATGTGTGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGTAGGAAAGAGGAAATGGGAAAG i saiBol1.JH378225 I 285 C 0 s cebCap1.NW_016107433v1 3287967 136 - 5917169 CTTTTCTTCTTTCAAATCTATCTAAAGTTGCCAGAACCTTAGA--AATTTTTGTTTGGGATC-ACTAGGGAACCATATGTGTGA----------AATATGAAAGAAGCAGGTTGGAAATGCCTAATGTATGAAAGAGGAAATGGGAAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251691 136 - 10531588 CTTTTCCTCTTTCAAATCTATCTAAAGTTACCAGAACCTTAGA--ATTTTTTGTTTGGGATC-ACTAGGGGACCATATGTGTGA----------ACTATGAAAGAAGCAGGTTGGAAATGCCTAATGTAGGAAAGAGGAAATGGGAAAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906177 138 + 72247402 CTTTTCCTCTTTCAAATCCATCTAAAGTTACCAGAATCTTAAAACACTTTTTGTTTGGGATC-ACCAGAGGGCCATATGTGTGA----------AATATGAAAGAAGTTGGTTGGAGAAGCCTAATGCAGGGAAGAGGAAATGGGAAAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2917507 133 + 9850184 CTTTTCCTCTTTCAAATCCATCTAAAATTACCAGAATCTTAAA--ACTCTTCGTTTGAAATC-ACCAGAGGGCCATATGGGTGA----------AATATGA---AAGTAGGTTGGAAATGTCTAATGCAGGGAAGAGGAAATGGGAAAG i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22444742 117 - 129401213 CTTTCTCTCTTCCAAATCCATCGCTTGTTACAGG--TTTTAAT--ATTCCTTGT-TTGAATC-AGT-GGCAGCCACA-GTGTAA----------AATGT-----------GTTGT---TTCAGGATGTAGGGAAGAGAAAATGGAAAGA i mm10.chr8 C 0 C 0 s canFam3.chr5 80432587 130 + 88915250 CTTTTCCTTTCTCAAACTCATCTA--GTTACCAGAACCTTAAA--ATTGT--GTTTGGGATCAACTAGGGG---ATATGTGTGA----------ACTATGAAAGAAGTAGCTTGGAAATGCTAGATCCAGGGAAGAGGAAATGGGAAAG i canFam3.chr5 C 0 I 733 e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=8889.000000 s hg38.chr16_GL383557v1_alt 19027 6 + 89672 A-------------AAATA- s panTro5.chr16 21445069 6 - 81586097 A-------------AAATA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511872 6 - 90481686 A-------------AAATA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744805 6 + 3010529 A-------------AAATA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856949 6 + 163208435 a-------------aaata- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330923 17 - 74971481 aAAAT--ATCACCCAAATA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040227 17 - 78541002 aAAAT--ATCACCCAAATA- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761268 17 + 43916225 aAAAT--ATCACCCAAATA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197868 17 + 75399963 aAAAT--ATCACCCAAATA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746840 17 - 7209941 aAAAT--ATCACCCAAATA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488479 17 + 3907144 aAAAT--ATCACCCAAATA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501099 18 - 44557958 AAAATT-ATCACCCAAATA- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302816 19 + 6628207 AAAATTAATCACCCAAATA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288103 18 - 5917169 AAAATT-ATCACCCAAATA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251827 18 - 10531588 AAAATT-ATCACCCAAATA- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906315 6 + 72247402 A-------------AAATA- i micMur3.chr20 C 0 I 23 s proCoq1.NW_012152729v1 2917640 6 + 9850184 C-------------AAATA- i proCoq1.NW_012152729v1 C 0 I 23 s mm10.chr8 22444859 6 - 129401213 T-------------TAATA- i mm10.chr8 C 0 I 1 s canFam3.chr5 80433450 6 + 88915250 --------------AAAAAA i canFam3.chr5 I 733 C 0 e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=309842.000000 s hg38.chr16_GL383557v1_alt 19033 30 + 89672 GAAGAAAAAGCCATTATGTCATGCCCACTA s panTro5.chr16 21445075 30 - 81586097 GAAGAAAAAGCCATTATGTCACGCCCACTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511878 30 - 90481686 GAAGAAAAAGCCATTATGTCACGCCCACTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744811 30 + 3010529 GAAGAAAAAGCCATTATGTCACGCCCACTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856955 30 + 163208435 gaagaaaaagCCACTATGTCACACCCAGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330940 30 - 74971481 GAAGAAAAAGCCATTATGTCACATCCACCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040244 30 - 78541002 GAAGAAAAAGCCATTATGTCACATCCACCA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761285 30 + 43916225 GAAGAAAAAGCCATTATGTCACATCCACCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197885 30 + 75399963 GAAGAAAAAGCCATTATGTCACATCCACCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746857 30 - 7209941 GAAGAAAAAGCCATTATGTCACATCCACCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488496 30 + 3907144 GAAGAAAAAGCCATTATGTCACATCCACCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501117 30 - 44557958 AAAGAAAAAGCCATTATGTCACATCGATCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302835 30 + 6628207 AAAGAAAAAGCCATTATGTCACATCCACCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288121 30 - 5917169 AAAGAAAAAGCCATTATGTCACATCCACCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9251845 30 - 10531588 AAAGAAAAAGCCATTATGTCACATCCACCA i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22444866 30 - 129401213 AGATAAAAGGCTGTGATGTCACACTCACCA i mm10.chr8 I 1 C 0 s canFam3.chr5 80433456 29 + 88915250 GAAAAAAAAGCCATGA-GTCATACCCATCA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54906321 23 + 72247402 I e proCoq1.NW_012152729v1 2917646 23 + 9850184 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1281889.000000 s hg38.chr16_GL383557v1_alt 19063 101 + 89672 AACAGGATGCCAGAACACAAATCCAGGGATCAATGGACAAGAGAGGGAAGGAAAGAAACTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA s panTro5.chr16 21445105 101 - 81586097 AACAAGATGCCAGAACACAAATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAGACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21511908 101 - 90481686 AACAAGATGCCAGAACACAAATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744841 101 + 3010529 AACAAGATGCCAGAACACAAATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53856985 101 + 163208435 AACAAGATGCCAGAACACAAATCCAAGGATCAATGGATAAGAGAGGGAAGGAAAGAAGCTAAAAATCAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21330970 101 - 74971481 AACAAGATGCCAGAACACAGATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040274 101 - 78541002 AACAAGATGCCAGAACACAGATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761315 101 + 43916225 AACAAGATGCCAGAACACAGATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58197915 101 + 75399963 AACAAGATGCCAGAACACAGATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746887 101 - 7209941 AACAAGATGCCAGAACACAGATCCAAGGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488526 101 + 3907144 AACAAGATGCCAGAACACAGATCTAATGATCAATGGACAAGAGAGGGAAGGAAAGAAGCTAAAACTGAAGACCTTTATTCTTGCCTTACAAGGGGCCACAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501147 101 - 44557958 AACAAGATGCCAGAACACAAATCTAAGGATCAGTGGACACGAGTGGGAAGGAAAGAAGCTAAAACTAAAGACCTTTATTCTTGTCTTACAAAGGGCCACAA i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6302865 101 + 6628207 AACAAGATGCCAGAATACAAACCTAAGGATCAGTGGACATGAGTGGGAAGGAAAGAAGCTAAAACTAAAGACTTTTATTCTTGTCTTACAAGGGGCAACAA i saiBol1.JH378225 C 0 I 2 s cebCap1.NW_016107433v1 3288151 101 - 5917169 AATAAGATGTCAGAACACAAATCTAAGGATCAGTGGACACAAGTGGGAAGGAAAGAAGCTAAAACTAAAGACCTTTATTCTTGTCTTACAAGGGGCCACAA i cebCap1.NW_016107433v1 C 0 I 21 s aotNan1.NW_018500622v1 9251875 101 - 10531588 AACAAGATGCCAGAACACAAATCTAAGGATCAGTGGATACGAGTGGGAAGGAAAGAAGTTAAAACTAAAGACCTTTATTCTTGTCTTACAAGGGGCCACAA i aotNan1.NW_018500622v1 C 0 I 2 s micMur3.chr20 54906344 96 + 72247402 AACAAGATGCCAGAACACACACCCATGGATCAGTGGACAAAAG-----AGGAAAGAAGATAAAACCGGAGATCTTTATTCCTGATTTACAAGGGGCCACAA i micMur3.chr20 I 23 C 0 s proCoq1.NW_012152729v1 2917669 96 + 9850184 AACAAGATGCCAGAACACACACCCATGGATCAGTGGACAAAAG-----AGGAAAGAAGATAAAACCGGAGATCTTCATTCCTGATTTACAAGGGGCCACAA i proCoq1.NW_012152729v1 I 23 C 0 s mm10.chr8 22444896 90 - 129401213 CACAAGATGCCAGAGC-CATGTCCAAGGATCAGTGGGCATGACAGGGAAGGAAA---------ACAGGAGATCCTT-TGCTTGTATTAGAAGGGGCCAGAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80433485 101 + 88915250 AACCAGATGCCAAAACACACACCCAAGGATCAAATGGCAAGAGGGGAAAGGAAAGAAGATAAAATTGTAGGGCTTCCTCCCTGCCTTATGAGGAGTCATAA i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=147804.000000 s hg38.chr16_GL383557v1_alt 19164 12 + 89672 GAGGTATCTGTT s panTro5.chr16 21445206 12 - 81586097 GAGGTATCTGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512009 12 - 90481686 GAGGTATCTGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744942 12 + 3010529 GAGGTATCTGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857086 12 + 163208435 GAGGTATCTGTT i nomLeu3.chr2 C 0 I 309 s rheMac8.chr20 21331071 12 - 74971481 GAGGTATCTGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040375 12 - 78541002 GAGGTATCTGTT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761416 12 + 43916225 GAGGTATCTGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198016 12 + 75399963 GAGGTATCTGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6746988 12 - 7209941 GAGGTATCTGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488627 12 + 3907144 GAGGTATCTGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501250 12 - 44557958 GAGGTATTTGTT i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6302968 12 + 6628207 GAGATATTTGTT i saiBol1.JH378225 I 2 C 0 s aotNan1.NW_018500622v1 9251978 12 - 10531588 GAGGTATTTGTT i aotNan1.NW_018500622v1 I 2 I 1 s micMur3.chr20 54906440 12 + 72247402 GAGGTATCTGTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2917765 12 + 9850184 GATGTATCTGTT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22444986 12 - 129401213 GACATATCTGTC i mm10.chr8 C 0 C 0 s canFam3.chr5 80433586 12 + 88915250 GAAGTATTTGTG i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=53307.000000 s hg38.chr16_GL383557v1_alt 19176 6 + 89672 AAATAT s panTro5.chr16 21445218 6 - 81586097 AAATAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512021 6 - 90481686 AAATAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744954 6 + 3010529 AAATAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857407 6 + 163208435 aaaTAT i nomLeu3.chr2 I 309 C 0 s rheMac8.chr20 21331083 6 - 74971481 AAATAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040387 6 - 78541002 AAATAT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761428 6 + 43916225 AAATAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198028 6 + 75399963 AAATAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747000 6 - 7209941 AAATAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488639 6 + 3907144 AAATGT i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9251991 6 - 10531588 AAATAT i aotNan1.NW_018500622v1 I 1 C 0 s micMur3.chr20 54906452 6 + 72247402 ACATAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2917777 6 + 9850184 ACATAT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22444998 6 - 129401213 AAATAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80433598 6 + 88915250 AAATGT i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302980 0 + 6628207 C e calJac3.chr20 21501262 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=48659.000000 s hg38.chr16_GL383557v1_alt 19182 6 + 89672 GAATTC s panTro5.chr16 21445224 6 - 81586097 GAATTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512027 6 - 90481686 GAATTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744960 6 + 3010529 GAATTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857413 6 + 163208435 GCATTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331089 6 - 74971481 GAATTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040393 6 - 78541002 GAATTC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761434 6 + 43916225 GAATTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198034 6 + 75399963 GAATTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747006 6 - 7209941 GAATTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488645 6 + 3907144 GAATTC i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9251997 6 - 10531588 GAATTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906458 6 + 72247402 GAATTC i micMur3.chr20 C 0 I 13 s mm10.chr8 22445004 6 - 129401213 GAATTC i mm10.chr8 C 0 C 0 e canFam3.chr5 80433604 0 + 88915250 C e proCoq1.NW_012152729v1 2917783 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302980 0 + 6628207 C e calJac3.chr20 21501262 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=7098.000000 s hg38.chr16_GL383557v1_alt 19188 1 + 89672 T s panTro5.chr16 21445230 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512033 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744966 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857419 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331095 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040399 1 - 78541002 T i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761440 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198040 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747012 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488651 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9252003 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 I 12 s mm10.chr8 22445010 1 - 129401213 T i mm10.chr8 C 0 C 0 e canFam3.chr5 80433604 0 + 88915250 C e micMur3.chr20 54906464 13 + 72247402 I e proCoq1.NW_012152729v1 2917783 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302980 0 + 6628207 C e calJac3.chr20 21501262 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=95359.000000 s hg38.chr16_GL383557v1_alt 19189 19 + 89672 -------GTTGggctgggcaaggtgg s panTro5.chr16 21445231 19 - 81586097 -------GTTGggctgggcaaggtgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512034 19 - 90481686 -------GTTGggctgggcaaggtgg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744967 19 + 3010529 -------GTTGggctgggcaaggtgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857420 19 + 163208435 -------GTTGggttgggcaaggtgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331096 19 - 74971481 -------GCTGggctgggcaaggtag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040400 19 - 78541002 -------GCTGggctgggcaaggtag i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761441 19 + 43916225 -------GTTGggctgggcaaggtag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198041 19 + 75399963 -------GTTGggctgggcaaggtag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747013 19 - 7209941 -------GTTGggctgggcaaggtag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488652 19 + 3907144 -------GTTGggctgggcaaggtgg i colAng1.NW_012123265v1 C 0 C 0 s mm10.chr8 22445011 25 - 129401213 AGTAAATGCT-CTCTGGACAGGGCGG i mm10.chr8 C 0 C 0 e canFam3.chr5 80433604 0 + 88915250 C e micMur3.chr20 54906464 13 + 72247402 I e proCoq1.NW_012152729v1 2917783 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9252004 12 - 10531588 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302980 0 + 6628207 C e calJac3.chr20 21501262 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=1201264.000000 s hg38.chr16_GL383557v1_alt 19208 317 + 89672 ctcacacctgtaatcccagcattttgggaggctgaggtgggcgaatcacaaggtcaagagtttgagaccagcctggccaacgtggtgaaaccccgtctctactgcacaatgtgcacatgtaccctaaaacttagagtataattaaaaaaaaaaaaaaaaaaaaaaatttgccaagcgtggtggcgcgtgcctgtagtcctagctacttggaaggctgaggcaggagaattgcttgaacccaggaggtggtggttgcagtaagctgagatcgcaccactgcactccagcctgggtgacagagcaagtctc-------aaaaaaa------a s panTro5.chr16 21445250 267 - 81586097 ctcacacctgtaatcccagcattttgggtggctgaggtgggcgaatcacaaggtcaagagtttgagaccagcctggccaatgtggtgaaaccccgtctctact--------------------------------------------------aaaaatacaaaaatttgccaagcgtggtgacgcgtgcctgtagtcctagctacttggaaggctgaggcaggagaattgcttgaacccaggaggtggtggttgcagtaagctgagatcgcgccactgcactccagcctgggtgacagagcaagtctc-------aaaaaaa------a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512053 267 - 90481686 ctcacacctgtaatcccagcattttgggtggctgaggtgggcgaatcacaaggtcaagagtttgagaccagcctggccaatgtggtgaaaccccgtctctact--------------------------------------------------aaaaatacaaaaatttgccaagcgtggtgacgcgtgcctgtagtcctagctacttggaaggctgaggcaggagaattgcttgaacccaggaggtggtggttgcagtaagctgagatcgcgccactgcactccagcctgggtgacagagcaagtctc-------aaaaaaa------a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 744986 267 + 3010529 ctcacacctgtaatcccagcattttgggaggctgaggtgggcgaatcacaaggtcaagagtttgagaccagcctggccaacgtggcgaaaccccgtctctact--------------------------------------------------aaaaatacaaaaatttgccaagcgtggtggcgcgtgcctgtagtcctagctacttggaaggctgaggcaggagaattgcttgaacccaggaggtggtggttgcagtaagctgagatcgcgccactgcactccagcctgggtgacagagcaagtctc-------aaaaaaa------a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857439 273 + 163208435 ctcacacctgtaatcccagcattttgggaggctgaggtgggcgaatcacaaggtcaagagtttgagaccatcctggccaacgtggtgaaaccccatctctact--------------------------------------------------aaaaatacaaaaatttgctgagcatggtggcgcgtgcctgtagtcccagctacttggaagactgaggcaggagaattgcttgaacccaggaggcggtggttgcagtaagccgagatcgcgccactgcactccagcctgggtgacaaagcaagtctc-------aaaaaaacaaacca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331115 264 - 74971481 ttcacacctgtaatcccagcattttgggaggctgaggcgggcgaatcacaaggtcaagagtttgagactagcctggccaacgtggtgaaaccctatctctact--------------------------------------------------aaaaatacaaaaatttgccaggcgtagtggtgcgtgcc---------agctacttggaaggctgaggca-gagaattgcttgaacccaggaggcggtggttgcagtaagctgagatcacgccacggcactccagcctgggtgacagagcaagtctcaaaaaaaaaaaaaa------a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040419 262 - 78541002 ctcacacctgtaatcccagcattttgggaggctgaggcgggcgaatcacaaggtcaagagtttgagactagcctggccaacgtggtgaaaccctatctctact--------------------------------------------------aaaaatacaaaaatttgccaggcgtagtggtgcgtgcc---------agctacttggaaggctgaggcaggagaattgcttgaacccaggaggcggtggttgcagtaagctgagatcacgccacggcactccagcctgggtgacagagcaagtctc---aaaaaaaaaaa------a i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761460 254 + 43916225 ctcacacctgtaatcccagcattttgggaggctgaggcgggcgaatcacaaggtcaagagtttgagactagcctggccaacgtggtgaaaccctatctctact--------------------------------------------------aaaaatacaaaaatttgccaggcgtagtggtgcgtgcc---------agctacttggaaggctgaggcaggagaattgcttgaacccaggaggcagtggttgcagtgagctgagatcgcgccacggcactccagcctgggtgacagagcaagtctc-----------aaa------a i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198060 261 + 75399963 ctcacacctgtaatcccagcattttgggaggctgaggcaggcgaatcacaaggtcaagagtttgagattagcctggccaacgtggtgaaaccctatctctact--------------------------------------------------aaaaatacaaaaatttgccaggcgtagtgttgcgtgcc---------agctacttggaagtctgaggcaggagaattgcttgaacccaggaggcggtggttacagtaagctgagatcgcgccacggcactccagcctgggtgacagagcaagtctc----aaaaaaaaaa------a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747032 265 - 7209941 ctcacacctgtaatcccagcattttgggaggctgaggcgggcgaatcacaaggtcaagagtttgagactagcctggccaacgtggtgaaaccctatctctact--------------------------------------------------caaaatacaaaaatttgccaggcgtagtggtgcgtgcc---------agctacttggaaggctgaggcaggagaattgcttgaacccaggaggcggtggttgcagtgagctgagatcgcgccacggcactccagcctgggtgacagagcaagtctcaaaaaaaaaaaaaa------a i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488671 256 + 3907144 ttcacacctgtaatcccagcattttgggaggctgaggtgggcgaatcacaaggtcaagagtttgagactagcctggccaatgtggtgaaaccctatctctact--------------------------------------------------aaaaatacaaaaagttgccaggtgtggtggtgcgtgcc---------agctacttggaaggctgatgcaggagaactgcttgaacccaggaggcggtggttgcagtaagctgagatcgcgccacagcactccagcctgggtgacagagcaagtctc---------aaaaa------a i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80433604 0 + 88915250 C e micMur3.chr20 54906464 13 + 72247402 I e mm10.chr8 22445036 0 - 129401213 C e proCoq1.NW_012152729v1 2917783 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9252004 12 - 10531588 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e saiBol1.JH378225 6302980 0 + 6628207 C e calJac3.chr20 21501262 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=32856.000000 s hg38.chr16_GL383557v1_alt 19525 7 + 89672 aaaaaaa- s panTro5.chr16 21445517 7 - 81586097 aaaaaaa- i panTro5.chr16 C 0 I 1 s panPan2.chr16 21512320 7 - 90481686 aaaaaaa- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745253 7 + 3010529 aaaaaaa- i gorGor5.CYUI01000018v1 C 0 I 2 s nomLeu3.chr2 53857712 7 + 163208435 aaaaaaa- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331379 7 - 74971481 aaaaaaa- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040681 7 - 78541002 aaaaaaa- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761714 7 + 43916225 aaaaaaa- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198321 7 + 75399963 aaaaaaa- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747297 7 - 7209941 aaaaaaa- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488927 7 + 3907144 aaaaaaa- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501262 7 - 44557958 -AAAATAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302980 7 + 6628207 -AAAATAT i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80433604 0 + 88915250 C e micMur3.chr20 54906464 13 + 72247402 I e mm10.chr8 22445036 0 - 129401213 C e proCoq1.NW_012152729v1 2917783 0 + 9850184 C e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9252004 12 - 10531588 I e cebCap1.NW_016107433v1 3288252 21 - 5917169 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=118816.000000 s hg38.chr16_GL383557v1_alt 19532 19 + 89672 gaaTTCTGTTAACA----------AAGTA s panTro5.chr16 21445525 19 - 81586097 gaaTTCTGTTAACA----------AAGTA i panTro5.chr16 I 1 C 0 s panPan2.chr16 21512327 19 - 90481686 gaaTTCTGTTAACA----------AAGTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745262 19 + 3010529 gaaTTCTGTGAACA----------AAGTA i gorGor5.CYUI01000018v1 I 2 C 0 s nomLeu3.chr2 53857719 19 + 163208435 gaaTTCTGTTAACA----------AAGTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331386 29 - 74971481 gaaTTCTGTTAACATCTGTTAACAAAGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040688 29 - 78541002 gaaTTCTGTTAACATCTGTTAACAAAGTC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761721 29 + 43916225 gaaTTCTGTTAACATCTGTTAACAAAGTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198328 29 + 75399963 gaaTTCTGTTAACATCTGTTAACAAAGTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747304 29 - 7209941 gaaTTCTGTTAACATCTGTTAACAAAGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488934 20 + 3907144 gaaTTCTGTTAATATCT---------GTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501269 19 - 44557958 GAATTCTACCAACA----------AACCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6302987 19 + 6628207 GAATTCTATCAAAA----------AACTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288273 19 - 5917169 GAATTCTATCAACA----------AACTC i cebCap1.NW_016107433v1 I 21 C 0 s proCoq1.NW_012152729v1 2917783 19 + 9850184 GAATTCTGTTAACA----------ACCTC i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80433604 19 + 88915250 GAATTCCAGTAACA----------ACCTC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54906464 13 + 72247402 I e mm10.chr8 22445036 0 - 129401213 C e dasNov3.JH569970 898719 844 + 1009443 I e aotNan1.NW_018500622v1 9252004 12 - 10531588 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=295051.000000 s hg38.chr16_GL383557v1_alt 19551 24 + 89672 TTTCCCAGGATGAAATTGAGGGCA s panTro5.chr16 21445544 24 - 81586097 TTTCCCAGGATGAAATTGAGGGCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512346 24 - 90481686 TTTCCCAGGATGAAATTGAGGGCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745281 23 + 3010529 -TTCCCAGGATGAAATTGAGGGCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857738 24 + 163208435 TTTCCCAGGATGAAATTGAGACTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331415 24 - 74971481 TTTCCCAGAATGAAATTGAGGGCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040717 24 - 78541002 TTTCCCAGAATGAAATTGAGGGCA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761750 24 + 43916225 TTTCCCAGAATGAAATTGAGGGCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198357 24 + 75399963 TTTCCCAGAATGAAATTGAGGGCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747333 24 - 7209941 TTTCCCAGAATGAAATTGAGGGCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488954 24 + 3907144 TTTCCCAGAATGAAACTGAGGGCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501288 24 - 44557958 TTTCCCAGGATGGAATTGAGGGCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303006 24 + 6628207 TTTCCCAGGATGGAATTGAGGGCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288292 24 - 5917169 TTTCCCAGGATGGAATTGAGGACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252016 24 - 10531588 TTTCTCAGGATGGAATTGAGGGCA i aotNan1.NW_018500622v1 I 12 C 0 s micMur3.chr20 54906477 24 + 72247402 TTTCCCAGGATGGAATTGAGGGCA i micMur3.chr20 I 13 C 0 s proCoq1.NW_012152729v1 2917802 24 + 9850184 TTTCCCAGGATGGAATTGAGGACA i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80433623 24 + 88915250 AACCCTGGGATGGAATTGAGGGCC i canFam3.chr5 C 0 C 0 e mm10.chr8 22445036 0 - 129401213 C e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=859205.000000 s hg38.chr16_GL383557v1_alt 19575 74 + 89672 ACTGTACACAAAGTACACAA-----CATTTCCTCCCTTAAAGTCTAGGGAAGTAAATTGGGTCATGTGTATGAGGACTC s panTro5.chr16 21445568 74 - 81586097 ACTGTACACAAAGTACACAA-----CATTTCCTCCCTTAAAGTCTAGGGAAGTAAATTGGGTCATGTGTATGAGGACTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512370 74 - 90481686 ACTGTACACAAAGTACACAA-----CATTTCCTCCCTTAAAGTCTAGGGAAGTAAATTGGGTCATGTGTATGAGGACTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745304 74 + 3010529 ACTGTACACAAAGTACACAA-----CATTTCCTCCCTTAAAGTCTAGGGAAGTAAATTGGGTCATGTGTATGAGGACTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857762 74 + 163208435 ACTGTACAGAAAGTACACAA-----CATTTCCTCCCTTAAAGTCTAGGGAAGTAAATTGGGTCATGTGTATGAGGACTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331439 74 - 74971481 ACTGTACAGAGAGTACACAA-----CCTTTCCTCCCTTAAAGTCTAGGGAATTAAATTGGGTCGTGTGTATGAGGACTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040741 74 - 78541002 ACTGTACAGAGAGTACACAA-----CCTTTCCTCCCTTAAAGTCTAGGGAATTAAATTGGGTCGTGTGTATGAGGACTC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761774 74 + 43916225 ACTGTACAGAGAGTACACAA-----CCTTTCCTCCCTTAAAGTCTAGGGAATTAAATTGGGTCGTGTGTATGAGGACTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198381 74 + 75399963 ACTGTACAGAGAGTACACAA-----CCTTTCCTCCCTTAAAGTCTAGGGAATTAAATTGGGTCGTGTGTATGAGGACTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747357 74 - 7209941 ACTGTACAGAGAGTACACAA-----CCTTTCCTCCCTTAAAGTCTAGGGAATTAAATTGGGTCGTGTGTATGAGGACTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 488978 74 + 3907144 ACTGTACAGAGAGTACACAA-----CCTTTCCTCCCTTAAAGTCTAGGGAATTAAATTGGGTCATGTGTATGAGGACTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501312 74 - 44557958 ACTGTACAGAAAGTACACAG-----TATTTCCTCCCTTAAAGTCTAGGGAAATAAAATGGTTCATGTATATGAGGACTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303030 72 + 6628207 ACTGTACAGAAAGTACACA-------ATTTCCTCCCTTAAAGTCTACAGAAATAAAATGGTTCATGTGTATGAGGACTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288316 74 - 5917169 ACTGCACAGAAAGAACACAA-----TATTTCCTCCCTTAAAGTCTAGGGAAATAAAATGGTTCACGTGTATGAGGACTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252040 74 - 10531588 ACTGTACAGAAAGTACACAG-----TATTTCCTCCCTTAAAGTCTAGGGAAATAAAATGGTTCATGTGTATGAGGACTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906501 74 + 72247402 ATTGCAGAGTAAGTACTTAA-----TATTTCCTCCCTTAAACTCTAGGGAAGTAAACTGGGTCATACATATGAGGACTC i micMur3.chr20 C 0 I 60 s proCoq1.NW_012152729v1 2917826 74 + 9850184 ATTGTAGAGAAAGTACTTAA-----TATTTCCTCCCTTGAACTCTAGGGAAGTAAACTGGGTCATACATATGAGGACTC i proCoq1.NW_012152729v1 C 0 I 1 s mm10.chr8 22445036 71 - 129401213 ACTGTGTAGAAAGTGCCAGA-----TATTTC--CCCTTAAACTCTAGGGAAGT-AACTGAGCAGTGCATAGGAAGACTC i mm10.chr8 C 0 C 0 s canFam3.chr5 80433647 70 + 88915250 TTTACAGAGAAATTACTTAATTATTTCTTTCTTCCCTTGA---------GAGTAAATAGGGTCATGCATATGCAGATTC i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=13723.000000 s hg38.chr16_GL383557v1_alt 19649 3 + 89672 -TTG s panTro5.chr16 21445642 3 - 81586097 -TTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512444 3 - 90481686 -TTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745378 3 + 3010529 -TTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857836 3 + 163208435 -CCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331513 3 - 74971481 -CTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040815 3 - 78541002 -CTG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761848 3 + 43916225 -CTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198455 3 + 75399963 -CTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747431 3 - 7209941 -CTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489052 3 + 3907144 -CTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501386 3 - 44557958 -TCG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303102 3 + 6628207 -CCG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288390 3 - 5917169 -CCG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252114 3 - 10531588 -CTG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2917901 3 + 9850184 -TCT i proCoq1.NW_012152729v1 I 1 C 0 s mm10.chr8 22445107 3 - 129401213 -CCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80433717 4 + 88915250 TCCT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54906575 60 + 72247402 I e dasNov3.JH569970 898719 844 + 1009443 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=654320.000000 s hg38.chr16_GL383557v1_alt 19652 67 + 89672 TTTGCTA-AGGAGTTCTACTCTGCATACACAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA s panTro5.chr16 21445645 67 - 81586097 TTTGCTA-AGGAGTTCTACTCTGCATACACAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512447 67 - 90481686 TTTGCTA-AGGAGTTCTACTCTGCATACACAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745381 67 + 3010529 TTTGCTA-AGGAGTTCTACTCTGCATACACAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857839 67 + 163208435 TTTGCTA-AGGAGTTCTACTCTGCATACACAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331516 67 - 74971481 TTTGCTA-AGGAGTTCTACTCTGTATACATAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040818 67 - 78541002 TTTGCTA-AGGAGTTCTACTCTGTATACATAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761851 67 + 43916225 TTTGCTA-AGGAGTTCTACTCTGTATACATAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198458 67 + 75399963 TTTGCTA-AGGAGTTCTACTCTGTATACACAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747434 66 - 7209941 TTTGCTA-AGGAGTTCTACTCTGTATACATAGCCAACTTA-AAATATAACATTAGGG-----------AACAAAGATCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489055 67 + 3907144 TTTGCTA-AGGAGTTCTACTCTGTATACATAGCCAACTTA-AAATATAACATTAGGG----------AAACAAAGATCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501389 77 - 44557958 TTTACTA-TGGAGTTCCACTCTATATACATAGCCAATTTG-AAATATAATTTTAGGGAAACAGAAACAAACAAAGATCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303105 73 + 6628207 TTTACTA-AGGCATTCCACTCTATATACATAGCCAATTTG-AAATATAATGTTAGGGAAACAG----AAACAAAGATCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288393 73 - 5917169 TTTACTA-AGGAGTTCCACTCTATATACATAGCCAATTTG-AAATATAATGTTAGGGAAACAG----AAACAAAGATCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252117 77 - 10531588 TTTACTA-AGGAGTTCCACTCTATATACATAGCCAATTTG-AAATACAATGTTAGGGAAACAGAAACAAACAAAGATCA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2917904 55 + 9850184 TTTGCTA-AGGGGTTCTACTCTGTATAC-----------------ATAACTTCAGGGAAAC------CAACCAAGGTAA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445110 67 - 129401213 TTTACTG-AAG---TCTACAATGTATTCCTAGCCAACTTA-AAATTAAATTTCAGGAAAC-------AAAGTAAGATCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80433721 65 + 88915250 TTTGC-----AGGTTCCTCTC----TACATCGCCAATTTA-AAGCATAACTCTAGGGAAACAA----AAAACAAGATCA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899563 66 + 1009443 TTTGCTATGGGGGCTCTAC------TACCCCTTAAAGTCATAAATATAACTTTCAGAAAC-------ACACCAAGGCCA i dasNov3.JH569970 I 844 C 0 e micMur3.chr20 54906575 60 + 72247402 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=111358.000000 s hg38.chr16_GL383557v1_alt 19719 7 + 89672 TCAGTAT s panTro5.chr16 21445712 7 - 81586097 TCAGTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512514 7 - 90481686 TCAGTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745448 7 + 3010529 TCAGTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857906 7 + 163208435 TCAGTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331583 7 - 74971481 TCAGTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040885 7 - 78541002 TCAGTAT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761918 7 + 43916225 TCAGTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198525 7 + 75399963 TCAGTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747500 7 - 7209941 TCAGTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489122 7 + 3907144 TCAGTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501466 7 - 44557958 TCAGTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303178 7 + 6628207 TCAGTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288466 7 - 5917169 TTAGTAT i cebCap1.NW_016107433v1 C 0 I 327 s aotNan1.NW_018500622v1 9252194 7 - 10531588 TCAGTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906635 7 + 72247402 TCAGTAT i micMur3.chr20 I 60 C 0 s proCoq1.NW_012152729v1 2917959 7 + 9850184 TCAGTAT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445177 7 - 129401213 TTATTGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80433786 7 + 88915250 TCAGTAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899629 7 + 1009443 TTAGTAT i dasNov3.JH569970 C 0 C 0 e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=3434407.000000 s hg38.chr16_GL383557v1_alt 19726 279 + 89672 AAAAATACTATGGTCATA--------------TGCAATGCACAC---AGCAG-TAACATTACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGCAAACTG--GAGTGGAAAAATACTCATGTAGGCCACA----GACTATGCAATTGGGATAGATGGTACTGAAGGGGCAAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC s panTro5.chr16 21445719 279 - 81586097 AAAAATACTATGGTCATA--------------TGTAATGCACAC---AGCAG-TAACATTACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTG--GAGTGGAAAAATACTCATGTAGGCCACA----GACTATGCAATTGGGATAGACGGTACTGAAGGGGCAAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512521 279 - 90481686 AAAAATACTATGGTCATA--------------TGTAATGCACAC---AGCAG-TAACATTACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTG--GAGTGGGAAAATACTCATGTAGGCCACA----GACTATGCAATTGGGATAGACGGTACTGAAGGGGCAAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745455 277 + 3010529 AAAAATACTATGGTCATA--------------TGTAATGCACAC---AGCAG-TAACATTACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCGTTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGCAAACTG--GAGTGGAAAAATACTCGTGTAGGC--CA----GACTATGCAATTGGGATAGATGGTACTGAAGGGGCAAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGTTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53857913 272 + 163208435 AAAAATACTATGGTCATA--------------TGTAATGCACAC---AGCAG-TAACATCAC-----------------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGAAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTATGCAATTGGGATAGACGGTACTGAAGGGGCAAATGCTGCAGATTTCAATACACCGGCAGATCAACTGAAAATATCTTGCTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331590 279 - 74971481 AAAAATACTATGGTCGTA--------------TGTAATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGGAGAGTGGAAAAATACTCTTGTAGGCCACA----GACTATGCAATTGGGGTGGAT--TACTGAAGGGGCCAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21040892 279 - 78541002 AAAAATACTATGGTCGTA--------------TGTAATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGGAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTATGCAATTGGGGTGGAT--TACTGAAGGGGCCAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20761925 279 + 43916225 AAAAATACTATGGTCGTA--------------TGTAATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGGAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTATGCAATTGGGATGGAT--TACTGAAGGGGCCAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198532 278 + 75399963 AAAAATACTATGGTCGTA--------------TGTAATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTT-CATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGCAAACTGGAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTATGCAATTGGTATGGAT--TACTGAAGGGGCCAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747507 279 - 7209941 AAAAATACTATGGTCGTA--------------TGTAATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGTGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGGAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTATGCAATTGGGATGGAT--TACTGAAGGGGCCAATGCTGCAGATTTCCATACACTGGCAGATCAACTGAAAATATCTTGCTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489129 279 + 3907144 AAAAATACTATGGTCGTA--------------TGTAATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-AATAAATAGTTTTCATTTTCACTTCCATGAGTG---CATTCA------CCAGCGGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGGAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTATGCAATTGGGATGGAT--TACTGAAGGGGCCAATGCTGCAGATTTCCATACACTGGCAGATCAGCTGAAAATATCTTGCTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501473 274 - 44557958 AAAAATACTATGGTCATA--------------CATGATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-----AATAGTCTTCATTTTCACTTCCATGAGGG---CACTTA------CCAGCAGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-CATGGTAAACTGCAGAGTGGAAAAATACTAGTGTGGGCCACA----GACTGTGCAATAGGGATGGAT--TACTGAA-GGGCCAATGGGGTATATTTCCATACACTGGCAGATCAACTTAAAATATCTTGCTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303185 269 + 6628207 AAAAATACTATGGTCATA--------------CATGATGCACAC---AGCAG-TAACATC------ACTCT--------TG-----AATAGTCTTCATTTTCACTTCCACGAGGG---CATTTA------CCAGCAGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-CATGGTAAACTGCAGAGTGGAAAAATACTCGTGTAGGCCACA----AACTGTGCAATAGGGATGGAT--TACTGAAGGGGCCAATGGGGTCTATTTCCATACACTGGCAGATCAACTTAAAATATCTTGCTTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3288800 253 - 5917169 aaaaaTACTATGGTCATA--------------CATGATGCACAC---AGCAG-TACCATCACTGAAACTCT--------TG-----AATAGTCTTCATTTTCACTTCCACGAGGG---CATTTA------CCAGCAGTTAA----------------------AAAAGCAATTTGATGCCAAGCAAGA-CATGGTAAACTGGAGAGTGGAAAAATACTCGTGTAGGCCACA----GACAGTGCAATAGGGATGGAT--TACTGAAGGGGTGAATGGGGTATATTTCCATACACTGGCAGATCAACTTAAAATATCTTGCTTC i cebCap1.NW_016107433v1 I 327 C 0 s aotNan1.NW_018500622v1 9252201 275 - 10531588 AAAAATACTATGGTCATA--------------CACGATGCACAC---AGCAG-TAACATCACTGAAACTCT--------TG-----AATAGTCTTCATTTTCACTTCCACAAGGG---CATTTA------CCAGCAGTTAAACTAGCAATTTCATTTAAGTAGAAAAGTAATTTGATGCCAAGAAAGA-CATGGTAAACTGTAGAGTGGAAAAATACTCGTGTAGGCCACA----GACTGTGGAATAGGGATGGAT--TACTGAAGGGGCCAATGGGGTATATTTCCATACACTGGCAGATCAACTTAAAATATCTTGCTTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906642 274 + 72247402 AAAAATACTATGACCATA--------------AGTGAAGGACAA---AGCAG-CAATATCACTGAATCTCT--------TG-AATAAATAATTTCCATTTTCACTTTCACGAGTG---CATTCA----GTCCAACAATCAAACTAGCAATTTGAATGAGGTAGAAAGGTAATTTGATGCCGAGAACGA-TGTGCTAAACTAGAGAGTGGAAAAATACTTGCTTAGGCCACA----GACTATTCAATTGGGATGGAT--TATTGATG-------TAATGTAAATGTCCTTATGTTGGCAGATCATCTGAAAATACCTTGCTTC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2917966 280 + 9850184 -AAAATACTATGACCGTA--------------AGTGAAGGACAC---AGCAT-TAATATCACTGAATCTCT--------TG-AATAAATAATTCCCATTTTCGCTTTCACAAGTG---CATTCA----GTCCAACAATCAAACTAGCAATTTGAATTAGGTAGAAAGGTAATTTGATGCCAAGCACAA-TGTGCTAAACTGGAGAGTGGAAAAATACTTCCTTAGGCCACA----GACTATTCAATTGGGATGGAT--TATTGAAGGGGCCCATGTTGTAAATTTCCTTATGTTGGCAGATCATCTGAAAATACCTCGCTTC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445184 305 - 129401213 -AGAATAATAAGACCTGAGTGGGAGGTACCAGTGTAAGACTAGCCTGGGCTA-CAGGATCCATGAGACCTTGTTACAGAAG-GACAAAAAGTAAGAAGGTAATCTCCTGTGAAAGACACAATCACCACCTCCACTGGATTTAGTGGGAATTTAAATTATGTAGAAAGATAG-AAAATGCCAAGAAATAGTGTGGGCAACTGGAGAGTGG-AAAATACC----TAGGCCACA----GAGCACCTAATTGAGATAGAT--TTCTAGAGGGGCTGATGTTGCAAA-ACCCACATGTTAGTGGGTCATCTGAAAA-ACCTTCTTTC i mm10.chr8 C 0 I 198 s canFam3.chr5 80433793 272 + 88915250 ATAAATACTATGACCATA--------------TGTGAACGACAC---AGCAG-TAACATCAC-----------------TG-----AATAATTTCCATTACTACTTCCATAACTG---AATTCA----GCCCAACAGTTAAGCTAACGATTTGAATTAAGCAGAAAGGTAACTTGATGCCAAGAAAGA-TGTGGTGAACTGGAGAGTGGAAAAATACTTGCTTAAGCCACAGACTGACTATTCAACTGAGATGGAT--TATTGAAGGGGCCTATGCTGTAGATTTCCTTATGCTGGTACATCAGCTGAAAATATCTGGCTTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899636 283 + 1009443 CTAAATATTATAACCATA--------------TGTGTATGATGC---AGCAGTTAACATCATTAAATTTCC--------TGGAATAAATAATTTCCATTTCCACTCCCATAACTG---AATTTA----GCCCAATAGTTGAACTAACGATTTGAATTCAGTAGAAAGGTAATTTGATGCCAAGAAAGA-TGTGGTAAACTGGAGAGTGGAAAAATACTTGCTTAGGCCACA----GACTATTCAGTTGGGATGGAC--TGTTGAAGGGGCTGATGTTGCAAATTTCCATATGTTGGCAGATTACCTGAAAATATCTTGCTTC i dasNov3.JH569970 C 0 C 0 e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=51260.000000 s hg38.chr16_GL383557v1_alt 20005 5 + 89672 CATTT s panTro5.chr16 21445998 5 - 81586097 CATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512800 5 - 90481686 CATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745732 5 + 3010529 CATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858185 5 + 163208435 CATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21331869 5 - 74971481 CATTT i rheMac8.chr20 C 0 I 330 s macFas5.chr20 21041171 5 - 78541002 CATTT i macFas5.chr20 C 0 I 330 s cerAty1.NW_011999143v1 20762204 5 + 43916225 CATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198810 5 + 75399963 CATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747786 5 - 7209941 CATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489408 5 + 3907144 CATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501747 5 - 44557958 AATTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303454 5 + 6628207 AATTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289053 5 - 5917169 AATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252476 5 - 10531588 AATTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906916 5 + 72247402 GGTTC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918246 5 + 9850184 AGTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80434065 5 + 88915250 AGTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899919 5 + 1009443 AATTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22445489 198 - 129401213 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=87406.000000 s hg38.chr16_GL383557v1_alt 20010 7 + 89672 AAAACTC s panTro5.chr16 21446003 7 - 81586097 AAAACTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512805 7 - 90481686 AAAACTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745737 7 + 3010529 AAAACTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858190 7 + 163208435 AAAACTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332204 7 - 74971481 AAAACTG i rheMac8.chr20 I 330 C 0 s macFas5.chr20 21041506 7 - 78541002 AAAACTG i macFas5.chr20 I 330 C 0 s cerAty1.NW_011999143v1 20762209 7 + 43916225 AAAACTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198815 7 + 75399963 AAAACTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747791 7 - 7209941 AAAACTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489413 7 + 3907144 AAAACTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501752 7 - 44557958 AAGACTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303459 7 + 6628207 AAGACTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289058 7 - 5917169 AAGACTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252481 7 - 10531588 AAGACTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906921 7 + 72247402 AAGACTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918251 7 + 9850184 AAGACTG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80434070 7 + 88915250 AAGGCGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899924 7 + 1009443 AAGACTA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22445489 198 - 129401213 I e macNem1.NW_012011355v1 14432975 5736 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=32262.000000 s hg38.chr16_GL383557v1_alt 20017 2 + 89672 AA s panTro5.chr16 21446010 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512812 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745744 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858197 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332211 2 - 74971481 AA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041513 2 - 78541002 AA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14438711 2 + 26466322 AA i macNem1.NW_012011355v1 I 5736 C 0 s cerAty1.NW_011999143v1 20762216 2 + 43916225 AA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198822 2 + 75399963 AA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747798 2 - 7209941 AA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489420 2 + 3907144 AA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501759 2 - 44557958 AA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303466 2 + 6628207 AA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289065 2 - 5917169 AA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252488 2 - 10531588 AA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54906928 2 + 72247402 AA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918258 2 + 9850184 AA i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80434077 2 + 88915250 GA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899931 2 + 1009443 AA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22445489 198 - 129401213 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=3952065.000000 s hg38.chr16_GL383557v1_alt 20019 257 + 89672 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAACTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGA-TCTTTTCTTTCCACAAAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGGGAAAGGCCTGAGGTACTGTATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA s panTro5.chr16 21446012 257 - 81586097 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAACTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGA-TCTTTTCTTTCCACAAAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGGGAAAGGCCTGAGGTACTATATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21512814 257 - 90481686 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAACTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGA-TCTTTTCTTTCCACAAAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGGGAAAGGCCTGAGGTACTATATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 745746 257 + 3010529 TGTTCTT-AGTATGTTTTAGTTTTCCCAGGGCTTAAACTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGA-TCTTTTCTTTCCACAAAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGGGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858199 257 + 163208435 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGA-TCTTTTCTTTCCACAGAGCAAAATTAATGAATCATCTGTCTTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGGGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332213 257 - 74971481 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCACAGTCAATTGATTTAGGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATGTGTGATTCTGAAAGAATTTAAAATTTATGTTGAGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041515 257 - 78541002 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCACAGTCAATTGATTTAGGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAACTAATGAATCATCTGTCCTTGTGAAAAATGTGTGATTCTGAAAGAATTTAAAATTTATGTTGAGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14438713 257 + 26466322 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCACAGTCAATTGATTTAGGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAACTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTTATGTTGAGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762218 257 + 43916225 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAACTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGAGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58198824 257 + 75399963 TGTTCTT-AATATGTTTTAGTTTTCCCAGAACTTAAATTCCACAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAACTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGAGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6747800 257 - 7209941 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCACAGTCAATTCATTTAAGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAACTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGAGAAAGGCCTGAGGTACTACATTTAAAAGGGATTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489422 249 + 3907144 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCCATAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGG-TCTTTTCTTTCCACAGAGCAAAACTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTGAGAAAGGC--------CTACATTTAAAAGGGTTTGTGGCAAAGCCTGACTTCTTAATAACTACTGTCTCAACATGCTTTTCT-TTTGAGGAGCAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21501761 258 - 44557958 TGTTCTT-AATATGTTTTAGTTTTCCCAGAGCTTAAATTCTAAAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGGTTTTTTTCTTTCCACAGAGCAAAATTAATGAATCACCTGTCCTTGTGAAAAATTAGTGATTCTGAAAGAATTTAAAATTCATGTTAGGAAAGGTCTGAGGTGCTACATTTAAAAGGGATTGTGGCAGAGTCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303468 257 + 6628207 TGTTCTT-AGTATGTTTTAGTTTTCCCAGAGCTTAAATTCTAAAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGG-TTTTTTCTTTTCACAGAGCAAAATTAATGAATAATCTGTCCTTGTGAAAAATTTGTGATTCTGAGAGAATTTAAAATTCATGTTAGGAAAGGCCAGAGGTGCTACATTTAAAAGGGATTGTGGCAAAGTATGACTTCTTAATAACTACTGTCTCAACATATTTTTCT-TTTGAGGAGCTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289067 247 - 5917169 TGTTCTT-AATATGTTTTAGTTTTCCCAGAGCT-------TAAAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGG--TTTTTCTTTCCACAGAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAGAGAATTTAAAGTTAATGTTAGGAAAGGCCTGAGGTGCTACATTTAAAAGGGATTGTGGCAAAGTCTGACTTCTT--TAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252490 257 - 10531588 TGTTCTT-AATATGTTTTAGTTTTCCCAGAGCTTAAATTCTAAAGTCAATTCATTTAGGTTGTGG-----AAATTAACTTGAGG-TTTTTTCTTTCCACAGAGCAAAATTAATGAATCATCTGTCCTTGTGAAAAATTTGTGATTCTGAAAGAATTTAAAATTCATGTTAGGAAAGGCCTGAGGTGCTACATTTAAAAGGGATTGTGGCAAAGTCTGACTTCTTAATAACTACTGTCTCAACATGTTTTTCT-TTTGAGAAGCAA i aotNan1.NW_018500622v1 C 0 I 136 s micMur3.chr20 54906930 257 + 72247402 CGTTCTTAAATATCTTTTAGATTTCCCAAAGCTTAAA-TCTGCTGTCAGTTCATTTAGGTTGTGG-----GAATTAACTTGAGA-GCTTTTCTTTCCACAGAGCAAAATTAATGAATCATCTGTCCCTGCGAAGAATTTGTGAGTCTGAAAGAATTTTAAAGCTATGCTAGGAAAAGCCTGAGGCGCTACACATAAAGGGGATTGTGGCAAAGTCTGAATTCTTAGTAACTACTGTCTCAACATGTTTTTCT-TTTGGGGAGCAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918260 257 + 9850184 TGTTCTTAAATATCTTTTAGATTTCCCAAAGCTTAAA-TCTGCAGTCAGTTCATTTAGGTTGTGG-----GAAATAACTTGAGA-GCATTTCTTTCCACAGAGCAAAATTAATGAATCATCTGTCCCTGCGAAGAATTTGTGATTCTGAAAGAATTTTAAAGCCATGCTAGGAAAAGCCTGAGGCGCTGCACATAAAGGGGATTGTGGTGAAGTCTGACTTCTTAGTAACTACTGTCTCAACATGTTTTTCT-TTTGAGGAGCAA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445687 227 - 129401213 TGTTCTCAAATATATTCTAGGTTTCCATAAACTTAAA-CCCAAAG-AGGTTTATTTAGGCTG-----------ATGCCCTGAGG-TTCTTTGTTTCCACAAAATGTGATTAATGAAGCATC-ATTCTGGTGAAGACTTTGTGTCTCTG-----ATTTTAAGCTCATTCTAGAGAAGACCTGAGGGGCTGCTTTGTAGAGAGATG------------------TTTGTAACTACTGTCTCAGCATGCTTTTCCATTTGACAAGAAA i mm10.chr8 I 198 C 0 s canFam3.chr5 80434079 262 + 88915250 TATTCTTAAATGCGTTTTAAGTTTCCCAAAGCTTAAA-TCAGCAGTCCGTTCATTTAGTTTGTGGGCAATGCACTAACTTTAGA-TCCTTTCTTTCCACAGACCAAAATTAATCAATCATCTGTCCCTATAAAGAATCTGGGCTTCTGAAAGAATTTTAAATCTATGCTAGGAAAGGCCTGAGGTATTAGGTCTAAAAGGAATTGTGGCAAAGTCTGACTTCTTAAAAACTACTGTCTCAACATGTTTTTCT-TTTGAAGAGCAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 899933 259 + 1009443 TGTTCTTAAAAAGGTTTTAGGTTTCCCAAAGCTTAAA-TCTATAGTTAGTTCATTTAGGTGGTAGGTAATGAATTTACCT-ATT-TCCTTTCTTTCCAAAGAGCAAACTTAATGAATCATCTGTCCTTGTGAAAAATTTGTGTGGCTAAAAGAATCTTAAATCTATGCAAGGAAAGGCCTGAGGTACTGCATATGAAAGGGATTGTGGTAAAGACTGTCTTCTTAGAAACTACTGTCTCAACATGTTTTC---TTTAAGAAGCAA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13673911 813 + 13852661 T a score=44208.000000 s hg38.chr16_GL383557v1_alt 20276 3 + 89672 TAA s panTro5.chr16 21446269 3 - 81586097 TAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513071 3 - 90481686 TAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746003 3 + 3010529 TAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858456 3 + 163208435 TAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332470 3 - 74971481 TAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041772 3 - 78541002 TAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14438970 3 + 26466322 TAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762475 3 + 43916225 TAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199081 3 + 75399963 TAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748057 3 - 7209941 TAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489671 3 + 3907144 TAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502019 3 - 44557958 CAA i calJac3.chr20 C 0 I 443 s saiBol1.JH378225 6303725 3 + 6628207 CAA i saiBol1.JH378225 C 0 I 3 s cebCap1.NW_016107433v1 3289314 3 - 5917169 CAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 1278736 3 + 10531588 TAA i aotNan1.NW_018500622v1 n 136 C 0 s micMur3.chr20 54907187 3 + 72247402 TGA i micMur3.chr20 C 0 I 1 s proCoq1.NW_012152729v1 2918517 3 + 9850184 TGA i proCoq1.NW_012152729v1 C 0 I 1 s mm10.chr8 22445914 3 - 129401213 TGA i mm10.chr8 C 0 I 1 s canFam3.chr5 80434341 3 + 88915250 TAA i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 900192 3 + 1009443 TAA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13673911 813 + 13852661 T a score=3560.000000 s hg38.chr16_GL383557v1_alt 20279 1 + 89672 -T s panTro5.chr16 21446272 1 - 81586097 -T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513074 1 - 90481686 -T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746006 1 + 3010529 -T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858459 1 + 163208435 -T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332473 1 - 74971481 -T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041775 1 - 78541002 -T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14438973 1 + 26466322 -T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762478 1 + 43916225 -T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199084 1 + 75399963 -T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748060 1 - 7209941 -T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489674 1 + 3907144 -T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 23055837 1 + 44557958 -T i calJac3.chr20 n 443 I 1 s saiBol1.JH378225 6303731 1 + 6628207 -T i saiBol1.JH378225 I 3 I 2 s cebCap1.NW_016107433v1 3289317 1 - 5917169 -T i cebCap1.NW_016107433v1 C 0 I 115 s aotNan1.NW_018500622v1 1278739 1 + 10531588 -T i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 900195 1 + 1009443 A- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80434344 1 + 88915250 I e micMur3.chr20 54907190 1 + 72247402 I e mm10.chr8 22445917 1 - 129401213 I e proCoq1.NW_012152729v1 2918520 1 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=101709.000000 s hg38.chr16_GL383557v1_alt 20280 7 + 89672 ATTCCAT s panTro5.chr16 21446273 7 - 81586097 ATTCCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513075 7 - 90481686 ATTCCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746007 7 + 3010529 ATTCCAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858460 7 + 163208435 ATTCCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332474 7 - 74971481 ATTCCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041776 7 - 78541002 ATTCCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14438974 7 + 26466322 ATTCCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762479 7 + 43916225 ATTCCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199085 7 + 75399963 ATTCCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748061 7 - 7209941 ATTCCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489675 7 + 3907144 ATTCCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 23055839 6 + 44557958 -TTTCAT i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6303734 7 + 6628207 CTTCCAT i saiBol1.JH378225 I 2 I 103 s aotNan1.NW_018500622v1 1278740 7 + 10531588 ATTCCAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54907191 7 + 72247402 ATTCCCT i micMur3.chr20 I 1 C 0 s proCoq1.NW_012152729v1 2918521 7 + 9850184 ATTCCCT i proCoq1.NW_012152729v1 I 1 C 0 s mm10.chr8 22445918 7 - 129401213 GTTCTAT i mm10.chr8 I 1 C 0 s canFam3.chr5 80434345 7 + 88915250 ACTCCAT i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 900196 7 + 1009443 ATTCCAT i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3289318 115 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1058448.000000 s hg38.chr16_GL383557v1_alt 20287 81 + 89672 ATATGGAATAAGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAGTGGGAGA-CTTCTGGTGCTTCTAGCAA-GCCTAT s panTro5.chr16 21446280 81 - 81586097 ATATGGAATAAGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAGTGGGAGA-CTTCTGGTGCTTCTAGCAA-GCCTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513082 81 - 90481686 ATATGGAATAAGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAGTGGGAGA-CTTCTGGTGCTTCTAGCAA-GCCTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746014 81 + 3010529 ATATGGAATAAGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAGTGAGAGA-CTTCTGGTGCTTCTAGCAA-GCCTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858467 81 + 163208435 ATATGGAATAAGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGCGCTTCTAGCAA-GCCTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332481 81 - 74971481 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGCGCTTCTAGCAA-GCCTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041783 81 - 78541002 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGCGCTTCTAGCAA-GCCTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14438981 81 + 26466322 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAGTGGGAGA-TTTCTGGTGCTTCTAGCAA-GCCTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762486 81 + 43916225 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGCGCTTCTAGCAA-GCCTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199092 81 + 75399963 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGTGCTTCTAGCAA-GCCTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748068 81 - 7209941 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGCACTTCTAGCAA-GCCTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489682 81 + 3907144 ATATGGAATAGGACCTGATGGCACACAACCCAAAGATTCTGGTGCCCAATGGGAGA-TTTCTGGCACTTCTAGCAA-GCCTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 23055845 80 + 44557958 ATATGG-ATAAGACCTGATGGCACACAACCCAAAGCCTCTGGTGTCCAATGGAAGG-TTTCTGGTGCTTCTAGCAA-GCCTAT i calJac3.chr20 C 0 n 0 s saiBol1.JH378225 324388 80 - 6628207 ATATGG-ATAAGACCTGATGGCACGTAACCCAAAGCCTCTGGTGCCCAATGGAAGG-TTTCTGGTGCTTCTAGCAA-GCCTAT i saiBol1.JH378225 n 103 C 0 s aotNan1.NW_018500622v1 1278747 80 + 10531588 ATATGG-ATAAGACCTGATGGCACACAACCCAAAGCCTCTGGTGCCTAATGGAAGG-TTTCTGGTGCTTCTTGCAA-GCCTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54907198 80 + 72247402 ATACGGAGTAAGGCCTGATAGCAC--AACCCAACGAATCTGGTGGCCAGGGGGAGA-CGTCTGGTGCTCCTAGTGACCCCTGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918528 79 + 9850184 ACACGGAGTAAGACCTGATGGCAC--AACCCAACGAATCTGGTGCCCCGTGACAGA-CGTCTGGTGCTCCTAGTGA-CACTGA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445925 69 - 129401213 ATAGGG---AAGACCTGATGATACACAACCCAGTGAATCTGGTGTCTGATGGGAGAGCCTGCTGAGCCCCTA----------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80434352 81 + 88915250 ATATGGAATAAGACTTGATGGCATACAATCCAATGAATCTGGTGCCCAGTGGGAAA-TTTCTGGTGCTCCTAGAGA-CCCTAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 900203 81 + 1009443 ATATGGAATAAGACCTGGTGGTATACAACCCAATGAGTCTGGTGCTCAGTGGAAGA-TTTCAGGTGTTCCTTGTGA-CCCTAT i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3289318 115 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=77520.000000 s hg38.chr16_GL383557v1_alt 20368 6 + 89672 GGAAGC s panTro5.chr16 21446361 6 - 81586097 GGAAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513163 6 - 90481686 GGAAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746095 6 + 3010529 GGAAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858548 6 + 163208435 GGAAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332562 6 - 74971481 GGAAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041864 6 - 78541002 GGAAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439062 6 + 26466322 GGAAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762567 6 + 43916225 GGAAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199173 6 + 75399963 GGAAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748149 6 - 7209941 GGAAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489763 6 + 3907144 GGAAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502465 5 - 44557958 AAAAG- i calJac3.chr20 I 443 C 0 s saiBol1.JH378225 324468 6 - 6628207 GGAAGC i saiBol1.JH378225 C 0 n 0 s aotNan1.NW_018500622v1 1278827 6 + 10531588 GGAAGC i aotNan1.NW_018500622v1 C 0 n 0 s micMur3.chr20 54907278 6 + 72247402 GGAAGC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918607 6 + 9850184 GGAAGC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445994 1 - 129401213 -----C i mm10.chr8 C 0 C 0 s canFam3.chr5 80434433 6 + 88915250 GGAAGC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 900284 6 + 1009443 GCAAGC i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3289318 115 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=147609.000000 s hg38.chr16_GL383557v1_alt 20374 13 + 89672 AACTGCAGCTGAG s panTro5.chr16 21446367 13 - 81586097 AACTGCAGCTGAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513169 13 - 90481686 AACTGCAGCTGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746101 13 + 3010529 AACTGCAGCTGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858554 13 + 163208435 AACTGCAGCTGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332568 13 - 74971481 AACTGCAGCTGAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041870 13 - 78541002 AACTGCAGCTGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439068 13 + 26466322 AACTGCAGCTGAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762573 13 + 43916225 AACTGCAGCTGAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199179 13 + 75399963 AACTGCAGCTGAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748155 13 - 7209941 AACTGCAGCTGAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489769 13 + 3907144 AACTGCAGCTGAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502470 13 - 44557958 AAATGCTGTTGAG i calJac3.chr20 C 0 I 4 s saiBol1.JH378225 6303844 13 + 6628207 AAATGCTGTTGAC i saiBol1.JH378225 I 103 I 4 s micMur3.chr20 54907284 12 + 72247402 CACTGC-GCTGAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918613 13 + 9850184 AACTGTGGCCGAG i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22445995 13 - 129401213 AATGACAGCTGAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80434439 13 + 88915250 AAACACAGCAGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 900290 13 + 1009443 AGCTGCAGCTGAA i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 1278833 0 + 10531588 I e cebCap1.NW_016107433v1 3289318 115 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1570827.000000 s hg38.chr16_GL383557v1_alt 20387 110 + 89672 CAGCAGTGCT----GTTCACTTCTGCTTCCTCATACTACAAG-----------------------------TGAAGAA--------------------------------------------------GAGTACTCA-------------------------CCAGTCTT------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT s panTro5.chr16 21446380 110 - 81586097 CAGCAGTGCT----GTTCACTTCTGCTTCCTCATACTATAAG-----------------------------TGAAGAA--------------------------------------------------GAGTACTCA-------------------------CCAGTCTT------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513182 110 - 90481686 CAGCAGTGCT----GTTCACTTCTGCTTCCTCATACTATAAG-----------------------------TGAAGAA--------------------------------------------------GAGTACTCA-------------------------CCAGTCTT------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746114 110 + 3010529 CAGCAGTGCT----GTTCACTTCTGCTTCCTCATACTACAAG-----------------------------TGAAGAA--------------------------------------------------GAGTACTCA-------------------------CCAGTCTT------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858567 110 + 163208435 GAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAA--------------------------------------------------GAGTACTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332581 113 - 74971481 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAA-----------------------------------------------GAGTACTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041883 113 - 78541002 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAA-----------------------------------------------GAGTACTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439081 113 + 26466322 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAA-----------------------------------------------GAGTACTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762586 113 + 43916225 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAG-----------------------------------------------GAGTACTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAAGAAGTTCTCAATAAATAATAGATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199192 113 + 75399963 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAA-----------------------------------------------GAGTAGTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748168 113 - 7209941 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAA-----------------------------------------------GAGTACTCA-------------------------CCAGTCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCaataaataatagatt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489782 114 + 3907144 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAGAA-----------------------------------------------GAGTACTCA-------------------------ACAGTCTC------------------TAGCTGATCAGAGAATTATTAAGAGGAAGTTCTCAATAAATAATAGATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502487 113 - 44557958 CAGCAATGCT----GTTCACTTCTTCTTCCTCATACTCCAAG-----------------------------TGAAGACAAG-----------------------------------------------GAGTCCTCA-------------------------CTAATCTC------------------CAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6303861 113 + 6628207 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAAAG-----------------------------------------------GAGTCCTCA-------------------------CTAATCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAATTCTCAATAAATAATAGATT i saiBol1.JH378225 I 4 C 0 s cebCap1.NW_016107433v1 3289433 113 - 5917169 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAAAG-----------------------------------------------GAGTTCTCA-------------------------CTAATCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAATTCTCAATAAATAATAGATT i cebCap1.NW_016107433v1 I 115 C 0 s aotNan1.NW_018500622v1 9252883 113 - 10531588 CAGCAATGCT----GTTCACTTCTGCTTCCTCATACTCCAAG-----------------------------TGAAGAAAAG-----------------------------------------------GAGTCCTCA-------------------------CTAATCTC------------------TAGCTGATCAGACAA-TATTAAGAGGAAGTTCTCAATAAATAATAGATT i aotNan1.NW_018500622v1 I 136 C 0 s micMur3.chr20 54907296 109 + 72247402 CACCAATGCT----GTCCACTTCCGCTTCCTCACACTC---------------------------------CAAAGGACGA-----------------------------------------------CAGGCCTCA-------------------------CCAGTCTC------------------TGGCTTGTAAGACAA-TATTAAGGGGAAGCTCTCAATAAATAATGGATT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2918626 113 + 9850184 CAGCAATGCT----GTCCACTTCTGCTTCCTCATACTCCAAG-----------------------------CAAAGAAGGA-----------------------------------------------GAGTCCTCA-------------------------CCAGTCTC------------------TAGCTTGTAAGACAA-TATTAAGGAGAAGCTCTCAATAAATAATGGATT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22446008 230 - 129401213 CAGCAATGCC----GTTCCAGTCTGATTCTTCACTTTCGAAAGCAAATCTTGTTTACAAAAATATTAATATTGAATAATAAGAAACTACAATAAGaagaaaatttttatgagcctgaggtcacatagtgagttcccagatagccaatgaaatatactgaagccttgtttcaaagaaaaacaaaaACAAAAACCAATGAAAGAA-TATTAAGGGGAGA--CTAAGTAAATAACAGATC i mm10.chr8 C 0 C 0 s canFam3.chr5 80434452 112 + 88915250 CAGCAGTACTATGCATCCACTTCTGCTTCCTCATAGTCTAAA-----------------------------CAAAGGA--------------------------------------------------CAGTCCTCT-------------------------TCAGTCTC------------------TAGCTTACAAGAC---TATTCAGGAGAGGTGTTCAATAAATAACAGATT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 900303 111 + 1009443 GAGCAATGCT----GTTCAC--CTGTTTCCTTATACACCAAG-----------------------------CAAAGTAGGA-----------------------------------------------GAGTCCTGA-------------------------CCAGTGTT------------------CAGCTTATAAGAAAA-TATTAGGGGGAGGCTCTCAATAAATAACAGAGT i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13673911 813 + 13852661 T a score=19000.000000 s hg38.chr16_GL383557v1_alt 20497 1 + 89672 C s panTro5.chr16 21446490 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513292 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746224 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858677 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332694 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041996 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439194 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762699 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199305 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748281 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489896 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502600 1 - 44557958 C i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303974 1 + 6628207 C i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289546 1 - 5917169 C i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252996 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54907405 1 + 72247402 C i micMur3.chr20 C 0 I 476 s proCoq1.NW_012152729v1 2918739 1 + 9850184 C i proCoq1.NW_012152729v1 C 0 I 258 s mm10.chr8 22446238 1 - 129401213 C i mm10.chr8 C 0 C 0 s dasNov3.JH569970 900414 1 + 1009443 C i dasNov3.JH569970 C 0 I 9 e canFam3.chr5 80434564 0 + 88915250 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=918406.000000 s hg38.chr16_GL383557v1_alt 20498 105 + 89672 T------------------------ggccaggc-acagtagctcacgcctgtaatcccagca-tttgggaaactgaggctggtggatcgcttgaggtcagaagttcgagaccagcctggccaacatggtga s panTro5.chr16 21446491 106 - 81586097 T------------------------ggccaggc-acagtggctcacgcctgtaatcccagcactttgggaagctgaggctggtggatcgcttgaggtcagaagttcgagaccagcctggccaacatggtga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513293 106 - 90481686 T------------------------ggccaggc-acagtggctcacgcctgtaatcccagcactttgggaagctgaggctggtggatcgcttgaggtcagaagttcgagaccagcctggccaacatggtga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746225 106 + 3010529 T------------------------ggccaggc-acagtggctcatgcctgtaatcccagtactttgggaagctgaggttggtggatcgcttgaggtcagaagtttgagaccagcctggccaacatggtga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858678 106 + 163208435 T------------------------ggccaggc-acagtggctcacgcctgtaatcccagcactttgggaagctgaggcaggtggatcgcttgaggtcaggatttcgagaccagcctggccaacatggtga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332695 92 - 74971481 T------------------------ggccaggc-gcagtgactcacacctgtaatcccagcactttgggaagctgaggcaggtggatcac--------------tcgagatcagcctggccaacatggcga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21041997 92 - 78541002 T------------------------ggccaggc-gcagtgactcacacctgtaatcccagcactttgggaagctgaggcaggtggatcac--------------tcgagatcagcctggccaacatggcga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439195 92 + 26466322 T------------------------ggccaggc-gcagtgactcacacctgtaatcccagcactttgggaagctgaggcaggtggatcac--------------tcgagatcagcctggccaacatggcga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762700 92 + 43916225 T------------------------ggccaggc-gcagtgactcacacctgtaatcccagcactttgggaagctgaggcaggtggatcac--------------tcgagatcagcctggccaacatggcga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199306 92 + 75399963 T------------------------ggccaggc-acagtgactcacacctgtaatcccagcactttgggaagctgaagcaggtggatcac--------------tcgagatcagcctggccaacatggcga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748282 92 - 7209941 t------------------------ggccaggc-gcagtgactcacacctgtaatcccagcactttgggaagctgaggcaggtggatcac--------------tcgagatcagcctggccaacatggcga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489897 92 + 3907144 T------------------------ggccaggt-gcagtgactcacacctgaaatcccagcactttgggaagctgaggcaggtggatcac--------------tcgaggtcagcctggccaacatggcga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502601 106 - 44557958 C------------------------ggccaggt-acagtggttcacacctgtaattctagcactttgtgaggcagaggcaggtggatcgcttgaggtcagcagttcaagaccagcctggccaacatggtga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6303975 107 + 6628207 TA-----------------------ggctgggc-acagtggctcacacctgtaatcctagcactttgggaggctgaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccatcacagtga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289547 107 - 5917169 TA-----------------------gaccgcgc-gcggtggtgcacgcctataatcctagcactttgggaggccgaggtgggtggatcacctgaggtcaggggttcaagaccagcctagccatcacggtga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9252997 106 - 10531588 C------------------------Agccaggt-gcagtggttcacacctgtaattctagcactttgggaggccgaggcaggtggattgcttgaggtcaggaattcgagaccagcctggccaacatggtga i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22446239 120 - 129401213 -TTACTGCATTAAAAAATGGGGTTGagccaggcagtggtggggcacacctttaatcccagcac-ttgggaggcagaggcaggtgaatttc---------tgagttcgaggccagcctggtctacacagtga i mm10.chr8 C 0 I 591 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=31875.000000 s hg38.chr16_GL383557v1_alt 20603 3 + 89672 aac s panTro5.chr16 21446597 3 - 81586097 aac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513399 3 - 90481686 aac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746331 3 + 3010529 aac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858784 3 + 163208435 aac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332787 3 - 74971481 aac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042089 3 - 78541002 aac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439287 3 + 26466322 aac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762792 3 + 43916225 aac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199398 3 + 75399963 aac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748374 3 - 7209941 aac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489989 3 + 3907144 aac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502707 3 - 44557958 aat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304082 3 + 6628207 aac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3289654 3 - 5917169 aac i cebCap1.NW_016107433v1 C 0 I 354 s aotNan1.NW_018500622v1 9253103 3 - 10531588 aac i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=690315.000000 s hg38.chr16_GL383557v1_alt 20606 88 + 89672 tccggctccactaaaaatacaaaaatta----------gccaggcgtggtggcgggtgcctgtaattccagctccttgggaggctgaggcaggagaat s panTro5.chr16 21446600 88 - 81586097 tccggctccactaaaaatacaaaaatta----------gccaggcgtggtggcgggtgcctgtaattccagctccttgagaagctgaggcaggagaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513402 88 - 90481686 tccggctccactaaaaatacaaaaatta----------gccaggcgtggtggcgggtgcctgtaattccagctccttgagaagctgaggcaggagaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746334 88 + 3010529 tccggctccactaaaaatacaaaaatta----------gccaggcgtggtggcaggtgcctgtaattccagctccttgggaggctgaggcaggagaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858787 88 + 163208435 tccaactccattaaaaatacaaaaatta----------gccaggcgtggtggcgggtgcctgtaatcccagccccttgggaggctgaggcaggagaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332790 88 - 74971481 cccgactccactaaaaatataaaaatta----------gccaggcgtggtggcacgtgcctgaaatcccagctccttgggaggctgaggcaggagaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042092 88 - 78541002 cccgactccactaaaaatataaaaatta----------gccaggcgtggtggcacgtgcctgaaatcccagctccttgggaggctgaggcaggagaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439290 88 + 26466322 cccgactccactaaaaatataaaaatta----------gccaggcgtggtggcacgtgcctgaaatcccagctccttgggaggctgaggcaggagaat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762795 88 + 43916225 cccgactccactaaaaatataaaaatta----------gccaggcgtggtggcacgttcctgaaatcccagctccttgggaggctgaggcaggagaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199401 88 + 75399963 cccgactccactaaaaatataaaaatta----------gccaggcgtggtggcacgtgcctgaaatcccagctccttgggaggctgaggcaggagaac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748377 88 - 7209941 cccgactccactaaaaatataaaaatta----------gccaggcgtggtggcacgtgcctgaaatcccagctccttgggaggctgaggcaggagaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 489992 88 + 3907144 cccaactccactaaaaatataaaaatta----------gccaggcgtggtggcgggtacctgtaatctcagctccttgggaggctgaggcaggagaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502710 87 - 44557958 cacatctctact-aaaatataaaaatta----------gccaggtgtggtgtcgggtacctgtaatcccggctcctcaggaggctgaggcaggaaaat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304085 97 + 6628207 cccatctttaaa-aaaaagaaaaTAATAATAGATTCCggccaggtgcagtggttcacacctgtaattctagcactttgggaagccgaggcaggtggat i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9253106 87 - 10531588 cccatctctact-aaaatacaaaaatta----------gccaggcgtggtgtcgggtacctgtaatcccagctcctcaggaggctgaggcaggaaaat i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=577356.000000 s hg38.chr16_GL383557v1_alt 20694 91 + 89672 tgcttgaacctgggaggtggaggttgcagtaagccgggatcgcgccactacgctccagcctgggcgacagagcaatactccatctc------agaaa s panTro5.chr16 21446688 91 - 81586097 tgcttgaacctgggaggtggaggttgcagtaagccgggatcgcgccactatgctccagcctgggcgacagagcaatactccatctc------agaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513490 91 - 90481686 tgcttgaacctgggaggtggaggttgcagtaagccgggatcgcgccactatgctccagcctgggcgacagagcaatactccatctc------agaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746422 91 + 3010529 tgcttgaacctgggaggtggaagttgcagtaagccgggatcgcgccactacactccagcctgggcgacacagcaatactccatctc------agaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53858875 91 + 163208435 tgcttgaacctgggaggtggaggttgcagtaaaccaggatcgcgccactacactccagcctaggtgacagggcaatactccatcac------aaaaa i nomLeu3.chr2 C 0 I 329 s rheMac8.chr20 21332878 91 - 74971481 tgcttgaacctgggaggcggaggttgcagtaagccgggatcacgccactacactccagcctgggtgacagagcaacactccatctc------aaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042180 91 - 78541002 tgcttgaacctgggaggcggaggttgcagtaagccgggatcacgccactacactccagcctgggtgacagagcaacactccatctc------aaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439378 91 + 26466322 tgcttgaacctgggaggcggaggttgcagtaagccgggatcacgccactacactccagcctgggtgacagagcaacacgccatctc------aaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762883 91 + 43916225 tgcttgaacctgggaggtggaggttgcagtaagccgggatcacgccactacactccagcctgggtgacagagcaacactccatctc------aaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199489 91 + 75399963 tgcttgaacctgggaggtggaggttgcagtaagccaggatcacgccactacactccagcctgggtgacagagcaacgttccatcta------aaaaa i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 490080 91 + 3907144 tgcttgaacctgggaggtggaggttgcagtaagccgggatcacgccactacactccagcctgggtgacagagcaatactccacctc------aaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502797 90 - 44557958 catttaaatccgggaggcagaggtt-tagtgagccaggattgcgccactacactccagcccaggcgacagagcaagactccgtttc------aaaaC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304182 66 + 6628207 cgcttgaggtcgggagttcaaga-------------------------------ccagcctggccaacatggtaaaaccccatctctactaaaatac i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9253193 91 - 10531588 cgtttaaacccgggaggcagaggttgcaatgagccaggattgcgccactacactccagctggggcgacagagcaagactccgtttt------aaaaC i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e manLeu1.NW_012101698v1 6748465 0 - 7209941 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=74120.000000 s hg38.chr16_GL383557v1_alt 20785 11 + 89672 TAATAATAATA s panTro5.chr16 21446779 11 - 81586097 TAATAATAATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513581 11 - 90481686 TAATAATAATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746513 11 + 3010529 TAATAATAATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859295 11 + 163208435 TAATAATAATA i nomLeu3.chr2 I 329 C 0 s rheMac8.chr20 21332969 11 - 74971481 TAATAATAATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042271 11 - 78541002 TAATAATAATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439469 11 + 26466322 TAATAATAATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762974 11 + 43916225 TAATAATAATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199580 11 + 75399963 TAATAATAATA i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 490171 11 + 3907144 TAATAGTAATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502887 11 - 44557958 taataataaca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304248 11 + 6628207 aaaaattagcc i saiBol1.JH378225 C 0 I 23 s aotNan1.NW_018500622v1 9253284 11 - 10531588 taataataata i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e manLeu1.NW_012101698v1 6748465 0 - 7209941 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=14196.000000 s hg38.chr16_GL383557v1_alt 20796 2 + 89672 At s panTro5.chr16 21446790 2 - 81586097 At i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513592 2 - 90481686 At i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746524 2 + 3010529 At i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859306 2 + 163208435 At i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332980 2 - 74971481 At i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042282 2 - 78541002 At i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439480 2 + 26466322 At i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20762985 2 + 43916225 At i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199591 2 + 75399963 At i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 490182 2 + 3907144 At i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6304282 2 + 6628207 at i saiBol1.JH378225 I 23 I 10 s aotNan1.NW_018500622v1 9253295 2 - 10531588 at i aotNan1.NW_018500622v1 C 0 I 10 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e manLeu1.NW_012101698v1 6748465 0 - 7209941 C e calJac3.chr20 21502898 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=128183.000000 s hg38.chr16_GL383557v1_alt 20798 21 + 89672 tgggaggctgaggcaggagaa s panTro5.chr16 21446792 21 - 81586097 tgggaggctgaggcaggagaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513594 21 - 90481686 tgggaggctgaagcaggagaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746526 21 + 3010529 tgggaggctgaggcaggagaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859308 21 + 163208435 tgggaggctgaggcaggagaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21332982 21 - 74971481 tgggaggctgaggcaggagaa i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21042284 21 - 78541002 tgggaggctgaggcaggagaa i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14439482 21 + 26466322 tgggaggctgaggcaggagaa i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20762987 21 + 43916225 tgggaggctgaggcaggagaa i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58199593 21 + 75399963 tgggaggctgaggcaggagaa i chlSab2.chr5 C 0 I 1 s colAng1.NW_012123265v1 490184 21 + 3907144 tgggaggctgaggcaggagaa i colAng1.NW_012123265v1 C 0 I 1 s saiBol1.JH378225 6304294 21 + 6628207 caggaggctgaggcaggaaaa i saiBol1.JH378225 I 10 I 1 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e aotNan1.NW_018500622v1 9253297 10 - 10531588 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e manLeu1.NW_012101698v1 6748465 0 - 7209941 C e calJac3.chr20 21502898 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=608285.000000 s hg38.chr16_GL383557v1_alt 20819 103 + 89672 cgcttgaacctgggaggcggaggttgcagtgagctgagatcgtgccattgcactccagcctgggcaagaagagtgaaactccgcctcaaa---aataagaaTTATT s panTro5.chr16 21446813 103 - 81586097 cgcttgaacctgggaggcagaggttgcagtgagctgagatcgtgccattgcactccagcctgggcaagaagagtgaaactccgcctcaaa---aataagaaTTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513615 103 - 90481686 cgcttgaacctgggaggcagaggttgcagtgagctgagatcgtgccattgcactccagcctgggcaagaagagtgaaactccgcctcaaa---aataagaaTTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746547 103 + 3010529 cgcttgaacctgggaggcggaggttgcagtgagctgagatcgtgccattgcactccagcctgggcaagaagagtgaaactccgcctcaaa---aaaaagaaTTATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859329 106 + 163208435 cgcttgaacctgggaggcggaggttgcagtgagctgagatagtgccactgcactccagcctgggcaagaagagtgaaactccgtctcaaaaataataataataata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333004 103 - 74971481 cgcttgaacctgggagacggaggttgcagtgagctgagatcacgctattgcactccagcctgggcaacaagagtggaactctgtctcaaa---aataataataata i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21042306 103 - 78541002 cgcttgaacctgggagacggaggttgcagtgagctgagatcacgctattgcactccagcctgggcaacaagagtggaactctgtctcaaa---aataataataata i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14439504 106 + 26466322 cgcttgaacctgggagatggaggttgcagtgagctgagatcacgccattgcactccagcctgggcaacaagagtggaactctgtctcaaaaataataataataata i macNem1.NW_012011355v1 I 1 C 0 s cerAty1.NW_011999143v1 20763009 100 + 43916225 cgcttgaacctgggagacggaggttgcagtaagctgagatcacgccattgcactccagcctgggcaacaagagtggaactctgtctcaaa---aaTAATAATA--- i cerAty1.NW_011999143v1 I 1 C 0 s chlSab2.chr5 58199615 106 + 75399963 cgcttgaacctgggagacggaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacaagagtggaactctgtctcaaacaaaaaaaaaattatt i chlSab2.chr5 I 1 C 0 s manLeu1.NW_012101698v1 6748465 106 - 7209941 cgcttgaacctgggagacggaggttgcagtgagctgagatcacgccattgcactccagcctgggcaacaagagtggaactctgtctcaaaaaaaataataataata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490206 103 + 3907144 cgcttgaacctgggagatggaggttgcagtgagctgagatcacgtcattgcactccagcctgggcaacaagagtggaactccgtctcaaa---aataataataata i colAng1.NW_012123265v1 I 1 C 0 s saiBol1.JH378225 6304316 98 + 6628207 catttaaacctgggaggcagaggttgcagtgagccaggattgcgccactacactccagcctgggtgac-agagcaagattccgtttcaaa---actactact---- i saiBol1.JH378225 I 1 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e aotNan1.NW_018500622v1 9253297 10 - 10531588 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e calJac3.chr20 21502898 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=90164.000000 s hg38.chr16_GL383557v1_alt 20922 20 + 89672 ATTATTATTA--ATAAACAAGC s panTro5.chr16 21446916 20 - 81586097 ATTATTATTA--ATAAACAAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513718 20 - 90481686 ATTATTATTA--ATAAACAAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746650 20 + 3010529 ATTATTATTA--ATAAATAAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859435 20 + 163208435 ataattatta--ataaataaGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333107 22 - 74971481 attattattattattaataaAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042409 22 - 78541002 attattattattattaataaAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439610 22 + 26466322 attattattattattaataaGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763109 19 + 43916225 ---ATTATTATTATTAATAAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199721 22 + 75399963 attattattattattaataAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748571 22 - 7209941 attattattattattaataaGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490309 22 + 3907144 ataataattattattaataaGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502898 15 - 44557958 -------ataataataataata i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304414 22 + 6628207 actactactactactaATAATA i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e aotNan1.NW_018500622v1 9253297 10 - 10531588 I e cebCap1.NW_016107433v1 3289657 354 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=78960.000000 s hg38.chr16_GL383557v1_alt 20942 8 + 89672 AATGGATT s panTro5.chr16 21446936 8 - 81586097 AATGGATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513738 8 - 90481686 AATGGATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746670 8 + 3010529 AATGGATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859455 8 + 163208435 AATGGATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333129 8 - 74971481 AACGGATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042431 8 - 78541002 AACGGATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439632 8 + 26466322 AACGGATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763128 8 + 43916225 AACGGATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199743 8 + 75399963 AACGGATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748593 8 - 7209941 AACGGATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490331 8 + 3907144 AATGGATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502913 8 - 44557958 aATGGATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304436 8 + 6628207 AATGCATT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290011 8 - 5917169 aATGGATT i cebCap1.NW_016107433v1 I 354 C 0 s aotNan1.NW_018500622v1 9253307 8 - 10531588 aATGGATT i aotNan1.NW_018500622v1 I 10 C 0 e canFam3.chr5 80434564 0 + 88915250 C e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=242360.000000 s hg38.chr16_GL383557v1_alt 20950 21 + 89672 CCCACTGCAATAAAAAAGGGA s panTro5.chr16 21446944 21 - 81586097 CCCACTGCAATAAAAAAGGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513746 21 - 90481686 CCCACTGCAATAAAAAAGGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746678 21 + 3010529 CCCACTGCAATAAAAAAGGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859463 21 + 163208435 CCCACTGCAATAAAAAAGGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333137 21 - 74971481 CCCACTGTAACAAAAAAGGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042439 21 - 78541002 CCCACTGTAACAAAAAAGGGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439640 21 + 26466322 CCCACTGTAACAAAAAAGGGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763136 21 + 43916225 CCCACTGTAACAAAAAAGGGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199751 21 + 75399963 CCCACTGTAACAAAAAAGGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748601 21 - 7209941 CCCACTGTAACAAAAAAGGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490339 21 + 3907144 TCCACTGTAACAAAAAAGGGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502921 21 - 44557958 CCCGTTGCAATAAAAAAAGGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304444 21 + 6628207 CCCACTGCAATAAAAAAGGGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290019 21 - 5917169 CCCACTGCAATAAAAAAGGGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9253315 21 - 10531588 CCCACTGCAATAAAAAAGGGA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80434564 21 + 88915250 CCTACTGTAACAAAAAAGGGA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900415 9 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=119922.000000 s hg38.chr16_GL383557v1_alt 20971 11 + 89672 AAGGGAGGGTT s panTro5.chr16 21446965 11 - 81586097 AAGGGAGGGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513767 11 - 90481686 AAGGGAGGGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746699 11 + 3010529 AAGGGAGGGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859484 11 + 163208435 AAGGGAGGGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333158 11 - 74971481 AAGGGAGAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042460 11 - 78541002 AAGGGAGAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439661 11 + 26466322 AAGGGAGAGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763157 11 + 43916225 AAGGGAGAGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199772 11 + 75399963 AAGGGAGAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748622 11 - 7209941 AAGGGAGAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490360 11 + 3907144 AAGTGAGAGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502942 11 - 44557958 AGGGGAGGGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304465 10 + 6628207 AGGGGA-GGTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290040 11 - 5917169 AGGGGAGGGTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9253336 11 - 10531588 AGGGGAGGGTT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80434585 11 + 88915250 AGGAGAGGATT i canFam3.chr5 C 0 I 405 s dasNov3.JH569970 900424 11 + 1009443 AAGGAAAGGCT i dasNov3.JH569970 I 9 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=33109.000000 s hg38.chr16_GL383557v1_alt 20982 3 + 89672 TAT s panTro5.chr16 21446976 3 - 81586097 TAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513778 3 - 90481686 TAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746710 3 + 3010529 TAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859495 3 + 163208435 TAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333169 3 - 74971481 TAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042471 3 - 78541002 TAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439672 3 + 26466322 TAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763168 3 + 43916225 TAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199783 3 + 75399963 TAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748633 3 - 7209941 TAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490371 3 + 3907144 TAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502953 3 - 44557958 TAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304475 3 + 6628207 TAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290051 3 - 5917169 TAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9253347 3 - 10531588 TAT i aotNan1.NW_018500622v1 C 0 I 324 s canFam3.chr5 80435001 3 + 88915250 TAA i canFam3.chr5 I 405 C 0 s dasNov3.JH569970 900435 3 + 1009443 TAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=325094.000000 s hg38.chr16_GL383557v1_alt 20985 26 + 89672 --GGAAACTGTTTTAAATGGAAAAG-AAA s panTro5.chr16 21446979 26 - 81586097 --GGAAACTGTTTTAAATGGAAAAG-AAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513781 26 - 90481686 --GGAAACTGTTTTAAATGGAAAAG-AAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746713 26 + 3010529 --GGAAACTGTTTTAAATGGAAAAG-AAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859498 26 + 163208435 --GGAAACTGTTTTAAATGGAAAAG-AAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333172 26 - 74971481 --GGAAACTGTTTTAAATGGAAAAG-AAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042474 26 - 78541002 --GGAAACTGTTTTAAATGGAAAAG-AAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439675 26 + 26466322 --GGAAACTGTTTTAAATGGAAAAG-AAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763171 26 + 43916225 --GGAAACTGTTTTAAATGGAAAAG-AAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199786 26 + 75399963 --GGAAACTGTTTTAAATGGAAAAG-AAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748636 26 - 7209941 --GGAAACTGTTTTAAATGGAAAAG-AAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490374 26 + 3907144 --GGAAACTGTTTTAAATGGAAAAG-AAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502956 27 - 44557958 --GGAAACTGTTTTAAATGGAAAAGAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304478 27 + 6628207 --GGAAACTGTTTTAAATGGAAAAGAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290054 27 - 5917169 --GGAAACTGTTTTAAATGGAAAAGAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9253674 27 - 10531588 --GGAAACTGTTTTAAATGGAAAAGAAAA i aotNan1.NW_018500622v1 I 324 C 0 s canFam3.chr5 80435004 26 + 88915250 --GGAAGCTATTTTAAATGGAAAAG-AAA i canFam3.chr5 C 0 I 410 s dasNov3.JH569970 900438 28 + 1009443 GAAAAACTTGTTTTCAATGGGGAAG-AAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=297834.000000 s hg38.chr16_GL383557v1_alt 21011 26 + 89672 -GGCAAAAATCCAAAGGTTAATACTAT s panTro5.chr16 21447005 26 - 81586097 -GGCAAAAATCCAAAGGTTAATACTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513807 26 - 90481686 -GGCAAAAATCCAAAGGTTAATACTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746739 26 + 3010529 -GGCAAAAATCCAAAGGTTAATACTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859524 26 + 163208435 -GGCAAAAATCCAAAGGTTAATACTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333198 26 - 74971481 -GGCAAAAATCCAAAGGTTAATACTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042500 26 - 78541002 -GGCAAAAATCCAAAGGTTAATACTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439701 26 + 26466322 -GGCAAAAATCCAAAGGTTAATACTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763197 26 + 43916225 -GGCAAAAATCCAAAGGTTAATACTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199812 26 + 75399963 -GGCAAAAATCCAAAGGTTAATACTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748662 26 - 7209941 -AGCAAAAATCCAAAGGTTAATACTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490400 26 + 3907144 -GGCAAAAATCCAAAGTTTAATACTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21502983 26 - 44557958 -GGCAAAAATTCAAAAGTTAATACTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304505 26 + 6628207 -GGCAAAAATTCAAAGTTTAGTACTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290081 26 - 5917169 -GGCAAAAATTCAAAGGTTAATAATAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9253701 26 - 10531588 -CGCAAAAATTCAAAGGTTAATACTAt i aotNan1.NW_018500622v1 C 0 I 861 s dasNov3.JH569970 900466 27 + 1009443 AAGCACAAATCCAAAGGTTAACACTAT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=24440.000000 s hg38.chr16_GL383557v1_alt 21037 4 + 89672 CTGT s panTro5.chr16 21447031 4 - 81586097 CTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513833 4 - 90481686 CTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746765 4 + 3010529 CTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859550 4 + 163208435 CTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333224 4 - 74971481 CTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042526 4 - 78541002 CTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439727 4 + 26466322 CTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763223 4 + 43916225 CTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199838 4 + 75399963 CTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748688 4 - 7209941 CTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490426 4 + 3907144 CTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503009 4 - 44557958 TTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304531 4 + 6628207 TTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290107 4 - 5917169 TTTT i cebCap1.NW_016107433v1 C 0 C 0 s dasNov3.JH569970 900493 4 + 1009443 TTTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=539693.000000 s hg38.chr16_GL383557v1_alt 21041 74 + 89672 AAAAATTCCAGAACCACAcacagtggc--------------tcagtctgtaatcccagcactttgggaggcttaggt-aggaggatcac s panTro5.chr16 21447035 74 - 81586097 AAAAATTCCAGAACCACAcacagtggc--------------tcagtctgtaatcccagcactttgggaggcttaggt-aggaggatcac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513837 74 - 90481686 AAAAATTCCAGAACCACAcacagtggc--------------tcagtctgtaatcccagcactttgggaggcttaggt-aggaggatcac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746769 74 + 3010529 AAAAATTCCAGAACCACAcacagtggc--------------tcagtctgtaatcccagcactttgggaggcttaggt-aggaggatcac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859554 74 + 163208435 AAAAATTCCAGAACCATGTACTTtggc--------------tcagtctgtaatcccagtactttgggaggcttaggt-aggaggattgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333228 72 - 74971481 AAAAATTCCAGAACT--GTAcagtggc--------------tcagtctgtaatcccagcactttgggagacttaggt-aggaggatcgc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042530 72 - 78541002 AAAAATTCCAGAACT--GTAcagtggc--------------tcagtctgtaatcccagcactttgggagacttaggt-aggaggatcgc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439731 72 + 26466322 AAAAATTCCAGAACT--GTAcagtggc--------------tcagtctgtaatcccagcactttgggagacttaggt-aggaggatcgc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763227 72 + 43916225 AAAAATTCCAGAACC--GTAcagtggc--------------tcagtctgtaatcccagcactttgggagacttaggt-aggaggatcgc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199842 72 + 75399963 AAAAATTCCAGAACC--GTAcagtggc--------------tcagtctgtaatcccagcactttgggagacttaggt-aggaggatcgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748692 72 - 7209941 AAAAATTCCAGAACA--GTAcagtggc--------------tcagtctgtaatcccagcactttgggagacttaggt-aggaggattgc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490430 72 + 3907144 AAAAATTCCTGAACC--gcacagtggc--------------tcagtctgtaatcccaccactttgggagacttaggt-aggaggatcgc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503013 65 - 44557958 AAAAATTCCAGAACC--------Aggc--------------tcagtctgtaatcctagcactttgggaggctgaggc-agt-agatcac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6304535 80 + 6628207 AAAAATTCCAGAACC--------Aggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggt-ggatcac i saiBol1.JH378225 C 0 M 689 s cebCap1.NW_016107433v1 3290111 66 - 5917169 ATAAATTCCAGAACC--------Aggc--------------ttagtctgtaatcccagcactttgggaggctgaggc-agtaggatcac i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=616375.000000 s hg38.chr16_GL383557v1_alt 21115 85 + 89672 ttgaggccagaaattcaaggcaagcctgggcaacagagcaatatcctgtctctgc-aaaacaattaaaaaattagccaggcatggt s panTro5.chr16 21447109 85 - 81586097 ttgaggccagaaattcaaggcaagcctgggcaacacagcaagatcctgtctctgc-aaaaaaattaaaaaattagccaggcatggt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513911 85 - 90481686 ttgaggccagaaattcaaggcaagcctgggcaacagagcaagatcctgtctctgc-aaaaaaaattaaaaattagccaggcatggt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746843 85 + 3010529 ttgaggccagaaattcaaggcaagcctgggcaacagagcaagatcctgtctctgc-aaaaaaattaaaaaattagccaggcatggt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859628 85 + 163208435 ttgaggccagaaattgaaggcaagcctgggtaacagagcaagatcctgtctctac-aaaaaaattaaaaaattagccaggcatggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333300 86 - 74971481 ttgaggccagaaattcaaggcaagcctgggcaacacagcaagatcctgtctctacaaaaaaaattttttaattagccaggcatggt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042602 86 - 78541002 ttgaggccagaaattcaaggcaagcctgggcaacacagcaagatcctgtctctacaaaaaaaattttttaattagccaggcatggt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439803 86 + 26466322 ttgaggccagaaattcaaggcaagcctgggcaacacagcaagatcctgtctctacaaaaaaaattttttaattagccaggcatggt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763299 86 + 43916225 ttgaggccagaaattcaaggcaagcctgggcaacaaagcaagatcctgtctctacaaaaaaaatttttaaattagccaggcatggt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58199914 86 + 75399963 ttgaggccagaaattcaaggcaagcctgggcaacacagcaagatcctgtctctacaaaaaaaatttaaaaattagccaggcatggt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748764 86 - 7209941 ttgaggccagaaattcaaggcaagcctgggcaacacagcaagatcctgtctctacaaaaaaaatttttaaattagccaggcatggt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490502 86 + 3907144 ttgaggccagaaattcaaggcaagtctgggcaacacagcaagatcctgtctctacaaaaaaaattaaaaaattagccaggcatggt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503078 86 - 44557958 ttagggccagaaagtcaagaccagcctgggcaacagagcaagatcctgtctccacaaaaaaaattaaaaaattagtaaggcatggt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3290177 86 - 5917169 ttggggccagaaagtgaagaccagcctgggcaacagagcaagatcctgtctccataaaaaaaattaaaaaattagtaaggcatggt i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e saiBol1.JH378225 6304615 689 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=1696740.000000 s hg38.chr16_GL383557v1_alt 21200 237 + 89672 gacatgtaccactaattccagctactcgagaggctaaggcaggaggattgcttaaggtcaggaggtcaaaactagttacagtgagctataatcatgccagtgcactccagcccaggagacagagtgagaccctgtctcttaaaa-----taaacaaaacaa-aaCAACAATAAC-----AAAAACgctgggcg-cagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac s panTro5.chr16 21447194 242 - 81586097 gacatgtaccactaattccagctactcgagaggctaaggcaggaggattgcttaaggccaggaggtcaaaactagttacagtgagctataatcatgccagtgcactccagcctaggagacagagtgagaccctgtctcttaaaaaaaacaaaacaaaacaa-aaCAACAATAAC-----AAAAACgctgggcg-cagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21513996 242 - 90481686 gacatgtaccactaattccagctactcgagaggctaaggcaggaggattgcttaaggtcaggaggtcaaaactagttacagtgagctataatcatgccagtgcactccagcccaggagacagagtgagaccctgtctcttaaaaaaaacaaaacaaaacaa-aaCAACAATAAC-----AAAAACgctgggcg-cagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 746928 236 + 3010529 gacatgtaccactaattccagctactcgagaggctaaggcaggaggattgcttaaggtcaggaggtcaaaactagttacagtgagctataatcatgccagtgcactccagcccaggagacagagtgagaccctgtctcttaaaa------aaacaaaacaa-aacaacaacaac-----aaaAACActgggcg-cagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagatcac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859713 232 + 163208435 gacatgtaccactagttccagctactcgagaggctaaggc---aggactgcttaaggccaggaggtcaaagctagctacagtgagatataattatgccagtgcactccagcccaggagaca----gagaccctgtctcttaaaa----caaaacaacacaacaacaacaacaac-----aaaaacTctgggtg-cagtggctcacgcctgtactcccagcactttgggaggctgaggtgggcagatcac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333386 242 - 74971481 gacatgtaccactagttccagctactcgagaggctaa-acaggaggattgcttaaggccaggaggtcaaagctagctatagtgagctataatcatgccagtgcactcctgcccaggagacagagtgagaccctgtctcttaaaaa---caaaacaaaacaa-aaCAACAACAAC-AAAAAAAAACActgggca-cagtggctcactcaggtaatcccagcactttgggaggccgaggcaggcagatcac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042688 241 - 78541002 gacatgtaccactagttccagctactcgagaggctaa-gcaggaggattgcttaaggccaggaggtcaaagctagctatagtgagctataatcatgccagtgcactcctgcccaggagacagagtgagaccctgtctcttaaaaa---caaaacaaaacaa-aaCAACAACAAC--AAAAAAAACActgggca-cagtggctcactcaggtaatcccagcactttgggaggccgaggcaggcagatcac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14439889 241 + 26466322 gacatgtaccactagttccagctactcgagaggctaa-gcaggaggattgcttaaggccaggaggtcaaagctagctatagtgagctataatcatgccagtgcactcctgcccaggagacagagtgagaccctgtctcttaaaaa---caaaacaaaacaa-aaCAACAACAAC--AAAAAAAACActgggca-cagtggctcactcaggtaatcccagcactttgggaggccgaggcaggcagatcac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763385 240 + 43916225 gacatgtaccactagttccagctactcgagaggctaa-gcaggaggattgcttaaggccaggaggtcaaagctagctatagtgagctataatcatgccagtgcactcctgcccaggacacagagtgagaccctgtctcttaaaaa----aaaacaaaacaa-aacaacaacaac--aacaaaaacactgggca-cagtggctcactcaggtaatcccagcactttgggagaccgaggcgggcagatcac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200000 238 + 75399963 aacatgtaccactagttccagctactcgagaggctaa-gcaggaggattgcttaaggccaggaggtcaaagctagctatagtgagctataatcatgccagtacactcctgcccaggagaca----gagacactgtctcttaaaaa----aaaaaacaaaac-aacaacaacaacaaaaaaaaaacactgggcg-cagtggctcactcaggtaatcccagcactttgggaggccgaggcgggcagatcac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6748850 240 - 7209941 gacatgtaccactagttccagctactcaagaggctaa-gcaggaggattgcttaaggccaggaggtcaaagctagctatagtgagctataatcatgccagtgcactcctgcccaggagacagagtgagaccctgtctcttaaaaa----aaaacaaaacaa-aaCAACAACAAC--AAAAAAAACActgggca-cagtggctcactcaggtaatcccagcactttgggaggccgaggcgggcagatcac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490588 238 + 3907144 gacatgtaccactagttccagctactcgagaggctaa-gcaggaggactgcttaaggccaggaggtcaaagctagctacagtgagctataatcatgccagtgcactcctgcccaggagacagagtgagaccctgtctcTTAAAAa----acaacaaca-ac-aacaacaacaac---aacaaAACgctgggtg-cagtggctcactcaggtaatcccagcactttgggaggccgaggtgggcagatcac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503164 189 - 44557958 aacatgtacctgta----------------------------gagaattgcttaagcccgggaggtcaaagctagctatagtaagctgtaatcgttccagcacactccagcccaaaagacagactgagaccctgtttctaa---a--------------aa-aaaaaaaaTGGT-------------CGgggcacagtggctaactcctgcaatcccagtactttgggagg-caaggcgggcaattcac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6305309 219 + 6628207 gacatgtacctgtagttccagctactccagaggctaaggcaggagaattgcttaagcccaggaggtcaaagctaactacaataagctataatcattccagcgcactccagaccgaaagacagactgagaccctgtttctaa-aca--------------aa-aaaaaaaaTggt-------------cgggtt-tggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcaattcgc i saiBol1.JH378225 M 689 C 0 s cebCap1.NW_016107433v1 3290263 220 - 5917169 gacatgtaactgtagttccagctactccagaggctaaggcaggagaattgcttaagcccaggaggtcaaatctagctacagtaagctataatcgttccagcgcactccagcccaaaagacagactgagaccctgtttctaaaaaa--------------aa-aaaaaaaaTggt-------------cgggca-cggtggctctcgcctgtcatcccagcactttgggaggctaaggcgggcaattcac i cebCap1.NW_016107433v1 C 0 I 18 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=155367.000000 s hg38.chr16_GL383557v1_alt 21437 24 + 89672 ctgaggtcaggagttcgagaccag s panTro5.chr16 21447436 24 - 81586097 ctgaggtcaggagttcgagaccag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514238 24 - 90481686 ctgaggtcaggagttcgagaccag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747164 24 + 3010529 ctgaggtcaggagttcgagaccag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859945 24 + 163208435 ctgaggtcaggagttcgagaccag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333628 24 - 74971481 ctgaggtcaggagttcgagaccag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042929 24 - 78541002 ctgaggtcaggagttcgagaccag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440130 24 + 26466322 ctgaggtcaggagttcgagaccag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763625 24 + 43916225 ctgaggtcaggagttcgagaccag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200238 24 + 75399963 ctgaggtcaggagttcgagaccag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749090 24 - 7209941 ctgaggtcaggagttcgagaccag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490826 24 + 3907144 ctgaggtcaggagttcgagaccag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503353 18 - 44557958 --agggcctagagatcaaga---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6305528 18 + 6628207 --agggctgagagatcaaga---- i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e cebCap1.NW_016107433v1 3290483 18 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1227415.000000 s hg38.chr16_GL383557v1_alt 21461 149 + 89672 cctagccaacacggcaaaaccccatttctactaaaagtacaaaaattagc-------caggcgtggtggtgggcgcctgtaatcccagctact-aggaggctgaggcaggagaattgcttgaatccgggagatggaggttgcagtgagctgagatcg s panTro5.chr16 21447460 150 - 81586097 cctagccaacacggcaaaaccccatttctactaaaagtacaaaaattagc-------cgggcgtggtagtgggcgcctgtaatcccagctactcaggaggttgaggcaggagaattgcttgaatccgggagatggaggttgcagtgagctgagatcg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514262 150 - 90481686 cctagccaacacggcaaaaccccatttctactaaaagtacaaaaattagc-------cgggcgtggtagtgggcgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaatccgggagatggaggttgcagtgagctgagatcg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747188 150 + 3010529 cctagccaacacggcaaaaccccatttctactaaaagtacaaaaattagc-------cgggcgtggtggtgggcgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaatccgggagatggaggttgcagtgagctgagatcg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53859969 150 + 163208435 cctagccaacatggcaaaaccccatctctactaaaagtacaaaaattagc-------cgggtgtggtggtgggtgtctgtaatcccagctactcaggaggctgaggcaggagaactgcttgaacctcagaggtggaggttgcagtgagctgagatcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333652 150 - 74971481 cctggccaacatggcgaaatcccatctctactaaaagtacaaaaattagc-------caggtgtggtggtgggcacctgtaatctcagctactcaggaggctgaggcaggagaatggcttgaacctggaaggtggaggttgcagtgagctgagatca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21042953 150 - 78541002 cctggccaacatggcgaaatcccatctctactaaaagtacaaaaattagc-------caggtgtggtggtgggcacctgtaatctcagctactcaggaggctgaggcaggagaatggctggaacctggaaggtggaggttgcagtgagctgagatca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440154 150 + 26466322 cctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagc-------caggcgtggtggcacatgcctgtagtctcagctccttggggggctgaagcacaagaattgcttgaacccgggaggcagaggttgcaatgagctgagatcg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20763649 150 + 43916225 cctggccaacatggtgaaatcccatctctactaaaagtacaaaaattagc-------caggtgtggtggtgggcacctgtaatttcagctactcgggaggctgaggcaggagaatggcttgaacctggaaggtggaggttgcagtgagctgagatca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200262 148 + 75399963 cctggccaacatggcaaaatcccatctctactaaaagtacaaaaattagc-------caggtgtggtggtgggcacctgtaatctcagctactcaggaggctgaggcaggagaatagcttgaacctggaaggtggaggttgcagtgagct--gatca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749114 150 - 7209941 cctggccaacatggcgaaatcccatctctactaaaagtacaaaaattagc-------caggtgtggtggtgggcacctgtaatctcagctactcaggaggctgaggcaggagaatggcttgaacctggaaggtggaggttgcagtgagctgagatca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 490850 150 + 3907144 cctggccaacatggcgaaatcccatctctactaaaagcacaaaaattagc-------caggtgtggtggtgggcgcctgtaatcctagctactcaggaggctgaggcaggagaatggcttgaacctggaaggtggaggttgcaatgagctgagatca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503371 150 - 44557958 cctggccaacatggtgaaaccccatctctactaaaattataaaacttaac-------taggcatggtggcatgtacctgtagtcccagctacttgggaggccgaggcaggagaattgcttgaacccaagaggtggaggttgcagtgagccaagatcg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6305546 157 + 6628207 cctggccaacatggtgaaaccccatctctactaaaattataaaacttagctaagcattaagcatggtggcatgcacctgtagccccagctacttgggaggccgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagctaagatcg i saiBol1.JH378225 C 0 I 38 s cebCap1.NW_016107433v1 3290501 150 - 5917169 catggccaacatgacgaaaccccatctctactaaaattacaaaatttagc-------taggcatggcggcatgcacctgtagttccagctacttgggaggccgaggcaggagaatcgcttgaacccaggaggtggaggttacagtgagccaagatcg i cebCap1.NW_016107433v1 I 18 I 36 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=-3595.000000 s hg38.chr16_GL383557v1_alt 21610 1 + 89672 -c s panTro5.chr16 21447610 1 - 81586097 -c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514412 1 - 90481686 -c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747338 1 + 3010529 -c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860119 1 + 163208435 -c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333802 1 - 74971481 -t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043103 1 - 78541002 -t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440304 1 + 26466322 -c i macNem1.NW_012011355v1 C 0 I 44 s cerAty1.NW_011999143v1 20763799 1 + 43916225 -t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200410 1 + 75399963 -t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749264 1 - 7209941 -t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491000 1 + 3907144 -c i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503521 1 - 44557958 A- i calJac3.chr20 C 0 I 14 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e cebCap1.NW_016107433v1 3290651 36 - 5917169 I e saiBol1.JH378225 6305703 38 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=244501.000000 s hg38.chr16_GL383557v1_alt 21611 66 + 89672 gcccctgagc-tctagcctgggcaacaagagcgagactctgtctc------aaaaaaaaag-------------aaaaCAggctgt s panTro5.chr16 21447611 66 - 81586097 gccactgcgc-tctagcctgggcaacaagagcgagactctgtctc------aaaaaaaaag-------------aaaaCAggctgt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514413 64 - 90481686 gccactgcgc-tctagcctgggcaacaagagcgagactctgtctc------aaaaaaaa---------------gaaaCAggctgt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747339 66 + 3010529 accactgcgc-tctagcctgggcaacaagagagagactctgtctc------aaaaaaaaag-------------aaaaCAggctgt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860120 66 + 163208435 accactgtgc-tctagcctgggcgacaagagcgagactgtctcaa------aaaaaaaaag-------------aaaaCAggctgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333803 85 - 74971481 gccactgtgc-tccaccctgggtgataagagcaagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaGCCCAAAAATAggcggt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043104 85 - 78541002 gccactgtgc-tccagcctgggtgataagagcaagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaGCCCAAAAATAggcggt i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20763800 79 + 43916225 gccactgtgc-tccagcctgggtgacaagagcaagactctgtctc------aaaaaaaaaaaaaaaaaaGCCCAAAAATAggcggt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200411 81 + 75399963 gccactgcgc-tccagcctgggtgacaagagcaagactctgtctc----aaaaaaaaaaaaaaaaaaaaGCCCAAAAATAggctgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749265 79 - 7209941 gccactgcgc-tccagcctgggtgacaagagcaagactctgtctc------aaaaaaaaaaaaaaaaaaGTCCAAAAATAggcagt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491001 82 + 3907144 gccactgcgc-tccagcctgggtgacaagagcgagactctgtctc---aaaaaaaaaaaaaaaaaaaaaGCCCCAAAACAggctgt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503536 28 - 44557958 GCCACTTGACATCCAATTTTGG----------GAGACt------------------------------------------------ i calJac3.chr20 I 14 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e cebCap1.NW_016107433v1 3290651 36 - 5917169 I e macNem1.NW_012011355v1 14440305 44 + 26466322 I e saiBol1.JH378225 6305703 38 + 6628207 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=5599.000000 s hg38.chr16_GL383557v1_alt 21677 2 + 89672 -gc s panTro5.chr16 21447677 2 - 81586097 -gc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514477 2 - 90481686 -ac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747405 2 + 3010529 -gc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860186 2 + 163208435 -gc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333888 2 - 74971481 -gc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043189 2 - 78541002 -gc i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20763879 2 + 43916225 -gc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200492 2 + 75399963 -gc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749344 2 - 7209941 -gc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491083 2 + 3907144 -gc i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3290687 2 - 5917169 GG- i cebCap1.NW_016107433v1 I 36 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e macNem1.NW_012011355v1 14440305 44 + 26466322 I e saiBol1.JH378225 6305703 38 + 6628207 I e calJac3.chr20 21503564 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=9948.000000 s hg38.chr16_GL383557v1_alt 21679 2 + 89672 ac s panTro5.chr16 21447679 2 - 81586097 ac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514479 2 - 90481686 ac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747407 2 + 3010529 ac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860188 2 + 163208435 ac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333890 2 - 74971481 ac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043191 2 - 78541002 ac i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20763881 2 + 43916225 ac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200494 2 + 75399963 ac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749346 2 - 7209941 ac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491085 2 + 3907144 ac i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6305741 2 + 6628207 AG i saiBol1.JH378225 I 38 C 0 s cebCap1.NW_016107433v1 3290689 2 - 5917169 AG i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e aotNan1.NW_018500622v1 9253727 861 - 10531588 I e macNem1.NW_012011355v1 14440305 44 + 26466322 I e calJac3.chr20 21503564 0 - 44557958 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=3202730.000000 s hg38.chr16_GL383557v1_alt 21681 408 + 89672 agtggctcacacctttaatcctagaactttgggaggctaaggtaggaggatcagttaaggccaggagttcaagatgagcctgggaaacatggcaaaaccctgtatctacaaaaaata-caaaatttatcagatgtggccaggcgtgctgggtcacgcctataatcccaatactttgggaggctgaggcgggcagatcacttgaggccaggaggtcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacctgggaggctgaagcacgagaattgcttgaacccgggaggcagaggttgcagtgaaccaagatcatgccactgcactccagcctgggagacagagcgagac s panTro5.chr16 21447681 408 - 81586097 agtggctcacacctttaatcctagaactttgggaggctaaggtaggaggatcagttaaggccaggagttcaagatgagcctgggaaacatggcaaaaccctgtatctacaaaaaata-caaaatttatcagatgtggccaggcgtgttgggtcacgcctataatcccaatactttgggaggctgaggcgggcagatcacttgaggccaggaggtcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacctgggaggctgaagcacgagaattgcttgaacccgggaggcagaggttgcagtgaaccaagatcatgccactgcactccagcctgggagacagagcgagac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514481 407 - 90481686 agtggctcacacctttaatcctagaactttgggaggctaaggtaggaggatcagttaaggccaggagttcaagatgagcctgggaaacatggcaaaaccctgtatctac-aaaaata-caaaatttatcagatgtggccaggcgtgttgggtcacgcctataatcccaatactttgggaggctgaggcgggcagatcacttgaggccaggaggtcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacctgggaggctgaagcacgagaattgcttgaacccgggaggcagaggttgcagtgaaccaagatcatgccactgcactccagcctgggagacagagcgagac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747409 408 + 3010529 agtggctcacacctttaatcctagaactttggaaggctaaggtaggaggatcaattaaggccaggagttcaagatgagcctgggaaacatggcaaaaccctgtatctacaaaaaata-caaaatttatcagatgtggccaggcgtgttgggtcacgcctataatcccagtactttgggaggctgaggcgggcagatcacttgaggccaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacctgggaggctgaagcatgagaattgcttgaacccaggagggagaggttgcagtgaaccaagatcatgccactgcactccagcctgggagacagagcgagac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860190 408 + 163208435 agtagctcacacctttaattctagaactttgggaggccaaggtatgaggatcaattaaggccaggagatcaagatgagcctgggaaatgtggcaaaaccctgtatctacaaaaaata-caaaatttatcagatgtggccgggcatgttgggtcacgcctataatcccagtattttaggaggctgaggcaggcagatcatttgaggccaggagttcgagaccagcctggccaacatagcgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggcacatgcctgtagtctcagctacttgggaggctgaagcacaagaattgcttgaacccgggaggcagaggttgcagtgaattgagatcacgccactgcattccagcctgggcgaaagagcgagac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21333892 381 - 74971481 agtggctcacacctttaatcctagaactttgggaggccaaggtaggaggatcaattaggggcaggagttccagatgagcctgggaaacatggc---------------------------aaaaTTATCAGATGTggctgggcgtgttgggtcacacctgtaatcccagtactttgggaggctgaggtgggcagatcacttgagtcgaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacttggggggctgaagcacaagaattgcttgaacccgggaggcagaggttgcaatgagctgagatcgcaccac-acactccagcctgggcgacagagcgagac i rheMac8.chr20 C 0 I 10 s macFas5.chr20 21043193 381 - 78541002 agtggctcacacctttaatcctagaactttgggaggccaaggtaggaggatcaattaggggcaggagttccagataagcctgggaaacatggc---------------------------aaaaTTATCAGATGTggctgggcgtgttgggtcacacctgtaatcccagtactttgggaggctgaggtgggcagatcacttgagtcgaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacttggggggctgaagcacaagaattgcttgaacccgggaggcagaggttgcaatgagctgagatcgcaccac-acactccagcctgggcgacagagcgagac i macFas5.chr20 C 0 I 2 s cerAty1.NW_011999143v1 20763883 381 + 43916225 agtggctcacacctttaatcctagaactttgggaggccaagctaggaggatcaattaggggcaggagttccagatgagcctgggaaacatggc---------------------------aaaaTTATCAGATGTggctgggcgtgttgggtcacacctgtaatcccagtactttgggaggctgaggtgggcagatcacttgagtcgaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacttggggggctgaagcacaagaattgcttgaacccgggaggcagaggttgcaatgagctgagatcgcaccac-acactccagcctgggcgacagagtgagac i cerAty1.NW_011999143v1 C 0 I 10 s chlSab2.chr5 58200496 381 + 75399963 agtggctcacacctttaatcctagaactttgggaggccaaggtaggaggatcaattaggggcaggagttccagatgagcctgggaaacatggc---------------------------aaaaTTATCAGATGTggctgggcatgttgggtcacacctgtaatcccagtactttgggaggctgaggtgggcagatcatttgagtcgaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggcacatgcctgtagtctcagctacttggggggctgaagcacaagaattgcttgaacccgggaggcagaggttgcaatgagctgagatcgcaccac-acactccagcctaggcgacagagcgagac i chlSab2.chr5 C 0 I 10 s manLeu1.NW_012101698v1 6749348 381 - 7209941 agtggctcacacctttaatcctagaactttgggaggccaaggtaggaggatcaattaggggcaggagttccagatgagcctgggaaacatggc---------------------------aaaaTTATCAGATGTggctgggcgtgttgggtcacacctgtaatcccagtactttgggaggctgaggtgggcagatcacttgagtcgaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacttggggggctgaagcacaagaattgcttgaacccgggaggcagaggttgcaatgagctgagatcgcaccac-acactccagcctgggcgacagagtgagac i manLeu1.NW_012101698v1 C 0 I 10 s colAng1.NW_012123265v1 491087 407 + 3907144 agtggctcatatctttaatcctagaactttgggaggccaagttaggaggatcaattaaggccaggagttccagatgagactgggaaacacagcaaaaccctatatctacaaaaagta-caaaaattatcagatgtgtctggacgtgttgggtcatacctgtaatcccagtactttgggaggctgaggcgggcagatcacttgagtcaaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaacacaaaaattagccaggcgtggtggcacatgcctgtagtctcagctacttgggggactgaagcacaagaattgtttgaacctgggaggcagaggttgcaatgagccgagatcgcaccac-acactccagcctgggtgacagagcaagac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503564 396 - 44557958 ---gtctcacatctttaaccttagaattttgggaggccaaagtaggaggatcaattaaggccaggagttcgagatgaaactgggaaacatggcaaaactctgtatgtac---------aaaaaattaccaaatgtgcccgg-ggtgttgggccatgcctgcaatcccagtattttgggaggctgaggcagttggatcacttgaggcccgcagttcgagaccaatctggccaacatggtgaaaccccatctctactgaaaatacaaaacttagccaggcgtggtggcacatgcttttagccccagctactcaggaggctgaggcacaagaatcacttgaacccaggagacggcggctgcagtgagccaagatcatgccactgcactccagcctaggtgacagagcaagac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6305743 400 + 6628207 Agtgtctcacatctttaaccttagaactttgggaggccaaagtagatggatcaattaaggccaggagttcaagatgaacctgggaaacatggtaaaactctgtatgtac---------aaaaaataaccagatatgcctggaggtgttgggtcatgcctgcaatcccagtactttgggaggctgaggcagttggatcacttgaggcctgcagtctgagaccagtctggccaacatggtgaaaccccatctctaatgaaaatacaaaacttagccaggcatagtggcatatgcctgtagtcccagctactcaggaggctgaggcacatgaatcacttgaacccaggagacggcggctgcagtgagccaagatcatgccactgcactccagcctgggtgacagagcaagac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3290691 400 - 5917169 Agtgtctcacatctttaaacttagaactttgggaggccaaagtaggaggatcagttaaggccaggagttcaagatgaacctgggaaacatggcaaaactctgtatgtac---------aaaaaattaccagatgtgcctgggggtgttgggtcatgcctgcaatcccagtactctgggaggctgaggcagttggatcacttgaggcctgcagttcgagaccagtctggccaacatggtgaaaccccatctctaatgaaaatataaaacttagccaggcatggtggcacatgcctgtagtcccagctgctcaggaggctgaggcacaagaatcacttgagcccaggagacggcagctgcagtgagccaagatcatgccactgcactccagcctgggtgacagagcaagac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9254588 409 - 10531588 Agtgtctcacatctttaaccttagaactttgggaggccaaagtaggaggatcaattaaggccaggatttcaagatgaacctgggaaacatggcaaaactctgtatatacaaaaaatataaaaaattaccagatgtgcccgggggtgttgggtcatgcctgcaatcccagtattttgggaggctgaggcagttggatcacttgaggcccgcagtttgagaccagtctggccaacatggtgaaaccccatctctactgaaaatacaaaacttagccaggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaggcacaagaatcacttgaacccaggagacggtggctgcagtgcgccaagatgatgccactgcactccagcctgggtgacagagcaagac i aotNan1.NW_018500622v1 I 861 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e macNem1.NW_012011355v1 14440305 44 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=356476.000000 s hg38.chr16_GL383557v1_alt 22089 130 + 89672 gtcgtct--caaaaaaataaaaaataaaaaaaaaattactgaatgtggtagtgtgtgtctgtaatcccagctactcaggaggctgaggtgggaggatcacctgagcctgggagatggaggctgcagtaagat s panTro5.chr16 21448089 130 - 81586097 gtcgtct--caaaaaaataaaaaataaaaaaaaaattactgaacgtggtagtgtgtgtctgtaatcccagctactcaggaggctgaggtgggaggatcacctgagcctgggagatggaggctgcagtaagat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21514888 131 - 90481686 gtcgtactacaaaaaaataaaaaat-aaaaaaaaattactgaatgtggtagtgtgtgtctgtaatcccagctactcaggaggctgaggtgggaggatcacctgagcctgggagatggaggctgcagtaagat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747817 123 + 3010529 gtcgtct--caaaaaaaaa-------aaaaaaaaattactgaatgtggtagtgtgtgtctgtaatcccagctactcaggaggctgaggtgggaggatcacctgagcctgggagatggaggctgcagtaagat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860598 120 + 163208435 gtcatct--caaaaaa----------aaaaaaaaagtatcggatgtggtagtgtgcgtctgtagtcccagctactcaggaggctgaggtgggaggatcacctgagcctgggagatggaggctgcagtaagac i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 491494 118 + 3907144 gtcgtct--caaaa------------aaaataataataacgaatgtggtggtgtgcgtctgtagtcccagctactcaggagactgaggtgggaggatcacctgagcctgggagatggaggctgcagtaagct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21503960 93 - 44557958 tgtctc------aaaa----------aaaaaaaaattaccagatatggtagtatgcacctatagtcccagctattcatg-----------------------gagtctgggaaatagagactgcagtaagct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306143 120 + 6628207 tctgtct--taaaaaa----------aaaaaaaaattaccagatatggtagtatatgtctgcagtcccagctactcaggaggctaaggtgggaggatcacctgagtctgggagagagagactgcagtaagct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3291091 119 - 5917169 tctgtct--cc-aaaa----------aaaaaaaaattaccagatatggtagtatgtgtctatagtcccagctactcaggaggctaaggtgggagggtcacctgagtctgggagatagagactgcagtaagct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9254997 120 - 10531588 tctgtct--cgaaaaa----------aaaaaaaaattaccagatatggtagtatgtgtctgtagtcccagctactcaggaggctaaggtgggaggatcacctgagtctgggagatagaaactgcagtaagct i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e macNem1.NW_012011355v1 14440305 44 + 26466322 I e rheMac8.chr20 21334273 10 - 74971481 I e macFas5.chr20 21043574 2 - 78541002 I e manLeu1.NW_012101698v1 6749729 10 - 7209941 I e chlSab2.chr5 58200877 10 + 75399963 I e cerAty1.NW_011999143v1 20764264 10 + 43916225 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=24510.000000 s hg38.chr16_GL383557v1_alt 22219 8 + 89672 atgatcat s panTro5.chr16 21448219 8 - 81586097 atgatcat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515019 8 - 90481686 atgatcat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747940 8 + 3010529 atgatcat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860718 8 + 163208435 atgatcat i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21043576 8 - 78541002 Atgctcaa i macFas5.chr20 I 2 C 0 s colAng1.NW_012123265v1 491612 8 + 3907144 atgatcaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504053 8 - 44557958 gcaatcac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306263 8 + 6628207 gtaatcac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3291210 8 - 5917169 gtaatcac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255117 8 - 10531588 gtaatcac i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e macNem1.NW_012011355v1 14440305 44 + 26466322 I e rheMac8.chr20 21334273 10 - 74971481 I e manLeu1.NW_012101698v1 6749729 10 - 7209941 I e chlSab2.chr5 58200877 10 + 75399963 I e cerAty1.NW_011999143v1 20764264 10 + 43916225 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=397397.000000 s hg38.chr16_GL383557v1_alt 22227 51 + 89672 gccactgcattccagcctgggtaacagagtgaaaccctatctcaaaaaaga s panTro5.chr16 21448227 51 - 81586097 gccactgcattccagcctgggtaacagagtgaaaccctatctcaaaaaaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515027 50 - 90481686 gccactgcattccagcctgggtaacagagtgaaaccctatctcaaaaaag- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747948 51 + 3010529 gccactgcattccagcctgggtaacagagtgaaaccctatctcaataaaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860726 50 + 163208435 gccactgcattccagcctctgtaacagagtgaaaccctgtctcaaaaaag- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334283 48 - 74971481 gccactgcattccagcctgggtaac--agcgaaaccctggctcaaaaaag- i rheMac8.chr20 I 10 C 0 s macFas5.chr20 21043584 48 - 78541002 gccactgcattccagcctgggtaac--agcgaaaccctggctcaaaaaag- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440349 48 + 26466322 gccactgcattccagcctgggtaac--agcgaaaccctggctcaaaaaag- i macNem1.NW_012011355v1 I 44 C 0 s cerAty1.NW_011999143v1 20764274 48 + 43916225 gccactgcattccagcctgggtaac--agcgaaaccctagctcaaaaaag- i cerAty1.NW_011999143v1 I 10 C 0 s chlSab2.chr5 58200887 49 + 75399963 gccactgcattccagcctgggtaac--agtgaaaccctgtctcaaaaaaga i chlSab2.chr5 I 10 C 0 s manLeu1.NW_012101698v1 6749739 48 - 7209941 gccactgcatgccagcctgggtaac--agcgaaaccctggctcaaaaaag- i manLeu1.NW_012101698v1 I 10 C 0 s colAng1.NW_012123265v1 491620 48 + 3907144 gccactgcattccaacctgggtaac--agtgaaaccctgtctcaaaaaag- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504061 46 - 44557958 gccactgtattctagcctacgtaatagagtgagaccctgtc----aaaaa- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306271 50 + 6628207 gccactgtattctagcctaggtaacagagtgagactgtctcaaaaaaaaa- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3291218 50 - 5917169 accactgcattctagcctaggtaaaagagtgagaccctgtctcaaaaaaa- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255125 50 - 10531588 accactgtattctagcctagataacagagtgagaccctgtctcaaaaaaa- i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80435030 410 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=49119.000000 s hg38.chr16_GL383557v1_alt 22278 5 + 89672 aaaaa s panTro5.chr16 21448278 5 - 81586097 aaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515077 4 - 90481686 -aaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 747999 5 + 3010529 aaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860776 5 + 163208435 aaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334331 5 - 74971481 aaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043632 5 - 78541002 aaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440397 5 + 26466322 aaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764322 5 + 43916225 aaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200936 5 + 75399963 aaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749787 5 - 7209941 aaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491668 5 + 3907144 aaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504107 5 - 44557958 aacaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306321 5 + 6628207 aaaaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3291268 5 - 5917169 aaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255175 5 - 10531588 aaaaa i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80435440 3 + 88915250 --aat i canFam3.chr5 I 410 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e dasNov3.JH569970 900497 0 + 1009443 C e otoGar3.GL873566 13673911 813 + 13852661 T a score=41123.000000 s hg38.chr16_GL383557v1_alt 22283 4 + 89672 aaaa s panTro5.chr16 21448283 4 - 81586097 aaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515081 4 - 90481686 aaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748004 4 + 3010529 aaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860781 4 + 163208435 aaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334336 4 - 74971481 aaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043637 4 - 78541002 aaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440402 4 + 26466322 aaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764327 4 + 43916225 aaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200941 4 + 75399963 aaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749792 4 - 7209941 aaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491673 4 + 3907144 aaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504112 4 - 44557958 aaTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306326 4 + 6628207 aaaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3291273 4 - 5917169 aaaa i cebCap1.NW_016107433v1 C 0 I 1676 s aotNan1.NW_018500622v1 9255180 3 - 10531588 aaa- i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80435443 4 + 88915250 aaaa i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 900497 4 + 1009443 AGAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=784142.000000 s hg38.chr16_GL383557v1_alt 22287 76 + 89672 aTTCT--AACAGTTCATAAAGTTCACAGCCTACATTTAGTATGAATAGTAACTACCATACTATTTTCCATTATAAACT s panTro5.chr16 21448287 76 - 81586097 aTTCT--AACAGTTCATAAAGTTCACAGCCTACATTTAGTATGAATAGTAACTACCATACTATTTTCCATTATAAACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515085 76 - 90481686 aTTCT--AACAGTTCATAAAGTTCACAGCCTACATTTAGTATGAATAGTAACTACCATACTATTTTCCATTATAAACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748008 76 + 3010529 aTTCT--AACAGTTCATAAAGTTCACAGCCTACATTTAGTATGAATAGTAACTACCATACTATTTTCCATTATAAACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860785 70 + 163208435 aTTCT--AACAGTTCATAAAGTTCACAGCCTACATTTAG------TAGTAACTACCATACTATTTTCTATTATAAACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334340 76 - 74971481 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043641 76 - 78541002 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440406 76 + 26466322 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764331 76 + 43916225 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58200945 76 + 75399963 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749796 76 - 7209941 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491677 76 + 3907144 aTTCT--AACAGTTCATAAAGTTCACAGCTTACATTTAGTATGAATAGTAACTACCATACTGTTTTCCATTATAAACT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504116 76 - 44557958 ATTCT--AACAGTGCATGAAATTCACAGCCTACATTTAGTATGAATAGTACCTATCATACTACCTTCCATCATAAACT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306330 76 + 6628207 aTTCT--AACAGTGCATGAAATTCACAGCCTACATTTAGTATGAATAGTACCTATCATACTACCTTCCATTATAAACT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9255183 76 - 10531588 aTTCT--AACAGTGCATGAAATTCACAGCCTACATTTAGTATGAATAGTACCTATCATACTACCTTCCATTATAAACT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80435449 76 + 88915250 atttttaaaaaGTGCATATAATTCATGACCTGCTTTTGGTATGAATAGTAAACATCATATTACCTT--GTTATAAGCT i canFam3.chr5 I 2 I 396 s dasNov3.JH569970 900501 75 + 1009443 TTTCC--AACAGCACATAAAG-TCATCACTTATATTTGGTATGTATAGTAACAATCATACTACCTTCCATTATAAGCT i dasNov3.JH569970 C 0 I 10 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e cebCap1.NW_016107433v1 3291277 1676 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=16578.000000 s hg38.chr16_GL383557v1_alt 22363 2 + 89672 AA s panTro5.chr16 21448363 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515161 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748084 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860855 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334416 2 - 74971481 AG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043717 2 - 78541002 AG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440482 2 + 26466322 AG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764407 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201021 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749872 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491753 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504192 2 - 44557958 AG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306406 2 + 6628207 AG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9255259 2 - 10531588 AG i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 900586 2 + 1009443 AG i dasNov3.JH569970 I 10 C 0 e canFam3.chr5 80435525 396 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e proCoq1.NW_012152729v1 2918740 258 + 9850184 I e cebCap1.NW_016107433v1 3291277 1676 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=60391.000000 s hg38.chr16_GL383557v1_alt 22365 6 + 89672 GAATGT-- s panTro5.chr16 21448365 6 - 81586097 GAATGT-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515163 6 - 90481686 GAATGT-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748086 6 + 3010529 GAATGT-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860857 6 + 163208435 GAATGT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334418 6 - 74971481 GAATGT-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043719 6 - 78541002 GAATGT-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440484 6 + 26466322 GAATGT-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764409 6 + 43916225 GAATGT-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201023 6 + 75399963 GAATGT-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749874 6 - 7209941 GAATGT-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491755 6 + 3907144 GAATGT-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504194 6 - 44557958 AAATGT-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306408 6 + 6628207 AAATGT-- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9255261 6 - 10531588 AAATGT-- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2918998 6 + 9850184 GAATGT-- i proCoq1.NW_012152729v1 I 258 C 0 s dasNov3.JH569970 900588 8 + 1009443 GAATTTGT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80435525 396 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446359 591 - 129401213 I e cebCap1.NW_016107433v1 3291277 1676 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=118425.000000 s hg38.chr16_GL383557v1_alt 22371 10 + 89672 ATGTTTGTTC s panTro5.chr16 21448371 10 - 81586097 ATGTTTGTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515169 10 - 90481686 ATGTTTGTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748092 10 + 3010529 ATGTTTGTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860863 10 + 163208435 ATGTTTGTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334424 10 - 74971481 ATGTTTGTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043725 10 - 78541002 ATGTTTGTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440490 10 + 26466322 ATGTTTGTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764415 10 + 43916225 ATGTTTGTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201029 10 + 75399963 ATGTTTGTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749880 10 - 7209941 ATGTTTGTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491761 10 + 3907144 ATGTTTGTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504200 10 - 44557958 ATGTTTGTCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306414 10 + 6628207 ATGTTTGTTC i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9255267 10 - 10531588 ATGTTTGTTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2919004 10 + 9850184 GTGTTTATTC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22446950 10 - 129401213 ATGTGTGTTC i mm10.chr8 I 591 C 0 s dasNov3.JH569970 900596 7 + 1009443 ATGCTTG--- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80435525 396 + 88915250 I e micMur3.chr20 54907406 476 + 72247402 I e cebCap1.NW_016107433v1 3291277 1676 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=517563.000000 s hg38.chr16_GL383557v1_alt 22381 43 + 89672 AAAGTAATGCCTACTAACTAGGGACATGTGAGGAGTTACTCCT s panTro5.chr16 21448381 43 - 81586097 AAAGTAATGCCTACTAACTAGGGACATGTGAGGAGTTACTCCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515179 43 - 90481686 AAAGTAATGCCTACTAACTAGGGACATGTGAGGAGTTACTCCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748102 43 + 3010529 AAAGTAATGCCTACTAACTAGGGACATGTGAGGAGTTACTCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860873 43 + 163208435 AAAGTAATGCCTACTAACTAGGGACATATGAGGAGTTACTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334434 43 - 74971481 AAAGTAATGCCTACAAACCAGGGACATGTGAGGAGTTACTCCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043735 43 - 78541002 AAAGTAATGCCTACAAACCAGGGACATGTGAGGAGTTACTCCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440500 43 + 26466322 AAAGTAATGCCTACAAACCAGGGACATGTGAGGAGTTACTCCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764425 43 + 43916225 AAAGCAATGCCTACAAACCAGGGACATGTGAGGAGTTACTCCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201039 43 + 75399963 AAAGTAATGCCTACAAACCAGGGACATGTGAGGAGTTACTCCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749890 43 - 7209941 AAAGTAATGCCTACAAACCAGGGACATGTGAGGAGTTACTCCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491771 43 + 3907144 AAAGTAATGCCTACTAACCAGGGACATGTGAGGAGTTACTCCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504210 43 - 44557958 AAAGTAATGCCCACTACCTAGGGAGATTTAAGGAGTTACTCCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6306424 43 + 6628207 AAAGTAATGCCCACTATCTAGGGAGATGTAAGAAGTTACTCCC i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9255277 43 - 10531588 AAGGTAATGCCCACTATCTAGGGAGATGTAAGGAGTTATTCCC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2919014 42 + 9850184 AAAATAAGGCTTACTAACTAGGGAGATGTGAGAAGTTATTCC- i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22446960 35 - 129401213 AA---AATGCTT-----CTGAAAGGATGCGAGAAGCTACTCCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80435921 43 + 88915250 agaaTAATGCTTACTAACTGGGGAGATGTGAGGAGTTACTCCT i canFam3.chr5 I 396 I 208 s dasNov3.JH569970 900603 43 + 1009443 AAAATAGTGCCTACTAACTGGGGAGATCTGAGAAGTTACTCCT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e cebCap1.NW_016107433v1 3291277 1676 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=58592.000000 s hg38.chr16_GL383557v1_alt 22424 5 + 89672 TGTTT s panTro5.chr16 21448424 5 - 81586097 TGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515222 5 - 90481686 TGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748145 5 + 3010529 TGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860916 5 + 163208435 TGCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334477 5 - 74971481 TGCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043778 5 - 78541002 TGCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440543 5 + 26466322 TGCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764468 5 + 43916225 TGCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201082 5 + 75399963 TGCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749933 5 - 7209941 TGCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491814 5 + 3907144 TGCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504253 5 - 44557958 TGCtt i calJac3.chr20 C 0 I 314 s saiBol1.JH378225 6306467 5 + 6628207 TGCTT i saiBol1.JH378225 C 0 I 661 s aotNan1.NW_018500622v1 9255320 5 - 10531588 TGCtt i aotNan1.NW_018500622v1 C 0 I 301 s proCoq1.NW_012152729v1 2919056 5 + 9850184 TGTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80436172 5 + 88915250 TGGTT i canFam3.chr5 I 208 C 0 s dasNov3.JH569970 900646 4 + 1009443 -GCTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e mm10.chr8 22446995 0 - 129401213 C e cebCap1.NW_016107433v1 3291277 1676 - 5917169 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1863603.000000 s hg38.chr16_GL383557v1_alt 22429 153 + 89672 TCTTTATAAGCCTTAAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAGAACAGAGGAGACAGGGCCAGAAACTCTAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAGT---CACGGTTAAATGTG s panTro5.chr16 21448429 153 - 81586097 TCTTTATAAGCCTTAAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAGAACAGAGGAGACAGGGCCAGAAACTCTAACCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAGT---CACGGTTAAATGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515227 153 - 90481686 TCTTTATAAGCCTTAAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAGAACAGAGGAGACAGGGCCAGAAACTCTAACCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAGT---CACGGTTAAATGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748150 153 + 3010529 TCTTTATAAGCCTTAAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAGAACAGAGGAGACAGGGCCAGAAACTCTAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAGT---CACGGTTAAATGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53860921 153 + 163208435 TCTTTATAAGCCTTAAGACGCAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAGAACAGAGGAGACAGGGCCAGAGACTCCAGCCCCTTC-ACTAAACAGTAAGTGACTG-CACAGAAGTTTGCCTCAGT---CATGGTTAAATGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334482 153 - 74971481 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043783 153 - 78541002 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAGGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440548 153 + 26466322 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764473 153 + 43916225 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201087 153 + 75399963 TCTTTATAAGCCGTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACAGTAAGTGATTG-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6749938 153 - 7209941 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACAGTAAGTGACTT-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491819 153 + 3907144 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATGAACAATGAGAAAGCCTCCAAGTC--AGAAAACAGAGGAGACAGTGCCAGAGACTCCAGCCCCTTC-ATTAAACACTAAGTGACTG-CAAAGAAGTTTGCCTCAAT---CATGGTTAAATTTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504572 153 - 44557958 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATAAACACTGAGAAAGCCTCCAACTC--AGAGAACAGAGGAGACAGGGCCAGAGACTCTAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAGGACATTTGCCTCAGT---CATGGTTAAATTTG i calJac3.chr20 I 314 C 0 s saiBol1.JH378225 6307133 151 + 6628207 TCTTTATAAGCCTTGACATGAAAGTTAGGAAGCACATAAACACGGAGAAAGCCACCAACTC--AGAGAACAGAGGAGACAGGGCCAGAGA--CTAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAGGACATTTGCCTCAGT---CATGGTTAAATTTG i saiBol1.JH378225 I 661 C 0 s cebCap1.NW_016107433v1 3292953 150 - 5917169 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATAAACACGGAGAAAGCCTCTAACTC--GGGGAACAGAGGAGAC-GGGCCAGAGA--CTAGCCCCTTC-ATTAAACAGTAAGTGACTA-CAAGGACATTTGCCTCAGT---CATGGTTAAATTTG i cebCap1.NW_016107433v1 I 1676 C 0 s aotNan1.NW_018500622v1 9255626 150 - 10531588 TCTTTATAAGCCTTGAGATGAAAGTTAGGAAGCACATAAACACTGAGAAAGCCTCCAACTC--AGAGAACAGAGGAGACAGGGCCAGAGA--CTAGCCCCTTC-ATTAAACAGTAAGTGACTG-CAAGGACATTTGCCTCAGT---CATGGTTAAA-TTG i aotNan1.NW_018500622v1 I 301 C 0 s proCoq1.NW_012152729v1 2919061 150 + 9850184 ---TTAAAAGCCTTGAGATGAAAGCTGGGAAGGATAGGAACAATGAG--AGCCTCTTAGCCCAAGAGAACAGAGGAGACAGAGCCAGAGACTACAGCCCCTTA-ATTAAATAATAAGTGACCG-CGAAGAAGTTTGCCTAAGT---CCTAGTTAAATTTG i proCoq1.NW_012152729v1 C 0 I 10 s mm10.chr8 22446995 132 - 129401213 ---------GCTTTGATGTGGAAGTTGGTAAG-ACA-----AATGAGAAAATCTCCTTATG--AGAAAGAACA-GAGAAAGGGCTA-AAATTTCAGCCCTTCAGACTTAAC--------ACTA-CAAAGGAACCTGCCACGACATGCATGCTTCAGTCTG i mm10.chr8 C 0 I 14 s canFam3.chr5 80436177 144 + 88915250 TCTTCATTAGCCTTGAC-TGAAAACTGGGAGG-ACAAGAACAGTGATAAAGGCTCCTAGCC--AAAGAACAG-GGAGACAGGGCCAGAGGCTGCATCCCCTTG-ATTATATAATATGTGGATGCCAAAAAAGTTTA----------CCTGGTTAAATGTG i canFam3.chr5 C 0 I 10 s dasNov3.JH569970 900650 135 + 1009443 CCTTTATAACCCC-----TGAAAGTTGGGAAGAACGCAAACAAT---AAATTCTCCTAGCCAAAGAAAACAGAGGACACAGGGCCAGAGGCTGTAATCGTTTA-TTCAAAC-----------G-TGAAGAAGTTTGCCAAGAT---CATG-TTAAATTTG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907406 476 + 72247402 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=896695.000000 s hg38.chr16_GL383557v1_alt 22582 59 + 89672 ----------AAGGGATAACTGAAAGGCTGGGGACAAAAAGGTACAGCTAAACATCACAGACACTCAGG s panTro5.chr16 21448582 59 - 81586097 ----------AAGGGATGACTGAAAGGCTGGGGACAAAAAGGTACAGCTAAACATCACAGACACTCAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515380 59 - 90481686 ----------AAGGGATGACTGAAAGGCTGGGGACAAAAAGGTACAGCTAAACATCACAGACACTCAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748303 59 + 3010529 ----------AAGGGATAACTGAAAGGCTGGGGACAAAAAGGTACAGCTAAACATCACAGACACTCAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861074 59 + 163208435 ----------AAGGGATAACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334635 59 - 74971481 ----------AAGGGATCACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043936 59 - 78541002 ----------AAGGGATCACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440701 59 + 26466322 ----------AAGGGATCACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764626 59 + 43916225 ----------AAGGGATCACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201240 59 + 75399963 ----------AAGGGATAACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750091 59 - 7209941 ----------AAGGGATCACTGAAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 491972 59 + 3907144 ----------AAGGGATAACTGAAAGGCTGGGGACAAAAAGGTATTGCTAAACATCACAGACACTCAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504725 59 - 44557958 ----------AAGGGATAATTGGAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307284 59 + 6628207 ----------AAGGGATAACTGGAAGGGTGGGGACAAAAAGGTATAACTAAACATAACAGACACTCAGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293103 59 - 5917169 ----------AAGGGATAACTGGAAGGCTGGGGACAAAAAGGTATAGCTAAACATCACAGACACTCAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255776 59 - 10531588 ----------AAGGGATAACTGGAAGGCTGGGGACAAAAAAGTATAGCTAAACATCACAGACACTCAGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54907882 59 + 72247402 ----------AAGGGATAATAGAAAAGCTGGGGACAAAAAGGTGTAGGTAAACATCATAGGTACTCAGG i micMur3.chr20 I 476 I 57 s proCoq1.NW_012152729v1 2919221 58 + 9850184 ----------AAGGGATAATAGGAAAGCTGGGGACAAAAA-GTGTAGGTAAACATCATAGGTACTCAGG i proCoq1.NW_012152729v1 I 10 C 0 s mm10.chr8 22447141 59 - 129401213 ----------CAGGGATGGCAGTAGGAGTGGGGACAAAAAGGCACACTGAAATATTATCAATATCCAGG i mm10.chr8 I 14 C 0 s canFam3.chr5 80436331 59 + 88915250 ----------GAGGGATCACAGAAAGGCTGGGAACAATACAATGTAGCTAAACATTAAAGAGACTCAGG i canFam3.chr5 I 10 C 0 s dasNov3.JH569970 900785 68 + 1009443 ATACTCTGGTATAGGATCACATAAAGGCTGGGG-CAAAAAGCTCATGTTAAATATCACAGACGTTTATA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13673911 813 + 13852661 T a score=630878.000000 s hg38.chr16_GL383557v1_alt 22641 67 + 89672 TAATGGCTGAAATTATAGGTGCAGATGAGCTAAACATCAGGTGTAAACAAGGAGAATGAGTCAGGGC s panTro5.chr16 21448641 67 - 81586097 TAATAGCTGAAATTATAGGTGCAGATGAGCTAAACATCAGGTGTAAACAAGGAGAATGAGTCAGGGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515439 67 - 90481686 TAATAGCTGAAATTATAGGTGCAGATGAGCTAAACATCAGGTGTAAACAAGGAGAATGAGTCAGGGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748362 67 + 3010529 TAATAGCTGAAATTATAGGTGCAGATGACCTAAACATCAGGTGTAAACAAGGAGAATGAGTCAGGGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861133 67 + 163208435 TAATAGCTGAAATTAGAGGTGCAGATGACCTAAACATCAGGTGTAAACAAGAAGAATGAGTCAGGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334694 61 - 74971481 TAATACCTGAAATGAT------ACACGACCTAAACATCAGGTGTAAACAAGGGAAAAGAGTCACAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21043995 61 - 78541002 TAATACCTGAAATGAT------ACACGACCTAAACATCAGGTGTAAACAAGGGAAAAGAGTCACAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440760 61 + 26466322 TAATACCTGAAATGAT------ACACGACCTAAACATCAGGTGTAAACAAGGGAAAAGAGTCACAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764685 61 + 43916225 TAATACCTGAAATGAT------ACACGACCTAAACATCAGGTGTAAACAAGGGGAAAGAGTCACAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201299 61 + 75399963 TAATAGCTGAAATGAT------ACACGACCTAAACATCAGGTGTAAACAAGGGGAAAGAGTCACGGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750150 61 - 7209941 TAATATCTGAAATGAT------ACACGACCTAAACATCAGGTGTAAACAAGGGGAAAGAGTCACAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492031 57 + 3907144 TAATAGCTGAAATGAT------ACATGACCTAAACATCAGGTGTAAACAAGGG----GAGTCAGGGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504784 67 - 44557958 TAATAGCTGAAATTATAGGTGCAGATAACCTAAACATCAGGTGTAAACAAGGGAAATGAGTCAGGGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307343 67 + 6628207 TAATAGCTGAAATTATAGGTGCAGATAACCTAAACATCAGGTGTAAACAAAGGGAATGAGTCAGGGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293162 67 - 5917169 TAATAGCTGAAATTATAGGTGCAGATAACCTAAACATTAGGTGTAAACAAGGGGAATGAGTCAGGGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255835 67 - 10531588 TAATAGCTGAAATTATAGGTGCAGATAACCTAAACATCAGGTGTAAACAAGGGGAATGAGTCAGGGC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2919279 58 + 9850184 TAATAGCTGAAATTATAGGAACAGATGACCTAAACATAGG---------AGGGGGATGAATCAGGGC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447200 47 - 129401213 TAAATGCTGAGGCTACAGGGA-ACAGGACTTGAGTTT-------------------TGAATCATGGG i mm10.chr8 C 0 C 0 s canFam3.chr5 80436390 66 + 88915250 TAATAGCTGAAATTATAGGAGCAGATGACCTAAACATTGGGTGTACAAAAAAGAGACGAATCAAGG- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 900853 35 + 1009443 --------------------------------TTTATAGGGTATATATGAGGGAAGTGAATAAGGAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54907941 57 + 72247402 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1257876.000000 s hg38.chr16_GL383557v1_alt 22708 95 + 89672 CCTATCAGCTTGTGTTGCTTCACTGGTCTGCTCCTAAACTAAGCAGCATTCGTTTCTCCAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT s panTro5.chr16 21448708 95 - 81586097 CCTATCAGCTTGTGTTGCTTCACTGGTCTGCTCCTAAACTAAGCAGCATTCGTTTCTCCAGACATGCAGACTGAT-ATCCTGAAGCAACTTTCCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515506 95 - 90481686 CCTATCAGCTTGTGTTGCTTCACTGGTCTGCTCCTAAACTAAGCAGCATTCGTTTCTCCAGACATGCAGACTGAT-ATCCTGAAGCAACTTTCCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748429 95 + 3010529 CCTATCAGCTTGTGTTGCTTCACTGGTCTGCTCCTAAACTAAGCAGCATTCGTTTCTCCAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861200 95 + 163208435 CCTATCAGCTTGTGTTGCTTCACCGGTCTGCTCCTAAACTAAGCAGCATCCGTTTCTCCAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334755 95 - 74971481 CCTATCCGCTTGTGTTGCTTCACTGGACTGCTTCTAAACTAAGCAGCATTAGTTTCTCTAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044056 95 - 78541002 CCTATCCGCTTGTGTTGCTTCACTGGACTGCTTCTAAACTAAGCAGCATTAGTTTCTCTAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440821 95 + 26466322 CCTATCCGCTTGTGTTGCTTCACTGGACTGCTTCTAAACTAAGCAGCATTAGTTTCTCTAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764746 95 + 43916225 CCTATCCGCTTGTGTTGCTTCACT-GACTGCTTCTAAACTAAGCAGCATTAGTTTCTCTAGACATGCAGACTGATAATCCTGAAGCAATTTTCCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201360 95 + 75399963 CCTATCCGCTTGTGTTGCTTCACTGGACTGCTTCTAAACTAAGCAGCATTCGTTTCTCTAGACATGCAGACTGAA-ATCCTGAAGCAATTTTCCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750211 95 - 7209941 CCTATCCGCTTGTGTTGCTTCACTGGACTGCTTCTAAACTAAGCAGCATTAGTTTCTCTAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492088 95 + 3907144 CCTATCCGCTTGTGTTGCTTCACTGGACTGCTTCTAAACTAAGCAGCATTCATTTCTCCAGACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504851 94 - 44557958 TCTACCAGCTTGTGTTGGTTCACTAGTGTGCTCCTAAACTAGGTAGCATTGCTTTCTC-AAACATATAGACTGAT-ATTCTGAAGCAATTTTCCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307410 94 + 6628207 TCTACCAGCTTGTGTTGATTCACTGGTGTGCTCCTAAACTAAGTAGCATTCCTTTCTC-AAACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293229 86 - 5917169 TCCACCAGCTTGTG--------CTGGTGTGCTCCTAAACTAAGTAGCATTCCTTTCTC-AAACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255902 94 - 10531588 TCTACCAGCTTGTGTTGATTCACTGGTGTGCTCCTAAACTAAGTAGCATTCCTTTCTC-AAACATGCAGACTGAT-ATCCTGAAGCAATTTTCCAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54907998 95 + 72247402 CCTATCAGCTTGTGCTGCTGTACTGGCCTGCTCCTAAACGAGCTAGCACCAGTTTCTGCAGACAGACAGACTGAC-ATCACGAAGCAATTTTCCAT i micMur3.chr20 I 57 C 0 s proCoq1.NW_012152729v1 2919337 91 + 9850184 CCTATCCGCTTATGCTGCTGCACTGGCCTGCTCCTAAACGAGCTAGCACCGGTTTCT----CCACACAGACCGAT-AGCCCGAAGCAATTTTCCAT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447247 89 - 129401213 CCTATCAGCCTGTGCCATTGCATAGACATGTTCCTAAATCAGCTAACATCAGCTTCTCCAG------AGGCAGAC-ATTCTAAAGCCACGCTCCAT i mm10.chr8 C 0 C 0 s canFam3.chr5 80436456 95 + 88915250 TCTATCAGCTCCTGTTTCTCCATTGACCTGCTACTAAACTGGCTAGCACCAGTTTCTCCAGACAGGCAGAAAGGG-ATTCTGAAACAATTTTCCAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 900888 73 + 1009443 CTTATCAGCTACTGCTGCT-CATTGACCT---------------------AGTTTCTCCAGATAGGCAGACTGAA-ATCCTGAAGCAATTTTCCAT i dasNov3.JH569970 C 0 I 1194 e otoGar3.GL873566 13673911 813 + 13852661 T a score=503342.000000 s hg38.chr16_GL383557v1_alt 22803 40 + 89672 CCAGGTATGAA----GCACAGAAGAAGAGGACAATTAACAA-TTT s panTro5.chr16 21448803 40 - 81586097 CCAGGTATGAA----GCACAGAAGAAGAGGAGAATTAACAA-TTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515601 40 - 90481686 CCAGGTATGAA----GCACAGAAGAAGAGGAGAATTAACAA-TTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748524 40 + 3010529 CCAGGTATGAA----GCACAGAAGAAGAGGAGAATTAACAA-TTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861295 37 + 163208435 CCAGGTATGAA----GCATGGAAGAAGAG---AATTATCAA-TTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334850 40 - 74971481 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAACAA-TTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044151 40 - 78541002 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAACAA-TTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440916 40 + 26466322 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAACAA-TTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764841 40 + 43916225 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAACAA-TTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201455 40 + 75399963 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAACAA-TTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750306 40 - 7209941 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAACAA-TTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492183 40 + 3907144 CCAGGTATGAA----GCATGGAAGAAGAAGAGAATTAATAA-TTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504945 41 - 44557958 CCAGGTATGAAGCATGCATGGAAGAAGAG---AATTAACAA-TTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307504 38 + 6628207 CCAGGTATGAA----GCATGGAAGAAGAG---AATTAACAATTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293315 37 - 5917169 CCAGGTATGAA----GCATGGAAGAAGAG---AATTAACAA-TTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9255996 37 - 10531588 CCAGGTATGAA----GCATGGAAGAAGAA---AATTAACAA-TTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54908093 40 + 72247402 CCAGGTATGAA----GCATAGAAGCAAAAGAGAATTAACAA-TTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2919428 40 + 9850184 CCAGGTATGAA----GTATAGAAGGAAAAGAGAATTAACAA-TTT i proCoq1.NW_012152729v1 C 0 I 1071 s mm10.chr8 22447336 40 - 129401213 CTGGGAATGAA----GTGTAAAGGAGGAAGAGGGTTTGTAT-TTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80436551 40 + 88915250 CTAGATATGAA----GTATACAAAGGATGTGAGATTAACtt-ttt i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 900961 1194 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=15561.000000 s hg38.chr16_GL383557v1_alt 22843 1 + 89672 T s panTro5.chr16 21448843 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515641 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748564 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861332 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334890 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044191 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440956 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764881 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201495 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750346 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492223 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504986 1 - 44557958 T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307542 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293352 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256033 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54908133 1 + 72247402 T i micMur3.chr20 C 0 I 1166 s mm10.chr8 22447376 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr5 80436591 1 + 88915250 t i canFam3.chr5 C 0 I 1450 e proCoq1.NW_012152729v1 2919468 1071 + 9850184 I e dasNov3.JH569970 900961 1194 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=39809.000000 s hg38.chr16_GL383557v1_alt 22844 5 + 89672 AGAGG s panTro5.chr16 21448844 5 - 81586097 AGAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515642 5 - 90481686 AGAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748565 5 + 3010529 AGAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861333 5 + 163208435 AGAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334891 5 - 74971481 AGAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044192 5 - 78541002 AGAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440957 5 + 26466322 AGAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764882 5 + 43916225 AGAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201496 5 + 75399963 AGAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750347 5 - 7209941 AGAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492224 5 + 3907144 AGAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504987 5 - 44557958 TGAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307543 5 + 6628207 TGAGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293353 5 - 5917169 TGAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256034 5 - 10531588 TGAGG i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22447377 3 - 129401213 --AAG i mm10.chr8 C 0 C 0 e canFam3.chr5 80436592 1450 + 88915250 I e micMur3.chr20 54908134 1166 + 72247402 I e proCoq1.NW_012152729v1 2919468 1071 + 9850184 I e dasNov3.JH569970 900961 1194 + 1009443 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=13073.000000 s hg38.chr16_GL383557v1_alt 22849 1 + 89672 C s panTro5.chr16 21448849 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515647 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748570 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861338 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334896 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044197 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440962 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764887 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201501 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750352 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492229 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504992 1 - 44557958 C i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307548 1 + 6628207 C i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293358 1 - 5917169 C i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256039 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22447380 1 - 129401213 T i mm10.chr8 C 0 C 0 s dasNov3.JH569970 902155 1 + 1009443 c i dasNov3.JH569970 I 1194 C 0 e canFam3.chr5 80436592 1450 + 88915250 I e micMur3.chr20 54908134 1166 + 72247402 I e proCoq1.NW_012152729v1 2919468 1071 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=207670.000000 s hg38.chr16_GL383557v1_alt 22850 34 + 89672 ACTCA-----------------------------------------------AAAAA--AATAAT-----AATAATACTATT-----GAATTC s panTro5.chr16 21448850 34 - 81586097 ACTCA-----------------------------------------------AAAAA--AATAAT-----AATAATACTATT-----GAATTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515648 34 - 90481686 ACTCA-----------------------------------------------AAAAA--AATAAT-----AATAATACTATT-----GAATTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748571 34 + 3010529 ACTCA-----------------------------------------------AAAAA--AAAAAT-----AATAATACTATT-----GAATTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861339 34 + 163208435 ACTCa-----------------------------------------------aaaat--aataat-----aataatactaTT-----GAATTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334897 34 - 74971481 ACTCA-----------------------------------------------AAAAA--AATAAT-----AATAATACTATT-----GAATTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044198 34 - 78541002 ACTCA-----------------------------------------------AAAAA--AATAAT-----AATAATACTATT-----GAATTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440963 34 + 26466322 ACTCA-----------------------------------------------AAAAA--AATAGT-----AATAATACTATT-----GAATTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764888 34 + 43916225 ACTCA-----------------------------------------------AAAAA--AATAAT-----AATAATACTATT-----GAATTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201502 36 + 75399963 ACtaa-----------------------------------------------aaaaaataataat-----aataatactaTT-----GAATTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750353 34 - 7209941 ACTCA-----------------------------------------------AAAAA--AAAAAT-----ACTAATATTATT-----GAATTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492230 32 + 3907144 ACTCA-----------------------------------------------AAAAA--AAAA-------AATAATACTATT-----GAATTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21504993 27 - 44557958 ACTCA-----------------------------------------------AAAAA--AG------------AATACTATT-----GAATTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307549 27 + 6628207 ACTCA-----------------------------------------------AAAAA--AG------------AATACTATT-----GAATTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293359 26 - 5917169 ACTC------------------------------------------------AAAAA--AG------------AATACTATT-----GAATTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256040 27 - 10531588 ATTCA-----------------------------------------------AAAAA--AG------------AATACTATT-----GAATTC i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22447381 91 - 129401213 ACCCACGTGGTAGGAATTGTATGAGTTTTGTCATCCTTAGCATGGCTTGGCTAATGA--ACTGATGCTTAAACAATGATATCACCCAGAACCC i mm10.chr8 C 0 C 0 s canFam3.chr5 80438042 27 + 88915250 ACTTA-----------------------------------------------AAAAA--CATGAA-----AAAAAAAA---------GAA--- i canFam3.chr5 I 1450 C 0 s dasNov3.JH569970 902156 24 + 1009443 acaca-----------------------------------------------cacaa--aaaaaT---------------TT-----GACTGC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54908134 1166 + 72247402 I e proCoq1.NW_012152729v1 2919468 1071 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=56179.000000 s hg38.chr16_GL383557v1_alt 22884 4 + 89672 TCAT s panTro5.chr16 21448884 4 - 81586097 TCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515682 4 - 90481686 TCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748605 4 + 3010529 TCAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861373 4 + 163208435 TCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334931 4 - 74971481 TCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044232 4 - 78541002 TCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14440997 4 + 26466322 TCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20764922 4 + 43916225 TCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201538 4 + 75399963 TCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750387 4 - 7209941 TCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492262 4 + 3907144 TCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505020 4 - 44557958 TCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307576 4 + 6628207 TCAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293385 4 - 5917169 TCAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256067 4 - 10531588 TCAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909300 4 + 72247402 TCAT i micMur3.chr20 I 1166 C 0 s mm10.chr8 22447472 4 - 129401213 GCGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80438069 3 + 88915250 -AAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902180 4 + 1009443 TCAT i dasNov3.JH569970 C 0 I 3 e proCoq1.NW_012152729v1 2919468 1071 + 9850184 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=267905.000000 s hg38.chr16_GL383557v1_alt 22888 18 + 89672 GTTTTAACCAAACTCAAA s panTro5.chr16 21448888 18 - 81586097 GTTTTAACCAAACTCAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515686 18 - 90481686 GTTTTAACCAAACTCAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748609 18 + 3010529 GTTTTAACCAAACTGAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861377 18 + 163208435 GTTTTAACCAAACTCAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334935 18 - 74971481 GTTTTAAACAAACTCAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044236 18 - 78541002 GTTTTAAACAAACTCAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14441001 18 + 26466322 GTTTTAAACAAACTCAAA i macNem1.NW_012011355v1 C 0 I 1439 s cerAty1.NW_011999143v1 20764926 18 + 43916225 GTTTTAAACAAACTCAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201542 18 + 75399963 GTTTTAAACAAACTCAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750391 18 - 7209941 GTTTTAAAGAAACTCAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492266 18 + 3907144 GTTTTAAACAAACTCAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505024 18 - 44557958 GTTGTAACCAAACTCAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307580 18 + 6628207 GTTTTAACCAAACTCAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293389 18 - 5917169 GTTTTAACCAAACTCAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256071 18 - 10531588 GTTTTAACCAAACTCAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909304 18 + 72247402 GTTTTAACCAAACTCAAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920539 18 + 9850184 gTTTTAACCAAACTCAAG i proCoq1.NW_012152729v1 I 1071 C 0 s mm10.chr8 22447476 17 - 129401213 -GCTTACTTGACCTCATG i mm10.chr8 C 0 I 10 s canFam3.chr5 80438072 18 + 88915250 GTTTTAATCAAACTCAAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902187 18 + 1009443 GTTTAAATCGAACTGAAG i dasNov3.JH569970 I 3 C 0 e otoGar3.GL873566 13673911 813 + 13852661 T a score=745696.000000 s hg38.chr16_GL383557v1_alt 22906 65 + 89672 ATTATTACCCTCCAA------------ATACGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA s panTro5.chr16 21448906 65 - 81586097 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515704 65 - 90481686 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748627 65 + 3010529 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTAAAACTCTTTTTTCTGACAATCTGAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861395 65 + 163208435 ATTATTACCCTCCCA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21334953 65 - 74971481 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044254 65 - 78541002 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20764944 65 + 43916225 ATTATTACACTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201560 65 + 75399963 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750409 65 - 7209941 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492284 65 + 3907144 ATTATTACCCTCCAA------------ATAAGAAATCTAAAATA------------------------------------------------------------------------------------------------ACTATTCAAACTCTTTTTTCTGACAATCTGAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505042 59 - 44557958 ATTATTACCCTCCAA------------ATAAGGAATCTAAAA----------------------------------------------------------------------------------------------------TATTCAAG--CTTTTTTCTGACAATCTGAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307598 59 + 6628207 ATTATTACCCTCCAA------------ATAAGAAATCTAAAA----------------------------------------------------------------------------------------------------TATTCTAA--CTTTTTTCTGACAATCTGAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293407 59 - 5917169 ATTATTACTCTCCAA------------ATAAGGAATCTAAAA----------------------------------------------------------------------------------------------------TATTCAAA--CTTTTTTCTGACAATCTGAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256089 59 - 10531588 ATTATTACCCTCCAA------------ATAAGGAATCTAAAA----------------------------------------------------------------------------------------------------TATTCAAA--CTTTTTTCTGACAATCTGAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909322 62 + 72247402 ATTGTTATCCTCCAA------------GTAAGAAATCTAAAACA------------------------------------------------------------------------------------------------ACTGCTCAAA---TTATTTCTGACAATCTGAGA i micMur3.chr20 C 0 I 55 s proCoq1.NW_012152729v1 2920557 62 + 9850184 ATTATTATCCTCCAA------------ATAAGAAATCTAAAACA------------------------------------------------------------------------------------------------ACTGCTCAAA---TTATTTCTGACAATCTGAGA i proCoq1.NW_012152729v1 C 0 I 2 s mm10.chr8 22447503 173 - 129401213 CTCATCTTCCACCCAGAACCACAGGCCAAAAGAAGCCTAAAATACTTTAGGGAAATGATCTGCAGAATTGATCAATTTTACATAAATGATGGAGACTACTCATAAATATCTTGGTCAGACTTAAGCTCTCTTTCCAGGTTATTGTTCATACTTTTCTTTATGACGATCCAAGA i mm10.chr8 I 10 C 0 s canFam3.chr5 80438090 63 + 88915250 ATTATTATCTTCCAA------------CTAAGAAATCCAAAATA------------------------------------------------------------------------------------------------AATGTTTAAA--CTTTTTCCTGAAAATCTGAGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902205 63 + 1009443 ATTATTATCCACCCA------------AAAAGAAATCTAGAATA------------------------------------------------------------------------------------------------ACTGTTCAGA--CTTTTTTCTGAAAATCTGAGA i dasNov3.JH569970 C 0 C 0 e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=292016.000000 s hg38.chr16_GL383557v1_alt 22971 28 + 89672 ATAATTTCTCAAACATTTTTGGTTTTTT s panTro5.chr16 21448971 28 - 81586097 ATAATTTCTCAAACATTTTTGGTTTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515769 28 - 90481686 ATAATTTCTCAAACATTTTTGGTTTGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748692 28 + 3010529 ATAATTTCTCAAACATTTTTGGTTTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861460 28 + 163208435 ATAATTTCTCAAATATTTTTGGTTTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335018 28 - 74971481 ATAATTCCTCAAATATTTTTGTTTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044319 28 - 78541002 ATAATTCCTCAAATATTTTTGTTTTTTT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765009 28 + 43916225 ATAATTCCTCAAGTATTTTTGTTTTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201625 28 + 75399963 ATAATTCCTCAAATATTTTTGTTTTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750474 28 - 7209941 ATAATTCCTCAAAtgtttttgttttttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492349 28 + 3907144 ATAATTTCTCAAATATTTTTGGTTTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505101 28 - 44557958 ATAATTTCTCAAATGTTTTCGGTTTTCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307657 28 + 6628207 ATAATTTCTCAAATGTTTTTGGTTTTCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293466 28 - 5917169 ATAATTTCTCAAATGTTTTTGGTTTTCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256148 28 - 10531588 ATAATTTCTTAAATGTTTTTGGTTTTCT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2920621 28 + 9850184 ACAATTTCTCACGTGTTtttgatttttt i proCoq1.NW_012152729v1 I 2 I 22 s mm10.chr8 22447676 28 - 129401213 ACAATTTCTCCGGTGTTTTTGGTTTTCT i mm10.chr8 C 0 I 2 s canFam3.chr5 80438153 23 + 88915250 AGAGTTTCTCAGGGG-----AGTTTTTT i canFam3.chr5 C 0 I 3 s dasNov3.JH569970 902268 11 + 1009443 -----------------ATTGTTTTTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54909384 55 + 72247402 I e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=252405.000000 s hg38.chr16_GL383557v1_alt 22999 31 + 89672 GGTTTGCTCTGGGCTTTTTGTTTTGTTTTCT s panTro5.chr16 21448999 31 - 81586097 GGTTTGCTCTGGGCTTTTTGTTTTGTTTTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515797 31 - 90481686 GGTTTGCTCTGGGCTTTTTGTTTTGTTTTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748720 31 + 3010529 GGTTTGCTCTGGGCTTTTTGTTTTGTTTTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861488 31 + 163208435 GGTTTGCTCTGGGCTTTTTGTTTTGTTTTCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335046 31 - 74971481 GGTTTGCTCCGGGCTTTTTGTTTTGTTTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044347 31 - 78541002 GGTTTGCTCCGGGCTTTTTGTTTTGTTTTCT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765037 31 + 43916225 GGTTTGCTCCGGGCTTTTTGTTTTGTTTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201653 31 + 75399963 GGTTTGCTCCGGGCTTTTTGTTTTGTTTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750502 31 - 7209941 ggtttgctccgggctttttgttttgttttCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492377 31 + 3907144 GGTTTGCTCCGGGCTTTTTGTTTTGTTTTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505129 31 - 44557958 GGTTTGCTCGGGGCTTTTTGCTTTGTTTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307685 31 + 6628207 GGTTTGCTTGGGGCTTTTTGCTTTGTTTTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293494 31 - 5917169 GGTTTGCTCGGGGCTTTTTGCTTTGTTTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256176 31 - 10531588 GGTTTGCTCGGGGCTTTTTGCTTTGTTTTTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22447706 16 - 129401213 TGCTTGCTC--GGTTTTT------------- i mm10.chr8 I 2 C 0 s canFam3.chr5 80438179 24 + 88915250 AGGTGGAAGAGGATGCATTGTGTT------- i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 902279 11 + 1009443 ----------GAG----TAGTTTTG------ i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54909384 55 + 72247402 I e proCoq1.NW_012152729v1 2920649 22 + 9850184 I e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=41939.000000 s hg38.chr16_GL383557v1_alt 23030 4 + 89672 GAGA s panTro5.chr16 21449030 4 - 81586097 GAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515828 4 - 90481686 GAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748751 4 + 3010529 GAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861519 4 + 163208435 GAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335077 4 - 74971481 GAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044378 4 - 78541002 GAGA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765068 4 + 43916225 GAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201684 4 + 75399963 GAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750533 4 - 7209941 GAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492408 4 + 3907144 GAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505160 4 - 44557958 GAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307716 4 + 6628207 GAGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293525 4 - 5917169 GAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256207 4 - 10531588 GAGG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2920671 4 + 9850184 GAGG i proCoq1.NW_012152729v1 I 22 C 0 s mm10.chr8 22447722 4 - 129401213 GAAG i mm10.chr8 C 0 C 0 e canFam3.chr5 80438203 0 + 88915250 C e micMur3.chr20 54909384 55 + 72247402 I e dasNov3.JH569970 902290 0 + 1009443 C e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1200294.000000 s hg38.chr16_GL383557v1_alt 23034 89 + 89672 AGTATTGTTGACA------ATAATCTAACAAAATTAACATTCCTTTCAGCTGTACACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC s panTro5.chr16 21449034 95 - 81586097 AGTATTGTTGACAATAAGTATAATCTAACAAAATTAACATTCCTTTCAGCTGTACACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515832 95 - 90481686 AGTATTGTTGACAATAAGTATAATCTAACAAAATTAACATTCCTTTCAGCTGTACACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748755 95 + 3010529 AGTATTGTTGACAATAAGTATAATCTAACAAAATTAACATTCCTTTCAGCTGTACACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861523 95 + 163208435 AGTGTTGTTGACAATAAGTATAATCTAACAAAACTAACATTCCTTTCAGCTGTACACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i nomLeu3.chr2 C 0 I 1 s rheMac8.chr20 21335081 95 - 74971481 AGTGTTGTTGACAATAAGTATAATATAACAAAATTAACATTCCTTTTAGCTGTATACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044382 95 - 78541002 AGTGTTGTTGACAATAAGTATAATATAACAAAATTAACATTCCTTTTAGCTGTATACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765072 95 + 43916225 AGTATTGTTGACAATAAGTATAATATAACAAAATTAACATTCCTTTTAGCTGTATACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201688 96 + 75399963 AGTGTTGTTGACAATAAGTATAATATAACACAATTAACATTTCTTTTAGCTATCCAAAGTTATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750537 95 - 7209941 AGTGTTGTTGACAATAAGTACAATATAACAAAATTAACATTCCTTTTAGCTATATACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492412 95 + 3907144 AGCGTTGTTGACAATAAGTATAATCTAACAAAATTAACATTCCTTTTAGCTGTATACTG-TATCCAAACCTGGCTAACACCCAATGATTTAGCAAC i colAng1.NW_012123265v1 C 0 I 317 s calJac3.chr20 21505164 95 - 44557958 AGTGTTGTTGACAAGAAGCATAATCTAGCAAAATTAACATTCCTTTCAACTGTACACTG-TATTCAAACCTGGTTAATACTCAATGATTAAGCAAT i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6307720 86 + 6628207 AGTGCTGTTGAC---------AATCTAGCAAAATTAACATTCCTTTCAGCTGTACACTG-TATTCAAACCTGGTTAATACTCAATGATTAAGCAAC i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3293529 95 - 5917169 AGTGCTGTTGACAATAAGTATAATCTAGCAAAACTGACATTCCTTTCAGCTGTATACTG-TACTCAAACCTGGTTAATACTCAATGATTAAGCAAT i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9256211 95 - 10531588 AGTGCTGTTGACAATAAGTATAATCTAGCAAAATTAACATTCCTTTCGGCTGTACACTG-TATTCAAACCTGGTTAATACTCAGTGATTAAGCAAC i aotNan1.NW_018500622v1 C 0 I 1 s micMur3.chr20 54909439 92 + 72247402 agtgttgttgACAATAAG---AATCTAACAGGATTAACATTCCTTTCGGCTGTACTCTG-TATCCAAACCTGGTTAATATCCAACAATTTAGCAGC i micMur3.chr20 I 55 I 1 s proCoq1.NW_012152729v1 2920675 92 + 9850184 AGTGTTGTTGACAATAAG---AATCTAACAGGATTAACATTCCTTTCAGCTGTACTCTG-TATCCAAACCTGGTTAATATCCAACAATTTAGCAGC i proCoq1.NW_012152729v1 C 0 I 1 s mm10.chr8 22447726 94 - 129401213 CTCGTTTTTGGCAGTAAGTACTGTGTGAATGCATTAACATTCCTTTCAGTT-CACAGTC-TATCTAACCCTGGAAAATACCCAGTGACTTAGCACT i mm10.chr8 C 0 I 10 s canFam3.chr5 80438203 91 + 88915250 ---GTTGTTGACAATAAACACAATCTAACAGGGTTAACATATCTTTCGGCTGAACTTTG-TTCATAAA-CTGGTTAATACCCAATGATTTGCCAAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902290 92 + 1009443 -CTGTTGTTGACAATAAACACCATCTAATAGGATTAGCATTCCTTTCAGTTGTACTATG-CATGCAAACCTG--TAATACCCATTGATTTAGCAAT i dasNov3.JH569970 C 0 I 1 e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=144672.000000 s hg38.chr16_GL383557v1_alt 23123 18 + 89672 GTTACCCACCCTCAATTT----- s panTro5.chr16 21449129 18 - 81586097 GTTACCCACCCTCAATTT----- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515927 18 - 90481686 GTTACCCACCCTCAATTT----- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748850 18 + 3010529 GTTACCCACCCTCAATTT----- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861619 18 + 163208435 GTTACCCACCCTCAATTT----- i nomLeu3.chr2 I 1 C 0 s rheMac8.chr20 21335176 15 - 74971481 ---AGTTACCCTCAATTT----- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044477 15 - 78541002 ---AGTTACCCTCAATTT----- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765167 15 + 43916225 ---AGTTACCCTCAATTT----- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201784 15 + 75399963 ---AGTTACCCTCAATTT----- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750632 15 - 7209941 ---AGTTACCCTCAATTT----- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21505260 18 - 44557958 ATTACCCACCCCCAATTT----- i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6307807 18 + 6628207 GTTACCCACCCCCAATTT----- i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3293625 18 - 5917169 GTTACCAACCCCCAATTT----- i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9256307 18 - 10531588 GTTACCCACTCCCAATTT----- i aotNan1.NW_018500622v1 I 1 C 0 s micMur3.chr20 54909532 18 + 72247402 GTTCCCCACCCCCAACTT----- i micMur3.chr20 I 1 C 0 s proCoq1.NW_012152729v1 2920768 18 + 9850184 GTTCCCCACCCCCAACTT----- i proCoq1.NW_012152729v1 I 1 C 0 s mm10.chr8 22447830 18 - 129401213 CTTCCCCACCCCAAGTTG----- i mm10.chr8 I 10 C 0 s canFam3.chr5 80438294 18 + 88915250 AGTCCCCAATACCAACTT----- i canFam3.chr5 C 0 I 199 s dasNov3.JH569970 902383 23 + 1009443 GCTATCCATCCCAACTTTTTttt i dasNov3.JH569970 I 1 C 0 e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e colAng1.NW_012123265v1 492507 317 + 3907144 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=23076.000000 s hg38.chr16_GL383557v1_alt 23141 4 + 89672 -TAAA s panTro5.chr16 21449147 4 - 81586097 -TAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515945 4 - 90481686 -TAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748868 4 + 3010529 -TAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861637 4 + 163208435 -TAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335191 4 - 74971481 -TAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044492 4 - 78541002 -TAAA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765182 4 + 43916225 -TAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201799 4 + 75399963 -TAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750647 4 - 7209941 -TAAA i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21505278 4 - 44557958 -TAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307825 4 + 6628207 -TAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293643 4 - 5917169 -TAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256325 4 - 10531588 -TAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909550 3 + 72247402 -AAA- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920786 3 + 9850184 -AAA- i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447848 4 - 129401213 -AAAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80438511 4 + 88915250 -TAAA i canFam3.chr5 I 199 C 0 s dasNov3.JH569970 902406 4 + 1009443 ttaa- i dasNov3.JH569970 C 0 C 0 e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e colAng1.NW_012123265v1 492507 317 + 3907144 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=80394.000000 s hg38.chr16_GL383557v1_alt 23145 7 + 89672 CACACAT s panTro5.chr16 21449151 7 - 81586097 CACACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515949 7 - 90481686 CACACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748872 7 + 3010529 CACACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861641 7 + 163208435 CATATAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335195 7 - 74971481 CATACAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044496 7 - 78541002 CATACAT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765186 7 + 43916225 CATACAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201803 7 + 75399963 CATACAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750651 7 - 7209941 CATACAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492824 7 + 3907144 cACACAT i colAng1.NW_012123265v1 I 317 C 0 s calJac3.chr20 21505282 7 - 44557958 CATACAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307829 7 + 6628207 CATACAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293647 7 - 5917169 CATACAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256329 7 - 10531588 CATACAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909553 7 + 72247402 AATAAAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920789 7 + 9850184 AATAAAT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447852 7 - 129401213 AATGCAT i mm10.chr8 C 0 C 0 s canFam3.chr5 80438515 7 + 88915250 AATACAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902410 7 + 1009443 gatttat i dasNov3.JH569970 C 0 C 0 e macNem1.NW_012011355v1 14441019 1439 + 26466322 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=118958.000000 s hg38.chr16_GL383557v1_alt 23152 10 + 89672 CTCTTTCATA s panTro5.chr16 21449158 10 - 81586097 CTCTTTCATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515956 10 - 90481686 CTCTTTCATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748879 10 + 3010529 CTCTTTCATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861648 10 + 163208435 CTCCTTCATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335202 10 - 74971481 CCCTTTCAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044503 10 - 78541002 CCCTTTCAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023862 10 - 26466322 CTCTTTCAGA i macNem1.NW_012011355v1 n 1439 C 0 s cerAty1.NW_011999143v1 20765193 10 + 43916225 CCCTTTCAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201810 10 + 75399963 CCCTTTCAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750658 10 - 7209941 CCCTTTCAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492831 10 + 3907144 TCCTTTCAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505289 10 - 44557958 CCCTTTTATA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307836 10 + 6628207 CCCTTTTATA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3293654 10 - 5917169 CCCTTTTATA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256336 10 - 10531588 CCCTTTTATA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909560 10 + 72247402 TCCTTTCACA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920796 10 + 9850184 TCCTTTCACA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447859 10 - 129401213 TCCTTTCATA i mm10.chr8 C 0 C 0 s canFam3.chr5 80438522 9 + 88915250 TCCTTTCAT- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902417 10 + 1009443 ttctttttta i dasNov3.JH569970 C 0 I 427 e otoGar3.GL873566 13673911 813 + 13852661 T a score=195085.000000 s hg38.chr16_GL383557v1_alt 23162 11 + 89672 AAGAATTTTAG s panTro5.chr16 21449168 11 - 81586097 AAGAATTTTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515966 11 - 90481686 AAGAATTTTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748889 11 + 3010529 AAGAATTTTAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861658 11 + 163208435 AAGAATTTTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335212 11 - 74971481 AAGAATTTTAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044513 11 - 78541002 AAGAATTTTAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023872 11 - 26466322 AAGAATTTTAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765203 11 + 43916225 AAGAATTTTAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201820 11 + 75399963 AAGAATTTTAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750668 11 - 7209941 AAGAATTTTAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492841 11 + 3907144 AAGAATTCTAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505299 11 - 44557958 AAGAATTTTAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6307846 11 + 6628207 AAGAATTTTAg i saiBol1.JH378225 C 0 M 2293 s cebCap1.NW_016107433v1 3293664 11 - 5917169 AAGAATTTTAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256346 11 - 10531588 AAGAATTTTAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909570 11 + 72247402 AAGAATTTCAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920806 11 + 9850184 AAGAATCTCAG i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447869 11 - 129401213 AAAAATTTTAG i mm10.chr8 C 0 I 5 s canFam3.chr5 80438531 11 + 88915250 AATAATTTTAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 902854 11 + 1009443 AAGAATTTTAA i dasNov3.JH569970 I 427 C 0 e otoGar3.GL873566 13673911 813 + 13852661 T a score=273723.000000 s hg38.chr16_GL383557v1_alt 23173 21 + 89672 ATTTCTTCAAATGGATAA----AAT s panTro5.chr16 21449179 21 - 81586097 ATTTCTTCAAATGGATAA----AAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515977 21 - 90481686 ATTTCTTCAAATGGATAA----AAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748900 21 + 3010529 ATTTCTTCAAATGGATAA----AAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861669 21 + 163208435 ATGTCTTCAAATGGATAA----AAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335223 21 - 74971481 ATTTCTTCAAATGGATAA----AAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044524 21 - 78541002 ATTTCTTCAAATGGATAA----AAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023883 21 - 26466322 ATTTCTTCAAATGGATAA----AAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765214 21 + 43916225 ATTTCTTCAAATGGATAA----AAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201831 21 + 75399963 ATTTCTTCAAATGGATAA----AAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750679 21 - 7209941 ATTTCTTCAAATAGATAA----AAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492852 21 + 3907144 ATTTCTTCAAAAGGATAA----AAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505310 25 - 44557958 ATTTTTTCAAATGGATAAAATTAAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3293675 25 - 5917169 ATTTTTTCAAATGGATAAAATTAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256357 25 - 10531588 ATTTTTTCAAATGGATAAAATTAAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909581 25 + 72247402 GTTTCTTAAAATGGATCAAATTAAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920817 25 + 9850184 ATTTCTTCAGACAGATCAAATTAAT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22447885 21 - 129401213 TTTTCCTCAAGTGGATGA----AGT i mm10.chr8 I 5 I 1055 s canFam3.chr5 80438542 21 + 88915250 ATTTCTTCAAATGGATAA----AAT i canFam3.chr5 C 0 I 4 s dasNov3.JH569970 902865 21 + 1009443 ATTCCCCCAAAAGGATAA----AAT i dasNov3.JH569970 C 0 I 4 e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=403477.000000 s hg38.chr16_GL383557v1_alt 23194 31 + 89672 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG s panTro5.chr16 21449200 31 - 81586097 ATCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21515998 31 - 90481686 ATCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748921 31 + 3010529 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861690 29 + 163208435 ACCTT--ACTAAGCAGTATTAAGGA---TTTATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335244 31 - 74971481 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044545 31 - 78541002 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023904 31 - 26466322 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765235 31 + 43916225 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201852 31 + 75399963 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750700 31 - 7209941 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492873 31 + 3907144 ACCTT--ACTAAGCAGTATTAAAGGA-TTTTATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505335 33 - 44557958 ACCTTAAACAAAGCAGTATTCAAGGA-TTTTATG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3293700 33 - 5917169 ACCTTATACAAAGCAGTATTCAAGGA-TTTTATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256382 33 - 10531588 ACCTTACACAAAGCAGTATTCAAGGA-TTTTATG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909606 32 + 72247402 ACCTT--ACTAAGCAGTATTAAAGGATTTTTATG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920842 32 + 9850184 ACCTT--ACTAAGCAGTATTAAAGGATTTTTATG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80438567 31 + 88915250 ACCTT--ACCAAGCAGTATTAAAGGA-TTTTATC i canFam3.chr5 I 4 C 0 s dasNov3.JH569970 902890 31 + 1009443 ACCTT--ACTAACCAGTATTAAAGGA-TTTTATG i dasNov3.JH569970 I 4 I 407 e mm10.chr8 22447906 1055 - 129401213 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=86631.000000 s hg38.chr16_GL383557v1_alt 23225 9 + 89672 TCCCCGCCT s panTro5.chr16 21449231 9 - 81586097 TCCCCGCCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516029 9 - 90481686 TCCCCGCCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748952 9 + 3010529 TCCCCGCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861719 9 + 163208435 TCCCCACTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335275 9 - 74971481 TCCCCATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044576 9 - 78541002 TCCCCGTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023935 9 - 26466322 TCCCCGTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765266 9 + 43916225 TCCCCGTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201883 9 + 75399963 TCCCGGTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750731 9 - 7209941 TCCCCGTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492904 9 + 3907144 TCCCCGCCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505368 9 - 44557958 TCCCTGCCT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3293733 9 - 5917169 TCCCTGCCT i cebCap1.NW_016107433v1 C 0 I 308 s aotNan1.NW_018500622v1 9256415 9 - 10531588 TCCCTGCCT i aotNan1.NW_018500622v1 C 0 I 277 s micMur3.chr20 54909638 9 + 72247402 TCCATGCCT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920874 9 + 9850184 TCCATGCCT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80438598 9 + 88915250 TCCATGCCT i canFam3.chr5 C 0 C 0 e mm10.chr8 22447906 1055 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=241649.000000 s hg38.chr16_GL383557v1_alt 23234 19 + 89672 CCCTAATCCTTTCCATTTT s panTro5.chr16 21449240 19 - 81586097 CCCTAATCCTTTCTATTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516038 19 - 90481686 CCCTAATCCTTTCTATTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748961 19 + 3010529 CCCTAATCCTTTCTATTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861728 17 + 163208435 CCT--ATCCTTTCTATTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335284 19 - 74971481 CCCTAATCCTTTCTATTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044585 19 - 78541002 CCCTAATCCTTTCTATTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023944 19 - 26466322 CCCTAATCCTTTCTATTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765275 19 + 43916225 CCCTAATCCTTTCTATTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201892 19 + 75399963 CCCTAATCCTTTCTATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750740 19 - 7209941 CCCTAATCCTTTCTATTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492913 19 + 3907144 CCTTAATCCTTTCTATTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505377 19 - 44557958 CCCTAATCTCTCttttttt i calJac3.chr20 C 0 I 285 s cebCap1.NW_016107433v1 3294050 19 - 5917169 cCCTAATCCTTTCTATTTT i cebCap1.NW_016107433v1 I 308 C 0 s aotNan1.NW_018500622v1 9256701 19 - 10531588 cCCTAATCCTTTCTATTTT i aotNan1.NW_018500622v1 I 277 C 0 s micMur3.chr20 54909647 19 + 72247402 CCCTAATCCTTTCTATTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920883 19 + 9850184 CCCTAATCCTTTCTATTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80438607 19 + 88915250 CCTTAATCCTTTCTATTTT i canFam3.chr5 C 0 C 0 e mm10.chr8 22447906 1055 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=967264.000000 s hg38.chr16_GL383557v1_alt 23253 95 + 89672 --GCTA-TGTTTTTTCCTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTGGCCTGCTGCTTTAAATACAGATCTACATTTAAGAGAGTTTTACAA s panTro5.chr16 21449259 95 - 81586097 --GCTA-TGTTTTTTCCTATTCA-GCACCACATCAACA--TCACATA---AATAAC---------TTGGCCTGCTGCTTTAAATACAGATCTACATTTAAGAGAGTTTTACAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516057 95 - 90481686 --GCTA-TGTTTTTTCCTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTGGCCTGCTGCTTTAAATACAGATCTACATTTAAGAGAGTTTTACAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 748980 95 + 3010529 --GCTA-TGTTTTTTCCTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTGGCCTGCTGCTTTAAATACAGATCTACATTTAAGAGAGTTTTACAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861745 93 + 163208435 --GCTA-TTTTTTTTCCTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTGGCCTGCTGCTTTAAATACAGAGCTCCATTTA--AGAGTTTTACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335303 94 - 74971481 --GCTG-T-TTTTTTACTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTAGCCTGCTGCTTTAAATACAGATGGACATTTAACAGAGTTTTACAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044604 94 - 78541002 --GCTG-T-TTTTTTACTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTAGCCTGCTGCTTTAAATACAGATGGACATTTAAGAGAGTTTTACAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12023963 94 - 26466322 --GCTG-T-TTTTTTACTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTAGCCTGCTGCTTTAAATACAGATGGACATTTAAGAGAGTTTTACAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765294 94 + 43916225 --GCTG-T-TTTTTTACTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTAGCCTGCTGCTTTAAATACAGATGGACATTTAAGAGAGTTTTACAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58201911 94 + 75399963 --GCTG-T-TTTTTTACTATTCA-GCACCATATCAACA--TCACATA---AATAAG---------TTAGCCTGCTGCTTTAAATACAGATCGACATTTAAGAGAGTTTTACAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750759 94 - 7209941 --GCTG-T-TTTTTTACTATTCA-GCACCACATCAACA--TCACATA---AATAAG---------TTAGCCTGCTGCTTTAAATACAGATGGACATTTAAGAGAGTTTTACAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 492932 98 + 3907144 --GCTGTT-TTTTTTACTATTCA-GCACCACATCAACA--TCACATAAATAATAAG---------TTGGCTTGCTGCTTTAAATACAGATCGACATTTAAGAGAGTTTTACAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505681 92 - 44557958 --GCCA-TTTTTCCCCCCATTCA-GCACCACATCAACA-----TATA---AATAAG---------TTAGCCTGCTGCTTTAAGTAAAGATCTACATTTAAGAGAGTTTTACAA i calJac3.chr20 I 285 C 0 s cebCap1.NW_016107433v1 3294069 97 - 5917169 --GCCA-TTTTTTTTCCCATTCA-GCACCACATCAACATATTGTATA---AATAAG---------TTAGCCTGCTGCTTTAAGTAAAGATCTACATTTAAGAGAGTTTTACAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9256720 83 - 10531588 --GCCATTTTTTTTTCCCATTCA-GCACCACATCAACA-----TATA---AATAAG---------TTAGCCTGCTGCTTTAAGTAAAGATCTACA----------TTTTACAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909666 103 + 72247402 --GCCA-T-TTCCCCCCCATTCA-GCACAACATCAACA--TCACAAA---AATAAGATCTGTACTTAAGCCTGCTGCTTTAAGTACAGATCTACATTGAAAAGAGTTCTACAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920902 94 + 9850184 --GCCA-T-TTTCCCCCCATTCA-GCACAACATCAACA--TCACAAA---AATAAG---------TTAGCCTGCTGCTTTAAGTACAGATCTACATTTAAGAGAGTTCTACAA i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80438626 96 + 88915250 GCAACA-T-CCTCCCACTATCCATTCAGCAGATCAACA--TGGCAAA---AATAAG---------TTAGCCTGC-ATTTTAAGTACAGACCTGCATCTGAGGGAATCTTACAA i canFam3.chr5 C 0 C 0 e mm10.chr8 22447906 1055 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=1000695.000000 s hg38.chr16_GL383557v1_alt 23348 87 + 89672 GTTATAAGATGGCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCAGTGACATTAAT s panTro5.chr16 21449354 87 - 81586097 GTTATAAGATGGCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCAGTGACATTAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516152 87 - 90481686 GTTATAAGATGGCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCAGTGACATTAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749075 87 + 3010529 GTTATAAGATGGCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCAGTGACATTAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861838 87 + 163208435 GTTATAAGATGGCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATTGGTGTTAATGAGGTGTCCTTCTAGTTCAGTGACATTAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335397 87 - 74971481 GTTATAAGACGGCAACTTTTT-GGCTTAGTACATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCGGTGACATTAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044698 87 - 78541002 GTTATAAGACGGCAACTTTTT-GGCTTAGTACATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCGGTGACATTAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024057 87 - 26466322 GTTATAAGATGGCAACTTTTT-GGCTTAGTACATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCGGTGACATTAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765388 87 + 43916225 GTTATAAGACGGCAACTTTTT-GGCTTAGTACATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTCGGTGACATTAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202005 87 + 75399963 GTTATAAGACGGCAACTTTTT-GGCTTAGTACATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTTCTAGTTTGGTGACATTAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750853 87 - 7209941 GTTATAAGACGGCAACTTTTT-GGCTTAGTACATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCCTCCTAGTTCGGTGACATTAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493030 87 + 3907144 GTTATAAGACGGCAACTCTTT-GGCTTAGTGCATTCTC-----TCCCATTTATTGGTGTTAATGAGGAGTCTTTCTAGTTCGGTGACATTAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505773 86 - 44557958 GTTATAAGAT-GCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATCAGTGTTAATGAGGAGTAATTCTAGTCCCGTGACAGTAAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3294166 87 - 5917169 GTTATAAAATGGCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATCAGTGTTAATGAGGAGCCATTCTAGTCCTGTGACATTAAT i cebCap1.NW_016107433v1 C 0 I 2264 s aotNan1.NW_018500622v1 9256803 87 - 10531588 GTTATAAGATGTCAACTTTTT-GGCTTAGTGCATTCTC-----TCCCATTTATCAGTGTTAATGACGAGCCATTCTAGTCCTGTGACATTAAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54909769 80 + 72247402 GTTGTAAGACTACAACTTTTT-AGTTCAGTGCATTTTC-----TCTCATTT----GTGTTGATGAGTAGCC---CTAGTTTGGTGACATTAAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2920996 84 + 9850184 GTTGTAAGACTACAGCTTTTT-AGTTCAGTGCATTTTC-----TCTCATTTACTAGTGTTGATGAGTAGTC---CTAGTTTGGTGACATTAAT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22448961 78 - 129401213 GTTTTAAGATTGCAACTTTTTGGGTTCAGTGAGTTT------------CTTATTTGAGCTAATCAGCAGTC---CTAGCTCTTTGACACTGAC i mm10.chr8 I 1055 C 0 s canFam3.chr5 80438722 68 + 88915250 GTTATAAGACTGCAACTTTT--GGTTCAGTGCACTCCCCCCCACCCCATTTATTAATGC-----------------------GTGCCACTAAT i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 902921 407 + 1009443 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=33482.000000 s hg38.chr16_GL383557v1_alt 23435 3 + 89672 ACT s panTro5.chr16 21449441 3 - 81586097 ACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516239 3 - 90481686 ACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749162 3 + 3010529 ACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861925 3 + 163208435 ACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335484 3 - 74971481 ACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044785 3 - 78541002 ACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024144 3 - 26466322 ACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765475 3 + 43916225 ACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202092 3 + 75399963 ACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750940 3 - 7209941 ACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493117 3 + 3907144 ATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505859 3 - 44557958 ACC i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9256890 3 - 10531588 ACT i aotNan1.NW_018500622v1 C 0 I 491 s micMur3.chr20 54909849 3 + 72247402 ACT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2921080 3 + 9850184 ACT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22449039 3 - 129401213 ATC i mm10.chr8 C 0 C 0 s canFam3.chr5 80438790 3 + 88915250 ACC i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 902921 407 + 1009443 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=38580.000000 s hg38.chr16_GL383557v1_alt 23438 4 + 89672 ATTT s panTro5.chr16 21449444 4 - 81586097 ATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516242 4 - 90481686 ATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749165 4 + 3010529 ATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861928 4 + 163208435 ATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335487 4 - 74971481 ATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044788 4 - 78541002 ATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024147 4 - 26466322 ATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765478 4 + 43916225 ATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202095 4 + 75399963 ATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750943 4 - 7209941 ATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493120 4 + 3907144 ATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21505862 3 - 44557958 -ttt i calJac3.chr20 C 0 I 180 s micMur3.chr20 54909852 4 + 72247402 ATTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2921083 4 + 9850184 ATTA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22449042 4 - 129401213 ATTT i mm10.chr8 C 0 I 1 s canFam3.chr5 80438793 4 + 88915250 ATTA i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13673911 813 + 13852661 T a score=524267.000000 s hg38.chr16_GL383557v1_alt 23442 74 + 89672 CAATGCTAGCAA-TATACAAGGTGC--TTAAAT-AAAAGGTAAAGAAGCCATC-AAAATCCATTAAATAAGCATCTGTT s panTro5.chr16 21449448 74 - 81586097 CAATGCTAGCAA-TATACAAGGTGC--TTAAAT-AAAAGGTAAAGAAGCCATC-AAAATCCATTAAATAAGCATCTGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516246 74 - 90481686 CAATGCTAGCAA-TATACAAGGTGC--TTAAAT-AAAAGGTAAAGAAGCCATC-AAAATCCATTAAATAAGCATCTGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749169 74 + 3010529 CAATGCTAGCAA-TATACAAGGTGC--TTAAAT-AAAAGGTAAAGAAGCCATC-AAAATCCATTAAATAAGCATCTGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53861932 74 + 163208435 CAAGGCTAACAA-TATACAAGGTGC--TTAAAT-AAAAGGTAAAGAAGGCATC-AAAATCCATTAAATAAGCATCCGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335491 75 - 74971481 AAATGCTAACAA-TATACAAGATGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044792 75 - 78541002 AAATGCTAACAA-TATACAAGATGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024151 75 - 26466322 AAATGCTAACAG-TATACAAGATGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765482 75 + 43916225 AAATGCTAACAA-TATACAAGATGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202099 75 + 75399963 AAATGCTAACAA-TATACAAGACGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6750947 75 - 7209941 AAATGCTAACAA-TATACAAGATGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493124 75 + 3907144 AAATGCTAACAA-TATACAAGATGC--TTAAAT-AAAAGGTAAAGAAGGCCTCAAAAATCCATTAAATAAGCATCCGTT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54909856 75 + 72247402 CAATGCTAACACAAGTACAAGATGC--TTAAAT-AAAAGGTAAAGAAAGCATC-AAAACCCAATATATAATCACCTGTT i micMur3.chr20 C 0 I 351 s proCoq1.NW_012152729v1 2921087 75 + 9850184 CAATGCTAACAC-TGTACTAGACGC--TTAAATAAAAAGGTAAAGAAGGCATC-AAAATCCATTATATAATCATCTGTT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22449047 40 - 129401213 CAGTGGCAACAC-TGTATACGGCACCATTAAAT------------------TC--------------------TTTCTT i mm10.chr8 I 1 C 0 s canFam3.chr5 80438797 56 + 88915250 CAATGCTAATGC-CATACAAGATAC--TGAAAA-----------GGAGGCATC-AAAATCCTTTAAATAAT-------- i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=739476.000000 s hg38.chr16_GL383557v1_alt 23516 83 + 89672 CACATGTAATA-T-TTATTATTTCAGGTGGTAACTTTTAAGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC s panTro5.chr16 21449522 83 - 81586097 CACATGTAATA-T-TTATTATTTCAGGTGGTAACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516320 83 - 90481686 CACATGTAATA-T-TTATTATTTCAGGTGGTAACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749243 83 + 3010529 CACATGTAATA-T-TTTTTATTTCAGGTGGTAACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53862006 83 + 163208435 CACATGTAATA-T-TTATTATTTCAGGTGGTAACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCtttc i nomLeu3.chr2 C 0 I 1412 s rheMac8.chr20 21335566 82 - 74971481 CACATGTAAGA-T-TTATTATTTCAGGTGG-AACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044867 82 - 78541002 CACATGTAAGA-T-TTATTATTTCAGGTGG-AACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024226 82 - 26466322 CACATGTAAGA-T-TTATTATTTCAGGTGG-AACTCTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765557 82 + 43916225 CACATGTAAGA-T-TTATTATTTCAGGTGG-AACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202174 82 + 75399963 CACATGTAAGA-T-TTATTATTTCAGACAG-AACTTTTAGGCCAGGATGCTGTTTTCCCATGGCTTTCCTGAATGTTCTGCTTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751022 82 - 7209941 CACATGTAAGA-T-TTATTATTTCAGGTGG-AACTTTTAGGCCAGGATGCTGTTTTCCTATGGCTTTCCTGAATGTTCTGCTTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493199 83 + 3907144 CACATGTAAGA-T-TTATTATTTCAGGTGGTAACTTTTAGGCCAGGATGCTGTTTTCTTATGGCTTTCCTGAATGTTCTGCTTTC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910282 83 + 72247402 CACATGTAATA-T-TCATTATTTCAGGTGATAACTTTTAGGCCAGGATGCTTTTTTCCTATGGCTTCCCTAAATGTTCTACTTTC i micMur3.chr20 I 351 C 0 s proCoq1.NW_012152729v1 2921162 83 + 9850184 CACATGTAATA-T-TTATTATTTCAGGTGGTAACTTTTAGGGCAGGATGCTTTTTTCCTATGGCTTTCCTAAATGTTCTACTTTC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22449087 63 - 129401213 CACATGAAATG-CGTTATTACTTTAAGAGG---------------------CTTTTCCTGTGGCTCTCCTGAATATTCTGCTTTC i mm10.chr8 C 0 C 0 s canFam3.chr5 80438853 82 + 88915250 --CACATAAGACT-TCATTATCCCAAGTGGCAACTTCTAGGCCAGGATGCTTTTTTCCTTTGGCTTTCCTGAATATTCTATGCCA i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=379404.000000 s hg38.chr16_GL383557v1_alt 23599 47 + 89672 AAACCAGGCCCCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT s panTro5.chr16 21449605 47 - 81586097 AAACCAGGCCCCTGGAGGCCCTGAAAGTGTGACGAGGAGTAATTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516403 47 - 90481686 AAACCAGGCCCCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749326 47 + 3010529 AAACCAGGCCCCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21335648 47 - 74971481 AAACCAGACCTCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044949 47 - 78541002 AAACCAGACCTCTGGAGACCCTGAAAGTGTGATGAGGAGTAATTATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024308 47 - 26466322 AAACCAGACCTCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765639 47 + 43916225 AAACCAGACCTCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202256 47 + 75399963 AAACCAGACCTCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751104 47 - 7209941 AAACCAGACCTCTGGAGGCCCTGAAAGTGTGATGAGGAGTAATTATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493282 46 + 3907144 AAACCAGACCCCTGGAGGCCCTGAAAGTGTGATGAGGAGT-ATTATT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910365 47 + 72247402 AAACCAGGCCCTTGGAGGCTCTGCAAGTGAGAGGGAGAGTAATTATC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2921245 47 + 9850184 AAACCAGGCTCCTGGAGGCCCTGAAAGCGAGATGGAGAGTAATTATT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22449150 47 - 129401213 ACGTCAAGCCCTTAGTGGTCCTGAAAGCATGATGAGGAGCAACTGCT i mm10.chr8 C 0 I 497 s canFam3.chr5 80438935 47 + 88915250 AAACCAGACCTGTGGTGGCCCTGAAAGTGTGATGGGGAGTCATTATA i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T e nomLeu3.chr2 53862089 1412 + 163208435 I a score=-6430.000000 s hg38.chr16_GL383557v1_alt 23646 2 + 89672 -TT s panTro5.chr16 21449652 2 - 81586097 -TT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516450 2 - 90481686 -TT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749373 2 + 3010529 -TT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21335695 2 - 74971481 -TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044996 2 - 78541002 -TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024355 2 - 26466322 -TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765686 2 + 43916225 -TT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202303 2 + 75399963 -TT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751151 2 - 7209941 -TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493328 2 + 3907144 -TT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910412 1 + 72247402 -A- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2921292 1 + 9850184 -A- i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80438982 2 + 88915250 AT- i canFam3.chr5 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T e nomLeu3.chr2 53862089 1412 + 163208435 I a score=304488.000000 s hg38.chr16_GL383557v1_alt 23648 38 + 89672 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGT---TTTCA s panTro5.chr16 21449654 38 - 81586097 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGT---TTTCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516452 38 - 90481686 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGT---TTTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749375 38 + 3010529 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGT---TTTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863501 41 + 163208435 aaaTGGCAGAGAAATGACTTGATTTGTCTGAGGAGATTTCA i nomLeu3.chr2 I 1412 C 0 s rheMac8.chr20 21335697 38 - 74971481 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGA---TTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21044998 38 - 78541002 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGA---TTTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024357 38 - 26466322 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGA---TTTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20765688 38 + 43916225 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGA---TTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202305 38 + 75399963 AAAAAGCAGAGAAATGACTCCATTTGTCTGAGA---TTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751153 38 - 7209941 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGA---TTTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493330 38 + 3907144 AAAAAGCAGAGAAATGACTCGATTTGTCTGAGA---TTTCA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910413 38 + 72247402 AAAAAGCAGAGAAATGACTTGATCTGTCTGAGA---TTTCA i micMur3.chr20 C 0 I 21 s proCoq1.NW_012152729v1 2921293 38 + 9850184 AAAACACAGAGAAATGACTTGATTTGTCTGAGA---TTTCA i proCoq1.NW_012152729v1 C 0 I 909 s canFam3.chr5 80438984 38 + 88915250 AAAACAGAGAGAGAAGATTCCATTTATCTGATA---TTTTA i canFam3.chr5 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=67946.000000 s hg38.chr16_GL383557v1_alt 23686 12 + 89672 --GTGAC-------------------ATATAAA s panTro5.chr16 21449692 12 - 81586097 --GTGAC-------------------ATATAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516490 12 - 90481686 --GTGAC-------------------ATATAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749413 12 + 3010529 --GTGAC-------------------ATATAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863542 12 + 163208435 --GCGAC-------------------ATATAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335735 12 - 74971481 --GCGAC-------------------ACATAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045036 12 - 78541002 --GCGAC-------------------ACATAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024395 12 - 26466322 --GCGAC-------------------ACATAAA i macNem1.NW_012011355v1 C 0 I 387 s cerAty1.NW_011999143v1 20765726 12 + 43916225 --GCGAC-------------------ACATAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202343 12 + 75399963 --GCGAC-------------------ACATAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751191 12 - 7209941 --GCGAC-------------------ACATAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493368 12 + 3907144 --GCGAC-------------------ACATAAA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910472 12 + 72247402 --AGGAA-------------------ACACAAA i micMur3.chr20 I 21 C 0 s canFam3.chr5 80439022 33 + 88915250 GTGAGACATCACTGAAGAGGGAACAGATATAAA i canFam3.chr5 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=199404.000000 s hg38.chr16_GL383557v1_alt 23698 35 + 89672 CGAATTGGCTGCAGCA--ACTCGGTAAAGTGTTTGGT s panTro5.chr16 21449704 35 - 81586097 CGAATTGGCTGCAGCA--ACTCAGTAAAGTGTTTGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516502 35 - 90481686 CGAATTGGCTGCAGCA--ACTCGGTAAAGTGTTTGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749425 35 + 3010529 CGAATTGGCTGCAGCA--ACTCGGTAAAGTGTTTGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863554 35 + 163208435 CGAATTGGCTGCAGCA--ACTCGATCAAGTGTTTGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335747 35 - 74971481 CGAATTGGCTGCAGCA--ACTCGGTGAAGTGTTTGGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045048 35 - 78541002 CGAATTGGCTGCAGCA--ACTCGGTGAAGTGTTTGGT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765738 35 + 43916225 CGAACTGGCTGCAGCA--ACTCGGTGAAGTGTTTGGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202355 35 + 75399963 CGAATTGGCTGCAGCA--ACTCGGTGAAGTGTTTGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751203 35 - 7209941 CGAATTGGCTGCAGCA--ACTCGGTGAAGTGTTTGGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493380 35 + 3907144 CGAATTGGCTGCAGCA--ACTTGGTAAAGTGTTTGGT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910484 37 + 72247402 CAAATTGGCTGCAGCAGTGTTCGGTAAAGTGTCTGGT i micMur3.chr20 C 0 C 0 s canFam3.chr5 80439055 31 + 88915250 TGAATAGGT--CAGCAGTGTTTAGTAAAGTGAT---- i canFam3.chr5 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673911 813 + 13852661 T a score=1000869.000000 s hg38.chr16_GL383557v1_alt 23733 152 + 89672 AAAAGTTACAGAGCAGTCTTCTGCCATTA-CCCCACAAGAAGAAAATAATGAGGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAACATTACTTCAAGATGGATCACAGggccagact s panTro5.chr16 21449739 152 - 81586097 AAAAGTTACAGAGCAGTCTTCTGCCATTA-CCCCACAAGAAGAAAATAATGAGGATCTCTC---------AACTTTATCAGTCAGGTGCGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAACATTACTTCAAGATGGATCACAGggccagact i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516537 152 - 90481686 AAAAGTTACAGAGCAGTCTTCTGCCATTA-CCCCACAAGAAGAAAATAATGAGGATCTCTC---------AACTTTATCAGTCAGGTGCGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAACATTACTTCAAGATGGATCACAGggccagact i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749460 152 + 3010529 AAAAGTTACAGAGCAGTCTTCTGCCATTA-CCCCACAAGAAGAAAATAATGAGGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGACTCAATATACAAACATTACTTCAAGATGGATCACAGggccagact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863589 153 + 163208435 AAAAGTTACAGACCAGTCTTCTGCCATTACCCCCCCAAGAAGAAAATAATGAGCATGTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAGGATGGATCACAGggccaggct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335782 149 - 74971481 AAAAGTTACAGAGCAGTCTTCTGCCATCA-CCCCAC---AAGAAAATAATGCAGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAAGATGGATCACAGggccaggct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045083 149 - 78541002 AAAAGTTACAGAGCAGTCTTCTGCCATCA-CCCCAC---AAGAAAATAATGCAGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAAGATGGATCACAGggccaggct i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765773 149 + 43916225 AAAAGTTACAGAGCCGTCTTCTGCTATTA-CCCCAC---AAGAAAATAATGCGGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAAGATGGATCACAGggccaggct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202390 149 + 75399963 AAAAGTTACAGAGCAGTCTTCTGCCATTA-CCCCAC---AAGAAAATAATGCAGATCTCTC---------AACTTTATCAGTCACGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAAGATGGATCACAGggtcaggct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751238 149 - 7209941 AAAAGTTACAGAGCAGTCTTCTGCCATTA-CCCCAC---AAGAAAATAATGCAGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAAGATGGATCACAGggccaggct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493415 147 + 3907144 --AAGTTACAGAGCAGTCTTCTGCCATTA-CCCCAC---AAGAAAATAATGAAGATCTCTC---------AACTTTATCAGTCAGGTGAGGGTAAAGTAAAAGCAAACAAAAATAGAGTCAATATACAAAAATTACTTCAAGATGGATCACAGggccaggct i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54910521 161 + 72247402 AAAAGTTACAGAGCAGTCTTCTGCCATTATCCCCTCAA-AGAGAAATAATGAGGATCTCTAGGGTAGACAAACCATATCAGTCAAGTGAGGGCAAAGTAGTAGCAAACCAAAATACAGTTAACatacaaaaattacttcaagatggatcataggtctagact i micMur3.chr20 C 0 I 671 s otoGar3.GL873566 13673098 153 + 13852661 AAAAGTTACAGAGCAGACTTCTGCCATTA-CCCCTCTA-AGAGAAATAATGAGGATCTCTAAGCTAAAAGAACATTATCAGTCAAGCCAGGGCAAAGTAATA-------AAAATAGAGTCAATAAACAAAAATTACTTCAAGATGTATCCCAGGTCTAAACT i otoGar3.GL873566 T 813 C 0 s canFam3.chr5 80439086 154 + 88915250 AAAAGTTACACAGCAGTCTTCTGCCATTA-CCCTACAA-AATGAAATAATGAGGATCTTTAGGGTAGA--AGAGCCGTCAGTCAGGTGAGGACAAAGTAATAGCAAA--GAAACATAGTCAATACAAAAAAAGTATTTTAAGATGGATCATgaggc--aact i canFam3.chr5 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=48536.000000 s hg38.chr16_GL383557v1_alt 23885 10 + 89672 cggtggctca s panTro5.chr16 21449891 10 - 81586097 cggtggctca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516689 10 - 90481686 cggtggctca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749612 10 + 3010529 tggtggctca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863742 10 + 163208435 cggtggctcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335931 10 - 74971481 cggtggctgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045232 10 - 78541002 cggtggctgg i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765922 10 + 43916225 cggtggctgg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202539 10 + 75399963 cggtggctgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751387 10 - 7209941 cggtggctgg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493562 10 + 3907144 cggtggctgg i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13673251 3 + 13852661 -------TAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80439240 10 + 88915250 cggtggctca i canFam3.chr5 C 0 I 2456 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=203169.000000 s hg38.chr16_GL383557v1_alt 23895 41 + 89672 cacctgtaatcccagaaatttgggaagccaaggctggagga s panTro5.chr16 21449901 41 - 81586097 cacctgtaatcccagaaatttgggaggccaaggctgcagga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516699 41 - 90481686 cacctgtaatcccagaaatttgggaggccaaggctggagga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749622 41 + 3010529 cacctgtaatcccagaaatttgggaggccaaggctggagga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863752 41 + 163208435 cacctgtaatcccagcaatttgggaggccaaagctggagga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335941 41 - 74971481 tacctgtaatcccagcaatttgggaggccaaggctggagga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045242 41 - 78541002 tacctgtaatcccagcaatttgggaggccaaggctggagga i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765932 41 + 43916225 tacctgtaatcccagcaatttgggaggccaaggctggagga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202549 41 + 75399963 tacctgtaatcctagcaatttgggaggccaaggctggagga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751397 41 - 7209941 tacctgtaatcccagcaatttgggaggccaaggctggagga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493572 41 + 3907144 tacctgtaatcccagcaatttgggaggccaaggctggagga i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13673254 41 + 13852661 CACTCATAACCGTAAAGAATAAGAAAGCCTAGATTTTCTCA i otoGar3.GL873566 C 0 I 777 e canFam3.chr5 80439250 2456 + 88915250 I e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=262730.000000 s hg38.chr16_GL383557v1_alt 23936 51 + 89672 tgacttgagcttaggagttcaagaccagcctggacattgtagcaagacccc s panTro5.chr16 21449942 51 - 81586097 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21516740 51 - 90481686 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 749663 51 + 3010529 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53863793 51 + 163208435 tgacttgagcctaggagttcaagaccagcctggacatcgtagcaagacccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21335982 51 - 74971481 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045283 51 - 78541002 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20765973 51 + 43916225 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202590 51 + 75399963 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751438 51 - 7209941 tgacttgagcctaggagttcaagaccagcctggacattgtagcaagacccc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493613 51 + 3907144 tgacttgagcctaggagttcaagaccagcctggacactgtagcaagaaccc i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80439250 2456 + 88915250 I e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=1343530.000000 s hg38.chr16_GL383557v1_alt 23987 263 + 89672 catctctatttaaaaacaaaa-caaaaa--taaaataaataaacgaaacaaaacatagtacaatataatgaaaACTCATGT-ACTCAATTTTATCACTGTTAACATTC------------TCAGTTTCA--------CTAACAAAAAACCCCCATGAACCTCTCCTTGACGCCATTTATCTTCCTCCTGCTC---TAGCAGTTATATCCTAAATTTGATGTATCACGAATGTGTTGTTTTTCTTGTATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA s panTro5.chr16 21449993 263 - 81586097 catctctatttaaaaacaaaa-caaaaa--taaaataaataaacgaaacaaaacatagtacaatataatgaaaACTCATGT-ACTCAATTTTATCACTGTTAACATTC------------TCAGTTTCA--------CTAACAAAAAACCCCCATGAACCTCTCCTTGACGCCATTTATCTTCCTCCTGCTC---TAGCAGTTATATCCTAAATTTGATGTATCACGAATGTGTTGTTTTTCTTGTATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i panTro5.chr16 C 0 I 31 s panPan2.chr16 21516791 263 - 90481686 catctctatttaaaaacaaaa-caaaaa--taaaataaataaacgaaacaaaacatagtacaatataatgaaaACTCATGT-ACTCAATTTTATCACTGTTAACATTC------------TCAGTTTCA--------CTAACAAAAAACCCCCATGAACCTCTCCTTGACGCCATTTATCTTCCTCCTGCTC---TAGCAGTTATATCCTAAATTTGATGTATCACGAATGTGTTGTTTTTCTTGTATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i panPan2.chr16 C 0 I 31 s gorGor5.CYUI01000018v1 749714 263 + 3010529 catctctatttaaaaacaaaa-caaaaa--taaaataaataaacgaaacaaaacatagtacaatataatgaaaACTCATGT-ACTCAATTTTACCACTGTTAACATTC------------TCAGTTTCA--------CTAACAAAAAACCCCCATGAACCTCTCCTTGACGCCATTTATCTTCCTTCTGCTC---TAGCAGTTATATCCTAAATTTGATGTATCACGAATGTGTTGTTTTTCTTGTATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i gorGor5.CYUI01000018v1 C 0 I 31 s nomLeu3.chr2 53863844 264 + 163208435 catctctatttaaaaaaaaaagcaaaaa--taaaataaataaacaaaacaaaacagagtacaatataatgaaaACTCACGT-ACTCAATTTTATCAGTGTTAACATTC------------TCAGTTTTA--------CTAACAAAAAACCCCCATCAACTTCTCCTTGACTCCATTTATCTTCCTCCTGCTC---TAGCAGTTATATCCTAAATTTGATGTATCACAAATGTGTTGTTTTTCTTATATTTCAA-TTGATTGGCCTGAAAAATAAAGCATATTCCAAAAGCA i nomLeu3.chr2 C 0 I 31 s rheMac8.chr20 21336033 265 - 74971481 cgtctctatttaaaaacaaaC-CAAAAA--TAAAATAAATAAACAAAACAAA--AGGGTACAATATAATGAAAACTCACGT-ACTCAATTTTATCAGTGTTAACATTC------------TCAGTTTTA----CTTCCTAACAAAaaatccccgtgaacctctccttgactccatttatcttcctcctgctc---tagcagttatatcctaaatttggtgtatcaCAAATGTGTTGTTTTTCCTGCATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045334 265 - 78541002 cgtctctatttaaaaacaaaC-CAAAAA--TAAAATAAATAAACAAAACAAA--AGGGTACAATATAATGAAAACTCACGT-ACTCAATTTTATCAGTGTTAACATTC------------TCAGTTTTA----CTTCCTAACAAAAAATCCCCGTGAACCTCTCCTTGACTCCATTTATCTTCCTCCTGCTC---TAGCAGTTATATCCTAAATTTGGTGTATCACAAATGTGTTGTTTTTCCTGCATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20766024 265 + 43916225 cgtctctatttaaaaacaaaC-CAAAAA--TAAAATAAATAAACAAAACAAA--AGGGTACAATATAATGAAAACTCACGT-ACTCAATTTTATCAGTGTTAACATTC------------TCAGTTTTA----CTTCCTAACAAAaaatccccgtgaacctctccttgactccatttatcttcctcctgctc---tagcagttatatcctaaatttggtgtatcaCAAATGTGTTGTTTTTCCTGCATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58202641 265 + 75399963 cgtatctatttaaaaacaaac-caaaaa--TAAAATAAATAAACAAAACAAA--AGAGTACAATATAATGAAAACTCACGT-ACTCAATTTTACCAGTGTTAACATTC------------TCAGTTTTA----CTTCCTAACAAAAAATCCCCGTGAACCTCTCCTTGACTCCATTTATCTTTCTCCTGCTC---TAGCAGTTATATCCTAAATTTGGTGTATCACAAATGTGTTGTTTTTCCTGCATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751489 265 - 7209941 cgtctctacttaaaaacaaaC-CAAAAA--TAAAATAAATAAACAAAACAAA--AGGGTACAATATAATGAAAACTCACGT-ACTCAATTTTATCAGTGTTAACATTC------------TCAGTTTTA----CTTCCTAACAAAaaatccccgtgaacctctccttgactccatttatcttcctcctgctc---tagcagttatatcctaaatttggtgtatcaCAAATGTGTTGTTTTTCCTGCATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCCAAAAGCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 493664 267 + 3907144 cgtctctatttaaaaacaaaC-CAAAAA--TAAAATAAATAAACAAAACAAAACAGAGTACAATACAATGAAAACTCACGT-ACTCAATTTTATCAGTGTTAACATTC------------TCAGTTTTA----CTTCCTAACAAAAAATCCCCGTGAACCTCTCCTTGACTCCATTTAACTTCCTCCTGCTC---TAGCACTTATATCCTAAATTTGGTGTATCACAAATGTGTTGTTTTTCCTGCATTTCAA-CCCATGGGCCTGAAAAATAAAGCATATTCTGAAAGCA i colAng1.NW_012123265v1 C 0 I 582 s canFam3.chr5 80441706 286 + 88915250 CATCTGAAtttgaaaacctgt-gaaatatttaaaatacactaaaaaaataa---agagaacaacacaatgaacactcatataactcaactttatcaatcttcacattctgtcatatttattcagctttatttaCTTCCTAACAAAAAGCCCCCATGAACCTCTCTTTCACTCCATTCATCCTCCTGGTGCCCTTGTAGTAATTGTACCCTAAA-TTGGTGTATAACAAATTCATTATTTTTCTTGTACATCAATTCCAAGGACCTAAAAAATAAACTGCATTGCAATAGCA i canFam3.chr5 I 2456 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=12012.000000 s hg38.chr16_GL383557v1_alt 24250 2 + 89672 TT s panTro5.chr16 21450287 2 - 81586097 TT i panTro5.chr16 I 31 C 0 s panPan2.chr16 21517085 2 - 90481686 TT i panPan2.chr16 I 31 C 0 s gorGor5.CYUI01000018v1 750008 2 + 3010529 TT i gorGor5.CYUI01000018v1 I 31 C 0 s nomLeu3.chr2 53864139 2 + 163208435 TT i nomLeu3.chr2 I 31 C 0 s rheMac8.chr20 21336298 2 - 74971481 TT i rheMac8.chr20 C 0 I 31 s macFas5.chr20 21045599 2 - 78541002 TT i macFas5.chr20 C 0 I 31 s cerAty1.NW_011999143v1 20766289 2 + 43916225 TT i cerAty1.NW_011999143v1 C 0 I 31 s chlSab2.chr5 58202906 2 + 75399963 TT i chlSab2.chr5 C 0 I 327 s manLeu1.NW_012101698v1 6751754 2 - 7209941 TT i manLeu1.NW_012101698v1 C 0 I 31 s colAng1.NW_012123265v1 494513 2 + 3907144 TT i colAng1.NW_012123265v1 I 582 C 0 s canFam3.chr5 80441992 2 + 88915250 TT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=17065.000000 s hg38.chr16_GL383557v1_alt 24252 4 + 89672 CATA s panTro5.chr16 21450289 4 - 81586097 CATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517087 4 - 90481686 CATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750010 4 + 3010529 CATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864141 4 + 163208435 CATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336331 4 - 74971481 CATA i rheMac8.chr20 I 31 C 0 s macFas5.chr20 21045632 4 - 78541002 CATA i macFas5.chr20 I 31 C 0 s cerAty1.NW_011999143v1 20766322 4 + 43916225 CATA i cerAty1.NW_011999143v1 I 31 C 0 s manLeu1.NW_012101698v1 6751787 4 - 7209941 CATA i manLeu1.NW_012101698v1 I 31 C 0 s colAng1.NW_012123265v1 494515 4 + 3907144 CATA i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80441994 4 + 88915250 TTTA i canFam3.chr5 C 0 I 891 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e chlSab2.chr5 58202908 327 + 75399963 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=28350.000000 s hg38.chr16_GL383557v1_alt 24256 8 + 89672 CCTGTAAT s panTro5.chr16 21450293 8 - 81586097 CCTGTAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517091 8 - 90481686 CCTGTAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750014 8 + 3010529 CCTGTAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864145 8 + 163208435 CCTGTAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336335 8 - 74971481 CGTGTAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045636 8 - 78541002 CGTGTAAT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20766326 8 + 43916225 CGTGTAAT i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6751791 8 - 7209941 CGTGTAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494519 8 + 3907144 CGTGTAAT i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80441998 891 + 88915250 I e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e chlSab2.chr5 58202908 327 + 75399963 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=227517.000000 s hg38.chr16_GL383557v1_alt 24264 54 + 89672 CTGATGTGTATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTGGAGGAGTAGA s panTro5.chr16 21450301 54 - 81586097 CTGATGTGTATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTGGAGGAGTAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517099 54 - 90481686 CTGATGTGTATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTGGAGGAGTAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750022 54 + 3010529 CTGATGTGTATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTGGAGGAGTAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864153 54 + 163208435 CTGATGTATATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTGGAGGAGCAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336343 54 - 74971481 ATGATGTATATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTTGAGGAGCAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21045644 54 - 78541002 ATGATGTATATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTTGAGGAGCAGA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20766334 54 + 43916225 CTGATGTATATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTTGAGGAGCAGA i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6751799 54 - 7209941 CTGATGTATATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTTGAGGAGCAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494527 54 + 3907144 CTGATGTATATTCCACCCTTCTA-GTGGAAGGATGGTACAGTCTTGAGGAGCAGA i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80442889 53 + 88915250 CTGATGTGACTGCTGTTTTGCTAGGTGCCAAGA--ACACAGTCTACAGAAGCAGA i canFam3.chr5 I 891 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e chlSab2.chr5 58202908 327 + 75399963 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=58344.000000 s hg38.chr16_GL383557v1_alt 24318 10 + 89672 ATGCCTGACA s panTro5.chr16 21450355 10 - 81586097 ATGCCTGACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517153 10 - 90481686 ATGCCTGACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750076 10 + 3010529 ATGCCTGACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864207 10 + 163208435 ATGCCTGACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336397 10 - 74971481 ATGCCTGACA i rheMac8.chr20 C 0 I 318 s macFas5.chr20 21045698 10 - 78541002 ATGCCTGACA i macFas5.chr20 C 0 I 318 s cerAty1.NW_011999143v1 20766388 10 + 43916225 ATGCCTGACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203235 10 + 75399963 atgcctggcc i chlSab2.chr5 I 327 C 0 s manLeu1.NW_012101698v1 6751853 10 - 7209941 ATGCCTGACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494581 10 + 3907144 ATGCCTGACA i colAng1.NW_012123265v1 C 0 I 314 s canFam3.chr5 80442942 10 + 88915250 ATGCCTGGCA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024407 387 - 26466322 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=26526.000000 s hg38.chr16_GL383557v1_alt 24328 4 + 89672 GAAA s panTro5.chr16 21450365 4 - 81586097 GAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517163 4 - 90481686 GAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750086 4 + 3010529 GAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864217 4 + 163208435 GAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336725 4 - 74971481 GAAA i rheMac8.chr20 I 318 C 0 s macFas5.chr20 21046026 4 - 78541002 GAAA i macFas5.chr20 I 318 C 0 s macNem1.NW_012011355v1 12024794 4 - 26466322 GAAA i macNem1.NW_012011355v1 I 387 C 0 s cerAty1.NW_011999143v1 20766398 4 + 43916225 GAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203245 4 + 75399963 GAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751863 4 - 7209941 GAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494905 4 + 3907144 GAAA i colAng1.NW_012123265v1 I 314 C 0 s canFam3.chr5 80442952 4 + 88915250 TAAA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13673295 777 + 13852661 I a score=11162.000000 s hg38.chr16_GL383557v1_alt 24332 2 + 89672 AA s panTro5.chr16 21450369 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517167 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750090 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864221 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336729 2 - 74971481 AG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046030 2 - 78541002 AG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024798 2 - 26466322 AG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766402 2 + 43916225 AA i cerAty1.NW_011999143v1 C 0 I 318 s chlSab2.chr5 58203249 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6751867 2 - 7209941 AA i manLeu1.NW_012101698v1 C 0 I 318 s colAng1.NW_012123265v1 494909 2 + 3907144 AA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674072 2 + 13852661 AG i otoGar3.GL873566 I 777 C 0 s canFam3.chr5 80442956 2 + 88915250 AA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=224119.000000 s hg38.chr16_GL383557v1_alt 24334 35 + 89672 TAATTTCATACTAGCGTGCTGATGCTAAGAAATAG s panTro5.chr16 21450371 35 - 81586097 TAATTTCATACTAGCATGCTGATGCTAAGAAATAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517169 35 - 90481686 TAATTTCATACTAGCATGCTGATGCTAAGAAATAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750092 35 + 3010529 TAATTTCATACTAGCGTGCTGATGCTAAGAAATAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864223 35 + 163208435 TAATTTCATACTAGCGTGCCGATGCTAAGAAATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336731 35 - 74971481 TAATTTCATACTAGCACACTGATGCTAAGAAATAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046032 35 - 78541002 TAATTTCATACTAGCACACTGATGCTAAGAAATAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024800 35 - 26466322 TAATTTCATACTAGCACACTGATGCTAAGAAATAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766722 35 + 43916225 TAATTTCATACTAGCACACTGATGCTAAGAAATAA i cerAty1.NW_011999143v1 I 318 C 0 s chlSab2.chr5 58203251 35 + 75399963 TAATTTCATACTAGCACATTGATGCTAAGAAATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752187 35 - 7209941 TAATTTCATACTAGCACACTGATGCTAAGAAATAA i manLeu1.NW_012101698v1 I 318 C 0 s colAng1.NW_012123265v1 494911 35 + 3907144 TAATTTCATACTAGCGCACTGATGCTAAGAAATAG i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674074 30 + 13852661 TAATTTCATGCCAGTGTGTTAATG---AGGTAC-- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80442958 35 + 88915250 TAATTTCATACCAGTGTGTTAAAGCTAACAGAGAA i canFam3.chr5 C 0 I 1 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2921331 909 + 9850184 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=7085.000000 s hg38.chr16_GL383557v1_alt 24369 1 + 89672 G s panTro5.chr16 21450406 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517204 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750127 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864258 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336766 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046067 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024835 1 - 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766757 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203286 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752222 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494946 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2922240 1 + 9850184 G i proCoq1.NW_012152729v1 I 909 C 0 s otoGar3.GL873566 13674104 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80442994 1 + 88915250 A i canFam3.chr5 I 1 C 0 e micMur3.chr20 54910682 671 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=158927.000000 s hg38.chr16_GL383557v1_alt 24370 18 + 89672 TATTACA-TTTCTGTAAAA s panTro5.chr16 21450407 18 - 81586097 TATTACA-TTTCTGTAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517205 18 - 90481686 TATTACA-TTTCTGTAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750128 18 + 3010529 TATTAAA-TTTCTGTAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864259 18 + 163208435 TATTAAA-TTTCTGTAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336767 18 - 74971481 TATTAAA-TTTCTGTAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046068 18 - 78541002 TATTAAA-TTTCTGTAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024836 18 - 26466322 TATTAAA-TTTCTGTAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766758 18 + 43916225 TATTAAA-TTTCGGTAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203287 18 + 75399963 TATTAAA-TTTCTGTAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752223 18 - 7209941 TATTAAA-TTTCGGTAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494947 18 + 3907144 TATTAAA-TTTCTGTAAAA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911353 18 + 72247402 TATTATA-TTTTTGCAAAA i micMur3.chr20 I 671 C 0 s proCoq1.NW_012152729v1 2922241 18 + 9850184 TATTAAA-TTTTTGCAAAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13674105 18 + 13852661 TATTACA-TTTTTGCAAAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80442995 19 + 88915250 CATTAAACTTTTTGCAAAG i canFam3.chr5 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e dasNov3.JH569970 902921 407 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=123047.000000 s hg38.chr16_GL383557v1_alt 24388 11 + 89672 GAAATTGATTC s panTro5.chr16 21450425 11 - 81586097 GAAATTGATTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517223 11 - 90481686 GAAATTGATTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750146 11 + 3010529 GAAATTGAGTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864277 11 + 163208435 GAAATTGATTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336785 11 - 74971481 GAAATTGATTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046086 11 - 78541002 GAAATTGATTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024854 11 - 26466322 GAAATTGATTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766776 11 + 43916225 GAAATTGATTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203305 11 + 75399963 GAAATTGATTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752241 11 - 7209941 GAAATTGATTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494965 11 + 3907144 GAAATTGATTC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911371 11 + 72247402 GAAATTGATTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2922259 11 + 9850184 GAAATTGATTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13674123 11 + 13852661 GAAATTAATTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443014 11 + 88915250 GAAGTTGATTC i canFam3.chr5 C 0 I 201 s dasNov3.JH569970 903328 11 + 1009443 gggATTGATTC i dasNov3.JH569970 I 407 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=810753.000000 s hg38.chr16_GL383557v1_alt 24399 80 + 89672 CCCATTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTAAGCAAATGTGCTTGACAACAATGGCCAACAC s panTro5.chr16 21450436 80 - 81586097 CCCATTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517234 80 - 90481686 CCCATTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750157 80 + 3010529 CCCATTTTGTCAAAATACGCCTAATATCCAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAACGGCCAACAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864288 80 + 163208435 CCCACTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336796 80 - 74971481 CCCACTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046097 80 - 78541002 CCCACTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024865 80 - 26466322 CCCACTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766787 80 + 43916225 CCCACTTTGTCAAAATACGTCTAATATTTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203316 80 + 75399963 CCCATTTTGTCAAAATATGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAATAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752252 80 - 7209941 CCCACTTTGTCAAAATACGCCTAATATCTAAATTCCTAAACTCACTGTGAGCAAATGTGCTTGACAACAATGGCCAACAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 494976 80 + 3907144 CCCACTTTGTCAAAATACGCCTAATATCTAAATTTCTAAACTCACTGTGAGCAAACGTGCTTGACAACAATGGCCAACAC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911382 80 + 72247402 CCCACCTTGTCAAAATATGCCTAACATCTAAATTCCTAAATTCACTGTGAGTAAAGGTGGTTGATGACAATGGCCAACAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2922270 80 + 9850184 CCCACATTGTCAAAATATGCCTAACATCTAAATTCCTAAATTCGCTGTGAGTAAAGGTGTTTGATGACAATGGCCAAGAC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13674134 80 + 13852661 CTCACCTTGTCAAAATATGCCTAACATCTTAATTCCTAAATTCACTGTGAGTAAAGGTGTTCAATGACAATGGTCAATAC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443226 71 + 88915250 CTTATCTTGTCAAAATATTCCAAACATCTAAA---------TCATTATGAGTAAATTTCCTTGACAACAATGGCCAACGC i canFam3.chr5 I 201 C 0 s dasNov3.JH569970 903339 70 + 1009443 CCCACTTTGTCAAAATATACCTAATACCTATTTTGC------AATTGTGAGTGAAT-TGTTT---AATAATGGCCAACAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=60495.000000 s hg38.chr16_GL383557v1_alt 24479 6 + 89672 AAATAA s panTro5.chr16 21450516 6 - 81586097 AAATAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517314 6 - 90481686 AAATAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750237 6 + 3010529 AAATAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864368 6 + 163208435 AAATAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336876 6 - 74971481 AAATAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046177 6 - 78541002 AAATAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12024945 6 - 26466322 AAATAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766867 6 + 43916225 AAATAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203396 6 + 75399963 AAATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752332 6 - 7209941 AAATAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 495056 6 + 3907144 AAATAA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911462 6 + 72247402 AAATAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2922350 6 + 9850184 AAATAA i proCoq1.NW_012152729v1 C 0 I 18 s otoGar3.GL873566 13674214 5 + 13852661 -AATAA i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 903409 6 + 1009443 ATATAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443297 0 + 88915250 C e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=29456.000000 s hg38.chr16_GL383557v1_alt 24485 5 + 89672 GT---ATA----- s panTro5.chr16 21450522 5 - 81586097 GT---ATA----- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517320 5 - 90481686 GT---ATA----- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750243 5 + 3010529 GT---ATA----- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864374 8 + 163208435 GTATAATA----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336882 5 - 74971481 GT---ATA----- i rheMac8.chr20 C 0 I 45 s macFas5.chr20 21046183 5 - 78541002 GT---ATA----- i macFas5.chr20 C 0 I 11 s macNem1.NW_012011355v1 12024951 5 - 26466322 GT---ATA----- i macNem1.NW_012011355v1 C 0 I 45 s cerAty1.NW_011999143v1 20766873 5 + 43916225 GT---ATA----- i cerAty1.NW_011999143v1 C 0 I 45 s chlSab2.chr5 58203402 5 + 75399963 GT---ATA----- i chlSab2.chr5 C 0 I 45 s manLeu1.NW_012101698v1 6752338 5 - 7209941 GT---ATA----- i manLeu1.NW_012101698v1 C 0 I 45 s colAng1.NW_012123265v1 495062 5 + 3907144 GT---ATA----- i colAng1.NW_012123265v1 C 0 I 3 s micMur3.chr20 54911468 5 + 72247402 GT---ATA----- i micMur3.chr20 C 0 I 19 s otoGar3.GL873566 13674219 5 + 13852661 GT---ATT----- i otoGar3.GL873566 C 0 I 5 s dasNov3.JH569970 903415 10 + 1009443 GT---ACATAATA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443297 0 + 88915250 C e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=34199.000000 s hg38.chr16_GL383557v1_alt 24490 14 + 89672 TTTATGTTAAAAAT s panTro5.chr16 21450527 14 - 81586097 TTTATGTTAAAAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517325 14 - 90481686 TTTATGTTAAAAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750248 14 + 3010529 TTTATGTTAAAAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864382 14 + 163208435 TTTATGTTAAAAAC i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21046199 14 - 78541002 TTTGTGTTAAAAAT i macFas5.chr20 I 11 C 0 s colAng1.NW_012123265v1 495070 14 + 3907144 TTTGTGTTAAAAAT i colAng1.NW_012123265v1 I 3 C 0 s otoGar3.GL873566 13674229 11 + 13852661 TTTATGT---AAAT i otoGar3.GL873566 I 5 C 0 s dasNov3.JH569970 903425 14 + 1009443 TTTATGTAAATAAT i dasNov3.JH569970 C 0 I 1 e canFam3.chr5 80443297 0 + 88915250 C e micMur3.chr20 54911473 19 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=5650.000000 s hg38.chr16_GL383557v1_alt 24504 3 + 89672 GTC s panTro5.chr16 21450541 3 - 81586097 GTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517339 3 - 90481686 GTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750262 3 + 3010529 GTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864396 3 + 163208435 GTT i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21046213 3 - 78541002 GTC i macFas5.chr20 C 0 C 0 s colAng1.NW_012123265v1 495084 3 + 3907144 GTC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674240 3 + 13852661 ATT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80443297 0 + 88915250 C e micMur3.chr20 54911473 19 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e dasNov3.JH569970 903439 1 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=17014.000000 s hg38.chr16_GL383557v1_alt 24507 9 + 89672 CCCCTCctt s panTro5.chr16 21450544 9 - 81586097 CCCCTCctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517342 9 - 90481686 CCCCTCctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750265 9 + 3010529 CCCCTCctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864399 9 + 163208435 CCCCTCctt i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21046216 9 - 78541002 CCCCTCTTT i macFas5.chr20 C 0 I 8 s colAng1.NW_012123265v1 495087 9 + 3907144 CCCCTCTtt i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80443297 0 + 88915250 C e micMur3.chr20 54911473 19 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e dasNov3.JH569970 903439 1 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674243 0 + 13852661 C a score=360477.000000 s hg38.chr16_GL383557v1_alt 24516 285 + 89672 tgggaggccgaggcaggcggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctactaaaaatac-aaaaaattagctgggtgtggtggcacgcatctgtagtcctagctactcaagaggctgcggcaggagaatcgcttgaacccgggagatggaggttgcggtgagctgagatcgtgccactgcactccagcctgggcgacagagggagattctgtctcaa--------------aaaaaaaaaGTCTCTGTCTTCCCAGTAATAGCATGGATCTA s panTro5.chr16 21450553 285 - 81586097 tgggaggccgaggcaggcggatcacgaggtcaggagattgagaccatcgtggctaacacggtgaaaccccatctctactaaaaatac-aaaaaattagctgggtgtggtggcacgcatctgtagtcctagctactcaagaggctgcggcaggagaatcgcttgaacccgggaggtggaggttgcggtgagctgagatcgcgccactgcactccagcctgggcgacagagggagattctgtctcaa--------------aaaaaaaaaGTCTCCGTCTTCCCAGTAATAGCATGGATCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517351 285 - 90481686 tgggaggccgaggcaggcggatcacgaggtcaggagattgagaccatcgtggctaacacggtgaaaccccatctctactaaaaatac-aaaaaattagctgggtgtggtggcacgcatctgtagtcctagctactcaagaggctgcggcaggagaatcgcttgaacccgggaggtggaggttgcggtgagctgagatcgcgccactgcactccagcctgggcgacagagggagattctgtctcaa--------------aaaaaaaaaGTCTCCGTCTTCCCAGTAATAGCATGGATCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750274 285 + 3010529 tgggaggccgaggcagccggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctactaaaaatac-aaaaaattagctgggtgtggtggcacgcatctgtagtcccagctactcaagaggctgcggcaggagaatcgcttgaacccgggaggtggaggttgcggtgagctgagatcgcgccactgcactccagcctgggcgacagagggagattctgtctcaa--------------aaaaaaaaaGTCCCCGTCTTCCCAGTAATAGCATGGATCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864408 283 + 163208435 tgggagactgaggcaggtggatcacgaggtcaggagattgagaccatcctggctaacgtggtgaaaccccgtctctactaaaaatacaaaaaaattagctgggcgtagtggcacacatctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggagacggaggttgcggtgagctgagatcgtgccactgagctccagcctgggcgacagagggagattccgtctc-----------------aaaaaaaaGTCCCCATCTTCCCAGTAATAGCATGGATCTA i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495096 299 + 3907144 tgggaggccgaggcgggtggatcaccaggtcaagagatcgagaccactccggctaacacagtgaaaccttgtctctactaaaaatac-aaaaaatgagttgggcatggtggtacgcatctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaatccgggagacaggcgttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagggagattctgtctcaaaaaataataataataaaaataaaGTCCCCCTCTTCCCAGTAATAGCATGGATCTA i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80443297 0 + 88915250 C e micMur3.chr20 54911473 19 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e dasNov3.JH569970 903439 1 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674243 0 + 13852661 C a score=32733.000000 s hg38.chr16_GL383557v1_alt 24801 21 + 89672 AAATAAAACATTTTTTAAAAG s panTro5.chr16 21450838 21 - 81586097 AAATAAAACATTTTTTAAAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517636 21 - 90481686 AAATAAAACATTTTTTAAAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750559 21 + 3010529 AAATAAAACATTTTTTAAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864691 21 + 163208435 AAATAAAACATTTTTTAAAAG i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495395 21 + 3907144 AAATAAAACATTTTTTAAAAG i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80443297 21 + 88915250 AAATACAATATTTACGCAAAT i canFam3.chr5 C 0 I 4 e micMur3.chr20 54911473 19 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e dasNov3.JH569970 903439 1 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674243 0 + 13852661 C a score=6876.000000 s hg38.chr16_GL383557v1_alt 24822 2 + 89672 TC s panTro5.chr16 21450859 2 - 81586097 TC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517657 2 - 90481686 TC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750580 2 + 3010529 TC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864712 2 + 163208435 TC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495416 2 + 3907144 TC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674243 2 + 13852661 TC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443322 2 + 88915250 TC i canFam3.chr5 I 4 C 0 s dasNov3.JH569970 903440 2 + 1009443 TC i dasNov3.JH569970 I 1 C 0 e micMur3.chr20 54911473 19 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922356 18 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=186048.000000 s hg38.chr16_GL383557v1_alt 24824 45 + 89672 CCCCTTTCTCCTGATTTTTCACACTAA------AAAGT-------GGAAGGAATTATT s panTro5.chr16 21450861 45 - 81586097 CCCCTTTCTCCTGATTTTTCACACTAA------AAAGT-------GGAAGGAATTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517659 45 - 90481686 CCCCTTTCTCCTGATTTTTCACACTAA------AAAGT-------GGAAGGAATTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750582 45 + 3010529 CCCCTTTCTCCTGATTTTTCACACTAA------AAAGT-------GGAAGGAATTATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864714 45 + 163208435 CCCCTTTCTCCTAATTTTTCACACTAA------AAAGT-------GGAAGGAATTATT i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495418 45 + 3907144 CCCCTTTCTCCTGATTTTTCACACTAA------AAAGT-------GGGAGGAATTATT i colAng1.NW_012123265v1 C 0 I 308 s micMur3.chr20 54911492 45 + 72247402 CCCCTTTCTCTTAATTTTTCACACTAA------AAAGT-------AGAAGGAATTATT i micMur3.chr20 I 19 C 0 s proCoq1.NW_012152729v1 2922374 45 + 9850184 CCCCTTTCTCCTGATTTTTCACACTAA------AAAGT-------AAAAGGAATTATT i proCoq1.NW_012152729v1 I 18 C 0 s otoGar3.GL873566 13674245 45 + 13852661 CCCCTTTCTCCTGATTTTTCACATTAA------AAAGT-------GGGAAGAATTATG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443324 52 + 88915250 CCCCTTTCTCTTAATTTTTCAGACTAA------AAAGGGTAAAGAGAAAGGATTCACT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 903442 51 + 1009443 CCCCTTTCTCCTCATTTTTCACATTAAATGAGTAAGGA-------AGAGGGAATTGTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=67246.000000 s hg38.chr16_GL383557v1_alt 24869 16 + 89672 TGGCATCTAAGTCTTA s panTro5.chr16 21450906 16 - 81586097 TGGCATCTAAGTCTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517704 16 - 90481686 TGGCATCTAAGTCTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750627 16 + 3010529 TGGCATCTAAGTCTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864759 16 + 163208435 TGGCATCTAAGTCTTA i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495771 16 + 3907144 TGGCATCTAAGTCTTA i colAng1.NW_012123265v1 I 308 C 0 s micMur3.chr20 54911537 16 + 72247402 TGACATCTAAGTCCTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2922419 16 + 9850184 TGGCATCTAAGTCCTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13674290 16 + 13852661 TGGCATCCACGTGTTG i otoGar3.GL873566 C 0 I 7 s canFam3.chr5 80443376 16 + 88915250 TGGCATCTAAGTCCTA i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 903493 16 + 1009443 TGGCATCTAACTCCTG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=5977.000000 s hg38.chr16_GL383557v1_alt 24885 3 + 89672 AAC s panTro5.chr16 21450922 3 - 81586097 AAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517720 3 - 90481686 AAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750643 3 + 3010529 AAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864775 3 + 163208435 AAC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495787 3 + 3907144 AAC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911553 3 + 72247402 GAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2922435 3 + 9850184 GAC i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80443393 2 + 88915250 AA- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 903509 3 + 1009443 AAC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674306 7 + 13852661 I a score=21355.000000 s hg38.chr16_GL383557v1_alt 24888 5 + 89672 TTTGG s panTro5.chr16 21450925 5 - 81586097 TTTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517723 5 - 90481686 TTTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750646 5 + 3010529 TTTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864778 5 + 163208435 TTTGG i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495790 5 + 3907144 TTTGT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911556 5 + 72247402 TTTGg i micMur3.chr20 C 0 I 353 s proCoq1.NW_012152729v1 2922438 5 + 9850184 TTTGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13674313 4 + 13852661 -TTGG i otoGar3.GL873566 I 7 I 1 s canFam3.chr5 80443395 5 + 88915250 TTTGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 903512 5 + 1009443 TTTAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=22904.000000 s hg38.chr16_GL383557v1_alt 24893 10 + 89672 CCTTTTTTTT s panTro5.chr16 21450930 10 - 81586097 CCTTTCTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517728 10 - 90481686 CCTTTCTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750651 10 + 3010529 CCTTTCTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864783 10 + 163208435 CCTTTCTTTT i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495795 10 + 3907144 CCTTTCTTTT i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2922443 9 + 9850184 AATTTCTTT- i proCoq1.NW_012152729v1 C 0 I 1 s otoGar3.GL873566 13674318 9 + 13852661 CATTTCTTT- i otoGar3.GL873566 I 1 I 1 s canFam3.chr5 80443400 10 + 88915250 CCTTTCTTTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 903517 10 + 1009443 CCTTTCTGTG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54911561 353 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=219024.000000 s hg38.chr16_GL383557v1_alt 24903 59 + 89672 CAATTTTCATTAAGATTGCAAATCTTCATTATGAGAGTCTTGCCC--ATTCACTAAAGAAC s panTro5.chr16 21450940 59 - 81586097 CAATTTTCATTAAGATTGCAAATCTTCATTATGAGAGTCTCGCCC--ATTCACTAAAGAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517738 59 - 90481686 TAATTTTCATTAAGATTGCAAATCTTCATTATGAGAGTCTCGCCC--ATTCACTAAAGAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750661 59 + 3010529 CAATTTTCATTAAGATTGCAAATCTTCATTATGAGAGTCTTGCCC--ATTCACTAAAGAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864793 59 + 163208435 CAATATTCATTAAGATTGCAAATCTTCATTATGAGAGTCTTGCCC--ATTCACTAAAGAAC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495805 59 + 3907144 CAATATTCATTAAGATTGCAAATCTTCATTATGAGAATCTTGCCC--ATTCACTAAAGAAC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911914 61 + 72247402 CAATATTCACTAAGATGGCAAATCTTCATTGTTAGAGTCTTGCCCTCATTCACTAAAGAAC i micMur3.chr20 I 353 I 16 s proCoq1.NW_012152729v1 2922453 61 + 9850184 CAATATTCACTAAGATTGCAAATCGTCACCGTGAGAGTCTTGCCCTAATTCACTGAAGAAC i proCoq1.NW_012152729v1 I 1 I 13 s otoGar3.GL873566 13674328 61 + 13852661 TAACAGTCACTAAGATTGTAAATCTTCTTTGTGAGAGTCTTGCCCTCATTCACTACAGAAC i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80443410 41 + 88915250 CAATATTCATTAAG-------------------AGAGTCTTGCCT-CATTCACTAAAGAAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 903527 59 + 1009443 CAATATTCATTAAGATTGCAAATCTTCATTGT--GAGTCTTGCCCGAATTCACTAAAGAAC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=17453.000000 s hg38.chr16_GL383557v1_alt 24962 7 + 89672 AAATGAA s panTro5.chr16 21450999 7 - 81586097 AAATGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517797 7 - 90481686 AAATGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750720 7 + 3010529 AAATGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864852 7 + 163208435 AAATGAA i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495864 7 + 3907144 AAATGAA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674389 6 + 13852661 -AATGTA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443451 6 + 88915250 -AATGAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 903586 6 + 1009443 -AATGAA i dasNov3.JH569970 C 0 I 445 e micMur3.chr20 54911975 16 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922514 13 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=4867.000000 s hg38.chr16_GL383557v1_alt 24969 3 + 89672 GAC s panTro5.chr16 21451006 3 - 81586097 GAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517804 3 - 90481686 GAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750727 3 + 3010529 GAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864859 3 + 163208435 GAC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495871 3 + 3907144 GAT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674395 3 + 13852661 GAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443457 3 + 88915250 AAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904037 3 + 1009443 GAA i dasNov3.JH569970 I 445 C 0 e micMur3.chr20 54911975 16 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922514 13 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=6490.000000 s hg38.chr16_GL383557v1_alt 24972 2 + 89672 AC s panTro5.chr16 21451009 2 - 81586097 AC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517807 2 - 90481686 AC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750730 2 + 3010529 AC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864862 2 + 163208435 AC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495874 2 + 3907144 AC i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2922527 2 + 9850184 AC i proCoq1.NW_012152729v1 I 13 C 0 s otoGar3.GL873566 13674398 2 + 13852661 AT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443460 2 + 88915250 AC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904040 2 + 1009443 AT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54911975 16 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=251788.000000 s hg38.chr16_GL383557v1_alt 24974 65 + 89672 CTCAAGGTACACAATAATCAGTGACAAAATTAACTGCAATCTAGATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT s panTro5.chr16 21451011 64 - 81586097 CTCAAGGTACACAATAATCA-TGACAAAATTAACTGCAATCTAGATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517809 64 - 90481686 CTCAAGGTACACAATAATCA-TGACAAAATTAACTGCAATCTAGATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750732 65 + 3010529 CTCAAGGTACACAATAATCAGTGACAAAATTAACTGCAATCTAGATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864864 65 + 163208435 CTCAAGGTACACAATAATCAGTGACAAAATTAACTGCAATCTATATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495876 65 + 3907144 CTCAAGGTACACAATAATCAGTGACAAAATGAACTGCAATCTAGATTGCTTAATAT-----------------------------------------------------------------------TTCTCTCTT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54911991 65 + 72247402 CTCAAGGTACACAACAATCAGTGACAAAATTAATTGCAATCCAGATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT i micMur3.chr20 I 16 I 33 s proCoq1.NW_012152729v1 2922529 65 + 9850184 CTCAAGGTACACAATAATCAGTGACAAAATTAATTGCAATCTAGATTGCTCAATAT-----------------------------------------------------------------------TTCTCTCTT i proCoq1.NW_012152729v1 C 0 I 621 s otoGar3.GL873566 13674400 136 + 13852661 CTCAAGATACACAATAATCAGTGACAAAGTTAAATGCAATCTAGATCGTTCACTACAGAACAATGTAGAAATCTCAAGATACACAATAATCAGTGACAAAATTAAATGTAATCTAGATCGTTCGGTATTCTCTCTC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443462 65 + 88915250 CTCAAGTTACACAATAACCAGTGGCAAAATTAACTGCAATCTAGATCACTCAATAT-----------------------------------------------------------------------TCCTTCTTC i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 904042 65 + 1009443 CTCAAGTTACACAGAAATGAGTGGCAAAACTAACTGCAATCTAGATAACTTAATAT-----------------------------------------------------------------------TTCTCTCCT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=48796.000000 s hg38.chr16_GL383557v1_alt 25039 32 + 89672 TGCTAAGTGATTCATCTGCGCTTAAGAGAAAA s panTro5.chr16 21451075 32 - 81586097 TGCTAAGTGATTCATCTGTGCTTAAGACAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517873 32 - 90481686 TGCTAAGTGATTCATCTGTGCTTAAGACAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750797 32 + 3010529 TGCTAAGTGATTCATCTGTGCTTAAGAGAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864929 32 + 163208435 TGCTAAGTGATTCATCTGTGCTTAAGAGGAAA i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495941 32 + 3907144 GGCTAAGTGATTCATCTGTGCTTAAGAGAAAA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674536 31 + 13852661 CCCTTCATGATTTGTCCATGCTT-AGAGAAGA i otoGar3.GL873566 C 0 I 4 s canFam3.chr5 80443529 27 + 88915250 CCCTAAGTGATTCTTTTCT-CTTAAAAA---- i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 904107 27 + 1009443 TCCTCAA----TCTTTTCTACTT-AGAGAAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54912056 33 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=5348.000000 s hg38.chr16_GL383557v1_alt 25071 2 + 89672 AG s panTro5.chr16 21451107 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517905 2 - 90481686 AG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750829 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864961 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495973 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80443556 2 + 88915250 AG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904134 2 + 1009443 AG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54912056 33 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674567 4 + 13852661 I a score=-2152.000000 s hg38.chr16_GL383557v1_alt 25073 8 + 89672 ATCGCC-----------------tt s panTro5.chr16 21451109 25 - 81586097 ATCGCCttttttttttttttttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517907 6 - 90481686 ATCGCt------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750831 10 + 3010529 ATCGCC---------------tttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864963 9 + 163208435 ATCAAC----------------ttt i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495975 8 + 3907144 ATCACC-----------------TC i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80443558 8 + 88915250 ACAGCT-----------------TT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54912056 33 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904136 0 + 1009443 C e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674567 4 + 13852661 I a score=212607.000000 s hg38.chr16_GL383557v1_alt 25081 165 + 89672 ttttttttttttttgaggcagtgtttcactctgttgtccagacctggagtgcagtggtgcaatcatggctcaccaaagcgtccacctcccaggctcaagtgatcctcccacctcaacctcccaactagctgggactacaggcgtgagccactgcgccaggccaaC s panTro5.chr16 21451134 165 - 81586097 ttttttttttttttgaggcagtgtttcactctgttgcccagacctggagtgcagtggtgcaatcatggctcaccaaagcgtccacctcccaggctcaagtgatcctcccacctcaacctcccaactagctgggattacaggcgtgagccactgtgccaggccaaC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21517913 163 - 90481686 --ttttttttttttgaggcagtgtttcactctgttgcccagacctggagtgcagtggtgcaatcatggctcaccaaagcgtccacctcccaggctcaagtgatcctcccacctcaacctcccaactagctgggattacaggcgtgagccactgtgccaggccaaC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 750841 165 + 3010529 ttttttttttttttgaggcagcgtttcactctgttgcccagacctggagtgcagtggtgcaatcatggctcaccaaagcgtccacctcccaggctcaagtgatcctcccacctcaacctcccaactagctgggactacaggcgtgagccactgcgccaggccaaC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53864972 164 + 163208435 ttttttttttttttgagacagcttttcact-tgttgcccagatctggagtccagtggtgcaatcatggctcaccaaagcacccacctcccaggctcaagtgatcctcctacctcagcctcccaactagctgggactacaggcgtgagccactgcaccaggccaaC i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 495983 164 + 3907144 Ctttttttttttttgagacag-gggtcactctgttgcccagacctgaagtgcagtggtgcaatcatggctcaccaaagcgtccacctctcaggctcaagtgatccttctacctcatcctcctaactagctgggactacgggcgtgagccactgcgccgggccaaC i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80443566 0 + 88915250 C e micMur3.chr20 54912056 33 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904136 0 + 1009443 C e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674567 4 + 13852661 I a score=15102.000000 s hg38.chr16_GL383557v1_alt 25246 7 + 89672 ATCGCTT s panTro5.chr16 21451299 7 - 81586097 ATCGCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518076 7 - 90481686 ATCGCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751006 7 + 3010529 ATCGCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865136 7 + 163208435 ATCGATT i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496147 7 + 3907144 ATCACTT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912089 7 + 72247402 ATCACTT i micMur3.chr20 I 33 C 0 s dasNov3.JH569970 904136 7 + 1009443 ATCACTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443566 0 + 88915250 C e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674567 4 + 13852661 I a score=6552.000000 s hg38.chr16_GL383557v1_alt 25253 2 + 89672 TA s panTro5.chr16 21451306 2 - 81586097 TA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518083 2 - 90481686 TA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751013 2 + 3010529 TA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865143 2 + 163208435 TA i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496154 2 + 3907144 TA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912096 2 + 72247402 TA i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13674571 2 + 13852661 TA i otoGar3.GL873566 I 4 C 0 s dasNov3.JH569970 904143 2 + 1009443 TA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443566 0 + 88915250 C e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=507388.000000 s hg38.chr16_GL383557v1_alt 25255 174 + 89672 ATTAATGCTGCCTGTGTAGATTTGAAGGCGATTAGCTGCTAGTTAAAATGAAAGGTGGAAGagcaaaagccgatttatctgc------aaatctac-----aacataaaata-ttttatctggca---cttc----acatctttagc---acaacaaatgaagctcacaataaggtattgtaaatcttgaggttcc s panTro5.chr16 21451308 174 - 81586097 ATTAATGCTGCCTGTGTCGATTTGAAGGCGATTAGCTGCTAGTTAAAATGAAAGGTGGAAGagcaaaagccgatttatctgc------aaatctac-----aacataaaata-ttttatctggca---cttc----acatcttcagc---acaataaatgaagctcacaataaggtattgtaaatcttgaggttcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518085 174 - 90481686 ATTAATGCTGCCTGTGTCGATTTGAAGGCGATTAGCTGCTAGTTAAAATGAAAGGTGGAAGagcaaaagccgatttatctgc------aaatctac-----aacataaaata-ttttatctggca---cttc----acatcttcagc---acaataaatgaagctcacaataaggtaatgtaaatcttgaggttcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751015 177 + 3010529 ATTAATGCTGCCTGTGTCGATTTGAAGGCGATTAGCTGCTAGTTAAAATGAAAGGTGGAAGagcaaaagccgatttatctgc------aaatctac-----aacataaaaca-ttttatctggcacttcttc----acatctttagc---acaataaatgaagctcacaataaggtattgtaaatcttgaggtttc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865145 178 + 163208435 ATGAATGCTGCCTGTGTCGATTTGAAGGAGATTAGCTGCTAGTTAAAATGAAAGGTGGAAGagcaaaagccgatttatctgc------aaatctac-----aacataaaatatttttatctggcacttctcc----acatctttagc---ccaataaatgaagctcacaataaggtattgtaaatcttgaggttcc i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496156 177 + 3907144 ATAAATGTTGCCTGTGTTGATTTGAAGGCACTTAGCTGCTAGTTAAAATGAAAGGTGGAAGagcaaaaaccaatttatctgc------aaatctac-----aacataaaata-ttttatctggcacttctcc----acagctttagc---acaataaatgaagctcacaataaggtatcagaaatcttgaggttcc i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912098 181 + 72247402 ATAAATTCTGCCTGTGTTGATCTGAAGGAGATTAGTTGCTAGTTATGTTGAAATATGGA-----aaaaaccgatttatctgc------aaatctattacacaacataaaatc-ttttatctgaca---cttctagtgcatctttatcacaacaataaatgaagttcacaataaggtattgcaaatcctgaggttcc i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13674573 181 + 13852661 ATAAATGCTGCCTGTGTTGATCTGAAGGAGATTAGTTGTTAGTTATGTTGAAAGACAGAAAagcaaaagctgatttgtctgg------aaacctat-----aatataaaatc-tttaatctggta---cttccagtacatctttatcacaacaataaataaagtttataataagatactgaaatactggagcttcc i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80443566 176 + 88915250 ATAAATGCTGTCTGTGTTGGTCTAAAGAAGATTAGTTACTAGTTATAATGAAAGATGGAAGagcaaaagctgatttatgtgc------aaatctac-----aacatacattc-tcttatctggcacttttat----gtatctccatc---acaac-aataaagttcacaataagatattacaaatcctgaggttcc i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904145 182 + 1009443 ATAAATGTTGCCTGTGTTGGTCTAAGGAAGATTAGTTGCTAGTTATAATGAAGCATAGTAGAGCAAAAGCTGATTTATGCAGAACATAAAATCTAG-----GAAATAAAATC-TTTT-Cctgatacttttgt----gcatctctagc---acaataaatgaaattcacaataaggtactgcatatcttgaggctcc i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=139552.000000 s hg38.chr16_GL383557v1_alt 25429 61 + 89672 atctgaatc-atcaaactaagattcaattatagctaaaatatttttagtgttaaaaatcatt s panTro5.chr16 21451482 62 - 81586097 atctgaatcaatcaaactaagattcaattatagctaaaatatttttagtgttaaaaatcatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518259 62 - 90481686 atctgaatcaatcaaactaagattcaattatagctaaaatatttttagtgttaaaaatcatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751192 60 + 3010529 atctgaatc-atcaaactaagattcaattatagctaaaata-ttttagtgttaaaaatcatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865323 61 + 163208435 atctgaatc-atcaaactaagattcaattatagctaaaatatttttagtgttaaaaatcatt i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496333 53 + 3907144 atctgaatc-atcaaactaagatttgattatagctaaaatatttttagt--------tcatt i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912279 54 + 72247402 atcttaatc--------aaagattcaattacatgtagaatatttttagtgttaaaaatcatt i micMur3.chr20 C 0 I 3 s otoGar3.GL873566 13674754 61 + 13852661 atatcaacc-atcaaagaaagattcaattatacttagaatatttttagtgttaaaaatcatt i otoGar3.GL873566 C 0 I 51 s canFam3.chr5 80443742 61 + 88915250 atctgaatg-atcaaaaagagattaaattacatttagaatatttttagtgttaaaaatattt i canFam3.chr5 C 0 I 2 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904327 0 + 1009443 C e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=10734.000000 s hg38.chr16_GL383557v1_alt 25490 6 + 89672 attata s panTro5.chr16 21451544 6 - 81586097 attata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518321 6 - 90481686 attata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751252 6 + 3010529 attata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865384 6 + 163208435 attaca i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496386 6 + 3907144 attata i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80443805 6 + 88915250 attata i canFam3.chr5 I 2 I 511 e micMur3.chr20 54912333 3 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904327 0 + 1009443 C e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674815 51 + 13852661 I a score=115651.000000 s hg38.chr16_GL383557v1_alt 25496 86 + 89672 ggccaggcgtggtggctcacgcctgtaatcccagcactttggcaggctaaggcgggtgaatcacctgaagtcaggagttcaagacc s panTro5.chr16 21451550 86 - 81586097 ggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctaaggcgggtgaatcacctgaagtcaggagttcaagacc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518327 86 - 90481686 ggccaggcgtggtggctcacgcctgtaatcccggcactttgggaggctaaggcgggtgaatcacctgaagtcaggagttcaagacc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751258 86 + 3010529 ggccaggcgtggtggttcacgcctgtaatcccagcactttgggaggctaaggcgggtgaatcacctgaagccaggagttcaagacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865390 86 + 163208435 agccaggcgcagtggctcacgcctgtaatcccagcactttgggaggctgaggtgggtgaatcacctgaagtcaggagttcaagacc i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496392 86 + 3907144 ggccaggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggtgggtgaatcccctgaagtcaggagttcaagacc i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80443811 511 + 88915250 I e micMur3.chr20 54912333 3 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904327 0 + 1009443 C e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674815 51 + 13852661 I a score=56460.000000 s hg38.chr16_GL383557v1_alt 25582 39 + 89672 tacctaaccaacacggagaaacccatctctactaaaaat s panTro5.chr16 21451636 39 - 81586097 tacctaaccaacatggagaaacccatctctactaaaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518413 39 - 90481686 tacctaaccaacatggagaaacccatctctactaaaaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751344 39 + 3010529 tacctaaccaacatggagaaacccatctctactaaaaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865476 39 + 163208435 tgcctaaccaacatggagaaacctgtctttactaaaaat i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496478 39 + 3907144 tgcctaaccaacatggagaaacccatctctactaaaaat i colAng1.NW_012123265v1 C 0 C 0 s dasNov3.JH569970 904327 39 + 1009443 cactcaatcatcagagaaagattccatcatatttaaaat i dasNov3.JH569970 C 0 I 12 e canFam3.chr5 80443811 511 + 88915250 I e micMur3.chr20 54912333 3 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674815 51 + 13852661 I a score=109216.000000 s hg38.chr16_GL383557v1_alt 25621 86 + 89672 acaaaattagctggacatggtggcgtgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgagcctgggagg s panTro5.chr16 21451675 86 - 81586097 acaaaattggctggacatggtggcatgcgcctgtaatcgcagctactcgggaggctgaggcaggagaatcacttgaacctgggagg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518452 86 - 90481686 acaaaattggctggacatggtggcgtgtgcctgtaatcgcagctactcgggaggctgaggcaggagaatcacttgaacctgggagg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751383 85 + 3010529 ac-aaattagctggacatggtggcatgcgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865515 86 + 163208435 acaaaattagctgggcgtggtggcatgcacctgtaatcccagctactcgggaggctgaggcaggagactcacttgaacctgggatg i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496517 86 + 3907144 acaaaattagctgggcgtggtggcgtgcacctgtaatcccagctactcgggagtttgaggcaggagaatcacttgaacctgggagg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80443811 511 + 88915250 I e micMur3.chr20 54912333 3 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904366 12 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13674815 51 + 13852661 I a score=80262.000000 s hg38.chr16_GL383557v1_alt 25707 79 + 89672 cagaggttgcagtgagccgagatcgtgccattgcactccagcccgagcaacaagagtgaaactgtctcaaaaaaaaaaa s panTro5.chr16 21451761 79 - 81586097 cagaggttgcagtgagccgagatcgtgccattgcactccagcccgagcaacaagagtgaaactgtctcaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518538 77 - 90481686 cagaggttgcagtgagccgagatcgtgccactgcactccagcccgagcaacaagagtgaaactgtct--acaaaaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751468 78 + 3010529 cagaggttgcagtgagccgagatcgtgccattgcactccagcccaagcaacaagagtgaaactgtctc-aaaaaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865601 79 + 163208435 cagaggttgcagtgagccaacattgtgccattgcactccagcctgagcaacaagagtgaaactgtttcaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496603 54 + 3907144 cagatgttgcagtg-------------------------agcctgggcaacaagagtgaaactgtctcaaaaaaaaaaa i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674866 45 + 13852661 cggaggtggcaa-----------------gttcaaacccagccccagccaaa-----------------aaccacaaaa i otoGar3.GL873566 I 51 C 0 e canFam3.chr5 80443811 511 + 88915250 I e micMur3.chr20 54912333 3 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e dasNov3.JH569970 904366 12 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=9601.000000 s hg38.chr16_GL383557v1_alt 25786 12 + 89672 aaaaaaaacatt-- s panTro5.chr16 21451840 12 - 81586097 aaaaaaatcatt-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518615 12 - 90481686 aaaaaaatcatt-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751546 12 + 3010529 aaaaaaatcatt-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865680 9 + 163208435 aaaaaa---att-- i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496657 5 + 3907144 aaaa-------c-- i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13674911 12 + 13852661 aaaaaaatcatt-- i otoGar3.GL873566 C 0 I 2 s dasNov3.JH569970 904378 12 + 1009443 --aaaaattatttc i dasNov3.JH569970 I 12 C 0 e canFam3.chr5 80443811 511 + 88915250 I e micMur3.chr20 54912333 3 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=9828.000000 s hg38.chr16_GL383557v1_alt 25798 3 + 89672 att s panTro5.chr16 21451852 3 - 81586097 att i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518627 3 - 90481686 att i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751558 3 + 3010529 att i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865689 3 + 163208435 att i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496662 3 + 3907144 att i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912336 3 + 72247402 att i micMur3.chr20 I 3 C 0 s otoGar3.GL873566 13674925 3 + 13852661 att i otoGar3.GL873566 I 2 C 0 s dasNov3.JH569970 904390 3 + 1009443 att i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443811 511 + 88915250 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2922594 621 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=14535.000000 s hg38.chr16_GL383557v1_alt 25801 4 + 89672 atat s panTro5.chr16 21451855 4 - 81586097 atat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518630 4 - 90481686 atat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751561 4 + 3010529 atat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865692 4 + 163208435 atat i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 496665 4 + 3907144 atat i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912339 4 + 72247402 atat i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2923215 4 + 9850184 atat i proCoq1.NW_012152729v1 I 621 C 0 s otoGar3.GL873566 13674928 4 + 13852661 atat i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 904393 4 + 1009443 agat i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443811 511 + 88915250 I e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 12024956 45 - 26466322 I e rheMac8.chr20 21336887 45 - 74971481 I e macFas5.chr20 21046225 8 - 78541002 I e manLeu1.NW_012101698v1 6752343 45 - 7209941 I e chlSab2.chr5 58203407 45 + 75399963 I e cerAty1.NW_011999143v1 20766878 45 + 43916225 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=698267.000000 s hg38.chr16_GL383557v1_alt 25805 74 + 89672 tctaaatctctgacaatccatgcatttgcgtacagtcagttcatatt------aactcttcattCT----CTATTTCATATTTA s panTro5.chr16 21451859 74 - 81586097 tctaaatctctgacaatccatgcatttacatacagtcagttcatatt------aacTCTTCATTCT----CTATTTCATATTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518634 74 - 90481686 tctaaatctctgacaatccatgcatttacatacagtcagttcatatt------aacTCTTCATTCT----CTATTTCATATTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751565 72 + 3010529 tctaaa--tctgacaatccatgcatttgtgtacagtcagttcatatt------aacTCTTCATTCT----CTATTTCATATTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865696 74 + 163208435 tctaaatctctgacaatccatgcatttgtgtacagtcagttcatatt------aactcttcattCT----CTATTTCATATTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21336932 74 - 74971481 TCTAAATCTCTGACAATCCATGCATTTGTGTACAGTCAGTTCATATT------AACTCTTCATTCT----CTATCTCATATTTA i rheMac8.chr20 I 45 C 0 s macFas5.chr20 21046233 74 - 78541002 TCTAAATCTCTGACAATCCATGCATTTGTGTACAGTCAGTTCATATT------AACTCTTCATTCT----CTATCTCATATTTA i macFas5.chr20 I 8 C 0 s macNem1.NW_012011355v1 12025001 74 - 26466322 TCTAAATCTCTGACAATCCATACATTTGTGTACAGTCAGTTCATATT------AACTCTTCATTCT----CTATCTCATATTTA i macNem1.NW_012011355v1 I 45 C 0 s cerAty1.NW_011999143v1 20766923 74 + 43916225 TCTAAATCTCTGACAATCCATGCATTTGTGTACAGTCAGTTCATATT------AACTCTTCATTCT----CTATCTCATATTTA i cerAty1.NW_011999143v1 I 45 C 0 s chlSab2.chr5 58203452 74 + 75399963 TCTAAATCTCTGACAATCCATGCATTTGTGTACAATCAGTTCATATT------AACTCTTCATTCT----CTATCTCATATTTA i chlSab2.chr5 I 45 C 0 s manLeu1.NW_012101698v1 6752388 74 - 7209941 TCTAAATCTCTGACAATCCATGCATTTGTGTACAGTCAGTTCATATT------AACTCTTCATTCT----CTATCTCATATTta i manLeu1.NW_012101698v1 I 45 C 0 s colAng1.NW_012123265v1 496669 74 + 3907144 tctaaatctctgacaatccatgtatttgtgtacagtcagttcatatt------aacTCTTCATTCT----CTATCTCACATTTA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912343 80 + 72247402 tctaaatctctgacaatccatgcatttgtatatagtcagtttatattaaccacaaCTCTTCATTCT----CTATCCCATATTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2923219 84 + 9850184 tcaaaatctctgacaatccatgcatttgtatatagtcagtttatattaacTGCAACTCTTCATTCTCTGACTATCCCACATTTC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13674932 80 + 13852661 tctaaacctctgacaacccatgcatttgtatatagtcagtttatattaattacaaCTCTTCATTCT----CTATCTTATAttta i otoGar3.GL873566 C 0 I 2168 s dasNov3.JH569970 904397 79 + 1009443 tccaattttctgacaatccatgaatttgtat-tagtgagtttatattaacGACAACTCTCCATTCT----CTATCCTACATTta i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443811 511 + 88915250 I e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I a score=231750.000000 s hg38.chr16_GL383557v1_alt 25879 26 + 89672 GAATTGTAAAATAT--GAGCTGGAAGGG s panTro5.chr16 21451933 26 - 81586097 GAATTGTAAAATAT--GAGCTGGAAGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518708 26 - 90481686 GAATTGTAAAATAT--GAGCTGGAAGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751637 26 + 3010529 GAATTGTAAAATAT--GAGCTGGAAGGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865770 26 + 163208435 GAATTGTAAAATAT--GAGCTGGAAGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337006 26 - 74971481 GAATTGTAAAATAT--GAGCTGGAAGGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046307 26 - 78541002 GAATTGTAAAATAT--GAGCTGGAAGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12025075 26 - 26466322 GAATTGTAAAATAT--GAGCTGGAAGGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20766997 26 + 43916225 GAATTGTAAAATAT--GAGCTGGAAGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203526 26 + 75399963 GAATTGTAAAATAT--GAGCTGGAAGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752462 26 - 7209941 gaattgtaaaatat--gagctggaaggg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 496743 26 + 3907144 GAACTGTAAAATAT--GAGCTGGAAGGG i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912423 26 + 72247402 GAATTCTAAAATAT--GAGCTGGAAGGA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2923303 26 + 9850184 AAATTATAAAATAT--GAGCTGGAAGGA i proCoq1.NW_012152729v1 C 0 C 0 s dasNov3.JH569970 904476 28 + 1009443 gaattacaaaatgttagggctggaagga i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80443811 511 + 88915250 I e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13675012 2168 + 13852661 I a score=1574522.000000 s hg38.chr16_GL383557v1_alt 25905 192 + 89672 ATCTTATTTTTAATAGGTAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCGAAATGTTTTGCTGTATTTTTTCC--------------------------------------------------------C-AAGAAAAATCAGGTAATTTTTGTA---ACTACATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCA s panTro5.chr16 21451959 192 - 81586097 ATCTTATTTTTAATAGGTAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCGAAATGTTTTGCTGTATTTTTTCC--------------------------------------------------------C-AAGAAAAATCAGGTAATTTTTGTA---ACTACATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518734 192 - 90481686 ATCTTATTTTTAATAGGTAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCGAAATGTTTTGCTGTATTTTTTCC--------------------------------------------------------C-AAGAAAAATCAGGTAATTTTTGTA---ACTACATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751663 197 + 3010529 ATCTTATTTTTAATAGGTAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCCAAGGAAGGTCACAC--AAAGTTAACAGCCATCCGAAATGTTTTGCTGTATTTTTTCC--------------------------------------------------------CAAAAAAAAATCAGGTAATTTTTGTA---ACTACATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865796 191 + 163208435 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC-----AGGTCACAC--ACAGTTAACAGCCATCCGAAATGTTTTGCTGTATTTTTTCC--------------------------------------------------------C-AAGAAAAATCAGGTAATTTTTGTA---ACTACATCCAGATGTTTGGAAATGTCTTAAAAATCTCAAAGATTTCTTTTCAGACCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337032 192 - 74971481 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCTGGTAATTTTTAAA---ACTAAATCCAGATGTTTGGAGATGTCTTAATAATCTCAAAGATTTCTTTTCAGACCCG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046333 192 - 78541002 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCAGGTAATTTTTAAA---ACTAAATCCAGATGTTTGGAGATGTCTTAATAATCTCAAAGATTTCTTTTCAGACCCG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 12025101 192 - 26466322 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCAGGTAATTTTTAAA---ACTAAATCCAGATGTTTGGAGATGTCTTAATAATCTCAAAGATTTCTTTTCAGACCCG i macNem1.NW_012011355v1 C 0 T 26287 s cerAty1.NW_011999143v1 20767023 192 + 43916225 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCTGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCAGGTAATTTTTTAA---ACTAAATCCAGACGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203552 192 + 75399963 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCAGAAATTATTTTTTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCAGGTAATTTTTTAA---ACTAAATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752488 192 - 7209941 atcttatttttaatagataagaaacatactgcttataatgctgaaattattttttgcc----aaggtcacac--acagttaacagcCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCAGGTAATTTTTTAA---ACTAAATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 496769 192 + 3907144 ATCTTATTTTTAATAGATAAGAAACATACTGCTTATAATGCTGAAATTATTTTCTGCC----AAGGTCACAC--AAAGTTAACAGCCATCCAAAATGTTTTGCTGTATTTTTGCC--------------------------------------------------------C-ATGAAAAATCAGGTAATTTTTTAA---ACTAAATCCAGATGTTTGGAGATGTCTTAACAATCTCAAAGATTTCTTTTCAGACCCG i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912449 185 + 72247402 A---TATTATTAATAGATAAGAAATGTAATGATTCTAATGCTGAAA-TATTTTTT-CC----AAGGTCACA---AAAATAAATGGTCGTATGAAATTCTTTGCTATATTTTTTCC----------------------------------------------------------AAGAAAAATGAAGTAATTTCTGTA---ACTACATCCAGAAGTTTGGAGATGCTCTAACTATCCCAAAGCTTTCTTTTCAGACTCA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2923329 188 + 9850184 ATCTTATTATTAATAGATAAGAAATGTAATGATTGTAATACTGAAA-TATTTTTT-CC----AAGGTCACAC--AAAATTAATGGTCATATGAAATTCTTTGCTATATTTTTTCC----------------------------------------------------------AAGAAAAATGAAGTAATTTCTGTA---ACTACATCCAGAAGTTTGAAGATCCTTTAATTAT-CCAAAGCTTTCTCTTCAGACTCA i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80444322 247 + 88915250 atcctatttttaatagat-agaaatataagtcttgtaatgctgaaattatttttt-cc----aaggtcacacagagagttaatggcCATCAGAAAGGCTTTGCTTTATTGTTCTCTCAAGTATCTTGTCTTCTAATGCTTAGGTTT----GGAGCCAAAGCATTTTTGGTAC-CAGAAAACTCAGGGAGTTTCTGTAAATACCACATTCCAAGGATTGGATATGTTTTAAGGATTCCAAAGAGTTCTTTTGAGACCCA i canFam3.chr5 I 511 C 0 s dasNov3.JH569970 904504 240 + 1009443 atcttatttttaacagattaaaaatataaggtttataatgctgaaattatttttt--t----aaggtcacac--tgagttattggcTATCAGAAATGCTCTGCTGTATTTTTGTC------AAAGTACCTTGTCCTCTCAAGCTTCAGTAGGAACTTAAGAATTTTTGGTAC-CAGAAAAACTAGGTAGTTTCTGCA---ACTATATCCAAAGAGTTGGAGATGCCTCAAAGATCCCAAAGACTTTTGTTCAGATACA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13675012 2168 + 13852661 I a score=818213.000000 s hg38.chr16_GL383557v1_alt 26097 95 + 89672 AGCACAGAAGAAGTAGGAGAGGAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAATGGACTACATCTTCCT s panTro5.chr16 21452151 95 - 81586097 AGCACAGAAGAAGTAGGAGAGGAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAATGGACTACATCTTCCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21518926 95 - 90481686 AGCACAGAAGAAGTAGGAGAGGAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAATGGACTACATCTTCCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751860 95 + 3010529 AGCACAGAAGAAGTAGGAGAGGAT----------------ATGAGAAAT--AGAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAATGGACTACATCTTCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53865987 96 + 163208435 AGCACAGAGGAAGTAGGACAGGAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAAGAAACATGTAAGTGGTAGAGGAATAAAGAATGGACTACATCCTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337224 95 - 74971481 AGCACAGAGGAAGTAGGAGGGTAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAACGAACTACATCTTCCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046525 95 - 78541002 AGCACAGAGGAAGTAGGAGGGTAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAACGAACTACATCTTCCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442458 95 + 26466322 AGCACAGAGGAAGTAGGAGGGTAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAGCGAACTACATCTTCCT i macNem1.NW_012011355v1 I 1439 C 0 s cerAty1.NW_011999143v1 20767215 95 + 43916225 AGCACAGAGGAAGTAGGAGGGTAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAACGAACTACATCTTCCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203744 95 + 75399963 AGCACAGAGGAAGTAGGAGGGTAT----------------ATGAGAAAT--AAAGAG-----ACTAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAATGAACTACATCTTCCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752680 95 - 7209941 AGCACAGAGGAAGTAGGAGGGTAT----------------ATGAGAAAT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAT-AAGAACGAACTACATCTTCCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 496961 95 + 3907144 AGCACAGAGGAAGTAGGAGGGGAT----------------ATGAGAAGT--AAAGAG-----AATAATGGGAGGAAACATGTAAGTGGTAGAGGAAC-AAGAATGAACTACATCTTCCT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912634 97 + 72247402 AGCACAGAGGAAGTAGGAGGGAAT----------------ATGAGAAATTAAAAGAG-----AATAATGGGAGGAAATGGGTAGGTGGTAGAGTAAT-AAGAATGAACCAGATCTTCCT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2923517 92 + 9850184 -----AGAGGAAGTAGGAGGGAAT----------------ATGAGAAATTAAAAGAG-----AATAATGGGAGGAAACAGGTAGGTGGTAGAGTAAT-AGGAATGAACCAAATCTTCCT i proCoq1.NW_012152729v1 C 0 I 284 s canFam3.chr5 80444569 100 + 88915250 AGCACAAAAGAAATAAAAGAGAAT----------------ATGAACAAT--AAAAAGAAAATAAAAATGGGAGGAAACTGGTTGGTGGTAGAGGAGT-AAGAGCAGACCAGATCTTTCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904744 101 + 1009443 AGCATAGAGGAAGAAGGAGGATATGATGGGGGGGCGGGGGGTGGGGTGG--GGAAAG-----ACTACTGGGAGGAAACGGGGAGACGGTAGAAGAAG-AG----------CAGCTTTCT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13675012 2168 + 13852661 I a score=52057.000000 s hg38.chr16_GL383557v1_alt 26192 8 + 89672 ACCAACCA s panTro5.chr16 21452246 8 - 81586097 AACAACCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519021 8 - 90481686 ACCAACCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751955 8 + 3010529 ACCAACCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866083 8 + 163208435 AACAACCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337319 8 - 74971481 ATCAACCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046620 8 - 78541002 ATCAACCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442553 8 + 26466322 ATCAACCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767310 8 + 43916225 ATCAACCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203839 8 + 75399963 ATCAACCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752775 8 - 7209941 ATCAACCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497056 8 + 3907144 ATCAACCA i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54912731 8 + 72247402 TCCAACCA i micMur3.chr20 C 0 I 236 s canFam3.chr5 80444669 6 + 88915250 CTCAAC-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904845 8 + 1009443 TCCAACCA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13675012 2168 + 13852661 I a score=266778.000000 s hg38.chr16_GL383557v1_alt 26200 39 + 89672 CACACAAACTCCTTAAAGAGAAGCAGAGG-CAGAACGTGC s panTro5.chr16 21452254 39 - 81586097 CACACAAACTCCTTAAAGAAAAGCAGAGG-AAGAACATGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519029 39 - 90481686 CACACAAACTCCTTAAAGAAAAGCAGAGG-AAGAACGTGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 751963 39 + 3010529 CACACAATCTCCTTAAAGAGAAGCAGAGG-AAGAACATGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866091 36 + 163208435 CACACAAACTCTCTTAA---AAGCAGAGG-AAGAATGTGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337327 39 - 74971481 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCGTGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046628 39 - 78541002 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCGTGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442561 39 + 26466322 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCGTGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767318 39 + 43916225 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCGTGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203847 39 + 75399963 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCGTGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752783 39 - 7209941 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCGTGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497064 39 + 3907144 CACACAAACTCCTTAAAGAGAAGCAGAGG-AAGAGCATGC i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80444675 38 + 88915250 --CACAAACTCCCTAGAGAGAATCAGAGGAAAAAACATGC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904853 35 + 1009443 ----CAATCTCCTCAGGGAGAAGCAGAGA-AAAAACATGC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e calJac3.chr20 21505865 180 - 44557958 I e otoGar3.GL873566 13675012 2168 + 13852661 I a score=291451.000000 s hg38.chr16_GL383557v1_alt 26239 41 + 89672 AATGAAGACATTTCTCTTGTCAAAAATACACATGTGAA------AAA s panTro5.chr16 21452293 41 - 81586097 AATGAAGACATTTCTCTTGTCAAAAATACACATGTGAA------AAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519068 41 - 90481686 AATGAAGACATTTCTCTTGTCAAAAATACACATGTGAA------AAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752002 41 + 3010529 AATGAAGACATTTCTCTTGTCAAAAATACACATGTGAA------AAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866127 41 + 163208435 AATGAAGTCACTTCTCTTGTCAAAAATATACATGTGAA------AAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337366 41 - 74971481 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046667 41 - 78541002 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442600 41 + 26466322 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767357 41 + 43916225 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203886 41 + 75399963 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752822 41 - 7209941 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497103 41 + 3907144 AATGAAGACATTTCTCTTGTCAAAAATATACATGTGAA------AAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506045 38 - 44557958 aaagaaggcatt---------aaaaataaataaataaataaaataaa i calJac3.chr20 I 180 C 0 s canFam3.chr5 80444713 39 + 88915250 AAGGAGAACATTTTTCTTGTC-AAAATGTATATATGAA------AA- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904888 40 + 1009443 AAGGAAAAAGTTTTTCTTGTTAAAAA-GTATTTGTGAA------AAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M e otoGar3.GL873566 13675012 2168 + 13852661 I a score=126101.000000 s hg38.chr16_GL383557v1_alt 26280 20 + 89672 -TAggccaggcatgaggactc s panTro5.chr16 21452334 20 - 81586097 -CAggccaggcatgaggactc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519109 20 - 90481686 -TAggccaggcatgaggactc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752043 20 + 3010529 -TAggccaggcatgagggctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866168 20 + 163208435 -CAggccaggcatgagggctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337407 20 - 74971481 -TAggccaggcatgagggctc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046708 20 - 78541002 -TAggccaggcatgagggctc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442641 20 + 26466322 -TAggccaggcatgagggctc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767398 20 + 43916225 -TAggccaggcatgaggactc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203927 20 + 75399963 -TAggccaggcatgagggctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752863 20 - 7209941 -TAggccaggcatgagggctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497144 20 + 3907144 -CAggccaggcatgagggctc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506083 20 - 44557958 -aTAgccgggtgcagttgctc i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13677180 20 + 13852661 -TAggctcagcacagtggctc i otoGar3.GL873566 I 2168 C 0 s canFam3.chr5 80444752 17 + 88915250 ----TATATGTACAAATACAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 904928 21 + 1009443 TTAGATTAGATTCAAAGTCTC i dasNov3.JH569970 C 0 I 143 e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M a score=816679.000000 s hg38.chr16_GL383557v1_alt 26300 124 + 89672 acatctgtaatcccagcactttgggaggccgaggctggtggattgcctgagctcaagagttcaagaccagcctgggcga----catggcgaaaccctgtct-taccaaaagtacaaaaaactagctggg s panTro5.chr16 21452354 124 - 81586097 acatctgtaatcccagcactttgggaggccgaggctggtggattgcctgagctcaggagttcaagaccagcctgggcca----catggcgaaaccctgtct-taccaaaagtacaaaaaactagctggg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519129 123 - 90481686 acatctgtaatcccagcactttgggaggccgaggctggtggattgcctgagctcaggagttcaagaccagcctgggcca----catggcgaaaccctgtct-taccaaaagtac-aaaaactagctggg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752063 124 + 3010529 acatctgtaatcccagcactttgggaggccgaggctggtggattgcctgagctcaggagttcaagaccagcctgggcga----catggtgaaaccctgtct-taccaaaagtacaaaaaactagctggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866188 122 + 163208435 acatctgtaatcccagcactttgggaggctgaggctggtggattgcctgagctcaggagttcgagaccagcctgggcga----catgacgaaatc--gtct-catcaaaaatacaaaaaactagctggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337427 124 - 74971481 acatctgtaatcccagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgcgcaa----catggcgaaactctgtct-tacctaaaatacaaaaaactagctggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046728 124 - 78541002 acatctgtaatcccagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgcgcaa----catggcgaaactctgtct-tacctaaaatacaaaaaactagctggg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442661 124 + 26466322 acatctgtaatcccagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgcgcaa----catggcaaaactctgtct-tacctaaaatacaaaaaactagctggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767418 124 + 43916225 acatctgtaatcctagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgcgcaa----catggcgaaactctgtct-tacctaaaatacaaaaaactagctggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58203947 124 + 75399963 acatctgtaatcccagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgcgcaa----catggcaaaactctgtct-tacctaaaatacaaaaaactagctggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6752883 124 - 7209941 acatctgtaatcccagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgcgcaa----catggcgaaactctgtct-tacctaaaatacaaaaaactagctggg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497164 124 + 3907144 acatctgtaatcccagcactttgggaggctgaggctggtggatcgcctgagctcaggagttcgagaccagcctgggcaa----catggcgaaactctgtct-tacctaaaatacaaaaaattagctggg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506103 122 - 44557958 acgcctgtaatcctagcactttgggtggccgaggcgggtggatca--tgaggtcaagagatcgagaccatcctggccaa----catagtgaaacactatctctactaaaaatac-aaaaattatccagg i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13677200 121 + 13852661 atacctgtaatcctagcactctgcgaggtttagaggggtggactgcttaagctcaccagtttgagaccagcacgagccagagccagagggagaccttgtca-t---taaact----aaaaatagccagg i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80444769 50 + 88915250 ACAAATATATTT-----------------------------------------------------ACAAATCTGCCAGA----CCTGGC-------------TGCT---------AAAAACTAGCTTAG i canFam3.chr5 C 0 I 72 e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e dasNov3.JH569970 904949 143 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M a score=115626.000000 s hg38.chr16_GL383557v1_alt 26424 18 + 89672 cgtggtggtgtaggactg s panTro5.chr16 21452478 18 - 81586097 cgtggtggtgtaggactg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519252 18 - 90481686 catggtggtgtaggactg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752187 18 + 3010529 cgtggtggtgtaggactg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866310 18 + 163208435 cgtggtggtgtaagactg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337551 18 - 74971481 cgtggtggtgtaggactg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046852 18 - 78541002 cgtggtggtgtaggactg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442785 18 + 26466322 cgtggtggtgtaggactg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767542 18 + 43916225 cgtggtggtgtaggactg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204071 16 + 75399963 cgtggtggtgtaggac-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753007 18 - 7209941 cgtggtggtgtaggactg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497288 18 + 3907144 cgtggtggtgtaggactg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506225 18 - 44557958 catggtggcaggtgcctg i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13677321 18 + 13852661 tactgtggtggggctctg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80444819 72 + 88915250 I e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e dasNov3.JH569970 904949 143 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e saiBol1.JH378225 6307857 2293 + 6628207 M a score=911782.000000 s hg38.chr16_GL383557v1_alt 26442 114 + 89672 tagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgcgagg-t--ggaggttgcagtgagctgagattgccactgcactccagcctaggcgacagagcgaggctc s panTro5.chr16 21452496 114 - 81586097 tagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggagg-t--ggaggttgcagtgagccgagattgccactgcactccagcctaggcgacagagcgaggctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519270 114 - 90481686 tagtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggagg-t--ggacgttgcagtgagccgagattgccactgcactccagcctaggcgacagagcgaggctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752205 113 + 3010529 tagtcccagctactcaggaggctgaggcagcagaatcgcttgaacccgggagg-t--ggaggttgcagtgagccgagattgccactgcactccagcctaggcgacaga-cgaggctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866328 114 + 163208435 tagtccaagctactcaggaggctgaggcaggagaatctcttgaacccgggagg-t--ggaggttgcagtgagccgagattgccactgtactccagcctaggcaaaagagggagattc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337569 114 - 74971481 tagtcccagctactcaggagtctgaggcaggagaattgcctgaacccgggagg-t--ggaggttgcagtgagccgagattaccactacactccaacctgggcgacacagtgagactc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046870 114 - 78541002 tagtcccagctactcaggagtctgaggcaggagaattgcctgaacccgggagg-t--ggaggttgcagtgagccgagattaccactacactccaacctgggcgacacagtgagactc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442803 114 + 26466322 tagtcccagctactcaggagtctgaggcaggagaattgcctgaacccgggagg-t--ggaggttgcagtgagccgagattaccactacactccaacctgggcgacacagtgagactc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767560 114 + 43916225 tagtcccagctactcaggagtctgaggcaggagaattgcctgaacccaggagg-t--ggaggttgcagtgagccgagattgccactacactccaacctgggcgacacagtgagactc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204087 114 + 75399963 tagtcccagctactcaggagtctgaggcaggagaattgcctgaacccgggagg-t--ggaggttgcagtgagccgagattgccactgcactccaacctgggcgacacagtgagactc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753025 114 - 7209941 tagtcccagctactcaggagtctgaggcaggagaattgcctgaacccgggagg-t--ggaggttgcagtgagccgagattgccactacactccaacctgggcgacacagtgagactc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497306 115 + 3907144 tagtcccagctactcaggagtctgaggcaggagaatcgcctgaacccgggaggtt--ggaggttgcagtgagccgagattaccactgcactccaacctgggcgacagagtgaaactc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506243 114 - 44557958 taatcccagctacttggaaggctgaggcaggagaatcgcttgaaccagggagg-t--ggaggttgcagtgaactgagatcaccactgcactccagcctgggcaacagagtgagactc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310218 114 + 6628207 taatcccacctacttgggaggctgaggcaggagaatcgcttgaaccagggagg-c--ggaggttgcagtgaactgagatcaccactgcactccagcctgggcaatagagccagactc i saiBol1.JH378225 M 2293 C 0 s otoGar3.GL873566 13677339 115 + 13852661 tagtcccagttacttgggaggctgaggcaaaaaaatctcttgagcccaagagt-tagagaggttgctgtgagttatga-caccagggcaccctaccaagcttgacaaagtcagacac i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80444819 72 + 88915250 I e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e dasNov3.JH569970 904949 143 + 1009443 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=14377.000000 s hg38.chr16_GL383557v1_alt 26556 2 + 89672 tg s panTro5.chr16 21452610 2 - 81586097 tg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519384 2 - 90481686 tg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752318 2 + 3010529 tg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866442 2 + 163208435 tg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337683 2 - 74971481 tg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046984 2 - 78541002 tg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442917 2 + 26466322 tg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767674 2 + 43916225 tg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204201 2 + 75399963 tg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753139 2 - 7209941 tg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497421 2 + 3907144 tg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506357 2 - 44557958 ca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310332 2 + 6628207 ca i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13677454 2 + 13852661 tg i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 905092 2 + 1009443 TA i dasNov3.JH569970 I 143 C 0 e canFam3.chr5 80444819 72 + 88915250 I e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=30284.000000 s hg38.chr16_GL383557v1_alt 26558 29 + 89672 ttcccctacccccc-----------------aaaaaaaaaaaaaaa-------- s panTro5.chr16 21452612 28 - 81586097 ttccccta-cccaa-----------------aaaaaaaaaaaaaaa-------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519386 22 - 90481686 ttccccta-ccc-----------------------aaaaaaaaaac-------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752320 35 + 3010529 ttccccta-ccccc-----caaaaaa-----aaaaaaaaaaaaaaa-------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866444 42 + 163208435 ttccccta-ccaaaaaaaacaaaaaaac---aaaaaaacaaaaaaa-------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337685 19 - 74971481 tcccacta-cc--------------------------aaaaaaaaa-------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21046986 19 - 78541002 tcccacta-cc--------------------------aaaaaaaaa-------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442919 19 + 26466322 tcccacta-cc--------------------------aaaaaaaaa-------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767676 19 + 43916225 tcccacta-cc--------------------------aaaaaaaaa-------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204203 19 + 75399963 tcccacta-cc--------------------------aaaaaaaaa-------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753141 18 - 7209941 ccccacta-cc---------------------------aaaaaaaa-------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497423 15 + 3907144 ttccccta-tc------------------------------aaaaa-------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506359 19 - 44557958 tcccCCTA-CC--------------------------AAAAAAATA-------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310334 19 + 6628207 tcccccta-cc--------------------------aaaaaaaaa-------- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13677456 13 + 13852661 t----cta-----------------------------aaaaaaaaA-------- i otoGar3.GL873566 C 0 I 5 s canFam3.chr5 80444891 30 + 88915250 TTACTCTG-TA---------------TCTTGAAATGAAATTAAGAA-------- i canFam3.chr5 I 72 I 6 s dasNov3.JH569970 905094 29 + 1009443 TTACTGTA-TCCT------------------------AAAAGAAAATTAAGTAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54912739 236 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=43953.000000 s hg38.chr16_GL383557v1_alt 26587 14 + 89672 aaaaaTCAACTCTG s panTro5.chr16 21452640 14 - 81586097 aaaaaTCAACTCTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519408 14 - 90481686 aaaaaTCAACTCTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752355 14 + 3010529 aaaaaTCAACTCTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866486 14 + 163208435 acaaaTCAACTCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337704 12 - 74971481 aaaaaTCAA--CTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047005 12 - 78541002 aaaaaTCAA--CTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442938 12 + 26466322 aaaaaTCAA--CTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767695 12 + 43916225 aaaaaTCAA--CTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204222 12 + 75399963 aaaaaTCAA--CTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753159 12 - 7209941 aaaaaTCAA--CTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497438 14 + 3907144 aaaaaTCAACTCTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506378 3 - 44557958 AA---------T-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310353 10 + 6628207 aaaaTTTTT--T-- i saiBol1.JH378225 C 0 C 0 s micMur3.chr20 54912975 12 + 72247402 AAAAATCAA--CTG i micMur3.chr20 I 236 I 2 s otoGar3.GL873566 13677474 12 + 13852661 TATGAATAA--CTT i otoGar3.GL873566 I 5 I 2 s canFam3.chr5 80444927 9 + 88915250 AAAACTCTA----- i canFam3.chr5 I 6 C 0 s dasNov3.JH569970 905123 14 + 1009443 AAAAATTAACTCTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e aotNan1.NW_018500622v1 9256893 491 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=11709.000000 s hg38.chr16_GL383557v1_alt 26601 1 + 89672 T s panTro5.chr16 21452654 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519422 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752369 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866500 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337716 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047017 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442950 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767707 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204234 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753171 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497452 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506381 1 - 44557958 T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310363 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257384 1 - 10531588 T i aotNan1.NW_018500622v1 I 491 C 0 s micMur3.chr20 54912989 1 + 72247402 T i micMur3.chr20 I 2 C 0 s otoGar3.GL873566 13677488 1 + 13852661 A i otoGar3.GL873566 I 2 I 29 s canFam3.chr5 80444936 1 + 88915250 T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905137 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=209543.000000 s hg38.chr16_GL383557v1_alt 26602 20 + 89672 TACATTGTAAA--GGACAACAG s panTro5.chr16 21452655 20 - 81586097 TACATTGTAAA--GGACAACAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519423 20 - 90481686 TACATTGTAAA--GGACAACAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752370 20 + 3010529 TACATTGTAAA--GGACAACAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866501 20 + 163208435 TACATTGTAAA--GGACAACAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337717 20 - 74971481 TACATTGTAAA--GGACAACAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047018 20 - 78541002 TACATTGTAAA--GGACAACAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14442951 20 + 26466322 TACATTGTAAA--GGACAACAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767708 20 + 43916225 TACATTGTAAA--GGACAACAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204235 20 + 75399963 TACATTGTAAA--GGACAACAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753172 20 - 7209941 TACATTGTAAA--GGACAACAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497453 20 + 3907144 TACATTGCAAA--GGACAACAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506382 20 - 44557958 TACATTGTAAA--GGACGACAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310364 20 + 6628207 TTAATTGTAAA--GGACAACAT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257385 20 - 10531588 TACATTGTAAA--GGATAACAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54912990 22 + 72247402 TGCACTGTAAAATGGACAACAA i micMur3.chr20 C 0 C 0 s canFam3.chr5 80444937 21 + 88915250 TACACTGTAAG-TGGACAAAGC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905138 21 + 1009443 TCGATTGTAAA-TGGACAAAGC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2923609 284 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=1371882.000000 s hg38.chr16_GL383557v1_alt 26622 120 + 89672 AGATCAATATCAAAACATCTCTGGTGAAGAATGGTTTCCAG-AATTCACTTTAGTC-TTT--CATTGCTGT-T-TTTAGCAGAATTTGT------ATT--------TGCCCAGAGCCAGTTTAA--TTTTTTCAATTA---------------------------------------------------CTTT s panTro5.chr16 21452675 120 - 81586097 AGATCAATATCAAAACATCTCTGGTGAAGAATGGTTTCCAG-AATTCACTTTAGTC-TTT--CATTGCTGT-T-TTTAGCAGAATTTGT------ATT--------TGCCCAGAGCCAGTTTAA--TTTTTTCAATTA---------------------------------------------------CTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519443 120 - 90481686 AGATCAATATCAAAACATCTCTGGTGAAGAATGGTTTCCAG-AATTCACTTTAGTC-TTT--CATTGCTGT-T-TTTAGCAGAATTTGT------ATT--------TGCCCAGAGCCAGTTTAA--TTTTTTCAATTA---------------------------------------------------CTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752390 119 + 3010529 AGATCAATATCAAAACATCTCTGGTGAAGAATGGTTTCCAG-AATTCACTTTAGTC--TT--CATTGCTGT-T-TTTAGCAGAATTTGT------ATT--------TGCCCAGAGCCAGTTTAA--TTTTTTCAATTA---------------------------------------------------CTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866521 121 + 163208435 AGATCAATATCAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTC-TTT--TATTGTTGT-T-TTTAGCAGAATTTAT------ATT--------TGCCCAGAGCCAGTTTAA--TTTTTTCAATTA---------------------------------------------------CTTT i nomLeu3.chr2 C 0 I 6 s rheMac8.chr20 21337737 122 - 74971481 AGATTAATATTAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCAGAGTTGAT------ACT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i rheMac8.chr20 C 0 I 6 s macFas5.chr20 21047038 122 - 78541002 AGATTAATATTAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCAGAGTTGAT------ACT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i macFas5.chr20 C 0 I 6 s macNem1.NW_012011355v1 14442971 122 + 26466322 AGATTAATATTAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCAGAGTTGAT------ACT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i macNem1.NW_012011355v1 C 0 I 6 s cerAty1.NW_011999143v1 20767728 122 + 43916225 AGATTAATATTAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCAGAGTTGAT------ACT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i cerAty1.NW_011999143v1 C 0 I 6 s chlSab2.chr5 58204255 122 + 75399963 AGATTAATATTAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCAGAGTTGAT------ACT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i chlSab2.chr5 C 0 I 6 s manLeu1.NW_012101698v1 6753192 122 - 7209941 AGATTAATATTAAAACATCTCTGGTGAAGAATGGTTTTCAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCCGAGTTGAT------ACT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i manLeu1.NW_012101698v1 C 0 I 6 s colAng1.NW_012123265v1 497473 122 + 3907144 AGATTAACATCAAAACATTTCTGGTGAAGAATGGTTTTAAGAAATTCACTTTAGTG-TTT--TATTGTTGT-T-TTTAGCAGAGTTGAT------ATT--------TGCCCAGAGCCAGTTTAA-TTTTTTTCAATTA---------------------------------------------------CTTT i colAng1.NW_012123265v1 C 0 I 6 s calJac3.chr20 21506402 127 - 44557958 TGATTGATATCAAAACATCTCTGGTGAAGCATGGTTTTCAGAAATTCACTTTAGTCTTTT--TGTTGTTGT-T-TTTAGCAGAATTTAGCAGAAAACT--------GGCCCAGAGCCAGtttaa---tttttcaatta---------------------------------------------------tttt i calJac3.chr20 C 0 I 6 s saiBol1.JH378225 6310384 174 + 6628207 AGATCAATATCAAAACATCTCTGGTGAAGTATGGTTTTCAGAAATTCACTTTAGTCTTTT--TGTTGTTGT-T-TTTAGCAGAATTTAT------ATT--------TGCCCAGAGCCAGtttaa-tttttttcaattattattaataatatttaaattttcaatttaattattaatatttaaattattgtttt i saiBol1.JH378225 C 0 I 6 s aotNan1.NW_018500622v1 9257405 122 - 10531588 AGATCAATATCAAAACATCTCTGGTGAAGCATGGTTTTCAGAAATTCACTTTAGTCTTTT--TGTTGTTGT-T-TTTAACAGAATTTAT------ACT--------TGCCCAGAGCCAGTTTAA--TTTTTTCAATTA---------------------------------------------------TTTT i aotNan1.NW_018500622v1 C 0 I 6 s micMur3.chr20 54913012 120 + 72247402 AAATCAATATTAAAACATCTCTGGTGAGCAGTGGTTTTTAGAAATTCACTTTAGTT-TTT----TTGTTGT-TATTCTGCAGAATTTAT------ATT--------TGCCAAAAGCCAACTAAA--TTGTTTCAATTA---------------------------------------------------CTTT i micMur3.chr20 C 0 I 35 s proCoq1.NW_012152729v1 2923893 123 + 9850184 AGATCAATATTAAAACATCTCTGGTGAGCAGTGG-TTTCAGAAATTCACTTTAGTC-TTTTTTGTTGTTGT-TATTCTGCAGAATTTAT------ATT--------TGCCAAGAGCCAACTTAA--TTGTTTCAATTA---------------------------------------------------CTTT i proCoq1.NW_012152729v1 I 284 I 30 s canFam3.chr5 80444958 122 + 88915250 AGATCAATATAAAAACATCTGTGGTGAGTCGTGATTTTCAGAAATTCATTTTAGCC-CTT--TTTTGTTATCT-TTCTGCAAACTTTCT------ATC--------TGTCCAGAGCCAGCTTAA--ATTTTTCAATTA---------------------------------------------------CTTT i canFam3.chr5 C 0 I 6 s dasNov3.JH569970 905159 121 + 1009443 AGATCAATATTAAACCTTCTGTGATGAGCAGTGGTTTTCAGAAATTCACTT----G-CCT--------TGT-T-TTTTGCAGAATGTAT------ATTTACCTATATGCTCAGAGCCAGCTTAATTTTTTCCCAATCA---------------------------------------------------CTTT i dasNov3.JH569970 C 0 I 6 e mm10.chr8 22449197 497 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=176609.000000 s hg38.chr16_GL383557v1_alt 26742 26 + 89672 GTGTTCATTGTAAAAA-ATATGTATTT s panTro5.chr16 21452795 26 - 81586097 GTGTTCATTGTAAAAA-ATATGTATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519563 26 - 90481686 GTGTTCATTGTAAAAA-ATATGTATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752509 26 + 3010529 ATGTTCATTGTAAAAA-ATATGTATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866648 26 + 163208435 ATGTTCATTGTAAAAA-ATATGTATTT i nomLeu3.chr2 I 6 C 0 s rheMac8.chr20 21337865 26 - 74971481 GTGTTCATTGTAAAAA-ATATGTATTT i rheMac8.chr20 I 6 C 0 s macFas5.chr20 21047166 26 - 78541002 ATGTTCATTGTAAAAA-ATATGTATTT i macFas5.chr20 I 6 C 0 s macNem1.NW_012011355v1 14443099 26 + 26466322 ATGTTCATTGTAAAAA-ATATGTATTT i macNem1.NW_012011355v1 I 6 C 0 s cerAty1.NW_011999143v1 20767856 26 + 43916225 CTGTTCATTGTAAAAA-ATATGTATTT i cerAty1.NW_011999143v1 I 6 C 0 s chlSab2.chr5 58204383 26 + 75399963 ATGTTCATTGTAAAAA-ATATGTATTT i chlSab2.chr5 I 6 C 0 s manLeu1.NW_012101698v1 6753320 26 - 7209941 ATGTTCATTGTAAAAA-ATATGTATTT i manLeu1.NW_012101698v1 I 6 C 0 s colAng1.NW_012123265v1 497601 26 + 3907144 ATGTTCATTGTAAAAA-ATATATATTT i colAng1.NW_012123265v1 I 6 C 0 s calJac3.chr20 21506535 17 - 44557958 atgttaataaaaaaa----------tt i calJac3.chr20 I 6 C 0 s saiBol1.JH378225 6310564 16 + 6628207 atgttaataaaaaaa-----------t i saiBol1.JH378225 I 6 C 0 s aotNan1.NW_018500622v1 9257533 19 - 10531588 ATGTTAATAAAAAAAA-A-------AT i aotNan1.NW_018500622v1 I 6 C 0 s canFam3.chr5 80445086 26 + 88915250 GTGTTCATTGAAAAAC-AAATTCAGTT i canFam3.chr5 I 6 C 0 s dasNov3.JH569970 905286 27 + 1009443 ATGTTCATTATAAAAATAAATGCATTT i dasNov3.JH569970 I 6 C 0 e micMur3.chr20 54913132 35 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2924016 30 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=291351.000000 s hg38.chr16_GL383557v1_alt 26768 21 + 89672 -TTATCCTAGAATGTAATTAAT s panTro5.chr16 21452821 21 - 81586097 -TTATCCTAGAATGTAATTAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519589 21 - 90481686 -TTATCCTAGAATGTAATTAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752535 21 + 3010529 -TTATCCTAGAATGTAATTAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866674 21 + 163208435 -TTATCCTAGAATGTAATTAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337891 21 - 74971481 -TTATCCTAAAATGTAATTAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047192 21 - 78541002 -TTATCCTAAAATGTAATTAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443125 21 + 26466322 -TTATCCTAAAATGTAATTAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767882 21 + 43916225 -TTATCCTAAAATGTAATTAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204409 21 + 75399963 -TTATCCTAAAATGTAATTAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753346 21 - 7209941 -TTATCCTAAAATGTAATTAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497627 21 + 3907144 -TTAGCCTAGAATGTAATTAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506552 21 - 44557958 -ttattCTTGAATGTAATTAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310580 21 + 6628207 -ttattctagaatataattaat i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257552 21 - 10531588 -TTATTCTAGAATGTAATTAAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913167 21 + 72247402 -TTATTCTAGAATGTAATTAAT i micMur3.chr20 I 35 C 0 s proCoq1.NW_012152729v1 2924046 21 + 9850184 -TTATTCTAGAATGTAATTAAT i proCoq1.NW_012152729v1 I 30 C 0 s canFam3.chr5 80445112 21 + 88915250 -TTATCCTAGGATGTAACTAAT i canFam3.chr5 C 0 I 111 s dasNov3.JH569970 905313 22 + 1009443 TCAATTCTAGAATGTAATTAAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=213661.000000 s hg38.chr16_GL383557v1_alt 26789 14 + 89672 AATCTTTGAAGAGA s panTro5.chr16 21452842 14 - 81586097 AATCTTTGAAGAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519610 14 - 90481686 AATCTTTGAAGAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752556 14 + 3010529 AATCTTTGAAGAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866695 14 + 163208435 AATCTTTGAAGAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337912 14 - 74971481 AATCTTTGAAGAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047213 14 - 78541002 AATCTTTGAAGAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443146 14 + 26466322 AATCTTTGAAGAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767903 14 + 43916225 AATCTTTGAAGAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204430 14 + 75399963 AATCTTTGAAGAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753367 14 - 7209941 AATCTTTGAAGAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497648 14 + 3907144 AATCTTTGAAGAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506573 14 - 44557958 AATCTTTGAAGAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310601 14 + 6628207 aatCTTTGAAGAGA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257573 14 - 10531588 AATCTTTGAAGAGA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913188 14 + 72247402 AATCTTTGAAGAGA i micMur3.chr20 C 0 I 10 s proCoq1.NW_012152729v1 2924067 14 + 9850184 AATCTTTGAAGAGA i proCoq1.NW_012152729v1 C 0 I 10 s canFam3.chr5 80445244 14 + 88915250 AATCTTTGAAAGTA i canFam3.chr5 I 111 C 0 s dasNov3.JH569970 905335 14 + 1009443 AATCTTTGAAGGGA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449197 497 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=306183.000000 s hg38.chr16_GL383557v1_alt 26803 33 + 89672 C-AATACAGA------ATCCATAGTACTCAAAAAAATTAT s panTro5.chr16 21452856 33 - 81586097 C-AATACAGA------ATCCATAGTACTCAAAAAAATTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519624 33 - 90481686 C-AATACAGA------ATCCATAGTACTCAAAAAAGTTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752570 33 + 3010529 C-AATACAGA------ATCCATAGTACTCAAAAAAATTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866709 39 + 163208435 C-AATACAGAATATTTATCCATAGTGCTCAAAAATATTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337926 40 - 74971481 CGAATACAGAATATTCATCCATAGTACTCAAAAACATTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047227 40 - 78541002 CGAATACAGAATATTCATCCATAGTACTCAAAAACATTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443160 40 + 26466322 CGAATACAGAATATTCATCCATAGTACTCAAAAACATTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767917 40 + 43916225 CGAATACAGAATATTCATCCATAGTACTCAAAAACATTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204444 40 + 75399963 CGAATACAGAATATTCATCCATAGTACTCAAAAATATTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753381 40 - 7209941 CGAATACAGAATATTCATCCATAGTACTCAAAAACATTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497662 40 + 3907144 CGAATACAGAATATTCATCCATAGTACTCAAAAATATTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506587 40 - 44557958 CTAATACAAAATATTCATCCTTAGTACTGAAAAATATTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310615 40 + 6628207 CTAATATAGAATATTCATCTTCAGTACTAAAAAATATTAT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257587 40 - 10531588 CTAATACAGAATATTCATCTTTAGTACTGAAAAATATTAT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80445258 40 + 88915250 CTAATGCCAAGTATTTATCCTTAGTACTCTAAAATGTAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905349 40 + 1009443 CCAATCCTGAATATTTATCCTTAGAGCTCTAAAACATGGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913202 10 + 72247402 I e mm10.chr8 22449197 497 - 129401213 I e proCoq1.NW_012152729v1 2924081 10 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=858860.000000 s hg38.chr16_GL383557v1_alt 26836 77 + 89672 CTACACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTACTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT s panTro5.chr16 21452889 77 - 81586097 CTACACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTACTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519657 77 - 90481686 CTACACTATTAGTGGTTTTCTAAAATGTTGCCATCCCTTACTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752603 77 + 3010529 CTACACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTACTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866748 77 + 163208435 CTATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTACTGCAATGAAAACAGAGTTAACAATGTAAATACTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21337966 77 - 74971481 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTATTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047267 77 - 78541002 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTATTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443200 77 + 26466322 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTATTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20767957 77 + 43916225 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTAATTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204484 77 + 75399963 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTATTGCAATGAAAACAGAGCTAACAATGTAAATAATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753421 77 - 7209941 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTAATTGCAATGAAAACAGAGCTAACAATGTAAATACTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497702 77 + 3907144 ATATACTACTAGTGGTTTTCTAAAATGTTGCCATCCCTTATTGCAATGAAAACAGAGCTAACAATGTAAATACTTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506627 77 - 44557958 ATATACTGCTAGCAGTTTTCTAAAACGTTGCCATCTCTTATTGCAATGAAAACAGAGTTAACAATGTAAATACTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310655 77 + 6628207 ATATATTGCTAGCGGTTTTCTAAAATGTTATCATCCCTTATTGCAATGAAAACAGAGTTAACAACGTAAATACTTTT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257627 77 - 10531588 ATATACTGCTAGCGGTTTTCTAAAATGTTGCCATCCCTTATTGCAATGAAAACAGAGTTAACAATGTAAATACTTTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22449694 64 - 129401213 CCACACAGTAAGTGGTTTTTGAAAATGTAGATTTTTCTTACTACAGTGAAAACAGAGCTGACAA------------- i mm10.chr8 I 497 C 0 s canFam3.chr5 80445298 75 + 88915250 ATAGATTACTAGTGATTTTTTAAAATGTAGACAGCCCTTATCTCAATGAAAAC--AGCTAACAATTTAAATACCTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905389 77 + 1009443 CTATATTCCTATAAGTTTTCTAAAATGTAGATGTCCCTTATTGAAATTAAAACAGTGGCAATAATTTAAATATCTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913202 10 + 72247402 I e proCoq1.NW_012152729v1 2924081 10 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e otoGar3.GL873566 13677489 29 + 13852661 I a score=538541.000000 s hg38.chr16_GL383557v1_alt 26913 44 + 89672 ACTGGCCAACAATTACAGCAAAAT---GAGGCAAATCAAAGACATTT s panTro5.chr16 21452966 44 - 81586097 ACTGGCCAACAATTACAGCAAAAT---GAGGCAAATCAAAGACATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519734 44 - 90481686 ACTGGCCAACAATTACAGCAAAAT---GAGGCAAATCAAAGACATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752680 47 + 3010529 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCAAAGACATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866825 47 + 163208435 ACTGGTCAACAATTACAGCAAAATAAGGAAGCAAACTGAAGACATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338043 47 - 74971481 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047344 47 - 78541002 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443277 47 + 26466322 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768034 47 + 43916225 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204561 47 + 75399963 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753498 47 - 7209941 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497779 47 + 3907144 ACTGGCCAACAATTACAGCAAAATAAGGAGGCAAATCCAAGACATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506704 47 - 44557958 ACTGGCCAACAATTACAGGAAAATAAGGAGGTAAATCCAAGACACTT i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6310732 47 + 6628207 ACTGGCCAACAATTAAAGGAAAGTAACGAGGTAAATTCAAGACACTT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257704 47 - 10531588 ACTGGCCAACAATTACAGGAAAATAAGGAGGTAAATCCAAGACACTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13677518 40 + 13852661 ACTGATCAATAATTACA-CTGAATAAAGAGACAAATCCAAG------ i otoGar3.GL873566 I 29 C 0 s mm10.chr8 22449758 38 - 129401213 ---------CAGTAACATGAGAAAAAGGAAGCAAATTCAAGACATTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80445373 47 + 88915250 CCTGGCCAACAATTACAGCAGAATAAGGAGGTAAACTCAAGATACTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905466 47 + 1009443 ACTGGTCAACCATTACCGCTAAATAATGTGGCAAATTCAAGACATTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913202 10 + 72247402 I e proCoq1.NW_012152729v1 2924081 10 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=1135372.000000 s hg38.chr16_GL383557v1_alt 26957 80 + 89672 AGTGTT-CAGTAAAACAGATTTTGTTTCATTTGGGCAAAGATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT s panTro5.chr16 21453010 80 - 81586097 AGTGTT-CAGTAAAACAGATTTTGTTTCATTTGGGCAAAGATTTCCTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519778 80 - 90481686 AGTGTT-CAGTAAAACAGATTTTGTTTCATTTGGGCAAAGATTTCCTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752727 80 + 3010529 AGTGTT-CAGTAAAACAGATTCTGTTTCATTTGGGCAAAGATTTACTTGTAAAGATGAATATACTCTGGAGAA-TGCTACTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866872 80 + 163208435 AGTGTT-CAGTAAAACAGATTTTGTTTCATTTGGGCAAAGATTTACTTGTAAAGATGACTATACTTTGGAGAA-TGCTACTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338090 79 - 74971481 AGTG-T-AAGTAAAAGAGATTTTGTTTCATTTGGGCAAACATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047391 80 - 78541002 AGTGTT-AAGTAAAACAGATTTTGTTTCATTTGGGCAAACATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443324 80 + 26466322 AGTGTT-AAGTAAAACAGATTTTGTTTCATTTGGGCAAACATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768081 80 + 43916225 AGTGTT-AAGTAAAACAGATTTTGTTTCATTTGGGCAAACATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204608 80 + 75399963 AGTGTT-AAGTAAAACAGATTTTGTTTCATTTGGGCAAACATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753545 80 - 7209941 AGTGTT-AAGTAAAACAGATTTTGTTTCATTTGGGCAAACATTTACTTGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497826 80 + 3907144 AGTGTT-AAGTAAAACAGATTTTGTTTCATTTGGGCAAACATTTACTGGTAAAGATGAATATACTTTGGAGAA-TGCTACTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506752 81 - 44557958 AGTGTT-CAGTAAAACAGATTTTGTTTTATTTGGGCATACATTTACTTGTAAAGATGAGTATACTTTGGAGAATTGCTACTT i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6310779 80 + 6628207 AGTGTT-CAGTAAGACAGATTTTGTTTCATTTGGACATACATTCACTTGTAAAGATGAGTATTCTTAGGAGAA-TGCTACTT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257751 80 - 10531588 AGTGTT-CAGTAAAACAGATTTTGTTTCATTTGGGCATACATTTACTTGTAAAGATGAGTATACTTTGGAGAA-TGCTACTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913212 80 + 72247402 AGTGTT-CAGTGAAATAAATTTCTTTTCGTTTGGGCATGCATTTCTTTGTAAAGATAGATACAATTTGGAGAA-TACTACTC i micMur3.chr20 I 10 C 0 s proCoq1.NW_012152729v1 2924091 80 + 9850184 AGTGTT-CAGTGAAACAGATTTTGTTTCATTTGGGCATACATTTCTTTGTAAAGATGGATACAATTTGGAGAA-CACTACTC i proCoq1.NW_012152729v1 I 10 C 0 s otoGar3.GL873566 13677558 78 + 13852661 --TATT-CAATGAAATAAATGTCCTTTCATTTGGGCATATATTTATTTGTAAAGATGGATACAATTTCAAGAA-TGCTATTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22449796 68 - 129401213 --------AGCAAAACCGTTTTTATTTCA-----GAATGCATTTATTTGTAAATGTAGATGCGATCTGGAGTA-TACTACTT i mm10.chr8 C 0 I 734 s canFam3.chr5 80445420 78 + 88915250 AGTGTT-CAGCGAAACC--TTGTGTTTCATTTGAGCAAACATTTATTTGTAAAGGTGGATACAGTTTGGAGAA-TGCTACTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905513 77 + 1009443 AGTGTTGCTGTGAAACATTCTGTATTTCATTTGAGCATAAATTT----GTAAAGGTAGATATAAGTTAGAGAA-TGCTACTT i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=147747.000000 s hg38.chr16_GL383557v1_alt 27037 12 + 89672 TGTTAAAACTGG s panTro5.chr16 21453090 12 - 81586097 TGTTAAAACTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519858 12 - 90481686 TGTTAAAACTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752807 12 + 3010529 TGTTAAAACTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866952 12 + 163208435 TGTTAAAAGTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338169 12 - 74971481 TGTTAAAATTTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047471 12 - 78541002 TGTTAAAATTTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443404 12 + 26466322 TGTTAAAATTTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768161 12 + 43916225 TGTTAAAATTTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204688 12 + 75399963 TGTTAAAATTTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753625 12 - 7209941 TGTTAAAATTTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497906 12 + 3907144 TGTTAAAATTTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506833 10 - 44557958 TGTTAAAAT--G i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310859 12 + 6628207 TGTTAAAACTGG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9257831 12 - 10531588 TGTTAAAATTGG i aotNan1.NW_018500622v1 C 0 I 325 s micMur3.chr20 54913292 12 + 72247402 TGTTAAAACTGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924171 12 + 9850184 TGTTAAAACTGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13677636 11 + 13852661 TATTAAAACT-A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445498 12 + 88915250 TGCTAAAATTGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905590 12 + 1009443 TGTTGAAATTGG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=22207.000000 s hg38.chr16_GL383557v1_alt 27049 2 + 89672 TG s panTro5.chr16 21453102 2 - 81586097 TG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519870 2 - 90481686 TG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752819 2 + 3010529 TG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866964 2 + 163208435 TG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338181 2 - 74971481 TG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047483 2 - 78541002 TG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443416 2 + 26466322 TG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768173 2 + 43916225 TG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204700 2 + 75399963 TG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753637 2 - 7209941 TG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497918 2 + 3907144 TG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506843 2 - 44557958 CA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310871 2 + 6628207 CA i saiBol1.JH378225 C 0 C 0 s micMur3.chr20 54913304 2 + 72247402 TA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924183 2 + 9850184 TG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13677647 2 + 13852661 TG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445510 2 + 88915250 TG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905602 2 + 1009443 TG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e aotNan1.NW_018500622v1 9257843 325 - 10531588 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=51870.000000 s hg38.chr16_GL383557v1_alt 27051 3 + 89672 TTT s panTro5.chr16 21453104 3 - 81586097 TTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519872 3 - 90481686 TTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752821 3 + 3010529 TTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866966 3 + 163208435 TTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338183 3 - 74971481 TTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047485 3 - 78541002 TTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443418 3 + 26466322 TTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768175 3 + 43916225 TTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204702 3 + 75399963 TTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753639 3 - 7209941 TTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497920 3 + 3907144 TTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506845 3 - 44557958 TTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6310873 3 + 6628207 TTT i saiBol1.JH378225 C 0 I 316 s aotNan1.NW_018500622v1 9258168 3 - 10531588 TTT i aotNan1.NW_018500622v1 I 325 C 0 s micMur3.chr20 54913306 3 + 72247402 TTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924185 3 + 9850184 TTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13677649 3 + 13852661 TTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445512 3 + 88915250 TTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905604 3 + 1009443 TTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=36478.000000 s hg38.chr16_GL383557v1_alt 27054 3 + 89672 TCC s panTro5.chr16 21453107 3 - 81586097 TCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519875 3 - 90481686 TCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752824 3 + 3010529 TCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866969 3 + 163208435 TCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338186 3 - 74971481 TCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047488 3 - 78541002 TCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443421 3 + 26466322 TCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768178 3 + 43916225 TCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204705 3 + 75399963 TCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753642 3 - 7209941 TCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497923 3 + 3907144 TCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21506848 3 - 44557958 TCT i calJac3.chr20 C 0 I 316 s saiBol1.JH378225 6311192 3 + 6628207 TCC i saiBol1.JH378225 I 316 C 0 s aotNan1.NW_018500622v1 9258171 3 - 10531588 TCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913309 3 + 72247402 TCC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924188 2 + 9850184 T-C i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13677652 3 + 13852661 TCC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445515 3 + 88915250 TTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905607 3 + 1009443 GCC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=425375.000000 s hg38.chr16_GL383557v1_alt 27057 27 + 89672 aaaagtaaaataacatagtaatatatc s panTro5.chr16 21453110 27 - 81586097 AAAAGTAAAATAACATAGTAATATATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519878 27 - 90481686 AAAAGTAAAATAACATAGTAATATATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752827 27 + 3010529 aaaagtaaaataacatagtaatatatc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866972 27 + 163208435 aaaagtaaaataacatagtaatatatc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338189 27 - 74971481 aaaagtaaaataacatagtaatatatc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047491 27 - 78541002 aaaagtaaaataacatagtaatatatc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443424 27 + 26466322 aaaagtaaaataacatagtaatatatc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768181 27 + 43916225 aaaagtaaaataacatagtaatatatc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204708 27 + 75399963 aaaagtaaaataacatagtaatatatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753645 27 - 7209941 GAAAGTAAAATAACATAGTAATATATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497926 27 + 3907144 AAAAGTAAAATAACATAGTAATGTATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507167 27 - 44557958 AAAAGTAAAATAACATAGTAATATATC i calJac3.chr20 I 316 C 0 s saiBol1.JH378225 6311195 27 + 6628207 AAAAGTAAAATAACATAGTAATATATC i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258174 27 - 10531588 AAAAGTAAAATAACATAGCAATATATC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913312 27 + 72247402 AAAAGTAAAAAAGCATAGTAATATATC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924190 27 + 9850184 AAAAGTAAAAAAGCATAGTAATATATC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13677655 27 + 13852661 AAAACTCAAAAAGCATAGTGATACATC i otoGar3.GL873566 C 0 I 281 s canFam3.chr5 80445518 27 + 88915250 AAAAGTAAAATAACATAGTAATATACT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905610 27 + 1009443 AAAAGCAAAATAACATAGTGATATATT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=69160.000000 s hg38.chr16_GL383557v1_alt 27084 4 + 89672 aaaa s panTro5.chr16 21453137 4 - 81586097 AAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519905 4 - 90481686 AAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752854 4 + 3010529 aaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53866999 4 + 163208435 aaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338216 4 - 74971481 aaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047518 4 - 78541002 aaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443451 4 + 26466322 aaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768208 4 + 43916225 aaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204735 4 + 75399963 aaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753672 4 - 7209941 AAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497953 4 + 3907144 AAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507194 4 - 44557958 AAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311222 4 + 6628207 AAAA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258201 4 - 10531588 AAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913339 4 + 72247402 AAAA i micMur3.chr20 C 0 I 31 s proCoq1.NW_012152729v1 2924217 4 + 9850184 AAAA i proCoq1.NW_012152729v1 C 0 I 26 s otoGar3.GL873566 13677963 4 + 13852661 aaaa i otoGar3.GL873566 I 281 C 0 s canFam3.chr5 80445545 4 + 88915250 AAAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905637 4 + 1009443 AAAA i dasNov3.JH569970 C 0 I 2 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=347550.000000 s hg38.chr16_GL383557v1_alt 27088 42 + 89672 gtaaaag----CAG------TAAC---AAAAAAGTTTGGCTAGAA------------TAATTACAAA s panTro5.chr16 21453141 45 - 81586097 GTAAAAG----CAG------TAACAAAAAAAAAGTTTGGCTAGAA------------TAATTACAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519909 45 - 90481686 GTAAAAG----CAG------TAACAAAAAAAAAGTTTGGCTAGAA------------TAATTACAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752858 44 + 3010529 gtaaaag----CAG------TAAC-AAAAAAAAGTTTGGCTAGAA------------TAATTACAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867003 56 + 163208435 gtaaaag----CAG------TAAC-AAAAAAATGTTTGGCTAGAAtaattaattaattaattacaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338220 44 - 74971481 gtaaaag----CAG------TAAC-AAAAAAATGTTTGGCTAGAA------------TAATTACAAA i rheMac8.chr20 C 0 I 325 s macFas5.chr20 21047522 44 - 78541002 gtaaaag----CAG------TAAC-AAAAAAATGTTTGGCTAGAA------------TAATTACAAA i macFas5.chr20 C 0 I 363 s macNem1.NW_012011355v1 14443455 44 + 26466322 gtaaaag----CAG------TAAC-AAAAAAATGTTTGGCTAGAA------------TAATTACAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768212 44 + 43916225 gtaaaag----CAG------TAAC-AAAAAAATGTTTGGCTAGAA------------TAATTACAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204739 41 + 75399963 gtaaaag----CAG------TAAC-AAAAAAATGTTTAGCTAG---------------AATTACAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753676 44 - 7209941 GTAAAAG----CAG------TAAC-AAAAAAATGTTTGGCTAGAA------------TAATTACAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 497957 44 + 3907144 GTAAAAG----CAG------TAAC-AAAAAAATGTTTGGCTAGAA------------TAATTACAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507198 34 - 44557958 ATAAAAG----CAG------TAAC--AAAAAATGTTTGGCTAGAT------------T--------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311226 39 + 6628207 ATAAAAG----CAG------TAAC--AAAAAATGTTTGGCTAGAT------------TAG----AAA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258205 39 - 10531588 ATAAAAG----CAG------TAAC--AAAAAATGTTTGGCTAGAC------------TAG----AAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13677967 49 + 13852661 aaaaaaG----TGGAACAGCTAAC--AAAAAATGTTTGGCTAGAG------------CAATTACAGA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445549 39 + 88915250 ATGGAAG----AGC------TACC--AGAAAAAGTTTGGCTGAAA------------TTATAA---- i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 905643 46 + 1009443 GGAAAAGCTAACAA------CAAC-AAAAAAAGG--CAGCTAGAA------------TAATTCCTAA i dasNov3.JH569970 I 2 C 0 e micMur3.chr20 54913343 31 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924221 26 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=62198.000000 s hg38.chr16_GL383557v1_alt 27130 7 + 89672 AGAAAAA s panTro5.chr16 21453186 7 - 81586097 AGAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519954 7 - 90481686 AGAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752902 7 + 3010529 AGAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867059 7 + 163208435 agaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338589 7 - 74971481 AGAAAAA i rheMac8.chr20 I 325 C 0 s macFas5.chr20 21047929 7 - 78541002 AGAAAAA i macFas5.chr20 I 363 C 0 s macNem1.NW_012011355v1 14443499 7 + 26466322 AGAAAAA i macNem1.NW_012011355v1 C 0 I 394 s cerAty1.NW_011999143v1 20768256 7 + 43916225 AGAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204780 7 + 75399963 AGAAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753720 7 - 7209941 AGAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498001 7 + 3907144 AGAAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507232 5 - 44557958 AGAAA-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311265 5 + 6628207 AGAAA-- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258244 5 - 10531588 AGAAA-- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13678016 7 + 13852661 AGAAAAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445589 6 + 88915250 AGAAAA- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 905689 7 + 1009443 AGAAAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913343 31 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924221 26 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=10082.000000 s hg38.chr16_GL383557v1_alt 27137 3 + 89672 TTA s panTro5.chr16 21453193 3 - 81586097 TTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519961 3 - 90481686 TTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752909 3 + 3010529 TTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867066 3 + 163208435 tta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338596 3 - 74971481 ATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047936 3 - 78541002 ATA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20768263 3 + 43916225 ATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204787 3 + 75399963 TTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753727 3 - 7209941 ATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498008 3 + 3907144 ATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507237 1 - 44557958 --A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311270 1 + 6628207 --A i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258249 1 - 10531588 --A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13678023 3 + 13852661 TTG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445595 3 + 88915250 CTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905696 3 + 1009443 CTG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913343 31 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924221 26 + 9850184 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 14443506 394 + 26466322 I a score=52219.000000 s hg38.chr16_GL383557v1_alt 27140 4 + 89672 ATTT s panTro5.chr16 21453196 4 - 81586097 ATCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519964 4 - 90481686 ATCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752912 4 + 3010529 ATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867069 4 + 163208435 attt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338599 4 - 74971481 ATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047939 4 - 78541002 ATTT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20768266 4 + 43916225 ATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204790 4 + 75399963 ATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753730 4 - 7209941 ATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498011 4 + 3907144 ATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507238 4 - 44557958 CTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311271 4 + 6628207 ATTT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258250 4 - 10531588 ATTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913374 4 + 72247402 ATTT i micMur3.chr20 I 31 C 0 s proCoq1.NW_012152729v1 2924247 4 + 9850184 ATTT i proCoq1.NW_012152729v1 I 26 C 0 s otoGar3.GL873566 13678026 4 + 13852661 ATTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445598 4 + 88915250 ACTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905699 4 + 1009443 ATTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I e macNem1.NW_012011355v1 14443506 394 + 26466322 I a score=135251.000000 s hg38.chr16_GL383557v1_alt 27144 15 + 89672 -TTACATTACAAAACA s panTro5.chr16 21453200 13 - 81586097 -TTACATCACAAA--A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519968 13 - 90481686 -TTACATTACAAA--A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752916 15 + 3010529 -TTACATTACAAAACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867073 15 + 163208435 -ttacattaCAAAACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338603 15 - 74971481 -TTATATTACAAAACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047943 15 - 78541002 -TTATATTACAAAACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443900 15 + 26466322 -TTATATTACAAAACA i macNem1.NW_012011355v1 I 394 C 0 s cerAty1.NW_011999143v1 20768270 15 + 43916225 -TTATATTACAAAACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204794 15 + 75399963 -TTATATTACAAAACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753734 15 - 7209941 -TTATATTACAAAACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498015 15 + 3907144 -TTATATTACAAAACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507242 12 - 44557958 -TTATAT---AAAGCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311275 12 + 6628207 -TTATAT---AAAGCT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9258254 12 - 10531588 -TTATAT---AAAGCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913378 15 + 72247402 -TTACATTACAAAACA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924251 15 + 9850184 -TTACATTACAAAGCA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678030 14 + 13852661 -TTATATTACAAAGC- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445602 15 + 88915250 -TTGCATTACAAAGCA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905703 16 + 1009443 TTAAAAATTAAAAGCA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e cebCap1.NW_016107433v1 3294253 2264 - 5917169 I a score=221403.000000 s hg38.chr16_GL383557v1_alt 27159 14 + 89672 GTTTGCAGATAATG s panTro5.chr16 21453213 14 - 81586097 GTTTGCAGATAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519981 14 - 90481686 GTTTGCAGATAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752931 14 + 3010529 GTTTGCAGATAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867088 14 + 163208435 GTTTGCAGATAATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338618 14 - 74971481 GTTTGCAGATAATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047958 14 - 78541002 GTTTGCAGATAATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443915 14 + 26466322 GTTTGCAGATAATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768285 14 + 43916225 GTTTGCAGATAATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204809 14 + 75399963 GTTTGCAGATAATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753749 14 - 7209941 GTTTGCAGATAATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498030 14 + 3907144 GTTTGCAGATAATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507254 14 - 44557958 GTTTGCAGATAATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311287 14 + 6628207 GTTTTCAGATAATG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3296517 14 - 5917169 GTTTTCAGATAATG i cebCap1.NW_016107433v1 I 2264 C 0 s aotNan1.NW_018500622v1 9258266 14 - 10531588 GTTTGCAGATAATG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913393 14 + 72247402 ATTAGCAGATAGTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924266 14 + 9850184 GTTAGCAGATAATG i proCoq1.NW_012152729v1 C 0 I 213 s otoGar3.GL873566 13678044 11 + 13852661 ---AGCAGATAATG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445617 14 + 88915250 CTTAGCAGGCAATG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905719 14 + 1009443 GTTACCAGATAACA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I a score=17290.000000 s hg38.chr16_GL383557v1_alt 27173 1 + 89672 A s panTro5.chr16 21453227 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519995 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752945 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867102 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338632 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21047972 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443929 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768299 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58204823 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753763 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498044 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507268 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311301 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3296531 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258280 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913407 1 + 72247402 A i micMur3.chr20 C 0 I 229 s otoGar3.GL873566 13678055 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445631 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905733 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924280 213 + 9850184 I a score=218301.000000 s hg38.chr16_GL383557v1_alt 27174 16 + 89672 ATACAATTATTACAAG s panTro5.chr16 21453228 16 - 81586097 ATACAATTATTACAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21519996 16 - 90481686 ATACAATTATTACAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752946 16 + 3010529 ATACAATTATTACAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867103 16 + 163208435 ATACAATTATTACAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338633 16 - 74971481 ATACAATTATTACAAG i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21047973 16 - 78541002 ATACAATTATTACAAG i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14443930 16 + 26466322 ATACAATTATTACAAG i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20768300 16 + 43916225 ATACAATTATTACAAG i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58204824 16 + 75399963 ATACAATTATTACAAG i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6753764 16 - 7209941 ATACAATTATTACAAG i manLeu1.NW_012101698v1 C 0 I 1 s colAng1.NW_012123265v1 498045 16 + 3907144 ATACAATTATTACAAG i colAng1.NW_012123265v1 C 0 I 306 s calJac3.chr20 21507269 16 - 44557958 ATAAAATTATTACAAG i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6311302 16 + 6628207 ATAAAATTATTACAAG i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3296532 16 - 5917169 ATAAAATTATTACAAG i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9258281 16 - 10531588 ATAAAATTATTACAAG i aotNan1.NW_018500622v1 C 0 I 1 s otoGar3.GL873566 13678056 16 + 13852661 GTAAAATTGTTACAAG i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80445632 16 + 88915250 ATACAATTGTTACAGG i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 905734 16 + 1009443 ATGAAATTGTGACAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913408 229 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924280 213 + 9850184 I a score=216108.000000 s hg38.chr16_GL383557v1_alt 27190 23 + 89672 ATAT---------------TTCAGAA-----GTCAGTTATATT--- s panTro5.chr16 21453244 23 - 81586097 ATAT---------------TTCAGAA-----GTCAGTTATATT--- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520012 23 - 90481686 ATAT---------------TTCAGAA-----GTCAGTTATATT--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752962 23 + 3010529 ATAT---------------TTCAGAA-----GTCAGTTATATT--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867119 23 + 163208435 ATAT---------------TTCAGAA-----GTCAGTTATATT--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338650 23 - 74971481 ATAT---------------TTCAGAA-----ATCAGTTATATT--- i rheMac8.chr20 I 1 I 3 s macFas5.chr20 21047990 23 - 78541002 ATAT---------------TTCAGAA-----ATCAGTTATATT--- i macFas5.chr20 I 1 I 3 s macNem1.NW_012011355v1 14443947 23 + 26466322 ATAT---------------TTCAGAA-----ATCAGTTATATT--- i macNem1.NW_012011355v1 I 1 I 3 s cerAty1.NW_011999143v1 20768317 23 + 43916225 CTAT---------------TTCAGAA-----ATCAGTTATATT--- i cerAty1.NW_011999143v1 I 1 I 3 s chlSab2.chr5 58204841 23 + 75399963 ATAT---------------TTCAGAA-----ATCAGTTATATT--- i chlSab2.chr5 I 1 I 332 s manLeu1.NW_012101698v1 6753781 23 - 7209941 CTAT---------------TTCAGAA-----ATCAGTTATATT--- i manLeu1.NW_012101698v1 I 1 I 3 s colAng1.NW_012123265v1 498367 23 + 3907144 aTAT---------------TTCAGAA-----ATCAGTTATATT--- i colAng1.NW_012123265v1 I 306 I 3 s calJac3.chr20 21507286 23 - 44557958 ATAT---------------TTCAGAA-----GTCAGTTGtatt--- i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6311319 23 + 6628207 ATAT---------------TTCAGAA-----GTCAGTTGTATT--- i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3296549 23 - 5917169 ATAT---------------TTCAGAA-----GTCAGTTGCatt--- i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9258298 23 - 10531588 ATAT---------------TTCAGAA-----GTCAGTTGtatt--- i aotNan1.NW_018500622v1 I 1 C 0 s otoGar3.GL873566 13678073 43 + 13852661 ATATTTAATTTTTTTCACCTTTAAAATTTCCATCAACTCTATC--- i otoGar3.GL873566 I 1 I 6 s canFam3.chr5 80445649 23 + 88915250 ATAC---------------CTAAGGT-----ATCAGTTTGTTT--- i canFam3.chr5 I 1 I 2 s dasNov3.JH569970 905750 14 + 1009443 --------------------------------TTACTTTTATCatt i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913408 229 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924280 213 + 9850184 I a score=11849.000000 s hg38.chr16_GL383557v1_alt 27213 1 + 89672 A s panTro5.chr16 21453267 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520035 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752985 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867142 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338676 1 - 74971481 A i rheMac8.chr20 I 3 C 0 s macFas5.chr20 21048016 1 - 78541002 A i macFas5.chr20 I 3 C 0 s macNem1.NW_012011355v1 14443973 1 + 26466322 A i macNem1.NW_012011355v1 I 3 C 0 s cerAty1.NW_011999143v1 20768343 1 + 43916225 A i cerAty1.NW_011999143v1 I 3 C 0 s manLeu1.NW_012101698v1 6753807 1 - 7209941 A i manLeu1.NW_012101698v1 I 3 C 0 s colAng1.NW_012123265v1 498393 1 + 3907144 A i colAng1.NW_012123265v1 I 3 C 0 s calJac3.chr20 21507309 1 - 44557958 a i calJac3.chr20 C 0 I 3 s saiBol1.JH378225 6311342 1 + 6628207 A i saiBol1.JH378225 C 0 I 3 s cebCap1.NW_016107433v1 3296572 1 - 5917169 a i cebCap1.NW_016107433v1 C 0 I 3 s aotNan1.NW_018500622v1 9258321 1 - 10531588 a i aotNan1.NW_018500622v1 C 0 I 322 s otoGar3.GL873566 13678122 1 + 13852661 A i otoGar3.GL873566 I 6 C 0 s canFam3.chr5 80445674 1 + 88915250 G i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 905764 1 + 1009443 a i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913408 229 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924280 213 + 9850184 I e chlSab2.chr5 58204864 332 + 75399963 I a score=50869.000000 s hg38.chr16_GL383557v1_alt 27214 12 + 89672 CTAATAAAATAT s panTro5.chr16 21453268 12 - 81586097 CTAATAAAATAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520036 12 - 90481686 CTAATAAAATAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752986 12 + 3010529 CTAATAAAATAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867143 12 + 163208435 CTAATAAAATAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338677 10 - 74971481 TTACTAATAT-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048017 10 - 78541002 TTACTAATAT-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443974 10 + 26466322 TTACTAATAT-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768344 10 + 43916225 TTACTAATAT-- i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6753808 10 - 7209941 TTACTAATAT-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498394 10 + 3907144 TTACTAATAC-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507313 12 - 44557958 ctaataaagtat i calJac3.chr20 I 3 I 310 s saiBol1.JH378225 6311346 12 + 6628207 CTAATGAAGtat i saiBol1.JH378225 I 3 I 299 s cebCap1.NW_016107433v1 3296576 12 - 5917169 ctaataaagtat i cebCap1.NW_016107433v1 I 3 I 316 s otoGar3.GL873566 13678123 12 + 13852661 CTAATAAAACAG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445675 12 + 88915250 CTAATAACACAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905765 12 + 1009443 ttaataaaacat i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913408 229 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924280 213 + 9850184 I e aotNan1.NW_018500622v1 9258322 322 - 10531588 I e chlSab2.chr5 58204864 332 + 75399963 I a score=1536739.000000 s hg38.chr16_GL383557v1_alt 27226 132 + 89672 TTAAACTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-GCTTGTTCCAGTCTTTGCTCTCTAGACATGCCTTTCCC-CTCTAAACATGC s panTro5.chr16 21453280 132 - 81586097 TTAAACTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-GCTTGTTCCAGTCTTTGCTCTCTAGACATGCCTTTCCC-CTCTAAACATGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520048 132 - 90481686 TTAAACTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-GCTTGTTCCAGTCTTTGCTCTCCAGACATGCCTTTCCC-CTCTAAACATGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 752998 131 + 3010529 TTAAACTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGC-ATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-GCTTGTTCCAGTCTTTGCTCTCTAGACATGCCTTTCCC-CTCTAAACATGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867155 132 + 163208435 TTAAATTATTTTTAAAA----AAGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-GCTTGTTCCAGTCTTTGCTCTCTAGACATGCCTTTCCC-CTCTAAACATGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338687 132 - 74971481 TTAAATTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-ACTTGTTCCAGTCTTTGCTCTCTAGACACGCCCTTCCC-CTCTAAACATGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048027 132 - 78541002 TTAAATTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-ACTTGTTCCAGTCTTTGCTCTCTAGACACGCCCTTCCC-CTCTAAACATGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14443984 132 + 26466322 TTAAATTATTTTTAAAA----AGAGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-ACTTGTTCCAGTCTTTGCTCTCTAGACACGCCCTTCCC-CTCTAAACATGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768354 132 + 43916225 TTAAATTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-ACTTGTTCCAGTCTTTGCTCTCTAGACATGCCCTTCCC-CTCTAAACATGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205196 130 + 75399963 TTAAATTATTTTTTAAA----AGGGGTA--CGGAGCCTTGAAAATGGGCTATTTCATCAA------------A--TGTTTGCTGAAGTTTGAACATCACT-ACTTGTTCCAGTCTTCGCTCTCTAGACATGCCCTTCCC-CTCTAAACATGC i chlSab2.chr5 I 332 C 0 s manLeu1.NW_012101698v1 6753818 132 - 7209941 TTAAATTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAAAATGGGCTATTTCATCAA------------ATCTGTTTGCTGAAGTTTGAACATCACT-ACTTGTTCCAGTCTTTGCTCTCTAGACATGCCCTTCCC-CTCTAAACATGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498404 129 + 3907144 TTAAATTATTTTTAAAA----AGGGGTA--CAGAGCCTTGAGAATGGGCTATTTCATCAA------------ATTTGTT---TGAAGTTTGAACATCACT-GCTTGTTCCAGTCTTTGCTCTCTAGACAAGCCCTTCCC-CTCTAAACATGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507635 144 - 44557958 ttaaattatttttaaaa----aGAAGTA--CAGAGCCCTGAAAATCAGCAATTTCATTAATAGCTGATTAATTTCTGCTTGCTGAAATTTGAACATCACT-GCTTGTTCCACTCTTTGCTCTCTAGATATGCCCTTCCC-CTCTAAACATAT i calJac3.chr20 I 310 C 0 s saiBol1.JH378225 6311657 131 + 6628207 ttaaattatttttaaaa----aGGGGTA--CAGAGCCTTGAAAATCAGCTATTTCATTAA------------ATCTGTTTGCTGAAATTTGAACATCACT-ACTTGTTTCACTCTTTGCTCTCTAGACATGCCCTTCCC-CTC-AAACATAC i saiBol1.JH378225 I 299 C 0 s cebCap1.NW_016107433v1 3296904 132 - 5917169 ttaaattatttttaAAA----ATGGATA--CAGAGCCTTCAAAATCAGCTATTTCATTAA------------ATCTGTTTGCTGAAATTTGAACATCACT-GCTTGTTCCATTCTTTGCTCTTTAGACATGACTTTCCC-CTCAAAACATAC i cebCap1.NW_016107433v1 I 316 C 0 s aotNan1.NW_018500622v1 9258644 132 - 10531588 ttaaattatttttaAAA----AGGGGTA--CAGAGCCTTGAAAATCAGCTATTTCATTAA------------ATCTGTTTGCTGAAATTTGAACATCACT-GATTGTTCCACTCTTTGCTCTCTAGACATGCCCTTCCC-CTCTAAACATAC i aotNan1.NW_018500622v1 I 322 C 0 s otoGar3.GL873566 13678135 127 + 13852661 TTAAGTTAGTTTTAAAA----GTCAGTATCCAAAGTCTTGAAAATAGGCTATTTCATCAA------------ATGTGTTTGCTAGAGTTTAAACATCACTAGCTTATTCTCATCTTTGCCCCTTGGGCATGCCTCTCCC-CTCT-------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445687 123 + 88915250 ---GAAAATTATTAAAAAGTCAGGGCTT--CAGAATCCTGAAAATCAGCTATTTCATCAA------------GTGTGTTTGCTGGA--TTGAGCATCACTTGCTCGTTCCTGCCTTTG-------GACATGCCGTTTTT-CAGTTGATTT-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 905777 128 + 1009443 -taaa--attaataaGT----CAAGCTC--CAGAGTCTTAAAAATTGGC--ATTCACCAA------------ACATATTTGCTAGAGTTTGAAAATCACTTGCTTGTTACCATCTTTGCCCTGTAGACATGCCATTCCCTCACAAAGAATA- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913408 229 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I e proCoq1.NW_012152729v1 2924280 213 + 9850184 I a score=1363017.000000 s hg38.chr16_GL383557v1_alt 27358 92 + 89672 CCT--CCATCCTTCCCACCACCCACACCTATTCCATGTCCCACCCTTCTCTCACTTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC s panTro5.chr16 21453412 92 - 81586097 CCT--CCATCCTTCCCACCACCCACACCTATTCCATGTCCCACCCTTCTCTCACTTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520180 92 - 90481686 CCT--CCATCCTTCCCACCACCCACACCTATTCCATGTCCCACCCTTCTCTCACTTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753129 92 + 3010529 CCT--CCATCCTTCCCACCACCCACATCTATTCCATGTCCCACCCTTCTCTCACTTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867287 92 + 163208435 CCT--CCATCCTTCCCACCTCCCACACCTATTCCATGTCCCACCCTTCTCTCACCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338819 92 - 74971481 CCT--CCATCCTTCCCACTTCCCACACCTATTCCATGTCCCGCCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048159 92 - 78541002 CCT--CCATCCTTCCCACTTCCCACACCTATTCCATGTCCCGCCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444116 92 + 26466322 CCT--CCATCCTTCCCACTTCCCACACCTATTCCATGTCCCGCCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768486 92 + 43916225 CCT--CCATCCTTCCCACTTCCCACACCTATTCCATGTCTCGCCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205326 92 + 75399963 CCT--CCATCCTTCCCACTTCCCACACCTATTCCATGTCCCACCCTTCTCTCACCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6753950 92 - 7209941 CCT--CCATCCTTCCCACTTTCCACACCTATTCCATGTCCCGCCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTCACTTATTCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498533 92 + 3907144 CCT--CCATTCTTCCCATCTCCCACACCTATTCCATGTCCCACCCTTCTCTCACGTGACCCAAAATACATTCC---TATTACTTGCTCACTTATTCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507779 87 - 44557958 CCT--CCATCCTTCCCACCTCTTACACCTATTCCATG-----ACCTTCTCTCACCTGACCCAAAATACATTCC---TACTACTTGCTCATTTATTCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311788 91 + 6628207 CCT--CCATCCTTCCCACCTCCTACACCTATTCCATGT-CGACCCTTCTCTCATCTGACCCAGAATACATTCC---TACTACTTGCTCATTTATTCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297036 92 - 5917169 GCT--CCATCCTTCCCACCTCCTACACCTATTCCATGTCCCACCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTTATTTATTCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258776 94 - 10531588 CCTCCCCATCCTTCCCACCTCCTATACCTATTCCATGTCCCACCCTTCTCTCATCTGACCCAAAATACATTCC---TACTACTTGCTCATTTATTCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913637 95 + 72247402 CCT--CCATCTTCCCCACCTCCCACCCACATTCCATGTTCCACCTTTCTCTCATCTGACCCAAAATACATTCCCAACACTACTTGCTCCTTTATTCC i micMur3.chr20 I 229 C 0 s proCoq1.NW_012152729v1 2924493 95 + 9850184 CCT--CCATCTTCCCCACCTCCCACACACATTACATGTTCCACCTTTCTCTCATCTGACCCAAAATATATTCCCAACACTACTTGCTCCTTTATTCC i proCoq1.NW_012152729v1 I 213 C 0 s otoGar3.GL873566 13678262 92 + 13852661 -----CCATCTTCCCCACCTCCCATCCCCATTCTACAGTCCACCTTTCTGTCATCTGACCCAAGATACATTCCCAACACTACTCAATCCTTTATTCC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80445810 76 + 88915250 ----------TTCAGTACCTCCCACCCTCACTCCG-----------TCTTTCACCTGACCCAAAACATATTCTTAACATCAGTTGCATCCTTATTCC i canFam3.chr5 C 0 I 358 s dasNov3.JH569970 905905 94 + 1009443 TCT--ACATCTTCCCCACCTTCTATCCCAATTACATGTCCTGCCCTTCTTTCATCTGCCCCAAAACACATTCCTAATATTACTTGCTC-TTTACTCC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I a score=246836.000000 s hg38.chr16_GL383557v1_alt 27450 15 + 89672 AAGTTCTCTCAGCAT s panTro5.chr16 21453504 15 - 81586097 AAGTTCTCTCAGCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520272 15 - 90481686 AAGTTCTCTCAGCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753221 15 + 3010529 AAGTTCTCTCAGCAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867379 15 + 163208435 AAGTTCTCTCAGCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338911 15 - 74971481 AAGTTCTCTCAGCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048251 15 - 78541002 AAGTTCTCTCAGCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444208 15 + 26466322 AAGTTCTCTCAGCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768578 15 + 43916225 AAGTTCTCTCAGCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205418 15 + 75399963 AAGTTCTCTCAGCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754042 15 - 7209941 AAGTTCTCTCAGCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498625 15 + 3907144 AAGTTCTCTTAGCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507866 15 - 44557958 AACTTCTCTCAGCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311879 15 + 6628207 AATTTCTCTCAGCAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297128 15 - 5917169 AATTTCTCTCAGCAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258870 15 - 10531588 AATTTCTCTCAGCAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54913732 15 + 72247402 AAGCTCTCTCGGCAT i micMur3.chr20 C 0 I 426 s proCoq1.NW_012152729v1 2924588 15 + 9850184 AAGCTCTGTCAGCAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678354 13 + 13852661 AAACTT--TCAGCAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80446244 15 + 88915250 AAGTTCTTTCAGCAT i canFam3.chr5 I 358 C 0 s dasNov3.JH569970 905999 15 + 1009443 AAGTTCTCTCAGCAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I a score=447281.000000 s hg38.chr16_GL383557v1_alt 27465 30 + 89672 TTGTCTACCACTTATAATGTATGAAATACT s panTro5.chr16 21453519 30 - 81586097 TTGTCTACCACTTATAATGTATGAAATACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520287 30 - 90481686 TTGTCTACCACTTATAATGTATGAAATACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753236 30 + 3010529 TTGTCTACCACTTATAATGTATGAAATACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867394 30 + 163208435 TTGTCTACCACTTATGATGTATGAAATACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338926 30 - 74971481 TTGTCTACCACTTATAATGTATGAAATACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048266 30 - 78541002 TTGTCTACCACTTATAATGTATGAAATACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444223 30 + 26466322 TTGTCTACCACTTATAATGTATGAAATACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768593 30 + 43916225 TTGTCTACCACTTATAATGTATGAAATACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205433 30 + 75399963 TTGTCTACCACTTATAATGTATGAAATACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754057 30 - 7209941 TTGTCTACCACTTATAATGTATGAAATACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498640 30 + 3907144 TTGTCTACCACTTATAATGTATGAAATACT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507881 30 - 44557958 TTGTCTACCACTTGTAATGTATGAAATACT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311894 30 + 6628207 TTGTCTACCACTTGTAATGTATGAAATACT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297143 30 - 5917169 TTGTCTACCACTTGTAATGTATGAAATACT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258885 30 - 10531588 TTGTCTACCACTTGTAATGTATGAAATACT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2924603 26 + 9850184 ----GTATCACTTGTAATGTATGAAATAAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678367 21 + 13852661 ----CTATCACT-----TATATGAAATAAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80446259 30 + 88915250 TTGTCTACCGCTTGTAATGTATGAAATAAT i canFam3.chr5 C 0 I 189 s dasNov3.JH569970 906014 30 + 1009443 TTGTCTATCACTAGTAATATATGAAATAAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54913747 426 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I a score=654653.000000 s hg38.chr16_GL383557v1_alt 27495 49 + 89672 TTGGATTCACTTATGTGCAGTT--TATTAGTATTTACAAACCCATTTTGGG s panTro5.chr16 21453549 49 - 81586097 TTGGATTCACTTATATGCAGTT--TATTAGTATTTACAAACCCATTTTGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520317 49 - 90481686 TTGGATTCACTTATATGCAGTT--TATTAGTATTTACAAACCCATTTTGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753266 49 + 3010529 TTGGATTCACTTATGTGCAGTT--TATTAGTATTTACAAACCCATTTTGGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867424 49 + 163208435 TTGAATTCACTTATGTGCAGTT--TATTAGTATTTACAAACCCATTTTGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21338956 49 - 74971481 TTGAATTCACTTATGTGTAGTT--TATTAGTATTTATAAACCCATTTTGGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048296 49 - 78541002 TTGAATTCACTTATGTGTAGTT--TATTAGTATTTATAAACCCATTTTGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444253 49 + 26466322 TTGAATTCACTTATGTATAGTT--TATTAGTATTTATAAACCCATTTTGGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768623 49 + 43916225 TTGAATTCACTTATGTGTAGTT--TATTAGTATTTATAAACCCATTTTGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205463 49 + 75399963 TTGGATTCACTTATGTGTACTT--TATTAGTATTTATAAACCCATTTTGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754087 49 - 7209941 TTGAATTCACTTATGTGTAGTT--TATTAGTATTTATAAACCCATTTTGGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498670 49 + 3907144 TTGGATTCACTTATGTGTAGTT--TATTAGTATTTATAAACCCATTTTGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507911 49 - 44557958 TTGGATTCACTTATGTGCAATT--TATTAGTATTTACAAACATATTTTGGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311924 49 + 6628207 TTGGATTCACTTATGTGCAATT--TATTAGTATTTACAAACCCATTTTGGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297173 49 - 5917169 TTGGATTCACTTATGTGTAATT--TATTAGTATTTACAAACTCATTTTGGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258915 49 - 10531588 TTGGATTCACTTATGTGCAATT--TATTAGTATTTACAAACCCATTTTGGG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2924629 51 + 9850184 CTGGATTCATTTATATGCAgtttatattagtcttcataaacctattttagg i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678388 49 + 13852661 TTGAATTCATTTATATGCCGTT--TATTAGTCTTTATAAACCTACTTGGGG i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 906044 49 + 1009443 TTGGATTCATTTATACATAATT--CATTAGTGGTCATAAACCCATTTCCAG i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80446289 189 + 88915250 I e micMur3.chr20 54913747 426 + 72247402 I e mm10.chr8 22449864 734 - 129401213 I a score=99153.000000 s hg38.chr16_GL383557v1_alt 27544 8 + 89672 TACTTCTT s panTro5.chr16 21453598 8 - 81586097 TACTTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520366 8 - 90481686 TACTTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753315 8 + 3010529 TACTTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867473 8 + 163208435 TAATTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339005 8 - 74971481 TACTTCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048345 8 - 78541002 TACTTCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444302 8 + 26466322 TACTTCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768672 8 + 43916225 TACTTCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205512 8 + 75399963 TACTTCCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754136 8 - 7209941 TGCTTCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498719 8 + 3907144 TACTTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507960 7 - 44557958 TACTTCT- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311973 8 + 6628207 TACTTTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297222 8 - 5917169 TACTTCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258964 8 - 10531588 TACTTCTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54914173 8 + 72247402 TActtctt i micMur3.chr20 I 426 C 0 s proCoq1.NW_012152729v1 2924680 8 + 9850184 tacttctt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678437 8 + 13852661 TACTTCTT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 906093 8 + 1009443 TCCTCCTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80446289 189 + 88915250 I e mm10.chr8 22449864 734 - 129401213 I a score=957038.000000 s hg38.chr16_GL383557v1_alt 27552 63 + 89672 AAAAGTAAAATCTTTGGGGCTTACATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT s panTro5.chr16 21453606 63 - 81586097 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520374 63 - 90481686 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753323 63 + 3010529 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867481 63 + 163208435 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339013 63 - 74971481 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048353 63 - 78541002 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444310 63 + 26466322 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768680 63 + 43916225 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205520 63 + 75399963 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754144 63 - 7209941 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTGTAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498727 59 + 3907144 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCTCTCAGAGTGTCT-AACAGAGTG----T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21507967 58 - 44557958 -----TAAAATCTTTGGGGCTTACATATTCT----ATTTCCCTCAGAGTGTCT-AATAGAGTGTAGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6311981 63 + 6628207 AAAAGTAAAATCTTTGGGGCTTATATATTCT----ATTTCCCTCAGAGTGTCT-AACAGAGTTTAGTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297230 63 - 5917169 AAAAGTAAAATCTTTGGGACTTATATATTCT----ACTTCCCTCAGAGTATCT-AACAGAGTGTAGTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9258972 63 - 10531588 AAAAGTAAAATCTTCGGGGTTCATATATTCT----ATTTCCCTCAGAGTGTCT-AACAGAGTGTAGTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54914181 64 + 72247402 aaaagtagaatctatagggctcatgttttct----atttctcccagagtgcctaagcagagtgcAGGC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924688 63 + 9850184 aaaagtaagatctatagggctcatgttttct----atttttcccagagtgcct-agcagagtgcaggc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678445 63 + 13852661 AAAAGTAGGATCTATGAAGCTTATGTTTTCT----ATTTCTCTCAGTTTGCCT-AGCAGAGTGCAGGC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80446478 67 + 88915250 aaaaGTAGGGCCTGAGAGGCTCATATTTTCTCTCCATCTATCCCGGAGTGCCT-AGCAGGTTGTGGAC i canFam3.chr5 I 189 C 0 s dasNov3.JH569970 906101 67 + 1009443 AAAAGTAGGGCCTGTGGGGCTCATATTTTCTTTCCATTTCTCCGAGAGTGCCT-AGCAGAGCATGGAC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22449864 734 - 129401213 I a score=591031.000000 s hg38.chr16_GL383557v1_alt 27615 46 + 89672 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGCAT-G s panTro5.chr16 21453669 46 - 81586097 ATTCAATATGAGT------------TGATTACTTACA-T-ACAG------CTTTAGGT-CCAGCAT-G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520437 46 - 90481686 ATTCAATATGAGT------------TGATTACTTACA-T-ACAG------CTTTAGGT-CCAGCAT-G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753386 46 + 3010529 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGCAT-G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867544 46 + 163208435 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGCAT-G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339076 47 - 74971481 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGTATGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048416 46 - 78541002 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGTAT-G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444373 46 + 26466322 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGTAT-G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768743 45 + 43916225 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGTAT-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205583 45 + 75399963 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGTAT-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754207 45 - 7209941 ATTCAATATGAGT------------TGATTAATTACA-T-ACAG------CTTTAGGT-CCAGTAT-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498786 45 + 3907144 ATTCAATATGAGT------------TGATTAATTACA-G-ACAG------CTTTAGGT-CCAGTAC-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508025 46 - 44557958 ATTCAATATGAGT------------TGATTAATTACA-T-ATAG------CTTTGGAT-CCAGCAT-G i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6312044 46 + 6628207 ATTCAATAGAAGT------------TAATTAATTACA-T-ACAG------CTTTGGAT-CCAGCAT-G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297293 46 - 5917169 ATTCAATATGAGT------------TGATTAATTACA-C-TCAG------CTTTGGAT-CCAGCAT-G i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259035 36 - 10531588 ATTCA----------------------ATTAACTACA-T-ACAG------CTTTGGAT-CCAGCAT-G i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54914245 47 + 72247402 ATTCAATGTAAGT------------GGATTCATCACA-TAACAG------CTTTGTGT-CCATCAT-G i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924751 59 + 9850184 gttcaatGTAAGTGGATTCATCACCGGATTCATCACG-TAACAG------CTTTGTGT-CCATCGT-G i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678508 48 + 13852661 ATTCACTAGGAGT------------TGACTCATGACATTAACAG------CTTTGTAT-CCATCAT-G i otoGar3.GL873566 C 0 I 102 s mm10.chr8 22450598 46 - 129401213 ACTCAATATAAGG------------TGATTAACTACA-T-GCTG------TTTGAGGG-CCTGCAG-A i mm10.chr8 I 734 C 0 s canFam3.chr5 80446545 46 + 88915250 ATTCA-TATGAGC------------TGATTACTCTCA-T-ACAG------CTATTTGTGCCAGCAT-G i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 906168 52 + 1009443 ATTGAATATGAGT------------TGATTAATTACA-T-ACAGCTATCTCTCTGTGC-CCTGTAC-G i dasNov3.JH569970 C 0 C 0 a score=84716.000000 s hg38.chr16_GL383557v1_alt 27661 16 + 89672 A-----------AAAAA-AAAAAT-----GAGG s panTro5.chr16 21453715 16 - 81586097 A-----------AAAAA-AAAAAT-----GAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520483 16 - 90481686 A-----------AAAAA-AAAAAT-----GAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753432 15 + 3010529 ------------AAAAA-AAAAAT-----GAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867590 14 + 163208435 -------------AAAA-AAAAAT-----GAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339123 16 - 74971481 A-----------AAAAA-AAAAAT-----GAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048462 16 - 78541002 A-----------AAAAA-AAAAAT-----GAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444419 16 + 26466322 A-----------AAAAA-AAAAAT-----GAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768788 16 + 43916225 G-----------AAAAA-AAAAAT-----GAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205628 16 + 75399963 G-----------AAAAA-AAAAAT-----GAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754252 16 - 7209941 G-----------AAAAA-AAAAAT-----GAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498831 15 + 3907144 ------------GAAAA-AAAAAT-----GAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508071 14 - 44557958 G-------------AAA-AAAAAC-----AAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6312090 27 + 6628207 Gaaaaaaaaaaaaaaaa-aaaaac-----aaat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297339 13 - 5917169 G--------------AA-AAAAAC-----AAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259071 14 - 10531588 G-------------AAA-AAAAAT-----GAGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54914292 12 + 72247402 ------------------AAAAAC---CAGAGA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924810 12 + 9850184 ------------------AAAAAC---CAGAGA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678658 21 + 13852661 ------------aaaaaaaAAAACAAATAGAGA i otoGar3.GL873566 I 102 C 0 s mm10.chr8 22450644 16 - 129401213 -----------TAAAAA-TAGTTT-----AAGG i mm10.chr8 C 0 I 944 s canFam3.chr5 80446591 12 + 88915250 ---------------AA-AAATCC-----TAGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 906220 12 + 1009443 ---------------AA-AAATCA-----GAGG i dasNov3.JH569970 C 0 C 0 a score=2266675.000000 s hg38.chr16_GL383557v1_alt 27677 130 + 89672 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCT----GTCTTTAGACTTGCTAGCTTCTTAA s panTro5.chr16 21453731 134 - 81586097 AAAAGACTGGGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGTATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTGTTAGTCTTTAGACTTGCTAGCTTCTTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520499 134 - 90481686 AAAAGACTGGGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGTATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTGTTAGTCTTTAGACTTGCTAGCTTCTTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753447 134 + 3010529 AAAAGACTGGGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAACCATAACAATAAATCCTGTTAGTCTTTAGACTTGCTAGCTTCTTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867604 134 + 163208435 AAAAGACTGGGAGACATTAACCGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTGTTAGTCTTTAGACTTGCTAGCTTCTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339139 134 - 74971481 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTATTAGTCTTTAGACTTGCTAGCTTCTTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048478 134 - 78541002 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTATTAGTCTTTAGACTTGCTAGCTTCTTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444435 134 + 26466322 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTATTAGTCTTTAGACTTGCTAGCTTCTTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768804 134 + 43916225 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTATTAGTCTTTAGACTTGCTAGCTTCTTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205644 134 + 75399963 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTATTAGTCTTGAGACTTGCTAGCTTCTTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754268 134 - 7209941 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTATTAGTCTTTAGACTTGCTAGCTTCTTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498846 134 + 3907144 AAAAGACTGAGAGACATTAACTGGATAACCTCCAGATAGATGCAACAACACAGAATCCAAAGCACAATTTTCCTGAAAATTAAGCCAATCATAACAATAAATCCTGTTAGTCTTTAGACTTGCTAGCTTCTTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508085 134 - 44557958 AAAAGACTGGGAGACATTAACCGGATAACCTCCAGACAGATGCAACAATACAGAATCCAGAGCACAATTTTCCTGAATATTAAGCCAATCATAACAACAAATCCTGTTAGTCATTAGACTTGCTAGCTTCTTAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6312117 134 + 6628207 aaaaGACTGGGAGACATTAACTGGATAACCTCCAGGCAGATGCAACAACACAGAATCCAGAGTACAATTTTCCTGAATATTAAGACAATCATAACAATAAATCCTGTTAGTCTTTAGACTCGCTAGCTTCTTAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297352 134 - 5917169 AAAAGACTGGGAGACATTAACTGGATAACCTCCAGACAGATGCAACAACACAGAATCCAGAGCACAATTTTCCTGAAGATTAAGCCAATCATAACAATAAATCCTGTTAGTCTTTAGACTCGCTAGCTTCTTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259085 134 - 10531588 AAAAGACTGGGAGACATTAACCGGATAACCTCCAGACCGATGCAACAACACAGAATCCAGAGCACAATTTTCCTGAATATTAAGCCAATCATCACAATAAATCCTGTTAGTCTGTAGACTCGCTAGATTCTTAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54914304 131 + 72247402 CAAAGACTGGGAGACATTACATGGATGACCTATAGACAGATG---CAACACAGAATCCAGAGCACAATTTTCCTGAACATTAAGCCAATCATAACAATAAATCCTGCTAGTCTTTAGACTTGCTAGCTTCTTAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2924822 134 + 9850184 CAAAGCCTGGGAGACATTACATGGATAACCTCCAGACAGATGCAACAACACAGAATCCAGAGCACAATTTTCCTGAACATTAAGCTAATCATAACAATAAATCCTGTTAATCTTTAGACTTCCTAGTTTCTTAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678679 134 + 13852661 CAAAGACTTGGAAACATTACATGGATGACCTCCAGACAGATGCAACAACACAGAATCCAGAGCACAATTTTCCTGAACATTAAGCCAATCATAACAGTAAGTCCTGTTAGTCTTCAGACTTGCCAGTTTCTTAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80446603 128 + 88915250 CACAGATGAGGAGACATTAAC---AAAAACCTCAGACAGATGCAACA--ACAGAATTCAGAGCACAG-TTTCCCATACATTAAGCCAATCATAACAATAAATCCTGATGGTCTTTAGATTTGCTAGCTTCTTAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 906232 133 + 1009443 CAAAGACTGAGAAACATTAATGGGATAACCTCTAGACAGATGCAACAACACAGAATCCAGAGCACAA-TTTCCTACACATTAAGCCAATCATGATAATAAATCCTGTTAGTCTTTAGACTTGCTAGCTTTTTAA i dasNov3.JH569970 C 0 I 3461 e mm10.chr8 22450660 944 - 129401213 I a score=2780452.000000 s hg38.chr16_GL383557v1_alt 27807 209 + 89672 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaggctgtgtagtttgataaatctgagt-aactaatcttgcctctat-cacctacaaattctataaccttgcac--tgactgtttaatct-tccaggactcaatttatttatattttatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt s panTro5.chr16 21453865 209 - 81586097 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaggctgtgtagtttgataaatctgagt-aactaatcttgcctctat-cacctacaaattctataaccttgcac--tgactgtttaatct-tccaggactcaatttatttatattttatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520633 209 - 90481686 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaggctgtgtagtttgataaatctgagt-aactaatcttgcctctat-cacctacaaattctataaccttgcac--tgactgtttaatct-tccaggactcaatttatttatattttatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753581 208 + 3010529 CCCAAACTGATCCACc-------------agagaggcagtctgttataatggttaat-atcaaaggctttgtagtttgat-aatctgagt-aactaatcttgcctctat-cacctacaaattctataaccttgcac--tgactgtttaatct-tccaggactcaatttatttatattttatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867738 209 + 163208435 CCCAAACTGATCTACc-------------acagaggcagtctattataatggttaat-atcaaaggctgtgtagtttgataaatctgagt-aactaatcctgcctctat-cacctacaaattctataaccttgcac--tgactgtttaatct-tccaggactcaatttatttatattttatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339273 205 - 74971481 CCCAAACTGATCCACc-------------agagaggcagtctattataatagttaat-atcaaaggctgtgtagtttgataaatctgag-----taatcttgcctctatccacctacaaattctataaccttgcac---gattatttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048612 205 - 78541002 CCCAAACTGATCCACc-------------agagaggcagtctattataatagttaat-atcaaaggctgtgtagtttgataaatctgag-----taatcttgcctctatccacctacaaattctataaccttgcac---gattatttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444569 205 + 26466322 CCCAAACTGATCCACc-------------agagaggcagtctattataatagttaat-atcaaaggctgtgtagtttgataaatctgag-----taatcttgcctctatccacctacaaattctataaccttgcac---gattatttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20768938 205 + 43916225 CCCAAACTGATCCACc-------------agagaggcagtctattataatacttaat-atcaaaggctgtgtagtttgataaatctgag-----taatcttgcctctatccacctacaaattctataaccttgcac---gattgtttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205778 206 + 75399963 CCCAAACTGATCCACc-------------agagaggcagtctattataatagttaat-atcaaaggctgtgtagtttgataaatctgag-----taatcttgcctctattcacctacaaattctataaccttgcac--tgattgtttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754402 205 - 7209941 CCCAAACTGATCCACc-------------agagaggcagtctattataatacttaat-atcaaaggctgtgtagtttgataaatttgag-----taatcttgcctctatccacctacaaattctataaccttgcac---gattgtttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 498980 202 + 3907144 CCCAAACTGATCCACc-------------agagaggcagtctattataatagttaat-atcaaaggctgtgtagtttg------ctgag-----taatcttgcctctatccacctacaaattctataaccttgcacacttattgtttaatct-tccaggactcaatttctttatatttcatatggggatgatgccacctgactcacagggc----------tgttaaaagaataagtt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508219 208 - 44557958 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaggctgtgtagtttgataaatctgagt-aactaatcttgcctctat-cacctacaaatggtatggccttgcac--tgattgtttaatct-tccaggcttcaatttctttatattttaaatggagatgatg-cacctgactcacagggc----------tgttaaaagaataagct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6312251 207 + 6628207 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaagctgtgtagtttgataaatctga-t-aactaatcttgcctctat-cacctacaaatggcatggccttgcac--tgattgtttaatct-tccaggactcaatttctttatattttaaatggagacgatg-caactgactcacagggc----------tgttaaaataaaaagtt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3297486 208 - 5917169 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaggctatgtagtttgataaatctaagt-aactaatcttgcctctat-cacctacaaatggcatggccttgcac--tgattgtttaatct-tccaggactcaatttctttacattttaaatggggatgatg-cacctgagtcacagggc----------tgttaaaagaataagtt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259219 208 - 10531588 CCCAAACTGATCCACc-------------agagaggcagtctattataatggttaat-atcaaaggctgtgtagtttgataaatctgagt-aactaatcttgcctctat-cacgtacaaatggtatggccttgcac--tgattgtttaatct-tccaggactcaatttctttatattttaaatggggatgatg-cacctgactcacagggc----------tgttaaaagaataagtt i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54914435 209 + 72247402 CCCAAACTGATCCACc-------------agagaggcagtgtattataatggttaat-actaaaagctatggagtccaataaatcagagc-aactaatcctgcctctac-cacctgcaaatgctgtgaccttgggc--aaattatttaatct-tccagggctcgatgtcttcatatttaaaatggggatgatgccacatgactcacagggc----------tgttgaaagaataagtt i micMur3.chr20 C 0 I 900 s proCoq1.NW_012152729v1 2924956 222 + 9850184 CCCAAACTGATCTACCAGAGATCCACCAGagagaggcagtctatcataatggttaat-aacaaaaactgtggagtccaataaatctgagc-aactaatcttgcctctac-cacctgcaaacgctgtgaccttggga--aaattacttaatct-tccagagctcgatttcttcatatttaaaatggggatgatgccacgtgactcacagagc----------tgttgaaagaataagtt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13678813 199 + 13852661 CCCAAACTAATCCACC-------------AGAGAGGAGGTCTATT----TGGTTAAT-ACCAAAAGCTGTAGAATCCAATAAATCTGAGTAAACTAATCTTGCCTTTTC-CACCCACAAATg-------------------ttatttaatct-tctagaactcaatttcctcatatttaaaatggggattatgccatatgactcacagagccataaaagaatgttaaaagaataagct i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80446731 196 + 88915250 CCTAAATAGATCCATC-------------AAAGAAGGAGTCTATCATAATGATAAATAACcaagaggtgtggagtctgataaatctgaat-aa-ttacctagcctctat-cacc--caagtactgtaaccatggac--aaattatttaatctctccaggtctcaatttcttcacatt------------gattatatctgcctcacaggga----------tgttaaaagaataaatt i canFam3.chr5 C 0 C 0 e mm10.chr8 22450660 944 - 129401213 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=49761.000000 s hg38.chr16_GL383557v1_alt 28016 3 + 89672 gtg s panTro5.chr16 21454074 3 - 81586097 gtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520842 3 - 90481686 gtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753789 3 + 3010529 gtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867947 3 + 163208435 gtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339478 3 - 74971481 gtg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048817 3 - 78541002 gtg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444774 3 + 26466322 gtg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769143 3 + 43916225 gtg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205984 3 + 75399963 gtg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754607 3 - 7209941 gtg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499182 3 + 3907144 gtg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508427 3 - 44557958 gtg i calJac3.chr20 C 0 I 19 s saiBol1.JH378225 6312458 3 + 6628207 gtg i saiBol1.JH378225 C 0 I 50 s cebCap1.NW_016107433v1 3297694 3 - 5917169 gtg i cebCap1.NW_016107433v1 C 0 I 8 s aotNan1.NW_018500622v1 9259427 3 - 10531588 gtg i aotNan1.NW_018500622v1 C 0 I 8 s proCoq1.NW_012152729v1 2925178 3 + 9850184 gtg i proCoq1.NW_012152729v1 C 0 I 123 s otoGar3.GL873566 13679012 3 + 13852661 gtg i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80446927 3 + 88915250 gtg i canFam3.chr5 C 0 I 230 e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22450660 944 - 129401213 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=77130.000000 s hg38.chr16_GL383557v1_alt 28019 11 + 89672 gccaggtgcgg s panTro5.chr16 21454077 11 - 81586097 gccaggtgcgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520845 11 - 90481686 gccaggtgcgg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753792 11 + 3010529 gccaggtgcgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867950 11 + 163208435 gccaggcacag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339481 11 - 74971481 gccgggcgcag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048820 11 - 78541002 gccgggcgcag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444777 11 + 26466322 gccgggcgcag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769146 11 + 43916225 gccgggcgcag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205987 11 + 75399963 gccgggcgcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754610 11 - 7209941 gccgggcgcag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499185 11 + 3907144 gccgggcgcgg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508449 11 - 44557958 gccgggcgcgg i calJac3.chr20 I 19 C 0 s saiBol1.JH378225 6312511 11 + 6628207 gtcgggcacgg i saiBol1.JH378225 I 50 C 0 s otoGar3.GL873566 13679015 11 + 13852661 ataatgcatgg i otoGar3.GL873566 C 0 I 87 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22450660 944 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9259430 8 - 10531588 I e cebCap1.NW_016107433v1 3297697 8 - 5917169 I a score=1686934.000000 s hg38.chr16_GL383557v1_alt 28030 223 + 89672 tggctcacgcctgtaatccca------ggactttgggaggccaaggtgggcagatcacaaggtcaggagttcgagaccagcctgaccaatatggtgaaa-ctccatctctactaaaaatac-aaaaattagccgggcatggtagcgcgtgtctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagatc s panTro5.chr16 21454088 223 - 81586097 tggctcacgcctgtaatccca------ggactttgggaggccaaggtgggcagatcacaaggtcaggagttcgagaccagcctgaccaatattgtgaaa-ctccatctctactaaaaatac-aaaaattagccgggcgtggtagcgcgtgtctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagatc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21520856 223 - 90481686 tggctcacgcctgtaatccca------ggactttgggaggccaaggtgggcagatcacaaggtcaggagtttgagaccagcctgaccaatattgtgaaa-ctccatctctactaaaaatac-aaaaattagccgggcgtggtagcgcgtgtctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccaagatc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 753803 223 + 3010529 tggctcacacctgtaatccca------ggactttgggaggccaaggtgggcagatcacaaggtcaggagttcgagaccagcctgaccaatatggtgaaa-cttcatctctactaaaaatac-aaaaattagccgggcgtggtagcgcgtgtctgtaatcccagctactccggaggctgaggcagaagaatcgcttgaacccaggaggcagaggttgcactgagccgagatc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53867961 223 + 163208435 tggctcacgcctgtaatccca------ggactttgggaggccgaggtgggcagatcacaaggtcaggagttcgagaccagcctgaccaatatggtgaaa-ctccatctctactaaaaatac-aaaaattagccaggcatgatagcgcgtgcctgtgatcccaactactcaggaggctgaggcaggagaattgcttgaacccagaaggcagaggttgcagtgagccgagatc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339492 223 - 74971481 tggctcacgcctgtaatccca------ggactttgggaggcccaggcgggcagttcacaaggtcaggagttcgagaccagcctgaccaatatggtaaga-ccccatctctactaaaaatac-aaaaattagccaggcatggtagcatgtgcctgtaatctcaactactcatgaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagatc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21048831 223 - 78541002 tggctcacgcctgtaatccca------ggactttgggaggcccaggcgggcagttcacaaggtcaggagttcgagaccagcctgaccaatatggtaaga-ccccatctctactaaaaatac-aaaaattagccaggcatggtagcatgtgcctgtaatctcaactactcatgaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagatc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14444788 223 + 26466322 tggctcacgcctgtaatccca------ggactttgggaggcccaggcgggcagttcacaaggtcaggagttcgagaccagcctgaccaatatggtaaga-ccccatctctactaaaaatac-aaaaattagccaggcatggtagcatgtgcctgtaatctcaactactcatgaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagatc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769157 223 + 43916225 tggctcacgcctgtaatccca------ggactttgggaggcccaggcgggcagatcacaaggtcaggagttcgagaccagcctgaccaatatggtaaga-ccccatctctactaaaaatac-aaaaattagacaggcatggtagtatgtgcctgtaatctcaactactcatgaaggtgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagatc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58205998 223 + 75399963 tggctcacgcttgtaatccca------ggactttgggaggcccaggcgggcagatcacaaggtcagaagttcgagaccagcctgaccagtatggtaaga-ccccatctctactaaaaatac-aaaaattagccaggcgtggtagcatgtgcctgtaatctcaactactcatgaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754621 223 - 7209941 tggctcacgcctgtaatccca------ggactttgggaggcccaggcaggcagatcacaaggtcaggagttcgagaccagcctgaccaatatggtaaga-ccccatctctactaaaaatac-aaaaattagccaggcatggtagtatgtgcctgtaatctcaactactcatgaaggtgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagatc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499196 224 + 3907144 tggctcatgcctgtaatccca------ggattttgggaggcccaggcgggcagatcacaaggtcaggagttcgagaccagcctgaccaatatggtaagacccccatctctactaaaaatac-aaaaattagccaggcgtggtagcatgtgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagagattgcagtgagccgagatc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508460 224 - 44557958 tggctcaagcctgtaatccca------gcactttgggaggccgaggcgggtggatcacgaggtcaagagatcgagaccatccaggtcaacatggtgaaa-ccccgtctctactaaagatacaaaaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6312522 230 + 6628207 tggctcaagcctgtaatcccagcacttgcactttgggaggccgaggcaggcggatcacaaggtcaagaaatcgagaccatcctggtcaacatggtgaaa-ctctgtctctaccaaaaatacaaaaaattagctgggcatggtggtgcgtccctgtaatcccagctcctcaggaggctgaggcaggagaattgcctgaacccaggaggcggaggttgcggtgagccgagatc i saiBol1.JH378225 C 0 I 865 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22450660 944 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9259430 8 - 10531588 I e cebCap1.NW_016107433v1 3297697 8 - 5917169 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=365778.000000 s hg38.chr16_GL383557v1_alt 28253 90 + 89672 acaccactacactccagcctgggtgac-agggccaaaccccatct-c-----aaaaaaaaaaaa---aaaag--------aaaaagaaaagaaaaacaaagttgtgat s panTro5.chr16 21454311 101 - 81586097 acaccactacactccagcctgggtgac-agagccaaaccccatct-c-----aaaaaaaaaaaaaagaaaagaaaaagaaaaaaagaaaagaaaaacaaagttgtgat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521079 97 - 90481686 acaccactacactccagcctgggtgac-agagccaaaccccatctac-----aaaaaaaaaaaa---aaaagaaaaaga-aaaaagaaaag-aaaacaaagttgtgat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754026 94 + 3010529 acgccactacactctagcctgggcgac-agagccaaaccccatct-c-----aaaaaaaaaaaa---aaaagaaaaagaaaaaaagaaaagaa----aaagttgtgat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868184 79 + 163208435 acgccactgcactccagcctgggcgac-agagccagaccccatct-c-----aaaaaaaaaaaa------------------caagaaaagaa----aaagttgtgat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339715 72 - 74971481 atgccaccgcactccagcctgggtgac-agagccagactccatct-c-----aaaaaaaaaaaa---aaaa--------------------------aaagttgtgat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049054 72 - 78541002 atgccaccgcactccagcctgggtgac-agagccagactccatct-c-----aaaaaaaaaaaa---aaaa--------------------------aaagttgtgat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445011 77 + 26466322 atgccaccgcactccagcctgggtgac-agagccagactccatct-caaaaaaaaaaaaaaaaa---aaaa--------------------------aaagttgtgat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769380 72 + 43916225 atgccaccgcactccagcctgggtgac-agagccagactccatct-c-----aaaaaaaaaaaa---aaaa--------------------------aaagttgtgat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206221 70 + 75399963 atgccaccgcactccagcctgggtgac-agagccagactccatct-c-------aaaaaaaaaa---aaaa--------------------------aaagttgtggt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754844 72 - 7209941 atgccaccgcactccagtctgggtgac-agagccagactccatct-c-----aaaaaaaaaaaa---aaaa--------------------------aaagttgtgat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499420 69 + 3907144 atgccaccggactccagcctgggtgac-agagccagactccatct-c--------aaaaaaaaa---aaaa--------------------------aaagttgtgat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508684 71 - 44557958 gcaccattgcactccagcctgggaaacaagagcaaaaccccgcct-c-----aaaaaaaaaaaa---aaaa--------------------------aaaaaaaca-- i calJac3.chr20 C 0 C 0 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22450660 944 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9259430 8 - 10531588 I e cebCap1.NW_016107433v1 3297697 8 - 5917169 I e saiBol1.JH378225 6312752 865 + 6628207 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=349381.000000 s hg38.chr16_GL383557v1_alt 28343 47 + 89672 cataaagagcttagcagagtaagctctccataagtgtcattattatc s panTro5.chr16 21454412 47 - 81586097 aataaagagcttagcagagtaagctctccataagtgTCATTATTATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521176 47 - 90481686 aataaagagcttagcagagtaagctctccataagtgTCATTATTATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754120 47 + 3010529 aataaagagcttagcagagtaagctctccataagtgTCATTATTATC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868263 42 + 163208435 aataaagagcttagcagagtAAGTTCTCT----GTGTCATTATTAT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339787 47 - 74971481 aataaagagcttagcagagtaagctctcagtaagtgTCATTATTATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049126 47 - 78541002 aataaagagcttagcagagtaagctctcagtaagtgTCATTATTATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445088 47 + 26466322 aataaagagcttagcagagtaagctctcagtaagtgtcattaTTATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769452 47 + 43916225 aataaagagcttagcagagtaagctctcagtaagtgTCATTATTATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206291 44 + 75399963 aataaagagcttagcagagtaagctctcagtaagtgTC---ATTATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754916 47 - 7209941 aataaagagcttagcagagtaagctctcagtaagtgTCATTATTATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499489 47 + 3907144 aataaagagtttagcagagtaagctctcagtaagggttATTATTATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508755 44 - 44557958 cataaagagcttagcagagtac---cttaataaatgtcattattatt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3297705 46 - 5917169 cataaagagcttagcagagtac-ctcttaataaatgttattattatt i cebCap1.NW_016107433v1 I 8 C 0 s aotNan1.NW_018500622v1 9259438 46 - 10531588 cataaagagtttagcagagtac-ctCTTAACAAATGTCATTATTATT i aotNan1.NW_018500622v1 I 8 C 0 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22450660 944 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=708589.000000 s hg38.chr16_GL383557v1_alt 28390 93 + 89672 tattTTGATTCCTTTTGTTTTTAAAAATGTACAACTTAGCCAC------ttttgttttttctctttttgagacagggtcttgctccattgcccaagctg s panTro5.chr16 21454459 93 - 81586097 TATTTTGATTCCTTTTGTTTTTAAAAATGTACAACTTAGCCAC------ttttgttttttctctttttgagacagggtcttgctccattgcccaagctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521223 93 - 90481686 TATTTCGATTCCTTTTGTTTTTAAAAATGTACAACTTAGCCAC------ttttgttttttctctttttgagacagggtcttgctccattgcccaagctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754167 93 + 3010529 TATTTCGATTCCTTTTGTTTTTAAAAATGTACAACTTAGCCAC------ttttgttttttctctttttgagacagggtcttgctccattgcccaggctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868305 90 + 163208435 --TTTGATTTCCTTTTGTTTTTAAAAATTTACAACTTAGCTAC------tttt-ttttttctctttttgagacagggtcttgctccattgcccaggctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339834 87 - 74971481 AATTTCGATTCCTTTTGTTTTTAAAAATTTACAATTTAGCTAC------------tttttctttttttgagacagggtcttgctccattgccccggctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049173 87 - 78541002 AATTTCGATTCCTTTTGTTTTTAAAAATTTACAATTTAGCTAC------------tttttctttttttgagacagggtcttgctccattgccccggctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445135 87 + 26466322 AATTTCGATTCCTTTTGTTTTTAAAAATTTACAATTTAGCTAC------------tttttctttttttgagaaagggtcttgctccattgccccggctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769499 87 + 43916225 AATTTCGATTCCTTCTGTTTTTAAAAATTTACAATTTAGCTAC------------tttttctttttttgagacagggtcttgctccattgccccggctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206335 91 + 75399963 AATTTCGATTCCTTTTGTTTTAAAAAATTTACAATTTAGCTAC-------ttt-ttttttctttttttgagatagggtcttgctccattgccccggctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6754963 87 - 7209941 AATTTCGATTCCTTTTGTTTTTAAAAATTTACAATTTAGCTAC------------tttttctttttttgagacagggtcttgctccattgccccggctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499536 92 + 3907144 AATTTCAATTCCTTTTGTTTTTAAAAATTTACAATTTAGCTAC------tttt-ttctttctttttttgagacagggtcttgctccattgcccaggctg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508799 97 - 44557958 TATTTCTATGCCTTTCATTTTAAAAAATTTACAACTTAGCTACAAtttttttttttttttttttttttgagaca-ggtctggct-cattgcccaggctg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3297751 95 - 5917169 TATTTCTATTCCTTTCATTTTTAAAAATTTACAGCTTAGCTACAA----tttttttttttttttttttgaaacagggtcttgctccatttcccaggctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259484 92 - 10531588 TATTTCTATTCCTTTCATTTTTAAAAATTTACAACTTAGCTATAA-------ttttttttttttttttgagacagggtcttgctccattgcccaggctg i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22451604 73 - 129401213 TGTTTTAATTCTTTTTTTTTTT--------------------T------CTTCTTTttttggtttttcgagacagggtttttctatatagccctggctg i mm10.chr8 I 944 I 37 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=459772.000000 s hg38.chr16_GL383557v1_alt 28483 50 + 89672 gagtatagtggctcaaacatggctcactgcagcctcaatctcccgagctc s panTro5.chr16 21454552 50 - 81586097 gagtatagtggctcaaacatggctcactgcagcctcaatctcccgagctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521316 50 - 90481686 gagtatagtggctcaaacatggctcactgcagcctcaatctcccgagctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754260 50 + 3010529 gagtatagtggctcaaacatggctcactgcagcctcaatctcccgagctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868395 50 + 163208435 gagtatagtggctcaaacacggctcactacagcctcaatctcccgagctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339921 50 - 74971481 gagtatagtggctcaaacacggctcactgaagcctcaatctcccgagctc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049260 50 - 78541002 gagtatagtggctcaaacacggctcactgaagcctcaatctcccgagctc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445222 50 + 26466322 gagtatagtggctcaaacacggctcactgaagcctcaatctcccgagctc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769586 50 + 43916225 gagtatagtggctcaaacacggctcactgaagcctcaatctcccaagctc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206426 50 + 75399963 gagtacagtggctcaaacacggctcactgaagcctcaatctcccgagctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755050 50 - 7209941 gagtatagtggctcaaacacggctcactgaagcctcaatctcccaagctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499628 50 + 3907144 gagtatagtggctcaaacacggctcactgaagcctcagtctcccgagctc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508896 50 - 44557958 gagtatagtggctcaaacacagctcactgcagcctcaatctcccaagctc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3297846 50 - 5917169 gagtatagtagctcaaacacagctcactgcagcttcaatctccgaagctc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259576 50 - 10531588 gagtatagtggcacaaacacagctcactgcagcctcaatctcccaagctc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22451677 37 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=710802.000000 s hg38.chr16_GL383557v1_alt 28533 78 + 89672 aagtgatcctcccacctcagcctcccaagtagctgggaccacaggcactcgccacctcacctggc----------taa---ttttttacat s panTro5.chr16 21454602 78 - 81586097 aagtgatcctcccacctcagcctcccaagtagctgggaccacaggcactcgccacctcacctggc----------taa---ttttttacat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521366 78 - 90481686 aagtgatcctcccacctcagcctcccaagtagctgggaccacaggcactcgccacctcacctggc----------taa---ttttttacat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754310 78 + 3010529 aagtgatcctcccacctcagcctcccaaggagctgggaccacaggcactcgccacctcacctggc----------taa---ttttttacat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868445 78 + 163208435 aagtgatcctcccacctcagcctcccaagtagctgggaccacaggcactcgccccaacacctggc----------taa---ttttttacat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21339971 78 - 74971481 aagtgatcctcccacctcagcctcccaagtaggtgggaccacaggcgcttgccaccacacctggc----------taa---ttttttacat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049310 78 - 78541002 aagtgatcctcccacctcagcctcccaagtaggtgggaccacaggcgcttgccaccacacctggc----------taa---ttttttacat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445272 78 + 26466322 aagtgatcctcccacctcagcctcccaagtaggtgggaccacaggcgcttgccaccacacctggc----------taa---ttttttacat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769636 78 + 43916225 aagtgatcctcccacctcagcctcccaagtaggtgggaccacaggcgcttgccaccacacctggc----------taa---ttttttacat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206476 78 + 75399963 aagtgatcctcccatctcagcctcccaagtaggtaggaccacaggcgcttgccaccacacctggc----------taa---ttttttacat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755100 78 - 7209941 aagtgatcctcccacctcagcctcccaagtaggtgggaccacaggcgcttgccaccacacctggc----------taa---ttttttacat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499678 78 + 3907144 aagtgatcttcccacctcagcctcccaagtaggtggtaccacaggcgctcgccaccacacctggc----------taa---ttttttacat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21508946 74 - 44557958 aagtgatccttccacttcagcctccctagtagctgg-accacaggtgctcgccaccacacctggc----------------ttttttacat i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3297896 80 - 5917169 aactgatccttccacttcagcctccctagtagctgg-accacaggtgctcgccaccacacctggc----------taatttttttttacat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259626 77 - 10531588 aagtgatccttccacttcagcctctctagtagctgg-accacaggtgctcaccaccacacctggc----------taa---ttttttacat i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22451714 87 - 129401213 gagaaatccacctgcctctacctcccgagt-gctgggattaaaggcgtgtgccaccacgcctggctCCCATGTTTTAA---TTTTTAAAAT i mm10.chr8 I 37 I 146 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=1044654.000000 s hg38.chr16_GL383557v1_alt 28611 121 + 89672 gttttgtagagacagggtctcgccatgttgtgcaggctggtcttgaactactaggctgaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc s panTro5.chr16 21454680 121 - 81586097 gttttgtagagacagggtctcgccatgttgtgcaggctggtcttgaactactaggctgaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521444 121 - 90481686 gttttgtagagacagggtctcgccatgttgtgcaggctggtcttgaactactaggctgaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754388 121 + 3010529 gttttgtaaagacagggtctcgccatgttgtgcaggctggtcttgaactactgggctgaagtgattccacctggacctcccaaagtgctgggattacaggtatgagccaacat-gcccggcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868523 121 + 163208435 gttttgtagagacagggtctcgccatgttgcacaggctggtcttgaactactgggctcaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340049 121 - 74971481 gttttgtagagacagggtcttgccatgttgtgcaggctggtcttgaacgactgggctcaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049388 121 - 78541002 gttttgtagagacagggtcttgccatgttgtgcaggctggtcttgaacgactgggctcaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445350 121 + 26466322 gttttgtagaaacagggtctcgccatgttgtgcaggctggtcttgaacgactgggctcaagtgattccacttggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769714 121 + 43916225 gttttgtagagacagggtctcgccatgttgtgcaggctagtcttgaacgactgggttcaagtgatttcacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206554 121 + 75399963 gttttgtagagacagggtctcgccatgttgtgcaggctggtcttgaacgactgggctcaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755178 118 - 7209941 attttgtagagacagggtctcgccatgttgtgcaggctagtcttga---actgggttcaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499756 121 + 3907144 gttttggagagacagggtctcgccatgttgtgcaggctggtcttgaacgactgggctcaagtgattccacctggacctcccaaagtgctgggattacaggtgtgagccaacat-gcccggcc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509020 122 - 44557958 gttttgtaaagccagggtcttgccatgttacacaagctgttacagaattattgggctcaagtgatatcacggggacctcccaaagtgctggaattacagatgtgagccaacatggcctggcc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3297976 122 - 5917169 gttttgtagagccagggtcttgccatgttacataagctgttaatgaattattgggctcaagtgatatcacctggacctcccaaagtgctggaattacaggtgtgagccaacacggcctggcc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259703 122 - 10531588 gttttgtagggccagggtcttgccatgttacacaagctgttactgaattattgggctcaagtgatatcacctggacctcccaaagtgctggaattacaggtgtgagccaacatggcctggcc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22451801 146 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I e otoGar3.GL873566 13679026 87 + 13852661 I a score=88367.000000 s hg38.chr16_GL383557v1_alt 28732 10 + 89672 AAAATTATTT s panTro5.chr16 21454801 10 - 81586097 AAAATTATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521565 10 - 90481686 AAAATTATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754509 10 + 3010529 AAAATTATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868644 10 + 163208435 AAAATTATTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340170 10 - 74971481 AAAAATATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049509 10 - 78541002 AAAAATATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445471 10 + 26466322 AAAAATATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769835 10 + 43916225 AAAAATATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206675 10 + 75399963 AAAAATATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755296 10 - 7209941 AAAAATATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499877 10 + 3907144 AAAAATATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509142 10 - 44557958 AAAAATATTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3298098 10 - 5917169 AAAAATATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259825 10 - 10531588 AAAAATATTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679113 10 + 13852661 AAAAAGATTA i otoGar3.GL873566 I 87 C 0 e canFam3.chr5 80446930 230 + 88915250 I e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22451801 146 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I a score=81918.000000 s hg38.chr16_GL383557v1_alt 28742 7 + 89672 TAAGCCC s panTro5.chr16 21454811 7 - 81586097 TAAGCCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521575 7 - 90481686 TAAGCCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754519 7 + 3010529 TAAGCCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868654 7 + 163208435 TAAGCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340180 7 - 74971481 TAAGCTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049519 7 - 78541002 TAAGCTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445481 7 + 26466322 TAAGCTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769845 7 + 43916225 TAAGCTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206685 7 + 75399963 TAAGCTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755306 7 - 7209941 TAAGCTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499887 7 + 3907144 TAAGCTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509152 7 - 44557958 TAAGCTC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3298108 7 - 5917169 TAAGCTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259835 7 - 10531588 TAAGCTC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679123 7 + 13852661 TAAGCTC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80447160 7 + 88915250 TAAACTC i canFam3.chr5 I 230 C 0 e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22451801 146 - 129401213 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I a score=76844.000000 s hg38.chr16_GL383557v1_alt 28749 7 + 89672 TATAGCC s panTro5.chr16 21454818 7 - 81586097 TATAGCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521582 7 - 90481686 TATAGCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754526 7 + 3010529 TATAGCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868661 7 + 163208435 TATAGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340187 7 - 74971481 TACAGCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049526 7 - 78541002 TACAGCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445488 7 + 26466322 TACAGCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769852 7 + 43916225 TACAGCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206692 7 + 75399963 TACAGCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755313 7 - 7209941 TACAGCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499894 7 + 3907144 TACAGCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509159 7 - 44557958 TATAGCC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3298115 7 - 5917169 TATAGCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259842 7 - 10531588 TATAGCC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679130 7 + 13852661 TATAACC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22451947 5 - 129401213 TATAG-- i mm10.chr8 I 146 C 0 s canFam3.chr5 80447167 7 + 88915250 TATAGCT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54914644 900 + 72247402 I e proCoq1.NW_012152729v1 2925181 123 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I a score=1779756.000000 s hg38.chr16_GL383557v1_alt 28756 157 + 89672 -------------TGTTATAGTGTAC----ATAAGTTAACCTAGCAACCAccccactccagattt--tatagtctggtgaggctgccaacctcaataca--caagggatgggcacg----tgacacaggtctagattgcagtctccatcattttggtaatagtgata-ggtccg-aggaactgg- s panTro5.chr16 21454825 159 - 81586097 -------------TGTTATAGTGTAC----ATAAGTTAACCTAGCAACCAccccactccagattttatatagtctggtgaggctgccaacctcaataca--caagggatgggcacg----tgacacaggtctagattgcagtctccatcattttggtaatagtgata-ggtccg-aggaactgg- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521589 157 - 90481686 -------------TGTTATAGTGTAC----ATAAGTTAACCTAGCAACCAccccactccagattt--tatagtctggtgaggctgccaacctcaataca--caagggatgggcacg----tgacacaggtctagattgcagtctccatcattttggtaatagtgata-ggtcca-aggaACTGG- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754533 157 + 3010529 -------------TGTTATAGTGTAC----ATAGGTTAACCTAGCAACCAccccactccagattt--tatagtctggtgaggctgccaacctcaagaca--caagggatgggcacg----tgacacaggtctagattgcagtctccatcattttggtaacagtgata-ggtccg-aggaactgg- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868668 157 + 163208435 -------------TGTTATAGTGAAC----ATAAGTTAACCTAGCaaccaccccactccagattt--catagtctggtgaggctgccaacctcaataca--caagggatgggcacg----tgacacaggtctagattgcagtctccatcattctggtaatagtgata-ggtccG-ATGAACTGG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340194 157 - 74971481 -------------TGTTATAGTGAAC----ATAAGTTAACCTAGCaaccaccccactccagattt--catagtcttgtgaggctgccaacctcaataca--caagggatgagcacg----tgacagaggtctagactgcagtctccatcattttggtaatagtgata-ggtcca-aggaACTGG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049533 157 - 78541002 -------------TGTTATAGTGAAC----ATAAGTTAACCTAGCAACCACCCCACTCCAGATTT--CATAGTCTTGTGAGGCTGCCAACCTCAATACA--CAAGGGATGAGCACG----TGACAGAGGTCTAGACTGCAGTCTCCATCATTTTGGTAATAGTGATA-GGTCCA-AGGAACTGG- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445495 157 + 26466322 -------------TGTTATAGTGAAC----ATAAGTTAACCTAGCaaccaccccactccagattt--catagtcttgtgaggctgccaacctcaataca--caagggatgagcacg----tgacagaggtctagactgcagtctccatcattttggtaatagtgata-ggtcca-aggaACTGG- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20769859 157 + 43916225 -------------TGTTATAGTGAAC----ATAAGTTAACCTAGCaaccaccccactccagattt--catagtctggtgaggctgccaacctcaataca--caagggatgagcacg----tgacagaggactagactgcagtctccatcattttggtaatagtgata-ggtcca-aggaACTGG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206699 157 + 75399963 -------------TCTTATAGTGAAC----ATAAGTTAACCTAGCAACCAACCCACTCCAGATTT--CATAGTCTGGTGAGGCTGCCAACCTCAATACA--CAAGGGATGAGCACG----TGACAGAGGTCTAGACTGCAGTCTCCATCATTTTGGTAATAGTGATA-CGTCCA-AGGAACTGG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755320 161 - 7209941 -------------TGTTATAGTGAACATAAATAAATTAACCTAGCaaccaccccactccagattt--catagtctggtgaggctgccaacctcaataca--caagggatgagcacg----tgacagaggactagactgcagtctccatcattttggtaatagtgata-ggtcca-aggaACTGG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 499901 157 + 3907144 -------------TGTTATAGTGAAC----ATAAGTTAACCTAGCAACCACCCCACTCCAGATTT--CATAGTCTGGTGAGGCTGCCAACCTCAATACA--CAAGGGATGGGCACG----TGACAGAGGTCTAGATTGCAGTCTCCATCATTTTGGTAATAGTGATA-GGTCCA-AGGAACTGG- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509166 153 - 44557958 -------------TGTTATAGTGAAC----ATAAGTTAGCCTAGCAACCGccccactccagatta--ta-tgtctggtaaggctaccaacctcaatata--ccagggatgggcaca----tgacacaggtctagatt---gtctccatcattttgataatattgata-agtcca-aggaACTGG- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3298122 156 - 5917169 -------------TGTTATAGTGAAC----ATAAGTTAGCCTAGCAActgccccactccagatta--tg-agtgtgataaggctaccaacctcaataca--ccagggatgggcacg----tgacacaggtctagattgcagtctccatcattttggtaatagtgata-agtcta-aggaACTGG- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9259849 156 - 10531588 -------------TGTTATAGTGAAC----GTAAGTTAGCCTAGCAActgccccactccagatta--tg-agtctggtaaggctaccaacctcaataca--ccagggatgggcacg----tgacacaggtctagattgcagtctccatcattttggtaatagtgata-agtcca-aggaACTGG- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2925304 157 + 9850184 -------------TGTTATAGTGGAC----ATCAGTTAGCCTAGCAAccaccccaatccacattt--catagtttggtgaggctgccaatctcgataca--ccggggatgggcaca----tgacccaggactagctcatggtctccatcatcttggtaatagtgata-ggtcca-aggggtagg- i proCoq1.NW_012152729v1 I 123 C 0 s otoGar3.GL873566 13679137 150 + 13852661 ---------------TGAATGTG--------TAAGTTAGGCTAGCAATCACCCCATTCCACATTT--C--AGTTTGGTGAGGCTGTCAATCTTGGGACAGGCCAGGGAT-GGCACG----AGACTCAGACCTAGATCACACTCTCCATCATCTGTGTAATACGGATA-GTTCCA-AGACGTAGG- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22451952 150 - 129401213 -------------TGTTATAGTGGAT----ATGAATTCATGTAGCAGCCACCGCA-TCAATATTT--C--AGTCTGATGCATTT-TCAATCTCCATAC---CTTGGCAGAAACATG--------ATGGGCCTAGACCACAGTCTCTATCATCTTGGTAACAGTGACATAGTCTGTAAGAAGTGG- i mm10.chr8 C 0 I 1 s canFam3.chr5 80447174 174 + 88915250 TCAATGTCTGCATTGTAACAATGGAG----GCAAGTCTGCCTAGAAACCACCCTGTTCAGCATTT--CACAGTTAGATGAGGTTGCCAATTTTGATATA--ccagggatgggctcgttcatgacccaggcctagatcacagtctctatcatcttggaaatagtgat--ggtttg-aagaggtaga i canFam3.chr5 C 0 C 0 e micMur3.chr20 54914644 900 + 72247402 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6312752 865 + 6628207 I a score=449658.000000 s hg38.chr16_GL383557v1_alt 28913 44 + 89672 caAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAT s panTro5.chr16 21454984 44 - 81586097 caAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521746 44 - 90481686 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754690 44 + 3010529 caAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868825 44 + 163208435 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340351 44 - 74971481 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049690 44 - 78541002 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445652 44 + 26466322 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770016 44 + 43916225 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCTAAACTGATAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206856 44 + 75399963 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755481 44 - 7209941 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500058 44 + 3907144 CAAAGCAGAACT-ATTGGAGTCC-TTCCTATCTCCAAACTGATAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509319 40 - 44557958 CAAAGCAGAACT-ACTGAAG-----TCCTACCTCCAAACTGATAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313617 40 + 6628207 cAAAACAGATCT-GTTGAAG-----TCCTACCTTCAAACTGATAAT i saiBol1.JH378225 I 865 C 0 s cebCap1.NW_016107433v1 3298278 40 - 5917169 CAAAACAGAACT-ATTGAAG-----TTCTACCTCCAAACTGATAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260005 40 - 10531588 CAAAGCAGAACT-ATTGAAG-----TCCTACCTCCAAACTGATAAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2925461 39 + 9850184 caaagcagagataactgaagtcc-ttcctg-----agactGATAT- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13679287 39 + 13852661 CAAAGCAGAGCCAACTGGAATCC-TACCGG-----AGACTGACAA- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452103 41 - 129401213 CAAAGTAGAGCTAATTAGAATCCTTTTCTA-----AAGCTGGTAAG i mm10.chr8 I 1 I 139 s canFam3.chr5 80447348 40 + 88915250 caaagcagagctaatcagagtcc-ttccaag----aaattgttat- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54914644 900 + 72247402 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=503846.000000 s hg38.chr16_GL383557v1_alt 28957 45 + 89672 GTGAGTGGT-AAAAGAA---CCCTCCAGTTT-TTCTTACAGGGGTTAGTT s panTro5.chr16 21455028 45 - 81586097 GTGAGTGGT-AAAAGAA---CCCTCCAGTTT-TTCTTACAGGGGTTAGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521790 45 - 90481686 GTGAGTGGT-AAAAGAA---CCCTCCAGTTT-TTCTTACAGGGGTTAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754734 45 + 3010529 GTGAGTGGT-AAAAGAA---CCCTCCAGTTT-TTCTTACAGGGGTTAGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868869 45 + 163208435 GTGAGTGGT-AAAAGAA---CCCTCCAGTTT-TTCTTACAGGGGTTAGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340395 45 - 74971481 GTGAGTGGT-AAAAGAA---CACTCCAGTTT-TTCCTACAGGGGTTAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049734 45 - 78541002 GTGAGTGGT-AAAAGAA---CACTCCAGTTT-TTCTTACAGGGGTTAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445696 45 + 26466322 GTGAGTGGT-AAAAGAA---CACTCCAGTTT-TTCTTACAGGGGTTAGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770060 45 + 43916225 GTGAGTGGT-AAAAGAA---CACTCCAGTTT-TTCTTACGGGGGTTAGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206900 45 + 75399963 GTGAGTGGT-AAAAGAA---CACTCCAGTTT-TTCTTACAGGGGTTAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755525 45 - 7209941 GTGAGTGGT-AAAAGAA---CACTCCAGTTT-TTCTTACGGGGGTTAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500102 45 + 3907144 GTGAGTGGC-AAAAGAA---TGCTCCAGTTT-TTCTTACAGGGGTTAGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509359 46 - 44557958 GTGAGTAGTAAAAAAAA---CCTTCCAGTTT-TTCTTATAGGGGTTAGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313657 45 + 6628207 GTGAGTAGT-AAAAGAA---CCTTCCAGTTT-TTCTTATAGGGGTTAGTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298318 45 - 5917169 GTGAGTAGT-AAAAGAA---CCTTCCAGTTT-TTCTTATAGGGGTTAGTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260045 45 - 10531588 GTGAGTAGT-AAAAGAA---CCTTCCAGTTT-TTCTTATAGGGGTTAGTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2925500 45 + 9850184 GTGGGTGTT-ACAAGAAAACCCCTTCTGGTT-TTTTCACAGGGGTTA--- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13679326 46 + 13852661 GTGAGTGCT-AGAAGAAAAACCCATTTGTTTGTTTTAATAAGGGTTA--- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80447388 42 + 88915250 atgggtgct-agaagaaaaatgtttc--ttt-ttttaactggagtt---- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54914644 900 + 72247402 I e mm10.chr8 22452144 139 - 129401213 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=13923.000000 s hg38.chr16_GL383557v1_alt 29002 1 + 89672 A s panTro5.chr16 21455073 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521835 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754779 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868914 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340440 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049779 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445741 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770105 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206945 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755570 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500147 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509405 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313702 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298363 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260090 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22452283 1 - 129401213 a i mm10.chr8 I 139 C 0 s canFam3.chr5 80447430 1 + 88915250 a i canFam3.chr5 C 0 C 0 e micMur3.chr20 54914644 900 + 72247402 I e proCoq1.NW_012152729v1 2925545 0 + 9850184 C e dasNov3.JH569970 906365 3461 + 1009443 I e otoGar3.GL873566 13679372 0 + 13852661 C a score=3659885.000000 s hg38.chr16_GL383557v1_alt 29003 216 + 89672 TTAAGTTAAGGCAATATGTTCCTAGAGCTGCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccggtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgggtttctgcaaccaa s panTro5.chr16 21455074 216 - 81586097 TTAAGTTAAGGCAATATGTTCCTAGAGCTGCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaaccgagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgggtttctgcaaccaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21521836 216 - 90481686 TTAAGTTAAGGCAATATGTTCCTAGAGCTGCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaaccgagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgggtttctgcaaccaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754780 214 + 3010529 TTAAGTTAAGGCAATATGTTCCTAGAGCTGCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGCA--AGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgggtttctgcaaccaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53868915 216 + 163208435 TTAAGTTAAGGCAATATATTCCTACAGCTGCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacataaaggcaat-----acatcccacttctgc-taaattagttgggtttgggtttctgCAACCAA i nomLeu3.chr2 C 0 M 100 s rheMac8.chr20 21340441 215 - 74971481 TTAAGTTAAGGCAATATATTCCTAGAGCTCCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttccgcttaaattcattggttttgggtttctgcaaccaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049780 215 - 78541002 TTAAGTTAAGGCAATATATTCCTAGAGCTCCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttccgcttaaattcattggttttgggtttctgcaaccaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445742 215 + 26466322 TTAAGTTAAGGCAATATATTCCTAGAGCTCCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttccgcttaaattcattggttttgggtttctgcaaccaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770106 215 + 43916225 TTAAGTTAAGGCAATATATTCCTAGAGCTCCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttctgcttaaattcattggttttgggtttctgcaaccaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58206946 215 + 75399963 TTAAGTTAAGGCAATATATTCCTAGAGCTCCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttctgcttaaattcattggttttgggtttctgcaaccaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755571 215 - 7209941 TTAAGTTAAGGCAATATATTCCTAGAGCTCCAGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttctgcttaaattcattggttttgggtttctgcaaccaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500148 215 + 3907144 TTAAGTTAAGGCAATATATTCCTAGAGCTGCCGGCACCATCTTAGCTGACTATACAGAATTAGACCCTCCACAGC-GGAGATGTTG----CAGCCAAGACAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-aaggcaac-----acattccacttctgcttaaattcgttggttttgggtttctgcaaccaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509406 216 - 44557958 TTAAGTTAAGGCAATATATTCCTAGAGCTACAGGCACCATGTTAGCTGACTATACAGAATTAGGCCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttcggcctttggatcccactgtacctaaacctagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgagtttctggaaccaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313703 216 + 6628207 TTAAGTTAAGGCAATATATTCCTAGAGCTACAGGCACCATGTTAGCTGACTATACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGattatttcagcctttggatcccactgcacctaaacctagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctacttaaattagttggttttgggtttctggaaccaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298364 216 - 5917169 TTAAGTTAAGGCAATATATTCCTAGAGCTACAGGCACCATGTTAGCTGACTATACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttcagcctttggatcccactgcacctaaacctagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgggtttctggaaccaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260091 216 - 10531588 TTAAGTTAAGGCAATATATTCCTAGAACTACAGGCACCATGTTAGCTGACTATACAGAATTAGACCCTCTACAGCAGGAGATGTTG----CAGCCAAGATAAtttcagcctttggatcccactgcacctaaacctagatccacccccagtctcaggagttacat-aaggcaat-----acattccacttctgcttaaattagttggttttgggtttctggaaccaa i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54915544 216 + 72247402 TTAAGTTGGGGCAATACATTCCTTGAATTGCCGGCACCATCTTAGCTGACTACACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttgagcctttggatcccactgaacctaaacctagatccacccccagtctcaggagttacat-gaggcaat-----acattccacttctgcttaaattagtttgtttttggtttctgcaaccaa i micMur3.chr20 I 900 C 0 s proCoq1.NW_012152729v1 2925545 213 + 9850184 ---AGTTAGGGCAATATATTCCTTGAATTGCCGGCACCATCTTAGCTGACTACACAGAATTAGACCCTCCACAGCAGGAGATGTTG----CAACCAAGATAAtttaagcctttggatcccactgaacctaaacgtagatccacccccagtctcaggagttacat-gaggcaat-----acattccacttctgcttaaattagtttgttttgggtttctgcaaccaa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13679372 213 + 13852661 ---AATTGGGGCAATATATTCCTTGAATTGTGAGCACAATCTTAGCTGACTACACAGAATTAGACCCTCAACAGCAGGAGACGTTG----CAGCCAAGATAAtttgagcctttggagcccactgagcctaaacctagatccacccccagtcccagaagttacat-gaggcaat-----acattccacttctgcttaaattagtttgttttggatttctgcaaccaa i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452284 224 - 129401213 aaaaGTTAGGACTATATATTCCTAAAACTGTTTGTGCCATCTTAGCTGACTATACAAAATTAGACTCTCCACAACAGGAACTGCTGTGGCCAGCCAAGATAATTTGAGCTTTTGGATTCTACTGAACCTAAACCTAGAGCCACCTCCACTCTTAGGAGTTACCT-GAGGTAACCAACAGCACAACACTTCAGCTTAAATTAGTGTGTGTAAGCTTTCTGCAGTCA- i mm10.chr8 C 0 C 0 s canFam3.chr5 80447431 211 + 88915250 ttaagttatggcaatatattcctagaactgccaatgccattttAGCTGACTATACAGAATTAGACTCTCCACAGCAGGAGATGTTG----CAGCCAAGATAAtttgagcctttggatctctctggacccaaacctagatccacccccagtcttaagaactatat-gaggcgat-----acattccacttctgctta-----gtttggtttgggtttctgcaaccaa i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 906365 3461 + 1009443 I a score=82384.000000 s hg38.chr16_GL383557v1_alt 29219 5 + 89672 aataa s panTro5.chr16 21455290 5 - 81586097 aataa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522052 5 - 90481686 aataa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 754994 5 + 3010529 aataa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21340656 5 - 74971481 aataa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21049995 5 - 78541002 aataa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445957 5 + 26466322 aataa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770321 5 + 43916225 aataa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207161 5 + 75399963 aataa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755786 5 - 7209941 aataa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500363 5 + 3907144 aataa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509622 5 - 44557958 aataa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313919 5 + 6628207 aatat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298580 5 - 5917169 aataa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260307 5 - 10531588 aataa i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54915760 5 + 72247402 aaTAA i micMur3.chr20 C 0 I 137 s proCoq1.NW_012152729v1 2925758 5 + 9850184 aataa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13679585 5 + 13852661 aataa i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452508 5 - 129401213 AATAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80447642 5 + 88915250 aataa i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 906365 3461 + 1009443 I e nomLeu3.chr2 53869131 100 + 163208435 M a score=116982.000000 s hg38.chr16_GL383557v1_alt 29224 8 + 89672 ttcttact s panTro5.chr16 21455295 8 - 81586097 ttcttact i panTro5.chr16 C 0 I 8 s panPan2.chr16 21522057 8 - 90481686 ttcttact i panPan2.chr16 C 0 I 1 s gorGor5.CYUI01000018v1 754999 8 + 3010529 ttcttact i gorGor5.CYUI01000018v1 C 0 I 2 s rheMac8.chr20 21340661 8 - 74971481 ttcttact i rheMac8.chr20 C 0 I 7 s macFas5.chr20 21050000 8 - 78541002 ttcttact i macFas5.chr20 C 0 I 7 s macNem1.NW_012011355v1 14445962 8 + 26466322 ttctTAct i macNem1.NW_012011355v1 C 0 I 2 s cerAty1.NW_011999143v1 20770326 8 + 43916225 ttctaact i cerAty1.NW_011999143v1 C 0 I 3 s chlSab2.chr5 58207166 8 + 75399963 ttcttact i chlSab2.chr5 C 0 I 5 s manLeu1.NW_012101698v1 6755791 8 - 7209941 ttcttact i manLeu1.NW_012101698v1 C 0 I 7 s colAng1.NW_012123265v1 500368 8 + 3907144 ttcttact i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509627 8 - 44557958 ttcttact i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313924 8 + 6628207 ttcttact i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298585 8 - 5917169 ttcttact i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260312 8 - 10531588 ttcttact i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2925763 8 + 9850184 ttcttact i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13679590 7 + 13852661 -ttttact i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452513 8 - 129401213 TTCTTGCT i mm10.chr8 C 0 I 168 s canFam3.chr5 80447647 8 + 88915250 ttcttact i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915765 137 + 72247402 I e dasNov3.JH569970 906365 3461 + 1009443 I e nomLeu3.chr2 53869131 100 + 163208435 M a score=23270.000000 s hg38.chr16_GL383557v1_alt 29232 3 + 89672 aaA s panTro5.chr16 21455311 3 - 81586097 aaa i panTro5.chr16 I 8 C 0 s panPan2.chr16 21522066 3 - 90481686 aAA i panPan2.chr16 I 1 C 0 s gorGor5.CYUI01000018v1 755009 3 + 3010529 AAA i gorGor5.CYUI01000018v1 I 2 C 0 s rheMac8.chr20 21340676 3 - 74971481 aaa i rheMac8.chr20 I 7 C 0 s macFas5.chr20 21050015 3 - 78541002 aaa i macFas5.chr20 I 7 C 0 s macNem1.NW_012011355v1 14445972 3 + 26466322 aaa i macNem1.NW_012011355v1 I 2 C 0 s cerAty1.NW_011999143v1 20770337 3 + 43916225 AAA i cerAty1.NW_011999143v1 I 3 C 0 s chlSab2.chr5 58207179 3 + 75399963 aaa i chlSab2.chr5 I 5 C 0 s manLeu1.NW_012101698v1 6755806 3 - 7209941 aaa i manLeu1.NW_012101698v1 I 7 C 0 s colAng1.NW_012123265v1 500376 2 + 3907144 -aa i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2925771 3 + 9850184 aaA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13679597 3 + 13852661 aaA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80447655 3 + 88915250 aaA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915765 137 + 72247402 I e mm10.chr8 22452521 168 - 129401213 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9260320 0 - 10531588 C e cebCap1.NW_016107433v1 3298593 0 - 5917169 C e saiBol1.JH378225 6313932 0 + 6628207 C e calJac3.chr20 21509635 0 - 44557958 C e nomLeu3.chr2 53869131 100 + 163208435 M a score=28665.000000 s hg38.chr16_GL383557v1_alt 29235 3 + 89672 AAA s panTro5.chr16 21455314 3 - 81586097 aaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522069 3 - 90481686 AAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755012 3 + 3010529 AAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869231 3 + 163208435 Aaa i nomLeu3.chr2 M 100 C 0 s rheMac8.chr20 21340679 3 - 74971481 aaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050018 3 - 78541002 aaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445975 3 + 26466322 aaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770340 3 + 43916225 AAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207182 3 + 75399963 aaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755809 3 - 7209941 aaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500378 3 + 3907144 aaa i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2925774 3 + 9850184 AAA i proCoq1.NW_012152729v1 C 0 I 138 s otoGar3.GL873566 13679600 3 + 13852661 AAA i otoGar3.GL873566 C 0 I 102 s canFam3.chr5 80447658 3 + 88915250 AAA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915765 137 + 72247402 I e mm10.chr8 22452521 168 - 129401213 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9260320 0 - 10531588 C e cebCap1.NW_016107433v1 3298593 0 - 5917169 C e saiBol1.JH378225 6313932 0 + 6628207 C e calJac3.chr20 21509635 0 - 44557958 C a score=492853.000000 s hg38.chr16_GL383557v1_alt 29238 55 + 89672 AAAAAAAAATGCA----------AACCAGGAA-------------CAGTAATTAGTTCATgcctgtaatcccaactac s panTro5.chr16 21455317 55 - 81586097 aaaaaaaaaaGCA----------AACCAGGAA-------------CAGTAATTAGTTCATgcctgtaatcccaactac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522072 55 - 90481686 AAAAAAAAAAGCA----------AACCAGGAA-------------CAGTAATTAGTTCATgcctgtaatcccaactac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755015 55 + 3010529 AAAAAAAAATGCA----------AACCAGGAA-------------CAGTAATTAGTTcacgcctgtaatcccaactac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869234 51 + 163208435 aaaaaaaaatgca----------agccaggaa-------------cag----tagttcacacctgtaatcccaactac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340682 51 - 74971481 aaaaaaaaTTGCA----------Agccaggaa-------------cag----tagttcatgcctgtaatcccaactac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050021 51 - 78541002 aaaaaaaattgca----------agccaggaa-------------cag----tagttcatgcctgtaatcccaactac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14445978 51 + 26466322 aaaaaaaattgca----------agccaggaa-------------cag----tagttcatgcctgtaatcccaactac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770343 51 + 43916225 AAAAAAAATTGCA----------Agccaggaa-------------cag----tagttcatgcctgtaatcccaactac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207185 51 + 75399963 aaaaaaaaTTGCA----------Agccaggaa-------------cag----tagttcatgcctgtaatcccaactat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755812 51 - 7209941 aaaaaaaattgca----------agccaggaa-------------cag----tagttcatgcctgtaatcccaactac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500381 51 + 3907144 aaaaaaaattgca----------agccacgaa-------------cag----tagttcatgcctgtaatcccaactac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509635 51 - 44557958 aaAaaaaactgca----------agccaggaa-------------cag----tagttcacactcataatcacaactac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313932 51 + 6628207 aaAAAAAATTGCA----------Ggccaggaa-------------cag----tagttcacacctgtaatcacaactac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298593 51 - 5917169 aaAAAAAATTGCA----------Agccaggga-------------cag----tagttcacacctgtaatcacaactac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260320 51 - 10531588 aaAaaaaattgca----------agccaggaa-------------cag----tagttcacgcctgtaatcacaactac i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679705 61 + 13852661 aatgataactgcaacaaaaaaatagccgggtg-------------ttg----tggcaggcgcctgttgtcctagttat i otoGar3.GL873566 I 102 C 0 s canFam3.chr5 80447661 55 + 88915250 ------AATTGTA-------------CAggggcgcctgggtggctcag----ttggttaagcatctgattttggctct i canFam3.chr5 C 0 I 112 e micMur3.chr20 54915765 137 + 72247402 I e mm10.chr8 22452521 168 - 129401213 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=1255035.000000 s hg38.chr16_GL383557v1_alt 29293 126 + 89672 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaatgatcatgccattgtactccaacctgggcaacagagtgaaaccctgtctct----aaaaaaa--aataataac s panTro5.chr16 21455372 125 - 81586097 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaatgatcatgccattgtactccaacctgggcaacagagtgaaaccctgtctct-----aaaaaa--aataataac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522127 126 - 90481686 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaatgatcatgccattgtactccaacctgggcaacagagtgaaaccctgtctct----aaaaaaa--aataataac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755070 126 + 3010529 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaatgatcatgccattgtactccaacctgggcaacagagtgaaaccctgtctct----aaaaaaa--aataataac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869285 128 + 163208435 tccagaggttaaggcaagaggatcacctgagtccaagagttcagggctgcagtaagcaatgatcatgccattgtactccaacctgggcaacagagtgaaaccttgtctcc----aaaaaaaataataataac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340733 125 - 74971481 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcatgccattgtactccaacctgggaaactgagtgaaactctgtctct-----aaaaaa--aaaaacaac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050072 128 - 78541002 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcatgccattgtactccaacctgggaaactgagtgaaactctgtctct--aaaaaaaaa--aaaaacaac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446029 126 + 26466322 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcatgccattgtactccaacctgggaaactgagtgaaactctgtctct----aaaaaaa--aataataac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770394 130 + 43916225 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcatgccattgtactccaacctgggaaactgagtgaaactctgtctctaaaaaaaaaaa--ataaaTAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207236 125 + 75399963 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcatgccattgtactccaacctgggaaactgagtgaaactctgtctct-----aaaaaa--aaaaataac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755863 126 - 7209941 tccagaggttaaggcaagaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcatgccattgtactccaacctgggaaactgagtgaaattctgtctct----aaaaaaa--aaaaaaaac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500432 125 + 3907144 tccagaggttaaggcaggaggatcacctgagcccaagagttcagggctgcagtaagcaacaatcacgccattgtactccaacctgggaaacagagtgaaactctgtctct-----aaaaaa--aaaaaaaac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509686 122 - 44557958 tccagaggttaaggcaagaggatcacctgggcccaaaaggccaaggctgcaataagcaatgatcatgctattgtactccaacctgggcaacaaagtgaaa--ctgtctct----taaaaag-taata---ac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6313983 125 + 6628207 tccagaggttaaggcaagaggatcacctgggcccaagagttcaaggctgcaataagcaatgatcttgctattgtactccaatctgggcaacaaagtgaaa--ctgtctct----aaaaaaa-TAATAATGAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298644 125 - 5917169 tccaggggttaaggcaagaggatcacctgagcccaagagttcaaggctgcagtaagcaatgatcatgctattgtactccaacctgggcaacaaagtgaaa--ctgtctct----aaaaaaa-TAATAATGAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260371 125 - 10531588 tccagaggttaaggcaagaggatcacctgggcccaagagttcaaggctgcaataagcaatgatcatgctattgtactccaacctgggcaacaaagtgaaa--ctgtctcc----aaaaaaa-taataataac i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679766 114 + 13852661 ttggaaggctgaggcaacagaattgctcgagcccaagagtttgaggttgctatgagctgggat---gccactgcactgtaccaagggcgatacagtgagatgctgtctcc----aaaaaaa----------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80447716 112 + 88915250 I e micMur3.chr20 54915765 137 + 72247402 I e mm10.chr8 22452521 168 - 129401213 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=1072903.000000 s hg38.chr16_GL383557v1_alt 29419 116 + 89672 aacaaaTAGATACTTTTTAAAAATTAAAAATAAATCATATACGTCTATTTTGATAAAC-AAAGATTTTTCTCCG----------TCTCTGACTTCAAAAGCTGCCCCTGAGCTCTATATACTTTTGT s panTro5.chr16 21455497 116 - 81586097 aacaaaTAGATACTTTTTAAAAATTGAAAATAAATTATATATGTCTATTTTGATAAAC-AAAGATTTTTCTCCG----------TCTCTGACTTCAAAAGCTGCCCCTGAGCTCTATATACTTTTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522253 116 - 90481686 aacaaaTAGATACTTTTTAAAAATTGAAAATAAATTATATATGTCTATTTTGATAAAC-AAAGATTTTTCTCCG----------TCTCTGACTTCAAAAGCTGCCCCTGAGCTCTATATACTTTTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755196 112 + 3010529 aacaaaTAGATACTTTTTAAAAATTAAAAATAAAT----TATGTCTATTTTGATAAAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGCCCCTGAGCTCTATATACTTTTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869413 110 + 163208435 aataaataaatactttttaaaaattaaaaataaaT--TATATGTCTATTTTGAT-----AAAGATTTTTCTCCG----------TCTCTGACTTCAAAAGCTGCCCCTGAGCTCCATATACTTTTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340858 112 - 74971481 aaCAA----ATACTTTTTAAAAACTAAAAATAAATTATATCTGTCTATTTTGATAGAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCCCTGAGCTCTATATATTTTTGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050200 112 - 78541002 aacaa----atactttttaaaaactaaaaataaaTTATATCTGTCTATTTTGATAGAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCCCTGAGCTCTATATATTTTTGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446155 112 + 26466322 aacaa----aTACTTTTTAAAAACTAAAAATAAATTATATCTGTCTATTTTGATAGAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCCCTGAGCTCTATATATTTTTGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770524 111 + 43916225 AACAA----ATACTTTTTAAAAACTAAAAATAAATTATATCTGTCTATTTTGATAGAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCCCTGAGCTCTATA-ATTTTTGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207361 112 + 75399963 aaCAA----ATAGTTTTTAAAAACTAAAAATAAATTATAGCTGTCTATTTTGATAGAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCCCTGAGCTCTATATATTTTTGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6755989 112 - 7209941 aacaa----aTACTTTTTAAAAACTAAAAATAAATTATATCTGTCTATTTTGATAGAC-AAAGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCCCTGAGCTCTATATATTTTTGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500557 110 + 3907144 aacaa----aTACTTTTTAAAAACTAAAAATAAATTACATCTGTCTATTTTGATAGAC---AGATTTTTCTCCA----------TCTCTGACTTCAAAAGCTGTCTCTGAGCTCTATATACTTTTGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509808 100 - 44557958 aataa----aTAC-ttttttaaattaaaaataaattatGTATGTCTACTTTGATAGAC-AAAGATTTTTCTCCAAC--------TCTCTGACTTCAAGAGCTGTCCCTGAGCTC------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314108 102 + 6628207 aataa----atacttttttttaattaaaaataaattatGTATGTCTACTTTGATAGAC-AAAGATTTTTCTCCATC--------TCTCTGACTTCAAGAGCTGTCCCTGAGCTCT------------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3298769 115 - 5917169 AATAA----ATACTTTTTTTAAGTTAAAAATAAATTATGTATGTCTACTTTGATAGACAAAAGATTCTTCTCCATC--------TCTCTGACTTCAAGAGCTGTCCCTGAGCTCTACATACTTTTGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260496 114 - 10531588 aataa----aTACTTTTTTTAAATTAAAAATAAATTATGTATGTCTACTTTGATAGAC-AAAGATTTTTCTCCATC--------TCTCTGACTTCAAGAGCTGTCCCTGAGCTCTACATACTTTTGT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679880 80 + 13852661 ---aa----aTGTTTT-----------------------CATGCTTATTTC----AAC-AAAGATTTTTCTCCATCACAATCTATCTCTGAATTCAAGACCTATCCCTGACCTCT------------ i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80447828 124 + 88915250 aataagtaaaattgttttaaaaaTTAAAA--AAATCATACATGACTATTTTGATAGAC-AAAGATTTTTCTCTATCCCAATCTATCTCTAACTTCAAGGCCTGCCCCTAAGTTCTGTATATTTTTGT i canFam3.chr5 I 112 C 0 e micMur3.chr20 54915765 137 + 72247402 I e mm10.chr8 22452521 168 - 129401213 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=13140.000000 s hg38.chr16_GL383557v1_alt 29535 2 + 89672 TG s panTro5.chr16 21455613 2 - 81586097 TG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522369 2 - 90481686 TG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755308 2 + 3010529 TG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869523 2 + 163208435 TG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21340970 2 - 74971481 TG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050312 2 - 78541002 TG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446267 2 + 26466322 TG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770635 2 + 43916225 TG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207473 2 + 75399963 TG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756101 2 - 7209941 TG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500667 2 + 3907144 TG i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3298884 2 - 5917169 TG i cebCap1.NW_016107433v1 C 0 I 346 s aotNan1.NW_018500622v1 9260610 1 - 10531588 T- i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22452689 2 - 129401213 cG i mm10.chr8 I 168 C 0 s canFam3.chr5 80447952 2 + 88915250 TG i canFam3.chr5 C 0 I 4 e micMur3.chr20 54915765 137 + 72247402 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e saiBol1.JH378225 6314210 0 + 6628207 C e calJac3.chr20 21509908 0 - 44557958 C e otoGar3.GL873566 13679960 0 + 13852661 C a score=197245.000000 s hg38.chr16_GL383557v1_alt 29537 28 + 89672 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT s panTro5.chr16 21455615 28 - 81586097 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522371 28 - 90481686 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755310 28 + 3010529 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869525 28 + 163208435 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i nomLeu3.chr2 C 0 I 319 s rheMac8.chr20 21340972 28 - 74971481 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050314 28 - 78541002 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446269 28 + 26466322 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770637 28 + 43916225 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207475 28 + 75399963 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756103 28 - 7209941 AGCTCTA--------------TATACTTTTGTTGTT-----------------------------------------------------------CTACCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500669 28 + 3907144 AGCTCTA--------------TATACATTTGTTGTT-----------------------------------------------------------CTACCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509908 23 - 44557958 -----TA--------------CATACTTTTGTTGTT-----------------------------------------------------------CTACCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314210 23 + 6628207 -----TA--------------CATAGTTTTGTTGTT-----------------------------------------------------------CTACCT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9260611 9 - 10531588 ---------------------------------GTT-----------------------------------------------------------CTACCT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13679960 22 + 13852661 --CTCTA--------------TA----TTTGTTGTC-----------------------------------------------------------CCAGCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452691 28 - 129401213 AATGCTA--------------AGGATTTCAGTTGAC-----------------------------------------------------------TTAGCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80447958 101 + 88915250 AGTTATAAAATAATCATAAAGCATATTTTTGAAGTTGCTTAAAATTCATACAAAAGTAATGTTCAgggcagccccggtggtgcagcggtttagcgccgcct i canFam3.chr5 I 4 C 0 e micMur3.chr20 54915765 137 + 72247402 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e cebCap1.NW_016107433v1 3298886 346 - 5917169 I a score=139603.000000 s hg38.chr16_GL383557v1_alt 29565 23 + 89672 -----ATAAAAATATGATCTCAATG--CAG-------- s panTro5.chr16 21455643 23 - 81586097 -----ATAAAAATATGATCTCAATG--CAG-------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522399 23 - 90481686 -----ATAAAAATATGATCTCAATG--CAG-------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755338 25 + 3010529 -----ATAAAAATATGATCTTAATGCACAG-------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869872 25 + 163208435 -----ataaaaaTATGATCTTAATGCACAC-------- i nomLeu3.chr2 I 319 C 0 s rheMac8.chr20 21341000 25 - 74971481 -----ATAAAAATATGATCTTAATGCACAC-------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050342 25 - 78541002 -----ATAAAAATATGATCTTAATGCACAC-------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446297 25 + 26466322 -----ATAAAAATATGATCTTAATGCACAC-------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770665 25 + 43916225 -----ATAAAAATATGATCTTAATGCACAC-------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207503 25 + 75399963 -----ATAAAAATAAGATCTTAATGCACAC-------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756131 25 - 7209941 -----ATAAAAATATGATCTTAATGCACAC-------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500697 25 + 3907144 -----ATAAAAATATGATCTTAATGCACAC-------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509931 22 - 44557958 -----AT-AAAATATTATCTTAATGCAA---------- i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6314233 22 + 6628207 -----AT-AAAATATTATCTTAATGCAC---------- i saiBol1.JH378225 C 0 I 2 s aotNan1.NW_018500622v1 9260620 22 - 10531588 -----AT-AAAATATTATCTTAATGCAC---------- i aotNan1.NW_018500622v1 C 0 I 2 s otoGar3.GL873566 13679982 23 + 13852661 -----ATAAAAATGTCATAAATATACAC---------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452719 24 - 129401213 -----GGGAAAATA-GGTGACAATGAATAT-------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80448059 38 + 88915250 gcaacctcggggtatgatcctagagaccaaggatcgag i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915765 137 + 72247402 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e cebCap1.NW_016107433v1 3298886 346 - 5917169 I a score=109043.000000 s hg38.chr16_GL383557v1_alt 29588 11 + 89672 TTACAAACTTG------------------- s panTro5.chr16 21455666 11 - 81586097 TTACAAACTTG------------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522422 11 - 90481686 TTACAAACTTG------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755363 11 + 3010529 TTACAAACTTG------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869897 11 + 163208435 TTACAAAGTTG------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341025 11 - 74971481 TTACAAAGTTG------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050367 11 - 78541002 TTACAAAGTTG------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446322 11 + 26466322 TTACAAAGTTG------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770690 11 + 43916225 TTACAAAGTTG------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207528 11 + 75399963 TTACAAAGTTG------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756156 11 - 7209941 TTACAAAGTTG------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500722 11 + 3907144 TTACAAAGTTG------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509955 11 - 44557958 TTACAAAGTTG------------------- i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6314257 11 + 6628207 TTACAAAGTTG------------------- i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3299232 11 - 5917169 TTACAAACTTG------------------- i cebCap1.NW_016107433v1 I 346 C 0 s aotNan1.NW_018500622v1 9260644 11 - 10531588 TTACAAAGTTG------------------- i aotNan1.NW_018500622v1 I 2 C 0 s otoGar3.GL873566 13680005 11 + 13852661 TCGCAAAGGTG------------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452743 11 - 129401213 TTTCGAAGCTG------------------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80448097 30 + 88915250 tcccacgtccggctcccggcatagagcctg i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915765 137 + 72247402 I e proCoq1.NW_012152729v1 2925777 138 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I a score=570052.000000 s hg38.chr16_GL383557v1_alt 29599 36 + 89672 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA s panTro5.chr16 21455677 36 - 81586097 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522433 36 - 90481686 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755374 36 + 3010529 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869908 36 + 163208435 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341036 36 - 74971481 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050378 36 - 78541002 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446333 36 + 26466322 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770701 36 + 43916225 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207539 36 + 75399963 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756167 36 - 7209941 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500733 36 + 3907144 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATGTTCAAAATACCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21509966 36 - 44557958 ---------------------CC---------------TGAAATCCAT--------AGAAATGTGGTGTTCAAAATACCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314268 36 + 6628207 ---------------------CC---------------TGAAATCCAT--------AGAAATGTGATGTTCAAAATACCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3299243 36 - 5917169 ---------------------CC---------------TGAAATCCAT--------AGAAATGTGATGTTCGAAATACCA i cebCap1.NW_016107433v1 C 0 I 434 s aotNan1.NW_018500622v1 9260655 36 - 10531588 ---------------------CC---------------TGAAATCCAC--------AGAAATGTGATGTTCCAAATACCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54915902 36 + 72247402 ---------------------CT---------------TGAAATTCAT--------ACAAATGTAATGTTCAAAATACCA i micMur3.chr20 I 137 C 0 s proCoq1.NW_012152729v1 2925915 36 + 9850184 ---------------------CT---------------TGAAATTCAT--------AGAAATGTGATATTCAAAATACCA i proCoq1.NW_012152729v1 I 138 C 0 s otoGar3.GL873566 13680016 36 + 13852661 ---------------------CT---------------TGAGATTCAC--------AGAAATGTGATGTTCAAAATGCCA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452754 35 - 129401213 ---------------------CT---------------AGAAAGTCCC--------AGGAA-GTGATGTTCAAAGTACCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80448127 80 + 88915250 cttctccctctgcctctctctctgaataaataaataaataaaatatattaaaaaaaaAAAAAGTAATGTTCAAAATGCCA i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 906365 3461 + 1009443 I a score=19198.000000 s hg38.chr16_GL383557v1_alt 29635 3 + 89672 ATA- s panTro5.chr16 21455713 3 - 81586097 ATA- i panTro5.chr16 C 0 I 4 s panPan2.chr16 21522469 3 - 90481686 ATA- i panPan2.chr16 C 0 I 4 s gorGor5.CYUI01000018v1 755410 3 + 3010529 ATA- i gorGor5.CYUI01000018v1 C 0 I 4 s nomLeu3.chr2 53869944 3 + 163208435 ATA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341072 3 - 74971481 ATA- i rheMac8.chr20 C 0 I 4 s macFas5.chr20 21050414 3 - 78541002 ATA- i macFas5.chr20 C 0 I 4 s macNem1.NW_012011355v1 14446369 3 + 26466322 ATA- i macNem1.NW_012011355v1 C 0 I 4 s cerAty1.NW_011999143v1 20770737 3 + 43916225 ATA- i cerAty1.NW_011999143v1 C 0 I 4 s chlSab2.chr5 58207575 3 + 75399963 ATA- i chlSab2.chr5 C 0 I 4 s manLeu1.NW_012101698v1 6756203 3 - 7209941 ATA- i manLeu1.NW_012101698v1 C 0 I 4 s colAng1.NW_012123265v1 500769 3 + 3907144 ATA- i colAng1.NW_012123265v1 C 0 I 4 s calJac3.chr20 21510002 3 - 44557958 CTA- i calJac3.chr20 C 0 I 403 s saiBol1.JH378225 6314304 3 + 6628207 CTA- i saiBol1.JH378225 C 0 I 397 s aotNan1.NW_018500622v1 9260691 3 - 10531588 CTA- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54915938 3 + 72247402 CTA- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2925951 3 + 9850184 CTA- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13680052 3 + 13852661 GTA- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452789 3 - 129401213 TTA- i mm10.chr8 C 0 C 0 s canFam3.chr5 80448207 3 + 88915250 -TTC i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 906365 3461 + 1009443 I e cebCap1.NW_016107433v1 3299279 434 - 5917169 I a score=38220.000000 s hg38.chr16_GL383557v1_alt 29638 2 + 89672 AA s panTro5.chr16 21455720 2 - 81586097 AA i panTro5.chr16 I 4 C 0 s panPan2.chr16 21522476 2 - 90481686 AA i panPan2.chr16 I 4 C 0 s gorGor5.CYUI01000018v1 755417 2 + 3010529 AA i gorGor5.CYUI01000018v1 I 4 C 0 s nomLeu3.chr2 53869947 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341079 2 - 74971481 AA i rheMac8.chr20 I 4 C 0 s macFas5.chr20 21050421 2 - 78541002 AA i macFas5.chr20 I 4 C 0 s macNem1.NW_012011355v1 14446376 2 + 26466322 AA i macNem1.NW_012011355v1 I 4 C 0 s cerAty1.NW_011999143v1 20770744 2 + 43916225 AA i cerAty1.NW_011999143v1 I 4 C 0 s chlSab2.chr5 58207582 2 + 75399963 AA i chlSab2.chr5 I 4 C 0 s manLeu1.NW_012101698v1 6756210 2 - 7209941 AA i manLeu1.NW_012101698v1 I 4 C 0 s colAng1.NW_012123265v1 500776 2 + 3907144 AA i colAng1.NW_012123265v1 I 4 C 0 s calJac3.chr20 21510408 2 - 44557958 AA i calJac3.chr20 I 403 C 0 s saiBol1.JH378225 6314704 2 + 6628207 AA i saiBol1.JH378225 I 397 C 0 s cebCap1.NW_016107433v1 3299713 2 - 5917169 AA i cebCap1.NW_016107433v1 I 434 C 0 s aotNan1.NW_018500622v1 9260694 2 - 10531588 AA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54915941 2 + 72247402 AA i micMur3.chr20 C 0 I 266 s proCoq1.NW_012152729v1 2925954 2 + 9850184 AA i proCoq1.NW_012152729v1 C 0 I 2 s otoGar3.GL873566 13680055 2 + 13852661 AA i otoGar3.GL873566 C 0 I 2 s mm10.chr8 22452792 2 - 129401213 AA i mm10.chr8 C 0 C 0 s canFam3.chr5 80448210 2 + 88915250 AA i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 906365 3461 + 1009443 I a score=11849.000000 s hg38.chr16_GL383557v1_alt 29640 1 + 89672 A s panTro5.chr16 21455722 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522478 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755419 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869949 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341081 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050423 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446378 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770746 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207584 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756212 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500778 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21510410 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314706 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3299715 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260696 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 I 27 s mm10.chr8 22452794 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr5 80448212 1 + 88915250 A i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915943 266 + 72247402 I e proCoq1.NW_012152729v1 2925956 2 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e otoGar3.GL873566 13680057 2 + 13852661 I a score=292682.000000 s hg38.chr16_GL383557v1_alt 29641 28 + 89672 ----TACTGAAAATAATTTATTATTCACTTGA- s panTro5.chr16 21455723 28 - 81586097 ----TACTGAAAATAATTTATTATTCACTTGA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522479 28 - 90481686 ----TACTGAAAATAATTTATTATTCACTTGA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755420 28 + 3010529 ----TACTGAAAATAATTTATTATTCACTTGA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869950 28 + 163208435 ----TACCGAAAATAATTTATTATTCACTTGA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341082 28 - 74971481 ----TGCTGAAAATAATTTCTTACTCACTTGA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050424 28 - 78541002 ----TGCTGAAAATAATTTCTTACTCACTTGA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446379 28 + 26466322 ----TGCTGAAAATAATTTCTTACTAACTTGA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770747 28 + 43916225 ----TGCTGAAAATAATTTCTTACTCACTTGA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207585 28 + 75399963 ----TGCTGAAAATAATTTCTTACTCACTTGA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756213 28 - 7209941 ----TGCTGAAAATAATTTCTTACTCACTTGA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500779 28 + 3907144 ----TGCTGAAAATAATTTCTTATTCACTTGA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21510411 22 - 44557958 ----TACTGAAAATAATTTATTATTC------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314707 28 + 6628207 ----TACTGAAAATATTTTATTATTCACTTGA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3299716 28 - 5917169 ----TACTGAAAATAATTTATTATTCACTTGA- i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2925958 28 + 9850184 ----AAGTGAAAATAATTTATTACTCACTTGA- i proCoq1.NW_012152729v1 I 2 I 194 s otoGar3.GL873566 13680059 28 + 13852661 ----AAGTGAAAATAATTTATTATTCACTTAA- i otoGar3.GL873566 I 2 I 2 s mm10.chr8 22452795 18 - 129401213 ----TGTTGAGGCTGATTTAGA----------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80448213 33 + 88915250 TAAATGCTGGGAATAATTTATTATTCACTTTGG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915943 266 + 72247402 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=6947.000000 s hg38.chr16_GL383557v1_alt 29669 1 + 89672 C s panTro5.chr16 21455751 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522507 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755448 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869978 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341110 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050452 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446407 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770775 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207613 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756241 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500807 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6314735 1 + 6628207 C i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3299744 1 - 5917169 C i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13680089 1 + 13852661 T i otoGar3.GL873566 I 2 C 0 s canFam3.chr5 80448246 1 + 88915250 A i canFam3.chr5 C 0 C 0 e micMur3.chr20 54915943 266 + 72247402 I e mm10.chr8 22452813 0 - 129401213 C e proCoq1.NW_012152729v1 2925986 194 + 9850184 I e dasNov3.JH569970 906365 3461 + 1009443 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I e calJac3.chr20 21510433 0 - 44557958 C a score=24334.000000 s hg38.chr16_GL383557v1_alt 29670 3 + 89672 ATG s panTro5.chr16 21455752 3 - 81586097 ATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522508 3 - 90481686 ATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755449 3 + 3010529 ATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869979 3 + 163208435 ATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341111 3 - 74971481 ATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050453 3 - 78541002 ATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446408 3 + 26466322 ATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770776 3 + 43916225 ATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207614 3 + 75399963 ATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756242 3 - 7209941 ATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500808 3 + 3907144 ATG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6314736 3 + 6628207 ATG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3299745 3 - 5917169 ACG i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13680090 1 + 13852661 A-- i otoGar3.GL873566 C 0 I 1106 s mm10.chr8 22452813 1 - 129401213 --G i mm10.chr8 C 0 I 3 s canFam3.chr5 80448247 3 + 88915250 GTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 909826 3 + 1009443 ATG i dasNov3.JH569970 I 3461 C 0 e micMur3.chr20 54915943 266 + 72247402 I e proCoq1.NW_012152729v1 2925986 194 + 9850184 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I e calJac3.chr20 21510433 0 - 44557958 C a score=13365.000000 s hg38.chr16_GL383557v1_alt 29673 1 + 89672 T s panTro5.chr16 21455755 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522511 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755452 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869982 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341114 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050456 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446411 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770779 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207617 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756245 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 500811 1 + 3907144 T i colAng1.NW_012123265v1 C 0 I 312 s saiBol1.JH378225 6314739 1 + 6628207 T i saiBol1.JH378225 C 0 I 4 s cebCap1.NW_016107433v1 3299748 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2926180 1 + 9850184 T i proCoq1.NW_012152729v1 I 194 C 0 s otoGar3.GL873566 13681197 1 + 13852661 T i otoGar3.GL873566 I 1106 C 0 s mm10.chr8 22452817 1 - 129401213 T i mm10.chr8 I 3 C 0 s canFam3.chr5 80448250 1 + 88915250 T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 909829 1 + 1009443 C i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54915943 266 + 72247402 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I e calJac3.chr20 21510433 0 - 44557958 C a score=523667.000000 s hg38.chr16_GL383557v1_alt 29674 40 + 89672 CAAGCATTTTTTAAAAGCTCCAACA--AGCTCACCTGTACCT s panTro5.chr16 21455756 40 - 81586097 CAAGCATTTTTTAAAAGCTCCAACA--AGCTCACCTGTACCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522512 40 - 90481686 CAAGCATTTTTTAAAAGCTCCAACA--AGCTCACCTGTACCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755453 40 + 3010529 CAAGCATTTTTTAAAAGCTCCAACA--AGCTCACCTGTACCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53869983 40 + 163208435 CAAGCATTTTTTAAAAGCTCCAACA--AGCTCACCTGTACCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341115 40 - 74971481 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050457 40 - 78541002 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446412 40 + 26466322 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770780 40 + 43916225 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207618 40 + 75399963 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756246 40 - 7209941 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 501124 40 + 3907144 CAAGCATTTTTTAAAAGCTCCAACA--AGTTCACCTGTACCT i colAng1.NW_012123265v1 I 312 C 0 s calJac3.chr20 21510433 40 - 44557958 CAAGCATTTTTAAAAAGTTCCAATG--AGCTCACCCGTACTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314744 40 + 6628207 CAAGCATTTTTTAAAAGCTCCAACA--AGCTCACCTGTACCT i saiBol1.JH378225 I 4 C 0 s cebCap1.NW_016107433v1 3299749 40 - 5917169 CAAGCATTTTTAAAAAGCTCCAACG--AGCTCACCTGTACCT i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2926181 42 + 9850184 CAAGTATTTTTAAAAAGCTCCAACTATAGCTCACCTGTACCC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681198 39 + 13852661 CAAGCATTTTTAAAAAGCTCCAAGT---GCTCACCTAAATCC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452818 36 - 129401213 -AAAGGCTTTTCAAAGTCTCCATTT--GATG---CTGTACTG i mm10.chr8 C 0 C 0 s canFam3.chr5 80448251 39 + 88915250 CAAGAGTTTTTGAAAAGTTCCAACT--AGCTCGCCTGTACC- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 909830 40 + 1009443 CAAGAGTTTTTGAACAGCTCCAATT--AGCTCACCTGCACAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54915943 266 + 72247402 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=3305517.000000 s hg38.chr16_GL383557v1_alt 29714 226 + 89672 AAGCAAATTTATTATTCTGACTTTTGTTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCCTTTAATCTA---TATTATCTTCTGATGGTTTTAGAGCAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------cccccactttcagtccatgtggttctagg s panTro5.chr16 21455796 229 - 81586097 AAGCAAATTTATTATTCTGACTTTCGTTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATTATCTTCTGATGGTTCTAGAACAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------cccccactttcagtccatgtggttctagg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522552 229 - 90481686 AAGCAAATTTATTATTCTGACTTTCGTTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATTATCTTCTGATGGTTCTAGAACAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------cccccactttcagtccatgtggttctagg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755493 229 + 3010529 AAGCAAATTTATTATTCTGACTTTCGTTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATTATCTTCTGATGGTTTTAGAACAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------cccccactttcagtccatgtggttctagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870023 229 + 163208435 AAGCAAATTTATTATTCTGACTTTCATTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTACAACAAtgtaatgaatgtctgctatttatgcttgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------cccccactttcagtccatgtggttctagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341155 229 - 74971481 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTAGAATAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------ccgccactttcagtccatgtggttctagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050497 229 - 78541002 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTAGAATAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------ccgccactttcagtccatgtggttctagg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446452 229 + 26466322 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCCATATTATCATCTTCTGATGGTTTTAGAATAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------ccgccactttcagtccatgtggttctagg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20770820 229 + 43916225 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTAGAATAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgggaaa--------------------------------ccgccactttcagtccatgtggttctagg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58207658 229 + 75399963 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTAGAATAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaatatcaccttaattctcctttgagaaa--------------------------------ccgccactttcagtccatgtggttctagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756286 229 - 7209941 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTAGAATAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgggaaa--------------------------------tcgccactttcagtccatgtggttctagg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 501164 229 + 3907144 AAGCAAATTTATTATTCTGACTTTCATTTTATAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTATATTATCATCTTCTGATGGTTTTAGAACAAtgtaatgaatgtctgctatttatgcctgcctag------catccattcccccttcttctgttaacatcaccttaattctcctttgagaaa--------------------------------ccgctactttcagtccctgtggttctagg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21510473 229 - 44557958 AAGCAAATTTATTATTCTGACTTTCATTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TAATATGGTGGT---TTCTCATTTAATCTCTATTATCATCTTCTGATGGTTTTACAACAAtgtaatgaatgtctactatttatgcctgcctag------catccactcccccttcttctgttaacatcaccttaattctcgtttgagaaa--------------------------------cccctactgttagtccatgtggttctagg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6314784 229 + 6628207 AAGCAAATTTATTATTCTGTCTTTCATTTTACAGTTGTCT--ATAATGTTTCTAAATCTCT----TAATAGGGTGGC---TTCTCATTTAATCTCTATTATCATCTTCTGATGGTTTTGGAACAAtgtaatgaatgtctactatttatgcctgcctag------catccacttccccttcttctgttaatatcaccttaattctcttttgagaaa--------------------------------cccctacttttagtccatatggttctagg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3299789 229 - 5917169 AAGCAAATTTATTATTCTGACTTTCATTTTACAGCTGTCT--ATAATGTTTCTAAATCTCT----TCATATGGTGGT---TTCTCATTTAATCTCTATTATCATCTTCTGATGGTTTTAGAACAAtgtaatgaatgtctactatttatgcctgcctag------catccacttcccattcttctgttaacatcaccttaattctcctttgagaaa--------------------------------cccctacttttagtccatgtggttctagg i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916209 231 + 72247402 AAGCAAATTTATTATTCTGACTTTCATTTTATGGCTGTCT--ATAAAATTTCTAAATCTCT----TAATATGGTAGT---TTGTCATTCAATTGC---TAACATCTTCTGATGTTTTTAGAACAAtgtagtggatgtctgctgtttaggtctacctagtagtcacatccatttctccttcttctggtaacatc-ccttgattatcctttgagaaa--------------------------------cccccactttcagtccatgtggttccatg i micMur3.chr20 I 266 C 0 s proCoq1.NW_012152729v1 2926223 236 + 9850184 AAGCAAATTTATTATTCTGGCTTTCATTTTATGGCTGTCT--ATATAAGTTCTAAATCTCTTAACTAATATGGTAGT---TTCTCTTTCGATCTG---TAATATCTTCTGATGTTTTTGGAACAAtgtagtggatgtctgctgtttaggtctacctagtagccacagctatttctccttcttctggttatatcatcttgattatcctttaagaaa--------------------------------cccccactttcagtccgtgtggttccatg i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681237 235 + 13852661 -AAGAAATTTATTATTCTGGCCTTCATTTTACAGCTATCT--ATAAAATTTCTAAATCTCTTAAGTAATATGGTGGT---TTCTCTTTCAATCTC---TAATACTGTCTGATGTTTTCAGAACAACAtagtacatgtctgctgtttatgtctacctagtagccacatctattttcccttcttctggtaacatcaccttgattatcctttgagaaa--------------------------------cccccactttcagtccctgtggtttccag i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22452854 216 - 129401213 CAGCAAACCCATTCTCTT----TTCTTTCTAGAGCTATCC--ACAG-ACTCCTAAAGCTCAGCACTAATATGATAGT---TTCTAAGTTCATCTCTGTCA------TCTGGCGTTTCTAGAACAAtgtagtggccatctactgtttatagctgc--agc-----catccattcagc-----tttggtaacaccacctttattatcctgcgagaaa--------------------------------ctcgcgccttcagtttatgtgcttctagg i mm10.chr8 C 0 I 922 s canFam3.chr5 80448290 219 + 88915250 ---CAAGTCTATTCTTCCTACTTCCCTTTTATACCTGTCT--ATAAAGTTTCTAAATCTCT----TAATACAGTAAT---TTCTCATTTAATCTTTAATACCATCTTCTGATGTTTCTAGAATGTCATAGTGGATGTCTGTTGTTTATGTCTGCCTAG------AATTCATTCTTCCTTCTTTTGGTAATACCACCTTTATTGTCCTTTGAGAAA--------------------------------TCCCTACTT----CCCATTTGGAGCC--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 909870 256 + 1009443 AAGTAAATTTATTGT---GGCTTTCCTTTTATAGCTGTCTAAATAAAGTTTCTAAATCTCTTAACTAATACGGTATTTAGTCTCCACTTAATCTTTATCAGCATCTTCT---GTCTTTAGAACAATGAAGTGGATATCCATTGTTTATGTCTGCTTGG------CATCCGTTCCCTTTTCTTCTGATAACATCACC-TGATTGTCCTTTGTGGACAATCAGGGGATGTCCAAATGTGAACTAACTCTCCCCCACTTTTGGCCTATTGGG------- i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=2400566.000000 s hg38.chr16_GL383557v1_alt 29940 203 + 89672 aaaattgccccattccctgggtacaggtctgaggtga--cctgatatag--gcctggccaaatagaacatctggta------cccctcagccacatgattggaaca-------tggatgagtaa-ggcccagtatttttggctggaatgactgggaaagagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca s panTro5.chr16 21456025 203 - 81586097 aaaattgccccattccctgggtacaggtctgaggtga--cctgatatag--gcctggccaaatagaacatctggta------cccctcagccacatgattggaaca-------tggatgagtaa-ggcccagtatttttggctggaatgactgggaaagagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522781 203 - 90481686 aaaattgccccattccctgggtacaggtctgaggtga--cctgatatag--gcctggccaaatagaacatctggta------cccctcagccacatgattggaaca-------tggatgagtaa-ggcccagtatttttggctggaatgactgggaaagagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755722 203 + 3010529 aaaattgccccattccctggatacagatctgaggtga--cctgatacag--gcctggccaaatagaacatctggca------cccctcagccatatgactggaaca-------tggatgagtaa-ggcccagtatttttggctggaatgactgggaaagagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870252 202 + 163208435 aaaattgccccattccctgggtacaggtctgaggtga--cctgatacac--gcctggccaaatagaacatctggta------cccc-cagccatatgattggaaca-------tggatgagtca-ggcccagtatttttggctggaatgactgggaaagagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------acggattttatataattttaat-ca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341384 201 - 74971481 aaaattgccccattccctgggtacaggtctgaagtga--cctgatatag--gcctggccaatcagaacatctggtt------ccccttggcc--atgattggaaca-------tggatgagtaa-gtcccaGTATTTCTGGCTGGAATgactgggaaacagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i rheMac8.chr20 C 0 I 4 s macFas5.chr20 21050726 201 - 78541002 aaaattgccccattccctgggtacaggtctgaagtga--cctgatatag--gcctggccaatcagaacatctggtt------ccccttggcc--atgattggaaca-------tggatgagtaa-gtcccaGTATTTCTGGCTGGAATgactgggaaacagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i macFas5.chr20 C 0 I 4 s macNem1.NW_012011355v1 14446681 201 + 26466322 aaaattgccccattccctgggtacaggtctgaagtga--cctgatatag--gcctggccaatcagaacatctggtt------ccccttggcc--atgattggaaca-------tggatgagtaa-gtcccaGTATTTCTGGCTGGAATgactgggaaacagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i macNem1.NW_012011355v1 C 0 I 4 s cerAty1.NW_011999143v1 20771049 201 + 43916225 aaaattgccccattccctgggtacaggtctgaggtga--cctgatatag--gcctggccaatcagaacatctggtt------ccccttggcc--atgattggaaca-------tggatgagtaa-gtcccaGTATTTTGGGCTGGAATgactgggaaacagatattacaaaga-catcagttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i cerAty1.NW_011999143v1 C 0 I 4 s chlSab2.chr5 58207887 201 + 75399963 aaaattgccccattccctgggtacaggtctgaggtga--cctgatacag--gcctggccaatcagaacatctggtt------ccttttggcc--atgattggaaca-------tggatgagtaa-gtcccaGTATTTTTGGCTGGAATGACTGGGAAACAGATATTACAAAGA-CATCAGTTCTCTCCAAATTAAATT---------------------------------------------------------------ATGGATTTAATATGATGTTAAT-CA i chlSab2.chr5 C 0 I 401 s manLeu1.NW_012101698v1 6756515 201 - 7209941 aaaattgccccattccctgagtacaggtctgaggtga--cctgatatag--gcctggccaatcagaaaatctggtt------ccccttggcc--atgattggaaca-------tggatgagtaa-gtcccaGTATTTTGGGCTGGAATgactgggaaacagatattataaaga-catccgttctctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i manLeu1.NW_012101698v1 C 0 I 4 s colAng1.NW_012123265v1 501393 201 + 3907144 aaaattgccccattccctgagtacaggtctgaggtga--cctgatatag--gcctggccaatcagaacatctggta------ccccttggcc--atgattggaaca-------tggatgagtaA-GGCCCAGTATTTTTGGCTGGAATgactgggaaacagatattacaaaga-catcagttctctctaaattaattt---------------------------------------------------------------atggatttaatataattttaat-ca i colAng1.NW_012123265v1 C 0 I 4 s calJac3.chr20 21510702 203 - 44557958 gaaattgcctcattccctgggtacaggtctgagatga--cttgatacag--ggctggccaatcagaacatctggta------cctcttggccatatgactggaaca-------tggatgagtaA-GGCCCAGTATTTCTGGGTGGCATGATTGTGAAAGAGatattacaaagt-catcagttcttgccaaattaattt---------------------------------------------------------------atagatttaatataattttaat-ca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315013 266 + 6628207 gaaattgccccattccctgggtacaggtctgaggtga--cctgatacag--gcctggccaatcagaacatctggaa------cctcttggccatatgactggaaca-------tagatgagtaA-GGCCCAGTATTTTTGGTTGGAATGATTGTGAAAGAGATATTACAAAGT-GATCAGTTCTCACAAAATTAATTTATAGAATTAATATAACACAGAGAGGTATTTGTGTGAAATAGGAAAAGGAATACATGTAATTCAATAGatttaatataattttaat-aa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300018 203 - 5917169 gaaattgccccattccctgggtacaggtctgaggtga--cctgatacag--gcctggccaatcagaacatctggta------cctcttggccatatgactgAAAGA-------TAGATGAGTAA-GGCCCAGTATTTTTGGTTGGAATGATTGTGAAAGAGatattacaaagt-gatcagttctcgccaaattaattt---------------------------------------------------------------atagatttaatacaatttttat-ca i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916440 200 + 72247402 ggagttgcctcattccc------caggtccaaggtgagtcctgatctag--gcctagccaatcacaacttctgata-------cccttggccatatgattggaaca-------tggatgagtaaaggaccAGTACTTTTGATTGGAATGATTGGGAAAAAGatactacaaagg-catcaattctttccaaattaattt---------------------------------------------------------------atggatttaatataattttaataaa i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926459 198 + 9850184 ggagttgcctcattccc------caggtccaaggtgagtcctgatctag--gcctggtcaatcacaacttctgata------gcccttggccatatgattggaaca-------tagatgagtaaaggaccAGTACTTTTGGTTGAAGTGATCGGGAAAGAGat--tacagagg-caccagtactctccaaattaattt---------------------------------------------------------------atggatttaatataattttaat-aa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681472 195 + 13852661 ggagttgcctcgttc-------------ccacagtgagtcctgatttaggcgcctggccaatcacaatttctgacatgattggaacatagccatatgattggaaga-------tggatgagtaagggattagtactttgga-tggaatgactgggaaagagata-cAtaaagattatcagttctctcaaaattaattt---------------------------------------------------------------gtgcatt-----taattatagt-ca i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80448509 194 + 88915250 ---CCTGccctattccctg------gctccaaggggagttctgatctgg--gcctggccaaccaaaacatcccata------ctcctt-gccacatgattggaaca-------tggatgagTGA-GATCTATTACTTCTTGC-AGAATgattgggaaagagagattacaaaga-cattagttttcttcaaattaattt---------------------------------------------------------------atgaatttaatacaactttaac-ca i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 910126 157 + 1009443 ------GTTCCAT-----------------------A--TCCTTTCTAG--ACCTGGCTAATGAG------TGGAA------C-----------ATGGCTGGAATATTATTTTTGGTGGAAT---GGTTGAATATTTTTAG-TGGAATGGTTG----AGAGatattacaaagt-cattaattttctccaaagcaattt---------------------------------------------------------------atggatctaatataatttcaat-ca i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=6516.000000 s hg38.chr16_GL383557v1_alt 30143 5 + 89672 aaatc- s panTro5.chr16 21456228 5 - 81586097 aaatc- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522984 5 - 90481686 aaatc- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755925 5 + 3010529 aaatc- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870454 5 + 163208435 aaatc- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341589 4 - 74971481 taat-- i rheMac8.chr20 I 4 C 0 s macFas5.chr20 21050931 4 - 78541002 taat-- i macFas5.chr20 I 4 C 0 s macNem1.NW_012011355v1 14446886 4 + 26466322 taat-- i macNem1.NW_012011355v1 I 4 C 0 s cerAty1.NW_011999143v1 20771254 4 + 43916225 taat-- i cerAty1.NW_011999143v1 I 4 C 0 s manLeu1.NW_012101698v1 6756720 4 - 7209941 taat-- i manLeu1.NW_012101698v1 I 4 C 0 s colAng1.NW_012123265v1 501598 4 + 3907144 taat-- i colAng1.NW_012123265v1 I 4 C 0 s calJac3.chr20 21510905 4 - 44557958 aaat-- i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6315279 4 + 6628207 aaat-- i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3300221 4 - 5917169 aaat-- i cebCap1.NW_016107433v1 C 0 I 1 s micMur3.chr20 54916640 4 + 72247402 aaat-- i micMur3.chr20 C 0 I 1 s proCoq1.NW_012152729v1 2926657 4 + 9850184 aaat-- i proCoq1.NW_012152729v1 C 0 I 1 s otoGar3.GL873566 13681667 4 + 13852661 agat-- i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80448703 4 + 88915250 aaat-- i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 910283 5 + 1009443 aaat-c i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I e chlSab2.chr5 58208088 401 + 75399963 I a score=158337.000000 s hg38.chr16_GL383557v1_alt 30148 11 + 89672 ccagagga-ttt s panTro5.chr16 21456233 11 - 81586097 ccagagga-ttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21522989 11 - 90481686 ccagagga-ttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755930 11 + 3010529 ccagagga-ttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870459 11 + 163208435 ccagagga-ttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341593 11 - 74971481 ccagagga-ttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21050935 11 - 78541002 ccagagga-ttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14446890 11 + 26466322 ccagagga-ttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20771258 11 + 43916225 ccagagga-ttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58208489 11 + 75399963 CCAGAGGA-TTT i chlSab2.chr5 I 401 C 0 s manLeu1.NW_012101698v1 6756724 11 - 7209941 ccagagga-ttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 501602 11 + 3907144 ccagagga-ttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21510910 11 - 44557958 ccagagaa-ttt i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6315284 11 + 6628207 CCAGAGGA-TTT i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3300226 11 - 5917169 ccagagga-ttt i cebCap1.NW_016107433v1 I 1 C 0 s micMur3.chr20 54916645 11 + 72247402 ccagaaga-ttt i micMur3.chr20 I 1 C 0 s proCoq1.NW_012152729v1 2926662 11 + 9850184 ccaaaaga-ttt i proCoq1.NW_012152729v1 I 1 C 0 s otoGar3.GL873566 13681672 11 + 13852661 ccaaaggt-ttt i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80448708 12 + 88915250 acaaagaatttt i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 910288 11 + 1009443 ccaAAGGA-CTg i dasNov3.JH569970 C 0 I 137 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=1888596.000000 s hg38.chr16_GL383557v1_alt 30159 144 + 89672 aagaatgataaaatcattccaaaatttatctggggaaataagtaactaTACT-ATACCAGCCGG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACTTGAATTACCAGATATTAAATGTTACAGCTAC s panTro5.chr16 21456244 144 - 81586097 aagaatgataaaatcattccaaaatttatctggggaaataagtaactaTACT-ATACCAGCCGG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCCCTTGAATTACCAGATATTAAATGTTACAGCTAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523000 144 - 90481686 aagaatgataaaatcattccaaaatttatctggggaaataagtaactaTACT-ATACCAGCCGG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCCCTTGAATTACCAGATATTAAATGTTACAGCTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 755941 144 + 3010529 aagaatgataaaatcattccaaaatttatctggggaaataagtaactaTACT-ATACCAGCCGG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACTTGAATTACCAGATATTAAATGTTACAGCTAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870470 144 + 163208435 aagaatgataaaatcattccaaaatttatctagagaaataagtaactaTACT-ATACCAGCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTAGAGTCCACTTGAATTACCAGATATTAAATGTTACAGCTAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21341604 144 - 74971481 aagaatgataaaatcattccaaaatttatctagagaAATAAGTAACTATACT-ATACCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACTTGAATTACCAGATATTAAATGTTATAGCTAC i rheMac8.chr20 C 0 I 329 s macFas5.chr20 21050946 144 - 78541002 aagaatgataaaatcattccaaaatttatctagagaAATAAGTAACTATACT-ATACCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACTTGAATCACCAGATATTAAATGTTATAGCTAC i macFas5.chr20 C 0 I 327 s macNem1.NW_012011355v1 14446901 144 + 26466322 aagaatgataaaatcattccaaaatttatctagagaAATAAGTAACTATACT-ATACCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTCGCTGGTACAGTCCACTTGAATTACCAGATATTAAATGTTATAGCTAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20771269 144 + 43916225 aagaatgataataccattccaaaatttatctagagaAATAAGTAACTATACT-ATACCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACTTGAATTACCAGATACTAAATGTTATAGCTAC i cerAty1.NW_011999143v1 C 0 I 315 s chlSab2.chr5 58208500 144 + 75399963 AAGAATGATAAAATCATTCCAAAATTTATCTAGAGAAATAAGTAACTATACT-ATACCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACTTGAATTACCAGATATTAAATGTTATAGCTAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6756735 144 - 7209941 aagaatgataatatcattccaaaatttatctagagaAATAAGTAACTATACT-ATACCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGGCTGGTACAGTCCACCTGAATTACCAGATACTAAATGTTATAGCTAC i manLeu1.NW_012101698v1 C 0 I 315 s colAng1.NW_012123265v1 501613 144 + 3907144 aagaatgataaaatcattccaaaatttatctagagaAATAAGTAACTATACT-ATATCATCCAG---------CAATTGTCTATTGTTACTTTTCAAATTTTTCTTGCCTGGTACAGTCCACTTGAATTACCAGATATTAAATGTTATAGCTAC i colAng1.NW_012123265v1 C 0 I 325 s calJac3.chr20 21510921 144 - 44557958 aataataataaaatcattccaaaatttatctggagaaataaGTAACTATACT-ATATCAGCCAG---------CAATTGTCTCTTGTTAGTTTTCAAATTTTTATTGGCTGGTACAGTCCACTTGAATTACCAGATATTATAAGTTACAGCTAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315295 141 + 6628207 AATAATAATAAAATCATTCCAAAATGTATCTGGAGAAATAAGGAACTATACT-ATACCAGCCAG---------CAATTGTCTCTTGTTCTTTTTCAAATTTTTATTGGCTGGGACAGTCCACTTGAATTACCAGA---TATAAGTTACAGCTAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300237 141 - 5917169 aataataataaaatcattccaatatttatctggaGAAATAAGTAACTCTACT-ATACCAGCCAG---------CAATTGTCTCTTGTTATTTTTCAAATTTTTATTGGCTGGTACGGTCCACTTcaattaccaga---tacaagttacagctac i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916656 137 + 72247402 AAGAACAATAAAATCACTGCAAAATTTTTTTGGAGTAGTAACTAACTACACT------AGCCAG---------CAACTGTTTCTTAT--TTTTTCAAAATTTTCTTGGCTGGTTTAGTCCACTTGAATTACCAGATATTAAATGTTAAAGCTAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926673 136 + 9850184 aggaatgataaaatcactccaaaattttcttggagaaataagtaactacact------agcCAG---------CAATTGTTTATTA---TTTTTCAGAATTTTCTTGGCTGGTGTAGTCCACTTGAATTACCAGATATTAAATGTTAAAGCTAC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681683 136 + 13852661 aagatagataaaattattccaaaatttttatgggaaaataaGTAACGACA--------AGCCAA---------CCACTCTCTGTTGTTATTTTTCAAAATTTTCTTGGCTGGTAGAGTAC-CTTTAATTAACAGATATTAAATGCTAACACCAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80448720 144 + 88915250 ttAAATTATTAAATCATTCCAAAATTTATCTGGAGAACTATATTCTTATACTTATGTCACCCTG---------CAATTGT-TATTGTTATTTTTCAAATTTTTCTTGACTGGTATAGCCCATTTGAATCATCAGATATTAAATGTTAAAGGTAg i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 910436 148 + 1009443 AAGACTGATAAAATCATTTCATTATTTATCTGGAGAAATAAGTGA----ACT-ATTCAAGCCAAGAAAAATTTCAAAGATCTTTTGTTATTTTTCAAATTTTTCTTGGCTGGTATAGTCCACTTGAAATACCAGATATTGAATGTTA-GGCTAT i dasNov3.JH569970 I 137 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=17290.000000 s hg38.chr16_GL383557v1_alt 30303 1 + 89672 A s panTro5.chr16 21456388 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523144 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756085 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870614 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342077 1 - 74971481 A i rheMac8.chr20 I 329 C 0 s macFas5.chr20 21051417 1 - 78541002 A i macFas5.chr20 I 327 C 0 s macNem1.NW_012011355v1 14447045 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20771728 1 + 43916225 A i cerAty1.NW_011999143v1 I 315 C 0 s chlSab2.chr5 58208644 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757194 1 - 7209941 a i manLeu1.NW_012101698v1 I 315 C 0 s colAng1.NW_012123265v1 502082 1 + 3907144 a i colAng1.NW_012123265v1 I 325 C 0 s calJac3.chr20 21511065 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315436 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300378 1 - 5917169 a i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916793 1 + 72247402 A i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926809 1 + 9850184 A i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681819 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80448864 1 + 88915250 a i canFam3.chr5 C 0 I 181 s dasNov3.JH569970 910584 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=85765.000000 s hg38.chr16_GL383557v1_alt 30304 8 + 89672 AAATACA----G s panTro5.chr16 21456389 8 - 81586097 AAATACA----G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523145 8 - 90481686 AAATACA----G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756086 8 + 3010529 AAATACA----G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870615 8 + 163208435 AAACACA----G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342078 8 - 74971481 AAATACA----G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051418 8 - 78541002 AAATACA----G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447046 8 + 26466322 AAATACA----G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20771729 8 + 43916225 AAATACA----G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58208645 8 + 75399963 AAATACA----G i chlSab2.chr5 C 0 I 316 s manLeu1.NW_012101698v1 6757195 8 - 7209941 aaaTACA----G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502083 8 + 3907144 aaaTACA----G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511066 12 - 44557958 AAATACCATATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315437 8 + 6628207 CAATACA----G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300379 8 - 5917169 aaataca----G i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916794 8 + 72247402 ATATACA----T i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926810 8 + 9850184 ATATACA----G i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681820 7 + 13852661 ACATACA----- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449046 8 + 88915250 GAACACA----G i canFam3.chr5 I 181 C 0 s dasNov3.JH569970 910585 8 + 1009443 ATATAGA----G i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=67276.000000 s hg38.chr16_GL383557v1_alt 30312 5 + 89672 TGTGG s panTro5.chr16 21456397 5 - 81586097 TGTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523153 5 - 90481686 TGTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756094 5 + 3010529 TGTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870623 5 + 163208435 TGTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342086 5 - 74971481 TGTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051426 5 - 78541002 TGTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447054 5 + 26466322 TGTGG i macNem1.NW_012011355v1 C 0 I 323 s cerAty1.NW_011999143v1 20771737 5 + 43916225 TGTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58208969 5 + 75399963 TGTGG i chlSab2.chr5 I 316 C 0 s manLeu1.NW_012101698v1 6757203 5 - 7209941 TGTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502091 5 + 3907144 TGTGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511078 5 - 44557958 TATGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315445 5 + 6628207 TATGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300387 5 - 5917169 TACGG i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916802 5 + 72247402 TGTAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926818 5 + 9850184 TGTGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13681827 4 + 13852661 -GTGA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449054 5 + 88915250 TTCAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 910593 5 + 1009443 TGTGG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=795179.000000 s hg38.chr16_GL383557v1_alt 30317 64 + 89672 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----CAATAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA s panTro5.chr16 21456402 64 - 81586097 CATGT---------------------------TA-CAAAACACTAAAATGGAATA----CAATAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523158 64 - 90481686 CATGT---------------------------TA-CAAAACACTAAAATGGAATA----CAATAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756099 64 + 3010529 TATGC---------------------------TA-CAAAACACTAAAATGGAATA----TAATAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870628 64 + 163208435 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TAATAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342091 64 - 74971481 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TACTAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051431 64 - 78541002 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TACTAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447382 63 + 26466322 TATGT---------------------------TA-C-AAACACTAAAATGGAATA----TACTAG-AAACTCCCAAATCAGAGCAGAGAATATAAAA i macNem1.NW_012011355v1 I 323 C 0 s cerAty1.NW_011999143v1 20771742 64 + 43916225 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TACTAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58208974 64 + 75399963 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TACTAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757208 64 - 7209941 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TACTAG-AAACTCCAGAATCAGAGCAGAGAATATAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502096 63 + 3907144 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TATTAG-AAACTCCAGAATCAGAGCGGAGAATAT-AAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511083 91 - 44557958 TATGTATACTAAAATGGAATATGTATGTTTAGTA-TGTAACACTAAAATGGAATA----TAATAC-ATACTCCAGAATCAGAGCAGGAAATATAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315450 64 + 6628207 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TAATAG-ATACTCCAGAATCAGAGCAGAGAATATAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300392 64 - 5917169 TATGT---------------------------TA-CAAAACACTAAAATGGAATA----TAATAG-ATACTCCAGAATCAGTGCAGAGAATATAAAA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916807 59 + 72247402 TATGT---------------------------TA-CAAAACACTCAAACAGAATA----T------GAAAACCAGAATCAGATCACAGAATAGAAAA i micMur3.chr20 C 0 I 5 s proCoq1.NW_012152729v1 2926823 64 + 9850184 TTTGT---------------------------TA-CAGAACACTCAaatagaata----taatag-aaaaaccagaatcaaatcatagaatagaaAA i proCoq1.NW_012152729v1 C 0 I 5 s otoGar3.GL873566 13681831 66 + 13852661 TATGT---------------------------TATTTAAACACTCAAATAGAACA----TAATAGAAAAAACCAAAATCAGATCATAGAATATAAAA i otoGar3.GL873566 C 0 I 247 s canFam3.chr5 80449059 68 + 88915250 AATGT---------------------------AA-AAAAACACTCAAATGAAAGAAATTTATTAG-AAAACCAAGAACAAGAGTGaaaaaaaaaaaa i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 910598 62 + 1009443 TTTGT---------------------------TA-CAAAACACTC--ATAGAATA----TAATAG-AAAATCCAGAGTCAGATCCCAGaatataaaa i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=78387.000000 s hg38.chr16_GL383557v1_alt 30381 10 + 89672 -----------------AGTGCTATTC s panTro5.chr16 21456466 10 - 81586097 -----------------AGTGCTATTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523222 10 - 90481686 -----------------AGTGCTATTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756163 10 + 3010529 -----------------AGTGCTATTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870692 10 + 163208435 -----------------AGTGCTATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342155 10 - 74971481 -----------------AGTGCTATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051495 10 - 78541002 -----------------AGTGCTATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447445 10 + 26466322 -----------------AGTGCTATTT i macNem1.NW_012011355v1 C 0 I 322 s cerAty1.NW_011999143v1 20771806 10 + 43916225 -----------------AGTGCTATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209038 10 + 75399963 -----------------AGTGCTATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757272 10 - 7209941 -----------------AGTGCTATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502159 10 + 3907144 -----------------AGTGCTATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511174 10 - 44557958 -----------------ATTGCTATTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315514 10 + 6628207 -----------------AGTGCTATTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300456 10 - 5917169 -----------------AGTGCTATTT i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916871 7 + 72247402 -----------------AGT---ATAT i micMur3.chr20 I 5 I 2 s proCoq1.NW_012152729v1 2926892 7 + 9850184 -----------------AGT---ATAT i proCoq1.NW_012152729v1 I 5 I 2 s otoGar3.GL873566 13682144 8 + 13852661 -----------------agtg--atat i otoGar3.GL873566 I 247 I 34 s canFam3.chr5 80449129 8 + 88915250 -----------------aata--attt i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 910660 27 + 1009443 attaagtacagggagctggtgtagctc i dasNov3.JH569970 C 0 I 92 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=13224.000000 s hg38.chr16_GL383557v1_alt 30391 1 + 89672 A s panTro5.chr16 21456476 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523232 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756173 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870702 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342165 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051505 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447777 1 + 26466322 a i macNem1.NW_012011355v1 I 322 C 0 s cerAty1.NW_011999143v1 20771816 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209048 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757282 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502169 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511184 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315524 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300466 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916880 1 + 72247402 A i micMur3.chr20 I 2 C 0 s proCoq1.NW_012152729v1 2926901 1 + 9850184 A i proCoq1.NW_012152729v1 I 2 C 0 s otoGar3.GL873566 13682186 1 + 13852661 a i otoGar3.GL873566 I 34 C 0 s canFam3.chr5 80449137 1 + 88915250 a i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 910779 1 + 1009443 a i dasNov3.JH569970 I 92 C 0 e mm10.chr8 22453070 922 - 129401213 I e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=384551.000000 s hg38.chr16_GL383557v1_alt 30392 26 + 89672 AAAAGGTATATTTAAAATCAATGAGA s panTro5.chr16 21456477 26 - 81586097 AAAAGGTATATTTAAAATCAATGAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523233 26 - 90481686 AAAAGGTATATTTAAAATCAATGAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756174 26 + 3010529 AAAAGGTATATTTAAAATCAATGAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870703 26 + 163208435 AAAAGGCATATTTAAAATCAATGAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342166 26 - 74971481 AAAAGGTATATTTAAAATCAATGAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051506 26 - 78541002 AAAAGGTATATTTAAAATCAATGAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447778 26 + 26466322 aaaaGGTATATTTAAAATCAATGAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20771817 26 + 43916225 AAAAGGTATATTTAAAATCAATGAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209049 26 + 75399963 AAAAGGTATATTTAAAATCAATGAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757283 26 - 7209941 AAAAGGTATATTTAAAATCAATGAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502170 26 + 3907144 AAAAGGCATATTTAAAATCAATGAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511185 26 - 44557958 AAAAGGTGTATTTCAAATCAACAAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315525 26 + 6628207 AAAAGGTGTATTTCAAATCAACAAGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300467 26 - 5917169 AAAAGGTGTATTTCAAATCAACAAGG i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54916881 26 + 72247402 AAAAGATATATTTCAAATCAATGAGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926902 26 + 9850184 AAAAGGTATATTTCAAATCAATGAGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13682187 26 + 13852661 acaaacTATATTTACAATCAATGAGG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22453992 26 - 129401213 AAAAGATGCATGACAAATCAATGACA i mm10.chr8 I 922 C 0 s canFam3.chr5 80449138 26 + 88915250 aaaaaGTGCTTTCAAATTCATTGAGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 910780 25 + 1009443 aaaaGGTGCATTTCAAGTCAATGAG- i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9260697 27 - 10531588 I a score=3411095.000000 s hg38.chr16_GL383557v1_alt 30418 228 + 89672 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcatattgcaccccatc--ctcaggcacactcattg-----cagatatcactaattaagcatagcacttgctactgctgaacccagatatggccttga---atccttccacatatggcactctaggcagccaccagc-aagctatcagacta-agcatgcaagaggattatttgacaaataatactgaggcaatca s panTro5.chr16 21456503 228 - 81586097 AAAGGACAGGTCACCTCATCCCAAGAGGggcagatgtatagcatgcatattgcaccccatc--ctcaggcacactcattg-----cagatatcactaattaagcatagcacttgttactgctgaacccagatatggccttga---atccttccacatatggcactctaggcagccaccagc-aagctatcagacta-agcatgcaagaggattatttgacaaataatactgaggcaatca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523259 228 - 90481686 AAAGGACAGGTCACCTCATCCCAAGAGGggcagatgtatagcatgcatattgcaccccatc--ctcaggcacactcattg-----cagatatcactaattaagcatagcacttgttactgctgaacccagatatggccttga---atccttccacatatggcactctaggcagccaccagc-aagctatcagacta-agcatgcaagaggattatttgacaaataatactgaggcaatca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756200 228 + 3010529 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcacgcatattgcaccccacc--ctcaggcacactcattg-----cagatatcactaattaagcatagcacttgttactgctgaacccagatatggccttga---atccttccacatatggcactctaggcagccaccagc-aagctatcagacta-agcatgcaagaggattatttgacaaataatactgaggcaatca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870729 228 + 163208435 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcatattgccccccatc--ctcaggcacactcattg-----cagacatcactaattaagcatagcacttgttactgctgaacccagatatggccttgg---atttttccccatatggcactctaggcagccaccacc-aagctatcagacca-agcatgcaagaggattatttgacaaataatgctgaggcaatca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342192 228 - 74971481 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcaaattgcaccccatc--ctcaggcacactcactg-----cagacatcactaattaagcatagcacttgttcctgctgaacccagatatggccttgg---atctttccccatatggcactctaggcagctaccacc-aagctatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051532 228 - 78541002 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcaaattgcaccccatc--ctcaggcacactcactg-----cagacatcactaattaagcatagcacttgttcctgctgaacccagatatggccttgg---atctttccccatatggcactctaggcagctaccacc-aagctatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14447804 228 + 26466322 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcaaattgcaccccatc--ctcaggcacactcactg-----cagacatcactaattaagcatagcacttgttcctgctgaacccagatatggccttgg---atctttccccatatggcactctaggcagctaccacc-aagctatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20771843 228 + 43916225 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcaaattgcaccccatc--ctcaggcacactcactg-----cagacatcactaattaagcatagcacttgttcctgctgaacccagatatggccttgg---atctttccccatatggcactctaggcagccaccacc-aagctatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209075 228 + 75399963 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcacgcaaattgcaccccatc--ctcaggcacactcactg-----cagacatcactaattaagcatagcacttgttcctgctgaacctagatatggccttgg---atctttccccatatagcactctaggcagccaccacc-aagctatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757309 228 - 7209941 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtatagcatgcaaattgcaccccatc--ctcaggcacactcactg-----cacacatcactaattaagcatagcacttgttcctgctgaacccagatatggccttgg---atctttccccatatggcactctaggcagccaccacc-aagctatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502196 228 + 3907144 AAAGGACAGGTCATCTCATCCcaagaagggcagatgtatagcatgcatattacaccccatc--ctcaggcacactcactg-----cagacatcagtaattaagcatagcacttgttcctgctgaacccagatatggccttgg---atctttccccatatggtactctaggcagccaccacc-aaactatcagacta-agcatgcaagaggattatttgacaaataatgctgaggtaatca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511211 228 - 44557958 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtgtggcatgcatattgtaccccatc--ctcaggcacactcactg-----aagatatcactaattaagcacagcacttgtacctgctcaacccagaaacagccttgg---atctttccccacatggcactctaggcagccaccacc-aatctatcagacca-agcatgcaagaggattatttCacaaataatgctgaggcaatca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315551 228 + 6628207 AAAGGACAGGTCATCTCATCCTAAGAGGggcagacgtgcagcatgcatattgtaccccatc--ctcaggcacactcactg-----cagatatcactaattaagcacagcacttgttcctgctcaacctagaaatggccttgg---atctttccccacatggcactctaggcagccaccacc-aatctatcagacta-agcatgcaagaggattatttCacaaataatgttgaggcaatca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300493 228 - 5917169 AAAGGACAGGTCATCTCATCCCAAGAGGggcagatgtgcagcatgcatattgtaccccatc--ctcaggtacactcactg-----cagatatcactaattaagcacagcacttgttcctgctcaacctagaaacagccttgg---atctttccccacatggcactctaggcagccaccacc-aatctatcagacta-agcatgcaagaggaTTAtttcacaaataatgctgaggcaatca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260724 227 - 10531588 AAAGGACAGGTCATCTCATCCCAAGAGGGGCAGATGTGCAGCATGCATATTGTACCCCATC--CTCAGGCACACTCACTG-----CAGATATCACTAATTAAGCACAGCACTTGTTCCTGCTCAACCCAGAAACGGCCTTGA---ATCTTT-CCCACATGGCACTCTGAGCAGCCACCACC-AATCTATCAGACTA-AGCATGCAAGAGGcttatttcacaaataatgctgaggcaatca i aotNan1.NW_018500622v1 I 27 C 0 s micMur3.chr20 54916907 227 + 72247402 AAAGGGCAGGTCA--CTATTCCTAGAGtggcagatgtgtagcatgtgtattgtcccccaca--cttgggcacactcattgcattgcagacatcactaattaagtgtagcactcattcctgctgaacccagatatggctttgg--aatctttccccacatggcactccaggaagccaccacc-a----atcaaACT--AGCATTCAAGAGGATTAtttgataaataatgctgaagaaatca i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2926928 226 + 9850184 AAAGGACAGGTCA--TTATTCCcagagtggcaggtgtgtagcatgtgtattgcaccccaca--cttgggcacactcgttgcattgcagacatcac-aattaagcattgcactcattcctgcggaacccagatgtggctttgg--aatcttttcccacatgacactccaggaagccaccacc-a----atcAGACT--AGCATTCAAGAGGATtatttgacaaataatgctgaagaaatca i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13682213 228 + 13852661 AAAGGACAGGTCA--TTATTCCCAGAGTGGCAGATGTGTGGCCTGTGTATTGCACTCCATA--CTTGGGCACACGTACTGCATCACAGGCATCACCAATTAAGCACAGCACTGGTTCCTGCTAAACACAGATATGGCTTTGG--AATCTTTCCCCACATAGCACTcagggaagccaccacc-a----atcagagta-agaatccaagaggattatttaacaaataatgctgaggaaatag i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22454018 174 - 129401213 AAAGGACAGGTCAT---------------------------------------------TC--CTAGGGTA--------G-----CAGACAGCACTAATTAAGTATATCAGTCATTCCAGCTGAATGCAGATATGGCTTTGATCTGTCTTTCTCCATATGGCACTCAGGATAGTCACCATCTGAACTATCAAACTT-AGAGTACAAAGGA-----CTGACAAATAATGCTGCAACAATCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80449164 222 + 88915250 AAAAACCAGGCCT-----TTCTAAGGGTGCCA-----ATTACATACATTGTTAACCTAACCGGGCAAGCCACCCTCTTTG-----AAGCAATCATTAATCAGGAAGAGC-TTCCTTCCTTTTAAGACCCGGATTGGCCTTGG-AAATCTTTCCCTAAATGGCACTCCAGCAAGCCCCCACA-AAGTATTCAAAGAACCACAACCAACAGCATAATTAAACAAAAATTGCTAAGACCGTCA i canFam3.chr5 C 0 I 319 s dasNov3.JH569970 910805 216 + 1009443 ACAGGACAGGCCA-----TTCCTAgggtggcaaatacgtagtatgcgtactataccccttc--cct-gacataatcactg-----cagacatcactaat----cacagcactctttcctgttgaacccagatacagctttgg--catcattccccacacagctatcca---caccactacc-aagctatcagatta-agcacataagaggattatttgacaaataatgctgtgacaatca i dasNov3.JH569970 C 0 C 0 a score=1199181.000000 s hg38.chr16_GL383557v1_alt 30646 73 + 89672 gttaactatttggaaaaacaaat-aaagtt-------aaacctctactgcataccatatgccaaaat-aaattctacataga s panTro5.chr16 21456731 73 - 81586097 gttaactatttggaaaaataaat-aaagtt-------aaacctctactgcataccatatgccaaaat-aaattctacataga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523487 73 - 90481686 gttaactatttggaaaaataaat-aaagtt-------aaacctctactgcataccatatgccaaaat-aaattctacataga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756428 73 + 3010529 gttaactatttggaaaaataaat-aaagtt-------aaacctctactgcataccatatgccaaaat-aaattctacataga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53870957 73 + 163208435 gttaactatttggaaaaataaat-aaagtt-------aaatctctactgcataccatatgccaaaat-aaattctacataga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342420 73 - 74971481 gttaactatttggaaaaataaat-aaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051760 73 - 78541002 gttaactatttggaaaaataaat-aaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448032 73 + 26466322 gttaactatttggaaaaataaat-aaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772071 73 + 43916225 gttaactatttggaaaaataaat-aaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209303 73 + 75399963 gttaactatttggaaaaataaat-aaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757537 73 - 7209941 gttaactatttggaaaaataaat-aaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502424 74 + 3907144 gttaactatttggaaaaataaataaaagtt-------aaacctctagtgcataccatatgccaaaat-aaattctacataga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511439 73 - 44557958 gttaactatttggaaaaataaat-aaagtt-------aaaccactactgcataccatatgccaaaac-aaattctacataga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315779 73 + 6628207 gttaactatttggaaaaataaat-aaagtt-------aaaccactactgcataccatatgccaaaat-aaattctacataga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300721 73 - 5917169 gttaactatttggaaaaataaat-aaagtt-------aagccactactgcataccatatgccaaaat-aaattctacataga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9260951 73 - 10531588 gttaactatttggaaaaataaat-aaagtt-------aaaccactactgcataccatatgccaaaat-aaattctacataga i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917134 69 + 72247402 gttacctgtttgcaaaaat-----aaagtt-------aaatctctactgcatcccatatgccaaaat-aaattctacataga i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927154 65 + 9850184 gttaactatttgtaaaaat-----aaaatt-------aaatctctactgcataccatatgccaaaat-aaattctaca---- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13682441 65 + 13852661 gttaacaacttacaaaaat-----aaagtt-------aaatctctaccacatattatatgccaaaat-aagttctaca---- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22454192 75 - 129401213 GCTGGCTATCTGAAAAAA--AAT-GGATTTTTTTTTCAGTTTTTCACTACACTGTATA---CAAGAT-AAAGTGTACATAGA i mm10.chr8 C 0 I 1348 s canFam3.chr5 80449705 71 + 88915250 GTTAACTATTTGGAAAAATA----AAAGTT-------AAATCTCTACTGCAGACGATATGTCAAAATAAAATTCTACATAGA i canFam3.chr5 I 319 C 0 s dasNov3.JH569970 911021 69 + 1009443 gttaactatttggaaaaat-----aaagtt-------aaatctctagtgcataccacatgccaaaat-aaattctaggaaga i dasNov3.JH569970 C 0 C 0 a score=469815.000000 s hg38.chr16_GL383557v1_alt 30719 29 + 89672 ttaagaagttaaatg--taagaattgaaacc s panTro5.chr16 21456804 29 - 81586097 ttaagaagttaaatg--taagaattgaaacc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523560 29 - 90481686 ttaagaagttaaatg--taagaattgaaacc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756501 29 + 3010529 ttaagaagttaaatg--taagaattgaaacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871030 29 + 163208435 ttaagaagttaaatg--taagaattgaaacc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342493 29 - 74971481 ttaagaagttaaatg--taagaattgaaacc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051833 29 - 78541002 ttaagaagttaaatg--taagaattgaaacc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448105 29 + 26466322 ttaagaagttaaatg--taagaattgaaacc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772144 29 + 43916225 ttaagaagttaaatg--taagaattgaaacc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209376 29 + 75399963 ttaagaagttaaatg--taagaattgaaacc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757610 29 - 7209941 ttaagaagttaaatg--taagaattgaaacc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502498 29 + 3907144 ttaagaagttaaatg--taagaattgaaacc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511512 29 - 44557958 ttaagaagttaaatg--taagaattgaaacc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315852 29 + 6628207 ttaagaagttaaatg--taagaattgaaacc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300794 29 - 5917169 ttaagaagttaaatg--taagaattgaaacc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9261024 29 - 10531588 ttaagaagttaaatg--taagaattaaaacc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917203 29 + 72247402 ttaaagagttaaata--taaaaaatgaaacc i micMur3.chr20 C 0 I 635 s proCoq1.NW_012152729v1 2927219 28 + 9850184 -taaagagttaaatg--taaaaaatgaaacc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13682506 28 + 13852661 -taaagagttaaatg--taaaaaacaaaacc i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449776 31 + 88915250 TTAAGAGTTAAAATACTTTTAAAATGAGGCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911090 29 + 1009443 ttaaagagttaaatg--taaaaactgaaacc i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I a score=772119.000000 s hg38.chr16_GL383557v1_alt 30748 53 + 89672 ataaaaggactagaataaagcTGTTGCAAAAGACATTCTcagagagaaacaga s panTro5.chr16 21456833 53 - 81586097 ataaaaggactagaataaagctgttgcaaaagacattctcagagagaaacaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523589 53 - 90481686 ataaaaggactagaataaagctgttgcaaaagacattctcagagagaaacaga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756530 53 + 3010529 ataaaaggactagaataaagctgttgcaaaagccattctcagagagaaacaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871059 53 + 163208435 ataaaaggactagaaaaaagctgttgcaaaagacattctcagacaGAAACAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342522 51 - 74971481 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCT--GAGAGAAACAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051862 51 - 78541002 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCT--GAGAGAAACAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448134 51 + 26466322 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCT--GAGAGAAACAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772173 51 + 43916225 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCT--GAGAGAAACAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209405 53 + 75399963 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCTCAGAGAGAAACAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757639 51 - 7209941 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCT--GAGAGAAACAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502527 53 + 3907144 ataaaaggactagaacaaagcTGTTGCAAAAGACATCCTcggagagaaagaga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511541 53 - 44557958 ataaaaggactggaacaaagcTGTTGCAAGAGACATTCTCAGAGAGAAACAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6315881 53 + 6628207 ataaaaggactggaacaaagcTGCTGCAAGAGACATTCTcagagagaaacaga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3300823 53 - 5917169 ataaaaggactggaacaaagcTGTTGCAAGAGACATTCTCAGAGACAAACAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9261053 53 - 10531588 ataaaaggactggaacaaagcTGTCGCAAGAGACATTCTCAGAGAGAAACAGA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2927247 52 + 9850184 ataaaaggactagaacaaagcTGCTAC-AAAGATATTCTGagagagaaacaga i proCoq1.NW_012152729v1 C 0 I 251 s otoGar3.GL873566 13682534 53 + 13852661 ataaaaggactaaaacaaagcTGCTGCAAAAGATATTCTcaaagagaaacaga i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449807 53 + 88915250 ATAAAAAGACTAAAACAAAGCTTTTGCAAAAGATATTCTcagagagaaacaga i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911119 53 + 1009443 ataaaaGGACTAGAATGTAGCTTTTGCAAAAGGTATGCTCAGAGAAAAAGAGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I a score=1253452.000000 s hg38.chr16_GL383557v1_alt 30801 117 + 89672 gaaa--ctgcaatgacaagaaatgggagac----ag--agcaactgtcctc-agcactgc---cttgggtttgtgacatttctgaggcg--------cagc----tcttcctgaagtcccgagacctgtctggttctttat s panTro5.chr16 21456886 117 - 81586097 gaaa--ctgcaatgagaagaaatgggagac----ag--agcaactgtcctc-agcactgc---cttgggttcgtgacatttctgaggcg--------cagc----tcttcctgaagtcccgagacctgtctggttctttat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523642 117 - 90481686 gaaa--ctgcaatgagaagaaatgggagac----ag--agcaactgtcctc-agcactgc---cttgggttcgtgacatttctgaggcg--------cagc----tcttcctgaagtcccgagacctgtctggttctttat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756583 117 + 3010529 gaaa--ctgcaatgagaagaaatgggagac----ag--agcaactgtcctc-agcactgc---cttgggtttgtgacatttctgaggcg--------cagc----ttttcctgaagtcccgagacctgtctggttctttat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871112 121 + 163208435 GAAA--CTGCAATGAGAAGAAATGGGAGACAGTAAG--AGCAACTGTCCTC-AGTACTGC---CTTAGGTTCATGACATttctgaggcg--------cagc----tcttcctgaagtcctgagacctgtctggttctttat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342573 121 - 74971481 GAAGCTCTGCAATGAGAAGAAATGGGAGAGAGTAAG--AGCAACTGTCCTC-AGCACTGC---CTTGGGTTCCTGACA--Tctgaggcc--------cagc----tcttcctgaagtcctaagacctgtctggttctttat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21051913 121 - 78541002 GAAGCTCTGCAATGAGAAGAAATGGGAGAGAGTAAG--AGCAACTGTCCTC-AGCACTGC---CTTGGGTTCCTGACA--Tctgaggcc--------cagc----tcttcctgaagtcctaagacctgtctggttctttat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448185 121 + 26466322 GAAGCTCTGCAATGAGAAGAAATGGGAGAGAGTAAG--AGCAACTGTCCTC-AGCACTGC---CTTGGGTTCCTGACA--Tctgaggcc--------cagc----tcttcctgaagtcctaagacctgtctggttctttat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772224 121 + 43916225 GAAGCTCTGCAATGAGAAGAAATGGGAGAGAGTAAG--AGCAACTGTTCTC-AGCACTGC---CTTGGGTTCCTGACA--Tctgaggcc--------cagc----tcttcctgaagtcctaagacctgtctggttctttat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209458 121 + 75399963 GAAGCTCTGCAATGAGAAGAAATGGGAGAGAGTAAG--AGCAACTGTCCTC-AGCACTGC---CTTGGGTTCCTGACA--Tctgaggca--------cagc----tcttcctgaagtcctaagacctgtctggttctttat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757690 121 - 7209941 GAAGCTCTGCAATGAGAAGAAATGGGAGAGAGTAAG--AGCAACTGTCCTC-AGCACTGC---CTTGGGTTCCTGACA--Tcttaggcc--------cagc----tcttcctgaagtcctaagacctgtctggttctttat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502580 123 + 3907144 gaagctctgcaatgagaagaaatgggagagagtaag--agcaactgttctc-agcactgc---cttgggttcctgacatttctgaggcc--------cagc----tcttcctgaagtcctaagacctgtctgggtctttat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21511594 103 - 44557958 GAAGCTCTGCAATGAGGAGAAATGGGGAAGAATAAG--AGCAACTG------------------------TCCTGACATTTCTGAGGCC--------CAGT----TCTTCCTGAAGTCCTAACACCTGTCTGGCTCTTTAT i calJac3.chr20 C 0 I 311 s saiBol1.JH378225 6315934 123 + 6628207 gaagctctgcagtgaggagaaatgggagagaataag--agcaagtgtcctc-agcactgc---cttgggttcctgacatttctgaggcc--------cagc----tcttcctgaagtcctgacacctgtctggctctttat i saiBol1.JH378225 C 0 I 334 s cebCap1.NW_016107433v1 3300876 124 - 5917169 GAAGCTCTGCAGTGAGAAGAAATGCGGGAGAATAAG--AGCAAGTGTCCTCAAGCACTGC---CTTGGGTTCCTGACATTTCTGAGGCC--------CAGC----TCTTCCTGAAGTCCTGACACCTGTCTGGCTCTTTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9261106 123 - 10531588 GAAGCTCTGCAGTGAGGAGAAATAGGGGAGAATAAG--AGCAATTGTCCTC-AGCACTGC---CTTGGGTTCCTGACATttctgaggcc--------cagc----tcttcctgaagtcctgacatctgtctggatctttat i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13682587 97 + 13852661 gaagctctgagatgacaagaaatcag--------ag--aacagtggtgctg-------------------tcctgat---cctaaagcc--------cagctacttcttcctggagtcctgagacatgtttcgttat---- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449860 130 + 88915250 --agctctgagatgggacgtcgtgagagggagtgaggcaacagtggtcctc-agcactac---ctt-ggttcctcacatcactgaggcctggctccttagc----ttttcttggaatcctgagacttgtctgtatctttac i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911172 132 + 1009443 --AGCTCTGAGATAAGAAAAAATGAAAGAGTGAGAG--AACTATGGCCCTC-AGCACTGCTTATTTTGGTTCCTGCCATTCCTGAGACCTAGCTACTCAGC----TTTTCCTGGATTCCAGAGAACTGTCTGTTCCTGTAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I a score=5643.000000 s hg38.chr16_GL383557v1_alt 30918 1 + 89672 -a s panTro5.chr16 21457003 1 - 81586097 -a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523759 1 - 90481686 -a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756700 1 + 3010529 -a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871233 1 + 163208435 -a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342694 1 - 74971481 -a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052034 1 - 78541002 -a i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448306 1 + 26466322 -a i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772345 1 + 43916225 -a i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209579 1 + 75399963 -a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757811 1 - 7209941 -a i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502703 1 + 3907144 -a i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512008 1 - 44557958 -A i calJac3.chr20 I 311 C 0 s saiBol1.JH378225 6316391 1 + 6628207 -a i saiBol1.JH378225 I 334 C 0 s cebCap1.NW_016107433v1 3301000 1 - 5917169 -A i cebCap1.NW_016107433v1 C 0 I 329 s aotNan1.NW_018500622v1 9261229 1 - 10531588 -a i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13682684 1 + 13852661 -a i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449990 1 + 88915250 -a i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911304 1 + 1009443 C- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I a score=113388.000000 s hg38.chr16_GL383557v1_alt 30919 10 + 89672 acatctccat s panTro5.chr16 21457004 10 - 81586097 acatctccat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523760 10 - 90481686 acatctccat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756701 10 + 3010529 acatctccat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871234 10 + 163208435 atatctccat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342695 10 - 74971481 atatctccat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052035 10 - 78541002 atatctccat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448307 10 + 26466322 atatctccat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772346 10 + 43916225 atatctccat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209580 10 + 75399963 atatctccat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757812 10 - 7209941 atatctccat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502704 10 + 3907144 atatctccat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512009 10 - 44557958 ACACCTCCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316392 10 + 6628207 acacctccat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301330 10 - 5917169 ACACCTCCAT i cebCap1.NW_016107433v1 I 329 C 0 s aotNan1.NW_018500622v1 9261230 10 - 10531588 acacctcaat i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13682685 10 + 13852661 ataCCTGTAC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80449991 10 + 88915250 atactgccac i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911305 10 + 1009443 ATGCCCCCAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I a score=82654.000000 s hg38.chr16_GL383557v1_alt 30929 6 + 89672 cctttt s panTro5.chr16 21457014 6 - 81586097 cctttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523770 6 - 90481686 cctttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756711 6 + 3010529 cctttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871244 6 + 163208435 cctttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342705 6 - 74971481 cctttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052045 6 - 78541002 cctttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448317 6 + 26466322 cctttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772356 6 + 43916225 cctttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209590 6 + 75399963 cctttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757822 6 - 7209941 cctttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502714 6 + 3907144 cctttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512019 6 - 44557958 CCTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316402 6 + 6628207 cctttt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301340 6 - 5917169 CCtttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9261240 6 - 10531588 cctttt i aotNan1.NW_018500622v1 C 0 I 704 s canFam3.chr5 80450001 6 + 88915250 catttt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911315 6 + 1009443 CCTTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e otoGar3.GL873566 13682695 0 + 13852661 C a score=568877.000000 s hg38.chr16_GL383557v1_alt 30935 63 + 89672 atctgaactagtttaaatgggtttctgtgttttgaaacccaaagagc---------cttgaataaggcaTGT s panTro5.chr16 21457020 63 - 81586097 atttgaactagtttaaatgggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523776 63 - 90481686 atttgaactagtttaaatgggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756717 63 + 3010529 atttgaactagtttaaatgggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871250 63 + 163208435 atatgaactagtttaaatgggtttctgtgttttgaaacccaaggggc---------cttgaataaggcaTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342711 63 - 74971481 atttgaactcatttaaataggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaCGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052051 63 - 78541002 atttgaactcatttaaataggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaCGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448323 63 + 26466322 atttgaactcatttaaataggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaCGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772362 63 + 43916225 atttgaactcgtttaaataggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaCGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209596 63 + 75399963 atttgaactcatttaaataggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaTGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757828 63 - 7209941 atttgaactcgtttaaataggtttctgtgttttgaaacccaaggagc---------cttgaataaggcaCGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502720 58 + 3907144 atttgaactaatttaaatgggtttctgtgtt-----acccaaggagc---------cttgaaaaaggcaTGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512025 57 - 44557958 ATTTCAACTAGTTTAAATGGGTTTCTGTGTTTTGAAACCCAAGGAGC---------CTTGAAAAAG------ i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316408 66 + 6628207 atttcaactagtttaaatgggtttctgtgttttgaaacccaaggagcATTTTCTTTCTTGAAAAAG------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301346 57 - 5917169 atttcaactagtttaaatgggtttctgtgttttgaaacccaaggagc---------cttgaaaaag------ i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80450007 62 + 88915250 atctgagctagcttaaattggcttctgtgctttaaaactaaaagCA----------CAAAAATAAGGCACAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911321 63 + 1009443 ATGTGAAATGGTATGAATAGGTTTTTGTATACTGAAACAAAAAAAAA---------CTCAAATAAAACTCTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e aotNan1.NW_018500622v1 9261246 704 - 10531588 I e otoGar3.GL873566 13682695 0 + 13852661 C a score=232915.000000 s hg38.chr16_GL383557v1_alt 30998 22 + 89672 GCATTTTCTTTCTTTTTTAAAA- s panTro5.chr16 21457083 22 - 81586097 GCATTTTCTTTCTTTTTTAAAA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523839 22 - 90481686 GCATTTTCTTTCTTTTTTAAAA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756780 18 + 3010529 GCAT----TTTCTTTTTTAAAA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871313 22 + 163208435 GCATTTTCTTTCTTTTTTAAAA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342774 22 - 74971481 GCATTTTCTTTCTTTTTTAAAA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052114 22 - 78541002 GCATTTTCTTTCTTTTTTAAAA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448386 22 + 26466322 GCATTTTCTTTCTTTTTTAAAA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772425 22 + 43916225 GCATTTTCTTTCTTTTTTAAAA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209659 22 + 75399963 GTATTTTCTTTCTTTTTTAAAC- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757891 22 - 7209941 GCATTTTCTTTCTTTTTTAAAA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502778 22 + 3907144 GCATTTTCTTTCTTTTTTAAAA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512082 22 - 44557958 GCATTTTCTTTCTTTTTAAAAA- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316474 22 + 6628207 GCATTTTCTTTCTTTTTAAAAA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301403 22 - 5917169 gcaTTTTCTTTCTTTTTAAAAA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9261950 22 - 10531588 GCATTTTCTTTCTTTTTAAAAA- i aotNan1.NW_018500622v1 I 704 C 0 s canFam3.chr5 80450069 20 + 88915250 --ATACTTTCATTTTTTTAACA- i canFam3.chr5 C 0 I 102 s dasNov3.JH569970 911384 19 + 1009443 ----TCCTTTTCTTTTTCAAAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e otoGar3.GL873566 13682695 0 + 13852661 C a score=344593.000000 s hg38.chr16_GL383557v1_alt 31020 33 + 89672 TTTTTGTTAGTTGA---TCAATTCATCTTACCATAA s panTro5.chr16 21457105 33 - 81586097 TTTTTGTTAGTTGA---TCAATTCATCTTACCATAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523861 33 - 90481686 TTTTTGTTAGTTGA---TCAATTCATCTTACCATAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756798 33 + 3010529 TTTTTGTTAGTTGA---TCAATTCATCTTACCATAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871335 33 + 163208435 TTTTTGTTAGTTGG---TCAATTCATTTTACTATAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342796 33 - 74971481 TTTTTGTTAGTTGA---TCAATTCATTTTATTATAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052136 33 - 78541002 TTTTTGTTAGTTGA---TCAATTCATTTTATTATAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448408 33 + 26466322 TTTTTGTTAGTTGA---TCAATTCATTTTATTATAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772447 33 + 43916225 CTTTTGTTAGTTGA---TCAATTCATTTTATTATAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209681 33 + 75399963 TTTTTGTTAGTTGA---TCAATTCATTTTACTATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757913 33 - 7209941 CTTTTGTTAGTTGA---TCAATTCATTTTATTATAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502800 33 + 3907144 TTTTTGTTAGTTGA---TCAATTCATTTTACTATAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512104 33 - 44557958 TTTTTGTTAGTTGA---GCAATTCATTTTACTATAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316496 32 + 6628207 -TTTTGTTAGTTGA---GCAATTCATTTTACTATAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301425 32 - 5917169 -TTTTGTTAGTTGA---GCAATTCATTTTACTATAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9261972 33 - 10531588 TTTTTATTAGTTGA---GAAATTCATTTTACTGTAA i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 911403 36 + 1009443 TTTTTGATAGTTTGATCTCAACTCATTTCACtaaaa i dasNov3.JH569970 C 0 I 3 e canFam3.chr5 80450089 102 + 88915250 I e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e otoGar3.GL873566 13682695 0 + 13852661 C a score=38535.000000 s hg38.chr16_GL383557v1_alt 31053 5 + 89672 A----TAAG s panTro5.chr16 21457138 5 - 81586097 A----TAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523894 5 - 90481686 A----TAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756831 5 + 3010529 A----TAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871368 5 + 163208435 A----TTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342829 9 - 74971481 GTAAGTAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052169 9 - 78541002 ATAAGTAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448441 9 + 26466322 ATAAGTAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772480 9 + 43916225 ATAAGTAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209714 9 + 75399963 ATAAGTAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757946 9 - 7209941 ATAAGTAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502833 9 + 3907144 ATAAATAAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512137 9 - 44557958 ATAAATAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316528 9 + 6628207 ATAAATAAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301457 9 - 5917169 ATAAATAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262005 9 - 10531588 ATAAATAAG i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80450089 102 + 88915250 I e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e dasNov3.JH569970 911439 3 + 1009443 I e otoGar3.GL873566 13682695 0 + 13852661 C a score=476538.000000 s hg38.chr16_GL383557v1_alt 31058 44 + 89672 TCTGggctggacatggtggctcacacctgtaatcccagcacttt s panTro5.chr16 21457143 44 - 81586097 TCTGggctggacatggtggctcacacctgtaatcccagcacttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523899 44 - 90481686 TCTGggctggacatggtggctcacacctgtaatcccagcacttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756836 44 + 3010529 TCCGggctggacatggtggctcacacctgtaatcccagcacttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871373 44 + 163208435 TCTAggctggacatggtggctcacacctgtaatcccagcacttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342838 44 - 74971481 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052178 44 - 78541002 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448450 44 + 26466322 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772489 44 + 43916225 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209723 44 + 75399963 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757955 44 - 7209941 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502842 44 + 3907144 TTTAggctggacatggtggctcacacctgtaatcccagcacttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512146 33 - 44557958 TATAGGCCAGACATGG-----------tgtaatcccagcccttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316537 44 + 6628207 TATAggccagacatggtggctcacacctgtaatcccagcccttt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301466 44 - 5917169 TATAggccagacacggtggctcacacctgtaatcccagcccttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262014 44 - 10531588 TATAggccagacatggtggctcacacctgtaatcccagcccttt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13682695 44 + 13852661 TCCAggctaggcacagtggctcatgcctgtaatcctagcactct i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80450089 102 + 88915250 I e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e dasNov3.JH569970 911439 3 + 1009443 I a score=2411932.000000 s hg38.chr16_GL383557v1_alt 31102 259 + 89672 gggaggccgaggcagg----------cggatcac---ctgaggtcaggagtttga------gaccagcctggc----caacatggagaaaccctgtctctactaaaaa-tacaaaaattagccaggcac----ggtggcacacaccagt--aatccaagctacttgggagg------------------------------ccgaggcagg----agaatttcttgaacccaggagg-----cggaggttgcagtgagccgagatggtg---------------------------------------cctctgc-------------ac----tccagcctg----agcaacagagcaagacactgtctcaaaaaaaaa--------------aaaaaa--aa s panTro5.chr16 21457187 259 - 81586097 gggaggccgaggcagg----------cggatcac---ctgaggtcaggagtttga------gaccagcctggc----caacatggagaaaccctgtctctactaaaaa-tacaaaaattagccaggcat----ggtggcacacaccagt--aatccaagctacttgggagg------------------------------ctgaggcagg----agaatttcttgaacccaggagg-----cggaggttgcagtgagccgagatggtg---------------------------------------cctctgc-------------ac----tccagcctg----agcaacagagcgagacactgtctcaaaaaaaaa--------------aaaaaa--aa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21523943 259 - 90481686 gggaggccgaggcagg----------cggatcac---ctgaggtcaggagtttga------gaccagcctggc----caacatggagaaaccctgtctctactaaaaa-tacaaaaattagccaggcat----ggtggcacacaccagt--aatccaagctacttgggagg------------------------------ctgaggcagg----agaatttcttgaacccaggagg-----cggaggttgcagtgagctgagatggtg---------------------------------------cctctgc-------------ac----tccagcctg----agcaacagagcgagacactgtctcaaaaaaaaa--------------aaaaaa--aa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 756880 259 + 3010529 gggaggccgaggcagg----------tggatcac---ctgaggtcaggagtttga------gaccagcctggc----caacatggagaaaccctgtctctactaaaaa-cacaaaaattagccaggcat----ggtggcacacaccagt--aatccaagctacttgggagg------------------------------ctgaggcagg----agaatttcttgaacccaggagg-----cggaggttgcagtgagccgagatggtg---------------------------------------cctctgc-------------ac----tccagcctg----agcaacagagcgagacactgtctcaaaaaaaat--------------aaataa--at i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871417 259 + 163208435 gggaggctgaggcagg----------cggatcac---ctgaggtcaggagtttga------gaccagcctggc----caacatggagaaacccggtctctactgaaaa-tataaaaattagccaggcat----gatggcacataccagt--aatccaagctacttgggagg------------------------------ctggggcagg----agaatttcttgaacccaggagg-----cggaggttgcagtgagccgagatggtg---------------------------------------cctctgc-------------ac----tccagcctg----agcaacagagcgagactctgtttcaaaaaaaaa--------------aaaaaa--aa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21342882 259 - 74971481 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcaa------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaagattagccaggcat----ggtggcacataccagt--aatcccagctactttggagg------------------------------ctgagacagg----agaatttcttgaacccaggagg-----tagaggttgcagtgagccaagatggtg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagagcgagactctgtctccaaaaaaaa--------------aaaaaa--aa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052222 259 - 78541002 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcga------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaagattagccaggcat----ggtggcacataccagt--aatcccagctactttggagg------------------------------ctgagacagg----agaatttcttgaacccaggagg-----tagaggttgcagtgagccaagatggtg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagagcgagactctgtctccaaaaaaaa--------------aaaaaa--aa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448494 259 + 26466322 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcga------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaagattagccaggcat----ggtggcacataccagt--aatcccagctactttggaag------------------------------ctgagacagg----agaatttcttgaacccaggagg-----tagaggttgcagtgagccaagatggtg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagagcgagactctgtctccaaaaaaaa--------------aaaaaa--aa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772533 257 + 43916225 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcga------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaagattagccaggcat----ggtggcacataccagt--aatcccagccactttggagg------------------------------ctgagacagg----agaatttcttgaacccaggagg-----tagaggttgcagtgagccaagatagtg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagagcgaga--ctgtctccaaaaaaaa--------------aaaaaa--aa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58209767 257 + 75399963 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcga------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaagattagccaggcat----ggtggcacataccagt--aatcccagctactttggagg------------------------------ctgagacagg----agaatttcttgatcccaggagg-----tagaggttgcagtgagccgagatggtg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagagcaaga--ctctgtctccaaaaaa--------------aaaaaa--aa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6757999 257 - 7209941 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcaa------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaagattagccaggcat----ggtggcacataccagt--aatcccagccactttggagg------------------------------ctgagacagg----agaatttcttgaacccaggagg-----tagaggttgcagtgagccaagatagtg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagagcgaga--ctgtctccaaaaaaaa--------------aaaaaa--aa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 502886 259 + 3907144 gggaggctgaggcagg----------cagatcac---ctgaggtcaagagttcga------gaccagcctggc----caacatggagaaaccctgtctctactaaaac-tacaaaggttagccaggcat----ggtggcatataccagt--aatcccagctactttggagg------------------------------ctgagacagg----agaatttcttgaacccaggagg-----tagaggttgcagtgagccgagatgatg---------------------------------------cctctgc-------------ac----tccgtccta----agcaacagaacgagactctgtctccaaaaaaaa--------------aaaaaa--aa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512179 280 - 44557958 gtgaggctgagtcaga----------cagatcac---ctgaggttaggagtccaa------gaccagcctggc----caacatggagaaaccccatctctactaaaaattacaaaaattagccgggcct----gttggcacatacctgc--aatcttagctacttgggagg------------------------------ctgagacagg----agaattgcttgaacccaggagg-----tggaggttgcagtgagctgagatggtg---------------------------------------cctctac-------------actccatccagcctg----ggcaacagagtgagactctgtctccaaaaaaaacaaaaaaCAACAACAACAACAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316581 266 + 6628207 gtgaggctgagtcagg----------cagatcac---ctgaggtcaggagttcaa------gaccagcctggc----caacatacagaaaccccatctctactaaaaattacaaaaattagccgggcat----ggtggcacatacctgt--aatcttagctacttgggagg------------------------------ctgagacagg----agaattgcttgaatccaggaag-----tggaggttgcagtgagctaagatcatg---------------------------------------ccactgc-------------ac----tccagcctg----accaacagagtgaaactttgtctccaaaaaaaa--------aaCCACAACAAC--AA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301510 255 - 5917169 gtgaggcggagtcagg----------cagatcac---ctg--------------a------gaccagcctggc----caacatagagaagccccatgtctactaaaaattacaaaaattagccaggcgt----ggtggcacatacctgc--aatcttagctacttgggagg------------------------------ctgagacagg----acaattgcttgaacccaggagg-----tggaggttgcagtgagctgagatggtg---------------------------------------cctctgc-------------ac----ttcagcgtg----agcaacagagtgagactctgtctctgaaaaaac-----aacaacaacaacaac--aa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262058 268 - 10531588 gtgaggctgagtcagg----------cagatcac---ctgaggtcaggagatcaa------gaccagcctggc----caacatggagaaaccccatctctactaaaa--tacaaaaataagccaggcat----ggtggtgggcacctgt---gtcccaggtactcgggagg------------------------------ctgaggcagg----ataatcacttgagcctgggagt-----cagaggttgcagtgagctgagatggag---------------------------------------ccattgc-------------at----tccaacctg----ggtgacaggacgagactccatctcaaaaagtaa-----gacaaaaacaaaaaacaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13682739 242 + 13852661 gggaaac-----------------------tcac---atgagctcagtagtttca------gaccagcctgaa----caagaatgaga--ccctaggtctactaaaaaagagaaaactcagttgagtatagtgagtggcaggtggctat--agtcccagc-----------------------------------------cggaggcaga----aggatcacttaagctcaggagt-----ttgaggttgctgagagttaggatgatg---------------------------------------ccatggc-------------ac----tttggtctgtctagacaacagagtgagattctgtctctaaaaaaca--------------aaacaa--aa i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80450191 357 + 88915250 gggagcctgatgcagaactcgatcccaggatcatgcactgagg-cagatgctcaaccactgaaccacccaggcgtctcAATATA-------CTTTCATTTTTTAAAAA---GAAGCTTTTGTTgggcac-ctgggtggctca-gtcagttaaatatctgc--cttcggaagggagaagaaatgtgtgggaaatatcagaaagggagacagaacgtaaagactgctaactctgggaaacgaactaggggtggtagaaggggaggagggcggggggtgggagtgaatgggtgacgggcactgggtgttattctctacgttagtaaattgaac----accaataaa----aaaaataaaataaaa--------taaacataaa--------------aaaaaa--aa i canFam3.chr5 I 102 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e dasNov3.JH569970 911439 3 + 1009443 I a score=-96304.000000 s hg38.chr16_GL383557v1_alt 31361 11 + 89672 ---------aaaaaaaaaa------------------a s panTro5.chr16 21457446 23 - 81586097 ---------aaaaaaaaaaaaaaaaaaaaa------TA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524202 5 - 90481686 ---------aaGTA------------------------ i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757139 6 + 3010529 ---------aaaaa-----------------------a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871676 8 + 163208435 ---------aaaaaaa---------------------a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343141 7 - 74971481 ---------aaaaa----------------------aa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052481 7 - 78541002 ---------aaaaa----------------------aa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448753 2 + 26466322 ---------aa--------------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772790 4 + 43916225 ---------aa-------------------------aa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210024 2 + 75399963 ---------aa--------------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758256 2 - 7209941 ---------aa--------------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503145 28 + 3907144 ---------caaaaaaaaaaaaaaaaaaaa-aaaaGAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512459 2 - 44557958 ---------AA--------------------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316847 2 + 6628207 ---------AA--------------------------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301765 2 - 5917169 ---------ca--------------------------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262326 2 - 10531588 ---------aa--------------------------- i aotNan1.NW_018500622v1 C 0 I 37 s otoGar3.GL873566 13682981 29 + 13852661 ---------aaGAAGAAGAAAAGAAAAAAAGAAAAGAA i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80450548 2 + 88915250 ---------aa--------------------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911442 11 + 1009443 aaaaaattaaa--------------------------- i dasNov3.JH569970 I 3 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I a score=-3609.000000 s hg38.chr16_GL383557v1_alt 31372 1 + 89672 -G s panTro5.chr16 21457469 1 - 81586097 -G i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757145 1 + 3010529 -G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871684 1 + 163208435 -a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343148 1 - 74971481 -G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052488 1 - 78541002 -G i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20772794 1 + 43916225 -G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210026 1 + 75399963 -G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758258 1 - 7209941 -G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503173 1 + 3907144 -G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512461 1 - 44557958 -A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316849 1 + 6628207 -A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301767 1 - 5917169 -a i cebCap1.NW_016107433v1 C 0 I 10 s otoGar3.GL873566 13683011 1 + 13852661 -A i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80450550 1 + 88915250 -a i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911453 1 + 1009443 t- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e aotNan1.NW_018500622v1 9262328 37 - 10531588 I e panPan2.chr16 21524207 0 - 90481686 C e macNem1.NW_012011355v1 14448755 0 + 26466322 C a score=50993.000000 s hg38.chr16_GL383557v1_alt 31373 9 + 89672 TCTATACCA s panTro5.chr16 21457470 9 - 81586097 TCTATACCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524207 8 - 90481686 -CTATACCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757146 9 + 3010529 TCTATACCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871685 9 + 163208435 TCTATACCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343149 9 - 74971481 TTTATACCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052489 9 - 78541002 TTTATACCA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20772795 9 + 43916225 TCTATACCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210027 9 + 75399963 TCTATACCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758259 9 - 7209941 TCTATACCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503174 9 + 3907144 TCTGGACCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512462 8 - 44557958 -CGATACTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316850 8 + 6628207 -TGATACTG i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13683012 9 + 13852661 CCTGCACTC i otoGar3.GL873566 C 0 I 6 s canFam3.chr5 80450551 9 + 88915250 tatctgcct i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911454 9 + 1009443 tCTATACTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917232 635 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927299 251 + 9850184 I e aotNan1.NW_018500622v1 9262328 37 - 10531588 I e cebCap1.NW_016107433v1 3301768 10 - 5917169 I e macNem1.NW_012011355v1 14448755 0 + 26466322 C a score=10285.000000 s hg38.chr16_GL383557v1_alt 31382 1 + 89672 T s panTro5.chr16 21457479 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524215 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757155 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871694 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343158 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052498 1 - 78541002 T i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20772804 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210036 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758268 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503183 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512470 1 - 44557958 T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316858 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s micMur3.chr20 54917867 1 + 72247402 T i micMur3.chr20 I 635 C 0 s proCoq1.NW_012152729v1 2927550 1 + 9850184 T i proCoq1.NW_012152729v1 I 251 C 0 s otoGar3.GL873566 13683027 1 + 13852661 A i otoGar3.GL873566 I 6 C 0 s canFam3.chr5 80450560 1 + 88915250 t i canFam3.chr5 C 0 I 3 s dasNov3.JH569970 911463 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e aotNan1.NW_018500622v1 9262328 37 - 10531588 I e cebCap1.NW_016107433v1 3301768 10 - 5917169 I e macNem1.NW_012011355v1 14448755 0 + 26466322 C a score=144797.000000 s hg38.chr16_GL383557v1_alt 31383 11 + 89672 --CTGAGTCTCTT s panTro5.chr16 21457480 11 - 81586097 --CTGAGTCTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524216 11 - 90481686 --CTGAGTCTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757156 11 + 3010529 --CTGAGTCTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53871695 11 + 163208435 --CTGAGTCTCTT i nomLeu3.chr2 C 0 I 296 s rheMac8.chr20 21343159 11 - 74971481 --CTGAGTCTCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052499 11 - 78541002 --CTGAGTCTCTT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20772805 11 + 43916225 --CTGAGTCTCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210037 11 + 75399963 --CTGAGTCTCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758269 11 - 7209941 --CTGAGTCTCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503184 11 + 3907144 --CTGAGTCTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512471 11 - 44557958 --CTGAGTCTCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316859 11 + 6628207 --CTGAGTCTCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301778 11 - 5917169 --CTGAGTCTTTT i cebCap1.NW_016107433v1 I 10 C 0 s aotNan1.NW_018500622v1 9262365 11 - 10531588 --CTGAGTCTCTT i aotNan1.NW_018500622v1 I 37 C 0 s micMur3.chr20 54917868 11 + 72247402 --CTGAGTCCCTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927551 11 + 9850184 --CTGAGTCTCTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13683028 11 + 13852661 --CTGTACCAGTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80450564 5 + 88915250 --ctcag------ i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 911464 13 + 1009443 TTCGGAGTCTTTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e macNem1.NW_012011355v1 14448755 0 + 26466322 C a score=282878.000000 s hg38.chr16_GL383557v1_alt 31394 28 + 89672 TCAATGAAAAATTAAAGCTTCCA-ATTT-T s panTro5.chr16 21457491 28 - 81586097 TCAATGAAAAATTAAAGCTTCCA-ATTT-T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524227 28 - 90481686 TCAATGAAAAATTAAAGCTTCCA-ATTT-T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757167 28 + 3010529 TCAATGAAAAATTAAAGCTTCCA-ATTT-T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872002 28 + 163208435 TCAATGAAAAATTAAAGATTCCA-ATTT-T i nomLeu3.chr2 I 296 C 0 s rheMac8.chr20 21343170 28 - 74971481 TCAATGAAACACTAAAGCTTCCA-ATTT-T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052510 28 - 78541002 TCAATGAAACACTAAAGCTTCCA-ATTT-T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448755 15 + 26466322 -------------aaaGCTTCCA-ATTT-T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772816 28 + 43916225 TCAATGGAACATGAAAGCTTCCA-ATTT-T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210048 28 + 75399963 TCAATGAAACATTAAAGCTTCCA-ATTT-T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758280 28 - 7209941 TCAATGGAACATGAAAGCTTCCA-ATTT-T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503195 28 + 3907144 TCAATGAAACATTAAAGCTTCCA-ATTT-T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512482 28 - 44557958 TCAATGAAAAATTAAAGCTTCCA-ATTT-T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316870 28 + 6628207 TCAATGAAAAATTAAAGCTTTCA-ATTT-T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301789 28 - 5917169 TCAATGAAAAATTAAAGCTTCCA-ATTT-T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262376 28 - 10531588 TCAATGAAAAATTAAAGCTTCCA-ATTT-T i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917879 27 + 72247402 TCAATGAAAAATTAAAGCTTCCA-ATTT-- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927562 28 + 9850184 TCAATGAAAAATTAAAGCTTCCA-ATTTT- i proCoq1.NW_012152729v1 C 0 I 11 s otoGar3.GL873566 13683039 19 + 13852661 TGAAT---------AGGCTTCTATGCTT-- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80450569 7 + 88915250 gtcatga----------------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911477 25 + 1009443 TCAATGAAAAATAAAAACTTT---GTTT-- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I a score=119263.000000 s hg38.chr16_GL383557v1_alt 31422 10 + 89672 TCTAAGTGTA s panTro5.chr16 21457519 10 - 81586097 TCTAAGTGTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524255 10 - 90481686 TCTAAGTGTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757195 10 + 3010529 TCTAAGTGTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872030 10 + 163208435 TCTAAGTGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343198 10 - 74971481 TCTAAGTGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052538 10 - 78541002 TCTAAGTGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448770 10 + 26466322 TCTAAGTGTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772844 10 + 43916225 TCTAAGTGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210076 10 + 75399963 TCTAAGTGTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758308 10 - 7209941 TCTAAGTGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503223 10 + 3907144 TCTAAATGTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512510 10 - 44557958 TCTAAGTGTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316898 10 + 6628207 GCTAAGTGTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301817 10 - 5917169 TCTAAATGTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262404 10 - 10531588 TCTAAGTGTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917906 10 + 72247402 TCTAAGTGTG i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13683058 9 + 13852661 -TTGAAAGCC i otoGar3.GL873566 C 0 I 19 s canFam3.chr5 80450576 9 + 88915250 tctcagggt- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911502 10 + 1009443 TCCAAATATG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927590 11 + 9850184 I a score=101909.000000 s hg38.chr16_GL383557v1_alt 31432 20 + 89672 AGGTGTAAC--Tttttttttt---t s panTro5.chr16 21457529 18 - 81586097 AGGTGTAAC----TTTTtttt---t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524265 18 - 90481686 AGGTGTAAC----TTTTtttt---t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757205 18 + 3010529 AGGTGTAAC----TTTTtttt---t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872040 18 + 163208435 AGGTGTAAC----Tttttttt---t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343208 18 - 74971481 AGGTATAAt----tttttttt---t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052548 18 - 78541002 AGGTATAAt----tttttttt---t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448780 17 + 26466322 AGGTATAA-----tttttttt---t i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772854 16 + 43916225 AGGTATAA------ttttttt---t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210086 17 + 75399963 AGGTATAA-----tttttttt---t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758318 17 - 7209941 AGGTATAA-----tttttttt---t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503233 16 + 3907144 AGGTATAA------TTTtttt---t i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512520 17 - 44557958 AAGTGTAAC----TTTTTttt---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316908 17 + 6628207 AAGTGTAAC----TTTTTttt---- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301827 21 - 5917169 AAGTGTAACTTTTTTTTTttt---- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262414 20 - 10531588 AAGTGTAAC----TTTTTTTTTTT- i aotNan1.NW_018500622v1 C 0 I 324 s otoGar3.GL873566 13683086 18 + 13852661 ATGTACATT----TTCttttt---t i otoGar3.GL873566 I 19 I 14 e canFam3.chr5 80450585 0 + 88915250 C e micMur3.chr20 54917916 0 + 72247402 C e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927590 11 + 9850184 I e dasNov3.JH569970 911512 0 + 1009443 C a score=111318.000000 s hg38.chr16_GL383557v1_alt 31452 15 + 89672 tcatttttaaaatac s panTro5.chr16 21457547 15 - 81586097 tcatttttaaaatac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524283 15 - 90481686 tcatttttaaaatac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757223 15 + 3010529 tcatttttaaaatac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872058 15 + 163208435 cattttttaaaatac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343226 15 - 74971481 tcatttttaaaatac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052566 15 - 78541002 tcatttttaaaatac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448797 15 + 26466322 tcatttttaaaatac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772870 15 + 43916225 tcatttttaaaatac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210103 15 + 75399963 tcatttttaaaatac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758335 15 - 7209941 tcatttttaaaatac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503249 15 + 3907144 tcatttttaaaatac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512537 15 - 44557958 tcatatttaaaatag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316925 15 + 6628207 tcagatttaaaatag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301848 15 - 5917169 tcagatttaaaatag i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13683118 10 + 13852661 tcttttttgg----- i otoGar3.GL873566 I 14 C 0 s canFam3.chr5 80450585 8 + 88915250 -----cctaaaat-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54917916 0 + 72247402 C e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927590 11 + 9850184 I e dasNov3.JH569970 911512 0 + 1009443 C e aotNan1.NW_018500622v1 9262434 324 - 10531588 I a score=952027.000000 s hg38.chr16_GL383557v1_alt 31467 92 + 89672 agatggggtctcactaggttg-------------------------accaggatgatcttgaactcctggcctcaagtgatccta---ctgcctctgccttccaaagtgctgagattaca s panTro5.chr16 21457562 92 - 81586097 agatggggtctcactaggttg-------------------------accaggatgatcttgaactcctggcctcaagtgatccta---ctgcctctgccttccaaagtgctgagattaca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524298 92 - 90481686 agatggggtctcactaggttg-------------------------accaggatgatcttgaactcctggcctcaagtgatccta---ctgcctctgccttccaaagtgctgagattaca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757238 92 + 3010529 agatggggtctcactaggttg-------------------------accaggatgatcttgaactcctggcctcaagtgatccta---ctgcctctgccttccaaagtgctgagattaca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872073 92 + 163208435 agatggggtctcactaggttg-------------------------accaggatgatcttgaactcctggcttcaagtgatccta---ccgcctctgccttccaaagtgctgagattaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343241 92 - 74971481 aggttgggtctcactagattg-------------------------accaggatgatctcgaactcttggcctcaagtgatccta---ccacctctgccttccaaagtgctgagattaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052581 92 - 78541002 aggttgggtctcactagattg-------------------------accaggatgatctcgaactcttggcctcaagtgatccta---ccacctctgccttccaaagtgctgagattaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448812 92 + 26466322 aggttgggtctcactagattg-------------------------accaggatgatctcgaactcttggcctcaagtgatccta---ccacctctgccttccaaagtgctgagattaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772885 92 + 43916225 aggttgggtctcactagattg-------------------------accaggatgatcttgaactcttggcctcaagtgatccta---ccacctctgccttccaaagtgctgagattaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210118 92 + 75399963 aggttgggtctcactagattg-------------------------accaggatgatctcgaactcttggcctcaagtgatccta---ccacctctgccttccaaagtgctgagattaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758350 92 - 7209941 aggttgggtctcactagattg-------------------------accaggatgatctcgaactcttggcctcaagtgatccta---ccacctctgccttccaaagtgctgagattaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503264 92 + 3907144 agattgggtctcagtagattg-------------------------cccaggatgatctcgaactcttggcctcgagtgatccta---ccacctctgccttgcaaagtgctgagattaca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512552 92 - 44557958 agatgtggtctcactaggttg-------------------------accaggatgttcttgaactcttggcctcaagcgatcctc---ccacctctgccttcagaagtgctgagattaca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6316940 92 + 6628207 agatggggtctcactaggttg-------------------------accaggatgatcttaaactcttggcctcaagcgatcctc---ccacctctgccttccgaagtgctgagattaca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301863 92 - 5917169 agatggggtctcactaggttg-------------------------accaagatgatcttaaactcttggcctcaagtgatcctc---ctgcctctgccttccgaagtgctgagattaca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262758 92 - 10531588 agatggggtcacactaggttg-------------------------accaggatgatcttaaactcttggcctcaagcgatcctc---ccgcctctgccttctgaagtgctgagattaca i aotNan1.NW_018500622v1 I 324 C 0 s otoGar3.GL873566 13683128 117 + 13852661 agacagcatctcactttgttgcctagtctagggtactatggcatcaaccacagcaaccttaaattcctgagcccaagagatcctc---ctacctctgcatcctgagtagctgggactata i otoGar3.GL873566 C 0 I 281 s canFam3.chr5 80450593 52 + 88915250 ---tgaggcccctcttctctg-------------------------ctcag-----------------------cagggatcctacttctccctctgctcttc----------------- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54917916 0 + 72247402 C e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927590 11 + 9850184 I e dasNov3.JH569970 911512 0 + 1009443 C a score=236902.000000 s hg38.chr16_GL383557v1_alt 31559 23 + 89672 ggaatgaccaaccacacctgCCT s panTro5.chr16 21457654 23 - 81586097 ggaatgaccaaccacacctgCCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524390 23 - 90481686 ggaatgaccaaccacacctgCCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757330 23 + 3010529 ggaatgaccaaccacacctgCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872165 23 + 163208435 ggaatgaccaaccacacctgCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343333 23 - 74971481 ggaatgacccaccacacctgCCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052673 23 - 78541002 ggaatgacccaccacacctgCCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448904 23 + 26466322 ggaatgacccaccacacctgCCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20772977 23 + 43916225 ggaatgacccaccacacctgCCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210210 23 + 75399963 ggaatgacccaccacacctgCCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758442 23 - 7209941 ggaatgacccaccacacctgCCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503356 23 + 3907144 ggaatgacccaccacacTTGCCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512644 23 - 44557958 ggcatgactcaccacacccgCCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317032 23 + 6628207 ggcatgactcaccacaccggccT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301955 23 - 5917169 ggcatgactcaccacacctgCCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262850 23 - 10531588 ggcatgactcaccacacctgCCT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80450645 16 + 88915250 -------ccctgcccacttgccc i canFam3.chr5 C 0 C 0 e micMur3.chr20 54917916 0 + 72247402 C e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927590 11 + 9850184 I e dasNov3.JH569970 911512 0 + 1009443 C e otoGar3.GL873566 13683245 281 + 13852661 I a score=32015.000000 s hg38.chr16_GL383557v1_alt 31582 2 + 89672 AG s panTro5.chr16 21457677 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524413 2 - 90481686 AG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757353 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872188 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343356 2 - 74971481 AG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052696 2 - 78541002 AG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448927 2 + 26466322 AG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773000 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210233 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758465 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503379 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512667 2 - 44557958 AG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317055 2 + 6628207 AG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301978 2 - 5917169 AG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262873 2 - 10531588 AG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917916 2 + 72247402 AG i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13683526 2 + 13852661 AG i otoGar3.GL873566 I 281 C 0 s canFam3.chr5 80450661 2 + 88915250 ac i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 911512 2 + 1009443 AG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e proCoq1.NW_012152729v1 2927590 11 + 9850184 I a score=662584.000000 s hg38.chr16_GL383557v1_alt 31584 50 + 89672 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA s panTro5.chr16 21457679 50 - 81586097 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524415 50 - 90481686 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757355 50 + 3010529 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872190 50 + 163208435 GTGTAACATTTTACA-TGAAAGACAGATTAAATTCAAAAACA-------CACTG-CTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343358 50 - 74971481 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052698 50 - 78541002 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448929 50 + 26466322 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773002 50 + 43916225 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210235 50 + 75399963 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758467 50 - 7209941 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAATA-------CACTG-CTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503381 39 + 3907144 GTGTAACATTTTACA-TGCATGACAGATTAAATTCAAAAA------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512669 50 - 44557958 GTGTAACATTTTATA-TGCCTAACAGATTAAATTCAAAAATA-------CACTG-ATCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317057 48 + 6628207 GTGTAACATTTTATA-TGCAAGACAGATTAAATTCAAAAAT---------ACTG-ATCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3301980 50 - 5917169 GTGTAACATTTTATA-TGCATGATAGATTAAATTCAAAAATA-------CACTG-ATCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262875 50 - 10531588 GTGTAACATTTTATA-TGCATGAGAGATTAAATTCAAAAATA-------CACTG-ATCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917918 50 + 72247402 GTTTAACATTTTATG-TACACAACAGGTTAAATTGAAAAACA-------CACTA-TTCA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927601 50 + 9850184 GTGTAACATTTTATA-TACACAACAGATTAAACTGAAAAACA-------CTCTA-TTCA i proCoq1.NW_012152729v1 I 11 C 0 s otoGar3.GL873566 13683528 50 + 13852661 GTATAAAATTTTATA-TACACAATAGATTAAATTGAAAAATA-------CACTA-TTCA i otoGar3.GL873566 C 0 I 1886 s canFam3.chr5 80450665 55 + 88915250 gtgctctctctcaaa-taagtaaataa--aaactttaaaaTATTTTTTTTGTTG-ATCA i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 911514 52 + 1009443 GTATAACATTTTATATTACATGACAGATTAAATTGAAATACA-------TGCTACCTCA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I a score=245752.000000 s hg38.chr16_GL383557v1_alt 31634 20 + 89672 ACTTTCTCATCTATT----TCATT s panTro5.chr16 21457729 20 - 81586097 ACTTTCTCATCTATT----TCATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524465 20 - 90481686 ACTTTCTCATCTATT----TCATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757405 20 + 3010529 ACTTTCTCATCTATT----TCATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872240 20 + 163208435 ACTTTCTCACCTATT----TCATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343408 20 - 74971481 ACTTTCTCATCTATT----TCATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052748 20 - 78541002 ACTTTCTCATCTATT----TCATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448979 20 + 26466322 ACTTTCTCATCTATT----TCATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773052 20 + 43916225 ACTTTCTCATCTATT----TCATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210285 20 + 75399963 ACTTTCTCATCTATT----TCATT i chlSab2.chr5 C 0 I 305 s manLeu1.NW_012101698v1 6758517 20 - 7209941 ACTTTCTCATCTATT----TCATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503420 8 + 3907144 ------------GTT----TCATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512719 20 - 44557958 ACTTTCTCATCTATT----TCATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317105 20 + 6628207 ACTTTCTCATCTATT----TCATT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302030 20 - 5917169 ACTTTCTCATCTATT----TCATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262925 20 - 10531588 ACTTTCTCATCTATT----TCATT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917968 20 + 72247402 ACTTTCTCATCTATC----TCATT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927651 24 + 9850184 ACTTTCTCCTCTCTCTATATCATT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80450720 15 + 88915250 ACTCACTTTACTAAT--------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 911566 20 + 1009443 AATTTCTCATTGCTT----CCATT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=151864.000000 s hg38.chr16_GL383557v1_alt 31654 11 + 89672 AAGT---TTACTTT s panTro5.chr16 21457749 11 - 81586097 AAGT---TTACTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524485 11 - 90481686 AAGT---TTACTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757425 11 + 3010529 AAGT---TTACTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872260 11 + 163208435 AAGT---TTACTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343428 11 - 74971481 AAGT---TTACTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052768 11 - 78541002 AAGT---TTACTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14448999 11 + 26466322 AAGT---TTACTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773072 11 + 43916225 AAGT---TTACTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210610 11 + 75399963 aaGT---TTACTTT i chlSab2.chr5 I 305 C 0 s manLeu1.NW_012101698v1 6758537 11 - 7209941 AAGT---TTACTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503428 11 + 3907144 AAGT---TTACTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512739 11 - 44557958 AAGT---TGACTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317125 11 + 6628207 AAGT---TGACTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302050 11 - 5917169 AAGT---TGACTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262945 11 - 10531588 GAGT---TGACTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54917988 11 + 72247402 AAGT---TTCCTTT i micMur3.chr20 C 0 I 68 s proCoq1.NW_012152729v1 2927675 11 + 9850184 AAGT---TTACTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80450735 14 + 88915250 AAGTCTATGATTTT i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 911586 11 + 1009443 AAGC---TTATGTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=83279.000000 s hg38.chr16_GL383557v1_alt 31665 8 + 89672 CCATAACA s panTro5.chr16 21457760 8 - 81586097 CCATGACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524496 8 - 90481686 CCATGACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757436 8 + 3010529 CCATGACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872271 8 + 163208435 CCATGACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343439 8 - 74971481 CCATGACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052779 8 - 78541002 CCATGACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449010 8 + 26466322 CCATGACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773083 8 + 43916225 CCATGACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210621 8 + 75399963 CCATGACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758548 8 - 7209941 CCATGACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503439 8 + 3907144 CCATGACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512750 8 - 44557958 CCATGAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317136 8 + 6628207 CCATGAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302061 8 - 5917169 TCATGAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262956 8 - 10531588 CCATGAAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2927686 8 + 9850184 TCATAAAG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80450750 6 + 88915250 --CTGAGT i canFam3.chr5 I 1 I 2 s dasNov3.JH569970 911597 8 + 1009443 TCATAAAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54917999 68 + 72247402 I e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=2412468.000000 s hg38.chr16_GL383557v1_alt 31673 200 + 89672 CATTCAAGAT---AACTTACAAATTTTAAAGCAAGAGGGTCCGAACACagcaaaaagaaaaa---tgtagaaaaaccaaagcaaaaagaaaa---TTGCATTTCACATATTCTCAACTAATTAT-------AGCATTCTAGCAATGTCTTGGGGGT-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TATTTCTTTTATTATTT--TAAAAGGCAAATCTA-T s panTro5.chr16 21457768 200 - 81586097 CATTCAAGAT---AATTTACAAATTTTAAAGCAAGAGGGTCCGAACACAGCAAAAAGAAAAA---TGTAGAAAAACCAAAGCAAAAAGAAAA---TTGCATTTCACATATTCTCAACTAATTAT-------AGCATTCTAGCAATGTCTTGGGGGT-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TATTTCTTTTATTATTT--TAAAAGGCAAATCTA-T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524504 200 - 90481686 CATTCAAGAT---AATTTACAAATTTTAAAGCAAGAGGGTCCGAACACAGCAAAAAGAAAAA---TGTAGAAAAACCAAAGCAAAAAGAAAA---TTGCATTTCACATATTCTCAACTAATTAT-------AGCATTCTAGCAATGTCTTGGGGGT-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TATTTCTTTTATTATTT--TAAAAGGCAAATCTA-T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757444 200 + 3010529 CATTCAAGAT---AATTTACAAATTTTAAAGCAAGAGGGTCCGAACACagcaaaaagaaaaa---cgtagaaaaaccaaagcaaaaagaaaa---TTGCATTTCACATATTCTCAACTAATTAT-------AGCATTCTAGCAATGTCTCGGGGGT-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TAAAAGGCAAATCTA-T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872279 202 + 163208435 CATTCAAGAT---AATTTACAAATTTTAAAGCAAGAGGGTCAGAAGACAGCAGAAAGAAAAATGTTGTAGAAAAATCAAAGCAAAAA-AAAA---TTGCATTTCACATATTCTCAACTAATTGT-------AGCATTCTAGCATTGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TAAAAGGCAAATCTA-T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343447 201 - 74971481 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAGGGTCAGAAGATAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGAAAAA--AAAA---CTGTATTTCACATATTCTCAACTAACTGT-------AGCATTCTAGCAATGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052787 201 - 78541002 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAGGGTCAGAAGATAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGAAAAA--AAAA---CTGTATTTCACATATTCTCAACTAACTGT-------AGCATTCTAGCAATGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449018 201 + 26466322 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAGGGTCAGAAGATAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGAAAAA--AAAA---CTGTATTTCACATATTCTCAACTAATTGT-------AGCATTCTAGCAATGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773091 201 + 43916225 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAGGGTCAGAAGACAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGAAAAA--AAAA---TTGTATTTCACATATTCTCAACTAATTGT-------AGCATTCTAGCAATGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210629 201 + 75399963 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAGGGTCAGAAGACAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGAAAAA--AAAA---TTGTATTTCACATATTCTCAACTAATTGT-------AGCATTCTAGCAATGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758556 201 - 7209941 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAGGGTCAGAAGACAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGAAAAA--AAAA---TTGTATTTCACATATTCTCAACTAATTGT-------AGCATTCTAGCAATGTCTTGGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503447 201 + 3907144 CATTCAAGAT---AATTTACACATTTTAAAGCAAGAAAGTCAGAAGACAGCAAAAAGAAAAATGTTGTAGAAAAACCAAAGGAAAA--AAAA---TTGTATTTCACATATTCTCAACTAATTGT-------AGCATTCTAGCAATGTCTTAGGGGC-------CAG---------------AAATAAAGCCAAGTTTGAATTTTA-TAATTCTTTTATTATTT--TGAAAGGCAAATCTA-T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512758 204 - 44557958 CATTCAAAAT---AATTTTCAAATTTTAAAGCAAGAGGGTCAGAAGACAGCAAAAAGAAAAACGTTGCAGAAAAGTCAAAGCAATAAAAAAA---TTTCATTTCATATATTCTCAAATAATTGT-------AGCATTCTAACAATGTCTTGGAGGC-------CAG---------------ATATAAAGACACGTTTGAATTTTA-TAATTC-TTTATCATTT-CTAAAACACAAACCTACT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317144 205 + 6628207 CATTCAAAAT---AATTCACTAATTTTAAAGCAAGAGGGTCAAAAGACAGAAAAAGGAAAAATGTTGCAGAAAAGTCAAAGCAATAAAAAAA---TTTCATTTCACATATTCTCAAATAATTGT-------AGCACTCTAACAACGTCTTGGGGGC-------CAG---------------ATATAAAGCCACGTTTGAATTTTA-TATTTCTTTTATCATTT-CTAAAACACAAACCTACT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302069 205 - 5917169 CATTCAAAAC---AATTCACAAATTTTAAAGCAAGAGGGTCAGAAGACAGCAAAAAGAAAAATGTTGCAGAAAAGTCAAAGCAATAAAAAAA---TTTCATTTCACATATTCTCAAATAATTGT-------AGCATTCTAACAACGTCTTGGGGGC-------CAG---------------ATATAAAGTCATGTTTGAATTTTA-TAATTCTTTTATCATTT-CTAAAACACAAACCTACT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9262964 205 - 10531588 CATTCAAAAT---AATTTACAAATTTTAAAACAAGAGGGTCAGAAGACAGCAAAAAGGAAAATGTTGCAGAAAAGTCAAAGCAATAAAAAAT---TTTCATTTTACATATTCTCAAATAATTGT-------AGCATTCTAACAATGTCTTGGGGAC-------CAA---------------ATATAAAGCCACGTTTGAATTTTA-TAATTCTTTTATCATTG-CTAAAACACAAACCTAAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918067 215 + 72247402 CATTCTAGAC---AATTTGCAAATTTAAAAGCAAGAGGGTGAGAAGACAACAAAAAGAAAAATGTTGCAGAAAAGCCAAAGTAAATTTAAAA-TTTTGCATTTCACATATTCTTAACTAGTTATATGTCAAAGCATACCAGCAATGTCTTGGAAGC-------CAG---------------AAATGAAGCCAAGTTTGAATCTTCTTAATTCTCTTATTCTTT-CTAAAAGGCAAATCTACT i micMur3.chr20 I 68 C 0 s proCoq1.NW_012152729v1 2927694 211 + 9850184 CATTCTAGAT---AATTTGCAAATTTAA----AAGAGGGCCAGAAGACCACAAAAAGAAAAATGTTGCAGAAAAGCCAAAGTAAATTTAAAA-TTTTGCATTTCACATATTCTTAACTCATTATATGCCAAAGCATTCTAGCAATGTCTTGGAAGC-------CAC---------------AAATGAAGCCAAGTTTGAATCTTGTTACTTCTTTTATTCTTT-CTAAAATGCAAATCTACT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80450758 180 + 88915250 CTTTCAAAATCCAAGCTTCCCACTTCCCTAGTATGAAGT-----------------GTAACATGTTATATACATAACAGA---------------T-----------TATTCTTAACTGGTTATATGTCAGAGAATTCTAGTAATGTCTTAGGAGCCAAGTCACAG---------------AAACAAA-CCAAGTTTGATTTATA-TAACTCTTTTATTTTTT-CCAAAAGGAAAATCTT-T i canFam3.chr5 I 2 I 162 s dasNov3.JH569970 911605 231 + 1009443 CCTTCTAAAT---ATTTTACAAATTTAAAAACAAGAGGGTCAGAAGTTAGGAGAAGGAAAAATGTTACATTAAAGTCAAAGTAATAAAAAAAAATCAGCACTTCAAATATTAGTAACTAGTTTTATGTGAAAGCATTCTAGTGATGTCATGGGAGC-------CAGATCATAGATAAATAAAAATGAAACAAAATTTGAGCTCTG-CAACTTTTCTATTCTGTCCAAAGAGGCAAATCTACT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=880095.000000 s hg38.chr16_GL383557v1_alt 31873 59 + 89672 GACACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCACGAGTTTTGTTTTT s panTro5.chr16 21457968 59 - 81586097 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCACGAGTTTTGTTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524704 59 - 90481686 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCACGAGTTTTGTTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757644 59 + 3010529 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCACGAGTTTTGTTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872481 59 + 163208435 GATACCATAATCACTAGCATTTTGTTCATATATAAAATTATTTCATAAGTTTTGTTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343648 59 - 74971481 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCATGAGTTTTGTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21052988 59 - 78541002 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCATGAGTTTTGTTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449219 59 + 26466322 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCATGAGTTTTGTTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773292 59 + 43916225 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCATGAGTTTTGTTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210830 59 + 75399963 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCGTGAGTTTTGTTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758757 59 - 7209941 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCATGAGTTTTGTTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503648 59 + 3907144 GATACCATAATCACTAGCACTTTGTTCATATATAAAATTATTTCATGAGTTTTGTTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21512962 59 - 44557958 AATACCCTAATCACTAGCACTTTGTTCATATATATAAGTATTTCATGAGTTCTGTTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317349 59 + 6628207 GATAGCCTAATCGCTAGCACTTTGTTCATATATAAAAGTATTTCATGAGTTTTGTTTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302274 59 - 5917169 GCTAGCCTAATCGCTAGCACTTTGTTCATATATAAAAGTATTTCATGAGTTTTGTTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263169 59 - 10531588 GATACCCTAATCGCTAGCACTTTGTTCATATATAAAAGTATTTCATGAGTTTTGTTTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918282 59 + 72247402 GACACCTTAATCACTAGTAATTGAGTCATATATAAAATTATTTCATGAGTTTTGTTTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927905 59 + 9850184 GATACCTTAATCACTAGCAATTTAGTCATACATAAAATTATTTTATGAGTTTTGTTTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80451100 59 + 88915250 AACACCATAATCACTGGCACTTTGTTCATATACAAAACTATTTCATGAGTTGTTttttt i canFam3.chr5 I 162 I 173 s dasNov3.JH569970 911836 59 + 1009443 GACTCCACAATCACTGACACTTTTTTAACATACAAAGTTATTTCATGAGTTGCGTATTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=2504179.000000 s hg38.chr16_GL383557v1_alt 31932 179 + 89672 ACACTAAAATCTAACACAAATTTTATTAAGGAATCAGTGCATTTTC---------------------------------CTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAATTGTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATTTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAA s panTro5.chr16 21458027 179 - 81586097 ACACTAAAATCTAACACAAATTTTATTAAGGAATCAGTGCATTTTC---------------------------------CTCAGAAAGACCCTTAAATAAAG--------------------TAACCAAATCAATTGTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATTTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524763 179 - 90481686 ACACTAAAATCTAACACAAATTTTATTAAGGAATCAGTGCATTTTC---------------------------------CTCAGAAAGACCCTTAAATAAAG--------------------TAACCAAATCAATTGTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATTTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757703 179 + 3010529 ACACTAAAATCCAACACAAATTTTATTAAGGAATCAGTGCATTTTC---------------------------------CTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAATTGTATTTCTCCAGGCACAAAATATTAAACATAAATGACCATACCATCATTTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCCAGAAAAAAGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872540 179 + 163208435 ATACTAAAATCAAACACAAATTTTATTAAGGAATCGGTGCATTTTC---------------------------------CTCAGAAGGACACTTAAATAAAG--------------------TAACCAAATCAATTGTATTTCTCCAGGCACAAAATATTAAACATAAGTGACCATACCATCATTTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343707 179 - 74971481 ACACTAAAATCAAACACAAATTTTATTAAGGAATCAGTGTACTTTC---------------------------------CTCAGAAAGATACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATCTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTGATCCAGAAAAAAGAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053047 179 - 78541002 ACACTAAAATCAAACACAAATTTTATTAAGGAATCAGTGTACTTTC---------------------------------CTCAGAAAGATACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATCTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449278 179 + 26466322 ACACTAAAATCAAACACCAATTTTATTAAGGAATCAGTGTACTTTC---------------------------------CTCAGAAAGATACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATCTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773351 179 + 43916225 ACACTAAAATCAAACACAAATTTTATTAAGGAATCAGTGTACTTTC---------------------------------CTCAGAAAGATACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATCTCTCCAAAGGAATTCAAAAGCTCTTTTGTCTAATCTAGAAAAAAGAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58210889 212 + 75399963 ACACTAAAATCAAACACAAATTTTATTAAGGAATCAGTGTACTTTCCTCAGAAAGACACTTAAATAAAGTAACCAATTCCTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATCTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758816 179 - 7209941 ACACTAAAATCAAACACAAATTTTATTAAGGAATCAGTGTACTTTC---------------------------------CTCAGAAAGATACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGATCATACCATCATCTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503707 179 + 3907144 ACACTAAAATCAAACACACATTTTATTAAGGAATCAGTGTACTTTC---------------------------------CTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAATTTTATTTCTCCAGGCACAAAATATTAAACATAACTGACCATACCATCATTTCTCCAAAGGAATTCAAAAGCTCTTTTCTCTAATCTAGAAAAAAGAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513021 175 - 44557958 ACACTAAAATCAAACACAAATTTTATTAAGGAATCCGTGCATTTTC---------------------------------CTCAGAAAGAC----AAGTAAAG--------------------TAACCAAATCAACTGTATTTCTCCAGGCACAAAATATTAAACCTAACTGACCACACCATCATTTCTCCAAAGGAATTCAAAAGCTCCTTTCTCTAATATAGAAAAAAGAT i calJac3.chr20 C 0 I 320 s saiBol1.JH378225 6317408 179 + 6628207 ACACTAAAATCAAACAAAAATTTTATTAAGGAATCAGTGCATTTTC---------------------------------CTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAACTGTATTTCTCCAGGCACAAACTATTAAACCTAACTGACCACACTATCATTTCTCCAAAGGAGTTCAAAAGCTCCTTTCTCTAATATAGAAAAAAGAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302333 179 - 5917169 ACACTAAAATCAAACACAAGTTTTATTAAGGAATCAGTGCATATTC---------------------------------CTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAACTGTATTTCTCCAAGCACAAAATAATAAACCTAACTGACCACACCATCATTTCTCCAAAGGAATTCAAAAGCTCCTTTCTCTAATATAGAAAAAAGAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263228 179 - 10531588 ACACTAAAATCAAATACAAATTTTATTAAGGAATCAGTGCATTTTC---------------------------------CTCAGAAAGACACTTAAATAAAG--------------------TAACCAAATCAACTGTATTTCTCCAGGCACAAAATATTAAACCTAACTGACCACACCATCATTTCTCCAAAGGAATTCAAAAGCTCCTTTCTCTAATATAGAAAAAAGAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918341 179 + 72247402 ATACTGAAATCAAACACAAATTTTATGAAGGAATCAGGGCATTTCC---------------------------------CTCAGAAAGGCACTTAAATAAAG--------------------TAACCAAATCAACTGTATTTCTCCAGGTACAAAATATTAAACTCAAATGAGCACACCAACATTTCTCCAGAGGAATTCAAAAACTCCTTTCTCTAATCTAGAAAAAAAAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2927964 175 + 9850184 ACACTGAAATCAAACACAAATTTTATGAAGGAATCAGGGCATTTCC---------------------------------CTCAGAAAGGCACTTAAATAAAG--------------------TAACCAAATCAATTATATTTCTCCACGTACAAAACATT----TCAACTGAGCACACCATCATTTCTCCAGAGGAATTCAAAAACTCCTTTCTCTAATCTAGAAAAAAGAC i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80451332 193 + 88915250 AAACTTAAATCAAACACAAATTGTCTGCAAGAATCAATGTATTTTC---------------------------------CTTGCAATTGCACTCATATAAAGTAACTAAATAAAAATAAAAATAACCAAATCAACTGTATTTCTCCAGACACAAAACATTAAACACACTAGAACATGCAGTCATTTCTCCAAAG-----CCAAAGCTCCTTTCTGTAATCCAGGGAAAAAC- i canFam3.chr5 I 173 C 0 s dasNov3.JH569970 911895 162 + 1009443 GCACCAAAA----------ATTTTGAAGGGGAAATGGCACATGCTC---------------------------------TTCACAAGAACCCTTAAATAAAG--------------------GAACTAAATCAATTGTATTTCTCTAGACACAAAATAGACAG-------GAACACATCATTCATTTTCCAAAGGAGGCCAAAATTTCCTTTCTCTAACCCAGAAAAAAGAC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=685481.000000 s hg38.chr16_GL383557v1_alt 32111 45 + 89672 CCTTTAAAGGAAGAATATGTTCTCATTCCATGTGACCAGATACAG s panTro5.chr16 21458206 45 - 81586097 CCTTTAAAGGAAGAATATGTTCTCATTCCATGTGACCAGATATAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524942 45 - 90481686 CCTTTAAAGGAAGAATATGTTCTCATTCCATGTGACCAGATATAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757882 45 + 3010529 CCTTTAAAGGAAGAATATGTTCTCATTCCATGTGACCAGATATAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872719 45 + 163208435 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343886 45 - 74971481 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053226 45 - 78541002 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449457 45 + 26466322 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773530 45 + 43916225 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211101 45 + 75399963 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6758995 45 - 7209941 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503886 45 + 3907144 CCTTTAAAGGAAGAATATGCTCTCATTCCATGAGACCAGATATAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513516 42 - 44557958 CCTTTAAAG---GAATATGCTCTCATTCCATGTGACTGGATATAG i calJac3.chr20 I 320 C 0 s saiBol1.JH378225 6317587 44 + 6628207 CCTTTAAAGGAAGAATATGCTCTCA-TCCATGTGACTGGATATAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302512 44 - 5917169 CCTTTAAAGGAAGAATATGCTCTCA-TCCATGTGACTGGATATAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263407 45 - 10531588 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACTGCATATAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918520 45 + 72247402 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2928139 45 + 9850184 CCTTTAAAGGAAGAATATGCTCTCATTCCATGTGACCAGATATAG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80451525 45 + 88915250 CTTTTAAAGGAAGAATATGCTCTTATGCTATGTGACTAGATGTAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912057 42 + 1009443 CTTTAAAAGGAAGAATATGCTGTCTTTCTCTGTGACCAGATA--- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22454267 1348 - 129401213 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=28699.000000 s hg38.chr16_GL383557v1_alt 32156 3 + 89672 TAT s panTro5.chr16 21458251 3 - 81586097 TAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524987 3 - 90481686 TAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757927 3 + 3010529 TAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872764 3 + 163208435 TAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343931 3 - 74971481 TAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053271 3 - 78541002 TAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449502 3 + 26466322 TAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773575 3 + 43916225 TAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211146 3 + 75399963 TAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759040 3 - 7209941 TAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503931 3 + 3907144 TAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513558 3 - 44557958 TGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317631 3 + 6628207 TGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302556 3 - 5917169 TGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263452 3 - 10531588 TGT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918565 3 + 72247402 AGT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2928184 3 + 9850184 AGT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22455615 3 - 129401213 TGT i mm10.chr8 I 1348 C 0 s canFam3.chr5 80451570 3 + 88915250 TGt i canFam3.chr5 C 0 I 235 s dasNov3.JH569970 912099 1 + 1009443 --T i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13683578 1886 + 13852661 I a score=95020.000000 s hg38.chr16_GL383557v1_alt 32159 7 + 89672 ACTGTTT s panTro5.chr16 21458254 7 - 81586097 ACTGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524990 7 - 90481686 ACTGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757930 7 + 3010529 ACTGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872767 7 + 163208435 ACTGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343934 7 - 74971481 ACTGTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053274 7 - 78541002 ACTGTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449505 7 + 26466322 ACTGTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773578 7 + 43916225 ACTGTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211149 7 + 75399963 ACTGTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759043 7 - 7209941 ACTGTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503934 7 + 3907144 TCTGTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513561 7 - 44557958 AATGTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317634 7 + 6628207 AATGTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302559 7 - 5917169 AATGTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263455 7 - 10531588 AATGTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918568 7 + 72247402 AATGTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2928187 7 + 9850184 AATGTTT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22455618 7 - 129401213 ATAGTTT i mm10.chr8 C 0 C 0 s dasNov3.JH569970 912100 7 + 1009443 AATGTTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80451573 235 + 88915250 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=1450884.000000 s hg38.chr16_GL383557v1_alt 32166 103 + 89672 ATAAACTAAAATTTTTCTTCGCAAACCCCAGAGACAGCAGAC--AGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAACAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA s panTro5.chr16 21458261 103 - 81586097 ATAAACTACAATTTTTCTTCGCAAACCCCAGAGACAGCAGAC--AGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAACAGTATGA----------------------------------------------------GGGTAACACACTCCAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21524997 103 - 90481686 ATAAACTACAATTTTTCTTCACAAACCCCAGAGACAGCAGAC--AGTTACATGGCTTAAGTGGTTTACAACAAAGCTGAACAGTATGA----------------------------------------------------GGGTAACACACTCCAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 757937 103 + 3010529 ATAAACTAAAATTTTTCTTCGCAAACCCCAGAGACAGCAGAC--AGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAACAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872774 105 + 163208435 ATAAACTAAAATTTTTCATCTCAAACCCCAGAGACAGCAGACAGAGTTGCATGGCTTAAGTGCTTTACAACAAAGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21343941 105 - 74971481 ATAAACTAAAAGGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAGGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053281 105 - 78541002 ATAAACTAAAAGGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAGGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449512 105 + 26466322 ATAAACTAAAATGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAGGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773585 105 + 43916225 ATAAACTAAAATGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211156 105 + 75399963 ATAAACTAAAATGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759050 105 - 7209941 ATAAACTAAAATGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 503941 105 + 3907144 ATAAGCTAAAATGTTTCTTCTCAAACCCCAGAGACAGCAGACAGAGTTACATGGCTTAAGTGCTTTACAACAAAGCTGAATAGTATGA----------------------------------------------------GGGTAACACTCTCCAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513568 102 - 44557958 AT-AACTAAAATTTTTCTTCTTAAATCCCAGAGACAGCAAACAGAGTTATATGAC--AAGTGCTTTACAACAAAGTTGAATAGTATGA----------------------------------------------------GAGTAACACTCTCCAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317641 105 + 6628207 ATAAACTAAAATTTTTCTTCTCAAATCCCAGAGACATCAAACAGAGTTACATGACTTAAGTGCTTTACAACAAAGTTGAATAGTATGA----------------------------------------------------GAGTAACACTCTCAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302566 103 - 5917169 ATAAATTAAAATTTTTCTTCTCAAATCCC--AGACAGCAAACAGAGTTACATGACTTAGGTGCTTTACAACAAAGTTGAACAGTATGA----------------------------------------------------GAGTAACACTCTCCAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263462 102 - 10531588 ATAAACTAAAA---TTCTTCTCAAATCCCAGAGACAGCAAACAGAGTTACATGACTTAAGTGCTTTACAGCAAAGTTGAATAGTATGA----------------------------------------------------GAGTAACACTCTCCAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918575 105 + 72247402 ATAAACTAAAATTTTTCTTTTCAAACCCCACAGACAGCAGACAGAGTTACATTGCACAAGTGCTTTACAACAAAGCTGAATGCTATGA----------------------------------------------------GGGTAATACCCTCCAAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2928194 105 + 9850184 ATAAACTAAAATTTTTCTTTTCAAATCCCACAGACAGCAGACGGAGTTACATCGCCTAAGTGCTTTACAACAAAGCTAAATGCTATGA----------------------------------------------------GGGTAATACTCTCCAAA i proCoq1.NW_012152729v1 C 0 I 199 s mm10.chr8 22455625 101 - 129401213 GTGAACCAAAACCTTCCTTCTCAAATGCCATACACAGTAGAC----TTTGACTGACTGACTGCTTTATGACAAGGCTGAGCTGTATGA----------------------------------------------------CTGCCATACCCGCCATG i mm10.chr8 C 0 C 0 s canFam3.chr5 80451808 101 + 88915250 ataaactaaaatttttCTTCTCAGTCCCCAGAGCTAGCAG----AGTTGTATCACCCAAGTGCTTTATAACAAAGCTGAATAGTATAA----------------------------------------------------GCTTAATTTCCTCCCAA i canFam3.chr5 I 235 C 0 s dasNov3.JH569970 912107 152 + 1009443 ATAAACTAAAAATTTTCT---CAATCCTCACAGCCAGCAGAA--AGTTACACTGTATTAGTGCTTTATAACAAAGCTTAATGGTTTAATTCTTTCTCAATTCCTATTTTTTTCACTTAAAATCATTCTTCTACTGTCCTTGGAGAGAAATCTCAGGG i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13683578 1886 + 13852661 I a score=126904.000000 s hg38.chr16_GL383557v1_alt 32269 13 + 89672 --------TTATTTCACTTTT-------------------------------------------------- s panTro5.chr16 21458364 13 - 81586097 --------TTATTTCACTTTT-------------------------------------------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525100 13 - 90481686 --------TTATTTCACTTTT-------------------------------------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758040 13 + 3010529 --------TTATTTCACTTTT-------------------------------------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872879 13 + 163208435 --------TTATTCCACTTTT-------------------------------------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344046 13 - 74971481 --------TTATTCCACTTTT-------------------------------------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053386 13 - 78541002 --------TTATTCCACTTTT-------------------------------------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449617 13 + 26466322 --------TTATTCCACTTTT-------------------------------------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773690 13 + 43916225 --------TTATTCCACTTTT-------------------------------------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211261 13 + 75399963 --------TTATTCCACTTTT-------------------------------------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759155 13 - 7209941 --------TTATTCCACTTTT-------------------------------------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504046 13 + 3907144 --------TTATTCCACTTTT-------------------------------------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513670 13 - 44557958 --------TTATTCCCCTTTT-------------------------------------------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317746 13 + 6628207 --------TTATTCCCCTTTT-------------------------------------------------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302669 13 - 5917169 --------TTATTCCCCTTTT-------------------------------------------------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263564 13 - 10531588 --------TTATTCCCCTTTT-------------------------------------------------- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918680 13 + 72247402 --------GTATTCCATTTTT-------------------------------------------------- i micMur3.chr20 C 0 I 187 s mm10.chr8 22455726 13 - 129401213 --------CTATCCCTTTTCT-------------------------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80451909 13 + 88915250 --------GTATTGCACATTT-------------------------------------------------- i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 912259 71 + 1009443 CTAATTCACTATATCCCTTTCTATCACCATACCCTGTCATTTCTTCCTTTAAAATAGTGGCTCTCAGTTTT i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2928299 199 + 9850184 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=69588.000000 s hg38.chr16_GL383557v1_alt 32282 5 + 89672 CCACT-- s panTro5.chr16 21458377 5 - 81586097 CCACT-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525113 5 - 90481686 CCACT-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758053 5 + 3010529 CCACT-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872892 5 + 163208435 CCACT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344059 5 - 74971481 CCACT-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053399 5 - 78541002 CCACT-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449630 5 + 26466322 CCACT-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773703 5 + 43916225 CCACT-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211274 5 + 75399963 CCACT-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759168 5 - 7209941 CCACT-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504059 5 + 3907144 CCACT-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513683 5 - 44557958 CCACT-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317759 5 + 6628207 CCACT-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302682 5 - 5917169 CCACT-- i cebCap1.NW_016107433v1 C 0 I 154 s aotNan1.NW_018500622v1 9263577 5 - 10531588 CCACT-- i aotNan1.NW_018500622v1 C 0 I 156 s mm10.chr8 22455739 5 - 129401213 TCACT-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80451924 5 + 88915250 CCACT-- i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 912330 7 + 1009443 CCACCCT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54918693 187 + 72247402 I e proCoq1.NW_012152729v1 2928299 199 + 9850184 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=8071.000000 s hg38.chr16_GL383557v1_alt 32287 1 + 89672 G s panTro5.chr16 21458382 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525118 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758058 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53872897 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344064 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053404 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449635 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773708 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211279 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759173 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504064 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513688 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317764 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s mm10.chr8 22455744 1 - 129401213 G i mm10.chr8 C 0 I 348 s canFam3.chr5 80451929 1 + 88915250 G i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912337 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54918693 187 + 72247402 I e proCoq1.NW_012152729v1 2928299 199 + 9850184 I e aotNan1.NW_018500622v1 9263582 156 - 10531588 I e cebCap1.NW_016107433v1 3302687 154 - 5917169 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=17109.000000 s hg38.chr16_GL383557v1_alt 32288 2 + 89672 AT s panTro5.chr16 21458383 2 - 81586097 AT i panTro5.chr16 C 0 I 154 s panPan2.chr16 21525119 2 - 90481686 AT i panPan2.chr16 C 0 I 154 s gorGor5.CYUI01000018v1 758059 2 + 3010529 AT i gorGor5.CYUI01000018v1 C 0 I 154 s nomLeu3.chr2 53872898 2 + 163208435 AT i nomLeu3.chr2 C 0 I 155 s rheMac8.chr20 21344065 2 - 74971481 AT i rheMac8.chr20 C 0 I 154 s macFas5.chr20 21053405 2 - 78541002 AT i macFas5.chr20 C 0 I 154 s macNem1.NW_012011355v1 14449636 2 + 26466322 AT i macNem1.NW_012011355v1 C 0 I 154 s cerAty1.NW_011999143v1 20773709 2 + 43916225 AT i cerAty1.NW_011999143v1 C 0 I 155 s chlSab2.chr5 58211280 2 + 75399963 AT i chlSab2.chr5 C 0 I 153 s manLeu1.NW_012101698v1 6759174 2 - 7209941 AT i manLeu1.NW_012101698v1 C 0 I 155 s colAng1.NW_012123265v1 504065 2 + 3907144 AT i colAng1.NW_012123265v1 C 0 I 153 s calJac3.chr20 21513689 2 - 44557958 GT i calJac3.chr20 C 0 I 153 s saiBol1.JH378225 6317765 2 + 6628207 GT i saiBol1.JH378225 C 0 I 153 s canFam3.chr5 80451930 2 + 88915250 GT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912338 2 + 1009443 AT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54918693 187 + 72247402 I e mm10.chr8 22455745 348 - 129401213 I e proCoq1.NW_012152729v1 2928299 199 + 9850184 I e aotNan1.NW_018500622v1 9263582 156 - 10531588 I e cebCap1.NW_016107433v1 3302687 154 - 5917169 I e otoGar3.GL873566 13683578 1886 + 13852661 I a score=15561.000000 s hg38.chr16_GL383557v1_alt 32290 1 + 89672 A s panTro5.chr16 21458539 1 - 81586097 A i panTro5.chr16 I 154 C 0 s panPan2.chr16 21525275 1 - 90481686 A i panPan2.chr16 I 154 C 0 s gorGor5.CYUI01000018v1 758215 1 + 3010529 A i gorGor5.CYUI01000018v1 I 154 C 0 s nomLeu3.chr2 53873055 1 + 163208435 A i nomLeu3.chr2 I 155 C 0 s rheMac8.chr20 21344221 1 - 74971481 A i rheMac8.chr20 I 154 C 0 s macFas5.chr20 21053561 1 - 78541002 A i macFas5.chr20 I 154 C 0 s macNem1.NW_012011355v1 14449792 1 + 26466322 A i macNem1.NW_012011355v1 I 154 C 0 s cerAty1.NW_011999143v1 20773866 1 + 43916225 A i cerAty1.NW_011999143v1 I 155 C 0 s chlSab2.chr5 58211435 1 + 75399963 A i chlSab2.chr5 I 153 C 0 s manLeu1.NW_012101698v1 6759331 1 - 7209941 A i manLeu1.NW_012101698v1 I 155 C 0 s colAng1.NW_012123265v1 504220 1 + 3907144 A i colAng1.NW_012123265v1 I 153 C 0 s calJac3.chr20 21513844 1 - 44557958 A i calJac3.chr20 I 153 C 0 s saiBol1.JH378225 6317920 1 + 6628207 A i saiBol1.JH378225 I 153 C 0 s cebCap1.NW_016107433v1 3302841 1 - 5917169 A i cebCap1.NW_016107433v1 I 154 C 0 s aotNan1.NW_018500622v1 9263738 1 - 10531588 A i aotNan1.NW_018500622v1 I 156 C 0 s otoGar3.GL873566 13685464 1 + 13852661 A i otoGar3.GL873566 I 1886 C 0 s canFam3.chr5 80451932 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912340 1 + 1009443 A i dasNov3.JH569970 C 0 I 13 e micMur3.chr20 54918693 187 + 72247402 I e mm10.chr8 22455745 348 - 129401213 I e proCoq1.NW_012152729v1 2928299 199 + 9850184 I a score=14972.000000 s hg38.chr16_GL383557v1_alt 32291 1 + 89672 A s panTro5.chr16 21458540 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525276 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758216 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873056 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344222 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053562 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449793 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773867 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211436 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759332 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504221 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513845 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317921 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302842 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263739 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13685465 1 + 13852661 G i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22456093 1 - 129401213 A i mm10.chr8 I 348 C 0 s canFam3.chr5 80451933 1 + 88915250 A i canFam3.chr5 C 0 I 166 s dasNov3.JH569970 912354 1 + 1009443 A i dasNov3.JH569970 I 13 C 0 e micMur3.chr20 54918693 187 + 72247402 I e proCoq1.NW_012152729v1 2928299 199 + 9850184 I a score=241088.000000 s hg38.chr16_GL383557v1_alt 32292 23 + 89672 ----------------------ACTCACTG-CA-GAAGATTCTCTGT s panTro5.chr16 21458541 23 - 81586097 ----------------------ACTCACTG-CA-TAAGATTCTCTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525277 23 - 90481686 ----------------------ACTCACTG-CA-TAAGATTCTCTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758217 23 + 3010529 ----------------------ACTCACTG-CA-GAAGATTCTCTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873057 23 + 163208435 ----------------------ACTCACTG-CA-GGAGATTCTCTGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344223 23 - 74971481 ----------------------ACTCACTG-CA-GAATATTCTCTGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053563 23 - 78541002 ----------------------ACTCACTG-CA-GAATATTCTCTGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449794 23 + 26466322 ----------------------ACTCACTG-CA-GAATATTCTCTGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773868 23 + 43916225 ----------------------ACTCACTG-CA-GGAGATTCTCTGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211437 23 + 75399963 ----------------------ACTCACTG-CA-GGAGATTCTCTGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759333 23 - 7209941 ----------------------ACTCACTG-CA-GGAGATTCTCTGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504222 23 + 3907144 ----------------------ACTCACTG-CA-GCAGATTCTCTGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513846 23 - 44557958 ----------------------ACTCACTG-CA-AAACATTCTCTGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6317922 23 + 6628207 ----------------------ACTCACTG-CA-AAAAGATCTCTGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302843 23 - 5917169 ----------------------ACTCACTG-CA-AAAGATTCTCTGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263740 23 - 10531588 ----------------------ACTCACTG-CA-AAAGATTCTCTGG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13685466 23 + 13852661 ----------------------GCCCACTG-GA-AGAGATTCTTCAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22456094 20 - 129401213 ----------------------ACATACTG-CA-GAAG---TGCTGT i mm10.chr8 C 0 I 3 s canFam3.chr5 80452100 24 + 88915250 ----------------------GCTCACTGCCC-AGAGGTTCTTTAC i canFam3.chr5 I 166 C 0 s dasNov3.JH569970 912355 46 + 1009443 AATTACTATGCTAGTAACAGAGGCTCATGC-CACAGAGATTCTCCAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54918693 187 + 72247402 I e proCoq1.NW_012152729v1 2928299 199 + 9850184 I a score=6308291.000000 s hg38.chr16_GL383557v1_alt 32315 423 + 89672 AAGTATCAAATTTTTGGATGCACAGGCAGTTGGAAGGAGACTATCTAGGTAGGAAAAACT--TCTCAGTGGACTCTGCT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tctcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccaccaccggctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccaccttcggtctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCACATCACTTCCTGGATCAAAAATGAATTGCATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTGGTTGGGCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT s panTro5.chr16 21458564 423 - 81586097 AAGTATCAAATTTTTGGATGCACAGGCAGTTGGAAGGAGACTATCTAGGTAGGAAAAACT--TCTCAGTGGACTCTGCT----ATGTCCCCTGACAAGCATCAACTGctttgaagta-tctcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccaccaccggctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccaccttcggtctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCACATCACTTCCTGGATCAAAAATGAATTGCATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTGGTTGGGCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525300 423 - 90481686 AAGTATCAAATTTTTGGATGCACAGGCAGTTGGAAGGAGACTATCTAGGTAGGAAAAACT--TCTCAGTGGACTCTGCT----ATGTCCCCTGACAAGCATCAACTGctttgaagta-tctcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccaccaccggctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccaccttcggtctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGTCAACCCAAAATTCTGTTCCCATCACATCACTTCCTGGATCAAAAATGAATTGCATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTGGTTGGGCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758240 421 + 3010529 AAGTATCAAATTTTTGGATGCACGGGCAGTTGGAAGGAGACTATCTAGGTAGGAAAAACT--TCTCAGTGGACTCTGCT----ATGTGCCCTGACAAGCGTCAACTGctttaaagta-tctcttgaa-tgaatcctcctctccatt-ccactgcc-acta------------------------------------ccaccaccggctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccacctttggtctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCACATCACTTCCTGGATCAAAAATGAATTGCATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTGGTTGGGCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873080 423 + 163208435 AAGTATCAAATTTTTGGATGCACGGGCAGTTGGAAGAAGACTATCTAGGTAGGAAAAACT--TCTCAGTGGACTCTACT----ATGTCCCCTGATAAGCATCAACTGGtttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccaccaccagctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccacctttggtctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCACATCACTTCCTGGATCAAAAATGAATTGCATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTGGCTGGCCTTTTCT-CTTGCTATGCAAATCTGTACCAATTGTTTTCCCATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344246 423 - 74971481 AAGTATCAAATTTTTGGGTGCACGGGCAGTTGGAAGGAGACTATCTAGGTAAGAAAAACT--TCTTAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACCGctttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccacaaccagctc-----------caaagatgat--------------------cacctct----ggcttggattatttttc--actacaacagctgctgtttttcccacctttggcctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATATCACTTCCTGGATCAAAAATGAATTGCATCAATTTCCCACCTCTTCTATCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21053586 423 - 78541002 AAGTATCAAATTTTTGGGTGCACGGGCAGTTGGAAGGAGACTATCTAGGTAAGAAAAACT--TCTTAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccacaaccagctc-----------caaagatgat--------------------cacctct----ggcttggattatttttc--actacaacagctgctgtttttcccacctttggcctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATATCACTTCCTGGATCAAAAATGAATTGCATCAATTTCCCACCTCTTCTCTCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14449817 423 + 26466322 AAGTATCAAATTTTTGGGTGCACGGGCAGTTGGAAGGAGACTATCTAGGTAAGAAAAACT--TCTTAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccacaaccagctc-----------caaagatgat--------------------cacctct----ggcttggattatttttc--actacaacagctgctgtttttcccacctttggcctttcctctttgcactgcatccagtgcttccactgctgccaacccaaaattctgttcccatcatatcacttcctggatcaaaaatgaattgcatcaatttcccacctcTTCTATCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20773891 417 + 43916225 AAGTATCAAATTTTTGGGT------GCAGTTGGAAGGAGACTATCTAGGTAAGAAAAACT--TCTTAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccacaaccagctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccacctttggcctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATATCACTTCCTGGATCAAAAATGAATTGCATCTATTTCCCACCTCTTCTATCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211460 421 + 75399963 AAGTATCAAATTTTTGGGTGCATGGGCAGTTGCAAGGAGACTATCTAGGTAAGAAAAACT--TCTCAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccaccaccagctc-----------caaaggtgat--------------------cacctct----ggcttggattactTTTC--ACTACAACAGCTGCTGTTTTTCCCACCTTTGGTCTTTCCTCTTTGCACCGCATCCA--GCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATATCACTTCCTGGATCAAAAATGAATTGCATCAATTTCCCACCTCTTCTATCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759356 423 - 7209941 AAGTATCAAATTTTTGGGTGCACAGGCAGTTGGAAGGAGACTATCTAGGTAAGAAAAACT--TCTTAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tttcttgaattgaatcctcctctctattcccactgcc-acta------------------------------------ccacaaccagctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccacctttggcctttcctctttgcactgcatccagtgcttccactgctgccaacccaaaattctgttcccatcatatcacttcctggatcaaaaatgaattgcatcaatttcccacctcTTCTATCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCGATTATTTTCCCATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504245 423 + 3907144 AAGTATCAAATTTTTGGGTGCACGGGCAGTTGGAAGGAGACTATCTAGGCAAGAAAAACT--TCTCAGTGGACTCTACT----ATGTCCCCTGACAAGCATCAACTGctttaaagta-tttcttgaattgaatcctcctctctattcccattgct-acta------------------------------------ccaccaccggctc-----------caaaggtgat--------------------cacctct----ggcttggattacttttc--actacaacagctgctgtttttcccacctttggtctttcctctttgcaCTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATATCACTTCCTGGATCAAAAATGAATTGCATCAATTTCCCACCTCTTCTATCTCTTCAACCTTT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATCTGTCCCAATTATTTTCCCATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21513869 406 - 44557958 AAACACCAAATTTTTGGGCACACGGGCAGTTGGAAGGAGA-------------GGAAACT--TCTCAGTGGACTCT-------ATGTCCCCTGACAAGCATCAACTGCTTTAAAGCA-TTTCTTGAATTGAATCCTCTGCTCTATTCCCACGGCC-ACTA-------------------------------------CACTATCTGTTC-----------CAAAGGTGAT--------------------CACCTCT----GCCTTGGATTACTTTTC--ACTACAACAGCTGCAGTTTTTCCCACCTTTGGTCTTTCCTCTTTGCATTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCACATCACTTCCTGGATCAAAAATGAATTACATCAGTTTCTCACCTCTTCTATTTCTTCAACCTCT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAATATGCCCCAATTATTTTCCAATAA i calJac3.chr20 C 0 I 7 s saiBol1.JH378225 6317945 413 + 6628207 AAATACCAAATTTTTGGGTGTATGGGCAATTGGAAGGAGA-------------GGAAACTTCTCTCAGTGGACTCTGAAATGAATGTCCTCTGACAAGAATCAACTGctttaaagca-tttcttgaattgaatcctctgctccattcccacggcc-acta-------------------------------------cacaacccgttc-----------caaaggtgat--------------------cacctct----ggcttggattactTTTC--ACTACAACAGCTGCAGTTTTTCCCACCTTCGGTTTTTCCTC--TGCATTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTCTTCCTATCACATCACTTCCTGGATCAAAAATGAATTACATCAGTTTCTCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTAGTTGTCCTTTTCT-CTTGCTATACAAATATGTCCCAATTATTTTCCGATTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3302866 413 - 5917169 AAATACCAAATTTTTGGGCGCACAGGCAGTTGGAAGGAGA-------------GGAAACT--TCTCAGTGGACTCTGAAATGAATGTCCCCTGACAAGAATCAACTGCTTTAAAGCA-TTTCTTGAATTGAATCCTCTGCTCTATTCCCACGGCC-ACTA-------------------------------------CACCACCCGTTC-----------CAAAGGTGAT--------------------CACCTCT----GGCTTGGATTACTTTTC--ACTACAACAGCTGCAGTTTTTCCCACCTTTGGTCTTTCCTCTTTGCATTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCTATCACATCACTTCCTGGATCAAAAATGAATTACATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-CACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACACATATGTCCTGATTATTTCCCGATTt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9263763 406 - 10531588 AAATACCAAATTTTTGGGTGCAAGGGCAGTTGGAAGGAGA-------------GGAAACT--TCTCAGTGGACTCT-------ATGTCCCCTGACAAGCATCAGCTGCTTTAAAGCA-CTTCTTGAATTGAATCCTCTGCTCTATTCCCACGGCC-ACTA-------------------------------------TACCACCGGTTC-----------CAAAGGTGAT--------------------CACCTCT----GGCTTGGATTACTTTTC--ACTACAACAGCTGCAGTTTTTCCCACCTTTGGTCTTTCCTCTTTGCATTGCATCCAGTGCTTCCACTGCTGCCAACCCAAAATTCTGTTCCCATCACATCACTTTCTGGATCAAAAATGAATTACATCAGTTTCCCACCTCTTCTATCTCTTCAACCTCT-TACTCTTTCTGTTGGTTGGCCTTTTCT-CTTGCTATACAAACATGTCCCAATTATTTTCCGATTt i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54918880 417 + 72247402 AAGTATCGAATCTCTGAGTGCATAGGCAACTGGAAGGAGACTGTCCAGGTAGGAAAAGGT--CCCCAGTGGATTCTGCA----ACGT--CCCAGCAAGAATCAGCTGCTTTAAAGTGTTTTCTTGAATTGAATCTTCTTCTCTCTTCCCACAGCC-ATCA------------------------------------CCACAACCCCCTC-----------CAAAGGTTAT--------------------CACCTCT----GGTTTGGATTACTTTTC--ACTACAACAGCTGTCGTTTTTCCTACCTTTAGTCTTTCCTCTTTGCACTGCATCCAGTGCATCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATGTCACTTCCTGGCTCAGAAATGGATTGCATCAGTTCCCCACCCCTTCTTTCTCTTCAACCTCT-CCCCTTCTCTGTTGG----CCTTTTCT-CTTGCTGTACAAATATGTCCCAATTCTTTCCCATTG- i micMur3.chr20 I 187 C 0 s proCoq1.NW_012152729v1 2928498 404 + 9850184 AAGTATCAAATCTTTGGGTGCACAGGCAGCTGGAAGGAGACTGTCCAGGTAGGAAAAGGT--CCCCAGTGGATTCTGCG----ATGT-CCCCAGCAAGAATCAGCTGGTTTAAAGTG-TTTCCTGAATTGAA---TCTTCTCTATTCCCATTGCC-ATCA------------------------------------CCACAA-TCCCTT-----------CGAAGGTTAC--------------------CACCTCT----CCTTTGGATTACTTTTC--ACTACAACAGCTGTCGTTTTTCCTACCTTTGGTCTTTCCTCTTTGCAC---------TGCATCCACTGCTGCCAACCCAAAATTCTGTTCCCATCATGTCACTTCCTGGCTCAGAAACGGATTGCATCAGTTCCCCACCCCTTCTTTCTCTTCAACCTCT-CCCCTTCTCTGTTGG----CCTTTTCT-CTTGCTGTACAAATATGTCCCAATTCTTTCCCATGG- i proCoq1.NW_012152729v1 I 199 C 0 s otoGar3.GL873566 13685489 483 + 13852661 CAATATCAAATCTTTGGGTGCACAGGTGGTTGGAAGGAGACTGTCCAGCT-GGAAAAGGT--CCCCAGTGGATTCTGCT----ATGCCCCCTAGCAGAAACTGTCTGATTTAAAGAG-GATCTTGAATTGAC---TCTTC-CTTTCACCACAGCC-ACAACTCCCTCtaaagcagtggttctcaaccttcctaatgccacaa-ctctttaatacagttcatgagggtcatgacccacagcttgagaactgcagctctaAAGGGTTTGGATCACTTTTC--ACTGTAGCAGCTGTAG-TTTTCCTACCTTTGGTCTTTCCTCTCTGCATTGCATCCAGTGCATCCACTATTGCCAGCCCAAAATTCTGTTCCCATCAGGTCACTTCCTGGCTCAGAAACGGATTGCATCAGTTCTCCTCCCCTTCTTTCTCTTCATCCTCTCCCCCCTCTCTGTTGG----CCTTTTCT-CTTGCTGTACAGATATGTCCTAATTCTTTCCCAATG- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22456117 303 - 129401213 CAGTGTCGTGTCTGTAG-------GACAGTTGGGAAGAGGCTATCTAGGCAAGAGAAGGT--CCCTAGTGTGTTCTGCT----ATGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCT----GGTTTGGATTATTTTT---ACTGCAGCAGCTGTAGTTTCTCCTACCTCTGGGCCTTCCTCTCT-CACAGCATCCAGTGCGTCCACTGCTGCCAACCT-AAATTCTGTTCCTATCATGTCACTTCCTGGCTCAAAAACAAACTGCA--------CCACCCCTTCCATCTCTGCAACCTCT-C-CTCACTCTGCTGT----TCTTTGCT-TTTTGAGAACAAATATGCCGCAAATCTTCCCTACTT- i mm10.chr8 I 3 C 0 s canFam3.chr5 80452124 415 + 88915250 AAGTGTTGAATCTTCGGGTGCTCAAGCAGTCAGAAGGAGGCTATCAAGGTTGAAAAAGGT--CCTCAGTGGATTCTGCT------GACTCCTGGCAAAAATCACCTGCTTTACTATG-TTTTTTGAATGGCGTCTTCTGTTCTACTCCCAGTGCT-ACCA------------------------------------CCAACGCCACCTT-----------CAATGTTTAT--------------------CACCTCT-----GTATGGGCTGC-TTTC--ATTACAACAGCTGTAGTTTTTTCTACCTTTGGTCTTTCCTCTTCACATTGTATCCAGTGCATCCACTGCTGCCAATCCAAGATTCTGTTCCCATCATGTCACTTCCTGGCTCAAAAACAGATTGCATCAGTTCCCCACCCCTTCTATCTCTTCAACCTCT-TCCCTTGTCTGTTGG----CCTTTTCTCCTTGCTTTACAAATATGCCCCAATTCTTCCTCTCTT- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912401 416 + 1009443 AAGTATCAAATCTTTGCGTACAGGGGCAGTCAGAAGGATGATGCCTAGATAGAAAAATGT--CCCTAGAAGTTACTACT----GTGTTAC------AGAAATAGCTGCTTTGGAGTA-TTTCTT-AACTGAGTCTTCATCTCTATTTCTACTGCCAACTT------------------------------------ACCCCACCCCCAA-----------TGAAGGCCCT----------------TTTACACCTCT----GGTTTAGATTACTTTTTAGATTACAACAGCTGTGGTTTTTCCCACCTTTGGTCTTTCCTCTTTGCATTGCACGCAGAGCATTCACTGCTGCCAACCCAAAATTCTGTTCTCATCATGTCACTTCCTGGCTCAACTACGGATTGCATCAGTTTTTT-CCTCTCTTGTCTCTTCAACCTCT-CCCCATTT------GTTGGCCCTATCTCCTTCCTATACAAATAGGCTCCCATTATTCCCCATTC- i dasNov3.JH569970 C 0 C 0 a score=104901.000000 s hg38.chr16_GL383557v1_alt 32738 6 + 89672 AAAACA s panTro5.chr16 21458987 6 - 81586097 AAAACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525723 6 - 90481686 AAAACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758661 6 + 3010529 AAAACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873503 6 + 163208435 AAAACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344669 6 - 74971481 AAAACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054009 6 - 78541002 AAAACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14450240 6 + 26466322 AAAACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774308 6 + 43916225 AAAACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211881 6 + 75399963 AAAACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759779 6 - 7209941 AAAACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504668 6 + 3907144 AAAACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21514282 6 - 44557958 AAAGTA i calJac3.chr20 I 7 C 0 s cebCap1.NW_016107433v1 3303279 6 - 5917169 aaaaca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9264169 6 - 10531588 aaaaca i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54919297 6 + 72247402 AAAACA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2928902 6 + 9850184 aaaaca i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13685972 6 + 13852661 AAAACA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22456420 6 - 129401213 AATACA i mm10.chr8 C 0 I 2541 s canFam3.chr5 80452539 6 + 88915250 AAGACA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912817 6 + 1009443 AAAACA i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6318358 0 + 6628207 C a score=83435.000000 s hg38.chr16_GL383557v1_alt 32744 5 + 89672 AAACA s panTro5.chr16 21458993 5 - 81586097 AAACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525729 5 - 90481686 AAACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758667 5 + 3010529 AAACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873509 5 + 163208435 AAACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344675 5 - 74971481 AAACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054015 5 - 78541002 AAACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14450246 5 + 26466322 AAACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774314 5 + 43916225 AAACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211887 5 + 75399963 AAACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759785 5 - 7209941 AAACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504674 5 + 3907144 AAACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21514288 5 - 44557958 AAACA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3303285 5 - 5917169 aaaca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9264175 5 - 10531588 aaaca i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54919303 5 + 72247402 AAACA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2928908 5 + 9850184 aaaca i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13685978 5 + 13852661 AAACA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80452545 5 + 88915250 AAATA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912823 5 + 1009443 AAATA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e saiBol1.JH378225 6318358 0 + 6628207 C a score=12376.000000 s hg38.chr16_GL383557v1_alt 32749 1 + 89672 A s panTro5.chr16 21458998 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525734 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758672 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873514 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344680 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054020 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14450251 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774319 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211892 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759790 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504679 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3303290 1 - 5917169 a i cebCap1.NW_016107433v1 C 0 I 890 s micMur3.chr20 54919308 1 + 72247402 A i micMur3.chr20 C 0 I 632 s proCoq1.NW_012152729v1 2928913 1 + 9850184 a i proCoq1.NW_012152729v1 C 0 I 633 s otoGar3.GL873566 13685983 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80452550 1 + 88915250 A i canFam3.chr5 C 0 I 17 e mm10.chr8 22456426 2541 - 129401213 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e saiBol1.JH378225 6318358 0 + 6628207 C e calJac3.chr20 21514293 0 - 44557958 C a score=667411.000000 s hg38.chr16_GL383557v1_alt 32750 118 + 89672 ggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcagatcacgaggtcaggagattgagactatcctggctaacacagtgaaacc------ccatctctact s panTro5.chr16 21458999 118 - 81586097 ggccaggtgcggtggctcatgcctgtaatcccagcactttgggaagctgaggcaggcagatcacgaggtcaggagatcgagactatcctggctaacacagtgaaacc------ccatctctact i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525735 118 - 90481686 ggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcagatcacgaggtcaggagatcgagactatcctggctaacacagtgaaacc------ccatctctact i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758673 118 + 3010529 ggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcagatcacgagttcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873515 118 + 163208435 ggccgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggatcacgaggtcaggagattgagactatcctggctaacgcagtgaaacc------ccatctctact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344681 118 - 74971481 ggccgggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcacgacgtcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054021 118 - 78541002 ggccgggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcacgacgtcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14450252 118 + 26466322 ggccgggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcacgacgtcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774320 118 + 43916225 ggccgggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcacgacgtcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58211893 118 + 75399963 ggccgggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcacgacgtcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759791 118 - 7209941 ggccgggtgtggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggcggatcacgacgtcaggagatcgagaccatcctggctaacacagtgaaacc------ccatctctact i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504680 118 + 3907144 ggccgggtgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacgatgtcaggagatcaagaccatcctggctaatacagtgaaact------ccatctctact i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13685984 67 + 13852661 -----------------------------------------------------AAACAAACCACCACAAAAGTAAAAC----CTTTCTTGGGCACTTCAATCAACTCCAGGTACCACCTCTGCT i otoGar3.GL873566 C 0 I 238 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e saiBol1.JH378225 6318358 0 + 6628207 C e calJac3.chr20 21514293 0 - 44557958 C a score=809664.000000 s hg38.chr16_GL383557v1_alt 32868 144 + 89672 aaaaaatacaaaaaattggccgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcagcagaatggcgtgaacccggtaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggca s panTro5.chr16 21459117 144 - 81586097 aaaaaatacaaaaaattggccgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcagcagaatggcgtgaacccagtaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525853 144 - 90481686 aaaaaatacaaaaaattggccgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcagcagaatggcgtgaacccggtaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758791 144 + 3010529 aaaaaatacaaaaaattggccaggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcagcagaatggcgtgaacccggaaggcagagcttgcagtgagctgagatcacaccactgcactcaagactgggca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873633 144 + 163208435 aaaaaatacaaaaaatcggccaggcatggtagtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacccgggaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344799 144 - 74971481 aaaaaatacaaaaacttagccgggcgtggtggcgggtgcctgtagtgccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggaacttgcagtgagcccagatcacaccactgcactccagcctgggca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054139 144 - 78541002 aaaaaatacaaaaacttagccgggcgtggtggcgggtgcctgtagtgccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggaacttgcagtgagcccagatcacaccactgcactccagcctgggca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14450370 144 + 26466322 aaaaaatacaaaaacttagctgggcgtggtggcgggtgcctgtagtgccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggaacttgcagtgagcccagatcacaccactgcactccagcctgggca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774438 144 + 43916225 aaaaaatacaaaaacttagctgggcgtggtggcgggtgcctgtagtgccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggaacttgcagtgagcccagatcacaccactgcactccagcctgggca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58212011 144 + 75399963 aaaaaatacaaaaacttagctgggagtggtggcgggtgcctgtagtgccagctactcaggaggctgaggcaggagaatggcatgaacctgggaggtggaacttgcagtgagcccagattacaccactgcactccagcctgggca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6759909 144 - 7209941 aaaaaatacaaaaacttagcggggcgtggtggcgggtgcctgtagtgccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggaacttgcagtgagcccagatcacaccactgcactccagcctgggca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 504798 144 + 3907144 aaaaaatacaaaaacttagccaggcgtggtggcgggtgcctgtagtgccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcagaacttgcagtgagcccagatcacaccactgtactccagcctgggca i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e saiBol1.JH378225 6318358 0 + 6628207 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=55605.000000 s hg38.chr16_GL383557v1_alt 33012 14 + 89672 acagagtgagactc s panTro5.chr16 21459261 14 - 81586097 acagagtgagactc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21525997 14 - 90481686 acagagtgagactc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758935 14 + 3010529 acagagtgagactc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873777 14 + 163208435 acagagtgagactc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344943 14 - 74971481 acagagcgagactc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054283 14 - 78541002 acagagcgagactc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14450514 14 + 26466322 acagagcgagactc i macNem1.NW_012011355v1 C 0 I 24 s chlSab2.chr5 58212155 14 + 75399963 acagagtgagactc i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 504942 14 + 3907144 agagagtgagactc i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e saiBol1.JH378225 6318358 0 + 6628207 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=19892.000000 s hg38.chr16_GL383557v1_alt 33026 7 + 89672 tgtctca s panTro5.chr16 21459275 7 - 81586097 tgtctca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526011 7 - 90481686 tgtctca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758949 7 + 3010529 tgtctca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873791 7 + 163208435 tgtctca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344957 7 - 74971481 catctca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21054297 7 - 78541002 catctca i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58212169 7 + 75399963 tgtctca i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 504956 7 + 3907144 cgtctca i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e saiBol1.JH378225 6318358 0 + 6628207 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=16380.000000 s hg38.chr16_GL383557v1_alt 33033 4 + 89672 aaaa s panTro5.chr16 21459282 4 - 81586097 aaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526018 4 - 90481686 aaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758956 4 + 3010529 aaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873798 4 + 163208435 aaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21344964 4 - 74971481 aaaa i rheMac8.chr20 C 0 I 356 s macFas5.chr20 21054304 4 - 78541002 aaaa i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58212176 4 + 75399963 aaaa i chlSab2.chr5 C 0 I 1231 s colAng1.NW_012123265v1 504963 4 + 3907144 aaaa i colAng1.NW_012123265v1 C 0 I 7559 s saiBol1.JH378225 6318358 4 + 6628207 AAAA i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=8439.000000 s hg38.chr16_GL383557v1_alt 33037 7 + 89672 caaaaca s panTro5.chr16 21459286 7 - 81586097 caaaaca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526022 7 - 90481686 caaaaca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758960 7 + 3010529 caaaaca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873802 7 + 163208435 caaaaca i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21054308 7 - 78541002 aaggaat i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6318362 7 + 6628207 CAAAACA i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912828 0 + 1009443 C e aotNan1.NW_018500622v1 9264180 0 - 10531588 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=27532.000000 s hg38.chr16_GL383557v1_alt 33044 9 + 89672 aaataaaaa s panTro5.chr16 21459293 9 - 81586097 aaataaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526029 9 - 90481686 aaataaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758967 9 + 3010529 aaataaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873809 9 + 163208435 aaataaaaa i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21054315 9 - 78541002 aaatagaaa i macFas5.chr20 C 0 I 1134 s saiBol1.JH378225 6318369 9 + 6628207 AAATAAAAA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264180 9 - 10531588 aaataaaaa i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 912828 9 + 1009443 AAATGAAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=1387.000000 s hg38.chr16_GL383557v1_alt 33053 9 + 89672 aa--CACCAGT-- s panTro5.chr16 21459302 9 - 81586097 aa--CACCAGT-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526038 8 - 90481686 aa---aCCAGT-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758976 9 + 3010529 aa--CACCAGT-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873818 11 + 163208435 aaaaCACCAGT-- i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6318378 9 + 6628207 --ACCACCAAT-- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264189 9 - 10531588 --accaccaat-- i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 912837 10 + 1009443 ---ACAACCATAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80452551 17 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=16036.000000 s hg38.chr16_GL383557v1_alt 33062 7 + 89672 AAA-TAAA s panTro5.chr16 21459311 7 - 81586097 AAA-TAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526046 7 - 90481686 AAA-TAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758985 7 + 3010529 AAA-TAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53873829 7 + 163208435 AAA-TAAA i nomLeu3.chr2 C 0 M 1141 s saiBol1.JH378225 6318387 8 + 6628207 AAAGTAAA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264198 8 - 10531588 aaagtaaa i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80452568 7 + 88915250 AAG-TAAA i canFam3.chr5 I 17 C 0 s dasNov3.JH569970 912847 7 + 1009443 AAA-TAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I a score=8148.000000 s hg38.chr16_GL383557v1_alt 33069 3 + 89672 ACC s panTro5.chr16 21459318 3 - 81586097 ACC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526053 3 - 90481686 ACC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758992 3 + 3010529 ACC i gorGor5.CYUI01000018v1 C 0 C 0 s saiBol1.JH378225 6318395 3 + 6628207 ACC i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264206 3 - 10531588 aCC i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80452575 3 + 88915250 ACC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912854 3 + 1009443 ACC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e calJac3.chr20 21514293 0 - 44557958 C e otoGar3.GL873566 13686051 238 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=26069.000000 s hg38.chr16_GL383557v1_alt 33072 9 + 89672 TTTCTTGGA s panTro5.chr16 21459321 9 - 81586097 TTTCTTGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526056 9 - 90481686 TTTCTTGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 758995 9 + 3010529 TTTCTTGGA i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514293 9 - 44557958 TTTCTTGGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6318398 9 + 6628207 TTTCTTGGA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264209 9 - 10531588 TTTCTTGGA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80452578 9 + 88915250 TTCCCTTGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912857 9 + 1009443 TTCCTTGGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e otoGar3.GL873566 13686051 238 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=41830.000000 s hg38.chr16_GL383557v1_alt 33081 21 + 89672 CATTTCATTCAACTTTACTTA s panTro5.chr16 21459330 21 - 81586097 CATTTCATTCAACTTTACTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526065 21 - 90481686 CATTTCATTCAACTTTACTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759004 21 + 3010529 CATTTCATTCAACTTTACTTA i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514302 21 - 44557958 CATTTTATTCAACTCTAGGTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6318407 21 + 6628207 CATTTTATTCGACTCTAGGTA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264218 21 - 10531588 CATTTTATTCGACTCTAGGTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13686289 21 + 13852661 cattttctccagattttcctc i otoGar3.GL873566 I 238 C 0 s canFam3.chr5 80452587 21 + 88915250 CACTTCATTTAACTGTAGTTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912866 18 + 1009443 AGCTTCATTTAATGCTAA--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=29884.000000 s hg38.chr16_GL383557v1_alt 33102 23 + 89672 CTGGC----------TTTGCt-------tttttttttttt s panTro5.chr16 21459351 23 - 81586097 CTGGC----------TTTGCt-------tttttttttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526086 23 - 90481686 CTGGC----------TTTGCt-------tttttttttttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759025 23 + 3010529 CTGGC----------TTTGCt-------tttttttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514323 30 - 44557958 CTGCC----------ATTGCCttttttttttttttttttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6318428 11 + 6628207 CTGCC----------TTTGCC------------------- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264239 23 - 10531588 CTGCC----------CTTGCC-------tttttttttttt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13686310 33 + 13852661 ctatctcCTCAACATTTCGTT-------tctttctttctt i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80452608 23 + 88915250 CCATC----------AATGCT-------TCTTCTTTTTCT i canFam3.chr5 C 0 I 195 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912884 0 + 1009443 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=503573.000000 s hg38.chr16_GL383557v1_alt 33125 283 + 89672 ttttttttgagacaggatct--tgctctgttgtccaggctggagtacagtggcacaatcaccac----tgtagcctcgacctcctgg---gctcaag-aatcctcccacctcagcct-ctgagtagctgggactacaggtgcatgccaccacacccagctaatttttgcattttc----------------------tgtagagatggggtcttgc-catgttgcccaggctgg-------------------------------tctgaaactcctggcctcaagtgatcctcccacctcagcctcccaaagtgcttggattacaggtgtgagccactatgcctagc s panTro5.chr16 21459374 276 - 81586097 t-------gagacaggatct--tgctctgttgtccaggctggagtacagtggcacaatcaccac----tgtagcctcgacctcctgg---gctcaag-aatcctcccacctcagcct-ctgagtagctgggactacaggtgcatgccaccacacccagctaatttttgaattttc----------------------tgtagagatggggtcttgc-catgttgcccaggctgg-------------------------------tctgaaactcctggcctcaagtgatcctcccacctcagcctcccaaagtgcttggattacaggtgtgagccactatgcctagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526109 278 - 90481686 t-----ttgagacaggatct--tgctctgttgtccaggctggagtacagtggcacaatcaccac----tgtagcctcgacctcctgg---gctcaag-aatcctcccacctcagcct-ctgagtagctgggactacaggtgcatgccaccacacccagctaatttttgcattttc----------------------tgtagagatggggtcttgc-catgttgcccaggctgg-------------------------------tctgaaactcctggcctcaagtgatcctcccacctcagcctcccaaagtgcttggattacaggtgtgagccactatgcctagc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759048 281 + 3010529 t--tttttgagacaggatct--tgctctgttgtccaggttggagtacagtggcacaatcaccac----tgtagcctcgacctcctgg---gctcaag-aatcctcccacctcagcct-ctgagtagctgggactacaggtgcatgccaccacacccagctaatttttgcattttc----------------------tgtagagatggggtcttgc-catgttgcccaggctgg-------------------------------tctgaaactcctggcctcaagtgatcctcccacctcagcctcccaaagtgcttggattacaggtgtgagccactatgcctagc i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514353 288 - 44557958 ttttttttgagagagggtct--tgctctgctgttcaggctggagtaca-tggcacaatcatggct---tatagccttgatctcctgggctgctcaagcaatcctcccacctcagcctccggagtagctgcaactacaggtgcatgccaccacacccagccaatttttgcattttc----------------------tgtagagatggggtcttgc-catgttgcccaagctgg-------------------------------tctcaaactcctagcctcaagtgatcctcccaccttggcctcccaaagtgctcagattacagatgtaagccactatgcccagc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6318439 339 + 6628207 ttttttttgagacagggtct--tgctctgttgcccaggctggagtaca-tggcacaatcatggct---tgtacccttgacctcctgg---gctcaagcaatcctcccacctcagcctcctgagtagctgcaactacagatgcatgtcaccacacccagctaatttttgcattttcttttttttttttttttttttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatggcgcgatctcggctcaccgcaacctccgcctcctgggttcaggcaattctcctgcctcagcctcctgagtagctgggactacaggcacgcgccaccatgcccagc i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264262 285 - 10531588 ttttttttgagacagggtct--tgctctgctgtccaggctggagtaca-tggcaaaatcatggct---tgtagccttgacctcctgg---gctcaagcaatcctcccacctcagcctcctgagtagctgcaactacaggtgcatgccaccacacccaactaatttttgcattttc----------------------tgtagagatggggtcttgc-catgttgcccaagctgg-------------------------------tctcaaactcctggcctcaagtgatcctcccaccttggcctcccaaagtcctcagattacagatgtaagtcactatgcccagc i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13686343 273 + 13852661 tttttttggagatagattcccattctttgtcatcttcagtagagtgctctggc---gtcacagctcacagcaacctcaaactcctgg---actcaagcaattctcttgcctcagcctttcaagtatctcagactataggcacctgccataatgcccagcta------------tt----------------------tttagagacagagtctcac---tcttgctcaggctgg-------------------------------tctcaaacttctgagcttaggcagt-cacctgcctcagcctcccagagtgctaggattataggcatgagccaccatgcccATC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912884 0 + 1009443 C e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=4281.000000 s hg38.chr16_GL383557v1_alt 33408 6 + 89672 c--------GCCTT s panTro5.chr16 21459650 6 - 81586097 c--------GCCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526387 6 - 90481686 c--------GCCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759329 6 + 3010529 c--------GCCTT i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514641 6 - 44557958 T--------GCCTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6318778 6 + 6628207 t--------aattt i saiBol1.JH378225 C 0 I 270 s aotNan1.NW_018500622v1 9264547 6 - 10531588 T--------GCCTC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13686616 14 + 13852661 CCTGAACAATTCTT i otoGar3.GL873566 C 0 I 4 s dasNov3.JH569970 912884 6 + 1009443 C--------ACCTC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=79237.000000 s hg38.chr16_GL383557v1_alt 33414 44 + 89672 TGCCTCTTTCATTTTGCTGAGAAACTTTTTAAAAGCATAG--TCTA s panTro5.chr16 21459656 44 - 81586097 TGCCTCTTTCATTTTGCTGAGAAACTTTTTAAAAGCATAG--TCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526393 44 - 90481686 TGCCTCTTTCATTTTGCTGAGAAACTTTTTAAAAGCATAG--TCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759335 44 + 3010529 TGCCTCTTTCATTTTGCTGAGAAACTTTTTAAAAGCATAG--TCTA i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514647 37 - 44557958 TGCCTCTTTTATTTTGCTGAGAAGCTTTTT-------TAG--TCTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319054 37 + 6628207 TGCCTCTTTTATTTTGCTGAGAAGCTTTTT-------TAG--TCTA i saiBol1.JH378225 I 270 C 0 s aotNan1.NW_018500622v1 9264553 37 - 10531588 TGCCTCTTTTATTTTGCTGAGAAGCTTTTT-------TAG--TCTG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13686634 41 + 13852661 AACTCCTTTTCCCTTACCATAG-----TTTAAATGCAGGGGTTCTG i otoGar3.GL873566 I 4 C 0 s dasNov3.JH569970 912890 44 + 1009443 TGATTCTTTTATTTTGCTGAGAAACTTATTTAGagctcag--tcta i dasNov3.JH569970 C 0 I 30 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=263718.000000 s hg38.chr16_GL383557v1_alt 33458 141 + 89672 -gaccaggcatggtggtccacacctgtaatcccagcactttaggaggctgaggcgggcagatcac--gaggtcaagagattgagaccatcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaaattaactgg s panTro5.chr16 21459700 141 - 81586097 -gaccaggcatggtggtccacacctgtaatcccagcactttaggaggctgaggcgggcagattac--gaggtcaagagattgagatcatcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaaattaactgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526437 141 - 90481686 -gaccaggcatggtggtccacacctgtaatcccagcactttaggaggctgaggcgggcagattac--gaggtcaagagattgagaccatcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaaattaactgg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759379 141 + 3010529 -gaccaggcatggtggtccacacctgtaatcccagcactttgggaggctgaggcgggcagatcac--gaggtcaagagattgagaccatcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaaattaactgg i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514684 144 - 44557958 Cggccgagcatggtggctcatgcctgtaatcccagcactttgggaggctgagacaggtagaaaacctgagttcaggagttcgagaccagcctgaccaacatggagaaactccgtctctactaaaaatacaaaaaaattagccgg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319091 143 + 6628207 CAgccgggcacagtggctcactcctgtaatcccagcacttt-ggaggctggggcaggtagatcaccggaggtcaggagttcgagaccagcctgaacaatatggagaaatcccatttctactaaaaatacaaaaaaattagccgg i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9264590 144 - 10531588 Cggccagccacggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtagatcacctgaggtcaggagttcgagaccagcgtgatcaacatggagaaaccctgtctctactaaaaatacaaaaaaattagctgg i aotNan1.NW_018500622v1 C 0 I 347 s otoGar3.GL873566 13686675 139 + 13852661 -ggccaggcatggtagctcttgtctataaacctagcactccaggatgccaaggtcagtggattgcttgagcttaggagtttgagaccaacctgggtaaga--gtacaacctcatctctaccaaaa--acagaaaaaccagccag i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=35650.000000 s hg38.chr16_GL383557v1_alt 33599 29 + 89672 ------atgtggtggcacacacctgtagtcccagc s panTro5.chr16 21459841 29 - 81586097 ------atgtggtggcacacacctgtagtcccagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526578 29 - 90481686 ------atgtggtggcacacacctgtagtcccagc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759520 29 + 3010529 ------atgtggtggcacacacctgtagtcccagc i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21514828 28 - 44557958 ------gcatgg-agcacatgcctgtaatcccagc i calJac3.chr20 C 0 I 316 s saiBol1.JH378225 6319234 28 + 6628207 ------gcatgg-ggcacatgcctgtaatcccagc i saiBol1.JH378225 C 0 I 316 s otoGar3.GL873566 13686814 29 + 13852661 gccttcttgtgg------gcacctgcagtcccagc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=56286.000000 s hg38.chr16_GL383557v1_alt 33628 91 + 89672 tacttgggaggctgaggcaggagaattgcttgaacccaagacgcagaggttgcagtgaaccaagatcgtgccactgcactccagcctggcg s panTro5.chr16 21459870 91 - 81586097 tactcaggaggctgaggcaggagaattgcttgaacccaagacgcagaggttgcagtgagccaagatcgtggcactgcactccagcctggcg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526607 91 - 90481686 tactcaggaggctgaggcaggagaattgcttgaacccaagacgcagaggttgcagtgagccaagatcgtggcactgcactccagcctggcg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759549 91 + 3010529 tactcaggaggctgaggcaggagaattgcttgaacccaagacgcagaggttgcagtgagccaagatcgtgccactgcactccagcctggcg i gorGor5.CYUI01000018v1 C 0 C 0 s otoGar3.GL873566 13686843 48 + 13852661 tacttggtaggctgaggcaagaggatcacttgagcccaag-------------agTGAGCC------------------------------ i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760053 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774582 0 + 43916225 C e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=37387.000000 s hg38.chr16_GL383557v1_alt 33719 25 + 89672 acagagtgagactccgtctcaaaaa s panTro5.chr16 21459961 25 - 81586097 acagagtaagactccatctcaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526698 25 - 90481686 acagagtaagactccatctacaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759640 25 + 3010529 acagagtgagactccatctcaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s cerAty1.NW_011999143v1 20774582 25 + 43916225 acagagcgagactccatctcaaaaa i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760053 25 - 7209941 acagagcgagactccatctcaaaaa i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13686891 24 + 13852661 -CAGACTAAGACTCTGTCCAATAAA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=6034.000000 s hg38.chr16_GL383557v1_alt 33744 9 + 89672 aaaaaaaaa s panTro5.chr16 21459986 9 - 81586097 aaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526723 9 - 90481686 aaaaaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759665 8 + 3010529 aaaaaaaa- i gorGor5.CYUI01000018v1 C 0 C 0 s cerAty1.NW_011999143v1 20774607 9 + 43916225 aaggaataa i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760078 9 - 7209941 aaggaataa i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80452631 195 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686915 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1018.000000 s hg38.chr16_GL383557v1_alt 33753 2 + 89672 aa s panTro5.chr16 21459995 2 - 81586097 aa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526732 2 - 90481686 aa i panPan2.chr16 C 0 C 0 s cerAty1.NW_011999143v1 20774616 2 + 43916225 at i cerAty1.NW_011999143v1 C 0 I 2 s manLeu1.NW_012101698v1 6760087 2 - 7209941 at i manLeu1.NW_012101698v1 C 0 I 2 s canFam3.chr5 80452826 2 + 88915250 AA i canFam3.chr5 I 195 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e macNem1.NW_012011355v1 14450528 24 + 26466322 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686915 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M e gorGor5.CYUI01000018v1 759673 0 + 3010529 C a score=66095.000000 s hg38.chr16_GL383557v1_alt 33755 32 + 89672 aaa------GC-ATAGTCTACTCACTGCcttctgctcct s panTro5.chr16 21459997 38 - 81586097 aaaaaaaaaGC-ATAGTCTACTCACTGCcttctgctcct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21526734 36 - 90481686 aaa---aaaGCAATAGTCTACTCACTGACTTCTGCTCCT i panPan2.chr16 C 0 I 379 s gorGor5.CYUI01000018v1 759673 29 + 3010529 ---------GC-ATAGTCTACTCACTGCcttctgctcct i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14450552 32 + 26466322 ------aaaGC-ATAGtctactcactgccttctgctcct i macNem1.NW_012011355v1 I 24 C 0 s cerAty1.NW_011999143v1 20774620 32 + 43916225 ------aaaGC-ATAGTCTACTCACTGCcttctgctcct i cerAty1.NW_011999143v1 I 2 C 0 s manLeu1.NW_012101698v1 6760091 32 - 7209941 ------aaaGC-ATAGtctactcactgccttctgctcct i manLeu1.NW_012101698v1 I 2 C 0 s canFam3.chr5 80452828 32 + 88915250 ------AAAGC-ATGGTCTACTCACTGCctcttgatcct i canFam3.chr5 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686915 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=21234.000000 s hg38.chr16_GL383557v1_alt 33787 11 + 89672 gtcactttgct s panTro5.chr16 21460035 11 - 81586097 gtcactttgct i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759702 11 + 3010529 gtcactttgct i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14450584 11 + 26466322 gtcactttgct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774652 11 + 43916225 gtcactttgct i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760123 11 - 7209941 gtcactttgct i manLeu1.NW_012101698v1 C 0 C 0 s canFam3.chr5 80452860 11 + 88915250 gtcactctgct i canFam3.chr5 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 912934 30 + 1009443 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e panPan2.chr16 21526770 379 - 90481686 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686915 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=436002.000000 s hg38.chr16_GL383557v1_alt 33798 225 + 89672 gaaactgctctta-tgaggactc--caatggtcttgtatgctaatgatcaaacctaatgga--ctttttagctctcaactttcttcgcatctgtaatatctgaagatgctgatcacccccacctcctcgaaattcttgtctgtctgactaccactgcacacttttctccagattgtcctcttacctcctggaccattcctttccagattcttcttccttcaccctggctc s panTro5.chr16 21460046 225 - 81586097 gaaactgctctta-tgaggactc--caatggtcttgtatgctaatgatcaaacctaatgga--ctttttagctctcaactttcttcgcatctgtaatatctgaagatgctgatcacccccacctcctcgaaattcttgtctgtctgactaccactgcacacttttctccagattgtcctcttacctcctggaccattcctttccagattcttcttccttcaccctggctc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759713 224 + 3010529 gaaactgctctta-tgaggattc--caatggtctt-tatgctaatgatcaaacctaatgga--ctttttagctctcaactttcttcgcatctgtaatatctgaagatgctgatcacccccacctcctcgaaattcttgtctgtctgactaccactgcacacttttctccagattgtcctcttacctcctggaccattcctttccagattcttcttccttcaccctgactc i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14450595 225 + 26466322 gaaactgctctta-tgagaactc--cagtggtcttgtacgctaatgatcaaacccaatgga--ctttttagctctcaactttcttggcatctgtaatatctgaagatgccaatcacctccacctcctcgaaattcttgcctgtctgaccaccactgcacacttttctccagattgttctcttacctcccggacaattcctttccagattcttcctccttcgccctggctc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774663 225 + 43916225 gaaactgctctta-tgagaactc--cagtggtcttgtacgctaatgatcaaacccaatgga--ctttttagctctcaactttcttggcatctgtaatatctgaagatgccaatcacctccacctcctcgaaattcttgtctgtctgaccaccactgcacacttttctccagattgttctcttacctcccggacaattcctttccagattcttcctccttcgccctggctc i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760134 225 - 7209941 gaaactgctctta-tgagaactc--cagtggtcttgtacgctaatgatcaaacccaatgga--ctttttagctctcaactttcttggcatctgtaatatctgaggatgccaatcacctccacctcctcgaaattcttgtctgtctgaccaccactgcacacttttctccagattgttctcttacctcccggacaattcctttccagattcttcctccttcgccctggctc i manLeu1.NW_012101698v1 C 0 C 0 s canFam3.chr5 80452871 221 + 88915250 aaaattgctctta-tgagaactc--taatgatctggttctct----atcgagttcaatgga--ctttttagttcttgactttcttggcttctgtagtatctgaagatgctgattacattctcctttttagaattcttgccttgctgacttccactgcaacattttttctaggctctctccctacctcttggaccatttctttccatattcctcttcctgcactcctgttt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 912964 222 + 1009443 gaaacagctcttactgagaactccacaataatcttgttctctggttaacaaatccaacggactctttttagttctcaactttattggcttttgtagtatctgaagatgctgatcactc---cctccttgaaactcttgccttcctgacttctactataccattttctctagact---ctcccacaactccaaccatttctttccagattcctcttcctctaccc-gtct- i dasNov3.JH569970 I 30 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e panPan2.chr16 21526770 379 - 90481686 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686915 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=89261.000000 s hg38.chr16_GL383557v1_alt 34023 64 + 89672 taaatgtaggggttctgcaggattccatcctgattct--acttctcaatttgcactactctccgtt s panTro5.chr16 21460271 64 - 81586097 taaatgtaggggttctgcaggattccatcctgattct--acttctcaatttgcactactctccatt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 759937 64 + 3010529 taaatgtaggggttctgcaggattccatcctgattct--acttctcaatttgcactactctccgtt i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14450820 60 + 26466322 taaatgtaggggttctgcaggattccatcctgattct--acgtctcaatttgcactactctt---- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774888 59 + 43916225 taaatgtaggggttctacaggatttcatcctgattct--acgtctcaatttgca-gattttt---- i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760359 59 - 7209941 taaatgtaggggttctgcaggattccatcctgattct--acgtctcaatttgcagtactc-t---- i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13686915 66 + 13852661 taaatgcaggggttctgcaggattccatcctggttcttctcttgttaatttgtactgttctcgctt i otoGar3.GL873566 C 0 I 52 s canFam3.chr5 80453092 36 + 88915250 caaatgtatgggct---caggacacctgggtggctca--gc------------------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 913186 55 + 1009443 ttaatgatgggattctacacagttctgtcctacttct---ctttttaatctgtgctcc-------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e panPan2.chr16 21526770 379 - 90481686 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1092.000000 s hg38.chr16_GL383557v1_alt 34087 4 + 89672 tttt s panTro5.chr16 21460335 4 - 81586097 tttt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760001 4 + 3010529 tttt i gorGor5.CYUI01000018v1 C 0 I 3 e canFam3.chr5 80453128 0 + 88915250 C e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913241 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e panPan2.chr16 21526770 379 - 90481686 I e macNem1.NW_012011355v1 14450880 0 + 26466322 C e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e manLeu1.NW_012101698v1 6760418 0 - 7209941 C e chlSab2.chr5 58212180 1231 + 75399963 I e cerAty1.NW_011999143v1 20774947 0 + 43916225 C e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686981 52 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=19110.000000 s hg38.chr16_GL383557v1_alt 34091 10 + 89672 tttttttttt s panTro5.chr16 21460339 10 - 81586097 tttttttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527149 10 - 90481686 tttttttttt i panPan2.chr16 I 379 C 0 s gorGor5.CYUI01000018v1 760008 10 + 3010529 tttttttttt i gorGor5.CYUI01000018v1 I 3 C 0 s macNem1.NW_012011355v1 14450880 10 + 26466322 tttttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774947 10 + 43916225 tttttttttt i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760418 10 - 7209941 tttttttttt i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80453128 0 + 88915250 C e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913241 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e otoGar3.GL873566 13686981 52 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=19452.000000 s hg38.chr16_GL383557v1_alt 34101 8 + 89672 ttttttga s panTro5.chr16 21460349 6 - 81586097 tttt--ga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527159 8 - 90481686 ttttttga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760018 8 + 3010529 ttttttga i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14450890 8 + 26466322 ttttttga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774957 8 + 43916225 ttttttga i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760428 8 - 7209941 ttttttga i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687033 8 + 13852661 ttttttga i otoGar3.GL873566 I 52 C 0 s dasNov3.JH569970 913241 7 + 1009443 -cttttga i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80453128 0 + 88915250 C e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=230335.000000 s hg38.chr16_GL383557v1_alt 34109 108 + 89672 gatggagtctcactctgttgcccaggctggagtgc---agtgctgtgatctcggctcactgcaatctccacctcctg---ggttcatgc--cattctcctgcctcagcctcccgag s panTro5.chr16 21460355 108 - 81586097 gatggagtctcgctctgttgcccaggctggagtgc---agtggtgtgatcttggctcactgcaatctccacctcctg---ggttcatgc--cattctcctgcctcagcctcccgag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527167 108 - 90481686 gatggagtctcgctctgttgcccaggctggagtgc---agtggtgtgatcttggctcactgcaatctccacctcctg---ggttcatgc--cattctcctgcctcagcctcccgag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760026 108 + 3010529 gatggagtctcgctctgttgcccaggctggagtgc---agtggtgtgatctcggctcactgcaatctccacctcctg---ggttcatgc--cattctcctgcctcagcttcccgag i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14450898 108 + 26466322 gacagagtctcgctctgttgcccaggctggagtac---agtggtgcaatctcagctcactgcaatctctgcctcccg---ggttcacgc--cattctcctgcctcagcgtcccgag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20774965 108 + 43916225 gacagagtctcgctctattgcccagactgcagtgc---agtggtgcaatctcagctcactgcaatctctgcctcccg---ggttcacgc--cattctcctgcctcagtctcccgag i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760436 108 - 7209941 gacagagtctcgctctgttgtccaggctggagtgc---agtggtgcaatctcggctcactgcaatctctgcctcccg---ggttcacgc--cattctcctgcctcagcctcccgag i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687041 108 + 13852661 gacagagtctcactctatcgcccaggctagagtac---catggcctcagcctagctcacagcaacctcaaactcctg---ggatcaagc--aatccgactgccttagcctacttac i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80453128 107 + 88915250 ggttgagtgtccgcctttggctcagggtgtgatccctgagtcctgggatcgagtcccgcatcgg-----acttcctgtatggatcctgcttctctctcctgcctgtgtctct---- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913248 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=41333.000000 s hg38.chr16_GL383557v1_alt 34217 15 + 89672 tagctgggactacaa s panTro5.chr16 21460463 15 - 81586097 tagctgggactacag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527275 15 - 90481686 tagctgggactacag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760134 15 + 3010529 tagctgggactacag i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14451006 15 + 26466322 tagctgggactacag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775073 15 + 43916225 tagctgggactacag i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760544 15 - 7209941 tagctgggactacag i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687149 15 + 13852661 tggctggaactacaa i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 913248 15 + 1009443 tgactgtatctacaa i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80453235 0 + 88915250 C e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=77152.000000 s hg38.chr16_GL383557v1_alt 34232 42 + 89672 gcgcccgccaccacgcccggctaatttttttgtatttttagt s panTro5.chr16 21460478 42 - 81586097 gcgcccgccaccacgcccagctaatttttttgtatttttagt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527290 41 - 90481686 gcgcccgccaccacgcccagctaa-ttttttgtatttttagt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760149 42 + 3010529 gcgcccgccaccacccccggctaatttttttgtatttttagt i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14451021 41 + 26466322 gcacccgccaccatg-ccagctaatttttttgcatttttagt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775088 41 + 43916225 gcacccgccaccacg-ccagctaatttttttgcatttttagt i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760559 41 - 7209941 gcacccgccaccacg-ccagcgaatttttttgcatttttagt i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687164 40 + 13852661 gtgcccatcacaacccctggctaatttttct--atttttagt i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80453235 23 + 88915250 -------------------gcttctctctctgtgtctctcat i canFam3.chr5 C 0 I 81 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=100153.000000 s hg38.chr16_GL383557v1_alt 34274 54 + 89672 agagacagggt-ttcaccccgttagccaggttggtcttgatctcctg---acctcgtg s panTro5.chr16 21460520 54 - 81586097 agagacagggt-ttcaccctgttagccaggttggtcttgatctcctg---acctcgtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527331 54 - 90481686 agagacagggt-ttcaccctgttagccaggttggtcttgatctcctg---acctcgtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760191 54 + 3010529 agagacagggt-ttcaccccgttagccaggatggtcttgatctcctg---acctcgtg i gorGor5.CYUI01000018v1 C 0 C 0 s macNem1.NW_012011355v1 14451062 54 + 26466322 agagacggcat-ttcaccgtgttagccaggatggtctcgatctcctg---acctcgtg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775129 54 + 43916225 agagacagcgt-ttcaccgtgttagccaggatggtctcgatctcctg---acctcgtg i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760600 54 - 7209941 agagacagcgt-ttcaccgtgttagccaggatggtctcgatctcctg---acctcgtg i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687204 55 + 13852661 agacatggggtcttgatcttgct---caggctggtctggaatgcctgagaaatgggtg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80453258 81 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e macFas5.chr20 21054324 1134 - 78541002 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=19651.000000 s hg38.chr16_GL383557v1_alt 34328 9 + 89672 atccgcctg s panTro5.chr16 21460574 9 - 81586097 atctgcctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527385 9 - 90481686 atctgcctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760245 9 + 3010529 atccgcctg i gorGor5.CYUI01000018v1 C 0 C 0 s macFas5.chr20 21055458 9 - 78541002 atccaccca i macFas5.chr20 I 1134 C 0 s macNem1.NW_012011355v1 14451116 9 + 26466322 atccaccca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775183 9 + 43916225 atccaccca i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760654 9 - 7209941 atccaccca i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687259 9 + 13852661 accctccca i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80453258 81 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e rheMac8.chr20 21344968 356 - 74971481 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=191317.000000 s hg38.chr16_GL383557v1_alt 34337 51 + 89672 cctcggcctcccaaagtgctgggattacaggcatgagccacgacacctggc s panTro5.chr16 21460583 51 - 81586097 cctcagcctcccaaagtgctgggattacaggcatgagccaccacacctggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527394 51 - 90481686 cctcagcctcccaaagtgctgggattacaggcatgagccaccacacctggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760254 51 + 3010529 cctcagcctcccaaagtgctgggattacaggcatgagccaccacacctggc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345324 51 - 74971481 cctcagcctcccaaagtgctaggattacaggcgtgagccaccacacctggc i rheMac8.chr20 I 356 C 0 s macFas5.chr20 21055467 51 - 78541002 cctcagcctcccaaagtgctaggattacaggcgtgagccaccacacctggc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451125 51 + 26466322 cctcagcctcccaaagtgctaggattacaggcgtgagccaccacacctggc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775192 51 + 43916225 cctcagcctcccaaagtgctaggattacaggcgtgagccaccacacctggc i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760663 51 - 7209941 cctcagcctcccaaagtgctaggattacaggcgtgagccaccacacctggc i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13687268 48 + 13852661 cctgggcctcccagagcactacgattataggtgtgagcc---acATCCGAC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80453258 81 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e saiBol1.JH378225 6319262 316 + 6628207 I e calJac3.chr20 21514856 316 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=6600.000000 s hg38.chr16_GL383557v1_alt 34388 1 + 89672 c s panTro5.chr16 21460634 1 - 81586097 c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527445 1 - 90481686 c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760305 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345375 1 - 74971481 c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055518 1 - 78541002 c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451176 1 + 26466322 c i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775243 1 + 43916225 c i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760714 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21515172 1 - 44557958 c i calJac3.chr20 I 316 C 0 s saiBol1.JH378225 6319578 1 + 6628207 c i saiBol1.JH378225 I 316 C 0 s otoGar3.GL873566 13687316 1 + 13852661 C i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80453258 81 + 88915250 I e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=2058.000000 s hg38.chr16_GL383557v1_alt 34389 2 + 89672 -ta s panTro5.chr16 21460635 2 - 81586097 -ta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527446 2 - 90481686 -ta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760306 2 + 3010529 -ta i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345376 2 - 74971481 -ta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055519 2 - 78541002 -Ta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451177 2 + 26466322 -ta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775244 2 + 43916225 -ta i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760715 2 - 7209941 -ta i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21515173 2 - 44557958 -tt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319579 2 + 6628207 -tc i saiBol1.JH378225 C 0 C 0 s canFam3.chr5 80453339 2 + 88915250 ct- i canFam3.chr5 I 81 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e aotNan1.NW_018500622v1 9264734 347 - 10531588 I e cebCap1.NW_016107433v1 3303291 890 - 5917169 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e otoGar3.GL873566 13687317 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=48854.000000 s hg38.chr16_GL383557v1_alt 34391 6 + 89672 ctctct s panTro5.chr16 21460637 6 - 81586097 ctctct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527448 6 - 90481686 ctctct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760308 6 + 3010529 ctctct i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345378 6 - 74971481 ctctct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055521 6 - 78541002 ctctct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451179 6 + 26466322 ctctct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775246 6 + 43916225 ctctct i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760717 6 - 7209941 ctctct i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21515175 6 - 44557958 ctctct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319581 6 + 6628207 ctcttt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304181 6 - 5917169 ctctct i cebCap1.NW_016107433v1 I 890 C 0 s aotNan1.NW_018500622v1 9265081 6 - 10531588 ctctct i aotNan1.NW_018500622v1 I 347 C 0 s canFam3.chr5 80453341 6 + 88915250 ctccct i canFam3.chr5 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913263 0 + 1009443 C e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e otoGar3.GL873566 13687317 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=160644.000000 s hg38.chr16_GL383557v1_alt 34397 25 + 89672 caatgatttcatccacactcacgcg s panTro5.chr16 21460643 25 - 81586097 caatgatttcatccacactcacgcg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527454 25 - 90481686 caatgatttcatccacactcacgcg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760314 25 + 3010529 caatgatttcatccacactcatgca i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345384 25 - 74971481 caatgacttcatccacactcacgca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055527 25 - 78541002 caatgacttcatccacactcaggca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451185 25 + 26466322 caatgacttcatccacactcacgca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775252 25 + 43916225 caatgacttcatccacactcacgca i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760723 25 - 7209941 caatgacttcatgcacactcacgca i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21515181 25 - 44557958 tgatgacttcatccacactcatgcg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319587 25 + 6628207 tgatgacttcatccacactcatgtg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304187 25 - 5917169 tgatgacttcatctacactcatgag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265087 25 - 10531588 tgatgacttcatccacactcatgcg i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80453347 25 + 88915250 tgatgattacatctacactcgtggc i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 913263 10 + 1009443 ccatggtttc--------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e colAng1.NW_012123265v1 504967 7559 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e otoGar3.GL873566 13687317 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1299115.000000 s hg38.chr16_GL383557v1_alt 34422 149 + 89672 tcaattaccacttctaccctgatatctcgtaaatcttcatctca--gt--tgacatttctcttgattacagtcctaaacatccagccggctactgacc-ttttccaccaagatgtcacgcaggtaattcaaattcaacttgccccaaactaaac--- s panTro5.chr16 21460668 149 - 81586097 tcaattaccacttctaccctgatatctcgtaaatcttcatctca--gt--tgacatttctcttgattacagtcctaaacatccagccggctactgacc-ttttccaccaagatgtcatgcaggtaattcaaattcaacttgccccaaactaaac--- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527479 149 - 90481686 tcaattaccacttctaccctgatatctcgtaaatcttcatctca--gt--tgacatttctcttgattacagtcctaaacatccagccggctactgacc-ttttccaccaagatgtcatgcaggtaattcaaattcaacttgccccaaactaaac--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760339 149 + 3010529 tcaattaccacttctaccctgatatctcgtaaatcttcatctca--gt--tgacatttctcttgattacagtcctgaacatccagccggctactgacc-ttttccaccaagatgtcacgcaggtaattcaaattcaacttgccccaaactaaac--- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345409 149 - 74971481 tcaattatcacttctatcctgacatctcataaatcttgatctca--gt--tgacatttctcttgattacagtcctgaatgcccagccagctactgacc-ttttccaccaagatgtcacacaggtaattcaaattcaacatgccccaaactaaac--- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055552 149 - 78541002 tcaattatcaattctatcctgacatctcataaatcttgatctca--gt--tgacatttctcttgattacagtcctgaatgcccagccagctactgacc-ttttccaccaagatgtcacacaggtaattcaaattcaacatgccccaaactaaac--- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451210 149 + 26466322 tcaattatcacttctatcctgacatctcataaatcttgatctca--gt--tgacatttctcttgattacagtcctgaatgcccagccagctactgacc-ttttccaccaagatgtcacacaggtaattcaaattcaacatgccccaaactaaac--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775277 149 + 43916225 tcaattatcacttctatcctgacatctcataaatcttgatctca--gt--tgacatttctcttgattacagtcctgaatgcccaggcagctacggacg-ttttccaccaagatgtcacacaggtaattcaaattcaacatgccccaaactaaac--- i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760748 149 - 7209941 tcaattatcacttctatcctgacatctcataaatcttgatctca--gt--tgacatttctcttgattacagtcctgaatgcccagccagctactgacc-ttttccaccaagatgtcacacaggtaattcaaattcaacatgccccaaactaaac--- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512526 149 + 3907144 tcaattaccacttctatcctgacatctcacaaattttcatctca--gt--tgacatttctcttgattacagtcctgaatgcccagccagctactgacc-ttttccaccaagatgtcacacaggtaattcaaattcaacatgccccaaactaaac--- i colAng1.NW_012123265v1 I 7559 C 0 s calJac3.chr20 21515206 150 - 44557958 tcaattactacttctaccctgacatctgataaatcttcatttca--gc--tgacattactcttggttacagacctgtacttccagccagctactgacctttttccaccgagatgtcacacaggtaattcaaattaaacatgccccacactaaac--- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319612 150 + 6628207 tcaattactatttctaccctgacatctggtaaatcttcatctca--gc--tgacatttctcttggttacagacctgtacttccagccggctactgacctttttccaccaagaggtcacacagataattcaaattaaacatgccccacactaaac--- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304212 150 - 5917169 tcaattactacttccaccctgacatctggtaaatcttcatccca--gc--ttacatttctcttggttacagacctgtacttccagccagctactgacctttttctactgagatgtcacacaggtaattcaaattaaacatgccccacactaaac--- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265112 150 - 10531588 tcaattactacttctaccctgacatctggtaaatcttcatctca--gc--tgacatttctgttggttacagacctgtacttccagccagctactgacctttttccaccgagatgtcacacaggtaattcaaattaaacatgtcccacactaaac--- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13687317 124 + 13852661 ---------------------ATGTCTCATATATCTTCACCTCATTAC--TGACA---CTCCTGACTACAGACTTGTACTTCCAACCAGCTACTGGCC-TTTTCCTTCAAGATGTCACACAGGTAAC---AATTCAACATGCCCCAggccaggc--- i otoGar3.GL873566 C 0 I 289 s canFam3.chr5 80453373 144 + 88915250 tcaatgaccacctctaccctgatagctcataaatctttgt------tc--tcacatttctcttgattatggacc-acacttcagaccagctattggac-ctttgcaccaggatgtcacacaggtaattcttattcaacatgccccaaaccaaac--- i canFam3.chr5 I 1 I 3 s dasNov3.JH569970 913273 113 + 1009443 --aattatcattgcca-cctgatagctcataaatcttcaccgta--gttctgacatttctcttga-------cctgt----------------------acttcctcctggatagtatacaggcaac----------catggcccaaatcaaactcc i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e chlSab2.chr5 58212180 1231 + 75399963 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=447529.000000 s hg38.chr16_GL383557v1_alt 34571 53 + 89672 ttatcttcactcagaaaactagcttgccctctgttcatttcagtttcatagtt- s panTro5.chr16 21460817 53 - 81586097 ttatcttcactcagaaaactagcttgccttctgttcatttcagtttcatagtt- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527628 53 - 90481686 ttatattcactcagaaaactagcttgccttctgttcatttcagtttcatagtt- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760488 53 + 3010529 ttatcttcactcagaaaactagcttgccctctgttcatttcagtttcatagtt- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345558 53 - 74971481 ttatcttcacccagaaaactagtttgtcctctgttcattttagtttcacagtt- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055701 53 - 78541002 ttatcttcactcagaaaactagtttgtcctctgttcattttagtttcacagtt- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451359 53 + 26466322 ttatcttcactcagaaaactagtttgtcctctgttcattttagtttcacagtt- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775426 53 + 43916225 ttatcttcactcagaaaactagtttgtcctctgttcattttagtttcacagtt- i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760897 53 - 7209941 ttatcttcactcagaaaactagtttgtcctctgttcattttagtttcacagtt- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512675 53 + 3907144 ttatcttcactcagaaaactagtttgtcctcagttcattttggtttcacagtt- i colAng1.NW_012123265v1 C 0 I 17 s calJac3.chr20 21515356 51 - 44557958 ttaccttcactcagaaaactagtttgtcctctgttcattttggtttc--agtt- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319762 51 + 6628207 ttaccttcactcagaaaactagtttgtcctctgttcattttgatttc--agtt- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304362 51 - 5917169 ttaccttcactcagaaaactaggttgtcctctgttcattttggtttc--agtt- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265262 51 - 10531588 ttaccttcactcagaaaactagtttgtcctctgttcattttggtttc--agtt- i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80453520 52 + 88915250 ttatcctcacccaaaacac-agtacttcccctgttactcttggcttcatagtt- i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 913386 52 + 1009443 ttattttcaccctgaaaattagttcctcctctgttcagtttggtttc--agtct i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e chlSab2.chr5 58212180 1231 + 75399963 I e otoGar3.GL873566 13687441 289 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=81032.000000 s hg38.chr16_GL383557v1_alt 34624 12 + 89672 atccaccttctc s panTro5.chr16 21460870 12 - 81586097 atccaccttctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527681 12 - 90481686 atccaccttctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760541 12 + 3010529 atccagcttctc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345611 12 - 74971481 atccagcttctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055754 12 - 78541002 atccagcttctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451412 12 + 26466322 atccagcttctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775479 12 + 43916225 atccagcttctg i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760950 12 - 7209941 atccagcttctg i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21515407 12 - 44557958 atccagcttccc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319813 12 + 6628207 atccagcttccc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304413 12 - 5917169 atccagctttcc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265313 12 - 10531588 atccagcttccc i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80453572 12 + 88915250 atctggtttccc i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 913438 12 + 1009443 acacagtttccc i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e colAng1.NW_012123265v1 512728 17 + 3907144 I e chlSab2.chr5 58212180 1231 + 75399963 I e otoGar3.GL873566 13687441 289 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=335804.000000 s hg38.chr16_GL383557v1_alt 34636 40 + 89672 aagtcagaaatccaggagttagcctccatttctttctctt s panTro5.chr16 21460882 40 - 81586097 aactcagaaatccaggagttagcctccatttctttctctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527693 40 - 90481686 aagtcagaaatccaggagttagcctccatttctttctctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760553 40 + 3010529 aagtcagaaatccaggagttagcctccatttctttctctt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345623 40 - 74971481 aagccagatatccaggagttagcctccagttctttctctT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055766 40 - 78541002 aagccagatatccaggagttagcctccagttctttctctT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451424 40 + 26466322 aagccagatatccaggagttagcctccagttctttctctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775491 40 + 43916225 aagccagatatccaggagttagcctccagttctttctctt i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6760962 40 - 7209941 aagccagatatccaggagttagcctccagttctttctctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512745 40 + 3907144 aagccagatatccaggagttagcctccatttctttctctt i colAng1.NW_012123265v1 I 17 C 0 s calJac3.chr20 21515419 39 - 44557958 aagctagaaatccagaagtta-cctccatttctttctctt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319825 39 + 6628207 aagctagaaatccagaagtta-cctccatttctttctctt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304425 39 - 5917169 aagctagaaatccagaagtta-cctccatttctttctctt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265325 39 - 10531588 aagctagaaatccagaagtta-cctccatttctttctctt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80453584 40 + 88915250 aggccagaaatctaaaagttatcctctacttttctctttc i canFam3.chr5 C 0 I 3 s dasNov3.JH569970 913450 40 + 1009443 aagctagagaactgggggctttactccatgtctctctctc i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e chlSab2.chr5 58212180 1231 + 75399963 I e otoGar3.GL873566 13687441 289 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=620553.000000 s hg38.chr16_GL383557v1_alt 34676 70 + 89672 -------aagacctcaAA-----CATTTAGGCCTGTTG-TTTCTATC---TCACTATTTCTCCGCTTCATACTATCCTATCCAGTC s panTro5.chr16 21460922 70 - 81586097 -------aagacctcaAA-----CATTTAGGCCTGTTG-TTTCTATC---TCACTATTTCTCCGCTTCATACTATCCTATCCAGTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527733 70 - 90481686 -------aagacctcaAA-----CATTTAGGCCTGTTG-TTTCTATC---TCACTATTTCTCCGCTTCATACTATCCTATCCAGTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760593 70 + 3010529 -------aagacctcaAA-----CATTTAGGCCTGTTG-TTTCTATC---TCACTATTTCTCCGCTTCATACTGTCCTATCCAGTC i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345663 70 - 74971481 -------AAGACCTTAAA-----CATTTAGGCCTGTTG-TTTCCATC---TCACCATTTCTCCACTACATACTGTCCTATCCAGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055806 70 - 78541002 -------AAGACCTTAAA-----CATTTAGGCCTGTTG-TTTCCATC---TCACCATTTCTCCACTACATACTGTCCTATCCAGTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451464 70 + 26466322 -------aagaccttaaa-----catttaggcctgttg-tttccatc---tcaccatttctccactacatactgtcctatccagtc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775531 70 + 43916225 -------aagaccttaaa-----catttaggcctgttg-tttccatc---tcaccatttctccactacatactgtcctatccagtc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213411 70 + 75399963 -------aagaccttaaa-----catttaggcctgttg-tttccatc---tcactatttctccactacatactgtcctatccagtc i chlSab2.chr5 I 1231 C 0 s manLeu1.NW_012101698v1 6761002 70 - 7209941 -------aagaccttaaa-----catttaggcctgttg-tttccatc---tcaccatttctccactacatactgtcctatccagtc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512785 70 + 3907144 -------aagaccttaaa-----catttaggcctgttg-tttctatc---tcactatttctccactacatactgtcctatccagtc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515458 66 - 44557958 -------cagacctcaaa-----tattcagacctgttg-tttctttc-------tatttctccacttcacactgtcctatgcagtc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319864 70 + 6628207 -------cagacctcaaa-----cattcagatccgttc-tttctttc---tcaatatttctccacttcacactgtcctatccagtc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304464 71 - 5917169 -------cagacctcaaa-----cattcagacctgttcttttctttc---tcgctatttctccacttcacactgtcctatccagtc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265364 70 - 10531588 -------cagacctcaaa-----cattcagacctgttg-tttctttc---tcactatttctccacttcacactgccctatccagtc i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80453627 78 + 88915250 -------caacccccaaactgatcatttagacctgatg-tttctatcttcttaatatttcTTAGCTTCACATTGTCCCATCCAGTC i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 913490 55 + 1009443 accaccaaacaaattcat-----caTTTAG---------TTTTTATC---TC------------CTTTATACAA--CTCCCCAGGC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e otoGar3.GL873566 13687441 289 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=22920.000000 s hg38.chr16_GL383557v1_alt 34746 2 + 89672 TC s panTro5.chr16 21460992 2 - 81586097 TC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527803 2 - 90481686 TC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760663 2 + 3010529 TC i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345733 2 - 74971481 TC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055876 2 - 78541002 TC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451534 2 + 26466322 tc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775601 2 + 43916225 tc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213481 2 + 75399963 tc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761072 2 - 7209941 tc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512855 2 + 3907144 tc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515524 2 - 44557958 tc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319934 2 + 6628207 tc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304535 2 - 5917169 tc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265434 2 - 10531588 tc i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80453705 2 + 88915250 TC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913545 0 + 1009443 C e otoGar3.GL873566 13687441 289 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=256377.000000 s hg38.chr16_GL383557v1_alt 34748 31 + 89672 ACTATACTTATGGTGTCAC----A-TAGCCTCCTAA s panTro5.chr16 21460994 31 - 81586097 ACTATACTTATGGTGTCAC----A-TAGCCTCCTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527805 31 - 90481686 ACTATACTTATGGTGTCAC----A-TAGCCTCCTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760665 31 + 3010529 ACTATACTTATGGTGTCAC----A-TAGCCTCCTAA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345735 32 - 74971481 GCTATCCTTATGGTGTCAC---AA-TAGCCTCCTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055878 32 - 78541002 GCTATCCTTATGGTGTCAC---AA-TAGCCTCCTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451536 32 + 26466322 gctatccttatggtgtcac---aa-tagcctcctaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775603 32 + 43916225 gctatccttatggtgtcac---aa-tagcctcctaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213483 32 + 75399963 gatatccttatggtgtcac---aa-tagcctcctaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761074 32 - 7209941 gctatccttatggtgtcac---aa-tagcctcctaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512857 32 + 3907144 gctatccttatggtgtcac---aa-tagcctcctaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515526 33 - 44557958 actatccttatggtgttgc---aattagcctcctaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319936 33 + 6628207 actatccttacggtgttgc---aattagcctcctaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304537 33 - 5917169 actatccttatggtgttgc---aattagcctcctaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265436 33 - 10531588 actatccttatagtgttgc---aattagcctcctaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13687730 35 + 13852661 ACCAAACTTATCTTCCCTCCCAAA-CTATCTCCTCT i otoGar3.GL873566 I 289 I 1 s canFam3.chr5 80453707 30 + 88915250 ACTATCTTTATGGTGTTGC---AA-CAGTGTCCT-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54919309 632 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2928914 633 + 9850184 I e dasNov3.JH569970 913545 0 + 1009443 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=932481.000000 s hg38.chr16_GL383557v1_alt 34779 71 + 89672 CTGCTTTCCCTTACCTCGTATCTGGAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC s panTro5.chr16 21461025 71 - 81586097 CTGCTTTCCCTTACCTCGTATCTGGAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527836 71 - 90481686 CTGCTTTCCCTTACCTCGTATCTGGAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760696 71 + 3010529 CTGCTTTCCCTTACCTCGTATCTGGAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345767 71 - 74971481 CTGCTTTACCTTACCTCGTGTCTACAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055910 71 - 78541002 CTGCTTTACTTTACCTCGTGTCTACAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451568 71 + 26466322 ctgctttaccttacctcgtgtctacagctcctatactccatctgccactctcaactttctaaaacatTTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775635 71 + 43916225 ctgctttccctTACCTCGTGTCTACAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213515 71 + 75399963 ctgctttccctTACCTCGTGTCTATAGCTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761106 71 - 7209941 ctgctttcccttacctcgtgtctacagctcctatactccatctgccactctcaactttctaaaacatTTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512889 71 + 3907144 ctgctttccctTACCTCGTGTCTACAGCTCCTATACTCCATCTGCCATTCTCAACTTTCTAAAACATTTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515559 71 - 44557958 ctgcttttcctTACTTGATGTCTGGAGGTCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6319969 71 + 6628207 ctgcttttcctTACTTGATGTCTGGAGGTCCTATACTCCATCTGTCACTCTCAACTTTCTACAACATTTTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304570 71 - 5917169 ctgcttttcctTACTTGATGTCTGGAGATCCTATACTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265469 71 - 10531588 ctgcttttcctTACTTGATGTCTGGAGGTCCTATATTCCATCTGCCACTCTCAACTTTCTAAAACATTTTC i aotNan1.NW_018500622v1 C 0 I 341 s micMur3.chr20 54919941 71 + 72247402 ctgctttcccttacctcTTATCTTGAGCTCCTACACTCCATCTGCCACTCTCAACTTTCTAAAACACCACT i micMur3.chr20 I 632 I 1 s proCoq1.NW_012152729v1 2929547 71 + 9850184 ctgctttcccttacctcaTGTCTTGAGCTCCTACACTCCATCTGCCACTCTCAACTTTCTAAAACATCACT i proCoq1.NW_012152729v1 I 633 I 1 s otoGar3.GL873566 13687766 71 + 13852661 CTGCCTTTTCTTACCTTATGTCTTAAACTCCTACACTCCATCTGCCACTCTTGACTTTCTAAAATATCATT i otoGar3.GL873566 I 1 I 1 s canFam3.chr5 80453737 69 + 88915250 --GCTTGCCCTTACGTCATGTCTTGAACTCCTACAATCCATCTGCCCTTCTGAACTTCCTAAGACATCACT i canFam3.chr5 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e dasNov3.JH569970 913545 0 + 1009443 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=205893.000000 s hg38.chr16_GL383557v1_alt 34850 14 + 89672 --------------CCTCATTTAAAGCA s panTro5.chr16 21461096 14 - 81586097 --------------CCTCATTTAAAGCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527907 14 - 90481686 --------------CCTCATTTAAAGCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760767 14 + 3010529 --------------CCTCATTTAAAGCA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345838 14 - 74971481 --------------CCTCATTTAAAGCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055981 14 - 78541002 --------------CCTCATTTAAAGCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451639 14 + 26466322 --------------CCTCATTTAAAGCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775706 14 + 43916225 --------------CCTCATTTAAAGCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213586 14 + 75399963 --------------CCTCATTTAAAGCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761177 14 - 7209941 --------------CCTCATTTAAAGCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512960 14 + 3907144 --------------CCTCATTTAAAGCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515630 14 - 44557958 --------------CCTTGTTTAAAGCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6320040 14 + 6628207 --------------CCTCATTTAAAGCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304641 14 - 5917169 --------------CCTCATTTAAAGCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265881 14 - 10531588 --------------CCTCATTTAAAGCA i aotNan1.NW_018500622v1 I 341 C 0 s micMur3.chr20 54920013 14 + 72247402 --------------CCTCATTTAAAGCA i micMur3.chr20 I 1 C 0 s proCoq1.NW_012152729v1 2929619 14 + 9850184 --------------CCTCATTTAAAGCC i proCoq1.NW_012152729v1 I 1 C 0 s otoGar3.GL873566 13687838 14 + 13852661 --------------CCTCATTTAAAGCA i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80453806 28 + 88915250 CCCTCTTTTAAAACACTCATTTAAAGCA i canFam3.chr5 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e dasNov3.JH569970 913545 0 + 1009443 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=255937.000000 s hg38.chr16_GL383557v1_alt 34864 21 + 89672 C-------------------------------TTTGGCAGCAACCTgtggcc s panTro5.chr16 21461110 21 - 81586097 C-------------------------------TTTGGCAGCACCCTgtggcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527921 21 - 90481686 C-------------------------------TTTGGCAGCACCCTgtggcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760781 21 + 3010529 C-------------------------------TTTGGCAGCACCCTgtggcc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345852 21 - 74971481 C-------------------------------TTTGGCAGCATCCTGTGGCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21055995 21 - 78541002 C-------------------------------TTTGGCAGCATCCTgtggcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451653 21 + 26466322 C-------------------------------TTTGGCAGCATCCTGTGGCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775720 21 + 43916225 C-------------------------------TTTGGCAGCACCCTGTGGCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213600 21 + 75399963 C-------------------------------TTTGGCAGCACCCTGTGGCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761191 21 - 7209941 C-------------------------------TTTGGCAGCACCCTgtggcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512974 21 + 3907144 C-------------------------------TTTGGCAGCACCCTGTAGCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515644 21 - 44557958 C-------------------------------TTCGGCAGCACCCTGTGGCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6320054 21 + 6628207 C-------------------------------TTCGGCAGCACCCTGTGGCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3304655 21 - 5917169 C-------------------------------TTCGGCAGCACCCTgtggcc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265895 21 - 10531588 C-------------------------------GTTGGCAGCACCCTgtggcc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920027 21 + 72247402 C-------------------------------TTTAGCAGCACCCCATGGTC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2929633 21 + 9850184 C-------------------------------TTTAGCAGCACCCCATGGTC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13687852 21 + 13852661 C-------------------------------TTTAGCAACACCCCATGGTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80453834 52 + 88915250 CTTAAATTAgggatccctgggtggcgcagcggtttggcgcctgcctttggcc i canFam3.chr5 C 0 I 123 s dasNov3.JH569970 913545 16 + 1009443 C-------------------------------TATAGCAGCAGTCTT----- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=486743.000000 s hg38.chr16_GL383557v1_alt 34885 49 + 89672 taaaacttt------------------------------------------------------------------------ttcagagcacatgtacatcagtaaaaatttgagt-atatgg s panTro5.chr16 21461131 48 - 81586097 taaaagttt------------------------------------------------------------------------ttcagagcacatgtacatcagtaaaaatttgagt-atatg- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527942 48 - 90481686 taaaagttt------------------------------------------------------------------------ttcagagcacatgtacatcagtaaaaatttgagt-atatg- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760802 48 + 3010529 taaaacttt------------------------------------------------------------------------ttcagagcacatgtacatcagtaaaaatttgagt-atatg- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345873 48 - 74971481 TAAAACTTT------------------------------------------------------------------------CTCAAAGCACATGTATATCAGTAAAAATTTGAGT-ATATG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056016 48 - 78541002 taaaacttt------------------------------------------------------------------------ctcaaagcacatgtatatcagtaaaaatttgagt-atatg- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451674 48 + 26466322 TAAAACTTT------------------------------------------------------------------------CTCAAAGCACATGTATATCAGTAAAAATTTGAGT-ATATG- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775741 48 + 43916225 TAAAACTTT------------------------------------------------------------------------CTCAAAGCACATGTATATCAGTAAAAATTTGAGT-ATATG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213621 48 + 75399963 TAAAACTTT------------------------------------------------------------------------CTCAAAGCACACGTATATCAGTAAAAATCTGAGT-ATATG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761212 48 - 7209941 taaaacttt------------------------------------------------------------------------ctcaaagcacatgtatatcagtaaaaatttgagt-atatg- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 512995 48 + 3907144 TAAAACTTT------------------------------------------------------------------------CTCAAAGCACATGTATATCAGTAAAAATTTGAGT-ATATG- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515665 48 - 44557958 TAAAATTTT------------------------------------------------------------------------TTCAGAGTGAGTGTAcatcagtaaaaatttgagt-atata- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6320075 48 + 6628207 TAAAACTTT------------------------------------------------------------------------TTCAGAGTGCATGTGCATCAGTAAAAATTTGAGT-ATAgg- i saiBol1.JH378225 C 0 I 1158 s cebCap1.NW_016107433v1 3304676 48 - 5917169 taaaacttt------------------------------------------------------------------------ttcagagcacatgtacatcagtaaaaatttgagt-atata- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265916 48 - 10531588 taaaacttt------------------------------------------------------------------------ttcagagcacgtgtacatcagtaaaaatttgagt-atata- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920048 45 + 72247402 TAGAACttg---------------------------------------------------------------------------acagtgcacacacatcagtaaaaatttgagt-ataca- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2929654 45 + 9850184 TAAAACttg---------------------------------------------------------------------------acagcacacacacatcagtaaaaatttgagt-atata- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13687873 31 + 13852661 TATAATTTG---------------------------------------------------------------------------ACAGCATACCCA--------------TAAGT-ATATA- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454009 121 + 88915250 taaaactttaaaaaaataaaataaaaaataaaaaaaataaaGCACTTAAATTAGCCTGGGTGGCTCCCATGACTAAAACTTTTGACAGCACACACCCATCAGGCAAAATGTGAATCCTACA- i canFam3.chr5 I 123 C 0 s dasNov3.JH569970 913561 41 + 1009443 TAAAACTTT------------------------------------------------------------------------TG------ATATATCTGTCAGT-AAAATTTAAGC-ATATA- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1616356.000000 s hg38.chr16_GL383557v1_alt 34934 153 + 89672 ccctcaatctatgaatatttattaatgcatatatac--------------------------------------------------------tataaaccatatataaaatacagaaaccaagaaagactgagatacaga-aaaatatataaga-tataaac-ataaCCCAgatgaagtcattatatc------------attagctactatatgactcaaagt s panTro5.chr16 21461179 149 - 81586097 ccctcaatctatgaatatt----aatgcatatatac--------------------------------------------------------tataaaccatatataAAATACAGAAACCAAGAAAGACTGAGATACAGA-AAAATATATAAGA-TATAAAC-ATAACCCAgatgaagtcattatatc------------attagctactatatgacacaaagt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21527990 149 - 90481686 ccctcaatctatgaatatt----aatgcatatatac--------------------------------------------------------tataaaccatatataAAATACAGAAACCAAGAAAGACTGAGATACAGA-AAAATATATAAGA-TATAAAC-ATAACCCAgatgaagtcattatatc------------attagctactatatgacacaaagt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 760850 153 + 3010529 ccctcaatctatgaatatttattaatgcatatatac--------------------------------------------------------tataaaccatatataaaatacagaaaccaagaaagactgagatacaga-aaaatatataaga-tataaac-ataaCCCAgatgaagtcattctatc------------attagctactatatgactcaaagt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21345921 150 - 74971481 CCCTCaatctatgaacatttattaatgaatatatac--------------------------------------------------------tataaaccataaataaaatatataaacCAAGAAAGACTGAGATACAGA-AAAATA---AAGA-TATAAAC-ATAACCCAgatgaagtcatgctatc------------attagctactatatgactcaaagt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056064 150 - 78541002 ccctcaatctatgaacatttattaatgaatatatac--------------------------------------------------------tataaaccataaataaaatatATAAACCAAGAAAGACTGAGATACAGA-AAAATA---AAGA-TATAAAC-ATAACCCAgatgaagtcatgctatc------------attagctactatatgactcaaagt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451722 150 + 26466322 CCCTCaatctatgaacatttattaatgaatatatac--------------------------------------------------------tataaaccataaataaaatatataaacCAAGAAAGACTGAGATACAGA-AAAATA---AAGA-TATAAAC-ATAACCCAgatgaagtcatgctatc------------attagctactatatgactcaaagt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775789 150 + 43916225 CCCTCaatctatgaacatttattaatgaatatatac--------------------------------------------------------tataaaccataaataaaatatataaacCAAGAAAGACTGAGATACAGA-AAAATA---AAGA-TATAAAC-ATAACCCAgatgaagtcatgctatc------------attagctactatatgactcaaagt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213669 150 + 75399963 CCCTCAATCTATGAACATTTATTAATGaatatatac--------------------------------------------------------tataaaccataaataaaatataaaaaccaagaaagactgagatacaga-aaaata---aaga-tataaac-ataACCCAgatgaagtcatgctatc------------attagctactatatgactcaaagt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761260 150 - 7209941 ccctcaatctatgaacatttattaatGAACATATAC--------------------------------------------------------TATAAACCATAAATAAAATATATAAACCAAGAAAGACTGAGATACAGA-AAAATA---AAGA-TATAAAC-ATAACCCAgatgaagtcatgctatc------------attagctactatatgactcaaagt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513043 206 + 3907144 CCCTCAATCTACGAATATTTATTAACAAATATATACTATaaaccatatacaaaaccatatacaaaatatgtataaaccatatacaaaaTTTGTATAAACCATATACAAAATATAGAAACCAAGAAAGACTGAGATACAGA-AAAATA---AAGA-TATAAAC-ATAACCCAgatgaagtcatgctatc------------attggctactatatgactcaaagt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515713 158 - 44557958 ccctcaatctatgaa----tattaatgtgtatataC--------------------------------------------------------TATAAACCATATGTAAAATACAGAAACCAATAAAGACTGAGATACAGA-AAAACA---AAGA-TATAAAC-ATAATCCAGATGAAGTCATTCTATCTAAATGTCATATAGtagctactatatgactcaaagt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3304724 162 - 5917169 tcttcaatctatgaatatttattAACGCATATATAC--------------------------------------------------------TATAAACCATATGTAAAATACAGAAACCAATAAAGACTGAGATACAGA-AAAACA---AAGA-TATAAAC-ATAATCCAGATGAAGTCATTCTATCTAAATGTCATATAGtagctactatatgactcaaagt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9265964 158 - 10531588 tcctcaatctatgaa----tattaatgcatatatac--------------------------------------------------------tataaaccatatgtaAAATACAGAAACCAATGAAGACTGAGATACAGA-AAAACA---AAGA-TAAAAAC-ATAATCCAGATGAAGTCATTCTATCTAAATGTCATATAGtagctactatatgactcaaagt i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920093 149 + 72247402 ccctcaatctatgaatatttattaatgcatatatat--------------------------------------------------------tataaaaaatatacaaagtatagaaatcaagaaagaatgaggtagatataaaata---aaca-CACAAAC---ATtcctgatgaagtcattctatc------------attagctactatatgactcaaagt i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2929699 142 + 9850184 ccctcaatctatgaa----tattaatgtata-------------------------------------------------------------tataaaacatatacaACatatagaaatcaagaaagaatgaggtaaatacaaaata---aata-cataaaC-ATATCCCtgatgaagtcattctatc------------attggctactatatgactcaaagt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13687904 150 + 13852661 CCCTCAACCTATGAATATTTATTAATGCATACATAT--------------------------------------------------------TA-AAAACATATGTAAAATACAGAAATCAAGAAAGAATGAGGTAAAGACAAAATG---AATA-TATAAAC-ACATCCCtgatgaagtaattctatc------------atcagctactatatgacttgaagt i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454130 149 + 88915250 GTCTCAATCTGTGAATATTCATTAATGCatatatat--------------------------------------------------------tattaaatatcaaaaaaatataGGGATCAAG--AGAATGGCATAAAGATTAAATT---AACA-CAATAAC-ATATTCCTCATGAAAtcatactatc------------cttacctactatatggctcaaact i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 913602 140 + 1009443 TCCTCAATCTATGATAATTTATTAATGCATATATCT--------------------------------------------------------TATGTAACAT----AAAATATGGAAATTAAGGA----TGAGATAAAGATTACATA---AATACTCTACACAATATCCCCCATTAAGTC-----ATC------------ATTAACTACTAAATGACTCAAAGT i dasNov3.JH569970 C 0 I 747 e mm10.chr8 22456426 2541 - 129401213 I e saiBol1.JH378225 6320123 1158 + 6628207 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=634747.000000 s hg38.chr16_GL383557v1_alt 35087 56 + 89672 acaatacattcttaaggtgaaattcattatcgatgataatgtgtatatatatccat s panTro5.chr16 21461328 56 - 81586097 acaatacattcttaaggtgaaattcattatcgatgataatgtgtatatatatccat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528139 56 - 90481686 acaatacattcttaaggtgaaattcattatcgatgataatgtgtatatatatccat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761003 56 + 3010529 acactacattcttaaggtgaaattcattatcgatgataatgtgtatatatatccat i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346071 56 - 74971481 acactacattcttaaggtgaagttcattatcgacgataacgtgtatatatatccat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056214 56 - 78541002 acactacattcttaaggtgaagttcattatcgacgataacgtgtatatatatccat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451872 56 + 26466322 acactacattcttaaggtgaagttcattatcgacgataacgtgtatatatatccat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775939 56 + 43916225 acacaacattcttaaggtgaagttcattatcgacgataacgtgtatatatatccat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213819 56 + 75399963 acactacattcttaaggtgaagttcattatcgacgataacgtgtatatatatccat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761410 56 - 7209941 acacaacattcttaaggtgaagttcattatcgacgataacgtgtatatatatccat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513249 56 + 3907144 acactacattcttaaggtgaagttcattatcgatgataacatgtatatatatccat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515871 54 - 44557958 acaatacatccttagggcgaagttcattattgatgataa--tgtgtatatatccat i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3304886 54 - 5917169 acaatacattcttaaggtgaagttcattattgatgataa--tgtatatatatcaac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266122 54 - 10531588 acaatacattcttaaggtgaagttcattattgatgataa--tgtgtatatatccat i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920242 54 + 72247402 acaatatacttttagggtgaagttcattactggtgataa--tgggtgtatatccat i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2929841 54 + 9850184 acaatatagttttagggtgaagttcattagtggtgataa--taggtgtatatccat i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688054 54 + 13852661 acaatatacttttagagtgaagttcattattgatgataa--tgggtgcatatccat i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454279 52 + 88915250 acaatatactcttagggccaaattcattaataataataa----tgtgctaatccac i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914489 54 + 1009443 acaacatactcttaaggtaaagttcattattaatgataa--tgtatataaattcgc i dasNov3.JH569970 I 747 C 0 e mm10.chr8 22456426 2541 - 129401213 I e saiBol1.JH378225 6320123 1158 + 6628207 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1658907.000000 s hg38.chr16_GL383557v1_alt 35143 137 + 89672 atttcaaatagtcttcttgacaatttcattttttaggctgactccttgacaga-tgtaattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcagttctacctttttgttattgtttgcagtgtta s panTro5.chr16 21461384 137 - 81586097 atttcaaatagtcttcttgacaatttcattttttaggctgactccttgacaga-tgtaattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcagttctacttttttgttattgtttgcagtgtta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528195 137 - 90481686 atttcaaatagtcttcttgacaatttcattttttaggctgactccttgacaga-tgtaattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcagttctacctttttgttattgtttgcagtgtta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761059 137 + 3010529 atttcaaatagtcttcttgacaatttcattttttaggctgactccttgacaga-tgtaattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcagttctacctttttgttattgtttgcagtgtta i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346127 135 - 74971481 atttcaa--agtcttcttgacaatttcattttttaggctgactccttgacaga-tataattaccttgaaatgtgacaaagagctcccaccaggaggagaaacgtcggttctacctttttgttattgtttgcagtgtta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056270 135 - 78541002 atttcaa--agtcttcttgacaatttcattttttaggctgactccttgacaga-tataattaccttgaaatgtgacaaagagctcccaccaggaggagaaacgtcggttctacctttttgttattgtttgcagtgtta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14451928 135 + 26466322 atttcaa--agtcttcttgacaatttcattttttaggctgactccttgacaga-tataattaccttgaaatgtgacaaagagctcccaccaggaggagaaacgtcggttctacctttttgttattgtttgcagtgtta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20775995 135 + 43916225 acttcaa--agtcttcttgacaatttcattttttaggctgactccttgacaga-tataattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcggttctacctttttgttattgtttgcagtgtta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58213875 135 + 75399963 atttcaa--agtcttcttgacaatttcattttttaggctgactccttgacaga-tataattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcggttctacctttttgttattgtttgcagtgtta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761466 135 - 7209941 acttcaa--agtcttcttgacaatttcattttttaggctgactccttgacaga-tataattaccttgaaatgtgacaaagagctcccaccaggaggagaaatgtcggttctacctttttgttattgtttgcagtgtta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513305 135 + 3907144 atttcaaatagtcttcttgacaatttcatttcttaggctgactccttgacaga-tataattaccttgaaatgtgacaa--agcccccatcaggaggaaaaatgtcagttctacctttttcttattgtttgcagtgtta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21515925 126 - 44557958 atttcaaatagtcttcttgacaa-ttcattttttaagctgactccttgatagattataattacct-------tgacaaagagctcccatc---gggagaaatgtcagctctaac-attttttaatgtttgcagtgtta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321281 127 + 6628207 attttaaataa---tcttgacaa-ttcattttttaagctgactccttgacagattataattacct-------tgacaaagagctcccaccaggaggagaaatgccagttctaacttttttttaatgtttgcagcgtta i saiBol1.JH378225 I 1158 C 0 s cebCap1.NW_016107433v1 3304940 127 - 5917169 atttcaaatagtcttcttgacaa-ttcattttttaagctgacaacttgacagattataattaCCT-------tgacaaagagctcccacc---aggagaaatgtcagttctaacttttttttaatgtttgcagtgcta i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266176 130 - 10531588 atttcaaatagtctttttgacaa-ttcattttttaagctgactccttgacagattataattacct-------tgacaaagagctcccatcaggaggagaaatatcagttctaacttttttttaatgtttgcagtgtta i aotNan1.NW_018500622v1 C 0 I 323 s micMur3.chr20 54920296 137 + 72247402 atttcaaatagtcttcttgacaatttcgttttttaggatgactttttgacagg-tataattaccttgaaatgtgacaaagagctcccactaggaggagaaatgtcagctctacctttttgttattgtttgcagtgtta i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2929895 137 + 9850184 atttcaaatagtcttcgtgacaatttcattttttaggatgactttttgacagg-tataattaccttgaaatgtgacaaagagctcccattaggagaagaaatgtcagctctacctttttgttattgttttcagtgtta i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688108 136 + 13852661 atttcaaatcattttctcgacaatttcatttttcaggctgacttcttgacaga-cataattaccttgaaatgtgacaaaaagttcccactagcaggaaaaatgtca-ctctacctttttgttattgtttgcagggtta i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454331 130 + 88915250 atttcaaatagtgttcttggtaatttcactttttaggctgactttttgacaga-gaagattaccttaaaatgtgacaaactgctcctact---agaagaaatgtcagctttacctttttgttattgtttgtaat---- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914543 51 + 1009443 ctttcagatag---tctcaacaatttcactgtttaggctgaattcttgacaga-t----------------------------------------------------------------------------------- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=133775.000000 s hg38.chr16_GL383557v1_alt 35280 15 + 89672 cagttatctttaatc s panTro5.chr16 21461521 15 - 81586097 cagttatctttaatc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528332 15 - 90481686 cagttatctttaatc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761196 15 + 3010529 caattatctttaatc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346262 15 - 74971481 aaattatctctaatc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056405 15 - 78541002 aaattatctctaatc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452063 15 + 26466322 aaattatctctaatc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776130 15 + 43916225 aaattatctctaatc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214010 15 + 75399963 aaattatctctaatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761601 15 - 7209941 aaattatctctaatc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513440 15 + 3907144 aaattatctttaatc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516051 15 - 44557958 gaattttcttcagtg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321408 15 + 6628207 gaattttcttcagtg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305067 15 - 5917169 gaattttcttcagtg i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54920433 15 + 72247402 gaattgtcttcaatc i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2930032 15 + 9850184 gaattgtcttcaatc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688244 15 + 13852661 gaattgtcttcaatc i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454461 14 + 88915250 -aattaccttcaatt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914594 10 + 1009443 ----TACctgtagt- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e aotNan1.NW_018500622v1 9266306 323 - 10531588 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=336649.000000 s hg38.chr16_GL383557v1_alt 35295 24 + 89672 tactatttctttgagcaaatctct s panTro5.chr16 21461536 24 - 81586097 tactatttctttgagcaaatctct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528347 24 - 90481686 tactatttctttgagcaaatctct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761211 24 + 3010529 tactatttctttgagcaaatctct i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346277 24 - 74971481 tactatttctttgtgcaaatctct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056420 24 - 78541002 tactatttctttgtgcaaatctct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452078 24 + 26466322 tactatttctttgtgcaaatctct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776145 24 + 43916225 tactatttctttgtgcaaatctct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214025 24 + 75399963 tactatttcttcgtgcaaatctct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761616 24 - 7209941 tactatttctttgtgcagatctct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513455 24 + 3907144 tactatttctttgtgcaaatctct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516066 24 - 44557958 tactatttctttgtgcaaatctct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321423 24 + 6628207 tactatttctttgtgtaaatctct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305082 24 - 5917169 tactatttctttgtgcaaatctct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266629 24 - 10531588 tactatttctttgtgcaaatctct i aotNan1.NW_018500622v1 I 323 C 0 s micMur3.chr20 54920448 24 + 72247402 tatggtttctttgtgcatatcttt i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2930047 24 + 9850184 tctggcttctttgtgcatatcttt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688259 24 + 13852661 tatggtttctttgtgcaaatcttt i otoGar3.GL873566 C 0 I 118 s canFam3.chr5 80454475 24 + 88915250 catggtttctttgtgcaaatcttt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914604 19 + 1009443 -----ttcttttgtgcaaatcttt i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=295922.000000 s hg38.chr16_GL383557v1_alt 35319 20 + 89672 aagcc-acttgttcattttgt s panTro5.chr16 21461560 20 - 81586097 aagcc-acttgttcattttgt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528371 20 - 90481686 aagcc-acttgttcattttgt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761235 20 + 3010529 aagcc-acttgttcattttgt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346301 20 - 74971481 aagcc-acttgttcattttgt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056444 20 - 78541002 aagcc-acttgttcattttgt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452102 20 + 26466322 aagcc-acttgttcattttgt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776169 20 + 43916225 aagcc-acttgttcattttgt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214049 20 + 75399963 aagcc-acttgttcattttgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761640 20 - 7209941 aagcc-acttgttcattttgt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513479 20 + 3907144 aagcc-acttgttcattttgt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516090 20 - 44557958 aagcc-acttgttcattttgt i calJac3.chr20 C 0 I 317 s saiBol1.JH378225 6321447 20 + 6628207 aagcc-acttgttccttttgt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305106 20 - 5917169 aagcc-acttgttcattttgt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266653 20 - 10531588 aagcc-acttgttcattttgt i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920472 17 + 72247402 aagcc-ac---ttcactttgc i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2930071 17 + 9850184 aagcc-ac---ttcattttgt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688401 20 + 13852661 aagcc-acttgttcatttcat i otoGar3.GL873566 I 118 C 0 s canFam3.chr5 80454499 21 + 88915250 aagccaacttgtttattttgt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914623 19 + 1009443 aagcc-acttgttca-tttgt i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=129882.000000 s hg38.chr16_GL383557v1_alt 35339 9 + 89672 gaagattaa s panTro5.chr16 21461580 9 - 81586097 gaagattaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528391 9 - 90481686 gaagattaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761255 9 + 3010529 gaagattaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346321 9 - 74971481 gaagattaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056464 9 - 78541002 gaagattaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452122 9 + 26466322 gaagattaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776189 9 + 43916225 gaagattaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214069 9 + 75399963 gaagattaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761660 9 - 7209941 gaagattaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513499 9 + 3907144 gaagattaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516427 9 - 44557958 gaaaattaa i calJac3.chr20 I 317 C 0 s saiBol1.JH378225 6321467 9 + 6628207 gaaaattaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305126 9 - 5917169 gaaaattaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266673 9 - 10531588 gaaaattaa i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920489 6 + 72247402 gaagat--- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2930088 9 + 9850184 gaagattaa i proCoq1.NW_012152729v1 C 0 I 97 s otoGar3.GL873566 13688421 9 + 13852661 gcagattaa i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454520 9 + 88915250 gaagactaa i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914642 9 + 1009443 gaagattaa i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=759324.000000 s hg38.chr16_GL383557v1_alt 35348 67 + 89672 tgtaattaaatgcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattc s panTro5.chr16 21461589 67 - 81586097 tgtaattaaatgcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528400 67 - 90481686 tgtaattaaatgcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761264 67 + 3010529 tgtaattaaatgcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346330 67 - 74971481 tgtaattaaaagcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcgttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056473 67 - 78541002 tgtaattaaaagcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452131 67 + 26466322 tgtaattaaaagcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776198 67 + 43916225 tgtaattaaaagcagata-----acataa-----atccactcaaccaggctcaagtaaaccgcaataagttgcattc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214078 67 + 75399963 tgtaattaaaagcagata-----atataa-----atccactcaaccaggctcaagtaaactgcaataagttgcattt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761669 67 - 7209941 tgtaattaaaagcagata-----acataa-----atccactcaaccaggctcaagtaaaccacaataagttgcattc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513508 67 + 3907144 tgtaattaaaagcagata-----atataa-----atccactcaaccaggctcaagtaaactaaaataagctgcattc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516436 66 - 44557958 tgtaactaaaagaa-ata-----atataa-----atccactcaaccaggctcaagtaaactgcaacaagttgcattc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321476 66 + 6628207 tataactaaaagaagata-----atataa-----atccactcaaccaggctcaagtaaactgcaacaagttgca-tc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305135 67 - 5917169 tgtaactaaaaaaagata-----atataa-----atccactcaaccaggctcaagtaaactgcaacaagtagcattc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266682 64 - 10531588 tgtaactaaaagaa---a-----atacaa-----atccactcaatcaggctcaagtaaactgcaacaagttgcattc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54920495 64 + 72247402 --gaactcaaagcagaca-----atataa-----at-cgctcaaccagtctcaagtaagctgcactaagttgcattc i micMur3.chr20 C 0 I 475 s otoGar3.GL873566 13688430 52 + 13852661 -----ttcaaagcaaataacattacataa-----at-ctctcacctagactcaaggaaggcgc-------------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454529 72 + 88915250 tttagttaaaatcacaca-----atataatgtatatccactcaaccaggctcaagtaaactacagtaagtcacaata i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914651 72 + 1009443 tttaattaaaagcatata-----acataccatacatccactcaaccaagctcaagtaaactgaaataaattacaata i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2930097 97 + 9850184 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=129679.000000 s hg38.chr16_GL383557v1_alt 35415 13 + 89672 tgataacggcagc s panTro5.chr16 21461656 13 - 81586097 tgataacggcagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528467 13 - 90481686 tgataacggcagc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761331 13 + 3010529 tgataacggcagc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346397 13 - 74971481 tgataacagcagc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056540 13 - 78541002 tgataacagcagc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452198 13 + 26466322 tgataacagcagc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776265 13 + 43916225 tgataacagcagc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214145 13 + 75399963 tgataacagcagc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761736 13 - 7209941 tgataacagcagc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513575 13 + 3907144 tgataacagcagc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516502 13 - 44557958 tggtaacagcaac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321542 13 + 6628207 tggtaacagcagc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305202 13 - 5917169 tggtaacagcagc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266746 13 - 10531588 tggtaacagcagc i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80454601 13 + 88915250 tgataatagcagt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914723 7 + 1009443 tgataat------ i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2930097 97 + 9850184 I e otoGar3.GL873566 13688482 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=872771.000000 s hg38.chr16_GL383557v1_alt 35428 99 + 89672 caaactagtaaggtcaccactgtcaattccttggctttatgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactccaacagtcata s panTro5.chr16 21461669 99 - 81586097 caaactagtaaggtcaccactgtcaattccttggctttatgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactccaacagtcata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528480 99 - 90481686 caaactagtaaggtcaccactgtcaattccttggctttatgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactccaacagtcata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761344 99 + 3010529 caaactagtaaggtcaccactgtcaattccttggctttatgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactccaacagtcata i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346410 99 - 74971481 caaactagtaaggacaccactgtcagttcctcagctttgtgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactctaacaatcata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056553 99 - 78541002 caaactagtaaggacaccactgtcagttcctcagctttgtgaagcttctgttcctGTCACTTTGCTGAAATTGCTCTTATGAAGACTCTAACAATCATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452211 99 + 26466322 caaactagtaaggacaccactgtcagttcctcagctttgtgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactctaacaatcata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776278 99 + 43916225 caaactagtaaggacactactgtcagttcctcagctttgtgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactctaacaatcata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214158 99 + 75399963 caaactagtaaggacaccactgtcagttcctcagctttgtgaagcttctgttcctGTCACTTTGCTGAAATTGCTCTTATGAAGACTCTAACAATCATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761749 99 - 7209941 caaactagtaaggacaccactgtcagttcctcagctttgtgaagcttctgttcctgtcactttgctgaaattgctcttatgaagactctaacaatcata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513588 99 + 3907144 caaactagtaaggacaccactgtcaattcctcagctttgtgaagcttccgttcctgtcactttgctgaaattgctcttatgaagactctaacaatcata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516515 98 - 44557958 caaactaataaggtcaccactgtcaactgctcggctttgtgaagcttctgtt-ctgtcacttggctgaaattgctcttatgaaggctccaacaatcata i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321555 98 + 6628207 caaactagtaaggtcaccactgtcaattcctcggctttgtgaagcttctgtt-ctatcactctgatgaaattgcttttatgaaggctccaatgatcata i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305215 98 - 5917169 caaactggtaaggtcaccactgtcaattcctcggctttgtgaagcttctgtt-ctGTCACTTTGCTGAAATTGCTCTTATGAAGGCTCCAACGATCATA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266759 98 - 10531588 caaactagtaaggtcaccactgtcaattcctcagctttgtgaagcttctgtt-gtgtcactttgctgaaattgctcttatgaaggctccaacgatcata i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13688482 36 + 13852661 -------------------------attcctctgctttgtgaagactgcact-------ctttccttg------------------------------- i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 914730 56 + 1009443 -----tggtaaggtcaccaccatcaacccctctgctttgtgaagcttccact-------ctcccctca------------------------------- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80454614 0 + 88915250 C e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e proCoq1.NW_012152729v1 2930097 97 + 9850184 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=440373.000000 s hg38.chr16_GL383557v1_alt 35527 43 + 89672 agacatcagcttgtatatcgagtatgtaa---tggcactgtcttaa s panTro5.chr16 21461768 43 - 81586097 agacatcagcttgtatatccagtatgtaa---tggcactgtcttaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528579 43 - 90481686 agacatcagcttgtatatccagtatgtaa---tggcactgtcttaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761443 43 + 3010529 agacatcagcttgtatatcgagtatgtaa---tggcactgtcttaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346509 43 - 74971481 aggcatcagcttgtatatcgagtgtgtaa---cggcaccatcttat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21056652 43 - 78541002 AGGCATCAGCTTGTATATCGAGTGTGTAA---CGGCACCATCTTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452310 43 + 26466322 aggcatcagcttgtatatcgagtgtgtaa---cggcaccatcttat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776377 43 + 43916225 aggcatcagcttgtatatcgagtgtgtaa---cggcaccatcttat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214257 39 + 75399963 AGGCATCAGCTTGTATATCGA----GTAA---CGGCACCATCTTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761848 43 - 7209941 aggcatcagcttgtatatcgagtgtgtaa---cggcaccatcttat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513687 43 + 3907144 aggcatcagcttgtatatccagtgtgtaa---cggcaccgtcttac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516613 43 - 44557958 agacatcagtttgtatatcaagtgtggaa---tggcaccatcttat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321653 43 + 6628207 agacatcagcttgtatatcaagtatgtaa---tggcaccatcttat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305313 43 - 5917169 AGACATCAGCTTGTATATAAAGTGTGTAA---TGGCACCATCTTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266857 43 - 10531588 agacatcagcttctatatcaagtgtgtaa---tggcaccatcttat i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2930194 43 + 9850184 agacatcatcttgtatatcgagtgtgtaa---tggtaccatcttat i proCoq1.NW_012152729v1 I 97 C 0 s otoGar3.GL873566 13688518 39 + 13852661 ggacatgatctt-------gagtgtgtaatactggtgtcctcttat i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 914786 43 + 1009443 ggacatcaccttgtactatgaatgtgtcc---cagcaccatcttac i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80454614 0 + 88915250 C e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=458767.000000 s hg38.chr16_GL383557v1_alt 35570 36 + 89672 -aagact----aagagaaccagtgttaccta-tatattaaat s panTro5.chr16 21461811 36 - 81586097 -aagact----aagagaaccagtgttatcta-tatattaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528622 36 - 90481686 -aagact----aagagaaccagtgttatcta-tatattaaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761486 36 + 3010529 -aagact----aacagaaccagtgttatcta-tatattaaat i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346552 36 - 74971481 -aagact----aagagaaccagtgttatcta-tatattaaat i rheMac8.chr20 C 0 I 332 s macFas5.chr20 21056695 36 - 78541002 -AAGACT----AAGAGAACCAGTGTTATCTA-TATATTAAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14452353 37 + 26466322 -aagacg----aagagaaccagtgttatctactatattaaat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776420 36 + 43916225 -aagact----aagagaaccagtgttatcta-tatattaaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214296 36 + 75399963 -AAgact----aagagaaccagtgttatcta-tatattaaat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761891 36 - 7209941 -aagact----aagagaaccagtgttatcta-tatattaaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513730 36 + 3907144 -aagact----aagagaaccagtgttatcta-tatattaaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516656 40 - 44557958 -aagactgagcaagagaaccagtgttatcta-tatattaaat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321696 40 + 6628207 -aagactgagcaagagaaccagtgttatcta-tatattaaat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305356 40 - 5917169 -AAGACTGAGCAAGAGAACCAGTGTTATCTA-TACATTAAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266900 40 - 10531588 -aagactgagcaagagaacgagtgttatcta-tatattaaat i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2930237 36 + 9850184 -aagact----gagagaaccagtgttatcta-ttcattaaat i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688557 36 + 13852661 -aatact----gagagaaccagggctatcca-cacattaaat i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454614 36 + 88915250 -aagact----gaaagaaccagtgtcacccA-TATATTAACT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914829 37 + 1009443 acagaat----gagagaagcagaattaacta-tatattaaat i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=71757.000000 s hg38.chr16_GL383557v1_alt 35606 5 + 89672 attaa s panTro5.chr16 21461847 5 - 81586097 attaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528658 5 - 90481686 attaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761522 5 + 3010529 attaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346920 5 - 74971481 attaa i rheMac8.chr20 I 332 C 0 s macFas5.chr20 21056731 5 - 78541002 ATTAA i macFas5.chr20 C 0 I 325 s macNem1.NW_012011355v1 14452390 5 + 26466322 attaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776456 5 + 43916225 attaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214332 5 + 75399963 attaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761927 5 - 7209941 attaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513766 5 + 3907144 attaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516696 5 - 44557958 attaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321736 5 + 6628207 attaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305396 5 - 5917169 ATTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266940 5 - 10531588 atcaa i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2930273 5 + 9850184 attaa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688593 5 + 13852661 attta i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454650 5 + 88915250 ATTAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914866 5 + 1009443 attaa i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=31122.000000 s hg38.chr16_GL383557v1_alt 35611 2 + 89672 ta s panTro5.chr16 21461852 2 - 81586097 ta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528663 2 - 90481686 ta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761527 2 + 3010529 ta i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346925 2 - 74971481 ta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057061 2 - 78541002 TA i macFas5.chr20 I 325 C 0 s macNem1.NW_012011355v1 14452395 2 + 26466322 ta i macNem1.NW_012011355v1 C 0 I 616 s cerAty1.NW_011999143v1 20776461 2 + 43916225 ta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214337 2 + 75399963 ta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761932 2 - 7209941 ta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513771 2 + 3907144 ta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516701 2 - 44557958 ta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321741 2 + 6628207 ta i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305401 2 - 5917169 TA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266945 2 - 10531588 ta i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2930278 2 + 9850184 ta i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688598 2 + 13852661 ta i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454655 2 + 88915250 TA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 914871 2 + 1009443 ta i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=99706.000000 s hg38.chr16_GL383557v1_alt 35613 8 + 89672 aagctcaa s panTro5.chr16 21461854 8 - 81586097 aagctcaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528665 8 - 90481686 aagctcaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761529 8 + 3010529 aagctcaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346927 8 - 74971481 aagctcaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057063 8 - 78541002 AAGCTCAA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20776463 8 + 43916225 aagctcaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214339 8 + 75399963 aagctcaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761934 8 - 7209941 aagctcaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513773 8 + 3907144 aagctcaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516703 8 - 44557958 aagctcta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321743 8 + 6628207 aagctcta i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305403 8 - 5917169 AAGCTCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266947 8 - 10531588 aagctcta i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2930280 8 + 9850184 aagctcaa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688600 8 + 13852661 aagctcaa i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80454657 8 + 88915250 AAGCTCAA i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 914873 8 + 1009443 aacctcaa i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e macNem1.NW_012011355v1 14452397 616 + 26466322 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=11849.000000 s hg38.chr16_GL383557v1_alt 35621 1 + 89672 t s panTro5.chr16 21461862 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528673 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761537 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346935 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057071 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453013 1 + 26466322 t i macNem1.NW_012011355v1 I 616 C 0 s cerAty1.NW_011999143v1 20776471 1 + 43916225 t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214347 1 + 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761942 1 - 7209941 t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513781 1 + 3907144 t i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516711 1 - 44557958 t i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321751 1 + 6628207 t i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305411 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266955 1 - 10531588 t i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2930288 1 + 9850184 t i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688608 1 + 13852661 t i otoGar3.GL873566 C 0 I 9 s dasNov3.JH569970 914881 1 + 1009443 c i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80454665 1 + 88915250 I e micMur3.chr20 54920559 475 + 72247402 I e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=2251129.000000 s hg38.chr16_GL383557v1_alt 35622 175 + 89672 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACATACAAGGCTCTCGATGA--CCTGGC----CTCTGCCC--ACCTTTCCAGACTGCTCTTCTGGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAACCTGCTACTTATC s panTro5.chr16 21461863 175 - 81586097 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACATACAAGGCTCTCGATGA--CCTGGG----CTCTGCCC--ACCTTTCCAGACTGCTCTTCTGGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAACCTGCTACTTATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528674 175 - 90481686 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACATACAAGGCTCTCGATGA--CCTGGC----CTCTGCCC--ACCTTTCCAGACTGCTCTTCTGGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAACCTGCTACTTATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761538 174 + 3010529 --ttc-tt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACATACAAGGCTCTCGATGA--ACTGGC----CTCTGCCC--ACCTTTCCAGACTGCTCTTCTGGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAACCTGCTACTTATC i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21346936 175 - 74971481 --ttcttt-ttttcaaggtgaaaaagtaaatataaaCCTCATTTAGAGACAATCGCTTAGCACTACGTACAAGGCTCTCGATAA--CCTGGC----CTTTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAATCTGCTACTTATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057072 175 - 78541002 --TTCTTT-TTTTCAAGGTGAAAAAGTAAATATAAACCTCATTTAGAGACAATCGCTTAGCACTACGTACAAGGCTCTCGATAA--CCTGGC----CTTTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAATCTGCTACTTATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453014 175 + 26466322 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACGTACAAGGCTCTCGATAA--CCTGGC----CTTTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAATCTGCTACTTATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776472 172 + 43916225 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACGTACAAGGCTCTCGATAA--CCTGGC----CTTTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAAT---CTACTCATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214348 175 + 75399963 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACATACAAGGCTCTTGATAA--CCTGGC----CTTTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCTTGTACCTT-ACCACACT---TTACTTCTCTCAACAAATCTGCTACTTATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6761943 172 - 7209941 --ttcttt-ttttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACTACGTACAAGGCTCTCGATAA--CCTGGC----CTTTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAACAAAT---CTACTCATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513782 175 + 3907144 --ttcttt-ttttcaagttgaaaaagtaaatataaaCTTCATTTAGAGACAATTGCTTAGCACTACATTCAAGGCTCTCGATGA--CCTGGC----CTCTGCCC--ACCTTTCCAGACTGCTCTCCTAGC-A--CACACTTCCTGTACCTT-ACCACACT---CTACTTCTCTCAACAAATCTGCTACTTATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516712 176 - 44557958 --tcctttattttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACCACATACAAGGTTCTCGAAGA--CCTGGC----CTCTGCCC--ACCTTTCCAGCCTGCTCTCCTGAT-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAAAATACCAGCTACTTATC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6321752 177 + 6628207 --tcctttattttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCATCACATACGAGTCTCTTGAAGA--CCTGGC----CTCTGCCC--ACCTTTCCAGCCTGCTCTCCTGACAA--TACACTTCCTATACCTT-ATCACACT---TTACTTCTCTCAAAAAACCAGCTACTTATC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305412 176 - 5917169 --TCCTTTATTTTCAAGTTGAAAAAGTAAATATAAACCTCATTTAGAGACAATTGCTTAGCACCACATACAAGGCTCTCAAAGA--CCTGGC----CTCTGCAC--ACCTTTCCAGCCTGCTCTCCAGAC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAAAAAACCAGCTACTTATC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9266956 176 - 10531588 --tcctttattttcaagttgaaaaagtaaatataaaCCTCATTTAGAGACAATTGCTTAGCACCACATACAAGGCTCTCGAAGA--CCTGGC----CTCTGTCC--ACCTTTCCAGCCTGCTCTCCTGAC-A--CACACTTCCTGTACCTT-ACCACACT---TTACTTCTCTCAAAAAACCAGCTACTTATC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54921034 161 + 72247402 --ttcttt-ttttcaagttgaaaaagtaaat---aAACACATTCAGAGACCATTGCTTAGCACTACATACAAGGCGC-TGACGA--TCTGGC----TTCTGCCC--ATCTTTCCGGCCTGCT------------GACA-CTTTTGTGCCTT-ACCACATT---TCACTTCTCTCAACACAGCAGCTACTTATC i micMur3.chr20 I 475 C 0 s proCoq1.NW_012152729v1 2930289 169 + 9850184 --ttcttt-ttttcaagttgaaaaagtaaatataaaACACATTCAGAGACCATTGCTTAGCACTACATACAAGGCCC-TGGCGA--TCTGGCTTCTTTCTGCCC--ATCTTTCCAGTCTGCT------------CGCACCTCCCGTGCCTT-ACCACGTT---TCACTTCTCTCAACAGGGCAGCTATTTATC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688618 176 + 13852661 --tttttt-ttttcaagttaaaagaataaatataaaATACATTTAGAGAGCACTGCATAGCACTTTGTATAAGGCCCTTGATAA--CCTGGC----TCCCACCC--ACCTTCTCAGCCAGCTCTCCTGAC-ACACACACTTCCTGTGCCTT-ATCACACT---T-GGTTCTCTCAGCACAGCAGCTGTTTATC i otoGar3.GL873566 I 9 C 0 s canFam3.chr5 80454666 173 + 88915250 ---TTCTT-TTTTCAGGTTGAAA-AGTAAAAATAGACCCCACTTAAAGATGACTGCTT-GCACTGCCTACAAGGCCCTTGATGATCTCTGGC----CTCTGCCC--ACCTTCCCAGCATACT-TTTGGGT-A--CACATTTCCTATAACTT-ACCATGAT---TAACTTCTCTCAACACACCAACTACTTGTC i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 914882 182 + 1009443 ttgtgttt-ctttcagattaaataaataaatataaaCCGCACTTAAAGACCTTTGCTTGGCATTGCACAC-AGGCCctttgtga--tctggc----ccaagctcatacatttccagcctgctctcctggt-a--tacacttcctatactttaaccatcctgaattacttctctcaacacaccagttaattatc i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22456426 2541 - 129401213 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=180774.000000 s hg38.chr16_GL383557v1_alt 35797 14 + 89672 ATTTTCTTACCTTC s panTro5.chr16 21462038 14 - 81586097 ATTTTCTTACCTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528849 14 - 90481686 ATTTTCTTACCTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761712 14 + 3010529 ATTTTCTTACCTTC i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347111 14 - 74971481 ACTTTCTTACCTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057247 14 - 78541002 ACTTTCTTACCTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453189 14 + 26466322 ACTTTCTTACCTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776644 14 + 43916225 ACTTTCTTACCTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214523 14 + 75399963 ACTTTCTTACCTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762115 14 - 7209941 ACTTTCTTACCTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513957 14 + 3907144 CCTTTCTTACCTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21516888 14 - 44557958 ACtttctttttttc i calJac3.chr20 C 0 I 477 s saiBol1.JH378225 6321929 11 + 6628207 ACTTTACCTTC--- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305588 14 - 5917169 ACTTTCTTACCTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267132 14 - 10531588 ACTTTCTTACCTTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54921195 14 + 72247402 ACTGTCTTACCTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2930458 14 + 9850184 ACCGTCTTACCTTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13688794 14 + 13852661 ATCTTCTTACCTTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22458967 14 - 129401213 ACTTTCTTACCATC i mm10.chr8 I 2541 C 0 s canFam3.chr5 80454839 13 + 88915250 ACTTTCTTACCTT- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 915064 14 + 1009443 acttttttaccttt i dasNov3.JH569970 C 0 C 0 e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1774866.000000 s hg38.chr16_GL383557v1_alt 35811 136 + 89672 GACATGCTGTCTCCTTTACACTCCTACC------T-C------CAGTGCCCTGTGT--TCTCACCTCTATTAAAGCG----TGTATCACAACCTGCAATAA-CTG-TTCCTTACTAGCCTAAAAGGGCAGG-ATTACTCCCAATTTGGAATTCCCAGC s panTro5.chr16 21462052 137 - 81586097 GACATGCTGTCTCCTTTACACTCCTACC------T-C------CAGTGCCCTGTGT--TCTCACCTCTATTAAAGCG----TCTATCACAACCTGCAATAA-CTG-TTCCTTACTAGCCTAAAagggcagggattactcccaatttggaattcccagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21528863 137 - 90481686 GACATGCTGTCTCCTTTACACTCCTACC------T-C------CAGTGCCCTGTGT--TCTCACCTCTATTAAAGCG----TCTATCACAACCTGCAATAA-CTG-TTCCTTACTAGCCTAAAagggcagggattactcccaatttggaattcccagc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761726 137 + 3010529 GACATGCTGTctcctttgcactcctacc------t-c------cagtgccctgtgt--tctcacctctattaaagcg----tctatcacaacctgcaataa-ctg-ttccttactagcctaaaagggcagggattactcccaatttggaattcccagc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347125 138 - 74971481 GACATGCTGTCTCCTTTGCACTCCTACC------T-C------CAGCGCCCTGTGT--TCTCACCTCTATTAAAGCG----TCTATCACAACCTGCAATAA-CTGTTTCCTTACTAGCCTAAAagggcagggattactcccaatttggaattcccagc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057261 138 - 78541002 GACATGCTGTCTCCTTTGCACTCCTACC------T-C------CAGCGCCCTGTGT--TCTCACCTCTATTAAAGCG----TCTATCACAACCTGCAATAA-CTGTTTCCTTACTAGCCTAAAAGGGCAGGGATTACTCCCAATTTGGAAttcccagc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453203 138 + 26466322 GACATGCTGTctcctttgcactcctacc------t-c------cagcgccctgtgt--tctcacctctattaaagcg----tctatcacaacctgcaataa-ctgtttccttactagcctaaaagggcagggattactcccaatttggaattcccagc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776658 138 + 43916225 GACATGCTGTctcctttgcactcctacc------t-c------cagcgccctgtgt--tctcacctctattaaagcg----tctatcacaacctgcaataa-ctgtttccttactagcctaaaagggcagggattactcccaatttggaattcccagc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214537 138 + 75399963 GACATGCTGTCTCCTTTGCACTCCTACC------T-C------CAGCGCCCTGTGT--TCTCACCTCTATTAAAGCG----TCTATCACAACCTGCAATAA-CTGTTTCCTTACTAGCCTAAAAGGGCAGGGATTACTCCCAATTTGGAAttcccggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762129 138 - 7209941 GACATGCTGTctcctttgcactcctacc------t-c------cagcgccctgtgt--tctcacctctattaaagcg----tctatcacaacctgcaataa-ctgtttccttactagcctaaaggggcagggattactcccaatttggaattcccagc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 513971 138 + 3907144 GACATGCTGTCTCCTTTGCACTTCTACC------T-C------CAGCGCCCTGTGT--TCTCACCTCTATTAAAGCG----TCTATCACAACCTGCAATAA-CTGTTTCCTTACTAGCCTAAAagggcagggattactcccaatttggaattcccagc i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6321940 132 + 6628207 AACATGCTG--TCCTTTGCACTCCTAAC------T-C------CAACACCCTGTGT--TCTCACCTCTATTAAAGCC----TCTATCACAACCTGCAATAA-CTGTTCCCTTACTAGCCTAAAA----AGAGATTACTCCCAACTTGGAATTGccagc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305602 132 - 5917169 AACATGCTG--TCCTTTGCACTCCTACC------T-C------CAACACCCTGTGT--TCTCACCTCTATTAAAGCC----TCTATCACAACCTGCAATAA-CTGTTTCCTTACTAGCCTAAAA----AGAGATTACTCCCAACTTGGAATTGccagc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267146 136 - 10531588 AACATGCTG--TCCTTTGCACTCCTACC------T-C------CAACACCCTGTGT--TCTCACCTCTATTAAAGCC----TCTATCACAACCTGCAATAA-CTGTTTCCTTACTAGCCTAAAAGGGCAGAGATTACTCCCAACTTGGAACTGccagc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54921209 142 + 72247402 GACACGCTGTCTCCTTGGCACTTCTACC------T-C------CAGTGCCCTGTGT--TCTCACCTCTATTAAAGCACACCTTTATCACAACCTGCAATAACCCATTTCCTTACTGGcctaaa-gggcagggattactcccaatttggaattctcagc i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2930472 141 + 9850184 GACATGTTGTctcctttgcacttctatc------t-c------cagtgccctgcgt--tctcacctctattaaagcacacctttatcacaacctgcagtaa-ctgtttccttactagcctaaa-gggcagggattactcccaatttggaattctcagc i proCoq1.NW_012152729v1 C 0 I 867 s otoGar3.GL873566 13688808 139 + 13852661 GAC-TGCTGTCTCCTTTGCACTTCTACC------T-C------CAGTGCTCTGTGT--TCTCACCTCTATTAAAGCACACCTTTATT-CAACCTGCAATAA-CTGTTTCCTTACTGGCCTAAA-GGGCAGGGATTACTTCCAATTTGGAATTTCTAGC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22458981 136 - 129401213 -AC-CATTGTCTCCTTTAAACATCTATC------TAC------CTGTTTCCAGGGCAGTCTCACCTCTATGAAAGTA----TTTACCACAATAGGCTATAA-TTGTTCC--TACTAGCCTAAA-GGGTAGGGATCACTTCCAATTTGGAATTCCCAGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80454852 129 + 88915250 GATGTACTATCTCCTTTGCACTTCTATCACTGTTT-C------AAGTgcaccatgt--tctcacctcttttaaagca----tttatcacaacctattataa-ctgtttccttactagcctaaa-gggcaaggattactcccaat-------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 915078 128 + 1009443 gacatgttctatcctttgctcttctacc------t-ctgcttacaggtaacaatga--tctcacctttcttaaaggt----cttagcacaacatgccaTAA-GTATTTCCTTGCTAACCTA----------------TGTCAACTCTGACTTCTAAGC i dasNov3.JH569970 C 0 C 0 e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=54977.000000 s hg38.chr16_GL383557v1_alt 35947 4 + 89672 ATCT s panTro5.chr16 21462189 4 - 81586097 atct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529000 4 - 90481686 atct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761863 4 + 3010529 atct i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347263 4 - 74971481 atct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057399 4 - 78541002 atct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453341 4 + 26466322 atct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776796 4 + 43916225 atct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214675 4 + 75399963 atct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762267 4 - 7209941 atct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514109 4 + 3907144 atct i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6322072 4 + 6628207 atct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305734 4 - 5917169 atct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267282 4 - 10531588 atct i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54921351 4 + 72247402 gtct i micMur3.chr20 C 0 I 874 s otoGar3.GL873566 13688947 4 + 13852661 ATCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459117 4 - 129401213 ACCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80454981 3 + 88915250 -ttt i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 915206 4 + 1009443 ATCT i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=10920.000000 s hg38.chr16_GL383557v1_alt 35951 1 + 89672 A s panTro5.chr16 21462193 1 - 81586097 a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529004 1 - 90481686 a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761867 1 + 3010529 a i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347267 1 - 74971481 a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057403 1 - 78541002 a i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453345 1 + 26466322 a i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776800 1 + 43916225 a i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214679 1 + 75399963 a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762271 1 - 7209941 a i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514113 1 + 3907144 a i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6322076 1 + 6628207 a i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305738 1 - 5917169 a i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267286 1 - 10531588 a i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80454985 1 + 88915250 a i canFam3.chr5 I 1 I 39 s dasNov3.JH569970 915210 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459121 0 - 129401213 C e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e calJac3.chr20 21516902 477 - 44557958 I e otoGar3.GL873566 13688951 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=259421.000000 s hg38.chr16_GL383557v1_alt 35952 26 + 89672 CCACAACACT---TTTGCAGC-AGGTACTT s panTro5.chr16 21462194 26 - 81586097 ccacaacact---tttgcagc-aggtactt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529005 26 - 90481686 ccacaacact---tttgcagc-aggtactt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761868 26 + 3010529 ccacaacact---tttgcagc-aggtactt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347268 29 - 74971481 ccacaacactttgtttgcagt-aggtactt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057404 29 - 78541002 ccacaacactttgtttgcagt-aggtactt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453346 29 + 26466322 ccacaacactttgtttgcagt-aggtactt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776801 29 + 43916225 ccacaacactttgtttgcagt-aggtactt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214680 29 + 75399963 ccacaacactttgtttgcagt-aggtactt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762272 29 - 7209941 ccacaacactttgtttgcagt-aggtactt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514114 29 + 3907144 ccacaacactttgtttgcagt-aggtactt i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6322077 29 + 6628207 ccacgacactttgtttgcagt-aggtactt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305739 29 - 5917169 ccacaacactttgtttgcagt-aggtactt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267287 29 - 10531588 ccacaacactttgtttgcagt-aggtactt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13688951 28 + 13852661 --ATAACACCTTGTTTGCAGTCAACTACTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459121 22 - 129401213 -------AGCTTGTTTGCTAT-GCGTGCCT i mm10.chr8 C 0 C 0 s dasNov3.JH569970 915211 26 + 1009443 ---CAACAATTTGTTTGCAGT-AGGTACTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=76849.000000 s hg38.chr16_GL383557v1_alt 35978 11 + 89672 AATAAATGTTG s panTro5.chr16 21462220 11 - 81586097 aataaatgttg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529031 11 - 90481686 aataaatgttg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761894 10 + 3010529 aataaatgtt- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347297 11 - 74971481 aataaatgttg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057433 11 - 78541002 aataaatgttg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453375 11 + 26466322 aataaatgttg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776830 11 + 43916225 aataaatgttg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214709 11 + 75399963 aataaatgttg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762301 11 - 7209941 aataaatgttg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514143 11 + 3907144 aataaatgttG i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13688979 11 + 13852661 AATAAATGTTG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459143 11 - 129401213 GTTAAATGCTG i mm10.chr8 C 0 I 9 s dasNov3.JH569970 915237 11 + 1009443 AATAAATACTG i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=5159.000000 s hg38.chr16_GL383557v1_alt 35989 1 + 89672 G s panTro5.chr16 21462231 1 - 81586097 g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529042 1 - 90481686 g i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761904 1 + 3010529 g i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347308 1 - 74971481 g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057444 1 - 78541002 g i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453386 1 + 26466322 g i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776841 1 + 43916225 g i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214720 1 + 75399963 g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762312 1 - 7209941 g i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514154 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s dasNov3.JH569970 915248 1 + 1009443 A i dasNov3.JH569970 C 0 I 434 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e otoGar3.GL873566 13688990 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=81959.000000 s hg38.chr16_GL383557v1_alt 35990 16 + 89672 ggccgggcgtggtggc s panTro5.chr16 21462232 16 - 81586097 ggccgggcgtggtggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529043 16 - 90481686 ggccgggcgtggtggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761905 16 + 3010529 ggccgggcgtggtggc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347309 16 - 74971481 ggccgggcgtggtgac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057445 16 - 78541002 ggccgggcgtggtgac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453387 16 + 26466322 ggccgggcgtggtgac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776842 16 + 43916225 ggccaggcgtggtgac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214721 16 + 75399963 ggccgggcgtggtgac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762313 16 - 7209941 ggccaggcgtggtgac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514155 16 + 3907144 ggccgggcgtggtgac i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13688990 6 + 13852661 ----------AGTGAC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=480849.000000 s hg38.chr16_GL383557v1_alt 36006 102 + 89672 tcattcctgtaatcccagcactttcggaggccgaggtgggtggatcacgaggtcaggagttcgagacaagtctggc-aagatggtgaaactccaactctaata s panTro5.chr16 21462248 103 - 81586097 tcattcctgtaatcccagcacttttggaggccgaggtgggtggatcacgaggtcaggagttcgagaccagtctggccaagatggtgaaactccaactctaata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529059 103 - 90481686 tcattcctgtaatcccagcactttcggaggccgaggtgggtggatcacgaggtcaggagttcgagaccagtctggccaagatggtgaaactccaactctaata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 761921 103 + 3010529 tcattcctgtaatcccagcactttcggaggccgaggtgggtggatcacgaggtcaggagttcgagaccagtctggccaagatggtgaaactccaactctaata i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347325 103 - 74971481 tcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacgaggtcgggagttcgagaccagcctggccaagatggtgaaactccatctctacta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057461 103 - 78541002 tcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacgaggtcgggagttcgagaccagcctggccaagatggtgaaactccatctctacta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453403 103 + 26466322 tcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacgaggtcgggagttcgagaccagcctggccaagatggtgaaactccatctctacta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776858 103 + 43916225 tcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacgaggtcaggagttcgagaccagcctggccaagatggtgaaaccccatctctacta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214737 103 + 75399963 tcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacgaggtcaggagttcgagaccagcctggccaagatggtgaaactccatctctacta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762329 103 - 7209941 tcatgcctgtaattccagcactttgggaggccaaggtgggtggatcacgaggtcaggagttcgagaccagcctggccaagatggtgaaactccatctctacta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514171 98 + 3907144 tcatgcctgtaattccagcactttgggagctcgaggtgggtggatcacaaggtcaggagttcg-----agcctggccaagatggtgaaactccatctctacta i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e otoGar3.GL873566 13688996 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=73212.000000 s hg38.chr16_GL383557v1_alt 36108 14 + 89672 aaaatacaaaaatt s panTro5.chr16 21462351 14 - 81586097 aaaatacaaaaatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529162 14 - 90481686 aaaatacaaaaatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762024 14 + 3010529 aaaatacaaaaatt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347428 14 - 74971481 aaaatacaaaaagt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057564 14 - 78541002 aaaatacaaaaatt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453506 14 + 26466322 aaaatacaaaaatt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776961 14 + 43916225 aaaatacaaaaatt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214840 14 + 75399963 aaaatacaaaaatt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762432 14 - 7209941 aaaatacaaaaatt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514269 14 + 3907144 aaaatacaaaaatt i colAng1.NW_012123265v1 C 0 I 217 s otoGar3.GL873566 13688996 12 + 13852661 AAAATAAAAAAA-- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=153432.000000 s hg38.chr16_GL383557v1_alt 36122 43 + 89672 aacccagtgc-----ggtggcaggtgcctgtgatcccagctactcggg s panTro5.chr16 21462365 48 - 81586097 aacccagtgcagtgcggtggcaggtgcctgtgatcccagctactcggg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529176 48 - 90481686 aacccagtgcagtgcggtggcaggtgcctgtgatcccagctactcagg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762038 43 + 3010529 aacccagtgt-----ggtggcaggtgcctgtgatcccagctactcggg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347442 43 - 74971481 aactgggcgt-----ggtggcaggtgcctgtgatcccagctactcggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057578 43 - 78541002 aactgggcgt-----ggtggcaggtgcctgtgatcccagctactcggg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453520 43 + 26466322 aactgagcgt-----ggtggcaggtgcctgtgatcccagctactcggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20776975 43 + 43916225 aactgggcat-----ggtggcaggtgcctgtgatcccagctactcggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214854 43 + 75399963 aactgggcgt-----ggtggcaggtgcctgtgatcccagctactcggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762446 43 - 7209941 aactgggcat-----ggtggcaggtgcctgtgatcccagctactcggg i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13689008 17 + 13852661 -------------------------------GGTCCAAATTCCTCTGG i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e colAng1.NW_012123265v1 514283 217 + 3907144 I e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=78165.000000 s hg38.chr16_GL383557v1_alt 36165 18 + 89672 aggctgaggcaggagaag s panTro5.chr16 21462413 18 - 81586097 aggctgaggcaggagaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529224 18 - 90481686 aggctgaggcaggagaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762081 18 + 3010529 aggctgaggcaggagaag i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347485 18 - 74971481 aggctgaggcaggagaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057621 18 - 78541002 aggctgaggcaggagaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453563 18 + 26466322 aggctgaggcaggagaag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777018 18 + 43916225 aggctgaggcaggagaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214897 18 + 75399963 aggctgaggcaggagaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762489 18 - 7209941 aggctgaggcaggagaag i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e colAng1.NW_012123265v1 514283 217 + 3907144 I e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e otoGar3.GL873566 13689025 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=495577.000000 s hg38.chr16_GL383557v1_alt 36183 114 + 89672 cacttgaacccgggaggcggaggttgcagtgagccaagatagcgccactgctctccagcctgggtgacagagcaagagttcgtct-AAaaataaataaataaataaaac-taaata s panTro5.chr16 21462431 114 - 81586097 cacttgaacccgggaggcggaggttgcagtgagccaagatagcgccactgcactccagcctgggtgacagagcaagagttcgtct-AAaaataaataaataaataaaac-taaata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529242 114 - 90481686 cacttgaacccgggaggcggaggttgcagtaagccaagatagcgccactgcactccggcctgggtgacagagcaagagttcgtct-AAaaataaataaataaataaaac-taaata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762099 114 + 3010529 cacttgaacccgggaggcggaggttgcagtgagccaagacagcgccactgcactccagcctgggtgacagagcaagagttcatct-AAaaataaataaataaataaaac-taaata i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347503 115 - 74971481 cacttgaacccggaaggcagaggatacagtgagctgagatcgggccactgcactccagcctgggtgacagagcaagacttcatctcaaaaataaataaataaataaaat-gaaata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057639 115 - 78541002 cacttgaacccggaaggcagaggatacagtgagctgagatcgggccactgcactccagcctgggtgacagagcaagacttcatctcaaaaataaataaataaataaaat-gaaata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453581 111 + 26466322 cacttgaacccggaaggcaaaggatacagtgagccgagatcgggccactgcactccagcctgggtgacagagcaagacttcatctcaa----aaataaataaataaaat-gaaata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777036 115 + 43916225 cacttgaacccggaaggcagaggatacagtgagccgagatcaggccactgcactccagcctgggtgacagagcaagacttcatctcaaaaataaataaataaataaaat-gaaata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58214915 115 + 75399963 cacttgaacccggaaggcagaggatacagtgagccgagatcgtgccactgcactccagcctgggtgacagagcaagacttcatctcaaaaataaataaataaataaata-aaacga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762507 115 - 7209941 cacttgaacccggaaggcagaggatacagtgagccgagatcgggccactgcactccagcctgggtgacagagcaagacttcatctcaaaaataaataaataaataaaat-gaaata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514500 116 + 3907144 cacttgaacccgggagacagaggatacagtgagccgagatcgtgccactgcactccagcctgggtgacagagcaacacttcatctcaaaaataaataaataaataaaaaggaaata i colAng1.NW_012123265v1 I 217 C 0 e canFam3.chr5 80454986 39 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e otoGar3.GL873566 13689025 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=19415.000000 s hg38.chr16_GL383557v1_alt 36297 4 + 89672 aata s panTro5.chr16 21462545 4 - 81586097 aata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529356 4 - 90481686 aata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762213 4 + 3010529 aata i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347618 4 - 74971481 aata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057754 4 - 78541002 aata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453692 4 + 26466322 aata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777151 4 + 43916225 aata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215030 4 + 75399963 aata i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762622 4 - 7209941 aata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514616 4 + 3907144 aata i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80455025 4 + 88915250 actt i canFam3.chr5 I 39 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e aotNan1.NW_018500622v1 9267316 0 - 10531588 C e cebCap1.NW_016107433v1 3305768 0 - 5917169 C e saiBol1.JH378225 6322106 0 + 6628207 C e calJac3.chr20 21516902 477 - 44557958 I e otoGar3.GL873566 13689025 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=151603.000000 s hg38.chr16_GL383557v1_alt 36301 15 + 89672 aataaatGT----TGACAG s panTro5.chr16 21462549 15 - 81586097 aataaatgt----tgacag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529360 15 - 90481686 aataaatgt----tgacag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762217 15 + 3010529 aataaatgt----tgacag i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347622 15 - 74971481 aataaatgt----tgacag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057758 15 - 78541002 aataaatgt----tgacag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453696 15 + 26466322 aataaatgt----tgacag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777155 15 + 43916225 aataaatat----tgacag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215034 15 + 75399963 aataaatGT----TGACAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762626 15 - 7209941 aataaatat----tgacag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514620 15 + 3907144 aataaatGT----TGACAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21517379 15 - 44557958 aataaatgt----tgacag i calJac3.chr20 I 477 C 0 s saiBol1.JH378225 6322106 15 + 6628207 aataaatgt----tgacag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305768 15 - 5917169 aataaatgc----tgaaag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267316 15 - 10531588 aataaatgt----tgacag i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80455029 19 + 88915250 aataaatgttgactgacag i canFam3.chr5 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 915249 434 + 1009443 I e otoGar3.GL873566 13689025 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=250997.000000 s hg38.chr16_GL383557v1_alt 36316 26 + 89672 AATGAAAATGGTCTAAATTCCTCTGG s panTro5.chr16 21462564 26 - 81586097 aatgaaAATGGTCTAAATTCCTCTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529375 26 - 90481686 aatgaaAATGGTCTAAATTCCTCTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762232 26 + 3010529 aatgaaAATGGTCTAAATTCCTCTGG i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347637 26 - 74971481 aatgaGAATGGTCTAAATTATTCTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057773 26 - 78541002 aatgaGAATGGTCTAAATTATTCTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453711 26 + 26466322 aatgaGAATGGTCTAAATTATTCTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777170 26 + 43916225 aatgaGAATGGTCTAAATTATTCTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215049 26 + 75399963 AATGAGAATGGTCTAAATTATTCTGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762641 26 - 7209941 aatgaGAATGGTCTAAATTATTCTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514635 26 + 3907144 AATGAGAATGGTCTAAATTATTCTGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21517394 26 - 44557958 aatgaaAATGGTCCAAATTCCTTTGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322121 26 + 6628207 aatgaaAATGGTCCAAATTCCTTTGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305783 26 - 5917169 aatgaaAATGGTCCAAATTCCTTTGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267331 26 - 10531588 aatgaaAATGGTCCAAATTCCTTTGG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80455048 26 + 88915250 aatgaaaaaggtccaaattcctctgg i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 915683 26 + 1009443 actggaccaagtctgcttcccCCCGG i dasNov3.JH569970 I 434 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e otoGar3.GL873566 13689025 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=86522.000000 s hg38.chr16_GL383557v1_alt 36342 7 + 89672 TTGGCTT s panTro5.chr16 21462590 7 - 81586097 TTGGCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529401 7 - 90481686 TTGGCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762258 7 + 3010529 TTGGCTT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347663 7 - 74971481 TTGGCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21057799 7 - 78541002 TTGGCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14453737 7 + 26466322 TTGGCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777196 7 + 43916225 TTGGCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215075 7 + 75399963 TTGGCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6762667 7 - 7209941 TTGGCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 514661 7 + 3907144 TTGGCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21517420 7 - 44557958 CTGGCTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322147 7 + 6628207 CTGGCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305809 7 - 5917169 CTGGCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267357 7 - 10531588 CTGGCTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689025 7 + 13852661 CTGGCTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455074 7 + 88915250 ctggctt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 915709 7 + 1009443 CTGGTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459154 9 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=3671157.000000 s hg38.chr16_GL383557v1_alt 36349 309 + 89672 TCAATAACTTGCATAATCTGGCTTC-AATCTATCTACCCAACTTTATTTTCTTCCCTCAAGTCCATACCAATTAGCCATTCCCCTCACTT-TGTATCATATGTCATGCTCA-TTTTGGCTTTTGTTCA-GGCCATCCCCTCAACTTGAACTGACTTCAGTCTACAGAGAAGTAGCC-TGTCCCTCAAGCCTG----------T-CTCCTTTCCCTAGGAAGTCATACTCAATTCTTTCATCCCCCAATTAATCATTCCCTTTAGTGAACTCTTGAAGAGTGAGTTTTACAC------ACTTTAGCAACTATTTTCTATGGGGTAGtttttc s panTro5.chr16 21462597 323 - 81586097 TCAATAACTTGcataatctggcttc-aatctatctacccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgttca-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccctcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatattcaattctttcatcccccaattaatcattccctttagtgaactcttgaagagtgagttttacactttagcactttagcaactattttctatGGGGTAGtttttc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529408 323 - 90481686 TCAATAACTTGcataatctggcttc-aatctatctacccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgttca-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccctcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatattcaattctttcatcccccaattaatcattccctttagtgaactcttgaagagtgagttttacactttagcactttagcaactattttctatGGGGTAGtttttc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762265 317 + 3010529 TCAATAACTTGcataatctggcttc-aatctatctacccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgttca-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccctcaagcctgag-atctaa-t-ctcctttccctaggaagtcatactcaattctttcatcccccaattaatcattccctttagtgaactcttGAAGAGTGAATTTTACAC------ACTTTAGCAACTATTTTCTATGGGGTAGtttttc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347670 317 - 74971481 TCAATAACTTGcataatctggcttc-aatctatctatccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgctta-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccttcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatactcaattccttcatcacccaattaatcattccctttagtgaactcttgaagagtgagttttacac------actttagcaACTATTTTCTATGGGGTAGtttttc i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21057806 317 - 78541002 TCAATAACTTGCATAATCTGGCTTC-AATCTATCTATCCAACTTTATTTTCTTCCCTCAAGTCCATACCAATTAGCCATTCCCCTCACTT-TGTATCATATGTCATGCTCA-TTTTGGCTTTTGCTTA-GGCCATCCCCTCAACTTGAACTGACTTCAGTCTACAGAGAAGTAGCC-TGTCCTTCAAGCCTGAG-ATCAAA-T-CTCCTTTCCCTAGGAAGTCATACTCAATTCCTTCATCACCCAATTAATCATTCCCTTTAGTGAACTCTTGAAGAGTGAGTTTTACAC------ACTTTAGCAACTATTTTCTATGGGGTAGtttttc i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14453744 317 + 26466322 TCAATAACTTGcataatctggcttc-aatctatctatccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgctca-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccttcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatactcaattccttcatcacccaattaatcattccctttagtgaactcttgaagagtgagttttacac------actttagcaactatttTCTATGGGGTAGtttttc i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20777203 317 + 43916225 TCAATAACTTGcataatctggcttc-aatctatctatccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcgtatgtcatgctca-ttttggcttttgctca-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccttcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatactcaattctttcatcacccaattaatcattccctttagtgaactcttGAAAAGTGAGTTTTACAC------ACTTTAGCAACTATTTTCTATGGGGTAGtttttc i cerAty1.NW_011999143v1 C 0 I 9 s chlSab2.chr5 58215082 316 + 75399963 TCAATAACTTGCATAATCTGGCTTC-AATCTATCTATCCAACTTTATTTTCTT-CCTTAAGTCCATACCAATTAGCCATTCCCCTCACTT-TGTATCTTATGTCATGCTCA-TTTTGGCTTTTGCTCA-GACCATCCCCTTAACTTGAACTGACTTCAGTCTACAGAGAAGTAGCC-TGTCCTTCAAGCCTGAG-ATCAAA-T-CTCCTTTCCCTAGGAAGTCATACTCAATTCTTTCATCACCCAATTAATCATTCCCTTTAGTGAACTCTTGAAGAGTGAGTTTTACAC------ACTTTAGCAACTATTTTCTATGGGGTAGtttttc i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6762674 317 - 7209941 TCAATAACTTGcataatctggcttc-aatctatctatccaactttattttcttccctcaagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgctca-ggccatcccctcaacttgaactgacttcagtctacagagaagtagcc-tgtccttcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatactcaattctttcatcacccaattaatcattccctttagtgaactcttgaagagtgagttttacac------actttagcaACTATTTTCTATGGGGTAGtttttc i manLeu1.NW_012101698v1 C 0 I 9 s colAng1.NW_012123265v1 514668 317 + 3907144 TCAATAACTTGcataatctggcttc-aatctatctatccacctttattttcttccctctagtccataccaattagccattcccctcactt-tgtatcatatgtcatgctca-ttttggcttttgctca-ggccatcccctcaacgtgaactgacttcagtctacagagaagtagcc-tgtccttcaagcctgag-atcaat-t-ctcctttccctagaaagtcatattcaattctttcatcacccaattaatcattccctttagtgaactcttgaagagtgagttttacac------actttagcaACTATTTTCTATGGGGTAGtttttc i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21517427 314 - 44557958 TC---AACTTGCATAATCTGCCTTC-AATCTATCTGCCCAACTTTATTTTCCTCCCTCAAGTCCATACCAATTAGCCATTCCCCTCACTT-CGTTTCATATGTCATGCTCG-TTTTGGCTTTTGCTGA-GGTTGTACCCTCAACTTGAACTGACTTCAGTCTCCAGAGCAGTAGCC-TGTCCTTCAAGCCTGCG-ATCAAA-T-CTCCTTTCCCTAAGAAGTCATGCTCAATTCTTTCATCCCCCAATTAACCATTCCCTTTACTGAACTCTTAAAGAGAGACTTTCACAC------ACATTAACAATTATTTTCTATGGGGTAGttttct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322154 316 + 6628207 TCCATAACTTGCATAATCTGCCTTC-AATCTATCTGCCCAACTTTATTTTCCTCCCTCAAGTCCATACCAATTAGCCATTCCCCTCACCT-CGTATCATATGTCATGCTCG-TTTTGGCTTTTGCTCA-GGCTGTACCCTCAACGTGAACTGACCTCAGTCTACAGATCAGTAGCC-TGTCCTTCAAGCCTTAG-ATCAAA-T-CTCCTTTCCCTAGGAAGTCATGCTCAATTATTTCATCCCCCAATTAACCATTCCCTTTAGTGAACTCTTGAAAAGAGAGTTTTACAC------ACTTTAGCAATTATTTTCTATGGGGTAG-tttct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3305816 314 - 5917169 TCCATAACTTGTataatctgccttc-aatctatctgcccaactttattttcctccctcaagtccataccaattagccattcccctcactt-cgtatcatatgtcatgctca-ttctggcttttgctca-ggctgtaccctcaacttgaactgacttcagtctacagagcagtagccttgtccttcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatgctcaattatttcatcccccaattaaccattccctttagtgaactcttga----agacttttatac------actttagcaattatttTCTATGGGGTAGttttct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267364 317 - 10531588 TCAATAACTTGcataatctgccttc-aatctatctgcccaattttattttcctccctcaagtccataccaattagccattcccctcactt-cgtatcatatgtcatgctca-ttttggcttttgctca-ggctgtatcctcaacttgaactgactttagtctacagagcagtagcc-tgtccttcaagcctgag-atcaaa-t-ctcctttccctaggaagtcatgctcaattatttcatcccccaattaaccattccctttagtgaactcttgaagagagagttttacac------actttagcaattatttTCTATGGGGTAGttttct i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689032 282 + 13852661 TCAAGGACTTGCATAATCTGGCTCT-GATCTATTTACCCAACTTTATTTTCTTCCCCTAAGTCCATAC----TAACTATTCTCCTCACTT-CCTATCATGTGTCATACTCATTTTTGGCTTTTGTTCA-ACCTGTCCCTTCAACTTGAACTGACTTCTATCTATAGAGAAGCTGCC-TGTGCTCCAAGTCTCAG-ATCAAATT-CTCCTTTCCCCATGAAGTCATACTCAATTGTCCCACCCCAAAATTGATCATTTCCTTCAGAGAACTCCTGAAGAGTAAGTACTACAC------A--------------------------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459163 283 - 129401213 TCAAAGTCTTGCACAACC---------------CTAATTGATTTCACTTTCTTCCCTTGGGTCTGTACCAGTTAGCTCTCCACTCCAGTC-CCTACTACATGTCATGCTCA--TTTGGCTTTTGTTCA-AACTACCCTCTCAATTTGGATTGACTTCCATCTACAGAGA--------TGC-------GCCTAGG-ATCAAATT-CTCCTTCCTTCGGGAAGTCACAGTCAACTATTCCATCCCCCAGCTGATTACTCCCTTCAGAGAAATCCCAACAGA------TTATAC------ATTTTAGCAGAAACTCTCTAGCTAACAGTCTTCT i mm10.chr8 I 9 C 0 s canFam3.chr5 80455081 306 + 88915250 tcaaggccttgcataatctggctct-aatttatctacccaaccttattttcttcc---aAGTCCATTC-------CTATTCTCCTCACTT-CCTATCATATGTCATGCTCA-TTTTGGCCTTAGTACA-GGTTACCCCCTCAACTTGGAAGGTCTTCCATCTACTGAGAAGCAACC-TGTCTCTCAAGCCTCAG-ATCTAA-TAATCCTTTTCCCATGATGTCACACTCTACCCTTTCCCGCCACAACTGATCATTCCCTTCACAGAACTCTTGAAGAG--AGTACTACAC------ATTTGATCACTTACTCTCCATGTGGTAGTTTTCT i canFam3.chr5 C 0 I 8 s dasNov3.JH569970 915716 296 + 1009443 TCAAGCCCTTTCATAATCTGCCTCTAAATCTGTTTACCCAACTTTATTTTCACTCCCCAAGTACATTCCAATTAGCCATTTGCCTCACTTCCCTATCATATATCATTCTCA-TTTTGGCTTTTGCTTATGTTTATCCCTCAAACTTGGACTGTCTTCCATCTACAGAAAAACAATC-TGGCCTTCAAGCCTCAGAATCAGT-A-CTCCTTTCCCAATGAATTCACACTCAACTCTTCCATTCCCCA-TTGGTCATACCTTTCACAGAACTCTTAA---------------------------AGCAACTTTTCCCTATGTAGTGATTT--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=-22416.000000 s hg38.chr16_GL383557v1_alt 36658 15 + 89672 ttttctttt-----cttttc s panTro5.chr16 21462920 15 - 81586097 ttttctttt-----cttttc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529731 15 - 90481686 ttttctttt-----cttttc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762582 13 + 3010529 ttttcttt-------ttttt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347988 8 - 74971481 ttttccct------------ i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21058124 8 - 78541002 ttttccct------------ i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14454062 8 + 26466322 ttttccct------------ i macNem1.NW_012011355v1 I 1 C 0 s chlSab2.chr5 58215399 8 + 75399963 ttttccct------------ i chlSab2.chr5 I 1 C 0 s colAng1.NW_012123265v1 514986 8 + 3907144 ttttccct------------ i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21517741 13 - 44557958 tttttttt------ctttt- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322470 13 + 6628207 tttttttt------ctttt- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306130 18 - 5917169 ttttttttt-tttcctttt- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267681 9 - 10531588 tttt----------ctttt- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689314 2 + 13852661 --tt---------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459446 19 - 129401213 CTTTCCCCAATTTATTTTT- i mm10.chr8 C 0 I 7 s canFam3.chr5 80455395 4 + 88915250 TTTT---------------- i canFam3.chr5 I 8 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916012 0 + 1009443 C e manLeu1.NW_012101698v1 6762991 9 - 7209941 I e cerAty1.NW_011999143v1 20777520 9 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=552333.000000 s hg38.chr16_GL383557v1_alt 36673 60 + 89672 ttttttgaagacagggtctcgct--gtcacccaggatggagtacagtggt-------------gcaatctgcaac s panTro5.chr16 21462935 62 - 81586097 ttttttgaagacagggtcttgctctgtcacccaggatggagtacagtggt-------------gcaatctgcaac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529746 62 - 90481686 ttttttgaagacagggtcttgctctgtcacccaggatggagtacagtggt-------------gcaatctgcaac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762595 62 + 3010529 ttttttgaagacagggtctcgctctgtcacccaggatggagtacagtggt-------------gcaatctgcaac i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21347996 62 - 74971481 ttttttgaagacagggtctcgctctgtcacctaagccggagtgcagtggt-------------gcaatcTGCAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058132 62 - 78541002 ttttttgaagacagggtctcgctctgtcacctaagccggagtgcagtggt-------------gcaatcTGCAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454070 62 + 26466322 ttttttgaagacagggtctcgctctgtcacctaagccggagtgcagcggt-------------gcaatcTGCAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777529 62 + 43916225 ttttttgaagacagggtctcgctctgtcacctaagccggagtgcagtggt-------------gcaatcTGCAAC i cerAty1.NW_011999143v1 I 9 C 0 s chlSab2.chr5 58215407 62 + 75399963 ttttttgaagacagggtctcgctctgtcacctaagccagagtgcagtggt-------------gcaatcTGCAAC i chlSab2.chr5 C 0 I 38 s manLeu1.NW_012101698v1 6763000 62 - 7209941 ttttttgaagacagggtctcactctgtcacctaagccggagtgcagtggt-------------gcaatcTGCAAC i manLeu1.NW_012101698v1 I 9 C 0 s colAng1.NW_012123265v1 514994 62 + 3907144 ttgtttgaagacagggtctcgctctgtcacctaggctggagtgctgtggt-------------gcaatctgcaac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21517754 62 - 44557958 tcttttgaagacagagtcttgctctgtcacccaggctggagtgcagtgat-------------gcgatctgcaac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322483 62 + 6628207 tcttttgaagacagggtcttgctctgtcacccaggctggagtgcggtgat-------------atgatctgcaac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306148 62 - 5917169 tcttttgaagacagggtcttgctctgtcacccaggctggagtgcagtgat-------------atgatctgcaac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267690 62 - 10531588 tcttttgaagacagggtcttgctctgtcacccaggctggagtgcagtgat-------------gtgatctgcaac i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689316 75 + 13852661 tttttttgagacagagcctcaagctgtcccactgggtagagtgccatggcttcactgctcacagcaacctccaac i otoGar3.GL873566 C 0 I 91 s mm10.chr8 22459472 31 - 129401213 ttttttcaagacaggaccttgcttc----------------tgcggc---------------------------- i mm10.chr8 I 7 C 0 e canFam3.chr5 80455399 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916012 0 + 1009443 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=15625.000000 s hg38.chr16_GL383557v1_alt 36733 2 + 89672 ct s panTro5.chr16 21462997 2 - 81586097 ct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529808 2 - 90481686 ct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762657 2 + 3010529 ct i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348058 2 - 74971481 TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058194 2 - 78541002 TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454132 2 + 26466322 TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777591 2 + 43916225 TT i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6763062 2 - 7209941 TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515056 2 + 3907144 ct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21517816 2 - 44557958 ct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322545 2 + 6628207 ct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306210 2 - 5917169 ct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267752 2 - 10531588 ct i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689482 2 + 13852661 ct i otoGar3.GL873566 I 91 C 0 s mm10.chr8 22459503 2 - 129401213 ct i mm10.chr8 C 0 C 0 e canFam3.chr5 80455399 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916012 0 + 1009443 C e chlSab2.chr5 58215469 38 + 75399963 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=30716.000000 s hg38.chr16_GL383557v1_alt 36735 4 + 89672 ccgc s panTro5.chr16 21462999 4 - 81586097 ccgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529810 4 - 90481686 ccgc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762659 4 + 3010529 ctgc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348060 4 - 74971481 CCGC i rheMac8.chr20 C 0 I 28 s macFas5.chr20 21058196 4 - 78541002 CCGC i macFas5.chr20 C 0 I 13 s macNem1.NW_012011355v1 14454134 4 + 26466322 CCGC i macNem1.NW_012011355v1 C 0 I 516 s cerAty1.NW_011999143v1 20777593 4 + 43916225 CCGC i cerAty1.NW_011999143v1 C 0 I 20 s manLeu1.NW_012101698v1 6763064 4 - 7209941 CCGC i manLeu1.NW_012101698v1 C 0 I 20 s colAng1.NW_012123265v1 515058 4 + 3907144 ccgc i colAng1.NW_012123265v1 C 0 I 41 s calJac3.chr20 21517818 4 - 44557958 ccgt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322547 4 + 6628207 ccac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306212 4 - 5917169 ccgt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267754 4 - 10531588 ctgt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689484 4 + 13852661 ccaa i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 916012 3 + 1009443 -CGC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80455399 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459505 0 - 129401213 C e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e chlSab2.chr5 58215469 38 + 75399963 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=42697.000000 s hg38.chr16_GL383557v1_alt 36739 13 + 89672 ctcctgggttcaa s panTro5.chr16 21463003 13 - 81586097 ctcctgggttcaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529814 13 - 90481686 ctcctgggttcaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762663 13 + 3010529 ctcctgggttcaa i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21517822 13 - 44557958 ctcccagattcaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322551 13 + 6628207 ctcccaggttcaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306216 13 - 5917169 ctcccaggttcaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267758 13 - 10531588 ctcccaggttcaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689488 13 + 13852661 ctcctgggctcaa i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455399 7 + 88915250 ------AGTTTAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916015 13 + 1009443 TCCCCCAATTTAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459505 0 - 129401213 C e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=197450.000000 s hg38.chr16_GL383557v1_alt 36752 84 + 89672 gtgattctcctgcctcagcctcccgagtagctgggatcacaggtgcacgcctccacgcctgactaatttttg-----------tatttttagtag s panTro5.chr16 21463016 84 - 81586097 gtgattctcctgcctcagcctcccgagcagctgggatcacaggtgcacgcctccacgcctgactaatttttg-----------tatttttagtag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529827 84 - 90481686 gtgattctcctgcctcagcctcccgagcagctgggatcacaggtgcacgcctccacgcctgactaatttttg-----------tatttttagtag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762676 84 + 3010529 gtgattctcctgcctcagcctcccgagtagctgggatcacaggtgcacgcctccacgcctgactaatttttg-----------tatttttagtag i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21517835 84 - 44557958 gcgattctcttgcctcagtctcccaagcagctgggtttaaaggcacacacttcaaagcctgactaatttttg-----------tatttttagtag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322564 84 + 6628207 gcgattctcttgcctcagcctcccgagcagctgggtttaaaggcacacacttccaagcctgactaatttttg-----------tatttttagtag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306229 84 - 5917169 gcgattctcttgcctcagcctcccgagcagctgggtttaaaggcacacacttccaagcctgactaaactttg-----------tatttttagtag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267771 84 - 10531588 gcgattctcttgcctcagcctcccgagcagctgggtttaaaggcacacacttccaagcctgactaatttttg-----------tatttttagtag i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689501 90 + 13852661 gtgagtctcctgcctcagcctcccaagtagctgggactacgggcgcccgccacaatgcccggccattttttggttgcagccattattgtt----- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455406 22 + 88915250 GTTCTT-------------------------TGAGGCCAAAGACTCA------------------------------------------------ i canFam3.chr5 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459505 0 - 129401213 C e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916028 0 + 1009443 C e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=52814.000000 s hg38.chr16_GL383557v1_alt 36836 32 + 89672 agatggggtttcaccatattgg--ccaggctggt s panTro5.chr16 21463100 32 - 81586097 agatggggtttcaccatattgg--ccaggctggt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529911 32 - 90481686 agatggggtttcaccatattgg--ccaggctggt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762760 32 + 3010529 agatggggtttcaccatattgg--ccaggctggt i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21517919 29 - 44557958 aaacagggttt---catgttgg--ccaggctggt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322648 29 + 6628207 aaacagggttt---catgttgg--ccaggctggt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306313 29 - 5917169 aaacagggttt---catgttgg--ccaggctggt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267855 29 - 10531588 aaacagggttt---catgttgg--ccgggctggt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689591 21 + 13852661 -------gttt------ggcgggcccaggctgga i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459505 8 - 129401213 --------------------------aggcaggc i mm10.chr8 C 0 C 0 s canFam3.chr5 80455428 25 + 88915250 -------ACTTCAACTTATCTT--GCACGCTGAT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916028 0 + 1009443 C e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=5159.000000 s hg38.chr16_GL383557v1_alt 36868 1 + 89672 c s panTro5.chr16 21463132 1 - 81586097 c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529943 1 - 90481686 c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762792 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21517948 1 - 44557958 c i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322677 1 + 6628207 c i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306342 1 - 5917169 c i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267884 1 - 10531588 c i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689612 1 + 13852661 t i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459513 1 - 129401213 c i mm10.chr8 C 0 C 0 s canFam3.chr5 80455453 1 + 88915250 C i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916028 1 + 1009443 C i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=25482.000000 s hg38.chr16_GL383557v1_alt 36869 10 + 89672 tcg-aactcct s panTro5.chr16 21463133 10 - 81586097 tcg-aactcct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529944 10 - 90481686 tcg-aactcct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762793 10 + 3010529 tcg-aactcct i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21517949 10 - 44557958 ttg-aacccct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322678 10 + 6628207 ttg-aacccct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306343 10 - 5917169 ttg-aacccct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267885 10 - 10531588 ttg-aacccct i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689613 10 + 13852661 tcg-aacctgc i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459514 11 - 129401213 atataacttgc i mm10.chr8 C 0 C 0 s dasNov3.JH569970 916029 10 + 1009443 TTG-AAGTTCT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80455454 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=232008.000000 s hg38.chr16_GL383557v1_alt 36879 109 + 89672 gaccttgtg---atccgcccg---cctcggcctcccaaa-----------gtgctgggattacaggtgtgagccaccgcacccggccAATGGGGTACTTTTCTTTCCCTAGTTTCTCTCT-AATGAT s panTro5.chr16 21463143 109 - 81586097 gaccttgtg---atccgcccg---cctcggcctcccaaa-----------gtgctgggattacaggtgtgagccaccgtacccggccAATGGGGTACTTTTCTTTCCCTAGTTTCTCTCT-AATGAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21529954 109 - 90481686 gaccttgtg---atccacccg---cctcggcctcccaaa-----------gtgctgggattacaggtgtgagccaccgtacccggccAATGGGGTACTTTTCTTTCCCTAGTTTCTCTCT-AATGAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762803 109 + 3010529 gaccttgtg---atccgcccg---cctcggcctcccaaa-----------gtgctgggattacaggtgtgagccaccgcgcctggccAATGGGGTACTTTTCTTTCCCTAGTTTCTCTCT-GATGAT i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21517959 105 - 44557958 gacctcatg---atccaccca---cctcagcctcccaaa-----------gtgctgggattacagacatgagccaccacgtctggccTATGGTGTACTTTTCTTTCCCCAGTT----TCT-AATTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322688 105 + 6628207 tacctcatg---atccaccca---cctcagcctcccaaa-----------gtgctgggattacagacataagccaccaagtctggccTATGGTGTACTTTTCTTTCCCCAGTT----TCT-AATTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306353 105 - 5917169 gacctcatg---atccatcca---cctcagcctcccaaa-----------gtgctgggattacagacattagccaccacgtctggccTATGGTGTACTTTTCTTTCCCCAGTT----TCT-AATTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9267895 105 - 10531588 gacctcatg---atccaccca---cctcagcctcccaaa-----------gtgctgggattacagacatgagccaccacatctggccTATGGTGTACTTTTCTTTCCCTAGTT----TCT-AATTAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689623 123 + 13852661 caccttaggtgtatgtggctggtaccttagccacttaagccataggcgccaagccAGTAGTACACATTTTAACAATTATTC----TCTATGCAGTAATTTTTTCTCCCTATTTTCTCTCTAAATTCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459525 79 - 129401213 ------------attcccctg---cctcagctttctga------------ttgctcacatt--aggcacgtgccaacacacctagc------------tCTCTCTCCTGCATTACACTCT------- i mm10.chr8 C 0 C 0 e canFam3.chr5 80455454 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916039 0 + 1009443 C e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=151681.000000 s hg38.chr16_GL383557v1_alt 36988 42 + 89672 TTGATGCCAAGGACCATCTTCA----TTTTACTTTGCCCATTGATC s panTro5.chr16 21463252 42 - 81586097 TTGATGCCAAGGACCATCTTCA----TTTTACTTTGCACATTGATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530063 42 - 90481686 TTGATGCCAAGGACCATCTTCA----TTTTACTTTGCACATTGATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762912 42 + 3010529 TTGATGCCAAGGACCATCTTCA----TTTTACTTTGCACATTGATC i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518064 42 - 44557958 TTGATGCCAAGGATCATCTTCA----TTTTACTTAGCACACTGATC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322793 42 + 6628207 TTGATGCCAAGGATCATTTTCA----TTTTACTTAGCACACTGATC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306458 42 - 5917169 TTGATGCCAAGGATCATCTTCA----TTTTACTTAGCACACTGATC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9268000 42 - 10531588 TTGATGCCAAGGATCATCTTCA----TTTTACTTAGCACACTGATC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689746 41 + 13852661 TTGATGCC-AGCAACATCTTCA----GCTTCATTTGCACACTGATC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459604 46 - 129401213 TTGATGCCAAGAACTATCTTCAGCTCTTCCCCCCCCCCCACAAACT i mm10.chr8 C 0 C 0 s dasNov3.JH569970 916039 41 + 1009443 TTGATGCCAGGGACCATCTTCA----ACTT-CTTTGCACACTGATC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80455454 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=151198.000000 s hg38.chr16_GL383557v1_alt 37030 36 + 89672 TCTCACAGCACACTACAACATAACAAGACACAGGAG s panTro5.chr16 21463294 36 - 81586097 TCTCACAGCACACTACAACATAACAAGACACAGGAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530105 36 - 90481686 TCTCACAGCACGCTACAACATAACAAGACACAGGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762954 36 + 3010529 TCTCACAGCACACTACAACATAACAAGACACAGGAG i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518106 36 - 44557958 TCTCACAGCACACTGCAACATAACAAGACACAGGAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322835 36 + 6628207 TCTCACAGCACAGTGCAACATAACAAGACACAGGAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3306500 36 - 5917169 TCTCACAGCACACTGCAACATAACAAGACACAGGAg i cebCap1.NW_016107433v1 C 0 I 1939 s aotNan1.NW_018500622v1 9268042 36 - 10531588 TCTCACAGCACACTGCAACATAACAAGACACAGGAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689787 36 + 13852661 TCTCATAGCATACTGTAACATTATGAGACACAGGAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459650 34 - 129401213 TCTC--AGTACAACGCACCACAGTAAGACACAGGAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80455454 36 + 88915250 TTTCACAACTCAATGCAACATGATGATACACAGGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916080 22 + 1009443 TTGCACAGCACACTGCAACATG-------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=417431.000000 s hg38.chr16_GL383557v1_alt 37066 151 + 89672 ATGCT-AAAGATATGACTGATTAGTTGTACG-----TAGCCCCGTCCAGGGGGGGAAGCACTGG-Actgggttttagtac----aacttccaccaactaatttgtcaggtgaccttaatcatgtcacttaaa---ctctgggtgttcattccttatct-ataagat s panTro5.chr16 21463330 151 - 81586097 ATGCT-AAAGATATGACTGATTAGTTGTACG-----TAGCCCAgtccaggggaggaagcactgg-actgggttttagtac----aacttctaccaactaatttgtcaggtgaccttaatcatgtcacttaaa---ctctgggtgttcattccttatct-ataagat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530141 151 - 90481686 ATGCT-AAAGATATGACTGATTAGTTGTACG-----TAGCCCAgtccaggggaggaagcactgg-actgggttttagtac----aacttctaccaactaatttgtcaggtgaccttaatcatgtcacttaaa---ctctgggtgttcattccttatct-ataagat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 762990 151 + 3010529 ATGCT-AAAGATATGACTGATTAGTTGTACG-----TAGCCCAgtccaggggaggaagcactgg-actgggttttagtac----aacttctaccaactaatttgtcaggtgaccttaatcatgtcacttaaa---ttctgggtattcattccttatct-acaagat i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518142 149 - 44557958 ATGCT-AAAGATCTGACTGATTAGTTGTagg-----tagcccagtccaggggaggaagcactgg-actgggttttagtcc----aagttctacc-actaatttgtcaggtgaccttaatcatgtcac-taaa---ctctggttgttcattcctcatgt-ataagat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6322871 150 + 6628207 ATGCT-AAAGATCTGACTAATTAGTTGTagg-----tagcccagtccaggggaggaagcactgg-actgggttttagtcc----aagttctacc-actaatttgtcaggtgaccttagtcgtgtcacttaaa---ctctggttgttcattcctcatct-ataagat i saiBol1.JH378225 C 0 I 335 s aotNan1.NW_018500622v1 9268078 150 - 10531588 ATGCT-AAAGATCTGATTGATTAGTTGTagg-----tagcccagtccaggagaggaagcactgg-actgggttttagtcc----aagttctacc-actaatttgtcaggtgaccttagtcatgtcacttaaa---ctctggttgttcattcctcatct-ataagat i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689823 149 + 13852661 ATGCTAAAAGATCTCACtgactggtcatagggaggatggcatggtattgaggaggaagcactga-attgggttttaaccc----aagttctacc-attaatttgtta---------catcacatcatataaa-ctctctggtcattcattcctcatct-ataaaat i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459684 128 - 129401213 -------------------CCTCTATGTAAG-----TGGACT------GTAAGAGACGCACTGGAAATAGGTTTTGGTCCCTTTGCTTTGTACC-ACTAAGCTGTTTGGTAA-CTGCACCATCTCACTTAAC---CTCAAG--GTTTGCTCCTCATTTGATAAAG- i mm10.chr8 C 0 C 0 s canFam3.chr5 80455490 152 + 88915250 AGGCT--GAGACCTgagtaactgattgtagg-----tagcatagtataagagagaaagcaatga-tctgggttttagtcc----aaattccacc-actaattagctagttgacctcaaacatgccacttaaccctctctggtcattaattcctcattt-ggaagat i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916102 149 + 1009443 ATGCT-TAA---ATAACTGACTGGTTGTgga-----tagcatggtacaggggagaaagctttgc-actggattttagtcc----aagttttacc-atttaatcatcaggtgaccctaaacatgtcacttaac-ctctctcgactttaactccttatct-ataagat i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=28296.000000 s hg38.chr16_GL383557v1_alt 37217 9 + 89672 cagACATTA s panTro5.chr16 21463481 9 - 81586097 cagACATTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530292 9 - 90481686 cagACATTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763141 9 + 3010529 cagACATTA i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518291 9 - 44557958 CAAACATTA i calJac3.chr20 C 0 I 308 s saiBol1.JH378225 6323356 9 + 6628207 CAGACATTA i saiBol1.JH378225 I 335 C 0 s aotNan1.NW_018500622v1 9268228 9 - 10531588 CAAACATTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13689972 9 + 13852661 gagATTTCA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22459812 9 - 129401213 CAGACTTCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80455642 9 + 88915250 aagACTTTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916251 9 + 1009443 gAAACTTTA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1883.000000 s hg38.chr16_GL383557v1_alt 37226 1 + 89672 C s panTro5.chr16 21463490 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530301 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763150 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518608 1 - 44557958 C i calJac3.chr20 I 308 C 0 s saiBol1.JH378225 6323365 1 + 6628207 C i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9268237 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 I 1149 s dasNov3.JH569970 916260 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80455651 0 + 88915250 C e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459821 0 - 129401213 C e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e otoGar3.GL873566 13689981 0 + 13852661 C e nomLeu3.chr2 53873836 1141 + 163208435 M a score=31952.000000 s hg38.chr16_GL383557v1_alt 37227 21 + 89672 --------CAACTT-TAAACAATCCAGGTA s panTro5.chr16 21463491 21 - 81586097 --------CAACTT-TAAACAATCCAGATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530302 21 - 90481686 --------CAACTT-TAAACAATCCAGATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763151 21 + 3010529 --------CAACTT-TAAACAATCCAGGTA i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518609 22 - 44557958 --------CAACTTTAAAAAAATCCAGGTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6323366 8 + 6628207 --------CAACTT--------------TA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13689981 21 + 13852661 --------CAACTT-TCAAAATTTCAGTTA i otoGar3.GL873566 C 0 I 258 s mm10.chr8 22459821 21 - 129401213 --------CAGCTT-TGAAAACTCCTGGGA i mm10.chr8 C 0 I 1 s canFam3.chr5 80455651 21 + 88915250 --------CAACTT-TAAAAATTCCAGGTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916261 29 + 1009443 ATTAAAAAAAAAAA-AGAAAATTCCTGGTA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=4594.000000 s hg38.chr16_GL383557v1_alt 37248 3 + 89672 AGG s panTro5.chr16 21463512 3 - 81586097 AGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530323 3 - 90481686 AGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763172 3 + 3010529 AGG i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518631 3 - 44557958 AGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6323374 3 + 6628207 AGA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690260 3 + 13852661 AGT i otoGar3.GL873566 I 258 C 0 s mm10.chr8 22459843 2 - 129401213 Ag- i mm10.chr8 I 1 I 1347 s canFam3.chr5 80455672 3 + 88915250 AGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916290 3 + 1009443 AGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=89230.000000 s hg38.chr16_GL383557v1_alt 37251 51 + 89672 TATTTCTTCTACTCCAAATGAAAAATTAAAAATTTTC-CCT-AAAAATCAAGA s panTro5.chr16 21463515 51 - 81586097 TATTTCTTCTAGTCCAAATGAAAAATTAAAAATTTTC-CCT-AAAAATCAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530326 50 - 90481686 TATTTCTTCTAGTCCAAATG-AAAATTAAAAATTTTC-CCT-AAAAATCAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763175 51 + 3010529 TATTTCTTCCAGTCCAAATGAAAAATTAAAAATTTTC-TCT-AAAAATCAAGA i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518634 51 - 44557958 TAGTT-TTCCAGCCtaaattaaaaattaaaaattttC-CCTAAAAAATCAAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6323377 51 + 6628207 CAGTT-TTCTAGCCTAAATTAAAAATTCAAAATTTTC-CCTAAAAAATCAAGA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690263 51 + 13852661 TATTTCCTCTTGCCCAAAGGAAACACTAAGTTTTCCT-CCT-AAAAATCAAAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455675 49 + 88915250 CTTTTCCTTATGCCCAAAG--AACATTAACATTTTCC-TCT-AAAAATCAAGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 916293 52 + 1009443 GTCTTCCTCTTGCCGAAAGGAAATATTAAAATTTCTCACCT-AAAAATCAAGA i dasNov3.JH569970 C 0 I 2311 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=206637.000000 s hg38.chr16_GL383557v1_alt 37302 134 + 89672 GAAATTC-tgagaccttcagtaactcatttaactttggtgaaactcagttttaatcatttatacaacaaatataaacagcc---tatctcagaggactgaataaaaatccaaagagaaaatatagatatagATATAGA s panTro5.chr16 21463566 128 - 81586097 GAAATTC-tgagaccttcagtaactcatttaactttggtgaaactcagttttaatcatttatacaacaaatataaatagcc---tatctcagaggactgaataaaaatccaaagagaa------gatatagatataga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530376 128 - 90481686 GAAATTC-tgagaccttcagtaactcatttaactttggtgaaactcagttttaatcatttatacaacaaatataaacagcc---tatctcagaggactgAATAAAAATCCAAAGAGAA------GATATAGATATAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763226 134 + 3010529 GAAATTC-tgagaccttcagtaactcatttaactttggtgaaactcagttttaatcatttgtacaacaaatataaacagcc---tatctcagaggactgaataaaaatccaaagagaaaatatagatatagatataga i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518685 129 - 44557958 GAAATTCTTGAGACCTTCAGTAACTCATTTAACTTTGGTAAAACTTAATTGAAATCATTTATACAACAAATATAAACAGCC---TACCTCAGAGGACTATATAAAGATCCAATGAGAA------AATATAGATATAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6323428 129 + 6628207 GAAATTCTtgagaccttcagtaactcatttaactttggtaaaactcaattttaatcatttatacaacaaatataaacagcc---tacctcagaggactgtataaagatccaatgagaa------aatacagatatagA i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690314 90 + 13852661 CAAATCT-TGAGACCTTCAGTAATTTA-CTAACTTTAGTGAACCTCAGTTTAA-----------------------------------TCAAAAGATTGTATAAAAATCAAATGAGAA------AATACAAAT----- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455724 135 + 88915250 GAAATTC-TGAGACCTTTAGTAACTCACCTAACTTTAATGAGCTATAGTGT-AATCG-TTGTAAAACAAAGATAAACAGCCCATCATCTCCAAGGACTGTGGAAAGGTCAAACAAGAATATACAGATAAAAATGCAGA i canFam3.chr5 C 0 I 1 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=259278.000000 s hg38.chr16_GL383557v1_alt 37436 255 + 89672 CAggccaggtgcattggctcatgcctataatcccaacactgtgagaggctatgacgggaggattgcttgagcccaggagctccagaccagcctgggcaacatagtgagaccctgtctctacaaaaaacaaaaaataaaaataaaaacattagcca--ggctgggtgcagtggctcacacctgtaatcccaacactttgggaggctgaggtgggcggatcac--aaggtcaggagatcaaga-------------------------------ccaacctggttaagatgg s panTro5.chr16 21463694 254 - 81586097 taggccaggtgcattggctcatgcctataatcccaactcttcgagaggctatgacgggaggattgcttgagcccaggagctccagaccagcctgggcaacatagtgagaccctgtctctacaaaaa-caaaaaataaaaataaaaacattagcta--ggctgggtgcagtggctcacacctgtaatcccaacactttgggaggctgaggtgggcagatcac--aaggtcaggagatcaaga-------------------------------ccaacctggttaagatgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530504 241 - 90481686 TAggccaggtgcattggctcatgcctataatcccaactcttcgagaggctatgacgggaggattgcttgagcccaggagctccagaccagcctgggcaacatagtgagaccctgtctctacaaaaa---------------TAAAACATTAGCTA--ggctgggtgcagtggctcacacctgtaatcccaacactttgggaggctgaggtgggcagatcac-aaaggtcaggagatcaaga-------------------------------ccaacctggttaagatgg i panPan2.chr16 C 0 M 47 s gorGor5.CYUI01000018v1 763360 255 + 3010529 taggccaggtgcattggctcatgcctataatcccaacattttgagaggctatgacgggaggattgcttgagcccaggagctccagaccagcctgggcaacagagtgagaccctgtctctacaaaaaacaaaaaataaaaataaaaacattagcca--ggctgggtgcagtggctcacacctgtaatcccaacactttgggaggctgaggtgggcagatcac--aaggtcaggagatcaaga-------------------------------ccaacctggttaagatgg i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21518814 276 - 44557958 CAggccaggggcattggctcatgcctgtaatcctaacactttgagaggttatgacaggaggattgcttgagcccaggagctccagaccagactggacaacataatgaggccc-gtctctacaaaaaacaaacaataaaaataaaaacattagttg--gcatg------gtcgtgcacacctgtagtcccactac-ttaggaggctgaggtgggaggatcacttgagcccaagaggt----gctgtagtgaactgtaatcacaccactgcactccagcctgggtgacagag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6323557 280 + 6628207 CAggccaggggcattggctcatgcctgtaatcctaacactttgagaggttatgacaggaggattgcttgagcccaggagctccagaccagcctgggcaacataatgaggcct-gtctctacaaaaaacaaaaaataaaaataaaaacattagtca--gcatg------gtggtgcacacctgtagtcccactac-ttaggaggctgaggtgggaggatcacttgagcccaagaggttgaggctgtagtgaactgtgatcacaccactgcactccagcctgggcaacagag i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690404 147 + 13852661 -------------------------------------------------CAAAATGTAAAGATAATTT------------------------------------TAAAATCC-------------------------AGATAAAAATATAAGGCAATGGCTCTgtgtggtggctcatgcctataatccta-cactctcggaggctgaggtggttggaccacttgagctctggaatttgtga-------------------------------ccaacttgagcaaagcg- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=79158.000000 s hg38.chr16_GL383557v1_alt 37691 102 + 89672 tgaaaccccgtctctacta----aaaatacaaaa---aaaa-a-----attagctgggcatggtggcatgcgcctgtagtcccagctactcaggaggctgaggcaggagaatcac s panTro5.chr16 21463948 102 - 81586097 tgaaaccccgtctctacta----aaaatacaaaa---aaaa-a-----attagctgggcatggtggcatgcgcctgtagtccgagctactcaggaggctgaggcaggagaatcac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763615 103 + 3010529 tgaaaccccgtctctacta----aaaatacaaaa---aaaaca-----attagctgggcatggtggcatgcacctgtagtcccagctactcaggaggctgaggcaggagaatcac i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21519090 114 - 44557958 agaggccctgtctcaaataaaataaaaTGCGTAATTTAAAA-ATCCTTATTAgctgggcacagtggctcacgcctgtaaccccagcactttgggaggctgaggtggatggatcac i calJac3.chr20 C 0 I 38 s saiBol1.JH378225 6323837 114 + 6628207 agaggccctgtctcaaataaaacaaaaTGCGTAATTTAAAA-ATCCTTATTAgctgggcacgatggctcacgcctgtaattccagcacttggggaggccgaggtatatggatcac i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690551 95 + 13852661 -agacccccgtctctact-----aaaata--------gaaa-a-----attagacaagcacggtggcacacagttgtagtcccagctacttgggagcatgaggcaggaggatcgc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=12616.000000 s hg38.chr16_GL383557v1_alt 37793 53 + 89672 ttgaa-----cctgggaggcagaggttgcagtgagctgagatcacgccattgcactcc s panTro5.chr16 21464050 53 - 81586097 ttgaa-----cctgggaggcagaggttgcagtgagctgagatcacgccattgcactcc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763718 53 + 3010529 ttgaa-----cctgggaggtggaggttgcagtgagcccagaatgcaccactgcactcc i gorGor5.CYUI01000018v1 C 0 I 7 s saiBol1.JH378225 6323951 24 + 6628207 ---------------------gaggt--caggaggtcgagacca-gcc---------- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690646 58 + 13852661 ttgagtgaaccctaggcgtttgaggttgctgtgagctatgctgaggccatagcactct i otoGar3.GL873566 C 0 I 9 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e calJac3.chr20 21519204 38 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=-1765.000000 s hg38.chr16_GL383557v1_alt 37846 13 + 89672 gacagagtg--------------------------------------tagt s panTro5.chr16 21464103 13 - 81586097 gacagagtg--------------------------------------tagt i panTro5.chr16 C 0 C 0 s saiBol1.JH378225 6323975 4 + 6628207 -----------------------------------------------tggt i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690713 51 + 13852661 aacaaagtgagTCTAAGACATGAGGTAAGAGAAGGCAGGGGAGGAACTACT i otoGar3.GL873566 I 9 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e calJac3.chr20 21519204 38 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M e gorGor5.CYUI01000018v1 763771 7 + 3010529 I a score=1051.000000 s hg38.chr16_GL383557v1_alt 37859 11 + 89672 gtgacagagca------- s panTro5.chr16 21464116 11 - 81586097 gtgacagagca------- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763778 11 + 3010529 gtgacagagca------- i gorGor5.CYUI01000018v1 I 7 C 0 s saiBol1.JH378225 6323979 10 + 6628207 -caatatggtg------- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690764 18 + 13852661 TTGGGGGAGTAaacatcg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e calJac3.chr20 21519204 38 - 44557958 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=13187.000000 s hg38.chr16_GL383557v1_alt 37870 12 + 89672 agactccgtctc s panTro5.chr16 21464127 12 - 81586097 agactccgtctc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763789 12 + 3010529 agactccgtctc i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21519242 12 - 44557958 aaaccccgtctc i calJac3.chr20 I 38 I 1 s saiBol1.JH378225 6323989 12 + 6628207 aaaccctgtctc i saiBol1.JH378225 C 0 I 1 s otoGar3.GL873566 13690782 12 + 13852661 aaactccatttc i otoGar3.GL873566 C 0 I 1 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e macFas5.chr20 21058200 13 - 78541002 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=6812.000000 s hg38.chr16_GL383557v1_alt 37882 7 + 89672 aaaaaaa s panTro5.chr16 21464139 7 - 81586097 aaaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763801 7 + 3010529 aaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s macFas5.chr20 21058213 6 - 78541002 -aacaaa i macFas5.chr20 I 13 I 1 s calJac3.chr20 21519255 7 - 44557958 actaaaa i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6324002 7 + 6628207 actaaaa i saiBol1.JH378225 I 1 C 0 s otoGar3.GL873566 13690795 7 + 13852661 aataaaa i otoGar3.GL873566 I 1 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e colAng1.NW_012123265v1 515062 41 + 3907144 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=1247.000000 s hg38.chr16_GL383557v1_alt 37889 4 + 89672 aaaa- s panTro5.chr16 21464146 4 - 81586097 aaaa- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763808 4 + 3010529 aaaa- i gorGor5.CYUI01000018v1 C 0 I 8 s macFas5.chr20 21058220 3 - 78541002 -aaa- i macFas5.chr20 I 1 C 0 s colAng1.NW_012123265v1 515103 3 + 3907144 -aaa- i colAng1.NW_012123265v1 I 41 C 0 s calJac3.chr20 21519262 3 - 44557958 -ata- i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6324009 3 + 6628207 -ata- i saiBol1.JH378225 C 0 I 1 s otoGar3.GL873566 13690802 4 + 13852661 -ataa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e panPan2.chr16 21530745 47 - 90481686 M e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=5136.000000 s hg38.chr16_GL383557v1_alt 37893 4 + 89672 aa----aa s panTro5.chr16 21464150 8 - 81586097 aacaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530792 4 - 90481686 ----aaaa i panPan2.chr16 M 47 C 0 s gorGor5.CYUI01000018v1 763820 8 + 3010529 aaaaaaaa i gorGor5.CYUI01000018v1 I 8 C 0 s macFas5.chr20 21058223 4 - 78541002 ----caaa i macFas5.chr20 C 0 I 1 s colAng1.NW_012123265v1 515106 4 + 3907144 ----aaaa i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21519266 4 - 44557958 ----aaaa i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6324013 4 + 6628207 ----aaaa i saiBol1.JH378225 I 1 C 0 s otoGar3.GL873566 13690806 4 + 13852661 ----aaaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e rheMac8.chr20 21348064 28 - 74971481 I e manLeu1.NW_012101698v1 6763068 20 - 7209941 I e chlSab2.chr5 58215469 38 + 75399963 I e cerAty1.NW_011999143v1 20777597 20 + 43916225 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=877501.000000 s hg38.chr16_GL383557v1_alt 37897 162 + 89672 attagccg-gcatggcggtgcacacctgtagtcctg-ctacttaggaggctgaggtgggaggattgcttgag---cccaagaggttgaggctgcagtgaactgtgatcacgccactacactccagtttgggcaacggagagaggccctgtctca---aaataaataaaaT s panTro5.chr16 21464158 162 - 81586097 attagccg-gcatggcagtgcacacctgtagtcctg-ctacttaggaggctgaggtgggaggatcgcttgag---cccaagaggttgaggctgcagtgaactgtgatcacgccactacactccagtttgggcaacggagagaggccctgtctca---aaataaataaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530796 162 - 90481686 attagccg-gcatggcagtgcacacctgtagtcctg-ctacttaggaggctgaggtgggaggatcgcttgag---cccaagaggttgaggctgcagtgaactgtgatcacgccactacactccagtttgggcaacggagagaggccctgtctca---aaataaataaaaT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763828 162 + 3010529 attagccg-gcatggcattgcacacctgtagtcctg-ctacttaggaggctgaggtgggaggatcacttgag---cccaagaggttgaggctgcagtgaactgtgatcacgccactacactccagtttgggcaacggagagaggccctgtctca---aaataaataaaat i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348092 162 - 74971481 aTTAGCTA-gcattgcggtgcacatctgtagtccca-ctacttaggaggctgaggtgggaggaacgcttgag---cacaagaggttgaggctgcagtgaactgtgatcgtaccactacactccagtctgggcaacagagagaggccttgtctca---aaataaataaaaT i rheMac8.chr20 I 28 C 0 s macFas5.chr20 21058228 162 - 78541002 attagcta-gcattgcggtgcacatctgtagtccca-ctacttaggaggctgaggtgggaggaacgcttgag---cacaagaggttgaggctgcagtgaactgtgatcgtaccactacactccagtctgggcaacagagagaggccttgtctca---aaataaataaaaT i macFas5.chr20 I 1 C 0 s cerAty1.NW_011999143v1 20777617 162 + 43916225 attagcta-gcattgcggtgcacatctgtagtccca-ctacttaggaggctgaggtgggaggatcgcttgag---cccaagaggttgaggctgcagtgaactgtgatcgtaccactacactccagtctgggcaacagagagaggccttgtctca---aaataaataaaaT i cerAty1.NW_011999143v1 I 20 C 0 s chlSab2.chr5 58215507 162 + 75399963 attagcta-gcattgcggtgcacatctgcagtccca-ctacttaggaggctgaggtgggaggatcgcttgag---cccaagaggttgaggctgcagtgaactgtgatcgtaccactacactccagtctgggcaacagagagaggccttgtttca---aaataaataaaaT i chlSab2.chr5 I 38 C 0 s manLeu1.NW_012101698v1 6763088 162 - 7209941 attagcta-gcattgcggtgcacatctgtagtccca-ctacttaggaggctgaggtgggaggatcgcttgag---cccaagaggttgaggctgcagtgaactgtgatcataccactacactccagtctgggcaacagagagaggccttgtctca---aaataaataaaaT i manLeu1.NW_012101698v1 I 20 C 0 s colAng1.NW_012123265v1 515111 162 + 3907144 attagcca-gcatggcggtgcacatctgcagtccca-ctacttaggaggctgaggtgggaggatcgcttgag---cccaagaggttgaggctgcagtgaactgtgatcgtaccactacgctccagtctgggcaacagagagaggccttgtctca---aaaaaaacaaaaT i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21519270 166 - 44557958 attagctgggcatggtggtgtacgcctttagtcccagctacttgggaggctgaagcaggagaattgcttgaattgcttgggaggcggaggttgcagtgagccaagatcatgtcactacattccagcctgagtgacagagcaagactccatctcaaataaataaata---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324017 166 + 6628207 agtagccaggcatggtggtgcacgcctttagtcccagctacttgggaggctgaggcaggagaattgcttgaa---cttgagaggcagaggttgcagtgagccgagatcatgtcactgtactccagcctgggtgacagagcaagactccatctcaaataaataaata-aat i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13690810 154 + 13852661 attaacctgggattgcagtgggtgcccgtagttccagctagttaggaggctaaggc---aggattgcttgag---cccatgagcttgagg-------gaactagggtgaggccacagtactctagcctgggtaatagagtgggactctgtctca---aaataaaaaaaGT i otoGar3.GL873566 C 0 I 638 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=7550.000000 s hg38.chr16_GL383557v1_alt 38059 2 + 89672 GC s panTro5.chr16 21464320 2 - 81586097 gc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530958 2 - 90481686 GC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763990 2 + 3010529 gc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348254 2 - 74971481 GC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058390 2 - 78541002 GC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20777779 2 + 43916225 GC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215669 2 + 75399963 GC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763250 2 - 7209941 GC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515273 2 + 3907144 GC i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6324183 2 + 6628207 aa i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80455859 1 + 88915250 I e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e calJac3.chr20 21519436 0 - 44557958 C e otoGar3.GL873566 13690964 638 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=6006.000000 s hg38.chr16_GL383557v1_alt 38061 1 + 89672 A s panTro5.chr16 21464322 1 - 81586097 a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530960 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763992 1 + 3010529 a i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348256 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058392 1 - 78541002 A i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20777781 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215671 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763252 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515275 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6324185 1 + 6628207 a i saiBol1.JH378225 C 0 C 0 s canFam3.chr5 80455860 1 + 88915250 A i canFam3.chr5 I 1 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2930613 867 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e calJac3.chr20 21519436 0 - 44557958 C e otoGar3.GL873566 13690964 638 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=48113.000000 s hg38.chr16_GL383557v1_alt 38062 6 + 89672 TAATTT s panTro5.chr16 21464323 6 - 81586097 taattt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530961 6 - 90481686 TAATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763993 6 + 3010529 taattt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348257 6 - 74971481 TAATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058393 6 - 78541002 TAATTT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20777782 6 + 43916225 TAATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215672 6 + 75399963 TAATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763253 6 - 7209941 TAATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515276 6 + 3907144 TAATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519436 5 - 44557958 -aaTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324186 6 + 6628207 taaTTT i saiBol1.JH378225 C 0 C 0 s proCoq1.NW_012152729v1 2931480 6 + 9850184 taattt i proCoq1.NW_012152729v1 I 867 C 0 s canFam3.chr5 80455861 6 + 88915250 TAATTT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e macNem1.NW_012011355v1 14454138 516 + 26466322 I e otoGar3.GL873566 13690964 638 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=9555.000000 s hg38.chr16_GL383557v1_alt 38068 1 + 89672 T s panTro5.chr16 21464329 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530967 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 763999 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348263 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058399 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454654 1 + 26466322 T i macNem1.NW_012011355v1 I 516 C 0 s cerAty1.NW_011999143v1 20777788 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215678 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763259 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515282 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519441 1 - 44557958 T i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6324192 1 + 6628207 T i saiBol1.JH378225 C 0 I 2 s proCoq1.NW_012152729v1 2931486 1 + 9850184 t i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80455867 1 + 88915250 T i canFam3.chr5 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e cebCap1.NW_016107433v1 3306536 1939 - 5917169 I e otoGar3.GL873566 13690964 638 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=105211.000000 s hg38.chr16_GL383557v1_alt 38069 12 + 89672 AAAATCCTGATT s panTro5.chr16 21464330 12 - 81586097 aaaatcctgatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530968 12 - 90481686 AAAATCCTGATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764000 12 + 3010529 aaaatcctgatt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348264 12 - 74971481 AAAATCCTGATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058400 12 - 78541002 AAAATCCTGATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454655 12 + 26466322 AAAATCCTGATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777789 12 + 43916225 AAAATCCTGATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215679 12 + 75399963 AAAATCCTGATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763260 12 - 7209941 AAAATCCTGATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515283 12 + 3907144 AAAATCCCGATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519444 12 - 44557958 AAAATCCTTATT i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6324195 12 + 6628207 TAAATCCTTATT i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3308475 12 - 5917169 aaaaTCCTTATT i cebCap1.NW_016107433v1 I 1939 C 0 s proCoq1.NW_012152729v1 2931487 12 + 9850184 aaaatccagata i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80455868 12 + 88915250 AAAATGCTGAAA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54921355 874 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e otoGar3.GL873566 13690964 638 + 13852661 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=162103.000000 s hg38.chr16_GL383557v1_alt 38081 15 + 89672 AAAATGTAAGACATT s panTro5.chr16 21464342 15 - 81586097 aaaatgtaagacatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530980 15 - 90481686 AAAATGTAAGACATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764012 15 + 3010529 aaaatgtaagacatt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348276 15 - 74971481 AAAATGTAAGGCATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058412 15 - 78541002 AAAATGTAAGGCATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454667 15 + 26466322 AAAATGTAAGGCATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777801 15 + 43916225 AAAATGTAAGGCATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215691 15 + 75399963 AAAATGTAAGGCATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763272 15 - 7209941 AAAATGCAAGGCATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515295 15 + 3907144 AAAATGTAAGGCATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519456 15 - 44557958 AAAATGTAAAGCATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324207 15 + 6628207 AAAATGTAAAGCATT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3308487 15 - 5917169 AAAATGTAAAGCATT i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54922229 15 + 72247402 AAAACGTAAGGTATT i micMur3.chr20 I 874 C 0 s proCoq1.NW_012152729v1 2931499 15 + 9850184 aaaatgtaaggcatc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13691602 15 + 13852661 AAAAAGCAAGGCACC i otoGar3.GL873566 I 638 C 0 s canFam3.chr5 80455880 9 + 88915250 AAAAAGTAA------ i canFam3.chr5 C 0 C 0 e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9268238 1149 - 10531588 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=539257.000000 s hg38.chr16_GL383557v1_alt 38096 40 + 89672 ATTATAC------TATTTAGTGGAAGACGCAAGCAAGCAGCATTAT s panTro5.chr16 21464357 40 - 81586097 attatAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21530995 40 - 90481686 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764027 40 + 3010529 attatAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21348291 40 - 74971481 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058427 40 - 78541002 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454682 40 + 26466322 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777816 40 + 43916225 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215706 40 + 75399963 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763287 40 - 7209941 ATTATAC------TATTTAGTGGAAGATGCAAGCAAGCAGCATTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515310 40 + 3907144 ATTATAC------TATTTAGCGGAAGATGCAAGCAAGCAGCATTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519471 40 - 44557958 ATTATAC------TATTTATTGGAAGATGCAAGCAAACAGCATTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324222 40 + 6628207 ATTATAC------TATTTATTGGAAGATGCAAGGAAACAGCATTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3308502 40 - 5917169 ATTATAC------TATTTATTGGAAGATGCAAGCAAACAGCATTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9269387 40 - 10531588 ATTATAT------TATTTATTGGAAGATGCAAGCAAACAGCATTAT i aotNan1.NW_018500622v1 I 1149 C 0 s micMur3.chr20 54922244 40 + 72247402 ATTATAC------CATTTAATGGAAAATGCAAGCAAGCGGCATTAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2931514 40 + 9850184 attatAC------TATTTAATGGAACATGCAAGCAAGCAGCCTTAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13691617 46 + 13852661 ATTATACTACAGGTATTTCATGGAAAGTACAACTAAGTAGCACTGT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455889 36 + 88915250 ----TGC------TATTTAGTGGAAAATGCAAGTAAGCGGCATCAT i canFam3.chr5 C 0 C 0 e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e nomLeu3.chr2 53873836 1141 + 163208435 M a score=201640.000000 s hg38.chr16_GL383557v1_alt 38136 13 + 89672 TTGTTGTCCAGTT s panTro5.chr16 21464397 13 - 81586097 TTGTTGTCCAGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531035 13 - 90481686 TTGTTGTCCAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764067 13 + 3010529 TTGTTGTCCAGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53874977 13 + 163208435 TTGTTGTCCACTT i nomLeu3.chr2 M 1141 C 0 s rheMac8.chr20 21348331 13 - 74971481 TTGTTGTCCAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058467 13 - 78541002 TTGTTGTCCAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454722 13 + 26466322 TTGTTGTCCAGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777856 13 + 43916225 TTGTTGTCCAGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215746 13 + 75399963 TTGTTGTCCAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763327 13 - 7209941 TTGTTGTCCAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515350 13 + 3907144 TTGTTGTCCAGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519511 13 - 44557958 TTGTTGTCCAGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324262 13 + 6628207 TTGTTGTCCAGTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3308542 13 - 5917169 TTGTTgtccagtt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9269427 13 - 10531588 TTGTTGTCCAGTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54922284 13 + 72247402 TTGTTGTTCAGTT i micMur3.chr20 C 0 I 1748 s proCoq1.NW_012152729v1 2931554 13 + 9850184 TTGTTGTTCAgtt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13691663 13 + 13852661 TTGTTGCTCAGTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455925 12 + 88915250 ACGCTGT-CAGTT i canFam3.chr5 C 0 C 0 e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I a score=620433.000000 s hg38.chr16_GL383557v1_alt 38149 55 + 89672 GGTTACCACAGTG-TACTAACCTAGCCAGGAGCACTGATTGGATCCTCGAATAGTC s panTro5.chr16 21464410 55 - 81586097 GGTTACCACAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531048 55 - 90481686 GGTTACCACAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764080 55 + 3010529 GGTTACCACAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53874990 51 + 163208435 GGTTACCACAGTA-TACTAACCTAGCCAGGAACAC----TGGATCCTCGAAAAGTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348344 53 - 74971481 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCCAATAGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058480 53 - 78541002 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454735 53 + 26466322 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777869 53 + 43916225 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215759 53 + 75399963 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTTGAATAGTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763340 53 - 7209941 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCGAATAGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515363 53 + 3907144 AGTTAC--CAGTG-TACTAACCTAGCCAGGAACACTGATTGGATCCTCAAATAGTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519524 55 - 44557958 AGTTACCACAGTG-TGCTAACCTAGCCAGGAACACTGACTGGATCCTCAAATAGTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324275 55 + 6628207 AGTTACCACAGTG-TGCTAACCTAGCCAGGAACACTGATTGGATCCTCAAATAGTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3308555 55 - 5917169 agttaccacagtg-tgctaacctagccaggaaaactgattggatcctcaaatagtc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9269440 55 - 10531588 A-TTATCACGATGTTGGTAACCTAGCCAGGAACACTGATTGGATCCTCAAATAGTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2931567 51 + 9850184 ----agcatagtg-tgctaacctagtcaagaacactaactggatccttggatagtc i proCoq1.NW_012152729v1 C 0 I 1438 s otoGar3.GL873566 13691676 50 + 13852661 AGTTAGCACAGTG-TGCTAACCTAGCCAAGAACAC-----ACATCCTTGAACACTA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455937 55 + 88915250 AGTTAGGATAGAA-TGTAAATCTAGCCAGGAACAACGGCGGAACACTTCCACAGCC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I a score=10285.000000 s hg38.chr16_GL383557v1_alt 38204 1 + 89672 A s panTro5.chr16 21464465 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531103 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764135 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875041 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348397 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058533 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454788 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777922 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215812 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763393 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515416 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519579 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324330 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3308610 1 - 5917169 a i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9269495 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13691726 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80455992 1 + 88915250 A i canFam3.chr5 C 0 I 1483 e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I a score=255759.000000 s hg38.chr16_GL383557v1_alt 38205 24 + 89672 GTTGAGAACAGCAAAACACTGTTc s panTro5.chr16 21464466 24 - 81586097 GTTGAGAACAGCAAAACACTGTTc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531104 24 - 90481686 GTTGAGAACAGCAAAACACTGTTc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764136 24 + 3010529 GTTGAGAACAGCAAAACACTGTTc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875042 24 + 163208435 GCTGATAACAGCAAAACACTGTTc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348398 24 - 74971481 GCTGAGAACAGCAAAACACTGTTc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058534 24 - 78541002 GCTGAGAACAGCAAAACACTGTTc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454789 24 + 26466322 GCTGAGAACAGCAAAACACTGTTc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777923 24 + 43916225 GCTGAGAACAGCAAAACACTGTTc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215813 24 + 75399963 GCTGAGAACAGCAAAACACTGTTc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763394 24 - 7209941 GCTGAGAACAGCAAAACACTGTTc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515417 24 + 3907144 GCTGAGAACAGCAAAACACTGTTc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519580 24 - 44557958 GCTGAGAAGAGCAAAACACTGTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324331 24 + 6628207 GCTGAGAAGAGTAAAACACTGTTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3308611 24 - 5917169 gctgagaagagcaaaacactgttc i cebCap1.NW_016107433v1 C 0 I 2777 s aotNan1.NW_018500622v1 9269496 24 - 10531588 GCTGGAGAGAGCAAAACACTGTTC i aotNan1.NW_018500622v1 C 0 I 2672 s otoGar3.GL873566 13691727 21 + 13852661 GCTCAGAACAG---ATCAATATTC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I a score=24487.000000 s hg38.chr16_GL383557v1_alt 38229 3 + 89672 tac s panTro5.chr16 21464490 3 - 81586097 tac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531128 3 - 90481686 tac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764160 3 + 3010529 tac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875066 3 + 163208435 tac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348422 3 - 74971481 tac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058558 3 - 78541002 tac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454813 3 + 26466322 tac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777947 3 + 43916225 tac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215837 3 + 75399963 tac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763418 3 - 7209941 tac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515441 3 + 3907144 tac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519604 3 - 44557958 TAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6324355 3 + 6628207 CAT i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13691748 3 + 13852661 TAC i otoGar3.GL873566 C 0 I 3590 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9269520 2672 - 10531588 I e cebCap1.NW_016107433v1 3308635 2777 - 5917169 I a score=18563.000000 s hg38.chr16_GL383557v1_alt 38232 3 + 89672 tgc s panTro5.chr16 21464493 3 - 81586097 tgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531131 3 - 90481686 tgc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764163 3 + 3010529 tgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875069 3 + 163208435 ttc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348425 3 - 74971481 tgc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058561 3 - 78541002 tgc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454816 3 + 26466322 tgc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777950 3 + 43916225 tgc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215840 3 + 75399963 tgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763421 3 - 7209941 tgc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515444 3 + 3907144 tgc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21519607 3 - 44557958 AGC i calJac3.chr20 C 0 I 3609 s saiBol1.JH378225 6324358 3 + 6628207 AGC i saiBol1.JH378225 C 0 I 4386 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9269520 2672 - 10531588 I e cebCap1.NW_016107433v1 3308635 2777 - 5917169 I e otoGar3.GL873566 13691751 3590 + 13852661 I a score=177870.000000 s hg38.chr16_GL383557v1_alt 38235 30 + 89672 actccagctaagcaacagagcgagactctg s panTro5.chr16 21464496 30 - 81586097 actccagctaagcaacagagcgagactctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531134 30 - 90481686 actccagctaagcaacagagcgagactctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764166 30 + 3010529 actccaactaagcaacagagcgagactccg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875072 30 + 163208435 actccagctaagcaacagagcgagactcca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348428 30 - 74971481 actccagctaagcaacagagtgagactcca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058564 30 - 78541002 actccagctaagcaacagagtgagactcca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454819 30 + 26466322 actccagctaagcaacagagcgagactcca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777953 30 + 43916225 actccagctaagcaacagagcgagactcca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215843 30 + 75399963 actccagctaagcaacagagcgagactcca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763424 30 - 7209941 actccagctaagcaacagagcgagactcca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515447 30 + 3907144 actccagctaagcaacagagcgagactccg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9269520 2672 - 10531588 I e cebCap1.NW_016107433v1 3308635 2777 - 5917169 I e saiBol1.JH378225 6324361 4386 + 6628207 I e calJac3.chr20 21519610 3609 - 44557958 I e otoGar3.GL873566 13691751 3590 + 13852661 I a score=221570.000000 s hg38.chr16_GL383557v1_alt 38265 23 + 89672 t---------------------------ttATTTATTTATTGGCAGCGTT s panTro5.chr16 21464526 45 - 81586097 tctc-aaaTATTTTATTTAC----TTATTTATTTATTTATTGGCAGCGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531164 45 - 90481686 tctc-aaaTATTTTATTTAC----TTATTTATTTATTTATTGGCAGCGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764196 45 + 3010529 tctc-aaaTATtttatttac----ttatttatttatttattGGCAGCGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875102 50 + 163208435 tctcaaaaTATtttatttacttatttatttatttatttattGGCAGTGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348458 46 - 74971481 tctcaaaatatttcatttac----ttattcatttatttattGGCAGCGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058594 46 - 78541002 tctcaaaatatttcatttac----ttattcatttatttattGGCAGCGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454849 46 + 26466322 tctcaaaatatttcatttac----ttattcatttatttattGGCAGCGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20777983 46 + 43916225 tctcaaaatatttcatttac----ttattcatttatttattGGCAGCGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215873 46 + 75399963 tctcaaaatatttcatttac----ttattcatttatttattGGCAGCGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763454 46 - 7209941 tctcaaaatatttcatttac----ttattcatttatttattggcagcgtt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515477 46 + 3907144 tctcaaaatatttcatttac----ttatttatttatttattGGCAGCGTT i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3311412 23 - 5917169 ---------------------------tttatttatttatttgcagcatt i cebCap1.NW_016107433v1 I 2777 I 4 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e aotNan1.NW_018500622v1 9269520 2672 - 10531588 I e saiBol1.JH378225 6324361 4386 + 6628207 I e calJac3.chr20 21519610 3609 - 44557958 I e otoGar3.GL873566 13691751 3590 + 13852661 I a score=41340.000000 s hg38.chr16_GL383557v1_alt 38288 5 + 89672 tctgt s panTro5.chr16 21464571 5 - 81586097 tctgt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531209 5 - 90481686 tctgt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764241 5 + 3010529 tctgt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875152 5 + 163208435 tctgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348504 5 - 74971481 tctgt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058640 5 - 78541002 tctgt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454895 5 + 26466322 tctgt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778029 5 + 43916225 tctgt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215919 5 + 75399963 tctgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763500 5 - 7209941 tctgt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515523 5 + 3907144 TCTAT i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3311439 5 - 5917169 tctgt i cebCap1.NW_016107433v1 I 4 C 0 s aotNan1.NW_018500622v1 9272192 5 - 10531588 tctgt i aotNan1.NW_018500622v1 I 2672 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e saiBol1.JH378225 6324361 4386 + 6628207 I e calJac3.chr20 21519610 3609 - 44557958 I e otoGar3.GL873566 13691751 3590 + 13852661 I a score=1889623.000000 s hg38.chr16_GL383557v1_alt 38293 282 + 89672 tcacccaggctgaaatgcagtggtgcaatcatggctccctgcagcct-caacctcctggggtcatgtgat----ccacctcagcctctcaagtagctgggactacaat--tgcgccactacacccagctaa----ttgt---tttattta-ttttttttttgaagtttttgtacagatagggtcttgctatgttgcccaggcttgtctcgaactc--agcctcaaatgatcttcctgctttggtctcccaaagtgctggattacaggcatgagccaccacacttggttt----------ttc-ttttttt s panTro5.chr16 21464576 282 - 81586097 tcacccaggctggaatgcagtggtgcaatcatggctccctgcagcct-caacctcctggggtcatgtgat----ccacctcagcctctcaagtagctgggactacaat--tgcgccactacacccagctaa----ttgt---tttatcta-ttttttttttgaagtttttgtacagatagggtcttgctatgttgcccaggcttgtcttgaactc--agcctcaaatgatcttcctgctttggtctcccaaagtgctggattacaggcatgagccaccacacttggttt----------ttc-ttttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531214 281 - 90481686 tcacccaggctggaatgcagtggtgcaatcatggctccctgcagcct-caacctcctggggtcatgtgat----ccacctcagcctctcaagtagctgggactacaat--tgcgccactacacccagctaa----ttgt---tttatcta--tttttttttgaagtttttgtacagatagggtcttgctatgttgcccaggcttgtctcgaactc--agcctcaaatgatcttcctgctttggtctcccaaagtgctggattacaggcatgagccaccacacttggttt----------ttc-ttttttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764246 284 + 3010529 tcacccaggctggaatgcagtggtgcaatcatggctccctgcagcct-caacctcctggggtcatgtgatcctcccacctcagcctctcaagtagctgggactacaat--tgcaccactacacccagctaa----ttg----tttattta---ttttttttgaagtttttgtacagatagggtcttgttatgttgcccaggcttgtctcgaactc--agcctcaaatgatcttcctgctttggtctcccaaagtgctggattacaggcatgagccaccacacttggttt----------ttctttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875157 286 + 163208435 tcacccaggctggagtgcagtggtgcaatcatggctccctgcagcct-caacctcctggggtcatgcgatcctcccacctcagcctctcaagtagctggcactacaac--tgcaccactacactcagctaa----ttgt---tttacttatttttttttttcaagtttttgtacagacagggtcttgttatgttgcctaggcttgtcttgaactcttagcctcaaatgatcttcctgctttggtctcccaaagtgctggattacaggcatgagccaccacacttggctt----------ttt-tttt--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348509 279 - 74971481 tcacccagcctggagtgcagtggtgcaatcatggctccctgcagcct-caacct-ctggggtcatgcgatcctcccacctcagactctcaagtagctgggactacaat--tgcgccactacacccagctag----ttgtttgtttgtttg--tttgtttttcaattttttgtacagacagggtctcgttatgccgccccggcttgtgtcaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggattacaggcattagctaccacacttggctt--------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058645 279 - 78541002 tcacccagcctggagtgcagtggtgcaatcatggctccctgcagcct-caacct-ctggggtcatgcgatcctcccacctcagactctcaagtagctgggactacaat--tgcgccactacacccagctag----ttgtttgtttgtttg--tttgtttttcaattttttgtacagacagggtctcgttatgccgccccggcttgtgtcaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggattacaggcattagctaccacacttggctt--------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14454900 281 + 26466322 tcacccagcctggagtgcagtggtgcaatcatggctccctacagcct-caacct-ctggggtcatgcgatcctcccacctcagactctcaagtagctgggactacaat--tgcgccactacacccagctagttgtttgtttgtttgtttg--tttgtttttcaattttttgtacagacagggtctcgttatgccgccccggcttgtgtcaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggattacaggcattagctaccacacttggc----------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778034 283 + 43916225 tcacccaggctggagtgcagtggtgcaatcatggctccctgcagcct-caacct-ctggggtcatgcgatcctcccacctcagactctcaagtagctgggactacaat--tgcgccactacacccagctagttgtttgtttgtttgtttg--tttgtttttcaattttttgtacagacagggtctcgttatgccgccccggcttgtgtcaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggactacaggcattagctaccacacttggttt--------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58215924 283 + 75399963 tcacccaggctggagtgcagtggtgcaatcatggctccctgcagcct-caacct-ctggggtcatgcgatcctcccacctcagactctcaagtagctgggactacaat--tgcgccactacacccagctggttgtttttttgtttttgtt--tttgtttttcaattttttgtaaagacagggtctcgttatgccgccccagcttgtctcaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggattacaggcattagctaccacacTTGCCtt--------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763505 283 - 7209941 tcacccaggctggagtgcagtggtgcaatcatggctccctgcagcct-caacct-ctggggtcatgcgatcctcccacctcagactctcaagtagctgggactacaat--tgcgccactacacccagctagttgtttgtttgtttgtttg--tttgtttttcaattttttgtacagacagggtctcgttatgccgccccggcttgtgtgaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggattacaggcattagctaccacacttggttt--------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 515528 281 + 3907144 tcacccaggctggagtgcagtggtgcaaccatggctccctgcagcct-caacct-ctggggtcatgcgatcctcctacctcagcctctcaagtagctgggactacaat--tgtgccacaacacccaggtag------------ttgtttt--ttttttttccaattttttgtacagacagggtctcgttatgccgcccaggcttgtctcaaactcttagcctcaaatgatcttcctgctctggtctcccaaagtgctggattacaggcattagccaccatacttggcTTTTTTTTTTTT----------- i colAng1.NW_012123265v1 C 0 I 442 s calJac3.chr20 21523219 219 - 44557958 ttacccaggctggagtgcaatggtgcgacctcggctcaccgcaacctccacctc-ctgggttcaggcaattctcctgcctcagcctcctgagtagctgggattacaggcacacgccaccatgcccagctaa----t------------------tttttttgcatatttagtagaaacggggtttcaccatgttgaccaggatggtctcaatctcttgactt--cgtgatccacccgccttggc------------------------------------------------------------------ i calJac3.chr20 I 3609 C 0 s cebCap1.NW_016107433v1 3311444 260 - 5917169 tcacccaggctggagtgcagtggtgcaatcatggctccctgcagcct-caaata-ctgggctcatgtgatcctcccacctcagcctttcaagtagcaaggactacaag--tacgccattacacccagctag----t------------tg--tatttttttcaattttttgtatagacgaggtctcattatgtt-cccaggcttgtc----tctcttaagctaaagtgatcctcccactttgacctcccaaagtgctggataacaggcatgagccaccacactggcc----------------------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272197 267 - 10531588 tcacccaggctggagtgcagtggtacaatcatggctccctgcagcct-caaata-ctgggctcatgtgatcctcccacctcagtctctcaagtagctaggactacaag--tgcgccattacacccagctag----ttgt---------tg--tatttctttcaattttttatatagacggggtctcattatgtt-cccaggcttgtctcgaactcttaggctaatgtgatcctcccactttgacctcccaaagtgctggattacaggcatgagccaccacacttggc----------------------- i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e saiBol1.JH378225 6324361 4386 + 6628207 I e otoGar3.GL873566 13691751 3590 + 13852661 I a score=3205.000000 s hg38.chr16_GL383557v1_alt 38575 27 + 89672 ctcttttcttttctttctttcttt--ttt s panTro5.chr16 21464858 29 - 81586097 ctcttttcttttctttctttctttctttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531495 28 - 90481686 ctcttttcttttctttctttctttc-ttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764530 22 + 3010529 ctcttttcttttctttctt-------ttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875443 19 + 163208435 ---ttctcttttctttctt-------ttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348788 9 - 74971481 -------------tttttt-------ttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058924 9 - 78541002 -------------tttttt-------ttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455181 9 + 26466322 -------------TTTTTT-------TTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778317 13 + 43916225 ---------tttgtttttt-------gtt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216207 9 + 75399963 -------------tttttt-------ttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763788 9 - 7209941 -------------tttttt-------ttt i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21523438 2 - 44557958 ---------------------------tt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3311704 4 - 5917169 ------------------T-------TTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272464 6 - 10531588 ----------------TTT-------TTT i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e colAng1.NW_012123265v1 515809 442 + 3907144 I e saiBol1.JH378225 6324361 4386 + 6628207 I e otoGar3.GL873566 13691751 3590 + 13852661 I a score=89872.000000 s hg38.chr16_GL383557v1_alt 38602 12 + 89672 tttttt------taaagc s panTro5.chr16 21464887 12 - 81586097 tttttt------taaagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531523 12 - 90481686 tttttt------taaagc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764552 12 + 3010529 tttttt------taaagc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875462 12 + 163208435 tttttt------taaagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348797 12 - 74971481 tttttt------taaagc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058933 12 - 78541002 tttttt------taaagc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455190 12 + 26466322 TTTTTT------Taaagc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778330 12 + 43916225 tttttt------aaaagc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216216 12 + 75399963 tttttt------aaaagc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763797 18 - 7209941 tttttttttttaaaaagc i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21523440 12 - 44557958 TTTTTT------TTaagc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3311708 12 - 5917169 TTTTTT------TTaagc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272470 12 - 10531588 TTTTTT------TTaagc i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13695341 12 + 13852661 TTTTTT------Taaagg i otoGar3.GL873566 I 3590 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2931618 1438 + 9850184 I e dasNov3.JH569970 916345 2311 + 1009443 I e colAng1.NW_012123265v1 515809 442 + 3907144 I e saiBol1.JH378225 6324361 4386 + 6628207 I a score=867484.000000 s hg38.chr16_GL383557v1_alt 38614 90 + 89672 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcactcggacc s panTro5.chr16 21464899 90 - 81586097 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcactcggacc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531535 90 - 90481686 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcactcggacc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764564 90 + 3010529 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcactcggacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875474 90 + 163208435 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaaccagttgtgatcaattagttgtaaacaccactgcactcggacc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348809 90 - 74971481 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcacttggacc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21058945 90 - 78541002 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcacttggacc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455202 90 + 26466322 tagtcaagtgaagcagtgagagtggaaaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcacttggacc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778342 90 + 43916225 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcacttggacc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216228 90 + 75399963 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcacttggacc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763815 90 - 7209941 tagtcaagtgaagcagtgagagtggagaaggaacaaat-aatctgtaactagttgtgatcaattagttgtaaacaccactgcacttggacc i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21523452 90 - 44557958 tagtcaagtgcaacagtgaaaatgaagaagaaacaaag-aacctataactagttgcgatcaattagttgtaaataccactgcacttggacc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3311720 90 - 5917169 tagttaagtgaaacagtgaaagtgaagaagaaacaaag-aacctataactagttgtgatcaattagttgtaaataccactgcacctggagc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272482 90 - 10531588 tagtcaagtgaaacagtgaaagtaaagaagaaacaaag-aacttataactagttgtcatcaactagttgtaaataccactgcacttggacc i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2933056 90 + 9850184 tagtcaagtgaagcagtgattgtggagaaggaatgaagaaatctgtaactggtagtgatcaattagttgtaaaccccactgcactc-aatc i proCoq1.NW_012152729v1 I 1438 C 0 s otoGar3.GL873566 13695353 90 + 13852661 tggcgaaatgaagcaatgagagtagagaagcaacaaagaaatctgtaactggttgtgatcaattagttataaacaccactgtattt-aacc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80455993 1483 + 88915250 I e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e colAng1.NW_012123265v1 515809 442 + 3907144 I e saiBol1.JH378225 6324361 4386 + 6628207 I a score=239010.000000 s hg38.chr16_GL383557v1_alt 38704 25 + 89672 agcGCAAACTCATTCTTAACCTAAT s panTro5.chr16 21464989 25 - 81586097 agcGCAAACTCATTCTTAACCTAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531625 25 - 90481686 agcGCAAACTCATTCTTAACCTAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764654 25 + 3010529 agcGCAAACTCATTCTTAACCTAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875564 25 + 163208435 agcGAAAATTCATTCTTAACCTAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348899 25 - 74971481 agcACAAACTAATTCTTAACCTATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059035 25 - 78541002 agcACAAACTAATTCTTAACCTATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455292 25 + 26466322 agcACAAACTAATTCTTAACCTATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778432 25 + 43916225 agcACAAACTAATTCTTAACCTATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216318 25 + 75399963 agcACAAACTAATTCTTAACCTATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763905 25 - 7209941 agcACAAACTAATTCTTAACCTATT i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21523542 25 - 44557958 agcACAAACTCATTCTTAACCTATT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3311810 25 - 5917169 agTACAAACTCATTCTTAACCTATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272572 25 - 10531588 agcACAAACCCATTCTTAACTTATT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2933146 25 + 9850184 agccCAAACCCTTTCTTAACCCCTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13695443 25 + 13852661 agccCAAACTCCTTCCTAACCTGTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80457476 25 + 88915250 AATGCAAATTCATTTTTAATCTGTT i canFam3.chr5 I 1483 C 0 e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e colAng1.NW_012123265v1 515809 442 + 3907144 I e saiBol1.JH378225 6324361 4386 + 6628207 I a score=85595.000000 s hg38.chr16_GL383557v1_alt 38729 6 + 89672 CACCTA s panTro5.chr16 21465014 6 - 81586097 CACCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531650 6 - 90481686 CACCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764679 6 + 3010529 CACCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875589 6 + 163208435 CACCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348924 6 - 74971481 CACCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059060 6 - 78541002 CACCTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455317 6 + 26466322 CACCTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778457 6 + 43916225 CACCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216343 6 + 75399963 CACCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763930 6 - 7209941 CACCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516251 6 + 3907144 cACCTA i colAng1.NW_012123265v1 I 442 C 0 s calJac3.chr20 21523567 6 - 44557958 CACCTA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3311835 6 - 5917169 CACCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272597 6 - 10531588 CACCTA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2933171 6 + 9850184 CACCCA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13695468 6 + 13852661 CACCTA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80457501 6 + 88915250 CACCTA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I e saiBol1.JH378225 6324361 4386 + 6628207 I a score=573070.000000 s hg38.chr16_GL383557v1_alt 38735 55 + 89672 AAATAA------TTCTTATCATCTATTCTTCTTCAGGTAAAAATGGAGCCCTGGATGTTAT s panTro5.chr16 21465020 55 - 81586097 AAATAA------TTCTTATCATCTATTCTTCTTCAGGTAAAAATGGAGCCCTGGATGTTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531656 55 - 90481686 AAATAA------TTCTTATCATCTATTCTTCTTCAGGTAAAAATGGAGCCCTGGATGTTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764685 55 + 3010529 AAATAA------TTCTTATCATCTATTCTTCTTCAGGTAAAAATGGAGCCCCGGATGTTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875595 55 + 163208435 AAATAA------TTTTTATCATGTATTCTTCTTCAGGTAAAAATAGAGCCCTGGATGTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348930 55 - 74971481 AAATAA------TTCTTATCATGTATTCTTCTTCAGGTAAAAATGGAGCCCTGGGTTTTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059066 55 - 78541002 AAATAA------TTCTTATCATGTATTCTTCTTCAGGTAAAAATGGAGCCCTGGGTTTTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455323 55 + 26466322 AAATAA------TTCTTATCATGTATTCTTCTTCAGGTAAAAATGGAGCCCTGGGTTTTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778463 55 + 43916225 AAATAA------TTCTTATCATGTATTCTTCTTCAGGTAAAAATGGAGCCCTGGGTTTTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216349 52 + 75399963 AAATAA---------TTATCATGTATTTTTCTTCAGGTAAAAATGGAGCCCTGGGTTTTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763936 55 - 7209941 AAATAA------TTCTTATCATGTATTCTTCTTCAGGTAAAAATGGAGCCCTGGGTTTTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516257 55 + 3907144 AAATAA------TTCTTATCATGTATTCTTCTTCAGGTAAAAATGGAGCCCTAGGTTTTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21523573 54 - 44557958 AAATAA------TTCTTATTGTGTATTACTTTTCAGGT-AAAATGGAGCCCTGGACTTTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6328747 54 + 6628207 AAATAA------TTCTTATTGTGTATTACTTTTCAGGT-AAAATGGAGCCCTGGATTTTAT i saiBol1.JH378225 I 4386 C 0 s cebCap1.NW_016107433v1 3311841 54 - 5917169 AAATAA------TTCTTATTGTGTATTACTTTTCAGGT-AAAATGGAGCCCTGGATTTTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272603 54 - 10531588 AAATAA------TTCTTATTGTGTATTACTTTTCAGGT-AAAATGGAGCCCTTGATTTTAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2933177 49 + 9850184 AAACAA------TTCTTATCATGTGTTTCTTTTCAAGT-AAAATGGAGTCTTGGAT----- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13695474 44 + 13852661 AAACAA------TTCTAA-----TGTTTCTTTTTGCAT-AAAATGGAACCTTGGAT----- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80457507 54 + 88915250 AAGCAATCCTCATTCTTATCACATATTTCTTTTCAAGC-AAAATGCA-TCTTGGCT----- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54922297 1748 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I a score=621021.000000 s hg38.chr16_GL383557v1_alt 38790 45 + 89672 TTTAACGACTTGCCATCCTTCCTGTTTTGAGAGTGTCTTTGTTAA s panTro5.chr16 21465075 45 - 81586097 TTTAACGACTTGCCATCCTTCCTACTTTGAGAGTGTCTTTGTTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531711 45 - 90481686 TTTAACGACTTGCCATCCTTCCTGCTTTGAGAGTGTCTTTGTTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764740 45 + 3010529 TTTAACGACTTGCCATCCTTCCTGTTTTGAGAGTGTCTTTGTTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875650 45 + 163208435 TTTAACGACTTGCCATCCTGGCTATTTTGAGAGTGTCTTTGTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21348985 45 - 74971481 TTTAACAACTTGCCATCCTGGCTATTTCGAGAGTGTCTTTGTTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059121 45 - 78541002 TTTAACAACTTGCCATCCTGGCTATTTCGAGAGTGTCTTTGTTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455378 45 + 26466322 TTTAACAACTTGCCATCCTGGCTATTTCGAGAGTGTCTTTGTTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778518 45 + 43916225 TTTAACAACTTGCCATCCTGGCTATTTCGAGAGTGTCTTTGTTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216401 45 + 75399963 TTTAACAACTTGCCATCCTGGCTATTTTGAGAGTGTCTTTGTTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6763991 45 - 7209941 TTTAACAACTTGCCATCCTGGCTATTTCGAGAGTGTCTTTGTTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516312 45 + 3907144 TTTAACAACTTGCCATCCTGGCTATTTTGAGAGTGTCTTTGTTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21523627 45 - 44557958 TTTAATGACTTGCCATCCTGGCTATTTTGACAGTGTCTTTGTTAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6328801 45 + 6628207 CTTAATGACTTGCCATTCTGGCTATTTTGACAGTGCCTTTGTTAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3311895 45 - 5917169 TTTAATTACTTGCTATCCTAGCTATTTTGACAGTGTCTTTGTTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272657 43 - 10531588 -TTAATGACTTGCCATCCTGG-TATTTTGACAGTGTCTTTGTTAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924045 45 + 72247402 TTTAACAACTTGCTATCTTGGCTATTCTGAAAGTGTCTTTGTTAA i micMur3.chr20 I 1748 C 0 s proCoq1.NW_012152729v1 2933226 45 + 9850184 TTTAACAACTTGCTATCTTGGCTATTCTGAAAGTGTCTTTGTTAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13695518 45 + 13852661 TTTAACAACTTGCTATCTTGGCTATTCTAAGAGTGTCCTTGTTAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80457561 39 + 88915250 TTTAACAACTTGTTATCC----TATTCTG--AGTGCTTGTGTAAT i canFam3.chr5 C 0 C 0 e mm10.chr8 22459845 1347 - 129401213 I e dasNov3.JH569970 916345 2311 + 1009443 I a score=1800199.000000 s hg38.chr16_GL383557v1_alt 38835 130 + 89672 CTCGTGGCAT-ACC-----TTCGTGACCCG----GTCCTACCTTCCTCATTCAGA-Cct----------------gtgctgttcattgctgtattcccagtcccttaaaaagtactcaacacgtGAATTG---CAAAATGAATTaacaa--ctttgagggag s panTro5.chr16 21465120 130 - 81586097 CTCGTGGCAT-ACC-----TTCGTGACCCG----GTCCTACCTTCCTCATTCAGA-Cct----------------gtgctgttcattgctatattcccagtcccttaaaaagtactcaacaTGTGAATTG---CAAAATGAATTaacaa--ctttgagggag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531756 130 - 90481686 CTCGTGGCAT-ACC-----TTCGTGACCCG----GTCCTACCTTCCTCATTCAGA-Cct----------------gtgctgttcattgctatattcccagtcccttaaaaagtactcaacacgtGAATTG---CAAAATGAATTaacaa--ctttgagggag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764785 130 + 3010529 CTCGTGGCAT-ACC-----TTCGTGACCCG----GTCCTACCTTCCTCATTCAGA-Cct----------------gtgctgttcattgctgtattcccagtcccttaaaaagtactcaacacgtGAACTG---CAAAATGAATTaacaa--ctttgagggag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875695 130 + 163208435 CTCGTGGCAT-ACC-----TTCGTGACCCG----GTCCTACCTTCCTCATTCAGA-Cct----------------gtgctgttcattgctatattcccggtcccttaaaaagtactcaacacgtGAATTG---CAAAATGAATcaacaa--ctttgagggag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349030 130 - 74971481 CTCGTAGCAT-ACC-----TTCATGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------gtgttgttcattgctgtattcccggtctcttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059166 130 - 78541002 CTCGTAGCAT-ACC-----TTCATGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------gtgttgttcattgctgtattcccggtcccttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455423 130 + 26466322 CTCGTAGCAT-ACC-----TTCAAGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------gtgttcttcattgctgtattcccggtcccttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778563 130 + 43916225 CTCGTAGCAT-ACC-----TTCATGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------gtgttgttcattgctgtattcccggtcccttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216446 130 + 75399963 CTCGTAGCAT-ACC-----TTCATGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------gtgttgttcattgctgtattcccggtcccttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764036 130 - 7209941 CTCGTAGCAT-ACC-----TTCATGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------gtgttgttcattgctgtattcccggtcccttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516357 130 + 3907144 CTCGTAGCAT-ACC-----TTCATGATCAG----GTCCTACCTTCCTCATTCAGA-CTt----------------atgttgttcattgctgtattcccggtcccttaaaaagtactcaacacatGAATTG---CAAAATGAATTaacaa--ctttgagggag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21523672 129 - 44557958 CTCGTGTCAT-ACC-----TTTATGACCTG----GTCCTACCTTTCTCATTCAGA-CTT----------------GCGCTGTTCATTGCTGTCTTCCCAGTTCCTGAAAAGGTACCCAACATGTGAATTG---TAAAATGAATTAA-AA--ctttgagggag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6328846 129 + 6628207 CTCGTGGCAT-ACC-----TTCATGACCTG----GTCCTACCTTCCTCATTCAGA-CTT----------------GCGCTGTTCATTGCTGTCTTCTCAGTCCCTGAAAAGGTACCCAACATGTGAATTG---TAAAATGAATTAG-AA--ctttgagggag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3311940 129 - 5917169 CTCGTGGCAT-ATC-----TTCATGACCTG----GTCCTACCTTCCTCATTCAGA-CTT----------------GCGCTGTTCATTGCCGTCTTCCCAGTCCCTGAAAAGGTACCCAACATGTGAATTG---TAAAATAAATTAA-AA--ctctgagggag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272700 129 - 10531588 CTCGTAGCAT-ACC-----TTCATGACCTG----GTCCTACCTTCCTCATTCAGA-CTT----------------GCGCTGTTCATTGCTGTCTTCCCAGTCCCTGAAAAGGTACCCAACATGTGAATTG---TAAAATGAATTAA-AA--ctttgagggag i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924090 131 + 72247402 CTGGTGACAT-ACC-----TTCATGACCCA----GTCCTACCTTCCTCATTCAGA-CTTT----G----------TTGTTGTTCACTGCTGTATTCCTTATCCTTAAAAAAG---CCAACACCTAAATTG---TCAAATGAATTaacaaccctttgagggtg i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2933271 129 + 9850184 CTCATGGCAT-ACC-----TTCACGACCCA----GTCCTACCTTCCTCATTCAGA-Cttt----g----------ttgttgttcactgctgtattccctgtccctaaaaaag---CCAACGC--AAATTG---TCAAATGAATTaacaaccctttgagggag i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13695563 129 + 13852661 CTCACTACAT-CCC-----TTCATGACCCA----GTCCTACCTTCCTCGCTCAGATTTTT----A----------TTGCTGTCCACGGCTATATTCCCTGTCCCTAAAAAAA---CCAACACATAAATTG---TCAAATGA---AATAACCCTTTAAAGGAG i otoGar3.GL873566 C 0 I 1587 s canFam3.chr5 80457600 147 + 88915250 CTCGCAGCATAACC-----TTCATGACCCACCCTGTCTTACCTTCCTCATTCAGA-CCTT----GGTTTTTGTTACTGTCCTTTACTGTAGTATTCCCAGTCCCTAAGATAGCACCCAGGTCACAAACCG---TCAAATGAGTaacaac--ctttgagggag i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 918656 144 + 1009443 CTCCTGGCTC-ATCTTTGTTTCATGACCTA----GTGCTACCTTACTCATTCAGA-CTTCTAAAA----------Attttgttcactgctgtattcctagt-cctcaaaaagtatcaggtatgtaAATTGTTATCAAATGAATTAA-aaccctttgggggag i dasNov3.JH569970 I 2311 C 0 e mm10.chr8 22459845 1347 - 129401213 I a score=1536428.000000 s hg38.chr16_GL383557v1_alt 38965 101 + 89672 gtgttattatcatcctggctttacagatgaggaaactaaggtttacttagcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac s panTro5.chr16 21465250 97 - 81586097 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531886 97 - 90481686 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 764915 97 + 3010529 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875825 97 + 163208435 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349160 97 - 74971481 gtgttattatcatcctggctttatagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059296 97 - 78541002 gtgttattatcatcctggctttatagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455553 97 + 26466322 gtgttattatcatcctggctttatagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778693 97 + 43916225 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216576 97 + 75399963 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764166 97 - 7209941 gtgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516487 97 + 3907144 atgttattatcatcctggctttacagatgaggaaactaaggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21523801 97 - 44557958 gtgttattaccatcctggctttacagatgaggaaactagggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6328975 97 + 6628207 gtgttattaccatcccggctttacagatgaggaaactagagttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagtcagaaacaaac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3312069 97 - 5917169 gtgttattaccatcctggctttacagatgaggaaactagggttta----gcaagattaagtaatttgcctaggggttac--aaaccac-tagccagaaacaaac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9272829 97 - 10531588 gtgttattaccatcctggctttacagatgaggaaactagggttta----gcaagattaagtaacttgcctaggggttac--aaaccac-tagccagaaacaaac i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924221 97 + 72247402 gtgtaattatcaccccagttttacatatgaggaaactaaaggtta----gcaagattaaataacttgcttaagggttac--aaaccac-tagccagaaacaaac i micMur3.chr20 C 0 I 245 s proCoq1.NW_012152729v1 2933400 97 + 9850184 gtgttattatcatcccggtttcacagatgaggaaactaaagttta----gcaagattaagtaacttgcttaggggttac--aaatcgc-tagccagaaacaaac i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80457747 97 + 88915250 atatcattaccatcctggtttttcagatgaggaaactaaagctta----gccaggttgagtaacttgcctaggggttac--aaaccac-tagccagaaacagac i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 918800 99 + 1009443 gtattattacta-cttcattttacagatgaggaaaccaaggctga----gcaaggttgcgtaatttgcccaggcataacataaatggcgcagccagaaacaaac i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22459845 1347 - 129401213 I e otoGar3.GL873566 13695692 1587 + 13852661 I a score=493906.000000 s hg38.chr16_GL383557v1_alt 39066 38 + 89672 ccacatctg----accacaaagtccttgcttctactctaccc s panTro5.chr16 21465347 38 - 81586097 ccacatctg----accacaaagtccttgcttctactctaccc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21531983 38 - 90481686 ccacatctg----accacaaagtccttgcttctactctaccc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765012 38 + 3010529 ccacatctg----accacaaagtccttgcttctactctaccc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875922 38 + 163208435 ccacatctg----accacaaagtccttgcttctaccctaccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349257 38 - 74971481 ccacatctg----accacaaaatccttgcttctactctaccc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059393 38 - 78541002 ccacatctg----accacaaaatccttgcttctactctaccc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455650 38 + 26466322 ccacatctg----accacaaaatccttgcttctactctaccc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778790 38 + 43916225 ccacatctg----accacaaaatccttgcttctactctaccc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216673 38 + 75399963 ccacatctg----accacaaaatccttgcttctaCTCTACCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764263 38 - 7209941 ccacatctg----accacaaaatccttgcttctactctaccc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516584 38 + 3907144 ccacatctg----accacaaagtccttgcttctactctaccc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21523898 38 - 44557958 ccacatctg----accacaaagtccttgcttctaCTCTACCC i calJac3.chr20 C 0 I 336 s saiBol1.JH378225 6329072 38 + 6628207 ccacatctg----accacaaagtccttgcttctaCTCTACCC i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3312166 38 - 5917169 ccacatctg----accacaaagtccttgcttctaCTCTACCC i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9272926 38 - 10531588 ccacatctg----accacaaagtccttgcttctactctacgc i aotNan1.NW_018500622v1 C 0 I 1 s proCoq1.NW_012152729v1 2933497 28 + 9850184 ccatgtctg--------------tcttgcttgtcccctactc i proCoq1.NW_012152729v1 C 0 I 1 s canFam3.chr5 80457844 41 + 88915250 ccacgtctgtctgaccacaaagtcctcatttgtact-taccc i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 918899 42 + 1009443 ctaggtctgtctaaccgcaaagtccttactcATATTCTTCCC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e otoGar3.GL873566 13695692 1587 + 13852661 I a score=44714.000000 s hg38.chr16_GL383557v1_alt 39104 5 + 89672 -ta--------ctg s panTro5.chr16 21465385 5 - 81586097 -ta--------ctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532021 5 - 90481686 -ta--------ctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765050 5 + 3010529 -ta--------ctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875960 13 + 163208435 -taccctgcttctA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349295 5 - 74971481 -ta--------ctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059431 5 - 78541002 -ta--------ctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455688 5 + 26466322 -ta--------ctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778828 5 + 43916225 -ta--------ctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216711 5 + 75399963 -TA--------TTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764301 5 - 7209941 -ta--------ctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516622 5 + 3907144 -ta--------ctg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524272 5 - 44557958 -TC--------CCA i calJac3.chr20 I 336 C 0 s saiBol1.JH378225 6329111 5 + 6628207 -TA--------CCG i saiBol1.JH378225 I 1 I 319 s cebCap1.NW_016107433v1 3312205 5 - 5917169 -TA--------CTG i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9272965 5 - 10531588 -ta--------ctg i aotNan1.NW_018500622v1 I 1 C 0 s proCoq1.NW_012152729v1 2933526 5 + 9850184 -aa--------ctg i proCoq1.NW_012152729v1 I 1 I 1 s canFam3.chr5 80457886 5 + 88915250 -ca--------ctg i canFam3.chr5 I 1 I 1 s dasNov3.JH569970 918941 6 + 1009443 TTA--------CCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e otoGar3.GL873566 13695692 1587 + 13852661 I a score=1450.000000 s hg38.chr16_GL383557v1_alt 39109 3 + 89672 -GCT s panTro5.chr16 21465390 3 - 81586097 -GCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532026 3 - 90481686 -GCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765055 3 + 3010529 -GCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875973 3 + 163208435 -AAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349300 3 - 74971481 -GCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059436 3 - 78541002 -GCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455693 3 + 26466322 -GCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778833 3 + 43916225 -GCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216716 3 + 75399963 -GCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764306 3 - 7209941 -GCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516627 3 + 3907144 -GCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524277 3 - 44557958 -GTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329435 3 + 6628207 -GCC i saiBol1.JH378225 I 319 C 0 s cebCap1.NW_016107433v1 3312210 3 - 5917169 -ACC i cebCap1.NW_016107433v1 C 0 I 317 s aotNan1.NW_018500622v1 9272970 3 - 10531588 -ACC i aotNan1.NW_018500622v1 C 0 I 318 s proCoq1.NW_012152729v1 2933532 2 + 9850184 -ac- i proCoq1.NW_012152729v1 I 1 C 0 s canFam3.chr5 80457892 2 + 88915250 -GC- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 918947 3 + 1009443 GGC- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e otoGar3.GL873566 13695692 1587 + 13852661 I a score=30303.000000 s hg38.chr16_GL383557v1_alt 39112 2 + 89672 AG s panTro5.chr16 21465393 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532029 2 - 90481686 AG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765058 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875976 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349303 2 - 74971481 AG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059439 2 - 78541002 AG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455696 2 + 26466322 AG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20778836 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216719 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764309 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516630 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524280 2 - 44557958 AG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329438 2 + 6628207 AG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3312530 2 - 5917169 AG i cebCap1.NW_016107433v1 I 317 C 0 s aotNan1.NW_018500622v1 9273291 2 - 10531588 AG i aotNan1.NW_018500622v1 I 318 C 0 s proCoq1.NW_012152729v1 2933534 2 + 9850184 ag i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80457894 2 + 88915250 AA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 918950 2 + 1009443 AG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e otoGar3.GL873566 13695692 1587 + 13852661 I a score=1893484.000000 s hg38.chr16_GL383557v1_alt 39114 152 + 89672 AATAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAG--CTCTCTTCTA----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-Acctctgtctcctttgggttgtg s panTro5.chr16 21465395 152 - 81586097 AATAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAG--CTCTCTTCTA----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-ACCTCTCTCTCCTTTGGGTTGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532031 152 - 90481686 AATAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAG--CTCTCTTCTA----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-ACCTCTCTCTCCTTTGGGTTGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765060 152 + 3010529 AATAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAG--CTCTCTTCTA----ACGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-Acctctgtctcctttgggttgtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53875978 154 + 163208435 AATAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGCGGCAGCTCTCTCTTCTA----AAGGAGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-Gcctctgtctcctttgggttgtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349305 151 - 74971481 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-Acctctatc---tttgggttgtg i rheMac8.chr20 C 0 I 7 s macFas5.chr20 21059441 151 - 78541002 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-Acctctatc---tttgggttgtg i macFas5.chr20 C 0 I 7 s macNem1.NW_012011355v1 14455698 151 + 26466322 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-Acctctatc---tttgggttgtg i macNem1.NW_012011355v1 C 0 I 7 s cerAty1.NW_011999143v1 20778838 149 + 43916225 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGGAAGCTCAATTTAAGCTTC---------ATTAA------CCTGGGCATCCTCAACCTCTGATTCCCATGATG----------------GACCTA----TATAG-ACCTCTATC-----TGGGTTgtg i cerAty1.NW_011999143v1 C 0 I 7 s chlSab2.chr5 58216721 151 + 75399963 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAAGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCATCATG----------------GACCTA----TATAG-Acctctatc---tttgggttgtg i chlSab2.chr5 C 0 I 7 s manLeu1.NW_012101698v1 6764311 149 - 7209941 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGGAAGCTCAGTTTAAGCTTC---------ATTAA------CCTGGGCATCCTCAACctctgattcccatgatg----------------gaccta----tatag-acctctatc-----tgggttgtg i manLeu1.NW_012101698v1 C 0 I 7 s colAng1.NW_012123265v1 516632 151 + 3907144 AGTAACTTTTTAATGTCTTGCACTTCTGTGTCTTTACTGGCGGCAGCTCTCTCTTCTT----AAGGGGAAGCTCAATTTAAGCTTC---------ATCAA------CCTGGGCATCCTCAACCTCTGATTCCCACAATG----------------GACCTA----TATAG-Acctctatc---tttgggttgtg i colAng1.NW_012123265v1 C 0 I 7 s calJac3.chr20 21524282 155 - 44557958 AATAACTTTTTAATGTTTTGCACTTCTGTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGAAAGCTCAATTTAAGCTTC---------ATCAA------CCTGAGCATCTTCAACCTCTGATTCCCATGATG----------------GACTTA----AATAGAAACTCTATCTCCTTTGGGTTGTG i calJac3.chr20 C 0 I 7 s saiBol1.JH378225 6329440 143 + 6628207 AATAACTTTTTAATGTTTTGCACTTCTGCGTCTTTACTGGTGGCAGCTCTCTCTTCTTGAGAGAGGGAAAGCTCAATTTAAGCTTC---------ATCAA------CCTGAGCATCTTCAACCTCTGATTCCCATGATG----------------GACTTA----TA----------------TTTGGGTTGTG i saiBol1.JH378225 C 0 I 7 s cebCap1.NW_016107433v1 3312532 153 - 5917169 AGTAACTTTTTAATGTTTTGCACTTCTGTATCTTTACAGGTGGCAGCTATCTCTCCTT----AAGGGAAAGCTCAATTTAAGCTTC---------ATCAA------CCTGAGCATCTTCAACCTCTGATTCCCATGATG----------------GACTTA----TATAGAAA--CTATCTCCTTTGGGTTGTG i cebCap1.NW_016107433v1 C 0 I 7 s aotNan1.NW_018500622v1 9273293 155 - 10531588 AATAACTTTTTAATGTTTTGCACTTATTTGTCTTTACTGGTGGCAGCTCTCTCTTCTT----AAGGGAAAGCTCAATTTAAGCTTC---------ATCAA------CCTGAGCATCTTCAACCTTTGATTCCCATGATG----------------GACTTA----TAGAGAAACTCTATCTCCTTTGGGTTGTG i aotNan1.NW_018500622v1 C 0 I 7 s proCoq1.NW_012152729v1 2933536 166 + 9850184 attaacttcttGATGTCTCACACTTCTGTGTCTTTCCTGGTGGCAGCTTTCTCTT-------AAGAGAAGGTTCAAttcaagcttcgacttctctatcaaactcttcccaggtatcctcaacctctaattcccattatg----------------gaccta----tatag-acctctctctctgttgtgctctc i proCoq1.NW_012152729v1 C 0 I 19 s otoGar3.GL873566 13697279 167 + 13852661 AATAACTTCTTAACATCTCACACTTCTGTGCCCTTACTGGTGGC--CTTACTCTT-------CAG-GAAGGCTCAATTCAAGCTTCAAGCTCTCCATCAAACTTTTCCCAGGCATCCTCAACCTCTAATTCCCATTAGG----------------GACCTACCTGTATGG-ACCTCTCTcccttctgtgtgttg i otoGar3.GL873566 I 1587 I 9 s canFam3.chr5 80457896 170 + 88915250 AATAACTTCCTACTGTCTCTCATTTGTGTGTATTTACTGGTGGCAGCTGTGTCTT-------AGGGGAAGCTTCAACTT---CTCC---------TTCAACCTTTTCCCAGGCATCCTCAACCTCTGACCCCACCAACGCGGGGCAGGGAACCAAGATCTC----TATAG-ATCTCTccttcctttgtgccgtg i canFam3.chr5 C 0 I 7 s dasNov3.JH569970 918952 165 + 1009443 AATAATTTCTTAATCTCTTGTACTTCTGTGTCTTTACTGGT-ACAACTCTCTCTTCT-----AGGGCACAGctcacttcaagcttcaacttctctgttaacctttaccaggacatcctcaacc--tgattcccactgaa----------------gaccta----cgtag-aactcctcttcctttgtgctctg i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I a score=164084.000000 s hg38.chr16_GL383557v1_alt 39266 16 + 89672 -------caaacttctattaaaa s panTro5.chr16 21465547 16 - 81586097 -------CAAACTTCTATTAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532183 16 - 90481686 -------CAAACTTCTATTAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765212 16 + 3010529 -------caaacttctattaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876132 16 + 163208435 -------caaacttctattaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349463 16 - 74971481 -------caaacttctattaaaa i rheMac8.chr20 I 7 C 0 s macFas5.chr20 21059599 16 - 78541002 -------caaacttctattaaaa i macFas5.chr20 I 7 C 0 s macNem1.NW_012011355v1 14455856 16 + 26466322 -------caaacttctattaaaa i macNem1.NW_012011355v1 I 7 C 0 s cerAty1.NW_011999143v1 20778994 16 + 43916225 -------caaacttctattaaaa i cerAty1.NW_011999143v1 I 7 C 0 s chlSab2.chr5 58216879 16 + 75399963 -------caaacttctattaaaa i chlSab2.chr5 I 7 C 0 s manLeu1.NW_012101698v1 6764467 16 - 7209941 -------caaacttctattaaaa i manLeu1.NW_012101698v1 I 7 C 0 s colAng1.NW_012123265v1 516790 16 + 3907144 -------caaacttctattaaac i colAng1.NW_012123265v1 I 7 C 0 s calJac3.chr20 21524444 15 - 44557958 -------CAAA-TTCTATTAAAA i calJac3.chr20 I 7 C 0 s saiBol1.JH378225 6329590 15 + 6628207 -------CAAA-TTCTATTAAAA i saiBol1.JH378225 I 7 C 0 s cebCap1.NW_016107433v1 3312692 15 - 5917169 -------CAAA-TTCTATTAAAA i cebCap1.NW_016107433v1 I 7 C 0 s aotNan1.NW_018500622v1 9273455 15 - 10531588 -------CAAA-TTCTATTAAAA i aotNan1.NW_018500622v1 I 7 C 0 s otoGar3.GL873566 13697455 16 + 13852661 -------cagacttctactgtag i otoGar3.GL873566 I 9 C 0 s canFam3.chr5 80458073 16 + 88915250 -------cagagttctattataa i canFam3.chr5 I 7 C 0 s dasNov3.JH569970 919117 20 + 1009443 ccctctccagacctttagag--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I e proCoq1.NW_012152729v1 2933702 19 + 9850184 I a score=526631.000000 s hg38.chr16_GL383557v1_alt 39282 49 + 89672 cagcacttttagccct--------ctgctgtacttatttact----tctccgt---ttccccac s panTro5.chr16 21465563 49 - 81586097 CAGCACTTCTAGCCCT--------CTGCTGTACTtatttact----tctccgt---ttccccac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532199 49 - 90481686 CAGCACTTCTAGCCCT--------CTGCTGTACTtatttact----tctccgt---ttccccac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765228 49 + 3010529 cagcacttttagccct--------ctgctgtacttatttact----tctccgt---ttccccac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876148 51 + 163208435 cagcacttttagtcct--------ctgctgtacttatttact----tctcctcc-gttccccac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349479 52 - 74971481 tagcacttttagccct--------ctgctgtacttatttact----tctcctccttttccccac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059615 52 - 78541002 tagcacttttagccct--------ctgctgtacttatttact----tctcctccttttccccac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455872 52 + 26466322 tagcacttttagccct--------ctgctgtacttatttact----tctcctccttttccccac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779010 52 + 43916225 tagcacttttagccct--------ctgctgtacttatttact----tctcctccttttccccac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216895 52 + 75399963 tagcacttttagccct--------ctgctgtacttatttact----tctcctccttttccccac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764483 52 - 7209941 tagcacttttagccct--------ctgctgtacttatttact----tctcctccttttccccac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516806 51 + 3907144 tagtac-tttagccct--------ctgctgtacttatctact----tctcctccttttccccac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524459 51 - 44557958 CAGCACTTTTAGCCCt--------ttgctatacttacttact----tctcctcc-ttttccccc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329605 50 + 6628207 GAGCACTTTTAGCCCT--------TTGCTACACTTACTTACT----TCTCCTCC--tttacccc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3312707 47 - 5917169 GAACACTTTTAGCCCT--------TTGCT-CACTTACttact----tctcct----tttccccc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273470 52 - 10531588 CAGCACTTTTAGCCCt--------ttgctacacttacttact----tctcctccttttcccccc i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2933721 60 + 9850184 cagcacttttagtccttcgctgtattgctgtacttatttact----tatgtctttctctctctc i proCoq1.NW_012152729v1 I 19 C 0 s otoGar3.GL873566 13697471 54 + 13852661 gagcacttttagccctttgctttactactgtacttatttact----------ttttttcccctc i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80458089 45 + 88915250 aatcacttttagccct--------ttgttatagttattt-ct----catctctctctt------ i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919137 48 + 1009443 tagcacttataatcct--------ttactatattaatttactcagttctctttctt-------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54924318 245 + 72247402 I e mm10.chr8 22459845 1347 - 129401213 I a score=1244422.000000 s hg38.chr16_GL383557v1_alt 39331 80 + 89672 atctcaactctaaacttcctgaggacaggaatcaggtatcttcaagtgcctctggcatgagttaagagttaag-taaatat s panTro5.chr16 21465612 80 - 81586097 atctcaactctaaacttcctgaggacaggaatcaggtatcttcaagtgcctctggcatgagttaagagttaag-taaatat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532248 80 - 90481686 atctcaactctaaacttcctgaggacaggaatcaggtatcttcaagtgcctctggcatgagttaagagttaag-taaatat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765277 80 + 3010529 atctcaactctaaacttcatgaggacaggaatcaggtatcttcaagtgcctctggcacgagttaagagttaag-taaatat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876199 80 + 163208435 atctcaactctaaacttcctgaggacaggaatcaggtatcttcaagtgcctctggcatgagttaagagttaag-taaatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349531 80 - 74971481 atctcaactctaaacttcccgagggcaggaatcaggtatcttcaagtgtctctggcatgagttaagtgttaag-taaatat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059667 80 - 78541002 atctcaactctaaacttcctgagggcaggaatcaggtatcttcacgtgtctctggcatgagttaagtgttaag-taaatat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14455924 80 + 26466322 atctcaactctaaacttcctgagggcaggaatcaggtatcttcaagtgtctctggcatgagttaagtgttaag-taaatat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779062 80 + 43916225 atctcaactctacacttcctgagggcaggaatcaggtatcttcaagtgtctctggcatgagttaagtgttaag-taaatat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58216947 80 + 75399963 atttcaactctaaacttcctgagggcaggaatcaggtatcttcaagtgcctctggcatgagttaagtgttaag-taaatat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764535 80 - 7209941 atctcaactctacacttcctgagggcaggaatcaggtatcttcaagtgtctctgacatgagttaagtgttaag-taaatat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516857 80 + 3907144 atctcaactctaaacttcctgagggcaggaatcaggtatcttcaagtgcctcaggcatgagttaagtgttaag-taaatat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524510 80 - 44557958 atctcaactctaaacttcctgagggcaggaatcaggtatcttcaagtgcctctggcacaaggtaagagttaag-taaatat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329655 80 + 6628207 atctcagctctaaacttcctgagggcaggagtcaggtatcttcaagtgtctctggcacaaggtaagagttaag-taaatat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3312754 80 - 5917169 atctcaactctaaacttcctgagggcaggaatcaggtgtcttcaagtgcctctggcacaaggtaagagttaag-taaatat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273522 76 - 10531588 atctcaactctaaacttcctgagggcaggaatccggtatcttcaagtgcctctggcacaaggt----gttaag-taaatat i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924563 81 + 72247402 atctcaactctaaacttcctgagggcaggaatcaggtatcttccagtgcctctggcacatgataagagctgaattaaatgt i micMur3.chr20 I 245 C 0 s proCoq1.NW_012152729v1 2933781 80 + 9850184 atctcaactctaaatttcctgagggcaggaatcgagtatcttcgagtgcctctggcatatggtaagagctgaa-taaatgt i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13697525 80 + 13852661 atctcaactctaaacttcttgagggcaggaatcaggtatctttgagtgcctctggcatatgataagagccgaa-taaatgt i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80458134 79 + 88915250 atctcaactccaaacttcctgaaggcaggaaccaggtatcttcaagtgcctctagcacatggt-agagttgag-taaacat i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919185 66 + 1009443 atttcaattctaagattcttggaggag--------------tcaagtgtctctggcatatgaaggattttgaa-taaatga i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22459845 1347 - 129401213 I a score=3410806.000000 s hg38.chr16_GL383557v1_alt 39411 216 + 89672 ctgatg----aatgaa----taaatAACTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAACTCAATTCCTTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGATTGGC--------------AAAAGTGTGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCACTGTGAGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTCAGACATCTAA-TGGAAGGACAACAT s panTro5.chr16 21465692 216 - 81586097 ctgatg----aatgaa----taaatAACTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAACTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGATTGGC--------------AAAAGTGTGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCACTGTGAGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTCAGACATCTAA-TGGAAGGACAACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532328 216 - 90481686 ctgatg----aatgaa----taaatAACTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAACTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGATTGGC--------------AAAAGTGTGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCACTGTGAGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTCAGACATCTAA-TGGAAGGACAACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765357 216 + 3010529 ctgatg----aatgaa----taaatAACTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAACTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGATTGGC--------------AAAAGTGTGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCACTGTGAGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTCAGACATCTAA-TGGAAGGACAACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876279 232 + 163208435 ctgatg----aatgaa----taaatAACTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAACTCAATTCCCTAACCACAGGCAACCAAAGACTATATAGCTTGCCCTGGTGTGGGATTGGCAAAAGCGTGCCTGAAAAAGCGTGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCACTGTGCAATGATATGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349611 214 - 74971481 ctgatg----aacgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCATTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGA--GTGCCTGAAATTCCCTGCCCACACCACAGAAAAGCATCACTGTGCGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059747 214 - 78541002 ctgatg----aacgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCATTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGA--GTGCCTGAAATTCCCTGCCCACACCACAGAAAAGCATCACTGTGCGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456004 297 + 26466322 ctgatg----aacgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCATTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGA--GTGCCTGAAATTCCCTGCCCACATCACAGAAAAGCATCACTGTGCGATGATACGGCAGTTTTTCAAGTTTTGAGATATCTAATGGAAGGACAATATGGTACAGCTTGAAAACTTTAAAGACTAAACTTAATGATACGGCAGTTTCTCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779142 214 + 43916225 ctgaag----aacgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCATTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGA--GTGCCTGAAATTCCCTGCCCACACCACAGAAAAGCATCCCTGTGCGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217027 214 + 75399963 ctgatg----aacgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCATTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGA--GTGCCTGAAATTCCCTGCCCACACCACAGAAAAGCATCACTGTGCGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764615 214 - 7209941 ctgatg----aacgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCATTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGA--GTGCCTGAAATTCCCTGCCCATACCACAGAAAAGCATCCCTGTGCGATGCTACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 516937 216 + 3907144 ctgatg----aatgaa----taaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTCACTCAATTCCCTAACCACAGGCAACTAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGAGCGCGCCTGAAATTCCCTGCCCACACCACAGAAAAGCATCACTGTGCGATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524590 216 - 44557958 ctgatg----aatgag----tgaatTACTCCTGCAAATCCCCGAGATTAAAA-GGAAA------CTTTTAGCTCGATTCCCTAACCACAGGCAATCAAAGAC--TGTAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGAGCATGCCTCAAATTCCCTGCCCACACCACAAAAAAGCATTGTTGTGCAATGATATGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329735 217 + 6628207 ctgatg----aatgag----tgaatAATTCCTGCAAATCTCTGAGATAAAAACGGAAA------CTTTTAGCTCAATTCCCTAACCGCAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AACAGCATGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCGTTGTGCAATGATACGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3312834 216 - 5917169 ctgatg----aatgag----ggaatAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAGCTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGAGCATGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCGTTGTGCAATGATATGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTTAGACATCTAA-TGGAAGGACAACCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273598 220 - 10531588 ttgatg----aatgagtgaatGAATAATTCCTGCAAATCCCTGAGATAAAAA-GGAAA------CTTTTAGCTCAATTCCCTAACCACAGGCAACCAAAGAC--TATAGCTTTCCCTGGTGTGGGGTTGGC--------------AAGAACATGCCTGAAATTCCCTGCCCACACCACAAAAAAGCATCGTTGTGCAATGATATGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924644 203 + 72247402 ttgatg----aatgaa----tgaaGAATCCCTACAAATCTCTCAGATGAAAA-GGAAC------CCTTTAGCTCAATTCCCTAACCACAGGCAACCAGAAAC--TACAGCTTTCCCTAGCATGGGGGTGGC--------------AAGAGCATGCCTAAAATTCCCTGCCC-------------GCATCACTGTGCCATGTTAAGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAGTAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2933861 220 + 9850184 ttgatgaataaatgaa----tGAATGATCCCTACAAATCCCTGAGATGAAAA-GGAAC------CCTTTAGCCCAGTTCCCCAACCACAGGCAACCAGAGAC--TACAGCTTTCCCCAGCATGGGGGTGGC--------------AAGAGCATGCCTAAAATTCCCTGCCCACACCACAAAAGAGCATCACTGTGCCATGTTAAGGCAGTTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGGACAATAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13697605 216 + 13852661 ttgatg----gatgaa----tgaatGATCCCTACAAGTCCCTGAGACAAAAA-GGAAC------CCTTTAGCTCAGTCCCCTAAACATAGGCAACCAGAGAC--TATAGCTTTCCCTGGCATGGGGGTGGT--------------AAGAGCATGCCTGAAATTCCCTGCCCACACAACAAAAGAGCATCACTGTGTTGTGTTAAGGCAATTTT-----------------------------------------------------------------------------------TCAAGTTTTGAGACATCTAA-TGGAAGAACAATGT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22461192 213 - 129401213 CTGTAG----GCTGTA----GGAACAATGCCTTCACCAATCCAAGGTAAAAA-AGAGAAAGAGTCCTTTAGCTCCATTCCCTAACCTCAAGAAACCAGACAC--TAAGGCTGCTCCTGACATGTGGGTGGC--------------AAGAACATGCCTGAAATTCCCTGCCCACACCACCAAAAG--ATTATTATGTTATGTCAAGGCAAGGTT-----------------------------------------------------------------------------------TCAGG------GAC-TCTAA-CGGAGGGACAATAT i mm10.chr8 I 1347 I 511 s canFam3.chr5 80458213 206 + 88915250 ttgctg----tatgaa----cgaatAATCCCAACAAATTCATGAGATAAAAA-GAAAC------CCTTTAGCTCAGTTCCCTAACCACAAGCAACCAGAGAC--TACTGCTTTCTTTTGCTTGGGGGTGGC--------------CAGGGCATGCCTGAAATTCCCTGCCCACATCACAAAAGAGCATCACTGTGC--TACTAGGGCAGCTTT-----------------------------------------------------------------------------------TCAAGTTCTGAGACATCTAA-TGGAGG-------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919251 205 + 1009443 ttgatg----aattaattaatGAACAATCTCTATAAATCACAG-GACAAAAT-GGGAA------CCTTTTGCTCAGTTCCCTAAGCACAGGCAACCAGAGAC--AG-----------GGCATGGGGGTGG---------------AAGGACATGCTCGAAATTCCCTGCCCACATCACAAAAGAACATCACTGTGCTACGTGAAAGCAGTTTT-----------------------------------------------------------------------------------TCCAAGTTTGGGACATCTAATTGGAAGGACAA--- i dasNov3.JH569970 C 0 C 0 a score=298566.000000 s hg38.chr16_GL383557v1_alt 39627 19 + 89672 GGTACAGCCTGAAAACTTT s panTro5.chr16 21465908 19 - 81586097 GGTACAGCCTGAAAACTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532544 19 - 90481686 GGTACAGCCTGAAAACTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765573 19 + 3010529 GGTACAGCCTGAAAACTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876511 19 + 163208435 GGTACAGCCTGAAAACTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349825 19 - 74971481 GGTACAGCTTGAAAACTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059961 19 - 78541002 GGTACAGCTTGAAAACTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456301 19 + 26466322 GGTACAGCTTGAAAACTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779356 19 + 43916225 GGTACAGCTTGAAAACTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217241 19 + 75399963 GGTACAGCTTGAAAACTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764829 19 - 7209941 GGTACAGCTTGAAAACTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517153 19 + 3907144 GGTACAGCTTGAAAACTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524806 19 - 44557958 AGTACAGTTTGAAAACTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329952 19 + 6628207 AGTACAGCTTGAAAACTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3313050 19 - 5917169 AGTACAGCTTGAAAACTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273818 19 - 10531588 AGTACAGCTTGAAAACTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924847 19 + 72247402 AGTACAGTTTGAAAACTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2934081 19 + 9850184 AGTGCAGTTTGAAAACTTT i proCoq1.NW_012152729v1 C 0 I 329 s otoGar3.GL873566 13697821 19 + 13852661 AGTACAGTTTGAAAATGTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80458419 12 + 88915250 -------TTCCAAAACTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919456 17 + 1009443 --TACAGTTTGAAAATGTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22461405 511 - 129401213 I a score=348828.000000 s hg38.chr16_GL383557v1_alt 39646 27 + 89672 AAAGACTAAACTTAAAATCTGTCTTTT s panTro5.chr16 21465927 27 - 81586097 AAAGACTAAACTTAAAATCTGTCTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532563 27 - 90481686 AAAGACTAAACTTAAAATCTGTCTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765592 27 + 3010529 AAAGACTAAACTTAAAATCTGTCTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876530 27 + 163208435 AAAGACTAAACTTAAAATCTATCTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349844 27 - 74971481 AAAGACTAAACTTAAAATCTATCTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21059980 27 - 78541002 AAAGACTAAACTTAAAATCTATCTTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456320 27 + 26466322 AAAGACTAAACTTAAAATCTATCTTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779375 27 + 43916225 AAAGACTAAACTTAAAATCTATCTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217260 27 + 75399963 AAAGACTAAACTTAAAATCTATCTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764848 27 - 7209941 AAAGACTAAACTTAAAATCTATCTTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517172 27 + 3907144 AAAGACTAAACTTAAAATCTATCTTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524825 27 - 44557958 AAAGACTAAACTTAAAATCTATCGCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329971 27 + 6628207 AAAGACTAAACTTAAAATCTATTGCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3313069 27 - 5917169 AAAGACTAAACTTAAAATCTATTGCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273837 26 - 10531588 AAAGACTAAACTT-ACATATATTGCTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924866 27 + 72247402 AAGGACTAAGCATAAAATCTGTCTTTT i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13697840 23 + 13852661 AAGGACTAAGCATAAA----TTCTTTC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80458431 27 + 88915250 AAGGGCTAAGCATAAAATCTATCTTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919473 27 + 1009443 AAGGGTCAAACATAAAATCTATCCTTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22461405 511 - 129401213 I e proCoq1.NW_012152729v1 2934100 329 + 9850184 I a score=105730.000000 s hg38.chr16_GL383557v1_alt 39673 6 + 89672 AAAAGT s panTro5.chr16 21465954 6 - 81586097 AAAAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532590 6 - 90481686 AAAAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765619 6 + 3010529 AAAAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876557 6 + 163208435 AAAAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349871 6 - 74971481 AAAAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060007 6 - 78541002 AAAAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456347 6 + 26466322 AAAAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779402 6 + 43916225 AAAAGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217287 6 + 75399963 AAAAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764875 6 - 7209941 AAAAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517199 6 + 3907144 AAAAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524852 6 - 44557958 AAAAGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6329998 6 + 6628207 AAAAGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3313096 6 - 5917169 AAAAGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273863 6 - 10531588 AAAAGT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924893 6 + 72247402 AAAAGT i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13697863 6 + 13852661 AAAAGT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22461916 6 - 129401213 aAAAGT i mm10.chr8 I 511 C 0 s canFam3.chr5 80458458 6 + 88915250 AGCAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919500 6 + 1009443 AAAATT i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2934100 329 + 9850184 I a score=2067629.000000 s hg38.chr16_GL383557v1_alt 39679 135 + 89672 GGCCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGCTTG-AAAATGCAATGTCG s panTro5.chr16 21465960 135 - 81586097 GGCCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACTCAGTGGCTTG-AAAATGCAACGTCG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532596 135 - 90481686 GGCCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACTCAGTGGCTTG-AAAATGCAACGTCG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765625 135 + 3010529 GGCCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGTTTG-AAAATGCAACGTCG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876563 135 + 163208435 GGCCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTAGTTCAATTAAATCATCTTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACGCAGTGGCTTG-AAAATGCAACGTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21349877 135 - 74971481 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTAGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGCTTC-AAAATGCAACGTCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060013 135 - 78541002 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTAGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGCTTC-AAAATGCAACGTCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456353 135 + 26466322 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTAGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGCTTC-AAAATGCAACGTCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779408 135 + 43916225 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTCTACACCCAGTGGCTTC-AAAATGCAACGTCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217293 135 + 75399963 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGACTTC-AAAATGCAACGTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6764881 135 - 7209941 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-TTTTACATATTTTGAGTAA-----TTTTAT-TTCTACACCCAGTGGCTTC-AAAATGCAACGTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517205 135 + 3907144 GGTCTACCTGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGG-CTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGCTTC-AAAATGCAACGTCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524858 136 - 44557958 GGCCTACCCGGATAGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAACTAAATCATTGTTTTCAGTGGTTTTTACATATTTTGAGTAA-----TTTTAT-TTTTACACGGAGTGGCTTG-AAAATGCAACGTCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6330004 137 + 6628207 GGCCTACCCGGATGGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTGGTTCAACTAAATCATTGTTTTCAGTGGTTTTTACAGATTTTGATTAA-----TTTTAT-TTTTACACCCAGTGGCTTGAAAAATGCAACGTCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3313102 136 - 5917169 AGTCTACCCGGATGGGACACCAGCTCTCAATTTTG-AATAATGTTTGACTGGTTCAATTAAATCATTGTTTTCAGTGGTTTTTACATATTTTGAGTAA-----TTTTAT-TTTTACAACCAGTGGCTTG-AAAATGCAACGTCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9273869 136 - 10531588 GGCCTACCCGGATAGGACACCAGCTCTCAATTTTA-AATAATGTTTGACTTGTTCAACTAAATCATTGTTTTCAGTGGTTTTTACGTATTTTGAGTAA-----TTTTAT-TTTTACACCCAGTGGCTTG-AAAATGCAACGTCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54924899 133 + 72247402 GGCCTACCTGGATGGAACACCAGCACTCAACTTTA-AATA--GTTTGACTGGTTCAATTAAATCACTGTTTTCAGTGA-CATTGTATATCTTGAGTAA-----TTTTAT-TTTTATATCCCCTGGCTTG-AGAATGCAATGTCT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2934429 125 + 9850184 GGCCTACCTGGATGGAACACCAGCTCTCAACTTTA-----------GTTTGGTTCAATTAAATCACTGTTTTCAGTGA-TTTTGTGTATTTTGAGTAA-----CATTAT-TTTTATATCCCCTGGCTTG-AAAAGGCAATGTCA i proCoq1.NW_012152729v1 I 329 C 0 s otoGar3.GL873566 13697869 124 + 13852661 GAGCTACC----TGGAACACCAATGCTCAACTTTA-AAT-------AACTAGTTCAATCAAATCTCTGTTTTTAGCGA-CTTTGACTATTTTGAGTAA-----TTTTAT-CTTTACATCCTGTAACTTG-AAAATGCAGTGTCA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22461922 119 - 129401213 ATCTTGTCTGGAGGAGAAAACAG--CTCAATTTTA-AAT--CGTCTGTCTGGCTC-ACTAAAGGACTCTTTT-AGGGA-TTTTGTA---TTTGAGCAA-------TTAT-TTTTAC-----TTGGCTTA-AAAATGGAACACCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80458464 131 + 88915250 GGTCTACCTGGATGGAACACCAGCTCTTGATTTTAAAATAACGTTTGACTAGTTCAACTAAGTCACTGT----------TATCACATATTCTAAGTTATTTTATTTTAT-TTTTAT-CTCTTTGGCTTG-AAAGTGTCATTTCg i canFam3.chr5 C 0 I 157 s dasNov3.JH569970 919506 127 + 1009443 GGCCTACCAGAAAGGGACACCAGGTCTCCATTTTA-AAACAT-------TGTTTCAGTTAAATCACTGTTTTCAGCGA-TTTTGCATATTTTGAGTAC-----TTTTATGTTTTATACTC-CTAGCTT--AAAATGAAATGCCA i dasNov3.JH569970 C 0 C 0 a score=2205051.000000 s hg38.chr16_GL383557v1_alt 39814 138 + 89672 TAAATCTACTATATT---------------------GACTTCCTCACTACTTATAAGAACAAAAACTGCTTGTCTTGTACA-AAGTGGGAAAATAAAGTAGAACCTGCATGTTAGGTAAAAAGGCATTCAATAAACATGTTATTATGCGGCCAT-----------CTTTCT s panTro5.chr16 21466095 138 - 81586097 TAAATCTACTATATT---------------------GACTTCCTCACTACTTATAAGAACAAAAACTGCTTGTCTTGTACA-AAGTGGGAAAATAAAGTAGAACCTGCGTGTTAGGTAAAAAGGCATTCGATAAACATGTTATTATGCTGCCAT-----------CTTTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532731 138 - 90481686 TAAATCTACTATATT---------------------GACTTCCTCACTACTTATAAGAACAAAAACTGCTTGTCTTGTACA-AAGTGGGAAAATAAAGTAGAACCTGCGTGTTAGGTAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765760 138 + 3010529 TAAATCTACTATATT---------------------GACTTCCTCACTACTTATAAGAACAAAAACTGCTTGTCTTGTACA-AAGTGGGAAAATAAAGTAGAACCTGCGTGTTAGGTAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876698 138 + 163208435 TAAATCTACTATATT---------------------GACTTCCTCACAACTTGTAAGAACAAAAACTGCTTGTCTTGTACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGTAAAAAGGCATTCAACAAACATGTTATTATGCTGCCAT-----------CTTTCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350012 138 - 74971481 TAAATCTACTATATT---------------------GACTTCCTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGCAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060148 138 - 78541002 TAAATCTACTATACT---------------------GACTTCCTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGCAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456488 138 + 26466322 TAAATCTACTATATT---------------------GACTTCCTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGCAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779543 138 + 43916225 TAAATCTACTATATT---------------------GACTTCCTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGCAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217428 138 + 75399963 TAAATCTACTATATT---------------------GACTTCCTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGCAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765016 138 - 7209941 TAAATCTACTATATT---------------------GACTTCCTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTGTGTGTTAGGCAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517340 138 + 3907144 TAAATCTACTATATT---------------------GACTTCTTCACAACTTATAAGAACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACGTGTGTGTTCGGTAAAAAGGCATTCAATAAACATGTTATTATGCTGCCAT-----------CTTTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21524994 130 - 44557958 TAAATTTACTATATT---------------------GACTTCCTCACAACTTATAAGGACAAAAAC----TGTCTTATACA-AAGTGGGAAAATAAAGTAACACCTG--AGTTAGGTAAAAAGGCATTCAATAA--ATGTTATTATGCTGTCAT-----------CTTCCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6330141 133 + 6628207 TAAATTTACTATATT---------------------GACTTCC---CAACTTATAAGGACAAAAACTGCTTGTCTTATACA-AAGTGGGAAAATAAAGTAGAACCTG--TGTTAGGTAAAACGGCATTCAATAAATATGTTATTATGCTGCCAT-----------Ctttct i saiBol1.JH378225 C 0 I 1388 s cebCap1.NW_016107433v1 3313238 134 - 5917169 TAAATTTACTTTATT---------------------GACTTCCTCACAACTTATCAGGACAAAAACTGCTTGTCTTATACA-AAGTAGGAAAATAAAGTAGAACCTG--TGTTTGGTAAAAAGGCATTCAATAA--ATGTTATTATGCTGCCAT-----------CTTTCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274005 136 - 10531588 TAAATTTACTATATT---------------------GACTTCCTCACAACTTATAAGGACAAAAACTGCTTGTCTTACACA-AAGTGGGAAAATAAAGTAGAACCTG--CGTTAGGTAAAAAGGCATTCAATAAATATGTTATTATGCTGTCAT-----------CTTTCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54925032 148 + 72247402 TAAGTCTACCATATT---------------------GACTTCCCCAC-ATTTATAAGGACAAAAACTGCCTGTCTTATACC-AAATGGGAAAATAAAGTAGAACCTGTGTGTTAGGTAAAAAGGCATTCAATAAATATGTTATTATGCTGCCATCTATAAACCACCTTTCT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2934554 148 + 9850184 TAAGTCTACCATATT---------------------GACTTCACCAC-ATTTATAAGGACAAAAACTCCCTGTCTTGTACC-AAATGGGAAAATAAAATAAAACCTGTCTGTTAGGTAAAAAGGCATTCAATAAATATGTTATTATGTTGCCATCTATAAACCACCTTTCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13697993 141 + 13852661 TAAATCTACCATATT---------------------GACTTCCTCAC-ATTTGGAA-GACAAAAACTGCCTGTCTTATGCC--AATGGGAAAATAAAGTAGAATTTTTGTATTAGGTAAAAAGGCAGTCAATGAA-----TATTATGCTGCTATCTATAAACCTCCTTTCC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462041 139 - 129401213 CAAACGTACTATACT---------------------GACTTTCCCAC-ATCTATACAGACAAAAACTGTTTGTCTTACACA-AAATGGGAAAATAAAGT------CATAGACCAGGTAAAAAGGCTTCCAGTAA--ATGTTACTATGCCACCATTTGTAAACCT-GTTTCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80458752 170 + 88915250 taaataaaatATATTTTTTTAAAAAGTGTAATTTCATATTTCCCCAC-ACATTTAAGGGCAAAAACTGCTTGTCATTTACAAAAATAGGAAAATAAAATAGAACCTGTGTGTTAGGTAAAAAGGCACTCAATAAATATGTTATTATGCTGCTATTTGCAAAGCCTCCTCCT i canFam3.chr5 I 157 C 0 s dasNov3.JH569970 919633 140 + 1009443 TAAACCCACCATATT---------------------GACTTAT-----ATCTATAGAGACAAAAAC----TGTCTTTTACC-AAATGGGAAAATAAAGTAGAACCTGTGTATTAGGTAAAAAAGCATTCAATAAATATGTTATTATGCTCCCATTTGCACATCCTCTTTCT i dasNov3.JH569970 C 0 C 0 a score=744286.000000 s hg38.chr16_GL383557v1_alt 39952 54 + 89672 AAAAGCACACGTGGCCTATTTTAG-CCCAATAAAGACTGGGAAGCATTTACTGCA s panTro5.chr16 21466233 54 - 81586097 AAAAGCACACGTGGCCTATTTTAG-CCCAATAAAGACTGGGAAGCATTTACTACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532869 54 - 90481686 AAAAGCACACGTGGCCTATTTTAG-CCCAATAAAGACTGGGAAGCATTTACTACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765898 54 + 3010529 AAAAGCACACGTGGCCTATTTTAG-CCCAATAAAGACTGGGAAGCATTTACTACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876836 54 + 163208435 AAAAGCGCACGTGGCCTATTTTAG-CCCAATAAAGACTGGGAAGCATTTACTATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350150 54 - 74971481 AAAAGCACACATGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCGTTTGCTACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060286 54 - 78541002 AAAAGCACACATGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCATTTGCTACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456626 54 + 26466322 AAAAGCACACATGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCATTTGCTACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779681 54 + 43916225 AAAAGCACACGTGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCATTTGCTACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217566 54 + 75399963 AAAAGCACACGTGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCATTTGCTACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765154 54 - 7209941 AAAAGCACACGTGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCATTTGCTACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517478 54 + 3907144 AAAAGCACACGTGGCCTATTTTAG-TCCAATAAAGACTGGGAAGCATTTGCTACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525124 53 - 44557958 AAAAGCATAAGTGGCCAA-TTTAG-TCTAACAAATACTGGGAAGCATTTACTACA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313372 53 - 5917169 AAAAGCATACATGGCCTA-TTTAG-TGTAACAAATACTGGGAAGCATTTACTACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274141 53 - 10531588 AAAAGCATACGTGGCCTA-TTTAG-TCTAACAAATACTGAGAAGCATTTACTACA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54925180 54 + 72247402 AAAAGCACATGTGGCCTATTTTAC-ACTAATAAATTCTGGGAAGCATTTACTAGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2934702 54 + 9850184 AAAAGCACATGTGGCCTATTTTAC-ACTAATAAATACTGGGAAGCATTTACTAGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698134 52 + 13852661 AAAAGCACA--AGGTCTATTTTAG-ACTAATAAGTACTGGAAAGTATTTACTAGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462180 54 - 129401213 AAGAGCACCCAAGGCCTATGAGGGAACTAATGAATG-TGGGAAGCATGTACTAGA i mm10.chr8 C 0 C 0 s canFam3.chr5 80458922 54 + 88915250 AAAAGCCCAAGTGGCCTATTTTAG-ACTAATGAATACTGGGAAACATTTACCAGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919773 53 + 1009443 AAAAGTACATGT-GCCTGTTTTAG-GCTAAAGAATACTGCATAGCATTTTCTAGA i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6330274 1388 + 6628207 I a score=791878.000000 s hg38.chr16_GL383557v1_alt 40006 54 + 89672 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACTATACCTATACAAAAA s panTro5.chr16 21466287 54 - 81586097 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACTATACCTATACAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532923 54 - 90481686 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACTATACCTATACAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 765952 54 + 3010529 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACTATACCTATACAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876890 54 + 163208435 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACGATACCTATACAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350204 54 - 74971481 AGGTTTTCATTTTACTAGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060340 54 - 78541002 AGGTTTTCATTTTACTAGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456680 54 + 26466322 AGGTTTTCATTTTACTAGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779735 54 + 43916225 AGGTTTTCATTTTACTAGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217620 54 + 75399963 AGGTTTTCATTTTACTAGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765208 54 - 7209941 AGGTTTTCATTTTACTAGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517532 54 + 3907144 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACTATACCTACACAAAAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525177 54 - 44557958 AGGTTTTCGTTTTGCTGGTCTGAATACTATGTTCAAACTATACCTACACAAAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313425 54 - 5917169 AGGTTTTCATTTTACTGGTCTGAATACTAGGTTCAAACTATACCTACACAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274194 54 - 10531588 AGGTTTTTATTTTGCTGGTCTGAATACTAGGTTCAAACTATACTTACACAAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54925234 54 + 72247402 GGGTTTTCATTTTACTGGTATGAATACCAGGTTCAAACTATATCCACACAAAAA i micMur3.chr20 C 0 I 828 s proCoq1.NW_012152729v1 2934756 54 + 9850184 GGTTTTTCATTTTATTGGTATGAATACCAGGTTCAAAATATATCCACACAAAAA i proCoq1.NW_012152729v1 C 0 I 826 s otoGar3.GL873566 13698186 54 + 13852661 GAGTTTTCATTTTACTGGTATAAATACCAGATTCAAACTATATCAACACAAAAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80458976 51 + 88915250 TGATCTTCATTTAATTGGTATGAATACCAGGTTCAAAATATAGCTAAACAA--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919826 54 + 1009443 TGGTTTTCATTTTACTTGTATGAAAACCAGGTTCAAACTATATCTAAAAAAAGG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22462234 0 - 129401213 C e saiBol1.JH378225 6330274 1388 + 6628207 I a score=38712.000000 s hg38.chr16_GL383557v1_alt 40060 12 + 89672 ----GTAGG-TTGGTTG s panTro5.chr16 21466341 12 - 81586097 ----GTAGG-TTGtttg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532977 12 - 90481686 ----GTAGG-TTGtttg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766006 12 + 3010529 ----GTAGG-TTGtttg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876944 8 + 163208435 ----GTGGG-----TTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350258 8 - 74971481 ----GTGGG-----TTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060394 8 - 78541002 ----GTGGG-----TTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456734 8 + 26466322 ----GTGGG-----ttg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779789 8 + 43916225 ----GTGGG-----ttg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217674 8 + 75399963 ----GTGGG-----TTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765262 8 - 7209941 ----GTGGG-----TTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517586 8 + 3907144 ----GTGGG-----TTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525231 12 - 44557958 ----GTGGG-ttttttg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313479 12 - 5917169 ----GTGGG-ttttctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274248 13 - 10531588 ----GTGGGtttttttg i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13698240 3 + 13852661 --------------CTG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80459027 12 + 88915250 GAAACTGGG-----TTG i canFam3.chr5 C 0 I 5 e micMur3.chr20 54925288 828 + 72247402 I e mm10.chr8 22462234 0 - 129401213 C e proCoq1.NW_012152729v1 2934810 826 + 9850184 I e dasNov3.JH569970 919880 0 + 1009443 C e saiBol1.JH378225 6330274 1388 + 6628207 I a score=637211.000000 s hg38.chr16_GL383557v1_alt 40072 82 + 89672 tttgtttttgagatggagtcttgctctgtcatccaggctgggcatccatgctggagtgcagtggtgagatcttggctcactg s panTro5.chr16 21466353 82 - 81586097 tttgtttttgagatggagtcttgctctgtcatctaggctgggcatccatgctggagtgcagtggtgagatcttggctcactg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21532989 82 - 90481686 tttgtttttgagatggagtcttgctctgtcatctaggctgggcatccatgctggagtgcagtggtgagatcttggctcactg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766018 82 + 3010529 tttgtttttgagatggagtcttgctctgtcatccaggctgggcatccatgctggagtgcagtggtgagatcttggctcactg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53876952 82 + 163208435 tttgtttttgagacaaagtcttgctctgtcatccaggctgggcatccaggctggagtgcagtggtgagatcttggctcactg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350266 82 - 74971481 tttgtttttgagacggagtcttgctctgtcatccaggctaggcatccaggctggagtgcagtggtgccatcttggctcactg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060402 82 - 78541002 tttgtttttgagacggagtcttgctctgtcatccaggctaggcatccaggctggagtgcagtggtgccatcttggctcactg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456742 82 + 26466322 tttgtttttgagacggagtcttgctctgtcatccaggctaggcatccaggctggagtgcagtggtgccatcttggctcactg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779797 76 + 43916225 tttgtttttgagacggagtcttgctctgtcatccaggctaggcatccaggctggagtgcagtggtgccatcttg------tg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217682 82 + 75399963 tttgtttttgagacggagtcttgctctgttatccaggctaggcatccaggctggagtgcagtggtgcgatcttggctcactg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765270 76 - 7209941 tttgtttttgagacggagtcttgctctgtcatccaggctaggcatccaggctggagtgcagtggtgccatcttg------tg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517594 82 + 3907144 tttgtttttgagacggagtcttgctctgtcatccaggctgggcatccaggctggagtgcagtggtgcgatcttggctcactg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525243 69 - 44557958 tttgtttttgagatgtagtcttgctctgtcacccag-------------gctggagtgcagtggtgctatctcagctcactg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313491 69 - 5917169 tttgtttctgagatgtagtcttgctctgtcacccag-------------gctggagtacagtggtgctatctcagatcactg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274261 69 - 10531588 tttgtttttgagatgtagtcttgctctgtcacccag-------------gctggagtgcagtggtgctatctcagctcactg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80459039 5 + 88915250 I e micMur3.chr20 54925288 828 + 72247402 I e mm10.chr8 22462234 0 - 129401213 C e proCoq1.NW_012152729v1 2934810 826 + 9850184 I e dasNov3.JH569970 919880 0 + 1009443 C e saiBol1.JH378225 6330274 1388 + 6628207 I e otoGar3.GL873566 13698243 0 + 13852661 C a score=963309.000000 s hg38.chr16_GL383557v1_alt 40154 117 + 89672 cagcctccacctctgaggttcaaacgattcccctgcctcagcctccctaggagctgggattacaggcatctgccaccacgcctggctaattttcgtatttttagtagagacgaggtt s panTro5.chr16 21466435 117 - 81586097 cagcctccacctctgaggttcaaacgattctcctgcctcagcctccctaggagctgggattacaggcatctgccaccacgcctggctaattttcgtatttttagtagagacgaggtt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533071 117 - 90481686 cagcctccacctctgaggttcaaacgattctcctgcctcagcctccctaggagctgggattacaggcatctgccaccacgcctggctaattttcgtatttttagtagagacgaggtt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766100 117 + 3010529 caacctccacctctgaggttcaaacgattctcctaactcagcctccctagtagctgggattacaggcatctgccaccacgcctggctaatttttgtttgtttagtagagacgaggtt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877034 117 + 163208435 caacctgcacctccgaggttcaaacgattctcctgcctcagcctctctagtagctgggattacaggcatctgccacgacgcctggctaattttcgtatttttagtagagacgaggtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350348 117 - 74971481 caatctccacctccgaggttcaatcgattctcctgcctcagcctccctagtaactgggattacaggcatctgccaccatacccggctaatttttgtatttttagtagagacgaggtt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060484 117 - 78541002 caatctccacctccgaggttcaatcgattctcctgcctcagcctccctagtaactgggattacaggcatctgccaccatacccggctaatttttgtatttttagtagagacgaggtt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456824 117 + 26466322 caatctccacctccgaggttcaatcgattctcctgcctcagcctccctagtaactgggattacaggcatctgccaccatacccggctaatttttgtatttttagtagagacgaggtt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779873 117 + 43916225 caatctccacctccgaggttcaaacgattctcctgcctcagcctccctagtaactgggattacaggcatctgccaccatacccggctaatttttgtatttttagtagagacgaggtt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217764 117 + 75399963 caatctccacctccgaggttcaaacgattctcctgcctcagcctccctagtaactgggattacaggcatctgccaccatacccggctaatttttgtatttttagtagagacgaggtt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765346 117 - 7209941 caatctccacctccgaggttcaaacgattctcctgcctcagcctccctagtaactgggattacaggcatctgccaccatacccggctaatttttgtatttttagtagagacgaggtt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517676 117 + 3907144 caatctccacctccgaggttcaaacgattctcctgcctcagcctccctagtaactgggattacaggcatctgccacaacacccggctaatttttgtatttttagtagagaggaggtt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525312 117 - 44557958 caacctccgccttccgggttcaaacaattctcctgtctcggcctccctagtagctggaattacaggcgtgcaccaccacccacagctaatttttgaatttttagtagagaggaggtt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313560 117 - 5917169 caacctccgccttatgggttcaaacaattctcctgtctcggcctccctagtagctgggattacagacgtgcaccaccacccacagctaatttttgtatttttagtagagacgaggtt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274330 117 - 10531588 caacctccgccttccgggttcaaacaattctcctgtctcggcctccctagtagctgggattataggcgtgcaccaccacccacagctaatttttgtatttttagtagagatgaggtt i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22462234 52 - 129401213 CGGCCTTCATTTCATAGCTATGAGCA-----CTAGCTTCA--------AGCCACTGG-------------------------------------------------GAAACAAG--- i mm10.chr8 C 0 C 0 e canFam3.chr5 80459039 5 + 88915250 I e micMur3.chr20 54925288 828 + 72247402 I e proCoq1.NW_012152729v1 2934810 826 + 9850184 I e dasNov3.JH569970 919880 0 + 1009443 C e saiBol1.JH378225 6330274 1388 + 6628207 I e otoGar3.GL873566 13698243 0 + 13852661 C a score=686763.000000 s hg38.chr16_GL383557v1_alt 40271 103 + 89672 tcgtcatgttctcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattataggcatgagccaccacgcctggccAAAAGGT------------TTTTTGTGT s panTro5.chr16 21466552 103 - 81586097 tcgtcatgttctcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattataggcatgagccaccacacctggccAAAAGGt------------ttttttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533188 101 - 90481686 tcgtcatgttctcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattataggcatgagccaccacacctggccTAAAAGT------------TTTT--TTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766217 102 + 3010529 tcgtcgtgttctcctgacctcaggtgatctgcccaccttggcctcccaaagtgctgggattataggcatgagccaccacgcctggccAAAAGtt------------ttttt-ttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877151 99 + 163208435 tcgccgtgttctcgtgacctcaggtgatctgcccaccttggcctgccaaagtgctgggactacaggcataagccaccacgccaggccAAAAGGT------------TT----TTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350465 106 - 74971481 tcgccacgttctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggccAAAAAGTGTTGGG---------TTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060601 115 - 78541002 tcgccacgttctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggccAAAAAGTGTTGGGttttttttttttttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14456941 113 + 26466322 tcgccacgctctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggccAAAAAGTGTTGGG--ttttttttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20779990 111 + 43916225 tcgccacgttctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggccAAAAAGT----GGttttttttttttgtt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217881 110 + 75399963 tcgccacgttctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggccAAAAAGt----gttttgttttg-ttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765463 111 - 7209941 tcgccacgttctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccaccatgcctggccAAAAAGT----AGttttttttgtttttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517793 101 + 3907144 tcgccatgttctcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattataggcatgaaccaccatgcctggtcAAAAAGT--------------TTGTTTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525429 97 - 44557958 ttgctgggttctcctaacctcaggtgatccacccgccttggcctcccaaagtgctgggattataggcataagccacctcgcctggccAAAAAGT------------------GTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313677 97 - 5917169 tcgctgtgttctcctaacctcaggtgatccacctgcctcggcctccctaagtgctggaattataggcatgagccacctcacctggccAAAAAGT------------------GTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274447 97 - 10531588 tcactgtgttctcccaacctcaggtgatccacccgcctcggcctcccaaagtgctgggattataggcatgagccacctcgcctggccAAAAAGT------------------GTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22462286 10 - 129401213 ---------------AACCTCTTGT------------------------------------------------------------------------------------------ i mm10.chr8 C 0 C 0 s dasNov3.JH569970 919880 18 + 1009443 TCTTCTTGTT----------------------------------------GTTCTGGG--------------------------------------------------------- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80459039 5 + 88915250 I e micMur3.chr20 54925288 828 + 72247402 I e proCoq1.NW_012152729v1 2934810 826 + 9850184 I e saiBol1.JH378225 6330274 1388 + 6628207 I e otoGar3.GL873566 13698243 0 + 13852661 C a score=56823.000000 s hg38.chr16_GL383557v1_alt 40374 9 + 89672 TTTTTTTCT s panTro5.chr16 21466655 9 - 81586097 tttttttct i panTro5.chr16 C 0 I 3 s panPan2.chr16 21533289 9 - 90481686 TTTTTTTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766319 9 + 3010529 tttttttCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877250 9 + 163208435 TTTTTTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350571 9 - 74971481 TTTTTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060716 9 - 78541002 ttttttttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457054 9 + 26466322 ttttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780101 9 + 43916225 ttttttttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58217991 9 + 75399963 tttcttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765574 9 - 7209941 ttttttttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517894 9 + 3907144 TTTTTTTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525526 9 - 44557958 GTTTTTAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313774 9 - 5917169 GTTTTCTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274544 9 - 10531588 GTTTTTTAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13698243 9 + 13852661 TTTTCTTAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462296 9 - 129401213 TTTGCATGT i mm10.chr8 C 0 C 0 s dasNov3.JH569970 919898 7 + 1009443 TTTTTTT-- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80459039 5 + 88915250 I e micMur3.chr20 54925288 828 + 72247402 I e proCoq1.NW_012152729v1 2934810 826 + 9850184 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=920610.000000 s hg38.chr16_GL383557v1_alt 40383 94 + 89672 AAATATGG--TGTACAAGGTTCAACTGTCTGCCCATCACAACTGAGGACTACATAAATAGTAC-TAAATTCAATATTCTGGATGTAAGAATTTATAA s panTro5.chr16 21466667 94 - 81586097 AAATATGG--TGTACAAGGTTCAACTGTCTGCCCATCACAACTGAGGACTACATAAATAGTAC-TAAATTCAATATTCTGGATATAAGAATTTATAA i panTro5.chr16 I 3 C 0 s panPan2.chr16 21533298 94 - 90481686 AAATATGG--TGTACAAGGTTCAACTGTCTGCCCATCACAACTGAGGACTACATAAATAGTAC-TAAATTCAATATTCTGGATATAAGAATTTATAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766328 94 + 3010529 AAATATGG--TGTACAAGGTTCAACTGTCTGCCCATCACAATTGAGGACTACATAAATAGTAC-TAAATTCAATATTCTGGATGTAAGAATTTATAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877259 94 + 163208435 AAATATGG--TGTAAAAGGTTCAACTGTCTGCCCATCACAACTGAGGACTACATAAATAGTGC-TAAATTCAATATTCTGGATGTAAGAATTTATAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350580 84 - 74971481 AAACATGG--TGTAAAAGGTTCAATTGTCTGCCCATCACAAGTGAGGACTACATAAATAGTGC-----------ATTCTGGATGTAAGAATTTATAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060725 84 - 78541002 AAACATGG--TGTAAAAGGTTCAATTGTCTGCCCATCACAAGTGAGGACTACATAAATAGTGC-----------ATTCTGGATGTAAGAATTTATAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457063 84 + 26466322 AAACATGG--TGTAAAAGGTTCAATTGTCTGCCCATCACAAGTGAGGACTACATAAATAGTGC-----------ATTCTGGATGTAAGAATTTATAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780110 84 + 43916225 AAACATGC--TGTAAAAGGTTCAATTGTCTGCCCATCACAAGTGAGGACTACATAAATAGTAC-----------ATTCTGGATGTAAGAATTTATAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218000 84 + 75399963 AAATATGG--TGTAAAAGGTTCAATTGTCTGCCCATCACAAGTGAGGACTACATAAATAGTAC-----------ATTCTGGATATAAGAATTTATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765583 84 - 7209941 AAACATGG--TGTAAAAGGTTCAATTGTCTGCCCATCACAAGTGAGGACTACATAAATAGTAC-----------ATTCTGGATGTAAGAATTTATAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517903 84 + 3907144 AAATATGG--TGTAAAAGGTTCAATTGTCTGCCCATCACAACTGAGGACTACATAAATAGTAC-----------ATTCTGGATGTAAGAATTTATAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525535 77 - 44557958 AAATATGG--TGTAAAGGGTTCAAC-----------------TGAGGACTACATAAATAGTAC-TAAATTCAATATTCTGGATATAAGAATTTATAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313783 77 - 5917169 AAATATGG--TGTAAAGGGTTCAAC-----------------AGAGGACTACATAACTAGTAC-TAAATTCAATATTCTGGATATAAGAATTTATAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274553 77 - 10531588 AAATATGC--TATAAAGGGTTCAAC-----------------TGAGGACTACATAAATAGTAC-TAAATTCAATATTCTGGATATAAGAATTTATAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13698252 95 + 13852661 AAATACGG--TATAAAGGGTTTAACTGTCTGCCCATCATCACTGAATACTCCATAAATAGTACCTAAATTCGGTATTCTGGCTCTAAGAATTTATAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462305 93 - 129401213 TAATATGG--CATAAAGGGCTGAACTGTCTATCCATCACTACTCCATACCACAAAACTGG-AT-GAAATTCAATATTCTGGCTCTAAGAAGTAATAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80459044 95 + 88915250 AAATATAGCATGCAAAGAGCTGAAATGTCTGCCCATTACCGCCTAGTACTACATAAATAGTAC--TACTTCAATATTCTGGTTCTAAGAATTTATAA i canFam3.chr5 I 5 C 0 s dasNov3.JH569970 919905 93 + 1009443 AGCTATCT--TGTA-AAGGTTTAATTGTCTGCCTGCCACCACTGAGTACTACATACATAGTAC-TAAATTTAATATTCTGGCTCTAAGACTTTATAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54925288 828 + 72247402 I e proCoq1.NW_012152729v1 2934810 826 + 9850184 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=543541.000000 s hg38.chr16_GL383557v1_alt 40477 35 + 89672 CCAAATGCTTAGCTAGACCAACTTCAAGGTACACG s panTro5.chr16 21466761 35 - 81586097 CCAAATGCTTAGCTAGACCAACTTCAAGGTACACG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533392 35 - 90481686 CCAAATGCTTAGCTAGACCAACTTCAAGGTACACG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766422 35 + 3010529 CCAAATGCTTAGCTAGACCAACTTCAAGGTACACG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877353 35 + 163208435 CCAAATGCTTAGCTAGACCAATTTCAAGGTACACG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350664 35 - 74971481 CCAAATGCTTAGCTAGACCAATTTCAAGGTACATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060809 35 - 78541002 CCAAATGCTTAGCTAGACCAATTTCAAGGTACATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457147 35 + 26466322 CCAAATGCTTAGCTAGACCAATTTCAAGGTACATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780194 35 + 43916225 CCAAATGCTTAGCTAGACCAATTTCAAGGTACACG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218084 35 + 75399963 CCAAATGCTTAGCTAGACCAATTTCAAGGTACACG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765667 35 - 7209941 CCAAATGCTTAGCTAGACCAATTTCAAGGTACACG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 517987 35 + 3907144 CCAAATGCTTAGCTAGACCAACTTCAAGGTACACG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525612 35 - 44557958 CCAAATGCTTAGCTAGACCAATTTCAAGGCACACA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313860 35 - 5917169 CGAAATGCTTAGCTAGACCAATGTCAAGATACACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274630 35 - 10531588 CCAAATGCTTAGCTAGACCAATTTCAAGGTACACA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2935636 35 + 9850184 CCAAATGTTTAGCTAGACCAATTTCAAAGTACATG i proCoq1.NW_012152729v1 I 826 C 0 s otoGar3.GL873566 13698347 35 + 13852661 CCAAATGTTTAGCTAGACCTATTTCAACATACAcg i otoGar3.GL873566 C 0 I 279 s mm10.chr8 22462398 35 - 129401213 CCAAATACTTACCTAGACCAGTGTCTAGGTACTCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80459139 35 + 88915250 CCAAATGCTTAGCTAGACCAACTTCAAGGTGCACA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 919998 35 + 1009443 CCAAATGCTTAGCTAGACCAATTTCAAGGAACACa i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54925288 828 + 72247402 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=135463.000000 s hg38.chr16_GL383557v1_alt 40512 12 + 89672 -------TTTAGAGTAACA------- s panTro5.chr16 21466796 12 - 81586097 -------TTTAGAGTAACA------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533427 12 - 90481686 -------TTTAGAGTAACA------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766457 12 + 3010529 -------TTTAGAGTAACA------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877388 12 + 163208435 -------TTTAGAGTAATA------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350699 12 - 74971481 -------TTTAGAGTAACA------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060844 12 - 78541002 -------TTTAGAGTAACA------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457182 12 + 26466322 -------TTTAGAGTAACA------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780229 12 + 43916225 -------TTTAGAGTAACA------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218119 12 + 75399963 -------TTTAGAGTAACA------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765702 12 - 7209941 -------TTTAGAGTAACA------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518022 12 + 3907144 -------TTTAGAGTAACA------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525647 12 - 44557958 -------TTTAAAATAACA------- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313895 12 - 5917169 -------TTTAAAGTAACA------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274665 12 - 10531588 -------TTTAAAGTAACA------- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2935671 12 + 9850184 -------ATTAGGGTAACA------- i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22462433 12 - 129401213 -------ATTAGAGTAGCA------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80459174 12 + 88915250 -------TTTAAGGTTACA------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920033 26 + 1009443 tttaaaatttaaaaaaaaaaaaaaaa i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54925288 828 + 72247402 I e saiBol1.JH378225 6330274 1388 + 6628207 I e otoGar3.GL873566 13698382 279 + 13852661 I a score=28063.000000 s hg38.chr16_GL383557v1_alt 40524 8 + 89672 G-TTTTTTT--- s panTro5.chr16 21466808 8 - 81586097 G-TTTTTTT--- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533439 8 - 90481686 G-TTTTTTT--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766469 8 + 3010529 G-TTTTTTT--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877400 9 + 163208435 ATTTTTTTT--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350711 7 - 74971481 A--TTTTTT--- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060856 7 - 78541002 A--TTTTTT--- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457194 7 + 26466322 A--TTTTTT--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780241 7 + 43916225 A--TTTTTT--- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218131 7 + 75399963 A--TTTTTT--- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765714 7 - 7209941 A--TTTTTT--- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518034 8 + 3907144 A-TTTTTTT--- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525659 7 - 44557958 A--tttttt--- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313907 7 - 5917169 A--TTTTTT--- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274677 7 - 10531588 A--TTTTTT--- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2935683 7 + 9850184 A--TTGTTT--- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698661 7 + 13852661 A--TTGTTT--- i otoGar3.GL873566 I 279 C 0 s mm10.chr8 22462445 8 - 129401213 -ACTATTTT--- i mm10.chr8 C 0 C 0 s canFam3.chr5 80459186 8 + 88915250 -ATtttttt--- i canFam3.chr5 C 0 I 189 s dasNov3.JH569970 920059 8 + 1009443 ----GTCTTACC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54925288 828 + 72247402 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=14972.000000 s hg38.chr16_GL383557v1_alt 40532 1 + 89672 T s panTro5.chr16 21466816 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533447 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766477 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877409 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350718 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060863 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457201 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780248 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218138 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765721 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518042 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525666 1 - 44557958 t i calJac3.chr20 C 0 I 308 s cebCap1.NW_016107433v1 3313914 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274684 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 I 1 s proCoq1.NW_012152729v1 2935690 1 + 9850184 T i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698668 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462453 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr5 80459383 1 + 88915250 T i canFam3.chr5 I 189 C 0 s dasNov3.JH569970 920067 1 + 1009443 C i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54925288 828 + 72247402 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=249667.000000 s hg38.chr16_GL383557v1_alt 40533 26 + 89672 GGACACAC-ACCCAAACCACAATCTAT s panTro5.chr16 21466817 26 - 81586097 GGACACAC-ACCCAAACCACAATCTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533448 26 - 90481686 GGACACAC-ACCCAAACCACAATCTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766478 26 + 3010529 GGACACAC-ACCCAAACCACAATCTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877410 26 + 163208435 AGACACAC-ACCCAAACCACAATCTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350719 25 - 74971481 ATACACAC-ACCCAAACCACAATCT-T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060864 25 - 78541002 ATACACAC-ACCCAAACCACAATCT-T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457202 25 + 26466322 ATACACAC-ACCCAAACCACAATCT-T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780249 25 + 43916225 ATACACAC-ACCCAAACCACAATCT-T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218139 25 + 75399963 ATACACAC-ACCCTAACCACAATCT-T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765722 25 - 7209941 ATACACAC-ACCCAAACCACAATCT-T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518043 25 + 3907144 ATACACAC-ACCCAAACCACAATCT-T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525975 23 - 44557958 ---GACAC-ACCCAAACCACAATCTAT i calJac3.chr20 I 308 C 0 s cebCap1.NW_016107433v1 3313915 24 - 5917169 --AGACAC-ACCCAAACCACAATCTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274686 24 - 10531588 --AGATAC-ACCCAAACCACAATCTAT i aotNan1.NW_018500622v1 I 1 C 0 s proCoq1.NW_012152729v1 2935691 26 + 9850184 ACATACAT-GCCCAAGCCACAATCCAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698669 26 + 13852661 ATGTACCT-GCCCAAGCCATAATCTAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462454 26 - 129401213 CCAAACCT-ACATCAACTGTGTTGTGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80459384 27 + 88915250 ATACTCACTGCCTATGCCACAGTCTAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920068 25 + 1009443 --ACACACTGCTCAAGCCACAACCTAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54925288 828 + 72247402 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=1930942.000000 s hg38.chr16_GL383557v1_alt 40559 133 + 89672 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-ATGTCTAGCCCCACCTAGACATGCAATATAAATAAGGTTTATAAATAGGA-TATTATAAAGGTGGGACACTGGAACTTCACAACT-GGTGTACATGAAA s panTro5.chr16 21466843 133 - 81586097 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-ATGTCTAGCCCCACCTAGACATGCAATATAAATAAGGTTTATAAATAGGA-TATTATAAAGGTGGGACACTGGAACTTCACAACT-GGTGTACATGAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533474 133 - 90481686 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-ATGTCTAGCCCCACCTAGACATGCAATATAAATAAGGTTTATAAATAGGA-TATTATAAAGGTGGGACACTGGAACTTCACAACT-GGTGTACATGAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766504 133 + 3010529 AATTTTACTCCTTCTATTAACACT-AATTTCCAAGCA-ATGTCTAGCCCCACCTAGACATGCAATATAAATAAGGTTTATAAATAGGA-TATTATAAAGGTGGGACACTGGAACTTCACAACT-GGTGTACATGAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877436 133 + 163208435 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-GTGTCTAGCCCCACCTAGACGTGCAATATAAATAAGGTTTATAAATAGGA-TATCATAAAGGTGGCACACTGGAATTTC-CAACTAAGTGTACTTGAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350744 130 - 74971481 AATTTTACTC---CTATTAACACT-AATTTCCGAGCA-GTGTCTAGCCCCACCTAGACGTGCAATATAAATAAGGTTTATAAATAGGA-CATTATAAAGGTGGGACACTGGAATTTCACAACT-GGTGTACATGAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21060889 130 - 78541002 AATTTTACTC---CTATTAACACT-AATTTCCGAGCA-GTGTCTAGCCCCACCTAGACGTGCAATATAAATAAGGTTTATAAATAGGA-CATTATAAAGGTGGGACACTGGAATTTCACAACT-GGTGTACATGAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457227 130 + 26466322 AATTTTACTC---CTATTAACACT-AATTTCCGAGCA-ATGTCTAGCCCCACCTAGACATGCAATATAAATAAGGTTTATAAATAGGA-CATTATAAAGGTGGGACACTGGAATTTCACAACT-GGTGTACATGAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780274 133 + 43916225 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-GTGTCTAGCCCCACCTAGACGTGCAATATAAATAAGGTTTATAAATAGGA-CATTATAAAGGTGGGACACTGGAATTTCACAACT-GGTGTACATGAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218164 133 + 75399963 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-GTGTCTAGCCCCACCTAGACGTGCAATATAAATAAGGTTTATAAATAGGA-CATTATAAAGGTGGGACACTGGAATTTCACAACT-GGTGTACATGAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765747 133 - 7209941 AATTTTACTCCTTCTATTAACACT-AATTTCCGAGCA-GTGTCTAGCCCCACCTAGATGTGCAATATAAATAAGGTTTATAAATAGGA-CATTATAAAGGTGGGACACTGGAATTTCACAACT-GGTGTACATGAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518068 133 + 3907144 AAATTTACTCCTTCTATTAATACT-AATTTCTGGGCA-GTGTCTAGCCCCACCTAGACGTGCAATATAAATAAGGTTTATAAATAGGA-TATTATAAAGGTGAGACACTGGAATTTCACAACT-GGTGTACATGAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21525998 132 - 44557958 AATTTTACTCCTTCTATTAACACTAAATTTCCGAGCC-GTGTCTAGCCCCACCTAGACATCCAAAATAAACAAGGTTTACAAATAGGA-TATTATAAAGGTGGGACAC--GAATTTCACAACT-GGTGTACATGAAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3313939 132 - 5917169 AATTTTACTCCTTCTATTAACACTAAATTTCCGAGCA-GTGTCTAGCCCCACCTAGACATCCAATATAAACAAGGTTTATAAATAGGA-TATTATAAAGGCAGGACAC--GAATTTCACAACT-GGTGTACATAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274710 132 - 10531588 AATTTTACTCCTTCTATTAACACTAAATTTCCGAGCA-GTGTCTAGCCCCACCTAGACATCCAATATAAACAAGGTTTACAAATAGGA-TATTATAAAGGTGGGACAC--GAATTTCACAACT-GGTGTACATGAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54926116 129 + 72247402 AATTTTACTCCTTCTATTAACACT-AATTTCTGAGCA-ATGTCTAGCTCCACTTATAAGTGGGATATAAATAAGATTTACAAATAAAA-TGATATAAAGATAGCACACTGGAATTCCACAACT-GGAGCAT----AG i micMur3.chr20 I 828 C 0 s proCoq1.NW_012152729v1 2935717 133 + 9850184 AATTTTACTCCTTCTATTAACACT-AATTTCTGAGCA-GTGTCTAGCCACACCTATAAGTGGGATATAAATAAGATTTACAAAGAAGA-TGATACAAAGGTAGCACACCGGAATTCCACAACT-GGAGCCTATTAAG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698695 133 + 13852661 AATTTTACTCGTAATATTATCACT-AATTTCTGAGCA-GTGTCTAGCCCCACCTATAAGTGGGATACAAATAAGATTTACAAATAAGA-CCTTATAAAGGTAGCACACTGGAATTGCACAACT-GGAGCCTATGAGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22462480 132 - 129401213 --TTTTACTTCTTTCACTAACGCT-AGTTTCTGGGCACTTGACTGGCCCTACCTAAAATTGGGATATAAACAAGACTCATAAATAAGA-CATTATAAAATTGGGGCATTGCAGTTTCACAATT-AGAGCACTTAAAA i mm10.chr8 C 0 I 831 s canFam3.chr5 80459411 130 + 88915250 AATTTTGCTCCATTTATTAACACT-AATTTCGGAGCA-GTGTCTGGCCCCACC----CATGAGATATAAATAAGACTTATAAATAGGATTATCATAGAGATGGGACACTGGAATTTCACACTC-AGAGCACATGCAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920093 132 + 1009443 AATTTAACTTCTTTT-TTAACACT-AATTTCTGAGCA-GTGTCTAGCCCCACCTATAAGTGAAATATAAACAGGATTTAAAAATAGGA-TATTACAACGGTAGGACCCTTTAATTTCACAATT-GGGGCACAGTAAA i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6330274 1388 + 6628207 I a score=855374.000000 s hg38.chr16_GL383557v1_alt 40692 71 + 89672 -TCATTTCTGGTAAATCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG s panTro5.chr16 21466976 71 - 81586097 -TCATTTCTGGTAAATCAGTATTT-TTCCAAATATTCACAA-GCTTATTTAT-AAGAAAGTGAAAATCCATTGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533607 71 - 90481686 -TCATTTCTGGTAAATCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766637 71 + 3010529 -TCATTTCTGGTAAATCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877569 71 + 163208435 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350874 71 - 74971481 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061019 71 - 78541002 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457357 71 + 26466322 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780407 71 + 43916225 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAA-AAGAAAGTGAAAATCCATTGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218297 71 + 75399963 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765880 71 - 7209941 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518201 71 + 3907144 -TCATTTCTGGTAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAAGTGAAAATCCATTGTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526130 70 - 44557958 -TCATTTCTGATAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAACTGAAAAT-TATTGTG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3314071 70 - 5917169 -TCATTTCTGATAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAACTGAAAAT-TATTGTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274842 70 - 10531588 -TCATTTCTGATAAACCAGTATTT-TTCCAAATATTCACAA-GCTGATTTAT-AAGAAACTGAAAAT-TATTCTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54926245 70 + 72247402 -TCATTTCTTGCAAGCTAATATTTCTTTCCAACATTCACAATACAGATTTAT--AAAAGGTGAAAAT-CATTTT- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2935850 71 + 9850184 -TCATTTCTTGCAAGCTAATATTTTTTTCCAACATTCACAATACAGATTTAT--AAAAAGTTAAAAT-CATTTTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698828 72 + 13852661 -TCATTTCTTGTAAGCTAATATTTTTTCTAAATATTCACAGTACGAATTTAT-AAAAAAGTGGAAAT-CATTTTA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80459541 63 + 88915250 ----------ACAAACTAACATTT-TTCCAAATATTTACAA-CCCGATTTGGAAAAAAAGTGAAAAATCACTCTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920225 71 + 1009443 TTACTGACTTGCACACTAATATTT-TTTCAAATATTCCCAA-GCAGAGCTGG-AGAAAAATGAAAATCCGTTTC- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22462612 831 - 129401213 I e saiBol1.JH378225 6330274 1388 + 6628207 I a score=12450.000000 s hg38.chr16_GL383557v1_alt 40763 1 + 89672 C s panTro5.chr16 21467047 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533678 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766708 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877640 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350945 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061090 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457428 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780478 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218368 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765951 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518272 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526200 1 - 44557958 C i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3314141 1 - 5917169 C i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274912 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54926315 1 + 72247402 G i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2935921 1 + 9850184 G i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698900 1 + 13852661 C i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22463443 1 - 129401213 c i mm10.chr8 I 831 C 0 s canFam3.chr5 80459604 1 + 88915250 C i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920296 1 + 1009443 C i dasNov3.JH569970 C 0 C 0 e saiBol1.JH378225 6330274 1388 + 6628207 I a score=2493208.000000 s hg38.chr16_GL383557v1_alt 40764 159 + 89672 CAAGTTGGACTTCTGGCCTCTCGGTTTGACGATTGGTCCTTCTTCACCAGCAGCCCCCAGCCCTTCCCTTCTGTCCTTCCTCTGCCAGGAATACCCTCCTGACTCATCCCTGCCTGCCTATGTCCATCACTTC-TTGGAGACCT----------GGCTCA--------AGATTCAGCT s panTro5.chr16 21467048 160 - 81586097 CAAGTTGGACTTCTGGCCTCTCGGTTTGACGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagacct----------ggctca--------agattcagct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533679 157 - 90481686 CAAGTTGGACTTCTGGCCTCTCGGTTTGACGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcctctgccaggaatac---cctgactcatccctgcctgcctatgtccatcacttccttggagacct----------ggctca--------agattcagct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766709 160 + 3010529 CAAGTTGGACTTCTGGCCTCTCGGTTTGACGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagacct----------ggctca--------agattcagct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877641 160 + 163208435 CAAGTTGGACTTCTTGCCTCTCGGTTTGATGATTGGTCCTTCTTCACCAGCAGCCCCCAGCCCTTCCCTTTTGTCCTTCCTCTGCCAGGAATACCCTCCTGACTCATCCCTGCCTGCCTGTGTCCATCACTTCCTTGGAGACCT----------GGCTCA--------AGATTCAGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21350946 157 - 74971481 CAAGTTGGACTTCTGGCCCCTCGGTT---TGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagaccc----------ggctca--------agatttagct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061091 157 - 78541002 CAAGTTGGACTTCTGGCCCCTCGGTT---TGATTGGTCCTTCTTCACCAGCAGCCCCCAGCCCTTCCCTTCTGTCCTTCCTCTGCCAGGAATACCCTCCTGACTCATCCCTGCCTGCCTATGTCCATCACTTCCTTGGAGACCC----------GGCTCA--------AGATTTAGCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457429 157 + 26466322 CAAGTTGGACTTCTGGCCCCTCGGTT---TGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagaccc----------ggctca--------agattcagct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780479 157 + 43916225 CAAGTCGGACTTCTGGCCCCTCGGTT---TGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagaccc----------ggctca--------agattcagct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218369 157 + 75399963 CAAGTTGGACTTCTGGCCCCTCGGTT---TGATTGGTCCTTCTTCACCAGCAGCCCCCAGCCCTTCccttctgtccttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagaccc----------ggctca--------aaattcagct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6765952 157 - 7209941 CAAGTCGGACTTCTGGCCCCTCGGTT---TGATTGGTCCTTCTTCACCAGCAGCCcccagcccttcccttctgttcttcctctgccaggaataccctcctgactcatccctgcctgcctatgtccatcacttccttggagaccc----------ggctca--------agattcagct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518273 156 + 3907144 CAAGTTGGACTTCTGGCCCCTCGGTTTGATGATTGGTCCTTCTTCACCAGCAGCCCCCAGCccttcccttctgtccttcccctgccaggaataccctcctgactcatc----cctgcctatgtccatcacttccttggagaccc----------ggctca--------agattcagct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526201 123 - 44557958 CAAGTTGGACTTCTGGCCTCTCGGTTTGATGATTGGT------------------------CCTTCCCTTCTG-TCTTCCTCTGCCAGGAATACTCTCCTGACTCATCCCTGCCTGCCTATGTCCATCACTTCCTTGGAGAACT----------GGC--------------------T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6331662 160 + 6628207 CAAGTTGGACTTTTGGCCTCTCGGTTTGATGATTGGTCCTTCTTCACCAGCAGTCCCTAGCCCTTCCCTTCTGTTCTTCCTCTGCCAGGAATACTCTCCTGACTCATCCCTGCCTGCCTATGTCCATCACTTCCTTGGAGAACT----------GGCTCA--------AGATTCAGTT i saiBol1.JH378225 I 1388 C 0 s cebCap1.NW_016107433v1 3314142 160 - 5917169 CAAGTTGGAGTTCTGGCCTCTCGGTTTGATGATTGGTCCTTCCTCACCAGCAGTCCCTAGCCCTTCCCTTctgttcttcctctgccaggaatactctcctgactcatccctgcctgcctatgtccatcacttccttggagacct----------ggctca--------agattcagtt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9274913 160 - 10531588 CAAGTTGGACTTTTGGCCTCTCGGTTTGATGATTGGTCCTTCCTCACCAGCAgcccctagcccttcccttctgttcttcctctgccaggaatactctcctgactcatccctgcctgcctatgtccatcacttccttggagaact----------ggctca--------agattcagct i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54926316 151 + 72247402 CAAGTTAGACTTCTTGCCTCTTGGTTTAATAATTGGTCCCTCttcaa-------ccccagcccttctctcctgt--tttctctgccaggaaaaccctcctgactcatctctgcctgtctatgtccatcacttccttggagacct----------ggctca--------aaattcagct i micMur3.chr20 C 0 I 212 s proCoq1.NW_012152729v1 2935922 153 + 9850184 CAAGTTAGACTTCTTGCCTCTTGGTTTAATAACTGGCCCCTCttcaa-------ccccagcccttttctcctgttctttctatgccaggaaaaccctcctgactcatctctgcctgcctacgtccatcacttccttggagacct----------ggctca--------agattcagct i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13698901 153 + 13852661 CAAGTTAGACT-------TCTTGATTTAATGATTGGTCCCTCCACAACCCCAGTCCCCAGCCCTTCCCTCCCTTTCTTTCTCTGCCAGGAATACCCTCCTGACTCATCTCTGCCTGTCTGTGTCCATCACTTCCTTGGAGACCT----------GGCTCA--------AGATTCAGCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22463444 162 - 129401213 taagttctaattcTG--CCCTTAGTC---TGGTGGTTTTCTCCCCAA-------CTTCAACCCCTCCGTTCAGTTCT---CCTGCCAGCAAT-CCCTCCTGACTCATCTCTGCACACTTATATCCACCACTTCCTGGAAAGCCCTCCTGGACTAAGCCCATTTCCATCAAATTCTTTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80459605 156 + 88915250 CAAGCTGGACTTCTGACCTCTCAGTTTCATGACTGGTCTCTGCCTACCCTTCTTCCCCACCCATTCCCTTCtgctcttcctctgccaggaataccctcctgactcatc----tctgtctatgtccattacttccttagagacct----------ggctca--------ggattcagct i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920297 143 + 1009443 AAAGTCAGACTTCTAACCTCTTAGTC---TGATGGTTCAGTATCCAC-------GCCCACCTCTTTCCTCCAG---ttcctctgccgggaatactctcctgactcatc----tctgcctaagtccatgacttccttggagacct----------ggctca--------agattctgct i dasNov3.JH569970 C 0 C 0 a score=2353739.000000 s hg38.chr16_GL383557v1_alt 40923 178 + 89672 TCGG----------GAAAAAGTCCTCC--------------------------------------------------------------CTGGCTAATTCC-ATCTCC------------------------------------ACTAACTATTTTCTAACTTTGCATTCCTTTGGCATTTAAGTATAGTTT-CACGACGTAATCACCAAC--TTCATTCCTTTCCTCCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAACTAGAGACCAAGTA-GGGACAGCAT s panTro5.chr16 21467208 179 - 81586097 tcgg----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc------------------------------------actaactattttctaactttgcattcctttggcatttaaatatagtttgcacgacgtaatcaccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-gggacagcat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21533836 179 - 90481686 tcgg----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc------------------------------------actaactattttctaactttgcattcctttggcatttaaatatagtttgcacgacgtaatcaccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-aggacagcat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 766869 179 + 3010529 tcgg----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc------------------------------------actaactattttctaactttgcattcctttggcatttaaatatagtttgcacgacgtaatcaccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-gggacagcat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877801 179 + 163208435 TCGG----------GAAAAAGTCCTCC--------------------------------------------------------------CTGGCTAATTCC-ATCTCC------------------------------------ACGAACTATTTTCTAACTTTGTATTCCTTTGGCATTTAAATATAGTTTGCACGACGTAATCACCAAC--TTCATTCCTTTCCTCCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAACTAGAGACCAAGTA-GGGACAGCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21351103 175 - 74971481 ccgg----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc----------------------------------------actactttctaactttgcattcctttggtatttaaatatagtttgcacgacgtaatcgccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-gggacagcat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061248 175 - 78541002 CCGG----------GAAAAAGTCCTCC--------------------------------------------------------------CTGGCTAATTCC-ATCTCC----------------------------------------ACTACTTTCTAACTTTGCATTCCTTTGGTATTTAAATATAGTTTGCACGACGTAATCGCCAAC--TTCATTCCTTTCCTCCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAACTAGAGACCAAGTA-GGGACAGCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457586 175 + 26466322 ccgg----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc----------------------------------------actactttctaactttgcattcctttggtatttaaatatagtttgcacgacgtaatcgccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-gggacagcat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780636 175 + 43916225 ccgg----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc----------------------------------------actactttctaactttgcattcctttggtatttaaatatagtttgcacgacgtaatcgccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-gggacagcat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218526 174 + 75399963 ccgg----------gaaaaagtcctcc--------------------------------------------------------------ctggcTAATTCC-ATCTCC----------------------------------------ACTACTTTCTAACTTTGCATTCCTTTGGTATTTAAATATAGTTTGCACGACGTAATCGCCAAC--TTCATTCCTTTCCTCCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAACTAGAGACCAAGTA-GGGACAGCA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6766109 175 - 7209941 ccag----------gaaaaagtcctcc--------------------------------------------------------------ctggctaattcc-atctcc----------------------------------------actactttctaactttgcattcctttggtatttaaatatagtttgcacgacgtaatcgccaac--ttcattcctttcctccctataagttgttttgcatttt---tctatcatttctccaactagagaccaagta-gggacagcat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518429 175 + 3907144 ccgg----------gaaaaagtactcc--------------------------------------------------------------ctggctaattcc-atctcc----------------------------------------actactttctaactttgcattcctttggtatttaaatatagtttgcacgccgtaatCGCCAAC--TTCACTCCTTTCCTCCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAACTAGAGACCAAGTA-GGGACAGCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526324 179 - 44557958 CAGG----------GAAAAAGTCCTGC--------------------------------------------------------------CTGCCTAATTCC-ATCTCT------------------------------------ACTAACTACTTTCTAACTTTGCATTCTCTTGGGACTTAAATACAGTTTGCACGACATAATCACCAAC--TTCATCCCTTTCCTTCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAATAAGAGACCAAGAA-GGGACAGCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6331822 177 + 6628207 CAAG----------GAAAAAGTCCTCC--------------------------------------------------------------CTGCCTAATTCC-ATCTCC----------------------------------------ACTACTTTCTAACTTTGCATTCCCTTGGGACTTAAATATAGTTTGCACGACATAACCACCAACGGTTCATCCCTTTCCTTCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAATAAGAGACCAAGAA-GGGACAGCAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3314302 179 - 5917169 cagg----------gaaaaagtcctac--------------------------------------------------------------ctgcctaattcc-atctcc------------------------------------actaactactttcttactttgcattcctttgggacttaaatatagtttgcacgacataatCACCAAC--TTCATCCCCTTCCTTCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCTCCAACAAGAGACCAAGAA-GGGACAGCAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9275073 179 - 10531588 cagg----------gaaaaagtcctcc--------------------------------------------------------------ctgcctaattcc-atctcc------------------------------------actaactactttctaactttgcattcccttgggacttaaatatagtttgcacgacataatcaccaac--ttcatccctttccttcctataaattgttttgcatttt---tctatcattTCTCCAACAAGAGACCAAGAA-GGGACAGCAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2936075 167 + 9850184 ----------------------cctcc--------------------------------------------------------------ctggctaacccc-atttcc------------------------------------actaactacttcctaactttgcattcttttggcatttatatacagtttgcacTCTATAACCAACAAC--TTGACGTTTTTCCTCCCTATAAGTTGTTTTGCATTTT---TCTATCATTTCCTAAATTACAAACCAAACA-AGGACAGCAT i proCoq1.NW_012152729v1 C 0 I 49 s otoGar3.GL873566 13699054 165 + 13852661 ----------------------CCTCC--------------------------------------------------------------CTGACTAAGCCC-ATTTCC------------------------------------ACTAACTACTTCCTCAC-TTGCATTCTCTTGGCATTTATATACAGTTTGCACTCTACAACCAAGAAC--TTGGTATTTTTCCT-CTTATAAGCTGTTTTGCATTTT---TCTATCACTTCCCTGATTAGAAACAAAGTA-GGGACAGCAT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22463606 281 - 129401213 CTGGAtttgtttttaacagagtcctactgcgtagccctagctgtcctggaacgcattacgtagaccaggctcctcttaaactcatggatctgcctgtctct-gcctcttgagtacaaggctgtaaaCCACGCCAAAATGCTACCAGCAAATACGCCTTAAATTTGTGATCCCTTAGCATCT---TGTACCTTGTAC--CAGAGTCAAGCAC--TTGATGTTATTCCTCCCTAGAAGTTGTTTTGCA-TTT---TCTATCATTTCCCACCGCAGAGATACAACA-GGGACAGCAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80459761 159 + 88915250 cctt----------gaaaaaggcctcc--------------------------------------------------------------ctgacTAATCCCGATTGCC----------------------------------------ACTACTTCCTAACTTTGCATTCCCTTGGCATTTATATATAGTTTGCATTACATAATCACTTAA--CTTA----------------AAGTCGTTTTGCATTTT---TCCATCACGTCCCCAACTAGAGACCAAAAA-GAGA-ACCAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920440 156 + 1009443 ----------gcctgaaaaagtcctcc--------------------------------------------------------------ctgactaatccccaTTTCC------------------------------------ACTAACTACTTCCTAATTCTGCATTCCCTTGACACT----TATAGTTTTCACTACATAATC---AAG-----------------------AGTTGTTTTGCATTTTCCCCCTACCATTTCCTCAACTAGAGGCCAAGCAGGGGACAGCAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54926467 212 + 72247402 I a score=11504.000000 s hg38.chr16_GL383557v1_alt 41101 1 + 89672 C s panTro5.chr16 21467387 1 - 81586097 c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534015 1 - 90481686 c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 767048 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877980 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21351278 1 - 74971481 c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061423 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457761 1 + 26466322 c i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780811 1 + 43916225 c i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6766284 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518604 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526503 1 - 44557958 C i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6331999 1 + 6628207 C i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3314481 1 - 5917169 C i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9275252 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80459920 1 + 88915250 T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920596 1 + 1009443 C i dasNov3.JH569970 C 0 I 109 e micMur3.chr20 54926467 212 + 72247402 I e mm10.chr8 22463887 0 - 129401213 C e proCoq1.NW_012152729v1 2936242 49 + 9850184 I e chlSab2.chr5 58218700 0 + 75399963 C e otoGar3.GL873566 13699219 0 + 13852661 C a score=366579.000000 s hg38.chr16_GL383557v1_alt 41102 30 + 89672 TTCTTTTATA-TTCTTTTCAACACAGCTAGC s panTro5.chr16 21467388 30 - 81586097 ttcttttata-ttcttttCAACACAGCTAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534016 30 - 90481686 ttcttttata-ttcttttCAACACAGCTAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 767049 30 + 3010529 ttcttttata-ttcttttCAACACAGCTAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53877981 30 + 163208435 TTCTTTTATA-TTCTTTTTAACACAGCTAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21351279 30 - 74971481 ttcttttata-ttcttttCAACACAGCTAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061424 30 - 78541002 TTCTTTTATA-TTCTTTTCAACACAGCTAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457762 30 + 26466322 ttcttttata-ttcttttCAACACAGCTAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780812 30 + 43916225 ttcttttata-ttcttttCAACACAGCTAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218700 29 + 75399963 -TCTTTTATA-TTCTTTTCAACACAGCTAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6766285 30 - 7209941 ttcttttata-ttcttttCAACACAGCTAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518605 20 + 3907144 TTCTTTTA-----------AACACAGCTAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526504 30 - 44557958 TTCTTTCATA-TTCTTTTCAACACAGCTAGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332000 27 + 6628207 TTCTTTCATA-TTC---TCAACACAGCTAGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3314482 30 - 5917169 TTCTTTCATA-TTCTTTTCAATACAGCTAGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9275253 30 - 10531588 ATCTTTCATA-TTCTTTTCAACACAGCTAGC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13699219 29 + 13852661 --CTTCTATATTTCTCTTCTACAGAGCTAGC i otoGar3.GL873566 C 0 I 332 s mm10.chr8 22463887 28 - 129401213 --CTTTCACA-TTCTCTGTTATACAGCTAGC i mm10.chr8 C 0 I 3 s canFam3.chr5 80459921 30 + 88915250 ATGCTTTACA-TCCTCTTCTATACATCCAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920706 30 + 1009443 TTCTTTAATA-CTCTTTTCTACATAGACCGC i dasNov3.JH569970 I 109 I 21 e micMur3.chr20 54926467 212 + 72247402 I e proCoq1.NW_012152729v1 2936242 49 + 9850184 I a score=117103.000000 s hg38.chr16_GL383557v1_alt 41132 13 + 89672 CATAA-------------------------TCACCAGT s panTro5.chr16 21467418 13 - 81586097 CATAA-------------------------TCACCAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534046 13 - 90481686 CATAA-------------------------TCACCAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 767079 13 + 3010529 CATAA-------------------------TCACCAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878011 13 + 163208435 AATCA-------------------------CCACCAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21351309 13 - 74971481 AATAA-------------------------TCACCAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061454 13 - 78541002 AATAA-------------------------TCACCAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457792 13 + 26466322 AATAA-------------------------TCACCAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780842 13 + 43916225 AATAA-------------------------TCACCAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218729 13 + 75399963 AATAA-------------------------TCACCAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6766315 13 - 7209941 AATAA-------------------------TCACCAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518625 13 + 3907144 AATAA-------------------------TCACCAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526534 13 - 44557958 AATAA-------------------------TCACCAGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332027 13 + 6628207 AATAA-------------------------TCACCAGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3314512 13 - 5917169 AATAA-------------------------TCACCAGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9275283 13 - 10531588 AATAA-------------------------TCACCAGT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22463918 34 - 129401213 AATAAA----TGCTCCTGGAATGACTTGACTCAACAGC i mm10.chr8 I 3 I 2 s canFam3.chr5 80459951 37 + 88915250 AATAAATGCCTGCTCCTCGAATGACTGAA-TCACCAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920757 13 + 1009443 CTGAA-------------------------TCTCCAGA i dasNov3.JH569970 I 21 C 0 e micMur3.chr20 54926467 212 + 72247402 I e proCoq1.NW_012152729v1 2936242 49 + 9850184 I e otoGar3.GL873566 13699248 332 + 13852661 I a score=232140.000000 s hg38.chr16_GL383557v1_alt 41145 16 + 89672 GAAAGAAAGCTGACCG s panTro5.chr16 21467431 16 - 81586097 GAAAGAAAGCTGACCG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534059 16 - 90481686 GAAAGAAAGCTGACCG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 767092 16 + 3010529 GAAAGAAAGCTGACCG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878024 16 + 163208435 GAAAGAAAGCTGACCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21351322 16 - 74971481 GAAAGAAAGCTGACCG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061467 16 - 78541002 GAAAGAAAGCTGACCG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457805 16 + 26466322 GAAAGAAAGCTGACCG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780855 16 + 43916225 GAAAGAAAGCTGACCG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218742 16 + 75399963 GAAAGAAAGCTGACCG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6766328 16 - 7209941 GAAAGAAAGCTGACCG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518638 16 + 3907144 TAAAGAAAGCTGACAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526547 16 - 44557958 GAAAGAAAGCTGACCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332040 16 + 6628207 GAAAGAAAGCTGACCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3314525 16 - 5917169 GAAAGAAAGCTGACCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9275296 16 - 10531588 GAAAGAAAGCTGACCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54926679 16 + 72247402 GAAAGAAAGGTGATCG i micMur3.chr20 I 212 C 0 s proCoq1.NW_012152729v1 2936291 16 + 9850184 GAAAGAGAGCTGATCA i proCoq1.NW_012152729v1 I 49 C 0 s mm10.chr8 22463954 16 - 129401213 AAAACGGAGCTGGTCT i mm10.chr8 I 2 C 0 s canFam3.chr5 80459988 16 + 88915250 GAGAGAAAGGCAACTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920770 15 + 1009443 GAAAGAATGC-AATCG i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13699248 332 + 13852661 I a score=11553125.000000 s hg38.chr16_GL383557v1_alt 41161 742 + 89672 CTCAAAAATTTCTGAAGA---AAGCAGCTGAC----TTTTC-------GTTTATA-----ATTTACAATACTC-TATCA-CCTCCAACATGCATGAGTCCTTAGA-GGAGAGGAATTTTATTTTTGCCTTAGTT---CAAATTCAT---CATGAAAGATCCAACTTACAGATCACATACATATAACTTAACATAAA--GAATAATCCTGGTTATTGAAACCTATCTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCCAAGAGTCTTGAAGCAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCGTTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAATGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCGAGC-ATACCGCTGGCATCGGTGAAGATGG-C-------------CTTTTTTTTTTTTTAATAGACCCGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGGTGGG--GCTTCATAGGCAGCTGCTTTTTACTC---------AATCTCAGCCGAGTCTTCC----CTAGGGGCTGC-AAGCCACACTTCGGC s panTro5.chr16 21467447 742 - 81586097 CTCAAAAATTTCT-AAGA---AAGCAGCTGAC----TTTTC-------GTTTATA-----ATTTACAATACTC-TATCA-CCTCCAACATGCATGAGTCCTTAGA-GGAGAGGAATTTTATTTTTGCCTTAGTT---CAAATTCAT---CATGAAAGATCCAACTTACAGATCACATACATATAACTTAACGTAAA--GAATAATCCTGGTTATTGAAACCTATCTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCCAAGAGTCTTGAAGCAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAATGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCGAGC-ATACCGCTGGCATCGGTGAGGATGGAC-------------TTTTTTTTTTTTTTAATAGACCCGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGGTGGG--GCTTCATAGGCAGCTGCTTTTTACTC---------AATCTCAGCCGAGTCTTCC----CTAGGGGCTGC-AAGCCACACTTCGGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534075 740 - 90481686 CTCAAAAATTTCT-AAGA---AAGCAGCTGAC----TTTTC-------GTTTATA-----ATTTACAATACTC-TATCA-CCTCCAACATGCATGAGTCCTTAGA-GGAGAGGAATTTTATTTTTGCCTTAGTT---CAAATTCAT---CATGAAAGATCCAACTTACAGATCACATACATATAACTTAACGTAAA--GAATAATCCTGGTTATTGAAACCTATCTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCCAAGAGTCTTGAAGCAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAATGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCGAGC-ATACCGCTGGCATCGGTGAGGATGGAC---------------TTTTTTTTTTTTAATAGACCCGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGGTGGG--GCTTCATAGGCAGCTGCTTTTTACTC---------AATCTCAGCCGAGTCTTCC----CTAGGGGCTGC-AAGCCACACTTCGGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 767108 746 + 3010529 CTCAAAAATTTCTGAAGA---AAGCAGCTGAC----TTTTC-------GTTTATA-----ATTTACAATACTC-TATCA-CCTCCAACATGCATGAGTCCTTAGA-GGAGAGGAATTTTATTTTTGCCTTAGTT---CAAATTCAT---CATGAAAGATCCAACTTACAGATCACATACATATAACTTAACGTAAA--GAATAATCCTGGTTATTGAAACCTATCTTGTGATTTGCCATTTCAAGGTTCTTACAAAAACCCCAAGAGTCCTGAAGCAGCGCGCCTGTGAGTAGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAATGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTCGTGGTTTGCCCGAGC-ATACCGCTGGCATCGGTGAGGATGGAC----------tttttttttttttttttAATAGACCCGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TATGCGCCAATCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGGTGGA--GCTTCATAGGCAGCTGCTTTTTACTC---------AATCTCAGCCGAGTCTTCC----CTAGGGGCTGC-AAGCCACACTTCGGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878040 747 + 163208435 CTCAAAAATTTCTGAAGA---AAGCAACTGAC----TTTTC-------GTTTATA-----ATTTACAATACTC-TATCA-CCTCCAACATGCATGAGTCCTTAGA-GGAGAAGAATTTTATTTTTGCCTTAGTT---CAAATTCAT---CATGAAAGATCCAATTTACAGATCACATACATATAACTTAACGTAAG--GAATAATCCTGGTTATTGAAACCTATCTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAAGAGTCTTGAAGCAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--TTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAATGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCGAGC-ATACCGCTGGCATCGGTGTGGATGGAC---------ttttttttttttttttttAATAGACCCGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CTGTTCGCTCTCCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGGTGGG--GCTTCATAGGCAGCTGCTTTTTACTC---------AATCTCAGCCGAGACTTCC----CTAGGGGCTGC-AAGCCACACTTCGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21351338 733 - 74971481 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TCTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTTCTTAGA-GGAGAGGAATTTTATTTTTGCCCTAGTT---CAAATTCAT---CA-GAAAGATCCAACTTACAGATCACATACATATAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGTTGCCCAAGC-ATACAGCTGGCATCGGTGTGGACGGAC------tttttttttttttttttttttAATAGACCCACCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGTAACACTTCGGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21061483 731 - 78541002 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TCTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTTCTTAGA-GGAGAGGAATTTTATTTTTGCCCTAGTT---CAAATTCAT---CACGAAAGATCCAACTTACAGATCACATACATATAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGTTGCCCAAGC-ATACAGCTGGCATCGGTGTGGACGGA---------CttttttttttttttttttAATAGACCCACCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGTAACACTTCGGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14457821 724 + 26466322 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TCTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTTCTTAGA-GGAGAGGAATTTTATTTTTGCCCTAGTT---CAAATTCAT---CACGAAAGATCCAACTTACAGATCACATACATATAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGTTGCCCAAGC-ATACAGCTGGCATCGGTGTGGAC------------tttttttttttttttttttAATAGACCCACCCGCCCCGAGGAGCCAGAG----GTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGTAACACTTCGGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20780871 732 + 43916225 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TCTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTTCTTAGA-GGAGAGGAATTTTATTTTTGCCCTAGTT---CAAATTCAT---CACGAAAGATCCAACTTACAGATCACATACATATAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGCTGCCCAAGC-ATACAGCTGGCATCGGTGTGGACGGAC--------tttttttttttttttttttAATAGACCCACCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCAGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TGAGGGGCTGC-AAGTAACACTTCGGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58218758 728 + 75399963 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TCTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTTCTTAGA-GGAGAGGAATTTTATTTTTGCCCTAGTT---CAAATTCAT---CATTAAAGATCCAACTTACAGATCACATACATATAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--TTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATTTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTTTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGTTGCCCAAGC-ATACCGCTGGCATCGGTGT-GACGGAC-----------TTTTTTTTTTTTTTTAAATAGATCCGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAA----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGTAACACTTCGGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6766344 732 - 7209941 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TCTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTTCTTAGA-GGAGAGGAATTTTATTTTTGCCCTAGTT---CAAATTCAT---CACGAAAGATCCAACTTACAGATCACATACATATAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACCCTAA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAACGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGCTGCCCAAGC-ATACAGCTGGCATCGGTGTGGACGGAC--------tttttttttttttttttttAATAGACCCACCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCGGCGGG---CAAGCGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGTAACACTTCGGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 518654 728 + 3907144 CTCAAAAATTTATGAAGA---AAGCAACTGAC----TTTTC-------GTTTATA-----ATTTACAA------TATCA-CCTCCAACATGCATGAGTCCTTAGA-GGAGAGGAATCTTATTTTTGCCTTGGTT---CATATTCAT---CATGAAAGATCCAACTTACAGATCACATACATACAACTTACTGTAAA--GAATAATCCTGGTTACTGAAACCTATTTTGTGATTTGCCATTTCAAGTTTCTTACAAAAACC--AA-----------TAGCGCGCCTGTGAGTGGTAGGAAGCTGGCAGCAGA--CTTGCAAAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGTTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGCTTATTGCTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCTCTTTGGTGGGTTGCCCGAGCAATACCGCTGGCATCGGTGTGGACGGAC------------TTTTTTTTTTTTTTTAATAGACCCGCCCGCCCCGAGGAGCCAGGGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CTAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTGCCTCAAGTT----CTTAGTGTCAGCTTATCGGGCC------------GAGAGGAG--GCTTCATAGGCAGCTGCTTTTTACTC---------AGTCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGTAACACTTCGGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21526563 724 - 44557958 CTCAAAAATTGCTAAAGA---AAGCAACTGAC----TTTTC-------GTTTACA-----GTTTACTC------TATCA-CCTCCAATATGCATGAGTCCTTAAA-GGAGAGGAATTTTATTTTTGCCTTACTT---CAAATTCAT---CATAAAAGATCCAACTTACAAATCACAT--ATATAACTTAATGTAAA--GAATAATCCTGGTTATTGAAAGTTATCTTGTGATTTACCATTTCAAGTTTCTTACAAAAGCCGTAATAGTCTTGAAGCAGCGCGCCTGTGAGTGGAAGGAAGCTGGCAGCAGACTCTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGATCCTCCACTGTT----AAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCAAGT-ATACCGCTGGCATCGGTGT---TGGAC--------------------TTTTTTTAATAGACCTGCCCGCCCCGAAGAGCCAGAGTTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCTAGTT----CTTAGTGTCAGCTTATCCGGCC------------GAGGGGGA--GCTTCATGGGAAGCTGCTTTTTGCCC---------AATCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGCCACACTTCGGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332056 735 + 6628207 CTCAAAAATTTCTAAAGA---AAGCAACTGAC----TTTTC-------GTTTACA-----ATTTACTC------TATCA-CCTCCAACATGCATGAGTCCTTAAA-GGCGAGGAATTTTATTTTTGCCTGACTT---CAAATTCAT---CATAAAAGATCCAATTTACAAATCACAT--ATATAACTTAATATAAA--GAATAATCCTGGTTATTGAAACTTATCTTGTGATTTACCATTTCAAGTCTCTTACAAAAACCCTAACAGTCTTGAAGCAGCACGCCTGTGAGTGGTAGGAAGCTGGCAGCAGACTCTTGC-AAAAGGGGC-ACAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGATCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCAAGT-ATACCGCTGGCATCGGTGT---TGGAC-------------TTTTTTTTTTTTTTAACAGACCTGCCCGCCCGGAGGAGCCAGAAGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCTAGTT----CTTAGTGTCAGCTTATCCGGCC------------GAGGGGGA--GCTTCATAGGCAGCTGCTTTTTGCCC---------AATCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGCCACACTTCGGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3314541 731 - 5917169 CTCAAAAATTTCTAAAGA---AAGCAACTGAC----TTTTC-------GTTTACA-----ATTTACTC------TATCA-CCTCCAACATGCATGAGTCCTTAAA-GGCGAGGAATTTTATTTTTGCCTTACTT---CAAATTCAT---CATAAAAGATCCAACTTACAAATCACAT--ATATAACTTAATGTAAA--GAATAATCCTGGTTATTGAAACTTATCTTGTGATTTACCATTTCAAGTTTCTTACAAAAACCCTAATAGTCTTGAAGCAGCAAGCCTGTGAGTGGTAGGAAGCTGGCAGCAGACTCTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGATCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATCGCTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGCTTTGGTGGTTTGCCCAAGT-ATACCGCTGGCATCGGTGT---TGGAC-----------------TTTTTTTTTTAATAGACCTGCCAGCCCGTAGGAGCCAGAGGTGAGTGAGT-TAAGCGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGAC----------------AGACCCA-CTCGAG--CTGTTCGCTCTCCCTCTAGTT----CTTAGTGTCAGCTTATCCCGCC------------GAGGGGGA--GCTTCATAGGCAGCTGCTTTTTGCCC---------AATCTCAGCCGAGTCTCCC----TTAGGGGCTGC-AAGCCACACTTCGGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9275312 727 - 10531588 CTCAAAAATTTCTAAAGA---AAGCAACTGAC----TTTT-------------CA-----ATTTACTC------TATCA-CCTCCAACATGCATGAGTCCTTAAA-GGAGAGGAATTTTATTTTTGCCGTACTT---CAAATTCAT---CATAAAAGATCCAACTTACAAATCACAT--ATATAACTTAATGTAAA--GAATAATCCTGGTTATTGAAACTTATCTTGTGATTTACCATTTCAAGTTTCTTACAAAAACCCTAATACTCTTGAAGCAGCGCGCTTGTGAGTGGTAGGAAACTGGCAGCAGACTCTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGATCCTCCACTGTTAAACAAGGTTCATTAACCACACAGACTTGCTGTTTCAGCTTTCTGGCTTCAATGAAGTGCTATGATCTCCTTTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATGAATTAACCAGCGCTTTGGTGGTTTGCCCAAGT-ATACCGCTGGCATCGGTGT---TGGAT---------------TTTTTTTTTTTTAATAGACCTGCCCGCCCCGAGGAGCCAGAGGTGAGTGAGT-TAAGTGCCAACCCGGCACTTCTCAGCGGG---CAAACGGAGGC----------------AGACCCA-CTCGAG--CCGTTCGCTCTCCCTCTAGTT----CTTAGTGTCAGCTCATCTGGCC------------GAGGGGGA--GCTTCATAGGCAGCTGCTTTTTGCCC---------AATCTCAGCCGAGTCTTCC----TTAGGGGCTGC-AAGCCACACTTCGGC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54926695 755 + 72247402 CTCAAAAATTTCTAAAGA---AAGCAACTGACAATTGCTTC-------ATTTACAATTTCATTTACCATACTC-TGTCG-CCTCCAACATGCATGAGTCCTTAGA-GGAGA-----TTTAATGCTGTCTTAGCTTCATAAATTCGT---CATAAAAGATCCCATTTACAGATTACATACATAT---TTAAGGTAAA--GAATAATCCTGGCCATTCAGACCCATCTTGTAATTTACCACTTCAAGTTTCTTATAAAAAGCCTAATAGTCTTCAAACAGCACGCCTGTAAGCGGTAGGAAGCTGGCACCAGTCTTTTGC-AAAAGGGGC-GAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCA--GTGAAACAAGGCTCATTAACCACACAAACTTGCTGCTTCAGCTATCTGGCTTCCACGAAGTGCTATGATCTCCTTTGGTTACTCTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGCGTTTTGGTGGTTTGCCCAAGC-ACACCGCTGGCATCGGTGTGGATGGA------------TTTTTTTTTTTTTTTTAATAGATCCGCCCGCCCCGGGGAGCCAGAGGTGAGCGAAGAAAAGCGCCAACCGGGCACTTCTCAGCAGG---CAAACGGAGAC----------------CTACGGAGCTCGAG--CCGTTCGGTCTCCGTCTAGTT----CTTAGTGTCAGCTTATGGTGCA-----------GAAGGGGGG--GCTTCCTACGCGGCTGCTTTTTGCTA---------AATCTCAGCCGAGTCTTCCTTAGTTAGGGGCTGC-AAGCCACACTTCGGA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2936307 755 + 9850184 CTCAAAAATTTCTAAAGA---AAGCAACTGACAATTGCTTCATTTACAATTTACAATTTCATTTACCATACTC-TGTCG-CCTCCCACATGCATGAGTCCTTAGA-GGAGA-----TTTAATGTTGCCTTAGTCTCATAAATTCAT---CATAAAAGATTCAATTTACACAT----TACATAT---TTAAGGTAAA--GAATAATCCTGGCTATTCAAACCCATCTTGTAATTTACCACTTCAAGTTTCTTATAAAAAGCCTAATAGTCTTGAAACAGCACGCCTGTGAGCGGTGGGAAGCTGGCACCAGTCTTTTGC-AAAAGGGGC-GAAACTCTAGTTGGCAGT-AAATGTTCAAACACGTGAGCCTCCA--GTGAAACGAGGCTCATTAACCACACAAACTTGCTGCTTCAGCTTTCTGGCTTCCATGAAGTGCTACGATCTCCTTTGGTTACTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACTAGCGTTTTGGTGGTTTGCCCAAGC-ACACCGCTGGCATCGGTGTGGATGGAt----------tttttttttttttttttAATAGACCCGCCCGCCCCGGGGAGCCAGAGGTGAGTGAAG-AAAGCGCCAACCCGGCACTTCTCTGCAGG---CAAAAGGAGAC----------------CTACGGAGCTCGAG--CCGTTCGGTCTCCGTCTAGTT----CTTAGTGCCAGCTTATCGTGCA-----------GAAGGGGGG--GCTTCACACGCGGCTGCTTTTTGCTA---------AATCTCAGCCGAGTCTTCC----TTAGGGGCTGC-GAGCCACACTTCGGT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13699580 751 + 13852661 CCAAAAAAACTCTAAAAAACGAAGCAACTGACAATTGCTTC-------ATTTAC-ACTTCATCTACAATACTCTTATCA-CCTCCAACATACATGACTCCTTA----GAGA-----TTTCATGTTACCTTAGTTTCATAAATGCAT---TATAAAAGATCCAGTTTACAAATTACATACATAC---TTAAGGTAAA--GAATAATCCTGGCTATTGGAACCCATCTTGTAATTTACCACTTCAAGTTTCTTATAAAAAGCCTAATAGTCTTGAAACAGCACGTCTATAAGTGGTA-GAAACTGGCACCCATCTCTTGC-AAAAGGGGC-AAAACTCTAGTTGGCAGT-AAATGTTGAAGCACGTGAGTCTCCT--GTGAAACAAGCCTCATTAACCACACAAACTTGCTGCTTCAGCTTTCTGGCTTCAATGAAGGGCTATGATCT--TTTAGTTACTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGAGTTTTGGTGGTGTGCCCAAGC-ATACCGCTGGCATCGGTGTGGATGGA---------------TTTTTTTTTTTTTAACAGACCCGCCAGCCCCGGGGACCCAGAGGTGACTGAAG-AAAGCGCCAACCCGGCACTTCGCATCGGA---CAAACGGAGAC----------------CTAGGGAACTCGAG--CCGT----TGTCCCTCCAGTT----CTTAGTGTCAGCTTATCCAGCAGAAGGGGGCGGGAAGGGGGG--GCTTCAGACGCGGCTGCTTTTGGCTA---------AATCTCAGCAGACTCTTCC----TTAGGAGCTGC-AAGCCACACTTCGGC i otoGar3.GL873566 I 332 C 0 s mm10.chr8 22463970 733 - 129401213 TGCAATTATTTCTAAAGC---AAGCAACTGGC----TTCTC-------ACTTACA-----ATATTC--------CATCA-CCTTCAACATGTATGAGTCTTTGGA-GATGAGA---TTTAATTCTGCCTCAGTT----ACATCGATACGCGTGAAACGCTGCACACA-AGATCGCATCTACAC---TTAAGGTAAA------------GGCTATTCACACATATGTGATGGTAC-CCGTTTCAGGATTCTTATAAAATGTCTACTGGTCTTGCGGCAGCACGCCTGCCAGCGATAGGAAGCTGGCACCGGGCTCTTGC-AAAAGGGGC-GAAACTCTAGTTGGCAGTAAAATGCTCAAACACGTGAGCCTCCACTGTTAAACAAGGCTCATTAACCTCACAAACTTGCTGTATCAGCTCTCTGCCTTCCACAAAGTGCTGTGATCTTCTCTGGTTATTGTTGA---GAGCCAATGATGGGTTAAATTCCCATAAATTAACCAGTGCTTTGGTGGTTTGCCCAAGC-AAACTGCTGGCATCGGTGTGGATGGAT-------------------------TTAATAGACCGGCCCGCCC-GGGGAGCCCGAGGTGACTAAAG-AAAGCGTCCAACCAACGCTTCCCAACAGGGAAAAAAAGGAGAC----------------TAAAGAA-CTCGAG--CCGATCGCTCTCCCGGTAGTTAGTGCTTAGTGTCAGCTTATCGTGCA------AGACTTAGGGGTGA--GCTTCGCACGCGGCTGCTGCTCCCCCCACCCCCTAAATCTCAGCTGAGTCTCGC----TAAGGGGCGGTAAAGTAACACTTCGGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80460004 749 + 88915250 CTCACAAATCTCTGAAGT---AAGCAACTGGC----TTTTC-------CGATCAC-----ACTTAAAATACTC-GGTCA-CCTCCAACAAGCGCGAGCACTTTCACGGAAATGAGATTTACTCTTGCCTTCCAT----AAATTCAT---CACAACAGATCCAGGTTACGGATCACGTACGTAC---TTAAAGTAAA--AAATAATAGTGGCTGTTCAAACATATCTTGAGATGTACCATTTCAGGCTTCATTTAAA----------GCCTTGCAGCAGCAAGTCTCTGGAGGGTAGGAAGCTGGCACTAGTCTCTTGC-AAAAGGGGCAAAAACTCTCGCTGGCAGT-AAATGTTCAAACACGTGAGCCTCGACTGTTAAACAAGGCTCATTAGCCACCGAAACTTGCTGTTTCAGCTCTCTG-CTTCGACCAAGTGCTATGATCTCTTTTGGTTACTGTCGAGCGGGGCCAATGATGGGTTAAATCCCTATAAATTAACCAGCAGTTTGAT---TTGCCCAAGC-TCACCCCTGGCGTCGGTGGGGGTGGGTTGttttttttttttgtttttttttttAAACAGACCCCGTCGCGGGGGAGAGCCAGCTGTGAGCAG---AAGGCGCCACCCCGGCACCTCTCGGGAGG---CACACGGAGCCCTCCGCGGCCCCGGcgagccccc-tccgagccccctccgggccccctccgGTC----CTTAGTGTCAGCTTATCCTGCA------------GAGGCGGG--GCTTCAAGCGCCGGGGCTTTGTACTA---------AATCTCAACCGAGTCCCGC----CTGGGGACTGC-AAG------------ i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 920785 690 + 1009443 TGCAAAAATTTCTGAAGG---AAGCACTTGGG----TTTTC-------AGATGAC-----ATTTACAATACTCTTATTAGCCCTTAACATGCATTAGTCCTTAGA-GGAGATGATAATTAACATTGCC-TATTTCCCTAAATGCAT---CATAAAAAATGCAGGTTACAGATCACATATACAC---CTAAGGTAAAAAGAACAATCC------------CATAGCTTGTGATTTACCATTTCAAGTGTCTTAGGAAAAGCTTAATAGTCTTGAAGCAGCACGCCGGCGAAGGGTTGGAACCTGGCACCGGTCTCTGGC-AAAAGGGGC-AAAAATCTCCTTGGCTGT-AAATGTTCAAATACGTGAGCCTCCACTGTTAAACACGGCTCATTAACCACACAAACTTGCTGTTTCAGCTTTCTGGCCTCAACGAAGTGCTATGATCTCCTTCGGTTATTGTGGA---GAGCCAGTGATGGGTTAAATTCCCATAAATTAACCGGCGTTTTGGTGGTTTGCCCAAGC-ATACTGCTGGCATCAGTGAGGACGGat--------ttttttttttttttttttaaaCAGACTCGCCCGCCCCAGGGAGCCAGAGGTGAATGAAG-AAAGCGCCAACCCGGCGCTCCTCTGCAAA---C---------T----------------A-------ATCGGG--CCG--------------AGGG--------------------------------------GAGGGGGGCCGCTTCATGCGCGGCTGCTTAGGACTA---------GATCTCGACCAGCTCT--C----TTGGGGACTGC-AAGCCACGCTTCGGC i dasNov3.JH569970 C 0 M 653 a score=1950546.000000 s hg38.chr16_GL383557v1_alt 41903 138 + 89672 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGAGAGA---------------------------------GACGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTCCCGCGAGCCCA s panTro5.chr16 21468189 138 - 81586097 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGAGAGA---------------------------------GACGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTcccgcgagccca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534815 138 - 90481686 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGAGAGA---------------------------------GACGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTcccgcgagccca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 767854 148 + 3010529 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCAGGTTTGGAGAGAGACGGAGAGA---------------------------------GACGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTcccgcgagccca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878787 137 + 163208435 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAACCTCCAGAAACCCGAGTTT----------GGGGAGA---------------------------------GA-GGGGAGAGAACCGGCTTG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTCCCGCGAGCCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352071 139 - 74971481 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGGGAGA---------------------------------GAGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGCAAGGAACAAAGTGAGCTcccgcgagccca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21062214 139 - 78541002 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGGGAGA---------------------------------GAGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGCAAGGAACAAAGTGAGCTcccgcgagccca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14458545 139 + 26466322 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGGGAGA---------------------------------GAGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGCAAGGAACAAAGTGAGCTcccgcgagccca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20781603 138 + 43916225 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGTTTT----------GGGGTGA---------------------------------GAGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTcccgcgagccca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58219486 138 + 75399963 GGCTGCCCAACTT--TTCC-TGCAAGAAGCGTCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------TGGGAGA---------------------------------GAGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTcccgcgagccca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6767076 138 - 7209941 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGATTT----------GGGGTGA---------------------------------GAGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTCCCGCGAGCCCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 519382 138 + 3907144 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTG-AAAGCTCCAGAAACCCGGGTTT----------GGGGAGA---------------------------------GCGGGGGAGAGAACCGGCTCG-CCCCGCC---------GGCG-----G---GGC-AGGAACAAAGTGAGCTCCCGCGAGCCCA i colAng1.NW_012123265v1 C 0 M 465 s calJac3.chr20 21527287 138 - 44557958 GGCTGCCCCACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTC-TAAGTTCCAGAAACCCGGGTTT----------GGGAAGA---------------------------------GACGGGGAGAGAACCGGCTCG-CCCCGTC---------GGCA-----G---GGA-AGGAACAAAGTGAGCTCCCGCGAGCCCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332791 129 + 6628207 GGCTGCCCAACTT--TTTC-TGCAAGAAGCATCCGTTTTTCCACACTC-AAAGCTCCAGAAACCCGGGTTT-----------------------------------------------------GGGGAGAGAACCGGCTCGCCCCCGCC---------GGCA-----G---CGC-AGGAACAAAGTGAGCTCCCGCGAGCCCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3315272 137 - 5917169 GGCTGCCCAACTT--TTTC-TGCAAGAAGCATCCGTTTTTCCACACTC-AAAGCTCCAGAAACCCCGGTTT----------GGGAGGA---------------------------------GACGGGGAGAGAACCGGCTCA--CCCGCC---------GGCA-----G---GGC-AGGAACAAAGTGAGCTCCCGCGAGCCCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276039 137 - 10531588 GGCTGCCCAACTT--TTCC-TGCAAGAAGCATCCGTTTTTCCACACTC-AAAGCTCCAGAAACCCGGGTTT----------GGGAAGA---------------------------------GAC-GGGAGAGAATCGGCTCG-CCCCGCC---------GGCA-----G---AGC-AGGAACAAAGTGAGCTCCCACGAGCCCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927450 143 + 72247402 GGCTGCCCAACTT--TTCC-TGCAAGGAACATCAGTTCTTCCACACTC-AAAGCCCCAGAAGCCGGAGTTT----------GGGGAGA---------------------------------GAGGCGGAGGAAAGGGGCTCG-CCCCGCGAAGG----GGCCG-----G---GGC-AGGAACAAAGTGAGCGCCGGCGAGCCCA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937062 146 + 9850184 GGCTGCCCAACTT--TTCC-TGCAAGGAACATCAGTTTTTCCGTACTC-AAAACCCCAGAAAACGGAGTTT----------GGGGAGA---------------------------------GAGGAGGAGGAAAGGGGCTCG-CCCCGCAAAGG----GAGCA-----GGGTGGC-AGAAACAAAGTGAGcgccggcgagccca i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700331 133 + 13852661 GGCTGCCCAACTT--TTCC-TGCAAGGAACATCACTTTTTCCATACTC-AACGCCCCAGAAAACTGAGTTT----------GGGGAG------------------------------------GGAGGAGGAAACAGGCTCG-CCCCGCAAAGG----GGGCA-----GGGTGGC-AGAAACAAAGTGCGCGCC---------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22464703 150 - 129401213 GGCTGCCCAACTTTCTTCT-CGCTGGACGCCTCAGTTTTTCCACACTCTGGAGCCCCACAAGAGGAGGTCT----------GGTGGCC---------------------------------GGGGCGGAGGGAACCGGCGAG-CCCCGCACAGGCGTCAGGGT-----G---GGC-AGAAACAAAGTGCGCGCAGGCGAGCCCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80460753 166 + 88915250 ------CCAACTT--TTCCTTGCAAGGAGCATCAGCTTTTCCACACGC-AAAGCCCCAGGAAGCGGGGTCC----------GGGGGGAGCCGGGGAACGGCGCGGGGAAGCGGAGGACGCGGAGGGGGAGGGAACGGGCTCC-CCGCGAA---------GGGGCCGGAG---GGC-AGGGACCGAGTGCGCGCC-----Gcccg i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 921475 653 + 1009443 M a score=6002.000000 s hg38.chr16_GL383557v1_alt 42041 1 + 89672 -G s panTro5.chr16 21468327 1 - 81586097 -g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534953 1 - 90481686 -g i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768002 1 + 3010529 -g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878924 1 + 163208435 -G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352210 1 - 74971481 -g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21062353 1 - 78541002 -g i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14458684 1 + 26466322 -g i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20781741 1 + 43916225 -g i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58219624 1 + 75399963 -g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6767214 1 - 7209941 -G i manLeu1.NW_012101698v1 C 0 M 715 s calJac3.chr20 21527425 1 - 44557958 -A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332920 1 + 6628207 -G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3315409 1 - 5917169 -g i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276176 1 - 10531588 -g i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927593 1 + 72247402 -G i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937208 1 + 9850184 -g i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700464 1 + 13852661 -G i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22464853 1 - 129401213 -G i mm10.chr8 C 0 C 0 s canFam3.chr5 80460919 1 + 88915250 c- i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 921475 653 + 1009443 M e colAng1.NW_012123265v1 519520 465 + 3907144 M a score=176996.000000 s hg38.chr16_GL383557v1_alt 42042 17 + 89672 GCCGCCGCGGCCTGCCC s panTro5.chr16 21468328 17 - 81586097 gccgccgcggcccgccc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534954 17 - 90481686 gccgccgcggcccgccc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768003 17 + 3010529 gccgccgcggcccgccc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878925 17 + 163208435 GCCGCCGCGGCCCGCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352211 17 - 74971481 gccgccgcggcccgccc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21062354 17 - 78541002 gccgccgcggcccgccc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14458685 17 + 26466322 gccgccgcggcccgccc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20781742 17 + 43916225 gccgccgcggcccgccc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58219625 17 + 75399963 gccgccgcggcccgccc i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527426 17 - 44557958 gccgccgcggcccgccc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6332921 17 + 6628207 GCCGCCGCGGCCCGCCC i saiBol1.JH378225 C 0 M 477 s cebCap1.NW_016107433v1 3315410 17 - 5917169 gccgccgcggcccgccc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276177 17 - 10531588 gccgccgcggcccgccc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927594 7 + 72247402 ----------GCCACCC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937209 7 + 9850184 ----------gccaccc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700465 7 + 13852661 ----------TCCGCCC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22464854 15 - 129401213 GCCGCCAC--CCCGCCG i mm10.chr8 C 0 C 0 s canFam3.chr5 80460920 17 + 88915250 cccgccccgccccgcgc i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 921475 653 + 1009443 M e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M a score=3199998.000000 s hg38.chr16_GL383557v1_alt 42059 231 + 89672 ACCCTCCCGC--------CCGGCCCCGCTCACCCTCC--------------------------------------------AGCAGCACCTCCTTGCCCGCGCGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCAGCCAGCCCGGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC s panTro5.chr16 21468345 275 - 81586097 accctcccgc--------ccggccccgctcaccctcccgcccggccccgctcaccctcccgcccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCAGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21534971 253 - 90481686 accctcccgc--------ccggccccgctcaccctcc----------------------cgcccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCAGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i panPan2.chr16 C 0 M 20 s gorGor5.CYUI01000018v1 768020 275 + 3010529 accctcccgc--------ccggccccgctcaccctcccgcccggccccgctcaccctcccgcccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCAGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53878942 253 + 163208435 ACCCGCCCGC--------CCGGCCCCGCTCACCCGCC----------------------CGCCCGGCCCCGCTCACCCTCCAGCAGCACCTCCTTGCCCGCACGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCAGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352228 239 - 74971481 accctcccgc--------ccg--------------cc----------------------cggccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAACGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCATTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21062371 239 - 78541002 accctcccgc--------ccg--------------cc----------------------cggccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAACGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCATTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14458702 239 + 26466322 accctcccgc--------ccg--------------cc----------------------cggccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAACGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCATTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20781759 239 + 43916225 accctcccgc--------ccg--------------cc----------------------cggccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAACGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCATTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58219642 239 + 75399963 accctcccgc--------ccg--------------cc----------------------cggccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAACGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCATTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527443 239 - 44557958 accctcccgc--------ccc--------------gt----------------------cggccggccccACTCACCCTCCAGCAGCACCTCCTTGCCCGCGCGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3315427 239 - 5917169 accctcccgc--------ccg--------------gc----------------------cggccggccCCACTCACCCTCCAGCAGCACCTCCTTGCCCGCGCGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGACCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276194 247 - 10531588 accctcccgcccggccggccg--------------gc----------------------cggccggccCCACTCACCCTCCAGCAGCACCTCCTTGCCCGCACGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927601 229 + 72247402 --------G---------CCG--------------CC----------------------CG-CCGGCCCCGCTCACCCTCCAGCAGCACCTCCTTGCCCGCGCGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937216 231 + 9850184 --------gc--------ccg--------------cc----------------------cgtccggccccgctcaccctccagcagcacctccttgcccgcgcgcTTCAGTGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACGGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCGGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700472 230 + 13852661 --------GC--------CCG--------------CC----------------------CG-CCGTCCCCGCTCACCCTCCAGCAGCACCTCCTTGCCCGCGCGTTTCAGCGCCTGCACGGCCTGGTCATGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGAGCCCGGCTCTGGTCGGCCGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22464869 230 - 129401213 --CCTCCCGC--------TCG--------------GC-----------------------------CCCCGCTCACCCTCCAGCAGCACCTCCTTGCCCGCGCGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCCGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80460937 227 + 88915250 -------------------cg--------------cc----------------------cG-CCGGCCCCGCTCACCCTCCAGCAGCACCTCCTTGCCCGCGCGCTTCAGCGCCTGCACGGCCTGGTCGTGGGTGGCCTGGCGCAGGTCGGTGCCGTTCACCGACAGGATGGCGTCGCCCAGCCGCAGCGCCCGGCTCTGGTCGGCCGCCAGCCCCGGGAAGATCTTGGAGATGAGGATCGGCATCCGGTTCTCGCGGCCGCCCTTGATGCTGATGCCCAGGC i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 921475 653 + 1009443 M e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M e saiBol1.JH378225 6332938 477 + 6628207 M a score=1380312.000000 s hg38.chr16_GL383557v1_alt 42290 117 + 89672 CGCCCGCCTCTTGCTTCACCACCCGCACCCGGCGCACGGGCGGCGACGCGCCCGCCTCACCCGCGGGGCCCCGAGGCGGCGCCGGCGGGCTCGGGGGCCCCAGGCCGCGGCTTGGGC s panTro5.chr16 21468620 117 - 81586097 CGCCCGCCTCTTGCTTCACCACCCGCACCCGGCGCACGGGCGGCGACGCGCCCGCCTCACCCGCGGGGCCCCGAGGCGGCGCCGGCGGGCTCGGGGGCCCCAGGCCGCGGCTTGGGC i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768295 117 + 3010529 CGCCCGCCTCTTGCTTCACCACCCGCACCCGGCGCACGGGCGGCGACGCGCCCGCCTCACCCGCGGGGCCCCGAGGCGGCGCCGGCGGGCTCGGGGGCCCCAGGCCGCGGCTCGGGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879195 117 + 163208435 CGCCCGCCTCCTGCTTCACTACCCGCACCCGGCGCACGGGCGGCGACGCGCCCGCCTCACCCGCGGGGCCCCGAGGCGGCGCCGGCGGGCTCGGGGGCCCCAGGCCGCGGCTCGGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352467 117 - 74971481 CGCCCGCCTCCTGCTTCACCACCCGCACCCGGCGCACGGGAGGCGACGCGCCCGCCTCACCCGCGGGGCTCCGAAGTGGCGCCGGCGGGCTTGGGGGCCCCAGGCCGCGGCTTGGGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21062610 117 - 78541002 CGCCCGCCTCCTGCTTCACCACCCGCACCCGGCGCACGGGAGGCGACGCGCCCGCCTCACCCGCGGGGCTCCGAAGTGGCGCCGGCGGGCTTGGGGGCCCCAGGCCGCGGCTTGGGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14458941 117 + 26466322 CGCCCGCCTCCTGCTTCACCACCCGCACCCGGCGCACGGGAGGCGACGCGCCCGCCTCACCCGCGGGGCTCCGAAGTGGCGCCGGCGGGCTTGGGGGCCCCAGGCCGCGGCTTGGGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20781998 117 + 43916225 CGCCCGCCTCCTGCTTCACCACCCGCACCCGGCGCACGGGAGGCGACGCGCCCGCCTCACCCGCGGGGCTCCGAAGTGGCGCCGGCGGGCTTGGGGGCCCCAGGCCGCGGCTTGGGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58219881 117 + 75399963 CGCCCGCCTCCTGCTTCACCACCCGCACCCGGCGCACGGGAGGCGACGCGCCCGCCTCACCCGCGGGGCTCCGAAGTGGCGCCGGCGGGCTTGGGGGCCCCAGGCCGCGGCTTGGGC i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527682 117 - 44557958 CGCCCGCCTCTTGCTTCACCACCCGCACACGGCGCAcgggcggcgacgcgcccgcctcacccgcggggccccgaggcggcgccggtgggctcgggggccccaggccgcggcTCGGGC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3315666 117 - 5917169 CGCCCGCCTCTTGCTTCACCACCCGCACACGGCGCACGGGCGGCGACGCGCCCGCCTCACCCGCGGGGCCCCGAGGCGGCGCCGGTGGGCTCGGGGGCCCCAGGCCGCGGCTCGGGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276441 117 - 10531588 CGCCCGCCTCTTGTTTCACCACCCGCACACGGCGCACGGGCGGCGACGCGCCCGCCTCACCCGCGGGGCCCCGAGGCGGCGCCGGTGGGCTCGGGGGCCCCAGGCCGCGGCTCGGGC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927830 117 + 72247402 CGCCCGCCTCCTGCTTCACCACTCGGACCCGGCGCACGGGCGGCGACGCGCCCGCCTCGCCGGCGGAGCCCCGCGGCGGCGCCGGCGGGCTCGGGGGCCCCAGGCCGCGGCTCGGGC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937447 117 + 9850184 CGCCCGCCTCCTGTTTCACCACTCGGACCCGGCGCACGGGCGGCGACGCGCCCGCCTCGCTTGCGGAGCCCCGCGGCGGCGCGGGCGGACTCGGGGGCCCCAGGCCGCGGCTCGGGC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700702 117 + 13852661 CGCCCGCCTCCTGCTTCACCACCCGGACCCGGCGTACGGGCGGCGACGCGCCCGCCTCGCTCGCAGAAccccgcggcggcgccggcgggctcgggggccccaggccgcggctcgggc i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465099 117 - 129401213 CGCCCGCCTCTTGCTTCACCACTCGCACTCGGCGCACGGGCGGCGAGGCGCTCGCTTcccccgcgggaccgcggggcggcgcgggagggctgggcggccccAGGCCACGGTTCGGGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80461164 117 + 88915250 CGCCCGCCTCCTGCTTCACTACCCGCAcccggcgcacgggcggcgacgcgcccgcctcgcccgccgggccccgcggaggcgcgggcgggctcgggggccccaggccgcggctggggc i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 921475 653 + 1009443 M e panPan2.chr16 21535224 20 - 90481686 M e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M e saiBol1.JH378225 6332938 477 + 6628207 M a score=257698.000000 s hg38.chr16_GL383557v1_alt 42407 20 + 89672 TCCCGGGCAGCGAGTCGCCC s panTro5.chr16 21468737 20 - 81586097 TCCCGGGCAGCGAGTCGCCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535244 20 - 90481686 TCCCGGGCAGCGAGTCGCCC i panPan2.chr16 M 20 C 0 s gorGor5.CYUI01000018v1 768412 20 + 3010529 TCCCGGGCAGCGAGTCGCCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879312 20 + 163208435 TCCCGGGCAGCGAGTCGCCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352584 20 - 74971481 TCCCGGGCAGCGAGTCGCCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21062727 20 - 78541002 TCCCGGGCAGCGAGTCGCCC i macFas5.chr20 C 0 M 1891 s macNem1.NW_012011355v1 14459058 20 + 26466322 TCCCGGGCAGCGAGTCGCCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782115 20 + 43916225 TCCCGGGCAGCGAGTCGCCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58219998 20 + 75399963 TCCCGGGCAACGAGTCGCCC i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527799 20 - 44557958 TCCCAGGCAGCGAGTCGCCG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3315783 20 - 5917169 TCCCGGGCAGCGAGTCGACG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276558 20 - 10531588 TCCCGGGCAGCGAGTCGCCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927947 20 + 72247402 TCCCGGGCAGCGAGTCGCCG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937564 20 + 9850184 TCCCGGGCAGCGAGTCGCCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700819 20 + 13852661 tcccgggcagcgagtcgccg i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465216 18 - 129401213 TCCCGGGCAGAGACTCGC-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80461281 20 + 88915250 tcccgggcagcgagtcgccg i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 921475 653 + 1009443 M e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M e saiBol1.JH378225 6332938 477 + 6628207 M a score=12000.000000 s hg38.chr16_GL383557v1_alt 42427 1 + 89672 G s panTro5.chr16 21468757 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535264 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768432 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879332 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352604 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459078 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782135 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220018 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527819 1 - 44557958 G i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3315803 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276578 1 - 10531588 G i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927967 1 + 72247402 G i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937584 1 + 9850184 G i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700839 1 + 13852661 g i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80461301 1 + 88915250 g i canFam3.chr5 C 0 C 0 e mm10.chr8 22465234 0 - 129401213 C e dasNov3.JH569970 921475 653 + 1009443 M e macFas5.chr20 21062747 1891 - 78541002 M e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M e saiBol1.JH378225 6332938 477 + 6628207 M a score=200906.000000 s hg38.chr16_GL383557v1_alt 42428 14 + 89672 CGCCGCCGCCGTTT s panTro5.chr16 21468758 14 - 81586097 CGCCGCCGCCGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535265 14 - 90481686 CGCCGCCGCCGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768433 14 + 3010529 CGCCGCCGCCGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879333 14 + 163208435 CGCCGCCGCCGTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352605 14 - 74971481 CGCCGCCGCCGTTC i rheMac8.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459079 14 + 26466322 CGCCGCCGCCGTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782136 14 + 43916225 CGCCGCCGCCGTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220019 14 + 75399963 CGCCGCCGCCGTTC i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527820 14 - 44557958 CGCCGCCGCCGTTC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3315804 14 - 5917169 CGCCGCCGCCGTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276579 14 - 10531588 CGCCGCCGCCGTTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927968 14 + 72247402 CGCCGCCGCCGTTC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937585 14 + 9850184 CGCCGCCGCCGTTC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700840 14 + 13852661 cgccgccgccgTTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465234 14 - 129401213 CGCCGCCGCCGTTC i mm10.chr8 C 0 C 0 s canFam3.chr5 80461302 14 + 88915250 cgccgccgccgTTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922131 14 + 1009443 CGCCGCCGCCGTTC i dasNov3.JH569970 M 653 C 0 e macFas5.chr20 21062747 1891 - 78541002 M e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M e saiBol1.JH378225 6332938 477 + 6628207 M a score=256726.000000 s hg38.chr16_GL383557v1_alt 42442 16 + 89672 GGGAGGCCGTTGAAGG s panTro5.chr16 21468772 16 - 81586097 GGGAGGCCGTTGAAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535279 16 - 90481686 GGGAGGCCGTTGAAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768447 16 + 3010529 GGGAGGCCGTTGAAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879347 16 + 163208435 GGGAGGCCGTTGAAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352619 16 - 74971481 GGGAGGCCGTTGAAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21064639 16 - 78541002 GGGAGGCCGTTGAAGG i macFas5.chr20 M 1891 C 0 s macNem1.NW_012011355v1 14459093 16 + 26466322 GGGAGGCCGTTGAAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782150 16 + 43916225 GGGAGGCCGTTGAAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220033 16 + 75399963 GGGAGGCCGTTGAAGG i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527834 16 - 44557958 GGAAGGCCGTTGAAGG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3315818 16 - 5917169 GGGAGGCCGTTGAAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276593 16 - 10531588 GGGAGGCCGTTGAAGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927982 16 + 72247402 GGGAGGCCGTTGAAGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937599 16 + 9850184 GGGAGGCCGTTGAAGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700854 16 + 13852661 GGGAGGCCGTTGAAGG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465248 16 - 129401213 GGAAGACCGTTGAAGG i mm10.chr8 C 0 C 0 s canFam3.chr5 80461316 16 + 88915250 GGGAGGCCGTTGAAgg i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922145 16 + 1009443 GGGAGGCCGTTAAAGG i dasNov3.JH569970 C 0 C 0 e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M e saiBol1.JH378225 6332938 477 + 6628207 M a score=426538.000000 s hg38.chr16_GL383557v1_alt 42458 32 + 89672 CGGCGGCCGCGGGTCCCAGAGCGGGCTCCAGC s panTro5.chr16 21468788 32 - 81586097 CGGCGGCCGCGGGTCCCAGAGCGGGCTCCAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535295 32 - 90481686 CGGCGGCCGCGGGTCCCAGAGCGGGCTCCAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768463 32 + 3010529 CGGCGGCCGTGGGTCCCAGAGCGGGCTCCAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879363 32 + 163208435 CGGCGGCCGCGGGTCCCAGAGCGGGCTCCAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352635 32 - 74971481 CGGCTGCCGCGGGTCCCAGAGCGGGCTCCAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21064655 32 - 78541002 CGGCTGCCGCGGGTCCCAGAGCGGGCTCCAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459109 32 + 26466322 CGGCTGCCGCGGGTCCCAGAGCGGGCTCCAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782166 32 + 43916225 CGGCTGCCGCGGGTCCCAGAGCGGGCTCCAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220049 32 + 75399963 CGGCTGCCGCGGGTCCCAGAGCGGGCTCCAGC i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21527850 32 - 44557958 CGGCCGCCGCGGGTCCCAGAGCGGGCTCCAGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333415 32 + 6628207 CGGCCGCCGCGGGTCCCAGAGCGGGTTCCAGC i saiBol1.JH378225 M 477 C 0 s cebCap1.NW_016107433v1 3315834 32 - 5917169 CGGCCGCCGCGGGTCCCAGAGCGGGTTCCAGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276609 32 - 10531588 CGGCCGCCCCGGGTCCCAGAGCGGGCTCCAGC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54927998 32 + 72247402 CGCCCGCCGCCGGCCCCAGAGTGGGCTCCGGC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937615 32 + 9850184 CGCCCGCCGCCGGCCCCAGAGTGGGCTCAGGC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700870 32 + 13852661 CGCCCGCAGCCGGCCCCAGAGAGGGCTCGGGC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465264 20 - 129401213 ---CGGCCGCCGGC---------GGCTCAGGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80461332 32 + 88915250 cggccgccgccggccccagggccgcctcgggc i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922161 32 + 1009443 CGGCCGCCGCCGGCCCCAAAATCGGCTCGGGC i dasNov3.JH569970 C 0 C 0 e colAng1.NW_012123265v1 519520 465 + 3907144 M e manLeu1.NW_012101698v1 6767215 715 - 7209941 M a score=2721555.000000 s hg38.chr16_GL383557v1_alt 42490 157 + 89672 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG------CCGCAGTCG s panTro5.chr16 21468820 157 - 81586097 TCGGCCGCGGAGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG------CCGCAGTCG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535327 157 - 90481686 TCGGCCGCGGAGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG------CCGCAGTCG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768495 157 + 3010529 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGGAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCAG------CCGCAGTCG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879395 157 + 163208435 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG------CCGCAGTCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352667 148 - 74971481 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG--------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21064687 148 - 78541002 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG--------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459141 148 + 26466322 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG--------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782198 148 + 43916225 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG--------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220081 148 + 75399963 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTCAGCTCGGCCACCACTCGGACCCAGCGCTCCCTCAGAAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG--------------- i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 519985 154 + 3907144 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGTTCAGTTCGGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCGCCGAAG--------- i colAng1.NW_012123265v1 M 465 C 0 s calJac3.chr20 21527882 157 - 44557958 TCGGCCGCGGCGCCGTCGCCAGTCAGGCTCAGGCTCTCCCCGCTCAGTTCCGCCACCACTCGGACCCAGCGCTCCCTCAGGAGTAGCTCCACCAGCCCAGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCTCTCCAGCCG------CCGCAGTCG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333447 118 + 6628207 TCGGCCGCGGCGCCGTCGCCAGTCAGGCTCAGGCTCTCCCCGCTCAGCTCCGCCACCACTCGGACCCAGCGCTCCCTCAGGAGTAGCTCCACCAGCCCAGCTTTAGTG---------------------------------------G------CCGCAGTCG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3315866 157 - 5917169 TCGGCCGCGGCGCCGTCGCCAGTCAGGCTCAGGCTCTCCCCGCTCAGCTCCGCCACCACTCGGACCCAGCGCTCCCTCAGGAGTAGCTCCACCAGCCCAGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG------CCGCAGTCG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276641 157 - 10531588 TCGGCCGCAGCGCCGTCGCCAGTCAGGCTCAGGCTCTCCCCGCTCAGCTCCGCCACCACTCGGACCCAGCGCTCCCTCAGGAGTAGCTCCACCAGCCCAGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCAGCCG------CCGCAGTCG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54928030 157 + 72247402 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTGAGCTCGGCCACCACCCGGACCCAGCGCTCCCTCAGCAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCCGCCG------CCGCCGTCG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2937647 157 + 9850184 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCCCCGCTGAGCTCGGCCACCACCCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCCGCCG------CCGCAGTCG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13700902 157 + 13852661 TCGGCCGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCTCCGCTCAGCTCCGCCACCACTCGGACCCAGCGCTCCCTCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCCGCCG------CCGCAGTCG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465284 157 - 129401213 TCGACTGCGGCGGCGTCGCCCGTCAGGCTCAGGCTCTCGCCACTGAGCTCGGCCACCACCCGCACCCAGCGCTCCCTTAGAAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCTGCTCCCGCAG------CCGCCGTTG i mm10.chr8 C 0 C 0 s canFam3.chr5 80461364 157 + 88915250 tcggccgccgcAGCGTCGCCCGTGAGGCTGAGGCTCTCCCCGCTGAGCTCGGCCACCACCCGGACCCAGCGCTCCCGCAGGAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATggccggccccgctcccgccg------ccgcggccg i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922193 157 + 1009443 TCGGCCGCCGCCGCGTCGCCCGTCAGACTCAGGCTCTCGCCGCTCAGCTCGGCCACCACCCGGACCCAGCGCTCCCTCAGCAGCAGCTCCACCAGCCCCGCTTTGGTGGCCCGCGTCCACACCGCCATGGCCGGCCCCGCTCCCGCCG------CCGCAGTCG i dasNov3.JH569970 C 0 C 0 e manLeu1.NW_012101698v1 6767215 715 - 7209941 M a score=3320779.000000 s hg38.chr16_GL383557v1_alt 42647 198 + 89672 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCTCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-ACGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCT-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCACTCGCCT---CTCGCCGGACGTGGGCAACCC s panTro5.chr16 21468977 198 - 81586097 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCTCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-ACGATTCATTATTCATGA--G--GCCACGCCTGTC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCCCTCGCCT---CTCGCCGGACGTGGGCAACCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535484 198 - 90481686 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCTCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-ACGATTCATTATTCATGA--G--GCCACGCCTGTC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCCCTCGCCT---CTCGCCGGACGTGGGCAACCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768652 198 + 3010529 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCTCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-ACGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----TGTTGTCC--G--ATCCCTCGCCT---CTCGCCGGACGTCGGCAACCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879552 198 + 163208435 CCGCAGCTACCCTCATTCCAGTCAGGCAGTCTCGGCGCTTCCCTCTTCCCGCCCG-GAGAGGCGGGCCCGGCCCCTCCCCCG--C-GCGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCCCTCGCCT---CTCGCCGGACGTGGGCAACCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21352815 198 - 74971481 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-GTGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGGACGTGGGCAGCCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21064835 198 - 78541002 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-GTGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGGACGTGGGCAGCCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459289 198 + 26466322 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-GTGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGGACGTGGGCAGCCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782346 198 + 43916225 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-GTGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGAACGTGGGCAACCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220229 198 + 75399963 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-GTGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CCGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGGACGTGGGCAGCCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6767949 199 - 7209941 CCGCAGCTACCCTCATTCCAGTGAGGCAGCCTCGGCGCTTCCCTCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCG--C-GTGATTTATTATTCATGA--G--GCCACGCCTGCC----------------TCCGGGGGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGGACGTGGGCAGCCC i manLeu1.NW_012101698v1 M 715 C 0 s colAng1.NW_012123265v1 520139 192 + 3907144 ------CTACCCTCATTCCAGTCAGGCAGCCTCGGAGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCCA--C-GTGATTCATTATTCATGA--G--GCCACGCCTGCC----------------TCC-GGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCT--G--ATCCCTTGCCT---CTCGCCGGACGCGGGCAGCCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528039 198 - 44557958 CCACAGCTACCCTCATTCCAGTCAGGCAGCCTCAGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCTTCCCCGG--C-GCGATTCATTATTCATGA--T--GCCACGCCCACC----------------TCC-CGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGCTGTCG--G--ATCCCTCGCTT---GTCGCCGGACGCGGGCAGCCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333565 197 + 6628207 CCACAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCTCTTcccgcccg-gaggggcgggcccggcccctccccgg--c-gcgATTTATTATTCATGC--G--GCCACGCCCACC----------------T-C-CGAGGGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCCTTCGCGC---CTCGCCGGACGTGGGCCGCCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316023 198 - 5917169 CCACAGCTACCCTCATTCCAGTCAGGCGGCTTCGGCGCTTCCCTCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCGG--C-GCGATTTATTATTCATGC--G--GCCACGCCCACC----------------TCC-CGAGGGGCGG------G-----GCGGG-----------------CACAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCCCTCGCCT---CTCGCCGGACGTGGGCAGCCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276798 198 - 10531588 CCACAGCCACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-GAGGGGCGGGCCCGGCCCCTCCCCGG--C-GCGATTCATTATTCATGA--T--GCCACGCCCACT----------------TCC-AGAGAGGCGG------G-----GCCGG-----------------CGCAGCCGCTTCCGGGAGGTG----CAGA----AGTTGTCC--G--ATCCCTCGCCT---CTCGCCGGACGTGGGCAGCCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54928187 204 + 72247402 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-AGGGGGCGGGCCCGGCCGCTCCCCCG-CC-GCGATTCATTATTCATGA-GG--GCCACGCCCACC---------------TTCC-GGAGGGGCGG------G-----CCGGG--------GCC------CGGAGCCGCTTCCGGGAGGTT----AAGA----AGTTGTCC--G--GTCCCTTGCAG---CTCACCGGACGCGGGCGGCCC i micMur3.chr20 C 0 I 72 s proCoq1.NW_012152729v1 2937804 205 + 9850184 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-AGGGGGCGGGCCCGGCCCCTCCCCCC-GC-ACGATTCATTATTCATGAGGG--GCCACGCCCACC---------------TTCC-GGAGGGGCGG------G-----CTGAG--------GGC------CGGAGCCGCTTCCGGAAGGTT----AAGA----AGTTGTCC--G--GTCCCTTGCAG---CTCACCGGACGCGGGCATTCC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13701059 211 + 13852661 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCCTCCCCCTTcccgcccg-agggggcgggcccggcccctcccccg-cg-gcgATTTATTATTCATGAGGG--GCCACGCCCACC--------------TTTCC-GGAGGGGCGG------G-----CGGAG--------GCC-----ACGGAGCCGCTTCCGGCAGCTT----GAGGAGTTAGTTGTCC--A--GTCCCTCGCAG---CTCACCGGACGCCGCAAACCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465441 206 - 129401213 CTGCAGCTCCCCCGATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCGAGGGGGGCGGACCCCTCCCCTCCCCCC--G-GCGATTCATTATTCATGA-GG--GCCACGCCCACT---------------TTCC-GGAGGGGCGGGGGGAAG-----GCCGG-----------------CGAGGCCGCTTCCGGGAGGC-------GA----GGTTGTCCTGG--TTCACTGAAAG---CTCTTCGGAGGTGGGCAGCGC i mm10.chr8 C 0 I 1 s canFam3.chr5 80461521 234 + 88915250 ccgcAGATACCCTCATTCCAGTCGGGCAGCCTCGGCGCTTCCCCCTTcccgcccg-agggggcggggccggccgctccccccgcg-gcgTTTCATTATTCATGA--GGCGCCACGCCCACCggccggggcggggccggcg-ggcggggcgg------g-----gccggcgggcggggccggcgggcggggCGGCTTCCGGGAGGCGGACTCGGG----CGCTGACG--C--GGTGCCTGAAG---CTCGCTGGACCGACGC----- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922350 209 + 1009443 CCGCAGCTACCCTCATTCCAGTCAGGCAGCCTCGGCGCTTCCCCCTTCCCGCCCG-AGGGGGCGGGCCCGGCACCTCCCCCG--CGGCGATTTATTATTCATAA-----GCCACGCCCACC---------------TCCC-GGAGGGGCGG------GGAGAAGCCCG-----------------CGGAGCCACTTCCGGGAGGGT----AAGA----AGTTGCTG--GGAGTCCCCCGACCTGACCTCCAGGCCCTGGACAGCAG i dasNov3.JH569970 C 0 C 0 a score=654925.000000 s hg38.chr16_GL383557v1_alt 42845 62 + 89672 GAATGCGGTGGGACTGCATTTCTCCTCATCCTTCCATTGGCTCCCCAC--GGACCCCCCAGAAA s panTro5.chr16 21469175 62 - 81586097 GAATGCGGTGGGACTGCATTTCTCCTCATCCTTCCATTGGCTCCCCAC--GGACCCCCCAGAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535682 62 - 90481686 GAATGCGGTGGGACTGCATTTCTCCTCATCCTTCCATTGGCTCCCCAC--GGACCCCCCAGAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768850 62 + 3010529 GAATGCGGTGGGACTGCATTTCTCCTCATCCTTCCATTGGCTCCCCAC--GGACCCCCCAGAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879750 62 + 163208435 GAATGCGGTGAGACTGCATTTCTCATCCTCCTTCCATTGGCTCCCCAC--GGACCCCCCAGAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353013 61 - 74971481 GAGTGCAGTGGGACTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065033 61 - 78541002 GAGTGCAGTGGGACTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459487 61 + 26466322 GAGTGCAGTGGGACTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782544 61 + 43916225 GACTGCAGTGGGACTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220427 61 + 75399963 GAGTGCGGTGGGAGTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768148 61 - 7209941 GAGTGCAGTGGGACTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520331 61 + 3907144 GAGTGCGGTGGGACTGCATTTCTCATTCTCCTTCCATTGGCTCCCCAC--GGCTCCCCCCGGA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528237 61 - 44557958 GAGTGCGGTGGGACTGCATTTCTCATCCTCCTTCCATTGGCTCCCCAC--GGA-CCCGCAGAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333762 61 + 6628207 GAGTGCGGTGGGACTGCATTTCTTATCCTCCTTCCATTGGCTCCCCAC--AGA-CCCCCAGAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316221 61 - 5917169 GAGTGCGGTGGGACTGCATTTCTCATCCTCCTTCCATTGGCTCCCCAC--GGA-CCCCCAGAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9276996 61 - 10531588 GAGTGCGGTGGGACTGCATTTCTCATCCTCCTTCCATTGGCTCTCCAC--GGA-CCCCCAGAAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2938009 62 + 9850184 GAGTGTGGTGGGCCTCCAGCTCGCGTTCTCCTTCCACTGGTTCCCCAC--GGCCCCCCGAAAAA i proCoq1.NW_012152729v1 C 0 I 2 s otoGar3.GL873566 13701270 60 + 13852661 CAGTGTGGTGGG-CTTCGGCTCA---TCTTCTTCCACTGGTTCCCCTCTAGTCCCCTCCTCCAA i otoGar3.GL873566 C 0 I 2 s mm10.chr8 22465648 56 - 129401213 TCGTGCAGCGAG---GCACCCCGCCGTC-CTTTGCTTTGGTTCTCCGT--GAC-CTCCTCGAA- i mm10.chr8 I 1 C 0 s canFam3.chr5 80461755 55 + 88915250 -------GCGGGGCTCCGGCCGCTCTTCTCCCCGCGTTCGCCTCCGGA--GGCCACCCCCGAAA i canFam3.chr5 C 0 I 4 s dasNov3.JH569970 922559 60 + 1009443 GAGCGCGGCGAGGCTCCCTCGCTTGTAGACCTTCCGTTCGTTCCCCGC--TGTCCCCTCTAA-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54928391 72 + 72247402 I a score=746128.000000 s hg38.chr16_GL383557v1_alt 42907 61 + 89672 CTCCTGACCTCTACCGTGCAATTCACGGGAGCTGCCCGGGCACGGAAAGCAAAATCAGCTT s panTro5.chr16 21469237 61 - 81586097 CTCCTGACCTCTACCGTGCAATTCACGGGAGCTGCCCGGGCACGGAAAGCAAAATCAGCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535744 61 - 90481686 CTCCTGACCTCTACCGTGCAATTCACGGGAGCTGCCCGGGCACGGAAAGCAAAATCAGCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768912 61 + 3010529 CTTCTGACCTCTACCGTGCAATTCACGGGAGCTGCCCGGGCACGGAAAGCAAAATCAGCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879812 61 + 163208435 CTTCTGACCTCTACCGTGCAATTCACGGGAGCTGCCCGGGCACGGAAAGCAAAATCAGCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353074 42 - 74971481 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065094 42 - 78541002 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459548 42 + 26466322 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782605 42 + 43916225 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220488 42 + 75399963 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768209 42 - 7209941 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520392 42 + 3907144 -------------------AATTCACGGGAGCTGCCCGGGCACGGAAAGTAAAATCAGCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528298 61 - 44557958 CTATTGACCTCTACCGTGCAATTCACGGAAGCTGCCTGGGCACGAAAAGCAAAATCAGCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333823 52 + 6628207 CTGTTGACCTCTACCGTGCAATTCACGG---------GAGCACGAAAAGCAAAATCAGCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316282 61 - 5917169 CTATTGACCTCTACCGTGCAATTCACGGGAGCTGCCTGGGCACGAAAAGCAAAATCAGCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277057 60 - 10531588 CTTTTGACCTCTACCATGCAATTCACGGGAGCTGCCTGGGCACGAAAAGC-AAATCAGCTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54928463 61 + 72247402 CTCCTGACCTCTACCGTGCAATTCAGAGGAGGTGCCCGGGCACAGAAAGCAAAATCCGCTC i micMur3.chr20 I 72 C 0 s proCoq1.NW_012152729v1 2938073 61 + 9850184 CTCCTGACCTCCACCGTGCAATTCAGAGGAGTTGCCCGGACACAGAAAGCCAAATCCGCTC i proCoq1.NW_012152729v1 I 2 C 0 s otoGar3.GL873566 13701332 57 + 13852661 -CTCTGACCTCTACCGTGCAATTCAGGAGAGCTGCCCGGGCACGGAAAGCAAAATCCG--- i otoGar3.GL873566 I 2 C 0 s mm10.chr8 22465704 52 - 129401213 CTCCTCACCTCT---------TCTACGAGAGCTGCCCGGGCAGGGAGAGCAAAGTCAGCTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80461814 61 + 88915250 TGCCTGACCTCAGCCGCGCAGCTCACGGGAGCAGCCGCCACAGGGAGAGTAGAATCAGCTT i canFam3.chr5 I 4 I 193 s dasNov3.JH569970 922619 56 + 1009443 CCCCTGACCTCTAAC---CAGTTCACGTGAGCTGCCTGGGCACAGAAAGCAAATT--GTTT i dasNov3.JH569970 C 0 C 0 a score=1100162.000000 s hg38.chr16_GL383557v1_alt 42968 66 + 89672 G--GAGAAACACTTCTCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC s panTro5.chr16 21469298 66 - 81586097 G--GAGAAACACTTCGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535805 66 - 90481686 G--GAGAAACACTTCGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 768973 66 + 3010529 G--GAGAAACACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879873 66 + 163208435 G--GAGAAACACTTTGCAAGCCTGCAGGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCATAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353116 66 - 74971481 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065136 66 - 78541002 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459590 66 + 26466322 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782647 66 + 43916225 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220530 66 + 75399963 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768251 66 - 7209941 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATTGGTTCGTAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520434 66 + 3907144 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCATTGATGGGTTCGTAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528359 66 - 44557958 G--GAGAAGCACTTTGCAAGCATGCAAGACCCG-G-TGGCACGTTCATTCTTGCACTGATTGGTTCGCAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333875 66 + 6628207 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCACCGATTGGTTCGCAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316343 66 - 5917169 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCACTGATTGGTTCGCAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277117 66 - 10531588 G--GAGAAGCACTTTGCAAGCCTGCAAGACCCG-G-TGGCACGTTCATTCTTGCACTTATTGGTTTGCAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54928524 66 + 72247402 G--GAGAAGCACTTTGCAAGCCTGCAAGCCTGG-G-TGGCACGTTCGTTCTTGCATTGATTGGTTCATAC i micMur3.chr20 C 0 I 75 s proCoq1.NW_012152729v1 2938134 66 + 9850184 G--GAAAAGCACTTTGCAAGCCTGCAAGACTGG-A-TGGCACGTTCATTCTTGCATTGATTGGTTCGTTC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13701389 44 + 13852661 -----------CTTTGCAAGCAT---------------GAACGTTCATTCTTGCATTGATCAGTTCACGC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465756 67 - 129401213 GTAGAGAGGCTCTTTGCGATCCTGCAGGGCCGG-GTTGGCGCGTTCATTCTTGCATTGATTGGTTCAT-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80462068 66 + 88915250 A--AAAGAGCACTTTGCAAGCCTGCAAGACTTG-G-TTGCACGTTTACTCTTGCCTCGGTTGGTTCATGA i canFam3.chr5 I 193 C 0 s dasNov3.JH569970 922675 67 + 1009443 --CCAGAAGCACTTTGCAAGCCTGCAAGATGTGAG-TTGCACATTCATTCTTGCTTCGATTGGTTCCTTC i dasNov3.JH569970 C 0 C 0 a score=887970.000000 s hg38.chr16_GL383557v1_alt 43034 74 + 89672 CCTGTGTA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TACTTAAGCTCAATAGTACCAACA s panTro5.chr16 21469364 74 - 81586097 CCTCTGTA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TACTTAAGCTCAATAGTACCAACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535871 74 - 90481686 CCTCTGTA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TACTTAAGCTCAATAGTACCAACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769039 74 + 3010529 CCTGTGTA-----------------------------CTGAGCGATTAGCCCTGTACTCCGGCTCCTTTTGAGGCCTTG-TACTTAAGCTCAATAGTACCAACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53879939 74 + 163208435 CCTGTGTA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TACTTAAGCTCAATAGTACCAACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353182 74 - 74971481 CCTGTATA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TAGATAAGCTTAGTAGTACCAACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065202 74 - 78541002 CCTGTATA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TAGATAAGCTTAGTAGTACCAACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459656 75 + 26466322 CCTGTAta-----------------------------ctgagcgcttagccctgtactccggctccttttgaggccctgttagataagcttagtagtaccaaca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782713 74 + 43916225 CCTGTAta-----------------------------ctgagcgcttagccctgtactccggctccttttgaggccctg-tagataagctcagtagtaccaaca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220596 70 + 75399963 CC----TA-----------------------------TTGAGCGCTTAGCCCTGTACTCTGGCTCCTTTTGAGGCCCTG-TAGATAAGCTCAATAGTACCAACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768317 74 - 7209941 CCTGTAta-----------------------------ctgagcgcttagccctgtactccggctccttttgaggccctg-tagataagctcagtagtaccaaca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520500 74 + 3907144 CCTGTATA-----------------------------CTGAGCGCTTAGCCCTGTACTCCGGCTCCTTTTGAGGCCCTG-TAGATAAACTCAGTAGTACCAATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528425 74 - 44557958 CCTGTGTA-----------------------------CTGAGCGCTCAACCAGGGACTCCGGCTCCTTCTGAGGCCCTG-TAGATAAGCGCAGTAGTACCAGCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6333941 74 + 6628207 CCTGTGTA-----------------------------CTGAGCGCTCAGCCAGGGACTCCGGCTCCTTTGGAGGCCCTG-TAGATAAGCGCAGTAGTACCAGCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316409 74 - 5917169 CCTGTGTA-----------------------------TTGAGCGCTCAGCCAGGGACTCCGGCTTCTTTTGAGGCCCTG-TAGATAAGCACAGTAGTACCAGCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277183 74 - 10531588 CCTGTGTA-----------------------------CTGAGCACTCAGCCAGGGACTCCCGCTCCTTTTGAGGCCGTG-TAGATAAGCGCAGTAGTACCAGCA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2938200 73 + 9850184 CGTACATA-----------------------------CTGAGCGCTCAACCATGTGCTCAGGCTCCTTTTGA-GTCCCG-GAGATAAGCTGAGTAATATGTACC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13701433 62 + 13852661 CATACATA-----------------------------CGGA------------GTGCTCAGGCTCCTTTTGAGGTCCTA-GAGATAAACTGAGTAATATGTACC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465823 100 - 129401213 --TGCaaaaaaaaaaaaaaaaaaaaaaaaaaGCAGCCctgagcgctcagaggtgtgct-gggctccttttaaggcccta-gagacacactgaataaaatgcacc i mm10.chr8 C 0 C 0 s canFam3.chr5 80462134 67 + 88915250 TGTATTTA-----------------------------CTGAGCGCTCAGCCCCG------AGCTCCTTTTGATGTC-TG-GAGATGAGCTGCATAAAACATACC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922742 74 + 1009443 CGTTTTCA-----------------------------TTGAGCGCTCGGCCGTGTGCTCCGGCTTCTTTTGAGCCCCTG-GAGATGAGCTGAATAAAACGTACC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54928590 75 + 72247402 I a score=1426253.000000 s hg38.chr16_GL383557v1_alt 43108 81 + 89672 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA s panTro5.chr16 21469438 81 - 81586097 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21535945 81 - 90481686 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769113 81 + 3010529 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880013 81 + 163208435 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGCAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353256 81 - 74971481 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065276 81 - 78541002 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459731 81 + 26466322 acagct--gagagtttgcggtctagt-------------ggggaaggaaaatgcagaaccaaccaactaggtgtgatactatgtggttaagtgaca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782787 81 + 43916225 acagct--gagagtttgcggtctagt-------------ggggaaggaaaatgcagaaccaaccaactaggtgtgatactatgtggttaagtgaca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220666 81 + 75399963 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768391 81 - 7209941 acagct--gagagtttgcggtctagt-------------ggggaaggaaaatgcagaaccaaccaactaggtgtgatactatgtggttaagtgaca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520574 81 + 3907144 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528499 81 - 44557958 ACAGCT--GAGAGTCTGCGGTCTAGT-------------GGGGAAGGAAAATACAGAACCAACCAACTAGGTGTGATAATACGTGGTTAAATGACA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6334015 81 + 6628207 ACAGCT--GAGAGCTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTACGTGGTTAAATGACA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316483 81 - 5917169 ACAGCT--GAGAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGATACTGCGTGGTTAAATGACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277257 79 - 10531588 ACAGCT----GAGTTTGCGGTCTAGT-------------GGGGAAGGAAAATGCAGAACCAACCAACTAGGTGTGCTACTACGTGGTTAAATGACA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54928665 81 + 72247402 ACAGCT--GAGCGCTTGCGGTTTCCT-------------AGGGAAGGAAAACGCTGAACCAACCAGCTAGGTGTGATACTATGTGGTTAAGTGACA i micMur3.chr20 I 75 I 948 s proCoq1.NW_012152729v1 2938273 81 + 9850184 ACAGCT--GAGCGCTTGCGGTCTCGA-------------AGGGAAGGAAAACGCTGAACCCACCAACTAGGTGTGATACTATGTGGTTAAGTGACA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13701495 81 + 13852661 ACAGCT--GAGAGCTTGCGGTCTAGT-------------AGGGAAGGAAAACGCAGAACCAGCCAACTAGGTGTGATACTATGTGGTTAAGTGACA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22465923 78 - 129401213 tcagccgagagagcttgtggtctaat-------------gggaaagaaaaa--cagaggcaaccagCTAGGTGTGATTCTCTGTGGTTAAAAA--- i mm10.chr8 C 0 C 0 s canFam3.chr5 80462201 81 + 88915250 ACAGTT--AAGAGCTGGCGGTCTAGT-------------GGGGGAGGAGAAAGGAGAACCAACCAACCCCGGGTGATACGATGTGGTTAAGTGACA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922816 92 + 1009443 ACAG-T--AAGAGCTCACGGTCTAGTGGGGCGGGGGGAGGGGGGAGGGAGGGGCATATCCAGCCAATGGGATGTGAGTCTATGTGCTTAA-TGACT i dasNov3.JH569970 C 0 C 0 a score=467462.000000 s hg38.chr16_GL383557v1_alt 43189 38 + 89672 TGCAGAAGACGTCCCC-AGAACAGCATAAAAGGAACA-TT s panTro5.chr16 21469519 38 - 81586097 TGCAGAAGACGTCCCC-AGAACAGCATAAAAGGAACA-TT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536026 38 - 90481686 TGCAGAAGACGTCCCC-AGAACAGCATAAAAGGAACA-TT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769194 38 + 3010529 TGCAGAAAACGTCCCC-AGAACAGCATAAAAGGAACA-TT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880094 38 + 163208435 TGCAGAAAACGTCCCC-AGAACAGCATAAAAGGAACA-TT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353337 38 - 74971481 TGCAGAAAACGTCCCC-AGAACAGCATAAAAGGAACA-TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065357 38 - 78541002 TGCAGAAAACGTCCCC-AGAACAGCATAAAAGGAACA-TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459812 38 + 26466322 tgcagaaaacgtcccc-agaacagcataaaaggaaca-TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782868 38 + 43916225 tgcagaaaatgtcccc-agaacagcataaaaggaaca-TT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220747 38 + 75399963 TGCAGAAAACGTCCCC-AGAACAGCATAAAAGGAACA-TT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768472 38 - 7209941 tgcagaaaacgtcccc-agaacagcataaaaggaaca-TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520655 38 + 3907144 TGCAGAAAACGTCCCT-AGAACAGCATAAAAGGAACA-TT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21528580 38 - 44557958 TACAGAAAATGTCCCC-AGAACAGTATAAAAGGAACA-TT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6334096 38 + 6628207 TACAGAAAACGTCCCC-AGAACAGTATAAAAGGAACA-TT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316564 38 - 5917169 TACAGAAAACGTCCCC-AGAACAGTATAAAAGGAACA-TT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277336 38 - 10531588 TACAGAAAACGTCCCC-AGAACGGTATAAAAGGAACA-TT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2938354 38 + 9850184 TGTAGGAAAACCTCCC-CCAGCAGAATAAAAAGAACAGT- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13701576 23 + 13852661 TGTAGAAAATGCTTCC---------------AGAACC-T- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466001 38 - 129401213 GACTGCAGACCTCCCTAAGAACAGGATAAAAC-AACA-TT i mm10.chr8 C 0 C 0 s canFam3.chr5 80462282 37 + 88915250 TGTAGAAAACACCCTG-AGAGCCA-GTAAAAGAAACA-TC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922908 29 + 1009443 --TAGA-------CCG-AGAGCAGAGTGGAAGGAACA-TT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54928746 948 + 72247402 I a score=413024.000000 s hg38.chr16_GL383557v1_alt 43227 30 + 89672 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG s panTro5.chr16 21469557 30 - 81586097 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536064 30 - 90481686 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769232 30 + 3010529 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880132 30 + 163208435 TGGTTAGGCCTG-GGGTTAGCTTCACAGAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353375 30 - 74971481 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065395 30 - 78541002 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14459850 30 + 26466322 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782906 30 + 43916225 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220785 30 + 75399963 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768510 30 - 7209941 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520693 30 + 3907144 TGGTTAGGCCTG-GGGTCAGCCTCACAGAGG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334134 28 + 6628207 TGGTTAGGCCTG-GGGTCAACTTAAC--AGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316602 30 - 5917169 TTATTAGGCCTG-GGGTTAGCTTCACAGAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277374 30 - 10531588 TGGTTAGGCCTG-GGGTCAGCTTCACAGAGG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2938392 30 + 9850184 TGGTTGGACCCG-AGGTCAGTTTCACAGAGG i proCoq1.NW_012152729v1 C 0 I 342 s otoGar3.GL873566 13701599 30 + 13852661 GAGTAGGACCTG-AGGTCAGTTTCACAGAGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466039 23 - 129401213 TGGTTAGTCTTG-GTGTGAG---CACA---- i mm10.chr8 C 0 C 0 s canFam3.chr5 80462319 30 + 88915250 TGGTTGGGCCTG-GGGTCAGCTTCACAGAGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922937 31 + 1009443 TGGTTCGGCTAACGGGTCAGCTTTACAGAGG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54928746 948 + 72247402 I e calJac3.chr20 21528618 0 - 44557958 C a score=1222530.000000 s hg38.chr16_GL383557v1_alt 43257 115 + 89672 TAACAACGGACGGT-------------------GAACAGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTCTTCTT s panTro5.chr16 21469587 115 - 81586097 TAACAACGGACGGT-------------------GAACAGCTCAAG---CAAAGGTCCCACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTCTTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536094 115 - 90481686 TAACAACGGACGGT-------------------GAACAGCTCAAG---CAAAGGTCCCACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTCTTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769262 115 + 3010529 TAACAACGGACGGT-------------------GAACAGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTCTTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880162 115 + 163208435 TAACAACGGGCAGT-------------------GAACAGCTCAAG---CAAAAGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACGATGTCTTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353405 115 - 74971481 TGACAACGGAGGGT-------------------GAACAGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTTTTCTT i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21065425 115 - 78541002 TGACAACGGAGGGT-------------------GAACAGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTTTTCTT i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14459880 115 + 26466322 TGACAACGGAGGGT-------------------GAACAGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTTTTCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20782936 115 + 43916225 TGACAACGGAGGGT-------------------GAACGGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTTTTCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220815 115 + 75399963 TGACAACGGAGGGT-------------------GAACAGCTCAAG---CAAATGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTTTTCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768540 115 - 7209941 TGACAACGGAGGGT-------------------GAACGGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAATTCAAGAGGGAACCATGTTTTCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520723 115 + 3907144 TGACAACGGAGGGT-------------------GAACAGCTCAAG---CAAAGGTCCAACAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTC----GTTTACTTGCCTGTAAGTCAAAAGGGAACCATGTTTTCTT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334162 133 + 6628207 TGACAGTGGAGGGTGAA-TACCTCAAGCACAGAGAACAGTGCAAG---CAAAGGTCCAGCAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTA----TTTTAATTGCCTGTAATTCCAGAGGGGACCATGTCTTCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316632 133 - 5917169 TGACAGTGGAGGGTGAA-TAGATCAAGCAGAGAGAACAGCGCAAG---CAAAGGTCCAGCAGCATG-ATCCAAGCCTTTGTCA--ATGTTTTGTAATCTA----CTTTAATTGCCTGTAATTCCAGAGGGAACCATGTCTTCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277404 133 - 10531588 TGACAGTGGAGGGTGAA-TAGCTCAAGCAGAGAGAACAGCGCAAG---CAAAGGTCCAGCAGCATG-ATTCAAGCCTTTGTCA--ATGTTTTGTAATCTA----CTTTAATTGCCTGTAATTCCAGAGGGGACCATGTCTTCTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13701629 132 + 13852661 TGAGGATGAAGAGCAAA-CAACTCAAGCAGAAGGAACAGCATAAG---CAAAGGTCCACAAGCATGAATCCAAGCCGTTGTCACTCTGCTTTGTAATCT-----GCTTACTTGCCTATAGTTTGAGAGGAA---CTGTCTTCTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466062 114 - 129401213 ----AGCAGGGGAC---------------------ACAGCATAAGTGACATGGGATCAAAGGTGTGGATCCAAGACTTTGTCA--CTGCTTTTAAAAATCACCTGTCTGCTGGCCTGTAATT--AGAGGGGACC-TGTCTTCTT i mm10.chr8 C 0 I 424 s canFam3.chr5 80462349 137 + 88915250 TGACACTGGAAGCTGAG-TAGGTGGAGCAGAGAGAATTGCATAAG---CAAAGGTCCAGAGACATG-AATACAGCATTTGTTACTCTGCTTTGTAATCACCT--GTTTACTTCCCGGGAGTGAGAGAGGGGACCATTTCTTCTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 922968 139 + 1009443 CGACATTggagggtgaaccagctcaagtagaggaaacagtttaag---caaaggtctggagacacgaaTCTAAACACTTGGCATTCTGCTTTGTAATTACCT--GTTTACTTACCTATAATGTGAGAGGCGACCATGTCTTCCT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54928746 948 + 72247402 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e calJac3.chr20 21528618 0 - 44557958 C a score=544226.000000 s hg38.chr16_GL383557v1_alt 43372 44 + 89672 AAACCCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA s panTro5.chr16 21469702 44 - 81586097 AAACCCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536209 44 - 90481686 AAACCCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769377 44 + 3010529 AAACCCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880277 44 + 163208435 AAACCCCGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353521 44 - 74971481 AAACTCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21065541 44 - 78541002 AAACTCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14459995 44 + 26466322 AAACTCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783051 44 + 43916225 AAACTCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220930 44 + 75399963 AAACTCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768655 44 - 7209941 AAACTCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520838 44 + 3907144 AAACCCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334295 44 + 6628207 AAACGCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316765 71 - 5917169 AAACCCTGAAGCCACAATTGGCAGGCCTCAAGGATATTTGCAGAATAATGGTGTCTTAGGATATTTGCAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277537 44 - 10531588 AAACCCTGAAGCCACAATTGGCAGGCCTCA---------------------------AGGATATTTGCAGG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13701761 43 + 13852661 AAGCTCTGCAGTCAC-ATTGGCAGGCCTCA---------------------------AAGATATTTGCAGA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80462486 44 + 88915250 CAGCCCTGCAGCCACAATAGGGAGGCCTCA---------------------------AAGATATTTACAGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923107 44 + 1009443 CAGCCCTGCAGTCACAATAGGTAGGCTTCA---------------------------AAGGTATTTGCAGA i dasNov3.JH569970 C 0 I 4 e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e calJac3.chr20 21528618 0 - 44557958 C a score=21101.000000 s hg38.chr16_GL383557v1_alt 43416 2 + 89672 AT s panTro5.chr16 21469746 2 - 81586097 AT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536253 2 - 90481686 AT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769421 2 + 3010529 AT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880321 2 + 163208435 AC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353565 2 - 74971481 AT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065585 2 - 78541002 AT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460039 2 + 26466322 AT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783095 2 + 43916225 AT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58220974 2 + 75399963 AT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6768699 2 - 7209941 AT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 520882 2 + 3907144 AT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334339 2 + 6628207 AT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316836 2 - 5917169 AT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277581 2 - 10531588 AT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13701804 2 + 13852661 AT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80462530 2 + 88915250 AC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e calJac3.chr20 21528618 0 - 44557958 C a score=616943.000000 s hg38.chr16_GL383557v1_alt 43418 72 + 89672 GATGGTGTCttagggttc-----------ttcagagaaaccaaccaataggatatatagagatatataaat---ttattattatta s panTro5.chr16 21469748 72 - 81586097 GATGGTGTCttagggttc-----------ttcagagaaaccaaccaataggatatatagagatatataaat---ttattattatta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536255 72 - 90481686 GATGGTGTCttagggttc-----------ttcagagaaaccaaccaataggatatatagagatatataaat---ttattattatta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769423 72 + 3010529 GATGGTGTCttagggttc-----------ttcagagaaaccaaccaataggatatatagagatatataaat---ttattattatta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880323 72 + 163208435 AATAGTGCCttagggttc-----------ttcagagaaaccaactaataggatatatagagatgtataaat---ttattattatta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353567 72 - 74971481 GATGGTGTCTTATggttc-----------ttcagagaaaccaatcaataggatatatagagatatataaat---ttattattatta i rheMac8.chr20 C 0 I 6 s macFas5.chr20 21065587 72 - 78541002 GATGGTGTCTTATggttc-----------ttcagagaaaccaatcaataggatatatagagatatataaat---ttattattatta i macFas5.chr20 C 0 I 6 s macNem1.NW_012011355v1 14460041 75 + 26466322 GATGGTGTCTTATggttc-----------ttcagagaaaccaatcaataggatatatagagatatataaatttattattattatta i macNem1.NW_012011355v1 C 0 I 6 s cerAty1.NW_011999143v1 20783097 72 + 43916225 GATGGTGTCTTATggttc-----------ttcagagaaaccaatcaataggatatatagagatatataaat---ttattattatta i cerAty1.NW_011999143v1 C 0 I 6 s chlSab2.chr5 58220976 68 + 75399963 GATGGTGTCTTATggttc-----------ttcagagaaaccaatcaatagg----atagagatatataaat---ttattatTATTA i chlSab2.chr5 C 0 I 182 s manLeu1.NW_012101698v1 6768701 71 - 7209941 GATGGTGTCTTATggttc-----------ttcagagaaaccaatcaatagga-atatagagatatataaat---ttattattatta i manLeu1.NW_012101698v1 C 0 I 6 s colAng1.NW_012123265v1 520884 72 + 3907144 GATGGTGTCTTACggttc-----------ttcagagaaaccaatcaataggatatatagagatatataaat---ttattattatta i colAng1.NW_012123265v1 C 0 I 3 s saiBol1.JH378225 6334341 83 + 6628207 GATGGTGTCTTAGGATATTTACAGACTGAttcagagaaacgaatcaataaaatatataaagatgtataaat---taattattatta i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316838 83 - 5917169 GATGGTGTCTTAGGATATTTGCAGATTGAttcagagaaacaaatcaataggatatataaagatgtataaat---ttattattatta i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277583 80 - 10531588 GATGGTGTCTTAGGATATTTGCAGATTGAttcagagaaacgaatcaatcggatatataaagatgtataaat------ttattatta i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13701806 66 + 13852661 GATGGGGCAttaggaatc-----------tctagagaaacaaaccaatagaatacacatagatacataaat---ttgtta------ i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e calJac3.chr20 21528618 0 - 44557958 C a score=1170593.000000 s hg38.chr16_GL383557v1_alt 43490 144 + 89672 caagggactggccacgagattatggatgctgagaagtcccacgatctgccatctgcaaactgcaggcccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagaccca---gaatcagtggtataa--acctgagatt s panTro5.chr16 21469820 144 - 81586097 caagggactggccacgagattatggatgctgagaagtcccacgatctgccatctgcaaactggaggcccaggaaagttggtggtgcacttccaatccaatcccaaaggcctgagaccca---gaatcagtggtataa--acctgagatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536327 144 - 90481686 caagggactggccacgagattatggatgctgagaagtcccacgatctgccacctgcaaactggaggcccaggaaagttggtggtgcacttccaatccaatcccaaaggcctgagaccca---gaatcagtggtataa--ACCTGAGATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769495 144 + 3010529 caagggactggccacgagattatggatgctgagaagtcccacgatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagaccca---gaatcagtggtataa--acctgagatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880395 144 + 163208435 taagggactagccacgagattatggatgctgagaagtcccacaatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagaccca---gaatcagtggtataa--ACCTGAGATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353645 147 - 74971481 taagggactggccacgagattatggatgctgagaagttccacgatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagacgcacgggaaccagtggtgtaa--acctgggccc i rheMac8.chr20 I 6 C 0 s macFas5.chr20 21065665 147 - 78541002 taagggactggccacgagattatggatgctgagaagttccacgatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagacgcaggggaaccagtggtgtaa--acctgggccc i macFas5.chr20 I 6 C 0 s macNem1.NW_012011355v1 14460122 147 + 26466322 taagggactggccacgagattatggatgctgagaagttccacgatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagacgcaggggaaccagtggtgtaa--acctgggccc i macNem1.NW_012011355v1 I 6 C 0 s cerAty1.NW_011999143v1 20783175 147 + 43916225 taagggactggccacgagattatggatgctgagaagttccacgatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaagcccaaaggcctgagacgcaggggaaccagtggtgtaa--acctgggccc i cerAty1.NW_011999143v1 I 6 C 0 s manLeu1.NW_012101698v1 6768778 147 - 7209941 taagggactggccacgagattatggatgctgagaagttccacgatctgccatctgcaaactggagacccaggaaagttggtggtgcacttccaatccaggcccaaaggcctgagacgcaggggaaccagtggtgtaa--acctgggccc i manLeu1.NW_012101698v1 I 6 C 0 s colAng1.NW_012123265v1 520959 142 + 3907144 taagggactggccacgagattatggatgctgagaagttccacgatctgccatctgcaaactggagacccaggaaagttggtggttcacttccaa-----gcccaaaggcctgagacgcaggggaaccagtggtgtaa--acctgagatt i colAng1.NW_012123265v1 I 3 C 0 s saiBol1.JH378225 6334424 142 + 6628207 taagggactggtcacgagattatggatgctgagaagtcccatgatctgccatctgcaaattggagggccaggaaagttagtggtgtacttccaa-----gcccaaaggcctgaggcccaagggaaccagtggtgtaa--acctgagact i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3316921 142 - 5917169 taagggactggtcacgagattatggatgctgagaagtcccatgatctgccatctgcaaattggaggcccaggaaagttggcagtgtacttccaa-----gcccaaaggtctgaggcccaggggaaccagtggtataa--acctgagact i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277663 142 - 10531588 taagggactggtcacgagattatggatgctgagaagtcccatgatctgccatctgcaaattggaggcccaggaaagttggtggtgtacttccaa-----gcccaaaggcctgaggcccaggggaaccagtagtgtaa--acctgagact i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13701872 147 + 13852661 caagggattgaacacaagattatgcagagtgaaaagtcctaccttctactacctgcaaactagagccccagagaagttggtggtgtacttttgacctaagcccaaaggcctaagaacccaggtaaccaatggcataagtaccaaagt-- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e chlSab2.chr5 58221044 182 + 75399963 I e calJac3.chr20 21528618 0 - 44557958 C a score=147261.000000 s hg38.chr16_GL383557v1_alt 43634 27 + 89672 ga------aagtctgggccgggcgcggtggctc s panTro5.chr16 21469964 27 - 81586097 ga------aagtctgggccgggcgcggtggctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536471 27 - 90481686 GA------AAGTCTGggccgggcgcggtggctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769639 27 + 3010529 ga------aagtctgggccgggcgcggtggctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880539 27 + 163208435 GA------AAGTCTGGGCTGGGCGCGGTGGCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353792 33 - 74971481 ggcgcggtggctcaaggccgggcgcggtggctc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065812 33 - 78541002 ggcgcggtggctcaaggccgggcgcggtggctc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460269 33 + 26466322 ggcgcggtggctcaaggccgggcgcggtggctc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783322 33 + 43916225 ggcgcggtggctcaaggccgggcgcggtggctc i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6768925 33 - 7209941 gGCGCGGTGGCTCAAggccgggcgcggtggctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 521101 27 + 3907144 ga------aagTCTGggcccggcgcggtggctc i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334566 27 + 6628207 ga------aagtctggacccTgcacagtggctc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3317063 27 - 5917169 ga------aagtccggacccTgcacagtggctc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277805 27 - 10531588 ga------AAGTCTGGACCCTgcacggtggctc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e chlSab2.chr5 58221044 182 + 75399963 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=806921.000000 s hg38.chr16_GL383557v1_alt 43661 160 + 89672 aag--------------------cctttaatcccagcactttgagaggctgaggtgggcggatcacctgag--------gtcacgagtttgagacaagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcgt-g--gt-ggcacatgcctgtaatcccagctacttgg s panTro5.chr16 21469991 160 - 81586097 aag--------------------cctttaatcccagcactttgagaggctgaggtgggcggatcacctgag--------gtcacgagttcgagacaagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcgt-g--gt-ggcacacgcctgtaatcccagctacttgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21536498 161 - 90481686 aag--------------------cctttaatcccagcactttgagaggctgaggtgggcggatcacctgag--------gtcacgagttcgagacaagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcgtag--gt-ggcacacgcctgtaatcccagctacttgg i panPan2.chr16 C 0 M 1003 s gorGor5.CYUI01000018v1 769666 160 + 3010529 aag--------------------cctttaatcccagcactttgagaggctgaggtgggcggatcacctgag--------gtcacgagttcgagacaagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcgt-g--gt-ggcacatgcctgtaatcccagctacttgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880566 180 + 163208435 AAggccgggcaaggtggctcaaacctttaatcccagcactttgagaggctgaggtaggcagatcacctgag--------gtcacgagttcgagacaagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaataagccgggcat-g--gt-ggcacatgtctgtaatcccagctacttgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353825 160 - 74971481 aaa--------------------cctttaatcccagcactttgagaggccgaggtgggtggatcacctgaggtcatgaagtcatgagttcgagacaagcctgaccaacatggagaaacaccatctctactaaaaatacaaaaaattagccgggcat-g--gt-ggcac--------aatcccagctactcgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21065845 160 - 78541002 aaa--------------------cctttaatcccagcactttgagaggccgaggtgggtggatcacctgaggtcatgaagtcatgagttcgagacaagcctgaccaacatggagaaacaccatctctactaaaaatacaaaaaattagccgggcat-g--gt-ggcac--------aatcccagctactcgg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460302 160 + 26466322 aaa--------------------cctttaatcccagcactttgagaggccgaggtgggtggatcacctgaggtcatgaagtcatgagttcgagacaagcctgaccaacatggagaaacaccatctctactaaaaatacaaaaaattagccgggcat-g--gt-ggcac--------aatcccagctactcgg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783355 160 + 43916225 aaa--------------------cctttaatcccagcactttgagaggccgaggtgggtggatcacctgaggtcatgaagtcatgagttcgagacaagcctgaccaacatggagaaacactatctctactaaaaatacaaaaaattagccgggcat-g--gt-ggcac--------aatcccagctactcag i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6768958 160 - 7209941 aaa--------------------cctttaatcccagcactttgagaggccgaggtgggtggatcacctgaggtcatgaagtcatgagttcgagacaagcctgaccaacatggagaaacaccatctctactaaaaatacaaaaaattagccgggcat-g--gt-ggcac--------aatcccagctactcgg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 521128 154 + 3907144 aaa--------------------cctttaatcccagcactttgagaggccgaggtgggcggatcacctgag--------gtcatgagttccagacaagcctgaccaacatggagaaacaccatctctactaaaaatacaaaaagttagctgggcat-ggagt-agtac--------aatcccagctactcgg i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334593 156 + 6628207 acg--------------------cctgtaatcccagcactttgagaggccaaggc-ggtggattgcctgag--------gtcaggagttctaggccagcctggacaacatggtgaaacctggtctctattaaaaatacaaaaaattagccaggcgt-g--gcaggcac----ctataatcccaactactcag i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e chlSab2.chr5 58221044 182 + 75399963 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=454228.000000 s hg38.chr16_GL383557v1_alt 43821 101 + 89672 gaggctgaggcaggagaattgcttgaacctgggaggcagagattgcggtgagctgagatggcaccattgcactccagcctgggcaacaagagcaaaactct s panTro5.chr16 21470151 101 - 81586097 gaggctgaggcaggagaattgcttgaacctgggaggcagagattgcggtgagctgagatggcaccattgcactccagcctgggcaacaagagcaaaactct i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769826 101 + 3010529 gaggctgaggcaggagaattggttgaacctgggaggcagaaattgcggtgagctgagatggcaccattgcactccagcctgggcaacaagagtaaaactct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880746 101 + 163208435 gaggctgaggcaggagaattgcttgaacccgggaggcagaggttgtggtgagctgagatggcaccattgcactccagcctgggcaacaagagcaaaactct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21353985 100 - 74971481 gaggctgaggcaggagaattgcttgaacccagga-gcggaggttgcagtgagctgagatggcgccactgtactccagcctgggcaacaagaacaaaactct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066005 100 - 78541002 gaggctgaggcaggagaattgcttgaacccagga-gcggaggttgcagtgagctgagatggcgccactgtactccagcctgggcaacaagaacaaaactct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460462 100 + 26466322 gaggctgaggcaggagaattgcttgaacccagga-gcggaggttgcagtgagctgagatggcgccactgcactccagcctgggcaacaagaacaaaactct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783515 100 + 43916225 gaggctgaggcaggagaattgcttgaacccagaa-gcggaggttgcagtgagctgagatggcgccattgcactccagcctgggcaacaagaacaaaactct i cerAty1.NW_011999143v1 C 0 I 291 s manLeu1.NW_012101698v1 6769118 100 - 7209941 gaggctgaggcaggagaattgcttgaacccagaa-gcggaggttgcagtgagctgagatggcgccattgcactccagcctgggcaacaagaacaaaactct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 521282 101 + 3907144 gaggctgaggcagaagaattgcctgaacctgggaggcggaggttgtagtgagctgagatggcgccattgcactccagcctgggcaacaagagcaaaactct i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6334749 99 + 6628207 gaggctgaggcagaataattgcttgaacctgggaggtggaggttgcagtgagccaagatcgcactactgcactccagcctgggcaacaagagtgaaact-- i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e chlSab2.chr5 58221044 182 + 75399963 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=33663.000000 s hg38.chr16_GL383557v1_alt 43922 9 + 89672 gcctcaaaa s panTro5.chr16 21470252 9 - 81586097 gcctcaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769927 9 + 3010529 gcctcgaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880847 9 + 163208435 gcctcaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21354085 9 - 74971481 gccccaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066105 9 - 78541002 gccccaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460562 9 + 26466322 gccccaaaa i macNem1.NW_012011355v1 C 0 C 0 s manLeu1.NW_012101698v1 6769218 9 - 7209941 gcctcaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 521383 9 + 3907144 gcctcaaaa i colAng1.NW_012123265v1 C 0 I 1480 s saiBol1.JH378225 6334848 9 + 6628207 gtctcaaaa i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e chlSab2.chr5 58221044 182 + 75399963 I e cerAty1.NW_011999143v1 20783615 291 + 43916225 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=6552.000000 s hg38.chr16_GL383557v1_alt 43931 2 + 89672 aa s panTro5.chr16 21470261 2 - 81586097 aa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769936 2 + 3010529 aa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880856 2 + 163208435 aa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21354094 2 - 74971481 aa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066114 2 - 78541002 aa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460571 2 + 26466322 aa i macNem1.NW_012011355v1 C 0 C 0 s manLeu1.NW_012101698v1 6769227 2 - 7209941 aa i manLeu1.NW_012101698v1 C 0 I 8624 s saiBol1.JH378225 6334857 2 + 6628207 aa i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e chlSab2.chr5 58221044 182 + 75399963 I e cerAty1.NW_011999143v1 20783615 291 + 43916225 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=7644.000000 s hg38.chr16_GL383557v1_alt 43933 3 + 89672 aaa s panTro5.chr16 21470263 3 - 81586097 aaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769938 3 + 3010529 aaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880858 3 + 163208435 aaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21354096 3 - 74971481 aaa i rheMac8.chr20 C 0 I 289 s macFas5.chr20 21066116 3 - 78541002 aaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460573 3 + 26466322 aaa i macNem1.NW_012011355v1 C 0 I 289 s saiBol1.JH378225 6334859 3 + 6628207 aaa i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e chlSab2.chr5 58221044 182 + 75399963 I e cerAty1.NW_011999143v1 20783615 291 + 43916225 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=2588.000000 s hg38.chr16_GL383557v1_alt 43936 16 + 89672 -aaaaaaaaa------agaaaga s panTro5.chr16 21470266 14 - 81586097 -aaaaaaaaa--------aaaga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769941 22 + 3010529 -aaaaaaaaaaaaaagaaaaaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880861 9 + 163208435 -aaaaaacaa------------- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21066119 16 - 78541002 -caacaacaa------aaaaaga i macFas5.chr20 C 0 I 273 s saiBol1.JH378225 6334862 14 + 6628207 gaaaaaagaa--------aggg- i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e macNem1.NW_012011355v1 14460576 289 + 26466322 I e rheMac8.chr20 21354099 289 - 74971481 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e chlSab2.chr5 58221044 182 + 75399963 I e cerAty1.NW_011999143v1 20783615 291 + 43916225 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=3779.000000 s hg38.chr16_GL383557v1_alt 43952 20 + 89672 aagaaagaaagaaaaagaaa s panTro5.chr16 21470280 20 - 81586097 aagaaagaaagaaaaagaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769963 20 + 3010529 aagaaagaaaaaaaaagaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880870 2 + 163208435 ------------------aa i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6334876 17 + 6628207 aagaaaGTCTGAGAAGG--- i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e macNem1.NW_012011355v1 14460576 289 + 26466322 I e rheMac8.chr20 21354099 289 - 74971481 I e macFas5.chr20 21066135 273 - 78541002 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e chlSab2.chr5 58221044 182 + 75399963 I e cerAty1.NW_011999143v1 20783615 291 + 43916225 I e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=8148.000000 s hg38.chr16_GL383557v1_alt 43972 3 + 89672 gtc s panTro5.chr16 21470300 3 - 81586097 gtc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769983 3 + 3010529 gtc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880872 3 + 163208435 GTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21354388 3 - 74971481 GTC i rheMac8.chr20 I 289 C 0 s macFas5.chr20 21066408 3 - 78541002 GTC i macFas5.chr20 I 273 C 0 s macNem1.NW_012011355v1 14460865 3 + 26466322 GTC i macNem1.NW_012011355v1 I 289 C 0 s cerAty1.NW_011999143v1 20783906 3 + 43916225 GTC i cerAty1.NW_011999143v1 I 291 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e chlSab2.chr5 58221044 182 + 75399963 I e saiBol1.JH378225 6334893 0 + 6628207 C e calJac3.chr20 21528618 0 - 44557958 C e otoGar3.GL873566 13702019 0 + 13852661 C a score=69586.000000 s hg38.chr16_GL383557v1_alt 43975 20 + 89672 tgggccgggtgcagtggctt s panTro5.chr16 21470303 20 - 81586097 tgggccgggtgcagtggctt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 769986 20 + 3010529 tgggccgggtgcagtggctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880875 20 + 163208435 TGggccgggtgcagtggcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21354391 20 - 74971481 TGggctgggtgcggtggctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066411 20 - 78541002 TGggctgggtgcggtggctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460868 20 + 26466322 TGggctgggtgcggtggctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783909 20 + 43916225 TGggctgggtgcggtggctt i cerAty1.NW_011999143v1 C 0 C 0 s calJac3.chr20 21528618 20 - 44557958 TGggccgggcgcggtggctc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6334893 19 + 6628207 -Gggccgatggaggtggctc i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9277832 0 - 10531588 C e cebCap1.NW_016107433v1 3317090 0 - 5917169 C e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e chlSab2.chr5 58221044 182 + 75399963 I e otoGar3.GL873566 13702019 0 + 13852661 C a score=274138.000000 s hg38.chr16_GL383557v1_alt 43995 53 + 89672 acacctgtaatcccagcactttgggaggccaaggc-ggtggatcacctggggtc s panTro5.chr16 21470323 53 - 81586097 acacctgtaatcccagcactttgggaggccgaggc-ggtggatcacctggggtc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770006 53 + 3010529 acacctgtaatcccagcactttgggaggccgaggc-ggtggatcacctggggtc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880895 53 + 163208435 acacctgtaatcccagcactttgggatgccgaggt-ggaggatcacctggggtc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21354411 53 - 74971481 acacctgtgatcccagcactttgggatgctgaggc-agtggatcacctggggtc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066431 53 - 78541002 acacctgtgatcccagcactttgggatgccaaggc-agtggatcacctggggtc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460888 53 + 26466322 acacctgtgatcccagcactttgggatgccgaggc-agtggatcacctggggtc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783929 53 + 43916225 acacctgtgatcccagcactttgggatgccgaggc-agtggatcacctggggtc i cerAty1.NW_011999143v1 C 0 C 0 s calJac3.chr20 21528638 52 - 44557958 aagcctgtaatcccagcactttgggaggccgaggcgggtggatcac--gaggtc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6334912 54 + 6628207 atgcctgtaatcccagcactttgggagactgaggcaggtggatcacttgaggtc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3317090 53 - 5917169 acgcctgtcatcccagcactttgggaggccaaggc-ggtggattgcctgaggtc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277832 53 - 10531588 acgcctgtaatcccaacactttgggaggccaaggc-ggtggatcgcctgaggtc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e chlSab2.chr5 58221044 182 + 75399963 I e otoGar3.GL873566 13702019 0 + 13852661 C a score=49094.000000 s hg38.chr16_GL383557v1_alt 44048 10 + 89672 aagagttata s panTro5.chr16 21470376 10 - 81586097 aagagttata i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770059 10 + 3010529 aagagttata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53880948 10 + 163208435 aacagttATA i nomLeu3.chr2 C 0 M 223 s rheMac8.chr20 21354464 10 - 74971481 aagagttcta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066484 10 - 78541002 aagagttcta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460941 10 + 26466322 aagagttcta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783982 10 + 43916225 aagagttcta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221226 10 + 75399963 aagagttcta i chlSab2.chr5 I 182 C 0 s calJac3.chr20 21528690 10 - 44557958 gagagatcga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6334966 10 + 6628207 aggagtttga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3317143 10 - 5917169 gagagttcta i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277885 10 - 10531588 aagagttcca i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e otoGar3.GL873566 13702019 0 + 13852661 C a score=316993.000000 s hg38.chr16_GL383557v1_alt 44058 64 + 89672 gaccagtctggccaacatggtg-aaaccccgtctctactaaaaatacaaaaaattagccaggtgt s panTro5.chr16 21470386 64 - 81586097 gaccagtctggccaacatgggg-aaaccccgtctctactaaaaatacaaaaaattagccaggtgt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770069 64 + 3010529 gaccagtctggccaacatggtg-aaaccccatctctactaaaaatacaaaaaattagccaggtgt i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21354474 64 - 74971481 gaccagtctggccaacatggtg-aaaccccgtctctactaaaaatacaaaaaattagccgggtgt i rheMac8.chr20 C 0 I 20 s macFas5.chr20 21066494 64 - 78541002 gaccagtctggccaacatggtg-aaaccccgtctctactaaaaatacaaaaaattagccgggtgt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14460951 64 + 26466322 gaccagtctggccaacatggtg-aaaccctgtctctactaaaaatacaaaaaattagccgggcgt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20783992 64 + 43916225 gaccagtctggccaacatggtg-aaaccctgtctctactaaaaatacaaaaaattagccgggcgt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221236 64 + 75399963 gaccagtctggccaacatggtg-aaaccccgtctctactaaaaatacaaaaaattagccgggcgt i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21528700 64 - 44557958 gaccatcctggtcaacatggtg-aaaccccgtctctactaaaaatacaaaaaattagctgggcat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6334976 64 + 6628207 gagcagcctggccaatgtggtgaaaactccatctctactaaaaatac-aaacattagctgggtgt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3317153 62 - 5917169 tatcagcccggacaacatggtg-aaacctggtctctattaaagatacaaaaaattagccaggc-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277895 62 - 10531588 caccagcctggacaacatggtg-aaacctggtctctattaaaaatacaaaaaatttgccaggc-- i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6769229 8624 - 7209941 I e otoGar3.GL873566 13702019 0 + 13852661 C e nomLeu3.chr2 53880958 223 + 163208435 M a score=844516.000000 s hg38.chr16_GL383557v1_alt 44122 161 + 89672 ggtggcaggcgcctgcaatcccagctactcaggaggctgaggcaggagaatcgcttgaatccgggaggcagaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacaagagcaaaactccatctccaaaaaaaaaa-----------aaaaaaGTCTGA s panTro5.chr16 21470450 160 - 81586097 ggtggcaggcgcctgcaatcccagctactcaggaggctgaggcaggagaatcgcttgaatccgggaggcagaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacaagagcaaaactccatctcc-aaaaaaaaa-----------aaaaaagtctga i panTro5.chr16 C 0 I 7 s gorGor5.CYUI01000018v1 770133 160 + 3010529 ggtggcaggtgcctgcaatcccagctactcaggaggctgaggcaggagaattgcttgaatctgggaggcagaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacaagagcaaaactccatctcc-agaaaaaaa-----------aaaaaagtctga i gorGor5.CYUI01000018v1 C 0 I 7 s rheMac8.chr20 21354558 144 - 74971481 ---------------tagtcccagctactcaagaggctgaggcaggagaatcacttgaatctggaaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggcaacaagagcaaaattccatctcc--agaaaaaa-----------aagaaagtccga i rheMac8.chr20 I 20 I 7 s macFas5.chr20 21066558 159 - 78541002 ggtggcaggcacctgtagtcccagctactcaagaggctgaggcaggagaatcacttgaatctggaaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggcaacaagagcaaaattccatctcc--agaaaaaa-----------aagaaagtccga i macFas5.chr20 C 0 I 7 s macNem1.NW_012011355v1 14461015 127 + 26466322 ggtggcaggcacctgtagtcccagctactcaagaggctgaggcaggagaatcacttgaatctggaaggcagaggttgcagtgaaccaagattgtgccactgcactccagcctgggcaacaagagcaa--------------------------------------------- i macNem1.NW_012011355v1 C 0 I 3 s cerAty1.NW_011999143v1 20784056 159 + 43916225 ggtggcaggcacctgtagtcccagctactcaagaggctgaggcagcagaatcacttgaatctggaaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggcagcaagagcaaaattccatctcc--agaaaaaa-----------aagaaagtccga i cerAty1.NW_011999143v1 C 0 I 7 s chlSab2.chr5 58221300 159 + 75399963 ggtggcaggcacctgtagtcccagctactcaagaggctgaggcaggagaattgcttgaatctggaaggcagaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacaagagcaaaattccatctcc--agaaaaaa-----------aagaaaGTCCGA i chlSab2.chr5 C 0 I 7 s manLeu1.NW_012101698v1 6777853 159 - 7209941 ggtggcaggcacctgtagtcccagctactcaagaggctgaggcaggagaatcacttgaatctggaaggcagaggttgcagtgagcgaagattgtgccactgcactccagcctgggcaacaagagcaaaattccatctcc--agaaaaaa-----------aagaaaGTCCGA i manLeu1.NW_012101698v1 I 8624 I 7 s calJac3.chr20 21528764 166 - 44557958 ggtggcgagtgcctgtaatcccagctactcaggaggctgaggcggaaaaattgcttgaacccaggaggtggaggttgcgatgagccaagatggcaccactgcactccagcctgggcaacaagaatgaaactgaaaaaaa--aaaaaaaagaa----agggaagaaaGTCTGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6335040 153 + 6628207 ggtggtaggcccttgtaatttcagctcctagggaggctgaggcaggagaattgcttgaacccaggagatggaggttgcagtgagccaagatcgcaccagtgtactccagcctgggtga-aaaagcgagaccctgtctca--aaa----------------cagaaaGTTTGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3317215 169 - 5917169 -gtggcaggcacctataatcctaactactcaggaggctgaggcagaataattgcttgaacccgggaggtggaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacaagaatgaaaatccgcctca--aaaaaaaaaaaaGACAGGGAAGAAAGTCTGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9277957 168 - 10531588 -gtggcaggcacctataatcccaactgctcaggaggctgaggcagaataattgcttgaacccaggaggtggaggttgcagtgagccaagatcgcaccactgcactccagcctgggcaacaagaatgaaactccgtctca--aaa-aaaaaaacgaaagggaagaaaGTCTGA i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e panPan2.chr16 21536659 1003 - 90481686 M e colAng1.NW_012123265v1 521392 1480 + 3907144 I e otoGar3.GL873566 13702019 0 + 13852661 C e nomLeu3.chr2 53880958 223 + 163208435 M a score=9100.000000 s hg38.chr16_GL383557v1_alt 44283 1 + 89672 g s panTro5.chr16 21470617 1 - 81586097 g i panTro5.chr16 I 7 C 0 s panPan2.chr16 21537696 1 - 90481686 g i panPan2.chr16 M 1003 C 0 s gorGor5.CYUI01000018v1 770300 1 + 3010529 g i gorGor5.CYUI01000018v1 I 7 C 0 s rheMac8.chr20 21354709 1 - 74971481 g i rheMac8.chr20 I 7 C 0 s macFas5.chr20 21066724 1 - 78541002 g i macFas5.chr20 I 7 C 0 s macNem1.NW_012011355v1 14461145 1 + 26466322 g i macNem1.NW_012011355v1 I 3 C 0 s cerAty1.NW_011999143v1 20784222 1 + 43916225 g i cerAty1.NW_011999143v1 I 7 C 0 s chlSab2.chr5 58221466 1 + 75399963 g i chlSab2.chr5 I 7 C 0 s manLeu1.NW_012101698v1 6778019 1 - 7209941 g i manLeu1.NW_012101698v1 I 7 C 0 s calJac3.chr20 21528930 1 - 44557958 G i calJac3.chr20 C 0 I 7 s saiBol1.JH378225 6335193 1 + 6628207 G i saiBol1.JH378225 C 0 I 1601 s cebCap1.NW_016107433v1 3317384 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 I 7 s aotNan1.NW_018500622v1 9278125 1 - 10531588 G i aotNan1.NW_018500622v1 C 0 I 7 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e otoGar3.GL873566 13702019 0 + 13852661 C e nomLeu3.chr2 53880958 223 + 163208435 M a score=1748164.000000 s hg38.chr16_GL383557v1_alt 44284 282 + 89672 ccacacgcggtgactcacgcttgtaatcccagcactttgggagaccgaggcaggcagatcacttgaggtcaggagttcgagtccagcctggccaatgtggtgaaacccccgtctctactaagaatacaaacattagccaggcatggtggtgggcccttataattccagctactcgggaggctgaggc---agaattgcttgaacccaggaggtggaggttgcagtgagctgagatcgcaccagtgtactccagcccgggtgacaaagcaagaccctgtctcaaaa s panTro5.chr16 21470618 282 - 81586097 ccacacgcggtgactcacgcttgtaatcccagcactttgggagaccgaggcaggcagatcacttgaggtcaggagttcgagtccagcctggccaatgtggtgaaacccccgtctctactaaaaatacaaacattagccagacatggtggtgggcccttataattccagctactcgggaggctgaggc---agaattgcttgaacccaggaggtggaggttgcagtgagctgagatcgcaccagtgtactccagcccgggtgacaaagcaagaccctgtctcaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21537697 282 - 90481686 ccacacgcggtgactcacgcttgtaatcccagcactttgggagaccgaggcaggcagatcacttgaggtcaggagttcgagtccagcctggccaatgtggtgaaacccccgtctctactaaaaatacaaacattagccagacatggtggtgggcccttataattccagctactcgggaggctgaggc---agaattgcttgaacccaggaggtggaggttgcagtgagctgagatcgcaccagtgtactccagcccgggtgacaaagcaagaccctgtctcaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770301 281 + 3010529 ccacacacggtgactcacgcttgtaatcccagcactttgggagaccgaggcaggcagatcacttgaggtcaggagttcgagtccagcctggccaatatggtgaaacccccgtctctactaaaaatacaaacattagccaggcatggtggtgggcccttataattccagctacttgggaggctgaggc---agaattgcttgaacccaggaggtggaggttgcggtgagctgagatcgcaccagtgtactccag-ccgggtgacaaagcgagaccctgtctcaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21354710 281 - 74971481 ccgcacgcagtggctcacgcctgtaatcccagcactttgggagactgaggcagtcagatcacttgaggtcaggagttcaagaccaggctggccaacgtggtgaaacccccgtctctactaaaaatacaaacattagccggatatggttgtgggcccttataattccatctactcgggaggcggaggcaggagaattgcttgaacccaggaggtggaggttgccgtgagctgaaatcacgccagtgtactccagcctgggcaacaaagcgagaccctgtctc---- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21066725 281 - 78541002 ccgcacgcagtggctcacgcctgtaatcccagcactttgggagactgaggcagtcagatcacttgaggtcaggagttcaagaccaggctggccaacgtggtgaaacccccgtctctactaaaaatacaaacattagccggatatggttgtgggcccttataattccatctactcgggaggcggaggcaggagaattgcttgaacccaggaggtggaggttgccgtgagctgaaatcacgccagtgtactccagcctgggcaacaaagcaagaccctgtctc---- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461146 281 + 26466322 ccgcacgcagtggctcacgcctgtaatcccagcactttgggagactgaggcagtcagatcacttgaggtcaggagttcaagaccaggctggccaacgtggtgaaacccccgtctctactaaaaatacaaacattagccggatatggttgtgggcccttataattccatctactcgggaggcggaggcaggagaattgcttgaacccaggaggtggaggttgccgtgagctgaaatcacgccagtgtactccagcctgggcaacaaagcgagaccctgtctc---- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784223 281 + 43916225 ccgcacgcagtggctcacgcctgtaatcccagcactttgggagactgaggcagtcagatcacttgaggtcaggagttcaagaccaggctggccaatgtggtgaaacccccgtctctactaaaaatacaaacattagccggatatggttgtgggcccttataattccatctactcgggaggcggaggcaggagaattgcttgaatccaggaggtggaggttgccgtgagctgagatcacgccagtgtactccagcctgggcaacaaagcgagaccctgtctc---- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221467 281 + 75399963 ccgcacgcagtggctcacgcctgtaatcccagcactttgggagactgaggcagtcagatcacttgaggtcaggagttcgagaccaggctggccaatgtggtgaaacccccgtctctactaaaaatacaaacattagccggatatggttgtgagcccttataattccagctactcaggaggcggaggcaggagaattgcttgaacccaggaggtggaggttgccgtgagctgagatcacgccagtgtactccagcctgggcaacaaagcgagaccctgtctc---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778020 281 - 7209941 ccgcacgcagtggctcacgcctgtaatcccagcactttgggagaccgaggcagtcagatcacttgaggtcaggagttcaagaccaggctggccaatgtggtgaaacccccgtctctactaaaaatacaaacattagccggatatggttgtgggcccttataattccatctactcgggaggcggaggcaggagaattgcttgaacccaggaggtggaggttgccgtgagctgagatcacgccagtgtactccagcctgggcaacaaagcgagaccctgtctc---- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21528938 285 - 44557958 CTGATAGAggaggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagtttgagagtagcatggccaacgtggtgaaaactccatctctactaaaaataaaaacattagctgggtgtggtggcaggcccttgtaatttcagctcctagggaggctgaggcaggagaattgcttgaatccaggagatggaggttgcagtgagccaagatcacgccagtgtactccagcctgggtgaaaaagtgagaccctgtctaaaaa i calJac3.chr20 I 7 C 0 s cebCap1.NW_016107433v1 3317392 285 - 5917169 CCAATGGAggtggctcatgcctgtaatcccagcactttgggaggctgaggcagttggatcacttgaggtcaggagtttgagagcagcctggccaatgtggtgaaaactccatctctactaaaaatacaaacattagctgggtgtggtggcaggcccttgtaatttcagctcctagggaggctgaggcaggagaattgcttgaacccaggagatggaggttgcagtgagccaagatcacgccagtgtactccagcctgggtgaaaaagcgagaccctgtctcaaaa i cebCap1.NW_016107433v1 I 7 C 0 s aotNan1.NW_018500622v1 9278133 285 - 10531588 ccgatggaggtggctcgtgcctgtaatcccagcactgtgggaggctgaggcaggtggatcacttgaggtcaggagtttgagagcagcctggccaatgtggtgaaaactccatctctactaaaaatacaaacattagctgggtgtggtggcaagcccttgtaatttcagctcctagggaggctgaggcaggagaattgcttgaacccaggagatggaggttgcagtgagccaagatcacgccagtctactccagcctggatgaaaaaaccaaaccctgtctcacaa i aotNan1.NW_018500622v1 I 7 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e mm10.chr8 22466176 424 - 129401213 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e otoGar3.GL873566 13702019 0 + 13852661 C e nomLeu3.chr2 53880958 223 + 163208435 M a score=5348.000000 s hg38.chr16_GL383557v1_alt 44566 2 + 89672 ca s panTro5.chr16 21470900 2 - 81586097 ca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21537979 2 - 90481686 ca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770582 2 + 3010529 ca i gorGor5.CYUI01000018v1 C 0 C 0 s calJac3.chr20 21529223 2 - 44557958 ca i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3317677 2 - 5917169 CA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278418 2 - 10531588 ca i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22466600 2 - 129401213 ca i mm10.chr8 I 424 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e macNem1.NW_012011355v1 14461427 0 + 26466322 C e rheMac8.chr20 21354991 0 - 74971481 C e macFas5.chr20 21067006 0 - 78541002 C e colAng1.NW_012123265v1 521392 1480 + 3907144 I e manLeu1.NW_012101698v1 6778301 0 - 7209941 C e chlSab2.chr5 58221748 0 + 75399963 C e cerAty1.NW_011999143v1 20784504 0 + 43916225 C e saiBol1.JH378225 6335194 1601 + 6628207 I e otoGar3.GL873566 13702019 0 + 13852661 C e nomLeu3.chr2 53880958 223 + 163208435 M a score=92547.000000 s hg38.chr16_GL383557v1_alt 44568 17 + 89672 gaaagtctgagaagggg s panTro5.chr16 21470902 17 - 81586097 gaaagtctgagaagggg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21537981 17 - 90481686 gaaaGTCTGAGAAGGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770584 17 + 3010529 gaaagtctgagaagggg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21354991 16 - 74971481 -aaagtctgagaaaggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067006 16 - 78541002 -aaagtctgagaaaggg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461427 16 + 26466322 -aaagtctgagaaaggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784504 16 + 43916225 -aaagtctgagaaaggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221748 16 + 75399963 -aaaGTCTGAGAAAGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778301 16 - 7209941 -aaaGTCTGAGAAAGGG i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529225 17 - 44557958 gaaaGTTTGAGTGCATG i calJac3.chr20 C 0 I 59 s cebCap1.NW_016107433v1 3317679 17 - 5917169 CAAAGTTTGAGTGCATG i cebCap1.NW_016107433v1 C 0 I 47 s aotNan1.NW_018500622v1 9278420 17 - 10531588 gaaaGTTTGAGTGCATG i aotNan1.NW_018500622v1 C 0 I 84 s otoGar3.GL873566 13702019 17 + 13852661 gaagaccagaaaagggg i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466602 17 - 129401213 gaagaccagagaggcct i mm10.chr8 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e nomLeu3.chr2 53880958 223 + 163208435 M a score=169471.000000 s hg38.chr16_GL383557v1_alt 44585 39 + 89672 gtgagggtgggagttggggtggggggacaatgatgtaag s panTro5.chr16 21470919 39 - 81586097 gtgagggtgggagttggggtgtggagacaatgatgtaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21537998 39 - 90481686 GTGAGGGTGGGAGTTGGGGTggggggacaatgatgtaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770601 39 + 3010529 gtgagggtgggagttggggtggggggacaatgatgtaag i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21355007 36 - 74971481 gtgagggtgggagtt---ggggggggacaatgatgtaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067022 36 - 78541002 gtgagggtgggagtt---ggggggggacaatgatgtaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461443 36 + 26466322 gtgagggtgggagtt---ggggggggacaatgatgtaag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784520 37 + 43916225 gtgagggtgggagtt--gggggggggacaatgatgtaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221764 37 + 75399963 GTGAGGGTGGGAGTT--GGGggggggacaatgatgtaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778317 37 - 7209941 GTGAGGGTGGGAGTT--TGCggggggacaatgatgtaag i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529301 31 - 44557958 GTGAGGGTGGGAGT----ggggaggatc----atgtaag i calJac3.chr20 I 59 C 0 s cebCap1.NW_016107433v1 3317743 31 - 5917169 GTGAGGGTGGGAGT----GGGggggaac----atgtaag i cebCap1.NW_016107433v1 I 47 C 0 s otoGar3.GL873566 13702036 25 + 13852661 -------tgggagta-------ggggcatatactgtaaa i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466619 39 - 129401213 gagggggcagaagcgggggagcagggtcggagtggaaag i mm10.chr8 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e aotNan1.NW_018500622v1 9278437 84 - 10531588 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e nomLeu3.chr2 53880958 223 + 163208435 M a score=346184.000000 s hg38.chr16_GL383557v1_alt 44624 54 + 89672 tcaccatcccactgccaaggccc--------gagagccaggttcaccaaagtctgagggcag s panTro5.chr16 21470958 54 - 81586097 tcaccatcccactgccaaggccc--------gagagccaggttcaccaaagtctgaaggaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538037 54 - 90481686 tcaccatcccactgccaaggccc--------gagagccaggttcaccaaagtctgaaggaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770640 54 + 3010529 tccccatcccactgccaaggccc--------aagagccaggttcaccaaagtctgagggcag i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21355043 54 - 74971481 tccccatcccagtgccaaggcgc--------cagagccaggtgtaccaaagtctgagggcag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067058 54 - 78541002 tccccatcccagtgccaaggcgc--------cagagccaggtgtaccaaagtctgagggcag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461479 54 + 26466322 tccccatcccagtgccaaggcgc--------cagagccaggtgtaccaaagtctgagggcag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784557 54 + 43916225 tccccatcccaatgccaaggcgc--------cagagccaggtgtaccaaagtctaagggcag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221801 54 + 75399963 tccccatcccaatgccaaggcgc--------cagagccaggtgcaccaaagtctgagggcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778354 54 - 7209941 tccccatcccaatgccaaggcgc--------cagagccaggtgtaccaaagtctgagggcag i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529332 54 - 44557958 tccacatccccgtgccaaggccc--------aagagccaggtgcaccaaagtctgagaccag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3317774 53 - 5917169 tccgcatcccagtgccaaggccc--------aagagccaggtgcaccaaagtctga-cccag i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278521 54 - 10531588 tccgcatcccagtgccaaggccc--------aagagccaagtgcaccaaagtctgaggccag i aotNan1.NW_018500622v1 I 84 C 0 s otoGar3.GL873566 13702061 54 + 13852661 tcttgatcacaatgttaatacct--------aagaaccaggagcaccaaaatctgagagcta i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466658 57 - 129401213 ctactatgtaaaagct--ggcccagtccatgaaaaaccaggagccctgaagtgt---ggcag i mm10.chr8 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e nomLeu3.chr2 53880958 223 + 163208435 M a score=12000.000000 s hg38.chr16_GL383557v1_alt 44678 1 + 89672 g s panTro5.chr16 21471012 1 - 81586097 g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538091 1 - 90481686 g i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770694 1 + 3010529 g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881181 1 + 163208435 g i nomLeu3.chr2 M 223 C 0 s rheMac8.chr20 21355097 1 - 74971481 g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067112 1 - 78541002 g i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461533 1 + 26466322 g i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784611 1 + 43916225 g i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221855 1 + 75399963 g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778408 1 - 7209941 g i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529386 1 - 44557958 g i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3317827 1 - 5917169 g i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278575 1 - 10531588 g i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13702115 1 + 13852661 g i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466715 1 - 129401213 g i mm10.chr8 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e proCoq1.NW_012152729v1 2938422 342 + 9850184 I e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=2198541.000000 s hg38.chr16_GL383557v1_alt 44679 240 + 89672 agaagatggatgtcccagctcaggcagagaatgaattccccctacctctgccc-tttgttt-tgctcaggccctcaactgactggatgctgcctgcccacattggtgagggtgatcttcttta--gagtctaccgtggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- s panTro5.chr16 21471013 240 - 81586097 agaagatggatgtcccagctcaggcagagagtgaattccccctacctctgcct-tttgttt-tgctcaggccctcaactgactggatgctgcctgcccacattggtgagggtgatcttcttta--gagtctacagtggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538092 240 - 90481686 agaagatggatgtcccagctcaggcagagagtgaattccccctacctctgcct-tttgttt-tgctcaggccctcaactgactggatgctgcctgcccacattggtgagggtgatcttcttta--gagtctacagtggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770695 240 + 3010529 agaagatggatgtcccagctcaggcagagagtgaattccccctacctctgccc-tttgttt-tgctcaggccctcaactgactggatgctgcctgcccacattggtgagggtgatcttcttta--gagtctaccgtggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggagcccttagcccagtcaagttgacac-----------aaaattaa-ca- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881182 240 + 163208435 agaagatggatgtcccagctcaggcagagagtgaattccccctacctctgccc-tttgttt-tgctcaggccctcaactgattggatgctgcctgcccacattggtgagggtgatcttcttta--gagtctaccatggaaatgctaatctcttcctgaaacacccacacatgtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaggttgacac-----------aaaattaa-ca- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355098 238 - 74971481 agaagataaatgtcccagctcaggc--agagtgaattcccccttcctctgccc-tttgttc-tgctcaggccctcaactgattggatgctgcctgcccacattggtgagggtgacactcttta--gagtctaccatggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067113 238 - 78541002 agaagataaatgtcccagctcaggc--agagtgaattcccccttcctctgccc-tttgttc-tgctcaggccctcaactgattggatgctgcctgcccacattggtgagggtgatactcttta--gagtctaccatggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461534 238 + 26466322 agaagataaatgtcccagctcaggc--agagtgaattcccccttcctctgccc-tttgttc-tgctcaggccctcaactgattggatgctgcctgcccacattggtgagggtgatactcttta--gagtctaccatggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784612 240 + 43916225 agaagatgaatgtcccagctcaggcagagagtgaattcccccttcctctgccc-tttgttc-tgctcaggccctcaactgattggatgctgcctgcccacattggtgggggtgatactcttta--gagtctaccatggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatctcttagcccagtcaagttgacac-----------aaaattaa-ca- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58221856 240 + 75399963 agaagatgaatgtcccagctcaggcagagagtgaattcccccttcctctgccc-tttgttc-tgctcaggccctcaactgattggatgctgcctgcccacaatggtgagggtgatactcttta--gagtctaccatggaaatgctaatctcttcctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatcccttagcccagtcaagttgacac-----------aaaattaa-ca- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778409 240 - 7209941 agaagatgaatgtcccagctcaggcacagagtgaattcccccttcctctgccc-tttgttc-tgctcaggccctcaactgattggatgctgcctgcccacattggtgggggtgatactcttta--gagtctaccatggaaatgctaatctctttctgaaacacccacacaggtatacccagag----gttatg----------------------ttttactagttacctggggatctcttagcccagtcaagttgacac-----------aaaattaa-ca- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529387 239 - 44557958 agaagatctatgtcccagctcaggcagagtgtgaattcccccttcctctgcccttttgttc-tattcaagtcttcaactgattggatgctgcctccccatattggtgagggtga---tcttta--gagtctaccatggaaaggctaatctcttcctgaaacacccacacagatatacccagag----gttatg----------------------ttttactagttacctgggcatcccttagcccagtcaaattgacgc-----------aaaattaacca- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3317828 239 - 5917169 agaagatggatgtcccagctcaggcagagggtgaattcctccttcctctgcccttttgttc-tattcaagtcttcaactgattggatgctgcctgcccacattggtgagggtga---tcttta--gagtctaccatggaaaggctaatctcttcctgaaacacccacacagatatacccagag----gttatg----------------------ttttactagttacctgggcatcccttagcccagtcaaggtgacac-----------aaaatcagcca- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278576 239 - 10531588 agaagatggatgtcccagctcaggaagagggtgaattcccccttcctctgcccttttgttc-tattcaagtcttcaactgattggatgctgcctgctcacattggtgagggtga---tcttta--gagtctaccatggaaagactaatctcttcctgaaacacccacacagatatacccagag----gttatg----------------------ttttactagttacctgggcatcccttagcccaatcaagttgacac-----------aaaatgaacca- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2938764 238 + 9850184 agaagatggatgtcccagctcaagc--agagtgaattcacattttctctgctttttt-----tattcaggccctcaactgattggatgatgcctgcccatattggtgaggg-gatcttctttactcagccaaccactgaaatgctaatctcgtccaaaaacactcacacagtcacaatcggaa----agagtg----------------------ttttgctagttatctgggcatcccttagccgaaacaagttaacacat---------aaaattaa-cc- i proCoq1.NW_012152729v1 I 342 I 1 s otoGar3.GL873566 13702116 243 + 13852661 ----------------------agc--agtgtaaatttactttttctctgcttttctgtttgtaatcaggccctcaactaattggatgatgcctgcccacattatgggggg-tatcttctttactcagccaaccaattaaatactaatctcttctggaaacacccacacaaatacaactggaa----gagatgtggggttttgctttgttttgtttttcaccagttatctgggcctgccttagtctggtcaaattggcatat---------aaaattaa-ac- i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22466716 237 - 129401213 ---agagcgatgtcccagttttcatagagtgagtataccgcgtcttactgttc-cctggca--------gccctcacctgattggatggtgccggttcccactgttgaggacaatcttctctactcaggtcaccatggaaaa---aatttcttccggaa--------acagacacacccagaacggttttaca----------------------tctgtccatccaggcaggcgtcttttagcccagtcaagtgaacacacacacacacaaaaattaa-cca i mm10.chr8 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e micMur3.chr20 54928746 948 + 72247402 I e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=51986.000000 s hg38.chr16_GL383557v1_alt 44919 5 + 89672 tcata s panTro5.chr16 21471253 5 - 81586097 tcata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538332 5 - 90481686 tcata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770935 5 + 3010529 tcata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881422 5 + 163208435 tcaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355336 5 - 74971481 tcaca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067351 5 - 78541002 tcaca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461772 5 + 26466322 tcaca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784852 5 + 43916225 tcaca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222096 5 + 75399963 tcaca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778649 5 - 7209941 tcaca i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529626 5 - 44557958 tcaca i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318067 5 - 5917169 tcaca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278815 5 - 10531588 tcaca i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54929694 5 + 72247402 TCATA i micMur3.chr20 I 948 C 0 s proCoq1.NW_012152729v1 2939003 5 + 9850184 tcata i proCoq1.NW_012152729v1 I 1 C 0 s otoGar3.GL873566 13702360 5 + 13852661 tcata i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22466953 5 - 129401213 tcTGT i mm10.chr8 C 0 C 0 e canFam3.chr5 80462532 0 + 88915250 C e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=57593.000000 s hg38.chr16_GL383557v1_alt 44924 4 + 89672 GATG s panTro5.chr16 21471258 4 - 81586097 GATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538337 4 - 90481686 GATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770940 4 + 3010529 GATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881427 4 + 163208435 GATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355341 4 - 74971481 GATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067356 4 - 78541002 GATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461777 4 + 26466322 GATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784857 4 + 43916225 GATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222101 4 + 75399963 GATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778654 4 - 7209941 GATG i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529631 4 - 44557958 GATG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318072 4 - 5917169 GATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278820 4 - 10531588 GATG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54929699 4 + 72247402 GGTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2939008 4 + 9850184 GGTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13702365 4 + 13852661 GTTG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466958 4 - 129401213 GATG i mm10.chr8 C 0 C 0 s canFam3.chr5 80462532 4 + 88915250 GATG i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 923151 4 + 1009443 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=938886.000000 s hg38.chr16_GL383557v1_alt 44928 68 + 89672 GTTACTTAGGAAGATGCTAGAATTCCAATGTGAAC--AGAGCATAGGGTCAGTGGAAATGGGAGGATATG s panTro5.chr16 21471262 68 - 81586097 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAGGGTCAGTGGAAATGGGAGGATATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538341 68 - 90481686 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAGGGTCAGTGGAAATGGGAGGATATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 770944 68 + 3010529 GTTACTTAGGAAGATGCCAGAATTCCAATATGAAC--AGAGCATAGGGTCAGTGGAAATGGGAGGATATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881431 68 + 163208435 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGGATAGGGTCAGTGGAAATGGGAGGATATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355345 68 - 74971481 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAAGGTCAGTGGAAGTGGGAGGATATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067360 68 - 78541002 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAAGGTCAGTGGAAGTGGGAGGATATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461781 68 + 26466322 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAAGGTCAGTGGAAGTGGGAGGATATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784861 68 + 43916225 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCGTAAGGTCAGTGGAAGTGGGAGGATATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222105 68 + 75399963 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAAGGTCAGTGGAAGTGGGAGGATATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778658 68 - 7209941 GTTACTTAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGTGTAAGGTCAGTGGAAGTGGGAGGATATG i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529635 68 - 44557958 GTTACTGAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCATAAGGTCAGTGGAAATGGGAGGATATG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318076 68 - 5917169 GTTACTGAGGAAGATGCCAGAATTCCAATATGAAC--AGAGCATAGGGTCAGTGGAAATCGGAGGATATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278824 68 - 10531588 GTTACTGAGGAAGATGCCAGAATTCCAATGTGAAC--AGAGCACAGGGTCGGTGGAAATGGGAGGATATG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54929703 68 + 72247402 GACACTTAAGAGGATGCCAGAATTCCAATGGGAAC--AGAGCATAGGGTCAGTGGAAGTGGCAGGATATG i micMur3.chr20 C 0 I 494 s proCoq1.NW_012152729v1 2939012 68 + 9850184 GATACTGAGGAAGATGCCAGAATTCCAATGGGAAC--AGAGCATAGGGTCAGTGGAAGTGGCAGGATATA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13702369 67 + 13852661 GTTACTTAGGAAAATGCTAGAATTCCAATATGAA---GGAGCATAGGGCCAGTAGAAGTGGCAGGATGTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22466962 57 - 129401213 ATTCCTTAGGAAGTTG--------CCAATGTGAAC--AAGACATAAGGTTAGTGGAATTAGGTAG---TG i mm10.chr8 C 0 C 0 s canFam3.chr5 80462536 67 + 88915250 GTTACCTAGGAGGATGCAAGAATT-CAATGTGAGC--AGAGCACAGGGTCTGTGGAGGTGGAAAGAAAGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923155 65 + 1009443 GTTACTAAGGAAGATGCCAGAATTCCAGTGTGAACAGAGAGTATAGGGTCAGTGGAGGTTGTATG----- i dasNov3.JH569970 I 4 C 0 e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=158880.000000 s hg38.chr16_GL383557v1_alt 44996 11 + 89672 AGTGTGAAAAG s panTro5.chr16 21471330 11 - 81586097 AGTGTGAAAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538409 11 - 90481686 AGTGTGAAAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771012 11 + 3010529 AGTGTGAAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881499 11 + 163208435 AGTGTGAAAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355413 11 - 74971481 AGTGTGAAAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067428 11 - 78541002 AGTGTGAAAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461849 11 + 26466322 AGTGTGAAAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784929 11 + 43916225 AGTGTGAAAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222173 11 + 75399963 AGTGTGAAAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778726 11 - 7209941 AGTGTGAAAAG i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529703 11 - 44557958 AGTATGAAAAG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318144 11 - 5917169 AGTATGAAAAG i cebCap1.NW_016107433v1 C 0 I 33 s aotNan1.NW_018500622v1 9278892 11 - 10531588 AGTATGAAAAG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2939080 11 + 9850184 AGCGTGAAAAG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13702436 11 + 13852661 AGTGTGAAAAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22467019 11 - 129401213 AGTGTGCAAGG i mm10.chr8 C 0 C 0 s canFam3.chr5 80462603 11 + 88915250 AGTGTGAAAAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923220 11 + 1009443 AGTGTGAAAAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=15300.000000 s hg38.chr16_GL383557v1_alt 45007 1 + 89672 C s panTro5.chr16 21471341 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538420 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771023 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881510 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355424 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067439 1 - 78541002 C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461860 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784940 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222184 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778737 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21529714 1 - 44557958 C i calJac3.chr20 C 0 I 1 s aotNan1.NW_018500622v1 9278903 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 I 30 s proCoq1.NW_012152729v1 2939091 1 + 9850184 C i proCoq1.NW_012152729v1 C 0 I 364 s otoGar3.GL873566 13702447 1 + 13852661 C i otoGar3.GL873566 C 0 I 44 s mm10.chr8 22467030 1 - 129401213 C i mm10.chr8 C 0 C 0 s canFam3.chr5 80462614 1 + 88915250 C i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923231 1 + 1009443 C i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=3885.000000 s hg38.chr16_GL383557v1_alt 45008 3 + 89672 ATC- s panTro5.chr16 21471342 3 - 81586097 ATC- i panTro5.chr16 C 0 I 6 s panPan2.chr16 21538421 3 - 90481686 Atc- i panPan2.chr16 C 0 I 3 s gorGor5.CYUI01000018v1 771024 3 + 3010529 ATC- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881511 3 + 163208435 ATC- i nomLeu3.chr2 C 0 I 1 s rheMac8.chr20 21355425 3 - 74971481 Att- i rheMac8.chr20 C 0 I 2 s macFas5.chr20 21067440 3 - 78541002 Att- i macFas5.chr20 C 0 I 2 s macNem1.NW_012011355v1 14461861 1 + 26466322 A--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784941 3 + 43916225 ATC- i cerAty1.NW_011999143v1 C 0 I 2 s chlSab2.chr5 58222185 3 + 75399963 ATC- i chlSab2.chr5 C 0 I 3 s manLeu1.NW_012101698v1 6778738 3 - 7209941 ATC- i manLeu1.NW_012101698v1 C 0 I 1 s otoGar3.GL873566 13702492 3 + 13852661 ATC- i otoGar3.GL873566 I 44 I 17 s mm10.chr8 22467031 2 - 129401213 -TT- i mm10.chr8 C 0 I 926 s canFam3.chr5 80462615 3 + 88915250 CTC- i canFam3.chr5 C 0 I 192 s dasNov3.JH569970 923232 3 + 1009443 -TTC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529715 1 - 44557958 I a score=50802.000000 s hg38.chr16_GL383557v1_alt 45011 9 + 89672 ttttttttt s panTro5.chr16 21471351 9 - 81586097 ttttttttt i panTro5.chr16 I 6 C 0 s panPan2.chr16 21538427 9 - 90481686 ttttttttt i panPan2.chr16 I 3 C 0 s gorGor5.CYUI01000018v1 771027 9 + 3010529 ttttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881515 9 + 163208435 ttttttttt i nomLeu3.chr2 I 1 C 0 s rheMac8.chr20 21355430 9 - 74971481 ttttttttt i rheMac8.chr20 I 2 C 0 s macFas5.chr20 21067445 9 - 78541002 ttttttttt i macFas5.chr20 I 2 C 0 s macNem1.NW_012011355v1 14461862 8 + 26466322 -tttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784946 9 + 43916225 ttttttttt i cerAty1.NW_011999143v1 I 2 C 0 s chlSab2.chr5 58222191 9 + 75399963 ttttttttt i chlSab2.chr5 I 3 C 0 s manLeu1.NW_012101698v1 6778742 9 - 7209941 ttttttttt i manLeu1.NW_012101698v1 I 1 C 0 s otoGar3.GL873566 13702512 9 + 13852661 tattttatt i otoGar3.GL873566 I 17 C 0 s dasNov3.JH569970 923235 9 + 1009443 TTTGCTTAT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80462618 192 + 88915250 I e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529715 1 - 44557958 I a score=94659.000000 s hg38.chr16_GL383557v1_alt 45020 20 + 89672 tttctgagacaaga-gtttca s panTro5.chr16 21471360 21 - 81586097 tttctgagacaaggtgtttca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538436 21 - 90481686 ttcttgagacaaggtgtttca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771036 20 + 3010529 tttctgagacaaga-gtttca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881524 20 + 163208435 tttttgagacaaga-gtttca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355439 20 - 74971481 tttttgagacaaga-gtttcg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067454 20 - 78541002 tttttgagacaaga-gtttca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461870 20 + 26466322 tttttgagacaaga-gtttcg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784955 20 + 43916225 tttttgagacaaga-gtttcg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222200 20 + 75399963 tttttgagacaaga-gtttcg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778751 20 - 7209941 tttttgagacaaga-gtttcg i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13702521 19 + 13852661 ttattgagac-aga-gtctca i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462618 192 + 88915250 I e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e colAng1.NW_012123265v1 521392 1480 + 3907144 I e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529715 1 - 44557958 I a score=321754.000000 s hg38.chr16_GL383557v1_alt 45040 55 + 89672 ctctttttgcccaggctggagtgcaatggc-gcgatctcggctcactgcaacctct s panTro5.chr16 21471381 54 - 81586097 ctctttttgcccaggct-gagtgcaatggcggcgatctcggctcactgc-acctct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21538457 55 - 90481686 ctctttttgcccaggctggagtgcaatggc-gcaatctcggctcactgcaacctcT i panPan2.chr16 C 0 M 1430 s gorGor5.CYUI01000018v1 771056 55 + 3010529 ctctttttgcccaggctggagtgcaatggc-acgatctcggctcactgcaacctct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881544 55 + 163208435 ctctttttgcccaggctggagtgcaatggc-gtgatcacggctcactgcaacctct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355459 55 - 74971481 ctctttttgcccaggctggagtgcaatggt-gcgatctcggctcactgcaatcttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067474 55 - 78541002 ctctttttgcccaggctggagtgcaatggt-gcgatctcggctcactgcaatcttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461890 55 + 26466322 ctctttttgcccaggctggagtgcaatggt-gcgatctcggctcactgcaatcttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20784975 55 + 43916225 ctctttttgcccaggctggagtgcaatggt-gcgatctcggctcactgcaatctct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222220 55 + 75399963 ctctttttgcccaggctggagtgcaatggt-gcgatctcagctcactgcaatctct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778771 55 - 7209941 ctctttttgcccaggctggagtgcaatggt-gcgatctcggctcactgcaatctct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 522872 55 + 3907144 CTCTTTttgcccaggctggagtacaatggc-acgatctcggctcactgcaatctct i colAng1.NW_012123265v1 I 1480 C 0 s otoGar3.GL873566 13702540 51 + 13852661 -aactatcatcctgagtagagtgccttggt-g---tcacagctcacggcaacctca i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462618 192 + 88915250 I e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529715 1 - 44557958 I a score=1056173.000000 s hg38.chr16_GL383557v1_alt 45095 226 + 89672 g-cctcccaggttcaaacgattctcctgcctcagactcccgagtagctgg-gattataggcatgtgccaccacg-cctggctaattttgtattttttagtagagacaaggtttctccatgttggccaggctggtcttgaactc-ccgacctcaggtg-atctgcacgcctcggcctcccaaagtgctgggattacaggcatgagccaccacgcccagcTGA---------AAAGC-----ATAAC-------------------- s panTro5.chr16 21471435 226 - 81586097 gccctcccgggttcaaacgattctcctgcctcagact-ccgagtagctggcgattaca-gcatgtgccaccacgccctggctaattttgtattttttagtagagacaaggtttctccatgttggccaggctggtctcgaactc-ccgacctcaggtgaatccgcacgcctcggcctcc--aagtgctgggattacaggcatgagccaccatgcccagccGA---------AAAGC-----ATAAC-------------------- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771111 226 + 3010529 -gcctcctgggttcaagcaattctcctgcctcagactcccgagtagctgg-gattacaggcatgtgccaccaca-cctggctaattttgtattttttagtagagacaaggtttctccatgttggccaggctggtctcgaactc-ccgacctcaggtg-atccgcacgcctcggcctcccaaagtgctgggattacaggcatgagccaccacgcccagccGA---------AAAGC-----ATAAC-------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881599 231 + 163208435 -gcctcccaggttcaagcgattctcctgcctcagactcctgagtagctgg-gattacaggcatgcgccaccagg-cctggctaattttgtattttttagtagagacagggtttctccacgttggccaggctggtcttgaactc-ccgacctcaggtg-atccacatgcctcggcctcccaaagtgctaggattacaggcatgagccaccgcacccagtcGA---------AAAGCATCTTATAAC-------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355514 230 - 74971481 -gcctccagggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccacg-cctgactaattttgtattttttagt-gagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgtgcccagACGA---------AAAGCATCTTATAAC-------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067529 230 - 78541002 -gcctcctgggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccacg-cctgactaattttgtattttttagt-gagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcctgcctcagcctcccaaagtgctgggattacaggcgcgagccaccgtgcccagACGA---------AAAGCATCTTATAAC-------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14461945 230 + 26466322 -gcctcccgggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccaca-cctgactaattttgtattttttagt-gagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcctgcctcggcctcccaaagtgctgggattacaggcgcgagccaccgcgcccagACGA---------AAAGCATCTTATAAC-------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785030 224 + 43916225 -gcctcccgggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccacg-cctgactaattttgtatattttagt-gagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcct------gcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagACGA---------AAAGCATCTTATAAC-------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222275 230 + 75399963 -gcctcccgggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccacg-cctgactaattttgtattttttagt-gagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagACGA---------AAAGCATCTTATAAC-------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6778826 230 - 7209941 -gcctcccgggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccacg-cctgactaattttgtattttttagt-gagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagACGA---------AAAGCATCTTATAAC-------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 522927 231 + 3907144 -ccctcctaggttcaagtgattctcctgcctcagcctactgagtagctgg-gattacaggcatgtgccaccacg-cctgactaattttgcattttttagtagagacagggtttctccatgttggccaggctggtctcaaactc-ctgacctcaggtg-atctgcctacctcagcctcccaaagtgctgggattacaggtgtgagccaccgcacccagccGA---------AAAGCATCTTATAAC-------------------- i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13702591 243 + 13852661 -aactcttggacttaagcaattaccttgcctcagcctcccaagtagctgg-gactataggcacctgccacaaca-cccggctatttttggttgtacttgt-----cattgttgtttagcg--gcccaggccaggttcaaaccctccagcctcagtgt-atgtagct------ggcaccctacccgctgag-ctaccggc----gccACCATGGCTCTATTAtttttagagatagggtctcacaacccaggctggagtgcagtgac i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462618 192 + 88915250 I e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529715 1 - 44557958 I a score=149138.000000 s hg38.chr16_GL383557v1_alt 45321 29 + 89672 AAAATATCGAGGAGTTTGAACTTGACTTT------- s panTro5.chr16 21471661 27 - 81586097 -AAATATCGAAGAGTTTGAACTT-ACTTC------- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771337 29 + 3010529 AAAGTATCGAAGAGTTTGAACTTGACTTT------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881830 29 + 163208435 AAAATATCGAAGAGTTTGGACTTGACTTT------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355744 29 - 74971481 AAAATATCAAAGAGTTTGGACTTGACTTT------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067759 29 - 78541002 AAAATATCAAAGAGTTTGGACTTGACTTT------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462175 29 + 26466322 AAAATATCAAAGAGTTTGGACTTGACTTT------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785254 29 + 43916225 AAAATATCAAAGAGTTTGGACTTGACTTT------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222505 29 + 75399963 AAAATATCAAAGAGTTTGGACTTGACTTT------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779056 29 - 7209941 AAAATATCAAAGAGTTTGGACTTGACTTT------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523158 29 + 3907144 AAAATATCAAAGAGTTTGGACTTGACTTT------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529716 29 - 44557958 AAAACATCAAAGAGTTTGGACTCGACTTT------- i calJac3.chr20 I 1 C 0 s otoGar3.GL873566 13702834 32 + 13852661 ----tattcacaagtgtgatcccattactgatcagc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462618 192 + 88915250 I e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=1353015.000000 s hg38.chr16_GL383557v1_alt 45350 285 + 89672 ATAGATC---------tttt-tttttttttttttttgagatggagtctcattctgtcacccaggctggagtg---cagtggcttgatttcagctcactgcaacctccacctcctagtttcaagcaat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgcgtgccatcacaccagctaatttttgta-ttttagtaaaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--atgatccacccgcctcggcctccc-aaagtgctg-ggatt-acaggcg s panTro5.chr16 21471688 289 - 81586097 ATAGATC---------tttt-tttttttttttttttgagatggagtctcattctgtcacccaggctggagtg---cagtggcttgatctcagctcactgcaacctccacctcctagtttcaagcaat-tctcctgcctcaggcctcccaagtagctgggacttagcaggccgcgtgccatcacaccagctaa-ttttgta-ttttagtaaa-gtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--atgat-cacccgcctcggcctcccaaaagtgctgcggattaacaggcg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771366 294 + 3010529 ATAGATCtttctttcttttc-tttttttttttttttgagatggagtctcattctgtcacccaggctggagtg---cagtggcttgatctcagctcactgcaacctccacctcctagtttcaagcaat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgcgtgccatcacaccagctaatttttgta-ttttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--atgatccgcccgcctcggcctccc-aaagtgctg-ggatt-acaggcg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53881859 279 + 163208435 ATAGATC---------------ttttttttttttttgagatggagtctcattctgtca-ccaggctggagtg---ca-tggcttgatctcagctcactgcaacctccacctcctagtttcaagcaat-tctcctgcctca-gcctcccaagtagctggga-tta-cagg-cgcatgccatcacaccagctaatttttatatttttagtagaggtggggtttcaccattttggtcagactgttctcgaactcctgacctc--atgatccgcccgcctcagcctccc-aaagtgctg-ggatt-acaggcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21355773 290 - 74971481 CTAGATC---------tttcttttttttttttttttgagacagagtctcattctgtcacccaggccggagtggtacagtggcttgatctcagctcactgcaacctccacctcacaggttcaagtgat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgtgtgccatcacgccagctaatttttataattttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--gtgatccacctgccttggcctccc-aaagtgctg-ggatt-acaggtg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21067788 290 - 78541002 CTAGATC---------tttcttttttttttttttttgagacagagtctcattctgtcacccaggccggagtggtacagtggcttgatctcagctcactgcaacctccacctcacaggttcaagtgat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgtgtgccatcacgccagctaatttttataattttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--gtgatccacctgccttggcctccc-aaagtgctg-ggatt-acaggtg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462204 290 + 26466322 ATAGATC---------tttcttttttttttttttttgagacagagtctcattctgtcacccaggccggagtggtacagtggcttgatctcagctcactgcaacctccacctcacaggttcaagtgat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgtgtgccatcacgccagctaatttttataattttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--gtgatccacctgccttggcctccc-aaagtgctg-ggatt-acaggtg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785283 287 + 43916225 ATAGATC---------tttc---tttttttttttttgagacagagtctcattctgtcacccaggccggagtggtacagtggcttgatctcagctcactgtaacctccacctcacaggttcaagtgat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgtgtgccatcacgccagctaatttttataattttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--gtgatccacctgccttggcctccc-aaagtgctg-ggatt-acaggtg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222534 285 + 75399963 ATAGATC---------tttc-----tttttttttttgagacagagtctcattctgtcacccaggccggagtggtacagtggcttgatctcagctcactgcaacctccacctcacaggttcaagtgat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgtgtgccatcacaccagctaatttttataattttagtagaggtggggtttcaccacgttggtcaggctgttcttgaactcctgacctt--gtgatccacctgccttggcctccc-aaagtgctg-ggatt-acaggtg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779085 290 - 7209941 ATAGATC---------tttcttttttttttttttttgagacagagtctcattctgtcacccaggccggagtagtacagtggcttgatctcagctcactgcaacctccaccttacaggttcaagtgat-tctcctgcctca-gcctcccgagtagctggga-tta-cagg-cgtgtgccatcacgccagctaattcttataattttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--gtgatccacctgccttggcctccc-aaagtgctg-ggatt-acaggtg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523187 284 + 3907144 ATAGAtt---------tttt-----tttttttttttgagacagagtctcattctgtcacccaggccggagtggtacagtggcttgatctcagctcactgcaacctccgcctcacaggttcaagtgat-tctcctgcctca-gcctcctgagtagctggga-tta-cagg-tgtgtgccatcacacaagctaatttctataattttagtagaggtggggtttcaccatgttggtcaggctgttcttgaactcctgacctc--gtga-ccacctaccttggcctccc-aaagtgctg-ggatt-acaggtg i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13702866 242 + 13852661 atagaac---------tttg--------tttgtttagagacagaatctca--ctgtttccctgggcagaggg---ctgtggc----------atcatagcaacctc--------aaactcaagtgatctcttttgcctca-gtctcc-aagtaactggga-tta-ccga-----agcctcaacacctggctattt------------tagagaaggggtctggct---ctactcaggctactcttgaactcctgaactcaagcaatccacccatcttagcctccc-agagtgcta-ggatt-acaggca i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80462618 192 + 88915250 I e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529745 0 - 44557958 C a score=104555.000000 s hg38.chr16_GL383557v1_alt 45635 19 + 89672 tgagccacc-----gtgcctggcc s panTro5.chr16 21471977 19 - 81586097 tgagccacc-----gtgcctggcc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771660 19 + 3010529 tgagccacc-----gtgcctggcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882138 19 + 163208435 tgagccacc-----gtgcctggcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356063 19 - 74971481 tgagccacc-----acacccggcc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068078 19 - 78541002 tgagccacc-----acacccggcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462494 19 + 26466322 tgagtcacc-----acacccggcc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785570 19 + 43916225 tgagccacc-----acacctggcc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222819 19 + 75399963 tgagccacc-----acacccggcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779375 19 - 7209941 tgagccacc-----acacctggcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523471 19 + 3907144 tgagccacc-----acacccagcc i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13703108 19 + 13852661 tgagccacc-----aggcccagcc i otoGar3.GL873566 C 0 I 8 s canFam3.chr5 80462810 24 + 88915250 tgcgccacccagggatcccTGGAC i canFam3.chr5 I 192 C 0 e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I e calJac3.chr20 21529745 0 - 44557958 C a score=-6301.000000 s hg38.chr16_GL383557v1_alt 45654 2 + 89672 GC- s panTro5.chr16 21471996 2 - 81586097 GC- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771679 2 + 3010529 GC- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882157 2 + 163208435 AC- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356082 2 - 74971481 AT- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068097 2 - 78541002 AT- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462513 2 + 26466322 AT- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785589 2 + 43916225 AT- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222838 2 + 75399963 GT- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779394 2 - 7209941 AT- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523490 2 + 3907144 GT- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529745 2 - 44557958 GT- i calJac3.chr20 C 0 C 0 s otoGar3.GL873566 13703135 1 + 13852661 a-- i otoGar3.GL873566 I 8 C 0 s canFam3.chr5 80462834 2 + 88915250 -TT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e aotNan1.NW_018500622v1 9278904 30 - 10531588 I e cebCap1.NW_016107433v1 3318155 33 - 5917169 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=21090.000000 s hg38.chr16_GL383557v1_alt 45656 2 + 89672 AG s panTro5.chr16 21471998 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771681 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882159 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356084 2 - 74971481 AG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068099 2 - 78541002 AG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462515 2 + 26466322 AG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785591 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222840 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779396 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523492 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529747 2 - 44557958 AG i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318188 2 - 5917169 AG i cebCap1.NW_016107433v1 I 33 C 0 s aotNan1.NW_018500622v1 9278934 2 - 10531588 AG i aotNan1.NW_018500622v1 I 30 C 0 s otoGar3.GL873566 13703136 2 + 13852661 ag i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80462836 2 + 88915250 GG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939092 364 + 9850184 I e dasNov3.JH569970 923244 0 + 1009443 C e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=93997.000000 s hg38.chr16_GL383557v1_alt 45658 9 + 89672 ATCTG----ACTT s panTro5.chr16 21472000 9 - 81586097 ATCTG----ACTT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771683 9 + 3010529 ATCTG----ACTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882161 9 + 163208435 ATCTG----ACTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356086 9 - 74971481 ATCTG----ACTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068101 9 - 78541002 ATCTG----ACTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462517 9 + 26466322 ATCTG----ACTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785593 9 + 43916225 ATCTG----ACTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222842 9 + 75399963 ATCTG----ACTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779398 9 - 7209941 ATCTG----ACTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523494 9 + 3907144 ATCTG----ACTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529749 9 - 44557958 ATCTG----ACTT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318190 9 - 5917169 ATCTG----ACTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278936 9 - 10531588 ATCTG----ACTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2939456 9 + 9850184 ATCTG----ACTT i proCoq1.NW_012152729v1 I 364 C 0 s otoGar3.GL873566 13703138 9 + 13852661 ttttg----acct i otoGar3.GL873566 C 0 I 213 s canFam3.chr5 80462838 13 + 88915250 ATTTGTAGATCTT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e dasNov3.JH569970 923244 0 + 1009443 C e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=79552.000000 s hg38.chr16_GL383557v1_alt 45667 7 + 89672 TCTTAGC s panTro5.chr16 21472009 7 - 81586097 TCTTAGC i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771692 7 + 3010529 TCTTAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882170 7 + 163208435 TCTTAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356095 7 - 74971481 TCTTAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068110 7 - 78541002 TCTTAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462526 7 + 26466322 TCTTAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785602 7 + 43916225 TCTTAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222851 7 + 75399963 TCTTAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779407 7 - 7209941 TCTTAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523503 7 + 3907144 TCTTAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529758 7 - 44557958 TCTTAGC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318199 7 - 5917169 TCTTAGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278945 7 - 10531588 TCTTAGC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2939465 7 + 9850184 TCTTAGC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13703360 7 + 13852661 CCATAGC i otoGar3.GL873566 I 213 C 0 s canFam3.chr5 80462851 7 + 88915250 TCTCATC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e dasNov3.JH569970 923244 0 + 1009443 C e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=1231131.000000 s hg38.chr16_GL383557v1_alt 45674 125 + 89672 CTGGAGGCCATGGCCTTTTGTTGGGGCAAGTGTACGTGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTTTCCCT s panTro5.chr16 21472016 123 - 81586097 CTGGAGGCCATGGCCTTTTGTTGGGGCAAGTGTACGTGGGCATTCCC--AAATTGTAT-GCAAAATTTGGTCTCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTT--CCT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771699 125 + 3010529 CTGGAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTTTCCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882177 125 + 163208435 CTGGAGGCCGTGGCCTTTTGTTGGGGCAAGTGTACATGGGCattcccaaaaattgtat-gcaaaatttgg--tctctaaggtatttttttgaagcctgtga--ttcatccaattgtcaggaagtttccct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356102 125 - 74971481 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGACAGGAAGTTTCCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068117 125 - 78541002 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGTATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGACAGGAAGTTTCCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462533 125 + 26466322 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGACAGGAAGTTTCCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785609 125 + 43916225 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTTTCCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222858 125 + 75399963 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTTTCCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779414 125 - 7209941 CTGCAGGCCATGGTCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTTTCCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523510 125 + 3907144 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGGGCATTCCCAAAAATTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGTTTCCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529765 124 - 44557958 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGCACATTCCCAAAAACTGTAT-GCAAAATTTGG--TCTCTAAGGT-TATTTTTGAAGCCTGTGA--TTCATCCAATTGGCAGGAAGGTGCCAT i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318206 125 - 5917169 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGCGCATTCCCAAAAACTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCAACCAATTGGCAGGAAGGTGCCAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9278952 125 - 10531588 CTGCAGGCCATGGCCTTTTGTTGGGGCAAGTGTACATGCACATTCCCAAAAACTGTAT-GCAAAATTTGG--TCTCTAAGGTATTTTTTTGAAGCCTGTGA--TTCATCCAGTTGGCAGGAAGGTGCCAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2939472 125 + 9850184 CTGGAGGCCATGGCCTTGTGTTAGGGCAAATGGAGATGGATATCCCCAGAAATTGTATGGAAAAATTCAG--TCTCTAAGGTA-ATTTTTGGAGCCTGTAACTTTCATCCAATTGAGAC--AGGTCCCAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13703367 126 + 13852661 CTGGAGGCCATAGCCTTTTGTTGGGGAAAGTATTGATGGGCATCTCCAGAAATTATAT-AAAAAATTCAA--TCTCTAAGGTA-ATTTTTGGAGTCTATGACTTTCATCTAATTTATACAGAGGCCTCAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80462858 61 + 88915250 CTGGAGGTCATGGCCTGCTGTTGGGGCAAATGCTGAGGGGTATCCCCAGAAATCATAT-GCA-------------------------------------------------------------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923244 103 + 1009443 CTGGGGGCCATTGCCTTTTGTTGGGGCAAGTGTAAATG-GCATTCCCAGAAACTGTAT-ACAAAAATTGG-------------------TAATGGCT------TTTATTCAATTTGCAGAGCGATCCCAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54929771 494 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=674072.000000 s hg38.chr16_GL383557v1_alt 45799 55 + 89672 GACCAAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA s panTro5.chr16 21472139 55 - 81586097 GACC-AAGGCCATGAGCCACTGCTGTGCACATATGCAGAGCCTGCAGTGGCTTTTA i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771824 55 + 3010529 GACCAAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882302 55 + 163208435 gaccaaaggccatgagccactgCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356227 55 - 74971481 GACCAAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068242 55 - 78541002 GACCAAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462658 55 + 26466322 GACCAAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785734 55 + 43916225 GACCAAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58222983 55 + 75399963 GACCAAAGGCCATGAGCCACTGCTGTGTACAT-TGCAGAGCCTGCAGTGGCTTTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779539 55 - 7209941 GACCCAAGGCCATGAGCCACTGCTGTGCACAT-TGCAGAGCCTGCAGTGGCTTTTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523635 55 + 3907144 GACCAAAGGCCATGAGCCACTGCTGTGCACAC-TGCAGAGCCTGCAGTGGCTTTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529889 55 - 44557958 GACCAAAGGCCATGAGCCACTGCTATGCACAC-TACAGAGCCTGGAGTGGCTGTAA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318331 55 - 5917169 GACCAAAGGCCATAAGCCACTGCTGTGCACAC-TGCAGAGCCTGGAGTGGCTGTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279077 55 - 10531588 GACCAAAGGCCATGAGCCACTGCTGTGCACAC-GGCAGAGCCTGGAGTGGCTGTAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54930265 55 + 72247402 GACCGAAGGCCATGAGCCACTACTGTGCACAC-TACAGAGCCTGCAATGGCTTTTA i micMur3.chr20 I 494 I 232 s proCoq1.NW_012152729v1 2939597 55 + 9850184 GACCAAAGGCCATGAGCCACAGCTGTACACAC-TGCAGAGCCTGCAATGGCTTTTA i proCoq1.NW_012152729v1 C 0 I 233 s otoGar3.GL873566 13703493 43 + 13852661 GACCAAAGGC------------CTGTGCACAC-TGCAGAGTCTGCAATGGCTTTTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80462919 26 + 88915250 -----------------------------CAC-CACAGAACCTGTGGTGGCTTCTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923347 55 + 1009443 GACCAAAGGCCCTGAACCACTGCTGTACATAC-TGCAGAGCCTGCAACAACTTTTA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22467033 926 - 129401213 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=18721.000000 s hg38.chr16_GL383557v1_alt 45854 2 + 89672 TT s panTro5.chr16 21472194 2 - 81586097 TC i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771879 2 + 3010529 TC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882357 2 + 163208435 TC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356282 2 - 74971481 TC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068297 2 - 78541002 TC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462713 2 + 26466322 TC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785789 2 + 43916225 TC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58223038 2 + 75399963 TC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6779594 2 - 7209941 TC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523690 2 + 3907144 TC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529944 2 - 44557958 TC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318386 2 - 5917169 TC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279132 2 - 10531588 TC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13703536 2 + 13852661 TT i otoGar3.GL873566 C 0 M 971 s canFam3.chr5 80462945 2 + 88915250 TC i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 923402 2 + 1009443 TG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I a score=1797745.000000 s hg38.chr16_GL383557v1_alt 45856 224 + 89672 --CAGACATGAATGATACAACCCACCCACCTCCTCCAGCTTCATGGACTAGAAGagctaagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccataggaaggaggcagag---acaac-----tcaggactaccagcctctggatccagggttattttcactatacAGTACCCTTCAGACCTCAAAAATAAGGGTCCAAgctg-------ggcacagtggctca s panTro5.chr16 21472196 221 - 81586097 --CAGACATGAATGATACAAACCCACCACCTCCTCCAGCTTCATGGACTAGAAGAGCTAAGAGAACTGAGGGGccagagag-------ccaaaga-caaagaccatggcccaaagtccatagGAAGGAGGCAGAG---ACAAC-----TCAGGACTACCAGCCTCTGGAT-CAGGGCGATTTTCACTATACAGTACCCTTCAGACCTCAAAAATAA-GGTCCAAgctg-------ggcacagt-gctca i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 771881 224 + 3010529 --CAGACATGAATGATACAACCCACCCACCTCCTCCAGCTTCATGGACTAGAAGagctaagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccataggaaggaggcagag---acaac-----tcaggactaccagcctctggatccagggctattttcactatacAGTACCCTTCAGACCTCAAAAATAAGGGTCCAAgctg-------ggcacagtggctca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882359 217 + 163208435 --CAGACATGAATGATACAACCCACCCACCTCCTCCAGTTTCATGGACTAGAAGagctaagaaaactga-gggccagagag-------c-------caaagaccatggcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctgcatccagggctattttcactatacAGTACCCTTCAGACCTCCAAAATAAGGGTCCAAgctg-------ggcacagtggctca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356284 224 - 74971481 --CAGACAGGAGTGATACAATCTACCCACCTCCTCTAGCTTCATGGACTAGAAGACCtgagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattttcactatacAGTACCCCTCAGACCTCAAAAATAAGGGTCCAggctg-------ggcacagtggctca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068299 224 - 78541002 --CAGACAGGAGTGATACAATCTACCCACCTCCTCTAGCTTCATGGACTAGAAGACCtgagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattttcactatacAGTACCCCTCAGACCTCAAAAATAAGGGTCCAggctg-------ggcacagtggctca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462715 224 + 26466322 --CAGACAGGAGTGATACAATCTACCCACCTCCTCTAGCTTCATGGACTAGAAGACCtgagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattttcactatacAGTACCCCTCAGACCTCAAAAATAAGGGTCCAggctg-------ggcacagtggctca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20785791 224 + 43916225 --CAGACAGGAGTGATACAATCTACCCACCTCCTCTAGCTTCATGGACTAGAAGACCtgagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattgtcactatacAGTACCCCTCAGACCTCAAAAATAAGGGTCCAggctg-------ggcacagtggctca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58223040 224 + 75399963 --CAGACAGGAGTGATACAATCTACCCACCTCCTCCAGCTTCATGGACTAGAAGACCtgagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattttcgctatacAGTACCCCTCAGACCTCAAAAATAAGGGTCCAGGCTG-------GGCACAGTGGCTCA i chlSab2.chr5 C 0 I 4671 s manLeu1.NW_012101698v1 6779596 224 - 7209941 --CAGACAGGAGTGATACAATCTACCCACCTCCTCTAGCTTCATGGAGTAGAAGACCtgagaaaactga-gggccagagag-------ccaaagaccaaagaccatggcccagagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattgtcactatacAGTACCCCTCAGACCTCAAAAATAAGGGTCCAggctg-------ggcacagtggctca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523692 231 + 3907144 --CAGACAGGAGTGATACAATCTACCCACCTCCTCCAGCTTCATGGACTAGAAGACCTGTGAAAACTGA-GGGCCAGAGAGCCAAAGACCAAAGACCAAAGACCATGgcccaaagtccacaggaaggaggcagag---acaac-----tcaggactcccagcctctggatccagggctattttcactatacAGTACCCCTCATACCTCAAAAATAAGGGTCCAAgctg-------ggcacagtggctca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21529946 220 - 44557958 --CAGATACAAGTGATGCAATCCACCCAGCTCTTCCAGCTTCATGGAtt---agaactgagaaaactga-gggccagagag-------ccaaagatgagagaccacagcccaaagtctacaggaaggaggcagag---acaac-----ttaggactcccagcctccagatccagggctattttcactatacAGTACCCCTCAAACTTCGAAAATAT-GGTCCAAGTTg-------ggcacagtggctca i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318388 223 - 5917169 --CAGATATGAGTGATGCAATCCACCCAGCTCTTCCAGCTTCATGGACTAGAAGAACtgagaaaactga-gggccagagag-------ccaaagaccagagaccacagcccaaagtccacaggaaagaggcagag---acaac-----ttaggactcccagcctccagatccagggctattttcactatacAGTACCCCTCAAACTTCAAAAATAA-GGTCCAAGTTg-------ggcacagtggctca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279134 176 - 10531588 --CAGACACGAGTGATGCAACCCAC------------------------------------------------CCAGAGAG-------CCAAAGACCAGAGACCACAgcccaaagtccacaggaaggaggcagag---acaac-----ttaggactcccagcctccagatccagggctattttcactctacagtaccccTCAAACTTCAAAAATAA-GGTCCAAgctg-------ggcacagtggctca i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80462949 211 + 88915250 --AAGGCATGAGTGTTGCAATCCACCCA---CTTCCAGCTTCATGGGCTGGGAGagctgaggaaactga-ggcccagacta-------ccaaaga-----gtctat--cctaaagtccacaatgaggaaggaaaa---a-aac-----tcaggtcttccagcctcctggtctagggct----ttACTATACA-----CTCCAGACCTCAAAAATGAGGATCCggggtgcctgggtggctcagtggttga i canFam3.chr5 I 2 I 5 s dasNov3.JH569970 923404 197 + 1009443 TAAAGACGTGA-Tgaaataatctgcccacttcttccagcttcacgga-----aaagctgaggaaactga-gg----------------cccaaagccaaaggccccagcccaaagtccatggtgaggaagcagagtccacaactcccttcagaccccctggcctcctaattcagtgct--tttcactA------ATATCTCAGACCTCAAAACT---------------------Gagaaagtggatta i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e panPan2.chr16 21538512 1430 - 90481686 M e saiBol1.JH378225 6335194 1601 + 6628207 I e otoGar3.GL873566 13703538 971 + 13852661 M a score=123286.000000 s hg38.chr16_GL383557v1_alt 46080 21 + 89672 tgcct------------ataatcccaaaacttt s panTro5.chr16 21472417 21 - 81586097 tgcct------------ataatcccaaaacttt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772105 21 + 3010529 tgcct------------ataatcccaaaacttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882576 21 + 163208435 cgcct------------gtaatcccaaaacttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356508 21 - 74971481 tgcct------------ataatcccaaaacttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068523 21 - 78541002 tgcct------------ataatcccaaaacttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462939 20 + 26466322 tgcct------------at-atcccaaaacttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786015 21 + 43916225 tgcct------------ataatcccaaaacttt i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779820 21 - 7209941 tgcct------------ataatcccaaaacttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523923 21 + 3907144 tgcct------------ataatcccaaaacttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530166 21 - 44557958 cgcct------------gtaatctcaacacttt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318611 21 - 5917169 cgcct------------ataatctcaatacttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279310 21 - 10531588 cgcct------------gtaatcccaacacttt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80463165 33 + 88915250 tgcctttggctcgggtcatgatcccagaatcct i canFam3.chr5 I 5 C 0 s dasNov3.JH569970 923601 8 + 1009443 -------------------------ggagctgg i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e panPan2.chr16 21538512 1430 - 90481686 M e chlSab2.chr5 58223264 4671 + 75399963 I e saiBol1.JH378225 6335194 1601 + 6628207 I e otoGar3.GL873566 13703538 971 + 13852661 M a score=43125.000000 s hg38.chr16_GL383557v1_alt 46101 4 + 89672 ggga s panTro5.chr16 21472438 4 - 81586097 ggag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772126 4 + 3010529 ggga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882597 4 + 163208435 ggga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356529 4 - 74971481 ggga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068544 4 - 78541002 ggga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462959 4 + 26466322 ggga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786036 4 + 43916225 ggga i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779841 4 - 7209941 ggga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523944 4 + 3907144 ggga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530187 4 - 44557958 ggga i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318632 4 - 5917169 ggga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279331 4 - 10531588 ggga i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704523 4 + 13852661 ggga i otoGar3.GL873566 M 971 C 0 s canFam3.chr5 80463198 4 + 88915250 ggga i canFam3.chr5 C 0 I 73 s dasNov3.JH569970 923609 4 + 1009443 ggga i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e panPan2.chr16 21538512 1430 - 90481686 M e chlSab2.chr5 58223264 4671 + 75399963 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=240358.000000 s hg38.chr16_GL383557v1_alt 46105 40 + 89672 gggtgaggcaagcagatcatttgaggtcaggagttcaaga s panTro5.chr16 21472442 39 - 81586097 gagtgaggcaagcagatcatttga-gtcaggagttcaaga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772130 40 + 3010529 gggtgaggcaagcagatcatttgaggtcaggagttcaaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882601 40 + 163208435 gggtgaggcaagcagatcatttgaggtcaggagttcaaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356533 40 - 74971481 gggtgaggcaagcagatcatttgaggtcaagagttcgaga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068548 40 - 78541002 gggtgaggcaagcagatcatttgaggtcaagagttcgaga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14462963 40 + 26466322 gggtgaggcaagcagatcatttgaggtcaagagttcgaga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786040 40 + 43916225 gggtgaggcaagcagatcatttgaggtcaagagttcgaga i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779845 40 - 7209941 gggtgaggcaagcagatcatttgaggtcaagagttcgaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523948 40 + 3907144 gggtgaggcaagcagatcatttgaggtcaggagttcgaga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530191 40 - 44557958 ggctatggctgccagatcatttgaggtcaggagtctgaga i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3318636 40 - 5917169 ggctatggctggcagatcgtttgaggtcaggagtctgaga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279335 40 - 10531588 ggctatggctggcagatcgtttgaggtcaggagtctgaga i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704527 40 + 13852661 ggccgaagtgggtggattgcctgagctcacaggtttaaga i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 923613 12 + 1009443 ggagaaggggaa---------------------------- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e panPan2.chr16 21538512 1430 - 90481686 M e chlSab2.chr5 58223264 4671 + 75399963 I e saiBol1.JH378225 6335194 1601 + 6628207 I a score=82110.000000 s hg38.chr16_GL383557v1_alt 46145 8 + 89672 ccagcctg s panTro5.chr16 21472481 8 - 81586097 ccagcctg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772170 8 + 3010529 ccagcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882641 8 + 163208435 ccagcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356573 8 - 74971481 ccagcctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068588 8 - 78541002 ccagcctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14463003 8 + 26466322 ccagcctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786080 8 + 43916225 ccagcctg i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779885 8 - 7209941 ccagcctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 523988 8 + 3907144 ccagcctg i colAng1.NW_012123265v1 C 0 M 590 s calJac3.chr20 21530231 8 - 44557958 ccagcctg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6336795 8 + 6628207 ccagcctg i saiBol1.JH378225 I 1601 C 0 s cebCap1.NW_016107433v1 3318676 8 - 5917169 ccagcctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279375 8 - 10531588 ccagcctg i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704567 8 + 13852661 ccagcctg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923625 0 + 1009443 C e panPan2.chr16 21538512 1430 - 90481686 M e chlSab2.chr5 58223264 4671 + 75399963 I a score=75001.000000 s hg38.chr16_GL383557v1_alt 46153 13 + 89672 accaacatg-gtga s panTro5.chr16 21472489 13 - 81586097 accaacatg-gtga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772178 12 + 3010529 accaacatg-gtg- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882649 13 + 163208435 atcaacatg-gtga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356581 13 - 74971481 accaacatg-gtga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068596 13 - 78541002 accaacatg-gtga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14463011 13 + 26466322 accaacatg-gtga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786088 13 + 43916225 accaacatg-gtga i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779893 13 - 7209941 accaacatg-gtga i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21530239 13 - 44557958 accaacatg-gtga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6336803 14 + 6628207 ggttacaagagcga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318684 13 - 5917169 accaacatg-gtga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279383 13 - 10531588 accaacatg-gtga i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704575 11 + 13852661 --agccaga-gcga i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 923625 7 + 1009443 ------atg-gtga i dasNov3.JH569970 C 0 I 147 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e chlSab2.chr5 58223264 4671 + 75399963 I a score=97843.000000 s hg38.chr16_GL383557v1_alt 46166 23 + 89672 aaccccatctc----------------tact-aaaa--ata-c s panTro5.chr16 21472502 24 - 81586097 aaccccatctc----------------tact-aaaa--atacc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772190 23 + 3010529 aaccccatctc----------------tact-aaaa--ata-c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882662 23 + 163208435 aaccccatctc----------------tact-aaaa--ata-c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356594 23 - 74971481 aaccccatctc----------------tact-aaaa--ata-c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068609 23 - 78541002 aaccccatctc----------------tact-aaaa--ata-c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14463024 24 + 26466322 aaccccatctc----------------tactaaaaa--aaa-a i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786101 23 + 43916225 aaccccatctc----------------tact-aaaa--ata-c i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779906 23 - 7209941 aaccccatctc----------------tact-aaaa--ata-c i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21530252 23 - 44557958 aactctgtctc----------------tact-aaaa--ata-c i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6336817 39 + 6628207 aactccgtctcaaaacaaaacaaaacaaaac-aaaa--aca-a i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318697 25 - 5917169 aaccccgcgtc----------------tact-aaaattaca-a i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279396 23 - 10531588 aaccccatctc----------------tact-aaaa--ata-a i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704586 13 + 13852661 gacctcatctc----------------ta-------------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e mm10.chr8 22467033 926 - 129401213 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e chlSab2.chr5 58223264 4671 + 75399963 I a score=37982.000000 s hg38.chr16_GL383557v1_alt 46189 6 + 89672 aaaaaa s panTro5.chr16 21472526 6 - 81586097 aaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772213 4 + 3010529 --aaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882685 5 + 163208435 -aaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356617 6 - 74971481 aaaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068632 6 - 78541002 aaaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14463048 6 + 26466322 aaaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20786124 6 + 43916225 aaaaaa i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6779929 6 - 7209941 aaaaaA i manLeu1.NW_012101698v1 C 0 T 7235 s calJac3.chr20 21530275 6 - 44557958 aaaaaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6336856 6 + 6628207 aaacaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318722 6 - 5917169 aaaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279419 6 - 10531588 aagtaa i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22467959 6 - 129401213 aaaaaa i mm10.chr8 I 926 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e chlSab2.chr5 58223264 4671 + 75399963 I e otoGar3.GL873566 13704599 0 + 13852661 C a score=32707.000000 s hg38.chr16_GL383557v1_alt 46195 9 + 89672 aaaaaaaaa s panTro5.chr16 21472532 9 - 81586097 aaaaaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772217 9 + 3010529 aaaaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882690 9 + 163208435 acaaacaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356623 9 - 74971481 aaaaaaaaa i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21068638 9 - 78541002 aaaaaaaaa i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14463054 9 + 26466322 aaaaaaaaa i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20786130 9 + 43916225 aaaaaaaaa i cerAty1.NW_011999143v1 C 0 I 2138 s calJac3.chr20 21530281 4 - 44557958 aa-----aa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6336862 9 + 6628207 aacaaacaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318728 9 - 5917169 aaaaaaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279425 4 - 10531588 aa-----aa i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22467965 9 - 129401213 aaaaaaaaa i mm10.chr8 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e otoGar3.GL873566 13704599 0 + 13852661 C a score=136882.000000 s hg38.chr16_GL383557v1_alt 46204 26 + 89672 aaaaattagccaggt-g-tggtggtaca s panTro5.chr16 21472541 27 - 81586097 aaaaattagccaggt-gttggtggtaca i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772226 26 + 3010529 aaaaattagccaggt-g-tggtggtaca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882699 26 + 163208435 aaaaattagccgggt-g-tggtggtaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356633 26 - 74971481 aaaaattagctgggt-g-tggtggtgca i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21068648 26 - 78541002 aaaaattagctgggt-g-tggtggtgca i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14463064 26 + 26466322 aaaaattagctgggt-g-tggtggtgca i macNem1.NW_012011355v1 I 1 C 0 s calJac3.chr20 21530285 26 - 44557958 aaaaattagccatgt-g-tggtggtgcA i calJac3.chr20 C 0 I 10 s saiBol1.JH378225 6336871 26 + 6628207 aaaaattagccaggt-g-tggtggtgca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318737 26 - 5917169 aaaaattagccaggt-g-tggtggtgca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279429 26 - 10531588 aaaaattagccaggt-g-tggtggtgca i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704599 24 + 13852661 --aaaatagccgagc-a-ctgtggtggg i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22467974 27 - 129401213 aaaaaGTCgctgggcag-cagtggcaca i mm10.chr8 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I a score=333126.000000 s hg38.chr16_GL383557v1_alt 46230 103 + 89672 cacccct-atctcagctactcaggagaatgaggcacaagaatctcttgaacccaggaggcaaaggttgcagtgagccgagatcgca----ccgctgcactacagcct-g s panTro5.chr16 21472568 102 - 81586097 cacccct-atctcagctactcaggagaatgaggcacaagaatctcttgaacccaggaggcaaaggttgca-tgagccgagatcgca----ccactgcactacagcct-g i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772252 103 + 3010529 cacccct-atctcagctactcaggaggatgaggcacaagaatctcttgaacccaggaggcaaaggttgcagtgagccgagatcgca----ccactgcactacagcct-g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882725 103 + 163208435 cacccct-atctcagctactcaggaggatgaggcacaagaatctcttgaacccaagaggcaaaggttgcagtgagccaagatcgca----ccactgcactacagcct-g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356659 101 - 74971481 tactcc--atctcagctactcaggaggatgaggcaggaaaatcacttgaacccaggaggcaaaggttgcagtgagccaagagcgca----ccactgcactccagcct-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068674 101 - 78541002 tactcc--atctcagctactcaggaggatgaggcaggaaaatcacttgaacccaggaggcaaaggttgcagtgagccaagagcgca----ccactgcactccagcct-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14463090 102 + 26466322 tactcc--atctcagcttctcaggaggatgaggcaggaaaatcacttgaacccaggaggcaaaggttgcagtgagccaagagcgca----ccactgcactccagcctg- i macNem1.NW_012011355v1 C 0 I 4219 s saiBol1.JH378225 6336897 98 + 6628207 tgcctgtaatttcagctactcgggaggctgaggc------atcccttgaacctaggaggcggaggttgtggtgagccaagatcaca----tcactgcactccagcct-g i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318763 98 - 5917169 tgcttgtaatttcagctactcgggaggctgaggc------atcacttgaacctaggaggcggaggttgtggtgaaccaggatcaca----ccactgcactccagcct-g i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279455 98 - 10531588 tgcctgtaatttcagctactccggaggctgaggc------accacttgaacctaggaggcagaggttgtggtgagccaacatcata----ccactgcactccagcct-g i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704623 97 + 13852661 cgcctgtcatcccagctacttgggaggctgaggcaagagaattgcttaaaccc--gagttggaaattgctgtgagccatga---cg----ccatggcattcta--ct-g i otoGar3.GL873566 C 0 I 2 s mm10.chr8 22468001 92 - 129401213 tgcctttaatcccagc-acttaggaggcagaggcaggcgaatttct---------------gagttcgaggccagcctggtcctcagagtgagttccaggacagcca-g i mm10.chr8 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=43019.000000 s hg38.chr16_GL383557v1_alt 46333 16 + 89672 ggcgacagagcaagag s panTro5.chr16 21472670 16 - 81586097 ggcgacagagcaagag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772355 16 + 3010529 ggcgacagagcaagag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882828 16 + 163208435 ggcgacagagcaagag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356760 9 - 74971481 -------gagcaagac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068775 9 - 78541002 -------gagcaagac i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6336995 16 + 6628207 ggtgacagagtaagac i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318861 16 - 5917169 ggtgacagagtaagac i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279553 16 - 10531588 ggtgacagagtaagac i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704722 16 + 13852661 ggctacaaagctagac i otoGar3.GL873566 I 2 C 0 s mm10.chr8 22468093 16 - 129401213 ggcaatacagagaaac i mm10.chr8 C 0 C 0 e canFam3.chr5 80463202 73 + 88915250 I e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e macNem1.NW_012011355v1 14463192 4219 + 26466322 I e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=4664.000000 s hg38.chr16_GL383557v1_alt 46349 1 + 89672 t s panTro5.chr16 21472686 1 - 81586097 t i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772371 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882844 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356769 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068784 1 - 78541002 t i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6337011 1 + 6628207 t i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318877 1 - 5917169 t i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279569 1 - 10531588 t i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704738 1 + 13852661 t i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468109 1 - 129401213 c i mm10.chr8 C 0 C 0 s canFam3.chr5 80463275 1 + 88915250 t i canFam3.chr5 I 73 C 0 e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e macNem1.NW_012011355v1 14463192 4219 + 26466322 I e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=30437.000000 s hg38.chr16_GL383557v1_alt 46350 6 + 89672 ttgtct-- s panTro5.chr16 21472687 6 - 81586097 ttgtct-- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772372 6 + 3010529 ttgtct-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882845 6 + 163208435 ttgtct-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356770 6 - 74971481 ttgtct-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068785 6 - 78541002 ttgtct-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999006 6 - 26466322 TTGTCT-- i macNem1.NW_012011355v1 T 26287 C 0 s saiBol1.JH378225 6337012 6 + 6628207 ttgtct-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318878 6 - 5917169 ttgtct-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279570 6 - 10531588 ttgtct-- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704739 6 + 13852661 ctgtct-- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468110 6 - 129401213 ctgtct-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80463276 6 + 88915250 --ctctca i canFam3.chr5 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e panPan2.chr16 21538512 1430 - 90481686 M e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=-38118.000000 s hg38.chr16_GL383557v1_alt 46356 3 + 89672 c-----------------------aa s panTro5.chr16 21472693 26 - 81586097 caaaaaaaaaaaaaaaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21539942 3 - 90481686 -----------------------Caa i panPan2.chr16 M 1430 C 0 s gorGor5.CYUI01000018v1 772378 7 + 3010529 -------------------caaacaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882851 9 + 163208435 -----------------caaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356776 12 - 74971481 --------------caaaaaaaaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068791 12 - 78541002 --------------caaaaaaaaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999012 9 - 26466322 --------------C---aaaaaaaa i macNem1.NW_012011355v1 C 0 C 0 s saiBol1.JH378225 6337018 2 + 6628207 ------------------------ca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318884 2 - 5917169 ------------------------ca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279576 2 - 10531588 ------------------------ca i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704745 3 + 13852661 -----------------------aaa i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468116 5 - 129401213 ---------------------cgaaa i mm10.chr8 C 0 C 0 s canFam3.chr5 80463282 2 + 88915250 ------------------------tg i canFam3.chr5 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e dasNov3.JH569970 923632 147 + 1009443 I e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=43912.000000 s hg38.chr16_GL383557v1_alt 46359 12 + 89672 aaaaaaaaaaaa s panTro5.chr16 21472719 12 - 81586097 aaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21539945 12 - 90481686 aaaaaaaaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772385 12 + 3010529 acaaacaaaaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882860 12 + 163208435 taaaaataaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356788 12 - 74971481 aaaaaagtaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068803 12 - 78541002 aaaaaagtaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999021 12 - 26466322 aaaaaagtaaaa i macNem1.NW_012011355v1 C 0 C 0 s saiBol1.JH378225 6337020 10 + 6628207 acaaaataaa-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318886 12 - 5917169 acaaaataaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279578 12 - 10531588 acaaaataaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13704748 12 + 13852661 aaaaaaaaaaaa i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468121 12 - 129401213 aaccaGGAaaaa i mm10.chr8 C 0 C 0 s canFam3.chr5 80463284 12 + 88915250 aataaataaaac i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 923779 12 + 1009443 atggaatgaatg i dasNov3.JH569970 I 147 C 0 e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=36787.000000 s hg38.chr16_GL383557v1_alt 46371 23 + 89672 ttaaa--aaaataaaaaaTAAACTA s panTro5.chr16 21472731 23 - 81586097 ttaaa--aaaattaaaaataaaCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21539957 20 - 90481686 ttaaa--aa---taaaaataaacta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772397 21 + 3010529 ttaaa--aaa--taaaaaTAAACTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882872 23 + 163208435 taaaa--aaaattaaaaataaaCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356800 23 - 74971481 ttaaa--aaaCTAAAAAATAAACTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21068815 23 - 78541002 ttaaa--aaaCTAAAAAATAAACTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999033 21 - 26466322 ttaaa--aact--aaaaataaacta i macNem1.NW_012011355v1 C 0 C 0 s saiBol1.JH378225 6337030 10 + 6628207 --------aattaaaaaa------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318898 18 - 5917169 t-------aattaaaaaataaaCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279590 18 - 10531588 t-------aaataaaaaataaaCTA i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22468133 23 - 129401213 -caaaacaaaacaaaaaaaaaACC- i mm10.chr8 C 0 C 0 s canFam3.chr5 80463297 16 + 88915250 ttaaa--aaaaaaAAAAA------- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 923791 23 + 1009443 ttacc--acagtaataaaTAAAACA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54930320 232 + 72247402 I e proCoq1.NW_012152729v1 2939652 233 + 9850184 I e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13704760 0 + 13852661 C a score=107421.000000 s hg38.chr16_GL383557v1_alt 46394 22 + 89672 AGGGTCCAGAAAGCACACTGTT s panTro5.chr16 21472754 22 - 81586097 AGGGTCCAGAAAGCACACTGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21539977 22 - 90481686 aGGGTCCAGAAAGCACACTGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772418 22 + 3010529 AGGGTCCAGAAAGCACACTGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882895 22 + 163208435 AGAGTCCAGAAAGCACACTGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21356823 22 - 74971481 AGGGTCCAGAAAGCACACTGTT i rheMac8.chr20 C 0 I 323 s macFas5.chr20 21068838 22 - 78541002 AGGGTCCAGAAAGCACACTGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999054 22 - 26466322 aGGGTCCAGAAAGCACACTGTT i macNem1.NW_012011355v1 C 0 C 0 s saiBol1.JH378225 6337040 13 + 6628207 ---------aaaGCACACCATT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318916 22 - 5917169 AGAGTCCAGAAAGCACACCATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279608 22 - 10531588 AGAGTCCAGAAAGCACACCATT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54930552 22 + 72247402 AGGGTCCAGAAACCACACTGCA i micMur3.chr20 I 232 C 0 s proCoq1.NW_012152729v1 2939885 22 + 9850184 AGGGTCCAGAAACCACACTGCA i proCoq1.NW_012152729v1 I 233 C 0 s mm10.chr8 22468156 10 - 129401213 -----CCACAAGGCT------- i mm10.chr8 C 0 C 0 s dasNov3.JH569970 923814 1 + 1009443 ---G------------------ i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80463313 0 + 88915250 C e colAng1.NW_012123265v1 523996 590 + 3907144 M e manLeu1.NW_012101698v1 6779935 7235 - 7209941 T e chlSab2.chr5 58223264 4671 + 75399963 I e cerAty1.NW_011999143v1 20786139 2138 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13704760 0 + 13852661 C a score=19655.000000 s hg38.chr16_GL383557v1_alt 46416 2 + 89672 AA s panTro5.chr16 21472776 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21539999 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772440 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882917 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357168 2 - 74971481 aa i rheMac8.chr20 I 323 C 0 s macFas5.chr20 21068860 2 - 78541002 AA i macFas5.chr20 C 0 I 323 s macNem1.NW_012011355v1 11999076 2 - 26466322 AA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788277 2 + 43916225 aa i cerAty1.NW_011999143v1 I 2138 C 0 s manLeu1.NW_012101698v1 6772700 2 - 7209941 aa i manLeu1.NW_012101698v1 T 7235 C 0 s colAng1.NW_012123265v1 524595 2 + 3907144 AA i colAng1.NW_012123265v1 M 590 C 0 s saiBol1.JH378225 6337053 2 + 6628207 AA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318938 2 - 5917169 AA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279630 2 - 10531588 AA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54930574 2 + 72247402 GA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2939907 2 + 9850184 GA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22468166 2 - 129401213 GA i mm10.chr8 C 0 C 0 e canFam3.chr5 80463313 0 + 88915250 C e dasNov3.JH569970 923815 0 + 1009443 C e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13704760 0 + 13852661 C a score=25976.000000 s hg38.chr16_GL383557v1_alt 46418 2 + 89672 GA s panTro5.chr16 21472778 2 - 81586097 GA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540001 2 - 90481686 GA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772442 2 + 3010529 GA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882919 2 + 163208435 GA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357170 2 - 74971481 GA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21069185 2 - 78541002 GA i macFas5.chr20 I 323 C 0 s macNem1.NW_012011355v1 11999078 2 - 26466322 GA i macNem1.NW_012011355v1 C 0 I 314 s cerAty1.NW_011999143v1 20788279 2 + 43916225 ga i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6772702 2 - 7209941 GA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 524597 2 + 3907144 GA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337055 2 + 6628207 GA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318940 2 - 5917169 GA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279632 2 - 10531588 GA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54930576 2 + 72247402 GA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2939909 2 + 9850184 GA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22468168 2 - 129401213 GA i mm10.chr8 C 0 C 0 e canFam3.chr5 80463313 0 + 88915250 C e dasNov3.JH569970 923815 0 + 1009443 C e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13704760 0 + 13852661 C a score=389593.000000 s hg38.chr16_GL383557v1_alt 46420 35 + 89672 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG s panTro5.chr16 21472780 35 - 81586097 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i panTro5.chr16 C 0 I 8772 s panPan2.chr16 21540003 35 - 90481686 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772444 35 + 3010529 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882921 35 + 163208435 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357172 35 - 74971481 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21069187 35 - 78541002 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999394 35 - 26466322 aaGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i macNem1.NW_012011355v1 I 314 C 0 s cerAty1.NW_011999143v1 20788281 35 + 43916225 aaGCAAGTGCTCAGCAAAATCATGAGGTCAAGGTG i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6772704 35 - 7209941 AAGCAAGTGCTCAGCAAAATCAAGAGGTCAAGGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 524599 35 + 3907144 AAGCAAGTGCTCAGCAAAATCATGAGGTCAAGATG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337057 35 + 6628207 AAGCAAGCTCCCAGCAAAATCATGAGGTCAAGGTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318942 35 - 5917169 AAGCAAGCTCTCAGCAAAATCATGAGGTCAAAGTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279634 35 - 10531588 AAGCAAGCTCTCAGCAGAATCATGAGGTCAAGGTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54930578 35 + 72247402 AAGCAAGCTCTCAGCAAACTCATGAGGTCACGGTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2939911 35 + 9850184 AAGCAAGCTCTCAGCAAAATCATGAGGTGGAGGCG i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22468170 31 - 129401213 CGGTAAGTCCTCAGCAAAATCATTAGGACCA---- i mm10.chr8 C 0 C 0 s canFam3.chr5 80463313 5 + 88915250 -------------------ACATG----------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923815 30 + 1009443 -----AGCTCTCAGCAAAAACATGAGGTCAAGGTG i dasNov3.JH569970 C 0 C 0 e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13704760 0 + 13852661 C a score=310517.000000 s hg38.chr16_GL383557v1_alt 46455 34 + 89672 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA s panTro5.chr16 21481587 34 - 81586097 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i panTro5.chr16 I 8772 C 0 s panPan2.chr16 21540038 34 - 90481686 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772479 34 + 3010529 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882956 34 + 163208435 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357207 34 - 74971481 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21069222 34 - 78541002 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 11999429 33 - 26466322 TCCTCTAACTTTTCTTCAGCAGTAGTAGC-AAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788316 34 + 43916225 TCCTCTAACTTTTCTTCAGCAGTAGTAGAAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6772739 34 - 7209941 TCCTCTAACTTTTCTTCAGCAGTAGTAGCAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 524634 34 + 3907144 TCCTCTAACTTTTCCTCAGCAGTAGTAGCAAAAA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337092 30 + 6628207 TCCT----CTTTTCTTCAAAGGTAGTAGCAAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3318977 34 - 5917169 TCCTCTAACTTTTCTTCCACAGTAGTAGCAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9279669 34 - 10531588 TCCTCTAACTTTTCTTCAGCAGTAGAAGCAAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54930613 32 + 72247402 TTCTCTAATTTTCCATCCACAGTAAAATCAAA-- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2939946 32 + 9850184 TTCTCTAACTTTCCTTCAGCAGTAAAATCAGA-- i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22468201 25 - 129401213 ------TTCATTTCTCCTGC-GTCGAAATAAA-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80463318 33 + 88915250 CCATCTAATTTTCCTTTGGCAGTAAGAGTGAAA- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923845 31 + 1009443 -CCTCAAACTTTGCTTTAGCATTAACAAGTGA-- i dasNov3.JH569970 C 0 C 0 e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13704760 0 + 13852661 C a score=3500005.000000 s hg38.chr16_GL383557v1_alt 46489 281 + 89672 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-AGGG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACCGTGGCCGTGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATGTAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AA---------AAAAAAAA s panTro5.chr16 21481621 281 - 81586097 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-AGGA--GCAAGCAGAGGGAATGTGCATCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACCGTGGCCGTGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATGTAGAGGCTGGGAAGTATCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AA---------AAAAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540072 281 - 90481686 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-AGGA--GCAAGCAGAGGGAATGTGCATCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACCGTGGCCGTGCACCACTCTG-TG-------AATGCATGTTCCTGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATGTAGAGGCTGGGAAGTATCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AA---------AAAAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772513 282 + 3010529 ATCCCTGTG-TTTTCATGTAAGCAGGGAC-AGGG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGTAAAACCGTGGCCGTGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAAAAGAAGTTAAAATAATAAATGTAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AA---------AAAAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53882990 284 + 163208435 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-AGGG--GCAGGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACTGTGGTCATGCACCACTCTG-TG-------AATGCATGTTCACGTGCGGGCAGAAACTTCTGAAGAGCCTCCTGTAATAGAAGTTAAAATAATAAATGTAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC--AAAAA---------AAAAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357241 286 - 74971481 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-GGGG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAGCTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACAGTGGCCATGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAATAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACCaaaaaaa---------aaaaaaaa i rheMac8.chr20 C 0 I 2 s macFas5.chr20 21069256 286 - 78541002 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-GGGG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAGCTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACAGTGGCCATGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAATAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACCaaaaaaa---------aaaaaaaa i macFas5.chr20 C 0 I 2 s macNem1.NW_012011355v1 11999462 276 - 26466322 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-GGGG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACAGTGGCCATGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAG-AACTTCTG-AGAGCCTCCTGT-ATAGAAGTTAAAAATATAAATATAGAGGCTGGGAAGTGTC--GAGGCACAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AA---------AAAAAAAA i macNem1.NW_012011355v1 C 0 I 2 s cerAty1.NW_011999143v1 20788350 285 + 43916225 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-GGAG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACAGTGGCCATGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-AAAAAA---------AAAAAAAA i cerAty1.NW_011999143v1 C 0 I 2 s manLeu1.NW_012101698v1 6772773 281 - 7209941 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-GGAG--GCAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACAGTGGCCATGCACCACTCTG-TG-------AATGCATGTTCATGTGCAGGCAGAAACTTCTAAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCAAATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----aa---------aaaaaaaa i manLeu1.NW_012101698v1 C 0 I 8889 s colAng1.NW_012123265v1 524668 276 + 3907144 ATCCCTGTG-TTTTCATGTGGGCAGGGAC-GGGG--GTAAGCAGAGGGAATGTGCACCAATTCCTGT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACGTTGAGGCTCGT-AAACAGTGGCCATTCACCACTCTG-TG-------AATGCATGTTCACGTGCAGGCAGAAACTTCTA-AGAGCCTCCTGTAACAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCaaatg----aagaattcaaaatgagaaatgtatcttagc-----aa---------aaaaaaaa i colAng1.NW_012123265v1 C 0 I 19 s saiBol1.JH378225 6337122 281 + 6628207 ATTGCTGTG-TTTTCATGTGGGCAGGGAT-GGGG--ACAAGCAGAGGGAATGTGTACCAATTCTTAT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACATTAAGGCTCGT-AAACTGTGCCCACGCACCACTCGA-TG-------AACGCACGATCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCAGATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AA---------AAAATAAA i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3319011 285 - 5917169 ATTCCCATG-TTTTCATGTGGGCAGGGAC-AGGG--GCAAGCAGAGGGAATGTGTACCAATTCCTAT-AAAAGGGGCTGTAAACTTGCTTGCTCATGAAGTGCACATTAAGGCTCGT-AAACTGTGCCCACGCACCACTCGA-TG-------AATGCACGATCATGTGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTCCAGAGCCCAGACGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACA-----AA-----AAATAAAATAAA i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9279703 290 - 10531588 TTTCCCGTG-TTTTCATGTGGGCAGGGAC-GGGG--GCAAGCAGAGGGAATGTGTACCAATTCCTAT-AAAAGGGACGGTAAACTTGCTTGCTCATGAAGTGCACATTAAGGCTCGT-AAACTGTGCCCACACACCACTTGA-TG-------AATGCACGTTCATATGCAGGCAGAAACTTCTGAAGAGCCTCCTGTAACAGAAGTTAAAATAATAAATATAGAGGCTGGGAAGTGTTCAGAGCCCAGATGAAGAAAGAATTCAAAATGAGAAAAGTATCTTACC-----AAAAAAAAAATAAAATAAA i aotNan1.NW_018500622v1 C 0 I 1 s micMur3.chr20 54930645 282 + 72247402 ATTCCCATG-TTTTCATTTGGGCAGGTTT-GGGG--ACAA----ACAGAATGTGCACCAATTCCCAT-AAAAGGGGCTGCATACGTGCTTGCTGATAAAGTACACGTTGAGGCTTGG-AAACCATGGCCATGTACCACTCTG-TG-------AATACACATTCATGCGCAGGCAGAAACTTCTGAAAAGCCTCTTCTACCAGGAGTTAAAACAATAAAAATAGACGCTGGGAAGCATCCAGGGCCCAAATGAAGAAAGAATTCAAGATGAGAAATGTATCTTACCAAAAAAA---------AAAAAAAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2939978 279 + 9850184 ATCCCCATG-TTTTCATCTAGGCAGGTTT-GGGG--ACAAGCAGACAGAGGGTACACCAATTCCTGT-AAAAGGGGCTGTATGCTTGCTTGCTCATAAAGTACACGTTGAGGCTTGC-AAACCATGGCCATGCACCACTCTG-TG-------AATGCACATTCATGTGCAGGCAGAAACTTCTGAAAAGCCTCCTTTACCAGGAGTTAAAACAATAAAAATAGACGCTGGGAAGCATCCAGGGCCCAAATGAAGAAAGAATTCAAAATGAGAAATATATCTTACC----------------AAAAGGAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13704760 263 + 13852661 aTCCCCACG-TGTTCATTTGGGCAAG------------AA---GAAGGACTGTGCACCAATTCCTGTAAAAAGGGACTGTATACTTGCTTGCTCATGAAGTTCACACTGAGGCTTGT-AA--CGTGGCCATGCACCACTCTACTG-------AAAGTACATTCATGGGCAGGTAGAAACTCCTGAAAAGCATCCTGTAACAGGAGTTAAAACAGCAAAAATAGACACTGGGAAGCATCCAGGGCCCAAATGAAGAATGAATTCAAAAGGAGAAATATATCTTAT--------------------AAAAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468226 254 - 129401213 ATTCCCATGCTTTTCATTTGGGCAGAGACTGGGA--ACAAACAGAGGGAGTGTGCATCATTTCCCGT-AAAGGGGGAAGTTTCAAGGATTGCTCAGGAAAGACGCGGGTAAGAGCCT-ACTCAGTAGCCAAGCGCCCCGCTC-TGCTCCACCAGAGTGCATTCACATGCAGGCAGGAACTTC----------------------GTTTGAACAG--------------GTTAAGCATTCCAAACCTGAGTGAATAAAGAGTTCGAAATGAGAAACGTATCTCGGC-----AG---------AAGAAAGA i mm10.chr8 C 0 I 4 s canFam3.chr5 80463351 277 + 88915250 -TCCCCATG-TTTTCACTTGTG-GGGAGC-GGGGCTGCAAGCAGAGGGAATGTGCACCAGTTCCCAT-AAAAGGGTCTGTATACCTGCTTGCTCATGAAGTACATGTTGAAGCTTGT-GAGCCATGTCCATGCACTTCTCTG-TG-------AATGCACATTCATGTGTGGGCAGGAACATTCAAAGAGCCTCCTATACTAGGAGTTAAAACAATAAAAATGGAGACTGGAAAGTACCCAGAGCCCAAATGAAGAAACAATTGAAAATGAGAAAAGT-TCTTACC-----AA---------AAAAA--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 923876 261 + 1009443 AATCCCATG-TTCCCTTCTGGG---GGGC-AG----GCAAGCAGGGGGAGAATGTACCAATTCCTGT-AAAAGGGCCTGTATACCTGCTTGTTCATGAAGTACATGTTAAGGCTCGT-CAGCCATGTCCATGTGCCACTCTA-TC-------AATGCACTTTCATAGATAAGCAGAAACTTCCAAAGGTCCTCCTATATCAGGAATGAAAA-AATAAAAGTAG-------GAAGCACCCAGAACCCA----AAGAAAGAGTTCAAAGTGAGAAAAGTATCCTACC-----AA---------AAAAA--- i dasNov3.JH569970 C 0 C 0 e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I a score=4741682.000000 s hg38.chr16_GL383557v1_alt 46770 368 + 89672 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCAGC-AGGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGACG-TTCTGGCTCTGCTCCAGCTGAGGCGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTCGCAGCTGATTCCTTAGAGTATGAGT------------GCTATTTTTAACACTTTTGCATTTGTAATTACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGCAGAAGGGAAGTGCTGGGAATTCT-----CTGCAAGACTA s panTro5.chr16 21481902 368 - 81586097 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCAGC-AGGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGACA-TTCTGGCTCTGCTCCAGCTGAGGCGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTCGCAGCTGATTCCTTAGAGTATGAGT------------GCTATTTTTAACACTTTTGCATTTGTAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGCAGAAGGGAAGTGCTGGGAATTCT-----CTGCAAGACTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540353 368 - 90481686 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCAGC-AGGTCCCAATGTGCTCAAGTGCACCTGCGGTCACAGACA-TTCTGGCTCTGCTCCAGCTGAGGCGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTCGCAGCTGATTCCTTAGAGTATGAGT------------GCTATTTTTAACACTTTTGCATTTGTAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGCAGAAGGGAAGTGCTGGGAATTCT-----CTGCAAGACTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 772795 367 + 3010529 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AACCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCAGC-AGGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGACA-TTCTGGCTCTGCTCCAGCTGAGGCGTGAG-CCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTGGCAGCTGATTCCTTAGAGTATGAGT------------GCTATTTTTAACACTTTTGCATTTGTAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGCAGAAGGGAAGTGCTGGGAATTCT-----CTGCAAGACTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883274 368 + 163208435 TCATTACAGCAGAATCCTCTTTGCAATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCAGC-AGGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGACA-TTCTGGCTTTGCTCCAGCTGAGGCGTGAGCCCCCAGAGGCCTGAGTTATGTGAATTTTCTGCTTATTAGAGAGTGTTTGGCAGCTGATTCCTTAGAGTATGAGT------------GCTATTTTAAACACTTTTGCATTTGTAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGCAAAAGGGAAGTGCTGGGAATTCT-----CTGCAAGACTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357529 368 - 74971481 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGCC--GGATTTTCTAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCCGTTCTAGC-AAGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGGCA-TTCTGGCTTTGCTCCAGCTGAGGTGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTGGCAGCTGATTCCTTAGAGAATAAGC------------ACTATTTTTAACACTTTTGCATTTGCAGTCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGTAAAAGGGAAGTGCTGGGAATTCT-----CTTCAAGGATA i rheMac8.chr20 I 2 C 0 s macFas5.chr20 21069544 368 - 78541002 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGCC--GGATTTTCTAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAACCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCCGTTCTAGC-AAGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGGCA-TTCTGGCTTTGCTCCAGCTGAGGTGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTGGCAGCTGATTCCTTAGAGAATAAGC------------ACTATTTTTAACACTTTTGCATTTGCAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGTAAAAGGGAAGTGCTGGGAATTCT-----CTTCAAGGATA i macFas5.chr20 I 2 C 0 s macNem1.NW_012011355v1 11999740 357 - 26466322 TCATTACAGCAG-ATCCTCTTTGCG-TTAGTGGAGCC--GGATTTTCTAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------TCCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCC-TTCTAGCAAAGTCCCAATGTGCCCAAGT--ACCTGCGGTCACAGGCA-TTCTGGCTTTGCTCCAGCTGAGGTGTGAG-CCCCAGAGGCCT-AGTTATGTG--ATTTCTGCTTATTAG-GAGTGTTTGGCAGCGTA-TCCTTAGAGAATAAGC------------ACTATTTTTAACAC-TTTGCATTTGCAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGTAAAAGGGAAGTGCTGGGAATTCT-----CTTCAAGGATA i macNem1.NW_012011355v1 I 2 n 2 s cerAty1.NW_011999143v1 20788637 368 + 43916225 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGCC--GGATTTTCTAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCTAGC-AAGTCCCAATGTGCCCAAGTGCACCTGCGGTCACAGGCA-TTCTGGCTTTGCTCCAGCTGAGGTGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTGTTTGGCAGCTGATTCCTTAGAGAATAAGC------------ACTATTTTTAACACTTTTGCATTTGCAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGTAAAAGGGAAGTGCTGGGAATTCT-----CTTCAAGGATA i cerAty1.NW_011999143v1 I 2 C 0 s colAng1.NW_012123265v1 524963 368 + 3907144 TCATTACAGCAGAATCCTCTTTGCGATTAGTGGAGTC--GGATTTTCTAAACTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCTAGC-AAGTCCCAATGTGCCCAAGTGCACCTGCAGTCACAGACA-TTCTGGCTTTGCTCCAGCTGAGGTGTGAGCCCCCAGAGGCCTGAATTATGTGAAATTTCTGCTTATTAGAGAGTGTTTGGCAGCTGATTCCTTAGAGAATGAGC------------ACTACTTTTAAAATTTTTGCATTTGTAATCACCCAGGAGTTGGGCACTTGAGGACACCTTTATTAGTAAAAGGGAAGTGCTGGGAATTCT-----CTTCAAGGATA i colAng1.NW_012123265v1 I 19 C 0 s saiBol1.JH378225 6337404 369 + 6628207 TCATTACAGCAGAATCCTTTTTGCAATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCAGC-AGTTCCCAATGTGTCCAAGTGCACCTGTGGTCACAGACATTTCTGGCTTTGCTCCAGCTGAAGTGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGCATTTGGCAGCTGATTGCTTAGAGTATGAGC------------ACTATTTTTAACACTTTTGCATTTGTAATCACCCAGGGGTTGGGCACTTGAGGACACCTTTATTAGCAAAAGGGAAGTGCTGGGAATTCT-----CTCCAAGAGTA i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3319297 368 - 5917169 TCATTACAGCAGAATCCTTTTTGCAATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTT-CGGC-AGGTCCCAATGTGTCCAAGTGCACCTGCGGTCACAGACATTTCTGGCTTTGCTCCAGCTTAAGTGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTATTAGAGAGTATTTGGCAGCTGATTCCTTAGAGTATCAGC------------ACTATTTTTAACACTTTTGCATTTGTAATCACCCAGGGGTTGGGCACTTGGGGACACCTTAATTAGCAAAAGGGAAGTGCTGGGAATTCT-----CTCCAAGAGTA i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9279994 369 - 10531588 TCATTACAGCAGAATCCTTTTTGCAATTAGTGGAGTC--GGATTTTCCAAGCTGCAAATGTCAGCAA---AAGCTCAACC--------CTCCAGCCCTCTCCTAAATCAA----CTGCA--GAGGCCAGCTTGCTGTTCCGGC-AGGTCCCAATGTGTCCAAGTGCACCTGCGGTCACAGACATTTCTGGCTTTGCTCCAGCTGAAGTGTGAGCCCCCAAAGGCCTGAGTTAGGTGAAATTTCTGCTTATTAGAGAGCATTTGGCAGCTGATTCCTTAGAGTATGAGC------------ACTATTTTTAACACTTTTGCATTTGTAATCACCCAGGGGTTGGGCACTTGAGGACACCTTTATTAGCAAAACGGAAGTGCTGGGAATTCT-----CTCCAAGACTA i aotNan1.NW_018500622v1 I 1 C 0 s micMur3.chr20 54930927 375 + 72247402 TCATTGCAGCAGAATCCTCTTTGCAATTAGTAGAGCA--GGATTTTCCAAGTTGCAAATGCCAGCAA---AAGCTCAACC--------CTCCAGTCCTCTCCTAAATCATCTGCCTACAGTGAGGCCAGCCCGCTGTTCCGGC-AGGTCCCAATGTGCCCAAGTGCACCTGCAGTCACAGACGTTTCTGGCTTTGCTCCAGCTGAGGCGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTGTTAGAGAGCATTTCACAGCTGATTCCTTAGAGTATGAGC------------ACTATTTTTAACACTTGTGCATTCGTAATCACCCAGGGGTTGGGCGCTCGAGGACACCTTTATTAGCAGAAGGAAAGTGTTGGAAATTCT-----TTCCAGGAGTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2940257 375 + 9850184 TCATTGCAGCAGAATCCTCTTTGCAATTAGTAGAGCA--GGATTTTCCAAGTTGCAAATGCCAGCAA---AAGCTCAGCC--------CTCTAGTCCTCTCCTAAATCATCTACCTACAGTGAGGCCAGCCCGCTGTTCCGGC-AGGTCCCAATGTGCCCAAGTGCACCTGCAGTCACAGACGTTTCTGGCTTTGCTCCAGCTGAGGCGTGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTGTTAGAGAGCATTTCACAGCTGATTCCTTAGAGTATGAGC------------ACTATTTTTAACACTTGTGCATTTGTAATCACCCAGGGCTTGGGTGCTTGAGGACGCCTTTATTAGCAGAAGGAAAGTGCTGGAAATTCT-----TTCCAGGAGTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13705023 378 + 13852661 TCATTGCAGCAGAATCCTCTTTGCAATTAGTAGAGCA--GGATTTT-CAAGTTGCAAATGTCAGCTA---AAGCTTAACCTCCCCCCACCCCAGTCCTCTCCTAAATCAT----CTACAGTGAGGCCAGCCCCCTGTTCCGGC-AGGTCCCAATGCGCCCAAGTGCACCTGCAGTCACAGACATTTCTGGCTTTGCTCCAGCTGAGGCATGAGCCCCCAGAGGCCTGAGTTATGTGAAATTTTTGCTTATTAAACAGCATTTCACAGCTGATTCCTTAGAGTATGAGC------------TCTATTTTTAACACTTGTGCATTTGTAATCACCCAGGGGTTGGGCACTTGAGGACACCTTTATTAGCAAAAGGGAAGTGCTAGAAATTCT-----TCCCAGGAGTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468484 368 - 129401213 CCGTTACAACAGA----TCTTTGCGAAGAGTGGGGTATGGGTTTTTCCAAGCTGCAAATGTCTGCCGCGCGAGCTCAGCC--------C-CCAGCCGCCT----AATCAG----CTGCAGCAAAGCTGGCCTGTTGTTCCCGC-AGGTCCCAATGTGCCCAAGTACACCTGCAGTCACAGGCATTTCTGGCTGGACTCCAGCGGAGCCAGAGCCCCCCAGAGGCCTGAGTTATGTGAAATTTCTGCTTGTTAGAGAGCATTTGGCAGCTGAGTCCTCGGAGTCTGAGCACTCAAGTCTTAACTAATTTGAACACTTGTGCATGTGTGATCACCAGGGGGTCGGGCAATGGAGGACACCTTTAT-----------AAGTGCTGGGAATTCA-----TTCCAAGGGTA i mm10.chr8 I 4 C 0 s canFam3.chr5 80463628 371 + 88915250 TCATTACAGCAGAATCTTCTTTGCAATTAGTGGAGCA--GGATTTTCCAAGCTGCAAATGTCAGCAG---AAGCTCAACC--------CTCCTATCCTCTCCTAAATCAA----TTGCAATGGGGCCAGTTCCCTGTTCCAGC-AGGTCCCAATGTGCCCAAGTGCATTTGCAGTCACAGACATTTCTGGCTTTGCTCCAGCTGAGCCGTGAGCCCCCAGAGGCCTGAGGTATGTGAAATTTCTGCTTATTAAAGAATACTTGGCAGCTGATTCCTTGGAGTATAAGC------------ATTATTTTGAACACTTTTACGTCCACGATCATCCAGAGGTTGGGCACTCGACAACACCTTTGTTAGCAAAAGGGAAGTGCTGGAAATTCT-----TCCCAAAAGTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924137 371 + 1009443 TCATTACAACAGATTCCTCTTTGCAATTAGTGAGAAA--GGATTTCCCAAGCTGCAAACATCAGCAA---AAGCTCAACC--------CTCCAGCTGCCTCCTAAATCAA----CTGCAATGAAGCCAGCTCGCTGTT-TGGC-AGGTCCTGATGTGCCCAAGTGCACCTGCAGTCACAGATATTTCTGGCTTTGCTCCAGCTGAGGCGTGAGCCTCCAGAGGCCTGAGTTATGTGAAATCTGTGCTTATTAGCGAGCACTT---AGCTGATTCCTTAGAGTATGAGC------------ACTATTTTTAACACTTTTACATATGTAATGACTTGTGCATTGAGCACTTCAGGACGCCTT-ATTAGCAAAAGGGAAATGGTGGAAATTCTAGAAATTCCAAGAATA i dasNov3.JH569970 C 0 C 0 e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I a score=84719.000000 s hg38.chr16_GL383557v1_alt 47138 8 + 89672 TCAAGACC s panTro5.chr16 21482270 8 - 81586097 TCAAGACC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540721 8 - 90481686 TCAAGACC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773162 8 + 3010529 TCAAGACC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883642 8 + 163208435 TCAAGACC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21357897 8 - 74971481 TCAAGACt i rheMac8.chr20 C 0 I 324 s macFas5.chr20 21069912 8 - 78541002 TCAAGACt i macFas5.chr20 C 0 I 309 s macNem1.NW_012011355v1 14467411 8 + 26466322 tcAAGACG i macNem1.NW_012011355v1 I 4219 C 0 s cerAty1.NW_011999143v1 20789005 8 + 43916225 TCAAGACC i cerAty1.NW_011999143v1 C 0 C 0 s colAng1.NW_012123265v1 525331 8 + 3907144 TCAAGACG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337773 8 + 6628207 TCAAGACC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3319665 8 - 5917169 TCAAGACC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280363 8 - 10531588 TCAAGACC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931302 7 + 72247402 TCAA-ATC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2940632 7 + 9850184 TCAA-ATC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13705401 8 + 13852661 TCAAGACC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468852 8 - 129401213 TGAAGGAC i mm10.chr8 C 0 I 1 s canFam3.chr5 80463999 8 + 88915250 TCAAGACC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924508 8 + 1009443 TCAAGGCC i dasNov3.JH569970 C 0 C 0 e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I a score=45562.000000 s hg38.chr16_GL383557v1_alt 47146 5 + 89672 TTTTT- s panTro5.chr16 21482278 5 - 81586097 TTTTT- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540729 5 - 90481686 TTTTT- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773170 5 + 3010529 TTTTT- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883650 5 + 163208435 TTTTT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358229 5 - 74971481 TTTTT- i rheMac8.chr20 I 324 C 0 s macFas5.chr20 21070229 5 - 78541002 TTTTT- i macFas5.chr20 I 309 C 0 s macNem1.NW_012011355v1 14467419 5 + 26466322 TTTTT- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20789013 5 + 43916225 ttttt- i cerAty1.NW_011999143v1 C 0 T 1044 s colAng1.NW_012123265v1 525339 5 + 3907144 TTTTT- i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337781 5 + 6628207 TTTCC- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3319673 5 - 5917169 TTTCC- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280371 5 - 10531588 TTTCC- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931309 5 + 72247402 CTTTC- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2940639 5 + 9850184 CTTTC- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13705409 5 + 13852661 TTTTC- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468861 5 - 129401213 TTTCT- i mm10.chr8 I 1 C 0 s canFam3.chr5 80464007 4 + 88915250 -TTTT- i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 924516 5 + 1009443 -TTTTG i dasNov3.JH569970 C 0 C 0 e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I a score=12097.000000 s hg38.chr16_GL383557v1_alt 47151 2 + 89672 GC s panTro5.chr16 21482283 2 - 81586097 GC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540734 2 - 90481686 GC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773175 2 + 3010529 GC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883655 2 + 163208435 GC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358234 2 - 74971481 AT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070234 2 - 78541002 AT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467424 2 + 26466322 AT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20787974 2 + 43916225 AT i cerAty1.NW_011999143v1 T 1044 C 0 s colAng1.NW_012123265v1 525344 2 + 3907144 AT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337786 2 + 6628207 GT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3319678 2 - 5917169 AT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280376 2 - 10531588 GT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931314 2 + 72247402 AT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2940644 2 + 9850184 AT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13705414 2 + 13852661 AT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468866 2 - 129401213 GT i mm10.chr8 C 0 C 0 s canFam3.chr5 80464012 2 + 88915250 GT i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 924521 2 + 1009443 GT i dasNov3.JH569970 C 0 C 0 e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e chlSab2.chr5 58223264 4671 + 75399963 I e calJac3.chr20 21530311 10 - 44557958 I a score=1224269.000000 s hg38.chr16_GL383557v1_alt 47153 92 + 89672 CAATAGAGTTGGAGTAAGTCACAGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG s panTro5.chr16 21482285 92 - 81586097 CAATAGAGTTGGAGTAAGTCACAGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540736 92 - 90481686 CAATAGAGTTGGAGTAAGTCACAGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773177 92 + 3010529 CAATAGAGCTGGAGTAAGTCACAGATATG-CTAACA-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883657 92 + 163208435 CAATAGAGTTGGAGTAAGTCACAGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAACGCAG-CAAGTTATATAACAAAATATTTAACCCTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358236 92 - 74971481 CAATAAAGTTGGAGTAAGTCACGGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070236 92 - 78541002 CAATAAAGTTGGAGTAAGTCACAGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467426 92 + 26466322 CAATAAAGTTGGAGTAAGTCACGGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20787976 92 + 43916225 CAATAAAGTTGGAGTAAGTCACGGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58227935 92 + 75399963 CAATAGAGTTGGAGTAAGTCACGGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTACATAACAAAATATTTAACCCTGG i chlSab2.chr5 I 4671 C 0 s colAng1.NW_012123265v1 525346 92 + 3907144 CAATAGAGTTGCAGTAAGTCACAGATCTG-CTAACT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337788 92 + 6628207 CAATAGCGTTGGAGTAAGTCACAGATCTG-CTAGCT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3319680 92 - 5917169 CAATAGAGTTGGAGTAAGTCACAGATCTG-CTAGCT-AAT----AGTG----AGGGCACTTAC------------------------AAAAGACAG-CAGGTTATATAACAAAATATTTAACCCTGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280378 92 - 10531588 CAATAGAGTTGGAGTAAGTCACAGATCTG-CTAGCT-AAT----AGTG----AGGGCACTTAC------------------------ATAAGACAG-CAAGTTATATAACAAAATATTTAACCCTGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931316 93 + 72247402 CAAGAGAGTTAGAAAAAGTCACAGATCTT-CCAACT-AATAGTAAGTG----AGGGCACTTAC------------------------ATAAGATAG-CAAATTATAT---AAAATATTTAACCCTGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2940646 93 + 9850184 CAAGAGAGTTGGAAGAAGTCACAGATGTT-CCAACT-AATAGTAAGTG----AGGGCACTTAC------------------------ATAAGATAG-CAAGTTATAT---AAAATATTTAACCCTGG i proCoq1.NW_012152729v1 C 0 I 54 s otoGar3.GL873566 13705416 97 + 13852661 CAACATAGTTGGAAGAAGTTGAAGATCTTCCCAACT-CATAGTAAGTG----AGGGCACTTAC------------------------ATAAGACTG-CAAGTTATATAACAAAATATTTAACCCTGG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468868 78 - 129401213 CAAAAGAATTGGAGGAAGTCACAGATTTA---------AT----GGTG----AGGACACTTAT------------------------GTAAGATAG-CAAGttatataacaaaatattta------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80464014 117 + 88915250 CAACAGAGTTGGAGGAAGTCATAGATCTT-CCAACTAAAT----AGTA----GGGGCACTTATATAAGATAGTAAGTTTAAAAAAAAATAAGATAG-TAAGTTATGTGATAAAATATTTAATTCTAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924523 93 + 1009443 CAACAGAGTTGGAGGAATGCATACATCTT-CAATCT-AGA----AGTGAGTTAGGTCACTTAC------------------------ATAAGATAGCCAAGTTTTGCAACAAAATATTTAACT---- i dasNov3.JH569970 C 0 C 0 e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e calJac3.chr20 21530311 10 - 44557958 I a score=73503.000000 s hg38.chr16_GL383557v1_alt 47245 6 + 89672 AAGTAG s panTro5.chr16 21482377 6 - 81586097 AAGTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540828 6 - 90481686 AAGTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773269 6 + 3010529 AAGTAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883749 6 + 163208435 AAGCAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358328 6 - 74971481 AAGTAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070328 6 - 78541002 AAGTAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467518 6 + 26466322 AAGTAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788068 6 + 43916225 AAGTAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228027 6 + 75399963 AAGTAG i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525438 6 + 3907144 AAGTAG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337880 6 + 6628207 AAGTAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3319772 6 - 5917169 AAGTAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280470 6 - 10531588 AAGTAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931409 6 + 72247402 GAGTAG i micMur3.chr20 C 0 I 12 s otoGar3.GL873566 13705513 6 + 13852661 GAGTAG i otoGar3.GL873566 C 0 I 5 s mm10.chr8 22468946 6 - 129401213 aaatat i mm10.chr8 C 0 I 5 s canFam3.chr5 80464131 6 + 88915250 GAGGAG i canFam3.chr5 C 0 I 5 s dasNov3.JH569970 924616 6 + 1009443 GAGTCG i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e calJac3.chr20 21530311 10 - 44557958 I a score=60531.000000 s hg38.chr16_GL383557v1_alt 47251 11 + 89672 CTAATGGAGAT-- s panTro5.chr16 21482383 11 - 81586097 CTAATGGAGAT-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540834 11 - 90481686 CTAATGGAGAT-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773275 11 + 3010529 CTAATGGAGAT-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883755 11 + 163208435 CTAATGGAGAT-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358334 11 - 74971481 CTAGTGGAGGT-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070334 11 - 78541002 CTAGTGGAGGT-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467524 11 + 26466322 CTAGTGGAGGT-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788074 11 + 43916225 CTAGTGGAGGT-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228033 11 + 75399963 CTAGTGGAGAT-- i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525444 11 + 3907144 CTAGTGGAGAT-- i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337886 11 + 6628207 ATAATGGAGAT-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3319778 11 - 5917169 ATAATGGAGAT-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280476 11 - 10531588 ATAATGGAGAT-- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13705524 7 + 13852661 ATAATGG------ i otoGar3.GL873566 I 5 C 0 s mm10.chr8 22468957 9 - 129401213 CCCACAGGG---- i mm10.chr8 I 5 C 0 s canFam3.chr5 80464142 7 + 88915250 GTAATGG------ i canFam3.chr5 I 5 C 0 s dasNov3.JH569970 924622 12 + 1009443 -AGAAGGAAGTAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54931415 12 + 72247402 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e calJac3.chr20 21530311 10 - 44557958 I a score=382100.000000 s hg38.chr16_GL383557v1_alt 47262 37 + 89672 AGATTGGTATTGGGATTAC-TTGATAATTTTTCCTTTA s panTro5.chr16 21482394 37 - 81586097 AGATTGGTATTGGGATTAC-TTGATAATTTTTCCTTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540845 37 - 90481686 AGATTGGTATTGGGATTAC-TTGATAATTTTTCCTTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773286 38 + 3010529 AGATTGGTATTGGGATTACTTTGATAATTTTTCCTTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883766 37 + 163208435 AGATTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358345 37 - 74971481 AGACTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070345 37 - 78541002 AGACTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467535 37 + 26466322 AGACTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788085 37 + 43916225 AGACTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228044 37 + 75399963 AGACTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTC i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525455 37 + 3907144 AGACTGGTATTGGGATTAC-TTGAGAATTTTTCCTTTC i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6337897 37 + 6628207 AGATTGGTATTGGAATTAC-TTGTGAGTTTTTCCTTta i saiBol1.JH378225 C 0 I 336 s cebCap1.NW_016107433v1 3319789 37 - 5917169 AGATTAGTGTTGGAATTAC-TTGGGAGTTTTTCCTTta i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280487 37 - 10531588 AGATTGGTGTTGCAATTAC-TTGGGAGTTTTTCCTTta i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931427 37 + 72247402 AGATTGGTATGTGGATTAC-TTGGGAATTTTTCCTTTA i micMur3.chr20 I 12 C 0 s otoGar3.GL873566 13705531 37 + 13852661 GGATTGGTATGTAGATTAC-TTGGGAGTTTTTCCttta i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22468966 37 - 129401213 AAGATAATAAAAGTATTTC-TTGGGAGTATTTCTCTTA i mm10.chr8 C 0 C 0 s canFam3.chr5 80464149 37 + 88915250 AGATTGCTATTTGGGTTAC-TTGGGAGTTTTTACttaa i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924634 24 + 1009443 AGATTGGTAT--GTGTTCC------AATTTTT------ i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e calJac3.chr20 21530311 10 - 44557958 I a score=24752.000000 s hg38.chr16_GL383557v1_alt 47299 2 + 89672 AA s panTro5.chr16 21482431 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540882 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773324 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883803 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358382 2 - 74971481 AA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070382 2 - 78541002 AA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467572 2 + 26466322 AA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788122 2 + 43916225 AA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228081 2 + 75399963 AA i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525492 2 + 3907144 AA i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3319826 2 - 5917169 aa i cebCap1.NW_016107433v1 C 0 I 426 s aotNan1.NW_018500622v1 9280524 2 - 10531588 aa i aotNan1.NW_018500622v1 C 0 I 312 s micMur3.chr20 54931464 2 + 72247402 AA i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13705568 2 + 13852661 aa i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469003 2 - 129401213 AA i mm10.chr8 C 0 I 5 s canFam3.chr5 80464186 2 + 88915250 aa i canFam3.chr5 C 0 C 0 e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924658 0 + 1009443 C e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I a score=81258.000000 s hg38.chr16_GL383557v1_alt 47301 9 + 89672 GATTATTTT s panTro5.chr16 21482433 9 - 81586097 GATTATTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540884 9 - 90481686 GATTATTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773326 9 + 3010529 GATTATTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883805 9 + 163208435 GATTATTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358384 9 - 74971481 GATTATTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070384 9 - 78541002 GATTATTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467574 9 + 26466322 GATTATTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788124 9 + 43916225 GATTATTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228083 9 + 75399963 GATTATTTT i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525494 9 + 3907144 GATTATTTT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54931466 9 + 72247402 AATTATTTT i micMur3.chr20 C 0 I 54 s otoGar3.GL873566 13705570 9 + 13852661 aattatttt i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22469010 9 - 129401213 CATTATTTT i mm10.chr8 I 5 C 0 s canFam3.chr5 80464188 9 + 88915250 aattatttt i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924658 7 + 1009443 --TTATCCA i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I a score=18558.000000 s hg38.chr16_GL383557v1_alt 47310 3 + 89672 CAg s panTro5.chr16 21482442 3 - 81586097 CAg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540893 3 - 90481686 CAg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773335 3 + 3010529 CAg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883814 3 + 163208435 CAg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358393 3 - 74971481 CAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070393 3 - 78541002 CAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467583 3 + 26466322 CAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788133 3 + 43916225 CAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228092 3 + 75399963 CAG i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525503 3 + 3907144 CAG i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13705580 3 + 13852661 aaa i otoGar3.GL873566 I 1 C 0 s dasNov3.JH569970 924665 3 + 1009443 CAG i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464197 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469019 0 - 129401213 C e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I a score=66111.000000 s hg38.chr16_GL383557v1_alt 47313 21 + 89672 gctggacacga-------tggctcatgc s panTro5.chr16 21482445 21 - 81586097 gctggacacga-------tggctcacgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540896 21 - 90481686 gctggacacga-------tggctcacgc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773338 21 + 3010529 gctggacacga-------tggctcacgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883817 21 + 163208435 gctggatgtga-------tggctcacgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358396 21 - 74971481 Tctgggtgcga-------gagctcacac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070396 21 - 78541002 Tctgggtgcga-------gagctcacac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467586 21 + 26466322 Tctgggtgcga-------gagctcacac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788136 21 + 43916225 Tctgggtgcga-------gagctcacac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228095 21 + 75399963 Tctgggtgcga-------gagctcacac i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525506 21 + 3907144 Tctgggtgcga-------gagctcacac i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13705583 16 + 13852661 tttGTCCATAA-------AAAAT----- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469019 24 - 129401213 ----GAAGCAAATGTCTTTGGCCTAGAC i mm10.chr8 C 0 I 392 e canFam3.chr5 80464197 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924668 0 + 1009443 C e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I a score=107729.000000 s hg38.chr16_GL383557v1_alt 47334 26 + 89672 c-tgtaatcccaga----gcttt-gggaggcc s panTro5.chr16 21482466 26 - 81586097 c-tgtaatcccaga----gcttt-gggaggcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540917 26 - 90481686 c-tgtaatcccaga----gcttt-gggaggcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773359 27 + 3010529 c-tgtaatcccaga----gctttggggaggcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883838 26 + 163208435 c-tgtaatcccaga----gcttt-gggaggcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358417 27 - 74971481 cttgtaatcccagc----acttt-gggaggct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070417 27 - 78541002 cttgtaatcccagc----acttt-gggaggct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467607 27 + 26466322 cttgtaatcccagc----acttt-gggaggct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788157 27 + 43916225 cttgtaatcccagc----acttt-gggaggct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228116 27 + 75399963 cttgtaatcccagc----acttt-gggaggct i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525527 27 + 3907144 cttgtaatcccagc----acttt-gggaggct i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13705599 24 + 13852661 -------TCCCAAATTATGTTTT-ATAAGGCT i otoGar3.GL873566 C 0 I 274 e canFam3.chr5 80464197 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924668 0 + 1009443 C e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I a score=61748.000000 s hg38.chr16_GL383557v1_alt 47360 13 + 89672 gaggcggggggat s panTro5.chr16 21482492 13 - 81586097 gaggcggggggat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540943 13 - 90481686 gaggcggggggat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773386 13 + 3010529 gaggtggggggat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883864 13 + 163208435 gaggcgggcggat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358444 13 - 74971481 gaggcgggtggat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070444 13 - 78541002 gaggcgggtggat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467634 13 + 26466322 gaggcgggtggat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20788184 13 + 43916225 gaggcgggtggat i cerAty1.NW_011999143v1 C 0 I 1844 s chlSab2.chr5 58228143 13 + 75399963 gaggcgggtggat i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525554 13 + 3907144 gaggcgggtggat i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80464197 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924668 0 + 1009443 C e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=229442.000000 s hg38.chr16_GL383557v1_alt 47373 57 + 89672 cacgaggtcaggagatccagaccatcctgggcaacatggtgaaaccccatctctact s panTro5.chr16 21482505 57 - 81586097 cacgaggtcaggagatccagaccatcctgggcaacatggtgaaaccccatctctact i panTro5.chr16 C 0 C 0 s panPan2.chr16 21540956 57 - 90481686 cacgaggtcaggagatccagaccatcctgggcaacatggtgaaaccccatctctact i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773399 57 + 3010529 cacgaggtcaggagatccagaccatcctgggcaacatggtgaaaccccatctctact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883877 57 + 163208435 cacgaggtcaggagatccagaccatcctgggcaacatggtgaaaccccatctctact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358457 57 - 74971481 cacgaggtcaggagatcgagaccatcctgggcaacatggtgaaaccccatctctaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070457 57 - 78541002 cacgaggtcaggagatcgagaccatcctgggcaacatggtgaaaccccatctctaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467647 57 + 26466322 cacgaggtcaggagatcgagaccatcctgggcaacatggtgaaaccccatctcttat i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58228156 57 + 75399963 catgaggtcaggagatcgagaccatcctgggcaacatagtgaaaccctatctctaat i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525567 57 + 3907144 cacgaggtcaggagatcgagaccatcctgggcaacatggtgaaaccccatctctaat i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80464197 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924668 0 + 1009443 C e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=5005.000000 s hg38.chr16_GL383557v1_alt 47430 1 + 89672 a s panTro5.chr16 21482562 1 - 81586097 a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541013 1 - 90481686 a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773456 1 + 3010529 a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883934 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358514 1 - 74971481 a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070514 1 - 78541002 a i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467704 1 + 26466322 a i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58228213 1 + 75399963 a i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525624 1 + 3907144 a i colAng1.NW_012123265v1 C 0 C 0 s dasNov3.JH569970 924668 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464197 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=31427.000000 s hg38.chr16_GL383557v1_alt 47431 6 + 89672 aaaata s panTro5.chr16 21482563 6 - 81586097 aaaata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541014 6 - 90481686 aaaata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773457 6 + 3010529 aaaata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883935 6 + 163208435 aaaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358515 6 - 74971481 aaaata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070515 6 - 78541002 aaaata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467705 6 + 26466322 aaaata i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58228214 6 + 75399963 aaaata i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525625 6 + 3907144 aacata i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80464197 6 + 88915250 aaaata i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924669 6 + 1009443 AAAATT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=139321.000000 s hg38.chr16_GL383557v1_alt 47437 40 + 89672 caaaaattagctgggcgtggtgacatgcacttgtagtccc s panTro5.chr16 21482569 40 - 81586097 caaaaattagctgggcgtggtgacatgcacttgtagtccc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541020 40 - 90481686 caaaaattagctgggcgtggtgacatgcacttgtagtccc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773463 40 + 3010529 caaaaattagctgggcgtggtggcatgcacttgtagtccc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883941 40 + 163208435 caaaaattagctgggcgtggtggcatgcacctgtagtccc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358521 40 - 74971481 caaaaatcagctgggcatggtggcatccgcctgttgtacc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070521 40 - 78541002 caaaaatcagctgggcatggtggcatccgcctgttgtacc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467711 40 + 26466322 caaaaatcagctgggcatggtggcatccgcctgttgtacc i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58228220 40 + 75399963 caaaaattagctgggcatggtggcatccgcctgttgtacc i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525631 40 + 3907144 caaaaattagctgggcatggtggcatctgcctgttgtacc i colAng1.NW_012123265v1 C 0 C 0 s dasNov3.JH569970 924675 30 + 1009443 CTCAAACTCTCTAAG----------TGCATTTACAATACC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=341985.000000 s hg38.chr16_GL383557v1_alt 47477 86 + 89672 agctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggcggttgcagtgagccgagatcgtgccact-gcactcca s panTro5.chr16 21482609 86 - 81586097 agctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggcggttgcagtgagccgagatcgtgccact-gcactcca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541060 86 - 90481686 agctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggcggttgcagtgagccgagatcgtgccact-gcactcca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773503 87 + 3010529 agctactcaggaggctgaggcaggagaatcacttgaacccagaaggtggaggttgcagtgagccaagatagtgccactggcactcca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53883981 86 + 163208435 agctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatcatgccact-gcactcca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358561 86 - 74971481 agctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccatt-gcactcca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070561 86 - 78541002 agctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccatt-gcactcca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14467751 86 + 26466322 agctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcgtgccatt-gcactcca i macNem1.NW_012011355v1 C 0 I 1153 s chlSab2.chr5 58228260 86 + 75399963 agctactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatcatgccatt-gcactcca i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525671 86 + 3907144 agctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccgagattgtgtcatt-gcactcca i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924705 0 + 1009443 C e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=61770.000000 s hg38.chr16_GL383557v1_alt 47563 20 + 89672 gcctgggcgacagagcaaga s panTro5.chr16 21482695 20 - 81586097 gcctgggcgacagagcaaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541146 20 - 90481686 gcctgggcgacagagcaaga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773590 19 + 3010529 g-ctgggcgacagagcaaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884067 20 + 163208435 gcctgggtgacagagcaaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358647 20 - 74971481 gcctgggcaacagagcaaga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070647 20 - 78541002 gcctgggcaacagagcaaga i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228346 20 + 75399963 gcctgggcaacagagcaaga i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 525757 20 + 3907144 gcctgggcaacagagcaaga i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e dasNov3.JH569970 924705 0 + 1009443 C e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=30639.000000 s hg38.chr16_GL383557v1_alt 47583 9 + 89672 ctccatctc s panTro5.chr16 21482715 9 - 81586097 ctccatctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541166 9 - 90481686 ctccatctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773609 9 + 3010529 ctccatctc i gorGor5.CYUI01000018v1 C 0 I 4 s nomLeu3.chr2 53884087 9 + 163208435 ctccatctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358667 9 - 74971481 cgccatctc i rheMac8.chr20 C 0 I 10 s macFas5.chr20 21070667 9 - 78541002 cgccatctc i macFas5.chr20 C 0 I 14 s chlSab2.chr5 58228366 9 + 75399963 cgccatctc i chlSab2.chr5 C 0 I 9 s colAng1.NW_012123265v1 525777 9 + 3907144 cgccatctc i colAng1.NW_012123265v1 C 0 I 2 s dasNov3.JH569970 924705 9 + 1009443 CTCCACCCT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e manLeu1.NW_012101698v1 6773054 8889 - 7209941 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=23105.000000 s hg38.chr16_GL383557v1_alt 47592 7 + 89672 aaaaaaa-- s panTro5.chr16 21482724 7 - 81586097 aaaaaaa-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541175 7 - 90481686 aaaaaaa-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773622 7 + 3010529 aaaaaaa-- i gorGor5.CYUI01000018v1 I 4 C 0 s nomLeu3.chr2 53884096 7 + 163208435 acaaaaa-- i nomLeu3.chr2 C 0 I 316 s rheMac8.chr20 21358686 7 - 74971481 aaaaaaa-- i rheMac8.chr20 I 10 C 0 s macFas5.chr20 21070690 7 - 78541002 aaaaaaa-- i macFas5.chr20 I 14 C 0 s chlSab2.chr5 58228384 7 + 75399963 caaaaaa-- i chlSab2.chr5 I 9 C 0 s manLeu1.NW_012101698v1 6781943 7 - 7209941 aaaaaaa-- i manLeu1.NW_012101698v1 I 8889 C 0 s colAng1.NW_012123265v1 525788 7 + 3907144 aaaaaaa-- i colAng1.NW_012123265v1 I 2 C 0 s dasNov3.JH569970 924714 7 + 1009443 --AAGAACC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=-505.000000 s hg38.chr16_GL383557v1_alt 47599 1 + 89672 -a s panTro5.chr16 21482731 1 - 81586097 -a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541182 1 - 90481686 -a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773629 1 + 3010529 -a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884419 1 + 163208435 -a i nomLeu3.chr2 I 316 C 0 s rheMac8.chr20 21358693 1 - 74971481 -a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070697 1 - 78541002 -a i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228391 1 + 75399963 -a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6781950 1 - 7209941 -a i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525795 1 + 3907144 -a i colAng1.NW_012123265v1 C 0 C 0 s dasNov3.JH569970 924721 1 + 1009443 C- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e proCoq1.NW_012152729v1 2940739 54 + 9850184 I e aotNan1.NW_018500622v1 9280526 312 - 10531588 I e cebCap1.NW_016107433v1 3319828 426 - 5917169 I e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e saiBol1.JH378225 6337934 336 + 6628207 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=19110.000000 s hg38.chr16_GL383557v1_alt 47600 2 + 89672 aa s panTro5.chr16 21482732 2 - 81586097 aa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541183 2 - 90481686 aa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773630 2 + 3010529 aa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884420 2 + 163208435 aa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358694 2 - 74971481 aa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070698 2 - 78541002 aa i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228392 2 + 75399963 aa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6781951 2 - 7209941 aa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525796 2 + 3907144 aa i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338270 2 + 6628207 AA i saiBol1.JH378225 I 336 C 0 s cebCap1.NW_016107433v1 3320254 2 - 5917169 AA i cebCap1.NW_016107433v1 I 426 C 0 s aotNan1.NW_018500622v1 9280838 2 - 10531588 aa i aotNan1.NW_018500622v1 I 312 C 0 s proCoq1.NW_012152729v1 2940793 2 + 9850184 AA i proCoq1.NW_012152729v1 I 54 C 0 s dasNov3.JH569970 924722 2 + 1009443 AA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e mm10.chr8 22469043 392 - 129401213 I e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=90604.000000 s hg38.chr16_GL383557v1_alt 47602 16 + 89672 aGATTATTTTT-AAATA s panTro5.chr16 21482734 16 - 81586097 aGATTATTTTT-AAATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541185 16 - 90481686 aGATTATTTTT-AAATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773632 17 + 3010529 aGATTATTTTTAAAATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884422 16 + 163208435 aaaTTATTTTA-AAATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358696 16 - 74971481 aGATTATTTAA-AAATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070700 16 - 78541002 aaattatttaa-aaata i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228394 16 + 75399963 aGATTATTTAA-AAATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6781953 16 - 7209941 agattatttaa-aaata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525798 16 + 3907144 aGATTATTTAA-AAATA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338272 16 + 6628207 AGATTATTTTT-ACATA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320256 16 - 5917169 AGATTATTTTT-ACATA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280840 16 - 10531588 agattattttt-acata i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2940795 16 + 9850184 AAATTATTTTT-AAATA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22469435 16 - 129401213 aggttagctcc-aaatt i mm10.chr8 I 392 C 0 s dasNov3.JH569970 924724 9 + 1009443 -ATTTAATTT------- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80464203 0 + 88915250 C e micMur3.chr20 54931475 54 + 72247402 I e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=15263.000000 s hg38.chr16_GL383557v1_alt 47618 13 + 89672 T--------GTCCATAAAAAA s panTro5.chr16 21482750 13 - 81586097 T--------GTCCATAAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541201 12 - 90481686 T--------GTCCAT-AAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773649 13 + 3010529 T--------GTCCATTAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884438 11 + 163208435 T--------GTCCAT--AAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358712 11 - 74971481 T--------GTCAAT--AAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070716 13 - 78541002 t--------gtcaataaaaaa i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228410 13 + 75399963 T--------GTCAATAAAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6781969 11 - 7209941 t--------gtcaat--aaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525814 11 + 3907144 T--------GTCAAT--AAAA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338288 9 + 6628207 T--------TTCCAT----TA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320272 9 - 5917169 T--------TTCCAT----AA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280856 9 - 10531588 t--------TTCCAT----AA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2940811 13 + 9850184 T--------ATCCATAAAAAA i proCoq1.NW_012152729v1 C 0 I 34 s mm10.chr8 22469451 15 - 129401213 tgctgtgtagccaag------ i mm10.chr8 C 0 C 0 s canFam3.chr5 80464203 10 + 88915250 t--------atCCCT--GAA- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54931475 54 + 72247402 I e dasNov3.JH569970 924733 0 + 1009443 C e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=264010.000000 s hg38.chr16_GL383557v1_alt 47631 39 + 89672 AAAAATCCCCCAACTGTCAAGCTGTATCTGCAAGGCCTT s panTro5.chr16 21482763 39 - 81586097 AAAAATCCCCCAACTGTCAAGCTGTATCTGCAAGGCCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541213 39 - 90481686 AAAAATCCCCCAACTGTCAAGCTGTATCTGCAAGGCCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773662 38 + 3010529 AAAAATCCCCCAACTGTGAAGCTGTATCTGCAAGG-CTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884449 39 + 163208435 AAAAATGCCCCAACTGTCAAGCTGTATCTGCAAGGCCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358723 39 - 74971481 AAAAATCCCCCAACTGTCAAGCTGTATCTACAAGGCCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070729 39 - 78541002 aaaaaTCCCCCAACTGTCAAGCTGTATCTACAAGGCCAT i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228423 39 + 75399963 AAAAATCCCCCAACTGTCAAGCTGTATCTGCAAGGCCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6781980 39 - 7209941 aaaaaTCCCCCAACTGTCAAGCTGTATCTACAAGGCCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525825 39 + 3907144 AAAAATTCCCCAACTGTCAAGCTGTATCTGCAAGGCCTT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338297 39 + 6628207 AAAAATCCCCCAACTATCAAGCTGTATCTGCAAGACTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320281 39 - 5917169 AAAAATCCCCCAACTATCAAGCTGTATCTGCAAGGCCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280865 39 - 10531588 AAAAATCCCCCAACTATCAAGCTGTATCTGCAAGGCCTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22469466 33 - 129401213 aatgaccttCCTGCTTCCAAGGTAAA-----AAGTCCA- i mm10.chr8 C 0 C 0 s canFam3.chr5 80464213 32 + 88915250 --AAATTCCCAATTTATTGAGCTGTTTT-----GGTCCT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54931475 54 + 72247402 I e proCoq1.NW_012152729v1 2940824 34 + 9850184 I e dasNov3.JH569970 924733 0 + 1009443 C e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13705623 274 + 13852661 I a score=105404.000000 s hg38.chr16_GL383557v1_alt 47670 11 + 89672 CCATCAGAAC----C s panTro5.chr16 21482802 11 - 81586097 CCATCAGAAC----C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541252 11 - 90481686 CCATCAGAAC----C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773700 11 + 3010529 CCATCAGAAC----C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884488 11 + 163208435 CCATCAGAAC----C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358762 11 - 74971481 CCATAAGAAC----C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070768 11 - 78541002 CCATAAGAAC----C i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58228462 11 + 75399963 CCATAAGAAC----C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782019 11 - 7209941 CCATAAGAAC----C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525864 11 + 3907144 CCATAAGAAC----C i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338336 11 + 6628207 CCATCAAAAC----G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320320 11 - 5917169 CCATCAGAAC----C i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280904 11 - 10531588 CCATCAGAAC----C i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931529 11 + 72247402 CCATCAGAAC----T i micMur3.chr20 I 54 C 0 s proCoq1.NW_012152729v1 2940858 11 + 9850184 CCATCAGAAC----C i proCoq1.NW_012152729v1 I 34 C 0 s otoGar3.GL873566 13705897 15 + 13852661 ccacaggcaccgagc i otoGar3.GL873566 I 274 C 0 s mm10.chr8 22469499 11 - 129401213 CCTTCATCAC----T i mm10.chr8 C 0 C 0 s canFam3.chr5 80464245 11 + 88915250 CCATCAGAAT----T i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 924733 0 + 1009443 C e macNem1.NW_012011355v1 14467837 1153 + 26466322 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=675803.000000 s hg38.chr16_GL383557v1_alt 47681 61 + 89672 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCCAACTCATTCAGT s panTro5.chr16 21482813 61 - 81586097 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCCAACTCATTCAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541263 61 - 90481686 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCCAACTCATTCAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773711 62 + 3010529 GAAATGAACTTTTCAACATTGCCCTTTCATCACTACCTTCAGATGAGCCCAACTCATTCAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884499 61 + 163208435 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCCAACTCATTCAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358773 61 - 74971481 GAAATGAACTtttcaacattg-cctttcatcactaccttcagatgagccaaactcattcagt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070779 61 - 78541002 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCAAACTCATTCAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14468990 61 + 26466322 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCAAACTCATTCAGT i macNem1.NW_012011355v1 I 1153 C 0 s chlSab2.chr5 58228473 61 + 75399963 AAAATGAACTTTTCAACACTG-CCTTTCATCACTACCTTCAGATGAGCCAAACTCATTCAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782030 61 - 7209941 TAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCAAACTCATTCAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525875 61 + 3907144 GAAATGAACTTTTCAACATTG-CCTTTCATCACTACCTTCAGATGAGCCAAACTCATTCAGT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338347 61 + 6628207 AAAATGAACCTTTCAACCTTC-CCTTTCATCACTACTTTCAGATAAGCCAAAAGTGTTTGGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320331 61 - 5917169 AAAATGCACCTTTCAACCTTC-CCTTTCATTACTACTTTTAGATAAACCAAAAGTGTTCGGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280915 61 - 10531588 AAAATGAACCTTTCAACCTTC-CCCTTCATCACTACTTTCAGATAAGCCAAACGCGTTCAGT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931540 61 + 72247402 CAGGTGAGCTTTTCAACATTC-TCTTTCATCAGTACTTTCAGATGGGCCAAACTCATCCAGT i micMur3.chr20 C 0 I 324 s proCoq1.NW_012152729v1 2940869 61 + 9850184 CAGGTGAACTTTTCAACATTC-TCTTTCATCAGTACTTTCAGATGGGCCAAACTCATCCAGT i proCoq1.NW_012152729v1 C 0 I 120 s otoGar3.GL873566 13705912 59 + 13852661 cAAATAAACCTTTCGACATTC-T-TTTTATCATTACATTCAGATGGGCCAAACTCATCTAG- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469510 49 - 129401213 -------GCATTTCCACATTG------AGTCACTACTTTAAGCTCAGATACTCTCACCCAGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80464256 55 + 88915250 ------TAATTTTCAATGTCC-TCTCCCATCACTGTGTTCAGATTAACCATGTTCCTCTAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924733 47 + 1009443 ---------TTTTCAACATTC-TCTTTCATTACTACTTTCACATCTGCCAAACTCAT----- i dasNov3.JH569970 C 0 C 0 e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=795251.000000 s hg38.chr16_GL383557v1_alt 47742 95 + 89672 CAATGTGT-CCCAATGATGTCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACCTCCTGCCTCCTCCGGCCGAATTCCCTTACCACCTAGCAAGC-- s panTro5.chr16 21482874 95 - 81586097 CAATGTCT-CCCAATGATGTCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACCTCCTGCCTCTTCCGGCCGAATTCCCTTACCACCTAGCAAGC-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541324 95 - 90481686 CAATGTCT-CCCAATGATGTCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACCTCCTGCCTCTTCCGGCCGAATTCCCTTACCACCTAGCAAGC-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773773 96 + 3010529 CAATGTCTCCCCAATGATGTCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGATACCTCCTGCCTCCTCCGGCCGAATTCCCTTACCACCTAGCAAGC-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884560 95 + 163208435 CAGTGTCT-CCCAATGATGTTTTGCATGT---TGTC----TAAGTCCTTCTTTCCAGACACCTCCTGCCTCCTCCGGCTGAATTCCCTTACCACCTAGCAAGC-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358834 95 - 74971481 cagtgtct-cccaatgatgccttgcacgt---tGTC----TAAGTCCTTCTTTCCAGACACTTCCTGCCTCCTCTGGCTGAATTCCCTTACCACCTAGCAAGA-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070840 95 - 78541002 CAGTGTCT-CCCAATGATGCCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACTTCCTGCCTCCTCTGGCTGAATTCCCTTACCACCTAGCAAGA-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469051 95 + 26466322 CAGTATCT-CCCAATGATGCCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACTTCCTGCCTCCTCTGGCTGAATTCCCTTACCACCTAGCAAGA-- i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58228534 95 + 75399963 CAGTGTCT-CCCAATGATGCCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACCTCCTGCCTCCTCCAGCTGAATTCCCTTACCACCTAGCAAGA-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782091 95 - 7209941 CAGTGTCT-CCCAATGATGCCTTGCACGT---TGTC----TAAGTCCTTCTTTCCAGACACCACCTGCCTCCTCTGGCTGAATTCCCTTACCACCTAGCAAGA-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 525936 96 + 3907144 CAGTGTCT-CCCAATGATGCCTTGCACGT---TGTCT---TAAGTCCTTCTTTCCAGACACCTCCTGTCTCCTCCGGCTGAATTCCCTTACCACCTAGCAAGA-- i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338408 99 + 6628207 CAGTATTT-CCCAATGATGCCTTGCACAT---TGTCTCTCTAAGTCCTTCTTTCCAGACACCTCCTGCCCCCTTCGACCAAATTCCCTAATTACCTAGCAAGA-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320392 99 - 5917169 CAGTATTT-TCCAATGATGCCTTGCACAT---TGTCTGTCTAAGTCCTTCTTTCCAGACACCTCCTGCCCCCTTTGGCCAAATTCCCTAATTACCTAGCAAGA-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9280976 99 - 10531588 CAGTATTT-CCCAATGATGCCTTGCACAT---TGTCTGTCTAAGTCCTTCTTTCCAGACACCTCCTGCCCCCTTGGGCCAAATTCCCTAATTACCTAGCAGGA-- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13705971 89 + 13852661 ---CATCT-CCCAATGA-----TGCACATTCCTGCC----TAAGTCCTTCCTTCCAT-CACCTCCTGTTCCCGTTGACTACTTTTCCTTCCCAGCTAGCAAGA-- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469559 80 - 129401213 CAGCATTC-TCCAGTGATGCCTCACACATCCATACC----CAGG----CCTTTCAGAACACCTCGGGTACCTT------AAACTCC--------CCAGCAAGA-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80464311 67 + 88915250 TGGTGTTC-CCCGATGA---------------GGCC---------------ATCCAAACACCTCCTGCTCCT-----CTCAACTACTTTCCCACATGGCAAGA-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924780 66 + 1009443 CAATGTCT-CCCAATGA---------------TGCC---------------TTCCAAACA---CCTGCCCCCTTCAACCTCATTCC-----CACTTAGCAAGATC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54931601 324 + 72247402 I e proCoq1.NW_012152729v1 2940930 120 + 9850184 I e cerAty1.NW_011999143v1 20788197 1844 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=368935.000000 s hg38.chr16_GL383557v1_alt 47837 33 + 89672 TTTCATTTCAGCTTTG-CCTGACTCCTCAG-TTCA s panTro5.chr16 21482969 33 - 81586097 TTTCATTTCAGCTTTG-CCTGACTCCTCAG-TTCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541419 33 - 90481686 TTTCATTTCAGCTTTG-CCTGACTCCTCAG-TTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773869 34 + 3010529 TTTCATTTCAGCTTTG-CCTGACTACTCAGTTTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884655 33 + 163208435 TTTCATTTCAGCTTGG-CCTGACTACTCAG-TTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358929 33 - 74971481 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070935 33 - 78541002 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469146 33 + 26466322 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20790041 33 + 43916225 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i cerAty1.NW_011999143v1 I 1844 C 0 s chlSab2.chr5 58228629 33 + 75399963 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782186 33 - 7209941 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526032 33 + 3907144 TTTCATTTCAGCTTTG-CCTGACTACTCAG-TTCA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338507 33 + 6628207 TTTCATTTCCGCTTTC-CCTGACTACTCAG-TTCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320491 33 - 5917169 TTTCATTTCAGCTTTC-CCTGACTACTCAG-TTCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281075 33 - 10531588 TTTCATTTCAGCTTTC-CTTGACTACTCAG-TTCA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13706060 31 + 13852661 TCTCATTTCAGCTTT---CTGACTACCCAG-GTAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469639 33 - 129401213 CCTCATCCCAGCTTTC-TGTGACTCCCTAA-GTCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80464378 33 + 88915250 TCTCATCCTCGGTTTC-CCTGTCTACCCAA-TATG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924846 34 + 1009443 TTTTATCCCAGCTTTCTCTTAACCACTCAA-CTAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54931601 324 + 72247402 I e proCoq1.NW_012152729v1 2940930 120 + 9850184 I e calJac3.chr20 21530311 10 - 44557958 I a score=44824.000000 s hg38.chr16_GL383557v1_alt 47870 4 + 89672 TT-GG- s panTro5.chr16 21483002 4 - 81586097 TT-GG- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541452 4 - 90481686 TT-GG- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773903 5 + 3010529 TTGGG- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884688 4 + 163208435 TT-GG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358962 4 - 74971481 TT-GG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070968 4 - 78541002 TT-GG- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469179 4 + 26466322 TT-GG- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20790074 4 + 43916225 TT-GG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228662 4 + 75399963 CT-GG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782219 4 - 7209941 TT-GG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526065 4 + 3907144 TT-GG- i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6338540 4 + 6628207 TT-AA- i saiBol1.JH378225 C 0 I 976 s cebCap1.NW_016107433v1 3320524 4 - 5917169 TT-GG- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281108 4 - 10531588 TT-GG- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2941050 4 + 9850184 tt-gg- i proCoq1.NW_012152729v1 I 120 C 0 s otoGar3.GL873566 13706091 4 + 13852661 TT-GG- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469672 4 - 129401213 TT-GG- i mm10.chr8 C 0 C 0 s canFam3.chr5 80464411 4 + 88915250 CT-GG- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924880 4 + 1009443 -T-GGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54931601 324 + 72247402 I e calJac3.chr20 21530311 10 - 44557958 I a score=30793.000000 s hg38.chr16_GL383557v1_alt 47874 3 + 89672 GAa s panTro5.chr16 21483006 3 - 81586097 GAa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541456 3 - 90481686 GAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773908 3 + 3010529 GAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884692 3 + 163208435 GAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21358966 3 - 74971481 GAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070972 3 - 78541002 GAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469183 3 + 26466322 GAa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20790078 3 + 43916225 GAa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228666 3 + 75399963 GAa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782223 3 - 7209941 GAa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526069 3 + 3907144 GAA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339520 3 + 6628207 gaa i saiBol1.JH378225 I 976 C 0 s cebCap1.NW_016107433v1 3320528 3 - 5917169 GAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281112 3 - 10531588 GAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2941054 3 + 9850184 gat i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13706095 3 + 13852661 GAT i otoGar3.GL873566 C 0 I 4 s mm10.chr8 22469676 3 - 129401213 GGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80464415 3 + 88915250 GAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924884 3 + 1009443 TAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54931601 324 + 72247402 I e calJac3.chr20 21530311 10 - 44557958 I a score=3869827.000000 s hg38.chr16_GL383557v1_alt 47877 247 + 89672 ttttcctttgaacaatttaattctgttcct-ggcttgtttgg-ccaagtagat---tataaactacaggagggcagggaccacccatcaacttatatttattccccactattccaaaaagattac--cttgcagagaaggaactcattaaacatatgattgattgaGATTCAGTGCCTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA s panTro5.chr16 21483009 247 - 81586097 ttttcctttgaacaatttaattctgttcct-ggcttgtttgg-ccaagtagat---tataaactacaggagggcagggaccacccatcaacttatatttattccccactattccaaaaagattac--cttgcagagaaggaactcattaaacatatgattgattgaGATTCAGTGCCTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541459 247 - 90481686 TTTTCCTTTGAACAATTTAATTCtgttcct-ggcttgtttgg-ccaagtagat---tataaactacaggagggcagggaccacccatcaacttatatttattccccactattccaaaaagattac--cttgcagagaaggaactcattaaacatatgattgattGAGATTCAGTGCCTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 773911 248 + 3010529 TTTTCCTTTGAACAATTTAATTCtgttcct-ggcttgtttggcccaagtagat---tataaactacaggagagcagggaccacccatcaacttatatttattccccactattcgaaaaagattac--cttgcagagaaggaactcattaaacatatgattgattGAAATTCAGTGCCTTCTGCGCTACAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53884695 247 + 163208435 TTTTCCTTTGAACAGTTTAATTCTGTTCCT-GGCTTGTCTGG-CCAAGTAGAT---TATAAACTACAGGAGGGCAGGGACCACCCATCAACTTATATTTATTCCCCACTATTCCAAAAAGATTAC--CTTGCAGAGAAGGAACTCATTAAACATATGATTGATTGAAATTCAGTGCCTTCTGCACTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i nomLeu3.chr2 C 0 I 304 s rheMac8.chr20 21358969 247 - 74971481 TTTTCCTTTGAACAATTTAATTCtgttcct-ggcttgtttgg-ccaagtagat---tataaaatacaggagggcagggaccactcatcaacttatatttattccccactattccaaaactattac--cttgcagagaaggaactcattaaacatatgattgattGAAATTCGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21070975 247 - 78541002 TTTTCCTTTGAACAATTTAATTCTGTTCCT-GGCTTGTTTGG-CCAAGTAGAT---TATAAAATACAGGAGGGCAGGGACCACTCATCAACTTATATTTATTCCCCACTATTCCAAAACTATTAC--CTTGCAGAGAAGGAACTCATTAAACATATGATTGATTGAAATTCGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469186 247 + 26466322 ttttcctttgaacaatttaattctgttcct-ggcttgtttgg-ccaagtagat---tataaaatacaggagggcagggaccactcatcaacttatatttattccccactattccaaaactattac--cttgcagagaaggaactcattaaacatatgattgattgaaATTCGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTTGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20790081 247 + 43916225 ttttcctttgaacaatttaattctgttcct-ggcttgtttgg-ccaagtaaat---tataaaatacaggagggcagggaccactcatcaacttatatttattccccactattccaaaactattac--cttgcagagaaggaactcattaaacatatgattgattgaaATTCGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58228669 247 + 75399963 ttttcctttgaacaatttaattctgttcct-ggcttgtttgg-ccaagtagat---tataaactacaggagggcagggaccactcatcaacttatatttattccccactattccaaaactattac--cttgcagagaaggaactcattaaacatatgattgattgaaATTCGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782226 247 - 7209941 ttttcctttgaacaatttaattctgttcct-ggcttgtttgg-ccaagtagat---tataaaatacaggagggcagggaccactcatcaacttatatttattccccactattccaaaactattac--cttgcagagaaggaactcattaaacatatgattgattgaaATTCGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526072 244 + 3907144 TTTTCCTTTGAACAATTTAATTCtgttcct-gggttgtgtgg-ccaagtagat---tataaactacaggagggc---gaccactcatcaacttatatttattccccactattccaaaactattac--cttgcagagaaggaactcattaaacatatgattgattGAAATTTGGTACTTTCTGCGCTATAGTCCTTTCAAATAATTCCTCTGAAGGTTATTGGTTCCTTGCAGAGTGAAAATTACCATGTAGGAA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339523 245 + 6628207 TCTTCCTCTGAACAATTCAATtctgttcct-gactggtttgc-ccaaatagat---tatgaactacaggagggcagggaccacccatcaacttatatttgttccccaCTATTCCAAAAATATTGC--CTTGCAGAGAAGGAACTCATTAAAC--ATGATTGATTGAAATTCAGTGCCTTCTGTGCTGTAGCCTTTTCAAATAATTTCTCTGAAGGTTACTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320531 245 - 5917169 TCTTCCTCTGAACAATttatttctgttcct-gactggtttgc-ccaaatagat---tatgaactacaggagggcagggaccacccatcaacttatatttgttccccactattccaaaaatattgc--cttgcagagaaggaactcattaaac--atgattgattGAAATTCAGTGCCTTCTGTGCTGTAGCCTTTTCAAATAATTTCTCTGAAGGTTACTGGTTTCTTGCAGAGTGAAAATTACCATCTAGGAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281115 245 - 10531588 TTTTCCTCTAAACAATATAATTCtgttgct-gactggtttgc-ccaaatagat---tatgaactacaggagggcagggaccacccatcaacttatatttgttccccactattccaaaaatattgc--cttgcagagaaggaactcattaaac--atgattgattGAAATTCAGTGCCTTCTGTGCTGTAGCCTTTTCAAATAATTTCTCTGAAGGTTACTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54931925 250 + 72247402 TTTTCCTTTGAACGAtttcattctctgtct-agctggtctgc-ccaagtagattactacaaacgacaggaggacagggaccacccatcaacttctttttatttcccattattctaaaaatattgc--cttgcagagaaggaactcattaaacctgtgattgattgaaatacagtgcctcccgcactgtagtcctttcaaataatccctgcgaaggttattggtttcttgcagagtgaaaattaccatctaggaa i micMur3.chr20 I 324 C 0 s proCoq1.NW_012152729v1 2941057 247 + 9850184 ttttcctttgaacgatttaattctctgtct-ggctggtttgc-ccaagtagat---tacaaactacaggagggcagggaccacccgtcaacttatttttattccccattattctaaaaatattgc--cttgcagagaaggaactcattaaacatgtgattgattgaaATTCAGTGCCTCCTGCACTGTAGTCTTTTCAAATAATCCCTCCGAAGGTTATTGGTTTCTTGCAGAGTGAAAATTACCATCTAGGAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13706102 243 + 13852661 TTTTCCTTTGAATGATTTAAATCTATGTCt-ggctggtttgc-ccaactagat---tacaaactacaggagagcggggaccacctatcaatttacttttgtttcctactcttccaaaattattgc--cttgcagagaaggaactcattaaacatg----tgattgaaATTCAGTGCTTCCTGCACTGTAGTCTTTTCAAATAATTCCTCTGAAGGTTATTGGTTTCTTGCAGAGTGAAAATTACCATCTAGGAA i otoGar3.GL873566 I 4 C 0 s mm10.chr8 22469679 248 - 129401213 TTTTCCTTTGAATGATGTAATTCTAGGCCTCTGCTGGAATGC-CCAATTAAGT---TATATATTCCAGGAAGGCGAAGACCACCTATGGA-TTATTTTTGCTTCCCACTGCTTGGAAACTACTGCCTCTCGCAGAGAGGAAACTCATTAAGCTTGTGACTGATTGGCA-GCGGTGCTTCCGGTGCCAGCGTCTTCTCAAATAATCCCTATGAGAGTTATTGGTTCCTCACAGAGCAAAAATTACCATCTAGGAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80464418 247 + 88915250 TTTTCCTTTGAACAACTTTATTCTTTGCCT-GCCTGTTTTGC-CTAAGTAGGT---TATAAAATACAGGAGGGCAAGGACCACCCATTGACTCCTTTTCAATCCCCACTATTCCAAAAATATTGC--CTTGCTGAGAAGGAACTCATTAAACATGTGATTAATTGAAATTCAGTGCCTCCTGTGCTGTAGTCATTTCACATAATCCCTCTGAAGGTTACTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 924887 226 + 1009443 TTTTCCTTTGA----TTTTATCCTTTGCCT-GGCT--TTTGC-CCAAGTAGAT---TATAAACTATAGGAAGACAAGGATCACCCACTGACTTA-------TTCCCACTATTCCAAACCTACTGC--CTTGCACAGAAAGAACTCAACACA--------TAACTGAAATTCAGTACTTCTCATACTGTAGTCTTTTCAGATAATCCCTATGGCAGTTACTGGTTCCTTGCAGAGTGAAAATTACCATCTAGGAA i dasNov3.JH569970 C 0 C 0 e calJac3.chr20 21530311 10 - 44557958 I a score=159877.000000 s hg38.chr16_GL383557v1_alt 48124 12 + 89672 ATCTCAAGGAGT s panTro5.chr16 21483256 12 - 81586097 ATCTCAAGGAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541706 12 - 90481686 ATCTCAAGGAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774159 12 + 3010529 ATCTCAAGGAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885246 12 + 163208435 ATCTCAAGGAGT i nomLeu3.chr2 I 304 C 0 s rheMac8.chr20 21359216 12 - 74971481 ATTGCAAGGAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071222 12 - 78541002 ATTGCAAGGAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469433 12 + 26466322 ATTGCAAGGAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20790328 12 + 43916225 ATTGCAAGGAGT i cerAty1.NW_011999143v1 C 0 I 180 s chlSab2.chr5 58228916 12 + 75399963 ATTGCAAGGAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782473 12 - 7209941 ATTGCAAGGAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526316 12 + 3907144 ATTGCAAGGCGT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339768 12 + 6628207 ATCTCAGGGAGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320776 12 - 5917169 ATCTCAGGGAGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281360 12 - 10531588 ATCTCAGGGAGT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932175 12 + 72247402 atctcaagtaGT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2941304 12 + 9850184 ATCTCAAGTAGT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13706345 12 + 13852661 ATCTCAAGTAGT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469927 12 - 129401213 ATTTCAAGTAGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80464665 12 + 88915250 ATCTCAAGTAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 925113 9 + 1009443 ATCTCAAGA--- i dasNov3.JH569970 C 0 C 0 e calJac3.chr20 21530311 10 - 44557958 I a score=701285.000000 s hg38.chr16_GL383557v1_alt 48136 50 + 89672 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAAGAGCG s panTro5.chr16 21483268 50 - 81586097 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAAGAGCG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541718 50 - 90481686 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAAGAGCG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774171 50 + 3010529 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAAGAGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885258 50 + 163208435 CTGTGGAAATCTACGTACTGTGGATAATGAAATCT-GAAATAAAAAGAGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359228 50 - 74971481 CAGTGGAAATCTACTTACTGTGGATAATAAAATCT-GAAATAAAAAGAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071234 50 - 78541002 CAGTGGAAATCTACTTACTGTGGATAATAAAATCT-GAAATAAAAAGAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469445 50 + 26466322 CAGTGGAAATATACTTACTGTGGATAATAAAATCT-GAAATAAAAAGAGTT i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58228928 50 + 75399963 CAGTGGAAATCTACTTACTGTGGATAATAAAATCT-GAAATAAAAAGAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782485 50 - 7209941 CAGTGGAAATCTACTTACTGTGGATAATAAAATCT-GAAATAAAAAGAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526328 50 + 3907144 CAGTGGAAATCTACTTACTGTGGATAATAAAATCT-GAAATAAAAAGAGTT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339780 50 + 6628207 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAACAGTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320788 51 - 5917169 CAGTGGAAATCTACTTACTGTGGATAATGAAATCTGGAAATAAAAACAGTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281372 50 - 10531588 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAACAGTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932187 50 + 72247402 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAAGAGTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2941316 50 + 9850184 CAGTGGAAATCTACTTACTGTGGATAATGAAATCT-GAAATAAAAAGAGTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13706357 45 + 13852661 CAGTGGAAATCTACATACTGTGGATAATG-----T-GAAATAAAAAGAATA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469939 45 - 129401213 -TGGTGAAATATACTTAGTGTGCATAATGAAATCT-GAAAC----AGGGTA i mm10.chr8 C 0 C 0 s canFam3.chr5 80464677 50 + 88915250 CAGTGGAAATCTATGTACTGTGGATAATGAAATCT-GAAATAAAAAGCGTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 925122 46 + 1009443 -AGTGAAAATATACTTACTATGGATAATGAAACCT-AAAATAAAAATA--- i dasNov3.JH569970 C 0 C 0 e cerAty1.NW_011999143v1 20790340 180 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=429590.000000 s hg38.chr16_GL383557v1_alt 48186 26 + 89672 CACATCTGTTTCCACAGTTTCTTAAG s panTro5.chr16 21483318 26 - 81586097 CACATCTGTTTCCACAGTTTCTTAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541768 26 - 90481686 CACATCTGTTTCCACAGTTTCTTAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774221 26 + 3010529 CACATCTGTTTCCACAGTTTCTTAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885308 24 + 163208435 CACATCTGTTTC--CAGTTTCTTAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359278 26 - 74971481 CACATCTGTTTCCGCAGTTTCTTAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071284 26 - 78541002 CACATCTGTTTCCGCAGTTTCTTAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469495 26 + 26466322 CACATCTGTTTCCGCAGTTTCTTAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20790520 26 + 43916225 CACATCTGTTTCCGCAGTTTCTTAAG i cerAty1.NW_011999143v1 I 180 I 965 s chlSab2.chr5 58228978 26 + 75399963 CACATCTGTTTCCGCAGTTTCTTAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782535 26 - 7209941 CACATCTGTTTCCGCAGTTTCTTAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526378 26 + 3907144 CATATCTGTTTCCACAGTTTCTTAAG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339830 26 + 6628207 CACATCTGTTTCTACAGTTTCTTAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320839 26 - 5917169 CACATCTGTTTCTACAGTTTCTTAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281422 26 - 10531588 CACATCTGTTTCTACAGTTTCTTAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932237 26 + 72247402 CACATCTGTTTCCACGGTTTCACAAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2941366 26 + 9850184 CACATCTGTTTCCACAGTTTCTGAAG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13706402 26 + 13852661 CACATCTGTTTCCATAGTTCCTTAAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22469984 26 - 129401213 CACATCTGTTTTCATGGGTTCCTAAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80464727 26 + 88915250 CACATCTGTTACCATGGTTTCTTAGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 925168 26 + 1009443 CACATCTGTTTCCACAGTTCCTTAAA i dasNov3.JH569970 C 0 C 0 e calJac3.chr20 21530311 10 - 44557958 I a score=681122.000000 s hg38.chr16_GL383557v1_alt 48212 63 + 89672 GACAGTGAGACAAGCTATGATCACTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA s panTro5.chr16 21483344 63 - 81586097 GACAGTGAGACAAGCTATGATCACTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541794 63 - 90481686 GACAGTGAGACAAGCTATGATCACTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774247 62 + 3010529 GAC-GTGAGACAAGCTATGATCACTCTT----TGAAGAGTCATGTTAC----TTTACCTCTGAAAAAAGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885332 63 + 163208435 GACAGTGAGACAAGCTACGATCATTCTT----TTAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359304 63 - 74971481 GACAGCGAGACAAGCTAAGATCATTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071310 63 - 78541002 GACAGCGAGACAAGCTAAGATCATTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469521 63 + 26466322 GACAGCGAGACAAGCTAAGATCATTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58229004 63 + 75399963 GACAGCGAGACAAGCTAAGATCATTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782561 63 - 7209941 GACAGCGAGACAAGCTAAGATCATTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526404 63 + 3907144 GACAGCGAGACAAGCTAAGATCATTCTT----TGAAGAGTCATGTTAC----TTTACCTCTAAAAAAAGGA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339856 62 + 6628207 GAGAGCAAGACAAGCTA-----ATTCTT----TGAAGAATCATGTTACTTTATCTACCTCTAAAAAACGGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320865 61 - 5917169 GAGAGCGAGACCAGCTA-----ATTCTT----TGAAGAATCATGTTAC-TTATCTACCTCTAAAAAAAGGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281448 62 - 10531588 GAGAGAGAGACAAGCTA-----ATTCTT----TGAAGAATCATGTTACTTTATCTACCTCTAAAAAAAGGA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932263 67 + 72247402 GACAGCAAGACAAGCTTAGATAATTCTT----TGAACTGGCATGTTACTGTATCTGCCTCTAAAAAAAGGA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2941392 67 + 9850184 GACAGCAAGACAAGCTTAGATAATTCTT----TGAACTGGCATGTTATTGTATCTACCTCTAAAAAAAGGA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13706428 65 + 13852661 GCCAG--AGATAAGCTTAGATAATTCTTCCAATGAATGGGCATGGTATTTTATCTACTTTT----AAAGGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22470010 67 - 129401213 GGCAGGGAGACAagcttagagaattctt----caagcaagcattttattttatctacctctaaaagaggga i mm10.chr8 C 0 I 1164 s canFam3.chr5 80464753 66 + 88915250 GACAGAGAGACTAGCCTAGATAATTCTC----TAAACAGGCATGTTATTTTATCTACCTCCAAAAAAGAA- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 925194 59 + 1009443 GACAGTAAG-CCAGTTTAGATAATTCTT----TGGAAAGACATTTTA-----TCTAACTCTAAAAAGGA-- i dasNov3.JH569970 C 0 C 0 e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=91668.000000 s hg38.chr16_GL383557v1_alt 48275 6 + 89672 AATGGC s panTro5.chr16 21483407 6 - 81586097 AATGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541857 6 - 90481686 AATGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774309 6 + 3010529 AATGGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885395 6 + 163208435 AATGGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359367 6 - 74971481 AATGGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071373 6 - 78541002 AATGGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469584 6 + 26466322 AATGGC i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58229067 6 + 75399963 AATGGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782624 6 - 7209941 AATGGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526467 6 + 3907144 AATGGC i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339918 6 + 6628207 AATGGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320926 6 - 5917169 AATGGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281510 6 - 10531588 AATGGC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932330 6 + 72247402 AATGGC i micMur3.chr20 C 0 I 523 s proCoq1.NW_012152729v1 2941459 6 + 9850184 AATGGC i proCoq1.NW_012152729v1 C 0 I 459 s otoGar3.GL873566 13706493 6 + 13852661 AATGGC i otoGar3.GL873566 C 0 I 452 s canFam3.chr5 80464819 6 + 88915250 AATGGC i canFam3.chr5 C 0 I 1005 s dasNov3.JH569970 925253 6 + 1009443 AATGGC i dasNov3.JH569970 C 0 I 509 e mm10.chr8 22470077 1164 - 129401213 I e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I a score=830370.000000 s hg38.chr16_GL383557v1_alt 48281 110 + 89672 ggccaggcacagtggctca-cacctgtaatcccagcacttt-gggaggccgaggcaggcagatcgcttgaggccaggagtttgtgaccagcctggccaacatgatgaaacct s panTro5.chr16 21483413 110 - 81586097 ggccaggcacagtggctca-cacctgtaatcccagcacttt-gggaggccgaggcgggcagatcgcttgaggccaggagtttgtgaccagcctggccaacatgatgaaacct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541863 110 - 90481686 ggccaggcacagtggctca-cacctgtaatcccagcacttt-gggaggccgaggcgggcagatcgcttgaggccaggagtttgtgaccagcctggccaacatgatgaaacct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774315 111 + 3010529 ggccgggcacagtggctca-cacctgtaatcccagcactttggggaggccgaggcgggcagatcgcttgaggccaggagtttgtgaccagcctggccaacatgatgaaacct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885401 110 + 163208435 ggccgggcacagtggctca-cacctgtaatcccagcacttt-gggaggccgaggcgggcagatcgcttgaggccaggagtttgagaccagcctggccagcatggtgaaacct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359373 110 - 74971481 ggctgggcacagtggctca-cacctgtaatcccagcacttt-gggagaccaaggtgggcagattgcttgaggccaagagtttgagaccagcctagccaacatggtgaaacct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071379 110 - 78541002 ggctgggcacagtggctca-cacctgtaatcccagcacttt-gggagaccaaggtgggcagattgcttgaggccaagagtttgagaccagcctagccaacatggtgaaacct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469590 110 + 26466322 ggctgggcacagtggctca-cacctgtaatcccagcacttt-gggagaccaaggtgggcagattgcttgaggccaagagtttgagaccagcctagccaacatggtgaaacct i macNem1.NW_012011355v1 C 0 T 1502 s chlSab2.chr5 58229073 110 + 75399963 ggctgggcacagtggctca-cacctgtaatcccagcacttt-gggagatcaaggcgggcagattgcttgaggccaagagtttgagaccagcctagccaacatggtgaaacct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782630 110 - 7209941 ggctgggcacagtggctca-cacctgtaatcccagcacttt-gggagaccaaggtgggcagattgcttgaggccaagagtttgagaccagcctagccaacatggtgaaacct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526473 110 + 3907144 ggctgggcacagtggctca-cacctgtaatcccagcacttt-gggagaccaaggtgggcagattgcttgaggccaagagtttgagaccagcctggccaacatggtgaaacct i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6339924 111 + 6628207 ggccaggcatagtggctcattacctgtaatcccagcacttt-gggacgttgaggcgggcagattacctgaggccaggagtttgagaccagcctggccaacatagtgaaatcc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3320932 111 - 5917169 Agccaggcatagtggcaaattacctgtaatcccagcacttt-gggaggctgaggcgggcagatcacctgaggccaggagtttgagaccagcttggccaagatagtgaaatcc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281516 110 - 10531588 ggccaggcacagtggctca-tacctgtaatcccagcacttt-gggaggctgaggcgggcagatcacctgaggccaggagtttaagaccagcctggccaacatagtgaaatcc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=1194217.000000 s hg38.chr16_GL383557v1_alt 48391 183 + 89672 tgtctctact-aaaaatacaaaaattag-cctggtgtaggggtgcatgcctataatcccagctactcaggaggctgagggacgagaatcgcttgaactgaggaggcagaggttatagtgagctgagatcacgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaat-aaaT s panTro5.chr16 21483523 183 - 81586097 tgtctctact-aaaaatacaaaaattag-cctggtgtaggggtgcatgcctataatcccagctactcaggaggctgagggacgagaattgcttgaactgaggaggcagaggttatagtgagctgagatcatgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaat-aaaT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21541973 183 - 90481686 tgtctctact-aaaaatacaaaaattag-cctggtgtaggggtgcatgcctataatcccagctactcaggaggctgagggacgagaattgcttgaactgaggaggcagaggttatagtgagctgagatcatgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaat-aaaT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774426 185 + 3010529 tgtctctact-aaaaatacaaaaattagccctggtgtaggggtgcatgcctataatcccagctactcaggaggctgagggacgagaatcgcttgaactgaggaggcagaggttatagtgagccgagatcacgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaataaaaT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885511 184 + 163208435 tgtctctactaaaaaatacaaaaattag-cctggcgtaggggtacatgcctataatcccagctactcaggaggctgagggacgagaatcgcttgaactgaggaggcagaggttatagtgagccgagatcatgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaat-aaaT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359483 183 - 74971481 catctctact-aaaaatacaaaaattag-cgtggtatagtggtgcacgcctataatcccagctactcaggaggctgagggatgagaatcgcttgaaccgaggaggcagaggttatagtgagctgagatcacgccattgcactctagcctgggcaacagagtgagactctgtctcaacaaat-aaaT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071489 183 - 78541002 catctctact-aaaaatacaaaaattag-cgtggtatagtggtgcacgcctataatcccagctactcaggaggctgagggatgagaatcgcttgaaccgaggaggcagaggttatagtgagctgagatcacgccattgcactctagcctgggcaacagagtgagactctgtctcaacaaat-aaaT i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58229183 183 + 75399963 cgtctctact-aaaaatacaaaaattag-cgtggtatagtggtgcacgcctataatcccagctactcaggaggctgagggatgagaatcgcttgaaccgaggaggcagaggttatagtgagctgagatcacgccattgcactttagcctgggcaacagagtgagactctgtctcaacaaat-aaaT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782740 183 - 7209941 cgtctctact-aaaaatacaaaaattag-cgtggtatagtggtgcacgcctataatcccagctactcaggaggctgagggatgagaatcgcttgaaccgagggggcagaggttatagtgagctgagatcacgccattgcactctagcctgggcaacagagtgagactctgtctcaaaaaat-aaaT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526583 183 + 3907144 cgtctctact-aaaaatacaaaacttag-cgtggtgtagtgctgcacgcctataatcccagctactcaggaggctgagggatgagaatcgcttgaaccgaggaggcagaggttatagtgagccgagatcacgccattgcactctagcctgggcaagagagtgagactctgtctcaacaaat-aaaT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340035 183 + 6628207 tgtctctact-agaaatacaaaaattag-cctgatgtggtggtgcacatctgtaatcctagcttctcaggaggctgagggatgagaatcgcttgaacttgggaggcagaggttgtagtgagccaagatcacgccattgtactccagcctgggcaacagagtgagactctgcctcaaaaaat-aaat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321043 183 - 5917169 tgtctctact-agaaatacaaaaattag-cctgatgtggtggtgcatacctgtaatcctagctactcaggaggttgagggatgagaatcacttgaacctgggaggcagaggttgtagtaagccaagatcacgccattgtactccagtctgggcaacagagtgagactctgcctcaaaaaat-aaat i cebCap1.NW_016107433v1 C 0 I 3 s aotNan1.NW_018500622v1 9281626 183 - 10531588 tgtctctact-agaaatacaaaaattag-cctgatgtggtggtgcacacctgtaatcttagctactcaggaggctgaaggatgagaatcgcttgaacctgggaggcagaagttgtagtgagccaagatcatgccattgtactccagcctgggcaacagagtgagactttgcctcaaaaaat-aaat i aotNan1.NW_018500622v1 C 0 I 3 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=12150.000000 s hg38.chr16_GL383557v1_alt 48574 3 + 89672 GAA s panTro5.chr16 21483706 3 - 81586097 GAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542156 3 - 90481686 GAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774611 3 + 3010529 GAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885695 3 + 163208435 GAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359666 3 - 74971481 GAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21071672 3 - 78541002 GAA i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58229366 3 + 75399963 GAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782923 3 - 7209941 GAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526766 3 + 3907144 GGA i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340218 3 + 6628207 taa i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=43086.000000 s hg38.chr16_GL383557v1_alt 48577 16 + 89672 AGggccgggcacggtg s panTro5.chr16 21483709 15 - 81586097 Agg-ccgggcacggtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542159 15 - 90481686 Agg-ccgggcacggtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774614 11 + 3010529 Agg-----gcacggtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885698 16 + 163208435 AGggccgggcacggtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21359669 16 - 74971481 AGGGCCGGGCATGGTG i rheMac8.chr20 C 0 I 828 s macFas5.chr20 21071675 16 - 78541002 AGggccgggcatggtg i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58229369 16 + 75399963 AGggctgggcgtggtg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782926 16 - 7209941 AGggccgggcatggtg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526769 16 + 3907144 AGggctgtgagtggtg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=393625.000000 s hg38.chr16_GL383557v1_alt 48593 136 + 89672 gctcacgcctgtaatccc-gcactttggga-ggccaaggcgggtggatcacaaggtcaggagatcga-gaccatcctggccaacatggtgaaaccccgtttctactaaaaatac---aaaaattagctgggcgtggtggtgc s panTro5.chr16 21483724 137 - 81586097 gctcacgcctgtaatcccagcactttggga-ggccaaggcgggtggatcacaaggtcaggagatcga-gaccatcctggccaacatggtgaaaccccgtttctactaaaaatac---aaaaattagctgggcgtggtggtgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542174 137 - 90481686 gctcacgcctgtaatcccagcactttggga-ggccaaggcgggtggatcacaaggtcaggagatcga-gaccatcctggccaacatggtgaaacccccgtttcactaaaaatac---aaaaattagctgggtgtggtggtgc i panPan2.chr16 C 0 M 541 s gorGor5.CYUI01000018v1 774625 139 + 3010529 gctcatgcctgtaatcccagcactttgagagggccaaggcgggtggatcacaaggtcaggagatcgaggaccatcctggccaacatggtgaaaccccgtttctactaaaaatac---aaaaattagctgggcgtggtggtgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885714 137 + 163208435 gctcacacctgtaatcccagcactttggga-ggccaaggcgggtggattgcaaggtcaggagatcaa-gaccatcctggccaacatggtgaaaccctgtctctactaaaaatac---aaaaattagctgggcgtggtggtgc i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21071691 140 - 78541002 gctcacgcctgtaatcccagcactttggga-ggccgaggtggatggatcacgaggtcaggagatcga-gaccatcctggctaacatggtgaaaccctgtctctactaaaaaaatacaaaaaattagccaggcgaggtggcgg i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58229385 137 + 75399963 gctcacgcctgtaatcccagcactttggga-ggccgaggtggatggatcacgaggtcatgttggcca-tttcaccatggccaacatggtgaaaccccgtctctactaaaaatac---aaaaattagctgggcatggtggtac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6782942 137 - 7209941 gctcacgcctgtaatcccagcactttggga-ggccgaagtggatggatcacgaggtcaggagatcga-gatcatcctggccaacatggtgaaaccccgtctctactaaaaatac---aaaaattagctgggcatggtggtac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526785 137 + 3907144 gctcacgtctgtaatcccagcactttggga-gaccaaggtggatggatcacgaggtcaggagatcga-gatcatcctggccaacatggtgaaaccccatctctactaaaaatac---aaaaattagctgggcatggtggtac i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=75450.000000 s hg38.chr16_GL383557v1_alt 48729 32 + 89672 atgcctataatcccagctactcgggaggctga s panTro5.chr16 21483861 32 - 81586097 gtacctataatcccagctactcgggaggctga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774764 31 + 3010529 gtgcctataatcccagctact-gggagactga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885851 32 + 163208435 gtgcctataatcccagctactcgggaggctga i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21071831 32 - 78541002 gcgcctgtagtcccagctactcgggaggctga i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58229522 32 + 75399963 gtgcctataatcccagctacttgggaggctga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783079 32 - 7209941 gtgcctataatcccagctacttgggaggctga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 526922 32 + 3907144 gtgcctataatcccagctacttgggaggctga i colAng1.NW_012123265v1 C 0 M 325 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e panPan2.chr16 21542311 541 - 90481686 M e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=194619.000000 s hg38.chr16_GL383557v1_alt 48761 123 + 89672 ggcaggagaatcgcttgaaccagggagttagaggttgcagtgagccgagattgcgccactgcactccagcctggcgaa-agagtgagactccatctcaaaaagtaaat---------aacaaaataaaaataa s panTro5.chr16 21483893 123 - 81586097 ggcaggagaatcgcttgaaccagggagttagaggttgcagtgagccgagattgcgccactgcactccagcctggcaaa-agagtgagactccatctcaaaaagtaaat---------aacaaaataaaaataa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774795 123 + 3010529 ggcaggagaatcgcttgaaccagggagttagaggttgcagtgagccgagattgcgccactgcactccagcctggcgaa-agagtgagactccatctcaaaaagtaaat---------aacaaaataaaaataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53885883 123 + 163208435 ggcgggagaatcacttgaaccaggaagttagaggtttcagtgagccgagattgcgccactgcactccagcctggcgaa-agagcgagactccatctcaaaaaataaat---------aacaaaataaaaataa i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21071863 124 - 78541002 ggcaggagaatggcctgaacccgggaggcggagcttgcagtgagctgagatccggccactgcactccagcaagggggacagagtgagactccgtctcaaaaaaacaaa---------aacaaaaacaaaaaaa i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58229554 132 + 75399963 agcaggaaaattgcttgaaccagggagtcagaggttgcagtgagctgagattgcgccactgcactccagcctggtgaa-agagcgagactccatctcaaaaaaataaacaaataaaaaacaaaataaaaataa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783111 128 - 7209941 agcaggaaaatcacttgaaccagggagtcagaggttgcagtgagctgagattgcgccactgcactccagcctggtgaa-agagcgagactccatctcaaaaaaataaacaaat----aacaaaataaaaataa i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e panPan2.chr16 21542311 541 - 90481686 M e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e colAng1.NW_012123265v1 526954 325 + 3907144 M e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=210488.000000 s hg38.chr16_GL383557v1_alt 48884 172 + 89672 aaataaat-aaaaaataaaggctggacacagtggttcacacctgcaatcccagtactttgggaggctgaggcgggctgatcatgaggtcaggagatcga-gactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaccccacttctactaaaaacacac------ s panTro5.chr16 21484016 172 - 81586097 aaataaat-aaaaaataaaggctggacacagtggttcacacctgcaatcccagtactttgggaggctgaggcgggctgatcgtgaggtcaggagatcga-gactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaccccgtttctactaaaaacacac------ i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 774918 174 + 3010529 aaataaataaaaaaataaaggctggacacagtggttcacacctgcaatcccagtactttgggaggctgaggcgggctgatcatgaggtcaggagatcgaggactatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaccccgtttctactaaaaacacac------ i gorGor5.CYUI01000018v1 C 0 I 1 s nomLeu3.chr2 53886006 172 + 163208435 aaataaat-gaaaaataaaggctggacacagtggttcacacctgcaatcccagtactttgggaggctgaggcaggctgatcacgaggtcaggagatcga-gactatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaccccgtttctactaaaaacacac------ i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58229686 177 + 75399963 aaataaat-aaaaaataaaggctgggcgcagtggctcacacctgcaat-ccagtactttgggaggccgaggcaggctgatcacacggtcaggagattga-gactatcctggctaacatattgaaaccccatctctactaaaaatacaaaaaccccatttctactaaaaatacaaaaaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783239 173 - 7209941 ----aaat-aaaaaataaaggctgggcgcagtggttcacacctgcaatcccagtactttgggaggccgaggcaggctgatcacacggtcaggagatcga-gactatcctggctaacatattgaaaccccatctctactaaaaatacaaaaaccccatttctactaaaaatac-cacaaaa i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e panPan2.chr16 21542311 541 - 90481686 M e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 526954 325 + 3907144 M e cerAty1.NW_011999143v1 20790546 965 + 43916225 I e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=90392.000000 s hg38.chr16_GL383557v1_alt 49056 49 + 89672 aaaaaaattagctgggcatggtggcatgcacctgtagtcccagctactc s panTro5.chr16 21484188 49 - 81586097 aaaaaaattagccgggcgtggtggcatgcacctgtagtcccagctactc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775093 49 + 3010529 aaaaaaattagccgggcttggtagcatgcacctgtagtcccagctactc i gorGor5.CYUI01000018v1 I 1 C 0 s nomLeu3.chr2 53886178 49 + 163208435 aaaaaaattagccgggtgtggtggcatgcacctgtagtcccagctactt i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791511 49 + 43916225 aaaaaaattagcctggcatggtggcatgcacctgtagtcccagctactc i cerAty1.NW_011999143v1 I 965 C 0 s chlSab2.chr5 58229863 49 + 75399963 aaaaaaattagcctggcatggtggcatgcacctgtagtcccagctactc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783412 49 - 7209941 aaaaaaattagcctggcatggtggcatgcacctgtagtcccagctactc i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e panPan2.chr16 21542311 541 - 90481686 M e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 526954 325 + 3907144 M e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=54001.000000 s hg38.chr16_GL383557v1_alt 49105 24 + 89672 agaaggcttaggcaggagaattgc s panTro5.chr16 21484237 24 - 81586097 agaaggcttaggcaggagaattgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542858 24 - 90481686 Agaaggcttaggcaggagaattgc i panPan2.chr16 M 541 C 0 s gorGor5.CYUI01000018v1 775142 24 + 3010529 agaaggcttaggcaggagaattgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886227 24 + 163208435 ggaaggctgaggcaggagaattac i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791560 24 + 43916225 agaaggctgaggcagcagaactgc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58229912 24 + 75399963 agaaggctgaggcagcagaactgc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783461 24 - 7209941 agaaggctgaggcagcagaactgc i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 526954 325 + 3907144 M e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=282282.000000 s hg38.chr16_GL383557v1_alt 49129 103 + 89672 ttgaacctgggaggcggaggttgcagtgagccgagatcgtgctactgcactccagcctgggggacagagcaagactccatctcaaataaataaataaataaat s panTro5.chr16 21484261 103 - 81586097 ttgaacctgggaggcggaggttgcagtgagccgagatcgtgctactgcactccagcctgggggacagagcaagactccatctcaaataaataaataaataaaT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542882 103 - 90481686 ttgaacctgggaggcggaggttgcagtgagccgagatcgtgctactgcactccagcctgagggacagagcaagactccatctcaaataaataaataaataaaT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775166 99 + 3010529 ttgaacctgggaggtggaggttgcagtgagccgagatcgtgctactgcactccagcctgggcgacagagcaagactccatctcaaataaataaataaaT---- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886251 101 + 163208435 ttgaacctgggaggtggaggttgcagtgagccgagatagtgctactgcactccagcctgggcgacagagcaagactccatctcaa--aaataaataaataaat i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791584 98 + 43916225 ttgaacctgggaggcggaggttgcagtgagccaagatcgtgccattgcacaccagcctgggcaacagagcaagactccatctcaaaaaaataaataaa----- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58229936 98 + 75399963 ttgaacctgggaggcggaggttgcagtgagccaagatcatgccactgcacaccagcctgggcaacagagcaagattccatctcaaaaaaataaataaa----- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783485 98 - 7209941 ttgaacctgggaggcggaggttgcagtgagccaagatcgtgccattgcacaccagcctgggcaacagagcaagactccatctcaaaaaaataaataaa----- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527284 94 + 3907144 ttgaatctgggaggtggaggttgcagtgagccaagattgtgccactgcacaccagcctgggcaatagagcaagagtccatctcaaaa----aaataaa----- i colAng1.NW_012123265v1 M 325 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9281809 3 - 10531588 I e cebCap1.NW_016107433v1 3321226 3 - 5917169 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e saiBol1.JH378225 6340221 0 + 6628207 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=1092.000000 s hg38.chr16_GL383557v1_alt 49232 2 + 89672 aa s saiBol1.JH378225 6340221 2 + 6628207 aa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321229 2 - 5917169 aa i cebCap1.NW_016107433v1 I 3 C 0 s aotNan1.NW_018500622v1 9281812 2 - 10531588 aa i aotNan1.NW_018500622v1 I 3 C 0 e canFam3.chr5 80464825 1005 + 88915250 I e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e panPan2.chr16 21542985 0 - 90481686 C e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 527378 0 + 3907144 C e manLeu1.NW_012101698v1 6783583 0 - 7209941 C e chlSab2.chr5 58230034 0 + 75399963 C e cerAty1.NW_011999143v1 20791682 0 + 43916225 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I e nomLeu3.chr2 53886352 0 + 163208435 C e gorGor5.CYUI01000018v1 775265 0 + 3010529 C e panTro5.chr16 21484364 0 - 81586097 C a score=1746.000000 s hg38.chr16_GL383557v1_alt 49234 3 + 89672 aTG s panTro5.chr16 21484364 1 - 81586097 --G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542985 1 - 90481686 --G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775265 1 + 3010529 --G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886352 1 + 163208435 --a i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791682 1 + 43916225 --a i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230034 1 + 75399963 --a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783583 1 - 7209941 --a i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527378 1 + 3907144 --a i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340223 3 + 6628207 aCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321231 3 - 5917169 aCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281814 3 - 10531588 aCA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80465830 3 + 88915250 ACA i canFam3.chr5 I 1005 C 0 e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13706499 452 + 13852661 I a score=14228.000000 s hg38.chr16_GL383557v1_alt 49237 2 + 89672 AG s panTro5.chr16 21484365 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542986 2 - 90481686 AG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775266 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886353 2 + 163208435 aa i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791683 2 + 43916225 aG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230035 2 + 75399963 aG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783584 2 - 7209941 aG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527379 2 + 3907144 aG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340226 2 + 6628207 AG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321234 2 - 5917169 AG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281817 2 - 10531588 AG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13706951 2 + 13852661 AA i otoGar3.GL873566 I 452 C 0 s canFam3.chr5 80465833 2 + 88915250 AG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941465 459 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I a score=434750.000000 s hg38.chr16_GL383557v1_alt 49239 56 + 89672 TACCCATTGCTG---TTATTACCAGTTGACTTTCAGCAGCACCAACAAT-AAAACCTTTG s panTro5.chr16 21484367 56 - 81586097 TACCCATTGCTG---TTATTACCAGTTGACTTTCAGCCGCACCAACAAT-AAAACCTTTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21542988 56 - 90481686 TACCCATTGCTG---TTATTACCAGTTGACTTTCAGCCGCACCAACAAT-AAAACCTATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775268 56 + 3010529 TACCCATTGCTG---TTATTACCAGCTGACTTTCAGCAGCAACAACAAT-AAAACCTTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886355 59 + 163208435 TACCCATTGCTGTTATTATTACCAGTTGACTTTCAGCAGCACCAGCAAT-AAAACCTTTG i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791685 59 + 43916225 TACCTACTGCTGTCATTATTACCAGTTGACTTTCAGCAGCACCAATAAT-AAAACATTTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230037 59 + 75399963 TACCTACTGCTGTCATTATTACCAGTTGACTTTCAGCAGCACCAATAAT-AAAACATTTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783586 59 - 7209941 TACCTACTGCTGTCATTATTACCAGTTGACTTTCAGCAGCACCAATAAT-AAAACATTTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527381 59 + 3907144 TACCCACTGCTGTCATTATTACCAGTTGACTTTCAGCAGCACCAATAAT-AAAACCTTTG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340228 60 + 6628207 CACCCTCTGCTGTTATTATTACCAGTTGACTTTCAGCAGCACCAACAATAAAAATCTTTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321236 60 - 5917169 CACCCACTGCTGTTATTATTACCAGTTGACTTTCAGCAGCACCAACAATAAAAACCTTTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281819 60 - 10531588 CACCCACTGCTGTTATTATTACCAGTTGACTTTCAGCAGCACCAACAATAAAAACCTTTG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2941924 56 + 9850184 TACTCATTCCTG---TTATTACCTGTTGAGCTTCAGCGGCAGCAACAAT-AAAACCTTTG i proCoq1.NW_012152729v1 I 459 I 4 s otoGar3.GL873566 13706953 59 + 13852661 CACCCATTGCTGTTATTATTACCTGTTGACCTTCAGCAGCAGCAACAAT-AAAACCTTTG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80465835 59 + 88915250 TACCTGCTGCCGTTATTATTACGTGTTGACCTTCAGCAGCAGCAACAGA-AAAACCTTTG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I a score=9644.000000 s hg38.chr16_GL383557v1_alt 49295 2 + 89672 AT s panTro5.chr16 21484423 2 - 81586097 AT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543044 2 - 90481686 AT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775324 2 + 3010529 AT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886414 2 + 163208435 AT i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791744 2 + 43916225 AT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230096 2 + 75399963 AT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783645 2 - 7209941 AT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527440 2 + 3907144 AT i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340288 2 + 6628207 AC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321296 2 - 5917169 AC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281879 2 - 10531588 AC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13707012 2 + 13852661 GT i otoGar3.GL873566 C 0 I 2 s canFam3.chr5 80465894 2 + 88915250 GT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I a score=12198.000000 s hg38.chr16_GL383557v1_alt 49297 2 + 89672 AG s panTro5.chr16 21484425 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543046 2 - 90481686 AG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775326 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886416 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791746 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230098 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783647 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527442 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340290 2 + 6628207 AG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321298 2 - 5917169 AG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281881 2 - 10531588 AG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80465896 2 + 88915250 AC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=697519.000000 s hg38.chr16_GL383557v1_alt 49299 130 + 89672 -AAACTCTTggctgggcacagtggctcaagcctataatcctagcattttgggaggccgaggcaggaggatcacttgagcccagactgggcaatgtggcaaaaccccatctctat-aaaaaatacaaaaacta s panTro5.chr16 21484427 130 - 81586097 -AAACTCTTggctgggcacagtggctcaagcctataatcctagcattttgggaggccgaggcaggaggatcacttgagcccagactgggcaatgtggcaaaaccccatctctat-aaaaaatacaaaaacta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543048 130 - 90481686 -AAACTCTTggctgggcacagtggctcaagcctataatcctagcattttgggaggccgaggcaggaggatcacttgagcccagactgggcaatgtggcaaaaccccatctctat-aaaaaatacaaaaacta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775328 131 + 3010529 AAAACTCTTggctgggcacagtggctcaagcctataatcctagcattttgggaggccgaggcaggaggatcacttgagcccagactgggcaatgtggcaaaactccatctctat-aaaaaatacaaaaacta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886418 130 + 163208435 -AAACTCTTggctaggcaaagtggctcaagcctataatcctagcattttgggaggccaaggcaggaggatcacttgagcctagaccaggcaatgtggcaaaactccatctctat-aaaaaatacaaaaatta i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791748 131 + 43916225 -AAACTCTTggctgggcaccatggctcaagcctataatcctagcattttgggaggctgaggcaggaggatcacttgagctaagactgggcaatatggcaaaactccatctctacaaaaaaatacaaaaatta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230100 131 + 75399963 -AAACTCTTggctgggcaccgtggctcaagcctataatcctagcattttgggaggccaaggcagaaggatcacttgagccacgactgggcaatgtggcaaaactccatctctacaaaaaaatacaaaaatta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783649 131 - 7209941 -AAACTCTTggctgggcgccatggctcaagcctataatcctagcattttgggaggctgaggcaggaggatcacttgagccaagactgggcaatgtggcaaaactccatctctacaaaaaaatacaaaaatta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527444 131 + 3907144 -AGACTCTTggctgggcaccgtggctcaagcctataatcctagcattttgggaggccaaggcaggaggatcacttaagccaagactgggcaatgtggcaaaactccatctctacaaaaaaatacaaaaatta i colAng1.NW_012123265v1 C 0 I 12 s saiBol1.JH378225 6340292 130 + 6628207 -AAACTCTTggctggacacagtggctcgatcctataatctcagcactctgggaggctgaggcaggaggatcacttgagctgagcctgggcaatatggtgaaactccatctctac-acaaaataaaaaaatta i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321300 130 - 5917169 -AAACTCTTggctggacacagtggctcgatcctataatcccggcactttgggaggctgaggcaggaggatcacttgagcccagcctgggcaatatgatgaaactccatctctac-acaaaataaaaaaatta i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9281883 130 - 10531588 -AAACTCTTggctggacacagtggctcaagcctataatcccagcactttgggaggctgaggcaggaggatcacttgagcccagtctgggcaatatggtgaaactccatctctat-acaaaataaaaaaatta i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=52665.000000 s hg38.chr16_GL383557v1_alt 49429 16 + 89672 actgggtgtggtggtg s panTro5.chr16 21484557 16 - 81586097 actgggtgtggtggtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543178 16 - 90481686 actgggtgtggtggtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775459 16 + 3010529 actgggtgtggtggtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886548 16 + 163208435 attgggtgtggtagtg i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791879 13 + 43916225 actgggcgtggtg--- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230231 13 + 75399963 actgggcgtggtg--- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783780 13 - 7209941 actgggtgtggtg--- i manLeu1.NW_012101698v1 C 0 C 0 s saiBol1.JH378225 6340422 16 + 6628207 actggttgtggtggtg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321430 16 - 5917169 actggttgtggtaatg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282013 16 - 10531588 actggttgtggtagtg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 527575 12 + 3907144 I e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=366143.000000 s hg38.chr16_GL383557v1_alt 49445 68 + 89672 ggcacctgtagtcctagctactaggtagcctaaggtgggaggatcacttgag--cccaggagttcaaggc s panTro5.chr16 21484573 68 - 81586097 ggcacctgtagtcctagctactagggagcctaaggtgagaggatcacttgag--cccaggagttcaaggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543194 68 - 90481686 ggcacctgtagtcctagctactagggagcctaaggtgggaggatcacttgag--cccaggagttcaaggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775475 68 + 3010529 ggcacctgtagtcctagctactagggagcctaaggtgggaggatcacttgag--cccaggagttcaaggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886564 68 + 163208435 ggcacctgtagtcctagctactagggagcctaaggtgggaggatcacttgag--cccaggagtccaaggc i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791892 68 + 43916225 ggcacctgtagtcccagctactagggagcctgaggtgggaggatcacttcag--cccaggagttcaaggc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230244 68 + 75399963 ggcacctgtagtcccagctactagggagcctgaggtgggaggatcacttcag--cccaggagttcaaggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783793 68 - 7209941 ggcacctgtagtcccagctactagggagcctgaggtgggaggatcacttcag--cccaggagttcaaggc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527587 68 + 3907144 agcacctgtagtcccagctactagggagcctgaggtaggtggatcacttcag--cccaggagttcaaggc i colAng1.NW_012123265v1 I 12 C 0 s saiBol1.JH378225 6340438 67 + 6628207 ggcacctgtagtcccagctactagggaggctgaggtgggaggatcacttgagcccccagg---tcaaggc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321446 65 - 5917169 ggcacctgtagtcccagctactagggaggctgaggtgggaggatcacttgag--cccagg---tcaaggc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282029 64 - 10531588 ggcacctatagtcccagctactagggaggctgaggtgggaggatcacttgag---ccagg---tcaaggc i aotNan1.NW_018500622v1 C 0 I 16 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=93086.000000 s hg38.chr16_GL383557v1_alt 49513 20 + 89672 tgtagtgggctgtgatcaga s panTro5.chr16 21484641 20 - 81586097 tgtagtgggctgtgatcaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543262 20 - 90481686 tgtagtgggctgtgatcaga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775543 20 + 3010529 tgtagtgggctgtgatcaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886632 20 + 163208435 tatagtgggctgtgatcaga i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791960 20 + 43916225 tgcagtgggctgtgatcaga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230312 20 + 75399963 tgtagtgggctgtgatcaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783861 20 - 7209941 tgcagtgggctgtgatcaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527655 20 + 3907144 tgcagtgggctatgatcaga i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340505 20 + 6628207 cgcagtgagctgtgatcagg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321511 20 - 5917169 tgcagtgagctgtgatcagg i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9282093 16 - 10531588 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=320381.000000 s hg38.chr16_GL383557v1_alt 49533 69 + 89672 ccactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaagaaggaaggaaggaaggaagga---- s panTro5.chr16 21484661 69 - 81586097 ccactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaagaaggaaggaaggaaggaagga---- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543282 69 - 90481686 ccactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaagaaggaaggaaggaaggaagga---- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775563 69 + 3010529 ccactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaagaaggaaggaaggaaggaaggg---- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886652 70 + 163208435 ccactgcactccagcctgggtgacacagtgagacccctgtctcaaaaagaaggaaggaaggaaggaagga---- i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20791980 64 + 43916225 tcactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaaa-----aggaaggaaggaagga---- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230332 64 + 75399963 tcactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaaa-----aggaaggaaggaagga---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783881 64 - 7209941 tcactgcactccagcctgggtgacacagtgaga-ccctgtctcaaaaaa-----aggaaggaaggaagga---- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527675 68 + 3907144 tcactgcactccagcctggttgacacagtgaga-ccctgtctcaaaaaaaaGT-aggaagcaaggaagga---- i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6340525 64 + 6628207 ccactgcaccccagcctgggtgacacagtgaga-ccctgtctcga---------aggaaggaaggaaggaagga i saiBol1.JH378225 C 0 I 4 s cebCap1.NW_016107433v1 3321531 60 - 5917169 ccactgcactccagcctgggtgacacagtaaga-ccctgtctcga---------aggaaggaaggaagga---- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282109 52 - 10531588 ccactgcactccagcctgggtgacacagtgaga-cactgtctTga---------cggaagga------------ i aotNan1.NW_018500622v1 I 16 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21530311 10 - 44557958 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=47482.000000 s hg38.chr16_GL383557v1_alt 49602 29 + 89672 agg--------------------------------gagggaaggagggagggagggaagag s panTro5.chr16 21484730 61 - 81586097 aggaaggaaggaagggagggagggagggagggagggagggaaggagggagggagggaagag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543351 37 - 90481686 agg------------------------aagggagggagggagggagggagggagggaagag i panPan2.chr16 C 0 I 1 s gorGor5.CYUI01000018v1 775632 25 + 3010529 agg------------------------------------gaaggagggagggagggaagag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886722 41 + 163208435 agg--------------------aaggaaggaaggaaggaaggaaggaagggagggaagag i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20792044 22 + 43916225 agg---------------------------------------gaaggaggggaagaaagag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230396 22 + 75399963 agg---------------------------------------gaaggaggggaagaaagag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783945 22 - 7209941 agg---------------------------------------gaaggaggggaagaaagag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527743 22 + 3907144 agg---------------------------------------gagggaggggaagaaagag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530321 23 - 44557958 --------------------------------agggagggagggagggagggagg------ i calJac3.chr20 I 10 C 0 s saiBol1.JH378225 6340593 10 + 6628207 ---------------------------------------------ggaagggagg------ i saiBol1.JH378225 I 4 C 0 s aotNan1.NW_018500622v1 9282161 29 - 10531588 --------------------------------agggagggagggagggagggaggaaagag i aotNan1.NW_018500622v1 C 0 I 73 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e cebCap1.NW_016107433v1 3321591 0 - 5917169 C e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707014 2 + 13852661 I a score=256361.000000 s hg38.chr16_GL383557v1_alt 49631 98 + 89672 agaggaaggga-----------ggcaggc-aggcagggagggagggagggaagagaag--agagagcaagaaaggagggagggaag--------------------------gaaggaaag---aa----ggaagggagggaaaa s panTro5.chr16 21484791 113 - 81586097 agaggaagggaagagagaggaagggaggc-aggcaggcagggagggagggaagagaag--agagaggaagaaaggagggagggaag--------------------------gaaggaaag---aaagaaggaagggagggaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543389 114 - 90481686 agaggaagggaagagagaggaagggaggctaggcaggcagggagggagggaagagaag--agagaggaagaaaggagggagggaag--------------------------gaaggaaag---aaagaaggaagggagggaaaa i panPan2.chr16 I 1 C 0 s gorGor5.CYUI01000018v1 775657 97 + 3010529 agaggaaggga-----------gacaggc-aggcagggagggagggagggaagagaag--agacaggaagaaaggaggga-ggaag--------------------------gaaggaaag---aa----agaagggagggaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886763 102 + 163208435 tgaggaaggga-----------ggcaggc-agggagggagggagggaagagaagaaag--agagaggaagaaaggatggagggaag--------------------------gaaggaaag---aaagaaggaagggagggaaaa i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20792066 101 + 43916225 agaggaaggaa-----------ggcaggc-agggagggagagagggagggaagagaagaaagagaggaaggaaggaagggagggag--------------------------ggagggagg---aa---agggagggaggaagaa i cerAty1.NW_011999143v1 C 0 I 21 s chlSab2.chr5 58230418 92 + 75399963 agaggaaggaa-----------ggcaggc-agggagggagagagggagggaagagaagaaagagaggaaggaaggagggagggaaa--------------------------agaggaagg---ag---aggaagg--------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6783967 101 - 7209941 agaggaaggca-----------ggcaggc-agggagggagagagggagggaagagaagaaagagaggaaggaaggaagggagggag--------------------------ggagggagg---aa---agggagggaggaagaa i manLeu1.NW_012101698v1 C 0 I 12 s colAng1.NW_012123265v1 527765 127 + 3907144 agaggaaggaa-----------ggcaggc-aggaagggagagagggagggaagagaagaaagagagagaggaaggaaggatggaaggaaggaaggagggagggagggagggaggagggagg---aa---atggagggaggaagaa i colAng1.NW_012123265v1 C 0 I 30 s calJac3.chr20 21530344 68 - 44557958 -----gaggga-----------gggagga-aag-----agagagggaagagcca----------------gaggga--gaggaaag--------------------------gaaggaagg---g--------agggagggaggg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6340603 87 + 6628207 -----gaggga-----------gggagga-aag-----agagagggaagaatcagagg--taaaggaaaggaaggaaggaagaaag--------------------------gaaggggggaaag--------ggggagggaggg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321591 78 - 5917169 ----------------------aggagga-aag-----agagcgggaagagccagatg--gggaggaaaggaaggaaggaaggaag--------------------------tgggggagg---g--------agggagggaggg i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e aotNan1.NW_018500622v1 9282190 73 - 10531588 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707014 2 + 13852661 I a score=18619.000000 s hg38.chr16_GL383557v1_alt 49729 13 + 89672 -gaagaaag------aggaa s panTro5.chr16 21484904 13 - 81586097 -gaagaaag------aggaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543503 13 - 90481686 -gaagaaag------aggaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775754 13 + 3010529 -gaagaaag------aggaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886865 19 + 163208435 -gaaggaaggaaagaaggaa i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58230510 7 + 75399963 -------aa------aggaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784080 13 - 7209941 -gggaaaag------aggaa i manLeu1.NW_012101698v1 I 12 C 0 s colAng1.NW_012123265v1 527922 13 + 3907144 -ggaaaaga------aggaa i colAng1.NW_012123265v1 I 30 C 0 s calJac3.chr20 21530412 13 - 44557958 agggaggaa------agaa- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6340690 13 + 6628207 aggaaggaa------agga- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321669 13 - 5917169 agggaagaa------agaa- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282263 13 - 10531588 agggaggaa------agaa- i aotNan1.NW_018500622v1 I 73 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e cerAty1.NW_011999143v1 20792167 21 + 43916225 I e otoGar3.GL873566 13707014 2 + 13852661 I a score=38149.000000 s hg38.chr16_GL383557v1_alt 49742 7 + 89672 ggaagga s panTro5.chr16 21484917 7 - 81586097 ggaagga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543516 7 - 90481686 ggaagga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775767 7 + 3010529 ggaagga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886884 7 + 163208435 ggaagga i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20792188 7 + 43916225 ggaagga i cerAty1.NW_011999143v1 I 21 C 0 s chlSab2.chr5 58230517 7 + 75399963 ggaagga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784093 7 - 7209941 agaagga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527935 7 + 3907144 ggaagga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530425 7 - 44557958 ggaaggA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6340703 6 + 6628207 ggaagg- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321682 6 - 5917169 ggaagg- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282276 7 - 10531588 ggaaggg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e mm10.chr8 22470077 1164 - 129401213 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707014 2 + 13852661 I a score=12087.000000 s hg38.chr16_GL383557v1_alt 49749 2 + 89672 ag s panTro5.chr16 21484924 2 - 81586097 ag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543523 2 - 90481686 ag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775774 2 + 3010529 ag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886891 2 + 163208435 ag i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20792195 2 + 43916225 ag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230524 2 + 75399963 ag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784100 2 - 7209941 ag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527942 2 + 3907144 ag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530432 2 - 44557958 AA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6340709 2 + 6628207 aa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321688 2 - 5917169 aa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282283 2 - 10531588 aa i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22471241 2 - 129401213 AG i mm10.chr8 I 1164 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e dasNov3.JH569970 925259 509 + 1009443 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707014 2 + 13852661 I a score=14771.000000 s hg38.chr16_GL383557v1_alt 49751 3 + 89672 gaa s panTro5.chr16 21484926 3 - 81586097 gaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543525 3 - 90481686 gaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775776 3 + 3010529 gaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886893 3 + 163208435 gaa i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20792197 3 + 43916225 gaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230526 3 + 75399963 aaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784102 3 - 7209941 aaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527944 3 + 3907144 gaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530434 3 - 44557958 AAA i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6340711 3 + 6628207 aaa i saiBol1.JH378225 C 0 I 2 s cebCap1.NW_016107433v1 3321690 3 - 5917169 aca i cebCap1.NW_016107433v1 C 0 I 2 s aotNan1.NW_018500622v1 9282285 3 - 10531588 aaa i aotNan1.NW_018500622v1 C 0 I 2 s mm10.chr8 22471243 3 - 129401213 GGG i mm10.chr8 C 0 I 1 s dasNov3.JH569970 925768 3 + 1009443 GAG i dasNov3.JH569970 I 509 C 0 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21359685 828 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707014 2 + 13852661 I a score=6947.000000 s hg38.chr16_GL383557v1_alt 49754 11 + 89672 -gaaaAAA--AAAA s panTro5.chr16 21484929 11 - 81586097 -gaaaAAA--AAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543528 10 - 90481686 -gaaaAAA--AAA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775779 11 + 3010529 -gaaaAAA--AAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886896 11 + 163208435 -gaaaAAA--AAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21360513 11 - 74971481 -GAAAAAA--AAAA i rheMac8.chr20 I 828 C 0 s cerAty1.NW_011999143v1 20792200 11 + 43916225 -gaaaAAA--AAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58230529 1 + 75399963 -------------A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784105 9 - 7209941 ---aaaca--aaca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 527947 11 + 3907144 -gaaaAAA--AAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530439 11 - 44557958 -GACAGAG--AAAG i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6340716 11 + 6628207 -gagagag--ggaG i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3321695 9 - 5917169 -gagagag----ag i cebCap1.NW_016107433v1 I 2 C 0 s aotNan1.NW_018500622v1 9282290 13 - 10531588 -gatagagagagag i aotNan1.NW_018500622v1 I 2 C 0 s mm10.chr8 22471247 10 - 129401213 -AAGAAAT--AAA- i mm10.chr8 I 1 I 12 s dasNov3.JH569970 925771 11 + 1009443 CAAAAAAA--AAA- i dasNov3.JH569970 C 0 I 8 e canFam3.chr5 80465898 0 + 88915250 C e micMur3.chr20 54932336 523 + 72247402 I e proCoq1.NW_012152729v1 2941980 4 + 9850184 I e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707014 2 + 13852661 I a score=-27421.000000 s hg38.chr16_GL383557v1_alt 49765 2 + 89672 -A--G s panTro5.chr16 21484940 1 - 81586097 -A--- i panTro5.chr16 C 0 C 0 s nomLeu3.chr2 53886907 4 + 163208435 -AAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21360524 3 - 74971481 -ACA- i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20792211 3 + 43916225 -ACA- i cerAty1.NW_011999143v1 C 0 I 2 s chlSab2.chr5 58230530 3 + 75399963 -ACA- i chlSab2.chr5 C 0 I 2 s manLeu1.NW_012101698v1 6784114 3 - 7209941 -aca- i manLeu1.NW_012101698v1 C 0 I 2 s colAng1.NW_012123265v1 527958 3 + 3907144 -ACA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530450 1 - 44557958 -A--- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6340727 1 + 6628207 -A--- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321704 1 - 5917169 -a--- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282303 1 - 10531588 -a--- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932859 1 + 72247402 -A--- i micMur3.chr20 I 523 C 0 s proCoq1.NW_012152729v1 2941984 1 + 9850184 -A--- i proCoq1.NW_012152729v1 I 4 C 0 s otoGar3.GL873566 13707016 1 + 13852661 -A--- i otoGar3.GL873566 I 2 C 0 s mm10.chr8 22471269 1 - 129401213 -A--- i mm10.chr8 I 12 C 0 s dasNov3.JH569970 925790 2 + 1009443 AG--- i dasNov3.JH569970 I 8 C 0 e canFam3.chr5 80465898 0 + 88915250 C e panPan2.chr16 21543538 0 - 90481686 C e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e macFas5.chr20 21071987 0 - 78541002 C e gorGor5.CYUI01000018v1 775790 0 + 3010529 C a score=546.000000 s hg38.chr16_GL383557v1_alt 49767 1 + 89672 A s nomLeu3.chr2 53886911 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s canFam3.chr5 80465898 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 925792 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54932860 0 + 72247402 C e mm10.chr8 22471270 0 - 129401213 C e proCoq1.NW_012152729v1 2941985 0 + 9850184 C e aotNan1.NW_018500622v1 9282304 0 - 10531588 C e cebCap1.NW_016107433v1 3321705 0 - 5917169 C e panPan2.chr16 21543538 0 - 90481686 C e macNem1.NW_012011355v1 14469700 1502 + 26466322 T e rheMac8.chr20 21360527 0 - 74971481 C e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 527961 0 + 3907144 C e manLeu1.NW_012101698v1 6784117 2 - 7209941 I e chlSab2.chr5 58230533 2 + 75399963 I e cerAty1.NW_011999143v1 20792214 2 + 43916225 I e saiBol1.JH378225 6340728 0 + 6628207 C e calJac3.chr20 21530451 0 - 44557958 C e otoGar3.GL873566 13707017 0 + 13852661 C e gorGor5.CYUI01000018v1 775790 0 + 3010529 C e panTro5.chr16 21484941 0 - 81586097 C a score=12041965.000000 s hg38.chr16_GL383557v1_alt 49768 775 + 89672 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGAGTATGCCA-TAACACCATTTGATGCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGATCTTGTATAAAGCTACACTTTGGCTGAAAGACAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAACGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAGGAAGAAGCCAAAGGGAGAAATAAGCTTATAAAATAACTGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTAAGAAGGC--AGCAGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---ACGAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-CTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAAGCAGCAGCTGGTGACAGTTTTGTAGCACTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT s panTro5.chr16 21484941 775 - 81586097 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGAGTATGCCA-TAACACCATTTGATGCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGATCTTGTATAAAGCTACACTTTGGCTGAAAGACAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAATGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAGGAAGAAGCCAAAGGGAGAAATAAGCTTATAAAATAACTGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTAAGAAGGC--AGCAGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---ACGAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATTTGCTAACCACATTCCTAATAAGCAGCAGCTGGTGACAGTTTTTTAGCACTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21543538 775 - 90481686 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGAGTATGCCA-TAACACCATTTGATGCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGATCTTGTATAAAGCTACACTTTGGCTGAAAGACAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAATGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAGGAAGAAGCCAAAGGGAGAAATAAGCTTATAAAATAACTGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTAAGAAGGC--AGCAGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---ACGAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATTTGCTAACCACATTCCTAATAAGCAGCAGCTGGTGACAGTTTTTTAGCACTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 775790 773 + 3010529 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGAGTATGCCA-TAACACCATTTGATGCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAAC--ATCTTGTATAAAGCTACACTTTGGCTGAAAGACAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAACGTTTGAGTATTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAACTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAT-AAAAGCAGGAGCCACTCAATTAC-TACTAAGGAAGAAGCCAAAGGGAGAAATAAGCTTATAAAATAACTGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTTAGAAGAC--AGCAGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---ACAAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAAGCAGCAGCTGGTGACAGTTTTGTAGCACTGCGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53886912 776 + 163208435 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGAGTATGCCA-TAACACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGCGATAAACAGATCTTGTATAAAGCTACACTTTGGCTGAAATACAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTACCACAAAGGTGGCCTGATGCCAGAAGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAGGAAGAAGCCAAAGGGAGAAATAAGCTTATAAAATAACTGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTTAGAAGAC--AGCGGTATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATACCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---ACGAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACATTTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCTGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAAGAAGCAGCTGGTGACAGTTTTGTAGCACTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAATTTAGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21360527 771 - 74971481 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGACTATGCCA-TAACACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCAGTGACAAACAGACCTTGTATAAAGCTACACTTCGGCTGAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTATGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAAACGCCAAAGGGAGAAATAAGCTCATAAAATAACCGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTTAGAAGAC--AGCGGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---GCGAA----AGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCTCACCAAGATAAATCACTAACCATCTGAAACCCACAAAAATGGA-TTAAGGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCACTGTGACATT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i rheMac8.chr20 C 0 C 0 s macNem1.NW_012011355v1 14468198 771 + 26466322 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGACTATGCCA-TAACACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCAGTGACAAACAGACCTTGTATAAAGCTACACTTCGGCTGAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTATGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAGACGCCAAAGGGAGAAATAAGCTCATAAAATAACCGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTTAGAAGAC--AGCGGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---GCGAA----AGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCACTGTGACATT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i macNem1.NW_012011355v1 T 1502 C 0 s cerAty1.NW_011999143v1 20792216 771 + 43916225 AACTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGACTATGCCA-TAACACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGACCTTGTATAAAGCTACACTTCGGCTGAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTATGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAGACGCCAAAGGGAGAAATAAGCTCATAAAATAACCGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTTAGAAGAC--AGCGGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---GCAAA----AGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCACACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCACTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i cerAty1.NW_011999143v1 I 2 I 1624 s chlSab2.chr5 58230535 763 + 75399963 AACTCTCCAGGT--GCTGGTCTATACTTT---TAGGAATGAGTATGCCA-TAACACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGATCTTGTATAAAGCTACACTTCGGCTGAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTATGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGACAACGCCAAAGGGAGAAATAAGCTCATAAAATAACCGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTT-----------CGGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATACCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---GCGAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCACTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i chlSab2.chr5 I 2 C 0 s manLeu1.NW_012101698v1 6784119 771 - 7209941 aaCTCTCCAGCT--GCTAGTCTATACTTTATCTAGGAATGACTATGCCA-TAACACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGACCTTGTATAAAGCTACACTTCGGCTGAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTATGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAGATGCCAAAGGGAGAAATAAGCTCATAAAATAACCGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCCCACTTAGAAGAC--AGCGGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---GCGAA----AGAAAGCTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCACTGTGACTTT--TTAAACGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i manLeu1.NW_012101698v1 I 2 C 0 s colAng1.NW_012123265v1 527961 775 + 3907144 -ACTCTCCAGCC--GCTAGTCTATACTTTATCTAGGAATAAGTATGCCA-TAACACCATTTGATTCCGTGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGATCTTGTATAAAACTACACTTCGGCTAAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAAGTATGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAGACGCCAAAGGGAGAAATAAGCTCATAAAATAACCGATCCAACATCCAGCTTTGAAAAATTATCTATGCATAACTCTTCCTCACTTAGAAGACCGAGCGGGATCAGTTATCCTTTTCAAT--GAATAGT-ACTGCTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCACTCCA-GCACAAACATGTC---GTGAAAGAGAGAAAGGTGCATACATCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTCATCCCACCAAGATAAATCACTAACCATCTGAAACCCGCAAAAATGGA-TTAACGATCTCATACAGCATGACTATGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCGCTGTGAC-TC--TTAAAGGAAAATATTAGCAAGGACACACTAAATAGAAGTTTAGTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21530451 767 - 44557958 AACTCTCCAGCT--GCAAGTCTATACTT----TAGGAATGAGTCTGCCA-TAATACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCAGTGACAAACAGATCTTGTATAAAGCTACATTTTGGCTGAAAGAGAGTATAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTTATAAGGAAGGAGGGCCTCAGGC-AGAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGAGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGGCACTCAATTAC-TACTAAAGAAA---CCAAAGAGAGAAATAAGCTCATAAAATAACCGATCCAATATCCAGCTTTGAAAAATCATCCAGGCATAACTCTTCCCCACTTAGAAGAC--AGTGTGATCAGTTATCCCTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCTCTCCA-GCACAGACATGTA---GCAAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTGATCCCACCAAGATAAATTACTAACCATCTGAAACTCGCAAAAATGGG-TTAATGATCTCATACAGCATGACTATGAAAACCTACATCTGCTAACCACATTCCTAACAGGAAGCAGCTGGTGACAA-TTTGTAGCGCTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACATTAAACAGAAGTTTAGTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6340728 769 + 6628207 AAGTCTTCAGCT--GCGAGTCTGTACTTTATCTAGGAATGAGTCTGCCA-TAATACTATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCAGTGACAAACAGATCTTGTATAAAGCTACATTTTGGCTGAAAGGGAGTATGGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTTATAAGGAAGGAGGGCCTCAGGC-AGAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAAGAGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAA---CC--AGAGAGACATAAGCTCCTAAAATAACCGATCCAACATGCAGCTTTGAAAAATTATCCAGACATAACTCTTCCCCACTTAGAAGAC--AGCGTGATCAGTTATCCCTTTCAATGAGAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TTTTCTCTCCA-GCACAGACATGTT---GC--AAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTGATCCCACCAAGATAAATCACTAACCATCTGAAACTCGCAAAAATGGG-TTAATGATCTCATACAGCATGACTATGAAAACCTACATCTGCTAACCACATTCCTAACAGGAAGCAGCTGGTGACAG-TTTGTAGCGCTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAACAGAAGTTTAGTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3321705 769 - 5917169 aaCTCTCCAGCT--GCGAGTCTATACTTTATCTAGGAATGAGTCTGCCA-TAATACCATTTGATTCCATGCTTAAAGGGCAAATGGCCAAATTAATTTCAGTGACAAACAGATCTTGTATAAAGCTACATTTTGGCTGAAAGGGAGTATAGATTGCCAAGAGTCCATCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTTATAAGGAAGGAGGGCCTCAGGC-AGAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGAGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAA---CCAAGGAGAGAAATAAGCTCATAAAATAACCGATCCAACATGCAGCTTTGAAAAATTATCCAGGCATAACTCTTCCC--CTTAGAAGAC--GGTGTGATCAGTTATCCCTTTCAAT--GAATAGT-ACTACTTTACCTTCCAGTAGAAATATCCTGCAATATA-TCTTCTCTCCA-GCACAGACATGCC---GCAAAAGAGAGAAAGGTGCATATGTCCTTTAGCTGATGCAGGCACA-TTTTT-----AATTGATCCCACCAAGATAAATCACTAACCATCTGAAACTCGCAAAAATGGG-TTAATGATCTCATACAGCATAACTATGAAAACCTACATCTGCTAACCACATTCCTAACAGGAAGCAGCTGGTGACAG-TTTGTAGCGCAGTGACTTT--TTAAAGGAAAATATTAGCAAGGACATACTAAACAGAAGTTTAGTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9282304 751 - 10531588 AACTCTCCAGCT--GTGAGTCTATACTTTATTTAGGAATGAGTCTGCCA-TAATACCATTTGATTCCATGCTTAAAGGGCAAATAGCCAAATTAATTTCAGTGACAAACAGATCTTGTATAAAGCTACATTTTGGCTGAAAGGGAGTACAGATTGCCAAGAGTCCGTCAAAGGAAAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTTATAAGGAAGGAGGGCCTCAGGC-AGAATTGCAGC-CCTTAGCAAGCCTGAAGGCCACTGCCACAAAGGAGGCCTGATGCCAGAGGAAC-AAAAGCAGGAGCCACTCAATTAC-TACTAAAGAAA---CCAAAGAGAGAAATAAGCTCATAAAATAACCGATACAACATCCAGCTTTGAAAAATTATCCAGGCATAACTCTTCCCCACTTAGAAGAC--AGCGT----------------------GAATAGT-ACTACTTTACCTTCCAGTAGAAACATCCTGCAATATA-TTTTCTCTCCA-GCACAGACATGTC---GCAAAAGAGAGAAAGGCGCATATGTCCTTTAGCTGATGCAAGCACA-TTTTT-----AATTGATCCCACCAAGATAAATCACTAACCATCTGAAACTGGCAAAAATGGG-TTAATGATTTCATACAGCATGACTATGAAAACCTACATCTGCTAACCACATTCCTAACAGGAAGCAGCTGGTGACAG-TTTGTAGCGCTGTGACTTT--TTAAAGGAAAATATTAGCAAGGACACACTAAACAGAAGTTTAGTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54932860 768 + 72247402 AACTCTCTAGCT--GAGAATCTATACTTTATCTAGGAATGAGTCTGCTA-TAATACCACTTGTTTCCAGGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAACAGATCTTGTATAAAGCTGCACTTCAGCTGAAAGGGAGTATATATTGCCAAGAGTCCATCAAAGG-AAAGAA--TTAGTGGGTCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAGGC-AAAACTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGCAGCCTGATGCCAAGGAAAC-AAAAGT-GGAGCCACTCAATTAC-TATTTAA-AAGAGGCCAAAGGGAGAAATAAGCTTGTAAGATAACCAATCCGACTTTCACCTTTGAAAATGGATCCATGCATAACTCTCCTCTAGTTAGAAGAC--AGTGAGATCAGTTATCCCTTTCAAT--GGATAGTAACGACTTTGCCTTCCAGGAGAAATAACCTAT-----A-TTTCCTCCCCA-GGACAAACATGCA---GTTTAAGAGGGAAAGGTGCACATGTCCTTTAGCTGATGCAAGCATA-TTTTT----AAATTCATCCCACTAAGATAAATCACTATCCATCTGAAACCCGCAAAAATGGA-TTAACCATCTCATGCCGTACGACTGTGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCGCTGCGACTTT--TT-AAGGAAAATATTAGCAAGGACATACTAAGCAGAAGTTTAGTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2941985 770 + 9850184 AACTCTCTAGCT--GAGAATCTATACTTTATCTAGGAATGAGTCTGCTA-TAATACCACTTGTTTCCAGGCTTAAAGGGCAAATGGCCAAATTAATTTCGGTGACAAGCAGATCTTGTACAAAGCTGCACTTCAGCTGAAAGGGAGTATATATTGCCAAGAGTCCATCAAAGG-AAAAAATTTTAGTGGGTCTGGGGTTGGTTCCAAGGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAGGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGCAGCCTGATGCCAAGGAAAC-AAAAGCGGGAGCCACTCAATTAC-TACTTAA-AAGAGGCCAAAGGGAGAAATAAGCTTGTAAGATAACCAATCTGACATCCAGCTTTGAAAATGTATCCATGCATAACTCTTCCCCAGTTAGAAGAC--AGTGAGATCAGTTATCCCTTTCAAT--GGATAGT-ACGACTTTGCCTTCCAGGAGAAATAACCTGC-----A-TTTTCTCCCCA-GCACAAACATGCA---GTTTAAGAGGGAAAGGTGCACGTGTCCTTTAGCTGATGCAAGCATA-TTTTT----AAATTCAGCCCGCTAAGATAAATCACTATCTATCTGAAACCCGCAAAAATGGA-TTAACTATCTCATGCCGTATGACTGTGAAAACCCACATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCGCTGTGACTTT--TT-GAGGAAAATATTAGCAAGAACATACTAAGCAGAAGTTTAGTTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13707017 752 + 13852661 AACTCTCCAGCT--GAGAATCTATACTTTATCTAGGAATAAGTCTGTTA-TTATGCCACTTGTTTCCAGGCTTCAAGGGCAAATGGCCAAATTAATTTCAGTGACAAAAAGAACTTGTATAAAGCTGCACTTCAGCTGAAAGGGAGTATATATTGCCAAGAGTCCGTCAAAGG-AAAGAA--TTAGTGGGTCTGGGGCTGATTCCAAGGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCTCAAGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCATTGCCACAAAGGCGGCCTCATGCCAAGGAAAC-AAAAACAGGAGCCACTCAATTAC-CACTGAA-AAGAGGCCAAAGGGAGAAATAAGCTTGTAAGATAACCAGTCCTACATCCAACTTTGAAAAATTATCCATGCATAATTCTTCTCCAGTTAGAAGAC--AATGAAATCTGTTA--CCTTTCAAT--GGATAGT-ATGACTTTG-----------------CCTAC-----A-TTTTCTCTCCA-GCACAAACATGCAGATGTTTAAGAGGGAAAGGTGCAGATGTCCTTTAGCTGATGCAAGCACA-TTTTA----AAATTCATCCCGCTCAGAGAAATCACTACCCATCTGAAACCCACAAAAATGAA-TTAACTATCTCATGCCGTCTGATGATGAAAACCCCCATCTGCTAACCACATTCCTAATAGGAAGCAGCTGGTGACAGTTTTGTAGCCCTGTGACTTT--TT-AAGGAAAATACTAGCAAGAACATACGAAACAGAAGTTTAGTTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22471270 716 - 129401213 AACTCTCCAGCTAAGTAAGTCTCCACTTC-TTTAGGAATGAGTCTGCCA-CAACACTGTTTGATTATAGGCATAAAGGACAAATGGCTAAATTAATTTTGGTGACAAGCAAATCTGGTATAAAGCTACACTTTGGTTGGAAGGAAACACTCGCTGCCAAGAG-CCGTCAAAGA-AAAGAA--TTAGTGGATCTGGGGTTGCTTCCAAGGCTTGAGTGTTGTGTAACTTCATCAGGAAGGAGGGCCCCAGGC-TAAATCTCAGCTTTTTAGCAAGCCTGAAGGTCACTTC-----------CCTGATTCCACAGGAAC-AAAGGCAGG---CACAAAAGTAA-CCC------AGAGGCC-AAGGGAGAAATGAGCTTGTAAAATTACCAGCCTGACATCC-------------------TCTGTAATTCTCCCTC----AGAAGAC--AGCGAGGCCAGTTGTCCCTTTTA----TGGTTGT-TTTACTTTGCCATTTGCTAGAAATAGTTTACAATATA-TTTCTTCTCCA-ATGCAA----------ACTAA----GGAAAG------ATATGCTTAAGCTGATGTGGGCACA-TTTTTAAAAAAATTCCTCCCACCAAGATAAATCACTACCCATCTGAAACCCACAAAACCGGA-TTAACTATCTCCTGTATTAGGGCCACGGAACCCCACATCTGCTAACCACACTCCTAATGAGAAGCAGCTGGGGACAGTTTTGTCACTGTGTGACTTTCCTTATAGGAAAATATTAGCAAGGACACGCTAAGCAG---TTTAGTTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80465899 777 + 88915250 GATTCTCAAGCT--TAGAGTCTATGCTTTATCTAGGAATGAGTCTCTCATTAATACTGCTCCGTTCCAGGCTTAAAAGGCAAATGGCCAAATTAATTTCGGTGACGAACAGATCTTGTATAAAGCTACGTTTTGGCTGAAAGGGAGTACATATTGCCAAGAGTCCATCAAAGG-AAAGAA--TTAGTGGATCTGGGGTTCGTTCCAAGGTTTGAGTGTTGTGTAATTTCATAAGGAAGGAGGGCCCCGGGC-AAAATTGCAGC-CCTTAGCAAGCCTGAAGGTCACCACCACAAAGGCGGCCTGATGCCAGAGGAACAAAAAATGAGAGCTGCTCAATTAC-CACTAAAGAGA---CCAAAGGAAGAGTGAAGCTTGTAAGATAACCAATCCGACATCCAACTTTGAATATTTATCCATGCATGACTCTTCCCCAGATAGAAGAC--AGTGAGATCAATTGTCCCTTTCAAA--GGGCAGT-ACTCCTTTGCCTTCCAGGAGAAATATCCTAAACCGTATTTTTCTTTCCA-GCGCAAACATGAA---GTCCAAGAGGGAAAGGTGAATACATCCTTTAGCTGATGCAAGCACA-TTTTA----AAATTCATCCCGCCAAGATAAATCACTATTTATTTGAAACCCACAAAAATGGA-TTAACTATCTCATGCGTTACGACTATGAAAACCCACATCTGCTAACCACATTCTTAATGAGAAGCAGCTGGCGACAGTTTTGTAGCTCTGTGACTTTCTTTTTAGGAAAATATTAGCAAGGACATACTAAGCAGAAGGTTAGTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 925793 765 + 1009443 AACTCGCCAGTT--GAGAGTCTATATTTGATTTAGGAATGAGTCTGCCA-TAATGCCATGTGATTCCAGGCTTAAAAGGCAAATGGCCAAATTAATTTCAGTGACAAAAAGATCCTGTATAAAGCTACACTTTGGCTGAAAG-GAATGTATATTGCCAAGAGT-TGTCAAAGG-AAAGAA--TTAGTGGATCTGGGGCTGGTTCCAAGGTTTGAGTGTTGTGTAATTTCAT-AGGAAGGAGGGCTCCAGGCAAAAATCACAGC-TCTTAGCAAGCCTGAAGGTCACTGCCACAAAGGTGGCCTAATGCCAAAGGAAC-AAAAGCTAGAGCGGCTCAATTACTTAATTAAGAAAAGACCAAAGGGAGAAATAAGCTTGAAAGATAACCAATGCAATGTCCAACCTTGAAAAATTATCCACGCATAA--CTTCCCCGGTTAAAAGAC------TGATCAGTTATCCCTCTCCAT--ACATAGC-ATTACTTTGCCTTCTGGGAGAAATATCCTAAAACATA-TTTTCTCTCCACAAACAAACATGAA---GTAAAAGAGAAAGATACACATACATCATTTAGCTGATGCAAGCACA-TTTTA----AAATTTATCCCGCCAAGATAAACCACTATCCATCTGAAACCCACAAAAATGGATTTAACTATCTCATGCATTATGACTGTGAAAAACCACATCTGCTAACCACACTCCTAATGAGAAGCAGCTGGTGACAGTTTTGTAGCGCTGTGACTTT--TT--GTGAAAATATTAGCAAGTATACACTAAACAGG---TTAGTTT i dasNov3.JH569970 C 0 C 0 e macFas5.chr20 21071987 0 - 78541002 C a score=406813.000000 s hg38.chr16_GL383557v1_alt 50543 25 + 89672 CATTGAATCCACTTAGTTACGGAAA s panTro5.chr16 21485716 25 - 81586097 CATTGAATCCACTTAATTACGGAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544313 25 - 90481686 CATTGAATCCACTTAATTACGGAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776563 25 + 3010529 CATCGAATCCACTTAGTTACGGAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887688 25 + 163208435 CACTGAATCCACTTAGTTACGGAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361298 25 - 74971481 CATTGAATCCACTTAGTTACGGAAA i rheMac8.chr20 C 0 C 0 s macNem1.NW_012011355v1 14468969 25 + 26466322 CATTGAATCCACTTAGTTACGGAAA i macNem1.NW_012011355v1 C 0 I 733 s cerAty1.NW_011999143v1 20794611 25 + 43916225 CATTGAATCCACTTAGTTACGGAAA i cerAty1.NW_011999143v1 I 1624 C 0 s chlSab2.chr5 58231298 25 + 75399963 CATTGAATCCACTTAGTTACGGAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784890 25 - 7209941 CATTGAATCCACTTAGTTACGGAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528736 25 + 3907144 CATTGAATCCACTTAGTTATGGAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531218 25 - 44557958 CATTGAATCCACTTAGTTACAGAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341497 25 + 6628207 CATTGAATCCACTTAGTTACAGAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322474 25 - 5917169 CATTGAATCCACTTAGTTACAGAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283055 25 - 10531588 CACTGAATCCAATTAGTTACAGAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54933628 25 + 72247402 CATTGAATCCACTTAGTTATGGAAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2942755 25 + 9850184 CATTGAATCCACTTAGCTACGGAAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13707769 25 + 13852661 CACTGAATCCATTTAGTTATGGAAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22471986 19 - 129401213 ---TGTTT---TTTAGTTATGGAAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80466676 25 + 88915250 CACTGAATCCACTTAGTTATGGAAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 926558 25 + 1009443 TGTTGAATCCACTTAGGTATGGAAA i dasNov3.JH569970 C 0 C 0 e macFas5.chr20 21071987 0 - 78541002 C a score=744069.000000 s hg38.chr16_GL383557v1_alt 50568 76 + 89672 ATCACCAGTGTTTTCTTTTTTCT--TTTTTTT-A--TTGACAATCATGGAAATTACATAATTTGTCATGAAATTCAAATAA s panTro5.chr16 21485741 76 - 81586097 ATCACCAGTGTTTTCTTTTTTCT--TTTTTTT-A--TTGACAATCACGGAAATTACGTAATTTGTCATGAAATTCAAATAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544338 75 - 90481686 ATCACCAGTGTTTTCTTTTTTC---TTTTTTT-A--TTGACAATCACGGAAATGACGTAATTTGTCATGAAATTCAAATAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776588 72 + 3010529 ATCACCAGTGTTTTTTTTC------TTTTTTT-A--TTGACAATCATGGAAATTACGTAATTTGTCATGAAATTCAAATAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887713 75 + 163208435 ATCACCAGTGTTTTCTTTTTTC---TTTTTTT-A--TTGACAATCATGGAAATTATGTAATTTGTCATGAAATTCAAATAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361323 71 - 74971481 ---ATCAGTATTTTCTTTTTTC----TTTTTT-A--TCGATAATCATGGAAATTACATAATTTGTCATGAAATTCAAATAA i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794636 69 + 43916225 ---ATCAGTA-TTTCTTTTTTC----TTTTTT----TCGATAATCATGGAAATTACATAATTTGTCATGAAATTCAAATAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231323 71 + 75399963 ---ATCAGTATTTTCTTTTTTC----TTTTTT-A--TCGATAATCATGGAAATTACATAATTTGTCATGAAATTCAAATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784915 68 - 7209941 ---ATCAGTATTTTCTTTT-------TTTTTT-A--TCGATAATCATGGAAATTACATAATTTGTCATGAAATTCAAATAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528761 71 + 3907144 ---ATCAGTATTTTCTTTTTTC----TTTTTT-A--TCGATAATCATGGAAATTACATAATTTGTCATGAAATTCAAATAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531243 63 - 44557958 ATCAGCAAC--TT-------------TTTTTT-A--TTGACAATCATGGAAATTACATAATTTGTCATGAAATTCAAAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341522 65 + 6628207 ATCACCAGCAACT-------------TTTTTT-A--TTGACAATCCTGGAAATTACATAATTTGTCATGAAATTCAAATAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322499 65 - 5917169 ATCACCAGCAACT-------------TTTTTT-A--TTGACAATAATGGAAATTACATAATTTGTCATAAAATTCAAATAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283080 66 - 10531588 ATCACCAGCAACT-------------TTTTTTAA--TTGACAATTATGGAAATTACATAATTTGTCATGAAATTCAAATAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54933653 62 + 72247402 ATCACCAGTG----------------TTTTTT-A--TTGACAATCATGGAAATTACATAATTTGCCATGAAATTCAAATAA i micMur3.chr20 C 0 I 718 s proCoq1.NW_012152729v1 2942780 62 + 9850184 ATCACCAGTG----------------TTTTTT-A--TTGACGATCATGGAAATTACATAATTTGCCATGAAATTCAAATAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13707794 62 + 13852661 ATAACTAGTG----------------TTTTTC-A--TTGACAATCATGGAAATGACATAATTTGCCATGAAATTCAAATTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22472005 63 - 129401213 ATCACCAGTGC---------------TTTTTT-A--TTGACAATTATGGAAATTACATAATTTGCCATGAAATTCAAATAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80466701 62 + 88915250 ATCACCAGTG----------------TTTTTT-A--TTGACAGTCATGGAAATCACACAATTTGCTATGAAATTCAGATAA i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 926583 57 + 1009443 ----------------------ATCGTTGTTT-AATTTGACAGATGTGGAAATTTTATAA-TTGCCATGAAGTTAAAATTA i dasNov3.JH569970 C 0 C 0 e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C a score=52307.000000 s hg38.chr16_GL383557v1_alt 50644 6 + 89672 TATCTA s panTro5.chr16 21485817 6 - 81586097 TATCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544413 6 - 90481686 TATCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776660 6 + 3010529 TATCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887788 6 + 163208435 TATCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361394 6 - 74971481 TATCTA i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794705 6 + 43916225 TATCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231394 6 + 75399963 TATCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784983 6 - 7209941 TATCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528832 6 + 3907144 TATCTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531306 6 - 44557958 TATCTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341587 6 + 6628207 CAGCGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322564 6 - 5917169 TAGCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283146 6 - 10531588 TATCTA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2942842 6 + 9850184 GGTCTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13707856 6 + 13852661 AATCTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22472068 6 - 129401213 GATCTA i mm10.chr8 C 0 C 0 s canFam3.chr5 80466765 6 + 88915250 TCCCCA i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 926640 6 + 1009443 GATCCA i dasNov3.JH569970 C 0 I 170 e micMur3.chr20 54933715 718 + 72247402 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C a score=41293.000000 s hg38.chr16_GL383557v1_alt 50650 4 + 89672 AAAA s panTro5.chr16 21485823 4 - 81586097 AAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544419 4 - 90481686 AAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776666 4 + 3010529 AAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887794 4 + 163208435 AAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361400 4 - 74971481 AAAA i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794711 4 + 43916225 AAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231400 4 + 75399963 AAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784989 4 - 7209941 AAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528838 4 + 3907144 AAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531312 4 - 44557958 AAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341593 4 + 6628207 AAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322570 4 - 5917169 AAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283152 4 - 10531588 AAAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2942848 4 + 9850184 ACAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13707862 4 + 13852661 AAAA i otoGar3.GL873566 C 0 I 1816 s mm10.chr8 22472074 4 - 129401213 AAAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80466771 2 + 88915250 AA-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54933715 718 + 72247402 I e dasNov3.JH569970 926646 170 + 1009443 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C a score=49504.000000 s hg38.chr16_GL383557v1_alt 50654 4 + 89672 TAAA s panTro5.chr16 21485827 4 - 81586097 TAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544423 4 - 90481686 TAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776670 4 + 3010529 TAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887798 4 + 163208435 TAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361404 4 - 74971481 TAAA i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794715 4 + 43916225 TAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231404 4 + 75399963 TAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784993 4 - 7209941 TAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528842 4 + 3907144 TAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531316 4 - 44557958 TAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341597 4 + 6628207 TAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322574 4 - 5917169 TAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283156 4 - 10531588 TAAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2942852 4 + 9850184 TAAA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22472078 4 - 129401213 TAAA i mm10.chr8 C 0 I 3626 s canFam3.chr5 80466773 4 + 88915250 TAAA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54933715 718 + 72247402 I e dasNov3.JH569970 926646 170 + 1009443 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=30457.000000 s hg38.chr16_GL383557v1_alt 50658 4 + 89672 AGTC s panTro5.chr16 21485831 4 - 81586097 AGTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544427 4 - 90481686 AGTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776674 4 + 3010529 AGTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887802 1 + 163208435 A--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361408 4 - 74971481 AGTC i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794719 4 + 43916225 AGTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231408 4 + 75399963 AGTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6784997 4 - 7209941 AGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528846 4 + 3907144 AGTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531320 4 - 44557958 AGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341601 4 + 6628207 AGTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322578 4 - 5917169 AGTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283160 4 - 10531588 AGTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2942856 4 + 9850184 AGTC i proCoq1.NW_012152729v1 C 0 I 693 s canFam3.chr5 80466777 4 + 88915250 AATC i canFam3.chr5 C 0 I 1429 e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e dasNov3.JH569970 926646 170 + 1009443 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=353565.000000 s hg38.chr16_GL383557v1_alt 50662 52 + 89672 -Agcccagcacggtggctca-cgcctgtaatcctagcactttgggaggccgagg s panTro5.chr16 21485835 52 - 81586097 -Agcccagcacggtggctca-cgcctgtaatcctagcactttgggaggccgagg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544431 52 - 90481686 -Agcccagcacggtggctca-cgcctgtaatcctagcactttgggaggccgagg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776678 52 + 3010529 -Agcccagcacggtggctca-cgcctgtaatcctagcactttgggaggccaagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887803 52 + 163208435 -Agcccagcacagtggctca-catctgtaatcctagcactttgggaggccgagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361412 51 - 74971481 -Agcccagcacagtggctca-cgtctgtaatcctagtacttt-ggaggccgaga i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794723 52 + 43916225 -Agcccagcacagtggctcgtcctgtgtaatcctagtacttt-ggaggccgaga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231412 51 + 75399963 -Agcccagcacagtggctga-cgtctgtaatcctagtacttt-ggaggccgaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6785001 51 - 7209941 -Agcccagcacagtggctca-cgtctgtaatcctagtacttt-ggaggccgaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528850 51 + 3907144 -AGCCCAGCAGAgtggctca-tgtctgtaatcctagtacttt-ggaggccgaga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531324 52 - 44557958 -ggcccagcatggtggctca-cacctgtaatcccagcactttgggaggccaagg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6341605 52 + 6628207 -ggcccagcacggtggctca-cacctgtaatcccaacactttgggaggctgaag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322582 53 - 5917169 Gggccgggcgcggtggctca-agcctgtaatcccagcactttgggaggccgagg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9283164 52 - 10531588 -Agcccagcatggtggctca-cacctgtaatcccagcactttgggaggccgagg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=411813.000000 s hg38.chr16_GL383557v1_alt 50714 70 + 89672 tgggtggatcatttgaggtcaggggttcgagaccagcct-ggtcaacgtggtgaaaccctgtctccactaa s panTro5.chr16 21485887 70 - 81586097 tgggtggatcatttgaggtcaggggttcgagaccagcct-ggtcaacgtggtgaaaccctgtctccactaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544483 70 - 90481686 tgggtggatcatttgaggtcaggggttcgagaccagcct-ggtcaacgtggtgaaaccctgtctccactaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776730 70 + 3010529 tgggtggatcatttgaggtcaggggttcgagaccagcct-ggtcaacgtggtgaaaccctgtctccactaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887855 70 + 163208435 tgggtggatcatttgaggtcaggagtttgagaccagcct-ggtcaatgtggtgaaaccctgtctccactaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361463 70 - 74971481 tgggtggatcacttgaggtcaggagttcgagaacagcct-ggtcaacgtggtgaaatcttgtctccactaa i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794775 71 + 43916225 tgggtggatcacttgaggtcaggagttcgagaacagcctgggtcaacgtggtgaaaccttgtctccactaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231463 70 + 75399963 tgggtggatcacttgaggtcaggagttcgagaacagcct-ggtcaacgtggtgaaaccctgtctccactaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6785052 70 - 7209941 tgggtggatcacttgaggtcaggagttcgagaacagcct-ggtcaacgtggtgaaaccttgtctccactaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528901 70 + 3907144 tgggtggatcacttgaggtcaggagttcgagaacagcct-ggtcaacgtggtgaaaccctgtctccactaa i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6341657 70 + 6628207 caggaggatcacctgagctcaggaatttgagatcagcct-aaccaacatggtgaaactccatctctactaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3322635 68 - 5917169 cgggtggatcac--gaggtcaagagatcgagaccatcct-ggtcaacatggtgaaaccccgtctctactaa i cebCap1.NW_016107433v1 C 0 I 219 s aotNan1.NW_018500622v1 9283216 59 - 10531588 caggtggatcacttgaggtcaggaatttga------------ccaacatggtgaaaccccatctctactaa i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=637228.000000 s hg38.chr16_GL383557v1_alt 50784 134 + 89672 aaatac-aaaaattagccagccatggtggcaggcacctg-taatcccagctacttgggaagctgaggcag-gagaatcgcttgaaccc-gggaggcggaggttgcagtgggccatgatcgtgccactgcactcaagcc s panTro5.chr16 21485957 134 - 81586097 aaatac-aaaaattagccaggcatggtggcaggtgcctg-taatcccagctacttgggaagctgaggcag-gagaatcgcttgaaccc-gggaggcggaggttgcagtgggccatggtcgtgccactgcactcaagcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544553 134 - 90481686 aaatac-aaaaattagccaggcatggtggcaggtgcctg-taatcccagctacttgggaagctgaggcag-gagaatcgcttgaaccc-gggaggcggaggttgcagtgggccatggtcgtgccactgcactcaagcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776800 135 + 3010529 aaatacaaaaaattagccaggcatggtggcaggcgcctg-taatcccagctacttgggaagctgaggcag-gagaatcgcttgaaccc-gggaggcggaggttgcagtgggccatgatcgtgccactgcactcaagcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53887925 135 + 163208435 aaatac-aaaaattagccaggcatggtggcaggcgcctg-taatcccagctacttgggaagctgaagcag-gagaatcgcttgaacccgggggggcggaggttgcagtgggccatgatcatgccactgcactcaagtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361533 134 - 74971481 aaatac-aacaattagccagggatggtggtaggcgcctg-taatcccagctactcaggaagctgaggcag-gagaatcacttgatccc-cggagacagaggttgcagtgggctgtgactgtaccactgcactcaagcc i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794846 133 + 43916225 aaatac-aacaattagccagggatggtggtaggc-cctg-taatcccagctacttgggaagctgaggcagaggaaatcacttgat-cc-cggagacagaggttgccgtgggccgtgactgtgccactgcactcaagcc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231533 134 + 75399963 aaaaac-aacaattagccacggatggaggtaggcgcccg-taatcccagctactcgggaagctgagacag-gagaatcacttgatccc-cggagacagaggttgcagtgggccgtgactgtgccactgcactcaagcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6785122 134 - 7209941 aaatac-aacaattagccagggatggtggtaggcgcctg-taatcccagctactcgggaagctgaggcag-gagaatcacttgatccc-cggagacagaggttgcagtgggccgtgactgtgccactgcactcaagcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 528971 135 + 3907144 aaatac-aaaaattagccagggatggtggtaggcgcctgttaatcccagctactcgggaagctgaggcag-gagaatcacttgatccc-tggaggcagaggttgcagtgggccgtgactatgccactgcactcaagcc i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6341727 134 + 6628207 aaatac-aaaaattagctgggtggggtggtgcacacctg-ttatctcacctacttgggaggctgaggcag-gagaatcacttgaacct-gaaaggtggaggctgcaattagctgagatcataccattgcactccagtc i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9283275 134 - 10531588 aaatac-aaaaattagctgggtggggtggtgcatacctg-ttatcccacctacttgggaggctgaggcag-gggaatcacttcaatct-gaaaggtggaggctgcagtaagctgagatcataccactgcactccagcc i aotNan1.NW_018500622v1 C 0 I 4862 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=79327.000000 s hg38.chr16_GL383557v1_alt 50918 19 + 89672 tgggtgacaaagcg-agact s panTro5.chr16 21486091 19 - 81586097 tgggtgacaaagcg-agact i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544687 19 - 90481686 tgggtgacaaagcg-agact i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776935 19 + 3010529 tgggtgacaaagca-agact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888060 19 + 163208435 tgggtgacaaagtg-agact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361667 19 - 74971481 tgggtgacaaagcg-agact i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794979 20 + 43916225 tgggtgacaaagcgaagact i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231667 19 + 75399963 tgggtgacaaagcg-agact i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6785256 19 - 7209941 tgggtgacaaagcg-agact i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 529106 19 + 3907144 tgggtgacaaagag-agact i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6341861 19 + 6628207 cagtcaacagcgcg-agatt i saiBol1.JH378225 C 0 I 592 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=35108.000000 s hg38.chr16_GL383557v1_alt 50937 21 + 89672 gtctcaaaaaaaataaaaaaa s panTro5.chr16 21486110 21 - 81586097 gtctcaaaaaaaataaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544706 21 - 90481686 gtctcaaaaaaaataaaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776954 21 + 3010529 gtctcaaaaaaaataaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888079 21 + 163208435 gtttaaaaaaaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361686 15 - 74971481 gtgtccaaaaaaaaa------ i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20794999 15 + 43916225 gtgtccaaaaaaaaa------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231686 12 + 75399963 gtgtccaaaaaa--------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6785275 21 - 7209941 gtgtccaaaaaaaaaaaaaaa i manLeu1.NW_012101698v1 C 0 I 3306 s colAng1.NW_012123265v1 529125 15 + 3907144 gtgtccaaaaaaaaa------ i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I a score=14367.000000 s hg38.chr16_GL383557v1_alt 50958 7 + 89672 taaaaaT s panTro5.chr16 21486131 7 - 81586097 taaaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21544727 7 - 90481686 taaaaaT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776975 6 + 3010529 -aaaaaT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21361701 7 - 74971481 aaaaaaT i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20795014 7 + 43916225 aaaaaaT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231698 6 + 75399963 -aaaaaT i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 529140 7 + 3907144 aaaaaaT i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e nomLeu3.chr2 53888100 0 + 163208435 C a score=69371.000000 s hg38.chr16_GL383557v1_alt 50965 34 + 89672 TAAATTAAAAGTCTACTTTCCCCCTTCACCAGTT s panPan2.chr16 21544734 33 - 90481686 TAAATTAAAAGTCTA-TTTCCCCCTTCACCAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 776981 33 + 3010529 TAAATTAAAAGTCTA-CTTTCCCCTTCACCAGtt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888100 31 + 163208435 -aaaTTGAAAGTTTACTTTCCCCCTTCACCAG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361708 34 - 74971481 TTAATTAAAAGTCTACTTTCCCCCTTCACCAGTT i rheMac8.chr20 C 0 I 45 s cerAty1.NW_011999143v1 20795021 34 + 43916225 TTAATTAAAAGTCTACCTTCCCCCTTCATCAGTT i cerAty1.NW_011999143v1 C 0 I 3 s chlSab2.chr5 58231704 34 + 75399963 TTAATTAAAAGTCTACTTTCCCCCTTCACCAGTT i chlSab2.chr5 C 0 I 3 s colAng1.NW_012123265v1 529147 34 + 3907144 TTAATTAAAAGTCTACTTTCCCCCTTCACCAGtt i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=8097.000000 s hg38.chr16_GL383557v1_alt 50999 10 + 89672 Cttttttttt s panPan2.chr16 21544767 10 - 90481686 CTTTTTTTTT i panPan2.chr16 C 0 I 1774 s gorGor5.CYUI01000018v1 777014 10 + 3010529 cttttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s cerAty1.NW_011999143v1 20795058 10 + 43916225 ctttcctttc i cerAty1.NW_011999143v1 I 3 C 0 s chlSab2.chr5 58231741 10 + 75399963 CTTTCCTTTC i chlSab2.chr5 I 3 C 0 s colAng1.NW_012123265v1 529181 8 + 3907144 --cccctttc i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e rheMac8.chr20 21361742 45 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e nomLeu3.chr2 53888131 0 + 163208435 C e panTro5.chr16 21486138 0 - 81586097 C a score=8573.000000 s hg38.chr16_GL383557v1_alt 51009 34 + 89672 -------ttttttttttttttttttttttttttttgagatg s gorGor5.CYUI01000018v1 777024 17 + 3010529 -------ttttttttttt-----------------gagatg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888131 22 + 163208435 -------ttttttttttt------------tttttgagatg i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20795068 31 + 43916225 cttt---ccttttcctttcctctt-------ttttgagacg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58231751 32 + 75399963 Ctttttcctttttcctttcctc---------ttttgagaca i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 529189 34 + 3907144 cttt--cctttttcctttcctcttt-----cttttgagacg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e rheMac8.chr20 21361742 45 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=141894.000000 s hg38.chr16_GL383557v1_alt 51043 89 + 89672 gagtctc-gctgtgtcgcccagactggagtgcagcggcctgatctcagct--cactgcaagctccgcctcctgggttcatgccattctcctg s gorGor5.CYUI01000018v1 777041 89 + 3010529 gagtctc-gctctgtcgcccaggctggagtgcagcggcctgatctcagct--cactgcaagctccgcctcctgggttcatgccattctcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888153 89 + 163208435 gagtctc-gctctgtcgctcaggctggagtgcagtggcctgatctcagct--cactgcaagctccgcctcctgggttcacgccattctcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21361787 90 - 74971481 gagtctcacttctgtcacccaggctggagtgcagtggcctgatctcagcg--cactgcaagctccgcctcccgagttcacgccattctcctg i rheMac8.chr20 I 45 I 1 s cerAty1.NW_011999143v1 20795099 90 + 43916225 gagttctcactctgtcgcccaggctggagtgcaatgcgctgatctcagcgcacactgcaag-tccg-ctcccgagttcacgccattctcctg i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58231783 89 + 75399963 gagtctc-actctgtagcccaggctggagtgcagtggcctgatctcagcg--cactgtaagctccgcctcccaagttcacgccattctcctg i chlSab2.chr5 C 0 T 8401 s colAng1.NW_012123265v1 529223 89 + 3907144 gagtcac-actctgtcgcccaggctggagtgcagtggcctgatctcagca--cactgcaagctccgcctcctgagttcacgccattctcctg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=93335.000000 s hg38.chr16_GL383557v1_alt 51132 102 + 89672 tctcagcctcccgagtagctgggactacaggcacctgcccccacgccc-ggctaattttttt--atttttagtagagacggggtttcatcgtgttagccaggatg s gorGor5.CYUI01000018v1 777130 97 + 3010529 tctcagcctcccgagtagctgggactacaggcacctgccac-acgccc-ggcta----tttt--atttttagtagagacggggtttcatcgtgttagccaggatg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888242 102 + 163208435 tctcagcctcccgagtaactgggactacaggcacctgtcaccatgcct-ggctaattttttt--atttttaataaagacggggtttcaccgtgttagccaggatg i nomLeu3.chr2 C 0 I 428 s rheMac8.chr20 21361878 100 - 74971481 cctcagcc-tccaagtagctgggactacagg-gcctgtggccacgctc-ggctaattttttgcaatttttagtaagagacgggtttcaccgtgta--ccaggatg i rheMac8.chr20 I 1 C 0 s cerAty1.NW_011999143v1 20795190 100 + 43916225 -ctcagct-cccaagtagct-ggactacaggcgcctgccgccacgcccgggctaattttttgc-atttttagtagagacggggtttcaccgtgta-gccaggatg i cerAty1.NW_011999143v1 I 1 C 0 s colAng1.NW_012123265v1 529312 103 + 3907144 tctcagcctcccaagtagctgggactacaggcgcctgccgccacgccc-ggctaattttttgt-atttttagtagagacggggttttaccatgttggccaggctg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=70477.000000 s hg38.chr16_GL383557v1_alt 51234 73 + 89672 gt-ctcgatctcctgacctcgt--gatgcgcccgccttggcctcccaaagtgctgggattacaggcgtgagctacc s gorGor5.CYUI01000018v1 777227 73 + 3010529 gt-ctcgatctcctgacctcgt--gatgcgcccgccttggcctcccaaagtgctgggattacaggcgtgaactacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888772 73 + 163208435 gt-ctcgatctcctgacctcgt--gatctgcccgcctcggcctcccaaagtgctgggattacaagtgtgagtcacc i nomLeu3.chr2 I 428 C 0 s rheMac8.chr20 21361978 63 - 74971481 gtcctcgatctcctgacctcgc-------------cttggcctcccaaagtgctgggattacaggcgtaagccacc i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20795290 71 + 43916225 gt-ctcgatctcc-gacctcat--gatccgcccg-cctgcctccccaaagtgctgggattacaggcgtgagccacc i cerAty1.NW_011999143v1 C 0 C 0 s colAng1.NW_012123265v1 529415 75 + 3907144 gt-ctcaaattcccgacctcaggtgatccgcctgcctcggcctcccacagtgctgggattacaggtgtgagccacc i colAng1.NW_012123265v1 C 0 I 997 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=275614.000000 s hg38.chr16_GL383557v1_alt 51307 360 + 89672 gtgcccggccTCttttttttttttttt-----------------------gagatgaagtttccctcttgttgcccag-----actggagtgcaatggcaccatctcggctcactgcaacct-ccgcttcctgggttcaagcaattctcctgccttagcctcccgagtagctgagattacaaatgcctgcca--tcatgcccagctaatttttgtatttttagtagagacg-gggttttaccatgttggccaggctggtctcgaattcctgacctcaggcgatacggctgccttggcctcccacagtgctgggattacaggtgtgagccaccacacccagcctggagatt-gaatctttaaagaggtaactgagttaaaatgaggtcactggg s gorGor5.CYUI01000018v1 777300 368 + 3010529 atgcccggGCTCttttttttttttttt---------------ttttttttgagatgaagtctccctctagttgcccag-----actggagtgcaatggcaccatctcggctcactgcaacct-ccgcttcctgggttcaagcaattctcctgccttagcctcccgagtagctgagattacaaatgcctgcca--tcatgcccagctaatttttgtatttttagtagagacg-gggttttaccatgttggccaggctggtctcgaattcctgacctcaggcgatacggctgccttggcttcccacagtgctgggattacaggtgtgagccaccacacccagcctggagata-gaatctttaaagaggtaactgagttaaaatgaggtcactggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53888845 359 + 163208435 gcgcccggccCtttttttttttctttt-----------------------gagatgaagtctccctcttgttgcccag-----gctggagtgcaatggcaccatctc-gctcgttgcaacct-ccgcttcgcgggttcaagtaattctcctgccttagcctcccgagtagctgagattacaaacgcctgcca--tcatgcccagctaatttttgtatttttagtagacttg-gggttttaccatgttggccaggctggtcttgaattcctgacctcaggtcatctgcctgccttggcctcctacaatgctgggattacaggtgtgagccaccacacccagcctggagatc-gaatctttaaagaggtaactgagttaaaatgaggccactggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21362041 390 - 74971481 atgcccagGCTCtttattttttattttttatttatttatttattttttttgagatgaagtctcccttttggagtgcaagggagggaggagtgcaatggcaccatctcggctcactgtaacct-ccgcttcctgagttcaagcaattctcctgccttagcctcccgagtagctaagattacaggtgcctgccatctcatgctcagctaatttttgtatttttagtagagatg-gggttttaccatgttggccaggctggtctcaaattcccaacctcaggtgatccgcctgcctcggcctcccacagtgctgggattacaggtgtgagccaccacacccagcctggagatc-caatctttaaagaggtaactaagttaaaatgaggtcactggg i rheMac8.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20795361 367 + 43916225 atgcccaggcctttttttttttttttt---------------ttttttttgagatgaagtctcccttttggagtgcaa-----ggaggagtgcaatggcaccatctcggctcactgcaacctcccgcttcctgggttcaagcaattctcctgccttagcctcccgaggagctaagattacagtggcctgcca--tcatgctcagctaatttttgtattttta-tagagatgtgggttttaccgtgtt-gccaggctgg--tcaaattcccaacctcaggtgatccgcctgcctcgcctccccacagtgctgggattacaggtgtgagccaccacacccagccTGGAGATCTCAAtctttaaagaggtaactaagttaaaatgaggtcactggg i cerAty1.NW_011999143v1 C 0 I 2555 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 529490 997 + 3907144 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=297141.000000 s hg38.chr16_GL383557v1_alt 51667 578 + 89672 gtgggccctaatccagtttgactgttttccttataagaagagatgagggcagagatacatgcatggagggaagaccatgggaagatgaagggagaagatggtcatttacaaggcaaggagagaggcctcagaagaaaccaatccagcctggcgtggtggctcatgcctgtaaccacagcacatcaggaggcaggaggatcacttgagtccaggagttcgacaccagcctgggcaatatagcaagacctcgtctctaccaaaaaacaaaaagcta-aaaaaCAAggccaggcacgatggctcacatctgtaatctcagcattttgggaggctgaggctggcagatcacttgaggtcaagagttcaagaccagcctggccaacatggtaaaactccatctctactaaaaatacaaaaattagctgggcatggtgttgcatggttgtaatcccagctactcaggaggctgaggtaggagaatcacttgaacctggaaggcggaggttgcagtgatccaagattgctccactgcactccagcctgggcaacagagtgagactctgtctcaaaacaaCCACCAC s gorGor5.CYUI01000018v1 777668 578 + 3010529 gtgggccctaatccagtttgactgttttccttataagaggagatgagggcagagatacatgcatggagggaagaccatgggaagatgaagggagaagatggtcatttacaaggcaaggagagaggcctcagaagaaaccaatccagcctggcgtggtggctcatgcctgtaaccacagcacatcaggaggcaggaggatcacttgagtccaggagtttgacaccagcctgggcaatatagcaagacctcgtctctacaaaaaaacaaaaagcta-aaaaaCAAggccaggcacgatggctcacgtctgtaatctcagcactttgggaggctgaggctggcagatcacttgaggtcaagaattcaagaccagcctggccaacatggtaaaactccatctctactaaaaatacaaaaattagctgggcatggtgttgcatggttgtaatcccagctactcaggaggctgaggtaggagaatcacttgaacctggaaggtggaggttgcagtgatccaagatcgctccactgcactccagcctcggcaacagagtgagactctgtctcaaaacaaccaccac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53889204 579 + 163208435 gtgggccctaatccagtttgactgttgtccttataagaggagatgagggcagagacatatgcatagagggaagaccatgggaagatgaagggagaagatggtcatttacaaggcaaggagagaggcctcagaagaaaccaatccAgcctggcgtggtggctcatgcctgtaaccacagcacatcaggaggcaggaggatcacttgagtccaggagttcgacaccagcctgggcaatatagcaagacctcgtctctacaaaaaaataaaaagcaagaaaaaCAAggccaggcatgatggctcacgtctgtaatctcagcactttgggaggctgaggctggccaatcacttgaggtcaagaattcaagaccagcctggccaacatggtgaaactctctctctactgaaaatataaaaattaactgggcatggtgttgcatggttgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccaagatcgctccactgcactccagcctgggcaacagagcgagactctgtctcaaaaCCACCACCAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21362431 557 - 74971481 gtgggccctaatccagtttgactgttgtccttataagaggagatgagggc---------------------agaccatgggcagatgaagggagaagatggtcatttacaaggcaaggagagaggcctcagaagaaaccaatccagcctggcagggtggctcatgcctgtaaccacagcatgtcgggaggcaggagtatcacttgagtccaggagtttgacaccagcctgggcaatacagcaagacctcgtctctacaaaaaaacaaaaaGCGG-AAAAACAAggctaggcatgatggctcatgcctgtaatctcagcacttcgggaggctgaggctggtcgatcacttgaggtcaagagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcctggcgttgcacggttgtaatcccagctactcaggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgatccgagatcgctccattgcactccagcctgggcaacagagtgagactctgtctcaaaaCCACCACCAC i rheMac8.chr20 C 0 I 653 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 529490 997 + 3907144 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=2568.000000 s hg38.chr16_GL383557v1_alt 52245 19 + 89672 CACCAAaaacaaacaaaca s gorGor5.CYUI01000018v1 778246 19 + 3010529 caccaaaaacaaaaaaaca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53889783 16 + 163208435 CACCAAAa--aaaaaaac- i nomLeu3.chr2 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e rheMac8.chr20 21362988 653 - 74971481 I e macFas5.chr20 21071987 0 - 78541002 C e colAng1.NW_012123265v1 529490 997 + 3907144 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=-5246.000000 s hg38.chr16_GL383557v1_alt 52264 15 + 89672 aacaaacaaac--------------------------aaaA- s gorGor5.CYUI01000018v1 778265 7 + 3010529 aacgaa----------------------------------a- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53889799 1 + 163208435 ----------------------------------------c- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21071987 42 - 78541002 aacaaaaaAaccaccaccaccaccaccaccaccaccaaaaat i macFas5.chr20 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e rheMac8.chr20 21362988 653 - 74971481 I e colAng1.NW_012123265v1 529490 997 + 3907144 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=141190.000000 s hg38.chr16_GL383557v1_alt 52279 155 + 89672 aatcctgctgacaccttgatctcaatctcagacctttagcctccagaactatgagaaaataaatttctggtctggcacagtggctcacgcctataatcccagcactttgggaggccaaggcaggtggattgcttgagttcaggagttctagacca s gorGor5.CYUI01000018v1 778272 155 + 3010529 aatcctgctgacaccttgatctcaatctcagacctttagcctccagaactatgagaaaataaagttctggtctggcacagtggctcacgcctattatcccagcactttgggaggccaaggcaggtggattgcttgagttcaggagttctagacca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53889800 155 + 163208435 aatcctgctgacaccttgatctcaatctcagacttttagtctccagaactatgagaaaataaatttctggtctggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggtggattgcttgagttcaggagttctagacca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21363641 155 - 74971481 aatcctgctgacaccttgatctcaatctcagacttttagcctccagaactatgagaaaataaatttctggtctggcatagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggtgggttgcttgagttcaggagttctagacct i rheMac8.chr20 I 653 C 0 s macFas5.chr20 21072029 155 - 78541002 aatcctgctgacaccttgatctcaatctcagacttttagcctccagaactatgagaaaataaatttctggtctggcatagtggctcacgcctgtaatcccagcactttgggaggccaaggcaggtgggttgcttgagttcaggagttctagacct i macFas5.chr20 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e colAng1.NW_012123265v1 529490 997 + 3907144 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e chlSab2.chr5 58231872 8401 + 75399963 T e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=73111.000000 s hg38.chr16_GL383557v1_alt 52434 56 + 89672 gcctgggcaacatagtgagaccccatctctac-aaaaaaatagatccttgattaaaa s gorGor5.CYUI01000018v1 778427 56 + 3010529 gcctgggcaacatagtgagaccccatctctac-aaaaaaatagatccttgattaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53889955 56 + 163208435 gcctgggcaacatagtgacaccccatctctac-aaaaaaatagatccttgattaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21363796 57 - 74971481 gcctgggcaacatagtgagaccccatctctacaaaaaaaatagatccttgattaaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072184 57 - 78541002 gcctgggcaacatagtgagaccccatctctacaaaaaaaatagatccttgattaaag i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58223471 57 + 75399963 gcctgggcagcatagtgagaccccatctctacaaaaaaAATAGATCCTTGATTaaaa i chlSab2.chr5 T 8401 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e colAng1.NW_012123265v1 529490 997 + 3907144 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=33354.000000 s hg38.chr16_GL383557v1_alt 52490 30 + 89672 --aaaaaaaaaaaa--aagaaaaaggccaggtgc s gorGor5.CYUI01000018v1 778483 26 + 3010529 --aaacaaaaaa------gaaaaaggccaggtgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890011 26 + 163208435 --aaataaaaaa------taaaaaggccaggtgc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21363853 33 - 74971481 -aaaaaaaaagaaagaaagaaaaaggccaggtgt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072241 33 - 78541002 -aaaaaaaaagaaaggaagaaaaaggccaggtgc i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58223528 29 + 75399963 -aaaaaaaaaga----aagaaaaaGGCCAGGTGC i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 530487 30 + 3907144 aaaaaaaaaaaa----aagaaaaCggccaggtgc i colAng1.NW_012123265v1 I 997 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3322703 219 - 5917169 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=89072.000000 s hg38.chr16_GL383557v1_alt 52520 42 + 89672 ggtggctcgtgcctgtaatcccaacactttgggaggccgaga s gorGor5.CYUI01000018v1 778509 42 + 3010529 ggtggctcgtgcctgtaatcccaacactttgggaggccgaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890037 42 + 163208435 ggtggcttgcgcctgtaatcccaacactttgggaggccgaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21363886 42 - 74971481 agtggcttgcgcctgtaatcccaacactttgggaggctgaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072274 42 - 78541002 agtggctcgcgcctgtaatcccaacactttgggaggttgaag i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58223557 36 + 75399963 AGC------cgcctgtaatcccaacactttgggaggctgagg i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 530517 42 + 3907144 agtggctcacgcctgtaatcccaacactttgggaggccgagg i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3322922 42 - 5917169 ggtggctcacacctgtaatcccagcactttgggagaccgaga i cebCap1.NW_016107433v1 I 219 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e calJac3.chr20 21531376 0 - 44557958 C e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=382616.000000 s hg38.chr16_GL383557v1_alt 52562 129 + 89672 cgggtggatcacttgagatc-aggagtttgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagctggatgtggtagcacacacttattaccccagctacttgggagg s gorGor5.CYUI01000018v1 778551 129 + 3010529 cgggtggatcacttgagatc-aggagtttgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtagcacacacttattaccccagctacttgggagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890079 129 + 163208435 cgggtggatcacttgagatc-aggagtttgagaccagcctgaccaacatggtgaaacgccgtctctactaaaaatacaaaaattagctgggtgcagtagcacacacttattaccccagctacttgggagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21363928 129 - 74971481 cgggtggatcacttgagatc-aggagtttgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtagcacacacatattaccccagctacttgggagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072316 129 - 78541002 cgggtggatcacttgagatc-aggagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtagcacacacatattaccccagctacttgggagg i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58223593 130 + 75399963 cgggtggatcacttgagatcaaggagtttgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtagcacacacctattaccccagctacttgggagg i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 530559 129 + 3907144 cgggtggatcacttgagatc-aggagtttgagaccggcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtagcacacacctattaccccagctacttgggagg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531376 118 - 44557958 caggtggatcacttgaggtc-aggaatttg-----------accaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtggggtggtgcacacctgttatcccacctacttgggagg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3322964 128 - 5917169 caggtggatcacttgaggtc-aggaatttgagatcagcctaaccaacat-gtgaaaccccatctctactaaaaatacaaaaattagctgggtggggtggtgcacacctgttttctcacctacttgggagg i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panPan2.chr16 21544777 1774 - 90481686 I e macNem1.NW_012011355v1 14468994 733 + 26466322 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=482689.000000 s hg38.chr16_GL383557v1_alt 52691 159 + 89672 ctgaggcaggagaagtgcttgaaccctagaggcagaggctgcagtgagctgagatcgtgccactgcactccagcctgggcatcagagtgagactctattccaaaaaaaaaaaa---gaaagaaaaa-gaaaaaatgacagtttgggctatt-------aaaaaaaaaaat- s gorGor5.CYUI01000018v1 778680 163 + 3010529 ctgaggcaggagaagtgcttgaaccctagaggcagaggctgcagtgagctgagatcgtgccactgcactccagcctgggcatcagagtgagactctattccaaaaaaaaaaaaaaagaaagaaaaaagaaaaaatgacagtttgggctatt-------aaaaaaaaaaat- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890208 158 + 163208435 ctgaggcaggtgaattgcttgaaccctagaggcagaggctgcagtgagctgagatcatgccactgcactccagcctgggcatcagagtgagactctatcttgaaaaaaaaaaa-----aagaaaaa-gaaaaaatgacagtttgggctatt--a----aaaaaaaaaaat- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364057 156 - 74971481 ctgaggcaggagaattgcttgaaccctagagacagaggctgcagtgagctgagatcatgccactgtactccagcctgggcatcagagtgagactttatct---aaaaaaaaaa---aaaaaaaaaa-gaaaaagtgacagtttgggctatt-------aaaaaaaaaaaa- i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21072445 155 - 78541002 ctgaggcaggagaattgcttgaaccctagagacagaggctgcagtgagctgagatcatgccactgtactccagcctgggcatcagagtgagactttatct----taaaaaaaa---aaaaaaaaaa-gaaaaagtgacagtttgggctatt-------aaaaaaaaaaaa- i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14469727 151 + 26466322 ctgaggcaggagaattgcttgaaccctagagacagaggctgcagtgagctgagatcatgccactgtactccagcctgggcatcagagtgagactttatct--------aaaaa---aaaaaaaaaa-gaaaaaGTGACAGTTTGGGCTATT-------Aaaaaaaaaaaa- i macNem1.NW_012011355v1 I 733 I 1 s chlSab2.chr5 58223723 157 + 75399963 ctgaggcaggagaattgcttgaaccctagagacagaggctgcagtgagctgagatcatgccactgtactccagcctgggcatcacagtgagactctatctc--acaaaaaaaa---aaaagaaaaa-gaaaaCGTGATAGTTTGGGCTATT-------aaaaaagaaaaa- i chlSab2.chr5 C 0 I 2 s colAng1.NW_012123265v1 530688 159 + 3907144 ctgaggcaggagaattgcttgaaccctagagacagagactgcagtgagctgagatcacaccgctgtactccagcctgggcatcagagtgagactctatctcaaaaaaaaaaga---aaaagaaaaa-gaaaaagTGACAGTTTGGGTTATT-------Aaaaaaaaaaaa- i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21531494 153 - 44557958 ctgaggcaggagaatcacttgaacctgaaaggtggaggctgcagtaagctgagatcataccactgcactccagcccagtcaacagagcaagattccatctcaaaaaa------------aGGGGGA-GGGAAAA-GACAGTTTGGGATATTTAA----AAACAAAaaaaat i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3323092 166 - 5917169 ctgaggcaggaaaatcacttgaacctcaaaggtagaggctgcaataagctgagatcataccactgcactccagcccagtcaacagagcgagattccatctcaaaaaaaaaaaa---aacaaaggga-aaaaaaa-GACAGTTTGGGGTATTTAAAAacaaacaaacaaaaa i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panPan2.chr16 21544777 1774 - 90481686 I e manLeu1.NW_012101698v1 6785296 3306 - 7209941 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=314663.000000 s hg38.chr16_GL383557v1_alt 52850 70 + 89672 tagccaggtgtagtggcgcacacctgtagttct---agctactcaggatgctgaggccagaggattgcttgag s gorGor5.CYUI01000018v1 778843 70 + 3010529 tagccaggtgtagtggcgcacacctgtagttct---agctactcaggatgctgaggccggaggattgcttgag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890366 70 + 163208435 tagccaggtgtggtggcgcacacctgtagttct---agctactcaggatgctgaggatggaggattgcttgag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364214 70 - 74971481 tagccaggtgtggtggcgcacacctgtagttct---agctactcacgatgctgaggctggaggactgcttgag i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21072601 70 - 78541002 tagccaggtgtggtggcgcacacctgtagttct---agctactcacgatgctgaggctggaggactgcttgag i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14469879 70 + 26466322 tagccaggtgtggtggcgcacacctgtagttct---agctactcacgatggtgaggctggaggactgcttgag i macNem1.NW_012011355v1 I 1 C 0 s chlSab2.chr5 58223882 73 + 75399963 tagccaagtgtggtggcgcacacctgtagttctagaagctactcacgatgctgaggctggaggactgcttgag i chlSab2.chr5 I 2 C 0 s manLeu1.NW_012101698v1 6788602 70 - 7209941 tagccaggtgtggtggcgcacacctgtagttct---agctactcacgatgctgaggctggaggactgcttgag i manLeu1.NW_012101698v1 I 3306 C 0 s colAng1.NW_012123265v1 530848 70 + 3907144 tagccaggtgtggtggtgcacacctgtagttct---agctactcacgatgctgaggctggaggattgcttgag i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21531647 70 - 44557958 tagccaggtgtggtggcgtgcatctgtagttcc---agttactctggatgctgaggtgggaggatgacttgag i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3323258 70 - 5917169 tagccaggtgtggtggcgtgcatctgtagttcc---agctaccctggatgctgaggtgggaggatgacttgag i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panPan2.chr16 21544777 1774 - 90481686 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=75713.000000 s hg38.chr16_GL383557v1_alt 52920 14 + 89672 cccaggggt-----taagg s panPan2.chr16 21546551 14 - 90481686 cccaggggt-----taagg i panPan2.chr16 I 1774 C 0 s gorGor5.CYUI01000018v1 778913 14 + 3010529 cccaggggt-----tacag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890436 14 + 163208435 cccaggggt-----taagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364284 14 - 74971481 cccaggggt-----taagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072671 14 - 78541002 cccaggggt-----taagg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469949 14 + 26466322 cccaggggt-----taagg i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58223955 14 + 75399963 cccaggggt-----taagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788672 14 - 7209941 cccaggggt-----taagg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 530918 14 + 3907144 cccaggggt-----taagg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531717 19 - 44557958 cccaggggttcgagtgaga i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3323328 14 - 5917169 cccaggggt-----taaga i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e saiBol1.JH378225 6341880 592 + 6628207 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=471235.000000 s hg38.chr16_GL383557v1_alt 52934 85 + 89672 ctgca-----atgagtcaagattgagcaactgca-atccagcctgggcaacagagccagaccctgtctc-------caaaaaaaa-aaaa------agaagttat s panPan2.chr16 21546565 84 - 90481686 ctgca-----atgagtcaagattgagcaactgca-atccagcctgggcaacagagccagaccctgtctc-------caaaaaaaa-aaaa-------gaagttat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 778927 87 + 3010529 ctgca-----atgagtcaagattgagcaactgca-atccagcctgggcaacagagccagaccctgtctc-------caaaaaaaa-aaaa----aaagaagttat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890450 90 + 163208435 ctgca-----gtgagtcaagatcgagcaactgca-atccagcctgggcaacagagccagaccctgtctc-------aaaaaaaaa-aaaa-aaaaaagaagttat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364298 103 - 74971481 ctgcagtgaggtgagtcaagatcaagcaactgca-atccagcctgggcaacagagccagaccctgtttcaaaaaaaaaaaaaaaa-aaaaaaaagaagaagttct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072685 103 - 78541002 ctgcagtgaggtgagtcaagatcaagcaactgca-atccagcctgggcaacagagccagaccctgtctcaaaaaaaaaaaaaaaa-aaaaaaaaaaaGAAgttct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14469963 91 + 26466322 ctgcagtgaggtgagtcaagatcaagcaactgca-atccagcctgggcaacagagccagac------------aaaaaaaaaaaa-aaaaaaaaaaagaaGttct i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58223969 96 + 75399963 ctgcagtgaggtgagtcaagatccagcaactgca-atccagcctgggcaacagagccagatcctgtctc-------aaaaaaaaa-aaaaaaaaaaagaaGttct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788686 96 - 7209941 ctgcagtgaggtgagtcaagatcaagcaactgca-atccagcctgggcaacagagccagaccctgtctc-------aaaagaaaa-aaaaaaaaaaagaaGttct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 530932 100 + 3907144 ctgcagtaaagtgagtcaagatcgagcaactgca-atccagcctaggcaacagagccagaccctgtctc---aaaaaaaaaaaaa-aaaaaaaaaaagaaGttct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531736 82 - 44557958 ctgca-----gtgagtcaagatcgagcaactgaa-ttccagcctgggcaacagagccagatcttgtctc-------aaaaaaaaa-aaaa---------aGttct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342472 84 + 6628207 ctgta-----gtgagtcaagatcgagcaactgaatttccagcctgggcaacagagccagatcctgtctc-------aaaaaaaaataaaa---------aGttct i saiBol1.JH378225 I 592 C 0 s cebCap1.NW_016107433v1 3323342 81 - 5917169 ctgca-----gtcagtcaagatcgagcaactgaa-ttccagcctgggcaacagagccagatcctgtctc-------aaaaaaaa--aaaa---------aGttct i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80466781 1429 + 88915250 I e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=239645.000000 s hg38.chr16_GL383557v1_alt 53019 36 + 89672 gttgttgaagccatcc----caatagtgc-tttgttatggc s panPan2.chr16 21546649 36 - 90481686 gttgttgaagccatcc----caatagtgc-tttgttatggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779014 36 + 3010529 gttgttgaagccatcc----caatagtgc-tttgttatggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890540 36 + 163208435 gttgttgaagccatcc----caatagtac-tttgttatggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364401 36 - 74971481 gttgttgaagccatcc----caatagtac-tttgttatggc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072788 36 - 78541002 gttgttgaagccatcc----caatagtac-tttgttatggc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470054 36 + 26466322 gttgttgaagccatcc----caatagtac-tttgttatggc i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58224065 36 + 75399963 gttgttgaagccatcc----caatagtac-tttgttatggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788782 36 - 7209941 gttgttgaagccatcc----caatagtac-tttgttatggc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531032 36 + 3907144 gttgttgaagccatcc----cagtagtac-tttgttatggc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531818 37 - 44557958 gttgttgaggccacct----gtatagtacttttgttaaggc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342556 36 + 6628207 gttgttgaggccattc----ctatagtac-tttgttaaggc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323423 36 - 5917169 gttgttgaggccatcc----ctataatac-tttgataaggc i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80468210 38 + 88915250 gttatttaagcccccctggactgtgatac---tgttatggc i canFam3.chr5 I 1429 C 0 e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e dasNov3.JH569970 926646 170 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=115544.000000 s hg38.chr16_GL383557v1_alt 53055 15 + 89672 agcccta--------acaTAGAC s panPan2.chr16 21546685 15 - 90481686 agcccta--------acaTAGAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779050 15 + 3010529 agcccta--------acaCAGAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890576 23 + 163208435 agccctaacatacttacaTAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364437 23 - 74971481 agccctaacatacttacaTAGAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072824 23 - 78541002 agccctaacatacttacaTAGAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470090 23 + 26466322 agccctaacatacttacaTAGAT i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58224101 23 + 75399963 agccctaacatacttacaTAGAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788818 23 - 7209941 agccctaacatacttacaTAGAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531068 23 + 3907144 agccctaacaTCCTTACATAGAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531855 23 - 44557958 agccctaacaaacttatataGAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342592 23 + 6628207 agccctaacaaacttatataGAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323459 23 - 5917169 agccctaacaaacttatataGAC i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80468248 23 + 88915250 aaacttaacGGTCACATATAGAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 926816 15 + 1009443 AGTCCT--------TCCATGGAC i dasNov3.JH569970 I 170 C 0 e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cerAty1.NW_011999143v1 20795728 2555 + 43916225 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=66655.000000 s hg38.chr16_GL383557v1_alt 53070 8 + 89672 CCCACGTC s panPan2.chr16 21546700 8 - 90481686 CCCACGTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779065 8 + 3010529 CCCACGTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890599 8 + 163208435 CGCACGTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364460 8 - 74971481 CCCACGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072847 8 - 78541002 CCCACGTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470113 8 + 26466322 CCCACGTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798283 8 + 43916225 CCCACGTC i cerAty1.NW_011999143v1 I 2555 C 0 s chlSab2.chr5 58224124 8 + 75399963 CCCACATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788841 8 - 7209941 CCCACGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531091 8 + 3907144 CCCACGTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531878 8 - 44557958 CCCAAGTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342615 8 + 6628207 CCCAAGTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323482 8 - 5917169 CCCAAGTT i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80468271 8 + 88915250 CCCACATT i canFam3.chr5 C 0 I 4 s dasNov3.JH569970 926831 7 + 1009443 -CCCTATC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54933715 718 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2942860 693 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=1322923.000000 s hg38.chr16_GL383557v1_alt 53078 120 + 89672 ----ACCTACACAACAGCCTGTT---------TTTTGCCTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTACTG--TCATTCCATTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA s panPan2.chr16 21546708 120 - 90481686 ----ACCTACACAACAGCCTGTT---------TTTTGCCTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTACTG--TCATTCCGTTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779073 120 + 3010529 ----ACCTACACAACAGCCTGTT---------TTTTGCCTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTACTG--TCATTCCGTTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890607 120 + 163208435 ----ACCTACACAACAGCCTGTT---------TTTTCCCTCCCTAATTTCCAGTCTGTTCTGCC----CCTT----ACACA----AATGCGCATTTTTATTG--TCATTCCATTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364468 120 - 74971481 ----ACCTATACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTTCTG--TCATTCCATTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072855 120 - 78541002 ----ACCTATACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTTCTG--TCATTCCATTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470121 120 + 26466322 ----ACCTATACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTTCTG--TCATTCCATTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798291 120 + 43916225 ----ACCTATACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTTCTG--TCATTCCGTTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224132 120 + 75399963 ----ACCTATACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTTCTG--TCATTCCGTTGAATGTGTAAGTGACTCACAGCTGTGTTTTCCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788849 120 - 7209941 ----ACCTATACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTTCTG--TCATTCCGTTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531099 120 + 3907144 ----ACCTACACAACAGCCTGTT---------TTTTGACTCCCTAACTTCCAGTCTCTTCTGCC----CCTT----ACATA----AATGGGCATTTTTTCTG--TCATTCCATTGAATGTGTGAGTGACTCACAGCTGTGTTTTCCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21531886 120 - 44557958 ----GCCTACACAATAGCCTGAT---------TTTTGCCTCCCTAATTTCCAGTCTCTTTTGCC----CCTT----ACACA----AATGGGCATTTTTACTG--TCATTCTGTTGAATGTGTGAGTGACTCACAACTGTGTTTTCCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342623 116 + 6628207 ----GCCTACACAACAGTCTGTT---------TTTTG----CCTGATTTCCAGTCTCTTCTGCC----CCTT----ACACA----AATGGGCATTTTTACTG--TCATTCTGTTGAATGTGTGAGTGACTCACAACTGTGTTTTCCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323490 120 - 5917169 ----GCCTACACAACAGCCTGTT---------TTTTGCCTCCCTAATTTCCAGTCTCTTTTGCC----CCTT----ACACA----AATGGGCATTTTTACTG--TCATTCTGTTGAATGTGTGAGTGACTCACAACTGTGTTTTCCA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54934433 124 + 72247402 ----ACCTACACAACAGCCTGCT---------TTTTGCCTCCCTAACTTCCAGTCTCTTATGCCCCTTCCTT----ACACA----GATGGGCATTTTTACCG--TCATTCCTTTCAATGTGTCAGTGACTCACAACTATGTTTTCCA i micMur3.chr20 I 718 C 0 s proCoq1.NW_012152729v1 2943553 124 + 9850184 ----ACCTACACAACAGCCTGCC---------TTCCGCCTCCCTAACTTCCAGTCTCGTATGCCCCTTCCTT----ACACA----GATGGGCATTTTTACTG--TCATTGCTTTGAATGTGTCAGTGACTCACAGCTATGTTTTCCA i proCoq1.NW_012152729v1 I 693 C 0 s canFam3.chr5 80468283 124 + 88915250 ----ACCTACACAACAGCCTTGTTTGTTGTTGTTTTGCCTCCCTG----CTAGTCTCCTCTGCC----CCTT----ACACATACCAGTGGGCATTTTAACTGTATCGCTCCTTCCAATCTG--AGTAGATAAC-----TGTTTTCCA i canFam3.chr5 I 4 I 196 s dasNov3.JH569970 926838 112 + 1009443 AAGAACCTCCATTACATCATGTT---------TTTTGCCTCCCTAATTTC-AGTCTTTTCTGCC----GCTTGTTCACCCA----AATAGG-------------CCGTTCCTTTGCATCTG----TAACACACAACTATATTTTCTA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=4640.000000 s hg38.chr16_GL383557v1_alt 53198 1 + 89672 -C s panPan2.chr16 21546828 1 - 90481686 -C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779193 1 + 3010529 -C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890727 1 + 163208435 -C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364588 1 - 74971481 -C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072975 1 - 78541002 -C i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470241 1 + 26466322 -C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798411 1 + 43916225 -C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224252 1 + 75399963 -C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788969 1 - 7209941 -C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531219 1 + 3907144 -C i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532006 1 - 44557958 -C i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342739 1 + 6628207 -C i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323610 1 - 5917169 -C i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54934557 1 + 72247402 -C i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2943677 1 + 9850184 -C i proCoq1.NW_012152729v1 C 0 C 0 s dasNov3.JH569970 926950 1 + 1009443 A- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80468407 196 + 88915250 I e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13707866 1816 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=935177.000000 s hg38.chr16_GL383557v1_alt 53199 71 + 89672 TGAATGAAAATTCTGGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT s panPan2.chr16 21546829 71 - 90481686 TGAATGAAAATTCTGGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779194 71 + 3010529 TGAATGAAAATTCTGGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890728 71 + 163208435 TGAATGAAAATTCTGGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTACTTCTTACTACATGTTGGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364589 71 - 74971481 TGAATGAAAATTCTGGACCACAGACAGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21072976 71 - 78541002 TGAATGAAAATTCTGGACCACAGACAGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470242 71 + 26466322 TGAATGAAAATTCTGGACCACAGACAGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798412 71 + 43916225 TGAATGAAAATTCTAGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224253 71 + 75399963 TGAATGAAAATTCTAGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6788970 71 - 7209941 TGAATGAAAATTCTAGACCACAGACTGGAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATATTGGCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531220 71 + 3907144 TGAATGAAAATTCTGGACCACAGACTGGAAGGCCTAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532007 77 - 44557958 TGAATGAAAATTCTGAACCACAGACTGGAAGGCCCAT-CC-CAACTGCC-ACTGGTCTTACTTCTCACTACATGTTGGCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342740 78 + 6628207 TGAATGAAAATTCTGAACCACAGACTGGAAGGCCCAC-CC-CAACTGCCAACTGGTCTTACTTCTCACTACATGTTGGCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323611 78 - 5917169 TGAATGAAAATTCTGAACCACAGACTGGAAGGCCCAC-CC-CAACTGCCAACTGGTCTTACTTCTCACTACATGTTGGCT i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54934558 71 + 72247402 TGAATGAAAATTCTTAACCACAGATTGTAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i micMur3.chr20 C 0 I 978 s proCoq1.NW_012152729v1 2943678 71 + 9850184 TGAATGAAAATTCTTAACCACAGACTGTAAGGCCCAC-CC-CA-------ACTGGTCTTATTTCTCACTACATGTTGGCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13709682 65 + 13852661 TGAATGAAAATTCTTAACCACA-ACTGGAAAGCCCAC-CC-CA-------ATTGCTCTTATTCTTCAC-----GTTGGCT i otoGar3.GL873566 I 1816 C 0 s canFam3.chr5 80468603 72 + 88915250 TGAATGAAAATTCCTAACCACAGACCTCAAGGTCCATGCC-TA-------CCTGGTCTTATTTGTCACTACCTGTCGGCT i canFam3.chr5 I 196 C 0 s dasNov3.JH569970 926951 70 + 1009443 TGATTGAAAATTCTTAAC--CAGACTTGAAGGTCTAC-CCTTA-------ACTGGTCCTATTTCTTATTACATGTTAACT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panTro5.chr16 21486138 0 - 81586097 C a score=455714.000000 s hg38.chr16_GL383557v1_alt 53270 49 + 89672 CAAGGACTCTGTATCCAAAACAACTTGTCTTTTCCACATACTTTCCTAA s panPan2.chr16 21546900 49 - 90481686 CAAGGACTCTGTATCCAAAACAACTTGTCTTTTCCACATACTTTCCTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779265 49 + 3010529 GAAGGACTCTGTATCCAAAACAACTTGTCTTTTCCACATACTTTCCTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890799 49 + 163208435 CAAGAACTCTGTATCCAAAACAACTTGTCTTTTCCACATACTTTCCTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364660 49 - 74971481 CAAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATATTTTCCTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21073047 49 - 78541002 CGAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATACTTTCCTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470313 49 + 26466322 CAAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATACTTTCCTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798483 49 + 43916225 CAAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATACTTTCCTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224324 49 + 75399963 GAAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATACTTTCCTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789041 49 - 7209941 CAAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATACTTTCCTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531291 49 + 3907144 CAAGGACTATGTATCCAAAACGACTTGTCTTTTCCACATACTTTCCTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532084 43 - 44557958 CAAGGACTCTGTATTG-AAATGACTTTTCTTTTCCACATACTT-----A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342818 44 + 6628207 CAAGGACTCTGTATTGAAAATGACTTATCTTTTCCACATACTT-----A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323689 42 - 5917169 CAAGGACTC--TATTGAAAATGACTTATCTTTTCCACATACTT-----A i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2943749 45 + 9850184 TAAAGACTTTGAATCAAAATCTACTTGTCTTTTCCACACACTTT----A i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13709747 45 + 13852661 TTAAGACTCTGCATCCAAATTTATTTGTCTTTTCCACACACTTT----A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80468675 49 + 88915250 TAAAGTTTCCTTACCCAAGTTTACTTATCTTTTCCACACTAttttttaa i canFam3.chr5 C 0 I 185 s dasNov3.JH569970 927021 49 + 1009443 TAAGGAGTCTATATCCAAATCTACTTGTCTTTTCCACACACTTTTCCAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panTro5.chr16 21486138 0 - 81586097 C a score=205491.000000 s hg38.chr16_GL383557v1_alt 53319 17 + 89672 ACTGCTTAGCTTCCTTC s panPan2.chr16 21546949 17 - 90481686 ACTGCTTAGCTTCCTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779314 17 + 3010529 ACTGCTTAGCTTCCTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890848 17 + 163208435 ACTGCTTAGCTTCCTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364709 17 - 74971481 ACTGCTTACCTTCCTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21073096 17 - 78541002 ACTGCTTACCTTCCTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470362 17 + 26466322 ACTGCTTACCTTCCTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798532 17 + 43916225 ACTGCTTAGCTTCCTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224373 17 + 75399963 ACTGCTTAGCTTCCTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789090 17 - 7209941 ACTGCTTAGCTTCCTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531340 17 + 3907144 ACTGCTTAGCTTCCTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532127 16 - 44557958 ACTG-TTAGCTTCCTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342862 17 + 6628207 ACTGCTTAGCTTCCTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323731 17 - 5917169 ACTGCTTAGCTTCCTTT i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2943794 17 + 9850184 ACTGCTTCGCTTCCTTC i proCoq1.NW_012152729v1 C 0 I 735 s otoGar3.GL873566 13709792 17 + 13852661 ACTGCTTAACTTTCTTC i otoGar3.GL873566 C 0 I 4 s canFam3.chr5 80468909 17 + 88915250 ACTGATTAGCTTTCCTC i canFam3.chr5 I 185 C 0 s dasNov3.JH569970 927070 17 + 1009443 ACTGCTCAGCTTCCCTC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panTro5.chr16 21486138 0 - 81586097 C a score=157022.000000 s hg38.chr16_GL383557v1_alt 53336 15 + 89672 TGTGGAAACCACTCT s panPan2.chr16 21546966 15 - 90481686 TGTGGAAACCACTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779331 15 + 3010529 TGTGGAAACCACTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890865 15 + 163208435 TGTGGAAACCACTCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364726 15 - 74971481 TGTGGAAACTACTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21073113 15 - 78541002 TGTGGAAACTACTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470379 15 + 26466322 TGTGGAAACTACTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798549 15 + 43916225 TGTGGAAACTACTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224390 15 + 75399963 TGTGGAAACTACTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789107 15 - 7209941 TGTGGAAACTACTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531357 15 + 3907144 TGTGGAAACCACTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532143 13 - 44557958 TGTGAAA--CActct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342879 15 + 6628207 TGTGGAAACCACTCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323748 15 - 5917169 TGTGGAAACCACTCT i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13709813 15 + 13852661 TGTGGAAACCACTCT i otoGar3.GL873566 I 4 I 2007 s canFam3.chr5 80468926 15 + 88915250 TGTAGAAACTGCTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 927087 15 + 1009443 TGAGGAGACCGTTCT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e panTro5.chr16 21486138 0 - 81586097 C a score=9090.000000 s hg38.chr16_GL383557v1_alt 53351 1 + 89672 A s panPan2.chr16 21546981 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779346 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890880 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21364741 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21073128 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470394 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798564 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224405 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789122 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531372 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532156 1 - 44557958 a i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6342894 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323763 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80468941 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 927102 1 + 1009443 A i dasNov3.JH569970 C 0 I 196 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=-3255.000000 s hg38.chr16_GL383557v1_alt 53352 2 + 89672 Tt s panPan2.chr16 21546982 2 - 90481686 Tt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779347 2 + 3010529 Tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890881 2 + 163208435 Tt i nomLeu3.chr2 C 0 I 5 s rheMac8.chr20 21364742 2 - 74971481 GT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21073129 2 - 78541002 gt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470395 2 + 26466322 gt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798565 2 + 43916225 Tt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224406 2 + 75399963 Tt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789123 1 - 7209941 T- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531373 1 + 3907144 T- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21532157 2 - 44557958 tt i calJac3.chr20 C 0 M 1181 s saiBol1.JH378225 6342895 2 + 6628207 TT i saiBol1.JH378225 C 0 I 33 s cebCap1.NW_016107433v1 3323764 2 - 5917169 TT i cebCap1.NW_016107433v1 C 0 I 19 s canFam3.chr5 80468942 2 + 88915250 CT i canFam3.chr5 C 0 I 348 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e dasNov3.JH569970 927103 196 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=33171.000000 s hg38.chr16_GL383557v1_alt 53354 9 + 89672 gtgtgtgtg s panPan2.chr16 21546984 9 - 90481686 gtgtgtgtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779349 9 + 3010529 gtgtgtgtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890888 9 + 163208435 gtgtgtgtg i nomLeu3.chr2 I 5 I 1 s rheMac8.chr20 21364744 9 - 74971481 GTGTGTGTG i rheMac8.chr20 C 0 I 438 s macFas5.chr20 21073131 6 - 78541002 gtgtgt--- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470397 6 + 26466322 gtgtgt--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798567 9 + 43916225 gtgtgtgtg i cerAty1.NW_011999143v1 C 0 I 5 s chlSab2.chr5 58224408 9 + 75399963 gtgtgtgtg i chlSab2.chr5 C 0 I 3 s saiBol1.JH378225 6342930 9 + 6628207 gtgtgtgtg i saiBol1.JH378225 I 33 C 0 s cebCap1.NW_016107433v1 3323785 9 - 5917169 gtgtgtgtg i cebCap1.NW_016107433v1 I 19 I 1 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e dasNov3.JH569970 927103 196 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e colAng1.NW_012123265v1 531374 0 + 3907144 C e manLeu1.NW_012101698v1 6789124 0 - 7209941 C e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=30902.000000 s hg38.chr16_GL383557v1_alt 53363 9 + 89672 gtgtgtgtg s panPan2.chr16 21546993 5 - 90481686 ----gtgtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779358 1 + 3010529 --------g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890898 9 + 163208435 gtgtgtgtg i nomLeu3.chr2 I 1 C 0 s macFas5.chr20 21073137 9 - 78541002 gtgtgtgtg i macFas5.chr20 C 0 I 3975 s macNem1.NW_012011355v1 14470403 9 + 26466322 gtgtgtgtg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798581 9 + 43916225 gtgtgtgtg i cerAty1.NW_011999143v1 I 5 C 0 s chlSab2.chr5 58224420 9 + 75399963 gtgtgtgtg i chlSab2.chr5 I 3 C 0 s colAng1.NW_012123265v1 531374 8 + 3907144 -tgtgtgtg i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6342939 9 + 6628207 gtgtgtgtg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323795 9 - 5917169 gtgtgtgtg i cebCap1.NW_016107433v1 I 1 C 0 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e dasNov3.JH569970 927103 196 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e rheMac8.chr20 21364753 438 - 74971481 I e manLeu1.NW_012101698v1 6789124 0 - 7209941 C e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=478029.000000 s hg38.chr16_GL383557v1_alt 53372 103 + 89672 tgtgtg----------------tgtgtgtctgtgt--gtcagggtcttgctctgtt-ctcaggctggaatgcaatggtgtggtcccag----gtcactgcagcctcaacctcccaggctcaagcaa s panPan2.chr16 21546998 103 - 90481686 tgtgtg----------------tgtgtgtctgtgt--gtcagggtcttgctctgtt-ctcaggctggaatgcaatggtgtggtcccag----gtcactgcagcctcaacctcccaggctcaaacaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779359 103 + 3010529 tgtgtg----------------tgtgtgtctgtgt--gtcagggtcttgctctgtt-ctcaggctggaatgcaatggtgtggtcccag----gtcactgcagcctcaacctcccaggctcaagtaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53890907 119 + 163208435 tgtgtgtatgtgtctgtgtgtctgtgtgtctgtat--gtcagggtcttgctctgtt-ctcaggctggaatgcaatggtgtggtcccgg----gtcactgcagcctcaacctcccaggctcaagcaa i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012011355v1 14470412 103 + 26466322 tgtgtg----------------tgtgtgtgtgtgt--gtcagggtcttgctctgtt-ctcaggctagaatgcaatggtgtggtcccgg----gtcactgcagcctcaacctcccaggctcaagcaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798590 103 + 43916225 tgtgtg----------------tgtgtgtgtgtgt--gtcacggtcttgctctgtt-ctcaggctagaatgcaatggtgtggtcccgg----gtcactgcagcctcaacctcccaggctcaagcaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224429 103 + 75399963 tgtgtg----------------tgtgtgtgtgtgt--gtcagggtcttgctctgtt-ctcaggctagaatgcaatggtgtggtcccgg----gtcactgcagcctcaacctcccaggctcaagcaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789124 97 - 7209941 ----------------------TGTGTGTGTGTGT--GTcagggtcttgctctgtt-ctcaggctagaatgcaatggtgtggtcctgg----gtcactgcagcctcaacctcccaggctcaagcaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531382 103 + 3907144 tgtgag----------------tgtatgtgtgtgt--gtcagggtcttgccctgtt-ctcaggctggaatgcaatggtgtggtcccgg----gtcactgcagcctcaacctcccaggctcaagcaa i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6342948 108 + 6628207 tgtgtg----------------tgtgtgtgtgtgt--gtcagggtcttgctctgttgcccaggctggaatgcaatggtgtggtcccggggcaggcactgcagcctcaacctcccaggctcaagcaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323804 106 - 5917169 tgtgtg----------------tgtgtgtgtgtgtCAGTcagattcttgctctgttgcccaggctggaatgcaatggtgtggtcccgg----gtcactgcagcctcaacctcccaggctcaagcaa i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e dasNov3.JH569970 927103 196 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e rheMac8.chr20 21364753 438 - 74971481 I e macFas5.chr20 21073146 3975 - 78541002 I e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=20392.000000 s hg38.chr16_GL383557v1_alt 53475 4 + 89672 gtct s panPan2.chr16 21547101 4 - 90481686 gtct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779462 4 + 3010529 gtct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891026 4 + 163208435 gtct i nomLeu3.chr2 C 0 C 0 s macNem1.NW_012011355v1 14470515 4 + 26466322 gtct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798693 4 + 43916225 gtct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224532 4 + 75399963 gtct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789221 4 - 7209941 gtct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531485 4 + 3907144 atct i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6343056 4 + 6628207 gtct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323910 4 - 5917169 atct i cebCap1.NW_016107433v1 C 0 C 0 s dasNov3.JH569970 927299 4 + 1009443 ctct i dasNov3.JH569970 I 196 C 0 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e rheMac8.chr20 21364753 438 - 74971481 I e macFas5.chr20 21073146 3975 - 78541002 I e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=222625.000000 s hg38.chr16_GL383557v1_alt 53479 45 + 89672 cccacctc-agcctctcgagtagctaggaaacacaggcatgtgcca----------- s panPan2.chr16 21547105 45 - 90481686 cccacctc-agcctctcgagtagctaggaaacacaggcatgtgcca----------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779466 45 + 3010529 cccacctc-agcctctcgagtagctaggaaacacaggcatgtgcca----------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891030 45 + 163208435 cccacctc-agcctctcgagtagctaggaaacacaggcatgtgcca----------- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21077121 44 - 78541002 cccgtctc-ggcctcccaaagtgctggg-attacaggcttgagcca----------- i macFas5.chr20 I 3975 C 0 s macNem1.NW_012011355v1 14470519 45 + 26466322 cccacctc-agcctctcgagtagctgggaaacacaggcatgtgcca----------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798697 45 + 43916225 cccacctc-agcctctcgagtagctgggaaacacaggcatgtgcca----------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224536 45 + 75399963 cccacctc-agcctctcgagtagctgggaaatacaggcatgtgcca----------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789225 45 - 7209941 cccacctc-agcctctcgagtagctgggaaacacaggcatgtgcca----------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531489 45 + 3907144 cccacctg-agcctctcgaggagctgggaaacacaggcacatgcca----------- i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6343060 44 + 6628207 cccacctc-agcttcctgagtagctagg-accacaggcatgtgcca----------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323914 44 - 5917169 cccacctc-agcctcctgagtagctagg-accacaggcatgtgcca----------- i cebCap1.NW_016107433v1 C 0 C 0 s dasNov3.JH569970 927303 55 + 1009443 cttacttcaagcctttgcagtaagaag--agtccaggaatgtatcttctcctctccc i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e rheMac8.chr20 21364753 438 - 74971481 I e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=110928.000000 s hg38.chr16_GL383557v1_alt 53524 16 + 89672 ccacatctgg-ctaatt s panPan2.chr16 21547150 16 - 90481686 ccacatctgg-ctaatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779511 16 + 3010529 ccacatctgg-ctaatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891075 16 + 163208435 ccacgtctgg-ctaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365191 16 - 74971481 ccacatctgg-ctaatt i rheMac8.chr20 I 438 C 0 s macFas5.chr20 21077165 17 - 78541002 ccgcgcccggcctaatt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470564 16 + 26466322 ccacatctgg-ctaatt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798742 16 + 43916225 ccacatctgg-ctaatt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224581 16 + 75399963 ccacatctgg-ctaatt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789270 16 - 7209941 ccacatctgg-ctaatt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531534 16 + 3907144 ccacatctgg-ctaatt i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6343104 16 + 6628207 ccacacctgg-ctaatt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323958 16 - 5917169 ccacacctgg-ctaatt i cebCap1.NW_016107433v1 C 0 C 0 s dasNov3.JH569970 927358 16 + 1009443 tttcatcttg-ctaatt i dasNov3.JH569970 C 0 I 93 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=14196.000000 s hg38.chr16_GL383557v1_alt 53540 2 + 89672 tt s panPan2.chr16 21547166 2 - 90481686 tt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779527 2 + 3010529 tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891091 2 + 163208435 tt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365207 2 - 74971481 tt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077182 2 - 78541002 tt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470580 2 + 26466322 tt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798758 2 + 43916225 tt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224597 2 + 75399963 tt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789286 2 - 7209941 tt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531550 2 + 3907144 tt i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6343120 2 + 6628207 tt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323974 2 - 5917169 tt i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e dasNov3.JH569970 927374 93 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e calJac3.chr20 21532159 1181 - 44557958 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=933586.000000 s hg38.chr16_GL383557v1_alt 53542 124 + 89672 aaaaaaatgttttcgt----------------------------agagatggggtctcactgtgttgcccaggctggtctcaagttcaaggaatcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactgtacctgac s panPan2.chr16 21547168 124 - 90481686 aaaaaaatgttttcgt----------------------------agagatggggtctcactgtgttgcccaggctggtctcaagttcaaggaatcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactgtacctgac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779529 124 + 3010529 taaaaaatgttttcgt----------------------------agagatagggtctcactgtgttgcccaggctggtctcaagttcaaggaatcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactgtgcctgac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891093 124 + 163208435 ttaaaaatgttttcat----------------------------agagatggggtctcactgtattgcccaggctggtctcaagttcaaggaatcctcctgccttggtctcccaaagtgctggagttacaggcatgagccactgtgcccgac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365209 124 - 74971481 ttaaaaatgttttcgt----------------------------acagatggggtctcactgtgttgcccaggctggtctcaagttcaagcaatcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactatgcccgac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077184 149 - 78541002 tt---aattttttcgtagagatggggtctcactgtgttgcccagacagatggggtctcactgtgttgcccaggctggtctcaagttcaagcaatcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactatgcccgac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470582 124 + 26466322 ttaaaaatgttttcgt----------------------------acagatggggtctcactgtgttgcccaggctggtctcaagttcaagcaatcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactatgcccgac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798760 124 + 43916225 ttaaaaatgttttcgt----------------------------acagatggggtctcaatgtgttgcccaggctggtctcaagttcaagcaatcctcctgccttggtctcccaaagtgctggggttacaggcatgaggcactatgcccgac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224599 124 + 75399963 taaaaaatgttttcgt----------------------------acagatggggtctcactgtgttgcccaggctggtctcaagttcaagcaatcctcttgccttggtctcccaaagtgctggggttacaggcatgagccactatgcccgac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789288 124 - 7209941 ttaaaaatgttttcgt----------------------------acagatggggtctcactgtgttgcccaggctggtctcaagttcaagcagtcctcctgccttggtctcccaaagtgctggggttacaggcatgagccactatgcccgac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531552 124 + 3907144 taaaaaatgtttttgt----------------------------agagatggagtctcactgtgttgcccaggctggtctaaagttcaagcaatcctcctgccttggtctcccaaagtgctggggttacatgcatgagccactatgcccgac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21533385 124 - 44557958 AAAAAAAAGttttcat----------------------------agagatggggtttcactatgttgcccaggctggtctcaagctcaagcaatcctcctgccttggtctcccaaagtgctgtgattacaggcgtgagccactgtgcctgac i calJac3.chr20 M 1181 C 0 s saiBol1.JH378225 6343122 124 + 6628207 taaaaaatgttttcgc----------------------------agagatgaggtttcactatgttgcccaggctggtctcaagctcaagcaatcctgctgccttggtctcccaaagtgctgtgattacaggcatgagctactgtgcctgAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3323976 124 - 5917169 taaaaaatgttttcgt----------------------------agagatggggtttcactatgttgcccaggctggtctcaagctcaagcaatcctcctgccttggtctcccaaagtgctgtgattacaggcatgagccactgtgcctgac i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80468944 348 + 88915250 I e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e dasNov3.JH569970 927374 93 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=418738.000000 s hg38.chr16_GL383557v1_alt 53666 51 + 89672 cTCATGTAGCAtgactgatctacttgcttctctccccttctaggcggtata s panPan2.chr16 21547292 51 - 90481686 cTCATGTAGCAtgactgatctacttgcttctctccccttctaggtgttata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779653 51 + 3010529 cTCATGTAGCAtgactgatctacttgcttctctccccttctaggcggtata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891217 51 + 163208435 cTCACGTAGCAtgactgatctacttgcttctctccccagctaggcgttata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365333 51 - 74971481 cTCAtgtagcatcattgatctacttgcttctctctccagctaggcggtata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077333 51 - 78541002 cTCATGTAGCATCATTGAtctacttgcttctctctccagctaggcggtata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470706 51 + 26466322 cTCAtgtagcatcattgatctacttgcttctctctccagctaggcggtata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798884 51 + 43916225 cTCAtgtagcatcattgatctacttgcttctctctccagctaggtggtgta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224723 51 + 75399963 cTCAtgtagcatcattgatctacttgcttctctctccagctaggcggtgta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789412 51 - 7209941 cTCAtgtagcatcattgatctacttgcttctctctccagctaggtggtgta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531676 51 + 3907144 cTCATGTAGCATCACTGAtctacttgcttctctctccagctaggcggtgta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21533509 51 - 44557958 cTAATGAAGCatcgttaatttacttgcttttctccccatctaggctatata i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343246 51 + 6628207 CTAATGAAGCatcgttaatctacttgcttttctccccatctaggctatgta i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324100 51 - 5917169 cTAATGAAGCatcgttaatttacttgcttttctccccatctaggctatgta i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80469292 47 + 88915250 CTAATGCAGCATCAttgattta----cttttttccccaactaggctgtgag i canFam3.chr5 I 348 C 0 s dasNov3.JH569970 927467 51 + 1009443 ctaatgcagcatcactgatctacctatttctctcccaaattaagctgtgta i dasNov3.JH569970 I 93 C 0 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2943811 735 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=750274.000000 s hg38.chr16_GL383557v1_alt 53717 83 + 89672 gttcttgagggctgaggctgtatttttcttctgtttttggtgagttgcatatagtagccactcaataaatgta---tagctgt-tac s panPan2.chr16 21547343 83 - 90481686 gttcttgagggctgaggctgtatttttcttctgtttttggtgagttgcatatagtagccactcaataaatgtA---TAGCTGT-TAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779704 83 + 3010529 gttcttgagggctgaggctgtatttttcttctgtttttggtgagttgcatatagtagccactcaataaatgtA---TAACTGT-TAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891268 83 + 163208435 gttcttgagggctgaggccatatttttcctctgtttttggtgagttgcatatagtagcgactcaataaatgtG---TAACTGT-TAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365384 83 - 74971481 gttcttgagggctgaggccatatttctcttccgtttttggtgaggtgcatatagtagccactcaataaatgta---taactgt-tat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077384 83 - 78541002 gttcttgagggctgaggccatatttctcttccgtttttggtgagttgcatatagtagccactcaataaatgtA---TAACTGT-TAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470757 83 + 26466322 gttcttgagggctgaggccatatttctcttccgtttttggtgagttgcatatagtagccactcaataaatgtA---TAAGTGT-TAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20798935 83 + 43916225 gttcttgagggctgaggccgtatttctcttccgtttttggtgagttgcatatagtagccactcaataaatgta---taactgt-tat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224774 83 + 75399963 gttcttgagggctgaggccatatttctcttccgtttttggtgagttgcatatagtagccactcaataaatgtg---taactgt-tat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789463 83 - 7209941 gttcttgagggctgaggccatatttctcttccgtttttggtgagttgcatatagtagccactcaataaatgta---taactgt-tat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531727 83 + 3907144 gttcttgagggctgaggccacatttttcttccgtttttggtgagttgcatatagtaaccacttaataaatgtA---TAAATGT-TAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21533560 79 - 44557958 gttcttgagggttaagaccatatttct-----gtttttggtgagttgcatatagtaggcactcaataaatgtA---TAACTATGTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343297 79 + 6628207 gttcttgagggttgagatcatatttct-----gtttttggtgagttgcatatagtaggcactcaataaatgtA---TAACTGTGTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324151 79 - 5917169 gttcttgagggttgagaccacatttct-----gtttttggtgagttgcatatagtaggcactcaataaatgtA---TAACTGTGTAT i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2944546 83 + 9850184 gttcttgagggctgagagcatatctttcatctgttgttggtgcatagcatatagtaggcaatcaataaatgta---tgttaag-tAT i proCoq1.NW_012152729v1 I 735 C 0 s canFam3.chr5 80469339 77 + 88915250 gttcttgagagcggagatcatctttcacct--gttgttggcgcacagcatctagcagacagtaaatacatgt----tGAGTAT---- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 927518 87 + 1009443 gttcttgagggctgagatcatatctttcacgtgttcttggttggtggcatatagtaaacactcaataaatgtatgttaagtgagtAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54934629 978 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=1276527.000000 s hg38.chr16_GL383557v1_alt 53800 118 + 89672 tAAATTCTATAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAATATCTAGATctgtgctggtca-atatgaaggctattag-cacatgtagctatttaaattaaaattaaa s panPan2.chr16 21547426 118 - 90481686 TAAATTCTATAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAATAtctagatctgtgctggtca-atatgaaagctattag-cacatgtagctatttaaattaaaattaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779787 118 + 3010529 TAAATTCTATAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAACATCTAGATctgtgctggtca-atatgaaagctattag-cacatgtagctatttaaattaaaattaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891351 118 + 163208435 TAAATTCTATAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAATATCTAGATctgtgctgttca-atatgaaagccattag-cacatgtagctatttaaattaaaattaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365467 118 - 74971481 tAAATTCTGTAACTT-CCTAAAGACAATGAACTGACACAAAACTAAGCCTGAATAtctagatctgtgctgttca-atatgaaagccattag-cacgtgtagctatttaaattaaaattaaA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077467 118 - 78541002 TAAATTCTGTAACTT-CCTAAAGACAATGAACTGACACAAAACTAAGCCTGAATATCTAGATctgtgctgttca-atatgaaagccattag-cacgtgtagctatttaaattaaaattaaA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470840 118 + 26466322 TAAATTCTGTAACTT-CCTAAAGACAATGAACTGACACAAAACTAAGCCTGAATATCTAGATctgtgctgttca-acatgaaagccattag-cacgtgtagctatttaaattaaaattaaA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799018 118 + 43916225 tAAATTCTGTAACTT-CCTAAAGACAATGAACTGACACAAAGCGAAGCCTGAATATCTAGATctgtgctgttca-atatgaaagccattag-cacgtgtagctatttaaattaaaattaaA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224857 118 + 75399963 tAAATTCTGTAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAATATCTGGATctgtgctgttca-atatgaaagccattag-cacatgtagctatttaaattaaaattaaA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789546 118 - 7209941 tAAATTCTGTAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAATAtctagatctgtgctgttca-atatgaaagccattag-cacgtgtagctatttaaattaaaattaaA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531810 118 + 3907144 TAAATTCTATAACTT-CCTAAAGACAATGAACTGACACAAAGCTAAGCCTGAATATCTAGATctgcgctgttca-atacgaaagccattag-cacatgtagctatttaaattaaaattaaA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21533639 112 - 44557958 TAAATTCTATGACTT-CCTAAAAACAATGAACTGAGA-TAAGCTAAGCCTGAATATCTAGATCTATGCTGTTCA-ATATGAAAACTATTAG-CATATGTAGATAT-----TTAAAATGAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343376 107 + 6628207 TAAATTCTATGACTT-CCTAAAGACAATGAAC------TAAGCTAAGCCTGAATATCTAGATCTATGCTGTTCA-ATATGAAAAATATCAG-CACATGTAGCTAT-----TTAAAATGAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324230 112 - 5917169 TAAATTCTATGACTT-CCTAAAGACAATGAACTGAGA-TAAGCTAAGCCTGAATATCTAGATCTATGCTGTTCA-ATATGAAAAATATTAG-CACATGTAGCAAT-----TTAAAATGAAA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54935607 118 + 72247402 TAAATTCTATAACTT-CCTAAAGACTAAAGACTGGCACAAAGCTAAGCCTGAATATCTAGATctgtactgttca-atatgaaagccattag-tacatatgactatttaaaattaaataaaa i micMur3.chr20 I 978 C 0 s proCoq1.NW_012152729v1 2944629 118 + 9850184 TAAATTCTATAACTT-CCTAAAGACAAAAGACTGGCACAAAGCTAAGACCGAATATCTAGATctgtgccgttca-atatgaaagccattag-cacatgtgactatttaaaattaagtcaaa i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80469416 120 + 88915250 TAAGTCCTATAACTT-CCTGAAGACAAAGGACTGACACAAAGCTAAGCCTTACTATCTATATCTTTgttatccatatatgaaagtcactagccacatgcagctatttaaattaaaatcaaa i canFam3.chr5 C 0 I 168 s dasNov3.JH569970 927605 110 + 1009443 AAAGTACTGTAACTTACCTAAAGACAAAGG-CTGACACAGAGTTAAGCTTTAATATCTAGATTtgcaccatcct-acacagtagccactat-c--------ctatttaaattaaaattaaa i dasNov3.JH569970 C 0 I 178 e mm10.chr8 22472082 3626 - 129401213 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=66372.000000 s hg38.chr16_GL383557v1_alt 53918 7 + 89672 aattCTg s panPan2.chr16 21547544 7 - 90481686 aattCTg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779905 7 + 3010529 aattCTg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891469 7 + 163208435 aattCTg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365585 7 - 74971481 AATCCTg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077585 7 - 78541002 AATCCTg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470958 7 + 26466322 AATCCTg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799136 7 + 43916225 AATCCTg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224975 7 + 75399963 AATCCTg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789664 7 - 7209941 AATCCTg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531928 7 + 3907144 AATCCTg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21533751 7 - 44557958 AGTTCTg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343483 7 + 6628207 AGTTCTg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324342 7 - 5917169 AGTTCTg i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54935725 7 + 72247402 aattctg i micMur3.chr20 C 0 I 1013 s proCoq1.NW_012152729v1 2944747 7 + 9850184 aattctg i proCoq1.NW_012152729v1 C 0 I 831 e canFam3.chr5 80469536 168 + 88915250 I e mm10.chr8 22472082 3626 - 129401213 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=421291.000000 s hg38.chr16_GL383557v1_alt 53925 55 + 89672 gccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcagg s panPan2.chr16 21547551 55 - 90481686 gccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcagg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779912 55 + 3010529 gccaggcatggtggctcacacctgtaatcccaacactttgggaggctgaggcagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891476 55 + 163208435 gccaggcacggtggcttacacctgtaatcccagcacttcaggaggctgaggcagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365592 55 - 74971481 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077592 55 - 78541002 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14470965 55 + 26466322 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799143 55 + 43916225 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58224982 55 + 75399963 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789671 55 - 7209941 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 531935 55 + 3907144 gccaggcacggtggcttacacctgtaatcccagcactttgggaggctgaggcagg i colAng1.NW_012123265v1 C 0 M 675 s calJac3.chr20 21533758 55 - 44557958 gcctggcacagtggctgatgcctgtaattccagtactttgggaggccaaggcagg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343490 55 + 6628207 gcctggcacagaggctgatgcctgtaatcccaatactttgggaagctgaggcagg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324349 55 - 5917169 gcctggtacagtggttgatgcctgtaatcccagtactttggaaagccgaggcagg i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=428628.000000 s hg38.chr16_GL383557v1_alt 53980 63 + 89672 cagatcacctgaggttaggagtt-----ccagcctggccaacatggtgaaaccttgtctctataaaaa s panPan2.chr16 21547606 63 - 90481686 cagatcacctgaggttaggagtt-----ccagcctggccaacatggtgaaaccttgtctctacaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 779967 63 + 3010529 cagatcacctgaggttaggagtt-----ccagcctggccaacatggtgaaaccttgtctctacaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891531 63 + 163208435 caggtcacctgaggttaggagtt-----ccagcctggccaacatggtgaaaccttgtctctacaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365647 68 - 74971481 cggatcacctgaggttaggagttcgagaccagcctggccaacatggtgaaaccttgtctctacaaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077647 68 - 78541002 cggatcacctgaggttaggagttcgagaccagcctggccaacatggtgaaaccttgtctctacaaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471020 68 + 26466322 cggatcacctgaggttaggagttcgagaccagcctggccaacatggtgaaaccttgtctctacaaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799198 68 + 43916225 cggatcacctgaggttaggagttcgagaccagcctggccaacatggtgaaaccttgtctctataaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225037 68 + 75399963 cggatcacctgaggttaggagttcgagaccagcctggccaacatggtgaaaccttgtctctacaaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789726 68 - 7209941 cggatcacctgaggttaggagttcgagaccagcctggccaacatggtgaaaccttgtctctacaaaaa i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21533813 68 - 44557958 cagatcacctgagctcaggagttcaagaccagcctggccaacatggtgaaacctcatctccactaaaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343545 68 + 6628207 cacatcacctgaggtcaggagttcaagaccagcctggccaacgtggtgaaacctcatctctactaaaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324404 68 - 5917169 cagatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaacctcatctctactaaaa i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e colAng1.NW_012123265v1 531990 675 + 3907144 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=32769.000000 s hg38.chr16_GL383557v1_alt 54043 6 + 89672 atataa s panPan2.chr16 21547669 6 - 90481686 atataa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780030 6 + 3010529 atataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891594 6 + 163208435 atataa i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21077715 6 - 78541002 atataa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471088 6 + 26466322 atataa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799266 6 + 43916225 atataa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225105 6 + 75399963 atataa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789794 6 - 7209941 atataa i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21533881 6 - 44557958 atacaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6343613 6 + 6628207 atacaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3324472 6 - 5917169 atacaa i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e rheMac8.chr20 21365715 0 - 74971481 C e colAng1.NW_012123265v1 531990 675 + 3907144 M e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=8823.000000 s hg38.chr16_GL383557v1_alt 54049 5 + 89672 aaatt s panPan2.chr16 21547675 5 - 90481686 aaatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780036 5 + 3010529 aaatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891600 5 + 163208435 aaatt i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21533887 5 - 44557958 aaatt i calJac3.chr20 C 0 I 1275 s saiBol1.JH378225 6343619 5 + 6628207 aagtt i saiBol1.JH378225 C 0 I 3449 s cebCap1.NW_016107433v1 3324478 5 - 5917169 aaatt i cebCap1.NW_016107433v1 C 0 I 4988 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e macNem1.NW_012011355v1 14471094 0 + 26466322 C e rheMac8.chr20 21365715 0 - 74971481 C e macFas5.chr20 21077721 0 - 78541002 C e colAng1.NW_012123265v1 531990 675 + 3907144 M e manLeu1.NW_012101698v1 6789800 0 - 7209941 C e chlSab2.chr5 58225111 0 + 75399963 C e cerAty1.NW_011999143v1 20799272 0 + 43916225 C e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=142838.000000 s hg38.chr16_GL383557v1_alt 54054 269 + 89672 gtgctcgcttcagcagcacatatactaaaattggaacgatacagagaagattaacgtggcccctgagcaaggatgacacgcaaattcgtgaagcgttccatatttttTGCAAACCATCCAAAAGACCACCACCCGCCAGACAGTGGATGGCAAAGTGGTGTCTGAGACCAACGACACCAAAGTTCTGAGGCATTAAGCCAGCAGAAGCAGGGTACCCTTTGAGGAGCAGGAGGCCAATAAAAAGTTCAGAGTTAAAAAAat-------------atatatat s panPan2.chr16 21547680 269 - 90481686 gtgctcgcttcagcagcacatatactaaaattggaacgatacagagaagattaacgtggcccctgagcaaggatgacacgcaaattcgtgaagcgttccatatttttTGCAAACCATCCAAAAGACCACCACCCGCCGGACAGTGGATGACAAAGTGGTGTCTGAGACCAACGACACCAAAGTTCTGAGGCATTAAGCCAGCAGAAGCAGGGTACCCTTTGAGGAGCAGGAGGCCAATAAAAAGTTCAGAGTTAAAAAAAA-------------atatatat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780041 261 + 3010529 gtgctcacttcagcagcacatatactaaaattggaacgatacagagaagattaacgtggcccctgagcaaggatgacacgcaaattcgtgaagcgttccatatttttTGCAAACCATCCAAAAGACCACCACCCGCCGGACAGTGGATGGCAAAGTGGTGTCTGAGACCAACGACACCAAAGTTCTGAGGCATTAAGCCAGCAGAAGCAGGGTACCCTTTGAGGAGCAGGAGGCCAATAAAAAGTTCAGAGTTAAAAAAAa--------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891605 282 + 163208435 gtgctcacttcggcagcacatatactaaaatcggaacgatacagagaagattagcatggcccctgagcaaggatgacacgcaaattcgtgaagcgttccatatttttTGCAAACCATCCAAAAGACCACCACCCGCCGGACAGTGGATGGCAAAGTGGTGTCTGAGACCAACGACACCAAAGTTCTGAGGCACTAAGCCAGCAGAAGCAGGGTACCCTTTGGGGAGCAGGAGGCCAATAAAAAGTTCAGAGTTGaaaaaaaaaaaaaaaaaaaaaTATATAT i nomLeu3.chr2 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e macNem1.NW_012011355v1 14471094 0 + 26466322 C e rheMac8.chr20 21365715 0 - 74971481 C e macFas5.chr20 21077721 0 - 78541002 C e colAng1.NW_012123265v1 531990 675 + 3907144 M e manLeu1.NW_012101698v1 6789800 0 - 7209941 C e chlSab2.chr5 58225111 0 + 75399963 C e cerAty1.NW_011999143v1 20799272 0 + 43916225 C e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=11491.000000 s hg38.chr16_GL383557v1_alt 54323 119 + 89672 gtgtatatatatatacacatacacacacacacacacatatatattatatatatgtgtgtatatatatgtgtgtgtgtgtatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatac s panPan2.chr16 21547949 107 - 90481686 gtgtatatatatatac----acacacacacacacacatatatattatatatatgtgtgtatata--------tgtgtgtatatatatgtgtgtgtgtgtgtgtgtgcgtgtgtatatat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780302 51 + 3010529 ---tatatatatatat----acacacacacacacacatatata-----------------------------tgtatgtgtatatat-------------------------------- i gorGor5.CYUI01000018v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e macNem1.NW_012011355v1 14471094 0 + 26466322 C e rheMac8.chr20 21365715 0 - 74971481 C e macFas5.chr20 21077721 0 - 78541002 C e colAng1.NW_012123265v1 531990 675 + 3907144 M e manLeu1.NW_012101698v1 6789800 0 - 7209941 C e chlSab2.chr5 58225111 0 + 75399963 C e cerAty1.NW_011999143v1 20799272 0 + 43916225 C e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I e nomLeu3.chr2 53891887 0 + 163208435 C e panTro5.chr16 21486138 0 - 81586097 C a score=1036.000000 s hg38.chr16_GL383557v1_alt 54442 8 + 89672 atat------------atat s panPan2.chr16 21548056 20 - 90481686 atatatatatatgtacatat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780353 4 + 3010529 ----------------atat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891887 8 + 163208435 ATAT------------ATAT i nomLeu3.chr2 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e macNem1.NW_012011355v1 14471094 0 + 26466322 C e rheMac8.chr20 21365715 0 - 74971481 C e macFas5.chr20 21077721 0 - 78541002 C e colAng1.NW_012123265v1 531990 675 + 3907144 M e manLeu1.NW_012101698v1 6789800 0 - 7209941 C e chlSab2.chr5 58225111 0 + 75399963 C e cerAty1.NW_011999143v1 20799272 0 + 43916225 C e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=4604.000000 s hg38.chr16_GL383557v1_alt 54450 6 + 89672 atatat s panPan2.chr16 21548076 6 - 90481686 atatat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780357 6 + 3010529 atatat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891895 6 + 163208435 atatat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365715 6 - 74971481 atataa i rheMac8.chr20 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e macNem1.NW_012011355v1 14471094 0 + 26466322 C e macFas5.chr20 21077721 0 - 78541002 C e colAng1.NW_012123265v1 531990 675 + 3907144 M e manLeu1.NW_012101698v1 6789800 0 - 7209941 C e chlSab2.chr5 58225111 0 + 75399963 C e cerAty1.NW_011999143v1 20799272 0 + 43916225 C e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=584933.000000 s hg38.chr16_GL383557v1_alt 54456 154 + 89672 aaattagccgggcatggtggcgcatgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagatggtgccactgcgctccagcctgggcgacagagtgagactccgtctcaa s panPan2.chr16 21548082 154 - 90481686 aaattagccgggcatggtggcgcatgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagatggtgccactgcactccagcctaggcgacagagtgagactccatctcaa i panPan2.chr16 C 0 M 174 s gorGor5.CYUI01000018v1 780363 154 + 3010529 aaattagccgggcatggtggcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaagccaggaggtggaggttgcagtgagccaagatggtgccactgcactccagcctgggcgacagagtgagactccgtctcaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53891901 154 + 163208435 aaattagccgggcgtggtggcgcacgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaagagggtgacactgcactccagcctgggcgacagagtgaggctctgtctcaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365721 147 - 74971481 aaattagccaggcgtagtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatc-------ctcagaaggtggaggctgcagtgagccaagatggtgccactgcactccagcctgggtgacagagtgagactctgtctcaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077721 147 - 78541002 aaattagccaggcgtagtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatc-------ctcagaaggtggaggctgcagtgagccaagatggtgccactgcactccagcctgggtgacagagtgagactctgtctcaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471094 147 + 26466322 aaattagccaggcatagtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatc-------ctcagaaggtggaggctgcagtgagccaagatggtgccactgcactccagcctgggtgacagagtgagactctgtctcaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799272 147 + 43916225 aaattagccaggcgtggtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatc-------ctcagaaggtggaggctgcagtgagccaagatggtgccactgcactccagcctgggtgacagagtgagactccgtctcaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225111 147 + 75399963 aaattagctgggcgtggtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatc-------ctcagaaggtggaggttgcagtgagccaagatggtgccactgcactccagcctgggtgacagagtgagactccgtctcaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789800 147 - 7209941 aaattagccaggcgtggtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatc-------ctcagaaggtggaggctgcagtgagccaagatggtgccactgcactccagcctgggtgacagagtgagactccgtctcaa i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e colAng1.NW_012123265v1 531990 675 + 3907144 M e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=14088.000000 s hg38.chr16_GL383557v1_alt 54610 12 + 89672 aaaataaataaa s gorGor5.CYUI01000018v1 780517 12 + 3010529 aaaataaataaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892055 12 + 163208435 aaaataaataaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365868 8 - 74971481 aatataaa---- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077868 8 - 78541002 aatataaa---- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471241 8 + 26466322 aatataaa---- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799419 8 + 43916225 aatataaa---- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225258 8 + 75399963 aatataaa---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789947 8 - 7209941 aatataaa---- i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e panPan2.chr16 21548236 174 - 90481686 M e colAng1.NW_012123265v1 531990 675 + 3907144 M e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I e panTro5.chr16 21486138 0 - 81586097 C a score=653027.000000 s hg38.chr16_GL383557v1_alt 54622 178 + 89672 taaataaaacagaaatgttttctatttgtgctatgccgtaagatagttactaggcacatgtgactattgagcacttgcaatgttgctagtgtgactaagaacagaa-------------ttttttttttttgagaaggagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcggctcactg s panTro5.chr16 21486138 178 - 81586097 taaataaaaCAgaaatgttttctatttgtgctatgccgtaagatagttactaggcacatgtgactattgagcacttgcaatgttgctagtgtgactaagaacagaa-------------ttttttttttttgagacggagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcggctcactg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780529 178 + 3010529 taaataaaacagaaatgttttctatttgtgctatgccgtaagatagttactaggcacatgtgactactgagcacttgcaatgttgctagtgtgactaagaacagaa-------------ttttttttttttgagacggagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcggctcactg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892067 171 + 163208435 --------acagaaatgttttctatttgtgctatgccgtaagatagttaccaggcacatgcgactactgagcacttgcaatgttgctagtgtgactaagaacagaa------------tttttttttttttgagacggagtcttgctccgttacccaggcaggagtgcagtggtgcgatttcggctcactg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21365876 183 - 74971481 taaataaaatagaaatgttttctatttgtgctatgctgtaagatagttagtaggcacatgtgactactgagcacttgcaatgttgctagtgtgactaagaaCATAA--------tttttttttttttttttgagacagagtcttgctctgttacccaggcagtagtgcagtggtgcgatttcagctcactg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21077876 181 - 78541002 taaataaaatagaaatgttttctatttgtgctatgttgtaagatagttagtaggcacatgcgactactgagcacttgcaatgttgctagtgtgactaagaaCATAA----------tttttttttttttttgagacagagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcagctcactg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471249 181 + 26466322 taaataaaatagaaatgttttctatttgtgctatgctgtaagatagttagtaggcacatgtgactactgagcacttgcaatgttgctagtgtgactaagaaCATAA----------tttttttttttttttgagacagagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcagctcactg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799427 191 + 43916225 taaataaaatagaaatgttttctatttgtgctatgctgtaagatagttagtaggcacatgtgactactgagcacttgcaatgttgctagtgtgactaagaaCATAAttttttttttttttttttttttttttGGGGGGGGTTTTTTTTTTGCCCCCCTgctggtgtgcaatagcgtgatctcggcacactg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225266 174 + 75399963 taaataaaatagaaatgttttctatttgtgctatgttgtaaga----tagtaggcacatgtgactactgagcacttgcaatgttgctagtgtgactaagaaCATAA-------------ttttttttttttgagacagagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcagctcactg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6789955 184 - 7209941 taaataaaatagaaatgttttctatttgtgctatgctgtaagatagttagtaggcacatgtgactactgagcacttgcaatgttgctagtgtgactaagaaCATAA-------ttttttttttttttttttgagatagagtcttgctctgttacccaggcaggagtgcagtggtgcgatttcagctcactg i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e panPan2.chr16 21548236 174 - 90481686 M e colAng1.NW_012123265v1 531990 675 + 3907144 M e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I a score=117710.000000 s hg38.chr16_GL383557v1_alt 54800 23 + 89672 caacctctgcctcccaggttcaa s panTro5.chr16 21486316 23 - 81586097 caacctctgcctcccaggttcaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780707 23 + 3010529 caacctctgcctcccaggttcaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892238 23 + 163208435 caacctctgcctcccaggttcaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21366059 23 - 74971481 caacctctgcctcccaggttcaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078057 23 - 78541002 caacctctgcctcccaggttcaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471430 23 + 26466322 caacctctgcctcccaggttcaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799618 23 + 43916225 caacctccacctcccaggttcaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225440 23 + 75399963 caacctctgcctcctaggttcaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790139 23 - 7209941 caacctctgcctcccaggttcaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 532665 23 + 3907144 caacctctgcctcccaggttcaa i colAng1.NW_012123265v1 M 675 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e panPan2.chr16 21548236 174 - 90481686 M e saiBol1.JH378225 6343624 3449 + 6628207 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I a score=440171.000000 s hg38.chr16_GL383557v1_alt 54823 82 + 89672 gcgattctcctgcttcagcctcctgagtagctgggattacaggcacacaccaccatgcctgg---ctaatttttgtatttttagt s panTro5.chr16 21486339 82 - 81586097 gcaattctcctgcttcagcctcctgagtagctgggattacaggcacacaccaccatgcctgg---ctaatttttgtatttttagt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 780730 82 + 3010529 gcgattctcctgcttcagcctcctgagtagctgggattacaggcgcacaccaccatgcctgg---ctaatttttgtatttttagt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892261 82 + 163208435 gcgattctcctgcttcaacctcctgagtagctgggattacaggcacacgccaccatgcctgg---ctaatttttgtatttttagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21366082 82 - 74971481 gcgattctcctgcctcagtctcctgagtagctgggattacaggcacatgccaccatgcctgg---ctaatttttgtacttttagt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078080 82 - 78541002 gcgattctcctgcctcagtctcctgagtagctgggattacaggcacatgccaccatgcctgg---ctaatttttgtacttttagt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471453 82 + 26466322 gcgattctcctgcctcagtctcctgagtagctgggattacaggcacatgccaccatgcctgg---ctaatttttgtacttttagt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799641 82 + 43916225 gcgattctcctgcctcagcctcctgagtagctgggattacaggcacatgccaccatgcctgg---ctaatttttgtacttttagt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225463 82 + 75399963 gcgattctcctgcctcagcctcctgagtagctgggattacaggcacacgccaccatgcctgg---ctaatttttgtacttttagt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790162 82 - 7209941 gcgattctcctgcctcagcctcctgagtagctgggattacaggcacatgccaccatgcctgg---ctaatttttgtacttttagt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 532688 82 + 3907144 gcgattctcctgcctcagcctcctgagtagctgggattacacgcacatgccaccatgcctgg---ctaatttttgtacttttagt i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6347073 82 + 6628207 gtgatccacccgtctcagcctcccaaagtgctgggattacaggtgtgagccaccgcgcccagccTCTAttttatttactttt--- i saiBol1.JH378225 I 3449 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e panPan2.chr16 21548236 174 - 90481686 M e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I a score=2737890.000000 s hg38.chr16_GL383557v1_alt 54905 430 + 89672 agaggcagagtttcaccaagttggtcaggctgg---------------tctt---------caactcctgacctcgtgatccgcccacctcagcctcccaaggcac-tgggattacaggcatgagccacc----------------------------------------------------TTATgctggcttcgaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattacacgcgtggaccaaccgtgcccagccTTACTTAtttatttttgatacaggggtctcactctgtc-acccaggttggagtgcagtggcatgatc-tctgctcactacaacttccacctcccaggctcaagtaattctcccacctcagcctcccaagtagctgagattataggcatgcgccactacacccagctaatttttgtatttttagtagagacggggtttcatggtgcctaggctggtctcaaactcctgagctcagg s panTro5.chr16 21486421 429 - 81586097 agaggcagagtttcaccaagttggtcaggctgg---------------tctt---------caactcctgacctcgtgatccgcccacctcagcctcccaaggcac-tgggattacaggcatgagccacc----------------------------------------------------TTATgctggcttcgaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattacacgcgtgaacca-ccgtgcccagccTTACTTAtttatttttgatacaggggtctcactctgtc-acccaggttggagtgcagtggcatgatc-tctgctcactacaacttccacctcccaggctcaagcaattctcccacctcagcctcccaagtagctgagattataggcatgcgccactacacccagctaatttttgtatttttagtagagacggggtttcatggtaactaggctggtctcaaactcctgagctcagg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21548410 429 - 90481686 agaggcagggtttcaccaagttggtcaggctgg---------------tctt---------caactcctgacctcgtgatccgcccacctcagcctcccaaggcac-tgggattacaggcatgagccacc----------------------------------------------------TTATgctggcttcgaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattacacgcgtgaacca-ccgtgcccagccTTACTTAtttatttttgatacaggggtctcactctgtc-acccaggttggagtgcagtggcatgatc-tctgctcactacaacttccacctcccaggctcaagcaattctcccacctcagcctcccaagtagctgagattataggcatgcgccactacacccagctaatttttgtatttttagtagagacggggtttcatggtgcctaggctggtctcaaactcctgagctcagg i panPan2.chr16 M 174 C 0 s gorGor5.CYUI01000018v1 780812 429 + 3010529 agaggcagagtttcaccaagttggtcaggctgg---------------tctt---------caactcctgacctcgtgatccgcccacctcagcct-ccaaggcacttgggattacaggcatgagtcacc----------------------------------------------------TTATgctggcttcgaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattacaggtgtgagcca-ccgtgcccagccTTACTTAtttatttttgatacaggggtctcactctgtc-acccaggttggagtgcagtggcatgatc-tctgctcactacaacttccacctcccaggctcaagcaattctcccacctcagcctcccaagtagctgagattataggcatgcgccactacacccagctaatttttgtatttttagtagagacggggtttcatggtgcccaggctggtctcaaactcctgagctcagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892343 429 + 163208435 agaggcggagtttcgccacgttggtcaggctgg---------------tctt---------caactcctgacctcatgatccgcccacctcagcctcccaaggtgc-tgggattacaggcatgagccacc----------------------------------------------------Tcatgctggcttcaaactcctgacctcatgatccacccgcctcggcctccccaaatgctgggattacagacatgagcca-ccgtgcccagccTTACTTAtttatttttgagacggtggtctcactctgtc-acccaggttggagtgcagtggcgtgatc-tctgctcattgcaacttccacctcccaggctcaagcaattctcccacctcagcctaccaagtagctgagattataggcatgcgccactacatccagctaatttttgtatgttttgtagagacggggtttcatggtgcctaggctggtctcaaactcctgagctcagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21366164 430 - 74971481 agaggcgaagtttcaccatgttagtcaggctgg---------------tctt---------caactcttgacctcgtgatctgcccacctcagcctcccaaggtgc-tgggattacagccatgagccacc----------------------------------------------------Tcatgctggtttcaaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattaccggcgtgagcca-ccgtgcccagccTTAtttatttatttttgagacgggggtctcactctgtc-acccaggttggagtgcaggggcgtgattatctgttcactgcaacctctacctcccaggctcaagcagttctcccacctcagcctcccaagtagctgagattatatgcacacgccactacacccagctcatttttgaatttttagtagagacggggtttcacgctccctaggctggtctcaaactcctgagctcaga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078162 430 - 78541002 agaggcgaagtttcaccatgttagtcaggctgg---------------tctt---------caactcctgacctcgtgatctgcccacctcagcctcccaaggtgc-tgggattacagccatgagccacc----------------------------------------------------Tcatgctggtttcaaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattaccggcgtgagcca-ccgtgcccagccTTAtttatttatttttgagacgggggtctcactctgtc-acccaggttggagtgcaggggcgtgattatctgttcactgcaacctctacctcccaggctcaagcagttctcccacctcagcctcccaagtagctgagattatatgcacacgccactacacccagctcatttttgaatttttagtagagacggggtttcacgctccctaggctggtctcaaactcctgagctcaga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471535 430 + 26466322 agaggcgaagtttcaccatgttagtcaggctgg---------------tctt---------caactcctgacctcgtgatctgcccacctcagcctcccaaggtgc-tgggattacagccatgagccacc----------------------------------------------------Tcatgctggcttcaaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattaccggcgtgagcca-ccgtgcccagccTTAtttatttatttttgagacgagggtctcactctgtc-acccaggttggagtgcaggggcgtgattatctgttcactgcaacctctacctcccaggctcaagcagttctcccacctcagcctcccaagtagctgagattatatgcacacgccactacacccagatcatttttgaatttttagtagagacggggtttcacgctccctaggctggtctcaaactcctgagctcaga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20799723 430 + 43916225 agaggcgaagtttcaccatgttagtcaggctgg---------------tctt---------caactcctgacttcgtgatctgcccacctcagcctcccaaggtgc-tgggattacaggcatgagccacc----------------------------------------------------Tcatgctggcttcaaactcctgacctcatgatccacctgcctcggcctcccaaaatgctgggattacaggcgtgagcca-ccgtacccagccTTAtttatttatttttgagacgggggtctcactctgtc-acccaggttggagtgcaggggcgtgattatctgttcactgcaacctctacctcccaggctcaagcagttctcccacctcagcctcccaagtagctgagattatatgcacacgccactacacccagctcatttttgaatttttagtagagacggggtttcatgctgcttaggctggtctcaaactcctgagctcaga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225545 430 + 75399963 agaggcgaagtttcaccatgttagtcaggctgg---------------tctt---------caactcctgacctcgtgatctgcccacctcagcctcccaaggtgc-tgggattacaggcatgagccacc----------------------------------------------------Tcatgctggcttcaaactcctgacctcatgatccacccgcctcggcctcccaaaatgctgggattacaggcgtgagcca-ccatgcccagccTTAtttatttatttttgagacgggggtctcactctgtc-acccaggttggagggcaggggcgtgattatctgttcactgcaacctctacctcccaggctcaagcagttctcctacctcagcctcccaagtagctgagattatatgcacacgccactacacccagctcatttttgaatttttagtagagatggggtttcacgctgcctaggctggtctcaaactcctgagctcaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790244 430 - 7209941 agaggccaagtttcaccatgttagtcaggctgg---------------tctt---------caactcctgacttcgtgatctgcccacctcagcctcccaaggtgc-tgggattacaggcatgagccacc----------------------------------------------------Tcatgctggcttcaaactcctgacctcatgatccaccctcctcggcctcccaaaatgctgggattacaggcgtgagcca-ccgtacccagccTTAtttatttatttttgagacgggggtctcactctgtc-acccaggttggagtgcaggggcgtgattatctgttcactgcaacctctacctcccaggctcaagtagttctcccacctcagcctcccaagtagctgagattatatgcacacgccactacacccagctcatttttgaatttttagtagagacggggtttcacgctgcctaggctggtctcaaactcctgagctcaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 532770 430 + 3907144 agaggcaaagtttcaccatgttagtcaggctgg---------------tctt---------caactcctgacctcgtgatctgcctacctcagcctcccaaggtgc-tgggattacaggcatgagccacc----------------------------------------------------Tcatgctggcttcaaactcctgacctcatgatccacccgcctcagcctcccaaaatgctgggattacaggcgtgagcca-ccgtgcccagccTTAtttatttatttttgagacgggggtctcagtctgtc-acccaggttggagtgcaggggtgtgattatctgctcactgcaacctccacctcccaggctcaagcagttctcccacctcagcctcccaagtagctgagattatatgcacatgccactacagccagctcatgtttgaatttttagtagagacggggtttcacgctgcctaggctggtctcaaactcctgagctcagg i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6347155 504 + 6628207 -gagacagagtattgccccgttgcccaggttggagtgcaatggcatgatcttggctcactgcaacctctg-cctcccaattctcctgcctcagcctcctgagtagc-tgagattacaggtgtgcaccaccatgttcagctaatttttgtatttttagtagaaacagggttttaccatgttggccaggctggcctcgaactcctgaccttgtgatctgcccacctcagcctcccaaaatgctgggattataggcgtgagtca-ccgtgcccaaccTCAtttatttatttctgagatgggggtctcactctgtctacccaggttggagtacagtagttcgatc-tctgctcattgcaatctccacctcccaggttcaagcaattctcccaccacagcctcccaagtagctgagattacaggcatgtaccaccacacccagccaatttttgtatttttagtaaagatggagtttcatgctgcctaggttggtcttgaactcctgagctcatg i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e calJac3.chr20 21533892 1275 - 44557958 I e otoGar3.GL873566 13709828 2007 + 13852661 I a score=616935.000000 s hg38.chr16_GL383557v1_alt 55335 84 + 89672 tgattcatccggcttggcctcccaaagtgctgtgattacaggcatga----gccacc-acacttggccTacttttctatcattacggaa s panTro5.chr16 21486850 84 - 81586097 tgattcatccggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-acgcttggccTacttttctatcatcacagaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21548839 84 - 90481686 tgattcatccggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-acgcttggccTacttttctatcatcacagaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781241 84 + 3010529 tgattcatccggcttggtctcccaaagtgctgcgattacaagcatga----gccacc-acgcttggccTacttttctatcatcacagaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892772 72 + 163208435 tgattcatctggcttg------------gctgcgattacaggcatga----gccacc-atgcttggccTACTTTTCTATCATCACAGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21366594 84 - 74971481 tgattcatctggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-atgcctggccTacttttctatcatcacagaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078592 84 - 78541002 tgattcatctggcttggcctccgaaagtgctgcgattacaggcatga----gccacc-atgcctggcccacttttctatcatcacagaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14471965 84 + 26466322 tgattcatctggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-atgcctggccTacttttctatcatcacagaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800153 84 + 43916225 tgattcatctggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-atgcctggccTACTTTTCTATCATCACAGAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58225975 84 + 75399963 tgattcatctggcttggcctcccaaagtgctgagattacaggcataa----gccacc-atgcctggccTACTTTTCTATCATCACAGAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790674 84 - 7209941 tgattcatctggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-atgcctggccTACTTTTCTATCATCACAGAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533200 84 + 3907144 tgattcatctggcttggcctcccaaagtgctgcgattacaggcatga----gccacc-atgcctggccTACTTTTCTATCGTCACAGAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535167 89 - 44557958 tgattcatccagcttggcctctgcaagtgctggaattacaggcgtgacgacactacacacacctggccTacttttctatcatcacagaa i calJac3.chr20 I 1275 C 0 s saiBol1.JH378225 6347659 84 + 6628207 tgattcatccagcttggcctctgcaaatgctgggattacaggtgtga----gccaca-acacctggcctacttttctatcatcacagaa i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e otoGar3.GL873566 13709828 2007 + 13852661 I a score=391557.000000 s hg38.chr16_GL383557v1_alt 55419 46 + 89672 agtttattggacagtgctgATCTACGTCATAAAATACCTTGAAATA s panTro5.chr16 21486934 46 - 81586097 agtttattggacagtgctgATCTACGTCATAAAATACCTTGAAATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21548923 46 - 90481686 agtttattggacagtgctgATCTACGTCATAAAATACCTTGAAATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781325 46 + 3010529 agtttattggacagtgctgATCTACGTCataaaataccttgaaata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892844 46 + 163208435 GGTTCATTGGACCGTGCTGATCTACATCATAAAATACCTTGAAATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21366678 46 - 74971481 agtttattcgacagtgctgATCTACATCataaaataccttgaaata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078676 46 - 78541002 agtttatttgacagtgctgATCTACATCataaaataccttgaaata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472049 46 + 26466322 agtttattcgacagtgctgATCTACATCataaaataccttgaaata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800237 46 + 43916225 AGTTTATTCGACAGTGCTCATCTACATCataaaataccttgaaata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226059 46 + 75399963 AGTTTATTCGACAGTGCTAATCTACATCataaaataccttgaaata i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790758 42 - 7209941 AG----TTCGACAGTGCTGATCTACATCataaaataccttgaaata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533284 46 + 3907144 AGTTTATTCAACAGTGCTGATCTACATCATAAAATAtcttgaaata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535256 46 - 44557958 agtttattggacagtgctgATCTACATCATAATATACCTTGAAATA i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6347743 46 + 6628207 agtttattggacagtgctgATCTACATCATAATATACCTTGAAATA i saiBol1.JH378225 C 0 I 2 s otoGar3.GL873566 13711835 46 + 13852661 AGTTCCTTTGGCAGTGCTGATCTATATCATAAAATACCTTGAAATG i otoGar3.GL873566 I 2007 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I a score=89382.000000 s hg38.chr16_GL383557v1_alt 55465 14 + 89672 CTAAAAGAAAAAGA s panTro5.chr16 21486980 14 - 81586097 CTAAAAGAAAAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21548969 14 - 90481686 CTAAAAGAAAAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781371 14 + 3010529 ctaaaagaaaaaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892890 14 + 163208435 CTAAAAGAAAAAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21366724 14 - 74971481 ctaaaagaaaaaga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078722 14 - 78541002 ctaaaagaaaaaga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472095 14 + 26466322 ctaaaagaaaaaga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800283 14 + 43916225 ctaaaagaaaaaga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226105 14 + 75399963 ctaaaagaaaaaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790800 14 - 7209941 ctaaaagaaaaaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533330 14 + 3907144 ctaaaagaaaaaga i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13711881 14 + 13852661 TGAAATGGACAAAA i otoGar3.GL873566 C 0 I 351 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e saiBol1.JH378225 6347789 2 + 6628207 I e calJac3.chr20 21535302 2 - 44557958 I a score=1211874.000000 s hg38.chr16_GL383557v1_alt 55479 226 + 89672 CAACACggctggacacggtggctcacgcctgtaatcccagcacttcgggaggccgagctgggcggatcacgaagtcaggagctcgacaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcatggtggcaggcgcctgtagtcccagctactcaggaggctgaggcaggagaatgccttgaacccgggaggcggagctg s panTro5.chr16 21486994 226 - 81586097 CAACACggctgggcacggtggctcacgcttgtaatcccagcacttcgggaggccgaggtgggcggatcacgaagtcaggagctcgacaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcatggtggcaggcgcctgtagtcccggctactcaggaggctgaggcaggagaatgccttgaacccgggaggcggagctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21548983 226 - 90481686 CAACACggctgggcacggtggctcacgcttgtaatcccagcacttcgggaggccgaggtgggcggatcacgaaatcaggagctcgacaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcatggtggcaggcgcctgtagtcccggctactcaggaggctgaggcaggagaatgccttgaacccgggaggcggagctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781385 226 + 3010529 caacacggctgggcacggtggttcacgcctgtaatcccagcacttcgggaggccaaggtgggcggatcacgaagtcaggagctcgacaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcatggtggcaggcgtctgtagtcccagctactcaggaggctgaggcaggagaatgccttgaacccgggaggcggagctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53892904 222 + 163208435 CAACGTggctgggcacggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcggatcacgaagtcaga---tcgacaccattctggctaacacagcaaaaccccatctctactaaaaatacaaaaaattagccgggcgtggtggcgggcacctgta-tcccagctactcaggaggctgaggcaggtgaatgccttgaacccgggaggcggagctG i nomLeu3.chr2 C 0 M 327 s rheMac8.chr20 21366738 225 - 74971481 caacacggccgggcgcggtggctcaggcctgtaatcccaatactttgggaggccgaggtgggcagatcacaaggtcaggagatcgaaacctacctggctaacacggtgaaaccccgtctctactaaaaacacaaaaaattagctgggcgtggtgtcaggtgtctgtagtcccagctactggggaggctgaggcaggagaatgccgtgaacctgggaggc-gagctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078736 225 - 78541002 caacacggccgggcgcggtggctcaggcctgtaatcccaatactttgggaggccgaggtgggcagatcacaaggtcaggagatcgaaacctacctggctaacacggtgaaaccccgtctctactaaaaacacaaaaaattagctgggcgtggtgtcaggtgcctatagtcccagctactggggaggctgaggcaggagaatgccgtgaacctgggaggc-gagctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472109 225 + 26466322 caacacggccgggcgcggtggctcaggcctgtaatcccaatactttgggaggccgaggtgggcagatcacaaggtcaggagatcgaaacctacctggctaacacggtgaaaccccgtctctactaaaaacacaaaaaattagctgggcgtggtgtcaggtgcctgtagtcccagctactggggaggctgaggcaggagaatgccgtgaacctgggaggc-gagctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800297 225 + 43916225 caacacagccgggcgcggtggctcaggcctgtaatcccaatactttgggaggccgaggtgggcagatcacaaggtcaggagatcgaaacctacctggctaacacggtgaaaccccgtctctactaaaaacacaaaaaattagctgggcgtggtgtcaggtgcctgtagtcccagctactggggaggctgaggcaggagaatgctgtgaacctgggaggc-gagctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226119 225 + 75399963 caacacggccgggcgcagtggctcacgcctgtaatcccaatagtttgggaggctgaggtgggcagatcacgaggtcaggagatcgaaacctacctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgggtgcctgtagtctcagctactggggaggctgaggcaggagaatggcatgaacccgggaggc-gagctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6790814 225 - 7209941 caacatggccgggcgcggtggctcaggcctgtaatcccaatactttgggaggccgaggtgggcagatcacaaggtcaggagatcgaaacctacctggctaacacggtgaaaccccgtctctactgaaaacacaaaaaattagctgggcgtggtgtcaggtgcctgtagtcccagctactggggaggctgaggcaggagaatgccgtgaacctgggaggc-gagctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533344 225 + 3907144 caacatggctgggcgtggtggctcacgtctgtaatcccaatactttgggaggccgaggcaggcagatcacgaggtcaggagattgaaacctacctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcgtggtggcgggtgcctgtagtcccagctactggggaggccgaggcaggagaatgccatgaacctgggaggt-gagctg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e saiBol1.JH378225 6347789 2 + 6628207 I e calJac3.chr20 21535302 2 - 44557958 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=187232.000000 s hg38.chr16_GL383557v1_alt 55705 39 + 89672 gcagtgagccaagactgcgccactgcactccagcctggg s panTro5.chr16 21487220 39 - 81586097 gcagtgagccaagactgcgccactgcactccagcctggg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549209 39 - 90481686 gcagtgagccaagactgcgccactgcactccagcctggg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781611 39 + 3010529 gcagtgagccaagaccgcgccactgcactccagcctggg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21366963 39 - 74971481 gcagtgagccgagaccgcgccactgcactccagcctggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21078961 39 - 78541002 gcagtgagccgagaccgcgccactgcactccagcctggg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472334 39 + 26466322 gcagtgagccgagaccgtgccactgcactccagcctggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800522 39 + 43916225 gcagtgagccgagaccgcgccactgcactccagcctggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226344 39 + 75399963 gcagtgagctgagatccggccactgcactccagcctggg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791039 39 - 7209941 gcagtgagctgagaccgtgccactgcactccagcctggg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533569 39 + 3907144 gcagcgagccgtgaccgcaccactgcactccagcctggg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e saiBol1.JH378225 6347789 2 + 6628207 I e calJac3.chr20 21535302 2 - 44557958 I e otoGar3.GL873566 13711895 351 + 13852661 I e nomLeu3.chr2 53893126 327 + 163208435 M a score=133357.000000 s hg38.chr16_GL383557v1_alt 55744 41 + 89672 tgacagagtgagact--gt-ctcaa---aaaaaaaaaaaaaaaaaaa s panTro5.chr16 21487259 41 - 81586097 tgacagagtgagact--gt-ctaaa---aaaaaaaaaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549248 42 - 90481686 tgacagagtgagact--gtacttaa---aaaaaaaaaaaaaaaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781650 30 + 3010529 tgacagagtgagact--gt-ctcaa---aaaaaaaa----------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893453 41 + 163208435 TGGCAGAGCGAGACT--GT-CTCaa---aaaaaaaaaaaaaaaaaaa i nomLeu3.chr2 M 327 C 0 s rheMac8.chr20 21367002 43 - 74971481 tgacacagcgagactccgt-ctcaa---aacaacaacaacaacaaca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079000 43 - 78541002 tgacacagcgagactccgc-ctcaa---aacaacagcaacaacaaca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472373 43 + 26466322 tgacacagcgagactccgt-ctcaa---aacaacaacaacaacaaca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800561 40 + 43916225 tgacagagcgagactccgt-ctcaa---aacaa---caacaacaaca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226383 46 + 75399963 tgacagagcgagactccgt-ctcaaaacaacaacaacaacaacaaca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791078 40 - 7209941 tgacagagcgagactccgt-ctcaa------aacaataacaacaaca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533608 37 + 3907144 tgacagagcgagactccgt-ctcaa---------aacaacaacaaca i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e dasNov3.JH569970 927715 178 + 1009443 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e saiBol1.JH378225 6347789 2 + 6628207 I e calJac3.chr20 21535302 2 - 44557958 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=-20659.000000 s hg38.chr16_GL383557v1_alt 55785 18 + 89672 aaaaaaacaaaccagaaa- s panTro5.chr16 21487300 7 - 81586097 -----------ccagaaa- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549290 9 - 90481686 ---------aaCCAGAAA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781680 7 + 3010529 -----------ccagaaa- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21367045 1 - 74971481 -----------------a- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079043 1 - 78541002 -----------------a- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472416 1 + 26466322 -----------------a- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800601 1 + 43916225 -----------------a- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226429 1 + 75399963 -----------------a- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791118 1 - 7209941 -----------------a- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533645 1 + 3907144 -----------------a- i colAng1.NW_012123265v1 C 0 C 0 s dasNov3.JH569970 927893 18 + 1009443 -AAAAGAATAGCTTAAAAT i dasNov3.JH569970 I 178 I 2 e canFam3.chr5 80469536 168 + 88915250 I e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e saiBol1.JH378225 6347789 2 + 6628207 I e calJac3.chr20 21535302 2 - 44557958 I e otoGar3.GL873566 13711895 351 + 13852661 I e nomLeu3.chr2 53893494 0 + 163208435 C a score=-2634.000000 s hg38.chr16_GL383557v1_alt 55803 1 + 89672 g s panTro5.chr16 21487307 1 - 81586097 g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549299 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781687 1 + 3010529 g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893494 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367046 1 - 74971481 c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079044 1 - 78541002 c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472417 1 + 26466322 c i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800602 1 + 43916225 c i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226430 1 + 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791119 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533646 1 + 3907144 c i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80469704 1 + 88915250 G i canFam3.chr5 I 168 C 0 s dasNov3.JH569970 927913 1 + 1009443 G i dasNov3.JH569970 I 2 C 0 e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e cebCap1.NW_016107433v1 3324483 4988 - 5917169 I e saiBol1.JH378225 6347789 2 + 6628207 I e calJac3.chr20 21535302 2 - 44557958 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=24752.000000 s hg38.chr16_GL383557v1_alt 55804 2 + 89672 aa s panTro5.chr16 21487308 2 - 81586097 aa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549300 2 - 90481686 Aa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781688 2 + 3010529 aa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893495 2 + 163208435 aa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367047 2 - 74971481 aa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079045 2 - 78541002 aa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472418 2 + 26466322 aa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800603 2 + 43916225 aa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226431 2 + 75399963 aa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791120 2 - 7209941 aa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533647 2 + 3907144 aa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535304 2 - 44557958 Aa i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6347791 2 + 6628207 Aa i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3329471 2 - 5917169 Aa i cebCap1.NW_016107433v1 I 4988 C 0 s canFam3.chr5 80469705 2 + 88915250 Aa i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 927914 2 + 1009443 Aa i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e aotNan1.NW_018500622v1 9283409 4862 - 10531588 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=4078717.000000 s hg38.chr16_GL383557v1_alt 55806 362 + 89672 agaaaaagacaacacattagggg-aaaaa----aaggagaaagggttatgaatatgtaattcatgcaattggccaaacagcc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcagagtaaaatgagatagcgtttttcacccattggataggctaaaatta--gtctgccaatacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaaacagccagtac---gaagg--------------ccaaataaaagtgaaagaaaatggacacag-tatgagccaca---------cccaggaact----ggcccaag----aaacacccagacatgagcaccaggagacaatgtcctagattgtacatTACTACACTC s panTro5.chr16 21487310 362 - 81586097 agaaaaagacaacacattagggg-aaaaa----aaggagaaagggttatgaatatgtaattcatgcaattggccaaacagcc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcagagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctgccaatacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaAAACAGCCAGTAC---GAAGG--------------CCAAATAAAAGTGAAAGAAAATGGACACAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCAGACATGAGCACCAGGAGACAATGTCCTAGATTGTACATTACTACACTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549302 361 - 90481686 agaaaaagacaacacattagggg--aaaa----aaggagaaagggttatgaatatgtaattcatgcaattggccaaacagcc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcagagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctgccaatacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaAAACAGCCAGTAC---GAAGG--------------CCAAATAAAAGTGAAAGAAAATGGACACAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCAGACATGAGCACCAGGAGACAATGTCCTAGATTGTACATTACTACACTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 781690 361 + 3010529 agaaaaagacaacacattaggggaaaaaa----aaggagaaagggttatgaatatgtaattcatgcaattggccaaacagcc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcagagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctgccaatacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaAACAGCCAGTAC---GAAGG--------------CCAAATAAAAGTGAAAGAAAATGGACACAGTTATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCAGACATGAG---CAGGAGACAATGTCCTAGATTGTACATTACTACACTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893497 361 + 163208435 agaaaaagacaacacattaggga--aaaa----aaggagaaagggttatgaatatgtaattcgtgcaattggccaaacagcc-aaacacat---aaa-gtgagcaacctcattagtaaacaggcaaatgcagagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctgccaatacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaAAACAGCCAGTAC---GAAGG--------------CCAAATAAAAGTGAAAGAAAATGGACACAG-TATGAGCCACA---------CCCAGGAACT----GGCCCAAG----AAACACCCAGACATGAGCACCAGGAGACAATGTCCTATATTGTACATTACTACACTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367049 362 - 74971481 agaaaaagacaacacattagggg-aaaaa----aaggagaaagggttacgaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaaacagccagact---gaagg--------------ccaaATAAAAGTGAAAGAAAATGGACAAAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCGGACATGAGCACTAGGAGACAAGGTCCTAGATTGTACATTACTACACTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079047 362 - 78541002 agaaaaagacaacacattagggg-aaaaa----aaggagaaagggttacgaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaaacagccagact---gaagg--------------ccaaataaaagtgaaagaaaatggacaaag-tatgagccaca---------cccaggaatt----ggcccaag----aaacacccggacatgagcactaggagacaaggtcctagattgtacattactacactc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472420 362 + 26466322 agaaaaagacaacacattagggg-aaaaa----aaggagaaagggttatgaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaaacagccagact---gaagg--------------ccaaATAAAAGTGAAAGAAAATGGACAAAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCGGACATGAGCACTAGGAGACAAGGTCCTAGATTGTACATTACTACACTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800605 362 + 43916225 agaaaaagacaacacactagggg-aaaaa----aaggagaaagggttacgaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaaacagccagact---gaagg--------------ccaaATAAAAGTGAAAGAAAATGGACAAAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCGGACATGAGCACTAGGAGACAAGGTCCTAGATTGTACATTACTACACTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226433 362 + 75399963 AGAAAAAgacaacacattagggg-aaaaa----aaggagaaagggttacaaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaagagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataacgaaacaaatactttcaaacactgctgatgggaaaacagccagact---gaagg--------------ccaaataaaagtgaaagaaaatggacaaag-tatgagccaca---------cccaggaatt----ggcccaag----aaacacccggacatgagcactaggagacaaggtcctagattgtacattactacactc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791122 362 - 7209941 agaaaaagacaacacattagggg-aaaaa----aaggagaaagggttacgaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataaggaaacaaatactttcaaacactgctgatgggaaaacagccagact---gaagg--------------ccaaATAAAAGTGAAAGAAAATGGACAAAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCGGACATGAGCACTAGGAGACAAGGTCCTAGACTGTACATTACTACACTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 533649 362 + 3907144 agaaaaagacaacacattagagg-aaaaa----aaggagaaagggttacaaatatgtaattcacgcaattggccaaacattc-aaacacat---aaa-gtgagcaacctcattagtaaacagggaaatgcaaagtaaaatgagatagcatttttcacccattggataggctaaaatta--gtctaccagtacattggtaag-gaataagaaaacaaatactttcaaacactgctgatgggaaaacagccagtcc---gaagg--------------ccaaATAAAAGTGAAAGAAAATGGACAAAA-TATGAGCCACA---------TCCAGGAATT----GGCCCAAG----AAACACCCAGACATGAGCACTAGGAGACAAGGTCCTAGACTGTACATTACTACACTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535306 364 - 44557958 agaaaaagacaacacattaggaa-caaaa--aaaaggagaaaggattatgaatatgtggttcatgcaattggccaaacagtc-aaacacat---aaa-gtaagcaacctcattagtaaacagagaaatggaaagtaaaattagatagtgtttttcacccattggataggctaaaatta--gtccgtcaatacattgataag-gtataaggaaatacatattttcaaacactgctgatgggaAAGCAGCCAGTTT---GAAGG--------------CCAAATAAAAGTGAAAGAAAATGGACACAG-TACGAGCCACA---------CCCAGGAGTT----GGCCCAAG----AAACACCCTGACATGAGCACGAGGAGACAATGTCCTAGATTGTACATTACTATGCTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6347793 363 + 6628207 agaaaaagacaacacattaggaa-caaaa-caaaaggaaaaaggattatgaatatgtagttcatgcaactggccaaacagtt-aaacacat---gaa-gtaaa------cattaataaacagagaaacggaaagtaaaattagacagcgtttttcacccattggataggctaaaatta--gcacgtcaatacattgttaag-ttataaggaaatacatattttcaaatgctgctgatgggaAAACAGCCAGTTT---GAAGG--------------CCAAATAAAAGTGAAAGAAAATGGACACAG-TATGAGCCACA---------CCCAGGAATT----AGCCCAAGAAACAAACACCCTGACATGAGCACTAGGAGACAATGTCCTAGATTGTACATTACTATACTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329473 366 - 5917169 agaaaaagacaacacattaggaa-caaaaaaaaaaggagaaaggattatgaatatgtggttcatgcaattggccaaacagtc-aaacacat---aaa-ataagcaacttcattagtaaacagagaaatggaaagtaaaattagatagcgtttttcacccattggataggctaaaatca--gtccgtcaatacattggtaag-ttataaggaaacacatatttccaaacactgctgatgggaaaacagccagatt---gaagg--------------ccaaATAAAAGTGAAAGAAAACGGACACAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCTGACATGAGCACTAGGAGACAATGTCCTAGATTGTACATTACTATACTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288271 365 - 10531588 agaaaaagacaacacattaggaa-caaaa-aaaaaggagaaaggattatgaatatgtggttcatgcaattggccaaacagtc-aaacacat---aaa-gtaagcaacctcattagtaaacagagaaatggaaagtaaaattagatagcgtttttcacccattggaaaggctaaaatta--gaccgtcaatacattggtaag-gtataaggaaatacatattttcaaacactgctgatgggaaaacagccagttt---gaagg--------------ccaaATAAAAGTGAAAGAAAATGGACACAG-TATGAGCCACA---------CCCAGGAATT----GGCCCAAG----AAACACCCTGACATGAGCACTAGGAGACAATGTCCTAGACTGTACATTACTACACTC i aotNan1.NW_018500622v1 I 4862 C 0 s canFam3.chr5 80469707 358 + 88915250 agaagaaaacaacacattaggga-aaaag---------gaagaggttatgaatattcaattta--caattagctcagcaaccaaaacacattaaaaa-atgaacaatatctttagtaaacagacaaatgc-----aaaatgagatattatttttcacccattagatgggttacaactaatgtctatcactacactggcaagagtataaggaaatgagtactttcaaacactgtggttagaaatatagccactccacaaaaag--------------caagtgaaaagtgaaagaaaatgcacactg-tatgaga--------------tcaggagttctacttcccaaa----ctctactccccttagagcgctaccccacgatgtactagactgttcattaaaacact- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 927916 376 + 1009443 agaaaaagacaa------------aaaag----gggaggggtgaggtatgaatatgcaatttaggcaactagccaaataaccaaaacacat---gagcgtgtgcaatctcattagtaagcagggaaatgcaaaataaaatgagatactattttttacccatttgatgggctaaaattaatgtctgttaac-catcagcaaa-gtataaagaagtgagtactttcaaacg-tattgataggaaaacagccactca---gaagggcaatttggctgcaccaattaaaagtgaaagaaaataggtacac-tctgaactaccaagtccattcctaagaatt----aactagaa----aaacactcccatctgagcaacaggagacactgtacaaggctgttcattagaacaCTC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2944754 831 + 9850184 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=438122.000000 s hg38.chr16_GL383557v1_alt 56168 33 + 89672 TATATGACTAACACAAAAGACTGCCCACATAAC s panTro5.chr16 21487672 33 - 81586097 TATATGACTAACACAAAAGACTGCCCACATAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549663 33 - 90481686 TATATGACTAACACAAAAGACTGCCCACATAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782051 33 + 3010529 TATATGACTAACACAAAAGACTGCCCACATAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893858 33 + 163208435 TATATGACTAACACAAGAGACTGCCCACATAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367411 33 - 74971481 TGTATGACTAACACAAAAGACTGCCCACATAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079409 33 - 78541002 tgtatgactaacacaaaaGACTGCCCACATAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472782 33 + 26466322 TGTATGACTAACACAAAAGACTGCCCACATAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20800967 33 + 43916225 TGTATGACTAACACAAAACACTGCCCACATAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226795 33 + 75399963 tgtatgactaacacaaaaGACTGCCCACATAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791484 33 - 7209941 TGTATGACTAACACAAAAGACTGCCCACATAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534011 33 + 3907144 TGTATGACTAACACAAAAGACTGCCCACATAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535670 33 - 44557958 TATATGATTAACAAGAAAGACTGCCCACATAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348156 33 + 6628207 TATATGACTAACAAGAAAGACTGCCCACATAAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329839 33 - 5917169 TATATGACTAACAAGAAAGACTGCCCACATAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288636 33 - 10531588 TATATGACTAACAAGAAAGACTGCCCGTATAAC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2945585 33 + 9850184 TATATGATTAACACAAAAGACTGCCCACATAAC i proCoq1.NW_012152729v1 I 831 I 137 s canFam3.chr5 80470065 28 + 88915250 -----gattTACACACAAGACTGTCCAAAGAAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 928292 31 + 1009443 --TATGATTAACTCAAAAATCTGCCCACATAAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=383742.000000 s hg38.chr16_GL383557v1_alt 56201 28 + 89672 TCAATATTACAGCTAGATCAAGTGCTCA s panTro5.chr16 21487705 28 - 81586097 TCAATATTACAGCTAGATCAAGTGCTCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549696 28 - 90481686 TCAATATTACAGCTAGATCAAGTGCTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782084 28 + 3010529 TCAATATTACAGCTAGATCAAGTGCTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893891 28 + 163208435 TCAATGTTACAGCTAGATCAAGTGCTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367444 28 - 74971481 TCAGTATTACAGCTAGATCAGGTGCTCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079442 28 - 78541002 TCAGTATTACAGCTAGATCAGGTGCTCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472815 28 + 26466322 TCAGTATTACAGCTAGATCAGGTGCTCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801000 28 + 43916225 TCAATATTACAGCTAGATCAGGTGCTCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226828 28 + 75399963 TCAATATTACAGCTAGATCAGGTGCTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791517 28 - 7209941 TCAATATTACAGCTAGATCAGGTGCTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534044 28 + 3907144 TCAATATTACAACTAGATCAAGTGCTCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535703 28 - 44557958 TCAATATTACAGCCAGATCAAGTGCTCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348189 28 + 6628207 TCAATATTACAGCCAGATCAAGTGCTCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329872 28 - 5917169 TCAATATTACAGCCAGATCAAGTGCTCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288669 28 - 10531588 TCAATATTACAGCCAGATCAAGTGCTCA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2945755 28 + 9850184 TCAATATTATAGCTAGATCAAGTGCTCA i proCoq1.NW_012152729v1 I 137 I 135 s canFam3.chr5 80470093 28 + 88915250 GCAGTATTATAGCTAAATCAAGTGTTCA i canFam3.chr5 C 0 I 20 s dasNov3.JH569970 928323 28 + 1009443 CTAATAATATAGCAAAGTCAAGCACTCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=69288.000000 s hg38.chr16_GL383557v1_alt 56229 10 + 89672 --------AACACCTT-------CC----- s panTro5.chr16 21487733 10 - 81586097 --------AACACCTT-------CC----- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549724 10 - 90481686 --------AACACCTT-------CC----- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782112 9 + 3010529 --------AACACCTT--------C----- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893919 10 + 163208435 --------AACACCTT-------CC----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367472 17 - 74971481 --------AACACCTTCCCCCTTCC----- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079470 17 - 78541002 --------AACACCTTCCCCCTTCC----- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472843 17 + 26466322 --------AACACCTTCCCCCTTCC----- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801028 17 + 43916225 --------AACACCTTCCCCCTTCC----- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226856 17 + 75399963 --------AACACCTTCCCCCTTCC----- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791545 17 - 7209941 --------AACACCTTCCCCCTTCC----- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534072 17 + 3907144 --------AACACCTTCCCCCATCC----- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535731 10 - 44557958 --------AACACCTG-------CC----- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348217 10 + 6628207 --------AACACCTT-------CC----- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329900 10 - 5917169 --------GACACCTT-------CC----- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288697 10 - 10531588 --------AACACCTT-------CC----- i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80470141 10 + 88915250 --------AACACCTT-------TG----- i canFam3.chr5 I 20 C 0 s dasNov3.JH569970 928351 23 + 1009443 CTCAGAGCAAGATATT-------CTCTGTC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54935732 1013 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=448413.000000 s hg38.chr16_GL383557v1_alt 56239 33 + 89672 CTGTAGCCTACGA------AACGGAAAATCCTTTGTGTA s panTro5.chr16 21487743 33 - 81586097 CTGTAGCCTACGA------AACAGAAAATCCTTTGTGTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549734 33 - 90481686 CTGTAGCCTACGA------AACAGAAAATCCTTTGTGTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782121 33 + 3010529 CTGTAGCCCACGA------AACGGAAAATACTTTGTGTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893929 33 + 163208435 CTGTAGCCTACGA------AATGGAAAATCCTTTGTGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367489 33 - 74971481 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079487 33 - 78541002 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472860 33 + 26466322 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801045 33 + 43916225 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226873 33 + 75399963 CTGTAGCCTATGA------AATGGAAAATCCTCTGTGTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791562 33 - 7209941 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534089 33 + 3907144 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535741 33 - 44557958 CTCTAGCCTATGA------AATGGAAAATCCTTTGTGTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348227 33 + 6628207 CTGTAGCCTATGA------AATGGAAAATCCTTTGTGTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329910 33 - 5917169 CTGTAGCCTACGA------AATGGAAAATCCTTTGTGTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288707 33 - 10531588 CTGTAGCCTACGA------AATGGAAAATCCTTTGTGTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54936745 33 + 72247402 CTGCAGCCTATGA------AACGAAAAATCCTTTGTGTA i micMur3.chr20 I 1013 I 82 s canFam3.chr5 80470151 33 + 88915250 CTGCAGCCTGTGA------GATGGAAAATCTTTGGTGTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 928374 38 + 1009443 CTGTAGCCAATAACACAATGATGTAAAATCCTT-GTGTA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=162225.000000 s hg38.chr16_GL383557v1_alt 56272 16 + 89672 TCATGCCTGCTAATCA s panTro5.chr16 21487776 16 - 81586097 TCATGCCTGCTAATCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549767 16 - 90481686 TCATGCCTGCTAATCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782154 16 + 3010529 TCATGCCTGCTAATCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893962 16 + 163208435 TCATGCTGGCTAATCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367522 16 - 74971481 TCATGCCTGCTAATCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079520 16 - 78541002 TCATGCCTGCTAATCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472893 16 + 26466322 TCATGCCTGCTAATCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801078 16 + 43916225 TCATGCCTGCTAATCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226906 16 + 75399963 TCATGCATGCTAATCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791595 16 - 7209941 TCATGCCTGCTAATCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534122 13 + 3907144 TCATGCCTGCTA---A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535774 16 - 44557958 TCATAACTGCTAATCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348260 16 + 6628207 TCATAACTGCTAATCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329943 16 - 5917169 TCGTAACTGCTAATCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288740 16 - 10531588 TCATAAATGCTAATCA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80470184 16 + 88915250 TCATGCCTGCTAGTCA i canFam3.chr5 C 0 I 695 s dasNov3.JH569970 928412 5 + 1009443 -----------AATCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=106324.000000 s hg38.chr16_GL383557v1_alt 56288 10 + 89672 TCAtgttaca s panTro5.chr16 21487792 10 - 81586097 TCAtgttaca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549783 10 - 90481686 TCAtgttaca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782170 10 + 3010529 TCAtgttaca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893978 10 + 163208435 TCAtgttaca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367538 10 - 74971481 TCAtgttaca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079536 10 - 78541002 TCAtgttaca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472909 10 + 26466322 TCAtgttaca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801094 10 + 43916225 TCAtgttaca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226922 10 + 75399963 TCAtgttaca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791611 10 - 7209941 TCAtgttaca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534135 10 + 3907144 TCAtgttaca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535790 10 - 44557958 TTGtgttaca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348276 10 + 6628207 CTGtgttaca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329959 10 - 5917169 TTGtgttaca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9288756 10 - 10531588 TTGtgttaca i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 928417 10 + 1009443 TCACATCACA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=886769.000000 s hg38.chr16_GL383557v1_alt 56298 98 + 89672 ggaaaggggtcacaatccaga-ccccaagagagggttcttggatcttatgcaagaaagaattcagggcgagttggtaaagtgaaagcaagtttattaag s panTro5.chr16 21487802 98 - 81586097 ggaaagtggtcccaatccaga-ccccaagagagggttcttggatcttatgcaagaaagaattcagggcgagttggtaaagtgaaagcaagtttattaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549793 98 - 90481686 ggaaagtggtcccaatccaga-ccccaagagagggttcttggatcttatgcaagaaagaattcagggcgagttggtaaagtgaaagcaagtttattaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782180 97 + 3010529 ggaaaggggtc-caatccaga-ccccaagagagggttcttggatcttacgcaagaaagaattcagggcgagttggtaaagtgaaagcaagtttattaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53893988 97 + 163208435 ggaaaggggtcccaatccaga-ccccaagagagggttcttggatcttacgcaa-aaagaattcagggcgagtcagtaaagtgaaagcaagtttattaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367548 98 - 74971481 ggaaaggggtcctgatccaga-cctgaagagagggtgcgtggatcttatgcaagaaagaattcagggcgaatccataaagtgaaagcaagtttattaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079546 98 - 78541002 ggaaaggggtcctgatccaga-cctgaagagagggtgcgtggatcttatgcaagaaagaattcagggcgaatccgtaaagtgaaagcaagtttattaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14472919 98 + 26466322 ggaaaggggtcctgatccaga-cctgaagagagggtgcgtggatcttatgcaagaaagaattcagggcgaatccgtaaagtgaaagcaagtttattaag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801104 98 + 43916225 ggaaaggggtcctgatccaga-cctgaagagagggtgcgtggatcttatgcaagaaagaattcagggcgaatccgtaaagtgaaagcaagtttattaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58226932 97 + 75399963 ggaaaggggtcctgatccaga-cccgaagag-gggtgcgtggatcttatgcaagacagaattcagggcgaatccgtaaagtgaaagcaagtttattaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791621 98 - 7209941 ggaaaggggtcctgatccaga-cctgaagagagggtgcgtggatcttatgcaagaaagaattcagggcgaatccgtaaagtgaaagcaagtttattaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534145 98 + 3907144 ggaaaggggtcctgatccaga-cccgaagagatggtgcttggatcttacgcaagaaagaattcaggacgagtccgtaaagtgaaagcaagtttattaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535800 99 - 44557958 ggaaaggggtcctgatccagacccccacgagagggtttttgaatcttatgcaagaaagaattcagggcaagtctgtaaagtgaaagcaagtttattaag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348286 98 + 6628207 ggaaaggggtcccaatccagacccccacaagagggcttttgaatcttacgcaag-aataattcagggcaagtctgtaaagtgaaagcaagtttattaag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3329969 98 - 5917169 agaaaggggtcccaatccagacccccacaagagggtttttgaatgttatgcaag-aagaattcagggcaagtctgtaaagtgaaagcaagtttattaag i cebCap1.NW_016107433v1 C 0 I 2791 s aotNan1.NW_018500622v1 9288766 99 - 10531588 ggaaaggggtcccgatccagacccccactagagggtttttgaatcttatgcaagaaacaattaagggcaagtctgtaaagtgaaagcaagtttattaag i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e otoGar3.GL873566 13711895 351 + 13852661 I a score=69237.000000 s hg38.chr16_GL383557v1_alt 56396 9 + 89672 caagtgaag s panTro5.chr16 21487900 9 - 81586097 caagtgaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549891 9 - 90481686 caagtgaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782277 9 + 3010529 aaagtgaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894085 9 + 163208435 aaagtgaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367646 9 - 74971481 aaaatgaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079644 9 - 78541002 aaaatgaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14473017 9 + 26466322 aaaatgaag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20801202 9 + 43916225 aaaatgaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58227029 9 + 75399963 aaaatgaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791719 9 - 7209941 aaaatgaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534243 9 + 3907144 aaagtgaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21535899 9 - 44557958 taagtgaag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6348384 9 + 6628207 taagtgaag i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9288865 9 - 10531588 taagtgaag i aotNan1.NW_018500622v1 C 0 I 1008 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=22509.000000 s hg38.chr16_GL383557v1_alt 56405 3 + 89672 gaa s panTro5.chr16 21487909 3 - 81586097 gaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549900 3 - 90481686 gaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782286 3 + 3010529 gaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894094 3 + 163208435 gaa i nomLeu3.chr2 C 0 I 20 s rheMac8.chr20 21367655 3 - 74971481 gaa i rheMac8.chr20 C 0 I 20 s macFas5.chr20 21079653 3 - 78541002 gaa i macFas5.chr20 C 0 I 20 s macNem1.NW_012011355v1 14473026 3 + 26466322 gaa i macNem1.NW_012011355v1 C 0 I 857 s cerAty1.NW_011999143v1 20801211 3 + 43916225 gaa i cerAty1.NW_011999143v1 C 0 I 20 s chlSab2.chr5 58227038 3 + 75399963 gaa i chlSab2.chr5 C 0 I 20 s manLeu1.NW_012101698v1 6791728 3 - 7209941 gaa i manLeu1.NW_012101698v1 C 0 I 20 s colAng1.NW_012123265v1 534252 3 + 3907144 gaa i colAng1.NW_012123265v1 C 0 I 20 s calJac3.chr20 21535908 3 - 44557958 aaa i calJac3.chr20 C 0 I 1736 s saiBol1.JH378225 6348393 3 + 6628207 aaa i saiBol1.JH378225 C 0 I 1327 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e aotNan1.NW_018500622v1 9288874 1008 - 10531588 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=153752.000000 s hg38.chr16_GL383557v1_alt 56408 32 + 89672 agccagagcagcctcaaggctggttgcccatt s panTro5.chr16 21487912 32 - 81586097 agccagagcagccccaaggctggttgcccatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549903 32 - 90481686 agccagagcagccccaaggctggttgcccatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782289 32 + 3010529 agccagagcagccccaaggctggttgcccatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894117 32 + 163208435 agacagagcagccccgaggcttgttgcccatt i nomLeu3.chr2 I 20 C 0 s rheMac8.chr20 21367678 32 - 74971481 agacagagcagccccgaggctggttgcccatt i rheMac8.chr20 I 20 C 0 s macFas5.chr20 21079676 32 - 78541002 agacagagcagccccgaggctggttgcccatt i macFas5.chr20 I 20 C 0 s cerAty1.NW_011999143v1 20801234 32 + 43916225 agacagagcagccccgaggctggttgcccatt i cerAty1.NW_011999143v1 I 20 C 0 s chlSab2.chr5 58227061 32 + 75399963 agacagagcagccccgaggctggttgcccatt i chlSab2.chr5 I 20 C 0 s manLeu1.NW_012101698v1 6791751 32 - 7209941 agacagagcagccccgaggctggttgcccatt i manLeu1.NW_012101698v1 I 20 C 0 s colAng1.NW_012123265v1 534275 32 + 3907144 agatagagcagccccgaggctggttgcccaat i colAng1.NW_012123265v1 I 20 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e aotNan1.NW_018500622v1 9288874 1008 - 10531588 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e macNem1.NW_012011355v1 14473029 857 + 26466322 I e saiBol1.JH378225 6348396 1327 + 6628207 I e calJac3.chr20 21535911 1736 - 44557958 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=633325.000000 s hg38.chr16_GL383557v1_alt 56440 97 + 89672 tttatggttcttttc----ttttttt----tttggagacacagcctcactctgccg-ccaggctggagtgcagtggtgcgatctcggctcactgcaacctctgcct s panTro5.chr16 21487944 93 - 81586097 tttatggttctttt--------tttt----tttggagacacagcctcactctgccg-ccaggctggagtgcagtggtgcgatctcggctcactgcaacctctgcct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21549935 93 - 90481686 tttatggttctttt--------tttt----ttggtagacacagcctcactctgccg-ccaggctggagtgcagtggtgcgatctcggctcactgcaacctctgcct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782321 99 + 3010529 tttatggttcttttc--ttttttttt----tttggagacacagcctcactctgccg-ccaggctggagtgtagtggtgcgatctcggctcactgcaacctctgcct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894149 95 + 163208435 tttatggttctttt------tttttt----tttagagacagagcctcactctgccc-ccaggctggagtgcagtggtgcgatctcggctcactgcaacctctgcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367710 99 - 74971481 tttat-gttcttttct-ttttttttt----tttggagacagagcttcactctgcca-ccaggctggagtgcagtggtgtgatctcggctcactgcaacctctgcct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21079708 99 - 78541002 tttat-gttcttttct-ttttttttt----tttggagacagagcttcactctgcca-ccaggctggagtgcagtggtgtgatctcggctcactgcaacctctgcct i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20801266 98 + 43916225 tttat-gttcttttc--ttttttttt----tttggagacagagcttcactctgcca-ccaggctggagtgcagtggtgtgatctcggctcactgcaacctctgcct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58227093 97 + 75399963 tttat-gttcttttc---tttttttt----tttggagacagagcctccctctgcca-ccaggctggagtgcagtggtgtgatctcggctcactgcaacctctgcct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6791783 99 - 7209941 tttat-gttcttttct-ttttttttt----tttggagacagagcttcactctgcca-ccaggctggagtgcagtggtgtgatctcgactcactgcaacctctgcct i manLeu1.NW_012101698v1 C 0 I 451 s colAng1.NW_012123265v1 534307 101 + 3907144 tttatggttcttttctcctttttttt----tttggagacaatgcctcactctgccg-ccaggctggagtgcagtggtgtgatcttggctcactgcaacctctgcct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21537647 95 - 44557958 TTTATGGttcttttc--tttc---------ttttgagacagagcctcactctctcgcccaggttggagtgcagtggtgtgatatcagctcactggaacctctgccc i calJac3.chr20 I 1736 C 0 s saiBol1.JH378225 6349723 104 + 6628207 TTTATGGttcttttc--tttctttttctttttttgagacagagcctcactctctcgcccaggttggagtgtagtggtgtgatctcagctcactgcaacctctgctg i saiBol1.JH378225 I 1327 C 0 s aotNan1.NW_018500622v1 9289882 100 - 10531588 TTTATGGttctttct--ttttctttt----ttttgagacagagcctcactctctcgcccaggttggagtgcagtggtgtgatcttggctcactgcaacctctgccc i aotNan1.NW_018500622v1 I 1008 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e macNem1.NW_012011355v1 14473029 857 + 26466322 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=466423.000000 s hg38.chr16_GL383557v1_alt 56537 79 + 89672 gcccagttcaagtgattcttctgcctcagcctccctagtagctgggactataggtgtgtgccaccatgcccagctaatt s panTro5.chr16 21488037 79 - 81586097 gcccagttcaagtgattctcctgcctcagcctccctagtagctgggactataggtgtgtgccaccatgcccagctaatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550028 79 - 90481686 gcccagttcaagtgattctcctgcctcagcctccctagtagctgggactataggtgtgtgccaccatgcccagctaatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782420 79 + 3010529 gcccagttcaagtgattctcctgcctcagcctccctagtagctgggactataggtgtgtgccaccatgcccagctaatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894244 79 + 163208435 gcccagttcaagtgattctcctgcctcagcctccctagtagccaggactataggtgtgtgccaccatgcccagctactt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21367809 79 - 74971481 gcccagttcaagtgagtctcctgcctcagcctccctagtagctgggactataggtgtgcaccaccaggcctggctaatt i rheMac8.chr20 C 0 I 301 s macFas5.chr20 21079807 79 - 78541002 gcccagttcaagtgagtctcctgcctcagcctccctagtagctgggactataggtgtgcaccaccaggcctggctaatt i macFas5.chr20 C 0 I 302 s cerAty1.NW_011999143v1 20801364 79 + 43916225 gcccagttcaagtgagtctcctgcctcagcctccctagtagctgggactataggtgtacaccaccaggcctggctaatt i cerAty1.NW_011999143v1 C 0 I 304 s chlSab2.chr5 58227190 75 + 75399963 gcccag----agtgagtctcctgcctcagcctccctagtagctgggactataggtgtgcaccaccaggcctggctaatt i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 534408 79 + 3907144 gcccagttcaagtgattctcctgcctcagcctccctagtagctgggactataggtgtgcaccaccacgcctggctaatt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21537742 77 - 44557958 gccaggttccagcaattctc--gtctcagcctccctaataactggtactataggcctgtgctaccacacccagctaatt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6349827 79 + 6628207 gccaggttcaagcaattctcctgtctcagcctccctaataactggtactataggcctgtgctaccacacccagctaatt i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9289982 79 - 10531588 accaggttcaagcaattctcctgtctcagcctccctaataactggtactataggcctgtgctaccacactcggctaatt i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e macNem1.NW_012011355v1 14473029 857 + 26466322 I e manLeu1.NW_012101698v1 6791882 451 - 7209941 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=11794.000000 s hg38.chr16_GL383557v1_alt 56616 6 + 89672 tttg-t---a s panTro5.chr16 21488116 6 - 81586097 tttg-t---a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550107 6 - 90481686 tttg-t---a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782499 7 + 3010529 tttgtt---t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894323 6 + 163208435 tttt-t---a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368189 6 - 74971481 tttg-t---a i rheMac8.chr20 I 301 C 0 s macFas5.chr20 21080188 6 - 78541002 tttg-t---a i macFas5.chr20 I 302 C 0 s cerAty1.NW_011999143v1 20801747 6 + 43916225 tttg-t---a i cerAty1.NW_011999143v1 I 304 C 0 s chlSab2.chr5 58227265 6 + 75399963 tttg-t---a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792333 6 - 7209941 tttg-t---a i manLeu1.NW_012101698v1 I 451 C 0 s colAng1.NW_012123265v1 534487 6 + 3907144 tttg-t---a i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21537819 8 - 44557958 tata-tata- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6349906 5 + 6628207 tttg-t---- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290061 5 - 10531588 tttg-t---- i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e macNem1.NW_012011355v1 14473029 857 + 26466322 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=2772241.000000 s hg38.chr16_GL383557v1_alt 56622 322 + 89672 tttttttttagtagagacggggtttcaccaagttggccaggttggtctggaactcctgacctcaggtgatctgcccaccacagccttccagagtgctgatattacaggcatgagccaccgcacccagccttttatggttatttcttgatgatatgctaagcaaggagtggattattcatgccttccctgtttagaccatatacggtaacttcctgacgttgccatggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgcggccttcttggttttggtgggttttagcca s panTro5.chr16 21488122 322 - 81586097 tttttttttagtagagacggggtttcaccaagttggccaggttggtctggaactcctgacctcaggtgatctgcccaccacagccttccagagtgctgatattacaggcatgagccaccgcacccagccttttatggttatttcttgatgatatgctaagcaaggagtggattattcatgccttccctttttagaccatatacagtaacttcctgacgttgccatggcatttgtaaactgtcatagcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgtggccttcttggttttggtgggttttagccg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550113 322 - 90481686 tatttttttagtagagacggggtttcaccaagttggccaggttggtctggaactcctgacctcaggtgatctgcccaccacagccttccagagtgctgatattacaggcatgagccaccgcacccagccttttatggttatttcttgatgatatgctaagcaaggagtggattattcatggcttccctttttagaccatatacagtaacttcctgacgttgccatggcatttgtaaactgtcatagcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgtggccttcttggttttggtgggttttagccg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782506 322 + 3010529 tttttttttagtagagacggggtttcaccaagttggccaggttggtctggaactcctgacctcaggtgatccgcccaccacagccttccagagtgctgatattacaggcatgagccaccgcacccagccttttatggttatttcttgatgatatgctaagcaaggagtggattattcatgccttccctttttagaccatatacggtaacttcctgacgttgccatggcatgtgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccggaggtcactcttgttgccgtcttcgttttggtgggttttagctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894329 320 + 163208435 tttttttttagtagagac--ggtttcgccaagttggccaggttggtctggaactcctgatctcaggtgatccacccaccacggccttccacagtgctgatattacaggcatgagccaccgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtagattattcatgccttccctttttagaccatatagggtaacttcctgatgttgccatggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccagaggtcactctcgtggccttcttggttttggtgggttttagccg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368195 320 - 74971481 tttttttttagtagagatggggtttcgccacgttggccaggttggtatggaactc--gacctcaggtgatctgcccaccacggccttccagagtgctgatattacaggcatgagccactgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccctttttagaccatataggataacttcctgatattgccgtggcatttgtaaactgtcatggcgctggtgggagtgtagcagcgaggacgaccagaggtcactcttgtgaccttcttagttttggtgggtgttagctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080194 320 - 78541002 tttttttttagtagagatggggtttcgccacgttggccaggttggtatggaactc--gacctcaggtgatctgcccaccacggccttccagagtgctgatattacaggcatgagccactgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccctttttagaccatataggataacttcctgatattgccgtggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgtgaccttcttagttttggtgggtgttagctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14473886 320 + 26466322 tttttttttagtagagatggggtttcgccacgttggccaggttggtatggaactc--gacctcaggtgatctgcccaccacggccttccagagtgctgatattacaggcatgagccactgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccctttttagaccatataggataacttcctgatgttgccgtggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgtgaccttcttagttttggtgggtgttagctg i macNem1.NW_012011355v1 I 857 C 0 s cerAty1.NW_011999143v1 20801753 317 + 43916225 tttttttttagtagagatggggtttcgccacgttggccaggttggtctggaactc--gacctcaggtgatctgcccaccatggccatccagagtgctgatattacaggcatgagccactgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccttttttagaccatataggataacttcctgacgttgccatggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggatgaccagaggtcactcttgtgac---cttagttttggtgggtgttagctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58227271 320 + 75399963 tttttttttagtagagatggggtttcgccacgttggccaggttggtctggaactc--gacctcaggtgatctgcccaccacggccttccagagtgctgatattacaggcatgagccactgcacccagccttttatgattatttcttgatgatatgctaagcaaggggtggattattcatgccttccctttttagaccatataggataacttcctgacgttgccatggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgtgaccttcttagtgttggtgggttttagctg i chlSab2.chr5 C 0 I 4673 s manLeu1.NW_012101698v1 6792339 320 - 7209941 tttttttttagtagagatggggtttcgccacgttggccaggttggtctggaactc--gacctcaggtgatctgcccaccacgggcttccagagtgctgatattacaggcatgagccactgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccttttttagaccatataggataacttcctgacattgccatggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacgaccagaggtcactcttgtgaccttcttagttttggtgggtgttagctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534494 320 + 3907144 tttttttttagtagagatggggtttcgccacattggccaggttggtctggaactc--gacctcaggtgatccgcccaccacggccttccagagtgctgatattacaggcatgagccactgcacccagccttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccctttttagaccatataggataacttcctgatgttgccatggcatttgtaaactgtcatggcgctggtgggagtgtagcagtgaggacaaccagaggtcactcttgtgaccgtcttggtttcgctgggttttagctg i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21537827 318 - 44557958 tatatttttagtagagatagagtttcaccacattggccaggttggtctggaactcctgacctcaggtgatctacccaccttggcctcccagagtggtagta----aggcatgagccaccacaccTAGGCttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccatttttaaatcatatagggtaacttcctgacgttgccatggcatttgtaagctgtcatggcactggtgggagtgtagcagtaaggacaaccaaaggtgatgcatgtggccatcttggttttggtggattttagctg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6349911 316 + 6628207 tatttttttagtagagac--agtttcaccacattggccaggttggtctggaactcctgacctcaggtgatctgcccaccttggcctcccagagtggtggta----aggcatgagccaccacacctggGCttttatggttatttcttgatgatatgctaagcaaggggtggattattcatgccttccatttttagatcatatagggtaacttcctgacgttgccatggcatttgtaagctgtcatggcactggtgggagtgtagcagtaaggacaaccaaaggtgacacgtgtggccaccatggttttggtggattttagccg i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290066 318 - 10531588 attttttttagtagagacatagtttcaccacattggccaggttggtctggaactcctgacctcaggtgatctacccaccttggcctcccagagtggtggta----aggcatgagccaccacacctgggcttttatggttatttcttgatgatatgctaagcaaggagtggattattcatgccttccatttttagatcatatagggtaacttcctgacgttgccatagcatttgtaagctgtcatggcactggtgggagtgtagcagtaaggacaaccaaaggtgatgcatgtggccatcttggttttggtggattttagccg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=1747043.000000 s hg38.chr16_GL383557v1_alt 56944 194 + 89672 gcttctttactgcaacctgtttcatcagcaaggtctttatgacctgtatcttgtgccgaccttctatctcattcagtgac--ataatggcttaactgtctgggaatgcagcccagtaggtctcagcctcattttacctagctcctattcaagatacatttgctttggttcaaatgcttctgacaATCATATTTATG s panTro5.chr16 21488444 196 - 81586097 gcttctttactgcaacctgttttatcagcaaggtctttatgacctgtatcttgtgccgaccttctatctcattcagtgacttataatggcttaactgtctgggaatgcagcccagtaggtctcagcctcattttacctagctcctattcaagatacatttgctttggttcaaatgcttctgacaATCATATTTATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550435 196 - 90481686 gcttctttactgcaacctgttttatcagcaaggtctttatgacctgtatcttgtgccgaccttctatctcattcagtgacttataatggcttaactgtctgggaatgcagcccagtaggtctcagcctcattttacctagctcctattcaagatacatttgctttggttcaaatgcttctgacaATCATATTTATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 782828 196 + 3010529 gcttctttactgcaacctgttttatcagcaaggtctttatgacctgtatcttgtgccgacctcctatctcattcagtgacttataatggcttaactgtctgggaatgcagcccagtaggtctcagcctcattttacctagctcctattcaagatacatttgctttggttcaaatgcttctgacaATCATATTTATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894649 196 + 163208435 gcttctttactgcaaactgttttatcagcaaggtctttatgacctgtatcttgtgctgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcaggccagtaggtctcagcctcattttacctagctcctattcaagatacatttgctttggttcaaatgcttctgacaATCATATTTATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368515 196 - 74971481 gcttctttactgcaacctgttttatcaggaaggtctttatgacctgtatcttgtgccgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcagcccagtaggtctcagcgtcattttacctagctcctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080514 196 - 78541002 gcttctttactgcaacctgttttatcaggaaggtctttatgacctgtatcttgtgccgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcagcccagtaggtctcagcgtcattttacctagctcctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474206 196 + 26466322 gcttctttactgcaacctgttttatcaggaaggtctttatgacctgtatcttgtgccgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcagcccagtaggtctcagcgtcattttacctagctcctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802070 196 + 43916225 gcttctttactgcaacctgttttatcaggaaggtctttatgacctgtatcttgtgccgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcagcccagtaggtctcagcgtcattttacctagctcctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232264 196 + 75399963 gcttctttactgcaacctgttttatcagcaaggtctttatgacctgtatcttgtgccgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcaccccagtaggtctcagcgtcgttttaaccagctcctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i chlSab2.chr5 I 4673 C 0 s manLeu1.NW_012101698v1 6792659 196 - 7209941 gcttctttactgcaacctgttttatcaggaaggtctttatgacctgtatcctgtgccgacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcagcccagtaggtctcagcatcattttacctagctgctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 534814 196 + 3907144 gcttctttactgcaacctgttttatcaggaaggtctttatgacctgcatcttgtgccaacctcctatctcattcagtgacttagaatggcttaactgtctgggaatgcagcccagtaggtctcagcatccttttacctagctcctattcaagacgcatttgctttggttcaaatgcttctgacaATCATATTTATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538145 185 - 44557958 tcttctttactgcaacctgttttatcagcaagatctttatgacctgtat-----------ctccaatctcattctgtgacttagaatgccttaaccatctgggaatgcagcccagtaggtctcagcctcattttacctagctcatattcaagatgcatttgctttggttcaaatgcttccgacaATCATATTTATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350227 191 + 6628207 gcttctttactgcaacctgttttatcagcaaggtctttatgacctgtatc-tgtgtggacctccaatctcattctgtgacttagaatgccttaaccatctgggaatgcagcccagtaagtctcagcctcattttatctagctcatattcaagatgcatttgctttggttcaaatgcttctga----caTATTTATG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290384 196 - 10531588 gcttctttactgcaacctgttttatcagcaaggtctttatgacctgtatcttgtgtggacctccaatctcattctgtgacttagaatgccttaaccatctgggaatgcagcccagtaggtctcagcctcattttaccttgctcatattcaagatgcatttgctttggttcaaatgcttctgaAAATCATATTCATG i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e dasNov3.JH569970 928427 0 + 1009443 C e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=371438.000000 s hg38.chr16_GL383557v1_alt 57138 39 + 89672 ATTAGGGTCCTATAACT--GAGATAGTGGGGGAATAAGCTG s panTro5.chr16 21488640 39 - 81586097 ATTAGGTTCCTATAACT--GAGATAGTGGGGGAATAAGCTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550631 39 - 90481686 ATTAGGTTCCTATAACT--GAGATAGTGGGGGAATAAGCTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783024 39 + 3010529 ATTAGGTTCCTATAACT--GAGATAGTGGGGGAATAAGCTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894845 39 + 163208435 ATTGGGTACCTATAACT--GAGATAGTAGGGGAATAAGCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368711 39 - 74971481 CTTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080710 39 - 78541002 CTTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474402 39 + 26466322 CTTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802266 39 + 43916225 ATTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232460 39 + 75399963 ATTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792855 39 - 7209941 ATTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535010 39 + 3907144 ATTGGGTTCCTACAACT--GAGATAGTGGGGGAACAAGCTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538330 39 - 44557958 GTTGGGTTCCTATAACT--GAGACAGTGGGGGAATAAGCTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350418 39 + 6628207 ATTGGGTTCCTATAACT--GAGACAGTGAGGGAATAAGCTG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290580 39 - 10531588 ATTGGGTTCCTATAACT--GAGACAGTGGGGGAATAAGCTG i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 928427 41 + 1009443 ATTGGGTCCCTATGATCAAGAAACAGTGGGGGAATAACCAT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936778 82 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945783 135 + 9850184 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=538669.000000 s hg38.chr16_GL383557v1_alt 57177 44 + 89672 AAGAATGCCACCTTGGCCTCTAACAAATCAATGTGTGACTATGG s panTro5.chr16 21488679 44 - 81586097 AAGaatgccaccttggcctctaacaaatcaatgtgtgactatgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550670 44 - 90481686 AAGAATGCCACCTTGGCCTCTAACAAATCAATGTGTGACTATGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783063 44 + 3010529 AAGaatgccaccttggcctctaacaaatcaatgtgtgactatgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894884 44 + 163208435 AAGaatgccactttggcctctaacaaatcactgtgtgactatgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368750 44 - 74971481 AAGaatgccaccttggcctctaacaaatcactgtgtgactatgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080749 44 - 78541002 AAGaatgccaccttggcctctaacaaatcactgtgtgactatgg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474441 44 + 26466322 AAGaatgccaccttggcctctaacaaatcactgtgtgactatgg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802305 44 + 43916225 AAGaatgccaccttggcctctaacaaatcactgtgtgactatgg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232499 44 + 75399963 AAGAATGCCACCTTGGCCTCTAACAAATCACTGCGTGACTATGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792894 44 - 7209941 AAGaatgccaccttggcctctaacaaatcactgtgtgactatgg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535049 44 + 3907144 AAGAATGCTACCTTGGCCTCTAACAAATCACTGTGTGACTATGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538369 44 - 44557958 AAGAATGCTGCTATGACCTCTAAGAAATCACTGTGTGACCATGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350457 44 + 6628207 AAGAATGCTGCCATGACCTCTAACAAATCACTGTGTGATCATGG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290619 44 - 10531588 AAGAATGCTGCCATGACCTCTAACAAATCACTCTGTGACCATGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54936860 44 + 72247402 AAGAATGCTGCCTTGGCCTCTAACAAATCACCGTGTGACCATGG i micMur3.chr20 I 82 C 0 s proCoq1.NW_012152729v1 2945918 44 + 9850184 AAGAATGCTGCCTTGGCCTCTAACAAATCACTGTGTGACCATGG i proCoq1.NW_012152729v1 I 135 I 218 s dasNov3.JH569970 928468 43 + 1009443 AAGAATGCTGCCTTGGCCTCTAA-AATTCACCATCTGACCACTA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e mm10.chr8 22472082 3626 - 129401213 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=61008.000000 s hg38.chr16_GL383557v1_alt 57221 5 + 89672 GAAAA s panTro5.chr16 21488723 5 - 81586097 gaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550714 5 - 90481686 GAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783107 5 + 3010529 gaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894928 5 + 163208435 gaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368794 5 - 74971481 gaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080793 5 - 78541002 gaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474485 5 + 26466322 gaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802349 5 + 43916225 gaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232543 5 + 75399963 GAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792938 5 - 7209941 gaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535093 5 + 3907144 GAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538413 5 - 44557958 GAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350501 5 + 6628207 GAAAA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290663 5 - 10531588 GAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54936904 5 + 72247402 AAAAA i micMur3.chr20 C 0 I 509 s dasNov3.JH569970 928511 5 + 1009443 GAAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=103067.000000 s hg38.chr16_GL383557v1_alt 57226 11 + 89672 ATTACCTCTTC s panTro5.chr16 21488728 11 - 81586097 attacctctac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550719 11 - 90481686 ATTACCTCTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783112 11 + 3010529 attacctcttc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894933 11 + 163208435 attacctcttc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368799 11 - 74971481 attacctcttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080798 11 - 78541002 attacctcttc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474490 11 + 26466322 attacctcttc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802354 11 + 43916225 attacctcttc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232548 11 + 75399963 ATTACCTCTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792943 11 - 7209941 attacctcttc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535098 11 + 3907144 ATTACCTCTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538418 11 - 44557958 ATTTCCTCTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350506 11 + 6628207 ACTTCCTCTTG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290668 11 - 10531588 ATTTCCTCTTC i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 928516 11 + 1009443 ATCACCTCTTC i dasNov3.JH569970 C 0 I 21 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=333696.000000 s hg38.chr16_GL383557v1_alt 57237 40 + 89672 CCTTCTTGATCTCCCATTTCCAAGACTGTAAAAATGAGAA s panTro5.chr16 21488739 40 - 81586097 ccttcttgatctcccatttccaagactgtaaaaatgagAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550730 40 - 90481686 CCTTCTTGATCTCCCATTTCCAAGACTGTAAAAATGAGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783123 40 + 3010529 ccttcttgatctcccatttccacgactgtaaaaatgagAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894944 40 + 163208435 ccttcttggtctcccatttccacgactgtaaaaatgagAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368810 40 - 74971481 ccttcttggtctcccatttccacaactataaaaatgagAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080809 40 - 78541002 ccttcttggtctcccatttccacaactataaaaatgagat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474501 40 + 26466322 ccttcttggtctcccatttccacaactataaaaatgagAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802365 40 + 43916225 ccttcttggtctcccatttccacgactataaaaatgagAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232559 40 + 75399963 CCTTCTTGGTCTCCCATTTCCACGACTATAAAAATGAGAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792954 40 - 7209941 ccttcttggtctcccatttccacgactataaaaatgagat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535109 40 + 3907144 CCTTCCTGGTCTCCCATTTCCACGACTATAAAAATGAGAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538429 40 - 44557958 CCTTATTGGTGTCCCATTTCCATGACTATAAAAATGAGAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350517 40 + 6628207 CCTTATTGGTGTTCCATTTCCATGACTATGAAAATGAGAC i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9290679 40 - 10531588 CCTTATTGGTGTCCCATTTCCATGACTATAAAAATCAGAC i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e dasNov3.JH569970 928527 21 + 1009443 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13711895 351 + 13852661 I a score=1486312.000000 s hg38.chr16_GL383557v1_alt 57277 178 + 89672 Tggccgggtacggtggcttacacatgaaatcccagcaccttgggaggccgaggtgggcagat------caccaggtcaggggattgagaccatcctg-gccaa---catgctgaaaacccgtctctactaaaatacaaaaaattagccgggcgtggtggcgggcacctgcagtcccagctacttggga s panTro5.chr16 21488779 178 - 81586097 Tggccaggtgcggtggcttacacatgaaatcccagcaccttgggaggccgaggtgggcagat------caccaggtcaggggattgagaccatcctg-gccaa---catgctgaaaccccgtctctactaaaatacaaaaaattagccaggcgtggtggcgggcacctgcagtcccagctactcggga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550770 178 - 90481686 Tggccgggtgcggtggcttacacatgaaatcccagcaccttgggaggccgaggtgggcagat------caccaggtcaggggattgagaccatcctg-gccaa---catggtgaaaccccgtctctactaaaatacaaaaagttagccaggcgtggtggcgggcacctgcagtcccagctactcggga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783163 178 + 3010529 Tggccgggtgcggtggcttacacatgaaatcccagcaccttgggaggccgaggtgggcagat------cactaggtcaggggattgagaccatcctg-gccaa---catgctgaaaccccgtctctactaaaatacaaaaaattagctgggcatggtggtgggcacctgcagtcccagctactcggga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53894984 178 + 163208435 Tggccgggtgcggtggcttacacatgaaatcccagcaccttgggaggccaaggtgggtggat------cactaggtcaggggattgagaccatcctg-gccaa---catgatgaaaccccgcctctactaaaatacaaaaaattagccgggcatggtggccggcacctgtagccccagctactcggaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21368850 178 - 74971481 Tggttggtcatggtggctcacacctggaatcccagcaccttgggaggccgaggtgggtggat------cactagatcaggggatcgagaccatcccg-gccaa---catggtgaaaccctgtctctactaaaatacaaaaaattagccgggcacggtggcaggtgcctgtagtcccagctactcggga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21080849 178 - 78541002 tggttggtcatggtggctcacacctggaatcccagcaccttgggaggccgaggtgggtggat------cactagatcaggggatcgagaccatcctg-gccaa---catggtgaaaccctgtctctactaaaatacaaaaaattagccaggcacggtggcaggtgcctgtagtcccagctactcggga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474541 178 + 26466322 Tggttggtcacggtggctcacacctggaatcccagcaccttgggaggccgaggtgggtggat------cactagatcaggggatcgagaccatcctg-gccaa---catggtgaaaccctgtctctactaaaatacaaaaaattagccgggcacggtggcaggtgcctgtagtcccagctactcggga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802405 178 + 43916225 Tggctggtcatggtggctcacacctggaatcccagcaccttgggaggccgaggtgggtggat------cactagatcaggggatcgagaccatcctg-gccaa---catggtgaaaccctgtctctactaaaatacaaaaaattagccgggcacggtggcaggtgcctgtagtcccagctacttggga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232599 178 + 75399963 Tggctggtcatggtggctcacacctggaatcccagcaccttgggaggccgaggtgggtggat------cactaggtcaggggatcgagaccatactg-gccaa---cagggtgaaaccctgtctctactaaaatacaaaaaattagccgggcatggtggcaggcgcctatagtcccagctacttgaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6792994 168 - 7209941 tggCT----------gctcacacctggaatcccagcaccttgggaggccgaggtgggtggat------cactagatcaggggatcgagaccatcctg-accaa---catggtgaaaccctgtctctactaaaatacaaaaaattagccgggcacggtggcaggtgcctgtagtcccagctacttggga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535149 161 + 3907144 Tggctggtcatggtggctcacacctggaatcccagcaccttgggaggccgaggtg-----------------------ggggatcgagaccatcctg-gccaa---catggtgaaaccctgtctctactaaaatacaaaaaattagccgggcgtggtggcaggcacctgtactcccagctacttggga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538469 178 - 44557958 Tggctagacatggtggctcacacctgtaatcctagcactttgggaggccgaggcaggaggat------cacgaggtcaagagattgagaccatcctg-gccaa---catggtgaaactccatctctgctaaaatacaaaaaattagctgggcgtggtggtatgagcctgtaatcccagctactcagga i calJac3.chr20 C 0 I 282 s saiBol1.JH378225 6350557 157 + 6628207 Tggctagacgtggtggctcacacctgtaatcacagcactttgggaggccgaggcaggaggat------cacgaggtcaggagattgagaccatcctg-gccaa---catggtgaaactctgtctttgctaaaatacaaaaact---------------------acctgtaatcccagctattcagga i saiBol1.JH378225 C 0 I 2 s aotNan1.NW_018500622v1 9290719 178 - 10531588 Tggctagatgtggtggctcacacctgtaatcctagcactttgggaggccgaggcaggaggat------cacaaggtcaggagattgagaccatcctg-gccaa---catggtgaaactccatctctgctaaaatacaaaaaattagctgggcatggtggtgtgagcctgtaatatcagctactcagga i aotNan1.NW_018500622v1 C 0 I 2 s otoGar3.GL873566 13712246 175 + 13852661 tagcTTggccctgtggcccatgcctgtaatcctagccctctgggaggcccaggtggatggattgattgcctgagctcaccagttcgagaccagcatgagccagagccaaagcaagaccttgtctct------------aaaagtagccaggtgttgtggcagg-gcctatagtcccagctatttggga i otoGar3.GL873566 I 351 I 2 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e dasNov3.JH569970 928527 21 + 1009443 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I a score=881211.000000 s hg38.chr16_GL383557v1_alt 57455 132 + 89672 ctgaggcaggggaatcgcttgaatctagaaggcgaatgttgcagtgagccgagatcgca-ccactgcactccagcctggtgacagagcaaga--ctgtctcaaaaaaaaaaaaaaaa------gaa-gaaaaaaaaaggaaa s panTro5.chr16 21488957 131 - 81586097 ctgaggcaggggaatcgcttgaatctagaaggcgaatgttgcagtgagccgagatcgca-ccactgcactccagcctggtgacagagcaaga--ctgtctcaaaaaaaaaaaaaaa-------gaa-gaaaaaaaaaggaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21550948 128 - 90481686 ctgaggcaggggaatcgcttgaatctagaaggcgaatgttgcagtaagccgagatcgca-ccactgcactccagcctggtgacagagcaaga--ctgtct---acaaaaaaaaaaa-------gaa-gaaaaaaaaggaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783341 138 + 3010529 ctgaggcaggggaatcgcttgaatctaaaaggcgaatgttgcagtgagccgagatcaca-ccactgcactccagcctggtgacagagcaaga--ctgtctcaaaaaaaaaaaaaaaaaaaaagaaa-gaaaaaaaaaggaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895162 128 + 163208435 ctgaggcaggggaatcgcttgaacccagaaggcggatgttgcagtgagccgagattgca-ccactgcactccagcctggtgacagagcgaga--ctgtctcaaaaaaaaaaagaa--------gaa-gaaaaaaa--ggaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369028 124 - 74971481 ctgaggcaggggaatcgcttgaacccagaaggcggacgttgcagtgagccgagatcaca-ccact--------gcctggtgacaaagtgagactctgtctcaaaaaaaaacaaga--------gag-aaaaaaaaaagaaAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081027 124 - 78541002 ctgaggcaggggaatcgcttgaacccagaaggcggacgttgcagtgagccgagatcaca-ccact--------gcctggtgacaaagtgagactctgtctcaaaaaaaaacaaga--------gag-aaaaaaaaaagaaAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474719 124 + 26466322 ctgaggcaggggaatcgcttgaacccagaaggcggacgttgcagtgagccgagatcaca-ccact--------gcctggtgacaaagtgagactctgtctcaaaaaaaaacaaga--------gag-aaaaaaaaaagaaAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802583 123 + 43916225 ctgaggcaggggaatcgcttgaacctagaaggcggacgttgcagtgagccgagatcaca-ccact--------gcctggtgacaaagtgagactctgtctcaaaaaaaaaagaga--------ga--aaaaaaaaaagaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232777 123 + 75399963 ctgaggcaggggaatcgcttgaacccagaaggcggacgttgcagtgagccgagatcaca-ccact--------gcctggtgacaaagtgagactctgtctc-aaaaaaaacaaga--------gag-aaaaaaaaaagaaaA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793162 125 - 7209941 ctgaggcaggggaatcgcttgaacccagaaggcggacgttgcagtgagccgagatcaca-ccact--------gcctggtgacaaagtgagactctgtctcaaaaaaaaacaaga--------gagaaaaaaaaaaaGAAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535310 113 + 3907144 ctgaggcaggggaatcgcttgaacccagaaggcggacgttgcagtgagccaagatcaca-ccact--------gcctggtgacaaagtgagactctgtctcaaaaaa--------------------aaaacaagagaaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21538929 130 - 44557958 ttgaggcaggagaatcgcttgaaccttggaggtggaagttgcagtgaaccgtgattgca-ccactgtactccagcctggttacagagtgagactctgtct--aaaaaaaaaataa--------taa-taaagaaagaaagaa i calJac3.chr20 I 282 C 0 s saiBol1.JH378225 6350716 129 + 6628207 ctgaggcaggagaatcgattgaacctgggaggtggaggttgcagtgagccgtgattgcg-ccactgtactccagcctggttacagagtgagactctgcct---aaaaaattataa--------taa-taaagaaagaaagaa i saiBol1.JH378225 I 2 C 0 s aotNan1.NW_018500622v1 9290899 121 - 10531588 ctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccatgatcacg-ccactgtactccagcctggttacagaacgagactctgtct--aaaaaaaac------------------aagaaagaaagaa i aotNan1.NW_018500622v1 I 2 C 0 s otoGar3.GL873566 13712423 124 + 13852661 ctaaggcgagaggatcgcttgagcctaagatttg-aggttgctgtgagctgtgatgtcaggcact------ctacccag--acagaatgagactgtgtctcaaaacaaagaaaaT--------ACT-AACCAACCAATAAAA i otoGar3.GL873566 I 2 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e dasNov3.JH569970 928527 21 + 1009443 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I a score=48328.000000 s hg38.chr16_GL383557v1_alt 57587 5 + 89672 aaaaa s panTro5.chr16 21489088 5 - 81586097 aaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551076 3 - 90481686 aAA-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783479 5 + 3010529 aaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895290 5 + 163208435 AACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369152 5 - 74971481 AAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081151 5 - 78541002 AAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474843 5 + 26466322 AAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802706 5 + 43916225 aaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232900 5 + 75399963 AAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793287 5 - 7209941 AAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535423 5 + 3907144 aaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539059 5 - 44557958 aaaAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350845 5 + 6628207 aaaaa i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9291020 5 - 10531588 aaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13712547 5 + 13852661 AAAAA i otoGar3.GL873566 C 0 I 490 s dasNov3.JH569970 928548 5 + 1009443 AAAAA i dasNov3.JH569970 I 21 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I a score=291859.000000 s hg38.chr16_GL383557v1_alt 57592 35 + 89672 TGAGACTGAGAGTCACGTTTCTTTTACAAACTCCT s panTro5.chr16 21489093 32 - 81586097 ---gaCTGAGACTCACGTTTCTTTTACAAACTCCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551079 32 - 90481686 ---GACTGAGAGTCACGTTTCTTTTACAAACTCCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783484 35 + 3010529 TGAGACTGAGAGTCACGTTTCTTTTACAAACTCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895295 35 + 163208435 TGAGACTGAGAGTCACATTTCTTTTACAAACTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369157 35 - 74971481 TGAGACTGAGAGTCACATTTATTTTACAAACTCCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081156 35 - 78541002 TGAGACTGAGAGTCACATTTATTTTACAAactcct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474848 35 + 26466322 TGAGACTGAGAGTCACATTTATTTTACAAACTCCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802711 35 + 43916225 TGAGACTGAGAGTCACATTTATTTTACAAACTCCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232905 35 + 75399963 TGAGACTGAGAATCACATTTATTTTACAAACTCCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793292 35 - 7209941 TGAGACTGAGAGTCACATTTATTTTACAAACTCCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535428 35 + 3907144 TGAGACTGAGAGTCACATTTCTTTTACAAACTCCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539064 34 - 44557958 TGAGACCAAGAGTCAC-CATCTTTTACAAACTCCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350850 34 + 6628207 TGAGACCAAGAGTCAC-TATCTTTTACAAACTCCT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9291025 34 - 10531588 TGAGACCAAGAGTCAC-TATCTTTTACAAACTCCT i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 928553 34 + 1009443 TGAGGTCAAGAGTCAC-CAGTTTTTATATACCTCA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e cebCap1.NW_016107433v1 3330067 2791 - 5917169 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=899008.000000 s hg38.chr16_GL383557v1_alt 57627 85 + 89672 GCTTCATCTCCACCC-----------AATAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCGGTATTAAGTACCATTTAAAGAAA-GG s panTro5.chr16 21489125 85 - 81586097 GCTTCATCTCCACCC-----------AATAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCGGTATTAAGTACCATTTAAAGAAA-GG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551111 85 - 90481686 GCTTCATCTCCACCC-----------AATAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCGGTATTAAGTACCATTTAAAGAAA-GG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783519 85 + 3010529 GCTTCATCTCCACCC-----------AGTAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCGGTATTAAGTACCATTTAAAGAAA-GG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895330 85 + 163208435 GCTTTATCTCCACCC-----------AATAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTACCATTTAAAGAAA-GG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369192 86 - 74971481 GCTTCATCACCACCC-----------AGTAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTAGCATTTAAAGAAATGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081191 86 - 78541002 gcttcatcaccaccc-----------agtaggaataacttcatttttatctacagcatacattgtggttcagtattaagtagcatttaaagaaatga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474883 86 + 26466322 GCTTCATCACCACCC-----------AGTAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTAGCATTTAAAGAAATGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802746 86 + 43916225 GCTTCATCACCACCC-----------AGTAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTAGCATTTAAAGAAATGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58232940 86 + 75399963 GCTTCATCACCACCC-----------AGTAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTAGCATTTAAAGAAATGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793327 86 - 7209941 GCTTCATCACCACCC-----------AGTAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTAGCATTTAAAGAAATGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535463 86 + 3907144 GCTTCATCTTCACCC-----------AATAGGAATAACTTCATTTTTATCTACAGCATACATTGTGGTTCAGTATTAAGTAGCATTTAAAGAAATGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539098 85 - 44557958 GCTTcatctccaccc-----------aataggaacaacttcatttttatctacagcatacactgtggttcagcattaagtaccatttaaagaaa-gg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350884 85 + 6628207 GCTTCATCTCCACCC-----------AATAGGAACAACTGCATTTTTATCTACAGCATACACTGTGGTTCAGCATTAAGTATCATTTAAAGAAA-GG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3332858 85 - 5917169 GCTTCATCTCCACCC-----------AACAGGAACAACTTCATTTTTATCTACAGCATACACTGTGGTTCAGCATTAAGTACCATTTAAAGAAA-GG i cebCap1.NW_016107433v1 I 2791 C 0 s aotNan1.NW_018500622v1 9291059 85 - 10531588 GCTTCATCTCCACCC-----------AATAGGAACAACTTCATTTTTATCTACAGCATACACTGTGGTTCAACATTAAGTACCATTTAAAGAAA-GG i aotNan1.NW_018500622v1 C 0 I 32 s dasNov3.JH569970 928587 96 + 1009443 GCTGCCTCTCCTCCCTATCCCCAAAGAGccagaagaactctatttttacctatgttgcatattgtggttcagattaaggctccactttaagaaa-gt i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e micMur3.chr20 54936909 509 + 72247402 I e mm10.chr8 22472082 3626 - 129401213 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=105544.000000 s hg38.chr16_GL383557v1_alt 57712 9 + 89672 -TTGATGCTC s panTro5.chr16 21489210 9 - 81586097 -TTGATGCTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551196 9 - 90481686 -TTGATGCTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783604 9 + 3010529 -TTGATGCTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895415 9 + 163208435 -TTGATGCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369278 9 - 74971481 -TTGATGCTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081277 9 - 78541002 -ttgatgctc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474969 9 + 26466322 -TTGATGCTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802832 9 + 43916225 -TTGATGCTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233026 9 + 75399963 -TTGATGCTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793413 9 - 7209941 -TTGATGCTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535549 9 + 3907144 -TTGATTTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539183 9 - 44557958 -ccgatgctc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350969 9 + 6628207 -CCAATGCTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3332943 9 - 5917169 -CCGATGCTC i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54937418 9 + 72247402 -TTGATGCTC i micMur3.chr20 I 509 C 0 s mm10.chr8 22475708 9 - 129401213 -TTGATGCTA i mm10.chr8 I 3626 C 0 s dasNov3.JH569970 928683 10 + 1009443 tttgatgctt i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80470200 695 + 88915250 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=192562.000000 s hg38.chr16_GL383557v1_alt 57721 17 + 89672 ----AAAAGAAAGCCTAAAAA- s panTro5.chr16 21489219 17 - 81586097 ----AAAAGAAAGCCTAACAC- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551205 17 - 90481686 ----AAAAGAAAGCCTAAAAC- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783613 17 + 3010529 ----AAAAGAAAGCCTAAAAA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895424 17 + 163208435 ----AAAAGAAAGCTTAAACA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369287 17 - 74971481 ----AAAAGAAAGCTTAAAAA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081286 17 - 78541002 ----aaaagaaagcttaaaaa- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474978 17 + 26466322 ----AAAAGAAAGCTTAAAAA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802841 17 + 43916225 ----AAAAGAAAGCTTAAAAA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233035 17 + 75399963 ----AAAAGAAAGCTTAAATA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793422 17 - 7209941 ----AAAAGAAAGCTTAAAAA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535558 17 + 3907144 ----AAAAGAAAACTTAAAAA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539192 17 - 44557958 ----aaaagaaagcttaaaaa- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350978 17 + 6628207 ----AAAAGCAAGCTTAAAAA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3332952 17 - 5917169 ----AAAAGCAAGCTTAAAAA- i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54937427 17 + 72247402 ----AAAAGAAAGCTTAAAAA- i micMur3.chr20 C 0 I 1850 s mm10.chr8 22475717 12 - 129401213 ----AAAAGTAAGCTT------ i mm10.chr8 C 0 C 0 s canFam3.chr5 80470895 17 + 88915250 ----aaaaaAAAACTTAAAAA- i canFam3.chr5 I 695 I 3 s dasNov3.JH569970 928693 22 + 1009443 aaaaaaaacaaaacttgaaaaA i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=161838.000000 s hg38.chr16_GL383557v1_alt 57738 22 + 89672 CCCCC-AAATTTGAT----GGTCTCTA--------- s panTro5.chr16 21489236 22 - 81586097 CCCCC-AAATTTGAT----GGTCTCTA--------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551222 22 - 90481686 CCCCC-AAATTTGAT----GGTCTCTA--------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783630 22 + 3010529 CCCCC-AAATTTGAT----GGTCTCTA--------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895441 22 + 163208435 CCCCC-AAATTTGAT----GGTCTCTA--------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369304 22 - 74971481 CCCCC-AAATTTGAT----GTTCTCTA--------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081303 22 - 78541002 ccCCC-AAATTTGAT----GGTCTCTA--------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14474995 22 + 26466322 CCCCC-AAATTTGAT----GGTCTCTA--------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802858 22 + 43916225 CCCCC-AAATTCGAT----GGTCTCTA--------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233052 22 + 75399963 CCCCC-AAATTTGAT----GGTCTCTA--------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793439 22 - 7209941 CCCCC-AAATTTGAT----GGTCTCTA--------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535575 22 + 3907144 CCCCC-AAATTTGAT----GGTCTCTA--------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539209 23 - 44557958 ccTTCAAAATTTGAT----GGTCTGTA--------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6350995 22 + 6628207 CCTTCAAAATTTGAT----GG-CTGTA--------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3332969 22 - 5917169 CCTTCAAAATTTGAT----GG-CTGTA--------- i cebCap1.NW_016107433v1 C 0 C 0 s mm10.chr8 22475729 16 - 129401213 -CCTA-AAACCT---------TTTCGA--------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80470915 26 + 88915250 CTCCC-AAACACCAGGTTAGGTCTCTT--------- i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 928715 31 + 1009443 TCACC-AAACTAGAT----GATCTTTATCTTTTCTA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54937444 1850 + 72247402 I e proCoq1.NW_012152729v1 2945962 218 + 9850184 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=889413.000000 s hg38.chr16_GL383557v1_alt 57760 78 + 89672 TCTTCCAATATTCCAAGATTTTAGTTCTTCTT-AGTTGAA--TTTGCTATACTCTCCACGGTACAT-G-TG-AATTATCCATTC s panTro5.chr16 21489258 78 - 81586097 TCTTCCAATATTCCAAGATTTTAGTTCTTCTT-AGTTGAA--TTTGCTATACTCTCCACGGTACAT-G-GG-AATTATCCATTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551244 78 - 90481686 TCTTCCAATATTCCAAGATTTTAGTTCTTCTT-AGTTGAA--TTTGCTATACTCTCCACGGTACAT-G-GG-AATTATCCATTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783652 78 + 3010529 TGTTCCAATATTCCAAGATTTTAGTTCTTCTT-AGTTGAA--TTTGCTATACTCTCCACAGTACAT-G-TG-AATTATCCATTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895463 78 + 163208435 TCTTCCAATATTCCAAGATTTTAGTTCTTCTT-AGTTGAA--TTTGCTATACTCTCCACGGTACAT-G-TG-AATTATCCATTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369326 78 - 74971481 TCTTCTAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCTCTACAGTACAT-G-TG-AATTATCCATTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081325 78 - 78541002 TCTTCTAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCTCTACAGTACAT-G-TG-AATTATCCATTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475017 78 + 26466322 TCTTCTAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCTCTACAGTACAT-G-TG-AATTATCCATTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802880 78 + 43916225 TCTTCTAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCTCCACAGTACAT-G-TG-AATTATCCATTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233074 78 + 75399963 TCTTCTAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCTCCACAGTACAT-G-TG-AATTATCCATTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793461 78 - 7209941 TCTTCTAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCTCCACAGGACAT-G-TG-AATTATCCATTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535597 78 + 3907144 TCTTCCAATATTCCAAGATTTTAGTTTTTCTT-AGTTGAA--TTTGCTATACTCCCCACAATACAT-G-TG-AATTATCCATTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539232 78 - 44557958 TCTTCCAATATTCCAAGATTTTAGTTTTTCTT-AGTCGAA--TTTGCTGTACTCTCCACAGTACAT-G-TG-AATTATCCATTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351017 80 + 6628207 TCTTCCAATATTCTAAGATTTTAGTTTTTCTTAAGTCGAA--TTTGCTATACTCTCCACAGTACAT-G-TGAAATTATCCATTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3332991 78 - 5917169 TCTTCCAATATTCTAAGATTTTAGTTTTTCTT-AGTCGAA--TTTGCTGTACTCTCCACAGTACAT-G-TG-AATTATCCATTC i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2946180 78 + 9850184 TCTTCCAATATTCTAAGATTTTAGTTCTTTTC-AGTCTAA--TTAGCTATACTATCCACAGTAAAG-G-TG-AATTATCCATTC i proCoq1.NW_012152729v1 I 218 I 1366 s mm10.chr8 22475745 57 - 129401213 ACTTGCAGTATTCCAAGTTTTTA----TTCTT-AGTCTAAGTTTTGTTA---TTTCCATGGCAAA------------------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80470941 75 + 88915250 GCTTCCAATATTCCAAGATTTTAGTTTCTCTC-----TAA--TTTGTTGTAATCTCCAGGGTAGAGAG-TA-CATTATCCATTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 928746 77 + 1009443 TCTTCCAACATTCCAAGATGTTAGT--GTCTC-AGTCTAA--TTTGCTATACTCTTCATGGTGAAA-GACA-AACTATATATGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54937444 1850 + 72247402 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=384419.000000 s hg38.chr16_GL383557v1_alt 57838 35 + 89672 AGAGATTAGTTTACTAACCAGTACATGAGAAGAGT s panTro5.chr16 21489336 35 - 81586097 AGAGATTAGTTTACTAACCAGTACCTGAGAAGAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551322 35 - 90481686 AGAGATTAGTTTACTAACCAGTACCTGAGAAGAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783730 35 + 3010529 AGAGATTAGTTTACTAACCAGTACATGAGAACAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895541 35 + 163208435 AGAGATTAGTTTACTAACCAGTACATGAGAAAAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369404 35 - 74971481 AGAGATGAGTTTACTAACCAGTACATGAAAAAAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081403 35 - 78541002 AGAGATGAGTTTACTAACCAGTACATGAAAAAAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475095 35 + 26466322 AGAGATGAGTTTACTAACCAGTACATGAAAAAAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802958 35 + 43916225 AGAGATGAGTTTACTAACCAGTACATGAGAAAAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233152 35 + 75399963 AGAGATGAGTTTACTAACCAGTACATGAGAAAAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793539 35 - 7209941 AGAGATGAGTTTACTAACCAGTACATGAGAAAAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535675 35 + 3907144 AGAGATGAGTTTACTAACCAGTACATGAGAAAAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539310 35 - 44557958 AGAGATTCGTTTACTAACTCGTATAAGAGAAAAGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351097 35 + 6628207 AGAGATTAGTTTACTAACTAGTATATGAGAAAAGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333069 35 - 5917169 AGAGATTAGTTTACTAACTAGTATATGAGAAAAGC i cebCap1.NW_016107433v1 C 0 C 0 s mm10.chr8 22475802 34 - 129401213 -GAGATCGGATTGCCTGCCAGCATATGGGAGAAAT i mm10.chr8 C 0 C 0 s canFam3.chr5 80471016 35 + 88915250 AGAGATCAGATTATCAACTATTATATGAGAAAAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 928823 35 + 1009443 AGAGATCAGATTACTAATTACTATATGAGAAAAGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54937444 1850 + 72247402 I e proCoq1.NW_012152729v1 2946258 1366 + 9850184 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=19000.000000 s hg38.chr16_GL383557v1_alt 57873 1 + 89672 G s panTro5.chr16 21489371 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551357 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783765 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895576 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369439 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081438 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475130 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802993 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233187 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793574 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535710 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539345 1 - 44557958 G i calJac3.chr20 C 0 I 461 s saiBol1.JH378225 6351132 1 + 6628207 G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333104 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54939294 1 + 72247402 G i micMur3.chr20 I 1850 C 0 s proCoq1.NW_012152729v1 2947624 1 + 9850184 G i proCoq1.NW_012152729v1 I 1366 C 0 s mm10.chr8 22475836 1 - 129401213 G i mm10.chr8 C 0 C 0 s canFam3.chr5 80471051 1 + 88915250 G i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 928858 1 + 1009443 G i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=23120.000000 s hg38.chr16_GL383557v1_alt 57874 2 + 89672 AA s panTro5.chr16 21489372 2 - 81586097 AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551358 2 - 90481686 AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783766 2 + 3010529 AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895577 2 + 163208435 AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369440 2 - 74971481 AG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081439 2 - 78541002 AG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475131 2 + 26466322 AG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802994 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233188 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793575 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535711 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539807 2 - 44557958 AA i calJac3.chr20 I 461 C 0 s saiBol1.JH378225 6351133 2 + 6628207 AA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333105 2 - 5917169 AA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54939295 2 + 72247402 AA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2947625 2 + 9850184 AA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22475837 2 - 129401213 AG i mm10.chr8 C 0 C 0 s canFam3.chr5 80471052 2 + 88915250 AA i canFam3.chr5 C 0 I 190 s dasNov3.JH569970 928859 2 + 1009443 AA i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=1164195.000000 s hg38.chr16_GL383557v1_alt 57876 88 + 89672 TTT-TTAAAGCATTTGAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCGTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG s panTro5.chr16 21489374 88 - 81586097 TTT-TTAAAGCATTTGAGTCAG--A-TTGAC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551360 88 - 90481686 TTT-TTAAAGCATTTGAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783768 88 + 3010529 TTT-TTAAAGCATTTGAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895579 88 + 163208435 TTT-TTAAAGCATTTGAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTACAACCCAAGAATGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369442 89 - 74971481 TTT-TTAAAGCATTTGAGTCAG--A-TTGGCAAAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081441 89 - 78541002 TTT-TTAAAGCATTTGAGTCAG--A-TTGGCAAAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAATTCAGAATTTTTCTGTAGAACCCAAGAATGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475133 89 + 26466322 TTT-TTAAAGCATTTGAGTCAG--A-TTGGCAAAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20802996 89 + 43916225 TTT-TTAAAGCATTTGAGTCAG--A-TTGGCAAAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233190 88 + 75399963 TTT-CTAAAGCATTTGAGTCGG--A-TTGGC-AAAAAAG-----A-------------------------CCTCTCCTGGACTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793577 89 - 7209941 TTT-TTAAAGCATTTGAGTCAG--A-TTGGCAAAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATTAGAATTTTTCTGTAGGACCCAAGAATGAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535713 88 + 3907144 TTT-TTAAAGCATTTGAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCAGAATTTTTCTGTAGAACCCAAGAATGAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539809 88 - 44557958 TTT-TTAAAGCATTTAAGTCAG--A-TTGGC-TAAAAAG-----A-------------------------CCTTTCCTGGGCTTGTTTCATATCAAAATTTTTCAGTAGAACCCGGGAATGAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351135 88 + 6628207 TCT-TTAACGCATTTAAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCGTAATTTTTCTGTAGAACCCAGGAGTCAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333107 88 - 5917169 TTT-TTAAAGCATTTAAGTCAG--A-TTGGC-AAAAAAG-----A-------------------------CCTTTCCTGGGCTGGTTTCAAATCATAATTTTTCTGTAGAACCCAGGAGGGAG i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54939297 90 + 72247402 TTT-TTAAAGCATTTGAGTCTACCG-TAGGC-AAAAAAG-----A-------------------------CCTTCCCTAGGCTGGTTTCAAATAAAAAATTTTCCAGAGAACCCAAGAATGAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2947627 88 + 9850184 TTT-TTAAAGCAGTTAAGTCAG--G-TAGGC-AAAAAAG-----A-------------------------CCTTCCCTAGGCTGGTTTCAAATAAAAAATTTTCCATAGAACCCAAGAACGAG i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22475839 114 - 129401213 TTTATTAAGTCATTTGAGTAGT--G-TTGGC-aaaaaaa-----aaaaaaaaaaaaaaaaaaaaCCCAACCCACATCTAGGCCAGTCTCTGGTCCAAACTTCTCTGTAGAACTCAAGCAAGAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80471244 87 + 88915250 TTT-TTAAAGCACTTGAGTCAA--G-TTAGC-AAAAAAG-----C-------------------------CCTTTCCTAGG-TAGTCTCAGATCAAAATTTTTCTGTAGAATCCGAGTAGGAg i canFam3.chr5 I 190 I 142 s dasNov3.JH569970 928861 91 + 1009443 TTT-CTAAAGCATATGAGTCAG--GTTTAGC-AAAAAAATGGCCA-------------------------CCATTCCCAGGCTG---TCTCATCAAAATTTTTCTATAGAACCCAAGTAAGAA i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=195658.000000 s hg38.chr16_GL383557v1_alt 57964 20 + 89672 CAGAGGTATGCAAAATGGCC s panTro5.chr16 21489462 20 - 81586097 CAGAGGTATGCAAAATGGCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551448 20 - 90481686 CAGAGGTATGCAAAATGGCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783856 20 + 3010529 CAGAGGTATGCAAAATGGCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895667 20 + 163208435 CAGAGGTATGCAAAATGGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369531 20 - 74971481 CAGAGGTATACAAAATGGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081530 20 - 78541002 CAGAGGTATACAAAATGGTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475222 20 + 26466322 CAGAGGTATACAAAATGGTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803085 20 + 43916225 CAGAGGTATACAAAATGGTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233278 20 + 75399963 CAGAGGTATGCAAAATGGCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793666 20 - 7209941 CAGAGGTATACAAAATGGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535801 20 + 3907144 CAGAGGTATGCAAAATGGCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539897 20 - 44557958 CAGCGGTATGCAACATGGCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351223 20 + 6628207 CAGGCTTATGCAAAACGGCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333195 20 - 5917169 CAGGGGTATGCAAAATGGCC i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54939387 20 + 72247402 CAGGGGTTGGCAAAACGCCC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2947715 17 + 9850184 CA---GTTGGCAAAATGCCC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22475953 11 - 129401213 CAG-------CAAGCTGG-- i mm10.chr8 C 0 C 0 s dasNov3.JH569970 928952 20 + 1009443 CAGCCGTTTGCAAAATGCCC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80471331 142 + 88915250 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=182244.000000 s hg38.chr16_GL383557v1_alt 57984 15 + 89672 AAAACAGAAACA-TAA s panTro5.chr16 21489482 15 - 81586097 AAAACAGAAACA-TAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551468 15 - 90481686 AAAACAGAAACA-TAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783876 15 + 3010529 AAAACAGAAACA-TAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895687 15 + 163208435 AAAACAGAAACA-TAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369551 15 - 74971481 AAAATAGAAACA-TAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21081550 15 - 78541002 AAAATAGAAACA-TAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475242 15 + 26466322 AAAATAGAAACA-TAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803105 15 + 43916225 AAAATAGAAACA-TAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233298 15 + 75399963 AAAACAGAAACA-TAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793686 15 - 7209941 AAAACAGAAACA-TAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535821 15 + 3907144 AAAACAGAAACA-TAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539917 15 - 44557958 AAAACAGAAACA-TAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351243 15 + 6628207 AAAACTGAAACA-TAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333215 16 - 5917169 AAAACAGAAACATTAA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54939407 15 + 72247402 AAAACAGAAACA-TAA i micMur3.chr20 C 0 I 487 s proCoq1.NW_012152729v1 2947732 15 + 9850184 AAAACAGAAACA-TAA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22475964 6 - 129401213 --AGTCGA-------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80471473 15 + 88915250 aatataaaaaaa-aaA i canFam3.chr5 I 142 C 0 s dasNov3.JH569970 928972 15 + 1009443 AAAACAGAAACA-AAA i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=66160.000000 s hg38.chr16_GL383557v1_alt 57999 6 + 89672 CGCCAA s panTro5.chr16 21489497 6 - 81586097 CGCGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551483 6 - 90481686 CGCGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783891 6 + 3010529 CACCAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895702 6 + 163208435 GGCCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369566 6 - 74971481 TGCCAA i rheMac8.chr20 C 0 I 329 s macFas5.chr20 21081565 6 - 78541002 TGCCAA i macFas5.chr20 C 0 I 933 s macNem1.NW_012011355v1 14475257 6 + 26466322 TGCCAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803120 6 + 43916225 TGCCAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233313 6 + 75399963 TGCCAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793701 6 - 7209941 TGCCAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535836 6 + 3907144 TGCCAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539932 6 - 44557958 TGCCAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351258 6 + 6628207 TGCCAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333231 6 - 5917169 TGCCAA i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2947747 6 + 9850184 TGCCAA i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22475970 6 - 129401213 TGCCAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80471488 6 + 88915250 ATCCAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 928987 6 + 1009443 CCCCAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54939422 487 + 72247402 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=88831.000000 s hg38.chr16_GL383557v1_alt 58005 9 + 89672 GAGGGAAAC- s panTro5.chr16 21489503 9 - 81586097 GAGGGAAAC- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551489 9 - 90481686 GAGGGAAAC- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783897 9 + 3010529 GAGGGAAAC- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895708 9 + 163208435 GAGGGAAAA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369901 9 - 74971481 GAGGGAAAC- i rheMac8.chr20 I 329 C 0 s macFas5.chr20 21082504 9 - 78541002 GAGGGAAAC- i macFas5.chr20 I 933 C 0 s macNem1.NW_012011355v1 14475263 9 + 26466322 GAGGGAAAC- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803126 9 + 43916225 GAGGGAAAC- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233319 9 + 75399963 GAGGGAAAC- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793707 9 - 7209941 GAGGGAAAC- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535842 9 + 3907144 GAGGGAAAT- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539938 9 - 44557958 GAAGGAAAC- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351264 9 + 6628207 GAAGGAAAC- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333237 9 - 5917169 GAAGGAAAC- i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2947753 9 + 9850184 AAGCGAAAC- i proCoq1.NW_012152729v1 C 0 I 372 s mm10.chr8 22475976 7 - 129401213 --GAGGAAC- i mm10.chr8 C 0 C 0 s canFam3.chr5 80471494 9 + 88915250 GTAGGAACC- i canFam3.chr5 C 0 I 7 s dasNov3.JH569970 928993 3 + 1009443 -------ACT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54939422 487 + 72247402 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=956398.000000 s hg38.chr16_GL383557v1_alt 58014 139 + 89672 GTTTTAAATGTCTAG----------------------G-TTACACAAACCCCC-AAAGTAAAAACACCCTGAAACCCATGCACTAAAGCGTTCC-CCTTTTTTAATACTGGTttt-----ccttcccttccct-----tcccttcccctcacatcccctcccc-tcctctcccct s panTro5.chr16 21489512 134 - 81586097 GTTTTAAATGTCTAG----------------------G-TTACACAAACCCCC-AAAGTAAAAACACCCTGAAACCCATGCACTAAAGCGGTCC-CCTTTTTTAATACTGGTTTT-----ccttcccttccct-----tccc-----cttacatcccctcccc-tcctctcccct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551498 134 - 90481686 GTTTTAAATGTCTAG----------------------G-TTACACAAACCCCC-AAAGTAAAAACACCCTGAAACCCATGCACTAAAGCGGTCC-CCTTTTTTAATACTGGTTTT-----ccttcccttccct-----tccc-----cttacatcccctcccc-tcctctcccct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 783906 134 + 3010529 ATTTTAAATGTCTAG----------------------G-TTACACAAACCCCC-AAAGTAAAAACACCCTGAAACCCATGCACTAAAGCGGTCC-CCTTTTTTAATACTGGTttt-----ccttcccttccct-----tccc-----ctcacatcccctcacc-tcctctcccct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895717 128 + 163208435 GTTTTAAATATCTAG----------------------G-TTACAC-AACCCCC-CAAGTAAAAACACCCTGAAACCCATGCACTAAAGCGGTCC-CCTTTTTCAATACGGGT----------ttcccttccct-----tccc-----ctcacatcccctcccc-tcctctcccct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21369910 135 - 74971481 GTTTTAAATGTCTAG----------------------G-TTACACAAATCCCC-AAAGTAAAAACACCCTGAAACCCATGTACTAAAGCATTCCCCCTTTTTTAATACTGGTttt-----cctccccttccct-----tccc-----ctcacatcccctcccc-tcctctcccct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21082513 135 - 78541002 GTTTTAAATGTCTAG----------------------G-TTACACAAATCCCC-AAAGTAAAAACACCCTGAAACCCATGTACTAAAGCATTCCCCCTTTTTTAATACTGGTttt-----cctccccttccct-----tccc-----ctcacatcccctcccc-tcctctcccct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475272 135 + 26466322 GTTTTAAATGTCTAG----------------------G-TTACACAAATCCCC-AAAGTAAAAACACCCTGAAACCCATGTACTAAAGCATTCCCCCTTTTTTAATACTGGTttt-----cctccccttccct-----tccc-----ctcacatcccctcccc-tcctctcccct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803135 138 + 43916225 GTTTTAAATGTCTAG----------------------G-TTACACAAATCCCC-AAAGTAAAAACACCCTGAAACCCATGTACTAAAGCGTTCCCCCTTTTTTAATACTGGTttt-----cctccccttcccttcccctccc-----ctcacatcccctcccc-tcctctccc-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233328 135 + 75399963 GTTTTAAATGTCTAG----------------------G-TTACACAAATCCCC-AAAGTAAAAACACCCTGAAACCCATGCACTAAAGCGTTCCCCCTTTTTTAATACTGGTttt-----ccttcccttccct-----tccc-----ctcacatcccctcccc-tcctttcccct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793716 140 - 7209941 GTTTTAAATGTCTAG----------------------G-TTACACAAATCCCC-AAAGTAAAAACACCCTGAAACCCATGTACTAAAGCGTTCCCCCTTTTTTAATACTGGTtttcctccccttcccttcccc-----tccc-----ctcacatcccctcccc-tcctctcccct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535851 130 + 3907144 GTTTTAAATGTCTAG----------------------G-TAACACAAATCCCC-AAAGTAAAAACACCCTCAAAACCATGCACTAAAGCGTTCCTCCTTTTTTAATACTGGTTTT----------ccttccct-----tccc-----ctcacatcccctcccc-tcctctcccct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21539947 114 - 44557958 GTTTTAAACCTCTAG----------------------G-TTACACAAATCCTC-AAAGTAAAAACATCCTGAAACACACGCACTGAAGTGT---------------------TTG-----GTTtcccttccct-----tccc-----ctcacatccccttccc-tcctctcccct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351273 110 + 6628207 GTTTTAAACTTCTAG----------------------G-TTACACAAATCCTC-AAAGTAAAAACATCCTGAAACACACGCACTGAAGT-------------------------------GTTCCCCTTTCCC-----TTAT-----TCAATATTGGTTTCCCTTCCCTTCCCCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333246 135 - 5917169 TTTTTAAACCTCTAG----------------------G-TTACACAAATCCTC-AAAGTAAAAACATCCTGAAACACATGCACTGAAGTGTTCCCCTTTCCCTTATTCAATATTG-----GTTTCCCTTCCCT-----TCCC-----CTCACATCCCCTCCTC-TCCTCTCCCCT i cebCap1.NW_016107433v1 C 0 C 0 s mm10.chr8 22475983 74 - 129401213 GGCTCCAGCAGCTCT----------------------G-CTACACAAATACCC-ATAATG---------TGGGAAATATGCACCGAGATG-------TTATTTAACGCTGGTTT------------------------------------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80471510 125 + 88915250 CTGCAAAATGCCCAGAATAGAAACAGACTGCTTTTAAG-TTACACAGATCCCTGAAAGTACAATCACCCTGGAACACATGCACTGAAGTGTTTC-TCTTATTTTATACTGTTTTG-----CCTTCCCTTCCC------------------------------------------- i canFam3.chr5 I 7 C 0 s dasNov3.JH569970 928996 89 + 1009443 ACTTTAATTATCCAA----------------------GTTTAGACAAAGCCCC-AAAGTAAAAACACC-TGGACAGCATGCACTGACATGT----TCTTATTTGATACTGGTTTT-----GC----------------------------------------------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54939422 487 + 72247402 I e proCoq1.NW_012152729v1 2947762 372 + 9850184 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13712552 490 + 13852661 I a score=6822.000000 s hg38.chr16_GL383557v1_alt 58153 46 + 89672 ctcc--------------------cacagtccctt-----------------------cccctcacattc-------------------------cct-------------cccct------------------------------cctttcccc-----------tc s panTro5.chr16 21489646 46 - 81586097 ctcc--------------------cacagtccctt-----------------------cccctcacattc-------------------------cct-------------cccct------------------------------cctttcccc-----------tc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551632 46 - 90481686 ctcc--------------------cacagtccctt-----------------------cccctcacattc-------------------------cct-------------cccct------------------------------cctttcccc-----------tc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784040 45 + 3010529 ctcc--------------------cacagtccctt-----------------------cccctcacattc-------------------------cct--------------ccct------------------------------cctttcccc-----------tc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895845 44 + 163208435 ctcc--------------------cacagtccctt-----------------------ccccacacatcc-------------------------cct-------------cccct------------------------------cttttcccC------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370045 56 - 74971481 gtct--------------------tccccttccct-----------------------cctctccccttc-------------------------ccc-------------accct------------------------------cccctcccttctgttc-ccttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21082648 56 - 78541002 gtct--------------------tccccttccct-----------------------cctctccccttc-------------------------ccc-------------accct------------------------------cccctcccttctgttc-ccttc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475407 56 + 26466322 gtct--------------------tccccttccct-----------------------cctctccccttc-------------------------ccc-------------accct------------------------------cccctcccttctgttc-ccttc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803273 56 + 43916225 gtct--------------------tccccttccct-----------------------cctctccccttc-------------------------ccc-------------accct------------------------------cccttcccttctgttc-ccttc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233463 56 + 75399963 atct--------------------tccccttccct-----------------------cctctccccttc-------------------------ccc-------------accct------------------------------cccctcccttctcttc-ccttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793856 54 - 7209941 gtct--------------------tccccttccct-----------------------cctctccccttc-------------------------ccc-------------accct------------------------------cccttccct--tgttc-ccttc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 535981 101 + 3907144 ctcccattgtcccttcccctcacatcccctcccct-----------------------cctttctcctctcttccccttccctcctctccccttcccc-------------accct------------------------------cccctcccttctgttc-ccttc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540061 92 - 44557958 cacc--------------------caccctccctttgtct------------------cccctcatatcc-------------------------cct-------------ccccttacaatcccctcccttctcttcactccctgtccttcctttcccctctccttc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351383 92 + 6628207 CACC--------------------CACCCTCCCTTTGTCTCTCTCTTAAAACC---CCCCCCTTACACTc-------------------------cct--------------cccttacactcacatcccct--------------tccttcctttcccctctcctcc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333381 83 - 5917169 CACC--------------------CACCCTCCCTTTGTCT------------------CCCCTCATATCC-------------------------CCT-------------CCCCTTACA-TCCCCTGCCTTCCTATC--------CCCTCCTCTCCTCCCCTCTCTT i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13713042 77 + 13852661 ctcc--------------------cagagtgctagggttacaggcgtgagccatggtgcccCCCATATAC-------------------------CCTAATATGTTATGTGATATT------------------------------GGTTTG---------------- i otoGar3.GL873566 I 490 C 0 s mm10.chr8 22476057 1 - 129401213 ------------------------------------------------------------------A----------------------------------------------------------------------------------------------------- i mm10.chr8 C 0 C 0 e canFam3.chr5 80471635 0 + 88915250 C e micMur3.chr20 54939422 487 + 72247402 I e proCoq1.NW_012152729v1 2947762 372 + 9850184 I e dasNov3.JH569970 929085 0 + 1009443 C e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=3014626.000000 s hg38.chr16_GL383557v1_alt 58199 195 + 89672 c-----cttcccttcccCCAATTTCTCTAACTTGCCCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTCGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTACAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTTTCAGAACTTTTACTTC----------CTCATTCAGA s panTro5.chr16 21489692 195 - 81586097 c-----cttcccttacccCAATTTCTCTAACTTGCCCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTTGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTACAAATCACTGGCTGGAAAAGTTGAAAAGGAGTGC-TTTCTACTTTCAGAACTTTTACTTC----------CTCATTCAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551678 195 - 90481686 c-----cttcccttacccCAATTTCTCTAACTTGCCCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTTGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTACAAATCACTGGCTGGAAAAGTTGAAAAGGAGTGC-TTTCTACTTTCAGAACTTTTACTTC----------CTCATTCAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784085 195 + 3010529 c-----cttcccttccctCAATTTCTCTAACTTGCCCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTCGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTACAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTTTCAGAACTTTTAGTTC----------CTCATTCAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53895889 182 + 163208435 ------------------CAATTTCTCTAACTTGCCCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTCGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTTTCAGAACTTTTACTTC----------CTCATTCAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370101 195 - 74971481 c-----cttcccttcccCCAAGTTCTCTAACTTGCTCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAACTTTTACTTC----------CTCATTCAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21082704 195 - 78541002 c-----cttcccttcccCCAAGTTCTCTAACTTGCTCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAACTTTTACTTC----------CTCATTCAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475463 195 + 26466322 c-----cttcccttcccCCAAGTTCTCTAACTTGCTCTAGTCAGTTTATGCTTCATTTG--TATTCCAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAACTTTTACTTC----------CTCATTCAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803329 195 + 43916225 c-----cttcccttcccCCAAGTTCTCTAACTTGCTCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAACTTTTACTTC----------CTCATTCAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233519 195 + 75399963 c-----cttcccttcccCCAAGTTCTCTAACTTGCTTTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAACTTTTACTTC----------CTCATTCAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6793910 195 - 7209941 c-----cttcccttcccccAAGTTCTCTAACTTGCTCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAACTTTTACTTC----------CTCATTCAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536082 194 + 3907144 c-----cttcccttccccCAAGTTCTCTAACTTGCTCTAGTCAGTTTCTGCTTCATTTG--TATTCCAAGT---TTTCTACTTCGGAAGAATTTCAAGGCCCAAAGCA---CTTACTTCCCATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAAAGTTGAAAAGGAATGC-TTTCTACTGTCAGAAC-TTTACTTC----------CTCATTCAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540153 195 - 44557958 c-----cctctcttccccCAATTTCTCTAACTTGCCCTCATCAGTTTCTGCTTCGTTTG--TATTCAAAGT---TTTCTACTTGGGAATAATTTCAAGGCCCAAAGCA---CTTACTTCCTATACCATTTAAGGAAGTCCAAATCACTGGTTGGAAGAGTTGAAAAGAAATGC-TTTCTACTTTCAGAACTTTTACTTC----------CTCATTCAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351475 200 + 6628207 cctAATCTTCTCTTTCCCCAATTTCTCTAACTTGCCCTCATCAGTTTCTGCTTCATTTG--TATTCAAAGT---TTTCTACTTGGGAATAATTTCAAGGCCCAAAGCA---CTTACTTCCTATACCATTTAAGGAAGTCCAAATCACTGGCTGGAAGAGTTGAAAAGGAATGC-TTTCTACTTTCAGAACTTTTACTTT----------CTCATTCAGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333464 195 - 5917169 C-----CTTCTCTTTCCCCAATTTCTCTAACTTGCCCTCATCAGTTTCTGCTTCATTTG--TATTCAAAGT---TTTCTACTTGGGAATAATTTCAAGGCCCAAAGCA---CTTACTTCCTATACCATTTAAGGAAGTCCAAATCACTGGTTGGTAGAGTTGAAAAGGAATGC-TTTCTACTTTCAGAACTTTTACTTC----------CTCATTCAGA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54939909 193 + 72247402 C-----CTTCCCTTCTACCAA-TTCTCTAACTTGCCCTAATCAGTTTCTGTTTTATTTG--TATTCAAAGT---TTTCTACTTAGGAAGAATTTCAAGGCCC-AAGCA---CTTACTTCCCATACCATTTAAGGAAGTTCACATCACTGGCTGGAAATATGGCAAAGGAATGC-TTTCTACTTTCAGAAGTTTTACTTC----------TTTATTCAGA i micMur3.chr20 I 487 I 75 s proCoq1.NW_012152729v1 2948134 192 + 9850184 C-----CTTCCCTTCTACCAA-TTCTCTAAGTTGCCCTCATCAGTTTCTGTTTCATTTG--TATTCAAAGT---TTTCTACTTAGGAA-AATTTCAAGGCCC-AAGCA---CTTACTTCCCACACCATTTAAGGAAGTTCAAATCACTGGCTGGAAATATGGCAAAGGAATGC-TTTCTACTTTCAGAAGTTTTACTTC----------TTTATTCAGA i proCoq1.NW_012152729v1 I 372 C 0 s otoGar3.GL873566 13713119 191 + 13852661 C-----CTTCCCTTCTACCAA-TTCTCTAACTTGCCC-CATCAGTTTCTGCTTCTTTTG--TATTCAAAGT---TTTCTACTTAGAAG-AATTTCGAGCCTC-AAGCA---CTCACTTCCCAAACCATTTAAGGAAGTCTAAGTTACTGGCTGAAAATGTGGCAAAGGAATGC-TTTCTACTTTTGGAAGTTTTACTTC----------TTCATTCAGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22476058 210 - 129401213 -----TCTTCCCTTCCCCCGGTTTCTCGGACTTGTCCCAATCCGTTTGGGCTTCTTTTGTTTGTATCCAGT---TTTCTACTTAGGAAGAGTTTCAAGGCCTAAAGCCCTTCTTCCTTCCCATACCATTTATGGAAGTTCAAGTCACTGGCTGGAAACCTTGCAAAGGAATGC-TCGCCACTTACAGAAGCATTAATCCACTGAGTTGTCACAGTCAGA i mm10.chr8 C 0 I 13 s canFam3.chr5 80471635 183 + 88915250 -----------------CCAATTTCTCTAACTCGCCCCAATCAGTTTCTGCTTCATTTG--TATTCAAAGTTCCTTTCTACTTAGGAAGAATTTCAAGGCCCAAAGAT---CTTACTTCCCATACCATTTATGGAAATCCAAATCACTGGCTGGAAATGTTGCAAAGGAATGCTTTTCTACTTTGATAAC--TTACTTC----------TTCACTCA-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929085 194 + 1009443 ------CTTCCCTTGCCCCAATTTCTCTAATGTGCCCCAATCAGTTTCTGCTTCATTTG--TATTCTAAGT---GTTTTAGTTAGGAAGAATTTCAAGACCCAAAGCT---CTTCCTTCCCATACCATTTATGGAAGTTCAAATCCCTGGCTGAAAAAGTTGCAGAGGAATGC-TTTCTACTTTCAGAAGTTTGACTGC----------TTTGTCCAAA i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=893082.000000 s hg38.chr16_GL383557v1_alt 58394 78 + 89672 TGAT-CT----------------GTGGGCT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTTAAGCCATA s panTro5.chr16 21489887 78 - 81586097 TGAT-CT----------------GTGGGCT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTCTAGAAT----------T----TAAGTAAGTTAAGCCATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551873 78 - 90481686 TGAT-CT----------------GTGGGCT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTCTAGAAT----------T----TAAGTAAGTTAAGCCATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784280 78 + 3010529 TGAT-CT----------------GTGGGCT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896071 78 + 163208435 TGAT-CT----------------GTGGGCT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370296 78 - 74971481 TGAT-CT----------------GTGGGTT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21082899 78 - 78541002 TGAT-CT----------------GTGGGTT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475658 78 + 26466322 TGAT-CT----------------GTGGGTT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803524 74 + 43916225 TGAT-CT----------------GTGGGTT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T--------TAAGTCAAGCCATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233714 78 + 75399963 TGAT-CT----------------GTGGGTT--------TTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794105 78 - 7209941 TGAT-CT----------------GTGGGTT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAGTCAAGCCATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536276 82 + 3907144 TGAT-CT----------------GTGGGTT--------CTCTCTGTGAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------TTAAGTAAGTAAGTCAAGCCATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540348 78 - 44557958 TAAT-CT----------------GTGGGCC--------CTCTCTGTCAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAATCAAGTCATA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351675 78 + 6628207 TAAT-CT----------------GTGGGCC--------CTCTCTGTCAGA--------------------------------ATTACATCCTCCACGACCCACAAGATTTTAGAAT----------T----TAAGTAAATCAAGTCATA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333659 78 - 5917169 TAAT-CT----------------GTGGGCC--------CTCTCTGTCAGA--------------------------------ATTACATCCTCCACAACCCACAAGATTTTAGAAT----------T----TAAGTAAATCAAGTCATA i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2948326 81 + 9850184 ------------------------CATGCC--------CTCTCTGTCAGA--------------------------------ATTACACCCTTCCCAACCCAGAAGGTTTTCGACTATGTTTAAAGA----TAAGTAAGTCACGTTGTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713310 79 + 13852661 --------------------------TGGG--------CTCTCTCTGAGA--------------------------------ATTACATCTTCCACAACCCACAGGGCTTTAGAGTACATTTAAGGT----TAAGTAAGTCAAGTTGTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22476281 127 - 129401213 CAAT-CTAAGAGGTCATGGGCAGGTgggctgggggtgaagttctgtggcacggcacttacttcgtattccaagctgcctgaggttccatccccagca--ctacaag-----aaaaG----------T----TAAGCAAGTTGGGCCATA i mm10.chr8 I 13 C 0 s canFam3.chr5 80471818 88 + 88915250 TGAC-CT----------------GTGAGCC--------TTTTCTGTCAGA--------------------------------ATTATACCCTCCGTAATCCACAAGGTTTCAGAGTATGTTTAAGGT----TAAGTAAATCAAGTCTTA i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 929279 88 + 1009443 TGATCCT----------------GTGAACC--------CTCTCCGTCAGA--------------------------------ATTACACCCTCCACA-TGCACAAGGCATTAAAATATATTTGAGGT----TGAGTAAGTCAAGGCTTA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940102 75 + 72247402 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=896900.000000 s hg38.chr16_GL383557v1_alt 58472 58 + 89672 AACTAGATTCCAGTTGACAAGGATTCTCTGAATTTACAGCTCTACAACGAGTGAAAAG s panTro5.chr16 21489965 58 - 81586097 AACTAGATTCCAGTTGACAAGGATTCTCTGAATTTACAGCTCTACAACGAATGAAAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21551951 58 - 90481686 AACTAGATTCCAGTTGACAAGGATTCTCTGAATTTACAGCTCTACAACGAGTGAAAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784358 55 + 3010529 AACTAGATTCCAGTTGACAAGGATTCTCTGAATTTACAGCTTT---ACGAGTGAAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896149 58 + 163208435 AACTAGATTCCAGTTGACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370374 58 - 74971481 AACTAGATTCCAGTTAACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21082977 58 - 78541002 AACTAGATTCCAGTTAACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475736 58 + 26466322 AACTAGATTCCAGTTAACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803598 58 + 43916225 AACTAGATTCTAGTTAACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233792 58 + 75399963 AACTAGATTCCAGTTAACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794183 58 - 7209941 AACTAGATTCCAGTTAACAAGGATTCTCTGAATTTACAGCTCTACAACTAGTGAAAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536358 58 + 3907144 AACTAGATTCCAGTTAACAAGGATTCTCTGAATTTACAGCTTTACAACTAGTGAAAAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540426 58 - 44557958 AACTAGATTCCAGTTAACAAGAATTCTCTGAATTTACAGCTCTACAACTAGCAAAAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351753 58 + 6628207 AACTAGATTCCAGTTAACAAGAATTATCTGAATTTACAGCTCTACAACTAGCGAAAAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333737 56 - 5917169 AACTAGATTCCAGTTAACAAGAATTCTCTGAATTTACAGCTCTAAAACTAGCGAAA-- i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54940177 57 + 72247402 AACTAGATTCCAATTAATAAGGATTCTCTGAA-TTATAGCTCTACAACCAGTGCAAAG i micMur3.chr20 I 75 C 0 s proCoq1.NW_012152729v1 2948407 58 + 9850184 AACTAGATTCCAATTAATAAGGATTCTCTGAATTTATAGCTCTACAACCAGTGCAAAG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713389 58 + 13852661 TACTAGATTCCAGTTAATAAGGATCCTCTGAATTTATAGCTGTATAACCAGTGAAAAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22476408 58 - 129401213 AACTAGCCCCCAGTTAACAAGGACTCCTTGAATTTACAGTTCAACAGCCAGTGAGAAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80471907 56 + 88915250 AACTAGACTCCAGTTAATAAAGAT--TCTGAATTTATAGTTCTACAGACAGTGAAAAA i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 929367 57 + 1009443 TACTAGAAATCAGTTAATAAGGATTCTCTAAATTTATAGCTCTAGGGCCAG-GAAAAG i dasNov3.JH569970 C 0 C 0 e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=169230.000000 s hg38.chr16_GL383557v1_alt 58530 12 + 89672 CAAGTGAGTTAA s panTro5.chr16 21490023 12 - 81586097 CAAGTGAGTTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552009 12 - 90481686 CAAGTGAGTTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784413 12 + 3010529 CAAGTGAGTTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896207 12 + 163208435 CAAGTGAGTTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370432 12 - 74971481 CAAGTGAGTTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083035 12 - 78541002 CAAGTGAGTTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475794 12 + 26466322 CAAGTGAGTTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803656 12 + 43916225 CAAGTGAGTTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233850 12 + 75399963 CAAGTGAGTTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794241 12 - 7209941 CAAGTGAGTTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536416 12 + 3907144 CAAGTGAGTTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540484 12 - 44557958 AGAGTGAGTTAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351811 12 + 6628207 CAAGTGAGTTAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333793 10 - 5917169 --AGTGAGTTAA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54940234 12 + 72247402 CAAGTGAGTTAA i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13713447 12 + 13852661 CAAGTGAGTTAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22476466 12 - 129401213 CAAGTGAAGTCA i mm10.chr8 C 0 C 0 s dasNov3.JH569970 929424 12 + 1009443 CAAGGGAGTTAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80471963 0 + 88915250 C e proCoq1.NW_012152729v1 2948465 0 + 9850184 C e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=2212605.000000 s hg38.chr16_GL383557v1_alt 58542 274 + 89672 ttt-----attattttattttgagatggagtctcgctct-----------------------gtgcgatcttggctcactgcaacctctgct--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----ctgggattacaggcgtgtgccaccatg----cctggctaagttttgtatttttagtagagatggggttttgccatgttggccaggct-ggcttgaactcctgaacctcaagtgatctgcctgccttggcctcccgaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc s panTro5.chr16 21490035 274 - 81586097 ttt-----attattttattttgagatggagtctcgctct-----------------------gtgagatcttggctcactgcaacctctgcc--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----ctgggattacaggcgtgtgccaccatg----cctggctaacttttgtatttttagtagagatggggttttgccatgttggccaggct-ggcttgaactcctgaacctcaagtgatctgcctgccttggcctcccgaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552021 274 - 90481686 ttt-----attattttattttgagatggagtctcgctct-----------------------gtgagatcttggctcactgcaacctctgcc--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----ctgggattacaggcgtgtgccaccatg----cctggctaacttttgtatttttagtagagatggggttttgccatgttggccaggct-ggcttgaactcctgaacctcaagtgatctgcctgccttggcctcccgaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784425 274 + 3010529 ttt-----attattttattttgagatggagtctcgctct-----------------------gtgcgatcttggctcactgcaatctctgcc--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----ttgggattacaggcgtgtgccaccatg----cctggctaagttttgtatttttagtagagatggggttttgccatgttggccaggct-ggcttgaactcctgaacctcaagtgatctgtctgccttggcctcccgaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896219 273 + 163208435 ttt-----attattttattttaagatggagtctcgctct-----------------------gcgcgatcttggctcactgcaacctctgcc--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----ctaggattacaggcacgtgccatcatg----cctggctaatttttgtatttttagtagagacggggttttgccatgttggccaggct-ggcttgaactcctg-acctcaagtgatctgcctgccttggcctcccaaagtgctgggattaca----ggtgtgagcca---ctgcaccaggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370444 274 - 74971481 ttt-----attattttattttgagatggagtctcgctct-----------------------gcgtgatcttggcttactgcaacttctgtc--tcccaggttcaagcagttctcctgcctcagcctcccaagtagggagactgggattacaggcacgtgccaccatg----cctggctaatttttgtatttttagtagcgacagggttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgcctgccttggccacccaaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083047 274 - 78541002 ttt-----attattttattttgagatggagtctcgctct-----------------------gcgtgatcttggcttactgcaacttctgtc--tcccaggttcaagcagttctcctgcctcagcctcccaagtagggagactgggattacaggcacgtgccaccatg----cctggctaatttttgtatttttagtagcgacagggttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgcctgccttggccacccaaagtgccgggattaca----ggtgtgagcca---ctgcaccgggc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14475806 274 + 26466322 ttt-----attattttattttgagatggagtctcgctct-----------------------gcgtgatcttggcttactgcaacttctgtc--tcccaggttcaagcagttctcctgcctcagcctcccaagtagggagactgggattacaggcacgtgccaccatg----cctggctaatttttgtatttttagtagcaacagggttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgtctgccttggccacccaaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803668 274 + 43916225 ttt-----attattttattttgagatggagtctcgctct-----------------------gcgtgatcttggcttactgcaacttctgtc--tcccaggttcaagcagttctcctgcctcagcctcccaagtagggagactgggattacaggcacatgccaccatg----cctggctaatttttgtacttttagtagcgacagggttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgcctgccttggcctcccaaagtgctgggattaca----ggtgtgagcca---ctgcaccgggt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58233862 274 + 75399963 ttt-----attattttattttgagatggagtttcgctct-----------------------gcgtgatcttggcttactgcaacttctgtc--tcccaggttcaagcagttctcctgcctcagcctcccaagtagggagactgggattacaggcacatgccaccatg----cctggctaatttttgtatttttagtagcgacagagttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgcctgccttggcctcccaaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794253 274 - 7209941 ttt-----attattttattttgagatggagtctcgctct-----------------------gcgtgatcttggcttactgcaacttctgtc--tcccaggttcaagcagtcctcctgcctcagcctcccaagtagggagactgggattacaggcacatgccaccatg----cctggctaatttttgtatttttagtagcgacagggttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgcctgccttggcctctcaaagtgctgggattaca----ggtgtgagcca---ctgcaccgggc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536428 272 + 3907144 ttt-----attattttattttgagatggagtctcgctct-----------------------gcgtgatcttggcttactgcaac--ctgtc--tcccaggttcaagcagttctcctgcctcagcctcccaagtagggagactgggattacaggcgcgtgccaccatg----cctggctaatttttgtatttttagtagcgacagggttttgccatgttggccaggct-ggcttg----cctg-acctcaagtgatctgcctgccttggcctcccaaagtgctgggattaca----ggtgtgggcca---ctgcaccaggc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540496 301 - 44557958 ttttt---gtttttttattttgagatggagtcttgctctgtcaccgagactggagtgtcgtggcataatctcagtttactgcaacctccgcc--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----ctgggattacagtcatgtgccactatg----cctgcctaatttttgtatttttagtagagat-gggtttcaccatgttggccaggctgggcttgaactcctg-acctcaagtgattcacccacctcgacctcccaaagtgctgggattaca----ggtgtgagccaccCCCACACCTAGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6351823 296 + 6628207 tttttttctttttttttttttgagatggagtcttg--ctgtcaccgagactggagtgtagtggcatgatctcggctcactgcaacctccgcc--tcccaggttcaagcagttctcctgcctcagcctctcaagtag-----cttggattacaggcatgtgccactatg----cctggctcatttttgtatttttagtagagat-gggtttcaccatgttggccaggctgggcttgaactcctg-acctcaagtgatccacccaccctggcct------gtactgggattaca----ggtgtgagccaccCCCACAGGCAGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3333803 307 - 5917169 ttttttt-tgttttttattttgagatggagtcttgctctgtcaccaagactggagtgtagtggcatgatctcggctcactgcaacctccacc--tcccaggttcaagcagttctcctgcctcagcctcccaagtag-----cttggattacaggcatgtgccactatg----cctggctaatttttgtatttttagtagagat-gggtttcaccatgttggccaggctgggcttgaactcctg-acctcaagtgatccacccacctcggcctcccaaagtactgggattacaggtgggtgtgagccaccCCCACATCCAGC i cebCap1.NW_016107433v1 C 0 C 0 s mm10.chr8 22476478 194 - 129401213 -----------------------------GTCT----TT-----------------------GTGGCATCTTAG---ACTTGACTCTGTTCCCATCCAAAGTTCAAA-----CTTGAACTTTGGtctgttttgt-------ttgagac------caagtctctctgtgtagccctggctgtcct--------------------ggaactcgctat----accaggct-ggtctcaa-------aaatcaagagatctgcctctc-----------aagtgctaaaattaaa----ggtgtgcatca---gtgcaacaggc i mm10.chr8 C 0 I 988 e canFam3.chr5 80471963 0 + 88915250 C e micMur3.chr20 54940246 0 + 72247402 C e proCoq1.NW_012152729v1 2948465 0 + 9850184 C e dasNov3.JH569970 929436 0 + 1009443 C e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13713459 0 + 13852661 C a score=10500.000000 s hg38.chr16_GL383557v1_alt 58816 1 + 89672 c s panTro5.chr16 21490309 1 - 81586097 c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552295 1 - 90481686 c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784699 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896492 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370718 1 - 74971481 c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083321 1 - 78541002 c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476080 1 + 26466322 c i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803942 1 + 43916225 c i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234136 1 + 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794527 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536700 1 + 3907144 c i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540797 1 - 44557958 C i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352119 1 + 6628207 C i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334110 1 - 5917169 C i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80471963 0 + 88915250 C e micMur3.chr20 54940246 0 + 72247402 C e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948465 0 + 9850184 C e dasNov3.JH569970 929436 0 + 1009443 C e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13713459 0 + 13852661 C a score=9090.000000 s hg38.chr16_GL383557v1_alt 58817 1 + 89672 A s panTro5.chr16 21490310 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552296 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784700 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896493 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370719 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083322 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476081 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803943 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234137 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794528 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536701 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540798 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352120 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334111 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80471963 1 + 88915250 G i canFam3.chr5 C 0 C 0 e micMur3.chr20 54940246 0 + 72247402 C e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948465 0 + 9850184 C e dasNov3.JH569970 929436 0 + 1009443 C e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13713459 0 + 13852661 C a score=138657.000000 s hg38.chr16_GL383557v1_alt 58818 12 + 89672 CAAGTGAGTTAC s panTro5.chr16 21490311 12 - 81586097 CAAGTGAGTTAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552297 12 - 90481686 CAAGTGAGTTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784701 12 + 3010529 CAAGTGAGTTAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896494 12 + 163208435 CAAGTGAGTTAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370720 12 - 74971481 CAAGTGAGTTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083323 12 - 78541002 CAAGTGAGTTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476082 12 + 26466322 CAAGTGAGTTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803944 12 + 43916225 CAAGTGAGTTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234138 12 + 75399963 CAAGTGAGTTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794529 12 - 7209941 CAAGTGAGTTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536702 12 + 3907144 CAAGTGAGTTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540799 12 - 44557958 CAAGTGAGTTAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352121 12 + 6628207 CAAGTGAGTTAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334112 12 - 5917169 CAAGTGAGTTAA i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2948465 12 + 9850184 CAAGTGAGTTAG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80471964 12 + 88915250 CAAGTGAGTTAA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54940246 0 + 72247402 C e mm10.chr8 22476672 988 - 129401213 I e dasNov3.JH569970 929436 0 + 1009443 C e aotNan1.NW_018500622v1 9291144 32 - 10531588 I e otoGar3.GL873566 13713459 0 + 13852661 C a score=522056.000000 s hg38.chr16_GL383557v1_alt 58830 34 + 89672 TATTTAAGGCATCCTAGCCTCCATCTGTTCACAA s panTro5.chr16 21490323 34 - 81586097 TATTTAAGGCATCCTAGCCTCCATCTGTTCACAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552309 34 - 90481686 TATTTAAGGCATCCTAGCCTCCATCTGTTCACAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784713 34 + 3010529 TATTTAAGGCATCCTAGCCTCCATCTGTTCACAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896506 34 + 163208435 TATTTAAGGCATCCTAGCCTCCATCTGTTCACAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370732 34 - 74971481 TATTTAAGGCATCCTAGCCTCCATCTGCTCACCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083335 34 - 78541002 TATTTAAGGCATCCTAGCCTCCATCTGCTCACCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476094 34 + 26466322 TATTTAAGGCATCCTAGCCTCCATCTGCTCACCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803956 34 + 43916225 TATTTAAGGCATCCTAGCCTCCATCTGCTCACCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234150 34 + 75399963 TATTTAAAGCATCCTAGCCTCCATCTGCTCACCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794541 34 - 7209941 TATTTAAGGCATCCTAGCCTCCATCTGCTCACCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536714 34 + 3907144 TATTTAAGGCATCCTAGCCTCCATCTGCTCACCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540811 34 - 44557958 TATTTAAGGCATCTTAGCCTCCATCTGTTCACAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352133 34 + 6628207 TATTTAAGGCATCTTAGCCTCCATCTGTTCACAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334124 34 - 5917169 TATTTAAGGCATCTTAGCCTCCATCTGTTCACAA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54940246 34 + 72247402 TATTTAAGGCATCCTGGCCTCCATCTGTTCACAA i micMur3.chr20 C 0 I 219 s proCoq1.NW_012152729v1 2948477 34 + 9850184 TATTTAAGGCATCCTGGCCTCCATCTGTTCACAA i proCoq1.NW_012152729v1 C 0 I 217 s otoGar3.GL873566 13713459 34 + 13852661 TATTTAAGGCATCATAACCTCTATCTGTTCACAA i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80471976 31 + 88915250 TATTTAAGACACCCTAGCCTCCCTCTGGTCA--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929436 34 + 1009443 TATTTAAGGTATCTTAGTCTCCTTCTGGTCACAA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=333481.000000 s hg38.chr16_GL383557v1_alt 58864 35 + 89672 GTATTCAATGTAGACCAGCAACTTGAACTT--GTCAT s panTro5.chr16 21490357 35 - 81586097 GTATTCAATGTAGACCAGCAACTTGAACTT--GTCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552343 35 - 90481686 GTATTCAATGTAGACCAGCAACTTGAACTT--GTCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784747 35 + 3010529 GTATTCAGTGTAGACCAGCAACTTGAACTT--GTCAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896540 35 + 163208435 GCATTCAATGTAGACGAGCGACTTGAACTT--GTCAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370766 34 - 74971481 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083369 34 - 78541002 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476128 34 + 26466322 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20803990 34 + 43916225 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234184 34 + 75399963 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794575 34 - 7209941 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536748 34 + 3907144 GCATTCAATGTAGACCAGCGACTT-AACTT--GTCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540845 35 - 44557958 ACATTCAATGTAGACCAGCAACTTGAACTT--GTCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352167 35 + 6628207 GCATTCAATGTAGACCAGCAACTTGAACTT--GTCAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334158 35 - 5917169 GCATTCAATGTAAACCAGCAACTTGAACTT--GTCAC i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13713494 34 + 13852661 ATATTTGATCCAGACTAGTGTCTTAAACTTTGGT--- i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80472007 33 + 88915250 -TATTCAATGAAGATCAGTGACCTGAACTTTGGT--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929470 34 + 1009443 ACATTCAGTGTAGATCAGTGATTTGAACTTTGGT--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e aotNan1.NW_018500622v1 9291144 32 - 10531588 I a score=304476.000000 s hg38.chr16_GL383557v1_alt 58899 23 + 89672 TTCAACC----------ACTTAAAACATTTCTT s panTro5.chr16 21490392 23 - 81586097 TTCAACC----------ACTTAAAACATTTCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552378 23 - 90481686 TTCAACC----------ACTTAAAACATTTCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784782 23 + 3010529 TTCAACC----------ACTTAAAACATTTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896575 23 + 163208435 TTCAACC----------ACTTAAAACATTTCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21370800 23 - 74971481 TTCAACC----------ACTTAAAACATTTCTT i rheMac8.chr20 C 0 I 322 s macFas5.chr20 21083403 23 - 78541002 TTCAACC----------ACTTAAAACATTTCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476162 23 + 26466322 TTCAACC----------ACTTAAAACATTTCTT i macNem1.NW_012011355v1 C 0 I 304 s cerAty1.NW_011999143v1 20804024 23 + 43916225 TTCAACC----------ACTTAAAACATTTCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234218 23 + 75399963 TTCAACC----------ACTTAAAACATTTCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794609 23 - 7209941 TTCAACC----------ACTTAAAACATTTCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536782 23 + 3907144 TTCAACC----------ACTTAAAACATTTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540880 23 - 44557958 TTCAACC----------ACTTAAAACATTTCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352202 23 + 6628207 TTCAACC----------ACTTAAAACATTTCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334193 23 - 5917169 TTCAACC----------ACTTAAAACATTTCTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291176 23 - 10531588 TTCAACC----------ACTTAAAACATTTCTT i aotNan1.NW_018500622v1 I 32 C 0 s otoGar3.GL873566 13713528 32 + 13852661 TTCAACCACACAA-AAGACCTAGAACACTTCTA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472040 28 + 88915250 TTCAACCACATT-----ACCTAAAACATTTCTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929504 33 + 1009443 TTCAAAGAGACAAGAGGACCTAAAACGTTTCTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I a score=28809.000000 s hg38.chr16_GL383557v1_alt 58922 2 + 89672 AG s panTro5.chr16 21490415 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552401 2 - 90481686 AG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784805 2 + 3010529 AG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896598 2 + 163208435 AG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371145 2 - 74971481 ag i rheMac8.chr20 I 322 C 0 s macFas5.chr20 21083426 2 - 78541002 AG i macFas5.chr20 C 0 I 319 s macNem1.NW_012011355v1 14476489 2 + 26466322 ag i macNem1.NW_012011355v1 I 304 C 0 s cerAty1.NW_011999143v1 20804047 2 + 43916225 AG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234241 2 + 75399963 AG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794632 2 - 7209941 AG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536805 2 + 3907144 AG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540903 2 - 44557958 AG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352225 2 + 6628207 AG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334216 2 - 5917169 AG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291199 2 - 10531588 AG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13713560 2 + 13852661 AG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472068 2 + 88915250 AG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929537 2 + 1009443 AT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I a score=174562.000000 s hg38.chr16_GL383557v1_alt 58924 14 + 89672 AAAGGACAGAATCT s panTro5.chr16 21490417 14 - 81586097 AAAGGACAGAATCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552403 14 - 90481686 AAAGGACAGAATCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784807 14 + 3010529 AAAGGACAGAATCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896600 14 + 163208435 AAAGGACAGGATCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371147 14 - 74971481 aaaGGACAGGATCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083747 14 - 78541002 aaaGGACAGGATCT i macFas5.chr20 I 319 C 0 s macNem1.NW_012011355v1 14476491 14 + 26466322 aaaGGACAGGATCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804049 14 + 43916225 AAAGGACAGGATCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234243 14 + 75399963 AAAGGACAGGATCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794634 14 - 7209941 AAAGGACAGGATCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536807 14 + 3907144 AAAGGACAGGATCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540905 14 - 44557958 AAAGGAGAGGATCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352227 14 + 6628207 AAAGGAAAGGATCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3334218 14 - 5917169 AAAGGAGAGGATCT i cebCap1.NW_016107433v1 C 0 I 1825 s aotNan1.NW_018500622v1 9291201 14 - 10531588 AAAGGAGAGGATCT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13713562 14 + 13852661 GATGGCCAGGATCT i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80472070 14 + 88915250 CAAGGGCAGGATCG i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 929539 13 + 1009443 -GAAGGCAGGATCT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I a score=120453.000000 s hg38.chr16_GL383557v1_alt 58938 15 + 89672 TCAGTAAACTAAAAA s panTro5.chr16 21490431 15 - 81586097 TCAGTAAACTAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552417 15 - 90481686 TCAGTAAACTAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784821 15 + 3010529 TCAGTAAACTAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896614 15 + 163208435 TCAGTAAACTAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371161 15 - 74971481 TCAGTAAGCTAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083761 15 - 78541002 TCAGTAAGCTAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476505 15 + 26466322 TCAGTAAGCTAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804063 15 + 43916225 TCAGTAAGCTAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234257 15 + 75399963 TCAGTAAGCTAAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794648 15 - 7209941 TCAGTAAGCTAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536821 15 + 3907144 TCAGTAAGCTCAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540919 15 - 44557958 TCAGTCTGCTATAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352241 15 + 6628207 TCAGTCTGCTATAAA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9291215 15 - 10531588 TCAGTCTGCTATAAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13713577 15 + 13852661 CCAGTCTATTGAAAA i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80472085 15 + 88915250 ATAGTCCACTGTAAG i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 929552 6 + 1009443 -------ACTGAA-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e cebCap1.NW_016107433v1 3334232 1825 - 5917169 I a score=646875.000000 s hg38.chr16_GL383557v1_alt 58953 56 + 89672 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA s panTro5.chr16 21490446 56 - 81586097 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552432 55 - 90481686 GGTCCCTAATAGTCCAGTCTAGTCCAGACTGGAA-AAATATACCTTA----CA---G-AAAA-AA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784836 55 + 3010529 GGTCCCTAATAGTCCAGTCTAATCCAGACTGG-A-AAATATACCTTA----CA---GAAAAA-AA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896629 56 + 163208435 GGTCCCTAATAGTCCAATCTAATCCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371176 56 - 74971481 GGTCCCTAACAGTCCAGTCTAATCCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083776 56 - 78541002 GGTCCCTAACAGTCCAGTCTAATCCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476520 56 + 26466322 GGTCCCTAACAGTCCAGTCTAATCCAGACTGGAA-AAACATACCTTA----CA---GAAAAA-AA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804078 56 + 43916225 GGTCCCTAACAGTCCAGTCTAAACCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234272 56 + 75399963 GGTCCCTAACAGTCCAGTCTAGTCCAGACTGGAA-AAATATACCTTA----CA---GAAAAA-AA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794663 56 - 7209941 GGTCCCTAACAGTCCAGTCTAATCCAGACTGGTA-AAATATACCTTA----CA---GAAAAA-AA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536836 56 + 3907144 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AAATATGCCTTA----CA---GAAAAA-AA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540934 57 - 44557958 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AACTATACCTTA----CA---GAAAAAGAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352256 54 + 6628207 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AACTAT--CTTA----CA---GAAAAA-AA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336057 56 - 5917169 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AACTATACCTTA----CA---GAAAAA-AA i cebCap1.NW_016107433v1 I 1825 I 308 s aotNan1.NW_018500622v1 9291230 56 - 10531588 GGTCCCTAATAGTCCAGTCTAATCCAGACTGGAA-AACTATACCTTA----CA---GAAAAA-AA i aotNan1.NW_018500622v1 C 0 I 1 s otoGar3.GL873566 13713592 59 + 13852661 GGTCATCAATGGTCCAGTTTAATGCAGACTGCAA-AAATATGCTTTG----GAAATGAAGGA-AA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472100 48 + 88915250 --GTTGTAATAGTCCAGACTAATGTAGACCGGGA-GAATATGCCTCA----CT---AA------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929558 51 + 1009443 ----------AGTAGAGTCTCATGCAGACTGGGAGAAAAATGCCTCACTTCCA---GAAAGA-AA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I a score=94097.000000 s hg38.chr16_GL383557v1_alt 59009 10 + 89672 TGTATTCAAC- s panTro5.chr16 21490502 10 - 81586097 TTTATTCAAC- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552487 10 - 90481686 TTTATTCAAC- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784891 10 + 3010529 TTTATTCAAC- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896685 10 + 163208435 TTTATTCAAC- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371232 10 - 74971481 TTTATTCAAC- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083832 10 - 78541002 TTTATTCAAC- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476576 10 + 26466322 TTTATTCAAC- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804134 10 + 43916225 TTTATTCAAC- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234328 10 + 75399963 TTTATTCAAC- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794719 10 - 7209941 TTTATTCAAC- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536892 10 + 3907144 TTTATTCAAC- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21540991 10 - 44557958 AATATTCAAC- i calJac3.chr20 C 0 I 287 s saiBol1.JH378225 6352310 10 + 6628207 AATATTCAAG- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9291287 10 - 10531588 TATATTCAAC- i aotNan1.NW_018500622v1 I 1 C 0 s otoGar3.GL873566 13713651 10 + 13852661 TTCATCCAAT- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472148 10 + 88915250 TTGATTCAAG- i canFam3.chr5 C 0 I 6 s dasNov3.JH569970 929609 11 + 1009443 TATATTCAAGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e cebCap1.NW_016107433v1 3336113 308 - 5917169 I a score=11849.000000 s hg38.chr16_GL383557v1_alt 59019 1 + 89672 A s panTro5.chr16 21490512 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552497 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784901 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896695 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371242 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083842 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476586 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804144 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234338 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794729 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536902 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541288 1 - 44557958 a i calJac3.chr20 I 287 C 0 s saiBol1.JH378225 6352320 1 + 6628207 A i saiBol1.JH378225 C 0 I 280 s aotNan1.NW_018500622v1 9291297 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13713661 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472164 1 + 88915250 G i canFam3.chr5 I 6 C 0 s dasNov3.JH569970 929620 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e cebCap1.NW_016107433v1 3336113 308 - 5917169 I a score=50281.000000 s hg38.chr16_GL383557v1_alt 59020 5 + 89672 AGAGG s panTro5.chr16 21490513 5 - 81586097 AGAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552498 5 - 90481686 AGAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784902 5 + 3010529 AGAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896696 5 + 163208435 AGAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371243 5 - 74971481 TGAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083843 5 - 78541002 TGAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476587 5 + 26466322 TGAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804145 5 + 43916225 TGAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234339 5 + 75399963 TGAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794730 5 - 7209941 TGAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536903 5 + 3907144 TGAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541289 5 - 44557958 agagg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352601 5 + 6628207 agagg i saiBol1.JH378225 I 280 C 0 s aotNan1.NW_018500622v1 9291298 5 - 10531588 AGAGG i aotNan1.NW_018500622v1 C 0 I 295 s otoGar3.GL873566 13713662 4 + 13852661 -AAAG i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80472165 5 + 88915250 AGAGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929621 5 + 1009443 AAAGG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e cebCap1.NW_016107433v1 3336113 308 - 5917169 I a score=10099.000000 s hg38.chr16_GL383557v1_alt 59025 6 + 89672 CAAG-TT s panTro5.chr16 21490518 6 - 81586097 CAAG-TT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552503 6 - 90481686 CAAG-TT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784907 6 + 3010529 CAAG-TT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896701 6 + 163208435 CGAG-TT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371248 6 - 74971481 CAAG-TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083848 6 - 78541002 CAAG-TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476592 6 + 26466322 CAAG-TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804150 6 + 43916225 CAAG-TT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234344 6 + 75399963 CAAG-TT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794735 6 - 7209941 CAAG-TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536908 7 + 3907144 CAAGTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541294 5 - 44557958 aaaG-C- i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6352606 5 + 6628207 aaaG-C- i saiBol1.JH378225 C 0 I 2 s otoGar3.GL873566 13713667 2 + 13852661 -AA---- i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80472170 6 + 88915250 AAAA-TT i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 929626 4 + 1009443 AAAG--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e aotNan1.NW_018500622v1 9291303 295 - 10531588 I e cebCap1.NW_016107433v1 3336113 308 - 5917169 I a score=252857.000000 s hg38.chr16_GL383557v1_alt 59031 28 + 89672 --TTTTTTT-ACACAGGTGACCTAAAAAGTT s panTro5.chr16 21490524 29 - 81586097 --TTTTTTTTACAGAGGTGACCTAAAAAGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552509 27 - 90481686 --TTTTTT--ACAGAGGTGACCTAAAAAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784913 29 + 3010529 --TTTTTTTTACACAGGTGATCTAAAAAGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896707 28 + 163208435 --TTTTTTT-ACACAGGTGACCTAAAAAGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371254 26 - 74971481 --TTTTT---ACACAGGTGACCTAAAAAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083854 26 - 78541002 --TTTTT---ACACAGGTGACCTAAAAAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476598 26 + 26466322 --TTTTT---ACACAGGTGACCTAAAAAGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804156 26 + 43916225 --TTTTT---ACACAGGTGACCTAAAAAGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234350 26 + 75399963 --TTTTT---ACACAGGTGACCTAAAAAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794741 26 - 7209941 --TTTTT---ACACAGGTGACCTAAAAAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536915 26 + 3907144 --TTTTT---ACACAGGTGAGCTAAAAAGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541301 26 - 44557958 --TTTTT---ATACCGGTAACCTAAAAGCTT i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6352613 25 + 6628207 --TTTTT---A-ACAGGTGACCTAAAAGCTT i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3336421 26 - 5917169 --TTTTT---ATACAGGTGAGCTAAAAGCTT i cebCap1.NW_016107433v1 I 308 C 0 s aotNan1.NW_018500622v1 9291598 26 - 10531588 --TTTTT---ACACAGGAGACCTAAAAGCTT i aotNan1.NW_018500622v1 I 295 C 0 s otoGar3.GL873566 13713669 25 + 13852661 ---TTTC---ACACATATGGCCTAAAAAGTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472178 26 + 88915250 --TTTGC---CCATggaacacctgggtagct i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 929630 28 + 1009443 CTACTTT---ATACAGATGACCTAAAGAGTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I a score=110880.000000 s hg38.chr16_GL383557v1_alt 59059 10 + 89672 GCAGGTA-----ttt s panTro5.chr16 21490553 10 - 81586097 GCAGGTA-----ttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552536 10 - 90481686 GCAGGTA-----ttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784942 10 + 3010529 GCAGGTA-----ttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896735 15 + 163208435 GCAGGTAttttgttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371280 10 - 74971481 GCAGGTA-----ttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083880 10 - 78541002 GCAGGTA-----ttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476624 10 + 26466322 GCAGGTA-----TTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804182 10 + 43916225 GCAGGTA-----ttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234376 10 + 75399963 GCAGGTG-----TTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794767 10 - 7209941 GCAGGTA-----ttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536941 10 + 3907144 GCAGGTA-----ttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541327 10 - 44557958 GCAGGTA-----ttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352638 10 + 6628207 GCAGGTA-----ttt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336447 10 - 5917169 GCAGGTA-----ttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291624 10 - 10531588 GCAGGTA-----ttt i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 929658 10 + 1009443 GCACTTA-----TTT i dasNov3.JH569970 C 0 I 69 e canFam3.chr5 80472204 0 + 88915250 C e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e otoGar3.GL873566 13713694 0 + 13852661 C a score=1654118.000000 s hg38.chr16_GL383557v1_alt 59069 188 + 89672 tgttttc-----tttgagagagggtctc-aaaaaaatctaggctggagtgcagcggcgtgctcagggatcactgcagcctcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctgggactacaggtgcttgccaccacgcctg-------gctaatttttgtatgttttgtagggatggagtttca s panTro5.chr16 21490563 188 - 81586097 tgttttc-----tttgagagagggtctc-aaaaaaatctaggctggagtgcagcggcgtgctcagggatcactgcagcctcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctgggactacaggtgcttgccaccacgcctg-------gctaatttttgtatgttttgtagggatggagtttca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552546 188 - 90481686 tgttttc-----tttgagagagggtctc-aaaaaaatctaggctggagtgcagcggcgtgctcagggatcactgcagcctcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctgggactacaggtgcttgccaccacgcctg-------gctaatttttgtatgttttgtagggatggagtttca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 784952 188 + 3010529 tgttttc-----tttgagagagggtctc-aaaaaaatctaggctagagtgcagcggcgtgctcagggatcactgcagcctcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctgggactacaggtgcttgccaccacgcctg-------gctaatttttgtatgttttgtagggatggagtttca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896750 188 + 163208435 tgttttc-----tttgagagaggatctc-aaaaaaatctaggctggagtaccgtggcgtgctcagggatcactgcagcctcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctgggactacaggtgcttgccaccatgcctg-------gctaatttttgtatgttttgtagggatggagtttca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371290 174 - 74971481 ---tttc-----tttgagagagggtctcaaaaaaaatccaggctagagtgcagtggcgtgct------------cagcttcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctggtactacaggtgcttgccaccacacctg-------gctaatttttgtatgttttgtagggatggagtttca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21083890 174 - 78541002 ---tttc-----tttgagagagggtctcaaaaaaaatccaggctagagtgcagtggcgtgct------------cagcttcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctggtactacaggtgcttgccaccacacctg-------gctaatttttgtatgttttgtagggatggagtttca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476634 174 + 26466322 ---TTTC-----TTTGAGAGAAGGTCTCAAAAAAAATccaggctagagtgcagtggcgtgct------------cagcttcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctggtactacaggtgcttgccaccacacctg-------gctaatttttgtatgttttgtagggatggagtttca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804192 174 + 43916225 ---tttc-----tttgagagagggtctcaaaaaaaatccaggctagagtgcagtggcgtgct------------cagcctcttcctcctggtctcaagcaatcctcccacctcagcctcc---tgagaagctggtactacaggtgcttgccaccacacctg-------gctaatttttgtacgttttgtagggatggagtttca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234386 174 + 75399963 ---TTCC-----TTTGAGAGAGGGTCTCAAAAAAAATccaggctagagtgcagtggcgtgct------------cagcctctttctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctggtactacaggtgcttgccaccacacctg-------gctaatttttgtatgttttgtacggatggagtttca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794777 174 - 7209941 ---tttc-----tttgagagagggtctcaaaaaaaatccaggctagagtgcagtggcgtgct------------cagcctcttcctcctgggctcaagcaatcctcctacctcagcctcc---tgagaagctggtactacaggtgcttgccaccacacctg-------gctaatttttgtatgttttgtagggatggagtttca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 536951 170 + 3907144 ------------tttgagagagggtctcaaaaaaaatccaggctagagtgcagtggtgtgct------------cagcctcttcctccggggctcaagcaatcctcccacctcggcctcc---tgagaacctggtactacaggtgcttgccaccacatctg-------gctaatttttgtatgttttgcagggatagagtttca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541337 188 - 44557958 tgttttgt----tttgagacagggtctc--aaaaaatctaggctggagtgtagtggtgcgctcagggaacacttcagcctcttcctcctgggctcaagcaatcctcccacctcagcctcc---tgagaagctgggactacaggtgattgcaatgatgcctg-------gctaatttttgtatgttttgtagggacagagtttca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352648 187 + 6628207 tgttttg-----tttgaggccgggtctc--aaaaaatctagactggagtgtagtggtgcactcagggaacacttcagcctcttcctcctgggctcaagcaatcctccaacctcagcctcc---tgagaagctgggactacaggtgattgaaatgatgcctg-------gctaatttttgtatgttttgtagggacagaatttca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336457 185 - 5917169 tgtcttg-----tttgagaccaggtctc--aaaaaatctaggctggagtgtagtgtcgcgctcagggaacacttcagcctcttcctcctgggctcaagcaatcctccaacctcagcctcc---tgagaagctgggactacaggtgattgaaatgatgcctg-------gttaatttttg--tgttttgtagggacagagtttca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291634 192 - 10531588 tgttttgttttgtttgagtcagggtctc--aaaaaatctaggctggtgtgtagtggcgcgctcagggaacacttcagcctcttcctcctgggctcaagcaatcctcccatctcagcctcc---tgagaagctgggactacaggtgattgaaatgatgcctg-------gctaatttttgtatgttttgtagggacagagtttca i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80472204 146 + 88915250 ------c-----agtggttgagcgtct-------------gccttcggctcag-ggcgtgatcctggggc----------------cccgggatcgag------tcccacgtcgggctccctgtgtggagcc-----------tgcttctccctctgcctgtgtctctgcctctgtttgtctctcatgaatgaatcaaatctta i canFam3.chr5 C 0 I 131 e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e dasNov3.JH569970 929668 69 + 1009443 I e otoGar3.GL873566 13713694 0 + 13852661 C a score=821543.000000 s hg38.chr16_GL383557v1_alt 59257 83 + 89672 ccatgttgcccaggctggtctcaaagtcctc-agttcaagctatttgccagtctcagcctcccaaagtgctgggattac-------agcca s panTro5.chr16 21490751 83 - 81586097 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagctatttgccagtctcagcctcccaaagtgctgggattac-------agcca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552734 83 - 90481686 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagctatttgccagtctcagcctcccaaagtgctgggattac-------agcca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785140 83 + 3010529 tcatgttgcccaggctggtctcaaagtcctt-ggttcaagctatttgccagtctcagcctcccaaagtgctgggattac-------agcca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53896938 90 + 163208435 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagctatttgccagtctcagcctcccaaagtgctgggattacaggcgtgagcca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371464 90 - 74971481 ccatgttgcccaggctggtctcaaagtcctc-agttcaagcgatttgccagtctcagccttccacagtgctgggattacaggtgtgagcca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084064 90 - 78541002 ccatgttgcccaggctggtctcaaagtcctc-agttcaagcgatttgccagtctcagccttccacagtgctgggattacaggtgtgagcca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476808 90 + 26466322 ccatgttgcccaggctggtctcaaagttctc-agttcaagcgatttgccagtctcagccttccacagtgctgggattacaggtgtgagcca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804366 90 + 43916225 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagcgatttgccagtctcagccttccacagtgctgggattacaggtgtgagcca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234560 90 + 75399963 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagcgatttgccagtctcagccttccacagtgctgggattacaggtgtgagcca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6794951 90 - 7209941 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagcgatttgccagtctcagccttccacagtgctgggattacaggtgtgagcca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537121 90 + 3907144 ccatgttgcccaggctggtctcaaagtcctc-ggttcaagcgatttgccagtctcagccttccacagtgctgagattacaggtgtgagcca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541525 90 - 44557958 ccatgttgcccaggctggtctcgaattcctc-ggttcaagtgatttgccagtcttggcttcccaaagtgctgggattacaggaatgggcca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352835 90 + 6628207 ccatgttgctcaggctggtcttgaactcctt-gtttcaagtgatttgccagtcttggcttcctaaagtgctgggattacaggaatgggcca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336642 90 - 5917169 ccatgttgcccaggatcatcttgaactcctc-ggttcaagtgatttgccagtcttggcttcccaaagtgctgggattacaggaatgggcca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291826 88 - 10531588 ccatgttgcccaggctggtctcgaactccttgggttcaagtgatttgccagtcttggctt---aaagtgctgggataacaggaatgggcca i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80472350 131 + 88915250 I e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e dasNov3.JH569970 929668 69 + 1009443 I e otoGar3.GL873566 13713694 0 + 13852661 C a score=95849.000000 s hg38.chr16_GL383557v1_alt 59340 9 + 89672 tggcgccca s panTro5.chr16 21490834 9 - 81586097 tggcgccca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552817 9 - 90481686 tggcgccca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785223 9 + 3010529 tggcgccca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897028 9 + 163208435 tggcgccta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371554 9 - 74971481 tggcaccca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084154 9 - 78541002 tggcaccca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476898 9 + 26466322 tggcaccca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804456 9 + 43916225 tggcaccca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234650 9 + 75399963 tggcgccca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795041 9 - 7209941 tggcaccca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537211 9 + 3907144 tggcaccca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541615 9 - 44557958 tggtgtcta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352925 9 + 6628207 tggtgccca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336732 9 - 5917169 tggtgccca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291914 9 - 10531588 tggtgccca i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 929737 9 + 1009443 TGGCATCCA i dasNov3.JH569970 I 69 C 0 e canFam3.chr5 80472350 131 + 88915250 I e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I e otoGar3.GL873566 13713694 0 + 13852661 C a score=59147.000000 s hg38.chr16_GL383557v1_alt 59349 5 + 89672 gcAGG s panTro5.chr16 21490843 5 - 81586097 gcAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552826 5 - 90481686 gcAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785232 5 + 3010529 gcAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897037 5 + 163208435 gcAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371563 5 - 74971481 gcAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084163 5 - 78541002 gcAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476907 5 + 26466322 gcAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804465 5 + 43916225 gcAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234659 5 + 75399963 gcAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795050 5 - 7209941 gcAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537220 5 + 3907144 gcAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541624 5 - 44557958 gcAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352934 5 + 6628207 gcAGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336741 5 - 5917169 gcAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291923 5 - 10531588 gcAGG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13713694 5 + 13852661 GCAGC i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 929746 5 + 1009443 TTAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80472350 131 + 88915250 I e micMur3.chr20 54940280 219 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2948511 217 + 9850184 I a score=144153.000000 s hg38.chr16_GL383557v1_alt 59354 9 + 89672 -TATTTGTTT s panTro5.chr16 21490848 9 - 81586097 -TATTTGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552831 9 - 90481686 -TATTTGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785237 9 + 3010529 -TATTTGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897042 9 + 163208435 -TATTTGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371568 9 - 74971481 -TATTTGTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084168 9 - 78541002 -TATTTGTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476912 9 + 26466322 -TATTTGTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804470 9 + 43916225 -TATTTGTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234664 9 + 75399963 -TATTTGTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795055 9 - 7209941 -TATTTGTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537225 9 + 3907144 -TATTTGTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541629 9 - 44557958 -TATTTGTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352939 9 + 6628207 -TATTTGTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336746 9 - 5917169 -TATTTGTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291928 9 - 10531588 -TATTTGTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54940499 9 + 72247402 -TATTTGTTT i micMur3.chr20 I 219 C 0 s proCoq1.NW_012152729v1 2948728 9 + 9850184 -TATTTGTTT i proCoq1.NW_012152729v1 I 217 C 0 s otoGar3.GL873566 13713699 9 + 13852661 -TATTTGTTT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 929751 10 + 1009443 AACCCTGTTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80472350 131 + 88915250 I e mm10.chr8 22476672 988 - 129401213 I a score=216293.000000 s hg38.chr16_GL383557v1_alt 59363 13 + 89672 AAATTACTCCTAT s panTro5.chr16 21490857 13 - 81586097 AAATTACTCCTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552840 13 - 90481686 AAATTACTCCTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785246 13 + 3010529 AAATTACTCCTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897051 13 + 163208435 AAATTACTCCTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371577 13 - 74971481 AAATTACTCCTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084177 13 - 78541002 AAATTACTCCTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476921 13 + 26466322 AAATTACTCCTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804479 13 + 43916225 AAATTACTCCTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234673 13 + 75399963 AAATTACTCCTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795064 13 - 7209941 AAATTACTCCTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537234 13 + 3907144 AAATTACTCCTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541638 13 - 44557958 AAATTACTCCCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352948 13 + 6628207 AAATTACTCCTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336755 13 - 5917169 AAATTACTCCTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9291937 13 - 10531588 AAATTACTCCTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54940508 13 + 72247402 AAATTACTCCTAT i micMur3.chr20 C 0 I 473 s proCoq1.NW_012152729v1 2948737 13 + 9850184 AAATTACTCCTAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713708 13 + 13852661 AAATTACTCCTAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472481 13 + 88915250 AAATAACTCCTAT i canFam3.chr5 I 131 C 0 s dasNov3.JH569970 929761 11 + 1009443 TATCTGTTCCC-- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I a score=594660.000000 s hg38.chr16_GL383557v1_alt 59376 53 + 89672 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--CATCCATTATAAATCTT s panTro5.chr16 21490870 53 - 81586097 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--CATCCATTATAAatctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552853 53 - 90481686 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--CATCCATTATAAatctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785259 53 + 3010529 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--CATCCATTATAAATCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897064 53 + 163208435 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--CATCCATTATAAACCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371590 53 - 74971481 CACTGTA----AAACCT--AACAAGTAGGGCAGAGGCAAACA--CATCTATTATAAatctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084190 53 - 78541002 CACTGTA----AAACCT--AACAAGTAGGGCAGAGGCAAACA--CATCTATTATAAatctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476934 53 + 26466322 CACTGTA----AAACCT--AACAAGTAGGGCAGAGGCAAACA--CATCTATTATAAATCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804492 53 + 43916225 CACTGTA----AAACCT--AACAAGTAGGGCAGAGGCAAACA--CATCTATTATAAATCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234686 53 + 75399963 CACTGTA----AAACCT--AACAAGTGGGGCAGAGGCAAACA--CATCTATTATAAACCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795077 53 - 7209941 CACTGTA----AAACCT--AACAAGTAGGGCAGAGGCAAACA--CATCTATTATAAatctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537247 53 + 3907144 CACTGTA----AAACCT--AACAAGTGGGGCAGAGGCAAACA--CATCTATTATAAACTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541651 53 - 44557958 CACTGTA----AAACCT--AAAAGGTGGGGCGGAGGCAAAGA--TACCCATTATAAACCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6352961 53 + 6628207 CACTATA----AAACCT--AACAGATGGGGTAGAGGCAAAGA--AACCCATTATAAACCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3336768 53 - 5917169 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--TACCCATTATAAACCTT i cebCap1.NW_016107433v1 C 0 I 1460 s aotNan1.NW_018500622v1 9291950 53 - 10531588 CACTGTA----AAACCT--AACAGGTGGGGCAGAGGCAAAGA--TACCCATTATAAACCTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2948750 56 + 9850184 AACTGTA----AAACCT-AAACAGGTGGGGCAGAGGAGAGGCAGCATTCATTAGAAACCTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713721 56 + 13852661 CACTGTA----AAACCTAAAACAGGTGGGGCAGAGGAAAGGGCTCATTCATTA-AAACTTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472494 56 + 88915250 CACTGTAGAAGAAACTA--AAGAGGCAAAGGAGAGAAGCGGA---ATCCATTATAAACCTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929772 4 + 1009443 ---------------------------------------------------------TCTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940521 473 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I a score=82585.000000 s hg38.chr16_GL383557v1_alt 59429 10 + 89672 ATCATATCTG s panTro5.chr16 21490923 10 - 81586097 atcatatctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552906 10 - 90481686 atcatatctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785312 10 + 3010529 ATCATATTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897117 10 + 163208435 ATCATATCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371643 10 - 74971481 atcatatctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084243 10 - 78541002 atcatatctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476987 10 + 26466322 ATCATATCTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804545 10 + 43916225 ATCATATCTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234739 10 + 75399963 ATCATATCAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795130 10 - 7209941 atcatatctg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537300 10 + 3907144 ATCATATCTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541704 6 - 44557958 ----TATCTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353014 6 + 6628207 ----TATCTG i saiBol1.JH378225 C 0 I 256 s aotNan1.NW_018500622v1 9292003 6 - 10531588 ----TATCTG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2948806 10 + 9850184 GTTGTATCTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713777 4 + 13852661 ------CCTG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472550 10 + 88915250 GTTTTATCTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929776 3 + 1009443 -----ATC-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940521 473 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=10424.000000 s hg38.chr16_GL383557v1_alt 59439 1 + 89672 T s panTro5.chr16 21490933 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552916 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785322 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897127 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371653 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084253 1 - 78541002 t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476997 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804555 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234749 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795140 1 - 7209941 t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537310 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541710 1 - 44557958 T i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9292009 1 - 10531588 C i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2948816 1 + 9850184 T i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713781 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472560 1 + 88915250 T i canFam3.chr5 C 0 C 0 e micMur3.chr20 54940521 473 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e dasNov3.JH569970 929779 0 + 1009443 C e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I e saiBol1.JH378225 6353020 256 + 6628207 I a score=81844.000000 s hg38.chr16_GL383557v1_alt 59440 8 + 89672 TCTTTCTT s panTro5.chr16 21490934 8 - 81586097 tctttctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552917 8 - 90481686 tctttctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785323 8 + 3010529 TCTTTCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897128 8 + 163208435 TCTTTCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371654 8 - 74971481 tctttctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084254 8 - 78541002 tctttctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14476998 8 + 26466322 TCTTTCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804556 8 + 43916225 TCTTTCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234750 8 + 75399963 TCTTTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795141 8 - 7209941 tctttctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537311 8 + 3907144 TCTTTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541711 8 - 44557958 ACTTTCTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353276 8 + 6628207 TTTTTCTT i saiBol1.JH378225 I 256 C 0 s aotNan1.NW_018500622v1 9292010 8 - 10531588 TCTTCCTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2948817 8 + 9850184 TCCCTCTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13713782 8 + 13852661 TTCCTTTT i otoGar3.GL873566 C 0 I 264 s canFam3.chr5 80472561 8 + 88915250 TCCTGCTT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54940521 473 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e dasNov3.JH569970 929779 0 + 1009443 C e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=674105.000000 s hg38.chr16_GL383557v1_alt 59448 72 + 89672 ATCAAACCTAAAATAGGCTGTCCTTTATGTGATAAATTATTGGGCTCTGTTTATCTCTCTTATAACCTCTCT s panTro5.chr16 21490942 72 - 81586097 atcAAACCTAAAATAGGCTGTCCTTTATGTGATAAATTATTGGGCTCTGTTTATCTCTCTTATAACCTCTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552925 72 - 90481686 atcAAACCTAAAATAGGCTGTCCTTTATGTGATAAATTATTGGGCTCTGTTTATCTCTCTTATAACCTCTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785331 72 + 3010529 ATCAAACCTAAAATAGGCTGTCCTTTATGTGATAAATTATTGGGCTCTGTTTATCTCTCTTATAACCTCTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897136 66 + 163208435 ATCAAACCTAAAATAGACTGTCCTTTATGTGATAAATTATTGGG--CTGTTTATCTCTCTTATAAC----CT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371662 72 - 74971481 atcAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGCTCTGTTTATCTCTCTTATAATCTCTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084262 72 - 78541002 atcAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGCTCTGTTTATCTCTCTTATAATCTCTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477006 72 + 26466322 ATCAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGCTCTGTTTATCTCTCTTATAATCTCTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804564 72 + 43916225 ATCAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGCTTTGTTTATCTCTCCTATAATCTCTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234758 72 + 75399963 ATCAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGCTCTGTTTATCTCTCTTATAATCTCTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795149 72 - 7209941 atcAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGctctgtttatctctcctataatctctct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537319 72 + 3907144 ATCAAACCTAAAATAGACTGTCCTTTATGTGATCAATTATTGGGCTCTGTTTATCTCTCTTATAACCTCTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541719 63 - 44557958 ATCAAACCTAAAATAGACTGTCCTTTGTGTAATAAATTATTGGG--CTGTTTCTCTCTCTTATAA------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353284 58 + 6628207 ATCAAACCTA----ATACTGTCCTTTGTGTAATAAATTATTGGG--CTGTT--TATCTCTTATAAC------ i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9292018 64 - 10531588 ATCAAACCTAAAACAGACTGTCCTTTGTGTAATAAATTATTGGG--CTGTTTATCTCTCTTATAAC------ i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2948825 67 + 9850184 ATCAAACCTGAAATAGTCTGTCC-TTACGTTATAAATTAAGGCGCTGTGTT----TCTCTTATAATCTCTCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13714054 56 + 13852661 aacaaaCCTGAAATAAACTGTTC------TTATACATTACTGGGTTCTGTT----TCCCTGTTACG------ i otoGar3.GL873566 I 264 C 0 s canFam3.chr5 80472569 55 + 88915250 AGCAAACCTGAAACAGGCTGTCCTTTCTGTTATAGTTT--------TGGTCTTTCTCTATTAC--------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929779 61 + 1009443 ---AAACCTGAAACAGGCTGTCCTTTAGGTTTTAAATTATCAGTCTCCATTCATCTATTTTATT-------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54940521 473 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=3354865.000000 s hg38.chr16_GL383557v1_alt 59520 249 + 89672 CTCTCTGTTAATTCTCCCCCCAAACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGAGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCAAGATGTTATCAGAACCCACACACTTCTCTGCCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacaaaaaccacacaaacTGGGTTTACGCAGGCATGCAACAGAATACATCCC--GAGAAGGGAAAGAAATCTA s panTro5.chr16 21491014 249 - 81586097 CTCTCTGTTAATTCTCCCCCCAAACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATGGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTTATCAGAACCCACACACTTCTCTGCCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacaaaaaccacacaaacTGGGTTTACGCAGGCATGCAACAGAATACATCCC--GAGAAGGGAAAGAAATCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21552997 249 - 90481686 CTCTCTGTTAATTCTCCCCCCAAACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTTATCAGAACCCACACACTTCTCTGCCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacaaaaaccacacaaacTGGGTTTACGCAGGCATGCAACAGAATACATCCC--GAGAAGGGAAAGAAATCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785403 249 + 3010529 CTCTCTGTTAATTCTCCCCCCAAACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATAGAGGGTGGGGCTAATCATAGC---AAAATGTCTTTCACCAACCCTTCATTCATGATGTCATCAGAACCCACACACTTCTCTGCCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacgaaaaccacacaaacTGGGTTTACGCAGGCATGCAACAGAATACATCCC--GAGAAGGGAAAGAAATCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897202 249 + 163208435 CTCTCTGTTAATTCTCCCCCCAAACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCGACCCTTCATTCATGATGTCATCAGAACCCACACACTCCTCTGCCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacaaaaaccacaccaacTGGGTTTACACAGGCATGCAACAGAATACATCCC--AAGAAGGGAAAGAAATCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371734 249 - 74971481 CTCTCTGTTAATTCTCCCCCCCTACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTCACCAGAACCCACACACTTCTCTGCCCACACTTCAGCCGTCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACGGGCATGCAACAGAATACATCCC--GAGACGGGAAAGAAATCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084334 249 - 78541002 CTCTCTGTTAATTCTCCCCCCCTACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTCACCAGAACCCACACACTTCTCTGCCCACACTTCAGCCGTCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACGGGCATGCAACAGAATACATCCC--GAGACGGGAAAGAAATCTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477078 249 + 26466322 CTCTCTGTTAATTCTCCCCCCCTACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTCACCAGAACCCACACACTTCTCTGCCCACACTTCAGCCGTCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACGGGCATGCAACAGAATACATCCC--GAGACGGGAAAGAAATCTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804636 249 + 43916225 CTCTCTGTTAATTCTCCCCCCCTACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTTATGATGTCACCAGAACCCACACACTTCTCTACCCACACTTCAGCCATCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACAGGCATGCAACAGAATACATCCC--GAGACGGGAAAGAAATCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58234830 249 + 75399963 CTCTCTGTTAATTCTCCCCCCCTACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTCACCAGAACCCACACACTTCTCTACCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACGGGCATGCAACAGAATACATCCC--CAGTCAGGAAAGAAATCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795221 249 - 7209941 ctctctgttcattctccccctctacatctatctTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACCCTTCATTCATGATGTCACCAGAACCCACACACTTCTCTACCCACACTTCAGCCGTCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACGGGCATGCAACAGAATACATCCC--GAGACAGGAAAGAAATCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537391 249 + 3907144 CTCTCTGTTAATTCTCCCGCCCTACATCTACCTTAAATCCT--C--ATTTATTTTCCCTTTCCAGAATGGAGGGTGGGGCTAATCATAGC---AAAATGTTTTTCACCAACTATTCATTCATGATGTCACCAGAACCCACACACTTCTCTACCCACACTTCAGCCCTCCATCCCCAaaacaaacaaacaaaaagcacacatacTGGGTTTCCACAGGCATGCAACAGAATACATCCC--GAGACGGGAAAGAAATCTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21541782 239 - 44557958 ---TCTGTTAATTCTCCCCTCACACATCTACCTTAAATCCT--C------ATTTTCCCTTTCCAGAATGAAAGGTGGGGCTAATCATACC---AAAATGTTTTTCATCAGCCCTTCATTCATGATGTCATCAGAACCCACACTCTTCTCTGCCCACACTCCAGCCCTCCATCCCCAAAACAAACA-----AAACCACACATACTGGATTTACACAGGCATGCAACAGAATACATCCCCTGAGTTGGGAAAGAAATCTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353342 252 + 6628207 CTCTCTGTTAATTCTCCCCTCACACATCTACCTTAAATCCT--CGAATTTATTTTCCCTTTCCAGAATGAAGGGTGGGGCTAATCATACC---AAAATGTTTTTCATCAGCCCTTCATTCAAGATATCATCAGAACCTACACACTTCTCTGCCCACACTCCAGCCCTCCATCCCCAAAACAAACAAACG-AAATCACACATACTGGATTTCCACAGGCATGCAACAGAATATGTCCCCTGAGATGGGAAAGAAATCTA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9292082 244 - 10531588 CTCTCTGTTAATTCTCCCCTCACACATCTACCTTAAATCCT--C------ATTTTCCCTTTCCAGAATGAAGGGTGGGGCTAATCATATC---AAAATGTTTTTCATCAGCCCTTCATTCATGATGTCATCAGAACCCACACACTTCTCTGCCCACACTCCAGCCCTCCATCCCCAAAACAAACAAACA-AAACCACACATACTGGATTTCTACGGGCATGCAACGGAATACATCCC--AAGATGGGAAATAAATCTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54940994 247 + 72247402 CTCTCTGTTAATTCTTCTCCCATACATCTACCTTAAATTTT--C--ATTTAGTTCCCCTTTCCAGATTGAAGGGTGGGGTTCATCCTAGC--AAAAATGTTTTTCACCAGTACTTCATACGTGATGTCATCAGAACCCACATAATTCTCTGTCCATACCTAAGCCTGCCATCCAACAAACAAACA-----AAACCACACATACTGGGTTTCCACAGGCTTGCAAAAGAATACATCCAGTGAGATGGGAAAGAAATCTA i micMur3.chr20 I 473 I 8 s proCoq1.NW_012152729v1 2948892 242 + 9850184 -----TGTTAATTCTTCTCCCATATATCTACCTTAAACTCT--C--ATTTAGTTCCCCTTTCCAGATTGAAGGGTGGGGTTCATCCCAGC--AAAAATGTTTTTCACCAGTACTTCATACACTATGTCATCAGAATCCACATAATTCTCTGTCCATACCTAAGCCTGCCATGCAAAAAACAAACA-----AAACCACACATACTGGGTTTCCACAGGCATGCAACAGAATACATCCACTGAGATGGGAAAGAAATCTA i proCoq1.NW_012152729v1 C 0 I 378 s otoGar3.GL873566 13714110 230 + 13852661 -----------CTCTTTTTT------GTTACCTTAAATTCT--C--ATGTATTTTCCCTTTCCAGACTGAAGGATGGGATTCATCCTAGC--AAAAATGTTTTTCACCAGTACTTCATACATGAGGTCATCAGAACCTCTGTAGTTCTCTGTCCACACCTCAGCCTGCCCGCCCCCAAACAAACA-----AAACCACATACACTGGGTTTCCACAGGCATGCAACAGAATACATCCACTAAGATGGGAAAGAAATCTA i otoGar3.GL873566 C 0 I 8 s canFam3.chr5 80472624 244 + 88915250 --CTCTGTTAATTCTCTTCCCATGTATCTACTTTAAATTCT--C--ACTTATTTACCCTTTCCAGACTGGAGGATGGGGTTCATCTTAGCAAAAAAATTTTTTTTGCTAGCATTTTACTC---ATGTCACCAGAACCCATATCCTTCTCTGCTTATACCATGGCCCTTCATCCCCCAAACAAACA-----AAACCACACATACTGGGTTTCCACAAGCATGCAACATAATACATTCATTGAGATGGGAAAGAAATTGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 929840 252 + 1009443 TCCCCTGTTAATTCTCATCTCACACATCTACCTTGAATTCTTAC--ATTTACTTTCTCTTTCCAGATTGGAGAGTGGGGTTCATCTTAGC----TATGGTTTCTTACCAGCACTTCGGTCATGATGTCATCAGAACCTACATGCTTCTCTGCTTATACTATGGCCCTCCATCTAAAAAACAATCAAATTAAAACCCCATATACTGGGTTTCCACAGGAATGCAACAGAATACATACACTGAGGCGGGAAAGAAATCTC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=271649.000000 s hg38.chr16_GL383557v1_alt 59769 22 + 89672 TCTGCTCAGTTTA-GTTAACTAG s panTro5.chr16 21491263 22 - 81586097 TCTGCTCAGTTTA-GTTAACTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553246 22 - 90481686 TCTGCTCAGTTTA-GTTAACTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785652 22 + 3010529 TCTGCTCAGTTTA-GTTAACTAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897451 22 + 163208435 TCTGCTCAGTTCA-GTTAACTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21371983 22 - 74971481 TCTGCTCAGTTCA-GTTAACTAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084583 22 - 78541002 TCTGCTCAGTTCA-GTTAACTAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477327 22 + 26466322 TCTGCTCAGTTCA-GTTAACTAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804885 22 + 43916225 TCTGCTCAGTTCA-GTTAACTAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235079 22 + 75399963 TCTGCTCAGTTCA-GTTAACTAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795470 22 - 7209941 TCTGCTCAGTTCA-GTTAACCAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537640 22 + 3907144 TCTGCTCAGTTCA-GTTAACTAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542021 23 - 44557958 TCTGCTCAGTTAAGGTTAACTAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353594 23 + 6628207 TCTGCTCAGTTAAGGTTAACTAG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9292326 23 - 10531588 TCTGCTCAGTTAAGGTTAACTAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54941249 23 + 72247402 TCTGCTTAGTTCAGGTTAACTAT i micMur3.chr20 I 8 C 0 s otoGar3.GL873566 13714348 23 + 13852661 TCTGATCAGTTCAGATTAACTAC i otoGar3.GL873566 I 8 C 0 s canFam3.chr5 80472868 23 + 88915250 TCTGCTCGGTTCAGGTTCACTAG i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 930092 23 + 1009443 TTTGCTTGGTTCAGGTTAACTAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949134 378 + 9850184 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=1044303.000000 s hg38.chr16_GL383557v1_alt 59791 77 + 89672 AGTTCTTCACTTTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAATAACAATGTCAGAG s panTro5.chr16 21491285 77 - 81586097 AGTTCTTCACTTTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGACAACACACGTGGGAATAACAATGTCAGAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553268 77 - 90481686 AGTTCTTCACTTTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGACAACACACGTGGGAATAACAATGTCAGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785674 77 + 3010529 AGTTCTTCACTTTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAATAACAATGTCAGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897473 77 + 163208435 AGTTCTTCACTTTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAATAACAATGTCAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372005 77 - 74971481 AGTTCTTCACTTTGTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAGTAACAATGTCAGAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084605 77 - 78541002 AGTTCTTCACTTTGTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAGTAACAATGTCAGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477349 77 + 26466322 AGTTCTTCACTTTGTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAGTAACAATGTCAGAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804907 77 + 43916225 AGTTCTTCACTTTGTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAGTAACAATGTCAGAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235101 77 + 75399963 AGTTCTTCACTTTGTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGCAGTAACAATGTCAGAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795492 77 - 7209941 AGTTCTTCACTTTGTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAGTAACAATGTCAGAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537662 77 + 3907144 AGTTCTTCACTTTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAACACACGTGGGAGTAACAATGTCAGAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542044 77 - 44557958 AGTTCTTCACTCTCTAATTT-AAAGATCACATTAAAACTGGCCAGTTGATAATACTCATGAGATTAACAATGTCAGAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353617 73 + 6628207 AGTTCTTCA----CTAATTT-AAAGATCACAGTAAAACTGGCCAGTTGATAACACTTACGGGATTAACAATGTCAGAG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9292349 77 - 10531588 AGTTCTTCACTCTCTAGTTT-AAAGATCACATTAAAACTGCCCAGGTGATAACACTCATGGGATTAACAATGTCAGAG i aotNan1.NW_018500622v1 C 0 I 153 s micMur3.chr20 54941272 77 + 72247402 AATTCTTTACTTTCTAATTT-AAAGATCATATTAAAACTGGTTAGTTAATAACACTCATGGGAATAACAATGTTAAAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2949512 77 + 9850184 AGTTCTTCACTGTCTAATTT-AAAGATCACATTAAAACTGGTCAGTTAATAACACTCATGGGAATAACAATGTTAAAG i proCoq1.NW_012152729v1 I 378 C 0 s otoGar3.GL873566 13714371 76 + 13852661 AGTTCCTCACTTTCTAGTTT-AACAATCACATTAAAA-TGGTCAGTTGATAACGCTCAGGGGAATAACAATGTTTAAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80472892 69 + 88915250 GGTTCTTCATCTTCTAATTTAAAAGATTACATTAAAACTAGTCAGTTGATAACACCCATGGGAATAATG--------- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 930115 71 + 1009443 AGTTCTTCACTTTCTAACTTAAAAGATCATATTAAAGCAAGTTACCTAGT-------GGAGGGGGCAGAAAGTCAAAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=137120.000000 s hg38.chr16_GL383557v1_alt 59868 11 + 89672 CAGGTAGAAGA s panTro5.chr16 21491362 11 - 81586097 CAGGTAGAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553345 11 - 90481686 CAGGTAGAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785751 10 + 3010529 CAGGTAG-GGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897550 11 + 163208435 CAGGTAGAAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372082 11 - 74971481 CAGGTAGAAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084682 11 - 78541002 CAGGTAGAAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477426 11 + 26466322 CAGGTAGAAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804984 11 + 43916225 CAGGTAGAAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235178 11 + 75399963 CAGGTAGAAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795569 11 - 7209941 CAGGTAGAAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537739 11 + 3907144 CAGGTAGAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542121 11 - 44557958 AAGGTAGAAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6353690 11 + 6628207 CAGGTAGAAGA i saiBol1.JH378225 C 0 C 0 s micMur3.chr20 54941349 11 + 72247402 CAGGTAGAAGA i micMur3.chr20 C 0 I 497 s proCoq1.NW_012152729v1 2949589 11 + 9850184 CAGGTAGAAGA i proCoq1.NW_012152729v1 C 0 I 498 s otoGar3.GL873566 13714447 11 + 13852661 CAGGTAAAGGA i otoGar3.GL873566 C 0 I 7 s dasNov3.JH569970 930186 11 + 1009443 CAGGTGGAAGA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80472961 0 + 88915250 C e mm10.chr8 22476672 988 - 129401213 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=834055.000000 s hg38.chr16_GL383557v1_alt 59879 119 + 89672 GAATGAAAAATGTGA---AATACATGGTGGGCTCTCGGGTCCCCATCTCTACTCTT-AATCCCTA-------ACAAAATTCCT---G-CCCAGTGTTTCCTTACCCttttttt-------tttttttttttttaaagagac s panTro5.chr16 21491373 119 - 81586097 GAATGAAAAATGTGA---AATACATGGTGGGCTCTCGGGTCCCCATCTCTACTCTT-AATCCCTA-------ACAAAATTCCT---G-CCCAGTGTTTCCTTACCTttttttt-------tttttttttttttaaagagac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553356 115 - 90481686 GAATGAAAAATGTGA---AATACATGGTGGGCTCTCGGGTCCCCATCTCTACTCTT-AATCCCTA-------ACAAAATTCCT---G-CCCAGTGTTTCCTTACC----tttt-------tttttttttttttaaagagac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785761 111 + 3010529 GAATGAAAAATGTGA---AATACATGGTGGGCTCTCGGGTCCCCATCTCTACTCTT-AATCCCTA-------ACAAAATTCCT---G-CCCAGTGTTTCCTTACC---------------ttttttttttttaaaagagac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897561 117 + 163208435 GAATGAAAAATGTGA---AATACATGGTGGGCTCTTGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCCAGTGTTTCCTTACC--tttttt-------tttttttttttttaaagagac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372093 110 - 74971481 GAATGAAAAATGTGA---AATACATGGTAGGCTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCC---------tttt-------tttttttcttttttaagagac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084693 110 - 78541002 TAATGAAAAATGTGA---AATACATGGTAGGCTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCC---------tttt-------tttttttcttttttaagagac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477437 109 + 26466322 GAATGAAAAATGTGA---AATACATGGTAGGTTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCC----------ttt-------tttttttcttttttaagagac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20804995 110 + 43916225 GAATGAAAAATGTGA---AATACATGGTAGGCTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCC---------tttt-------tttttttcttttttaagagac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235189 109 + 75399963 GAATGAAAAATGTGA---AATACATGGTAGGCTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCC----------ttt-------tttttttcttttttaagagac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795580 111 - 7209941 GAATGAAAAATGTGA---AATACATGGTAGGCTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCCt--------tttt-------tttttttcttttctaagagac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537750 108 + 3907144 GAATGAAAAATGTGA---AATACATGGTAGGCTCTCGGGTCCCCACCTCTACTCTT-ACTCCCTA-------ACAAAATTCCT---G-CCTAGTGTTTCC-----------TC-------ACTAttttttttttaagagac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542132 107 - 44557958 GAACAGAAAATATGA---AATATACGGTGGGCTCTCTGGTTCCCACCTCTACTCTTAACTCCCTA-------ACAAAATTCCT---A-CCCAGTACTTCC---------TTTT-------TTGTTTTTT----AAAGAGAC i calJac3.chr20 C 0 I 593 s saiBol1.JH378225 6353701 112 + 6628207 GAACAGAAAATATGA---AATACACGGTGGGCTCTCTGGTTCCCACCTCTACTCTTAACTCCTTA-------ACAAAATTCCT---ACCCCAATGCttcc---------tttt-------ttttttttttttaaaagagac i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13714465 103 + 13852661 GAACAGGAAAGGTG-----ATCCTTGTTTGGCTCACGGGTCCTAACCTCCACTCCT-TTTCCCTA-------ACAAAA-TCCT---G-TCCAGTGCCTCC---------TTAT-------TTATCTGCCTATTTATT---- i otoGar3.GL873566 I 7 C 0 s canFam3.chr5 80472961 110 + 88915250 --------------------TATATGGTAGGCTTTCTGGTTCTGACCTCTACTCCt-attttttatttttttaaaatattttttaaa-tttattattatt---------ttttaaaaagattttatttatttatgagagac i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 930197 95 + 1009443 GGGCAGAGAAGGTGAATGAATATACAGCAGGCTCTCTGATCTCCACTGCTACTTCT-ACTCCCTA-------A-AAAAGCCCT---G-CCCAATGTTTCC---------TCGA-------CTTC----------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=41888.000000 s hg38.chr16_GL383557v1_alt 59998 8 + 89672 agggtctc s panTro5.chr16 21491492 8 - 81586097 agggtctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553471 8 - 90481686 agggtctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785872 8 + 3010529 agggtctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897678 7 + 163208435 agggtct- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372203 7 - 74971481 agggtct- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084803 7 - 78541002 agggtct- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477546 7 + 26466322 agggtct- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805105 7 + 43916225 agagtct- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235298 7 + 75399963 agggtct- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795691 7 - 7209941 agggtct- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537858 7 + 3907144 agggtct- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542832 7 - 44557958 agggtct- i calJac3.chr20 I 593 I 1 s saiBol1.JH378225 6353813 7 + 6628207 agggtct- i saiBol1.JH378225 C 0 I 308 s otoGar3.GL873566 13714568 5 + 13852661 --ggtct- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80473073 6 + 88915250 agagat-- i canFam3.chr5 I 2 C 0 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930292 0 + 1009443 C e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=11901.000000 s hg38.chr16_GL383557v1_alt 60006 4 + 89672 acac s panTro5.chr16 21491500 4 - 81586097 acac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553479 4 - 90481686 acac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785880 4 + 3010529 acac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897685 3 + 163208435 -cac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372210 3 - 74971481 -tac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084810 3 - 78541002 -tac i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477553 3 + 26466322 -tac i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805112 3 + 43916225 -tac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235305 3 + 75399963 -tac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795698 3 - 7209941 -tac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537865 3 + 3907144 -tac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542840 2 - 44557958 --ac i calJac3.chr20 I 1 C 0 s otoGar3.GL873566 13714573 3 + 13852661 -tgc i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80473079 2 + 88915250 --ac i canFam3.chr5 C 0 I 1 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930292 0 + 1009443 C e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I e saiBol1.JH378225 6353820 308 + 6628207 I a score=270053.000000 s hg38.chr16_GL383557v1_alt 60010 38 + 89672 tatgttgcccaggctggag---------tgcagtggctatt----caccag s panTro5.chr16 21491504 38 - 81586097 tatgttgcccaggctggag---------tgcaatggctatt----caccag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553483 38 - 90481686 tatgttgcccaggctggag---------tgcagtggctatt----caccag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785884 38 + 3010529 tatgttgcccaggctggag---------tgcagtggctact----caccag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897688 28 + 163208435 tatgttgcccaggctggag---------tgcagtggc-------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372213 38 - 74971481 tatgttgcccaggctagag---------tgcagtggctatt----cacccg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084813 38 - 78541002 tatgttgcccaggctagag---------tgcagtggctatt----cacccg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477556 38 + 26466322 tatgttgcccaggctagag---------tgcagtggctatt----cacccg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805115 38 + 43916225 tatgttgcccaggctagag---------tgcagtggctatt----cacctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235308 38 + 75399963 tatgttgcccaggctggag---------tgcagtgactatt----cacccg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795701 38 - 7209941 tatgttgcccaggctagag---------tgcagtggctatt----cacccg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537868 38 + 3907144 tatgttgcccaggctggag---------tgctgtggctatt----caccag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542842 38 - 44557958 tatgttgcccaggctgaag---------tgcagtggctatc----tgcggg i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6354128 38 + 6628207 tatgttgcccaggctgaag---------tgcagtggctatc----tgcagg i saiBol1.JH378225 I 308 I 2 s otoGar3.GL873566 13714576 38 + 13852661 tactttgctcaggctggtg---------tgcagtggatatt----cacaga i otoGar3.GL873566 C 0 I 2 s canFam3.chr5 80473082 44 + 88915250 -----ggcagagggagaagcaggctccatgcagagcctgatgtgggact-- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 930292 19 + 1009443 ----------------------------TGTAATTGCTGTG----CAACAG i dasNov3.JH569970 C 0 I 41 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I a score=1336.000000 s hg38.chr16_GL383557v1_alt 60048 2 + 89672 ta s panTro5.chr16 21491542 2 - 81586097 ta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553521 2 - 90481686 ta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785922 2 + 3010529 ta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897716 1 + 163208435 -a i nomLeu3.chr2 C 0 C 0 e canFam3.chr5 80473126 0 + 88915250 C e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930311 41 + 1009443 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e cebCap1.NW_016107433v1 3336821 1460 - 5917169 I e macNem1.NW_012011355v1 14477594 0 + 26466322 C e rheMac8.chr20 21372251 0 - 74971481 C e macFas5.chr20 21084851 0 - 78541002 C e colAng1.NW_012123265v1 537906 0 + 3907144 C e manLeu1.NW_012101698v1 6795739 0 - 7209941 C e chlSab2.chr5 58235346 0 + 75399963 C e cerAty1.NW_011999143v1 20805153 0 + 43916225 C e saiBol1.JH378225 6354166 2 + 6628207 I e calJac3.chr20 21542880 2 - 44557958 I e otoGar3.GL873566 13714614 2 + 13852661 I a score=495159.000000 s hg38.chr16_GL383557v1_alt 60050 66 + 89672 tgatcatagca-----cactatggtctcaagctcctgggct----------------cca--------------c-------------tgagcctctcgagtagctgggactac----------------------------------------------------------------------------- s panTro5.chr16 21491544 66 - 81586097 tgatcatagca-----cactatggtctcaagctcctgggct----------------cca--------------g-------------tgagcctcccgagtagctgggactac----------------------------------------------------------------------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553523 66 - 90481686 tgatcatagca-----cactatggtctcaagctcctgggct----------------cca--------------g-------------tgagcctcccgagtagctgggactac----------------------------------------------------------------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785924 65 + 3010529 tgatcatagca-----cactatggtctcaagctcctgggct----------------cca--------------g-------------tgagcctc-cgagtagctgggactac----------------------------------------------------------------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897717 80 + 163208435 cgatctcggct-----cactgcaggctccaccccctggggt----------------tcacaccattctcctgcc-------------tcagcctcccaagtagctgggactac----------------------------------------------------------------------------- i nomLeu3.chr2 C 0 I 158 s rheMac8.chr20 21372251 66 - 74971481 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatcctcccgagtagttgggactac----------------------------------------------------------------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084851 66 - 78541002 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatcctcccgagtagttgggactac----------------------------------------------------------------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477594 66 + 26466322 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatcctcccgagtagttgggactac----------------------------------------------------------------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805153 66 + 43916225 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatcctcctgagtagttgggactac----------------------------------------------------------------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235346 66 + 75399963 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatcctcccaagtacttgggactac----------------------------------------------------------------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795739 66 - 7209941 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatcctcccgagtagttgggactac----------------------------------------------------------------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 537906 66 + 3907144 tgatcatagca-----cattatggtctcaaactcctgagct----------------cca--------------g-------------tgatccccccaagtagttgggactac----------------------------------------------------------------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542882 66 - 44557958 tgatcacagga-----cactatagtctcaaactcctgggct----------------cca--------------g-------------taagcctcccaggtagttgggactac----------------------------------------------------------------------------- i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6354168 66 + 6628207 tgatcatagga-----cactatagtctcaaactcctgggct----------------cca--------------g-------------taagcctccccggtagctgggactat----------------------------------------------------------------------------- i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3338281 66 - 5917169 TGATCATATGA-----cactatagtctcaatctcctgggct----------------cca--------------g-------------taagcctcccgggtagctgggactac----------------------------------------------------------------------------- i cebCap1.NW_016107433v1 I 1460 C 0 s otoGar3.GL873566 13714616 81 + 13852661 tgaccatggcatagctcactgcagccacta-ctcctgggct----------------caa--------------ggaaccctcctgcctcagtctcctgagtag--aggactac----------------------------------------------------------------------------- i otoGar3.GL873566 I 2 I 3332 s canFam3.chr5 80473126 156 + 88915250 caatcctggga-----ccccaggatcaca---ccctgggccaaaggcaggcactaaaccg--------------c-------------tgagccacccagggatcccagattttatttattttttcatgagagagacagagagagaggcagagacacaggcagagggagaagcaggcccatgcagggaacc i canFam3.chr5 C 0 C 0 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930311 41 + 1009443 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I a score=158052.000000 s hg38.chr16_GL383557v1_alt 60116 31 + 89672 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- s panTro5.chr16 21491610 31 - 81586097 tgatgtgtgcccagctcctatatc--t-----------------------------------------------------------tttttt--- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553589 30 - 90481686 tgatgtgtgcccagctcctatatc--------------------------------------------------------------tttttt--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 785989 30 + 3010529 tgatgtgtgcccagctcctatatc--------------------------------------------------------------tttttt--- i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21372317 31 - 74971481 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21084917 31 - 78541002 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14477660 31 + 26466322 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20805219 31 + 43916225 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58235412 33 + 75399963 tgatgtgtgcctagctcctgtatcttt-----------------------------------------------------------tttttt--- i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6795805 31 - 7209941 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- i manLeu1.NW_012101698v1 C 0 I 1 s colAng1.NW_012123265v1 537972 31 + 3907144 tgatgtgtgcccagctcctgtatc--t-----------------------------------------------------------tttttt--- i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21542948 24 - 44557958 taatgtgtgcccagtttctatatc----------------------------------------------------------------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354234 24 + 6628207 tgatgtgtgcccagtttctgtatc----------------------------------------------------------------------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338347 24 - 5917169 tgatgtgtgcccagtttctatatc----------------------------------------------------------------------- i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80473282 93 + 88915250 caacgtgggactcgatcccgggtc--tccaggatcaggccctgggcagaaggtggcactaaaccgctgagccacccgggctgccTATTttttatt i canFam3.chr5 C 0 C 0 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930311 41 + 1009443 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e otoGar3.GL873566 13714697 3332 + 13852661 I e nomLeu3.chr2 53897797 158 + 163208435 I a score=67835.000000 s hg38.chr16_GL383557v1_alt 60147 14 + 89672 tcatattgtatttc s panTro5.chr16 21491641 14 - 81586097 tcatattgtatttc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553619 14 - 90481686 tcatattgtatttc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786019 14 + 3010529 tcatattgtatttc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897955 14 + 163208435 TCATATTGTGtttc i nomLeu3.chr2 I 158 C 0 s rheMac8.chr20 21372349 14 - 74971481 aaatattgtatttc i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21084949 14 - 78541002 aaatattgtatttc i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14477692 14 + 26466322 aaatattgtatttc i macNem1.NW_012011355v1 I 1 C 0 s cerAty1.NW_011999143v1 20805251 14 + 43916225 aaatattgtatttc i cerAty1.NW_011999143v1 I 1 C 0 s chlSab2.chr5 58235446 14 + 75399963 aaatattgtatttc i chlSab2.chr5 I 1 C 0 s manLeu1.NW_012101698v1 6795837 14 - 7209941 aaatattgtatttc i manLeu1.NW_012101698v1 I 1 C 0 s colAng1.NW_012123265v1 538004 14 + 3907144 aaatattgtatttc i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21542972 4 - 44557958 ----------tttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354258 2 + 6628207 ------------tt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338371 4 - 5917169 ----------tttt i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80473375 14 + 88915250 taaaattttttttt i canFam3.chr5 C 0 C 0 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930311 41 + 1009443 I e aotNan1.NW_018500622v1 9292426 153 - 10531588 I e otoGar3.GL873566 13714697 3332 + 13852661 I a score=1480301.000000 s hg38.chr16_GL383557v1_alt 60161 155 + 89672 --ttt---------------------------agggataggg------------------------------------tctccctatgttgcccgggttgg-------tctctggactcaag-gatgct----cccaccttggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccatgcctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------ACATAACAGGTAA------------------------------------------AAAGGCA s panTro5.chr16 21491655 156 - 81586097 --ttt---------------------------agggataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccaccttggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccatgcctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------ACATAACAGGTAA------------------------------------------AAAGGCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553633 156 - 90481686 --ttt---------------------------agggataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccaccttggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccatgcctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------ACATAACAGGTAA------------------------------------------AAAGGCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786033 156 + 3010529 --ttt---------------------------agggataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccatgcctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53897969 156 + 163208435 --ttt---------------------------agagataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcggcctcctaaaatgctgggaatacaggcatgagcca---------------------------------ccatgcctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372363 155 - 74971481 --ttt---------------------------agagataggt------------------------------------tatctctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcagcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccacgcctggtcCTTCCATA-CTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21084963 155 - 78541002 --ttt---------------------------agagataggt------------------------------------tatctctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccacgcctggtcCTTCCATA-CTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477706 155 + 26466322 --ttt---------------------------agagataggt------------------------------------tgtctctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccacgcctggtcCTTCCATA-CTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805265 155 + 43916225 --ttt---------------------------agagataggt------------------------------------tatctctatgttgcccaggttgg-------tctctggactcaagtgatggt----cccacctcggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccacgcctggtcCTTCCATA-CTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235460 155 + 75399963 --ttt---------------------------agagataggt------------------------------------tatctctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccaccttggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccacgcctggtcCTTCCATA-CTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6795851 155 - 7209941 --ttt---------------------------agagataggt------------------------------------tatctctatgttgcccaggttgg-------tctctggactcaagtgatgtt----cccacctcggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccacgcctggtcCTTCCATA-CTTTTGAAACCAGC----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538018 155 + 3907144 --ttc---------------------------agagataggt------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcggcctcctaaaatgctgggattacaggcatgagcca---------------------------------ccatgtctggccCTTCCATA-CTTTTGAAACCAGT----------------------------------------ATATAACAGGTAA------------------------------------------AAAGGCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21542976 160 - 44557958 --ttt---------------------------agaaataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgctcccacccaccccagcctcccaaagtgctgggattacaggcatgagcca---------------------------------ccatgtctggccCTTCTATACCTTTTGAAACCAGC----------------------------------------CTATAACAGATAA------------------------------------------AAAGACG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354260 156 + 6628207 --ttt---------------------------agagatagcg------------------------------------tctccctatgttgcccaggttgg-------tctcgggactcaagtgatgct----cccaccttagcctgccaaagtgctgggattacatgcatgagcca---------------------------------ccgtccctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------CTATAACCTATAA------------------------------------------AAAGACA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338375 156 - 5917169 --ttt---------------------------agagataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcagcctcccaaagtgcagggattacacgcatgagcca---------------------------------cagtgcctggccCTTCCATACCTTTTGAAACCAGC----------------------------------------CTATAACCGATAA------------------------------------------AAAGACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292579 156 - 10531588 --ttt---------------------------agagataggg------------------------------------tctccctatgttgcccaggttgg-------tctctggactcaagtgatgct----cccacctcagcctcccaaagtgctgggattacaggcatgagcca---------------------------------ccgtgcccagccCTTCCATACCTTTTGAAACCAGC----------------------------------------CTGTAACAGATAA------------------------------------------AAAGACA i aotNan1.NW_018500622v1 I 153 C 0 s canFam3.chr5 80473389 335 + 88915250 tatttatccatgagagacacagagagagagagagagacagagagaaacagagacacacaggcagagggagcagcagactccatgcagggagcccaatgtgggactcgatcctgggactccag----gat----catgccttgagcc----aaaggcaggggctaaactactgagccatccaggcgtcGCATCTACTACTATTGACAAAATCCCTGCCCAGTGTTTTTTTCATCTTTGAAATGGGCACGtatatatgtgtatatgctatttatacattaatgtaatatataacatattaaatatatatattatatatgttactatatttatttatCAGGTGAAAGGTG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54941360 497 + 72247402 I e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930311 41 + 1009443 I e otoGar3.GL873566 13714697 3332 + 13852661 I a score=97478.000000 s hg38.chr16_GL383557v1_alt 60316 9 + 89672 GTTAATGGG s panTro5.chr16 21491811 9 - 81586097 GTTAATGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553789 9 - 90481686 GTTAATGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786189 9 + 3010529 GTTAATGGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898125 9 + 163208435 GTAAATGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372518 9 - 74971481 GTTAATGGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085118 9 - 78541002 GTTAATGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477861 9 + 26466322 GTTAATGGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805420 9 + 43916225 GTTAATGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235615 9 + 75399963 GTTAATGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796006 9 - 7209941 GTTAATGGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538173 9 + 3907144 GTTAATGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543136 9 - 44557958 GTGAATGTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354416 9 + 6628207 GTGAAAGGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338531 9 - 5917169 GTGAACGGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292735 9 - 10531588 GTGAATGGC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54941857 9 + 72247402 GTTAATGGA i micMur3.chr20 I 497 C 0 s canFam3.chr5 80473724 9 + 88915250 ATTAATGAG i canFam3.chr5 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I e proCoq1.NW_012152729v1 2949600 498 + 9850184 I e dasNov3.JH569970 930311 41 + 1009443 I e otoGar3.GL873566 13714697 3332 + 13852661 I a score=175782.000000 s hg38.chr16_GL383557v1_alt 60325 15 + 89672 ACTGATAACCCAA------GC s panTro5.chr16 21491820 15 - 81586097 ACTGATAACCCAA------GC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553798 15 - 90481686 ACTGATAACCAAA------GC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786198 15 + 3010529 ACGGATAACCCAA------GC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898134 15 + 163208435 ACTGATAATCCAA------GC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372527 15 - 74971481 GCTGATAACCCAA------GC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085127 15 - 78541002 GCTGATAACCCAA------GC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477870 15 + 26466322 GCTGATAACCCAA------GC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805429 15 + 43916225 GCTGATAACCCAA------GC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235624 15 + 75399963 GCTGACAACCCAA------GC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796015 15 - 7209941 GCTGATAACCCAA------GC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538182 15 + 3907144 GCTGATAACCCGA------GC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543145 15 - 44557958 ACTGATAACCCAA------GC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354425 15 + 6628207 ACTGATAACCCAA------GC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338540 15 - 5917169 ACTGATAACCCAA------GC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292744 15 - 10531588 ACTGATGACCCAA------GC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54941866 15 + 72247402 ACGGGTAACTCAA------GA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2950098 15 + 9850184 ACTGGTAACTCAA------GA i proCoq1.NW_012152729v1 I 498 C 0 s canFam3.chr5 80473733 21 + 88915250 ATTGATCACTCAAAGCTGGAT i canFam3.chr5 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I e dasNov3.JH569970 930311 41 + 1009443 I e otoGar3.GL873566 13714697 3332 + 13852661 I a score=84155.000000 s hg38.chr16_GL383557v1_alt 60340 13 + 89672 TTTTTTTA-CTTTT s panTro5.chr16 21491835 3 - 81586097 TTT----------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553813 3 - 90481686 TTT----------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786213 13 + 3010529 TTTTTTTA-CTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898149 13 + 163208435 TTTTTTTC-CTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372542 13 - 74971481 TTCTTTTC-CTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085142 13 - 78541002 TTCTTTTC-CTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477885 13 + 26466322 TTCTTTTC-CTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805444 13 + 43916225 TTCTTTTC-CTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235639 13 + 75399963 TTCTTTTC-CTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796030 13 - 7209941 TTCTTTTC-CTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538197 13 + 3907144 TTCTTTTC-TTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543160 13 - 44557958 TTTTTTGC-CTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354440 13 + 6628207 TTTTTTGC-CTTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338555 13 - 5917169 TTTTTTGC-CTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292759 13 - 10531588 TGTTTTGC-CTTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54941881 14 + 72247402 CTTTTTTTCCTTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2950113 13 + 9850184 CTTTTTTT-CTTTT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80473754 13 + 88915250 TTTTTTTC-CCTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930352 8 + 1009443 TTTTTTTA------ i dasNov3.JH569970 I 41 C 0 e mm10.chr8 22476672 988 - 129401213 I e otoGar3.GL873566 13714697 3332 + 13852661 I a score=720006.000000 s hg38.chr16_GL383557v1_alt 60353 49 + 89672 AAATAAAATTAACGG-CTGACTGTCAAAGGTCAAAGGCATC-TATTTTTTA s panTro5.chr16 21491838 49 - 81586097 AAAAAAAATTAACGG-CTGACTGTCAAAGGTCAAAGGCATC-TATTTTTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553816 49 - 90481686 AAAAAAAATTAACGG-CTGACTGTCAAAGGTCAAAGGCATC-TATTTTTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786226 45 + 3010529 AAATAAAATTAACGG-----CTGTCAAAGGTCAAAGGCATC-TATTTTTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898162 49 + 163208435 AAATAAAATTAACGG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372555 49 - 74971481 AAATAAAATTAACCG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085155 49 - 78541002 AAATAAAATTAACCG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477898 49 + 26466322 AAATAAAATTAACCG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805457 49 + 43916225 AAATAAAATTAACCG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235652 49 + 75399963 AAATAAAATTAACCG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796043 49 - 7209941 AAATAAAATTAACCG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538210 49 + 3907144 AAATAAAATTAATGG-CTGACTGCCAAAGGTCAAAGGCATC-TATTTTTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543173 49 - 44557958 ACATAAAATTAACCA-CTGACTGCCAAAGGTCAAAGGCATC-TAATTTTTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354453 49 + 6628207 ACATAAAATTAACCA-CTGACTGCCAAAGGTCAAAGGCATC-TAATTTTTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338568 49 - 5917169 ACATAAAATTAATCA-CTGACTGCCAAAGGTCAAAGGCATC-TAATTTTTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292772 49 - 10531588 ACATAAAATTAACCA-CTGACTGCCAAAGGTCAAAGGCATC-TAATTTTTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54941895 48 + 72247402 -AAAAAAATTAACTG-CTGACCCTCAAAGGTCGAAGGCATC-TGTTTGTTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2950126 48 + 9850184 -AAAAAAATTAACAC-CTGACTGCCAAAGGTTGAAGGCATC-TATTTGTTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13718029 50 + 13852661 aaaaaaaaTTAACAG-CTGACTAAGAAAGGTCAAAGGCATCTTATCTGTTA i otoGar3.GL873566 I 3332 C 0 s canFam3.chr5 80473767 50 + 88915250 AAATAAAATAAATAGTCTGACTGCCAGAGGCGAAAGGCATC-AATTTTTGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930360 48 + 1009443 AAACAAAATTAATAG-CTAACTACCAAAACCCAAA-GCATT-TATTATTCA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22476672 988 - 129401213 I a score=1079961.000000 s hg38.chr16_GL383557v1_alt 60402 76 + 89672 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTATGGTTATTAGTGGTC s panTro5.chr16 21491887 67 - 81586097 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTA---------GTGGTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553865 67 - 90481686 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTA---------GTGGTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786271 76 + 3010529 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTATGGTTATTAGTGGTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898211 76 + 163208435 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTATGGTTATTAGTGGTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372604 77 - 74971481 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTCTTAAGGCTGATTATGGTTATTAGTGGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085204 77 - 78541002 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTCTTAAGGCTGATTATGGTTATTAGTGGTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14477947 77 + 26466322 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTCTTAAGGCTGATTATGGTTATTAGTGGTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805506 76 + 43916225 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTAATTATGGTTATTAGTGGTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235701 76 + 75399963 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTATGGTTATTAGTGGTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796092 76 - 7209941 GATGGAGCA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGATTATGGTTATTAGTGGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538259 76 + 3907144 GATGGAACA-----CTCCCTTATAATGCTGGAGTTGAAATTCTTCCTTGAACTC-TAAGGCTGACTATGGTTATTAGTGGTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543222 76 - 44557958 GATGGAGCA-----CTCTCTTATAATGCTATAGTTGAAATTCTTCCCTGAACAC-TAAGGCTGATTATGGTTATTAGTGGTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354502 76 + 6628207 GATGGAGCA-----CTCTTTTATAATGCTACAGTTGAAATTCTTCTTCGAACAC-TAAGGCTGATTACGGTTATTAGTGGTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338617 76 - 5917169 GATGGAGCA-----CTCTCTTATAATGCTATAGTTGAAATTCTTCCTTGAACAT-TAAAGCTGATTATGGTTATTAGTGGTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292821 76 - 10531588 GATGGAGCA-----CTCTCTTATAATGCTATAGTTGAAATTCTTCCTTGAACAC-TAAGGCTGATTATGGTTATTAGTGGTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54941943 78 + 72247402 GGTGGCACA-TTCCGTCCCTTATAATGCTGCAGTTGAA-TTCTTCCTTGAACCC-TGAGTCTGAGCATGGCTATTAGTGTC- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2950174 80 + 9850184 GATGGAGCACTCCCCTCCCTTATAATGCTGCAGCTGAA-TTCTTTCTTGAACTC-TGAGTCTGACCATGACTATTAGTGGTC i proCoq1.NW_012152729v1 C 0 I 151 s otoGar3.GL873566 13718079 55 + 13852661 GATGAAATT-------------------------TGAATTTTTTCCTTGAACTC-CAAGGCT-ATCATGGCTATTAGTGGGC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22477660 74 - 129401213 GATGGAGCG-----CTTCCTTTGGATGCTGCAG-TGAAATTCTTCCTTGAACTA-TAAAGTGGATTATGGCTGTTAGTAGC- i mm10.chr8 I 988 C 0 s canFam3.chr5 80473817 62 + 88915250 GATGGAGCA------------------TTGCAGTTAAAATTCTTCTCTGAA-AC-ACAGGCTGATTACCACTATTGGTCGTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930408 76 + 1009443 GATAGAGCA-----CTCCCTTAAAATGCTGTGTTTGAAATTCTTC-TTGAACTCTTAAGGATGATTACTGATATTGGTAGTC i dasNov3.JH569970 C 0 C 0 a score=666040.000000 s hg38.chr16_GL383557v1_alt 60478 56 + 89672 AGGCTATCCTGGGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG s panTro5.chr16 21491954 56 - 81586097 AGGCTATCCTGGGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCAAGGATGGGCAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553932 56 - 90481686 AGGCTATCCTGGGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCAAGGATGGGCAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786347 56 + 3010529 AGGCTATCCTGGGT----AAGTAATTACGATCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898287 56 + 163208435 AGGCTATCCTGGGT----AAGTAATTACGGTCCT-CTGCCCTCCAAGGCGAGGATGGGCAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372681 56 - 74971481 AGGCTATCCTGAGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085281 56 - 78541002 AGGCTATCCTGAGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478024 56 + 26466322 AGGCTATCCTGAGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805582 56 + 43916225 AGGCTATCCTGAGT----AAGCAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235777 56 + 75399963 AGGCTATCCTGAGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796168 56 - 7209941 AGGCTATCCTGAGT----AAGTAATTACGGTCCT-CTGCCCTCCAGGGCGAGGATGGGCAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538335 56 + 3907144 AGGCTATCCTGAGT----AAGTAATTACGGTTCT-CTGCCCTCCAGGGCGAGGAGGGGCAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543298 56 - 44557958 AGGCTATGCTGAGT----AAGTAATTATAGTCCC-CTGCCCTCCAGAGCCATCCTGGGCAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354578 56 + 6628207 AGGCTATGCTGAGT----AAGTAATTACAGTCCC-CTGCCCTCCAGAGCCATCCTGGGCAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338693 56 - 5917169 AGGCTATGCTGAGT----AAGTAATTATAGTCCC-CTGCCCTCCAGAGCCATCCTGGGCAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292897 56 - 10531588 AGGCTATGCTGAGT----AAGTAATTACAGTCCC-CTGCCCTCCAGAGCCATCCTGGGCAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54942021 56 + 72247402 AGGTGGTCTTGAGT----ATATAATCACGGTCCC-CTGTCCTCTAGGGCAAGGCTGGGCAG i micMur3.chr20 C 0 I 196 s otoGar3.GL873566 13718134 53 + 13852661 -ATGGGTCTATAGT----AAGTAACCA--GTCTC-CCACCCTCTATGGCAATGCTGGGTAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22477734 16 - 129401213 -------------------------------------ATTCTCCAAGGTGACG-------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80473879 57 + 88915250 AAGCTATCTTGAGT----AAACAAGCCTAGTTCCGCTGACCTCTAGGGCAATGTAGGGCAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930484 60 + 1009443 AGACTATGTTGAATTTTCAAGTAAGCACAGTTCC-CTGGCCCCTAGGGCAATGCTGAGAAC i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2950254 151 + 9850184 I a score=1569365.000000 s hg38.chr16_GL383557v1_alt 60534 149 + 89672 ATTCC--TACG--CAGTTCCATGGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCTATCAGCTCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-ACACAAATATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACTCAATCAACATTA s panTro5.chr16 21492010 149 - 81586097 ATTCC--TACG--CAGTTCCATGGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCTATCAGCTCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-ACACAAATATC-----TTTTC--------TTCTGAG----ATTGTGGCC---------------------------------------TACAGAATAAGCAGGACTCAATCAACATTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21553988 149 - 90481686 ATTCC--TACG--CAGTTCCATGGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCTATCAGCTCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-ACACAAATATC-----TTTTC--------TTCTGAG----ATTGTGGCC---------------------------------------TACAGAATAAGCAGGACTCAATCAACATTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786403 149 + 3010529 ATTCC--TACG--CAGTTGCATGGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCTATCAGCTCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-ACACAAATATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACTCAATCAACATTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898343 149 + 163208435 ATTCC--CACG--CAGTTGCACAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCTATCAGCTCTCTGAAGCCTTAGGCATGTAATAGGGAACGGA-ACGCAAATATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACTCAATCAACATTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372737 148 - 74971481 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCGTGTAATAGGGAACAGA-AGGCAAGTATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACCCTATCAACATTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085337 148 - 78541002 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCGTGTAATAGGGAACAGA-AGGCAAGTATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACCCTATCAACATTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478080 148 + 26466322 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCGTGTAATAGGGAACAGA-AGGCAAGTATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACCCTATCAACATTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805638 148 + 43916225 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-AGGCAAGTATC-----TTTTC--------TTCCGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACCCTATCAACATTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235833 148 + 75399963 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-AGGCAAGTATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACCCTATCAACATTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796224 148 - 7209941 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCGTGTAATAGGGAACAGA-AGGCAAGTATC-----TTTTC--------TTCTGAG----ATTGCGGCC---------------------------------------TACAGAATAAGCAGGACCCTATCAACATTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538391 148 + 3907144 ATTCC---ATG--CTGTTGCTTAGGCT-------G------GGGGCTGGCAGGAAG----------TGAAGGCCATCAGCCCTCTGAAGCCTTAGGCATGTAATAGGGAACAGA-ACGCAAGTATC-----TTTTC--------TTCTGAG----ATTGCCGCC---------------------------------------TACAGAATAAGCAGGACTCTATCAACATTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543354 144 - 44557958 ATTTC--TGCG--CTGCTGCATAGGCT-------G------GCGGCTGGCAGGCAG----------TGAAGGCCATCGGCCCTCTGAGGCCTTAGACATGTAATAGAGAACAGA-GCCCAAGTA----------TC--------TTCTGAT----ACTGCGGCC---------------------------------------TACGGAATGAGCAGGATCCTATCAACACTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354634 144 + 6628207 ATTTC--TGCG--CTGCTGCATAGGCT-------G------GAGGTTGGCAGGCAG----------TGAAAGCCATCGGCCCTCTGAAGTCTTAGACATGTAATAGAGAACAGA-GCCCAAGGA----------TC--------TTCTGAT----ACTGCTGCC---------------------------------------TACAGAATGAGCAGGACCCTGTCAACATTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338749 144 - 5917169 ATTTC--TGCG--CTGCTGCATAGGCT-------G------GAGGCTGGCAGGCAG----------TGAAGGCCATTGGCCCTCTGAAGTCTTAGACATGTAATAGAGAACAGA-GCCCAAATA----------TC--------TTCTGAT----ACTGCAGCC---------------------------------------TACAGAATGAGCAGGACTCTATCAACATTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9292953 144 - 10531588 ATTTC--TGCG--CTGCTGCATAGGCT-------G------GAGGCTGGCAGGCAG----------TGAAGGCCATCGGCCCTCTGAAGCCTTAGACACGTAATAGAGAACAGA-GCCCAAGTA----------TC--------TTCTGAT----ACTGCGGCC---------------------------------------TACAGAATGAGCAGGACCCTATGAACATTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13718187 151 + 13852661 GTTCC--CATG--CCTTTGCATAGGCT-------G------CAGGCTGCCAGATAG----------TGAAGGTCATCAATCTTCAGAAGCTTTAGTCATGTGTTAGGAAATAGAGAGAAAAGTATC----TTTTTT--------TTCTGAA----ATTGTGGTC---------------------------------------TATAGAACAAAGAAGACTATATACAAGTTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22477750 190 - 129401213 -CTCC--AAAGGCCCTTTGATTAGGTT-------G------CAGGCTAGT----TG----------TGACAGCC--CAGTTCTTTGACACCCCA-ACACAGACAGGAGAACAGA-GAGCCTGGA-C-----TTTTCACAGCTAGTTCAGAGCATTACTGCAGCTACATATGCCTTGAAGTTTGGTTCGCCTTTACTGTATGCATACACAgaaagtcaga---ggataacattc i mm10.chr8 C 0 I 4 s canFam3.chr5 80473936 159 + 88915250 ATCCCCCCCAG--CCTCTGCATTGGCTGCAGGCAG------GAGGCTGGCAGACAG----------TGAAGGTCACCAGCCCTCTGAAGCCTCAGGCATGTGTTAGGGAAGAGA-AGGTAAGTACCATCTTTTTTT--------CCCTGAG----ATTGTGGTC---------------------------------------TAAAG----AGCAGGACCCTGAAAAAGTTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930544 162 + 1009443 ATTCC--CACT--CCTCTCCCTAGGCT-------GAACACAAGGGCTTACAGAGAGTGAGGGACAATGAGGGTCATCAGCCCTCTGAAGCCTTAGGT------TTGGGAGTAGA-GAACAATGATC--ATCTTTTT--------TTCTAAG----ATCATCCTC---------------------------------------TGAAGAACAAATAGGACCTTGCGAAAGTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942077 196 + 72247402 I e proCoq1.NW_012152729v1 2950254 151 + 9850184 I a score=638296.000000 s hg38.chr16_GL383557v1_alt 60683 56 + 89672 GATG------------------AGTTTGTAGCTA--------------------------CTGAGCACATTATCCCCAATACAAATACCTCAT-TTGGAAT s panTro5.chr16 21492159 56 - 81586097 GATG------------------AGTTTGTAGCTA--------------------------CTGAGCACATTATCCCCAATACAAATACCTCAT-TTGGAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554137 56 - 90481686 GATG------------------AGTTTGTAGCTA--------------------------CTGAGCACATTATCCCCAATACAAATACCTCAT-TTGGAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786552 56 + 3010529 GATG------------------AGTTTGTAGCTA--------------------------CTGAGCACACTATCCCCAATACAAATACCTCAT-TTGGAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898492 56 + 163208435 GATG------------------AGTTTGTGGCTA--------------------------CTCAGCACATTATCCCAAATACAAACACTCCAT-TTGGAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21372885 56 - 74971481 GATG------------------AGTTTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATAACTCAT-TTGGAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085485 56 - 78541002 GATG------------------AGTTTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATAACTCAT-TTGGAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478228 56 + 26466322 GATG------------------AGTTTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATAACTCAT-TTGGAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805786 56 + 43916225 GATG------------------AGTTTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATAACTCAT-TTGGAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58235981 56 + 75399963 GATG------------------AGTCTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATACCTCAT-TTGGAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796372 56 - 7209941 GATG------------------AGTTTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATAACTCAT-TTGGAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538539 56 + 3907144 GATG------------------AGTTTGCAGCTA--------------------------CTCAGCACATTATCCCAAATACAAATACCTCAT-TTGGAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543498 56 - 44557958 GCTG------------------AGTTTGTAGCTA--------------------------CTCACCACATTCTCCCAAATACAGACACCTCGT-TTGGAGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354778 54 + 6628207 GCTG------------------AGTTTGTAGCTA--------------------------CTCACCACATTCTCCCAAAT--AGACACCTCGT-TTGGAGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338893 54 - 5917169 GCTG------------------AGTTTGTAGCTA--------------------------CTCACCACGTTCTCCCAAAT--AGACACCTTGT-TTGGAGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293097 56 - 10531588 GCTG------------------AGTTTGTAGCTA--------------------------CTCACCACATTCTCCCAAATACAGACATCTCGT-TTGGAGT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2950405 52 + 9850184 GATG------------------AGTTTGTAGCTA--------------------------CGTAGAACATTATCCCAGCTGCAAATATCTC-----GGAGT i proCoq1.NW_012152729v1 I 151 C 0 s otoGar3.GL873566 13718338 52 + 13852661 GATG------------------AGTTTGTAGCTA--------------------------CTTAGAACATTATCCCAAGTGCAAATGCTTC-----AGAGT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22477944 98 - 129401213 gatggttctctccttccgcgacagtttgtagtgatcaagaggagttgtaaggcttgagggtccagtgtgtgtccccagagccat---cctgATACTGGGAT i mm10.chr8 I 4 I 10 s canFam3.chr5 80474095 52 + 88915250 GATG------------------AATGTGTAGCTG--------------------------CTCAGAACATTATCCCAACTACAAATATC-----TTGGAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930706 52 + 1009443 GATG------------------AGTTTATAGCTA--------------------------TCGGAAACCTTATGCCAACTAAAGATACC-----TTGGAGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942077 196 + 72247402 I a score=5703163.000000 s hg38.chr16_GL383557v1_alt 60739 310 + 89672 TTCCATTCATTTTCATTCAATGAAGGGAAATGACTGTCCATTATTTTGGAAGAAAACATTTATAATGACTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATTATTCTATCAGGACTT---- s panTro5.chr16 21492215 310 - 81586097 TTCCATTCATTTTCATTCAATGAAGGGAAATGACTGTCCATTATTTTGGAAGAAAACATTTATAATGACTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATTATTCTATCAGGACTT---- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554193 310 - 90481686 TTCCATTCATTTTCATTCAATGAAGGGAAATGACTGTCCATTATTTTGGAAGAAAACATTTATAATGACTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATTATTCTATCAGGACTT---- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786608 310 + 3010529 TTCCATTCATTTTCATTCAATGAAGGGAAATGACTGTCCATTATTTTGGAAGAAAACATTTATAATGACTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATTATTCTACCAGGACTT---- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53898548 310 + 163208435 TTCCATTCATTTTCATTCAATGAAGGGAAATGACTGTCCATTATTTTGGAAGAAAACATTTATAATGACTAGTCGTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCACAGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATTATTCTATCAGGACTT---- i nomLeu3.chr2 C 0 I 306 s rheMac8.chr20 21372941 310 - 74971481 TTCCATTCACTTTCATTCAATGAAGAGAAATGACTGTCCATTATCTTGGAAAAAAACATTTATAATGCCTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085541 310 - 78541002 TTCCATTCACTTTCATTCAATGAAGAGAAATGACTGTCCATTATCTTGGAAAAAAACATTTATAATGCCTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478284 310 + 26466322 TTCCATTCACTTTCATTCAATGAAGAGAAATGACTGTCCATTATCTTGGAAAAAAACATTTATAATGCCTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20805842 310 + 43916225 TTCCATTCACTTTCATTCAATGAAGAGAAATGACTGTCCATTATCTTGGAAAAAAACATTTATAATGCCTAGTCCTGAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236037 310 + 75399963 TTCCATTCACTTTCATTCAATGAAGAGAAATGACTGTCCATTATCTTGGAAAAAAACATTTATAATGCCTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGAAGCTGAGCAATGATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCCTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796428 310 - 7209941 TTCCATTCACTTTCATTCAATGAAGAGAAACGACTGTCCATTATCTTGGAAAAAAACATTTATAATGCCTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATAATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538595 310 + 3907144 TTCCATTCACTTTCATTCAATGAAGAGAAATGACTCTCCATTATCTTGGAAGAAAACATTTATAATGCCTAGTCCTCAAGAATAAC-TTGTTTTATTACCATGATTTGTGA----------------------AAAGCGACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTAATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCCACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543554 308 - 44557958 TTCCATTCACTTTCATTCAATGAAGGGAAATGACTATCCATTATTCTGGAAGAAAACATTTGTAATGACTAGTCCTCAAGAATAACTTTGTTTTATTATC--GATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTG-TTTAGGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGAGCAATGATGTCATCTAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6354832 310 + 6628207 TTCCATTCACTTTCATTCAATGAAGGGAAATGACTATCCATTATTTTGGAAGAAAACATTTGTAATGACTAGTCCTCAAGAATAACTTTGTTTTATTATCATGATCTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTG-TTTAGGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGTGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACAAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3338947 310 - 5917169 TTCCGTTCACTTTCATTCAATGAAGGGAAATGACTATCCATTATTCTGGAAGAAAACATTTGTAATGACTAGTCCTCAAGAATAATTTTGTTTTATTATCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGAGAGTGCCCTG-TTTAGGTTCCGAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293153 310 - 10531588 TTCCATTCACTTTCATTCAATGAAGGGAAATGACTATCCATTATTTTGGAAGAAAACATTTGTAATGACTAGTCCTCAAGAATAACTTTGTTTTATTATCATGATTTGTGA----------------------AAAGCAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTCCCCTG-TTTAGGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGAGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGTAGAGGCTGC-----AGAGGGATGATAATGATTCTATCAGGACTT---- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54942273 303 + 72247402 TTCCATTCACTTTCATTCAATGAAAGGAAATTACTGTCTGTTATTTCAGAAGATAACATGTCTAATGACTTGTTCTCAAGAATAAC--TGTTTTATTACCATGATTTGTGA----------------------AAAGTAATAAGGTAGACAGTTCAAGGAAG--GAC----ACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGAGCGATGATGTCATCCAGGGGTCGTTCTACTGCTACCAGTGTTCTTTCATCCAAAAGATCCAAGAAAAGCAGAGGCTGC-------AGAGATGATAATGATTACATCAGGAGTT---- i micMur3.chr20 I 196 C 0 s proCoq1.NW_012152729v1 2950457 309 + 9850184 TTCCATTCACTTTCATTCAATGAAGGGAAATTACTGTCCGTTATTTTGGAAGATAACATTTATAATGACTAGTTCTCAAGAATAAC--TGTTTTATTATCATGATTTGTGA----------------------AAAGTAACAAGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGAGCGATGATGTCATCCAGGGGTCGTTCTACTGCTACCAGTGTTCTTTCATCCAAAAGATCCAAGAAAAGCAGAGGCTAC-----AGAGAGATGATAATGATTACACCAGGAGTT---- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13718390 309 + 13852661 TTCCAAGCACTTTTGTTCAATGAAGGGAAATTACTATCTGGTATTTTGGAAGATAAGATTTATAATGACTAGTCCTTAAGAATAAC--TGTTTTATTACCATGATTTGTGA----------------------AAAGTAACAAGGAAGACAGTTCAAGGAAG--GACATACACAATGCCCTGTTTTAGGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGCTGAGCAATGATGTCATCCAGGGGCCGTTCTACTGCCACCAGTGTTTTTTCATCCAAAAGATCCAAGAAGAGTAGAGGCTGT-----GGAGAGAGAATAATGATTGTCCTAAGAGTT---- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22478052 315 - 129401213 CTTCATGCCACTGCACTCAAAAAAAGGAAATCTGTGCTCATTCTTTTAGAAAATA--ATTTAAAATGTCTAGTCCTAAAGAATAACTTTGTTTTATTATCATGATTTGGGAAAaaacaaacaaacaaacaaacaaaACAACAGGATAGACAGTTCAAGAAAG--GACACAGACAGTGCCCTGTTTTAAGTTCCAAATTTCTTCTTTTTGATGGGTGGTGGGAGTTGAGCAATGATGTCGTCCAGGGGTCGCTCTACTGCCACAAGTGTCCTTTCATCCAAAAGATCCATAAAGAGCAAGGGCTGC-----AGAGAGACGACAGT-------------------- i mm10.chr8 I 10 C 0 s canFam3.chr5 80474147 307 + 88915250 TTCCATTCACTGG-AGTCAATGAAGGGAAATTACTGTTCATTATTCTGGAA---AACATTCATAATGACTCGTCCTAAAGAATAACTTTGTTTTATTATCATGATTTGTGA----------------------AAACAAACAGGGTAGACAGTTCAAGGAAG--GACACAGACAGTGCCCTATTTTAGGTCCCAAATTTCTTCTTTTTGATGGGTGGTGGAAGTTGAGCGATGATGTCATCCAGGGGCCGTTCTACTGCTACCAGGGTTCTTTCATCCAAAAGATCCATGAAGAGCAAAGGCTGT-----GGAGAGATGATAATGACTCTACCAGGAGTT---- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 930758 322 + 1009443 TCCTGTTCAGTTTCATTCAATGAAGGGAAATTACTGTCCATTATTTTTGAAGATAATATTTACGATGACTATTCGTAAAGAATAACTTTGTTTTATTGTCATGATTTGTGA----------------------AAAGAAACAGGGTAGACAGTTCAAGAAAGGAGACACAGACAGTGCCTTGTTTTAGGTTCCAAATTTCTTCTTTTTGATTGGCGGTGGGAGCTGAGCAATAATGTCATCCAGGGGCCGTTCTACTGCCACGAGTGTTCTTTCATCCAAAAGATCCATGAAGAGGAGAGGCTACAGGTCAGAAAGATGATGGTGATTGCACCAGGTGTTTCAT i dasNov3.JH569970 C 0 C 0 a score=262737.000000 s hg38.chr16_GL383557v1_alt 61049 18 + 89672 AGGATCCAGGGCTAGTCC s panTro5.chr16 21492525 18 - 81586097 AGGATCCAGGGCTAGTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554503 18 - 90481686 AGGATCCAGGGCTAGTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786918 18 + 3010529 AGGATCCAGGGCTAGTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899164 18 + 163208435 aGGATCCAGGGCTAGTCC i nomLeu3.chr2 I 306 C 0 s rheMac8.chr20 21373251 18 - 74971481 ACAATCCAGGGCTAGTCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085851 18 - 78541002 ACAATCCAGGGCTAGTCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478594 18 + 26466322 ACAATCCAGGGCTAGTCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806152 18 + 43916225 ACAATCCAGGGCTAGTCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236347 18 + 75399963 ACGATCCAGGGCTAGTCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796738 18 - 7209941 ACAATCCAGGGCTAGTCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538905 18 + 3907144 AGGATCCAGGGCTAGTCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543862 18 - 44557958 ATGATCCGGGGCCAGTCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355142 18 + 6628207 AGGATGCGGGGCCAGTCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339257 18 - 5917169 AGGATCCGGGGCCAGTCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293463 18 - 10531588 AGGATCCGGTGCCAGTCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54942576 18 + 72247402 AGGCTCCAGGGCTAGTCC i micMur3.chr20 C 0 I 339 s proCoq1.NW_012152729v1 2950766 18 + 9850184 AGGCTCCAGGGCTAGTCC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13718699 18 + 13852661 AGGGTCCAGGGCTAGTCC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474454 18 + 88915250 AGGCTCCAGGGCCAGTCC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931080 18 + 1009443 AGGCTCAAGGACACATCC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478367 0 - 129401213 C a score=17290.000000 s hg38.chr16_GL383557v1_alt 61067 1 + 89672 T s panTro5.chr16 21492543 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554521 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786936 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899182 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373269 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085869 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478612 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806170 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236365 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796756 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538923 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543880 1 - 44557958 T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355160 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339275 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293481 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2950784 1 + 9850184 T i proCoq1.NW_012152729v1 C 0 I 80 s otoGar3.GL873566 13718717 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474472 1 + 88915250 T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931098 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478367 0 - 129401213 C a score=344315.000000 s hg38.chr16_GL383557v1_alt 61068 41 + 89672 GAAAGAACTGACTGTAGGTAGACACCATCTAAGCTAAAA----GG s panTro5.chr16 21492544 41 - 81586097 GAAAGAACTGACTGTAGGTAGACACCATCTAAGCTAAAA----GG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554522 41 - 90481686 GAAAGAACTGACTGTAGGTAGACACCATCTAAGCTAAAA----GG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786937 41 + 3010529 GAAAGAACTGACTGTAGGTAGACACCATCTAAGCTAAAA----GG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899183 41 + 163208435 GAACGAACTGACTCTAGGTAGACACCATCTAGGCTAAAA----GG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373270 41 - 74971481 GAATGAACTGACTATAGGTAGACACCATCTAAACTAAAA----GG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085870 41 - 78541002 GAATGAACTGACTATAGGTAGACACCATCTAAACTAAAA----GG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478613 41 + 26466322 GAATGAACTGACTATAGGTAGACACCATCTAAACTAAAA----GG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806171 41 + 43916225 GAATGAACTGACTATAGGTAGACACCATCTAAACTAAAA----GG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236366 41 + 75399963 GAATGAACTGACTATAGGTAGACACCATCTAAACTAAAA----GG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796757 41 - 7209941 GAATGAACTGACTATAGGTAGACACCATCTAAACTAAAA----GG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538924 45 + 3907144 GAATGAACCGACTAGAGGTAGACACCATCTAAACTAAAAGGTGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543881 41 - 44557958 GAACAAACTAACTATAGTTAAACTCTGTCTAAATTAAAA----GG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355161 41 + 6628207 GAACAAACTAACTGTAGTTAAATGCTGTCTAAATTAAAA----GG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339276 41 - 5917169 GAACAAACTAACTGTAGTTAAACGCTGTCTAAATTAAAA----GG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293482 41 - 10531588 GAACAAACTAACTGTAGTTAAACGCTGTCTAAATTAAAA----GG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13718718 25 + 13852661 GAATTGATTAACTAGAG----------------TTGAAA----GG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22478367 17 - 129401213 --------------AAGAGAGTCATTCTCCA-------------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80474473 25 + 88915250 AAACAGACTAACTAGAGCTAAACAG-------------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931099 25 + 1009443 GAATGTACTAACTAGGG----------------CTAAAA----GG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e proCoq1.NW_012152729v1 2950785 80 + 9850184 I a score=150904.000000 s hg38.chr16_GL383557v1_alt 61109 11 + 89672 ---TTAGCCTAGTT s panTro5.chr16 21492585 11 - 81586097 ---TTAGCCTAGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554563 11 - 90481686 ---TTAGCCTAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786978 11 + 3010529 ---TTAGCCTAGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899224 11 + 163208435 ---TTAGCCTAGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373311 11 - 74971481 ---TTAGCCTAGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085911 11 - 78541002 ---TTAGCCTAGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478654 11 + 26466322 ---TTAGCCTAGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806212 11 + 43916225 ---TTAGCCTAGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236407 11 + 75399963 ---TTAGCCTAGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796798 11 - 7209941 ---TTAGCCTAGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538969 11 + 3907144 ---TTAGCCTAGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543922 11 - 44557958 ---TTAGTCTAGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355202 11 + 6628207 ---TTAGTATAGTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339317 11 - 5917169 ---TTAGTCTAGTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293523 11 - 10531588 ---TTAGTCTAGTT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2950865 11 + 9850184 ---TTAGCCTAGTT i proCoq1.NW_012152729v1 I 80 C 0 s otoGar3.GL873566 13718743 11 + 13852661 ---TTAGCCAAGTT i otoGar3.GL873566 C 0 I 344 s mm10.chr8 22478384 11 - 129401213 ---CCAGCTCTGGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80474498 11 + 88915250 ---TCAGCACAGTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931124 14 + 1009443 TGTGTTCCTTAAAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I a score=785851.000000 s hg38.chr16_GL383557v1_alt 61120 58 + 89672 CAAGGCTCAAATGATTTAAATTTCTTGACAATCTTTCCTGCCCTGGGACTC-AAAATAG s panTro5.chr16 21492596 58 - 81586097 CAAGGCTTAAATGATTTAAATTTCTTGACAATCTTTCCTGCCCTGGGACTC-AAAATAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554574 58 - 90481686 CAAGGCTTAAATGATTTAAATTTCTTGACAATCTTTCCTGCCCTGGGACTC-AAAATAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 786989 58 + 3010529 CAAGGCTCAAATGATTTAAATTTCTTGACAATCTTTCCTGCCCTGGGACTC-AAAATAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899235 59 + 163208435 CAAGGCTCAAATGATTTAAAATTCTTGACAAACTTTCATGCCGTGGGACTCAAAAATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373322 58 - 74971481 CAAGGCTCAAATGATTTAAATCTCTTGACAATCTTTCCTGCCCTGGGACTC-AAAATAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085922 58 - 78541002 CAAGGCTCAAATGATTTAAATCTCTTGACAATCTTTCCTGCCCTGGGCCTC-AAAATAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478665 58 + 26466322 CAAGGCTCAAATGATTTAAATCTCTTGACAATCTTTCCTGCCCTGGGACTC-AAAATAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806223 58 + 43916225 CAAGGCTCAAATGATTTAAATCTCTTGACAATTTTTCCTGCCCTGGGACTC-AAAATAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236418 58 + 75399963 CAAGGCTCAAATGATTTAAATCTCTTGACAATCTGTCCTGCCCTGGGACTC-AAAATAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796809 58 - 7209941 CAAGGCTCAAATGATTTAAATCTCTTGACAATTTTTCCTGCCCTGGGACTC-AAAATAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 538980 58 + 3907144 CAAGGCTCAAATGATTTAAATCTCTTGACAATCTTTCCTGCCCTGGGACGC-AAAATAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543933 57 - 44557958 CCAGGCTCAAATGATTT-AATCTCTTGACAGTTTTTCCTGCTGTAGGACTC-AAAATAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355213 56 + 6628207 CCAGGCTCAAATGATTT--ATCTCCTGACAGTTTTTCCTGCTGTATGACTC-AAAATAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339328 57 - 5917169 CCAGGCTCAAATGATTT-AATCTCTTGACAGTTTTTCCTGCTATAGGACTC-AAAACAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293534 57 - 10531588 CCAGGCTCAAATGATTT-AATCTCTTGACAGTTTTTCCTGCTGTAGGACTC-AAAATAG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2950876 57 + 9850184 CAAGGCTGAAGTGATCTAAATCTC-TGGCAATCTTTCCTGCCCTAGAACTC-AAAATAG i proCoq1.NW_012152729v1 C 0 I 207 s otoGar3.GL873566 13719098 57 + 13852661 CAAGGCTTAAATGATCTAAATCTC-TGATAATCTTTCCTGCACTAGGATTC-AAAACAG i otoGar3.GL873566 I 344 I 9 s mm10.chr8 22478395 57 - 129401213 CAAGACTCAAAGGACAGAAAT-TCCTGACAATCTTTCCTGCCCTTGGACTC-AACATGG i mm10.chr8 C 0 C 0 s canFam3.chr5 80474509 57 + 88915250 CAAGGCTGGAGGAATCAAAATTTC-TGAGGACCCTTCCTGTCCTAGGACTC-AAAATGG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931138 57 + 1009443 CGAGGCTGGTCTTAAGTTAACCTC-TGATGATCTTTCCTGTCCCAGGGCTC-AAAATGC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I a score=62421.000000 s hg38.chr16_GL383557v1_alt 61178 5 + 89672 TTG-GA s panTro5.chr16 21492654 5 - 81586097 TTG-GA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554632 5 - 90481686 TTG-GA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787047 5 + 3010529 TTG-GA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899294 6 + 163208435 TTGTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373380 5 - 74971481 TTG-GA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085980 5 - 78541002 TTG-GA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478723 5 + 26466322 TTG-GA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806281 5 + 43916225 TTG-GA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236476 5 + 75399963 TTG-GA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796867 5 - 7209941 TTG-GA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539038 5 + 3907144 TTG-GA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543990 5 - 44557958 TTG-GA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355269 5 + 6628207 TTG-GA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339385 5 - 5917169 TTG-GA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293591 5 - 10531588 TTG-GA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13719164 5 + 13852661 TTG-GA i otoGar3.GL873566 I 9 I 7 s mm10.chr8 22478452 5 - 129401213 GCG-GA i mm10.chr8 C 0 I 155 s canFam3.chr5 80474566 5 + 88915250 TTC-AT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931195 5 + 1009443 TTG-GA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I a score=855405.000000 s hg38.chr16_GL383557v1_alt 61183 95 + 89672 -ATGCATAAAAGCttttttttt--ta-------ttttttagaga--------tcttgctatgttgcctaggcaggagagcagtggtcattcatagaca------tgatcaacgtgcact s panTro5.chr16 21492659 95 - 81586097 -ATGCATAAAAGCttttttttt--ta-------ttttttagaga--------tcttgctatgttgcctaggcaggagagcagtggtcattcatagaca------tgatcaatgtgcacc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554637 95 - 90481686 -ATGCATAAAAGCttttttttt--ta-------ttttttagaga--------tcttgctatgttgcctaggcaggagagcagtggtcattcatagaca------tgatcaatgtgcacc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787052 103 + 3010529 -ATGCCTAAAAGCtttttttttaaaa-------ttttttagaga-t-gggggtcttgctatgttgcctaggcaggagagcagtggtcattcatagaca------tgatcaacatgcact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899300 109 + 163208435 -AGGCATAAAAGCttttttatt--tatttttatttttttagaagat-gggggtcttattatgttgcccaggcaggagagcagtggtcattcatagaca------tgatcaacatgcact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373385 99 - 74971481 -ATGCATAAAAGCttttttttc-----------ttttttagaga-t-gggggtcttgctatgttgcccaggcaggagagcagtggccactcatagaca------tgatcaacgtgcact i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21085985 99 - 78541002 -ATGCATAAAAGCttttttttc-----------ttttttagaga-t-gggggtcttgctatgttgcccaggcaggagagcagtggccactcatagaca------tgatcaacgtgcact i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478728 99 + 26466322 -ATGCATAAAAGCttttttttc-----------ttttttagaga-t-gggggtcttgctatgttgcccaggcaggagagcagtggccactcatagaca------tgatcaacgtgcact i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806286 99 + 43916225 -ATGCATAAAAGCttttttttc-----------ttttttagaga-t-gggggtcttgctatgttgcccaggcaggagagcagtggccactcatagaca------tgatcaacgtgcact i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236481 99 + 75399963 -ATGCATAAAAGCttctttttc-----------ttttttagaga-t-gggggtcttgctacgttgcccaggcaggagagcagtggccactcatagaca------tgatcaacgtgcact i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796872 99 - 7209941 -ATGTATAAAAGCttttttttc-----------ttttttagaga-t-gggggtctggctatgttgcccaggcaggacagcagcggccactcatagaca------tgatcaacgtgcact i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539043 99 + 3907144 -ATGCATAAAAGCttttttttc-----------tttcttagaga-t-gggggtcttgctatgttgcccaggcaggagagcagtggccactcgtagaca------tgatcaacgtgcact i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21543995 96 - 44557958 -ATGCATGAAAG---tttattt--ta-------ttttttagaga-tggggggtcttactatgttatccaggctggagagcatt---cattcacagaca------tgatcagtgtgcact i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355274 102 + 6628207 -ATGCATGAAAGCtttttcttt--ta-------tttttcagaca-tggggggtcttactatgttgtccaggctggagagcagtgaccattcacagaca------tgatcagagtgcact i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339390 102 - 5917169 -ATGCATGAAAGCCttttcttt--ta-------ttttttagaga-tggggggtcttactatgttgtccaggctggagagcagtggccattcacagaca------tgatcagcgtgcact i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293596 103 - 10531588 -ATGCATGAAAGCtttttattt--tat------ttttttagaga-tggggggtcttactatgttgtccaggctggagagcagtggccattcacagaca------tgatcagcgtgcact i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13719176 99 + 13852661 -ATGCATGCATTCATTCACTTA--t--------ttatttagtga-t--agggtcttgatatattgcccaggta------cagtggctattcacaggtgctgctctgatcaatgtacact i otoGar3.GL873566 I 7 C 0 s canFam3.chr5 80474571 69 + 88915250 CAGGTTGGAA----------TT-----------TTTTTTGAAAA-C------------TATTTtatctatctaatcaatca----------atctatc------taatctatctatctT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C a score=731371.000000 s hg38.chr16_GL383557v1_alt 61278 71 + 89672 gaagccctgaactcctgggcaatcatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca s panTro5.chr16 21492754 71 - 81586097 gaagccctgaactcctgggcaatcatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554732 71 - 90481686 gaagccctgaactcctgggcaatcatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787155 71 + 3010529 gaagccctgaactcctgggcaatcatcctgcctcagtctcctgagtagctgggacaacaggtaggtgtgca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899409 71 + 163208435 gaagccatgaacttctgggcaatcatcctgcctcagtctcctgaggagctgggacaataggtaggtgcgca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373484 71 - 74971481 gaagccctgaactcctgggcaatgatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086084 71 - 78541002 gaagccctgaactcttgggcaatgatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478827 71 + 26466322 gaagccctgaactcctgggcaatgatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806385 71 + 43916225 gaagccctgaactcctgggcaatgatcctccctcactctcctgagtagctgggacaataggtaggtgtgca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236580 71 + 75399963 gaagccctgaactcctgggcaatgatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6796971 71 - 7209941 gaagccctgaactcctgggcaatgatcctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539142 71 + 3907144 gaagccctgaactcctgggcaatgaccctgcctcagtctcctgagtagctgggacaataggtaggtgtgca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544091 71 - 44557958 gaagccctgaactcctgggcagtcatcctgcctcagtctcctaagtagctgggacaataggTAGGTATGCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355376 70 + 6628207 gaagccctgaactcctgggcagtcatcctgcctcagtctcctaagtagc-gggacaacaggTAGGTATGCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339492 71 - 5917169 gaagccctgaactcctgggcagtcatcctgcctcagtctcctaagtagctgggataataggTAGGTATGCA i cebCap1.NW_016107433v1 C 0 I 15 s aotNan1.NW_018500622v1 9293699 71 - 10531588 gacaccctgaactcctgggcagtcatcctgcctcagtcttctaagtacctgggacaataggTAGGTATGCA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80474640 45 + 88915250 ---AATCTTAATCTTAgggcaa------------------ctggatggctgagtcagt---tgagtgtc-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e otoGar3.GL873566 13719275 0 + 13852661 C a score=200520.000000 s hg38.chr16_GL383557v1_alt 61349 25 + 89672 cggctgcgcctggcTCAAGATTGGG s panTro5.chr16 21492825 25 - 81586097 cggctgcgcctggcTCAAGATTGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554803 25 - 90481686 cggctgcgcctggctCAAGATTGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787226 25 + 3010529 cggctgcgcctggcTCAAGATTGGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899480 25 + 163208435 ctgctgcgcctggcTTAAGATTGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373555 25 - 74971481 ctgctgcacctggcTCAAGACTGGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086155 25 - 78541002 ctgctgcacctggcTCAAGACTGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478898 25 + 26466322 ctgctgcacctggcTCAAGACTGGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806456 25 + 43916225 ctgctgcacctggcTCAAGACTGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236651 25 + 75399963 ctgctgcacctggcTCAAGACTGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797042 25 - 7209941 ctgctgcacctggcTCAAGACTGGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539213 25 + 3907144 ctgctgcacccggcTCAAGATCGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544162 25 - 44557958 TCGCTGCAACCTGCTCAAGATTGGG i calJac3.chr20 C 0 I 26 s saiBol1.JH378225 6355446 25 + 6628207 TCACTGCAACCTGCTCAAGATTGGG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9293770 25 - 10531588 TCACTGCAACTTGCTCAAGATTGGG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80474685 24 + 88915250 -tgactcttttatctcagggttgtg i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e otoGar3.GL873566 13719275 0 + 13852661 C a score=9555.000000 s hg38.chr16_GL383557v1_alt 61374 1 + 89672 A s panTro5.chr16 21492850 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554828 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787251 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899505 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373580 1 - 74971481 A i rheMac8.chr20 C 0 I 2 s macFas5.chr20 21086180 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478923 1 + 26466322 A i macNem1.NW_012011355v1 C 0 I 2 s cerAty1.NW_011999143v1 20806481 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 I 2 s chlSab2.chr5 58236676 1 + 75399963 A i chlSab2.chr5 C 0 I 2 s manLeu1.NW_012101698v1 6797067 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 I 2 s colAng1.NW_012123265v1 539238 1 + 3907144 A i colAng1.NW_012123265v1 C 0 I 9 s saiBol1.JH378225 6355471 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9293795 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80474709 1 + 88915250 a i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e calJac3.chr20 21544187 26 - 44557958 I e otoGar3.GL873566 13719275 0 + 13852661 C a score=2552.000000 s hg38.chr16_GL383557v1_alt 61375 1 + 89672 G s panTro5.chr16 21492851 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554829 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787252 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899506 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21086181 1 - 78541002 A i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6355472 1 + 6628207 G i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9293796 1 - 10531588 G i aotNan1.NW_018500622v1 C 0 I 11 s canFam3.chr5 80474710 1 + 88915250 g i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544187 26 - 44557958 I e otoGar3.GL873566 13719275 0 + 13852661 C a score=580.000000 s hg38.chr16_GL383557v1_alt 61376 3 + 89672 CCt- s panTro5.chr16 21492852 3 - 81586097 CCt- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554830 3 - 90481686 CCt- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787253 3 + 3010529 CCA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899507 3 + 163208435 Ctt- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21086182 3 - 78541002 CTT- i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6355473 3 + 6628207 CTT- i saiBol1.JH378225 C 0 I 4 s canFam3.chr5 80474711 3 + 88915250 -ttc i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544187 26 - 44557958 I e otoGar3.GL873566 13719275 0 + 13852661 C a score=-2166.000000 s hg38.chr16_GL383557v1_alt 61379 8 + 89672 --ttttttt-----t s panTro5.chr16 21492855 7 - 81586097 --ttttttt------ i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554833 7 - 90481686 --ttttttt------ i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787256 13 + 3010529 --ttttttttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899510 7 + 163208435 --ttttttt------ i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6355480 7 + 6628207 --TTGGGTT------ i saiBol1.JH378225 I 4 I 24 s canFam3.chr5 80474714 8 + 88915250 agtctcca------- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544187 26 - 44557958 I e otoGar3.GL873566 13719275 0 + 13852661 C a score=194224.000000 s hg38.chr16_GL383557v1_alt 61387 213 + 89672 -ttttttttttttttttGAGACAGAgagtc--------------------tcgctctgccgcccag----------------gctggagtgcagtggcgcaatctcg--gctcacggcaagctccgcctcc--------------------cgggttcacgccattctcctgcctcagcctcccgggtagctgggactacaggtgcccaccaccacgcccggctaattttttgtatttttagtagagatggggtttcaccgtgttagccagg- s panTro5.chr16 21492862 195 - 81586097 -----------------gagacagag--tc--------------------tcgctctgccgcccag----------------gctggagtgcagtggcgcaatctcg--gctcatggcaagctccgcctcc--------------------cgggttcacgccattctcccgcctcggcctcccgggtagctgggactacaggcgcccaccaccatgcccggctaattttttgtatttttagtagagatggggtttcaccgtgttagccagg- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554840 152 - 90481686 -------tttttttttgtagacagag--tc--------------------tcgctctgccgcccag----------------gctggagtgcagtggcgcaatctcg--gctcacggcaagctccgcctccnnnnnnnnnnnnnnnnnnnnt-------------------------------------------------------------------------aatttttgtatttttagtagagatggggtttcaccgtgttagccagg- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787269 211 + 3010529 -ttttttttttttttttgagactgag--tc--------------------tcgctctgccgcccag----------------gctggagtgcagcggcgcaatctcg--gctcactgcaagctccgcctcc--------------------cgggttcacgccattctcctgcctcagccttccgggtagctgggactacaggcacccaccactacgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccagg- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899517 197 + 163208435 ---------------ttgagacggag--tc--------------------tggctctgctgcccag----------------gctggagtgcagtggcatgatcttg--gctcactgcaagctccacctcc--------------------cgggttcacgccattctcctgcctcagtctcccggttagctgggactacaggcgcccgccaccatgcccggctaattttttgtatttttagtagagacggggtttcatcgtgttagccaag- i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21544213 230 - 44557958 --TTTTTTACGTTTCTCTGGACAGAAAATCTAC---------------AATTCCTTTGTATCTCAGATA-CAATTTTAAGCAgctggagtgcaatggcacaatcttg--gctcactgcaagctctgcctcc--------------------tgggttcaagtgattctcctgtttcagcctcccaagtagctgggattacaggcatgtgccaccacacccagctaa--ttttgtatttttagtagagatgggttttctccatgttggtcagg- i calJac3.chr20 I 26 C 0 s saiBol1.JH378225 6355511 231 + 6628207 --TTTTTTATGTTTCTCTGGACAGAAAATCTAT---------------GATTCCCTTGTATCTCAGCAATCAATTTTAAGCAgctagagtgcaatggcgcaaccttg--gctcactgcaaccttcgcctcc--------------------tgggttcaagtgattctcctgtctcagcctcccaagtagctgggattacaggcatgtgccaccacacccagctaa--ttttgtatttttagtagagatggggtttctccatgttggtcagg- i saiBol1.JH378225 I 24 C 0 s canFam3.chr5 80474722 193 + 88915250 tgttgtgcttcatgctgggcatggag--cctacctaaaaaattttaaaaataaTCTCTAcacctaa----------------tgtggggctcaaactcacaaccttgaaatcaatagtaatatatgctcta--------------------------------------ctgactgagccaaccaggTCCCCCAAGGT-TAGGAACCTTTTATT--------TTAA--GTTTATTTTTTTAGTAA----------TCACTgtgc---ccaatg i canFam3.chr5 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e otoGar3.GL873566 13719275 0 + 13852661 C a score=136604.000000 s hg38.chr16_GL383557v1_alt 61600 85 + 89672 atggtctcgatctcctgaactc--gtgatccgcccaccttggcctcccaaagtgctggg-attacaggcgtgagccactgcgcccggc s panTro5.chr16 21493057 85 - 81586097 atggtctcgatctcctgagctc--gtgatccgcccaccttggcctcccaaagtgctggg-attacaagcgtgagccactgcgcccggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21554992 86 - 90481686 atggtctcgatctcctgaactc--gtgatccgcccaccttggcctcccaaagtgctgggaattacaggcgtgagccactgcgcccggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787480 85 + 3010529 atggtctcgatctcctgaactt--gtgatccgcccaccttggcctcccaaagtgctggg-attacaggcgtgagccactgtgcccggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899714 85 + 163208435 acggtctcaatctcctgaactc--gtgatccgcccacctcggcctcccaaagtgctggg-attacaggcgtgagccaccgcacctggc i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21544443 87 - 44557958 ctggtcttgaactcccgacctaaggtgatctgcctgcctcggtctcccaaagtgctgga-attacaggtgtgagccaccgtgactggc i calJac3.chr20 C 0 T 343 s saiBol1.JH378225 6355742 87 + 6628207 ctggtcttgaactcccgacctaaggtgatctgcctgccttggtctcccaaagtgctgga-attacaggtgtgagccaccatgcccggc i saiBol1.JH378225 C 0 T 368 s otoGar3.GL873566 13719275 77 + 13852661 atggcctcaaactcctgagctcaagagatcatcttgtttcagtctcctgagtagttagg-actacagg----------tacacCTGGC i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80474915 56 + 88915250 tggggcatga--tcctgagatc--aagagtcgcatgtt----cttctgactgaaccaga-----caggc------------------- i canFam3.chr5 C 0 I 4 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e cebCap1.NW_016107433v1 3339563 15 - 5917169 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I a score=3600.000000 s hg38.chr16_GL383557v1_alt 61685 1 + 89672 c s panTro5.chr16 21493142 1 - 81586097 c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555078 1 - 90481686 c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787565 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899799 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6355461 1 + 6628207 C i saiBol1.JH378225 T 368 C 0 s cebCap1.NW_016107433v1 3339578 1 - 5917169 C i cebCap1.NW_016107433v1 I 15 C 0 s otoGar3.GL873566 13719353 1 + 13852661 C i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80474975 1 + 88915250 C i canFam3.chr5 I 4 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e dasNov3.JH569970 931200 0 + 1009443 C e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544530 343 - 44557958 T a score=18345.000000 s hg38.chr16_GL383557v1_alt 61686 5 + 89672 AAGAT s panTro5.chr16 21493143 5 - 81586097 AAGAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555079 5 - 90481686 AAGAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787566 5 + 3010529 AAGAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899800 5 + 163208435 AAGAT i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6355462 5 + 6628207 AAGAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339579 5 - 5917169 AAGAT i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13719354 5 + 13852661 AAGGT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474976 5 + 88915250 AAGGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931200 5 + 1009443 AAGGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2950933 207 + 9850184 I e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544530 343 - 44557958 T a score=5005.000000 s hg38.chr16_GL383557v1_alt 61691 1 + 89672 T s panTro5.chr16 21493148 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555084 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787571 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899805 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6355467 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339584 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2951140 1 + 9850184 T i proCoq1.NW_012152729v1 I 207 C 0 s otoGar3.GL873566 13719359 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474981 1 + 88915250 T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931205 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54942594 339 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544530 343 - 44557958 T a score=44066.000000 s hg38.chr16_GL383557v1_alt 61692 8 + 89672 GGGAGCTT s panTro5.chr16 21493149 8 - 81586097 GGGAGCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555085 8 - 90481686 GGGAGCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787572 8 + 3010529 GGGAGCTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899806 8 + 163208435 GGGAGCTT i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6355468 8 + 6628207 GGGAGCTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339585 8 - 5917169 GGGAGTTT i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54942933 8 + 72247402 GGGAGCTT i micMur3.chr20 I 339 C 0 s proCoq1.NW_012152729v1 2951141 8 + 9850184 GGGAGCTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13719360 8 + 13852661 GAGAGTTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474982 8 + 88915250 GGGAACTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931206 8 + 1009443 AGGAGCTT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e macNem1.NW_012011355v1 14478924 2 + 26466322 I e rheMac8.chr20 21373581 2 - 74971481 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e manLeu1.NW_012101698v1 6797068 2 - 7209941 I e chlSab2.chr5 58236677 2 + 75399963 I e cerAty1.NW_011999143v1 20806482 2 + 43916225 I e calJac3.chr20 21544530 343 - 44557958 T a score=21840.000000 s hg38.chr16_GL383557v1_alt 61700 2 + 89672 TT s panTro5.chr16 21493157 2 - 81586097 TT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555093 2 - 90481686 TT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787580 2 + 3010529 TT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899814 2 + 163208435 TT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373583 2 - 74971481 TT i rheMac8.chr20 I 2 C 0 s macNem1.NW_012011355v1 14478926 2 + 26466322 TT i macNem1.NW_012011355v1 I 2 C 0 s cerAty1.NW_011999143v1 20806484 2 + 43916225 TT i cerAty1.NW_011999143v1 I 2 C 0 s chlSab2.chr5 58236679 2 + 75399963 TT i chlSab2.chr5 I 2 C 0 s manLeu1.NW_012101698v1 6797070 2 - 7209941 TT i manLeu1.NW_012101698v1 I 2 C 0 s saiBol1.JH378225 6355476 2 + 6628207 TT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339593 2 - 5917169 TT i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54942941 2 + 72247402 TT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2951149 2 + 9850184 TT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13719368 2 + 13852661 TT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 931214 2 + 1009443 TT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80474990 0 + 88915250 C e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e macFas5.chr20 21086185 0 - 78541002 C e colAng1.NW_012123265v1 539239 9 + 3907144 I e calJac3.chr20 21544530 343 - 44557958 T a score=53375.000000 s hg38.chr16_GL383557v1_alt 61702 5 + 89672 AACTA s panTro5.chr16 21493159 5 - 81586097 AACTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555095 5 - 90481686 AACTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787582 5 + 3010529 AACTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899816 5 + 163208435 AACTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373585 5 - 74971481 AACTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086185 5 - 78541002 AACTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478928 5 + 26466322 AACTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806486 5 + 43916225 AACTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236681 5 + 75399963 AACTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797072 5 - 7209941 AACTG i manLeu1.NW_012101698v1 C 0 C 0 s saiBol1.JH378225 6355478 5 + 6628207 AATTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339595 5 - 5917169 AATTG i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54942943 5 + 72247402 AACTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2951151 5 + 9850184 AACTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13719370 5 + 13852661 AACTG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474990 3 + 88915250 --CTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931216 5 + 1009443 AACCG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e colAng1.NW_012123265v1 539239 9 + 3907144 I e calJac3.chr20 21544530 343 - 44557958 T a score=11422.000000 s hg38.chr16_GL383557v1_alt 61707 1 + 89672 A s panTro5.chr16 21493164 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555100 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787587 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899821 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373590 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086190 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478933 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806491 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236686 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797077 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539248 1 + 3907144 A i colAng1.NW_012123265v1 I 9 C 0 s saiBol1.JH378225 6355483 1 + 6628207 G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339600 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54942948 1 + 72247402 A i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2951156 1 + 9850184 A i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13719375 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474993 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931221 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293797 11 - 10531588 I e calJac3.chr20 21544530 343 - 44557958 T a score=19000.000000 s hg38.chr16_GL383557v1_alt 61708 1 + 89672 G s panTro5.chr16 21493165 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555101 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787588 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899822 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373591 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086191 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478934 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806492 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236687 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797078 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539249 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6355484 1 + 6628207 G i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339601 1 - 5917169 G i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293808 1 - 10531588 G i aotNan1.NW_018500622v1 I 11 C 0 s micMur3.chr20 54942949 1 + 72247402 G i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2951157 1 + 9850184 G i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13719376 1 + 13852661 G i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80474994 1 + 88915250 G i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931222 1 + 1009443 G i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I e calJac3.chr20 21544530 343 - 44557958 T a score=424420.000000 s hg38.chr16_GL383557v1_alt 61709 30 + 89672 TTCACTCATAAAAGGTCTCAGCAGGATTTT s panTro5.chr16 21493166 30 - 81586097 TTCACTCATAAAAGGTCTCAGCAGGATTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555102 30 - 90481686 TTCACTCATAAAAGGTCTCAGCAGGATTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787589 30 + 3010529 TTCACTCATAAAAGGTCTCAGCAGGATTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899823 29 + 163208435 TTCACTCACAAAAGGTCTCAGCAGGA-TTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373592 30 - 74971481 TTTACTCATAAAAGGTCTCAGCAGGATTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086192 30 - 78541002 TTTACTCATAAAAGGTCTCAGCAGGATTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478935 30 + 26466322 TTTACTCATAAAAGGTCTCAGCAGGATTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806493 30 + 43916225 TTTACTCATAAAAGGTCTCAACAGGATTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236688 30 + 75399963 TTTACTCATAAAAGGTCTCAGCAGGATTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797079 30 - 7209941 TTTACTCATAAAAGGTCTCAGCAGGATTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539250 29 + 3907144 TTTACTCATAAAAGGTCTCAGCAGGA-TTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544187 30 - 44557958 TTCACTCATAAAAGGTCTCAGCAGGATTTT i calJac3.chr20 T 343 C 0 s saiBol1.JH378225 6355485 30 + 6628207 TTCACTCATAAAAGGTCTCAGCAGGATTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339602 30 - 5917169 TTCACTAATAAAAGGTCTCAGCAGGATTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293809 30 - 10531588 TTCACTCATAAAAGGTCTCAGCAGGATTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54942950 30 + 72247402 TTCATTCATAAAAGTTTTCAGGAGGATTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2951158 30 + 9850184 CTCATTCATAAAAGTTTTCAGCAAGATTTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13719377 30 + 13852661 TTAATTCATAAAAATTTTCAGCAAGgggcg i otoGar3.GL873566 C 0 I 131 s canFam3.chr5 80474995 29 + 88915250 TTCACAAATAAAAGATTTCAACAAGATTT- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931223 28 + 1009443 ATCACGCATAAACAATTTCAACAGGTTG-- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I a score=-11127.000000 s hg38.chr16_GL383557v1_alt 61739 2 + 89672 T-T s panTro5.chr16 21493196 2 - 81586097 T-T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555132 2 - 90481686 T-T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787619 2 + 3010529 T-T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899852 2 + 163208435 T-T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373622 2 - 74971481 T-T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086222 2 - 78541002 T-T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478965 2 + 26466322 T-T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806523 2 + 43916225 T-T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236718 2 + 75399963 T-T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797109 2 - 7209941 T-T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539279 2 + 3907144 T-T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544217 1 - 44557958 T-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355515 1 + 6628207 T-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339632 1 - 5917169 T-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9293839 2 - 10531588 TT- i aotNan1.NW_018500622v1 C 0 I 459 s micMur3.chr20 54942980 1 + 72247402 --T i micMur3.chr20 C 0 I 1 s proCoq1.NW_012152729v1 2951188 1 + 9850184 --T i proCoq1.NW_012152729v1 C 0 I 2 s canFam3.chr5 80475024 2 + 88915250 T-T i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931251 2 + 1009443 T-T i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=314589.000000 s hg38.chr16_GL383557v1_alt 61741 24 + 89672 TACATTTCTCTGGATAGAAAATCT s panTro5.chr16 21493198 24 - 81586097 TACATTTCTCTGGATAGAAAATCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555134 24 - 90481686 TACATTTCTCTGGATAGAAAATCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787621 24 + 3010529 TACATTTCTCTGGATAGAAAATCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899854 24 + 163208435 TACATTTCTCTGGACAGAATATCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373624 24 - 74971481 TACATTTCTCTGGATAGAAAATCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086224 24 - 78541002 TACATTTCTCTGGATAGAAAATCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478967 24 + 26466322 TACATTTCTCTGGATAGAAAATCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806525 24 + 43916225 TACATTTCTCTGGATAGAAAATCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236720 24 + 75399963 TACATTTCTCTGGATAGAAAATCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797111 24 - 7209941 TACATTTCTCTGGATAGAAAATCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539281 24 + 3907144 TACATTTCTCTGGATAGAAAATCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544218 24 - 44557958 TACGTTTCTCTGGACAGAAAATCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355516 24 + 6628207 TATGTTTCTCTGGACAGAAAATCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339633 24 - 5917169 TACATTTCTCTGGACAGAAAATCT i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54942982 23 + 72247402 -ATGTTTCTTTGGATAGAAAATCT i micMur3.chr20 I 1 I 59 s proCoq1.NW_012152729v1 2951191 24 + 9850184 TATGTTTCTTTGGACAGAAAATCT i proCoq1.NW_012152729v1 I 2 C 0 s canFam3.chr5 80475026 24 + 88915250 CATGTTTTTCTATTCAGAACATTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931253 24 + 1009443 CATGTTTTTTTGAACAGGAAATCT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=20688.000000 s hg38.chr16_GL383557v1_alt 61765 2 + 89672 AT s panTro5.chr16 21493222 2 - 81586097 AG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555158 2 - 90481686 AT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787645 2 + 3010529 AT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899878 2 + 163208435 AT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373648 2 - 74971481 AT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086248 2 - 78541002 AT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478991 2 + 26466322 AT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806549 2 + 43916225 AT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236744 2 + 75399963 AT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797135 2 - 7209941 AT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539305 2 + 3907144 AT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544242 2 - 44557958 AC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355540 2 + 6628207 AT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3339657 2 - 5917169 AC i cebCap1.NW_016107433v1 C 0 C 0 s proCoq1.NW_012152729v1 2951215 2 + 9850184 AT i proCoq1.NW_012152729v1 C 0 I 54 s canFam3.chr5 80475050 2 + 88915250 AT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931277 2 + 1009443 AT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=47485.000000 s hg38.chr16_GL383557v1_alt 61767 8 + 89672 GCTTCTTA-- s panTro5.chr16 21493224 8 - 81586097 GCTTCTTA-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555160 8 - 90481686 GCTTCTAA-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787647 8 + 3010529 GCTTCTTA-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899880 8 + 163208435 GCTTCTTC-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373650 8 - 74971481 GCTTCTTA-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086250 8 - 78541002 GCTTCTTA-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14478993 8 + 26466322 GCTTCTTA-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806551 8 + 43916225 GCTTCTTA-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236746 8 + 75399963 GCTTCTTA-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797137 8 - 7209941 GCTTCTTA-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 539307 8 + 3907144 GCTTCTTA-- i colAng1.NW_012123265v1 C 0 I 1157 s calJac3.chr20 21544244 8 - 44557958 AATTCCTT-- i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6355542 8 + 6628207 GATTCCCT-- i saiBol1.JH378225 C 0 I 2 s cebCap1.NW_016107433v1 3339659 8 - 5917169 GATTCCCT-- i cebCap1.NW_016107433v1 C 0 I 2 s canFam3.chr5 80475052 7 + 88915250 -TCTCTAA-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931279 10 + 1009443 GATTCTCTGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=167351.000000 s hg38.chr16_GL383557v1_alt 61775 24 + 89672 TATCTCAAGAATCAATGTTAAGCA- s panTro5.chr16 21493232 24 - 81586097 TATCTCAAGAATCAATGTTAAGCA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555168 24 - 90481686 TATCTCAAGAATCAATGTTAAGCA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787655 24 + 3010529 TATCTCAAGAATCAATGTTAAGCA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899888 24 + 163208435 TATCTCAAGAATCAGTGTTAAGCA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373658 23 - 74971481 -ATCTCAAGAATCAGTGTTAGGCA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086258 24 - 78541002 TATCTCAAGAATCAGTGTTAGGCA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479001 24 + 26466322 TATCTCAAGAATCAGTGTTAGGCA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806559 24 + 43916225 TATCTCAAGAATTAGTGTTAGGCA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236754 19 + 75399963 TATCTCAAGAATCA-----AGGCA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797145 24 - 7209941 TATCTCAAGAATCAGTGTTAGGCA- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21544254 23 - 44557958 TATCTCAGATA-CAATTTTAAGCA- i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6355552 24 + 6628207 TATCTCAGCAATCAATTTTAAGCA- i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3339669 24 - 5917169 TATCTCAGGAATCAATTTTAAGCA- i cebCap1.NW_016107433v1 I 2 I 399 s canFam3.chr5 80475059 21 + 88915250 CTTCTTAGGGATCAACGTTAA---- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931289 25 + 1009443 TTTCTTAGGAATCAATGTTAATTGA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=4282.000000 s hg38.chr16_GL383557v1_alt 61799 1 + 89672 A s panTro5.chr16 21493256 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555192 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787679 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899912 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373681 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086282 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479025 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806583 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236773 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797169 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21544277 1 - 44557958 g i calJac3.chr20 C 0 I 255 s saiBol1.JH378225 6355576 1 + 6628207 g i saiBol1.JH378225 C 0 I 254 s dasNov3.JH569970 931314 1 + 1009443 G i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475080 0 + 88915250 C e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=61535.000000 s hg38.chr16_GL383557v1_alt 61800 11 + 89672 GGACTTTAAAG s panTro5.chr16 21493257 11 - 81586097 GGACTTTAAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555193 11 - 90481686 GGACTTTAAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787680 11 + 3010529 GGACTTTAAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899913 11 + 163208435 GGACTTCAAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373682 11 - 74971481 GGACTTTAAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086283 11 - 78541002 GGACTTTAAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479026 11 + 26466322 GGACTTTAAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806584 11 + 43916225 GGACTTTAAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236774 11 + 75399963 GGACTTTAAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797170 11 - 7209941 GGACTTTAAAG i manLeu1.NW_012101698v1 C 0 C 0 s canFam3.chr5 80475080 9 + 88915250 --CTTCTGGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931315 11 + 1009443 GGGCTTTGGAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e saiBol1.JH378225 6355577 254 + 6628207 I e calJac3.chr20 21544278 255 - 44557958 I e otoGar3.GL873566 13719407 131 + 13852661 I a score=28814.000000 s hg38.chr16_GL383557v1_alt 61811 6 + 89672 -TCTAAG s panTro5.chr16 21493268 6 - 81586097 -CCTAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555204 6 - 90481686 -CCTAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787691 6 + 3010529 -CCTAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899924 6 + 163208435 -CCTAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373693 6 - 74971481 -CCTAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086294 6 - 78541002 -CCTAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479037 6 + 26466322 -CCTAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806595 6 + 43916225 -CCTAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236785 6 + 75399963 -CCTAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797181 6 - 7209941 -CCTAAA i manLeu1.NW_012101698v1 C 0 C 0 s otoGar3.GL873566 13719538 6 + 13852661 -TTTAAA i otoGar3.GL873566 I 131 C 0 s canFam3.chr5 80475089 6 + 88915250 -CCTGAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931326 6 + 1009443 ACCAGA- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e saiBol1.JH378225 6355577 254 + 6628207 I e calJac3.chr20 21544278 255 - 44557958 I a score=-10170.000000 s hg38.chr16_GL383557v1_alt 61817 4 + 89672 ttc---t s panTro5.chr16 21493274 4 - 81586097 ttc---t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555210 4 - 90481686 ttc---t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787697 5 + 3010529 ttct--t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899930 3 + 163208435 ttc---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373699 7 - 74971481 TTATTAt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086300 7 - 78541002 TTATTAt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479043 7 + 26466322 TTATTAt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806601 7 + 43916225 TTATTAt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236791 7 + 75399963 TTATTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797187 7 - 7209941 TTATTAt i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21544533 4 - 44557958 ---tctt i calJac3.chr20 I 255 C 0 s saiBol1.JH378225 6355831 4 + 6628207 ---ttct i saiBol1.JH378225 I 254 C 0 s otoGar3.GL873566 13719544 3 + 13852661 ----TCT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 931332 4 + 1009443 ---TTCT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475095 0 + 88915250 C e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I a score=460264.000000 s hg38.chr16_GL383557v1_alt 61821 84 + 89672 t-ttttttctcagacagaatctcgatgttacccagcctggagtgcagtggtgcaatcatactcaccgcagccttgaactcctgag s panTro5.chr16 21493278 84 - 81586097 t-ttttttctcagacagaatctcaatgttacccagcctggagtgcagtgatgcaatcatactcactgcagccttgaactcctgag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555214 84 - 90481686 t-tttttcttcagacagaatctcgatgttacccagcctggagtgcagtggtgcaatcatactcactgcagccttgaactcctgag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787702 84 + 3010529 t-ttttttctaagacagaatctcgatgttacccagcctggagtgcagtggtgcaatcatactcactgcagccttgaactcctgag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53899933 84 + 163208435 t-tttttgttaagacagaatctcgatgtcacccaggctggagtgcagtggtgcaattatactcactgcagccttgaactcctgag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373706 84 - 74971481 t-ttttttaaaagacagaatctcgacgtcacccaggctggagtacagtggtgcaatcatactcactgcagccttgaactcctgag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086307 84 - 78541002 t-ttttttaaaagatagaatctcgacgtcacccaggctggagtacagtggtgcaatcatactcactgcagccttgaactcctgag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479050 84 + 26466322 t-ttttttaaaagatagaatctcgacgtcacccaggctggagtacagtggtgcaatcatactcactgcagccttgaactcctgag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806608 84 + 43916225 t-ttttttaaaagatagaatctcgacgtcacccaggctggagtacagtggtgcaatcatactcactgcagccttgaactcctgag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236798 85 + 75399963 TAttcttttaaagatagaatctcgacatcacccaggctggagtacagtggtgcaatcatactcactgcagccttgaactcctgag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797194 84 - 7209941 t-ttttttaagagatagaatctcgacgtcacccaggctggagtacagtggtgcaatcatactcactgcagccttgaactcctgag i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21544537 79 - 44557958 t-tttttttaaagatagaatcttgatttccaccaggct-gagtacagtggtacaatcatact----gcagtcttgaactcctgag i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6355835 79 + 6628207 t-ttttttcaaagatagaatctcgatgttgaccaggct-gagtacagtggtacaatcatact----gcagccctgaactcctgag i saiBol1.JH378225 C 0 I 2 s otoGar3.GL873566 13719547 59 + 13852661 T-Ttttttt-----tgcaatttc----tggccggggctgggtttgaac----------------ctgccacctccaacaaatggg i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80475095 29 + 88915250 ---TTCTTGGCAAACAG--------------CAAGTCACAAATGCA--------------------------------------- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I a score=4516.000000 s hg38.chr16_GL383557v1_alt 61905 2 + 89672 ca s panTro5.chr16 21493362 2 - 81586097 ca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555298 2 - 90481686 ca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787786 2 + 3010529 ca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900017 2 + 163208435 ca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373790 2 - 74971481 ca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086391 2 - 78541002 ca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479134 2 + 26466322 ca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806692 2 + 43916225 ca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236883 2 + 75399963 ca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797278 2 - 7209941 ca i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21544617 1 - 44557958 t- i calJac3.chr20 I 1 C 0 s otoGar3.GL873566 13719606 2 + 13852661 ga i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80475124 0 + 88915250 C e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e saiBol1.JH378225 6355914 2 + 6628207 I a score=384594.000000 s hg38.chr16_GL383557v1_alt 61907 74 + 89672 caagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgctccaccacacctagctaattttt s panTro5.chr16 21493364 74 - 81586097 caagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgctccaccacacctagctaattttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555300 74 - 90481686 caagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgctccaccacacctagctaattttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787788 74 + 3010529 caagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgctccaccacacctagctaattttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900019 74 + 163208435 caagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgctccaccacacccagcttattttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373792 74 - 74971481 gaagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgttccaccacacccaactacttttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086393 74 - 78541002 gaagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgttccaccacacccaactacttttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479136 74 + 26466322 gaagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgttccaccacacccaactactttct i macNem1.NW_012011355v1 C 0 I 29 s cerAty1.NW_011999143v1 20806694 74 + 43916225 gaagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgttccaccacacccaactacttttt i cerAty1.NW_011999143v1 C 0 I 29 s chlSab2.chr5 58236885 74 + 75399963 gaagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgttccaccacacccaactacttttt i chlSab2.chr5 C 0 I 27 s manLeu1.NW_012101698v1 6797280 74 - 7209941 gaagctatcctcc-----catctcagcctcttgagcagctgggactacaggcatgttccaccacacccaactacttttt i manLeu1.NW_012101698v1 C 0 I 31 s calJac3.chr20 21544618 57 - 44557958 caagccatcatctcatctcatctcagcctcttgagtagc-------acagg---------------ctagctaattttg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355916 57 + 6628207 caagccatcatcccatctcatctcagcctcttgagtagc-------acagg---------------ctagctaattttt i saiBol1.JH378225 I 2 C 0 s otoGar3.GL873566 13719608 42 + 13852661 ---------------cagcgccctacccttttgagc---------cacaggtg-------------ccacccCATTTTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80475124 31 + 88915250 ------------------------------TTAAGAAACTA------------------ATCATACTTAAATAATTTAC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I a score=-3143.000000 s hg38.chr16_GL383557v1_alt 61981 8 + 89672 --atattttt s panTro5.chr16 21493438 8 - 81586097 --gtattttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555374 8 - 90481686 --gtattttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787862 8 + 3010529 --gtattttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900093 8 + 163208435 --gtattttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373866 8 - 74971481 --gtgtgtgt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086467 8 - 78541002 --gtgtgtgt i macFas5.chr20 C 0 C 0 s calJac3.chr20 21544675 2 - 44557958 --g---g--- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355973 5 + 6628207 --gtatt--- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13719650 8 + 13852661 --ATCTTTTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80475155 8 + 88915250 AGATGTCC-- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e cebCap1.NW_016107433v1 3339693 399 - 5917169 I e macNem1.NW_012011355v1 14479210 29 + 26466322 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e manLeu1.NW_012101698v1 6797354 31 - 7209941 I e chlSab2.chr5 58236959 27 + 75399963 I e cerAty1.NW_011999143v1 20806768 29 + 43916225 I a score=-847.000000 s hg38.chr16_GL383557v1_alt 61989 1 + 89672 t s panTro5.chr16 21493446 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555382 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787870 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900101 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373874 1 - 74971481 g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086475 1 - 78541002 a i macFas5.chr20 C 0 C 0 s calJac3.chr20 21544677 1 - 44557958 c i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355978 1 + 6628207 t i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340092 1 - 5917169 t i cebCap1.NW_016107433v1 I 399 C 0 s otoGar3.GL873566 13719658 1 + 13852661 C i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80475163 1 + 88915250 C i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e aotNan1.NW_018500622v1 9293841 459 - 10531588 I e macNem1.NW_012011355v1 14479210 29 + 26466322 I e colAng1.NW_012123265v1 539315 1157 + 3907144 I e manLeu1.NW_012101698v1 6797354 31 - 7209941 I e chlSab2.chr5 58236959 27 + 75399963 I e cerAty1.NW_011999143v1 20806768 29 + 43916225 I a score=8281.000000 s hg38.chr16_GL383557v1_alt 61990 1 + 89672 t s panTro5.chr16 21493447 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555383 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787871 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900102 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373875 1 - 74971481 t i rheMac8.chr20 C 0 I 19 s macFas5.chr20 21086476 1 - 78541002 t i macFas5.chr20 C 0 I 21 s colAng1.NW_012123265v1 540472 1 + 3907144 T i colAng1.NW_012123265v1 I 1157 C 0 s calJac3.chr20 21544678 1 - 44557958 t i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355979 1 + 6628207 t i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340093 1 - 5917169 t i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294300 1 - 10531588 t i aotNan1.NW_018500622v1 I 459 C 0 s otoGar3.GL873566 13719659 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80475164 1 + 88915250 T i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e macNem1.NW_012011355v1 14479210 29 + 26466322 I e manLeu1.NW_012101698v1 6797354 31 - 7209941 I e chlSab2.chr5 58236959 27 + 75399963 I e cerAty1.NW_011999143v1 20806768 29 + 43916225 I a score=20010.000000 s hg38.chr16_GL383557v1_alt 61991 2 + 89672 tt s panTro5.chr16 21493448 2 - 81586097 tt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555384 2 - 90481686 tt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787872 2 + 3010529 tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900103 2 + 163208435 tt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373895 2 - 74971481 tt i rheMac8.chr20 I 19 C 0 s macFas5.chr20 21086498 2 - 78541002 tt i macFas5.chr20 I 21 C 0 s macNem1.NW_012011355v1 14479239 2 + 26466322 tt i macNem1.NW_012011355v1 I 29 C 0 s cerAty1.NW_011999143v1 20806797 2 + 43916225 tt i cerAty1.NW_011999143v1 I 29 C 0 s chlSab2.chr5 58236986 2 + 75399963 tt i chlSab2.chr5 I 27 C 0 s colAng1.NW_012123265v1 540473 2 + 3907144 Tt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544679 2 - 44557958 tt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355980 2 + 6628207 tt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340094 2 - 5917169 tt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294301 2 - 10531588 tt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475165 2 + 88915250 CT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e manLeu1.NW_012101698v1 6797354 31 - 7209941 I e otoGar3.GL873566 13719660 0 + 13852661 C a score=24752.000000 s hg38.chr16_GL383557v1_alt 61993 2 + 89672 tt s panTro5.chr16 21493450 2 - 81586097 tt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555386 2 - 90481686 tt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787874 2 + 3010529 tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900105 2 + 163208435 tt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373897 2 - 74971481 tt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086500 2 - 78541002 tt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479241 2 + 26466322 tt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806799 2 + 43916225 tt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236988 2 + 75399963 tt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797385 2 - 7209941 tt i manLeu1.NW_012101698v1 I 31 C 0 s colAng1.NW_012123265v1 540475 2 + 3907144 tt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544681 2 - 44557958 tt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355982 2 + 6628207 tt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340096 2 - 5917169 tt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294303 2 - 10531588 tt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475167 2 + 88915250 TT i canFam3.chr5 C 0 I 129 e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C e otoGar3.GL873566 13719660 0 + 13852661 C a score=1032597.000000 s hg38.chr16_GL383557v1_alt 61995 112 + 89672 ttt----gtagagacagggtctcactatgttgcccagactggtcttgaactccagcctcaacctcctaaagtactgagattacaggcgtgaatcaccatacccagccTAAGGCAAC s panTro5.chr16 21493452 110 - 81586097 t------gtagagacagggtctcactatgttgcccagactggtcttgaactccagcctcaacctcctaaagtactgagattacaggcgtgaatcaccatacccagccTAAGGCAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555388 110 - 90481686 g------tgagagacagggtctcactatgttgcccagactggtcttgaactccagcctcaacctcctaaagtactgagattacaggcgtgaatcaccatacccagccTAAGGCAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787876 116 + 3010529 ttttttggtagagacagggtctcactatgttgcccagactggtcctgaactccagcctcaacctcctaaagtactgagattacaggcgtgaatcaccatacccagtcTAAGGCAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900107 113 + 163208435 tttt---gtagagacagggtctcgctatgttgcccagactggtcttgaactccagcctcagcctcctaaagtactgagattacaggcatgaatcaccatacccagccTAAGGCAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21373899 111 - 74971481 ttt----gtagagacaggttctcactatgttgcccagactggtcttgaactccagcctcagcctcctagagtgctgagattataggagtgaatcaccATA-CCAGACTAAGGCAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086502 111 - 78541002 ttt----gtagagacaggttctcactatgttgcccagactggtcttgaactccagcctcagcctcctagagtgctgagattataggagtgaatcaccata-ccAGACTAAGGCAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479243 111 + 26466322 ttt----gtagagacaggttctcactatgttgcccagactggtcttgaactccagcctcagcctcctagagtgctgagattataggagtgaatcaccATA-CCAGACTAAGGCAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806801 112 + 43916225 ttt----gtagagacaggttctcactatgttgcccagactggtcttgaactccagcctcagcctcctagagtgctgagattataggagtgaatcaccatacccagACTAAGGCAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58236990 112 + 75399963 ttt----gtagagacaggttctcactatgttgcccagactggtcttgaactccagcctcagcctcctagagtgctgagattataggagtgaatcaccatacccagACTAAGGCAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797387 112 - 7209941 ttt----gtagagacaggttctcactatgttgcccagactggtcttgaactccagcctcagcctcctagagtgctgagattataggagtgaatcaccatacccagACTAAGGCAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540477 112 + 3907144 ttt----gtagagacaggttctcattatgttgcccagactggtcttgaactccagccgcagcctcctagagtgctgagattagaggagtgaatcaccatacccagACTAAGGCAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544683 112 - 44557958 ttt----gtagagactgggtcacactatgttgcctagaccggtcttgaactccagtctcagcctcctaaagtgctgggactacagctgtaaatcaccatacccagccTAAGGCAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6355984 112 + 6628207 ttt----gtagagactgggtctcactatgttatccagactgctcttgaactccagtctcagcctcctaaagtgctgggattacagctgtgaatcaccatacccagccTAAGGCAAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340098 112 - 5917169 ttt----gtagagactaggtctcactatgttgcccagactggtcttgaactccagcctcagcctgctaaagtgctgggattaccgctgtgaatcaccatacccagccTAAGGCAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294305 112 - 10531588 ttt----gtagagactgggtctcactatgttgcccagactggtcttgacctccagtctcaacctcctaaagtgctgggattatagctgtgaatcatcatacccagccTAAGGCAAC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13719660 72 + 13852661 -----------AGACAGAAAATC--TATGATTCTCTTATT--------------------ATCTTAGGAAGTGATGTTAATCAAGGGCTTTAAGACCTAA---AGTCT-------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80475169 129 + 88915250 I e micMur3.chr20 54943005 59 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951217 54 + 9850184 I e dasNov3.JH569970 931336 0 + 1009443 C a score=587275.000000 s hg38.chr16_GL383557v1_alt 62107 52 + 89672 TGACAACTGGCAAGCTACAAATGCATCAAGAAGCTAATCACATTTG------AGT---------AAT s panTro5.chr16 21493562 61 - 81586097 TGACAACTGGCAAGCTACAAATGCATCAAGAAGCTAATCACATTTG------AGTCATTTGAGTAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555498 61 - 90481686 TGACAACTGGCAAGCTACAAATGCATCAAGAAGCTAATCACATTTG------AGTCATTTGAGTAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 787992 61 + 3010529 TGACAACTGGCAAGCTACAAATGCATCAAGAAGCTAATCACATTTG------AGTCATTTGAGTAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900220 49 + 163208435 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374010 49 - 74971481 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086613 49 - 78541002 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479354 49 + 26466322 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806913 49 + 43916225 TGACAACTGACAAGTTACAGACGCATCAAGAAGCTAATCACATTTG------AGT------------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237102 49 + 75399963 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797499 49 - 7209941 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540589 49 + 3907144 TGACAACTGGCAAGTTACAAATGCATCAAGAAGCTAATCACATTTG------AGT------------ i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544795 45 - 44557958 TGACAACTGGAAAGTTACAAATGCATCAGGAAGCT-ATCACATCTG--------------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356096 34 + 6628207 TGACAACTGGAAAGTTACAAATGCATCAAGAAGC--------------------------------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340210 46 - 5917169 TGACAACTGGAAAGTTACAAATGCATCAAGAAGCTAATCACATCTG--------------------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294417 51 - 10531588 TGACAACTGG-AAGTTACAAATGCATCAAGAAGCTAATCATATCTGAATAAT--------------- i aotNan1.NW_018500622v1 C 0 I 281 s micMur3.chr20 54943064 49 + 72247402 TGACAATCGGCAGGTTACAAATGCATCAAGAAGCTAATCATACTTG------AAT------------ i micMur3.chr20 I 59 I 705 s proCoq1.NW_012152729v1 2951271 49 + 9850184 TGACAACTGGCAGGTTACAAATTTATCAAGAAGCTAATCATATTTG------AAT------------ i proCoq1.NW_012152729v1 I 54 I 331 s otoGar3.GL873566 13719732 49 + 13852661 TGACAACTAGCAAGACACAAATGCATCAAGAAGCTAATTATACTTG------AAT------------ i otoGar3.GL873566 C 0 I 3 s dasNov3.JH569970 931336 39 + 1009443 TGGAAACTGGCAAGTTAAAAATGCATCAATAATTT----ATAT------------------------ i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475169 129 + 88915250 I e mm10.chr8 22478457 155 - 129401213 I a score=33813.000000 s hg38.chr16_GL383557v1_alt 62159 9 + 89672 CAGTAATTT s panTro5.chr16 21493623 9 - 81586097 CAGTAATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555559 9 - 90481686 CAGTAATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788053 9 + 3010529 GAGTAATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900269 5 + 163208435 ----AATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374059 5 - 74971481 ----AATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086662 5 - 78541002 ----AATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479403 5 + 26466322 ----AATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806962 5 + 43916225 ----AATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237151 5 + 75399963 ----AATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797548 5 - 7209941 ----AATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540638 5 + 3907144 ----AATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544840 8 - 44557958 -AATAATTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356130 1 + 6628207 --------T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340256 8 - 5917169 -AATAATTT i cebCap1.NW_016107433v1 C 0 C 0 s otoGar3.GL873566 13719784 9 + 13852661 TTATAGATT i otoGar3.GL873566 I 3 I 1763 s dasNov3.JH569970 931375 9 + 1009443 GAATAATTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475169 129 + 88915250 I e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e aotNan1.NW_018500622v1 9294468 281 - 10531588 I a score=88926.000000 s hg38.chr16_GL383557v1_alt 62168 11 + 89672 ACAGAACTCTC s panTro5.chr16 21493632 11 - 81586097 ACAGAACTCTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555568 11 - 90481686 ACAGAACTCTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788062 11 + 3010529 ACAGAACTCTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900274 11 + 163208435 ACAGAACTCTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374064 11 - 74971481 ACAGACCTCGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086667 11 - 78541002 ACAGACCTCGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479408 11 + 26466322 ACAGACCTCGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806967 11 + 43916225 ACAGACCTCGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237156 11 + 75399963 ACAGACTTCGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797553 11 - 7209941 ACAGACCTCGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540643 11 + 3907144 ACAGACCTCGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21544848 11 - 44557958 ACACACCTCTC i calJac3.chr20 C 0 I 244 s saiBol1.JH378225 6356131 11 + 6628207 ACAGACCTCTC i saiBol1.JH378225 C 0 I 2 s cebCap1.NW_016107433v1 3340264 11 - 5917169 ACAGACCTCTC i cebCap1.NW_016107433v1 C 0 C 0 s dasNov3.JH569970 931384 11 + 1009443 ACAGATCTTCC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475169 129 + 88915250 I e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e aotNan1.NW_018500622v1 9294468 281 - 10531588 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=17915.000000 s hg38.chr16_GL383557v1_alt 62179 3 + 89672 -CTt s panTro5.chr16 21493643 3 - 81586097 -Ctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555579 3 - 90481686 -CTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788073 3 + 3010529 -Ctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900285 3 + 163208435 -Ctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374075 3 - 74971481 -Ctc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086678 3 - 78541002 -Ctc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479419 3 + 26466322 -Ctc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806978 3 + 43916225 -Ctc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237167 3 + 75399963 -Ctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797564 3 - 7209941 -Ctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540654 3 + 3907144 -Ctc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545103 3 - 44557958 -ttc i calJac3.chr20 I 244 I 4 s saiBol1.JH378225 6356144 3 + 6628207 -CTC i saiBol1.JH378225 I 2 I 4 s cebCap1.NW_016107433v1 3340275 3 - 5917169 -CTC i cebCap1.NW_016107433v1 C 0 I 4 s dasNov3.JH569970 931395 3 + 1009443 CCT- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475169 129 + 88915250 I e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e aotNan1.NW_018500622v1 9294468 281 - 10531588 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=153.000000 s hg38.chr16_GL383557v1_alt 62182 1 + 89672 -t s panTro5.chr16 21493646 1 - 81586097 -t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555582 1 - 90481686 -T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788076 1 + 3010529 -t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900288 1 + 163208435 -t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374078 1 - 74971481 -t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086681 1 - 78541002 -t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479422 1 + 26466322 -t i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806981 1 + 43916225 -t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237170 1 + 75399963 -t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797567 1 - 7209941 -t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540657 1 + 3907144 -t i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545110 1 - 44557958 -c i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6356151 1 + 6628207 -t i saiBol1.JH378225 I 4 C 0 s cebCap1.NW_016107433v1 3340282 1 - 5917169 -t i cebCap1.NW_016107433v1 I 4 C 0 s aotNan1.NW_018500622v1 9294749 1 - 10531588 -c i aotNan1.NW_018500622v1 I 281 C 0 s dasNov3.JH569970 931398 1 + 1009443 G- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80475169 129 + 88915250 I e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=50133.000000 s hg38.chr16_GL383557v1_alt 62183 4 + 89672 tttt s panTro5.chr16 21493647 4 - 81586097 tttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555583 4 - 90481686 tttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788077 4 + 3010529 tttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900289 4 + 163208435 tttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374079 4 - 74971481 tttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086682 4 - 78541002 tttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479423 4 + 26466322 tttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806982 4 + 43916225 tttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237171 4 + 75399963 tttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797568 4 - 7209941 tttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540658 4 + 3907144 tttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545111 4 - 44557958 tttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356152 4 + 6628207 tttt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340283 4 - 5917169 tttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294750 4 - 10531588 tttt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475298 4 + 88915250 TGTT i canFam3.chr5 I 129 C 0 s dasNov3.JH569970 931399 4 + 1009443 CTTT i dasNov3.JH569970 C 0 I 192 e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=-17771.000000 s hg38.chr16_GL383557v1_alt 62187 5 + 89672 ttttt s panTro5.chr16 21493651 5 - 81586097 ttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555587 2 - 90481686 tt--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788081 5 + 3010529 ttttt i gorGor5.CYUI01000018v1 C 0 I 2 s nomLeu3.chr2 53900293 5 + 163208435 tttgt i nomLeu3.chr2 C 0 I 11 s rheMac8.chr20 21374083 1 - 74971481 t---- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086686 1 - 78541002 t---- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479427 1 + 26466322 t---- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806986 1 + 43916225 t---- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237175 1 + 75399963 t---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797572 1 - 7209941 t---- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540662 1 + 3907144 t---- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545115 1 - 44557958 t---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356156 1 + 6628207 t---- i saiBol1.JH378225 C 0 I 229 s cebCap1.NW_016107433v1 3340287 1 - 5917169 t---- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294754 1 - 10531588 t---- i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475302 1 + 88915250 T---- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e dasNov3.JH569970 931403 192 + 1009443 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=370.000000 s hg38.chr16_GL383557v1_alt 62192 1 + 89672 t s gorGor5.CYUI01000018v1 788088 1 + 3010529 t i gorGor5.CYUI01000018v1 I 2 C 0 s nomLeu3.chr2 53900309 1 + 163208435 g i nomLeu3.chr2 I 11 C 0 s calJac3.chr20 21545116 1 - 44557958 t i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356386 1 + 6628207 t i saiBol1.JH378225 I 229 C 0 s cebCap1.NW_016107433v1 3340288 1 - 5917169 t i cebCap1.NW_016107433v1 C 0 I 250 s aotNan1.NW_018500622v1 9294755 1 - 10531588 t i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475303 1 + 88915250 C i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e dasNov3.JH569970 931403 192 + 1009443 I e panPan2.chr16 21555589 0 - 90481686 C e macNem1.NW_012011355v1 14479428 0 + 26466322 C e rheMac8.chr20 21374084 0 - 74971481 C e macFas5.chr20 21086687 0 - 78541002 C e colAng1.NW_012123265v1 540663 0 + 3907144 C e manLeu1.NW_012101698v1 6797573 0 - 7209941 C e chlSab2.chr5 58237176 0 + 75399963 C e cerAty1.NW_011999143v1 20806987 0 + 43916225 C e otoGar3.GL873566 13719793 1763 + 13852661 I e panTro5.chr16 21493656 0 - 81586097 C a score=10035.000000 s hg38.chr16_GL383557v1_alt 62193 1 + 89672 g s panTro5.chr16 21493656 1 - 81586097 g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555589 1 - 90481686 g i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788089 1 + 3010529 g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900310 1 + 163208435 g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374084 1 - 74971481 g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086687 1 - 78541002 g i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479428 1 + 26466322 g i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806987 1 + 43916225 g i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237176 1 + 75399963 g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797573 1 - 7209941 g i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540663 1 + 3907144 g i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545117 1 - 44557958 g i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356387 1 + 6628207 g i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9294756 1 - 10531588 g i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475304 1 + 88915250 A i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e dasNov3.JH569970 931403 192 + 1009443 I e cebCap1.NW_016107433v1 3340289 250 - 5917169 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=1227750.000000 s hg38.chr16_GL383557v1_alt 62194 128 + 89672 ttaatagtgatggggtttcacca-------------------------------tg-----gtgcccaggctggttttgaattcctgggctgag---------------------gagatccacctgccttggcct--cccaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG s panTro5.chr16 21493657 128 - 81586097 ttaatagtgatggggtttcacca-------------------------------tg-----gtgcccaggctggttttgaattcctgggctgag---------------------gagatccacctgccttggcct--ccaaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555590 128 - 90481686 ttaatagtgatggggtttcacca-------------------------------tg-----gtgcccaggctggttttgaattcctgggctgag---------------------gagatccacctgccttggcct--ccaaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788090 127 + 3010529 ttaatagtgat-gggtttcacca-------------------------------tg-----gtgcccaggctggtcttgaattcctgggctgag---------------------gagatccacctgccttggcct--cccaaagtgctgggattacaggtatgagctaccaagcccagcTTGCTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900311 149 + 163208435 ttaatagtgatggggttttacca-------------------------------tg-----gtgcccaggctggtcttgaactcctgggctgaggagatccacctgccttggcctgagatccacctgccttggcct--cccaaactgctgggattacaggtatgagctaccaagcccagccTGCTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374085 161 - 74971481 tgaatagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcttgaactcctgggctgag---------------------gagatccacctgccttggtgtcccccaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086688 159 - 78541002 tgaatagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcttgaactcctgggctgag---------------------gagatccacctgccttggtgt--cccaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479429 159 + 26466322 ttaatagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcttgaactcctgggctgag---------------------gagatccacctgccttggtgt--cccaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20806988 159 + 43916225 ttaatagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcttgaactcctgggctgag---------------------gagatccacctgccttggcgt--cccaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237177 159 + 75399963 ttaatagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcttgaactcctgggctgag---------------------gagatccacctgccttggcct--cccaaagtgctgggattacaggtatgagctaccaagctcagtcTGCTTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797574 159 - 7209941 ttaacagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcttgaactcctgggctgag---------------------gagatccacctgccttggcgt--cccaaagtgctgggattacaggtatgagctaccaagcccagccTGCTTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540664 159 + 3907144 ttaatagtgatggggttttgccatggtgcccaggtatttgagtagtgcccaggttg-----gtgcccaggctggtcctgaactcctgggctgag---------------------gagatccacctgccttggcct--cccaaagtgctgggattataagtatgagctaccaagcccagccTGCTTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545118 132 - 44557958 taaacagtgatgaggttttgcca-------------------------------tggtgccgtgccaaggctggtcttgaacttctgagctaag---------------------gagatccacctgccttggcct---ccaaagtgctaggattacaggtgtgagataccaagcccagACTGCTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356388 128 + 6628207 ttaatagtgatggggttttgcca-------------------------------tg-----gtgccaaggctggtcttgaacttctgggctaag---------------------gagacccacctgccttggcct--cccaaagtgctaggattacaggtgtgagctaccaagcccagccTGCTTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340539 128 - 5917169 ttaatagtgatggggttttgcca-------------------------------tg-----gtgccaaggctggtcttgaacttctgggctaag---------------------gagatccacctgccttggcct--cccaaagtgctaggattacaggtgtgcgctaccaagcccagccTGCTTG i cebCap1.NW_016107433v1 I 250 C 0 s aotNan1.NW_018500622v1 9294757 128 - 10531588 ttaatagtgatggggttttgcca-------------------------------tg-----gtgccaaggctggttttgaacttctgggctaag---------------------gagatccatctgccttggcct--cccaaagtgctaggattacaggtgtgagctaccaagcccagccTGCTTG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80475305 65 + 88915250 TATATAGTGGAAAGGCT-------------------------------------TA-------GCCCAGAATGG----GAAGTCAC------AA---------------------TAAATCCAA------TGACTT--CC--ACTTGTTG------------------------------------- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943113 705 + 72247402 I e mm10.chr8 22478457 155 - 129401213 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e dasNov3.JH569970 931403 192 + 1009443 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=54575.000000 s hg38.chr16_GL383557v1_alt 62322 6 + 89672 AC-ATTT s panTro5.chr16 21493785 6 - 81586097 AC-ATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555718 6 - 90481686 AC-ATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788217 6 + 3010529 AC-ATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900460 6 + 163208435 AC-ATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374246 6 - 74971481 AC-ATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086847 6 - 78541002 AC-ATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479588 6 + 26466322 AC-ATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807147 6 + 43916225 AC-ATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237336 6 + 75399963 AC-ATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797733 6 - 7209941 AC-ATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540823 6 + 3907144 AC-ATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545250 6 - 44557958 AT-ATCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356516 7 + 6628207 ATAATCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340667 6 - 5917169 AT-ATCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294885 6 - 10531588 AT-ACCT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22478612 6 - 129401213 AC-TTTT i mm10.chr8 I 155 C 0 s canFam3.chr5 80475370 6 + 88915250 AA-ATTT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54943113 705 + 72247402 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e dasNov3.JH569970 931403 192 + 1009443 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=1032673.000000 s hg38.chr16_GL383557v1_alt 62328 98 + 89672 ATCCTATGGAACA--CTCCAAC---AAGT--AAAA----TTT-AAAGCC-AGCTCTCATGACAACAAAGACTCTACCCTCAGCGCCAA---C---ATTTCTCACTACTTACGCATTT s panTro5.chr16 21493791 98 - 81586097 ATCCTATGGAACA--CTACAAC---AAGT--AAAA----TTT-AAAGCC-AGCTCTCATGACAACAAAGACTCTACCCTCAGCGCCAA---C---ATTTCTCACTACTTACGCATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555724 98 - 90481686 ATCCTATGGAACA--CTCCAAC---AAGT--AAAA----TTT-AAAGCC-AGCTCTCATGACAACAAAGACTCTACCCTCAGCGCCAA---C---ATTTCTCACTACTTACGCATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788223 98 + 3010529 ATCCTATGGAACA--CTCCAAC---AAGT--AAAA----TTT-AAAGCC-AGCTCTCATGCCAACAAAGACTCTACCCTCAGCACCAA---C---ATTTCTCACTACTTACGCATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900466 98 + 163208435 ATCCTATGGAACA--CTCCAAC---AAGT--ACAA----TTT-AAAGCC-AGCTCTCATGCCAACAAAGACTCTACCCTCAGCGCCAA---C---ATTTCTCACTACTTATGCATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374252 98 - 74971481 ATCCTATGGAACA--CTCCAAC---AAGC--AAAA----TTTAAAAGCC-AGCTTTCACGCCAACAAAGACTCTA-CCTCAGTGCCAA---C---GTTTCTCACTACTCACGCATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086853 97 - 78541002 ATCCTATGGAACA--CTCCAAC---AAGC--AAAA----TTT-AAAGCC-AGCTTTCACGCCAACAAAGACTCTA-CCTCAGTGCCAA---C---GTTTCTCACTACTTACGCATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479594 97 + 26466322 ATCCTATGGAACA--CTCCAAC---AAGC--AAAA----TTT-AAAGCC-AGCTTTCACGCCAACAAAGACTCTA-CCTCAGTGCCAA---C---GTTTCTCACTACTTACGCATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807153 97 + 43916225 ATCCTATGGAACA--CTCCAAC---AAGC--AAAA----TTT-AAAGCC-AGCTTTCACGACAACAAAGACTCTA-CCTCAGTGCCAA---C---GTTTCTCACTACTTACGCATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237342 97 + 75399963 ATCCTATGGAACA--CTCCAAC---AAGC--AAAA----TTT-AAAGCC-AGCTTTCACACCAACAAAGACTCTA-CCTCAGCGCCAA---C---GTTTCTCACTACTTACGCATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797739 97 - 7209941 ATCCTATGGAACA--CTCCAAC---AAGC--AAAA----TTT-AAAGCC-AGCTTTCACGCCAACAAAGACTCTA-CCTCAGTGCCAA---C---GTTTCTCACTACTTACGCATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540829 97 + 3907144 ATCCTATGGAACA--CTCCAAC---AAGG--AAAA----TTT-AAAGCC-AGCTTTCATGCCAACAAAGACTCTA-CCTCAGCGCCAA---T---GTTTCTCACTACTTACGCATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545256 97 - 44557958 ATCCTATGGAGCA--CTCCAAC---AAGT--AAAA----TTT-AAAGCC-AACTTTCACGCCAACAAAAACGCTA-CCTCAGCGCCAA---C---ATTTCTCACTAACCATGCATTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356523 100 + 6628207 ATCCTATGGAACA--CTCCAACAAGAAGT--AAAA----TTT-AAAGCC-AACTTTTACGCCAACAAAAACGCTA-CCTCAGCGCCAA---C---ATTTCTCACTAACCATGCATTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340673 100 - 5917169 ATCCTATGGAACA--CTCCCATAAGAAGT--AAAA----TTT-AAAGCC-AACTTTCACGCCAACAAAAACGCTA-CCTCAGCGTCAA---C---ATTTCTCACTAACCATGCATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294891 100 - 10531588 ATCCTATGGAACA--CTCCAACAAGAAGT--AAAA----TTT-AAAGCC-AACTTTCACGCCAACAAAAACACTA-CCTCAGTGCCAA---C---ATTTCTCACTAACCATGCATTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22478618 104 - 129401213 ATTCCTTGAAATA--TTCTCA----AATT--AGAAGTGCTTC-AGAGAAGAACATTCATTCTAACAAAGATGCCA-CATGAGTACCAAGATC---ACTGCTCACTACAAATGTCTCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80475376 101 + 88915250 ATCTGGTGGAAAATTCTCCATTTAGAAGT--CACA----TTT-AAAGCC-AGCTTTAAC----ACAAAGACACCA-CCTGAGCGCCAC---CATGATTTCTCACTAGGTATGTATTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931595 92 + 1009443 ATCTTGTGGAACA-TTTTCAATCAGAAGTCAAAAA----TTCAAAAGCC-AGCTTG---------------ACTA-ACTGAGTTCCAAGACC---ATTTCTCACTATCTGTGCATTT i dasNov3.JH569970 I 192 C 0 e micMur3.chr20 54943113 705 + 72247402 I e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=588210.000000 s hg38.chr16_GL383557v1_alt 62426 42 + 89672 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG s panTro5.chr16 21493889 42 - 81586097 CATTTTGGT--TAGGTATGATGTGCCTTCCTCTAACCTACTAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555822 42 - 90481686 CATTTTGGT--TAGGTATGATGTGCCTTCCTCTAACCTACTAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788321 42 + 3010529 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900564 42 + 163208435 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTCAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374350 42 - 74971481 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086950 42 - 78541002 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479691 42 + 26466322 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807250 42 + 43916225 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237439 42 + 75399963 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797836 42 - 7209941 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540926 42 + 3907144 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545353 38 - 44557958 CATTTTGGT------TATGATGTGCCTGCCTCTAACCTACTAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356623 42 + 6628207 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340773 42 - 5917169 CATTTTGGT--TAAGTATGATGTGCCTGCCTCTAACCTACTAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9294991 42 - 10531588 CATTTTGGT--TAAGTATGATATGCCTGCCTCTAACCTACTAAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54943818 42 + 72247402 CATTTTAGT--TAAGTATAATGCACCTGCCTCTTACCTAGTGAG i micMur3.chr20 I 705 C 0 s mm10.chr8 22478722 40 - 129401213 CACACAGGG---AAGTACGACTTCCCTG-CTCTAACCTACTAAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80475477 42 + 88915250 CATTCTGGT--TAAGTATTATGTGCATACCTCTCATATGTTGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931687 44 + 1009443 CATTTTGACTATAAATATGATGTACCTGCCTCTAAACTATAGAG i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2951320 331 + 9850184 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=4588174.000000 s hg38.chr16_GL383557v1_alt 62468 296 + 89672 GCAAGAACAATAAAA--CATATACA-AGGGACAGCCAG---CCTCAAAAAGGTGACTTGTCTCCCACAAGCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---TGGTATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGATGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA s panTro5.chr16 21493931 296 - 81586097 GCAAGAACAATAAAA--CATATACA-AGGGACAGCCAG---CCTCAAAAAGGTGACTTGTCTCCCACAAGCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---TGGTATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21555864 296 - 90481686 GCAAGAACAATAAAA--CATATACA-AGGGACAGCCAG---CCTCAAAAAGGTGACTTGTCTCCCACAAGCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---TGGTATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788363 296 + 3010529 GCAAGAACAATAAAA--CATATATA-AGGGACAGCCAG---CCTCAAAAAGGTGACTTGTCTCCCACAAGCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGACT-GTGGAGTTTATTACATTT---TGGTATCACAA--AGGAACCAACTATCCAGAATAAAAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900606 296 + 163208435 GCAAGAACAATAAAA--CATATACA-AGGGACAGCCAG---CCTCAAAAAGGTGACTTGTCTCCCACAAGCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCTGATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374392 296 - 74971481 GCAAAAACAATAAAA--CATATACA-AGGGACAGCCAG---CTTCAAAAAGGTGATTTGTTTCCCACAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCAATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21086992 296 - 78541002 GCAAAAACAATAAAA--CATATACA-AGGGACAGCCAG---CTTCAAAAAGGTGATTTGTTTCCCACAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCAATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14479733 296 + 26466322 GCAAAAACAATAAAA--CATATACA-AGGGACAGCCAG---CTTCAAAAAGGTGATTTGTTTCCCACAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCAATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807292 296 + 43916225 GCAAAAACAATAAAA--CATATACA-AGGAACAGCCAG---CTTCAAAAAGGTGATTTGTTTCCCAGAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGATGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237481 296 + 75399963 GCAAAAACAATAAAA--CATATACA-AGGGACAGCCAG---CTTCAAAAAGGTGATTTGTTTCCCACAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6797878 296 - 7209941 GCAAAAACAATAAAA--CATATACA-AGGGACAGCCAG---CTTCAAAAAGGTGATTTGTTTCCCACAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---GGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGATGACATCTGATTCATTCGTGGGAGGAAATGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 540968 296 + 3907144 GCAAAAACAATAAAA--CATATACA-AGGGACAGCCAG---CTTCAAAAAGGTGATTTGTCTCCCACAATCCAGGTTCTCTGCATGGAAACTGAAGGTGCT---CTTATCTTCCGATT-GTGGAGTTTATTACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACAACACAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCCGGACGACATCTGATTCATTCGTGGGAGGAAATGGATTGTACAGTAAGGTTCTGTCATTTGGAAGGGGCTAAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545391 296 - 44557958 GCAAGAACAATAAAA--CATATACA-AGGGATAGGCAG---CCTCAGAAAGGTCACTTGTCTCCCACAAACCAGGTTCTCTGCATGGAAAATGAAGGTGCT---CTTATCTTCCCTTT-GGGGAGTTTATGACATTT---CGATATCATAA--AGGAACCAACTATCCAGGATAACACCATGAAATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCTGGACGACATCTGATTCATTCGTGGGAGGAAACGGATTGTAGAATAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356665 297 + 6628207 GCAAGAACAATAAAA--TATATACA-AGGGATAGGCAG---CCTGAGAAAGGTCACTTGTCTCCCACAAACCAGGATCTCTGCATGGAAAATGAAGGTGTT---CTTATCTTCCCTTTGGGGGAGTTTATTACATTT---CGGTATCACAA--AGGAACCAACTATCCAGAATAACATCACAACATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCTGGACGACATCTGATTCATTCGTGGGAGGAAACGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3340815 296 - 5917169 GCAAGAACAATAAAA--CATATACA-AGGGATAGGCAGTGACCTCAGAAAGGTCACTTGTCTCCCACAAACCAGGTTCTCTGCATGGAAAATGAAGGTGCT---CTTATCTTCCCTTT-GGGGATTTTATTACATTT---CAGTATCACAA--AGGAACCAGCTATCTAGAATAACACCACAACATGTTTTACCTTATATATCTTAGAAATTTTAAAAGCATGAGCTGTGCGCCTCTG---GACATCTGATTCATTCGTGGGAGGAAACGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295033 296 - 10531588 GCAAGAACAATAAAA--CATATACA-AAGGATAAGCAG---TCTCAGAAAGGTCATTTGTCTCCCACAAACCAGGTTCTCCGCATGGAAAATGAAGGTGCT---CTTATCTTCCCTTT-GGGGAGTTTATCACATTT---TGATATCACAA--AGGAACCAACTATCCAGAATAACACCACAAAATGTTTTACCTTATATATCTTAGATATTTTAAAAGCATGAGCTGTGCGCCTCTGGACGACATCTGATTCATTCGTGGGAGGAAACGGATTGTAGAGTAAGGTTTTGTCATTTGGAAGGGGCTAAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54943860 298 + 72247402 GCAAGAATAATGAAA--TACACACA-AGGGACAGACAG---CCTCAGAAAGGTCACTTGTCTACCTCAAACCAGGTTCTCCATAAGTAAAATGAAGGTGCT---CTTATCTTCCTATT-ATGGAGCTCATTACATTTTCATAATATTACAA--AGGAACCAACTGTCCAGAAT-ACAACACACCATGTTTTACCTTATATATCTTAGAAATTTTAAAGGCATGGGCTGTGCGCCTCCGGACGACATCTGATTCATTCATGGGAGGAAGTGGATTGTAGAGTAAGGTTTTGTCACTTGGAAGGGGCTAAAAA i micMur3.chr20 C 0 I 114 s proCoq1.NW_012152729v1 2951651 298 + 9850184 GCAAGAACAATGAAA--TATACACA-AGGGACAGACAG---CCTCAGAAAGGTCACCTGTCTCCCCCAAACCAGGTTCTCCGTATGTAAAATGAAGGTGCT---CTTGTCTTCCTATT-ATGGAGCTCATTACATTTTCATAATATCACAA--AGGAACCAACTGTCCAGAAT-ACAACACAACATGTTTTACCTTATATATCTTAGAAATTTTAAATGCATGGGCCGTGCGCCTCCGGACGACATCTGATTCATTCATGGGAGGAAGTGGATTGTAGAGTAAGGTTTTGTCACTTGGAAGGGGCTAAAAA i proCoq1.NW_012152729v1 I 331 C 0 s mm10.chr8 22478762 287 - 129401213 -----AACAGTGAAC--CACAGCTACAGCAACAGACAA---CTTC---AAGGTTGTTCCTCTCCC--AAGTCAGGGTCTCTACCTGCTAATGGAAGAAGACAGGCTTGTCTTCTAACT-GTTAG--TTGTTACATTT---TGCTAACATCGCCAGGAAGCAACCAACCAGGGT-ACAGTACGGG--GTTTTACCTTATATATCTTTGACATTTTAAACCCATGGGTTGTCCGCCTCAAGAAGACATCTGATTCATTTTTCGGAGGAAGTGGATTATAAAGCACAGTTTTCTCATTTGGAAGTGGCTGAAAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80475519 290 + 88915250 GTGTGAATAATGAAATGCAAACATA-AGGGACAAACAT---CCTCAGAAAGGT-ACTTGACT-TTACAAACCAGGCTCTCTGCACATAA----AAGGTGCT---CTTGTCTGCCTACT-GTGGAG---ATTACATTTTGATAATATCACA---AGGAACCAACCATCTAGAAT-ATAATGCAAGATGTTTTACCTTATATATCTTAGAAATTTTAAAGGCATGGGCGGTACGCCTCCTGATAACATCTGATTCGTTCGTGGGAGGAAGTGGATTGTAGAATAAGGTTTTGTCATTTGGAAGAGGCTAAAAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 931731 289 + 1009443 GCAAGAACAATAAAAACAAGACATA-GGGGATAT-------TCTCAAAAAGGTAAACTGTCTCCCCAAAATGTGGTCCTCTGCATGTAAAATGAAGGTGTT---ACTGTCTTT---TT-GAGAAATTTAGTACATTTTTATAACATCACA---AGCAATCAACTATCCGGAAT-ACAACAAAAGATGTCTTACCTTGTATTTCTTAGAAATTTTAAAGGCATGGGCCGTGCGCTTCC---TGACATCTGGTTCATTTGTGACAGAAAGTGGACTGTACAGTAAAGTTTTGTCATTTGGAAGAGGCTAAAAA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13719793 1763 + 13852661 I a score=145040.000000 s hg38.chr16_GL383557v1_alt 62764 13 + 89672 AACAAAG--ACACAT s panTro5.chr16 21494227 13 - 81586097 AACAAAG--ACACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556160 13 - 90481686 AACAAAG--ACACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788659 13 + 3010529 AACAAAG--ACACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900902 13 + 163208435 AACAAAG--ACACAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374688 13 - 74971481 GACAAAG--ATACAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087288 13 - 78541002 GACAAAG--ATACAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480029 13 + 26466322 GACAAAG--ATACAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807588 13 + 43916225 GACAAAG--ATACAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237777 13 + 75399963 GACAAAG--ATACAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798174 13 - 7209941 GACAAAG--ATACAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541264 13 + 3907144 GACAAAG--ATACAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545687 15 - 44557958 GACAAAGAGATATAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356962 15 + 6628207 GACAAAGATATATAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341111 15 - 5917169 GACAAAGATATATAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295329 15 - 10531588 GACAAAGATACACAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2951949 13 + 9850184 GACAAAG--ACATAC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22479049 12 - 129401213 GACAAGG--ATA-AT i mm10.chr8 C 0 C 0 s canFam3.chr5 80475809 13 + 88915250 GACAAAG--GCATAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 932020 13 + 1009443 GATAAAA--ATATAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54944158 114 + 72247402 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=83158.000000 s hg38.chr16_GL383557v1_alt 62777 6 + 89672 TG--TTTA- s panTro5.chr16 21494240 6 - 81586097 TG--TTTA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556173 6 - 90481686 TG--TTTA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788672 6 + 3010529 TG--TTTA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900915 6 + 163208435 TG--TTTA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374701 6 - 74971481 TG--TTTA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087301 6 - 78541002 TG--TTTA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480042 6 + 26466322 TG--TTTA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807601 8 + 43916225 TGTTTTTA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237790 6 + 75399963 TG--TTTA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798187 6 - 7209941 TG--TTTA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541277 6 + 3907144 TG--TTTA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545702 6 - 44557958 CG--TTTA- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356977 6 + 6628207 TG--TTTA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341126 6 - 5917169 TG--TTTA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295344 6 - 10531588 CG--TTTA- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54944272 6 + 72247402 TG--TTTA- i micMur3.chr20 I 114 C 0 s proCoq1.NW_012152729v1 2951962 6 + 9850184 TG--TTTA- i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22479061 6 - 129401213 TA--TTTA- i mm10.chr8 C 0 I 1773 s canFam3.chr5 80475822 6 + 88915250 TG--TTTA- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 932033 5 + 1009443 ----TGTAA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13719793 1763 + 13852661 I a score=680360.000000 s hg38.chr16_GL383557v1_alt 62783 52 + 89672 AATGGTTACTTTTATTGGGCTTCTGCAGACCAAAGATCTGTAGTGCATTTTG s panTro5.chr16 21494246 52 - 81586097 AATGGTTACTTTTATTGGGCTTCTGCAGACCAAAGATCTGTAGTGCATTTTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556179 52 - 90481686 AATGGTTACTTTTATTGGGCTTCTGCAGACCAAAGATCTGTAGTGCATTTTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788678 52 + 3010529 AATGGTTACTTTTATTGGGCTTCTGCAGACCAAAGATCTGTAGTGCATTTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900921 52 + 163208435 AATTGTTACTTTTATTGGACTTCTGCAGACCAAAGATCCGTAGTGCATTTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374707 52 - 74971481 AATGGTTACTTCTATTGGGCTTCCACAGACCAAAGATCTGTAGTGCATTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087307 52 - 78541002 AATGGTTACTTCTATTGGGCTTCCACAGACCAAAGATCTGTAGTGCATTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480048 52 + 26466322 AATGGTTACTTCTATTGGGCTTCCACAGACCAAAGATCTGTAGTGCATTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807609 52 + 43916225 AATGGTTACTTCTACTGGGCTTCCACAGACCAAAGATCTGTAGTGCATTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237796 52 + 75399963 AATGGTTACTTCTATTGGGCTTCCACAGACCAAAGATCTGTAGTGCATTTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798193 52 - 7209941 AATGGTTACTTCTATTGGGCTTCCACAGACCAAAGATCTGTAGTGCATTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541283 52 + 3907144 AATGGTTACTTCTATTGGGCTTCCACAGACCAAAGATCTGAGGTGCATTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545708 52 - 44557958 AATTGTGACTTTTATTGTGCTTCTTAAGACCAAAGGACTGTACTGCATTTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6356983 52 + 6628207 AATGGTTACTTTTATTGTGCTTCTATAGACCAAAGGACTGTACTGCATTTTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341132 52 - 5917169 AATGGTTACTTTTATTGTGCTTCTACAGACCAAAGGACTGTACTGCATTTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295350 52 - 10531588 AATGGTTACTTTTATTGTGCTTCTACAGACCAAAGGACTGTACTGCATTTTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54944278 52 + 72247402 AATCATAACTTTTATTGGTCTTCTATAGACCAAAGGGCTGTGGTGGTTTTTC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2951968 52 + 9850184 AATCATTACTTTCATTGGCCTTCTATAGACCAAAGGGCTGTGGTGGTTTTTC i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80475828 52 + 88915250 AATCATTATTTTTATTAGGCTTCTCCAGAACAAAGGACTATAGTGATTTTTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 932038 52 + 1009443 AATCATTGTTTTTACTGGGCTTCTACAGACCCAAGGACTACAGTGTTTTTTG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22479067 1773 - 129401213 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=387839.000000 s hg38.chr16_GL383557v1_alt 62835 29 + 89672 AGCCCAACATCATCTTCTAACCATCATAT s panTro5.chr16 21494298 29 - 81586097 AGCCCAACATCATCTTCTAACCATCATAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556231 29 - 90481686 AGCCCAACATCATCTTCTAACCATCATAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788730 29 + 3010529 AGCCCAACATCATCTTCTAACCATCATAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53900973 29 + 163208435 AGCCCAACATCATCTTCTAACCATCATAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374759 29 - 74971481 AGCCCAACATCATCTTCTAACCATCATAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087359 29 - 78541002 AGCCCAACATCATCTTCTAACCATCATAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480100 29 + 26466322 AGCCCAACATCATCTTCTAACCATCATAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807661 29 + 43916225 AGCCCAACATCATCTTCTAACCATCATAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237848 29 + 75399963 AGCCCAACATCATCTTCTAACCATCATAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798245 29 - 7209941 AGCCCAACATCATCTTCTAACCATCATAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541335 29 + 3907144 AGCCCAACATCATCTTCTAACTGTCATAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545760 29 - 44557958 AGCCCAACATCGTCTTCTATCTATCATAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6357035 29 + 6628207 AGCCCAACACCGTCTTCTAACTATCATAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341184 29 - 5917169 AGCCCAACATCATCTTCTAACTATCATAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295402 29 - 10531588 AGCCCAACATAGTCTTCTAACTATCATAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54944330 29 + 72247402 AGGCCAACACCATCTTCCAACCATCATAT i micMur3.chr20 C 0 I 118 s proCoq1.NW_012152729v1 2952020 29 + 9850184 AGGCCAACACTGTCTTCCAACCATTGTAT i proCoq1.NW_012152729v1 C 0 I 3 s canFam3.chr5 80475880 28 + 88915250 AGGCAAACACTACCCTTGAAC-ATCATAT i canFam3.chr5 C 0 I 3 e mm10.chr8 22479067 1773 - 129401213 I e dasNov3.JH569970 932090 0 + 1009443 C e otoGar3.GL873566 13719793 1763 + 13852661 I a score=735873.000000 s hg38.chr16_GL383557v1_alt 62864 79 + 89672 ATATTCAGTACCTCCCTGACATTCGTTAATTCGGGAAAACAGCTGTAGCCATAATACCTCTATTCAGAAAAACTA--------GGGG s panTro5.chr16 21494327 79 - 81586097 ATATTCAGTACCTCCCTGACATTCGTTAATTCAGGAAAACAGCTGTAGCCATAATACCTCTATTCAGAAAAACTA--------GGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556260 79 - 90481686 ATATTCAGTACCTCCCTGACATTCGTTAATTCAGGAAAACAGCTGTAGCCATAATACCTCTATTCAGAAAAACTA--------GGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788759 79 + 3010529 ATATTCAGTACCTCCCTGACATTCGTTAATTCAGGAAAACAGCTGTAGCCATGATACCTCTATTCAGAAAAACTA--------GAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53901002 79 + 163208435 ATATTCAGTACCTCCCTGACATTCATTAATTCAGGAAAACAGCTGTAGCCATGATACCTCTATTCAGAAAAACAT--------GGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374788 79 - 74971481 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATAATACTTCTATTCAGAAAAACTA--------GGGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087388 79 - 78541002 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATGATACTTCTATTCAGAAAAACTA--------GGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480129 79 + 26466322 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATGATACTTCTATTCAGAAAAACTA--------GGGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807690 79 + 43916225 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATGATACTTCTATTCAGAAAAACTA--------GGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237877 79 + 75399963 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATGGTACTTCTATTCAGAAAAACTA--------GGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798274 79 - 7209941 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATGATACTTCTATTCCGAAAAACTA--------GGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541364 79 + 3907144 ATATTCAGTACCTCCCTGACATTTGTTAATTCAGGAAAACAGCTGTAGCCATGATACCTCTATTCAGAAAAACTA--------GGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545789 87 - 44557958 ATATTGAGTACCACCCTGACATTCGTTAATTCAGGGAAACAACTGTACTCATTATACCGCTATTCAGAAAAACTGGGGGCAGTGGGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6357064 87 + 6628207 ATATTGAGTACCACCCTGACATTCATTAATTCAGGAAAACAACTGTATTCATTATATTGCTATTCAGAAAAACTGGGGGCAGTGggg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341213 85 - 5917169 ATATTGAGTACCACCCTGACATTCATTAATTCAGGAAAACAACTGAACTGATTATACCGCTATTCAGAAAAAC--GGGGCAGTGGGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295431 87 - 10531588 ATATTGAGTACCACCCTGACATTCGTTAATTCAGGAAAACAACTGTATTCATTATACCGCTATTCATAAAAACTGGGGGTAGTGGGG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2952052 36 + 9850184 ATATTCACTACCTTCCAGACCTTCCTTACTTC---------------------------------------------------GCGA i proCoq1.NW_012152729v1 I 3 C 0 s canFam3.chr5 80475911 38 + 88915250 ACATTTACTACCTCCTTGACTCCCATTACTTCAGGAAA------------------------------------------------- i canFam3.chr5 I 3 C 0 e micMur3.chr20 54944359 118 + 72247402 I e mm10.chr8 22479067 1773 - 129401213 I e dasNov3.JH569970 932090 0 + 1009443 C e otoGar3.GL873566 13719793 1763 + 13852661 I a score=677372.000000 s hg38.chr16_GL383557v1_alt 62943 77 + 89672 GG-AAAAAAAGAAGAAAAGGAGAGAGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACTGT-AGAGGG-TGGGTGT s panTro5.chr16 21494406 78 - 81586097 GGGAAAAAAAGAAGAAAAGGAGAGAGAGGGAGAAAAAGCTGAAGCTACTCTTGCAGCCACACTGC-AGAGGG-TGGGAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556339 78 - 90481686 GGGAAAAAAAGAAGAAAAGGAGAGAGAGGGAGAAAAAGCTGAAGCTACTCTTGCAGCCACACTGC-AGAGGG-TGGGAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788838 77 + 3010529 GG-AAGAAAAGAAGAAAAGGAGAGAGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACTGC-AGAGGG-TGGGAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53901081 73 + 163208435 GG-AAAAAAAGAAGAAAAG----GAGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACTGC-AGAGGG-TGGGAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374867 77 - 74971481 GG--AaaaaagaagaaaaggagaaagagagagaaagagCTGAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087467 77 - 78541002 GG--AAAAAAGAAGAAAAGGAGAAAGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480208 77 + 26466322 GG--AAAAAAGAAGAAAAGGAGAAAGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807769 77 + 43916225 GG--AAAAAAGAAGAAAAGGAGAAAGAGGGAGAAAGAGCTAAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58237956 77 + 75399963 GG--AAAAAAGAAGAAAAGGAGAGGGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798353 77 - 7209941 GG--AAAAAAGAAGAAAAGGAGAAAGAGGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541443 78 + 3907144 GG-AAAAAAAGAAGAAAAGGAGAGAGAAGGAGAAAGAGCTGAAGCTACTCTTGCAGCCACACCAC-AGAGGGTTGGGAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545876 71 - 44557958 GG--AG---AGAAGAAAAGGAGAGAGAGGGAGAAAGA--TGAAGATACTCTTACAGCAGCAACGC-AGAGGG-TGGGAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6357151 76 + 6628207 gg--agagaagaagaaaaggagagagagggagaaagagCTGAAGCTACTCTTGCAGCTGCAACAC-AGAGGG-TGGGAAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341298 73 - 5917169 TG--AGAGAAGAAGAAAAGGAGAGAGAGGG---AAGAGCTGAAGCTACTCTTGCAGCCGCAAGGC-AGAAGG-TGGGAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295518 75 - 10531588 GG--AGAGAAGAAGAAAAGGAGATAGAGGGAGAAAGAGCTGAAGCTGCTCTTGCAGCCA-AACGC-AGAGGG-TGGGAAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2952088 46 + 9850184 AG--------------------------------AGAGCTACAGCCACTCTTTCAGCCACGCTGC-AGAGGG-CAGGAGT i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80475949 43 + 88915250 ------------------------------------AGCTGTAGTCACATTTCCAGCTGTACTGCAAGAGGG-TGGGAGC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 932090 29 + 1009443 ------------------------------GGAAATA-------------------CCATACTGT-AGAGGG-TAGAAAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54944359 118 + 72247402 I e mm10.chr8 22479067 1773 - 129401213 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=348129.000000 s hg38.chr16_GL383557v1_alt 63020 32 + 89672 ATGAGGCA--A-AGAGAGCTTGTTAACTCCATG---CA- s panTro5.chr16 21494484 32 - 81586097 ATGAGGCA--A-AGAGAGCTTGTTAACTCCATG---CA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556417 32 - 90481686 ATGAGGCA--A-AGAGAGCTTGTTAACTCCATG---CA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788915 32 + 3010529 ATGAGGCA--A-AGAGAGCTTGTTAACTCCATG---CA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53901154 31 + 163208435 ATGAGGCA--A-AGAGAGCTTGTT-ACTCCAGG---CA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374944 31 - 74971481 ATGAGGCT--A-ACAGAGCTTGTT-ACTCCATG---CA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087544 31 - 78541002 ATGAGGCT--A-ACAGAGCTTGTT-ACTCCATG---CA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480285 31 + 26466322 ATGAGGCT--A-ACAGAGCTTGTT-ACTCCATG---CA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807846 31 + 43916225 ATGAGGCT--A-ACAGAGCTTGTT-ACTCCATG---CA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58238033 31 + 75399963 ATGAGGCT--A-ACAGAGCTTGTT-ACTCCATG---CA- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798430 31 - 7209941 ATGAGGCT--A-ACAGAGCTTGTT-ACTCCATG---CA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541521 31 + 3907144 ATGAGGCT--A-ACAGAGCTTGTT-ACCCCATG---CA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545947 31 - 44557958 ATGAGGCA--A-AGAGAGCTTGTT-ACTCCATG---CA- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6357227 31 + 6628207 ATGAGGCA--A-AGAGAGCTTGTT-ACTCCATG---CA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341371 31 - 5917169 ATGAGGCA--A-AGAGAGCTTGTT-ACTCCATG---CA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295593 31 - 10531588 ATGAGGCA--A-AGAGAGCTTGTT-ATTCCATG---CA- i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2952134 33 + 9850184 ATGAGGCAGGA-AGAGAGCTTGGT-GCTTCGTG---CT- i proCoq1.NW_012152729v1 C 0 I 1 s mm10.chr8 22480840 30 - 129401213 atgaagCA--AGAAAGGGTTTCAT-ACTCTACA------ i mm10.chr8 I 1773 C 0 s canFam3.chr5 80475992 32 + 88915250 ATGAAGCA--A---AGAGCATGGT-ACTCTCTAGTCCA- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 932119 33 + 1009443 GTGAGGCA--AAAGACAGCTTGGT-ACTCCAAG---CCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54944359 118 + 72247402 I e otoGar3.GL873566 13719793 1763 + 13852661 I a score=3409252.000000 s hg38.chr16_GL383557v1_alt 63052 218 + 89672 GCAAGATCAAAG---GGCCCTTCTGCGGCTTCTGGCCTGTCTCATCAGTATCACTTTGTCAGAATGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGGTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGGAGTTCTCCCC------AGG-CGAAACCTCAACACAAACCACCT-GTGCTGATGTCACTGACACCTCGAGG-- s panTro5.chr16 21494516 218 - 81586097 GCAAGATCAAAG---GGCCCTTCTGGGGCTTCTGGCCTGTCTCATCAGTATCACTCTGTCAGAAGGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGGTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CGAAACCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556449 218 - 90481686 GCAAGATCAAAG---GGCCCTTCTGGGGCTTCTGGCCTGTCTCATCAGTATCACTCTGTCAGAATGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACAAAGGGTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CGAAACCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 788947 218 + 3010529 GCAAGATCAAAG---GGCCCTTCTGGGGCTTCTGGCCTGTCTCATCAGTATCACTTTGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGGTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53901185 218 + 163208435 GCAAGATCAAAG---GGCCCTTCTGGGGCTTCTGGCCTGTCTCATCAGTAACACTTTGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCTAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CTAAACCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21374975 218 - 74971481 GCAAGATCAAAG---GGCCCTTCTGGGGCTTTTGGCCTGTCTCATCAGTAACACTTGGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACATCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGGGG-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087575 218 - 78541002 GCAAGATCAAAG---GGCCCTTCTGGGGCTTTTGGCCTGTCTCATCAGTAACACTTGGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACGTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480316 218 + 26466322 GCAAGATCAAAG---GGCCCTTCTGGGGCTTTTGGCCTGTCTCATCAGTAACACTTGGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACGTCAACACAAACCACCC-CTGATGATGTCACTGACACCTCGAGG-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20807877 218 + 43916225 GCAAGATCAAAG---GGCCCTTCTGGGGCTTTTGGCCTGTCTCATCAGTAACACTCGGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTGC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACGTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58238064 218 + 75399963 GCAAGATCAAAG---GGCCCTTCTGGGGCTTCTGGCCTGTCTCATCAGTAACACTTTGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACGTCAACACAAACCGCCC-CTGCTGATGTCACTGATACCTCGAGG-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798461 218 - 7209941 GCAAGATCAAAG---GGCCCTTCTGGGGCTTTTGGCCTGTCTCATCAGTAACACTTGGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACGTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541552 218 + 3907144 GCAAGATCAAAG---GGCCCTTCTGGGGCTTCTGGCCTGTCTTATCAGTAACACTTCGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACACAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-TAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21545978 218 - 44557958 GCAAGATCAAAG---GGCCCTACTGGGGCTTCTGGCCTGTCTCATCAGTAACACTTTGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACGCAGGCTGTGTGCTTTCTAGA----CTCTCC-CCTAACCAGATC--A-CAGACTGGACAAATGACTGAAGTTCTCCCC------AGG-CGAAATCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6357258 218 + 6628207 GCAAGATCAAAG---GGCCCTACTGGGGCTTCTGGCCTGTCTCATCAGTAACACTTTGTCAGAAAGGAACAAACTGGCAAGTGCAGGAGCTCAGCCCACGCAGGCTGTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CTGAACCTCAACATAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341402 218 - 5917169 GCAAGATCAAAG---GGCCCTACTGGGGCTTCTAGCCTGTCTCATCAGTAACACTTTGTCAGAAAGAAACAAACTGGCAAGTGCCGGAGCTCAGCCCACGCAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CGGAACCTCAACACAAACCACCC-CTGCTGATGTCACTGACACCTCGAGG-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295624 202 - 10531588 GCAAGATCAAAA---GGCCCTACTGGGGCTTCTGGCCTGTCTCATCAGTAACACT----------------AACTGGCAAGTGCAGGAGCTCAGCCCACGCAGGCTGTGTGCTTTCTAGA----CTCTCC-CCCAACCAGATC--A-CAGACTGGACAAGTGACTGAAGTTCTCCCC------AGG-CAAAACCTCAACACAAACCAACC-CTGCTGATGTCACTGACACCTCGAGG-- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54944477 217 + 72247402 GCAAGATCAAAG---GGCCCAGCTGGGGCTTCTGGACAGTCTCATCAGTCACACTTTGTCAGAGAGGAAAAAA-TGGCATGTGCAGGAGCTCAGCCCACGCAGGCTCTGTGCTTTCTAGA----CTCTCC-CCTAACCAGCTC--A-CAGACTGGCTAAGTGACTGAACTTCTCCCC------AGG-CGAAACCTCAACACAAACCACCC-CCGCTGATGTCACTGACACCTTGAGA-- i micMur3.chr20 I 118 I 2 s proCoq1.NW_012152729v1 2952168 217 + 9850184 GCAAGATCAAAG---GGCCCAGCTGGGGCTTCTGGACAGTCTCATCAGTCACACTTTGTCAGAAAGGAAAAAA-TGGCATGTGCAGGAGCTCAGCCCACGCAGGCTCTGTGCTTTCTAGA----CTCTCC-CCCCAGCAGCTC--G-CACACTGGCTAAGTGACTCAAGTTCTCCCC------AGG-CAAAACCTCAACACAAACCACCC-CCGCTGATGTCACTGACACCTTGAGA-- i proCoq1.NW_012152729v1 I 1 I 2 s mm10.chr8 22480870 217 - 129401213 GCAAGACTAAAGACAGGCAC-------GCTGTAGGCCAGGCTTGTCAGCAACACT--GTCA----GGAACAAACGGGCACGTGCAGGATCTCAGCCCACACAGTCCCTGTGCTTTCCACAGCCCCCCCCC-CCCAACCATATCTAA-TACACTGGCCAAGTGGCTAAGGTCCCCTCCCCCCCGAAG-GAAAAT---AACATAAACTACCCACTGATG-TGTCACTGACACTTCAAGA-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80476024 214 + 88915250 GCAAGACCAAAG---GGACCAGCCAGAGCTTCTGGCCAGTCTT----GTAACACTTTGTGAGA-TGGAACAAATTGGCACGTGCAGAAGCTTAGCGCACGCAGGCTC--TGCTTTCTAGA----CTCTTCTCCCAACCAGATC--ACCAGACAGGCAAAGTGATTAAAGTTCTCCCC------AGGCCAAAACCGAAATACAAACCACCC-CCACTGATGTCACTGACACTTTGAGA-- i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 932152 200 + 1009443 GCAAGATCAAAG-----------TGGGGCTTCTGGCCAGTCTTGTCAGTAGCACTTTGTTAGAAAAGAAGAAACTGGCATATGCAGGAACTCAGCCC------------CGCATTCTAGA----TTCTCC-TCCAACCAGAAT--G-CACACCGGCCAAGTGACTGAAGTTCTCCTT------GGG-CAAAGCCTAAACACAAACCATTT-CCACTGATATCACTGACACTGCAAGAGA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13719793 1763 + 13852661 I a score=12826198.000000 s hg38.chr16_GL383557v1_alt 63270 816 + 89672 TGGCCTCTGGCCAAAGAAATGAT--ATTTTGTCTCTGACTTCC-TGGGAAATAGCTATGCCTACTGTAAGGAAGCGATGAACTTAAAGCCAATGCTTTGGA-AAAAATG-------ATCTGGGCTCAATTACAAAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAGTGACACATCCCCGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAAACACACCAAAACACCGTGTGATGGTTGTAATCTAAGCCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCCCAGAAAAGCCATA--CAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCGTATCCC-ATGT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTGGGTTTT-T-CG-AAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCGTTTT-AGTAGCTTTAGCGAAGGGGC-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAACCAGGTTATTCAGATACCCC------AGAGTTCAAAGTTGAAAGCAAGTTAGCCAAATCAATGATACTTCCGGATGAGGGTCACCTTCCGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTTACTC------------GCAAAGTAGAC--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTATACAAAGGCC s panTro5.chr16 21494734 816 - 81586097 TGGCCTCTGGCCAAAGAAATGAT--ATTTTGTCTCTGACTTCC-TGGGAAATAGCTATGCCTACTGTAAGGAAGCGATGAACTTAAAGCCAATGCTTTGGA-AAAAATG-------ATCTGGGCTCAATTACAAAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCATGAGATG-A-TTCCAGTGACACATCCCCGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCACGTTCCTT-CCACCCCCACCTTCACAAACACACCAAAACACCGTGTGATGGTTGTAATCTAAGCCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCCCAGAAAAGCCATA--CAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCGTATCCC-ATGT-AAATCACAGCCGTGAA-----GAATTT-TCCTAGCTGGGTTTT-T-CG-AAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCGTTTT-AGTAGCTTTAGCAAAGGGGC-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAACCAGGTTATTCAGATACCCT------AGAGTTCAAAGTTGAAAGCAAGTTAGCCAAATCAATGATACTTCTGGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTTACTC------------GCAAAGTAGAC--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTATACAAAGGCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21556667 816 - 90481686 TGGCCTCTGGCCAAAGAAATGAT--ATTTTGTCTCTGACTTCC-TGGGAAATAGCTATGCCTACTGTAAGGAAGCGATGAACTTAAAGCCAATGCTTTGGA-AAAAATG-------ATCTGGGCTCAATTACAAAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCATGAGATG-A-TTCCAGTGACACATCCCCGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCACGTTCCTT-CCACCCCCACCTTCACAAACACACCAAAACACCGTGTGATGGTTGTAATCTAAGCCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCCCAGAAAAGCCATA--CAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCGTATCCC-ATGT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTGGGTTTT-T-CG-AAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAACGTTTT-AGTAGCTTTAGCGAAGGGGC-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAACCAGGTTATTCAGATACCCT------AGAGTTCAAAGTTGAAAGCAAGTTAGCCAAATCAATGATACTTCTGGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTTACTC------------GCAAAGTAGAC--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTATACAAAGGCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 789165 816 + 3010529 TGGCCTCTGGCCAAAGAAATGAT--ATTTTGTCTCTGACTTCC-TGGGAAATAGCTATGCCTACTATAAGGAAGCGATGAACTTAAAGCCAATGCTTTGGA-AAAAATG-------ATCTGGGCTCAATTACAAAGAGG----CAAGAGAGTGGGAGGAG-ACCTTCCTGTATCACTCATCTGGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAGTGACACATCCCCGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAAATACACCAAAACACCGTGTGATGGTTGTAATCTAAGCCCAAAGTGCAGGACAGGCACGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCCCAGAAAAGCCATA--TAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAA--AGAGGACGGAATCTAAAACTGAAGAAAATGCTCGTATCCC-ATGT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTGGGTTTT-T-CG-AAGATGTTAAG-ACCAATTCCTCAAGCCTGCAGACAGCGTTTT-AGTAGCTTTAGCCAAGGGGC-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAACCAGGTTATTCAGATACCCC------AGAGTTCAAAGTTGAAAGCAAGTTAGCCAAATCAATGATACTTCCGGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTTACTC------------GCAAAGTAGAC--------AAATGG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53901403 816 + 163208435 TGGCCTCTGGCCAAAGAAATGAT--ATTTTGTCTCTGACTTCC-TGGGAAATAGCTATGCCTACTATAAGGAAGCGATGAACTTAAAGCCAGTGCTTTGGA-AAAAATG-------ATCTGGGCTCAATTACAAAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAGTGACACATCCCCGTGCACACCTCCTATAGAGCCATCTGCTGCTTTCCCCCATGTTTCTT-CCACCCCCACCTTCACAAACACACCAAAACACCATGTGATGGTTGTAATTTAAGCCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCCCAGAAAAGCCATA--TAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAA--AAGGGACGGAATCTAGAACTGAAGAAAATGCTCGTATCTC-ATCT-AAATCACAGCCATGAA-----GAACTC-TCCTAGCAGGGTTTT-T-CG-AAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCTTTTC-AGTAGCTTCAGCCAAGGGGC-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAACCATGTTATTCAGATACCTC------AGAGTTCACAGTTGAAAGCAAGTTAGCCAAATCAATGATACTTCCTGATGAGGGTCACCTTCTGAATACCGGCCTAATCACTTTTCTATGTAAGATTTATGTG-----------------------------CTTACTC------------GCAAAGTAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21375193 814 - 74971481 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATGGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAATGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGACG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTACCCAGAAAAG--ATA--TAAATTCAGGGCG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-CG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCATTTC-AGTAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAATCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATCACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21087793 814 - 78541002 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATGGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAATGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTATGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTCCCCAGAAAAG--ATA--TAAATTCAGGGCG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-CG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCATTTC-AGTAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAATCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATCACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14480534 814 + 26466322 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATGGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAATGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCATGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTACCCAGAAAAG--ATA--TAAATTCAGGGCG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-CG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCATTTC-AGTAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAATCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATCACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20808095 810 + 43916225 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATAGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAATGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGAGG----CAAGAGAGTAGGAGGCG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCC----GTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTACCCAGAAAAG--ACA--TAAATTCAGGGTG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-CG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCATTTC-AGTAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAATCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATCACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58238282 814 + 75399963 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATAGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAATGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTACCCAGAAAAG--ATA--TAAATTCAGGGTG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-CG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCGTTTC-AGTAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAATCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATTACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTTATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACATAAAGGCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6798679 814 - 7209941 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAACAGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAATGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTTCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCTACGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTACCCAGAAAAG--ACA--TAAATTCAGGGTG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-CG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCATTTC-AGCAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTCCTTTAATGAAATCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATCACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTAATCACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 541770 814 + 3907144 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATAGCTATGCCTACTATAGGGAAGCGATGAACTTAAAACCAGTGCTTGGGA-AAAAATG-------ATCTGGGCTCAATTAC-AAGAGG----CAAGAGAGTGGGAGGGG-CCCTTCCTGTATCACTCATCTTGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCACAAGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCCGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCGTGTCATGGTTGTAATCTAAACCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTTCTAGGAAAC-AAAGCACCTACCCAAAAAAG--ATG--TAAATTCAGGGTG--------AATCAAAACAGCAGATGGCAA--AGAGGACAGAATCTAAAACTGAAGAAAATGCTCATATCCC-ATCT-AAATCACAGCCATGAA-----GAATTT-TCCTAGCTAGGTTTT-T-TG-GAGATGTTAAG-ACCAGTTCCTCAAGCCTGCAGACAGCATTTC-AGTAGCTTCAGCCAAGGGGT-AC-AGAGGTCAAAACCTCAGCCTG-TACCTGCTTTAATGAAACCATGTTATTCAGATATCCC------AGAGTTCAAAGTTGGAAGCAAGTTACCCAAATCACTGATTCTTCCTGATGAGGGTCACCTTCTGAATACTGGCCTAATTACTTTTCTGTGTAAGATTTATGTG-----------------------------CTCACTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21546196 820 - 44557958 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATAGTTATGCCCAGTATAAGGAAGCATTGAACTTAAAACCAATGCTTGGGAGAAAAATG-------ATCTGAGCTCAGTTACAAAGACA----CAAGAGAGTGGGAGGGGCCCCTTCCTGTATCACTCATCTTGCACAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCATGTGACGGTTGTAATCTAAGCCCAAAGTGCAGGACAGACATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACATGCCCAGAAAAGACATA--TAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAAAGAGAGGCTGGAATCTAAAACTGAAGAAAATGCTCCTATCCC-ATCT-ATGTCACAGCCATGAA-----GATTTT-TCCTAGCTGGGTTTT-T-TG-GAGATGTTAAG-ACCAGTTCTTCAAGCCTGCAGACAGTATTTC-AGCATCTTCAGCCAAGGGGC-AT-AGAGGTCAAAACCTCAGCCTGTTACCTCCTTTA--GAAACCATGTTATTCAGATACCCC------AGGGTTCAAAGTCCAAAGAGAATCAGCCAAATCAATGAAACTTCCTGATGAAGGTTACCTTCTGAATATTGACCTAATCACTTTTGTATGTAAGATGTACATG-----------------------------CTCATTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6357476 804 + 6628207 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGAGAAATACGTATGCCCAGTATAAGGAAGCGATGAACTTAAAACTAATGCTTGGGAAAAAAATG-------ATCTGAGCTCAGTTACAAAGACA----CAAGAGAGTGGGAGGGGCCCCTTCCTGTATCACTCATCTTGCACAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCATCTTCACAGACACACCAAAACACCATGTGATGGTTGTAATCTAAGCACAAAGTGCAGGACAGGCATGG-------C-------CACAG-------TGCTCCTAGGACAC-AAAGCACCTGCCCAGAAAAGACATA--TAAATTCAGGGTC--------AATCAAAAAAGCAGCTGGCAA--AGAGGCTGGAATCTAAAACTGAAGAAAATGCTCCTATCCC-ATCT-ATGTCACAGCCATGAA-----GATTTT-TCCTAGCTGGGTTTT-T-TG-GAGATGTTAAG-ACCAGTTCTTCAAGCCTGCAGACAGTATTTC-AGCATCTTCAG-CAAGGGGC-AT-AGAGGTCAAAACCTCAGCCTGTTACCTCCTTTA--GAAACCATGTTATTCAGTCAACCC------AGGGTTCAAAGTCCAAAGAGAGTAAGCCAAATCAATGAAACTTC-------------CCTTCTGAATACTGACCTAATCACTTTTGTATGTAAGATTTACGTG-----------------------------CTCATTG------------GCAAAGCAGAG--------AAACAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3341620 812 - 5917169 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGAGAAATAGCTATGCCCAGTATACGGAAGCAATGAACTTAAAACCAATGCTTGGGAAAAAAATG-------ATCTGAGCTCAGTTACAAAGACA----CAAGAGAGTGGGAGGGGCCCCTTCCTGTATCACTCATCTTGCACAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCATGAGATG-A-TTCCAATGACACATCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCTTTCCCTCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCATGTGATGGTTGTAATCTAAGCCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCCCAGGAAAGACATA--TAAATTCAGGGTG--------AATCAAAACAGCAGCTGGCAA--AGAGGCTGGAATCTAAAACTGAAGAAAATGCTCCTATCCC-ATCT-ACATCACAGCCATGAA-----GATTTT-TCCTAGCTGGGTTTT-T-TG-GAGATGTTAAG-ACCAGTTCTTCAAGCCTGCAGACAGTATTTC-AGTATCTTCAGCCAAGGGGC-AT-AGGGGTCAAAACCTCAGCATGTTACCTCCTTTA--GAAACCATGTTATTCAGACACCCC------AGGGTTCAAAGTCCAAAG------AGCCAAATCAATGAAACTTCCTGATGAAGGTCACCTTCTCAATACTGACCTAATCACTTTTGTATGTAAGATTTATGTG-----------------------------TTCATTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTATACAAAGGCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9295826 818 - 10531588 TGGCCTCTGGCCAAACAAATGAT--ATTTTGTCTCTGACTTCCTTGGGAAATAGCTATGCCCAGTATAAGGAAGCGATGAACTTAAAACCAATGCTTGGGAAAAAAATG-------ATCTGAGCTCAGTTACAAAGACA----CAAGAGAGTGGGAGGGGCCCCTTCCTGTATCACTCATCTTGCACAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGTCGCAGGGCCCACGAGATG-A-TTCCAATGACACATCCTTGTGCACACCTCCTTTAGAACCATCTGCTGCTTTCCCCCATGTTCCTT-CCACCCCCACCTTCACAGACACACCAAAACACCATGTGATGGTTGTAATCTAAGCCCAAAGTGCAGGACAGGCATGG-------C-------CACAA-------TGCTCCTAGGAAAC-AAAGCACCTGCACAGAAAAGACATA--TAAATTCAGAGTG--------AATCAAAACAGCAGCTGGCAA--AGAGGCTGGAATCTAAAACTGAAGAAAATGTTCCTATTCC-ATCT-ACGTCACAGCTATAAA-----GATTTT-TCCTAGCTGGGTTTT-T-TG-GAGATGTTAAG-ACCAGTTCTTCAAGCCTGCAGACAGTATTTC-AGCATCTTCAGCTAAGGGGC-AT-AGAGGTCAAAACCTCAGCCTGTTACATCCTTTA--GAAACCATGTTATTCAGACACCCC------AGGGTTCAAAGTCCAAAGAGAGTTAGCCAAATCAACGAAATTTCCTGATGAAGGTCACCTTCTGAATACTGACCTAATCACTTTTGTATGTAAGATTTATGTG-----------------------------CTCATTG------------GCAAAGCAGAG--------AAATAG---------TCAAATCAGC-----------------------------------------AA--------AAGCCAGTACACAAAGGCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54944696 815 + 72247402 TGGCCTCTGGCTAAACAAATGAT--ATTTCATCTCTGACTTCCTTGGGAAATTGCTCTGCCCAGTGTAAAGAAGTGATGGGCTTAAAACCAACGCTTGGGA--AAAACG-------ATCTGGGCTGAGTTACAAAGAGG----CAAGCGAGTGGGAGGGG-CCCTTCCTGTATTACTCGTCACGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGACGTAGGGCCCATGGGATG-A-TTCCAATGACACATCCCCATGCACACCT-CTTTGGAGCCATCTGCCGCTTTCCC-CATGTTCCTT-CCACCCCCACCTTCACAGATA---CACAATACGCTATGTTGGTCGTAATCTGGGCCCAAAGTGCACTCCAGGCGTGG-------C-------CACAA-------TGCTCTTAGGAAAG-AAAGTGCCTGCCCAGAAAAG--ACA--TAAATTCTCGGTG--------AATCCAAACAGCGGCTGGCAA--AGAGGCTGGGATCTAAAACCGAAGAAAACGCTCACATCCC-ATCT-AAATCCCAGCCATGAAGAATGGAATTT-TCCCAGCTGCACTTT-TGTC-AAGACATTAAG-ACCAACTCCTCACGCCCACAAATAGTCTTTC-AGTATATTCAGCCAAGAAGT-AC-GGTGGTCAAAACATTAGCCTG-TACCTCCTTTAATGAAGCCATGTTACTGAGGCATTCC------AGAGTTCCAAGACGAAAGCGAGTCAGGCAAATTAATGGTGCTCCCTGACAAGGGTCACCTTCTACATACAGAACGAATCACTTTCCTACATAAG-CTTATGTA-----------------------------CTCATCG------------GCAGAGTAGAG--------AAACAG---------TCAAATCAAC----------------------------------------AAA--------AAACCAGTACACAAAGACC i micMur3.chr20 I 2 C 0 s proCoq1.NW_012152729v1 2952387 816 + 9850184 TGGCCTCTGGCTAAACAAATGAT--ATTTCATCTCTGACTTCCTTGGGAAATAGCTCTGCCCAGTATAAAGACGTGATGGACTTAAAACCAACGCTTGGG---AAAACG-------ATCTGGGCTGAGTTACAAAGAGG----CAAGCGAGTGGGAGGGG-CCCTTCCTGTATCACTCGTCACGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGACGTAGGGCCCATGAGATG-A-TTCCAATGACACATCCCCATGCACACCT-CTTTGGAGCCATCTGCCGCTTTCCC-CATGTTCCTT-CCACCCCCACCTTCACAGATA---CACAATACGGTGTGTTGGTTGTAATCTAGGCCCAAAGTGCACTCCAGGCATGG-------C-------CACAA-------TGCTCTTAGGAAAG-AAAGTGCCTGACCAGGAAAG--ATA--TAAATTCTTGGTG--------AATCAGAACAGTGGCTGGCAA--AGAGGCTGGGATCTAAAGCCGAAGAAAACGCTCACATCCCAATCT-AAATCCCAGCCATGAAGAATAGAATTT-TCCTAGCTGCACTTT-TGTC-AAGACATTAAG-ACCAACTCCTTAAGCCGACAAATAGTGTTTC-AGTATATTCAGCCAAGAAGT-AC-GATGGTCAAAACATCAGCGTG-TACCTCCTTTAACGAAGCCATGTTATTGAGACATTCC------AGAATTCCAAGATGAAAGCAGCTCAGCCAAATCAACAGTGTTCTCTAACAAGGGTCACCTTCTAAAAACTGAACGAATCACTTTCCTGCTTAAG-CTTATGTA-----------------------------CTTATTA------------GCAAAGTAGAG--------AAATAG---------TCAAATCAACA---------------------------------------AAA--------AAAACAGTACACAAAGGCC i proCoq1.NW_012152729v1 I 2 C 0 s otoGar3.GL873566 13721556 825 + 13852661 TAGGCGCTGAGCCAACAAATGAT--ATTTCATCTCTGACTTCCTTGGGAAATAGGTCTGCCCAGTATAAGGAAGTGATCGACTTAAAACCAACCCTTGGGA-CAAAACA-------ATCTGGGCTGAGTTACAAAGAGG----CAAGCAAGAAGGAGGGG-CCCTTCCTGAATCACTCATCTCGCAGAAGGCACTTGTCAGCCAGCTCTGCTTCCCACACCCAGAGGAGCTAGGGCCCATGAGATG-A-TTCCAATGATACATCCCCATGCACACCT-CTTCAAAGCCATCTGCTGCTTTCCC-CATGCTCCCT-CCACCCCCACCTTCACAAATACACCACAACACAGTGTGCTGGTTATAATCTAGGCCCCAAGTGCACTCCAGGCACGG-------C-------CACAA-------TGCTCTAAGGAATGAAAAGCACCTCCCCAGAAAAG--ACATGTGAATTCT-GAGG--------AAGCCAAACAGTGGCTGGCAA--AGAGGCTGGAATCTAAAACTGAAGAAAGTGCTCACATCCC-ATCT-AAATCAAAGCCATAAAGAATGGAATTT-TCCTAGCTGTACTTT-TTTC-AAGGAATTAAG-----ATTCCTCAAGCCTACAAATAGTGTTTCAAGTATTTTCAGCCAAGGGAC-AC-AGTGGTCAAAACATCAGCCTG-TATCTGCTTTCATCAAGCCATGTTATC-AAACATTTC------AGAGTTCAATGATGAAAATGAGTTAGCCGAATCAACAATATTCCCTGA-AAGGGTCACCTTCTGAATACTGAACAAATCACTTTCCTACTTAAG-TTTGTGTA-----------------------------CTCATTa------------gcaaaacagag--------aaacag---------tcaaatcagaa---------------------------------------aaaaacaaaacaaaacgatacaaaaAGGTC i otoGar3.GL873566 I 1763 C 0 s mm10.chr8 22481087 895 - 129401213 -----GACGGCCAAATAAATGATTCACTTCATCTCTGACTTCC-TGGGAACTAGCTCTACTTAGGACAAGGACATGAAGGACCTATCACCATGACCAGGGT-GAAAGCC-------TTCTGGGCTGAGTTACAGAGAGAAGGCTGAGTGAGTGGGAGGGG-CTTTTCCTGCTCCACTC-TCTCACAGGAGGCACTTGCCAGCTAGCTCTGCTTCCCACATCCC-AGGACACAAGGCCCAAGAGATGAA-ATTCAGTGACACTTCCCTGTGCACACCTCCTTTAGAGCCATCTGCTGCCTTACC-CACGCAAGTC-CCACCCCCACCTTCACAGAC-CGGCAGAACAGCTGGTGTTGGGTATAACTGAAACCCAAAGTGCAGTACAGCCATGGCTGTGGTC-------CACAG-------GCCTCCGAGGAAGA-AAAGCTCCTACCCAGAAAAGACAGG--TATACTCAGGGGGAAAAAAGAAATCAAAACAGCAGCTAGCAT--------------CTCAAACTAAAGGAAGCACTTGTATCCT-ACCC-AAATTGTGGTCACAGA-----CACTGGATCCCAGCTGGGCTTT-T-CACAAGACACAAAG-ACCAACTTTTGAAATGTG----------TTC-AGT----------AAGGAGC-AC-GGTGGTCAAAACATCAGCAGG-CGTCTCCATGAATGAAATTGCTTCACTCAGTCATTCA------AGAGTG-AAAGTTAAAAGTGGGTC-GTCAGCTCAAACGTATTCCCTCCCGAGGGTCACCCTCTGAATGCCAACCCAATCATTTTTCTACTTAGGA-TTATGTGTTGAAAAACTAGTCCAGAAAGGCTAACCCCTTACCCAACAGTAGGAATGCAAATCAGGGAGTGTGCCAAACAGAACCTGTCCTCCAATCAACACGCTGGCAGTTTGTACCCATCCTCCACTGACCACGGAGGTAG--------AAGTTTGTATCCTGAGGCT i mm10.chr8 C 0 I 420 s canFam3.chr5 80476240 832 + 88915250 TGGCCTCTGGCCAAACAAGTGAT--ATTTCATCTCTGACTTCCTTGGGAAATAGCTCTGCCCAGCATGAGGAACTGATGGACTTATCACCCATGCTTGACA-AAAAATATGGACCTGCCTGGGCTGAGTTACAATGAGG----AAAGTGAGTGGGAGGGG-CCCTTCCTGTATCACTCATTCTGCAGAAGGCACTTGTCAGCCAGCTTCGTTTCCCACGCCCAGAGGACAGAGGGTCTGGGAGATGTG-TTGCAGTGACACATC---ATGCACACCTCCTTTAAGGCCATCTGCTACTTTCCTCTCAGTTCCTTCCCACCCCCACCTGCACAGATATACCAAAATACAGTGTGTTGGTTGTAATCTAAGCCCAGGGTACATTATAGGCAAGG-------C-------CACAGCTATTACTGCTCCTAGGAAAC-AAAGTAGCGGTCCAGAGAAGGCATG--TAAATT-GGGGTG--------AATCAAAACAGCAGCTAGC----AGAGGCTGGAATCTGGAAATGAAAAAAATGTTCACAACCC-CTCTAAAATCACAGCCATGAAGAATGAAATTT-TCCTGGCTGGACTTT-TTTC-AAGACATTACG-ACCAATTCTTCAAGCTTATAGATACTATTCC-AGCATTTTCAGGCAAGGGGCAAA-AGTGGTCAAAACCTCAGCCTG-TGTCTCCTTTAATAAAATTGTGTTATTTAGCCACCCC------AGGGTGCAGAGATAGAAGTAATTCAGCCAAATCAACAGT-CTTCCCCATGAGAGTTACCTTCTGAATACTCATCTAATCACTTTCGTACTTAGG-TTTATATG-----------------------------TTTACAG------------GAAAAGCAGAG---------AATGC---------TTAAGTCAGC-----------------------------------------AA--------AAAACAGTACACAAATGCC i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 932352 825 + 1009443 TGGCCTCTTGCCAAGCAAATGAT--ATTTCATCTCTTACTTCCTTGGAAAATAACTCTGCCCAGCATGAGGAAGTGATGGACTTATCACCAATGCTTGGAA--AAAACT-------ATCTGGGCTGAGTTACAAAGAGG----TGAGCAAGGGGGAGGGG-CTCTTCCTGTATCAGTCATCCCACAGAAAGCACTTGTCAGCCAGCTCTGCTTCCCACATCCAGAAGATACAAGGTCCACAAGATG-AGTTCTAGCAACACATCACCATGCACTCCTCCTCTAGAGCTATCTCCTGCTCTC---CATGTTCCAT-CCAGCCCCATCTC--CAGTTATAACAAAATACAGCATGTTGGTTGTGATCTAAGC-CAAAGCACATTACAGGCATGG-------CCACAGCTCACAA-------TGCTCCTAGGAAAC-AAAGTGCCTGCCCAGAAAAGAGAAG--TAAATTTGGGGTG--------AATTAAAGCAGCAGCTGGCAA--AGAGGCTGGAATCTAACACTGAAAAAAATACTCACATCCC-ACCT-AAATCACAGCAATGAAGAATGGAATTT-TCCTAGCTGGACTGCAT-TT-AAGACATTAAGTCCCAACTCTTCAAACCTGCAGATAGCGTTTC-AGTATATTCAACCAAGGGAC-ACAAGTGGGCAAAACCTCAGCC-A-TTTATCCCTTAGTGAAACCCGGTTATTCAGTTACCCTGGGGCAGGGGTTCAAAATT----GTGATTTAGCCAAATAAACAGCATTCCCCAG-AAAGGTCACCTTCTGAATACTGACCTATTTGCTTTCCCAGTTCTG-TTTCTTTG-----------------------------CTCATAA------------GCAAAGTAAAG--------AAATAG---------TCAAGTCAGC-----------------------------------------AA--------AACCCAGTAAACAAATGCC i dasNov3.JH569970 C 0 C 0 a score=2234008.000000 s hg38.chr16_GL383557v1_alt 64086 188 + 89672 AGCCCCTTCCCCGAGAGCCTCCCGAAGAACTGTGGGAACACAAACCAGGGAATCTGT-AAAAC--AAAAGCCCCTCTCCTCCAAGAAATGTACTAGCTACCTGTATTCTGATTTACTAGCTACCTTTATTCTGAGTCTCTGTCCTCTTACCTTATTGTACTTGTTGCTTTTAGAACTTT--------------AAGATTCAGAAG- s panTro5.chr16 21495550 188 - 81586097 AGCCCCTTCCCTGAGAGCCTCCCAAAGAACTGTGGGAACACAAACCAGGGAATCTGT-AAAAC--AAAAGCCCCTCTCCTCCAAGAAATGTACTAGCTACCTTTATTCTGATTTACTAGCTACCTTTATTCTGAGTCTCTGTCCTCTTACCTTATTGTACTTGTTGCTTTTAGAACTTT--------------AAGATTCAGAAG- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557483 188 - 90481686 AGCCCCTTCCCCGAGAGCCTCCCAAAGAACTGTGGGAACACAAACCAGGGAATCTGT-AAAAC--AAAAGCCCCTCTCCTCCAAGAAATGTACTAGCTACCTTTATTCTGATTTACTAGCTACCTATATTCTGAGTCTCTGTACTCTTACCTTATTGTACTTGTTGCTTTTAGAACTTT--------------AAGATTCAGAAG- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 789981 187 + 3010529 AGCCCCTTCCCTGAGAGCCTCCCGAAGAACTGTGGGAACACAAACCAGGGAATCTGT-AAAAC--AAAAG-CCCTCTCCTCCAAGAAATGTACTAGCTACCTTTATTCTGATTTACTAGCTACCTTTATTCTGAGTCTCCGTCCTCTTACCTTATTGTACTTGTTGCTTTTAGAACTTT--------------AAGATTCAGAAG- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902219 188 + 163208435 AGCCCCTTCCCTGAGAGCCTCCCGAAGAACTGTGGAAACACAAACCAGGGAATCTGT-AAAAC--AAAAGCCCCTCTCCTCCAAGAAACGTACTAGCTACCTTTATTCTGATTTACTAGCTACCTTTATTCTCAGTCTCCGTCCTCTTACCTTATTGTACTTGTTGCTTTTAGAACTTT--------------AAGGTTCAGAAG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376007 182 - 74971481 AGCCCCTTCCCTGAGAACCTCCCGAAGAACTGTGGGAACACAAACCAGGGA-------AAAAC--AAAGGCCTCTCTCCTCCAAGAAATGTACTAGCTACCTCTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCTTCCTCTTATCTTATTGTACTTGTTGCTTTTAGAACTTG--------------AAGATTCAGAAG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21088607 182 - 78541002 AGCCCCTTCCCTGAGAACCTCCCGAAGAACCGTGGGAACACAAACCAGGGA-------AAAAC--AAAGGCCTCTCTCCTCCAAGAAATGTACTAGCTACCTCTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCTTCCTCTTATCTTATTGTACTTGTTGCTTTTAGAACTTG--------------AAGATTCAGAAG- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481348 182 + 26466322 AGCCCCTTCCCTGAGAACCTCCCGAAGAACTGTGGGAACACAAACCAGGGA-------AAAAC--AAAGGCCTCTCTCCTCCAAGAAATGTACTAGCTACCTCTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCTTCCTCTTATCTTATTGTACTTGTTGCTTTTAGAACTTG--------------AAGATTCAGAAG- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20808905 182 + 43916225 AGCCCCTTCCCTGAGAACCTCCCGAAGAACTGTGGGAACACAAACCAGGGA-------AAAAC--AAAGGCCTCTCTCCGCTAAGAAATGTACTAGCTACCTCTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCTCCCTCTTATCTTATTGTACTTGTTGCTTTTAGAACTTG--------------AAGATTCAGAAG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239096 182 + 75399963 AGCCCCTTCCCTGAGAACCTCCCGAAGAACTGTGGGAACACAAACGAGGGA-------AAAAC--AAAGGCCTCTCTTCTCTAAGAAATGTACTAGCTACCTTTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCTTCCTCTTATCTTATTGTACTTGTTGCTTTTAGAACTTG--------------AAGATTCAGAGG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799493 182 - 7209941 AGCCCCTTCCCTGAGAACCTCCCGAAGAACTGTGGGAACACAAACCAGGGA-------AAAAC--AAAGGCCTCTCTCCTCTAAGAAATGTACTAGCTACCTCTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCTTCCTCTTATCTTATTGTACTTGTTGCTTTTAGAACTTG--------------AAGATTCAGAAG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 542584 179 + 3907144 AGCCCCTTCCCTGAGAACCTCCCAAAGAACTGTGGGAACACAAACCAGGGA-------AAAACAAAAAAGCCTCTCTCCTCCAAGAAATGTACTAGCTACCTTTATTCTGATTTACTAGCTACTTTTATTCTGATTCTCCT-----TTGTCTTATTGTACTTGCTGCTTTTAGAACTTC--------------AAGATTCAGAAG- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547016 187 - 44557958 AGCCCCTTCCCTGAGATCCTCCTGAAGAACTGTGGGAACACAAATCAGGGAGTCTGT-AAAAC--AAAACCCCCTCTTCTCCAAGGAATGTACTAGCTACCTTTATTCTGATTTACTAGCTACCTTTATTCTGATTGTCCTTCCTC-TATTTTATTGTACTTGTTGCTTTTAGAACGTG--------------AAGTTTCAGAAG- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358280 186 + 6628207 AGCCCCTTCCCTGAGATCCTCCCGAAGAACTGTGGGAACACAAATCAGGGAATCTGT-AAAAC--AAAACCCCCTCTCCTCCAAGGAATGTACTAGCTACTTTTATTCTGATTTACTAGCTACCTTTATTCTGATTCTCCTTCCTC-TATTTTATTGTACTTGTTG-TTTTAGAACGCG--------------AAGTTTCAGAAG- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3342432 164 - 5917169 AGCCCCATCCCTGAGATCCTCCCGAAGAACTGTGGGAACACAAATCAGGTAGTCTGT-AAAAC--AAAACCCCCTCTCCTCCAAGGAATG-----------------------TACTAGCTACCGTTATTCCGATTCTCCTTCCTC-TATTTTACTGTACTTGTTGCTTTTAGAATGTG--------------AAGTTTCAGAAG- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9296644 187 - 10531588 AGCCCCTTCCCTGAGATCCTCCCGAAGAACTGTGGGAACACAAATCAGGGAGTCTGT-AAAAC--AAAACCCCCTCTCCTCCAAGGAACGTACTAGCTACCTTTATTCTGAGTTACTAGCTACCTTTATTCTGATTCTCCTTCCTC-TATTTTATTGTACTTGTTGCTTTTAGAACGTG--------------AGGTTTCAGAAG- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54945511 159 + 72247402 AGCCCTTTCCCTGAGAGCCTCTTGAG----CTTGGGAACACAAGTGAGGAAATCTAT-AAAAC--AAAAGCTCCTCTACTCCAAAGAGTATACTAGGAA------------------------CTTTATTCTGATTCTCCTCCCTC-GATCTCATTGTACTTGTTGCTTTGAGAACTTA--------------AAGGTTCCAAAG- i micMur3.chr20 C 0 I 15 s proCoq1.NW_012152729v1 2953203 160 + 9850184 AGCCTCTTCCCTGACATCCTCTTGAG----CTTGGGAACGCAAATGAGGAAATCTGT-AAAAC--AAATGCTCCTCTACTCCAAAGAGCACACTAGGAA-----------------------CCTTTACTCTGATTCTCCTTCCTC-AATCTCATTGTACGTGTTGCTTTTAGAACTTA--------------AAGATTCCAAAG- i proCoq1.NW_012152729v1 C 0 I 5 s otoGar3.GL873566 13722381 160 + 13852661 AGTCCCTTCCCTGAGATCCTCTTGAT----CTTGGGAACACGAATAAGGAAATCTGTAAAAAC--AAAAGTTCCTTTACTCCAAAGAGTATCCTAGAAC-----------------------TCTTTATTCTGATTTTCCTTCCAC-AATCTCATTGTACTTCTAGCTTTTAGAATTT---------------AAGATTCCAAGG- i otoGar3.GL873566 C 0 I 5 s canFam3.chr5 80477072 144 + 88915250 TGCCCCTACCCTGGGAGCCTCATGGGG---CCTGGGAGTGAAAATGAGGAAATCTGC-AAAAC--AAAAGTTCCTCT-CTCCAAAGAATAGGTCAGGAA-----------------------ATTTTATTCTGATTCTCCTTTCTC-----------------TTGGTTTTAGAACTTG--------------AAAATTCCTAAG- i canFam3.chr5 C 0 I 5 s dasNov3.JH569970 933177 161 + 1009443 TACTCCTTCCTT-------TCATAAG----CGTGGGAACCTAAATGAGGAAACCTGTAAAAAA--AAAAGTTCCTCTCCTCCAGAGAATACAC-------------------------------TTTATTCTGGTTCTCCTTCCTC-TATCTTATTGTACTTGTTGGTTTTAGAATTTGATTTCTAATTAAACAAGATTCAGTGAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22481982 420 - 129401213 I a score=105444.000000 s hg38.chr16_GL383557v1_alt 64274 9 + 89672 AAGATTTGG s panTro5.chr16 21495738 9 - 81586097 AAGATTTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557671 9 - 90481686 AAGATTTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790168 9 + 3010529 AAGATTTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902407 9 + 163208435 AATATTTCG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376189 9 - 74971481 AAGATTTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21088789 9 - 78541002 AAGATTTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481530 9 + 26466322 AAGATTTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809087 9 + 43916225 AAGATTTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239278 9 + 75399963 AAGATTTGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799675 9 - 7209941 AAGATTTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 542763 9 + 3907144 AAGATCTGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547203 9 - 44557958 AAGATTTGG i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6358466 9 + 6628207 AAGACTTGG i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3342596 9 - 5917169 AAGATTTGG i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9296831 9 - 10531588 AAGATTTGG i aotNan1.NW_018500622v1 C 0 I 1 s proCoq1.NW_012152729v1 2953368 9 + 9850184 AAGATTCAG i proCoq1.NW_012152729v1 I 5 I 1 s otoGar3.GL873566 13722546 9 + 13852661 AAGATTCAG i otoGar3.GL873566 I 5 I 1 s canFam3.chr5 80477221 9 + 88915250 AAAAGTCAG i canFam3.chr5 I 5 I 11 s dasNov3.JH569970 933338 7 + 1009443 AGGACAG-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54945670 15 + 72247402 I e mm10.chr8 22481982 420 - 129401213 I a score=262153.000000 s hg38.chr16_GL383557v1_alt 64283 16 + 89672 GAGGTAGCAGTGAAGA s panTro5.chr16 21495747 16 - 81586097 GAGGTAGCAGTGAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557680 16 - 90481686 GAGGTAGCAGTGAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790177 16 + 3010529 GAGGTAGCAGTGAAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902416 16 + 163208435 GAGGTAGCAGTGAAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376198 16 - 74971481 GAGGTAGCAGTGAAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21088798 16 - 78541002 GAGGTAGCAGTGAAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481539 16 + 26466322 GAGGTAGCAGTGAAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809096 16 + 43916225 GAGGTAGTAGTGAAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239287 16 + 75399963 GAGGTAGCAGTGAAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799684 16 - 7209941 GAGGTAGCAGTGAAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 542772 16 + 3907144 GAGGTAGCAGTGAAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547213 16 - 44557958 GAGGTAGCAGTGAAGA i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6358476 16 + 6628207 GAGGCAGCAGGGAAGA i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3342606 16 - 5917169 GAGGTAGCAGGGAAGA i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9296841 16 - 10531588 GAGGTAGCAGTGAAGA i aotNan1.NW_018500622v1 I 1 C 0 s micMur3.chr20 54945685 16 + 72247402 GAGGTAGCAGGGAAGA i micMur3.chr20 I 15 C 0 s proCoq1.NW_012152729v1 2953378 16 + 9850184 GAGATAGTAGGGAAGA i proCoq1.NW_012152729v1 I 1 C 0 s otoGar3.GL873566 13722556 16 + 13852661 GAGGTAGAAATGAAGC i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80477241 16 + 88915250 GTGGTAGCAGTGAGGA i canFam3.chr5 I 11 C 0 s dasNov3.JH569970 933345 16 + 1009443 GAGATGGTGAAAAAGA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22481982 420 - 129401213 I a score=3958593.000000 s hg38.chr16_GL383557v1_alt 64299 195 + 89672 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG s panTro5.chr16 21495763 195 - 81586097 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557696 195 - 90481686 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790193 195 + 3010529 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATATCTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902432 195 + 163208435 ACTCACCAATGACTTGTCAATAATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376214 195 - 74971481 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21088814 195 - 78541002 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481555 195 + 26466322 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809112 195 + 43916225 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239303 195 + 75399963 ACTCACCAATGACTTGTCAATGATACAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAACCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799700 195 - 7209941 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATACTGTTTGTCTGGGATGCTGTACTCAAATACCTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 542788 195 + 3907144 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTGGGATGAAAACTGATGTGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCCTGCTTCTGGACAGTCCGGCTCCAATCTGTATATTGTTTGTCTGGGATGCTGTACTCAAATACCTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547229 195 - 44557958 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGAATGTGCATCGGTCTCTTTGGATGAAAACTGATATGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCGTGCTTCTGGACAGTCCGGCTCCAGTCTGTATAGTGTTTGTCTGGGATGCTGTACTCAAATACCTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358492 195 + 6628207 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTTGGATGAAAACTGATATGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCGTGCTTCTGGACAGTCCGGCTCCAGTCTGTATAGTGTTTGTCTGGGATGCTGTACTCAAATACCTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3342622 195 - 5917169 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATCGGTCTCTTCGGATGAAAACTGATATGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCGTGCTTCTGGACAGTCCGGCTCCAATCTGTATAGTGTTTGTCTGGGATGCTGTACTCAAATACCTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9296857 195 - 10531588 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATATGCATCGGTCTCTTCGGATGAAAACTGATATGTGTGATAGGAGTATCCCTTTGGAGCCAAAGGTGGTGAAAGCCATGCTTCTGGACAGTTCGGCTCCAGTCTGTATAGTGTTTGTCTGGGATGCTGTACTCAAATACCTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54945701 195 + 72247402 ACTCACCAAGGACTTGTCAATGATGCAGAACATGTAGGCGTCATGGAGGAGGATGTGCATTGGTCTCTTGGGATGAAAACTGATGTGTGTGATGGGAGTGTCCCTTTGGAGCCAAAGGTGGTGGAACCCCTGCTTCTGGACAGCCCGGCTCCACTCTGTATACTGCTTGTCTGGGATGCTATACTCGAATACCTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2953394 195 + 9850184 ACTCACCAAGGACTTGTCAATGATGCAGAACATGTAGGCGTCGTGGAGGAGGATGTGCATTGGTCTCTTGGGATGAAAACTGATGTGTGTGATGGGCGTGTCCCTTTGCAGCCAAAGGTAGTGGAACCCCTGCTTCTGGACAGCCCGGCTCCACTCTGTATACTGCTTGTCTGGGATGCTATACTCAAATACCTG i proCoq1.NW_012152729v1 C 0 I 798 s otoGar3.GL873566 13722572 195 + 13852661 ACTCACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCGTGGAGAAGGATGTGCATTGGTCTCTTGGGATGAAAACTGATGTGTGTGATGGGCGTATCCCTTTGGAGCCAAACCTGGTGAAACCCCTGCTTCTGGATAGTCCGGCTCCACTCTGTATACTGTTTGTCTGGGATGCTATACTCAAATACCTG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22482402 194 - 129401213 ACTTACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGGAGGATGTGCATTGGTCTCTTGGGATGAAAGCTGATGTGTGTGATGGGAGTATCCCTTTGGAGCCACAGCTGGTGAAATCCTTGCTTCTGGAGAGAGCGGCTCCACTCTGTATACTGCTTTTCTGGGATGCTGAATTCAAATACCT- i mm10.chr8 I 420 C 0 s canFam3.chr5 80477257 195 + 88915250 ACTTACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATTGGTCTCTTGGGATGAAAACTGATATGTGTGATGGGAGTGTCCCTTTGGAGCCAAAGGTAATGAAACCCCTGCTTCTGGATGGTCCGGCTCCACTCTGTATACTGTTTGTCTGGGATACTGTACTCAAATACCTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933361 195 + 1009443 ACTTACCAATGACTTGTCAATGATGCAGAACATGTAGGCATCATGGAGAAGGATGTGCATTGGTCTTTTGGGATGAAAACTGATGTGTGTGATGGGAGTATCCCGTTGGAGCCAAAGGTGGTGAAACCCCTGCTTCTGAATGGTCCGGCTCCACTCTGTATACTGTTTGTCTGGGATGCTATACTCAAACACCTG i dasNov3.JH569970 C 0 C 0 a score=606586.000000 s hg38.chr16_GL383557v1_alt 64494 45 + 89672 AGGGAGGACATGACA-TA-G-AGAAATGCAGGCTGGTACTCAGAAAGA s panTro5.chr16 21495958 45 - 81586097 AGGGAGGACATGACA-TA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557891 45 - 90481686 AGGGAGGACATGACA-TA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790388 45 + 3010529 AGGGAGGACATGACA-TA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902627 41 + 163208435 AGGAAGGACATGACA-CA-G-AGAAATGCAGGCTGGTACTC----AGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376409 45 - 74971481 AGGAAGGACGTGACA-CA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089009 45 - 78541002 AGGAAGGACGTGACA-CA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481750 45 + 26466322 AGGAAGGACATGACA-CA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809307 45 + 43916225 AGGAAGGACATGACA-CA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239498 45 + 75399963 AGGAAGGACATGACA-CA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799895 45 - 7209941 AGGAAGGACATGACA-CA-G-AGAAATGCAGGCTGGTACTCAGAAAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 542983 45 + 3907144 AGGAAGGACATGACA-CA-G-AGAAATTCAGGCTGGTACTCAGAAAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547424 45 - 44557958 AGAAAGGACATGACA-CA-G-AGGAATGCAGGCTGGTACCCAGGAAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358687 45 + 6628207 AGGAAGGACATGACA-CA-G-AGGAATGCAGGCTGGTACCCAGGAAGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3342817 45 - 5917169 AGGAAGGACATGACA-CA-G-AGGAATGCAGGCTGGTACCCAGGAAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297052 45 - 10531588 AGGAAGGACATGACA-CA-G-AGGAATGCAGGCTGGTACTCAGGAAGA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54945896 46 + 72247402 GGAAAGGACATGACG-CA-GTAAAAGTGCAGGCTGGTACCCAGAAAGA i micMur3.chr20 C 0 I 1084 s otoGar3.GL873566 13722767 46 + 13852661 AGAAACGATATGACA-CC-GTGGAAATGCATGGTGGTACCCAGAAAGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22482596 44 - 129401213 --GGAGAACACACCACCA-A-ACAAGTGCAAATGTGCACTCATGATGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80477452 46 + 88915250 AAGAAGGATAGGATA-CACA-AGAAATGCAGGCTGACACCCAGAAAAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933556 24 + 1009443 GGAAAGAATATGATA-CA-G-AGGAAT--------------------- i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2953589 798 + 9850184 I a score=176749.000000 s hg38.chr16_GL383557v1_alt 64539 17 + 89672 CCAGAAGGGCATTCTCA--- s panTro5.chr16 21496003 17 - 81586097 CCAGAAGGGCATTCTCA--- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557936 17 - 90481686 CCAGAAGGGCATTCTCA--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790433 17 + 3010529 CCAGAAGGGCATTCTCA--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902668 17 + 163208435 CGAGAAGGGCATTCTCA--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376454 17 - 74971481 CCAGAAGGGCATTCTCA--- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089054 17 - 78541002 CCAGAAGGGCATTCTCA--- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481795 17 + 26466322 CCAGAAGGGCATTCTCA--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809352 17 + 43916225 CCAGAAGGGCATTCTCA--- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239543 17 + 75399963 CCAGAAGGGCATTCTCA--- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799940 17 - 7209941 CCAGAAGGGCATTCTCA--- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543028 17 + 3907144 CCAGAAGGGCATTCTCA--- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547469 17 - 44557958 CCAGAAGGGAATTCTCC--- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358732 17 + 6628207 CCAGAAGAGCATTCTCC--- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3342862 17 - 5917169 CCAGAAGGGCATTCTCC--- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297097 17 - 10531588 CCAGAAGGCCATTCTCC--- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13722813 17 + 13852661 ACAGAAGAGTAggctca--- i otoGar3.GL873566 C 0 I 1294 s mm10.chr8 22482640 11 - 129401213 TCAGAGG------CTCT--- i mm10.chr8 C 0 I 2 s canFam3.chr5 80477498 17 + 88915250 CTAGAAGGTATCCCTGA--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933580 9 + 1009443 -----------ATCTCCCTG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I a score=61341.000000 s hg38.chr16_GL383557v1_alt 64556 5 + 89672 TCCCT- s panTro5.chr16 21496020 5 - 81586097 TCCCT- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557953 5 - 90481686 TCCCT- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790450 5 + 3010529 TTCCT- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902685 5 + 163208435 TTCCT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376471 5 - 74971481 TTCCT- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089071 5 - 78541002 TTCCT- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481812 5 + 26466322 TTCCT- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809369 5 + 43916225 TTCCT- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239560 5 + 75399963 TTCCT- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799957 5 - 7209941 TTCCT- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543045 5 + 3907144 TTCCT- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547486 5 - 44557958 TTCCT- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358749 5 + 6628207 TTCCT- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3342879 5 - 5917169 TTCCT- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297114 5 - 10531588 TTCTT- i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22482653 5 - 129401213 TCCCT- i mm10.chr8 I 2 I 326 s canFam3.chr5 80477515 5 + 88915250 TTCCT- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933589 5 + 1009443 -TCCTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=294353.000000 s hg38.chr16_GL383557v1_alt 64561 33 + 89672 AACCAGAAAGTATCTATACAAAGCTT--CAA------------CTGT s panTro5.chr16 21496025 33 - 81586097 AACCAAAAAGTATCTATACAAAGCTT--CAA------------CTGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557958 33 - 90481686 AACCAGAAAGTATGTATACAAAGCTT--CAA------------CTGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790455 33 + 3010529 AACCAGAAAGTATCTATACAAAGCTT--CAA------------CTGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902690 33 + 163208435 AACCAGAAAGTATCTATACAAACTTT--CAA------------CTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376476 29 - 74971481 AACCAGAAAGTATCTACACAAACCTT--CAG---------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089076 29 - 78541002 AACCAGAAAGTATCTACACAAACCTT--CAG---------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481817 29 + 26466322 AACCAGAAAGTATCTACACAAACCTT--CAG---------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809374 33 + 43916225 AACCAGAAAGTATCTACACAAACCTT--CAGCTCC------------ i cerAty1.NW_011999143v1 C 0 I 19 s chlSab2.chr5 58239565 33 + 75399963 AACCAGAAAGTATCTATACAAACCTT--CAG----CTGT-------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799962 29 - 7209941 AACCAGAAAGTATCTACACAAACCTT--CAG---------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543050 33 + 3907144 AACCAGAAAGTATCTACACAAACCTT--CTG--------CTGT---- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547491 33 - 44557958 AACCAGAAAGTATCTATACAAACCTT--CAA------------CTGT i calJac3.chr20 C 0 I 4 s saiBol1.JH378225 6358754 33 + 6628207 AACCCGAAAGTATCTATACAAACCTT--CAA------------CTGT i saiBol1.JH378225 C 0 I 4 s cebCap1.NW_016107433v1 3342884 33 - 5917169 AACCAGAAAGTATCTATACAAACCTT--CAA------------CTGT i cebCap1.NW_016107433v1 C 0 I 4 s aotNan1.NW_018500622v1 9297119 33 - 10531588 AACCAGAAAGTATCTATACAAACCTT--CAA------------CTGT i aotNan1.NW_018500622v1 C 0 I 4 s canFam3.chr5 80477520 32 + 88915250 AACCAGAAAGTATCTATACAAACCCT---AA------------CTGC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933594 32 + 1009443 AACCAGAAAATATCTATACAAACCTTGACAG------------C--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=84272.000000 s hg38.chr16_GL383557v1_alt 64594 25 + 89672 ATTATATTCATTC-TATGC-------------TCTCCCA s panTro5.chr16 21496058 25 - 81586097 ATTATATTCATTC-TATGC-------------TCTCCCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21557991 25 - 90481686 ATTATATTCATTC-TATGC-------------TCTCCCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790488 25 + 3010529 ATTATATTCATTC-TATGC-------------TCTCCCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902723 25 + 163208435 ATTATATTTATTC-TATGC-------------TCTCCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376505 6 - 74971481 ---------------------------------CTCCCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089105 6 - 78541002 ---------------------------------CTCCCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481846 6 + 26466322 ---------------------------------CTCCCA i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58239598 25 + 75399963 ATTATATTCATTC-TATGC-------------TCTCCCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6799991 6 - 7209941 ---------------------------------CTCCCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543083 25 + 3907144 ATTATATTCATTC-TATGT-------------TCTTCCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547528 25 - 44557958 AGTTTATTCAGTC-TATGC-------------TCTCCCA i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6358791 25 + 6628207 AGTTTATTCAGTC-TATGC-------------TCTCCCA i saiBol1.JH378225 I 4 C 0 s cebCap1.NW_016107433v1 3342921 25 - 5917169 AGTTTATTCAGTC-TATGC-------------TCTCCCA i cebCap1.NW_016107433v1 I 4 C 0 s aotNan1.NW_018500622v1 9297156 25 - 10531588 ACTTTATTCAGTC-TATGC-------------TCTCCCA i aotNan1.NW_018500622v1 I 4 C 0 s canFam3.chr5 80477552 39 + 88915250 ATCATATTCAGCCTTATGCCTACTGGTTTttttttttta i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933626 26 + 1009443 ATCATGTTCAGCCTTATGC-------------TTTCCCA i dasNov3.JH569970 C 0 I 134 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e cerAty1.NW_011999143v1 20809407 19 + 43916225 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=18570.000000 s hg38.chr16_GL383557v1_alt 64619 3 + 89672 ACA s panTro5.chr16 21496083 3 - 81586097 ACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558016 3 - 90481686 ACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790513 3 + 3010529 ACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902748 3 + 163208435 ACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376511 3 - 74971481 CCA i rheMac8.chr20 C 0 I 3 s macFas5.chr20 21089111 3 - 78541002 CCA i macFas5.chr20 C 0 I 3 s macNem1.NW_012011355v1 14481852 3 + 26466322 CCA i macNem1.NW_012011355v1 C 0 I 6 s chlSab2.chr5 58239623 3 + 75399963 CCA i chlSab2.chr5 C 0 I 7 s manLeu1.NW_012101698v1 6799997 3 - 7209941 CCA i manLeu1.NW_012101698v1 C 0 I 7 s colAng1.NW_012123265v1 543108 3 + 3907144 CCA i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21547553 3 - 44557958 CCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358816 3 + 6628207 CCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3342946 3 - 5917169 CCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297181 3 - 10531588 CCA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80477591 3 + 88915250 aga i canFam3.chr5 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e cerAty1.NW_011999143v1 20809407 19 + 43916225 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=39219.000000 s hg38.chr16_GL383557v1_alt 64622 7 + 89672 Ctttt--------tt s panTro5.chr16 21496086 12 - 81586097 Ctttt---ttttgtt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558019 12 - 90481686 Ctttt---tttgttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790516 7 + 3010529 Ctttt--------tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902751 15 + 163208435 Ctttttttttttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376517 3 - 74971481 ----t--------tt i rheMac8.chr20 I 3 C 0 s macFas5.chr20 21089117 4 - 78541002 ---tt--------tt i macFas5.chr20 I 3 C 0 s macNem1.NW_012011355v1 14481861 7 + 26466322 ttttt--------tt i macNem1.NW_012011355v1 I 6 C 0 s cerAty1.NW_011999143v1 20809426 7 + 43916225 ttttt--------tt i cerAty1.NW_011999143v1 I 19 C 0 s chlSab2.chr5 58239633 7 + 75399963 ttttt--------tt i chlSab2.chr5 I 7 C 0 s manLeu1.NW_012101698v1 6800007 7 - 7209941 ttttt--------tt i manLeu1.NW_012101698v1 I 7 C 0 s colAng1.NW_012123265v1 543112 7 + 3907144 ttttt--------tt i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21547556 7 - 44557958 CTTTT--------TT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6358819 7 + 6628207 Ctttt--------tt i saiBol1.JH378225 C 0 I 425 s cebCap1.NW_016107433v1 3342949 7 - 5917169 CTTTT--------TT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297184 7 - 10531588 CTTTT--------TT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80477594 7 + 88915250 cttta--------tt i canFam3.chr5 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=10920.000000 s hg38.chr16_GL383557v1_alt 64629 1 + 89672 t s panTro5.chr16 21496098 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558031 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790523 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902766 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376520 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089121 1 - 78541002 t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481868 1 + 26466322 t i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809433 1 + 43916225 t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239640 1 + 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800014 1 - 7209941 t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543119 1 + 3907144 t i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547563 1 - 44557958 T i calJac3.chr20 C 0 I 102 s cebCap1.NW_016107433v1 3342956 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 I 102 s aotNan1.NW_018500622v1 9297191 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 I 102 s canFam3.chr5 80477601 1 + 88915250 t i canFam3.chr5 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e saiBol1.JH378225 6358826 425 + 6628207 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=36005.000000 s hg38.chr16_GL383557v1_alt 64630 7 + 89672 -ttttttt s panTro5.chr16 21496099 7 - 81586097 -tgttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558032 7 - 90481686 -tgttttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790524 7 + 3010529 -ttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902767 7 + 163208435 -ttttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376521 7 - 74971481 -ttttttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089122 7 - 78541002 -ttttttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481869 7 + 26466322 -ttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809434 7 + 43916225 -ttttttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239641 7 + 75399963 -ttttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800015 7 - 7209941 -ttttttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543120 7 + 3907144 -ttttttt i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80477602 7 + 88915250 atttatt- i canFam3.chr5 C 0 I 258 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=408334.000000 s hg38.chr16_GL383557v1_alt 64637 83 + 89672 gagatggagtctcactctgccacaca-ggctggagt------gtagtggcgtgatctccgctcactgcaagctccgcctccccggttcaa s panTro5.chr16 21496106 83 - 81586097 gagatggagtctcactctgccacaca-ggctggagt------gtagtggcatgatctccgctcactgcaagctccgcctccccggttcaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558039 83 - 90481686 gagatggagtctcactctgccacaca-ggctggagt------gtagtggcatgatctccgctcactgcaagctccgcctccccggttcaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790531 83 + 3010529 gagatggagtctcactctgccgcaca-ggctggagt------gtagtggcgtgatctccgctcactgcaagctccgcctccccggttcaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902774 83 + 163208435 gagatggagtctcgctctgtcgcaca-ggctggagt------atagtggtgtgatctccgctcactgcaagctccgcctcccgggttcaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376528 89 - 74971481 gagatgatgtcttgctctgttgccca-ggctggagttggagtgtagtagcttgatctcggctctctgcaagctccgcctcccgagttcaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089129 89 - 78541002 gagatgatgtcttgctctgttgccca-ggctggagttggagtgtagtagcttgatctcggctcactgcaagctccgcctcccgagttcaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481876 89 + 26466322 gagatgatgtcttgctctgttgccca-ggctggagttggagtgtagtagcttgatctcggctcactgcaagctccgcctcccgagttcaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809441 90 + 43916225 gagatgatgtcttgctctgttgcccagggctggagttgagtgttagtggcttgatctcggctcactgcaagctgcgcctccctagttcaa i cerAty1.NW_011999143v1 C 0 I 61 s chlSab2.chr5 58239648 89 + 75399963 ttggagaagtctcgctctgttgccca-ggctggagttggagtgtagtagcttgatctcggctcactgcaagctctgcctcccgagttcaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800022 89 - 7209941 ttgatgatgtcttgctctgttgccca-ggctggagttggagtgtagtggcttgatctcggctcactgcaagctccgcctcccgagttcaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543127 89 + 3907144 gagatggtgtcttgctctgttgccca-ggctggagttggagtgtagtggctcgatctcggctcactgaaagctccgcctcctgagttcaa i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80477609 258 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=184237.000000 s hg38.chr16_GL383557v1_alt 64720 39 + 89672 gccgttctcctgcctcagcctcccaaatagctgggacta s panTro5.chr16 21496189 39 - 81586097 gccgttctcctgcctcagcctcccaaatagctgggacta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558122 39 - 90481686 gccgttctcctgcctcagcctcccaaatagctgggacta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790614 39 + 3010529 gccattctcctgcctcagcctcccaaatagctgggacta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902857 39 + 163208435 gccattctcctgcctcagcctcccaagtagctgggacta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376617 39 - 74971481 accattctcctgcctcagctttccgagtagctgggacta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089218 39 - 78541002 accattctcctgcctcagctttccgagtagctgggacta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14481965 39 + 26466322 accattctcctgcctcagctttccgagtagctgggacta i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58239737 39 + 75399963 accattctcctgcctcagctttccgagtagctgggacta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800111 39 - 7209941 accattctcctgcctcagctttccgagtagctgggacta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543216 39 + 3907144 accattctcctgcctcagctttccgagtagctgggacta i colAng1.NW_012123265v1 C 0 I 282 e canFam3.chr5 80477609 258 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e cerAty1.NW_011999143v1 20809531 61 + 43916225 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=71096.000000 s hg38.chr16_GL383557v1_alt 64759 23 + 89672 taggcgcccacgagtacgcccgg s panTro5.chr16 21496228 23 - 81586097 taggtgcccacaagtacgcccgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558161 23 - 90481686 taggtgcccacaagtacgcccgg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790653 23 + 3010529 taggcgcccatgagtacgcccgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902896 23 + 163208435 taggcgcccacgagtatgcccgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376656 23 - 74971481 taggcacctgccaccacgcccag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089257 23 - 78541002 taggcacccgccaccacgcccag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482004 23 + 26466322 taggcacccgccaccacgcccag i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58239776 23 + 75399963 taggcacccaccaccacgcccag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800150 23 - 7209941 taggcacccgccaccacgcccgg i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80477609 258 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e colAng1.NW_012123265v1 543255 282 + 3907144 I e cerAty1.NW_011999143v1 20809531 61 + 43916225 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=198443.000000 s hg38.chr16_GL383557v1_alt 64782 42 + 89672 ctaattttttgtatttttagtagagatggggtttcactgtgt s panTro5.chr16 21496251 42 - 81586097 ctaattttttgtatttttagtagagatggggtttcactttgt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558184 42 - 90481686 ctaattttttgtatttttagtagagatggggtttcactgtgt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790676 42 + 3010529 ctaattttttgtatttttagtagagacggggtttcaccgtgt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902919 42 + 163208435 ctaattttttgtatttttagtagagacggggtttcaccgtgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376679 42 - 74971481 ctaattttttgtatttttagtagagacggggtttcaccgtgt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089280 42 - 78541002 ctaattttttgtatttttagtagagacggggtttcaccgtgt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482027 42 + 26466322 ctaattttttgtatttttagtagagacggggtttcaccgtgt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809592 41 + 43916225 ctacatttttgta-ttttagtagagacggggtttcaccgtgt i cerAty1.NW_011999143v1 I 61 C 0 s chlSab2.chr5 58239799 42 + 75399963 ctaattttttgtatttttagtagagacagggtttcaccgtgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800173 42 - 7209941 ctaattttttgtatttttagtagagacggggtttcaccgtgt i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80477609 258 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e colAng1.NW_012123265v1 543255 282 + 3907144 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=148291.000000 s hg38.chr16_GL383557v1_alt 64824 25 + 89672 tagccaggatggtcttgatctcctg s panTro5.chr16 21496293 25 - 81586097 tagccaggatggtcttgatctcctg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558226 25 - 90481686 tagccaggatggtcttgatctcctg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790718 25 + 3010529 tagccaggatggtcttgatctcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902961 25 + 163208435 tagccagaatagtctcaatctcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376721 25 - 74971481 tagccaggatggtcttgatctcctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089322 25 - 78541002 tagccaggatggtcttgatctcctg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482069 25 + 26466322 tagccaggatggtcttgatctcctg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809633 25 + 43916225 tagccaggatggtcttgatctcctg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239841 25 + 75399963 tagccaggatggtcttgatctcctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800215 25 - 7209941 tagccaggatggtcttgatctcctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543537 25 + 3907144 tagtcaggatggtcttgatctcctg i colAng1.NW_012123265v1 I 282 C 0 e canFam3.chr5 80477609 258 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=375290.000000 s hg38.chr16_GL383557v1_alt 64849 69 + 89672 acctcgtgatctgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgccctgcc- s panTro5.chr16 21496318 69 - 81586097 acctcgtgatctgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccctgcc- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558251 69 - 90481686 acctcgtgatctgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccctgcc- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790743 68 + 3010529 acc-cgtgatctgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgccctgcc- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53902986 69 + 163208435 acctcgtgatctgcctgccttggcctcccaaagtgctgggattacaagcgtgagccaccgcgcccagcc- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376746 69 - 74971481 acctcgtgatctgcctgacttggcctcccaaagtgctgggattacaggcatgagacactgcgcctggcc- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089347 69 - 78541002 acctcgtgatctgcctgacttggcctcccaaagtgctgggattacaggcatgagacactgcgcctggcc- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482094 69 + 26466322 acctcgtgatctgcctgacttggcctcccaaagtgctgggattacaggcatgagacactgcgcctggcc- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809658 69 + 43916225 acctcgtgatctgcctgacttggcctcccaaagtgctgggattacaggcatgagacactgcgcctggcc- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239866 69 + 75399963 acctcgtgatctgcgtgccttggcctcccaaagtgctgagattacaggcatgagacactgcgcctggcc- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800240 69 - 7209941 acctcgtgatctgcctgacttggcctcccaaagtgctgggattacaggcatgagacactgcgcctggcc- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543562 69 + 3907144 acctcgtgatccgcctgccttggcctcccaaagtgctgggattacaagcatgagacactgcgcctggcc- i colAng1.NW_012123265v1 C 0 C 0 s canFam3.chr5 80477867 50 + 88915250 ACCCTGTCATCTTGACACCTCTCCTTCCCAAAACAAGAGGA--------------------GCCTATTTA i canFam3.chr5 I 258 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e aotNan1.NW_018500622v1 9297192 102 - 10531588 I e cebCap1.NW_016107433v1 3342957 102 - 5917169 I e saiBol1.JH378225 6358826 425 + 6628207 I e calJac3.chr20 21547564 102 - 44557958 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=13600.000000 s hg38.chr16_GL383557v1_alt 64918 1 + 89672 C s panTro5.chr16 21496387 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558320 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790811 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53903055 1 + 163208435 C i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376815 1 - 74971481 C i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089416 1 - 78541002 c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482163 1 + 26466322 C i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809727 1 + 43916225 C i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239935 1 + 75399963 C i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800309 1 - 7209941 C i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543631 1 + 3907144 C i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547666 1 - 44557958 C i calJac3.chr20 I 102 C 0 s saiBol1.JH378225 6359251 1 + 6628207 C i saiBol1.JH378225 I 425 C 0 s cebCap1.NW_016107433v1 3343059 1 - 5917169 C i cebCap1.NW_016107433v1 I 102 C 0 s aotNan1.NW_018500622v1 9297294 1 - 10531588 C i aotNan1.NW_018500622v1 I 102 C 0 s canFam3.chr5 80477917 1 + 88915250 C i canFam3.chr5 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e dasNov3.JH569970 933652 134 + 1009443 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=525461.000000 s hg38.chr16_GL383557v1_alt 64919 45 + 89672 ATCTTTTCAGAGCTATTTTATgcacataatacatagcgttctgta s panTro5.chr16 21496388 45 - 81586097 ATCTTTTCAGAGCTATTTTATgcacataatacatagcgttctgta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558321 45 - 90481686 ATCTTTTCAGAGCTATTTTATgcacataatacatagcgttctgta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790812 45 + 3010529 ATCTTTTCAGAGCTATTTTATGCACATAAtatgtagtgtcctgta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53903056 43 + 163208435 ATCTTTTCAGAGCTATTTTATTTACATAatac--agtgttctgta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376816 45 - 74971481 ATCTTTTTAGAGCTATTTTATgcacataatacatagtgtcctgta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089417 45 - 78541002 atctttttagagctattttatgcacataatacatagtgtcctgta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482164 45 + 26466322 ATCTTTTTAGAGCTATTTTATgcacataatacatagtgtcctgta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809728 45 + 43916225 ATCTTTTTAGAGCTATTTTATgcacataatacatagtgtcctgta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239936 45 + 75399963 ATCTTTTCAGAGCTATTTTATgcacataatacagagtgtcatgta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800310 45 - 7209941 ATCTTTTTAGAGCTATTTTATgcacataatacatagtgtcctgta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543632 45 + 3907144 ATCTTTTCAGAGCTATTTTATgcacataatacatagtgtcctgta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547667 45 - 44557958 ATCTTTTCAGAGCTATTTTATGcatataatatgtagtgttctgta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6359252 45 + 6628207 ATCTTTTCAGAGCTATTTTATgcatataatacatagtgttctgta i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343060 45 - 5917169 ATCTTTTCGGAGCTATTTTAGgcatataatacatagtgttctgta i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297295 45 - 10531588 ATCTTTTCAGAGCTATTTTATgcatataatacatagtgttctgta i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80477918 43 + 88915250 ATCTTTTCAGATC--TTTTATgcatacaatacatgctattctgca i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 933786 45 + 1009443 ATTTTTTCAAAGATACTTTATGTACACAATACACACTCTTCTGTA i dasNov3.JH569970 I 134 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e otoGar3.GL873566 13722830 1294 + 13852661 I a score=1359685.000000 s hg38.chr16_GL383557v1_alt 64964 134 + 89672 tcttgctt-ttgttgctcagtgttatatcacggagactgacccacattaat--a--------------cacatatatatcggtcatgcccattctgaaacacag---aatagt-ccactcattttgtccatgtatcatga----tttacttatccactc- s panTro5.chr16 21496433 134 - 81586097 tcttgctt-ttgttgctcagtgttatatcatggagactgacccacattaat--a--------------cacatatatatcggtcatgcccattctgaaacatag---aatagt-ccactcattttatccatgtatcatga----tttacttatccactc- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558366 134 - 90481686 tcttgctt-ttgttgctcagtgttatatcatggagactgactcacattaat--a--------------cacatatatatcggtcatgcccattctgaaacatag---aatagt-ccactcattttatccatgtatcatga----tttacttatccactc- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790857 134 + 3010529 tcttgctt-ttcttgctcagtgttatatcatggagactgacccacattaac--a--------------cacatatatatcggtcatgcccattctgaaacacag---aatagt-ccactcattttatccatgtatcatga----tttacttatccactc- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53903099 134 + 163208435 ttttgctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------cacatatatatcagtcatgcccattctgaaacacag---aatagt-ccactcattttatccatgtatcatga----tttacttatccactc- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376861 134 - 74971481 tcttgctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------tacatatacatcagtcatgcccattctgaaacatac---aacact-ccactcattttatgcatgtatcatga----tttacttatccagtc- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089462 134 - 78541002 tcttgctt-ttcttgctcagtgttatatcatggagactgacccactttaat--a--------------tacatatacatcagtcatgcccattctgaaacatac---aatact-ccactcattttatgcatgtatcatga----tttacttatccagtc- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482209 134 + 26466322 tcttgctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------tacatatacatcagtcatgcccattctgaaacatac---aatact-ccactcattttatgcatgtatcatga----tttacttatccagtc- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809773 134 + 43916225 tcttgctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------tacatatacatcagtcatgcccattctgaaacatac---aatact-ccactcattttatgcatgtatcatga----tttacttatccagtc- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58239981 134 + 75399963 tcttcctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------cacatatacatcagtcatgcccattctgaaacatac---aatact-ccactcattttatgcatgcatcatga----tttacttatccactc- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800355 134 - 7209941 tcttgctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------tacatatacatcagtcatgcccattttgaaacatac---aatact-ccactcattttatgcatgtatcatga----tttacttatccagtc- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543677 134 + 3907144 tcttgctt-ttcttgctcagtgttatatcatggagactgacccacattaat--a--------------cacatatacatcagtcatgcctattctgaaacatac---aatact-ccactcattttatgcatgtatcatga----tttacttatccactc- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547712 133 - 44557958 tcttgcttcttcttgcttagtattatatcatggagactgacccacatcaatata--------------cacatacacatcagtcatgcccattccgaaacatac---agtagt-ccactcatttt----atgcatcatga----tttacttatccactc- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6359297 137 + 6628207 tcctgcttcttcttgcttagtgttatataatagagactgacccacatcaatata--------------cacatatacatcactcatgcatattctgaaacacac---agtagt-ccactaattttatgcatgcatcatga----tttacttatccactc- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343105 137 - 5917169 tcttgctgcttcttgcttagtgttatatcatggagactgacccacaccaatata--------------cacatatacatcagtcatgcccattctgaaacatac---agtagt-ccactcattttatgcatgcatcatga----tttatttatccaccc- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297340 137 - 10531588 tcttgcttcttcttgcttagtgttacatcatggagactgacccacatgaataca--------------cacatatacatcagtcatgcccattctgaaacatac---agtagt-ctactcactttatgcatgcatcatga----tttacttatccactc- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13724124 107 + 13852661 TCTTGCAT-TTTTCATTTAGTGTCATATCATGGAGACTGACCCGTCTCACT--C--------------AACA---------------CCCCTTTCGAAGAACATATAAATAAT-CGATTCCTTTTCTGGATGTATCAta-------------------c- i otoGar3.GL873566 I 1294 C 0 s canFam3.chr5 80477961 151 + 88915250 tgttgtat-tttttatttagcattatatcatggagactgagccatgtcagt--aTCAATAACTACAGCTATATATCCATCACTCTTGCTC-CTCTCACACATAA---TGTATT-CACATTTTTTTAAAAAttttttttaaagattttatttatttattc- i canFam3.chr5 C 0 I 1027 s dasNov3.JH569970 933831 73 + 1009443 CCTTGTTT-TT----------------------------------ATTAAA--G-------------------------------------------GATACAC---GATAATCCCCCccattttatggatgtgctataa----tttacttatctagttt i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I a score=980605.000000 s hg38.chr16_GL383557v1_alt 65098 82 + 89672 tgcttaatggacattagcttgtttcatatctttgtctactacaaacaaag----------ctg-tctctgtataaatgtc-tttttgcacagct s panTro5.chr16 21496567 92 - 81586097 tgcttaatggacattagcttgtttcatatctttgtctactacaaacaaagctgcaatgaactg-tctctgtataaacgtc-tttttgcacagct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558500 92 - 90481686 tgcttaatggacattagcttgtttcgtatctttgtctactacaaacaaagctgcaatgaactg-tctctgtataaacgtc-tttttgcacagct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 790991 92 + 3010529 tgcttaatggacattagcttgtttcatatctttgtctactacaaacaaagctgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53903233 92 + 163208435 tgcttaatggacattagcttgtttcatatctttgtctactacaaacaaatctgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21376995 91 - 74971481 tgcttagtggacattagcttgtttcatatctttgtctactac-aacaaagttgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089596 91 - 78541002 tgcttagtggacattagcttgtttcatatctttgtctactac-aacaaagttgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482343 91 + 26466322 tgcttagtggacattagcttgtttcatatctttgtctactac-aacaaagttgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809907 91 + 43916225 tgcttagtggacattagcttgtttcatatctttgtctactac-aacaaagttgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240115 91 + 75399963 tgcttagtggacattagcttgtttcctatctttgtctactac-aacaaagctgcaatgaactg-tctctgtataaatgtc-tttttgcacagct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6800489 91 - 7209941 tgcttagtggacattagcttgtttcatatctttgtctactac-aacaaagttgcaatgaactg-tctctgtataaatgtc-tttttgcacaGCT i manLeu1.NW_012101698v1 C 0 I 7150 s colAng1.NW_012123265v1 543811 88 + 3907144 tgcttagtggacattagcttgtttcatatctttgt---ctac-aacaaagctgcaatgaactg-tctctgtataaatatc-tttttgcacagct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547845 94 - 44557958 tacttaatggacattatcttgtttcatatctttgtctactataaacaaagctgcaatgaactggtctctgtatagaagtcttttttgcatagct i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6359434 94 + 6628207 tacttaatggacataatcttgtttcatatctttgtctactataaacaaagctgcaatgaactgatctctgtataaaagtcttttttgcatagct i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343242 94 - 5917169 tacttaatggacattatcttgtttcacatctttgtctactataaacaaaactgcaatgaactggtctctgtataaaagtcttttttgcatagct i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297477 94 - 10531588 tacttaatggacattatcttgtttcatatctttgtctactataaacaaagctgcaatgaactggtctctgtataaaagtattttttgcatagct i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13724231 92 + 13852661 tgctttatacacattagactgtttctagtctttggctactaccagtaaggctgcaatgaatca-tctctgcataaatgtc-tttctgcacaact i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 933904 76 + 1009443 tccttaatggacat----ttacttccaatctttggctactacaaacaagattgcaatgaatta-tctc-------------cttttgcacaatt i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80478112 1027 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I a score=27323.000000 s hg38.chr16_GL383557v1_alt 65180 40 + 89672 agaagcatatatatctatatacagatatatat--------------------------atacatat s panTro5.chr16 21496659 34 - 81586097 agaagcatatatatctatatatagacatat--------------------------------atat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558592 36 - 90481686 agaagcatatatatctatatatagatatatat------------------------------atat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791083 66 + 3010529 agaagcatatatatctatatatagatctatatatagatacgtatctatatatagatctatatatag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53903325 38 + 163208435 aaaagcatatata--taTCTATAGATATATAT--------------------------ACACACAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377086 27 - 74971481 aaaagcatatatatatatatatatata--------------------------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089687 27 - 78541002 aaaagcatatatatatatatatatata--------------------------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482434 19 + 26466322 aaaagcatatatatatata----------------------------------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20809998 17 + 43916225 aaaagcatatatatata------------------------------------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240206 34 + 75399963 aaaagcatatatatatatatatatata--tat------------------------------atat i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 543899 36 + 3907144 aaaagcatatatatatatatatatatatatat------------------------------atat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547939 22 - 44557958 gaaaaaaaaaaaaaatatatat-------------------------------------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6359528 30 + 6628207 aaaagcatatatatatgtatatatacatat------------------------------------ i saiBol1.JH378225 C 0 I 268 s cebCap1.NW_016107433v1 3343336 36 - 5917169 gaaagtaaatatatatatatatatatatatatatat------------------------------ i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297571 6 - 10531588 gaaagt------------------------------------------------------------ i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13724323 14 + 13852661 gaaagcatatggag---------------------------------------------------- i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 933980 6 + 1009443 gaaagc------------------------------------------------------------ i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80478112 1027 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e manLeu1.NW_012101698v1 6800580 7150 - 7209941 I a score=-18929.000000 s hg38.chr16_GL383557v1_alt 65220 15 + 89672 --atatatatatatata s panTro5.chr16 21496693 15 - 81586097 --ctatatatatataaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558628 15 - 90481686 --ctatatatatataaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791149 15 + 3010529 --atatatatatataaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53903363 15 + 163208435 --ATATATATATCTATA i nomLeu3.chr2 C 0 I 936 s rheMac8.chr20 21377113 4 - 74971481 -------tatg------ i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089714 8 - 78541002 ---tatgtatg------ i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482453 4 + 26466322 -------tatg------ i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810015 4 + 43916225 -------taaa------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240240 9 + 75399963 --atatatatg------ i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 543935 9 + 3907144 --atatatatg------ i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547961 15 - 44557958 --atatatatatatata i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3343372 15 - 5917169 --atatatatatatatt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297577 13 - 10531588 ----atatatatataaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13724337 1 + 13852661 ----------g------ i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 933986 11 + 1009443 atatctgtagg------ i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80478112 1027 + 88915250 I e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e manLeu1.NW_012101698v1 6800580 7150 - 7209941 I e saiBol1.JH378225 6359558 268 + 6628207 I a score=22184.000000 s hg38.chr16_GL383557v1_alt 65235 8 + 89672 aagaatga s panTro5.chr16 21496708 8 - 81586097 aagaatga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558643 8 - 90481686 aagaatga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791164 8 + 3010529 aagaatga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904314 8 + 163208435 aagaatga i nomLeu3.chr2 I 936 C 0 s rheMac8.chr20 21377117 5 - 74971481 ---aactc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089722 5 - 78541002 ---aactc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482457 5 + 26466322 ---aactc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810019 5 + 43916225 ---aactc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240249 5 + 75399963 ---aactc i chlSab2.chr5 C 0 C 0 s colAng1.NW_012123265v1 543944 5 + 3907144 ---aactc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547976 8 - 44557958 taaaactc i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3343387 8 - 5917169 aaaaactc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297590 8 - 10531588 taaaactc i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13724338 6 + 13852661 aagaac-- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80479139 8 + 88915250 AAGAACTC i canFam3.chr5 I 1027 C 0 s dasNov3.JH569970 933997 8 + 1009443 aagacctc i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54945942 1084 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2953589 798 + 9850184 I e manLeu1.NW_012101698v1 6800580 7150 - 7209941 I e saiBol1.JH378225 6359558 268 + 6628207 I a score=28385.000000 s hg38.chr16_GL383557v1_alt 65243 2 + 89672 tt s panTro5.chr16 21496716 2 - 81586097 tt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558651 2 - 90481686 tt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791172 2 + 3010529 tt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904322 2 + 163208435 tt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377122 2 - 74971481 tt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089727 2 - 78541002 tt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482462 2 + 26466322 tt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810024 2 + 43916225 tt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240254 2 + 75399963 tt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6807730 2 - 7209941 tt i manLeu1.NW_012101698v1 I 7150 C 0 s colAng1.NW_012123265v1 543949 2 + 3907144 tt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547984 2 - 44557958 tt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3343395 2 - 5917169 tc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297598 2 - 10531588 tc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54947026 2 + 72247402 tt i micMur3.chr20 I 1084 C 0 s proCoq1.NW_012152729v1 2954387 2 + 9850184 tt i proCoq1.NW_012152729v1 I 798 C 0 s otoGar3.GL873566 13724344 2 + 13852661 tc i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80479147 2 + 88915250 TT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934005 2 + 1009443 tt i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22482658 326 - 129401213 I e saiBol1.JH378225 6359558 268 + 6628207 I a score=2609389.000000 s hg38.chr16_GL383557v1_alt 65245 189 + 89672 agaactgaaatttctaagtcaaagaccatgtggactttaaaatttttaaggtat-tg-ccaacatgtcctccaaaagggttaggataatttacacaatgtgtgagagtactgtttccctataccttcag--aacactgtatattatcaagtct-ttgatctttgctaatctaacagatataaaaA-A-CTTCCCAT s panTro5.chr16 21496718 189 - 81586097 agaactgaaatttctaagtcaaagaccacatggactttaaaatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggataatttacacaatgtgtgagagtactgtttccctataccttcag--aacactgtatattatcaagtct-ttgatctctgctaatctaacagatataaaaA-A-CTTCCCAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558653 189 - 90481686 agaactgaaatttctaagtcaaagaccacatggactttaaaatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggataatttacacaatgtgtgagagtactgtttccctataccttcag--aacactgtatattatcaagtct-ttgatctctgctaatctaacagatataaaaA-A-CTTCCCAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791174 189 + 3010529 agaactgaaatttctaagtcaaagaccatgtggactttaaaatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggatagtttacacaatgtgtgagagtactgtttccctaaaccttcag--aacactgtatattatcaagtct-ttgatctttcctaatctaacagatataaaaa-a-cttcccat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904324 189 + 163208435 agaactgaaatttctaagtcaaagaccatgtggactttaaaatttttaaggtat-ta-ccaaaatgtcctccaaaagggttaggataatttacacaatgtacgagagtactgtttccctataccttcag--aacactgtatattatcaagtct-ttgatctttgctaatctaacagatataaaaa-a-cttcccat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377124 189 - 74971481 agaattgaaattcctaagtcaaagatcatgtggacttaaaaaattttaagatat-tg-ccaaaatgtcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactgtatattatcaagtct-ttgatctttgctaatctaacagatataaaag-a-cttcccat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089729 189 - 78541002 agaattgaaattcctaagtcaaagatcatgtggacttaaaaaattttaagatat-tg-ccaaaatgtcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactgtatattatcaagtct-ttgatctttgctaatctaacagatataaaag-a-cttcccat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482464 189 + 26466322 agaattgaaattcctaagtcaaagatcatgtggacttaaaaaattttaagatat-tg-ccaaaatgtcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactgtatattatcaagtct-ttgatctttgctaatctaacagatataaaag-a-cttcccat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810026 189 + 43916225 agaattgaaattcctaagtcaaagatcatgtggacttaaaaaattttaagatat-tg-ccaaaatgtcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactctatattatcaagtct-ttgatctttgctaatctaacagatataaaaG-A-CTTCCCAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240256 188 + 75399963 agaactgaaattcctaagtcaaagatcatgtggactt-caaaattttaagatat-tg-ccaaaatgtcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactgtatattatcaactct-ttgatctttgctaatctaacagatataaaaG-A-CTTCCCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6807732 189 - 7209941 agaattgaaattcctaagtcaaagatcatgtggacttaaaaaattttaagatat-tg-ccaaaatgtcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactctatattatcaagtct-ttgatctttgctaatctaacagatataaaag-a-cttcccat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 543951 189 + 3907144 agaactgaaatttctaagtcaaagatcatatggacttaaaaaattttaagatat-tg-ccaaaacatcctccaaaatggttaggataatgttcacaatgtgtgagagtactgtttccctacaccctcac--aacactgtatattatcaagtct-ttgatctttgctaatctaacagatacaaaaG-A-CTTCCCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21547986 188 - 44557958 ggaaatgaaatttctaagtcaaagatta-gtggactttaaaatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggataatttacacaacgtgtgagagtactattttcctataccctcac--aacactgagtattatcaactct-ttgatctttgctaatctaatggatataaaaa-a-tttcccat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6359826 188 + 6628207 agaaatgaaatttcaaagtcaaagatta-gtggacttaaaaatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggataatttacacaacgtgtgagagtactgttttcctataccctcac--aacattgtgtattatcaactct-ttgatctttgctaatctaacggatataaaaa-a-tttcccat i saiBol1.JH378225 I 268 C 0 s cebCap1.NW_016107433v1 3343397 188 - 5917169 agaaatgaaatttctaagtcaaagatta-gtcggcttaaacatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggataatttacacaacgtgtgagagtaccgttttcctataccctcac--aacactgtgtattatcaactct-ttgatctttgctaatttaacggatataaaaa-a-tttcccat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297600 188 - 10531588 agaaatgaaatttctaagtcaaagatta-gtggactttaaaatttttaaggtat-tg-ccaaaatgtcctccaaaagggttaggataatttacacaatgtgtgagagtactgttttcctataccctcac--aacactgtgtattatcaactct-ttgatctttgctaatctaacggatataaaaa-a-tttcccat i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54947028 189 + 72247402 agaatcgaaacttctaaatcaaagactatgttggttttaaatttttaaatgtat-tg-ccaaaaagtccttcaaaaggcttacactaatttacacaatgtgtcagagtgccgcttccttacacacacacataatactgtgtattatcaactct-ttcattttc-ctaatctaacaggtataaaaa---tTTCCCAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2954389 187 + 9850184 agaattgaaacttctaaatcaaagaccatgtggatttcaaatttttaaatgtat-tg-cgaaaaagtcctccaaaaggcttatactaatttacacaatgtgggagagtgctgcttccttatacccccac--gactctgtgtattaccaactct-ttcatttttgctaatctaacaggcacaaaaa----ttcccaa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13724346 182 + 13852661 agaattgaaatttctaaagtgaagaccgtgtggattt-ggatttttagttagtt-ta-gtataagctcc----aaaggcttatactaacttgtgcaatgtgtgagagtgctgctttcttatatcttcac--gacactgtgtactattaactct-ttgagttttgctaatttaaca-gtacaaaaa---tTTCCCAT i otoGar3.GL873566 C 0 I 299 s canFam3.chr5 80479149 188 + 88915250 aaaattggaacttctgattcaaagattatgtgtattt--aatttttaaaaatgcatc-tcaaagtgtcctctaaaggggccatactaatatatacagtgtatga-agtggtattt-cctgtatcctcac--agcattgtgcattatcaactgtactgatttttgttaacctaacaagtacaaaaAAA-TTTCCTAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934007 186 + 1009443 agaattggaatatctagaccaaagattatgtggccatgaaa---tttaagatac-tgcccaaaatattctccaaagagattatgctaatttatgcaacgcatgagagtactgtttacccatatcctcat--aacactgtgtattatcaactct---gatctttcctaatttaacaggtaaaaaaA-ACCCTCCCAC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22482658 326 - 129401213 I a score=1259177.000000 s hg38.chr16_GL383557v1_alt 65434 104 + 89672 CAGTTTTACTTTCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTGTCATGGGGGAAATTATCATTATGTGTGACAAAGGCAAAGATGTGTGGCTTCACTA s panTro5.chr16 21496907 104 - 81586097 CAGTTTTACTTTCAGACGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCATGGGGGAAATTATCATTATGTGTGACAAAGGCAAAGATGTGTGGCTTCACTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558842 104 - 90481686 CAGTTTTACTTTCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCATGGGGGAAATTATCATTATGTGTGACAAAGGCAAAGATGTGTGGCTTCACTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791363 104 + 3010529 cagttttactttCAGAAGCACTTAAGGGATTAAGTGCCAGTAAAAGGTGTCATGGGGGAAATTATCATTATGTGTGACAAAGGCAAAGATGTGTGGCTTCACTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904513 104 + 163208435 cagttttactttCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTGTCGTGGGGGAAATTATCATTATGTGTGACAAAGGCAAAGATGTGTGGCTTCACTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377313 102 - 74971481 tagttttactttCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCGGGGGGAACATTATCATTATGTGGGACAAAGGCAAACA--TGTGGCTTCACTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21089918 102 - 78541002 tagttttactttCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCGGGGGGAACATTATCATTATGTGGGACAAAGGCAAACA--TGTGGCTTCACTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482653 102 + 26466322 tagttttactttCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCGGGGGGAACATTATCATTATGTGGGACAAAGGCAAACA--TGTGGCTTCACTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810215 102 + 43916225 CAGTTTTACTTTCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCGGGGGGAACATTATCATTATGTGGGACAAAGGCAAACA--TGTGGCTTCACTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240444 102 + 75399963 CAGTTTTACTTTCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCGGGGGGAACATTATCATTATGTGTGACAAAGGCAAAGA--TGTGGCTTCACTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6807921 102 - 7209941 cagttttactttCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATCGGGGGGAACATTATCATTATGTGGGACAAAGGCAAACA--TGTGGCTTCACTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544140 102 + 3907144 CAGTTTTACTTTCAGAAGCACTTAAGGGACTAAGTGCCAGTAAAAGGTATTGGGGGGAACATTATCATTATGTGTAACAAAGGCAAAGA--TGTGGCTTCACTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548174 102 - 44557958 cagttttactttTAGAAGCACTTAAGGGACCAAATGCCAGTAAAAGGTATTGGAGTAAACATTATCATTATGTGTGACAAAGGCAAAGA--TGTGGCTTCACTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360014 102 + 6628207 cagttttactttTAGAAGCACTTAAGGGACCAAGTACCAGTAAAAGGTATTGGGTTAAACATTACCATTATGTGTGACAAAGGCAAAGA--TAAGGCTTCACTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343585 102 - 5917169 cagttttactttTAGAAGCACTTAAGGGACCAAGTACCAGTAAAAGGTATTGGGGTAAACATTATCATCATGTGTGACATAGGCAAAGA--TGTGGCTTCACTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297788 102 - 10531588 cagttttactttTAGAAGAACTTAAGGGACCAAGTGCCAGTAAAAGGTATTGGGGTAAACATTATCATTATGTGTGACAAAGGCAAAGA--TGTGGCTTCACTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54947217 101 + 72247402 CAGATTTAATGACAGAAGCACGTGAGGGACCAACTGACAGTAAAAGATGTCA-GGTGCACATTATCATTGGGTGTGATAAGGGCAAGGA--TATGGCTTCACTA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2954576 101 + 9850184 cagttttaatGAAAGAAGCACTTGAGGGACCAACTGACAGCAAAAGATGTCA-GCTGTACATTATCATTGGGTGTGATAAGGGCAAGGA--CATGACTTCACTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13724827 78 + 13852661 CACTTTCAATGACAGAAGCACTTAA-----------------------GTCA-AGTGTACATTATCATTATGTGGAAAAAAGGCAAAGA--TGTGGCTTTGCCT i otoGar3.GL873566 I 299 C 0 s canFam3.chr5 80479337 90 + 88915250 TAGATTTA-------AAGCACCTAAGGGACCAACTGCCAGAAAAAGGCATCAGGTGGA-------CATTATGTGTGATAAAGACAAGCATGTGGgggatccctg i canFam3.chr5 C 0 I 281 s dasNov3.JH569970 934193 36 + 1009443 TAGTTC------------------------------------------------------------------TGTGACAAAGGCAAGGA--TCTGTTGTCAATG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22482658 326 - 129401213 I a score=539971.000000 s hg38.chr16_GL383557v1_alt 65538 39 + 89672 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC s panTro5.chr16 21497011 39 - 81586097 CTC-CTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558946 39 - 90481686 CTC-CTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791467 39 + 3010529 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904617 39 + 163208435 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377415 39 - 74971481 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090020 39 - 78541002 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482755 39 + 26466322 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810317 39 + 43916225 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240546 39 + 75399963 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808023 39 - 7209941 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544242 39 + 3907144 CTC-TTTCAGTCTTTGGTCAAGGACTCAAATCTATAAAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548276 38 - 44557958 CTC-TTTCAGTCTTTGATCAA-GACTCAAGTCTATAAAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360116 36 + 6628207 CTC-TTTCAGTCTTTGATCAA-GACTCAAGTCTACAAA-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343687 38 - 5917169 CTC-TTTCAGTCTTTGATCAA-GACTCAAGTCTATAAAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297890 38 - 10531588 CTC-TTTCCGACTTTGATCAA-GACTCAAGTCTATAAAAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54947318 39 + 72247402 ATC-TTTGAGTCTTTGGTCAAGGACTCAAATCTATAAGAC i micMur3.chr20 C 0 I 5 s proCoq1.NW_012152729v1 2954677 40 + 9850184 ATCATTTCAGTCTTTGGTCAAGAACTCCAATCCATAAAAC i proCoq1.NW_012152729v1 C 0 I 748 s otoGar3.GL873566 13724905 33 + 13852661 ATC-TTTCAGTCCTTGGTTAAAAACTCAAATCTA------ i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 934229 39 + 1009443 ATC-TTTCAGCCTTTGATCAAAGACACAAATCCATGAAAC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e mm10.chr8 22482658 326 - 129401213 I a score=442548.000000 s hg38.chr16_GL383557v1_alt 65577 49 + 89672 TGAGAGATTTCACTTTTTGGACAgtg----tgtg---tgtgcatgtgtgagtgtAA s panTro5.chr16 21497050 49 - 81586097 TGAGAGATTTCACTTTTTGGACAgtg----tgtg---tgtgcatgtgtgagtgtAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21558985 49 - 90481686 TGAGAGATTTCACTTTTTGGACAgtg----tgtg---tgtgcatgtgtgagtgtAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791506 49 + 3010529 TGAGAGATTTCACTTTTTGGACAGTG----CGTG---TGTGCATGTGTGAGTGTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904656 49 + 163208435 TGAGAGATTTCACTTTTTGGACAgtg----tgtg---tgtgcatgtgtgagtgtAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377454 53 - 74971481 TGAGAGATTTCACTTTTTGGACAGTGTGTATGTG---TGTGCATGTTTGAGTGTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090059 53 - 78541002 TGAGAGATTTCACTTTTTGGACAGTGTGTATGTG---TGTGCATGTTTGAGTGTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482794 53 + 26466322 TGAGAGATTTCACTTTTTGGACAGTGCGTATGTG---TGTGCATGTTTGAGTGTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810356 53 + 43916225 TGAGAGATTTCACTTTTTGGACAGTGCGTATGTG---TGTGCATGTTTGAGTGTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240585 53 + 75399963 TGAGAGATTTCACTTTTTGGACAgtgtgtgtgtg---tgtgcatgtttgagtgtAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808062 53 - 7209941 TGAGAGATTTCACTTTTTGGACAGTGCGTATGTG---TGTGCATGTTTGAGTGTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544281 53 + 3907144 TGAGAGATTTCACTTTTTGGACAGTGTGTATGTG---TGTGCATGTTTGAGTGTAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548314 41 - 44557958 --AAAGATTTCACTTTTTGGACAGTG-------------TGTATGTGTTAGTGTAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360152 41 + 6628207 --AGAGATTTCATTTTTTGGACAGTG-------------TGCATGTGTGAGTGTAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343725 41 - 5917169 --AGAGATTTCACTTTTTGGACAGTA-------------CGTATGTGTGAGTGTAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297928 40 - 10531588 --AGAGATTTCAC-TTTTGGACAGTG-------------TGTATGTGTGAGTGTAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54947362 53 + 72247402 TGAGAGATTTCCTTTTTTGGATAGAGTGTGTATG---TGTGTGCATGTGAGTGTAA i micMur3.chr20 I 5 C 0 s otoGar3.GL873566 13724938 22 + 13852661 -----------------------gggtg-----g---tgtctgtggctcagtg--- i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 934268 54 + 1009443 TGAAAGAGTTCA--TGTCAGATAGCACATGTATGTGTTGTGCATGCATATATGTAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I a score=31020.000000 s hg38.chr16_GL383557v1_alt 65626 6 + 89672 AAACTG s panTro5.chr16 21497099 6 - 81586097 AAACTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559034 6 - 90481686 AAACTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791555 6 + 3010529 AAACTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904705 6 + 163208435 AAACTG i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21548355 6 - 44557958 AAACTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360193 6 + 6628207 AAACTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343766 6 - 5917169 AAACTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297968 6 - 10531588 AAACTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54947415 6 + 72247402 AAACTG i micMur3.chr20 C 0 I 1030 s dasNov3.JH569970 934322 6 + 1009443 AAACTG i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e macNem1.NW_012011355v1 14482847 0 + 26466322 C e rheMac8.chr20 21377507 0 - 74971481 C e macFas5.chr20 21090112 0 - 78541002 C e colAng1.NW_012123265v1 544334 0 + 3907144 C e manLeu1.NW_012101698v1 6808115 0 - 7209941 C e chlSab2.chr5 58240638 0 + 75399963 C e cerAty1.NW_011999143v1 20810409 0 + 43916225 C e otoGar3.GL873566 13724960 0 + 13852661 C a score=20736.000000 s hg38.chr16_GL383557v1_alt 65632 6 + 89672 ACCATC s panTro5.chr16 21497105 6 - 81586097 ACCATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559040 6 - 90481686 ACCATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791561 6 + 3010529 ACCATC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904711 6 + 163208435 ACCATC i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21548361 6 - 44557958 ACCATC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360199 6 + 6628207 ACCATC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3343772 6 - 5917169 ACCATC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9297974 6 - 10531588 ACCATC i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 934328 6 + 1009443 CTGATC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e macNem1.NW_012011355v1 14482847 0 + 26466322 C e rheMac8.chr20 21377507 0 - 74971481 C e macFas5.chr20 21090112 0 - 78541002 C e colAng1.NW_012123265v1 544334 0 + 3907144 C e manLeu1.NW_012101698v1 6808115 0 - 7209941 C e chlSab2.chr5 58240638 0 + 75399963 C e cerAty1.NW_011999143v1 20810409 0 + 43916225 C e otoGar3.GL873566 13724960 0 + 13852661 C a score=2300.000000 s hg38.chr16_GL383557v1_alt 65638 1 + 89672 A s panTro5.chr16 21497111 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559046 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791567 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904717 1 + 163208435 g i nomLeu3.chr2 C 0 C 0 s cebCap1.NW_016107433v1 3343778 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 I 3857 s aotNan1.NW_018500622v1 9297980 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 I 472 s otoGar3.GL873566 13724960 1 + 13852661 a i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 934334 1 + 1009443 A i dasNov3.JH569970 C 0 I 120 e canFam3.chr5 80479427 281 + 88915250 I e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e macNem1.NW_012011355v1 14482847 0 + 26466322 C e rheMac8.chr20 21377507 0 - 74971481 C e macFas5.chr20 21090112 0 - 78541002 C e colAng1.NW_012123265v1 544334 0 + 3907144 C e manLeu1.NW_012101698v1 6808115 0 - 7209941 C e chlSab2.chr5 58240638 0 + 75399963 C e cerAty1.NW_011999143v1 20810409 0 + 43916225 C e saiBol1.JH378225 6360205 0 + 6628207 C e calJac3.chr20 21548367 0 - 44557958 C a score=242467.000000 s hg38.chr16_GL383557v1_alt 65639 254 + 89672 gccg----ggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaactccatctctactaaaaatacaaaaaat-tagccgggcatggtggcgggcgcctgtagt-ccagctactcgggaggctgaggcaggaggatgacatgaacccggaagacggagcttgcagtgatcggagatcgcaccactgcactccagcct s panTro5.chr16 21497112 254 - 81586097 gccg----ggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaactccatctctactaaaaatacaaaaaat-tagccgggcgtggtggcgggtgcctgtagt-ccagctactcgggaggctgaggcaggaggacgacatgaacccggaaggcggagcttgcagtgatcggagatcgcgccactgcactccagcct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559047 254 - 90481686 gccg----ggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcggacggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaactccatctctactaaaaatacaaaaaat-tagccgggcgtggtggcgggtgcctgtagt-ccagctactcgggaggctgaggcaggaggacgacatgaacccggaaggcggagcttgcagtgatcggagatcgcgccactgcactccagcct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791568 259 + 3010529 GCCACCATCAGgtggtggctcaagcctgtaatcccagcactttgggaggccgaggtgggcggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaat-tagccgggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggaggatgacatgaacccggaaagcggagcttgcagtgatcggagatcgcgccactgcactccagcct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53904718 255 + 163208435 gccg----agcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggtgggaggatcacaaggtcaggagatcaagaccatcctagctaacacggtgaaaccccgtctctactaaatatacaaaaaat-tagccaggcatggtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggaggatgacatgaacccgggaggcggagcttgcagtgagcggagatcacgccactgcactccagcct i nomLeu3.chr2 C 0 I 288 s otoGar3.GL873566 13724961 180 + 13852661 ------gtagggcactggccc---catata-------------------ctgagggtggcgggt-------------------------------------------------ttgcaacaaaacataaacaaaacatagccaggcattgtggcaggtgcctatagtcccagctactcgggaggctgaggcaagagaatcacctaagcccaggagttggaggttgctgtaagctgtga---cgtcatggcactctaccaa i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e macNem1.NW_012011355v1 14482847 0 + 26466322 C e rheMac8.chr20 21377507 0 - 74971481 C e macFas5.chr20 21090112 0 - 78541002 C e colAng1.NW_012123265v1 544334 0 + 3907144 C e manLeu1.NW_012101698v1 6808115 0 - 7209941 C e chlSab2.chr5 58240638 0 + 75399963 C e cerAty1.NW_011999143v1 20810409 0 + 43916225 C e saiBol1.JH378225 6360205 0 + 6628207 C e calJac3.chr20 21548367 0 - 44557958 C a score=35282.000000 s hg38.chr16_GL383557v1_alt 65893 45 + 89672 gggcgacagagcgagactctgtctcaaaaaaaaaaaaaaa-----------aaaac-- s panTro5.chr16 21497366 40 - 81586097 gggcgacagagcgagactctgtctcaaaaaaaaaaaaaaa------------------ i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559301 38 - 90481686 gggcgacagagcgagactctgtctcaaaaaaaaaaaaa-------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791827 44 + 3010529 gggtgacagagcgagactctgtctcaaaaaaaaaaaaaaa-----------aaaa--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905261 44 + 163208435 gggcgacggagcgagactccatttcaaaaaaaaaaaaaaa-----------aaaa--- i nomLeu3.chr2 I 288 C 0 s otoGar3.GL873566 13725141 57 + 13852661 gggtgataaagtgaaactctgtctcttacaaaaaaaaaaCTTCAAATGTATAAAA-CC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e macNem1.NW_012011355v1 14482847 0 + 26466322 C e rheMac8.chr20 21377507 0 - 74971481 C e macFas5.chr20 21090112 0 - 78541002 C e colAng1.NW_012123265v1 544334 0 + 3907144 C e manLeu1.NW_012101698v1 6808115 0 - 7209941 C e chlSab2.chr5 58240638 0 + 75399963 C e cerAty1.NW_011999143v1 20810409 0 + 43916225 C e saiBol1.JH378225 6360205 0 + 6628207 C e calJac3.chr20 21548367 0 - 44557958 C a score=9311.000000 s hg38.chr16_GL383557v1_alt 65938 5 + 89672 ---------------------------------------------------------aaaCT s panTro5.chr16 21497406 5 - 81586097 ---------------------------------------------------------aaaCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559339 5 - 90481686 ---------------------------------------------------------aaaCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791871 5 + 3010529 ---------------------------------------------------------aaaCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905305 5 + 163208435 ---------------------------------------------------------aaCCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377507 5 - 74971481 ---------------------------------------------------------AAACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090112 5 - 78541002 ---------------------------------------------------------AAACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482847 5 + 26466322 ---------------------------------------------------------AAACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810409 5 + 43916225 ---------------------------------------------------------AAACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240638 5 + 75399963 ---------------------------------------------------------AAACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808115 5 - 7209941 ---------------------------------------------------------AAACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544334 5 + 3907144 ---------------------------------------------------------AAACT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13725198 62 + 13852661 AAAATGAGAGATTTCCTTTTTTGGATAGTGTATGTGTGTCCATATGTGAATGTAAAAAAACA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80479427 281 + 88915250 I e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e saiBol1.JH378225 6360205 0 + 6628207 C e calJac3.chr20 21548367 0 - 44557958 C a score=49119.000000 s hg38.chr16_GL383557v1_alt 65943 7 + 89672 GACCATC s panTro5.chr16 21497411 7 - 81586097 GACCATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559344 7 - 90481686 GACCATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791876 7 + 3010529 GACCATC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905310 7 + 163208435 GACCATC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377512 7 - 74971481 GACCATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090117 7 - 78541002 GACCATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482852 7 + 26466322 GACCATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810414 7 + 43916225 GACCATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240643 7 + 75399963 GACCATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808120 7 - 7209941 GACCATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544339 7 + 3907144 GACCATC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13725260 7 + 13852661 GCTCATC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80479708 7 + 88915250 AACTATT i canFam3.chr5 I 281 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e saiBol1.JH378225 6360205 0 + 6628207 C e calJac3.chr20 21548367 0 - 44557958 C a score=46741.000000 s hg38.chr16_GL383557v1_alt 65950 5 + 89672 AAAGC s panTro5.chr16 21497418 5 - 81586097 AAAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559351 5 - 90481686 AAAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791883 5 + 3010529 AAAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905317 5 + 163208435 AAAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377519 5 - 74971481 AAAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090124 5 - 78541002 AAAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482859 5 + 26466322 AAAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810421 5 + 43916225 AAAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240650 5 + 75399963 AAAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808127 5 - 7209941 AAAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544346 5 + 3907144 AAAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548367 5 - 44557958 AAAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360205 5 + 6628207 AAAAC i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13725267 5 + 13852661 AAAGT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80479715 5 + 88915250 AAAGT i canFam3.chr5 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e mm10.chr8 22482658 326 - 129401213 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=910728.000000 s hg38.chr16_GL383557v1_alt 65955 101 + 89672 AGTAAGCATCATTtgcctagcactctacttaaatgtgcttcctggattacatttaatcttcccaacagctcagtgaggtagatat-taacatctccaatttt s panTro5.chr16 21497423 101 - 81586097 AGTAAGCATCATTtgcctagcagtctacttaaatgtgcttcctggattacatttaatcttcccaacagctcagtgaggtagatat-taacatctccaatttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559356 101 - 90481686 AGTAAGCATCATTtgcctagcagtctacttaaatgtgcttcctggattacatttaatcttcccaacagctcagtgaggtagatat-taacatctccaatttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791888 101 + 3010529 AGTAAGCATCATTtgcctagcagtctacttaaatgtgtttcctggattacatttaatcttcccaacagctcagtgaggtagatat-taacatctccaatttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905322 101 + 163208435 AGTAAGCatcatttgcctagcaggctacttaaatgtgcttcctggattacatttaatcttcccaacagctcagtgaagtagatat-taacatctccaatttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377524 101 - 74971481 AGTAAGCATCATTTGCCTAGCAGTCTACTTAAATGTGCTTCCCAGATGAcatttaatctttccaacagctcacggaggtagatat-tatcatctccaatttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090129 101 - 78541002 AGTAAGCATcatttgcctagcagtctacttaaatgtgcttcccagatgacatttaatctttccaacagctcacggaggtagatat-tatcatctccaatttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482864 101 + 26466322 AGTAAGCATCATTTGCCTAGCAGTCTACTTAAATGTGCTTCCCAGATGAcatttaatctttccaacagctcacggaggtagatat-tatcatctccaatttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810426 101 + 43916225 AGTAAGCATcatttgcctagcagtctacttaaatgtgcttcccagatgacatttaatctttccaacagctcacggaggtagatat-tatcatctccaatttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240655 101 + 75399963 AGTAAGCATcatttgcctagcagtctacttaaatgtgcttcccagatgacatttaatctttccaacagctcagggaggtagatat-tatcatctccaatttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808132 101 - 7209941 AGTAAGCATCATTTGCCTAGCAGTCTACTTAAATGTGCTTCCCAGATGAcatttaatctttccaacagctcacggaggtagatat-tatcatctccaatttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544351 101 + 3907144 AGTAAGCATcatttgcctagcagtctacttaaatgtgcttcccagatgacatttaatcgttccaatagctcagggaggtagatat-tatcatctccaatttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548372 87 - 44557958 AGTAAGCATCGTTTGCCTAGCAGTCTACTTAAATGTGCTTCCAAAATTACATTTAAT-----------CTCAGTGAGGTAGATAT----AATCTCCAATTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360210 98 + 6628207 AGTAAGCATcatttgcctagcagtctacttaaatgtgcttccaaaattacatttaatctttccaacagctcagtgaggtagatat----catcgccaatttt i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13725272 101 + 13852661 AGTAAGCATCACTTGTCTAACAGTCACTTTAAATGTGCTTCCTAGATCACATTAAAACTTTCCTATGGCTCAGTGAGGCAGACATTTATCACCCTAAAttt- i otoGar3.GL873566 C 0 I 2427 s mm10.chr8 22482984 80 - 129401213 AGGAAGCATCGTTTGCCTAGCAGGCTAACCAA--GTGCTTCCCAGAC-ATggtgagtct-----------------ggctgatgc-tctcatctccagttt- i mm10.chr8 I 326 C 0 s canFam3.chr5 80479720 97 + 88915250 AGCAAGCATCAGTTGCCCAGCAATCTACTTATATGTGCTACTCAGACCATACtttatttttccaacagctcaatgagagaggtat----tatgcccatttt- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=62483.000000 s hg38.chr16_GL383557v1_alt 66056 7 + 89672 acagat--g s panTro5.chr16 21497524 7 - 81586097 acagat--g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559457 7 - 90481686 acagat--g i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791989 7 + 3010529 acagat--g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905423 7 + 163208435 acagat--g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377625 7 - 74971481 acggat--g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090230 7 - 78541002 acggat--g i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482965 7 + 26466322 acggat--g i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810527 7 + 43916225 acggat--g i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240756 7 + 75399963 acagat--g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808233 7 - 7209941 acggat--g i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 544452 7 + 3907144 acagat--g i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548459 7 - 44557958 ACAGAT--A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360308 7 + 6628207 acagat--a i saiBol1.JH378225 C 0 C 0 s mm10.chr8 22483064 7 - 129401213 acagat--g i mm10.chr8 C 0 C 0 s canFam3.chr5 80479817 9 + 88915250 acagatcag i canFam3.chr5 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e dasNov3.JH569970 934335 120 + 1009443 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=383281.000000 s hg38.chr16_GL383557v1_alt 66063 75 + 89672 aATTATTGATAACTTCCTAATATAATTATTGATAACTTCCTAATAT--ATT--------------CCGCAGCCCAGGTTTTTT-------GTTTTTTT s panTro5.chr16 21497531 75 - 81586097 aATTATTGATAACTTCCTAATATAATTATTGATAACTTCCTAATAT--ATT--------------CCGCAGCCCAGGTTTTTT-------TTTTTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559464 73 - 90481686 aATTATTGATAACTTCCTAATATAATTATTGATAACTTCCTAATAT--ATT--------------CCGCAGCCCAGGTTTTT---------TTTTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 791996 74 + 3010529 aATTATTGATAACTTCCTAATATAATTATTGATAACTTCCTAATAT--ATT--------------CCACAGCCCAGGTTTTTT--------TTTTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905430 79 + 163208435 aATTATTGATAACTTCCTAATATAATTATTGATAACTTCCTAATAT--ATT--------------CTGCAGCCCAGGtttttttttt---tttttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377632 77 - 74971481 aATTATTGATAACTCCCTAATATAATTATT----ATTTCCTAATGT--ATT--------------CTACAGCCCAGGTGTTTTTGTTTT-TTTTTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090237 78 - 78541002 aATTATTGATAACTCCCTAATATAATTATT----ATTTCCTAATGT--ATT--------------CTACAGCCCAGGTGttttttttttctttttttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14482972 78 + 26466322 aATTATTGATAACTCCCTAATATAATTATT----ATTTCCTAATGT--ATT--------------CTACAGCCCAGGTGttttttttttctttttttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810534 78 + 43916225 aATTATTGATAACTCCCTAATATAATTATT----ATTTCCTAATGT--ATT--------------CTATAGCCCAGGttttttttttttctttttttA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240763 77 + 75399963 aATTATTGATAACTCCCTAATATAATTATT----ATTTCCTAATGT--ATT--------------CTACAGCCCAGGtttttttttttt-tttttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808240 77 - 7209941 aATTATTGATAACTCCCTAATATAATTATT----ATTTCCTAATGT--ATT--------------CTACAGCCCAGGtttttttttttt-tctttttt i manLeu1.NW_012101698v1 C 0 I 2 s colAng1.NW_012123265v1 544459 81 + 3907144 aATTATTGATAACTCCCTAATATAATTATTGATAATTTCCTAATGT--ATT--------------CTACAGCCCAGGTTTTTGCTTTTT-TTTTTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548466 60 - 44557958 AAG--------AC------ATAGAATAATTGATAACTTCCTAATGT--GTT--------------CTACAGTCAAGG-TTTTT-------GTTTTTTT i calJac3.chr20 C 0 I 185 s saiBol1.JH378225 6360315 61 + 6628207 aAT--------AC------ATAGAATAATTGATAGCTTCCTAATGT--GTT--------------CTGCAGCCAAGGtttttt-------gtttttct i saiBol1.JH378225 C 0 I 491 s mm10.chr8 22483071 50 - 129401213 ag-----gat---------acACCAGCATTGATGAGT---TAATGT--GTT--------------CTATAGCCCAAGTATTTT--------------- i mm10.chr8 C 0 C 0 s canFam3.chr5 80479826 68 + 88915250 gaTCATCGTC-------------AAGTACTGATCATTTCACAATGT--ATTCCATTTCACAATAGCTATAACTCAGTTATTTT--------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934455 47 + 1009443 -----------------------aagtatggaTAATTTTATAAGGTGAGTT--------------CTATAGCCCAAGTTATTGT-------------- i dasNov3.JH569970 I 120 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e aotNan1.NW_018500622v1 9297981 472 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=515008.000000 s hg38.chr16_GL383557v1_alt 66138 59 + 89672 AAAGATCTCCTTAT----AATCACAA---TCTCCTTACAAATTGGTATAGAAAAAA----G---TAGATTAGG s panTro5.chr16 21497606 59 - 81586097 TAAGATCTCCTTAT----AATCACAA---TCTCCTTACAAATTGGTATAGAAAAAA----G---TAGATTAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559537 59 - 90481686 AAGTATCTCCTTAT----AATCACAA---TCTCCTTACAAATTGGTATAGAAAAAA----G---TAGATTAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792070 59 + 3010529 AAAGATCTCCTTAT----AATCACAA---TCTCCTTACAAACTGGTATAGAAAAAA----G---TAGATTAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905509 59 + 163208435 AAAGATCTCCTTAT----AATCACAA---TCTCCTTACAAACTGGTATACAAAAAA----G---TAGATTAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377709 59 - 74971481 AAAGATCTCCTTAT----AATTACAA---ACTCCTTATAAATTGGTATAGAAAAAA----G---TATATTAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090315 59 - 78541002 AAAGATCTCCTTAT----AATTACAA---ACTCCTTATAAATTGGTATAGAAAAAA----G---TAGATTAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483050 59 + 26466322 AAAGATCTCCGTAT----AATTACAA---ACTCCTTATAAATTGGTATAGAAAAAA----G---TAGATTAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810612 59 + 43916225 AAAGATCTCCTTAT----AATTACAA---TCTCCTTATAAATTGGTATAGAAAAAA----G---TAGATTAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240840 59 + 75399963 AAAGATCTCCTTAT----AATTACAA---TCTCCGTATAAATTGGCATAGAAAAAA----G---TAGATTAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808319 59 - 7209941 AAAGATCTCCTTAT----AATTACAA---TCTCCTTATAAATTGGTATAGAAAAAA----G---TAGATCAGG i manLeu1.NW_012101698v1 I 2 C 0 s colAng1.NW_012123265v1 544540 59 + 3907144 AAAGATCTCCTTAT----AATTACAA---TCTCCTTACAAACTGGTATAGAAAAAA----G---TAGATTAGg i colAng1.NW_012123265v1 C 0 M 3944 s calJac3.chr20 21548711 59 - 44557958 AAAAATCTCTTTAT----AATTACAA---TCTCCTTACAAATTGGTAAGGAAAAAG----G---CAGATTTGG i calJac3.chr20 I 185 C 0 s saiBol1.JH378225 6360867 51 + 6628207 AAAAATCTATTTAT---------------TCTCCTTACAAATTGGTAAGGAAAAAG----G---CAGATTTGG i saiBol1.JH378225 I 491 C 0 s aotNan1.NW_018500622v1 9298453 59 - 10531588 AAAAATCTCTTTAT----AATTACAA---TCTCCTTACAAATTGGTAAGGAAAAAG----G---CAGATTTGG i aotNan1.NW_018500622v1 I 472 C 0 s mm10.chr8 22483121 49 - 129401213 ------------------AAACAGTG---CTTCTTCCTAACTTGGCATAAAAAAACTCCTG---TAGACTTAC i mm10.chr8 C 0 I 2 s canFam3.chr5 80479894 40 + 88915250 AAAGATTTTCTTAC----AAT--------------------TTGGTATAGAAAAAA----G---CAG--TAGG i canFam3.chr5 C 0 I 5 s dasNov3.JH569970 934502 69 + 1009443 AAAGATCTTCTCCTTACAAATTAAAATCTTCTCCTTCCAACTTAGTAAAGAAAAAA----GCACTAGACCAAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=485553.000000 s hg38.chr16_GL383557v1_alt 66197 58 + 89672 TTCTAATTTTGGCTGAGA-TTaggta-cctgatctta--------------ttagggcttgatttcctcatcgg s panTro5.chr16 21497665 58 - 81586097 TTCTAATTTTGGCTGAGA-TTaggta-cctgatctta--------------ttagggcttgatttcctcatcgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559596 58 - 90481686 TTCTAATTTTGGCTGAGA-TTAGGTA-CCTGATCTTA--------------TTAGGGCTTGATTTCCTCATCGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792129 58 + 3010529 TTCTAATTTTGGCTGAGA-TTaggta-cctgatctta--------------ttagggcttgatttcctcatcgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905568 58 + 163208435 TTCTAATTTTGGCTGAGA-TTACGTA-TCTGatctta--------------ttagggcttgatttcctcatcgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377768 58 - 74971481 TTCTAATTTTGGCTGAGA-TTAGGTA-CCTGATCTTA--------------CTAGTGCTTGATTTCCTCATCGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090374 58 - 78541002 TTCTAATTTTGGCTGAGA-TTAGGTA-CCTGATCTTA--------------CTAGTGCTTGATTTCCTCATCGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483109 58 + 26466322 TTCTAATTTTGGCTGAGA-TTAGGTA-CCTGATCTTA--------------CTAGTGCTTGATTTCCTCATCGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810671 58 + 43916225 TTCTAATTTTGGCTGAGA-TTAGGTA-CCTGATCTTA--------------CTAGTGCTTGATTTCCTCATCGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240899 58 + 75399963 TTCTAATTTTGGCTGAGA-TTAGGTA-CCTGATCTTA--------------CTAGTGCTTGATTTCCTCATAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808378 58 - 7209941 TTCTAATTTTGGCTGAGA-TTaggta-cctgatctca--------------ctagtgcttgatttcctcatcgg i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21548770 57 - 44557958 TTCTAACTTTGGCTGAGA-TTaggta--cttatctta--------------ctagggcttgatttcctcatctg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360918 57 + 6628207 TTCTAATTTTGGCTGAGA-TTAGGTA--CTAatctta--------------ctagggctcgatttcctcatctg i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298512 57 - 10531588 TTCTAATTTTGGCTGAGA-TTAGGTA--ATGatctta--------------ctagggcttgatttcctcatctg i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22483172 57 - 129401213 TTCTCACTCTGGCTGAGATTTAGACACCCCTATTTTA--------------GTAAGGTCTGTTTTCCTTAT--- i mm10.chr8 I 2 C 0 s canFam3.chr5 80479939 45 + 88915250 CACTCATTTTGGCTACTC-TTTGCAA----------------------------TGGCCTAATTTCTGTATCTG i canFam3.chr5 I 5 C 0 s dasNov3.JH569970 934571 71 + 1009443 CACTAGTTTTGGCTGAGA-TTAG-TA-CGTGATCTTAGTTAAACCCCTTCGCTATGGCCTGATTAACTTATCTA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e colAng1.NW_012123265v1 544599 3944 + 3907144 M e otoGar3.GL873566 13725373 2427 + 13852661 I a score=793126.000000 s hg38.chr16_GL383557v1_alt 66255 76 + 89672 caagcgtaaaggtgaatgatacaa-tcttttagtcactttcaactctcaaaatcttattccatCCCATATCCAGTTT s panTro5.chr16 21497723 76 - 81586097 caagcgtaaaggtgaatgatacaa-tcttttagtcactttcaactctcaaaatcttattccatCCCATATCCAGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559654 76 - 90481686 CAAGCGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATATCCAGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792187 76 + 3010529 caagcgtaaaggtgaatgatacaa-tctttcagtcactttcaactctcaaaatcttattccatCCCATATCCAGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905626 75 + 163208435 -aagggtaaaggtgaatgatacaa-tcttttagtcactttcaactctcaaaatctTATTCCAACCCATATCCAGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377826 76 - 74971481 CAAGGGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATACCCAGTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090432 76 - 78541002 CAAGGGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATACCCAGTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483167 76 + 26466322 CAAGGGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATACCCAGTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810729 76 + 43916225 CAAGGGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATACCCAGTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58240957 76 + 75399963 CAAGGGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATATCCAGTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808436 76 - 7209941 caagggtaaaggtgaatgatacaa-tcttttagtcactttcaactctcaaaatcttattccatCCCATACCCAGTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548592 76 + 3907144 CAAGGGTAAAGGTGAATGATACAA-TCTTTTAGTCACTTTCAACTCTCAAAATCTTATTCCATCCCATATCCAGTTT i colAng1.NW_012123265v1 M 3944 C 0 s calJac3.chr20 21548827 76 - 44557958 caagggtaaaggtgaataatacaa-tcttttagtcactttcaactctcaaaattttataccattccatATCGAGTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6360975 76 + 6628207 caagggtaaaggtgaataatacaa-tcttttagtcactttcaactctcaaaattttataccattccatATCGAGTTT i saiBol1.JH378225 C 0 I 321 s aotNan1.NW_018500622v1 9298569 76 - 10531588 caagggtaaaggtgaataacacaa-tcttttagtcactttcaactctcaaaattttataccattccatATCAAGTTT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22483229 61 - 129401213 -------GAAGGTAAGCCAT-CCA-TTTTTTAGTTTATTT------TCAAGATTTTATTACAT-CTGTAACTAATTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80479984 76 + 88915250 CCAAAGTGAAGGCAAATTTCATGATTTTTTTAGTCACTCCCAACT-TCAAGGTCTTATTCCATCCCATATCCAGTCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934642 70 + 1009443 CAAAAATGAAATTG--CTATGTAA---TGTTAGCCACTTC--ATTTTTTAAGTCTTATCCCAACCTGTATTCAGTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=456818.000000 s hg38.chr16_GL383557v1_alt 66331 41 + 89672 AATACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG s panTro5.chr16 21497799 41 - 81586097 AATACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559730 41 - 90481686 AATACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792263 41 + 3010529 AATACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905701 41 + 163208435 AATACCCAAGCCCATTTCATCTCTCCTCTAAAATAATCAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377902 41 - 74971481 AACACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090508 41 - 78541002 AACACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483243 41 + 26466322 AACACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810805 41 + 43916225 AACACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241033 41 + 75399963 AACACCCAAGCCCATGTCATCTTTCCTCTAAAACAATCAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808512 41 - 7209941 AACACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548668 41 + 3907144 GACACCCAAGCCCATGTCATCTCTCCTCTAAAACAATCAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548903 41 - 44557958 AACACCCAAGCCCATGTCATCTCTGCTCTAGCATAATCAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361372 41 + 6628207 aaCACCCAAGCCCATGTCATCTCTGCTCTAAAATAATCAGA i saiBol1.JH378225 I 321 C 0 s aotNan1.NW_018500622v1 9298645 41 - 10531588 AACACCCAAGCCCATGTCATCTCTGCTCTAAAATAATCAGG i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22483290 37 - 129401213 GGTACCTGGGTCCATGTCATCTCTGGTTTA----CATCAGC i mm10.chr8 C 0 C 0 s canFam3.chr5 80480060 41 + 88915250 AACACCTGGGTCCATATCATCTCTAGTCTAAAATAACGAgg i canFam3.chr5 C 0 I 214 s dasNov3.JH569970 934712 36 + 1009443 AACA-CTAAGTCCATGTCATCTCTA----AAAACAATCAGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=126642.000000 s hg38.chr16_GL383557v1_alt 66372 12 + 89672 AAAATGAGTACT s panTro5.chr16 21497840 12 - 81586097 AAAATGAGTACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559771 12 - 90481686 AAAATGAGTACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792304 12 + 3010529 AAAATGAGTACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905742 12 + 163208435 AAAATGAGTACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377943 12 - 74971481 AAAATGAGTACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090549 12 - 78541002 AAAATGAGTACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483284 12 + 26466322 AAAATGAGTACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810846 12 + 43916225 AAAATGAGTACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241074 12 + 75399963 AAAATGAGTACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808553 12 - 7209941 AAAATGAGTACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548709 12 + 3907144 AAAATGACTACT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548944 12 - 44557958 AAAATGAGTTCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361413 12 + 6628207 AAAATGAGTTCT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298686 12 - 10531588 AAAATGAGTTCT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22483327 8 - 129401213 AGATTG----CT i mm10.chr8 C 0 C 0 s canFam3.chr5 80480315 12 + 88915250 AAAATGAGTACT i canFam3.chr5 I 214 C 0 s dasNov3.JH569970 934748 11 + 1009443 AAAATGAGTAT- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54947421 1030 + 72247402 I e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=48222.000000 s hg38.chr16_GL383557v1_alt 66384 3 + 89672 TCA s panTro5.chr16 21497852 3 - 81586097 TCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559783 3 - 90481686 TCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792316 3 + 3010529 TCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905754 3 + 163208435 TCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377955 3 - 74971481 TCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090561 3 - 78541002 TCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483296 3 + 26466322 TCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810858 3 + 43916225 TCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241086 3 + 75399963 TCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808565 3 - 7209941 TCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548721 3 + 3907144 TCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548956 3 - 44557958 TCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361425 3 + 6628207 TCA i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298698 3 - 10531588 TCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54948451 3 + 72247402 tCA i micMur3.chr20 I 1030 C 0 s mm10.chr8 22483335 3 - 129401213 TCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80480327 3 + 88915250 TCA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934759 3 + 1009443 TCA i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13725373 2427 + 13852661 I a score=145727.000000 s hg38.chr16_GL383557v1_alt 66387 13 + 89672 AAATTCCTCCTCC s panTro5.chr16 21497855 13 - 81586097 AAATTCCTCCTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559786 13 - 90481686 AAATTCCTCCTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792319 13 + 3010529 AAATTCCTCCTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905757 13 + 163208435 AAATTCCTCCTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377958 13 - 74971481 AAACTCCTCCTCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090564 13 - 78541002 AAACTCCTCCTCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483299 13 + 26466322 AAACTCCTCCTCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810861 13 + 43916225 AAACTCCTCCTCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241089 13 + 75399963 AAACTCCTCCTCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808568 13 - 7209941 AAACTCCTCCTCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548724 13 + 3907144 AAACTCCTCCTCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548959 13 - 44557958 AAATTCCTCCCCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361428 9 + 6628207 AAATTCCTC---- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298701 13 - 10531588 AAATTCCTCCTCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54948454 13 + 72247402 AAATTCCTCTACC i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13727800 13 + 13852661 AAATTCCTCTATT i otoGar3.GL873566 I 2427 C 0 s mm10.chr8 22483338 13 - 129401213 GAACTCTTGTATC i mm10.chr8 C 0 C 0 s canFam3.chr5 80480330 11 + 88915250 AAATCCTTCCT-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934762 13 + 1009443 CAATCCCTCCACC i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2954717 748 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=2181692.000000 s hg38.chr16_GL383557v1_alt 66400 167 + 89672 CTCTTGTGATTCTTTACTCTAGAATCTTAGTGCTTCTCCATTTAAATTGCATCCCATCAAACCAATGCATACTGCTGGCCTATGATGAGCCCAGACCG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAAAAAAGCTCC s panTro5.chr16 21497868 167 - 81586097 CTCTTGTGATTCTTTACTCTAGAATCTTAGTGCTTCTCCATTTAAATTGCATCCCATGAAACCAATGCATACTGCTGGCCTATGATGAGCCCAGACCG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAAAAAAGCTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559799 166 - 90481686 CTCTTGTGATTCTTTACTCTAGAATCTTAGTGCTTCTCCATTTAAATTGCATCCCATCAAACCAATGCATACTGCTGGCCTATGATGAGCCCAGACCG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC--AAAAAAAGCTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792332 167 + 3010529 CTCTTGTGACTCTTTACTCTAGAATCTTAGTGCTTCTCCATTTAAATTGCATCCCATCAAACCAATGCATACTGCTGGCCTATGATGAGCCCAGACCG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAAAAAAGCTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905770 168 + 163208435 CTCTTGTGATTCTTTACTCTAGAATCTTAGTGCTTCTCCATTTAAATTGCATCCCATCAAACCAATGCATACTGCTGGCCTATGATGAGCCCAGACAG--GAAACAAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTCAAAAAAAAAGCTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21377971 171 - 74971481 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAATGCATATTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAGAAAGGCTCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090577 171 - 78541002 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAATGCATATTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAGAAAGGCTCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483312 171 + 26466322 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAATGCATATTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACATCTTC-AAAGAAAGGCTCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20810874 171 + 43916225 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAATGCATATTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAGAAAGGCTCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241102 171 + 75399963 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAATGCATATTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAGAAAAGCTCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808581 171 - 7209941 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAATGCATATTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAGAAAGGCTCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548737 171 + 3907144 CTCTTGTGATTCTTTACTCTAGAATCTTAGCACTTCTCCATTTAAACTGCATCCCATCAAACCAAAGCATGCTGCTGGCCTATGATGAGCCCAGATAG--GCAAGGAAGCTTTACTTACTTCACACAGGAGAAAACTACCT-T-ATATCCTCCAACACCTTC-AAAGAAAAGCTCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21548972 166 - 44557958 CTCTTACGATTCTTCACTCTTGAATCTTAGTACTTCTCCATTTAAACTGCATCCCATCAAACCAATGGATAATGCTGGCCTATGATGAACCCAGACAG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T--TCTCCTCCAGCACCTTC-AAAGAAAAGCTCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361437 132 + 6628207 -----------------------------------CTCCATTTAAACTGCATCCCATCAAACCAATGGATACTGCTGGCCTGTGATGAGCCCAGACAG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATCTCCTCCAGCACCTTC-AAAGAAAAGCTCC i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298714 167 - 10531588 CTCTTATGATTCTTCACTCTTGAATCTTAGTACTTCTCCATTTAAACTGCATCCCATCAAACCAATGGATACTGCTGGCCTATGATGAGCCCAGACAG--GCAAGGAAGCT----TTACTTCACACAGGAGAAAACTACCT-T-ATCTCCTCCAGCACCTTC-CAAGAAAAGCTCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54948467 168 + 72247402 CTCTTCTGCTTCTTTACTCTAAAACTTCAGTGCTTCCCCTTTCAAACTGTGCCCCACCAAACCAATGGATACTGCTGGCCTACAGTGAGCCCAGGCTA--TGCATAAAGCT----TTGCTTTATACAGGAGAAAAATACCT-TTATATCCTCTAACACCTTC-AAAGAAAAGTTCC i micMur3.chr20 C 0 I 62 s proCoq1.NW_012152729v1 2955465 168 + 9850184 CTCTTGTGCTTCTTTACTCTAGAACTTCAGTGCTTCCCCATTCAAACTGTGCCCCATCAAACCAATGGATATTGCTGGCCTATAATGAGCCCAGGCTA--TGCATAAAGCT----TTGCTTTACGCAGGACAAAAATATCT-TTATATCCTCCAACACCTTC-AAAGAAAAGTTCC i proCoq1.NW_012152729v1 I 748 I 23 s otoGar3.GL873566 13727813 168 + 13852661 TTCTTGGGCTTCTTTACTCTAAAACTTCAGTGCTTCCCCATTCAAACTGTGTCCCAGCAAACCAATGGACATTGCTGGCCTGTAATGAGCCCAGGCTA--TGCAAAATGCT----TCGCTTTACACAGGATAAAACTATGT-TTATATTCTCTGGCACCTTC-AAAGAAAAGTTTC i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22483351 128 - 129401213 ----------------------ACTCTGTGTTCTTCTCTA---GAACTGCA---CTGTAAGCCAGTGGGTACTGCTTGCCAATGGGCCACCCAG----------GGAAGCC----TCACTT-ACACA-AAGGAACCTGCCTAT-GCATCCTCCACCGTCT---CAGGGGAAGCTCC i mm10.chr8 C 0 C 0 s canFam3.chr5 80480341 156 + 88915250 ------------TTTACTCTATAATCTCAGAGCTTCATCATTC-CATTGTG-CCCATCAAGCCAAAGGATATTACTGGCCTATAAATACCCAAGCTAGATACATGGAAGCT----TTACTTTGCAGAAGAGAAAACTACCTGT-GTATCTTCCACTACATTC-AAACAAAGGCTCC i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 934775 166 + 1009443 TTCCTGTGCCTCTTTACTCTAAAATATCAGTGCTTCACCATT-AAACTGCATCTCATCAAGCCCAGGGATACTGCTAGCCTCT-ATGAGCTCACGAAG--AACTGGCAGCT----TTACCTCACACACAAGAAAAATACTT-TTGTACCTTCCAGCACCTTC-AAAGAAAAGCTCA i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=246071.000000 s hg38.chr16_GL383557v1_alt 66567 29 + 89672 -CCGCAACTGCCCAATATTCCAGC--TTCTAG s panTro5.chr16 21498035 29 - 81586097 -CCGCAACTGCCCAATATTCCAGC--TTCTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559965 29 - 90481686 -CCGCAACTGCCCAATATTCCAGC--TTCTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792499 29 + 3010529 -CCGCAACTGCCCAATATTCCAGC--TTCTAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905938 29 + 163208435 -CCGCAGCTGCCCAATATTCCAGC--TTCTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378142 29 - 74971481 -CTGTAACTGCCTAATATCCCAGC--TTCCAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090748 29 - 78541002 -CTGTAACTGCCTAATATCCCAGC--TTCCAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483483 29 + 26466322 -CTGTAACTGCCTAATATCCCAGC--TTCCAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811045 29 + 43916225 -CTGTAACTGCCTAATATCCCAGC--TTCCAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241273 29 + 75399963 -CTGCAACTGCCTAATATCCCAGC--TTCCAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808752 29 - 7209941 -CTGTAACTGCCTAATATCCCAGC--TTCCAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548908 29 + 3907144 -CTGGAACTGCCCAATATCCCAGC--TTCCAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21549138 29 - 44557958 -CCTCAACTGCCCAATATCCCAGC--TTCCAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361569 29 + 6628207 -CCTCAACTGCTCAATATCCCAGC--TTCCAG i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298881 29 - 10531588 -CCTCAACTGCCCAATATCCCAGC--TTCCAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13727982 22 + 13852661 -CCAAAGTTGTCCATTATCTCAG--------- i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22483479 15 - 129401213 -----------------TCCTAGCTGTTCCAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80480498 23 + 88915250 -CCAAAATTGTCA------TTAGC--TTTTTA i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 934941 29 + 1009443 TTCAAAATTGTC-ATTATCTCAGT--TTCCAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948635 62 + 72247402 I e proCoq1.NW_012152729v1 2955633 23 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=506523.000000 s hg38.chr16_GL383557v1_alt 66596 39 + 89672 GTTACTATCCAGCAGGAAGGGAATAGAAAGCACTGGAAT s panTro5.chr16 21498064 39 - 81586097 GTTACTATCCAGCAGGAAGGGATTAGAAAGCACTGGAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21559994 39 - 90481686 GTTACTATCCAGCAGGAAGGGATTAGAAAGCACTGGAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792528 39 + 3010529 GTTACTATCCAGCAGGAAGGGATTAGAAAGCACTGGAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53905967 39 + 163208435 GTTACTATCCAGCAGGAAGGGATTAGAAAGCACTGGAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378171 39 - 74971481 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090777 39 - 78541002 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483512 39 + 26466322 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811074 39 + 43916225 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241302 39 + 75399963 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808781 39 - 7209941 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548937 39 + 3907144 GTTACTATCCAGCAGGAAGGCATTAGAAAGCACTGGCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21549167 39 - 44557958 GTTACTATCCAGAAGGAAGGGATTAGAAAGCATTGGAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361598 39 + 6628207 GTTACTATCCACAAGGAAGGGATTAGAAAGCACTGGAAT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298910 39 - 10531588 GTTACTATCCAGAAGGAAGGGATTAGAAAGCACTGGAAT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2955656 39 + 9850184 GTTACAATGTGGCAGCAAGAAATTAGAAAACACCAGAAC i proCoq1.NW_012152729v1 I 23 C 0 s otoGar3.GL873566 13728004 38 + 13852661 GTTATAATCTGGTAGCAAG-AATTAGAATACACCAGAAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22483494 35 - 129401213 -TGAGTGT--AGCAG-AGGGAACTGGAAAGCACTGGAGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80480521 39 + 88915250 GTTACTATCCAACAGAAAGGAATTAGAAAACATTGGAAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 934970 38 + 1009443 ATTACTATCCAGCAAGAAGGAATTAGATAGCACTGAAT- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948635 62 + 72247402 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=2333005.000000 s hg38.chr16_GL383557v1_alt 66635 139 + 89672 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATAGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAACAGACACAAGTGGCAACTCT s panTro5.chr16 21498103 139 - 81586097 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATAGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAAAAGACACAAGTGGCAACTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560033 139 - 90481686 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATAGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAACAGACACAAGTGGCAACTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792567 139 + 3010529 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATAGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAACAGACACAAGTGGCAACTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906006 139 + 163208435 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAACGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACACACACAAGGGGCAACTCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378210 139 - 74971481 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTAGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACAAACACAAGGGGCAACTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090816 139 - 78541002 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTAGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACAAACACAAGGGGCAACTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483551 139 + 26466322 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTAGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACAAACACAAGGGGCAACTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811113 139 + 43916225 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACAAACACAAGGGGCAACTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241341 139 + 75399963 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACAAACACAAGGGGCAACTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808820 139 - 7209941 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACGAATAACAAACACAAGGGGCAACTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 548976 139 + 3907144 CTCCCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAACAAACACAAGGGGCAACTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21549206 132 - 44557958 CTCCCTTACCTGCTGGTCAGAATAAGCGATGACAAGGTTGTTGGTATTGGGGGCAACGGCCATAGCAGTCACCGGAAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAACACACA-------CACCTCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361637 132 + 6628207 CTCCCTTACCTGCTGGTCAGAATGAGCGATGACAAGGTTGTTGGCATTAGGGGCAATGGCCATAGCAGTCACTGGGAAATTGTAAGCAGGCACCGTGCAGTGAAGCTGAGAACAAATAACAGACA-------CAATTCT i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9298949 132 - 10531588 CTCCCTTACCTGCTGGTCAGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCAATGGCCATAGCAGTCACTGGGAAATTATAAGCAGGCACCGTGCAGTGAAGCTGGGAACAAATAACAGACA-------CAACTCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54948697 139 + 72247402 CTCTCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTACTGGGGGCAATGGCCAGAGCAGTCACTGGGAAGTTGTAAGCAGGCACTGTGCAGTGAAGCTGGGAACAAATAACAGACACAAGAGGCAACTCT i micMur3.chr20 I 62 I 1842 s proCoq1.NW_012152729v1 2955695 139 + 9850184 CTCTCTTACCTGCTGGTCCGAATGAGCGATGACAAGGTTGTTGGTATCGGGGGCAATGGCCAGAGCAGTCACTGGGAAGTTGTAGGCAGGCACTGTGCAGTGAAGCTGGGAACAAATAACAGACACAAGAGGAAACTCT i proCoq1.NW_012152729v1 C 0 I 1555 s otoGar3.GL873566 13728042 136 + 13852661 CTCTCTTACCTGCTGGTCTGAATGAGCAAGGACAAGGTTGTTGGTATTGGGGGCAATGGCCAGAGCAGTCACTGGGAAATTGTATGCAGGCACTGTGCAGTGAAGCTGTAAACAAAT---AGACACAAGAGCTGACTCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22483529 125 - 129401213 --CACTTACCTGCTGGTCAGAATGAGCAATGACCAGGTTGTTGGTATTGGGGGCGATGGCCAGAGCGGTCACTGGGAAGTTGTAAGCAGGCACTGTGCAGTGAAGCTGGGAAAAGAC----------AGGGAAGACT-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80480560 136 + 88915250 --CTCTTACCTGCTGGTCAGAATGAGCGATGACAAGGTTGTTGGTATTGGGGGCGATGGCCAGAGCAGTCACAGGGAAATTATAGGAAGGTACTGTGCAGTGAAGCTG-GAACAAATAACAGATACAAAAGACAATTCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 935008 138 + 1009443 CTCTCTTACCTGCTGGTCGGAATGAGCGATGACAAGGTTATTGGTATTGGGGGCGATGGCCAGGGCAGTCACAGGGAAATTGTAAGCAGGGACTGTGCAGTGAGGCTGGGAACAAGTAACAGAC-CAAGACAAAATTCT i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=465483.000000 s hg38.chr16_GL383557v1_alt 66774 44 + 89672 AAGTGACACTTTTCCTCAGCAAAGATTGAATGGTCTAGGTCAGG-- s panTro5.chr16 21498242 44 - 81586097 AAGTGACACTTTTCCTCAGCAAAGATTGAATGGTCTAGGTTAGG-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560172 44 - 90481686 AAGTAACACTTTTCCTCAGCAAAGATTGAATGGTCTAGGTCAGG-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792706 44 + 3010529 AAGTGACACTTTTCCTCAGCAAAGATTGAATGGTCTAGGTCAGG-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906145 44 + 163208435 AAGTGACACTTTTTCGCAGCAAAGATTGAATGGTCTAGGTCGGG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378349 44 - 74971481 AAGTGACACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21090955 44 - 78541002 AAGTGACACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483690 44 + 26466322 AAGTGACACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811252 44 + 43916225 AAGTGATACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241480 44 + 75399963 AAGTGACACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6808959 44 - 7209941 AAGTGACACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 549115 44 + 3907144 AAGTGACACTTTTCCTCAGCAAAGACTGAATGGTCTAGGTCAGG-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21549338 44 - 44557958 AAGTGACACTTTTCCTCAGCAAAGACTGAGTTGTCTAGGTCAGG-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361769 44 + 6628207 AAGTGACACTTGTCCTCAGCAAAGACTGAATTGTCTAGGTCAGG-- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9299081 44 - 10531588 AAGTGACACTTTTCCTCAGCAAAGACTGAATTGTCTACGTCAGC-- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13728178 37 + 13852661 -TATCATACCTTC------AAAAGACTGAAAGGTCTAGATCAGT-- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22483654 44 - 129401213 ATAGGACACCGTCCTTCAAGAAAGGTTACGCGAGCTGTGCAAGG-- i mm10.chr8 C 0 I 1093 s canFam3.chr5 80480696 41 + 88915250 ---ACATACCTTCCCTCAGGGAAGGCTGGATGCTCTAGGTCTGT-- i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 935146 46 + 1009443 GTAAGATGCCTTCCCATAAGAAAAACTGGACAGTCAAGGTCATTTG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=825645.000000 s hg38.chr16_GL383557v1_alt 66818 88 + 89672 GGTTTAAATACTGCTCCTCATAATTC--AAAAGGGTTCTAGGGAAGTT--CCAAAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt s panTro5.chr16 21498286 88 - 81586097 GGTTTAAATACTGCTCCTCATAATTC--AAAAGGGTTCTAGGGAAGTT--CCAAAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560216 88 - 90481686 GGTTTAAATACTGCTCCTCATAATTC--AAAAGGGTTCTAGGGAAGTT--CCAAAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792750 88 + 3010529 GGTTTAAATACTGCTCCTCATAATTC--AAAAGGGTTCTAGGGAAGTT--CCAAAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906189 88 + 163208435 GGTTTAAATAGTGCTCCTCATAATTC--AAAAGGGTTCTAGGGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378393 88 - 74971481 GGTTTAAATAGTGCTCCTCAGAACTC--AAAAGGGTTCTAGAGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i rheMac8.chr20 C 0 I 5 s macFas5.chr20 21090999 88 - 78541002 GGTTTAAATAGTGCTCCTCAGAACTC--AAAAGGGTTCTAGAGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i macFas5.chr20 C 0 I 5 s macNem1.NW_012011355v1 14483734 88 + 26466322 GGTTTAAATAGTGCTCCTCAGAACTC--AAAAGGGTTCTAGGGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i macNem1.NW_012011355v1 C 0 I 5 s cerAty1.NW_011999143v1 20811296 88 + 43916225 GGTTTAAATAGTGCTCCTCAGAACTC--AAAAGGGTTCTAGGGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i cerAty1.NW_011999143v1 C 0 I 5 s chlSab2.chr5 58241524 88 + 75399963 GGTTTAAATAGTGCTCCTCAGAACTC--AAAAGGGTTCTAGGGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i chlSab2.chr5 C 0 I 5 s manLeu1.NW_012101698v1 6809003 88 - 7209941 GGTTTAAATACTGCTCCTCAGAACTC--AAAAGGGTTCTAGGGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCAttt i manLeu1.NW_012101698v1 C 0 I 5 s colAng1.NW_012123265v1 549159 88 + 3907144 GGTTTAAATAGTGCTCCTCAGAACTC--AAAAGGGTTCTAGGGAAGTT--CCATAAATTTCAGGCATTTCCCCAACCAATGAACTTTCATTT i colAng1.NW_012123265v1 C 0 M 1684 s calJac3.chr20 21549382 90 - 44557958 AGTTTAAGTAGTGCTCCTTGGAACTC--AAAAGGGTTCTATGAAAGTTCCCCCAAAATTTCAGGCATTTCCCCAACCAATGAACTTTAAttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361813 89 + 6628207 AGTTTAAGTAGTGCTCCTTGGAACTC--AAAAGGGTTCTCTGGAAGTT-CCCAAAAATTTCAGGCACTTCCCCAACCAATGAACTTTAAttt i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9299125 89 - 10531588 AGTTTAAGTAGTGCTCCTTGGAACTC--AAAAGGGTTCTATGGAAATT-CCCAAAAATTTCAGGCAGTTCCCCAACCAATGAACTTTAAttt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13728215 11 + 13852661 AGTTT--------------GTAAtt------------------------------------------------------------------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80480738 89 + 88915250 GTTTTAAATAATGTTCCTTAGAACTCAAAAAAAAGTTCTATGGAAGCT-CCCCAAAACATCAGGCAGTATCTC--CAAATAAACCTAAATTT i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 935192 89 + 1009443 TTTTTAAATAGTGTTCTTTTTAACTC--TTAAGGGGTCTGTGGAAGTT-CCAATAAATTTCAGGTATTTCCTCAAACAATGAACTTTCTTGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I a score=39941.000000 s hg38.chr16_GL383557v1_alt 66906 4 + 89672 cttt s panTro5.chr16 21498374 4 - 81586097 cttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560304 4 - 90481686 cttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792838 4 + 3010529 cttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906277 4 + 163208435 cttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378486 4 - 74971481 cttt i rheMac8.chr20 I 5 C 0 s macFas5.chr20 21091092 4 - 78541002 cttt i macFas5.chr20 I 5 C 0 s macNem1.NW_012011355v1 14483827 4 + 26466322 cttt i macNem1.NW_012011355v1 I 5 C 0 s cerAty1.NW_011999143v1 20811389 4 + 43916225 cttt i cerAty1.NW_011999143v1 I 5 C 0 s chlSab2.chr5 58241617 4 + 75399963 cttt i chlSab2.chr5 I 5 C 0 s manLeu1.NW_012101698v1 6809096 4 - 7209941 cttt i manLeu1.NW_012101698v1 I 5 C 0 s calJac3.chr20 21549472 4 - 44557958 cttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361902 4 + 6628207 cttt i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9299214 4 - 10531588 cttt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13728226 4 + 13852661 ttat i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80480827 4 + 88915250 CATT i canFam3.chr5 C 0 I 4 s dasNov3.JH569970 935281 4 + 1009443 TTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M a score=-17374.000000 s hg38.chr16_GL383557v1_alt 66910 10 + 89672 --ttct-----tctctt----- s panTro5.chr16 21498378 3 - 81586097 --ttc----------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560308 3 - 90481686 --ttc----------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792842 3 + 3010529 --ttt----------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906281 15 + 163208435 --ttctttttctttttc----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378490 3 - 74971481 --ttc----------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091096 3 - 78541002 --ttc----------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483831 3 + 26466322 --ttc----------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811393 3 + 43916225 --ttc----------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241621 3 + 75399963 --ttc----------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809100 3 - 7209941 --ttc----------------- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549476 3 - 44557958 --tct----------------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6361906 3 + 6628207 --act----------------- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9299218 3 - 10531588 --tct----------------- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13728230 3 + 13852661 --tta----------------- i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 935285 10 + 1009443 AATTC------------CTACT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M a score=734277.000000 s hg38.chr16_GL383557v1_alt 66920 108 + 89672 ttttttttttttg-agat-ggagtttcgctcttgtcacccaggctggagtgcagtggcgtgataatcag--ctcactgcaacctctgcctcccaggttcaagtgattctcct s panTro5.chr16 21498381 107 - 81586097 -tttttttttttg-agat-ggagtttcgctcttgtcacccaggctggagtgcagtggcgtgataatcag--ctcactgcaacctctgcctcccaggttcaagtgattctcct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560311 108 - 90481686 -tttttttttttgtagat-ggagtttcgctcttgtcacccaggctggagtgcagtggcgtgataatcag--ctcactgcaacctctgcctcccaggttcaagtgattctcct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792845 100 + 3010529 --------ttttg-agat-ggagtttcgctcttgtcacccaggctggagtgcagtggcgtgatcatcag--ctcactgcaacctctgcctcccgggttcaagtgattctcct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906296 108 + 163208435 tttttttttttta-agat-ggagtttcgctcttgtcacccaggctggagtgcagtggagcgataattag--ctcactgcaacctccacctcccgggttcaagtgattctcct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378493 107 - 74971481 ttttttttttttg-agat-ggagtttcactcttgtcaccccggctcgagtgcagtggtgcgatc-tcgg--ctcactgcaacctccgcctcttgggttaaagtgattctcct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091099 107 - 78541002 ttttttttttttg-agat-ggagtttcactcttgtcaccccggctcgagtgcagtggtgcgatc-tcgg--ctcactgcaacctccgcctcctgggttaaagtgattctcct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483834 106 + 26466322 -tttttttttttg-agat-ggagtttcactcttgtcaccccggctcgagtgcagtggtgcgatc-tcgg--ctcactgcaacctccgccttctgggttaaagtgattctcct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811396 108 + 43916225 ttttttttttttg-agatgggagtttcactcttgtcaccccggctcgagtgcagtggtgagatc-tcgg--ctcactgcaacctctacctcctgggttaaagtgattctcct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241624 108 + 75399963 ttttttttttttt-gtgatggagtttcactcttgtcaccccggctcgagtgcagtggcacgatc-tcgg--ctcactgcaacctccgcctcctgggttaaagtgattctcct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809103 108 - 7209941 ttttttttttttg-agatgggagtttcactcttgtcaccctggctccagtgcagtggtgagatc-tcgg--ctcactgcaacctccgcctcctgggttaaagtgattctcct i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549479 107 - 44557958 ctttttcttttgg-agac-agagtttcactcttatcatccaggctggagcgcagtggtatgatc-tcag--ctcactgcaacctccacctcccaggctcaagcgattctcct i calJac3.chr20 C 0 I 22 s saiBol1.JH378225 6361909 107 + 6628207 cttttttttttgg-agac-agagtttcactcttatcatccaggctggagtgcagtggcatgatc-tcag--ctgactgcaacctccacctcccaggctcaagcgattttcct i saiBol1.JH378225 C 0 I 22 s aotNan1.NW_018500622v1 9299221 107 - 10531588 ctttttattttgg-agac-agagtttcactcttatcatccaggctggagtgcagtggcatgatc-tcag--ctcactgcaacctctacctcccaggctcaagcgattctcct i aotNan1.NW_018500622v1 C 0 I 122 s otoGar3.GL873566 13728233 92 + 13852661 gttattgtttttg-agac-agagtctcac-cttgttgccctccatagagtgctgtggca------tcagacctcacagcaagttcaaacttttgggctcaa----------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M a score=62837.000000 s hg38.chr16_GL383557v1_alt 67028 8 + 89672 gcctcagc s panTro5.chr16 21498488 8 - 81586097 gcctcagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21560419 8 - 90481686 gcctcagc i panPan2.chr16 C 0 M 560 s gorGor5.CYUI01000018v1 792945 8 + 3010529 gcctcagc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906404 8 + 163208435 gcctcagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21378600 8 - 74971481 gcctcagc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091206 8 - 78541002 gcctcagc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483940 8 + 26466322 gcctcagc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811504 8 + 43916225 gcctcagc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241732 8 + 75399963 gcctcagc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809211 8 - 7209941 gcctcagc i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549608 8 - 44557958 ccctcagc i calJac3.chr20 I 22 C 0 s saiBol1.JH378225 6362038 8 + 6628207 ccctcagg i saiBol1.JH378225 I 22 C 0 s otoGar3.GL873566 13728325 8 + 13852661 gcctcagc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e aotNan1.NW_018500622v1 9299328 122 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M a score=437672.000000 s hg38.chr16_GL383557v1_alt 67036 94 + 89672 ctcccaagtagctgggattacaggcgcctaccaccacacccggctaattttttgt-ttttct-----tttttttttttttgagatggagtttcactcttt s panTro5.chr16 21498496 99 - 81586097 ctcccaagtagttgggattacaggcgcctaccaccacacccggctaattttttgt-ttttctttttctttttttttttttgagatggagtttcactcttt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 792953 94 + 3010529 ctcccaagtagctgggattacaggcgcctaccaccacacccggctaattttttgt-ttttct-----tttttttttttttgagatggagtttcactcttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53906412 95 + 163208435 ctctcaagtagctgggattacaggcgcgtaccaccacacccggctaattttttgtatttttT-----TTTTTTTTTTTTTGAGATGGAGTTTCACTCTTT i nomLeu3.chr2 C 0 I 4516 s rheMac8.chr20 21378608 93 - 74971481 ctcccgagtagctgggattacaggagcctactaccacacctggctaattttttgt-attttc------ttttttttttttgagatggagtttcactcttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091214 93 - 78541002 ctcccgagtagctgggattacaggagcctactaccacacctggctaattttttgt-attttc------ttttttttttttgagatggagtttcactcttt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14483948 93 + 26466322 ctcccgagtagctgggattacaggagactactaccacacctggctaattttttgt-attttc------ttttttttttttgagatggagtttcactcttt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811512 87 + 43916225 ctcccgagtagctgggattacaggagcctactaccacacctggctaattttttgt-at----------ttttttttttttgagatggg--ttcactcttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58241740 99 + 75399963 ctcccgagtagctgggattacaggagcctactaccacacctggctaattttttgt-attttcttttttttttttttttttgagatggagtttcactcttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809219 94 - 7209941 ctcctgagtagctgggattacaggagcctactaccacacctggctaattttttgt-attttc-----tttttttttttttgagatggagtttcactcttt i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549616 85 - 44557958 ctcccgagtagctgggattgcagaagctcgccaccacccctggctaattttttat-attttt--------------agtagagatagggtttcgtcatgt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6362046 85 + 6628207 ctcccaagtagctgggattgcagaagcccaccaccacatttggctacttttttgt-attttt--------------agtagagataaggttttgtcatgt i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13728333 71 + 13852661 ttctccagtagctgagactataggc-cctgccacaacacccagcta----------ctttta------------------gagacagggtcttactcttg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e aotNan1.NW_018500622v1 9299328 122 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M a score=41647.000000 s hg38.chr16_GL383557v1_alt 67130 14 + 89672 ctcccaggctggag s panTro5.chr16 21498595 14 - 81586097 ctcccaggctggag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793047 14 + 3010529 ctcccaggctggag i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21378701 14 - 74971481 ctcccagactggag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091307 14 - 78541002 ctcccagactggag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14484041 14 + 26466322 ctcctagactggag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20811599 14 + 43916225 ctcccggactggag i cerAty1.NW_011999143v1 C 0 I 966 s chlSab2.chr5 58241839 14 + 75399963 cccccagactggag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809313 14 - 7209941 ctcccagactggag i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549701 12 - 44557958 tgggcaagctgg-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6362131 12 + 6628207 tgggcaagctgg-- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13728404 10 + 13852661 --ctcaggctgg-- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e aotNan1.NW_018500622v1 9299328 122 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M e nomLeu3.chr2 53906507 4516 + 163208435 I a score=335118.000000 s hg38.chr16_GL383557v1_alt 67144 111 + 89672 tgcaatggcatgatcttgactcactgcaacctccaccttccgg-tttcaagtgattctcctgcctcagcctcccgagcagctgggattacaggcacccaccaccatgcctgg s panTro5.chr16 21498609 111 - 81586097 tgcaatggcatgatcttgactcactgcaacctccaccttctgg-tttcaagtgattttcctgcctcagcctcccgagtagctgggattacaggcacccaccaccatgcctgg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793061 111 + 3010529 tgcaatggcatgatcttggctcactgcaacctccaccttccggttttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcaccc-ccaccatgcctgg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21378715 111 - 74971481 tgcaatggcatgatcttggctcactgcaacctccacctcccag-tttcaagggattctcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccattgccgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091321 111 - 78541002 tgcaatggcatgatcttggctcactgcaacctccacctcccag-tttcaagggattctcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccattgccgg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14484055 111 + 26466322 tgcaatggcatgatcttggctcactgcaacctccacctcccag-tttcaagggattctcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccattgccgg i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58241853 111 + 75399963 tgcaatgacatgatcttggctcactgcaacctccacttcccag-tttcaagggattctcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccatgtctgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809327 111 - 7209941 tgcaatggcatgatcttggctcactgcaacctccacctcccag-ttccaagggattctcctgcctcagcctcccgagtagctgggattacaggtacccgccaccatgcccgg i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549713 82 - 44557958 -----------------------------tatcgaactcctga-cctcaggtgatctgccagtcttggcctccccaagtgctgggattacaggcatgagccaccatgctcgg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6362143 82 + 6628207 -----------------------------tctccaactcctga-cctcaggtgatctgccagccttggcctccccaagtgctgggattaaaggcatgagccaccatgctcag i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13728414 82 + 13852661 -----------------------------tctcaaactcctga-gctcaagcaatccaccagccttgtcctcccagagtgataggattacaggagtgaaccaccatggccgg i otoGar3.GL873566 C 0 I 2784 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e aotNan1.NW_018500622v1 9299328 122 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e nomLeu3.chr2 53906507 4516 + 163208435 I a score=3321.000000 s hg38.chr16_GL383557v1_alt 67255 1 + 89672 c s panTro5.chr16 21498720 1 - 81586097 c i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793172 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21378826 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091432 1 - 78541002 c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14484166 1 + 26466322 c i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58241964 1 + 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809438 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21549795 1 - 44557958 c i calJac3.chr20 C 0 I 72 s saiBol1.JH378225 6362225 1 + 6628207 c i saiBol1.JH378225 C 0 I 1974 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e aotNan1.NW_018500622v1 9299328 122 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e otoGar3.GL873566 13728496 2784 + 13852661 I e nomLeu3.chr2 53906507 4516 + 163208435 I a score=428682.000000 s hg38.chr16_GL383557v1_alt 67256 183 + 89672 taatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccaccttggtctcccaaagtgttgggattataggcgtgaaccactgcacctggcttaatttttgtatttttagtagaaacggggtctcactatgttggccgg s panTro5.chr16 21498721 183 - 81586097 taatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcggtctcccaaagtgttgggattataggcgtgaaccactgcacctggcttaatttttgtatttttagtagaaacggcgtctcactatgttggccgg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793173 182 + 3010529 taatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcggtct-ccaaagtgttgggattacaggcgtgaaccactgcacctggcttaatttttgtatttttaatagaaacgggatctcactatgttggccag i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21378827 182 - 74971481 taatttttgtatttttagtagaaacggggtttcaccacgttggccagactggtcttgaactcctgacc-aaggtgatccacccacctcggtctcccaaagtgttgggattacagatgtgaaccaccacacctggcttaatttttgtatttttagtagaaacagggtttcaccatgttggccag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091433 182 - 78541002 taatttttgtatttttagtagaaacggggtttcaccacgttggccagactggtcttgaactcctgacc-aaggtgatccacccacctcggtctcccaaagtgttgggattacagatgtgaaccaccacacctggcttaatttttgtatttttagtagaaacagggtttcaccatgttggccag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14484167 174 + 26466322 taatttttgtatttttagtagaaacggggtttcaccacgttggccagactggtcttgaactcctgacc-aaggtgatccacccacctcggtctcccaaagtgttgggattacagatgtgaaccaccacacctggctta--------ttttttagtagaaacagggtttcaccatgttggccag i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58241965 182 + 75399963 taatttttgtatttttagtagaaacggggtttcaccacgttggccagactggtcttgaactcctgacc-aaggtgatccacccacctcggtctcccaaagtgttgggattacagatgtgaaccaccacacccggcttaatttttatatttttagtagaaacagggtttcaccatgttggccag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809439 182 - 7209941 taatttttgtatttttagtagaaacggggtttcaccacgttggccagactggtcttgaactcctgacc-aaggtgatccacccacctcggtctcccaaagtgttgggattacagatgtgaaccaccacacctggcttaatttttgtatttttagtagaaacagggtttcaccatgttggccag i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e aotNan1.NW_018500622v1 9299328 122 - 10531588 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e saiBol1.JH378225 6362226 1974 + 6628207 I e calJac3.chr20 21549796 72 - 44557958 I e otoGar3.GL873566 13728496 2784 + 13852661 I e nomLeu3.chr2 53906507 4516 + 163208435 I a score=324443.000000 s hg38.chr16_GL383557v1_alt 67439 115 + 89672 gctggttttgaacttctgacctc--atgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccaccgcaccAGTCCTCATTTTCTTAAAAAAATACCTATTGGT s panTro5.chr16 21498904 115 - 81586097 gctggttttgaacttctgacctc--atgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccaccacaccAGTCCTCATTTTCTTAAAAAAATACCTATTGGT i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793355 115 + 3010529 gctggttttgaactcctgacctc--atgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccaccgcaccAGTCCTCATTTTCTTAAAAAAATACCTATTGGT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21379009 113 - 74971481 gttggtctccaactcttggcctc--gtgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccacTACACTGGTCCTCATTTTCTTAAGAAA--ACCTATTGGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21091615 113 - 78541002 gttggtctccaactcttggcctc--gtgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccactacacTGGTCCTCATTTTCTTAAGAAA--GCCTATTGGT i macFas5.chr20 C 0 I 271 s macNem1.NW_012011355v1 14484341 113 + 26466322 gttggtctccaactcttggcctc--gtgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccacTACACTGGTCCTCATTTTCTTAAGAAA--GCCTATTGGT i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58242147 113 + 75399963 gttggtctccaactcctggcctc--atgatctacccacctgggcctcccaaagtgctgggattacaggcgtaagccactacaccAGTCCTCATTTTCTTAAGAAA--GCCTATTGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6809621 113 - 7209941 gttggtctccaactcttcgcctc--gtgatccacccacctcggcctcccaaagtgctgggattacaggcgtaagccactacaccAGTCCTCATTTTCTTAAGAAA--GCCTATTGGT i manLeu1.NW_012101698v1 C 0 C 0 s aotNan1.NW_018500622v1 9299450 117 - 10531588 gctggtctcgaactcctgacctcaggtgatctgccagccttggcctccccaagtgctgggattacaggcatgagccaccacactcggccTCATTTTCTTAAAAAAATGCCTATTGGC i aotNan1.NW_018500622v1 I 122 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e saiBol1.JH378225 6362226 1974 + 6628207 I e calJac3.chr20 21549796 72 - 44557958 I e otoGar3.GL873566 13728496 2784 + 13852661 I e nomLeu3.chr2 53906507 4516 + 163208435 I a score=15652.000000 s hg38.chr16_GL383557v1_alt 67554 5 + 89672 Tggcc s panTro5.chr16 21499019 5 - 81586097 Tggcc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793470 5 + 3010529 Tggcc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21379122 5 - 74971481 TGGCC i rheMac8.chr20 C 0 I 864 s macFas5.chr20 21091999 5 - 78541002 Tggct i macFas5.chr20 I 271 C 0 s macNem1.NW_012011355v1 14484454 5 + 26466322 TGGCC i macNem1.NW_012011355v1 C 0 I 1813 s chlSab2.chr5 58242260 5 + 75399963 TGGCC i chlSab2.chr5 C 0 I 990 s manLeu1.NW_012101698v1 6809734 5 - 7209941 TGGCC i manLeu1.NW_012101698v1 C 0 I 638 s aotNan1.NW_018500622v1 9299567 5 - 10531588 Cggcc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e colAng1.NW_012123265v1 549247 1684 + 3907144 M e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e saiBol1.JH378225 6362226 1974 + 6628207 I e calJac3.chr20 21549796 72 - 44557958 I e otoGar3.GL873566 13728496 2784 + 13852661 I e nomLeu3.chr2 53906507 4516 + 163208435 I a score=3428.000000 s hg38.chr16_GL383557v1_alt 67559 5 + 89672 gggcg s panTro5.chr16 21499024 5 - 81586097 gggcg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793475 5 + 3010529 gggcg i gorGor5.CYUI01000018v1 C 0 C 0 s macFas5.chr20 21092004 5 - 78541002 gggcg i macFas5.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9299572 5 - 10531588 aggta i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M e manLeu1.NW_012101698v1 6809739 638 - 7209941 I e chlSab2.chr5 58242265 990 + 75399963 I e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e saiBol1.JH378225 6362226 1974 + 6628207 I e calJac3.chr20 21549796 72 - 44557958 I e otoGar3.GL873566 13728496 2784 + 13852661 I e nomLeu3.chr2 53906507 4516 + 163208435 I a score=238378.000000 s hg38.chr16_GL383557v1_alt 67564 232 + 89672 cagtggctcatgcctataatcccagcactttggga-ggccaaggcaggcggatca--cgaggtcaggagtttgagaccagcctggccaacatggtgaaa-ccccatctctacc------aaaaattaaaaaaattagctgggtgtggtggcgtgcgcctgtaatcccagctactcaggagggtgaggcaggagaatcacttgaacctaggaggcggaggttgcagtgagcagagactgcgcc s panTro5.chr16 21499029 232 - 81586097 cagtggctcatgcctataatcccagcactttggga-ggccaaggcaggcggatca--cgaggtcaggagtttgagaccagcctggccaacatggtgaaa-ccccatctctacc------aaaaattaaaaaaattagctgggcgtggtggcgtgcgcctgtaatcccagctactcaggagggtgaggcaggagaatcacttgaacctaggaggcggaggttgcagtgagcagagactgcgcc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793480 231 + 3010529 cagtagctcatgcctataatcccagcactttggga-ggccaaggcaggcggatca--cgaggtcaggagtttgagaccaccctggccaacatggtgaaa-ccccatctctacc------aaaaattaaaaaaa-tagctgggcgtggtggcgtgcgcctgtaatcccagctactcaggagggtgaggcaggagaatcacttgaacctaggaggcggaggttgcagtaagcagagactgcacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911023 232 + 163208435 cggtggctcatgcctataatcccagcactttggga-ggccaaggcaggtggatca--cgaggtcaggagttcgagaccagcctggccaacatggtgaaa-ccccatttccacc------aaaaataaaaaaaatcagccgagagtggtggcgtgcgcctataatcccagctactcaggaggctgaggcaggagaatcacttgaaactaggaggcagaggttgcagtgagcagagactgtgcc i nomLeu3.chr2 I 4516 C 0 s macFas5.chr20 21092009 241 - 78541002 cagtggctcacacctgtagctatagcactttggaagggccagggagggaggaacatttgagtccacgagttcaagaccagcctgggcaacatagcaagacccccatctctacttaaaaaaaaaaaaaaaaaaattagctaggtgtggtggggctcgcctgtagtcccagctagtcaggacactgaggtgggaggattgcttgagccca-gaggtcaaggctgcagtgagctgtgactgtgcc i macFas5.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9299577 230 - 10531588 cagtagctcacgcctgtaatcccagcactttggga-agctgaggcaggcagacca--tgagctcaggagttcaagactagcctagccaacagagtgaaa-agctgtctctact------aaaaat-acaaaaattggct-gtcgtggtggccgtcgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacctggaaggcagaggttgcagtgagcagagatcgcgcc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M e manLeu1.NW_012101698v1 6809739 638 - 7209941 I e chlSab2.chr5 58242265 990 + 75399963 I e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e saiBol1.JH378225 6362226 1974 + 6628207 I e calJac3.chr20 21549796 72 - 44557958 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=51744.000000 s hg38.chr16_GL383557v1_alt 67796 56 + 89672 accacactccagcctgggcaacagtgcaagactcaatctc-aa----------------------------aaaaaaaacaaaaG-- s panTro5.chr16 21499261 57 - 81586097 accacactccagcctgggcaacagtgcaagactcgatctcaaa----------------------------aaaaaaaacaaaaG-- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793711 56 + 3010529 accacactccagcctgggcaacagtgcaagactcgatctt-aa----------------------------aaaaaaaacaaaaG-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911255 51 + 163208435 accacactccagcctgggcaacagtgcaagactctgtctc-aa----------------------------aaaa-----aaaaa-- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21092250 52 - 78541002 actgcact-cagtctagttgacagagtgaaaccttgtctc-aa----------------------------aaaaataaaaa----- i macFas5.chr20 C 0 C 0 s calJac3.chr20 21549868 58 - 44557958 actgctctccagcctgggcaacaatgcaagactcagcctc-aa----------------------------aaataaataaataaaT i calJac3.chr20 I 72 C 0 s aotNan1.NW_018500622v1 9299807 86 - 10531588 actgctctccagcctgtgcaacagtgcaagactcagtctc-aaaaataaataaataagcaaacaaacaaataaataaataaataaat i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M e manLeu1.NW_012101698v1 6809739 638 - 7209941 I e chlSab2.chr5 58242265 990 + 75399963 I e cerAty1.NW_011999143v1 20811613 966 + 43916225 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=304625.000000 s hg38.chr16_GL383557v1_alt 67852 128 + 89672 GCCTATTggctgggcgcagtggctcacacctgtaactacagcacttcggaagggccagggcgggaggaacgcttgagtccaggagttcaagaccagcctgggcaacacagcaaaa-cctcatctct---------------------------------act--- s panTro5.chr16 21499318 128 - 81586097 GCCTACTggctgggcgcagtggctcacacctgtaactacagcacttcggaagggccagggcgggaggaacgcttgagtccaggagttcaagaccagcctgggcaacacagcaaga-cctcatctct---------------------------------act--- i panTro5.chr16 C 0 I 15 s gorGor5.CYUI01000018v1 793767 128 + 3010529 GCCTATTggctgggcgcagtggctcacacctataactacagcacttcggaagggccaggacgggaggaacgcttgagtccaggagttcaagaccagcctgggcaacacagcaaga-cctcatctct---------------------------------aca--- i gorGor5.CYUI01000018v1 C 0 I 14 s nomLeu3.chr2 53911306 128 + 163208435 GCCTATTggctgggcgcagtggctcacacctgtaactacagcacttcggaagggccagggcgggaggaatgcttgagtccaggagttcaagaccagcctgggcaacatagcaaga-cctcatctct---------------------------------act--- i nomLeu3.chr2 C 0 I 16 s macFas5.chr20 21092302 120 - 78541002 -----GCggccgggcgcggtggctcaagcctgtaatcccagcactttggga-ggccgaggcgggtggatca--cgaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctct---------------------------------act--- i macFas5.chr20 C 0 I 3 s cerAty1.NW_011999143v1 20812579 129 + 43916225 GCCTACTggctgggtgcagtggctcacacctgtagctatagcactttggaagggccagggagggaggaacatttgagtccacgagttcaagaccagcctgggcaacatagcaagacccccatctct---------------------------------act--- i cerAty1.NW_011999143v1 I 966 I 6 s manLeu1.NW_012101698v1 6810377 129 - 7209941 GCCTACTggctgggcgcagtggctcacacctgtagctatagcactttggaagggccagggagggaggaacatttgagtccatgagttcaagaccagcctggataacatagcaagacccccatctct---------------------------------act--- i manLeu1.NW_012101698v1 I 638 I 7 s calJac3.chr20 21549926 164 - 44557958 GCCTATTggttgggcacggttgctcacacctataactacagcactttggaagggccagggtggaaggaatgcttgagtacaggagttcaagaccaacctgggcaacataggaaaa-tcctatctcttaaaacacaaaatcatgaagtgggacttaaggaaaaaaa i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9299893 130 - 10531588 GCCTATTggttgagcacggttgctcacacctataactatagcactttggaagggccaggatgggaggaatgcttgagta-aggagttcaagaccaacctgggcaacataggaaaa-ccctatctct---------------------------------aagaaa i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e panPan2.chr16 21560427 560 - 90481686 M e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M e chlSab2.chr5 58242265 990 + 75399963 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=232218.000000 s hg38.chr16_GL383557v1_alt 67980 69 + 89672 aaaaaaaaagattagctaggtgtggtgggactcgcctgtagtcccagctactcaggacactgaggtgga s panTro5.chr16 21499461 69 - 81586097 aaaaaaaaagattagctaggtgtggtgggactcgcctgtagtcccagctactcaggacactgaggtgga i panTro5.chr16 I 15 C 0 s panPan2.chr16 21561007 69 - 90481686 aaaaaaaagaattagctaggtgtggtgggactcgcctgtagtcccagctactcaggacactgaggtgga i panPan2.chr16 M 560 C 0 s gorGor5.CYUI01000018v1 793909 69 + 3010529 aataaaaaagattagctaggtgtggtgggactcgcctgtagtcccagctactcaggatactgaggtgga i gorGor5.CYUI01000018v1 I 14 C 0 s nomLeu3.chr2 53911450 69 + 163208435 aaaaaaaaagattagctaggtgtggtgggactcgcctgtagtcccagctactcaggacactgaggtggg i nomLeu3.chr2 I 16 C 0 s macFas5.chr20 21092425 68 - 78541002 aatacaaaaaactagctgggcgtggtggcgggcgcctgtagtcccagctactc-ggaggctgaggcagg i macFas5.chr20 I 3 C 0 s cerAty1.NW_011999143v1 20812714 69 + 43916225 aaaaaaaaaaattagctaggtggggtggggctcgcctgtagtcccagctagtcaggacactgaggtggg i cerAty1.NW_011999143v1 I 6 C 0 s manLeu1.NW_012101698v1 6810513 69 - 7209941 aaaaaaaaaaattagctaggtggggtggggctcgcctgtagtcccagctagtcaggacacttaggtggg i manLeu1.NW_012101698v1 I 7 C 0 s calJac3.chr20 21550090 69 - 44557958 aaaaaaaaagattagctaggtgtggtggggctggcccgcagtcccagctactcgggaggtggaggtggg i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9300023 68 - 10531588 aaaaaaaaagattagctaggtgtggtggggctcgcctatagtcccagctactt-ggaggcagaggtggg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e colAng1.NW_012123265v1 549247 1684 + 3907144 M e chlSab2.chr5 58242265 990 + 75399963 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=362313.000000 s hg38.chr16_GL383557v1_alt 68049 88 + 89672 aggatcgcttgagcag-agaggtcaaggctgcagtgagctgtgactgtgccactgcact-cagtctgggtgacagagtgaaa-ccctgtct s panTro5.chr16 21499530 88 - 81586097 aggatcgcttgagcag-agaggtcaaggctgcagtgagctgtgactgtgccactgcact-cagtctgggtgacagagtgaaa-ccctgtct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561076 88 - 90481686 aggatcgcttgagcag-agaggtcaaggctgcagtgagctgtgactgtgccactgcact-cagtctgggtgacagagtgaaa-ccctgtct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 793978 88 + 3010529 aggatcgcttgagcag-agaggtcaaggctgcagtgagctgtgactgcgccacagcact-cagtctaggtaacagagtgaaa-ccctgtct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911519 88 + 163208435 aggatcgcttgagcca-agaggtcaaggctgcagtgagctgtgactgcgccactgcact-cagtctgggtgacagagtgaaa-ccctgtct i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21092493 90 - 78541002 agaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacacagcgaga-ctccgtct i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20812783 88 + 43916225 aggattgcttgagccc-agaggtcaaggctgcagtgagttgtgactgtgccactgcact-cagtctagctgacagagtgaaa-tcttgtct i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6810582 88 - 7209941 aggactgcttgagccc-agaggtcaaggctgcagtgagttgtgactgtgccactgcact-cagtctagctgacagagtgaaa-ccttgtct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 550932 88 + 3907144 aggattgcttgagccc-agaggtcaaggctgcagtgagctgtgactgtgccactgcact-cagtctgggtgacagagtgaaa-ccctgtct i colAng1.NW_012123265v1 M 1684 C 0 s calJac3.chr20 21550159 88 - 44557958 aggactgcttaagccc-agaggtcaaggatgcagtgagctgtgattgcgccactgtgct-cagtctgggtgacagagtgaaa-ccctgtct i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9300091 88 - 10531588 aggactgcttaagccc-aaaggtcaaggctgcagtgagctgtgattgcgccactgtgct-cagtctgggcg-cagagtgaaacccctgtct i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80480831 4 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e chlSab2.chr5 58242265 990 + 75399963 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=12606.000000 s hg38.chr16_GL383557v1_alt 68137 2 + 89672 ca s panTro5.chr16 21499618 2 - 81586097 ca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561164 2 - 90481686 ca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794066 2 + 3010529 ca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911607 2 + 163208435 ca i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21092583 2 - 78541002 ca i macFas5.chr20 C 0 I 28 s cerAty1.NW_011999143v1 20812871 2 + 43916225 ca i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6810670 2 - 7209941 ca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 551020 2 + 3907144 ca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21550247 2 - 44557958 ca i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9300179 2 - 10531588 ca i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80480835 2 + 88915250 CA i canFam3.chr5 I 4 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e macNem1.NW_012011355v1 14484459 1813 + 26466322 I e rheMac8.chr20 21379127 864 - 74971481 I e chlSab2.chr5 58242265 990 + 75399963 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=141095.000000 s hg38.chr16_GL383557v1_alt 68139 19 + 89672 aaaaaata-aaaaGCTTATT s panTro5.chr16 21499620 19 - 81586097 aaaaaata-aaaaGCTTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561166 19 - 90481686 aaaaaata-aaaaGCTTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794068 19 + 3010529 aaaaaata-aaaaGCTTATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911609 19 + 163208435 aaaaaata-aaaaGCATATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21379991 19 - 74971481 aaaaaata-aaaaGCATATT i rheMac8.chr20 I 864 C 0 s macFas5.chr20 21092613 19 - 78541002 aaaaaata-aaaaGCATATT i macFas5.chr20 I 28 C 0 s macNem1.NW_012011355v1 14486272 19 + 26466322 AAAAAATA-AAAAGCATATT i macNem1.NW_012011355v1 I 1813 C 0 s cerAty1.NW_011999143v1 20812873 19 + 43916225 aaaaaata-aaaaGCATATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58243255 19 + 75399963 aaaaaata-aaaaGCATATT i chlSab2.chr5 I 990 C 0 s manLeu1.NW_012101698v1 6810672 19 - 7209941 aaaaaata-aaaaGCATATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 551022 19 + 3907144 aaaaaata-aaaaGCATATT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21550249 19 - 44557958 aaaaaata-aaaaGCATAGT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9300181 19 - 10531588 aaaaataa-aaaGGCATAGT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80480837 20 + 88915250 AGCAAACACAAAACCACATG i canFam3.chr5 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 935295 0 + 1009443 C e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=1594917.000000 s hg38.chr16_GL383557v1_alt 68158 203 + 89672 TAACCGCGTACAAA-ACTAACAGCGtttgtggagaactg-agagt-aaagcctttccctctgagtaaatccatctgtacaaactgcttataaatgtgtcattgaatagggagtctacagctctacacca--ggtttaaaataaataaatgcctaggcatggatttttatgtacaattgcaaag-catgtgca-cgctacacacaaacact s panTro5.chr16 21499639 203 - 81586097 TAACCGCGTACAAA-ACTAACAGCGtttgtggagaactg-agagt-aaagcctttccctctgagtaaatccatctgtacaaactgcttataaatgtgtcattgaatagggagtctacagctctacacca--ggtttaaaataaataaatgcctaggcatggatttttatgtacaattgcaaag-catgtgca-cgctacacacaaacact i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561185 203 - 90481686 TAACCGCATACAAA-ACTAACAGCGtttgtggagaactg-agagt-aaagcctttccctctgagtaaatccatctgtacaaactgcttataaatgtgtcattgaatagggagtctacagctctacacca--ggtttaaaataaataaatgcctaggcatggatttttatgtacaattgcaaag-catgtgca-cgctacacacaaacact i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794087 201 + 3010529 TAACCGCTTACAAA-ACTAACAGCGtttgtggagaactg-agagt-aaagcctttcc--ctgagtaaatccatctgtacaaactgcttataaatgtgtcattgaatagggagtctacagctctacacca--ggtttaaaataaataaatgcctaggcatggatttttatgtacaattgcaaag-catgtgca-cgctacacacaaacact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911628 203 + 163208435 TAACTGCTTACAAA-ACTAACAGCAtttgtggagaactg-agagt-aaagcctttccctctgagtaaatccatctgtacaaactgcttataaatgtgtcattgcatagggagtctacaggtctacacta--agtttaaaagaaattaatgcctaggcatggatttttatgtacgattgcaaag-catgtgca-tgctacacacaaacact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380010 199 - 74971481 TAACTGCTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttccctccgagtaaatccatctgtacaaactgcttataaatgtgttattgaatagggagtctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggctttttatgtacaattgcaaag-catgtgca-cgctacac----acact i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21092632 199 - 78541002 TAACTGCTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttccctccgagtaaatccatctgtacaaactgcttataaatgtgttattgaatagggagtctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggctttttatgtacaattgcaaag-catgtgca-cgctacac----acact i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14486291 199 + 26466322 TAACTGGTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttccctccgagtaaatccatctgtacaaactgcttataaatgtgttattgaatagggagtctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggctttttatgtacaattgcaaag-catgtgca-cgctacac----acact i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20812892 199 + 43916225 TAACTGCTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttccctccgagtaaatccatctgtacaaactgcttataaatgtgtcactgaatagggagtctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggctttttatgtacaattgcaaag-catgtgca-cgctacac----acact i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58243274 198 + 75399963 TAACTGCTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttccctccgagtaaatccatctgtacaaactgcttataaatatgtcattgaatagggagtctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggc-ttttatgtacaattgcaaag-catgtgca-cgctacac----acact i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6810691 199 - 7209941 TAACTGCTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttccctccgagtaaatccatctgtacaaactgcttataaatgtgtcattgaatagggagtctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggctttttatgtacaattgcaaag-catgtgca-cgctacac----acact i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 551041 199 + 3907144 TAACTGCTTACAAA-ACTAACAGCAtttgtgaagaactg-agagt-aaagcctttcccgccgagtaaatccatctgtataaactgcttataaatgtgtcattgaatagggaatctatggctctacacca--ggtttaaaagaatttaatgcctaggcatggctttttatgtacaattgcaaag-catgtgca-ccctacac----actct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21550268 189 - 44557958 TAACCACTTACAAA-ATGAACAGCATTTGTGAAGAACTG-AGAGTAAAAGCCTTTCCCTCAGAGTAAATTCTTCTATACATATTGCTT-----------ATTGAACAGGGAGTCTAAAGCTGTATGCTA--TGTTTTAAAGAAATTAACATCTAGGCACGGATTTTTATGTACAATTACAAAG-CATGTGCA-TGCTATAC----ACACT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9300200 174 - 10531588 TAACCGCTTACAAA-ATGAACAGCATTTGTGGAGAACTG-AGAGTAAAAGCTTTTCCCTCAGAGTAAATCCTTCTAT-----------------------TTGAACAGGGAGTCTACAGCTATACTCTA--GGTTCAAAGAAGATTAACGTCTAGGCA--GTATTTTATGTACAATTGCAAAGacatgtgca-tgctacac----aca-- i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80480857 189 + 88915250 TAACTGCTTACAAA-ACTGACTGCATTtgcagaaaacttcagagt-aaagcttttgctacc--atccctctatctgtatgaattgctcataaatatgtcattgaacaaggaatctatagctctacacta--gataaaaaagaaactaatgcctagacatggacatgtatatacagttgcaaga-catgtgca-ctct------------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 935295 199 + 1009443 TAACTGCTTAAAAATACTGACAGCATTTTC--AGAAGCC-ATACt-aaagttttctctgct------atctctgtatatgaattgctcaaaaacacgtcatttatcagagagcctatagctgtatacaatggatttaaaagaatttaatgctgaggtatgaacatttatgtaaaactgcaagg-caagtgtaccactatgcaacaacacc i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e saiBol1.JH378225 6362226 1974 + 6628207 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=2626984.000000 s hg38.chr16_GL383557v1_alt 68361 268 + 89672 --ctttaaatgccaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacaaaggttacactatgcagttaacaggtaaacccattaagtgttgcagtttgatgttattc-tata----cacttttaatgcttattccaagttttgggtagttcgaatctgattcttataatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacagcgtcattac---tgattagtgaaaaatgttttcccagtatt s panTro5.chr16 21499842 268 - 81586097 --ctttaaatgccaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacaaaggttacactatgcagttaacaggtaaacccattaagtgttgcagtttgatgttattc-tata----cacttttaatgcttattccaagttttgggtagttcgaatctgattcttataatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacagcgtcattac---tgattagtgaaaaatgttttcccagtatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561388 268 - 90481686 --ctttaaatgccaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacaaaggttacactatgcagttaacaggtaaacccattaagtgttgcagtttgatgttattc-tata----tacttttaatgcttattccaagttttgggtagttcgaatctgattcttataatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacagcgtcattac---tgattagtgaaaaatgttttcccagtatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794288 268 + 3010529 --ctttaaatgccaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacaaaggttacactatgcagttaacaggtaaacccattaagtgttgcagtctgatgttattc-tata----cacttttaatgcttattgcaagttttgggtagttcgaatctgattcttataatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacagcatcattac---tgattagtgaagaatgttttcccagtatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53911831 268 + 163208435 --ctttaaatgccaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacaaaggttacactatgcagttaacaggtaaacccattaagtgttgcagtttgatgttcttc-tata----cacttttaatgcttatttcaagttttgggtagttcgaatttgattcttataatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacagcatcattac---tgattagtgaagaatgttttcccagtatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380209 268 - 74971481 --ctttaaatactaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacgaaggttacgctatgcagttaacaggtaaacccattaagtattgcagtttgatgttattc-tata----cacttttaatgcttattgcaagttttggatagttcgaatctgattcttacgatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacggtgtcattac---tgattagtgaaaaatgttttcccagcatt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21092831 268 - 78541002 --ctttaaatactaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacgaaggttacgctatgcagttaacaggtcaaccctttaagtattgcagtttgatgttattc-tata----cacttttaatgcttattgcaagttttggatagttcgaatctgattcttatgatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacggtgtcattac---tgattagtgaaaaatgttttcccagcatt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14486490 268 + 26466322 --ctttaaatactaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacgaaggttacgctatgcagttaacaggtaaacccattaagtattgcagtttgatgttattc-tata----cacttttaatgcttattgcaagttttggatagttcgaatctgattcttatgatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacggtgtcattac---tgattagtgaaaaatgttttcccagcatt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813091 268 + 43916225 --ctttaaatactaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacgaaggttacgctatgcagttaacaggtaaacccattaagtattgcagtttgatgttattc-tata----cacttttaatgcttattgcaagttttggatagttcgaatctgattcttatgatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacggtgtcattac---tgattagtgaaaaatgttttcccagcatt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58243472 267 + 75399963 --ctttaaatactaggcaaggctcaaagacaagtgctcagtacgtgctcctaccataatgcaacgaaggttacactatgcagttaacaggtaaacccattaagtattgcagtttgatgttgttc-tata----cacttttaatgcttatttcaagttttggatagttcgaatctgattcttatgatg----aagatgaggacatgtaagggatcactaatgactcaa-ttatgact-gacggtgtcattac---tgattagtgaaaaatgttttcccagcatt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6810890 268 - 7209941 --ctttaaatactaggcaaggctcaaagacaagtgctcagtacatgctcctaccataatgcaacgaaggttacagtatgcagttaacaggtaaacccattaagtattgcagtttgatgttattc-tata----cacttttaatgcttattgcaagttttggatagttcgaatctgattcttatgatg----aagatgaggacttgtaagggatcactaatgactcaatttatgact-gacggtgtcattac---tgattagtgaaaaatgttttcccagcatt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 551240 268 + 3907144 --ctttaaatactaggcaagactcaaagacaagcgctcagtacatgctcctaccataatgcaacgaaggttacgctatgcagttaacaggtaaacccattaagtgttgcagtttgatgttattc-tata----cacttttaatgcttattgcaagttttggatagttcgaatctgattcttatgatg----aagatgaggacttgtaaaggatcactaatgactcaattgatgact-gatggtgtcattac---tgattagtgaaaaatgttttcccagcatt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21550457 262 - 44557958 --CTTTAAATGCTAGGCAAGACTCAAAGACAAGTGCTCAGTACATGCTCCAACTACAATGCAACAAAGGTTACACTACGCAAGTAACAGGCAAACCCATTGAGTGTTGCAGTTTGACATTATCC-TATA----AACTTTTAATGCTTATTCCAAGTTTTGGGTAGTTCAAATCTGA-GTTTATGATG----CAGATGAGGACTT-----GGAATACTAATGGCTCAATTTATGACT-GACAGCATCGTTAC---TGATTAGTGAAAAATGTTTTCCCAGTATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6364200 263 + 6628207 --ctctaaatgctaggcaagactcaaagacaagtgctcagtacatgctcctactacaatgcaacaaaggttatactacgcacttaacaggcaaactcattaagtgttgcagtttgacattatcc-tata----aacttttaatgcttattccaagttttgggtagttcaaatctgatttttatgatg----aagatgaggactt-----ggaatactaatgcctcaatttatgact-gacagcatcattac---tgatcagtgaaaaatgtttccccagtatt i saiBol1.JH378225 I 1974 C 0 s aotNan1.NW_018500622v1 9300374 264 - 10531588 --ctttaaatgctaggcaaggctcaaagacaagtgctcagtacatgctcctactacaatgcaacaaaggttatactatgcaagtaacaggcaaacccattaagtggtgcagtttgacattatccatata----aacttttaagtgttattccaagttttgggtagttcaaatctgatttttatgatg----aagatgaggactt-----ggaatactaatgactcaatttatgact-gacatcatcattac---taattagtgaaaaatgttttcccagtatt i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80481046 246 + 88915250 -----taaatgccaggcaaagttcaaaga-------gcagtacgtgctcctgccacaaggtcatcaagattaagtaatgcagttagcaggcaaactcattcaatggtacagtttggtattgttc-tata----aacatttgatgcttaatgccagtttggggtactt---atataattttt---atG----AAGATGAAAACTTCTACGGGGTTATT------TTAATTCAAGTGTGGACAAGATCATTAC---TAATTAGTGAA-AGTATTTTCCTGCTATT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 935494 270 + 1009443 cttctgaaaggccaggcaggggtcaaacccca-tgctaagctcatgctcttgccacaatgtattatagattcagttatgcgg-taacaggcaaacctattaaatactgcactttgatactgttc-tatgctttcatttttaatgcttattgcaaggtt-gggtagttcttatttgacttttaagatgaggaaaggtgaggacttata----gtcattagttatttaatgtgtggat-gacattttcattatttgtgattaatgaaaaaacttctactat---- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e cebCap1.NW_016107433v1 3343779 3857 - 5917169 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=489394.000000 s hg38.chr16_GL383557v1_alt 68629 47 + 89672 cctttttcgaagttttgattatgtt------ta---------ccttgagattacaaggcaag s panTro5.chr16 21500110 47 - 81586097 cctttttcgaagttttgattatgtt------ta---------ccttgagattacaaggcaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561656 47 - 90481686 cctttttcgaagttttgattatgtt------ta---------ccttgagattacaaggcaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794556 47 + 3010529 cctttttcgaagttttgattatgtt------ta---------ccttgagattacaaggcaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912099 47 + 163208435 cttttttcgaagttttgattatgtt------tg---------ccttgagattacaaggcaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380477 47 - 74971481 cctttttcgaagttttgattatgtt------ta---------tcttgagattacaaggcaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093099 47 - 78541002 cctttttcgaagttttgattatgtt------ta---------tcttgagattacaaggcaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14486758 47 + 26466322 cctttttcgaagttttgattatgtt------ta---------tcttgagattacaaggcaag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813359 47 + 43916225 cctttttcgaagttttgattatgtt------ta---------tcttgagattacaaggcaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58243739 47 + 75399963 cctttttcgaagttttgattatgtt------ta---------tcttgagattacaaggcaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6811158 47 - 7209941 cctttttcgaagttttgattatgtt------ta---------tcttgagattacaagacaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 551508 47 + 3907144 ccttttttgaagttttgattatgtt------ta---------tcttgagattacaaggcaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21550719 47 - 44557958 CCTTTTTTGAAGTTTTGATAGTGTT------TA---------CCTTGAGATTACAAGGCAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6364463 47 + 6628207 ccttttttgaagttttaatagtgtt------ta---------ccttgagattacaaggcaag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3347636 47 - 5917169 CCTTTTTTGAAGTTTTGATAGTGTT------ta---------ccttgacattacaaggcaag i cebCap1.NW_016107433v1 I 3857 C 0 s aotNan1.NW_018500622v1 9300638 45 - 10531588 ccttttttgaagtttga--agtgtt------ta---------ccttagaattacaaggcaag i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80481292 48 + 88915250 CCTCT-----AATTTCTATTTAATTAAAAAATA---------TCTTgagggtacttgatagg i canFam3.chr5 C 0 I 257 s dasNov3.JH569970 935764 56 + 1009443 tcttttccaagtttatggttctgtt------taattcaaaagtatcaagatagcaaggtgag i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=2008340.000000 s hg38.chr16_GL383557v1_alt 68676 208 + 89672 ccatgaaaggaactcttattatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaatacagaaagaacctggatgTGTTTACATCACCCACAGATCATTAATTTCAAATTTCCAGGTATGAATGGGTTTCACTGTTTCCATTAGCTGCTTTT-AATGTTACACAGT--ATAGC-TTCCG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA s panTro5.chr16 21500157 208 - 81586097 ccatgaaaggaactcttattatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaatacagaaagaacctggatgTGTTTACATCACCCACAGATCATTAATTTCAAATTTCCAGGTATGAATGGGTTTCACTGTTTCCATTAGCTGCTTTT-AATGTTACACAGT--ATAGC-TTCCG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561703 208 - 90481686 ccatgaaaggaactcttattatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaatacagaaagaacctggatgTGTTTACATCACCCACAGATCATTAATTTCAAATTTCCAGGTATGAATGGGTTTCACTGTTTCCATTAGCTGCTTTT-AATGTTACACAGT--ATAGC-TTCCG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794603 208 + 3010529 ccatgaaaggaactcttattatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaacacagaaagaacctggatgTGTTTACATCACCCACAGATCATTAATTTCAAATTTCCAGGTATGAATGGGTTTCACTGTTTCCATTAGCTGCTTTT-AATGTTACACAGT--ATAGC-TTCCA-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912146 208 + 163208435 ccatgaaaggaactcttattatctgcaaccatttgtctgtgtatatcagaatttt---------------cctcccgaaaatacagaaagaacctggatgTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAATGGGTTTCACTGTTTCCATTAGCTGCTTTT-AATGTTACACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380524 204 - 74971481 ccatgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaatatagaaagaacctggatgTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093146 204 - 78541002 ccatgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------cCTCCCGAAAATATAGAAAGAATCTGGATGTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i macFas5.chr20 C 0 I 323 s macNem1.NW_012011355v1 14486805 204 + 26466322 ccatgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaatatagaaagaacctggatgTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813406 204 + 43916225 ccatgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------cCTCCCGAATATATAGAAAGAACCTGGATGTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58243786 204 + 75399963 ccatgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------cctcccgaaaatacagaaagaacctggatgTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6811205 204 - 7209941 ccatgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------cCTCCCGAAAATATAGGAAGAACCTGGATGTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i manLeu1.NW_012101698v1 C 0 T 6684 s colAng1.NW_012123265v1 551555 204 + 3907144 ccacgaaaggaactc---ttatctgcaactatttgtctgtgtatatcagaatttt---------------ccttccgaaaatatagaaagaacctggatgTGTTTACATCACCCACAAATCATTAATTTCAAATTTCCAGGTATGAAT-GATTTCACTGATTCCATTAGCTGCTTTT-AATGTTATACAGT--ATAGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i colAng1.NW_012123265v1 C 0 I 382 s calJac3.chr20 21550766 205 - 44557958 CCATGAAAAGAACTCTTATTATCTGCAACTATTTGTCTGTGTACA-CAGCATTTT---------------CCTCCCCAAAATATAGAAAGAACCTGAATGTGTTTTCATCACCCACAAATCACTAATTTCAAATTTCCATGTATGAAT-GGTTTCACGG-GGCCAATAGCGGATTTT-AATGTTACAGAGG--ACGGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6364510 204 + 6628207 gcatgaaaagaactcttattatctgcaactatttgtc-gtgtaca-cagcatttt---------------cCTCCCCAAAATATAGAAAGAACCTAGATGTGTTTACATCATCCACAAATCATTAATTTCAAATTTCCATGTATGAAT-GGTTTCACTG-GGCCAGTAGCTGATTTT-AATGTTACAGAGA--ATGGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3347683 204 - 5917169 ccatgaaaagaactc-tattatctgcaactgtttgtctgtgtaca-cagcatttt---------------cctccccaaaacatagaaagaaactggatgTGTTTACATCACCCACAAATGATTAATTTCAAATTTCCATGTATGAAT-GGTTTCACTG-GGCCAGTAGCTGATTTT-AATGTTACAGAGG--ATGGC-TTCTG-GGTTCCATA-------------AAAA-TA-------------------AAACAGGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9300683 198 - 10531588 ccatgaaaagaactcttattatctgcaactattt----gtgtaca-c-gcatttt---------------cctccccaaaatacagaaagaacctggatgTGTTTACATCA-CCACAAATCATTAATTTCAAATTTCCAT-TATGAAG-GGTTTCACT--GGCCAGTAGCTGA-TTT-AATGTTACAGAGG--ATGGT-TTCTGTGGTTCCATA-------------AAAATTA-------------------AAACAGGA i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 935820 256 + 1009443 ctattaaaggaaaacttaccatcta-aaatatttatctgtataaatcagaatttccttgctactatttaacctcctcaaaatatagaaaaaaccttgatgtggattcaccatccacaaattcttaatttgaaattt-tgtgcataaat-ggctttactgtttccaatgactggttttaaatgttataaatttaaaagcaatctt-gatattatacactgaaactaatgaaa-taAATGCATACTGTTTATAGTAAAAAGGA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=80325.000000 s hg38.chr16_GL383557v1_alt 68884 17 + 89672 TTCCAAACCTGGAAAAA s panTro5.chr16 21500365 17 - 81586097 TTCCAAACCTGGAAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561911 17 - 90481686 TTCCAAACCTGGAAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794811 17 + 3010529 TTCCAAACCTGGAAAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912354 17 + 163208435 TTCCAAACCTGGAAAAA i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21093673 17 - 78541002 TTCCAAACCTGGAAAAA i macFas5.chr20 I 323 C 0 s calJac3.chr20 21550971 17 - 44557958 TTCCAAACCTGGAAAAA i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6364714 17 + 6628207 TTCCAAACCTGGAAAAA i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3347887 17 - 5917169 TTCCAAACCTGGAAAAA i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9300881 17 - 10531588 TTCCAAACCTGGAAAAA i aotNan1.NW_018500622v1 C 0 I 11 s dasNov3.JH569970 936076 17 + 1009443 TTCCAAAACAAGAAAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e macNem1.NW_012011355v1 14487009 0 + 26466322 C e rheMac8.chr20 21380728 0 - 74971481 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e manLeu1.NW_012101698v1 6811409 6684 - 7209941 T e chlSab2.chr5 58243990 0 + 75399963 C e cerAty1.NW_011999143v1 20813610 0 + 43916225 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=18266.000000 s hg38.chr16_GL383557v1_alt 68901 8 + 89672 TTATTAGT s panTro5.chr16 21500382 8 - 81586097 TTATTAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561928 8 - 90481686 TTATTAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794828 8 + 3010529 TTATTAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912371 8 + 163208435 TTATTGGT i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21093690 8 - 78541002 TCATTGGT i macFas5.chr20 C 0 C 0 s calJac3.chr20 21550989 8 - 44557958 TTCTTCAT i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6364732 8 + 6628207 TTCTTCAT i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3347905 8 - 5917169 CTCTTCGT i cebCap1.NW_016107433v1 I 1 C 0 s dasNov3.JH569970 936093 8 + 1009443 TTGTTAGT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e macNem1.NW_012011355v1 14487009 0 + 26466322 C e rheMac8.chr20 21380728 0 - 74971481 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e manLeu1.NW_012101698v1 6811409 6684 - 7209941 T e chlSab2.chr5 58243990 0 + 75399963 C e cerAty1.NW_011999143v1 20813610 0 + 43916225 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=8184.000000 s hg38.chr16_GL383557v1_alt 68909 6 + 89672 TAAAAA- s panTro5.chr16 21500390 6 - 81586097 TAAAAA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561936 6 - 90481686 TAAAAA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794836 5 + 3010529 TAAAA-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912379 6 + 163208435 TAAAAA- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21093698 6 - 78541002 TAAAAA- i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6364740 6 + 6628207 TAAAAA- i saiBol1.JH378225 C 0 C 0 s dasNov3.JH569970 936101 6 + 1009443 -AAAAAA i dasNov3.JH569970 C 0 I 5776 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e macNem1.NW_012011355v1 14487009 0 + 26466322 C e rheMac8.chr20 21380728 0 - 74971481 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e manLeu1.NW_012101698v1 6811409 6684 - 7209941 T e chlSab2.chr5 58243990 0 + 75399963 C e cerAty1.NW_011999143v1 20813610 0 + 43916225 C e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=19524.000000 s hg38.chr16_GL383557v1_alt 68915 11 + 89672 GAAAAAAGTCT s panTro5.chr16 21500396 11 - 81586097 GAAAAAAGTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561942 11 - 90481686 GAAAAAAGTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794841 10 + 3010529 -AAAAAAGTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912385 11 + 163208435 GAAAAAAGTCT i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21093704 11 - 78541002 GAAAAAAGTCT i macFas5.chr20 C 0 T 365 s saiBol1.JH378225 6364746 11 + 6628207 GAAAAAAGTCA i saiBol1.JH378225 C 0 I 2 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e macNem1.NW_012011355v1 14487009 0 + 26466322 C e rheMac8.chr20 21380728 0 - 74971481 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e manLeu1.NW_012101698v1 6811409 6684 - 7209941 T e chlSab2.chr5 58243990 0 + 75399963 C e cerAty1.NW_011999143v1 20813610 0 + 43916225 C e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=50048.000000 s hg38.chr16_GL383557v1_alt 68926 11 + 89672 ggccaggcgcg s panTro5.chr16 21500407 11 - 81586097 ggccaggcgcg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561953 11 - 90481686 ggccaggcgcg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794851 11 + 3010529 ggccaggcgcg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912396 11 + 163208435 ggccaggcgcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380728 11 - 74971481 ggccggacgcg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093350 11 - 78541002 ggccggacgcg i macFas5.chr20 T 365 C 0 s macNem1.NW_012011355v1 14487009 11 + 26466322 ggccggacgcg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813610 11 + 43916225 ggccggacgca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58243990 11 + 75399963 ggccagacgca i chlSab2.chr5 C 0 C 0 s saiBol1.JH378225 6364759 11 + 6628207 ggccgggcgcg i saiBol1.JH378225 I 2 C 0 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e manLeu1.NW_012101698v1 6811409 6684 - 7209941 T e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=277788.000000 s hg38.chr16_GL383557v1_alt 68937 53 + 89672 gtggctcatgcctgtaatcctagcactttgggaggccgaggtgggcggattgc-- s panTro5.chr16 21500418 53 - 81586097 gtggctcatgcctgtaatcctagcactttgggaggccgaggtgggcagattgc-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21561964 53 - 90481686 gtggctcatgcctgtaatcctagcactttgggaggccgaggtgggcagattgc-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794862 53 + 3010529 gtggctcatgcctgtaatcctagcactttgggacgccgaggtgggcagattgc-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912407 53 + 163208435 gtggctcatgcctataatcctagcactttgggaggccgaggtgggcggattgc-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380739 51 - 74971481 gtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggat--c-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093361 51 - 78541002 gtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggat--c-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487020 51 + 26466322 gtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggat--c-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813621 51 + 43916225 gtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggat--c-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244001 51 + 75399963 gtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggat--c-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6804725 51 - 7209941 gtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggat--c-- i manLeu1.NW_012101698v1 T 6684 C 0 s saiBol1.JH378225 6364770 53 + 6628207 gtggctcaagcctgtaatcccagcactttgggaggccgaggcgggtggat--cac i saiBol1.JH378225 C 0 M 180 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=802933.000000 s hg38.chr16_GL383557v1_alt 68990 198 + 89672 ctgagctcaggagtt-caaggtcagcctgagcaacatggtgaaaccctgtctctatt-aaaataca--aaaattagc------------caggtgtggaggcacacacctgtaatcccag--ctactcaggaggctgagacaggagaatcatttgaacccgggaggctgaggttgcagtgagccgagatcgcgccactgcactctagcctgggtga s panTro5.chr16 21500471 198 - 81586097 ctgagctcaggagtt-caaggtcagcctgagcaacacggtgaaaccccgtctctatt-aaaataca--aaaattagc------------tgggtgtggaggcacacacctgtaatcccag--ctactcaggaggctcagacaggagaatcatttgaacccgggaggctgaggttgcagtgagccgagatcgcgccactgcactctagcctgggtga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562017 198 - 90481686 ctgagctcaggagtt-caaggtcagcctgagcaacacggtgaaaccccgtctctatt-aaaataca--aaaattagc------------cgggtgtggaggcacacacctgtaatcccag--ctactcaggaggctcagacaggagaatcatttgaacccgggaggctgaggttgcagtgagccgagatcgcgccactgcactctagcctgggtga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 794915 198 + 3010529 ctgagctcaggagtt-caaggtcagcctgagcaacatggtgaaaccccgtctctatt-aaaataca--aaaattagc------------tgggtgtggaggcacacgcctgtaatcccag--ctactcaggaggctgagacaggagaatcatttgaacccgggaggctgaggttgcagtgagccgagattgcgccactgcactctagcctgggtga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912460 198 + 163208435 ctgagctcaggagtt-caagatcagcctaagcaacacggtgaaaccccgtctctatt-aaaataca--aaaattagc------------cgggtgtggcggcacacacctgtaatcccag--ctactcaggaggctgagacaggagagtcatttgaacccgagaggcggagcttgcagtgagcagagatcgcgccactgcactctagcctgggtga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380790 202 - 74971481 acgaggtcaggagatgggagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaagaaaattagc------------caggcgtggtagtgggcacctgtagtcccag--ctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcgtgccaccgcactccagcccgggcga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093412 202 - 78541002 acgaggtcaggagatgggagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaagaaaattagc------------caggcgtggtagcgggcacctgtagtcccag--ctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcgtgccaccgcactccagcccgggcga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487071 204 + 26466322 acgaggtcaggagatgggagaccatcctggctaacacggtgaaaccccatctctaccaaaaatacaagaaaattagc------------caggcgtggtagcgggcacctgtagtcccagcactactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcgtgccaccgcactccagcccgggcga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813672 201 + 43916225 atgaggtcaggagat-ggagatcatcctggctaacacggtgaaaccccatctctactaaaaatacaagaaaattagc------------caggcgtggtagcaggcacctgtagtcccag--ctactcaggaggctgaggcagaagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcctgccaccgcactccagcccgggcga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244052 213 + 75399963 acgaggtcaggagat-ggagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaagaaaattagccaggcgtggtagcaggcgtggtagcaggcacctgtagtcccag--ctactcaggaggctgaggcagaaggatggcgtgaacccaggaggcagagcttgcagtgagctgagatcatgccaccgcactccagcccgggtga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6804776 201 - 7209941 atgaggtcaggagat-ggagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaagaaaattagc------------caggcgtggtagcaggcacctgtagtcccag--ctactcaggaggctgaggcagaagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcctgccaccgcactccagcccgggcga i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80481340 257 + 88915250 I e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e saiBol1.JH378225 6364823 180 + 6628207 M e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=6600.000000 s hg38.chr16_GL383557v1_alt 69188 1 + 89672 c s panTro5.chr16 21500669 1 - 81586097 c i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562215 1 - 90481686 c i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795113 1 + 3010529 c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912658 1 + 163208435 c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380992 1 - 74971481 c i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093614 1 - 78541002 c i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487275 1 + 26466322 c i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813873 1 + 43916225 c i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244265 1 + 75399963 c i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6804977 1 - 7209941 c i manLeu1.NW_012101698v1 C 0 C 0 s canFam3.chr5 80481597 1 + 88915250 C i canFam3.chr5 I 257 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e saiBol1.JH378225 6364823 180 + 6628207 M e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=7098.000000 s hg38.chr16_GL383557v1_alt 69189 1 + 89672 a s panTro5.chr16 21500670 1 - 81586097 a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562216 1 - 90481686 a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795114 1 + 3010529 a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912659 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380993 1 - 74971481 a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093615 1 - 78541002 a i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487276 1 + 26466322 a i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813874 1 + 43916225 a i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244266 1 + 75399963 a i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6804978 1 - 7209941 a i manLeu1.NW_012101698v1 C 0 C 0 s saiBol1.JH378225 6365004 1 + 6628207 a i saiBol1.JH378225 M 180 C 0 s canFam3.chr5 80481598 1 + 88915250 A i canFam3.chr5 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e mm10.chr8 22483698 1093 - 129401213 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=110292.000000 s hg38.chr16_GL383557v1_alt 69190 48 + 89672 gagtaagactttgt--ctcaaaaaaaaa---aaaaa-------aagaaaag-aaaagaaaA s panTro5.chr16 21500671 47 - 81586097 gagtaagacttcgt--ctc--aaaaaaa---aaaaa-------aagaaaagaaaaagaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562217 47 - 90481686 gagtaagacttcgt-ACTC--aaaaaaa---aaaaa-------aaaaaaaa-aaaagaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795115 38 + 3010529 gagtaagactttgt--ctc--aaaaaaa---aaaaa----------------aaaagaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912660 27 + 163208435 ga--aagacttcgt--ctc--aaa----------------------------aaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21380994 52 - 74971481 gagcgagactccac--ctc--aaaaaaa---taaaataaaat-aaaataaa-aaaataaaa i rheMac8.chr20 C 0 I 30 s macFas5.chr20 21093616 52 - 78541002 gagcgagactccac--ctc--aaaaaaa---taaaataaaat-aaaataaa-aaaataaaa i macFas5.chr20 C 0 I 30 s macNem1.NW_012011355v1 14487277 52 + 26466322 gagcgagactccac--ctc--aaGaaaa---taaaataaaat-aaaataaa-aaaataaaa i macNem1.NW_012011355v1 C 0 I 30 s cerAty1.NW_011999143v1 20813875 47 + 43916225 gagcgagactccac--ctc--aaa--------aaaataaaat-aaaataaa-aaaataaaa i cerAty1.NW_011999143v1 C 0 I 30 s chlSab2.chr5 58244267 53 + 75399963 gagcaagactccac--ctc--aaaaaaa---taaaattaaataaaaaaaaa-aaaaaaaaa i chlSab2.chr5 C 0 I 30 s manLeu1.NW_012101698v1 6804979 47 - 7209941 gagcgagactccac--ctc--aaaaaaa---taaaat------aaaataaa-aaaataaaa i manLeu1.NW_012101698v1 C 0 I 30 s saiBol1.JH378225 6365005 38 + 6628207 gagcgaaactccgt--ctc--aaaaaaa---aaaaa----------------aaaagaaaA i saiBol1.JH378225 C 0 C 0 s mm10.chr8 22484791 51 - 129401213 GAGTACAGCTTTGAGGCTC--TAAAGAACTCTAAAA-------CAGGAATG-CAAAGGAGG i mm10.chr8 I 1093 C 0 s canFam3.chr5 80481599 45 + 88915250 GATTAGTTTTTGAG--CTC--AAACAAA---TAAAA-------CAGGAAAA-ATCTTAGC- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54948836 1842 + 72247402 I e proCoq1.NW_012152729v1 2955834 1555 + 9850184 I e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e cebCap1.NW_016107433v1 3347913 0 - 5917169 C e colAng1.NW_012123265v1 551759 382 + 3907144 I e calJac3.chr20 21550997 0 - 44557958 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=4820.000000 s hg38.chr16_GL383557v1_alt 69238 2 + 89672 -TA s panTro5.chr16 21500718 2 - 81586097 -ga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562264 2 - 90481686 -ga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795153 2 + 3010529 -ga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912687 2 + 163208435 -aa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381076 2 - 74971481 -TA i rheMac8.chr20 I 30 C 0 s macFas5.chr20 21093698 2 - 78541002 -TA i macFas5.chr20 I 30 C 0 s macNem1.NW_012011355v1 14487359 2 + 26466322 -TA i macNem1.NW_012011355v1 I 30 C 0 s cerAty1.NW_011999143v1 20813952 2 + 43916225 -TA i cerAty1.NW_011999143v1 I 30 C 0 s chlSab2.chr5 58244350 2 + 75399963 -TA i chlSab2.chr5 I 30 C 0 s manLeu1.NW_012101698v1 6805056 2 - 7209941 -TA i manLeu1.NW_012101698v1 I 30 C 0 s colAng1.NW_012123265v1 552141 2 + 3907144 -TA i colAng1.NW_012123265v1 I 382 C 0 s calJac3.chr20 21550997 2 - 44557958 -TA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3347913 2 - 5917169 -TA i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54950678 2 + 72247402 -TA i micMur3.chr20 I 1842 C 0 s proCoq1.NW_012152729v1 2957389 2 + 9850184 -TA i proCoq1.NW_012152729v1 I 1555 C 0 s canFam3.chr5 80481644 2 + 88915250 TT- i canFam3.chr5 C 0 C 0 e mm10.chr8 22484842 0 - 129401213 C e dasNov3.JH569970 936107 5776 + 1009443 I e aotNan1.NW_018500622v1 9300898 11 - 10531588 I e saiBol1.JH378225 6365043 0 + 6628207 C e otoGar3.GL873566 13728496 2784 + 13852661 I a score=545188.000000 s hg38.chr16_GL383557v1_alt 69240 39 + 89672 AAAAGAAAAAAGTCTAATAAATTTCCAGGTCAT-GCCA----AT s panTro5.chr16 21500720 39 - 81586097 aaaagaaaaaAGTCTAATAAATTTCCAGGTCAT-GCCA----AT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562266 39 - 90481686 aaaagaaaaaaGTCTAATAAATTTCCAGGTCAT-GCCA----AT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795155 39 + 3010529 aaaagaaAAAAGTCTAATAAATTTCCAGGTCAT-GCCA----AT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912689 39 + 163208435 aaaaaaaaaaaGTCTAATAAATTTCCAGGTCAT-GCCA----AT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381078 39 - 74971481 AAAAGAAAAAAGTCTAATACATTTCCAGGTCAT-GCCA----AT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093700 39 - 78541002 AAAAGAAAAAAGTCTAATACATTTCCAGGTCAT-GCCA----AT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487361 39 + 26466322 AAAAGAAAAAAGTCTAATACATTTCCAGGTCAT-GCCA----AT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813954 39 + 43916225 AAAAGAAAAAAGTCTAATACATTTCCAGGTCAT-GCCA----AT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244352 39 + 75399963 AAAAGAAAAAAGTCTAATACATTTCCAGGTCAT-GCCA----AT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6805058 39 - 7209941 AAAAGAAAAAAGTCTAATATATTTCCAGGTCAT-GCCA----AT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552143 39 + 3907144 AAAGGAAAAAAGTCTAATACATTTCCAGGTCAT-GCCA----AT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21550999 43 - 44557958 AAAAGAAAAAAGTCTAATAAATTTCCAGGTCAT-GCCAATCTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365043 30 + 6628207 ---------AAGTCAAATAAATTTCCAGGTCAT-GCCA----AT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3347915 39 - 5917169 AAAAGAAAAAAGTCTAATAAATTTCCAGGTCAT-GCCA----AT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9300909 40 - 10531588 AAAAAAAAAAAATCTAATAAATTGCCAGGTCATGGCCA----AT i aotNan1.NW_018500622v1 I 11 C 0 s micMur3.chr20 54950680 39 + 72247402 AAAAGAAAAAAGTCCAGTAAATTTCCAGGTCCC-ACCA----AT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2957391 39 + 9850184 AAAAGAAAAAAGTCCAATAAATTTCCAGGTCAT-ACCA----AT i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22484842 37 - 129401213 --AAAACAAAAGTCTAGTAAATTTCCAGGTAAC-TCCA----AT i mm10.chr8 C 0 C 0 s canFam3.chr5 80481646 39 + 88915250 AAAAAAAAAAAGCCTGGTATTTTTTTGGGGCAT-CCCA----TT i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 936107 5776 + 1009443 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=4000472.000000 s hg38.chr16_GL383557v1_alt 69279 267 + 89672 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTACAATGATTCAAACTGCTGCCATG-AAACCCTATGCTCACCTTTAGCTGT-TTTACGTTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTTCCTGTGAGGAC---AA---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGACCTGCCCTGGAGATGATGGCAAAAGCC s panTro5.chr16 21500759 267 - 81586097 CTGCCTTGAATCTTCTAACTGCAGGGTGAACTGGCTCCTGTACAATGATTCAAACTGCTGCCGTG-AAACCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTTCCTGTGAAGAC---AA---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAGCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562305 267 - 90481686 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTACAATGATTCAAACTGCTGCCGTG-AAACCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTTCCTGTGAAGAC---AA---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAGCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795194 267 + 3010529 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTACAATGATTCAAACTGCTGCCATG-AAATCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTTCCTGTGAGGAC---AA---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAGCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912728 268 + 163208435 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTACAATGATTCAAACTGCTGCCATGAAAACCCTATGCTTACCTTTAGCTGT-TTTACATTGTAAACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTTCCTGTGAGGAC---AA---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381117 267 - 74971481 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGACGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21093739 267 - 78541002 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGACGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487400 267 + 26466322 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGACGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20813993 267 + 43916225 CTGCCTTGAATCTTGTAACTGCACGGTGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGACGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244391 267 + 75399963 CTGCCTTGAATCTTGTAACTGCAGGGTGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGACGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6805097 267 - 7209941 CTGCCTTGAATCTTGTAACTGCATGGTGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGACGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552182 267 + 3907144 CTGCCTTGAATCTTGTAACTGCAGGGCGAACTGGCTCCTGTAAAATGGTTCAAACTGCTGCCATT-AAGCCGTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGAACTGACTGCCAAAAGACACATGGCCTCCACCGTTCCTGTGAGGAC---AG---AACAGTTACATCTCTGAATTCACACAGTGTCCACAGCCAGCCCTGCCCTGGAGATGATGGCAAAAACC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551042 265 - 44557958 CTGCCTTGAATCTTTTAACTGCAGGGTGAACTGCCTCCTGTACAATGATTCAAACTGCTGCCGTG-AAACCCTATGCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCCAGCCAATTCCCATCTGCACTGACTGCCAAAAGACACATGGCCTCCACTGTCCCTGTGAAGAC---AG---AAGAGTTAGATCTCTGAATT--CACAGTGTCCACAGTCAGCCCTGCCCCGGATATGATGACAAAAGCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365073 263 + 6628207 CTGCCTTGAGTCGTTTAACTGCAGGGTGAACTGCCTCCTGTACAATGATTCAAACTGCTGCCATG-AAACCCTATGCTCACCTTTAGCTGT-TTTACATTGTAAACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTCCCTGTGAAGAA---AG---AAGAGTTGGATATCTGAATT----CAGTGTCCACAGCCAGCCCTGCCCTGGATATGATGGCAAAAGCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3347954 260 - 5917169 CTGCCTTGAATCTTTTAACTGCAGGGTAAACTGCCTCCTGTACAATGATTCAAACTGCTGCCATG-AAACCCTATCCTCACCTTTAGCTGT-TTTACATTGTAGACATGGACTCCAGCACTGGTACCTGATGCGGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTCCCTGTGAAAAC---AG---AAGAGTTAGATCTCTGAATT--CATAGTGTCCACAGCCAGCCCT-----GGATATGATGGCAAAAGCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9300949 262 - 10531588 CTGCCTTGAATCTTTTAACTGCAGGGTGAACTGC--TCCGTACAATGATTCAAACTGCTGCCATG-AAACCCTATGC-CACCTTTAGCTGTATTTACATT-TAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTCCCTGTGAAGAC---AG---AAGAATTAGATCTCTCAATT--CACAGTGTCCACAGCCAGCCCTGCCATGGATATGATGGCAAAAGCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54950719 266 + 72247402 CTGCTCTGAATCGTGTAACTGCAGGGT-AACTGTCTCCTGTACAATGATTCACACTTCT---ATG-AAAGCCTAAGCTCACCTTTAGCTGT-TTCACATTGTAGACGTGGACTCCAGCACTGGTCCCTGATGCAGCTAGCCAATTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACGGTCCCTGTGAGGATGGAAG---AACAGTTAGGTCTCTCAATTCATTCAGTGTCCACAGCCAGCCCTGCCCTGGAGACGATGGCAAAAGCC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2957430 266 + 9850184 CTGCCCTGAATTGTGTAATTGCAGGGC-AACGGCCTCCTGTACAATGATCCAAACGTCT---AGG-AAAGCCTACACTCACCTTTAGCTGT-TTTATATTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCCAGCCAATTCCCATCCGGACTGACTGCCAAAAGACACATGGCCTCCACTGTCCCTGTGAGGACGGAAG---AACAGTTAGGTCTCTCAATTCATTCAGTGTCCACAGCCACCCCTGCCCTGGGGACAATGGCAAAAGCC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22484879 254 - 129401213 CTGCCTCAAATCTTA-----ACATGACAAGCAGCCTCCCAT---ATGACTCAAACTGCTGCTATG-AGATCTGAGGCTCACCTTTAGATGA-TGCAGATCATATACGTGGACTCCAGCACTGGTACCCGATGCAGCTAGCCAGTTCCCATCTGGACTGACTGCCAAAAGACACATGGCCTCCACTGTACCTGTGAGGAC---AG---AAGAAACAAGGTCTTGAATTAGC----CACTCACAGCCTGCCCAGCCCTGGAGATGATGG-AAAGACC i mm10.chr8 C 0 C 0 s canFam3.chr5 80481685 250 + 88915250 CTCCCTGGATTTTGGAAACGGCAGAGCAAACACCTTTTTGT-------TTCCGGCCCCTAAAACG-GG-------GTTCCCTTTCAGTTTT-TTTATGTGGTACACAGGGCCTCCAGCATGGGTCCTTGAGGCACCCACCCATTTCCCTTTGGGATTTATTCCCAAAAGACACAGGGATTCCACGGTCCTGGGGCAGAC---GGGGTAACAGTAAATTTTTTGGATTTCCC---TGTTAATACCCAGTTTGGGCCGGAAGATAAA---AAAAGCC i canFam3.chr5 C 0 I 520 s dasNov3.JH569970 941883 265 + 1009443 CTGCCTTGCATCTTACAACTAAGGGGTGA-CTTCCTCCTGTATAGTGATTCAAACTGCTGCTACT-TAATCCTATGCTCACCTTTAGATGT-TTTATGCTGTAGACATGGACTCCAGCACTGGTACCTGATGCAGCTAGCCAATTTCCATCTGGACTGACTGCTAAAAGACACATGGCCTCCACTGTCCCTGTGAGAGC---AA---AAGAGGTGAGACTTTGAATTAGCCCAATACCTACAGCCAGCTCTGCCCTAG-GATGAAGGCAAAAGCC i dasNov3.JH569970 I 5776 C 0 e otoGar3.GL873566 13728496 2784 + 13852661 I a score=618636.000000 s hg38.chr16_GL383557v1_alt 69546 47 + 89672 -AAGGAGACCATT-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT s panTro5.chr16 21501026 47 - 81586097 -AAGGAGACCCTT-AGAGTTTTAAATCACTGCCAGGATAATTTACTGAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562572 48 - 90481686 -AAGGAGACCCTTAAGAGTTTTAAATCACTGCCAGGATAATTTACTGAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795461 47 + 3010529 -AAGGAGACCCTT-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53912996 47 + 163208435 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGAAAATTTGCTGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381384 47 - 74971481 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094006 47 - 78541002 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487667 47 + 26466322 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814260 47 + 43916225 -AAGGAGACCCTC-AAAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244658 47 + 75399963 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6805364 47 - 7209941 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552449 47 + 3907144 -AAGGAGACCCTC-AGAGTTTTAAATCACTGCCAGGATAATTTGCTGAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551307 47 - 44557958 -AAGGAGACTCTC-AGAGTTTTAAATCACTGCCAGGATAACTTTTTGAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365336 47 + 6628207 -AAGGAGACTCTC-GGAGTTTTAAATCACTGCCAGGATAATTTTTTAAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348214 47 - 5917169 -AAGGAGACTCTC-AGAGTTTTAAATCACTGCCAGGATAATTTTTTGAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301211 44 - 10531588 -AAGGAGA-TCTC-AGAGTTTTAAATCACTG-GAGGATAA-TTTTTGAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54950985 47 + 72247402 -AGTGAGACCCTC-AGAGTTTAAAACCACTGACAGGATAATTTGTTGAT i micMur3.chr20 C 0 I 389 s proCoq1.NW_012152729v1 2957696 47 + 9850184 -AGTGAGACCCTC-AGAGTTTTAAATCACCGACAGGATAATTTGTTGAT i proCoq1.NW_012152729v1 C 0 I 184 s mm10.chr8 22485133 46 - 129401213 -AGCAAGGCCCAC-GTGGCTATAAATCAATCACAGGAGAATTTACTGG- i mm10.chr8 C 0 C 0 s dasNov3.JH569970 942148 48 + 1009443 AATATAGGCTCTC-AGAAATTTAAATCACTGACATGGTAATTTCTTAAT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=379527.000000 s hg38.chr16_GL383557v1_alt 69593 33 + 89672 CACTGTGCAAATTACTTCTAGATGTTAATGTTT s panTro5.chr16 21501073 33 - 81586097 CACTGTGCAAATTACTTCTAGATGTTAATGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562620 33 - 90481686 CACTGTGCAAATTACTTCTAGATGTTAATGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795508 33 + 3010529 CACTGTGCAAATTACTTCTAGATGTTAATGTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913043 33 + 163208435 CACTGTGCAAATTACTTCTAGATGTTAATGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381431 33 - 74971481 CACTGTGCAAATTAGTTCTAGATGCTAATGTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094053 33 - 78541002 CACTGTGCAAATTAGTTCTAGATGCTAATGTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487714 33 + 26466322 CACTGTGCAAATTAGTTCTAGATGCTAATGTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814307 33 + 43916225 CACTGTGCAAATTAGTTCTAGATGCTAATGTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244705 33 + 75399963 CACTGTGCAAATTAGTTCTAGATGTTAATGTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6805411 33 - 7209941 CACTGTGCAAATTAGTTCTAGATGCTAATGTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552496 33 + 3907144 CACTGTGCAAATTAGTTCTAGATGTTAATGTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551354 33 - 44557958 CACTGTGCAAATTAGTTCTAGATGTTTATGTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365383 33 + 6628207 CACTGTGCAAATTAGTTCTAGATGTTAATGTGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348261 33 - 5917169 CACTGTGCAAATTAGTTCTAGATGTTAATGTGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301255 33 - 10531588 CACTGTGCAAATTAGTTCTAGATATTAATGTGT i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22485179 33 - 129401213 AGTTTTGCAAATTAGTTCTAAAGGTTAACCTGT i mm10.chr8 C 0 C 0 s dasNov3.JH569970 942196 33 + 1009443 AGTTTTGTAAATAAGTTCTAAATGTTGCTCTGC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e proCoq1.NW_012152729v1 2957743 184 + 9850184 I e otoGar3.GL873566 13728496 2784 + 13852661 I a score=108075.000000 s hg38.chr16_GL383557v1_alt 69626 8 + 89672 CTACTTTT s panTro5.chr16 21501106 8 - 81586097 CTACTTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562653 8 - 90481686 CTACTTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795541 8 + 3010529 CTACTTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913076 8 + 163208435 CTACTTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381464 8 - 74971481 CTACTTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094086 8 - 78541002 CTACTTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487747 8 + 26466322 CTACTTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814340 8 + 43916225 CTACTTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244738 8 + 75399963 CTACtttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6805444 8 - 7209941 CTACTTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552529 8 + 3907144 CCACTTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551387 8 - 44557958 CTACTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365416 8 + 6628207 CTACTTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348294 8 - 5917169 CTACTTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301288 8 - 10531588 CTACTTTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13731280 8 + 13852661 CTGTCTTT i otoGar3.GL873566 I 2784 C 0 s mm10.chr8 22485212 8 - 129401213 TTATTTCT i mm10.chr8 C 0 I 549 s dasNov3.JH569970 942229 8 + 1009443 CTGCCTTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e proCoq1.NW_012152729v1 2957743 184 + 9850184 I a score=14742.000000 s hg38.chr16_GL383557v1_alt 69634 3 + 89672 TTC s panTro5.chr16 21501114 3 - 81586097 TTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562661 3 - 90481686 TTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795549 3 + 3010529 TGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913084 3 + 163208435 TTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381472 3 - 74971481 TTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094094 3 - 78541002 TTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487755 3 + 26466322 TTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814348 3 + 43916225 TTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58244746 3 + 75399963 ttc i chlSab2.chr5 C 0 I 304 s manLeu1.NW_012101698v1 6805452 3 - 7209941 TTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552537 3 + 3907144 TTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551395 3 - 44557958 TCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365424 3 + 6628207 TCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348302 3 - 5917169 TCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301296 3 - 10531588 CTA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13731288 3 + 13852661 CTT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 942237 1 + 1009443 T-- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957743 184 + 9850184 I a score=621996.000000 s hg38.chr16_GL383557v1_alt 69637 66 + 89672 ATCTAC-TTATTTAACCATCCCGCCTGTAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC s panTro5.chr16 21501117 66 - 81586097 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562664 66 - 90481686 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795552 66 + 3010529 ATCTAC-TTATTTAGCCATCCTGCCTATAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913087 66 + 163208435 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381475 66 - 74971481 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAGGGTCCAGAGAGATAAAACAGAAGTTATTAGTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094097 66 - 78541002 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAGGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487758 66 + 26466322 ATCTAC-TTATTTAGCCATCCCACCTGTAAAGAGGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814351 66 + 43916225 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAAGGTCCAGAGACATAAAACAGAAGTTATTACTTC i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6805455 66 - 7209941 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552540 66 + 3907144 ATCTAC-TTATTTAGCCATCCCGCCTGTAAAGAAGGTCCAGAGAGATAAAACAGAAGTTATTACTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551398 63 - 44557958 ATCTAA-TTATTGAGCCATCCCTCATGTAAAGA---TCCAGAGAGATAAAACAGAAGTTATTACTTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365427 61 + 6628207 ATCTAA-TTATTTAGCCATCCCTCATGTAAAGA---TTC--AGAGATAAAAAAGAAGTTATTACTTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348305 63 - 5917169 ATCTAA-TTATTTAGCCATCCTGCATGTAAAGA---TCCAGAGAGATAAAACAGAAGTTATTACTTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301299 64 - 10531588 CTCTAATTTAGTTAGCCATCCCTCATGTAAAGA---TCCAGAGAGATAAAACAGAAGTTATTACTTG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13731291 64 + 13852661 TTTCAT-TTAATTAGCCACCTTTTATGTAAAGAGAATCC--AGAGATAAAACTGAAGGTATTAGCTC i otoGar3.GL873566 C 0 I 19 s dasNov3.JH569970 942238 65 + 1009443 -TTCAT-TTCTTCAGCCATCCCTCCTATAAAGAGTAACCAGAGAGATAAAGCTGAAGACATCATTTG i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957743 184 + 9850184 I e chlSab2.chr5 58244749 304 + 75399963 I a score=640663.000000 s hg38.chr16_GL383557v1_alt 69703 71 + 89672 CTCAGGCC----TAAGACACTGCTTACTACAGGAATAGAGAATGACGGCAGCATCTGCCACTAAAATATATACTT s panTro5.chr16 21501183 71 - 81586097 CCCAGGCC----TAAGACACTGCTTACTACAGGAATAGAGAATGACGGCAGCATCTGCCACTAAAATATATACTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562730 71 - 90481686 CCCAGGCC----TAAGACACTGCTTACTACAGGAATAGAGAATGACGGCAGCATCTGCCACTAAAATATATACTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795618 71 + 3010529 CTCAGGCC----TAAGACACTGCTTACTACAGGAATAGAGAATGACGGCAGCATCTGCCACTAAAATATATACTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913153 70 + 163208435 CTCAGGCC----TAAGACATTGCTTACTATAGGAATAGAGAATGACGGCAGCATCTGCCACTAAAACATACACT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381541 71 - 74971481 CTCAGGCC----TAAGACACTGCTTACTATAGGAATAGAGAATCACAGTAGCATCTGCCACTAAAATACATACTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094163 71 - 78541002 CTCAGGCC----TAAGACACTGCTTACTATAGGAATAGAGAATCACAGTAGCATCTGCCACTAAAATACATACTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487824 71 + 26466322 CTCAGGCC----TAAGACACTGCTTACTATAGGAATAGAGAATCACAGTAGCATCTGCCACTAAAATACATACTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814417 71 + 43916225 CTCAGGCC----TAAGACACTGCTTACTATAGGAATAGAGAATCACAGCAGCATCTGCCACTAAAATACATACTT i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6805521 71 - 7209941 CTCAGGCC----TAAGACACTGCTTACTATAGGAATAGAGAATCACAGCAGCATCTGCCACTAAAATACATACTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552606 71 + 3907144 CTCAGGCC----TAAGACACTGCTTACTATAGGAATAGAGAATCACAGTAGCATCTGCCACTGAAATACATACTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551461 70 - 44557958 CTCAGGCC----TAAGACACTGCTTACTATGGGAATAGAGAATCATGGCAGCATCTGCCACTAAAATATATACT- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365488 70 + 6628207 CTCAGGCC----TAAGACACTGCTTACTATGGGAATAGAGAATCATGGTAGCATCTGCCACTAAAATATATACT- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348368 70 - 5917169 CTCAGGCC----TAAGGCACTGCTTACTATGGGAATAGAGAACCATGGTAGCATCTACCACTAAAATATATACT- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301363 68 - 10531588 CTCAGG-C----TAAGACACTGCTTACTATGGGAATAGAGAATCATGGTAGCATGTGCCACTAAAATATATAC-- i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 942303 75 + 1009443 CTCAGGTCTGAGTAAGAACTTCCCTAGTATAATAATGGAGAATCAGGGTAGCATTTATCACTAAAATCTATCGTT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957743 184 + 9850184 I e chlSab2.chr5 58244749 304 + 75399963 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=287487.000000 s hg38.chr16_GL383557v1_alt 69774 28 + 89672 -----TAATTGTTTCAAACTCCTTTCCTACCAA s panTro5.chr16 21501254 28 - 81586097 -----TAATTGTTTCAAACTCCTTTCCTACCAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562801 28 - 90481686 -----TAATTGTTTCAAACTCCTTTCCTACCAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795689 28 + 3010529 -----TAATTGTTTCAAACTCCTTTCCTACCAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913223 25 + 163208435 --------TTGTTACAAACTCCTTTCCTACCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381612 28 - 74971481 -----TAACTGTTTCAAACTCCTTTCCTACCAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094234 28 - 78541002 -----TAACTGTTTCAAACTCCTTTCCTACCAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487895 28 + 26466322 -----TAACTGTTTCAAACTCCTTTCCTACCAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814488 28 + 43916225 -----TAACTGTTTCAAACTCCTTTCCTACCAA i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6805592 28 - 7209941 -----TAACTGTTTCAAACTCCTTTCCTACCAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552677 28 + 3907144 -----TAACTGTTTCAAACTCCTTTCCTACCAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551531 27 - 44557958 ------AATTGTTTCAAACTCCTTTCCTACCTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365558 27 + 6628207 ------AATTGTTTCAAACTCCTTTCCTACCAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348438 27 - 5917169 ------AATTGTTTCAAACTCCTTTCCTACCAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301431 24 - 10531588 ---------TGTTTCAAACTCCTTTCCTACCAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2957927 28 + 9850184 -----TAATTGTTTCGAACTCCTTTCCTACCAA i proCoq1.NW_012152729v1 I 184 I 147 s dasNov3.JH569970 942378 33 + 1009443 TAAACTAGTTGTTTCAAACACTTTTCTTACCAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e chlSab2.chr5 58244749 304 + 75399963 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=10920.000000 s hg38.chr16_GL383557v1_alt 69802 1 + 89672 A s panTro5.chr16 21501282 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562829 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795717 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913248 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381640 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094262 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487923 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814516 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6805620 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552705 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551558 1 - 44557958 A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365585 1 + 6628207 A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348465 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 I 484 s aotNan1.NW_018500622v1 9301455 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 942411 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e chlSab2.chr5 58244749 304 + 75399963 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=-63731.000000 s hg38.chr16_GL383557v1_alt 69803 7 + 89672 TGG-TTt---------t s panTro5.chr16 21501283 8 - 81586097 TGGTTtt---------t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562830 8 - 90481686 TGGtttt---------t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795718 7 + 3010529 TGG-ttt---------t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913249 8 + 163208435 TGGtttt---------t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381641 5 - 74971481 CG--ttt---------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094263 5 - 78541002 CG--ttt---------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487924 5 + 26466322 CG--ttt---------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814517 4 + 43916225 C---ttt---------- i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6805621 4 - 7209941 Ct--tt----------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552706 10 + 3907144 CA--Gttttttg----- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551559 7 - 44557958 ----------TGTTTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365586 2 + 6628207 ----------Ta----- i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9301456 7 - 10531588 ----------TGTTTTT i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 942412 7 + 1009443 AGGTTTT---------- i dasNov3.JH569970 C 0 I 4 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e chlSab2.chr5 58244749 304 + 75399963 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=7644.000000 s hg38.chr16_GL383557v1_alt 69810 4 + 89672 tttt s panTro5.chr16 21501291 4 - 81586097 tttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562838 4 - 90481686 tttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795725 4 + 3010529 tttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913257 4 + 163208435 tttt i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21551566 4 - 44557958 TTTT i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9301463 4 - 10531588 TTTT i aotNan1.NW_018500622v1 C 0 I 475 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e macNem1.NW_012011355v1 14487929 0 + 26466322 C e rheMac8.chr20 21381646 0 - 74971481 C e macFas5.chr20 21094268 0 - 78541002 C e colAng1.NW_012123265v1 552716 0 + 3907144 C e manLeu1.NW_012101698v1 6805625 0 - 7209941 C e chlSab2.chr5 58244749 304 + 75399963 I e cerAty1.NW_011999143v1 20814521 0 + 43916225 C e saiBol1.JH378225 6365588 0 + 6628207 C e otoGar3.GL873566 13731355 19 + 13852661 I a score=1808.000000 s hg38.chr16_GL383557v1_alt 69814 2 + 89672 ct s panTro5.chr16 21501295 2 - 81586097 ct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562842 2 - 90481686 ct i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795729 2 + 3010529 ct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913261 2 + 163208435 tt i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21551570 2 - 44557958 TT i calJac3.chr20 C 0 I 139 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e macNem1.NW_012011355v1 14487929 0 + 26466322 C e rheMac8.chr20 21381646 0 - 74971481 C e macFas5.chr20 21094268 0 - 78541002 C e colAng1.NW_012123265v1 552716 0 + 3907144 C e manLeu1.NW_012101698v1 6805625 0 - 7209941 C e chlSab2.chr5 58244749 304 + 75399963 I e cerAty1.NW_011999143v1 20814521 0 + 43916225 C e saiBol1.JH378225 6365588 0 + 6628207 C e otoGar3.GL873566 13731355 19 + 13852661 I a score=-1846.000000 s hg38.chr16_GL383557v1_alt 69816 8 + 89672 gttttttg s panTro5.chr16 21501297 8 - 81586097 gttttttg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562844 6 - 90481686 gttttt-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795731 4 + 3010529 gttt---- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913263 7 + 163208435 ttttttt- i nomLeu3.chr2 C 0 C 0 s saiBol1.JH378225 6365588 1 + 6628207 ---t---- i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e macNem1.NW_012011355v1 14487929 0 + 26466322 C e rheMac8.chr20 21381646 0 - 74971481 C e macFas5.chr20 21094268 0 - 78541002 C e colAng1.NW_012123265v1 552716 0 + 3907144 C e manLeu1.NW_012101698v1 6805625 0 - 7209941 C e chlSab2.chr5 58244749 304 + 75399963 I e cerAty1.NW_011999143v1 20814521 0 + 43916225 C e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=736791.000000 s hg38.chr16_GL383557v1_alt 69824 138 + 89672 ttttttttttttttgagatggagtctagctctgtcactcgggctggagtgcagtggcg-ga--tccgctcactccaacctccaactcccaaattcaagtgattcacccgcctcagcctcctgactagctgggattacaggc s panTro5.chr16 21501305 137 - 81586097 -tttttttttttttgagatggagtctagctctgtcactcgggccggagtgcagtggcg-ga--tccgctcacttcaacctccaactcccaaattcaagtgattcacccgcctcagcctcctgactagctgggattacaggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562850 137 - 90481686 -gttttttttttttgagatggagtctagctctgtcactcgggccggagtgcagtggcg-ga--tccgctcactccaacctccaactcccaaattcaagtgattcacccgcctcagcctcctgactagctgggattacaggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795735 137 + 3010529 -tgttttttgttttgagatggagtctagctctgtcactcgggctggagtgcagtggcg-ga--tccgctcactccaacctccaactcccaaattcaagtgattcacccgcctcagcctcctgactagctgggattacaggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913270 139 + 163208435 -tttttttttttttgaaatggagtctagctctgtcacccgggctggagtgcagtggcg-gatctccgctcacgccaacctccagctcccaaattcaagtgattcacctgcctcagcctcctgactagctgagattacaggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381646 140 - 74971481 ttttgtttgtttttgagacacagtctcgctctgtcacccgggctggaatgcagtggtg-gatctccgctcactccaacctccaactcccgaattcaagtgattcacctgcctcagcctcccaagtagctgggattacaggc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094268 140 - 78541002 ttttgtttgtttttgagacacagtctcgctctgtcacccgggctggaatgcagtggtg-gatctccgctcactccaacctccaactcccgaattcaagtgattcacctgcctcagcctcccaagtagccgggattacaggc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14487929 140 + 26466322 ttttgtttgtttttgagacacagtctcgctctgtcacccgggctggaatgcagtggtg-gatctccgctcactccaacctccaactcccgaattcaagtgattcacctgcctcagcctcccaagtagctgggattacaggc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814521 140 + 43916225 ttttgtttgtttttgagacacagtctcgctctgtcacccgggctggaaagcagtgatg-gatctccgctcactccaacctccaactcccgaattcaagtgattcacctgcctcagcctcccaagtagctgggattacaggc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58245053 140 + 75399963 ttttttttttttttgagacggagcctcactctgtca-tcaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccaggttcaagccattctcttgcctcagcctcccaagtagctgggattacaggc i chlSab2.chr5 I 304 C 0 s manLeu1.NW_012101698v1 6805625 140 - 7209941 ttttgtttgtttttgagacacagcctcgctctgtcacccgggctggaatgcagtggtg-gatctccgctcactccaacctccaactcccgaattcaagtgattcacctgcctcagcctcccaagtagctgggattacaggc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 552716 131 + 3907144 ---------tttttgagacagagtctcgctctgtcacccgggctggaacgcagtggcg-gatctccgctcactccaacctccaactcccgaattcaagtgattcacctgcctcagcctcccaagaagctgggattacaggc i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6365589 109 + 6628207 tttttttttttttaaagatgaggtttcaccatgttggtcaggctgg-------------------------------tcttgaactcctgacctcaggtgatctgcccaacttggcctccaaagt-gcttggattacaggc i saiBol1.JH378225 C 0 I 174 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=888132.000000 s hg38.chr16_GL383557v1_alt 69962 157 + 89672 acccaccaccatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccgcccaccttggcctcc---------caaagtgctgggattacaggcgtgagccaccgtgcctggccTC s panTro5.chr16 21501442 157 - 81586097 acccacaaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccgcccaccttggcctcc---------caaagtgctgggattacaggcgtgagccaccgtgcctggccTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21562987 157 - 90481686 acccaccaccatgcctggctaatttttgtatttttagtagagacagggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccgcccaccttggcctcc---------caaagtgctgggattacaggcgtgagccaccgtgcctggccTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 795872 157 + 3010529 acccaccaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccgcccaccttggcctcc---------caaagtgctgggattacaggcgtgagccaccgcgcctggccTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913409 166 + 163208435 gcccaccaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatcctcccaccttggcctcccaaagtgctcaaagtgctggggttacaggagtgagccaccacgcctggccTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21381786 157 - 74971481 gcccaccatcatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccacctaccttggcctcc---------caaagcggtgggattacaggcgtgagccaccacgcccagcctt i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21094408 157 - 78541002 gcccaccatcatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccacctaccttggcctcc---------caaagcagtgggattacaggcgtgagccaccacgcccggcctt i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14488069 155 + 26466322 gcccaccatcatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagacgatccacctaccttggcctcc---------caaagcggtgggattacaggcgtgagccaccacgcccggcc-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814661 156 + 43916225 gcccaccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactactgacctcagatgatccacctaccttggcctcc---------caaagcggtgggattacaggcgtgagccaccacgcccggcc-t i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58245193 157 + 75399963 gcccaccaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactgctgatctcagatgatccacctaccttggcctcc---------caaagcggtgggattacaggcgtgaaccatcacgcccggcctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6805765 157 - 7209941 gcccaccaccacgaccggctaatttttgtatttttagtagagacagggtttcaccatgttggctgggctggtcttgaactactgacctcagatgatccacctaccttggcctcc---------caaagcggtgggattacaggcgtgagccaccacgcccggcctt i manLeu1.NW_012101698v1 C 0 I 6660 s colAng1.NW_012123265v1 552847 157 + 3907144 gcccaccaccacgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggctgggctggtcttgaactcctgacctcagatgatccacctactttggcctcc---------caaagtgctgggattacagctgtgagccaccacacccggccCC i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e saiBol1.JH378225 6365698 174 + 6628207 I e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=880770.000000 s hg38.chr16_GL383557v1_alt 70119 167 + 89672 tttcttttttct------------ttttttagacggagtctcactctgttgtcaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctctcgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcgtg------------------caccaccacacccagctaatt s panTro5.chr16 21501599 167 - 81586097 tttcttttttct------------ttttttagacagagtctcactctgttgtcaggctggagtgcagtggtgcaatctcggcttactgcaacctctgcctctcgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcgtg------------------caccaccacacccagctaatt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563144 167 - 90481686 tttcttttttct------------ttttttagacagagtctcactctgttgtcaggctggagtgcagtggtgcaatctcggcttactgcaacctctgcctctcgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcgtg------------------caccaccacacccagctaatt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796029 167 + 3010529 tttcttttttct------------ttttttagacggagtctcactctgttgtcaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcatctcgggttcaagccattctcctgcctcagcctcccaagtagctgggactacaggcgtg------------------caccaccacacccagctaatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53913575 179 + 163208435 tttcttttttttttttgttttttgttttttagacggagtctcactctgttgtcaggctggggtgcagtggtgcaatttcagctcactgcaacctctgcctctcaagttcaagccattctcctgcctcaacctcccaagtaactgggactacaggcgtg------------------caccaccacacccagataatt i nomLeu3.chr2 C 0 M 959 s rheMac8.chr20 21381944 167 - 74971481 tttttttttttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggcacaatcttggctcactgcaacctcggccgccgagggagagggccttcgcttgcctcaacctcccaaaaaactgggactacgggcggg------------------caccaccacgcccagctaatt i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21094566 184 - 78541002 tttttttttttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcctgggctcaagcaattc-cctgcctcagcctcccgagtagctgggattacaggagtagctggatttacaagtgcccgccaccatacccagctattt i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14488224 160 + 26466322 -------ttttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccaggttcaagccattctcttgcctcagcctcccaagtagctaggactacagatgtg------------------caccaccacgcccagctaatt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814818 167 + 43916225 tttttttttttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggtacaatcttggctcactgcaacctctgcctcccaggttcaagccattctcttgcctcagcctcccaagtagctaggactacaggcgtg------------------caccaccacgcccagctaatt i cerAty1.NW_011999143v1 I 1 C 0 s chlSab2.chr5 58245350 166 + 75399963 -ttttttttttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccaggttcaagccattctcttgcctcagcctcccaagtagctgggactacaggcgtg------------------caccaccacacccagctaatt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6812582 167 - 7209941 tttttttttttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggcacaatcttggctcactacaacctctgcctcccaggttcaagccattctcttgcctcagcctcccaagtagctaggactacaggcgtg------------------caccaccacgcccagctaatt i manLeu1.NW_012101698v1 I 6660 C 0 s colAng1.NW_012123265v1 553004 165 + 3907144 --Ctttttcttt------------tttttgagacggagtctcactctgtcatcaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcccaggttcaagccattctcttgcctcagtctcccaagtagctgggactacaggcgtg------------------caccaccatgcccagctaatt i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e saiBol1.JH378225 6365698 174 + 6628207 I e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=515241.000000 s hg38.chr16_GL383557v1_alt 70286 105 + 89672 tttgtatatttagtagagatggggtttcaccattttggtcagcatggtctcgatctcttgaccttatgatctgcccacctcggcctccaaaagtgctggg-----aggtg s panTro5.chr16 21501766 110 - 81586097 tttgtatatttagtagagatggggtttcaccattttggccagcatggtctcgatctcttgaccttatgatctgcccacctcggcctcccaaagtgctgggattacaggtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563311 110 - 90481686 tttgtatatttagtagagatggggtttcaccattttggccagcatggtctcgatctcttgaccttatgatctgcccaccttggcctcccaaagtgctgggattacaggtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796196 110 + 3010529 tttgtatatttagtagagatggggtttcaccattttggccagcatggtcttgatctcttgaccttatgatctgcccaccttggcctcccaaagtgctgggattacaggtg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21382111 110 - 74971481 tttgcatatttagtagagatggggtttcaccatgttggccagcatggtctcgatctcttgacctcatgatctgcccgccacggactcccaaagtgctgggattacaggcg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094750 110 - 78541002 tttgtatttttagtagagacagggtttcaccatgttggccaggatggtctcgatctcttgacctcatgatctgcccgccacggactcccaaagtgctgggattacaggcg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488384 110 + 26466322 tttgcatatttagtagagatggggtttcaccatgttggccagcatggtctcgatctcttgacctcatgatctgcccgccacggactcccaaagtgctgggattacaggcg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20814985 110 + 43916225 tttgcatatttagtagagatggggtttcaccatgttggccagcatggtctcgatctcttgacctcatgatctgcctgccacggactcccaaagtgctgggattacgggcg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58245516 110 + 75399963 tttgcatatttagtagagatggggtttcaccatgttggccagcatggtctcgatctcttgacctcatgatctgcccgcctcggactctcaaagtgctgggattacaggcg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6812749 110 - 7209941 tttgcatatttagtagagatggggtttcaccatgttggccagcatggtctcgatctcttgacctcatgatctgcctgccacggactcccaaagtgctgggattacaggcg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553169 110 + 3907144 tttgcatatttagtagagatggggtttcaccatgttggccagcatggtctcgatctcttgacctcatgatctgcctgcctcggactcccaaagtgctgggattacaggtg i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e saiBol1.JH378225 6365698 174 + 6628207 I e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I e nomLeu3.chr2 53913754 959 + 163208435 M a score=162408.000000 s hg38.chr16_GL383557v1_alt 70391 36 + 89672 tgagccactgtgcccggccCCTAAA-TTTTTTTTAAG s panTro5.chr16 21501876 35 - 81586097 taagccactgtgcccggccCCCAAA--TTTTTTTAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563421 35 - 90481686 tgagccactgtgcccggccCCCAAA--TTTTTTTAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796306 36 + 3010529 tcagccactgtgcccggccCCCAGA-TTTTTTTTAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53914713 36 + 163208435 TGAGCCACTGTGCCTGGCCCCAAAA-TTTTTTTTAAA i nomLeu3.chr2 M 959 C 0 s rheMac8.chr20 21382221 36 - 74971481 tgagtcaccgtgtccggccCCAAAT-TTTTTTTTAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094860 36 - 78541002 tgagtcaccgtgtccggccCCAAAT-TTTTTTTTAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488494 36 + 26466322 tgagtcaccgtgtctggccCCAAAT-TTTTTTTTAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815095 36 + 43916225 tgagtcaccgagtccggccCCAAAT-TTTTTTTAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58245626 36 + 75399963 tgagtcaccgtgcctggccCCAAAT-TTTTTTTTAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6812859 36 - 7209941 tgagtcaccgtgtccggccCCAAAT-TTTTTTTAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553279 37 + 3907144 tgagtcactgtgcctagccCCAAATGTTTTTTTTAAA i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e saiBol1.JH378225 6365698 174 + 6628207 I e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=2308.000000 s hg38.chr16_GL383557v1_alt 70427 1 + 89672 C s panTro5.chr16 21501911 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563456 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796342 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53914749 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382257 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094896 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488530 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815131 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58245662 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6812895 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553316 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6365872 1 + 6628207 c i saiBol1.JH378225 I 174 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e calJac3.chr20 21551572 139 - 44557958 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=494304.000000 s hg38.chr16_GL383557v1_alt 70428 68 + 89672 CAAAATTATGGACAggccaggcgtggtagctcacacctgtaatcccagcactttgggaggcagaggta s panTro5.chr16 21501912 68 - 81586097 CAAAATTATGGACAggccaggcgtggtagctcacacctgtaatcccagcactttgggaggcagaggta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563457 68 - 90481686 CAAAATTATGGACAggccaggcgtggtagctcacacctgtaatcccagcactttgggaggcagaggta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796343 68 + 3010529 CAAAATTATGGACAggccaggcgtggtagctcacacctgtaatcccagcactttgggaggcagaggta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53914750 68 + 163208435 CAAAATTATGGACAggccaggtgtggtagctcacacctgtaatcccagcactttgggaggcggaggta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382258 68 - 74971481 CAAAATTATGGACAggccaggtgtggtggcgcacacctataatcccagcactttgggaggcggaggta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094897 68 - 78541002 CAAAATTATGGACAggccaggtgtggtggcgcacacctataatcccagcactttgggaggcagaggta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488531 68 + 26466322 CAAAATTATGGACAggccaggtgtggtggcgcacacctgtaatcccagcactttgggaggtggaggta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815132 68 + 43916225 CAAAATTATGGACAggccaggtgtggtggcgcacacctgtaatcccagcactttgggaggcggaggta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58245663 68 + 75399963 CAAAATTATGGACAggccaggtgtggtggcgcacacctgtgatcccagcactttgggaggcggaggta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6812896 68 - 7209941 CAAAATTATGGACAggccaggtgtggtggcgcacacctgtaatcccagcactttgggaggcggaggta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553317 68 + 3907144 CAAAATTATGGACAggccaggtgtggtggtgcacacctgtaatcccagcactttggtaggcggaggta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551711 62 - 44557958 caaaatt------aggccaggcgcagtggctcatgcctgtgatcccagcactctgggaggccaaggcg i calJac3.chr20 I 139 C 0 s saiBol1.JH378225 6365873 62 + 6628207 caaaatt------aggccaggcacagtggctcatgcctgtaatcccagcactctgggaggccaaggag i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e otoGar3.GL873566 13731355 19 + 13852661 I a score=1669644.000000 s hg38.chr16_GL383557v1_alt 70496 228 + 89672 ggtggattacc--------tgaggtcaggagttcaagaccagcctggccaagatggtgaaa-ccccatctctactaagagtac--aaaaaaaaaatagctgggcgtggttgtgggtgcctgtaatcccagctactagggaggctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccgagatggcaccaatgcactccagcctgggc-aca-a---gaaactctgtctt s panTro5.chr16 21501980 228 - 81586097 ggtggattacc--------tgaggtcaggagttcaagaccagcctggccaagatggtgaaa-ccccatctctactaagagtac--aaaaaaaaaatagctgggcatggttgtgggtgcctgtaatcccagctactagggaggctgagg----------------caggagaatcacttgaacctgggaggcaaa-gttgcagtgagccgagatggcaccaatgcactccagcctgggcaaca-a---gaaactctgtctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563525 228 - 90481686 ggtggattacc--------tgaggtcaggagttcaagaccagcctggccaagatggtgaaa-ccccatctctactaagagtac---aaaaaaaaatagctgggcgtggttgtgggtgcctgtaatcccagctactagggaggctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggcaccaatgcactccagcctgggcaaca-a---gaaactctgtctT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796411 230 + 3010529 ggtggattacc--------tgaggtcaggagttcaagaccagcctggccaagatggtgaaa-ctccatctctactaagagtacaaaaaaaaaaaatagctgggcgtggttgtgggtgcctgtaatcccagctactagggaggctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgtagtgagccgagatggcaccaatgcactccagcctgggc-aaa-a---gaaactctgtctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53914818 229 + 163208435 ggtggatcacc--------tgaggtcaggagttcaagaccagcctggccaagatggtgaaa-ccccatctctactaagagtac--aaaaaaaaattagctgggcgtggttgtgggtgcctgtaatcccagctactcgggagggtgagg----------------caggagaatcacttgaacctgggaggcaaaggttacagtgagccgagatggcaccaacgcactccagcctgggcgaca-a---gaaactctgtctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382326 229 - 74971481 ggtggatcacc--------tgaggtcaagagttcgagaccagcctggccaagatggtgaaacccccatctccactaagagtac--aaaaaaaatttagctgggcgtgatggcaggtgcctgtaatcccagctactt-ggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggtgccaatgtactccagcctgggcgaca-a---gaaactccatctT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21094965 229 - 78541002 ggtggatcacc--------tgaggtcaagagttcgagaccagcctggccaagatggtgaaacccccatctccactaagagtac--aaaaaaaatttagctgggcgtgatggcaggtgcctgtaatcccagctactt-ggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggtgccaatgtactccagcctgggcgaca-a---gaaactccatctT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488599 229 + 26466322 ggtggatcacc--------tgaggtcaagagttcgagaccagcctggccaagatggtgaaacccccatctccactaagagtac--aaaaaaaatttagctgggcgtgatggcaggtgcctgtaatcccagctactt-ggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggtgccaatgtactccagcctgggcgaca-a---gaaactccatctT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815200 230 + 43916225 ggtggatcacc--------tgaggtcaagagttcgagaccagcctggccaagatggtgaaacccccatctccactaagagtac--aaaaaaaatttagctgggcgtgatggcaggtgcctgtaatcccagctacttgggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggtgccaatgtactccagcctgggtgaca-a---gaaactccatctT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58245731 238 + 75399963 ggtggatcacctgagggggtgaggtcaagagttcgagaccagcctggccaagatggtgaaacccccatctccactaagagtac--agaaaaaatttagctgggcgtgatggcaggtgcctgtaatcccagcgacttgggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggtgccaatgtactccagcctgggtgacg-a---aaaactccatctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6812964 230 - 7209941 ggtggatcacc--------tgaggtcaagagttcgagaccagcctggccaagatggtgaaacccccatctccactaagagtac--aaaaaaaatttagctgggcgtgatggcaggtgcctgtaatcccagctacttgggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggtgccaatgtactccagcctgggcgaca-a---gaaactccatctT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553385 229 + 3907144 ggtggatcacc--------tgaggtcaagagttcgagaccagcccggccaagatggtgaaa-ccccatctctactaagagtac--aaaaaaaatttagctgggcatgatggcaggtgcctgtaatcccagctacttgggagtctgagg----------------caggagaatcacttgaacctgggaggcaaaggttgcagtgagccaagatggcgccaatgcactccagcctgggcgacg-a---gaaactccatctT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21551773 226 - 44557958 ggtgaatcaca----------aggtcaggagatcgagaccatcatgggtaacacagtgaaa--cctgtcttgactaaaaatac--aaaaaa---ttagccgggcgtggtggcacatccctatagttccagctattagggaggcggagg----------------cagaagaatcacttgaacctgagaggcagaggttgcagtgaactgagatcgcaccactgcactccagcctgcgtgaca-gagtgagactctatctc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6365935 226 + 6628207 ggtggatcaca----------aggtcaggagatcgagaccatcatgggtaacacagtgaaa--cctgtcttgactaaaaatac--aaaaaa---ttagctgggtgtagtggcacatccctatagttccagctactagggaagctgagg----------------cagaagaatcacttgaacctgagaggcagaggttgcagtgaactgagatcacaccactgcactccagcctgcatgaca-gagtgagactctatctc i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13731374 236 + 13852661 ggaagatcact--------tgagttcaggagtttgagaccagcctgagcaa----gtgaga-ccttgtctctactaaaaa-----acagaacaattagttgtg---agctgagggcatctgtagttccagcttctcaggaggctgaggctcccttgaggagggtcaggaggatgacttgaacccaaaagtttgaggctgctgtgagttaggctgatgccatggcactccagcctggttaacaga---gtaagactgtctc i otoGar3.GL873566 I 19 I 102 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I a score=58255.000000 s hg38.chr16_GL383557v1_alt 70724 10 + 89672 ttgaaattct s panTro5.chr16 21502208 10 - 81586097 ttgaaattct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563753 10 - 90481686 TTGAAATTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796641 10 + 3010529 ttgaaattct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915047 10 + 163208435 ttgaaattct i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382555 10 - 74971481 TTGAAACTCT i rheMac8.chr20 C 0 I 14 s macFas5.chr20 21095194 10 - 78541002 TTGAAACTCT i macFas5.chr20 C 0 I 11 s macNem1.NW_012011355v1 14488828 10 + 26466322 TTGAAACTCT i macNem1.NW_012011355v1 C 0 I 14 s cerAty1.NW_011999143v1 20815430 10 + 43916225 TTGAAACTCT i cerAty1.NW_011999143v1 C 0 I 14 s chlSab2.chr5 58245969 10 + 75399963 ttgaaactct i chlSab2.chr5 C 0 I 11 s manLeu1.NW_012101698v1 6813194 10 - 7209941 TTGAAACTCT i manLeu1.NW_012101698v1 C 0 I 21 s colAng1.NW_012123265v1 553614 10 + 3907144 TAGAAACTCT i colAng1.NW_012123265v1 C 0 I 9 s calJac3.chr20 21551999 10 - 44557958 aaacaacccc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366161 10 + 6628207 aaaCAACCCC i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13731712 10 + 13852661 CTAAAAATCT i otoGar3.GL873566 I 102 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I a score=34089.000000 s hg38.chr16_GL383557v1_alt 70734 18 + 89672 atctcaaaaataaataaa s panTro5.chr16 21502218 18 - 81586097 gtctcaaaaataaataaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563763 18 - 90481686 GTCTCAAaaataaataaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796651 18 + 3010529 gtctcaaaaataaataaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915057 18 + 163208435 gtctcaaaaataaataaa i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21095215 10 - 78541002 GTCTCAGAAA-------- i macFas5.chr20 I 11 C 0 s chlSab2.chr5 58245990 18 + 75399963 gtctcaaaaataaaaaaa i chlSab2.chr5 I 11 C 0 s colAng1.NW_012123265v1 553633 15 + 3907144 GTCTCAAAAATAAAT--- i colAng1.NW_012123265v1 I 9 C 0 s calJac3.chr20 21552009 16 - 44557958 cccccaaaaaaaa--caa i calJac3.chr20 C 0 I 4 s saiBol1.JH378225 6366171 18 + 6628207 CTATCAAAAAAAAACCAA i saiBol1.JH378225 C 0 I 4 s otoGar3.GL873566 13731722 18 + 13852661 ATACCTAAAACTAATTAT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e macNem1.NW_012011355v1 14488838 14 + 26466322 I e rheMac8.chr20 21382565 14 - 74971481 I e manLeu1.NW_012101698v1 6813204 21 - 7209941 I e cerAty1.NW_011999143v1 20815440 14 + 43916225 I a score=-21696.000000 s hg38.chr16_GL383557v1_alt 70752 9 + 89672 -ttaataata-------- s panTro5.chr16 21502236 8 - 81586097 -ttaataat--------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563781 8 - 90481686 -ttaataat--------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796669 9 + 3010529 -ttaataata-------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915075 8 + 163208435 -ttaataaa--------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382579 8 - 74971481 -TCAGAAAA--------- i rheMac8.chr20 I 14 C 0 s macFas5.chr20 21095225 1 - 78541002 --------A--------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488852 8 + 26466322 -TCAGAAAA--------- i macNem1.NW_012011355v1 I 14 C 0 s cerAty1.NW_011999143v1 20815454 8 + 43916225 -TCAGGAAA--------- i cerAty1.NW_011999143v1 I 14 C 0 s chlSab2.chr5 58246008 8 + 75399963 -aaataaaa--------- i chlSab2.chr5 C 0 I 1 s calJac3.chr20 21552029 6 - 44557958 -ACAACA----------- i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6366193 6 + 6628207 -ACAACA----------- i saiBol1.JH378225 I 4 C 0 s otoGar3.GL873566 13731740 17 + 13852661 TTCAAAGAC-TTTTCTTA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I e colAng1.NW_012123265v1 553648 0 + 3907144 C e manLeu1.NW_012101698v1 6813204 21 - 7209941 I a score=18609.000000 s hg38.chr16_GL383557v1_alt 70761 6 + 89672 -aaaaaa s panTro5.chr16 21502244 6 - 81586097 -aaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563789 6 - 90481686 -taaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796678 6 + 3010529 -aaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915083 6 + 163208435 -aaaaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382587 6 - 74971481 -AAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095226 6 - 78541002 -AAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488860 6 + 26466322 -AAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815462 6 + 43916225 -AAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246017 6 + 75399963 -aaaaaa i chlSab2.chr5 I 1 C 0 s manLeu1.NW_012101698v1 6813225 6 - 7209941 -AAAAAA i manLeu1.NW_012101698v1 I 21 C 0 s colAng1.NW_012123265v1 553648 6 + 3907144 -TAAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552035 5 - 44557958 --ACAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366199 5 + 6628207 --ACAAC i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13731757 6 + 13852661 CCAAAA- i otoGar3.GL873566 C 0 I 5 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e proCoq1.NW_012152729v1 2957955 147 + 9850184 I e dasNov3.JH569970 942419 4 + 1009443 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I a score=72045.000000 s hg38.chr16_GL383557v1_alt 70767 10 + 89672 aaa-------GTTACGG s panTro5.chr16 21502250 10 - 81586097 aaa-------GTTACGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563795 10 - 90481686 aaA-------GTTACGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796684 10 + 3010529 aaa-------GTTACGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915089 10 + 163208435 aaa-------GTTATGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382593 10 - 74971481 AAA-------GTTACGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095232 10 - 78541002 AAA-------GTTACGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488866 10 + 26466322 AAA-------GTTACGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815468 10 + 43916225 AAA-------GTTACGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246023 10 + 75399963 taa-------GTTACGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813231 10 - 7209941 AAA-------GTTATGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553654 10 + 3907144 AAA-------GTTACGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552040 6 - 44557958 AAA-------ATT---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366204 6 + 6628207 AAA-------GTT---- i saiBol1.JH378225 C 0 C 0 s proCoq1.NW_012152729v1 2958102 10 + 9850184 AAA-------GTTATGG i proCoq1.NW_012152729v1 I 147 C 0 s otoGar3.GL873566 13731768 17 + 13852661 AAAttttatttttataa i otoGar3.GL873566 I 5 C 0 s dasNov3.JH569970 942423 10 + 1009443 AAA-------GTTATGG i dasNov3.JH569970 I 4 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I e aotNan1.NW_018500622v1 9301467 475 - 10531588 I e cebCap1.NW_016107433v1 3348466 484 - 5917169 I a score=257010.000000 s hg38.chr16_GL383557v1_alt 70777 22 + 89672 ACAAAC------AGCA------------------------AGTTCAATAGAC s panTro5.chr16 21502260 22 - 81586097 ACAAAC------AGCA------------------------AGTTCAATAGCT i panTro5.chr16 C 0 I 13 s panPan2.chr16 21563805 22 - 90481686 ACAAAC------AGCA------------------------AGTTCAATAGCT i panPan2.chr16 C 0 I 13 s gorGor5.CYUI01000018v1 796694 22 + 3010529 ACAAAC------AGCA------------------------AGTTCAATAGAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915099 22 + 163208435 ACAAAC------AGCA------------------------AGTTCAATAGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382603 22 - 74971481 ACAAAC------AGCA------------------------AGTTAAATAGAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095242 22 - 78541002 ACAAAC------AGCA------------------------AGTTAAATAGAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488876 22 + 26466322 ACAAAC------AGCA------------------------AGTTAAATAGAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815478 22 + 43916225 ACAAAC------AGCA------------------------AGTTAAATAGAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246033 22 + 75399963 ACAAAC------AGCA------------------------AGTTAAATAGAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813241 22 - 7209941 ACAAAC------AGCA------------------------AGTTAAATAGAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553664 22 + 3907144 ACAAAC------AGCA------------------------AGTTAAATAGAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552046 22 - 44557958 ACAAAC------ATCA------------------------AGTTCAATAGAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366210 22 + 6628207 ACAAAC------AGCA------------------------AGTTCAATAGAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348950 22 - 5917169 ACAAAC------ATCA------------------------AGTTCAATAGAC i cebCap1.NW_016107433v1 I 484 C 0 s aotNan1.NW_018500622v1 9301942 22 - 10531588 ACAAAC------ATCA------------------------AGTTCAATAGAC i aotNan1.NW_018500622v1 I 475 C 0 s proCoq1.NW_012152729v1 2958112 22 + 9850184 ACAGAC------AGCA------------------------AGTTCAACAGAC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13731785 52 + 13852661 actgactaaaatagtacatatgcatggggtacttggtgatatttcaatacat i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 942433 22 + 1009443 ACAAAC------AGCA------------------------AGTTCAATAGTC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I e mm10.chr8 22485220 549 - 129401213 I a score=82456.000000 s hg38.chr16_GL383557v1_alt 70799 7 + 89672 TTGAAGC s panTro5.chr16 21502295 7 - 81586097 TTGAAGC i panTro5.chr16 I 13 C 0 s panPan2.chr16 21563840 7 - 90481686 TTGAAGC i panPan2.chr16 I 13 C 0 s gorGor5.CYUI01000018v1 796716 7 + 3010529 TTGAAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915121 5 + 163208435 --GAAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382625 7 - 74971481 TTGAAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095264 7 - 78541002 TTGAAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488898 7 + 26466322 TTGAGGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815500 7 + 43916225 TTGAAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246055 7 + 75399963 TTGAAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813263 7 - 7209941 TTGAAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553686 7 + 3907144 TTGAAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552068 7 - 44557958 TTAATGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366232 7 + 6628207 TTAACGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348972 7 - 5917169 TTAACGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301964 7 - 10531588 TTAACGC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2958134 7 + 9850184 TTGAAAC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13731837 7 + 13852661 ctaatgt i otoGar3.GL873566 C 0 I 27 s mm10.chr8 22485769 7 - 129401213 TTGAAGC i mm10.chr8 I 549 C 0 s dasNov3.JH569970 942455 7 + 1009443 TTGAATC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951032 389 + 72247402 I a score=1624953.000000 s hg38.chr16_GL383557v1_alt 70806 119 + 89672 ATATCT--------------------------------------------------TTAA---TTTATTGGATGCCTGCTGTGTATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG s panTro5.chr16 21502302 119 - 81586097 ATATCT--------------------------------------------------TTAA---TTTATTGGATGCCTGCTGTATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563847 119 - 90481686 ATATCT--------------------------------------------------TTAA---TTTATTGGATGCCTGCTGTATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796723 119 + 3010529 ATATCT--------------------------------------------------TTAA---TTTATTGGATGCCTGCTGTATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ATGACAACT-AGTGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915126 119 + 163208435 ATATCT--------------------------------------------------TTAA---TTTACTGGGTGCCTGCTATATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382632 119 - 74971481 ATATCT--------------------------------------------------TTAa---tttattgagtgcctgctgtatatttagcactAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACAACAACT-AGTGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095271 119 - 78541002 ATATCT--------------------------------------------------TTAA---TTTATTGAGTGCCTGCTGTATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACAACAACT-AGTGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14488905 119 + 26466322 ATATCT--------------------------------------------------TTAa---tttattgagtgcctgctgtatatttagcactAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACAACAACT-AGTGTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815507 119 + 43916225 ATATCT--------------------------------------------------TTAa---tttattgagtgcctgctgtatatttagcactAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246062 119 + 75399963 ATATCT--------------------------------------------------TTAA---TTTATTGAGTGCCTGCTGTATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCACCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813270 119 - 7209941 ATATCT--------------------------------------------------TTAa---tttattgagtgcctgctgtatatttagcactAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ACGACAACT-AGTGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553693 119 + 3907144 ATGTCT--------------------------------------------------TTAA---TTTATTGAGTGCCTGCTGTATATTTAGCACTAAGGGAGGATGGGCACGTCTGAGCCATC--TTTGTCATCTAGAGACTTTATACCAATCTGGCAAC-ACGACAACT-AGTGTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552075 117 - 44557958 CTATC----------------------------------------------------TAA---TTTATTGGGTGCCTGCTGTATATTTCGCATTAAGGGAGGATGGGCATGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ATGACGACT-AGTGTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366239 117 + 6628207 CTATC----------------------------------------------------TAA---TTTATTGGGTGCCTGCTGTATATTTTGCATTAAGGGAGGATGGGCATGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ATGACGACT-AGTGTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3348979 117 - 5917169 CTATC----------------------------------------------------TAA---TTTATTGGGTGCCTGCTGTATATTTTGCATTAAGGGAGGATGGGCATGTCTGAGCCATC--TTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ATGACGACT-AGTGTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9301971 116 - 10531588 CTATC----------------------------------------------------TAA---TTTATTGGGTGCCTGCTGTATATTCTGCATTAAGGGAGGAGG---ATGTCTGAGCCATCTTTTTGTCATCTAGAGACTTTAAACCAATCTGGCAAC-ATGACAACTGAGTGT- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951421 119 + 72247402 atatct--------------------------------------------------ttga---tttactaggtacctggtgtatacttagcactaagggaagatgggcaagtatgaaccatc--tttgtcatctagggactttaaatcagtctggcaac-aagaagact-agtgta i micMur3.chr20 I 389 C 0 s proCoq1.NW_012152729v1 2958141 117 + 9850184 --ATGT--------------------------------------------------TTGA---TTTACTAGGTGCCTGCTGTATGCTTAGCACTAAAGGAATATGGGCACATATGAACCATC--TCTGTCATCTAGGGACTTTAAATCAGTCTGGCAAC-ATGAAGACT-AGTGTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13731871 157 + 13852661 atatctgtcCTAAATGGTTTTTAATCAAACCAGCAAGTTGAACAGACTGAACAGACTTGAAGCTTTACTAGGTGCCTGCTATATACTCAGCACTAATGGAAAATGGGCACATAGGAACCATT--TTTATCATCTAGGGACTTTAAATCAGC----------------CT-AGTGTG i otoGar3.GL873566 I 27 C 0 s mm10.chr8 22485776 88 - 129401213 -------------------------------------------------------ACATA---TTTATTGAATGGCCTCTGTATGTTTAACACTA-----------------CCGAG-CACC--TTTGTCA---ATAGGTTTTGATTCAAT-TAGCAAC-GTGAAGACA-----TG i mm10.chr8 C 0 C 0 s dasNov3.JH569970 942462 120 + 1009443 ATATAT--------------------------------------------------TTAA---CGCATTGGATGACTGATATATATTTAGTACTAGGGGAGGAGGGACACATATGAGCCATC--TTTGTCTTCAAGGGCCTTTGAACCAATTTGGCAACAATTAAGACT-CATGTG i dasNov3.JH569970 C 0 I 489 e canFam3.chr5 80481935 520 + 88915250 I a score=1003843.000000 s hg38.chr16_GL383557v1_alt 70925 62 + 89672 GGATAAAAATTGGACAG-TGATGCTCTATACCAAAATGCGTGCTGCATGTAACGCCCCCAAAC s panTro5.chr16 21502421 62 - 81586097 GGATAAAAATTGGACAG-TGATGCTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21563966 62 - 90481686 GGATAAAAATTGGACAG-TGATGCTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796842 61 + 3010529 GGATAAAAATTGGACAG-TGATGCTCTATGCCAAAATGCGTGCTGCATGTAACG-CCCCAAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915245 62 + 163208435 GGATAAAAATTGGACAG-TGATGCTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382751 62 - 74971481 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095390 62 - 78541002 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489024 62 + 26466322 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815626 62 + 43916225 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246181 62 + 75399963 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813389 62 - 7209941 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553812 62 + 3907144 GGATAAAAATTGGACAG-TGATGTTCTATGCCAAAATGCGTGCTGCATGTAACACCCCCAAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552192 62 - 44557958 GGATAAAAATTGGACAG-TGATGCTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366356 62 + 6628207 GGATAAAAATTGGACAG-TGATGCTCTATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349096 62 - 5917169 GGATAAAAATTGGACAG-TGATGCTCAATGCCAAAATGCGTGCTGCATGTAACGCCCCCAAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302087 63 - 10531588 GGATAAAAATTGGACAGTTTATGCTCTATGCCAAAATGCGTGCTGCATGTAACACCCCCAAAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951540 62 + 72247402 ggataaaacTTGGACAC-TGACGCTATATGCCAAAATACATGCTGTATATAACGCCCCCGAAC i micMur3.chr20 C 0 I 9 s proCoq1.NW_012152729v1 2958258 62 + 9850184 GGATAAAACTTGGACAC-TGACGCTATATGCCAAAATACACGCTGCATATAACGCCCCCAAAC i proCoq1.NW_012152729v1 C 0 I 15 s otoGar3.GL873566 13732028 62 + 13852661 GGATAGAAATTGGACGG-TGATGCTATATGCCAAAATAAGTGCTGCATATGACGCCCCCAAAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22485864 62 - 129401213 AGGTAAAAATCAGACAT-CAGTTTTATATGCTAAGATATATGCTGCATCTAAGTATCCCTAAT i mm10.chr8 C 0 I 3 s dasNov3.JH569970 943071 62 + 1009443 GGGCAAAAAAATCACAA-TGACGCTATATGCCAAAATATGTGTTGCACGCAATGCTCTCAAAC i dasNov3.JH569970 I 489 C 0 e canFam3.chr5 80481935 520 + 88915250 I a score=67215.000000 s hg38.chr16_GL383557v1_alt 70987 9 + 89672 ---GATAACATG s panTro5.chr16 21502483 9 - 81586097 ---GATAACATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564028 9 - 90481686 ---GATAACATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796903 9 + 3010529 ---GATAACATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915307 9 + 163208435 ---GATAACATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382813 9 - 74971481 ---GATAACACG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095452 9 - 78541002 ---GATAACACG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489086 9 + 26466322 ---GATAACACG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815688 9 + 43916225 ---GATAACACG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246243 9 + 75399963 ---GATAACACG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813451 9 - 7209941 ---GATAACACG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553874 9 + 3907144 ---GATAACACG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552254 9 - 44557958 ---GACAAAATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366418 9 + 6628207 ---GATAAAATG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349158 9 - 5917169 ---GATAAAATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302150 9 - 10531588 ---GATAAAATG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732090 8 + 13852661 ---AATGAAAG- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22485929 7 - 129401213 ---GAGAAAA-- i mm10.chr8 I 3 C 0 s dasNov3.JH569970 943133 9 + 1009443 AATGAGAAA--- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80481935 520 + 88915250 I e micMur3.chr20 54951602 9 + 72247402 I e proCoq1.NW_012152729v1 2958320 15 + 9850184 I a score=278306.000000 s hg38.chr16_GL383557v1_alt 70996 22 + 89672 GCTTTATAACAAG-CATAACCCA s panTro5.chr16 21502492 22 - 81586097 GCTTTATAACATG-CATAACCCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564037 22 - 90481686 GCTTTATAACATG-CATAACCCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796912 22 + 3010529 GCTTTATAACAAG-CATAACCCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915316 22 + 163208435 GCTTTATAACAAG-CGTAACCCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382822 22 - 74971481 GCTTTATAACAAG-CATAACCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095461 22 - 78541002 GCTTTATAACAAG-CATAACCTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489095 22 + 26466322 GCTTTATAACAAG-CATAACCTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815697 22 + 43916225 GCTTTATAACAAG-CATAACCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246252 22 + 75399963 GCTTTATAACAAG-CATAACCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813460 22 - 7209941 GCTTTATAACAAG-CATAACCTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553883 22 + 3907144 GCTTTATAACAAG-CATAACCTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552263 22 - 44557958 GCTTTATAACAAG-CATAACGCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366427 22 + 6628207 GCTTTATAACAAG-CATAACCCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349167 22 - 5917169 GCTTTATAACAAG-CATAACCCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302159 22 - 10531588 GCTTTATAACAAG-CATAACCCA i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22485936 23 - 129401213 GCTTTATAACAAGTCACAGACCA i mm10.chr8 C 0 C 0 s canFam3.chr5 80482455 23 + 88915250 GCTTTATAATAAGAAATAAAACA i canFam3.chr5 I 520 C 0 s dasNov3.JH569970 943142 22 + 1009443 GCTTAATAGTAGA-CATAAACCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54951602 9 + 72247402 I e proCoq1.NW_012152729v1 2958320 15 + 9850184 I e otoGar3.GL873566 13732098 0 + 13852661 C a score=94426.000000 s hg38.chr16_GL383557v1_alt 71018 6 + 89672 GCTGCC s panTro5.chr16 21502514 6 - 81586097 GCTGCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564059 6 - 90481686 GCTGCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796934 6 + 3010529 GCTGCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915338 6 + 163208435 GCTGCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382844 6 - 74971481 GCTGCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095483 6 - 78541002 GCTGCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489117 6 + 26466322 GCTGCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815719 6 + 43916225 GCTGCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246274 6 + 75399963 GCTGCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813482 6 - 7209941 GCTGCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553905 6 + 3907144 GCTGCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552285 6 - 44557958 GCTGCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366449 6 + 6628207 GCTGCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349189 6 - 5917169 GCTGCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302181 6 - 10531588 GCTGCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951611 6 + 72247402 GCTGCT i micMur3.chr20 I 9 C 0 s otoGar3.GL873566 13732098 6 + 13852661 GCTGCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22485959 6 - 129401213 AGTGCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80482478 6 + 88915250 GGTGCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943164 6 + 1009443 GATGAT i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2958320 15 + 9850184 I a score=1108350.000000 s hg38.chr16_GL383557v1_alt 71024 82 + 89672 AAAGGATGGGTGGGGATGAGGAAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGACGAGGAGTAGAATATGCAGGTTTGAGAG s panTro5.chr16 21502520 82 - 81586097 AAAGGATGGGTGGGGATGAGGAAAAAAGGA-Tggggaacagtgcaagctaagtgacgaggagtagaatatgcaggtttgagag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564065 82 - 90481686 AAAGGATGGGTGGGGATGAGGAAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGACGAGGAGTAGAATATGCAGGTTTGAGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 796940 81 + 3010529 AAAGGATGGGTGGGGATG-GGAAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGACGAGGAGTAGAATATGCAGGTTTGAGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915344 82 + 163208435 AAAGGATGGGTGGGGATGAGGAAAAACGGA-TGGGGAACAGTGCAAGCTAAGTGACGAGGACTAGAATATGCAGGTTTGAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382850 76 - 74971481 AAAGGATGGGTGGTGATGAGGTAAAAAGGA-Tggggaacagtgcaagctaagtgac------tagaatatgcaggtttgaggg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095489 76 - 78541002 AAAGGATGGGTGGTGATGAGGTAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGAC------TAGAATATGCAGGTTTGAGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489123 76 + 26466322 AAAGGATGGGTGGTGATGAGGTAAAAAGGA-Tggggaacagtgcaagctaagtgac------tagaatatgcaggtttgaggg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815725 76 + 43916225 AAAGGATGGGTGGTGATGAGGTAAAAAGGA-Tggggaacagtgcaagctaagtgac------tagaatatgcaggtttgaggg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246280 76 + 75399963 AAAGGATGGGTGGTGATGAGGTAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGAC------TAGAATATGCAGGTTTGAGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813488 76 - 7209941 AAAGGATGGGTGGTGATGAGGTAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGAC------TAGAATATGCAGGTTTGAGGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553911 76 + 3907144 AAAGGATGGGTGGCAATGAGGTAAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGAC------TAGAATATGCAGGTTTGAGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552291 82 - 44557958 AAAGGATGGGTGGGGATGGGGAGAAAAGGA-TGGGGAATGGTGCAAGCTAAGTGATGAGGACTAGAATATGCAGGTTTGAGGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366455 82 + 6628207 AAAGGATGGGTGGGGATGGGGAGAAAAGGA-TGGGGAACGGTGCAAGCTAAGTGATGAGGACTAGAATATGCAGGTTTGAGGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349195 82 - 5917169 AAAGGATGGGTGGGGATGGGGAGAAAAGGA-Tggggaacggtgcaagctaagtgatgaggactagaatatgcaggtttgaggg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302187 82 - 10531588 AAAGGATGGGTGGGGACGGAGAGAAAAGGA-TGGGGAACAGTGCAAGCTAAGTGATGAGGACTAGAATATGCAGGTTTGAGGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951617 82 + 72247402 CAAGGATGAGCGGGGATGGGTAGAAAAGGG-TGGAGAACAGTGTGAGCTAAGTGAAAAGGACTGGAATATGCAAGTTTAGAGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2958335 82 + 9850184 AAAGGATGGGTGGGGATGGGTAGAGAAGGG-TGGAGAACAGTGTGAGCTAAGTGAAAAGGACTGGAATATACAAGTTTAGAGG i proCoq1.NW_012152729v1 I 15 C 0 s otoGar3.GL873566 13732104 82 + 13852661 AAAGGATGGGTGGAGATAGGTAGAAAAGGA-TGGAGGACAATGTGAGCTAAGTGGAAAGGAATGGAATATGCAGATTTGAAGG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22485965 71 - 129401213 -GAGGGTG-GTAAAGATGGTAAGTTAGGCActggatggtggtggca-ctgactgtt---------actacgcacatttgagag i mm10.chr8 C 0 I 110 s canFam3.chr5 80482484 78 + 88915250 GAAGGATGGGTGAG--TGGGCAGCAAAGGA-TAGAGAACAAAGTGAACTAAGTGAAAAGGACTGGAATA-GCGGCTTGGTGG- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943170 75 + 1009443 ACAGGATGGGTG-------GGACACAGTGG-TGTAGCACAGTACTATCTAAGCAACAAGGAATGAAATACACAGGTTTTAGGG i dasNov3.JH569970 C 0 C 0 a score=1002342.000000 s hg38.chr16_GL383557v1_alt 71106 64 + 89672 CTGTGAAGAAACCATT----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA s panTro5.chr16 21502602 64 - 81586097 ctgtgaagaaaccatc----ttgactacaaggggaagtgagatgagagaagtggaaaaaataaagtca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564147 64 - 90481686 CTGTGAAGAAACCATC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797021 64 + 3010529 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGACGAGAGAAGTGGAAAAAATAAAGTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915426 64 + 163208435 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382926 64 - 74971481 ctgtgaagaaaccagc----ttgactacaaggggaagtgagatgagagaagtggaaaaaataaagtca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095565 64 - 78541002 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489199 64 + 26466322 ctgtgaagaaaccagc----ttgactacaaggggaagtgagatgagagaagtggaaaaaataaagtca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815801 64 + 43916225 ctgtgaagaaaccagc----ttgactacaaggggaagtgagatgagagaagtggaaaaaataaagtca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246356 64 + 75399963 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813564 64 - 7209941 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 553987 64 + 3907144 CTGTGAAGAAACCAGC----TTGACTACAAGAGGAAGTGAGATGAGAGAAGTGGAAAAAATAAAGTCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552373 64 - 44557958 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGCGAAAAAAATAAAGTCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366537 62 + 6628207 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGTGAAAAAAAT--AGTCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349277 60 - 5917169 ctgtgaagaaaccagc----ttgactacaaggggaagTGAGATGACAGAAGCG--AAAAAT--AGTCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302269 64 - 10531588 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTGAGATGAGAGAAGCGAAAAAAATAAAGTCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951699 62 + 72247402 C--TAAAGAAACCAGC----TGGACTTCAAGGGCAAGTGAGATCAGAAAGGAGGAAGAAATAAAGTCA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2958417 64 + 9850184 CTGTGAAGAAACCTGC----TTGACTTCAAGGGCAAATGAGATGAGAAAGGAAGAAGAAATAAAGTCA i proCoq1.NW_012152729v1 C 0 I 94 s otoGar3.GL873566 13732186 68 + 13852661 CTCTGAAGAGACCAGCTTGATTGACTTCAAGGGGAAGCAAGATAAGAAAAGAGGAAGAAATAATGTCA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80482562 64 + 88915250 CTCTGAAGAAACCAGC----TTGACCGTAAGAGGATAAGAGATAAAACAGAAGGAACAAATAATGTGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943245 63 + 1009443 CTGTGAAGAAACCAGC----TTGACTACAAGGGGAAGTAAGATCAGAAAAA-GAAAAAAAAACAGTTA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22486036 110 - 129401213 I a score=222066.000000 s hg38.chr16_GL383557v1_alt 71170 16 + 89672 TATACATAATGTAGAG s panTro5.chr16 21502666 16 - 81586097 tatacataatgtagag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564211 16 - 90481686 TATACATAATGTAGAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797085 16 + 3010529 TATACATAATGCAGAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915490 16 + 163208435 TATACATAATGCAGAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21382990 16 - 74971481 tatatataatgcagag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095629 16 - 78541002 TATATATAATGCAGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489263 16 + 26466322 tatatataatgcagag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815865 16 + 43916225 tatatataatgcagag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246420 16 + 75399963 TATATATAATGCAGAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813628 16 - 7209941 TATATATAATGCAGAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554051 16 + 3907144 TATATATAATGCAAAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552437 16 - 44557958 TATACATAATGCAGAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366599 16 + 6628207 TATACATAATGCAGAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349337 16 - 5917169 TATACATAATGCAGAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302333 16 - 10531588 TATACATAATACAGAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951761 16 + 72247402 AATCCATAATGCAGAG i micMur3.chr20 C 0 I 77 s otoGar3.GL873566 13732254 16 + 13852661 AATCCATAACGCAGAG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80482626 16 + 88915250 TATCTATAACACAGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943308 16 + 1009443 AATGTATAATGCTCAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22486036 110 - 129401213 I e proCoq1.NW_012152729v1 2958481 94 + 9850184 I a score=304494.000000 s hg38.chr16_GL383557v1_alt 71186 33 + 89672 TCGAATCTCAAGGAGAGCTAGATATAAGATAAA s panTro5.chr16 21502682 33 - 81586097 tccaatcTCAAGGAGAGCTAGATACAAGATAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564227 33 - 90481686 TCCAATCTCAAGGAGAGCTAGATACAAGATAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797101 33 + 3010529 TCGAATCTCAAGGAGAGCTAGATATAAGATAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915506 33 + 163208435 CCGAATCTCAAGGAGTGCTAGATATAAGATAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383006 28 - 74971481 ctgaagctcaaggagTGCTAGAT-----ATAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095645 28 - 78541002 CTGAAGCTCAAGGAGTGCTAGAT-----ATAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489279 28 + 26466322 ctgaagctcaaggagTGCTAGAT-----ATAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815881 28 + 43916225 ctgaagctcaaggagTGCTAGAT-----ATAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246436 28 + 75399963 CTGAATCTCAAGGAGTGCTAGAT-----ATAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813644 28 - 7209941 CTGAAGCTCAAGGAGTGCTAGAT-----ATAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554067 28 + 3907144 CCGAATCTCAAGGAGTGCTAGCT-----ATAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552453 33 - 44557958 CTGAATCTTAAGGAGTACTAGATGCAAGATAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366615 33 + 6628207 CTGAATCTCAAGGAGTGCTAGATGCAAGATAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349353 33 - 5917169 CTGAATCTCAGGGAGTGCTAGATGCAAGATAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302349 33 - 10531588 CTGAATCTTAAGGAGTGCTAGATGCAAGATAAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732270 33 + 13852661 CTGAATTTTAACAAGTACTAAACATAGGACAAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80482642 33 + 88915250 CCTAATTTTAAGGGGTGCTAAATGCAAAACAGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943324 32 + 1009443 -CTGATATTAAGGGGTGGTAAATGCAAGATAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54951777 77 + 72247402 I e mm10.chr8 22486036 110 - 129401213 I e proCoq1.NW_012152729v1 2958481 94 + 9850184 I a score=386721.000000 s hg38.chr16_GL383557v1_alt 71219 35 + 89672 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGATA---- s panTro5.chr16 21502715 35 - 81586097 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGATA---- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564260 35 - 90481686 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGATA---- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797134 35 + 3010529 CAGCCTAAGTTTTGTAATAA-----AAACATATATAGATA---- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915539 35 + 163208435 CAGCCTAAGTTTCGTAATAA-----AAACATATATAGATA---- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383034 30 - 74971481 TAGCCTAAGTTTTGTAATAA-----AAACATATA-----A---- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095673 35 - 78541002 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGTTA---- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489307 35 + 26466322 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGTTA---- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815909 35 + 43916225 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGTTA---- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246464 35 + 75399963 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGTTA---- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813672 35 - 7209941 TAGCCTAAGTTTTGTAAGAA-----AAACATATATAGTTA---- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554095 35 + 3907144 TAGCCTAAGTTTTGTAATAA-----AAACATATATAGTTA---- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552486 35 - 44557958 TAGTCTAAGTTTTGTAATAA-----AAACATATATAGATA---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366648 35 + 6628207 TAGTCTAAGTTTTGTAATAA-----AAACATATATAGATA---- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349386 35 - 5917169 TAGTCTACGTTTTGTAATAA-----AAACATATATAGATA---- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302382 35 - 10531588 TAGTCTAAGTTTTGCAATAA-----AAACATATATAGATA---- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732303 27 + 13852661 CAGTCTA--------AACAA-----AAACATTTATAGGTA---- i otoGar3.GL873566 C 0 I 137 s mm10.chr8 22486146 25 - 129401213 TAGTCTAAGATTTATAATTA-----AAAGA-------------- i mm10.chr8 I 110 C 0 s canFam3.chr5 80482675 31 + 88915250 --GTCTACATTTTTTAATAA-----CAACATGTACTCA------ i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943356 44 + 1009443 GAATCTAAGTTTTGAAATGCCTGGTAAAAACATACAGGTGCTCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54951777 77 + 72247402 I e proCoq1.NW_012152729v1 2958481 94 + 9850184 I a score=49014.000000 s hg38.chr16_GL383557v1_alt 71254 6 + 89672 ATAAAT s panTro5.chr16 21502750 6 - 81586097 ATAAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564295 6 - 90481686 ATAAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797169 6 + 3010529 ATAAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915574 6 + 163208435 ATAAAT i nomLeu3.chr2 C 0 I 4 s rheMac8.chr20 21383064 6 - 74971481 ATAGTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095708 6 - 78541002 ATAGTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489342 6 + 26466322 ATAGTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815944 6 + 43916225 ATAGTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246499 6 + 75399963 ATAGTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813707 6 - 7209941 ATAGTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554130 6 + 3907144 ATAGTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552521 6 - 44557958 ATAAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366683 6 + 6628207 ATAAAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349421 6 - 5917169 ATAAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302417 6 - 10531588 ATAAAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732467 6 + 13852661 ataaat i otoGar3.GL873566 I 137 I 4 s mm10.chr8 22486171 6 - 129401213 ATTGTT i mm10.chr8 C 0 C 0 s canFam3.chr5 80482706 6 + 88915250 ATACAC i canFam3.chr5 C 0 I 5 s dasNov3.JH569970 943400 6 + 1009443 AGAAAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54951777 77 + 72247402 I e proCoq1.NW_012152729v1 2958481 94 + 9850184 I a score=540125.000000 s hg38.chr16_GL383557v1_alt 71260 32 + 89672 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT s panTro5.chr16 21502756 32 - 81586097 ------AGTTTTATTTATCTGACCCCTAACTTGTGGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564301 32 - 90481686 ------AGTTTTATTTATCTGACCCCTAACTTGTGGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797175 32 + 3010529 ------AGTTTGATTTATCTGACCCCTAACTTTTGGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915584 32 + 163208435 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i nomLeu3.chr2 I 4 C 0 s rheMac8.chr20 21383070 32 - 74971481 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095714 32 - 78541002 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489348 32 + 26466322 ------AGTGTGATTTATCTGACCCCTAACTTGTAGGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815950 32 + 43916225 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246505 32 + 75399963 ------AGTTTGATTTATCTAACCCCTAACTTGTGGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813713 32 - 7209941 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554136 32 + 3907144 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552527 32 - 44557958 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366689 32 + 6628207 ------AGTATGATTTATCTGACCCCTAACTTGTGGGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349427 32 - 5917169 ------AGTTTGATTTATCTGACCCCTAACTTGTGGGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302423 32 - 10531588 ------AGTTTTATTTATCTGACCCCTAACTTGTGGGT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951854 32 + 72247402 ------AGTTTAATTTATCTGACCCCTAACTTGTGGGT i micMur3.chr20 I 77 C 0 s proCoq1.NW_012152729v1 2958575 32 + 9850184 ------AGTTTAATTTATCTGACCCCTAACTTGTGGGT i proCoq1.NW_012152729v1 I 94 I 355 s otoGar3.GL873566 13732477 32 + 13852661 ------agTTTAATTTATCTGACCCCTAACTTGTGGGA i otoGar3.GL873566 I 4 C 0 s mm10.chr8 22486177 32 - 129401213 ------GGCTTAATTCATCTGACTCCTAAACGGTAGGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80482717 32 + 88915250 ------CGCTTATTTTATCTGACTCTTAACCTGTGGGT i canFam3.chr5 I 5 C 0 s dasNov3.JH569970 943406 21 + 1009443 AATGTCAGTTT-ACCAATCTGA---------------- i dasNov3.JH569970 C 0 C 0 a score=113890.000000 s hg38.chr16_GL383557v1_alt 71292 14 + 89672 TTCTTCTCCTGTAG s panTro5.chr16 21502788 14 - 81586097 TTCTTCTCCTGTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564333 14 - 90481686 TTCTTCTCCTGTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797207 14 + 3010529 TTCTTCTCCTGTAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915616 14 + 163208435 TTCTTCTCCTATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383102 14 - 74971481 TTCTTCTCCTGTAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095746 14 - 78541002 TTCTTCTCCTGTAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489380 14 + 26466322 TTCTTCTACTGTAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815982 14 + 43916225 TTCTTCTCCTGTAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246537 14 + 75399963 TTCTTCTCCTGTAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813745 14 - 7209941 TTCTTCTCCTGTAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554168 14 + 3907144 TTCTTCTCCTGCAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552559 11 - 44557958 TTCTT---CTGTAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366721 11 + 6628207 TTCTT---GTGTAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349459 11 - 5917169 TTCTT---CTGTAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302455 11 - 10531588 TTCTT---CTGTAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951886 11 + 72247402 TTCTTTT-TTAT-- i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13732509 11 + 13852661 TTCTTCT-TTAT-- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486209 14 - 129401213 TTCCTCTGAAGCAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80482749 14 + 88915250 TTCTTTTCCTGTAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943427 10 + 1009443 ATCTCCCCCT---- i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2958607 355 + 9850184 I a score=73507.000000 s hg38.chr16_GL383557v1_alt 71306 4 + 89672 GCTT s panTro5.chr16 21502802 4 - 81586097 GCTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564347 4 - 90481686 GCTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797221 4 + 3010529 GTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915630 4 + 163208435 GCTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383116 4 - 74971481 GCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095760 4 - 78541002 GCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489394 4 + 26466322 GCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20815996 4 + 43916225 GCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246551 4 + 75399963 GCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813759 4 - 7209941 GCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554182 4 + 3907144 GCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552570 4 - 44557958 ACTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366732 4 + 6628207 ACTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349470 4 - 5917169 ACTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302466 4 - 10531588 ACTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951897 4 + 72247402 GCTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2958962 4 + 9850184 GCTT i proCoq1.NW_012152729v1 I 355 C 0 s otoGar3.GL873566 13732520 4 + 13852661 GCTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486223 4 - 129401213 GTTT i mm10.chr8 C 0 I 201 s canFam3.chr5 80482763 4 + 88915250 GCTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943437 4 + 1009443 GCTT i dasNov3.JH569970 C 0 C 0 a score=461958.000000 s hg38.chr16_GL383557v1_alt 71310 32 + 89672 CTGGATCAGCTTATGAACAGTG--AGAGTTGAAG s panTro5.chr16 21502806 32 - 81586097 CTGGATCAGCTTATGAACAGTG--AGAGTTGAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564351 32 - 90481686 CTGGATCAGCTTATGAACAGTG--AGAGTTGAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797225 32 + 3010529 CTGGATCAGCTTATGAACAGTG--AGAGTTCAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915634 32 + 163208435 CTGGATCAGCTTATGAACAGTG--AGAGTTGAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383120 32 - 74971481 CTGGATCAGCTTATCAACAGTG--AGAGTTGAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095764 32 - 78541002 CTGGATCAGCTTATCAACAGTG--AGAGTTGAGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489398 32 + 26466322 CTGGATCAGTTTATCAACAGTG--AGAGCTGAGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816000 32 + 43916225 CTGGATCAGCTTATCAACAGTG--AGAGTTGAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246555 32 + 75399963 CTGGATCAGCTTATCAACAGTG--AGAGTTGAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813763 32 - 7209941 CTGGATCAGCTTATCAACAGTG--AGAGTTGAGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554186 32 + 3907144 CTGGATCAGCTTATGAACAGTG--AGAGTTGAGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552574 32 - 44557958 CGGGATCAGCTTATGAACAGTG--AGACTTGAGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366736 32 + 6628207 CGGGATCAGCTTATGAACAGTG--AGACTTGAGG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349474 31 - 5917169 C-GGATCAGCTTATGAACAGTG--AGACTTGAGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302470 32 - 10531588 CAGGATCAGCTTATGAACAGTG--AGACTTGAGG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951901 32 + 72247402 CTGTACCAGCTTATGAACAGTG--ACAGTTGAAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2958966 32 + 9850184 CTGGAGCAGCTCATGAACAGTG--AGAGTTGAAG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13732524 32 + 13852661 TTGGAACACCTTATGAACAGTG--ACAGCTAAAG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80482767 34 + 88915250 CTGGAGCAGCTTATGAACAGTGATAGAGTTTAAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943441 23 + 1009443 ---------TTAGAGAACAGTG--AGCATTTAAG i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22486227 201 - 129401213 I a score=130221.000000 s hg38.chr16_GL383557v1_alt 71342 11 + 89672 --ATAAAAGAGTT s panTro5.chr16 21502838 11 - 81586097 --ATAAAAGAGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564383 11 - 90481686 --ATAAAAGAGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797257 11 + 3010529 --ATAAAAGAGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915666 11 + 163208435 --ATGAAAGAGTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383152 11 - 74971481 --ATAAAAGAGGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095796 11 - 78541002 --ATAAAAGAGGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489430 11 + 26466322 --ATAAAAGAGGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816032 11 + 43916225 --ATAAAAGAGGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246587 11 + 75399963 --ATAAAAGAGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813795 11 - 7209941 --ATAAAAGAGGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554218 11 + 3907144 --ATAAAAGAGGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552606 11 - 44557958 --TTAAAAGAGTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366768 11 + 6628207 --TTAAAAGAGTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349505 11 - 5917169 --TTAAAAGAGTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302502 11 - 10531588 --TTAAAAGAGTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951933 12 + 72247402 TTTTAAA-GAGTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2958998 10 + 9850184 --TTAAA-GAGTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13732556 11 + 13852661 --TTAAAGGAGTT i otoGar3.GL873566 C 0 I 125 s canFam3.chr5 80482801 11 + 88915250 --TTAAAAGAGTT i canFam3.chr5 C 0 C 0 e mm10.chr8 22486227 201 - 129401213 I e dasNov3.JH569970 943464 0 + 1009443 C a score=105300.000000 s hg38.chr16_GL383557v1_alt 71353 7 + 89672 GACTTTC s panTro5.chr16 21502849 7 - 81586097 GACTTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564394 7 - 90481686 GACTTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797268 7 + 3010529 GACTTGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915677 7 + 163208435 GACTTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383163 7 - 74971481 GACTTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095807 7 - 78541002 GACTTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489441 7 + 26466322 GACTTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816043 7 + 43916225 GACTTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246598 7 + 75399963 GACTTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813806 7 - 7209941 GACTTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554229 7 + 3907144 GACTTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552617 7 - 44557958 GACTTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366779 7 + 6628207 GACTTTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349516 7 - 5917169 GACTTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302513 7 - 10531588 GGCTTTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951945 7 + 72247402 GACTTTC i micMur3.chr20 C 0 I 3 s proCoq1.NW_012152729v1 2959008 7 + 9850184 GACTTTC i proCoq1.NW_012152729v1 C 0 I 374 s canFam3.chr5 80482812 7 + 88915250 GATTTTC i canFam3.chr5 C 0 C 0 e mm10.chr8 22486227 201 - 129401213 I e dasNov3.JH569970 943464 0 + 1009443 C e otoGar3.GL873566 13732567 125 + 13852661 I a score=415922.000000 s hg38.chr16_GL383557v1_alt 71360 35 + 89672 ACTAggc--atggtg---------actcacacctgtaatcctagca s panTro5.chr16 21502856 35 - 81586097 ACTAggc--atggtg---------actcacacctgtaatcctagca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564401 35 - 90481686 ACTAggc--atggtg---------actcacacctgtaatcctagca i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797275 35 + 3010529 ACTAggc--atgatg---------actcacacctgtaatcctagca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915684 35 + 163208435 ACTAggc--atggtg---------actcacacctgtaatcctagca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383170 35 - 74971481 ACTAggc--atggtg---------actcaaacctgtaatcccagca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095814 35 - 78541002 ACTAggc--atggtg---------actcaaacctgtaatcccagca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489448 35 + 26466322 ACTAggc--atggtg---------actcaaacctgtaatcccagca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816050 35 + 43916225 ACTAggc--atggtg---------actcaaacctgtaatcccagca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246605 35 + 75399963 ACTAggc--atggtg---------actcacacctgtaatcccagca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813813 35 - 7209941 ACTAggc--atggtg---------actcaaacctgtaatcccagca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554236 35 + 3907144 ACTAggc--atggtg---------actcacacctgtaatcccagca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552624 35 - 44557958 ACTAggc--atggtg---------gctcacacctgtaatcccagca i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366786 35 + 6628207 ACTAggc--atggtg---------gctcacacctgtaatcccagca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349523 35 - 5917169 ACTAggc--atggtg---------gctcacacctgtaatcccagca i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302520 35 - 10531588 ACTAggc--atggtg---------gctcacacctgtaatcccagca i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951955 35 + 72247402 gccgggc--atggtg---------gttcacgcctgtaatcctagca i micMur3.chr20 I 3 C 0 s canFam3.chr5 80482819 44 + 88915250 --CAGGCTGATGGAGTCTAAGCAAGTTCTCAACCATAAACTGAGCA i canFam3.chr5 C 0 I 277 e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e otoGar3.GL873566 13732567 125 + 13852661 I a score=258094.000000 s hg38.chr16_GL383557v1_alt 71395 25 + 89672 -ctttggga---ggctg-aggcaggaggat s panTro5.chr16 21502891 25 - 81586097 -ctttggga---ggctg-aggcaggaggat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564436 25 - 90481686 -ctttggga---ggctg-aggcaggaggat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797310 25 + 3010529 -ctttggga---ggctg-agacaggaggat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915719 25 + 163208435 -ctttggga---ggccg-aggcaggaggat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383205 25 - 74971481 -ctttggga---ggcca-aggcaggaggat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095849 25 - 78541002 -ctttggga---ggcca-aggcaggaggat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489483 25 + 26466322 -ctttggga---ggcca-aggcaggaggat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816085 25 + 43916225 -ctttggga---ggcca-agacaggaggat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246640 25 + 75399963 -ctttggga---ggcca-aggcaggaggat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813848 25 - 7209941 -ctttggga---ggcca-agacaggaggat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554271 25 + 3907144 -ctttggga---ggcca-aggcaggaggat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552659 25 - 44557958 -ctttggga---ggccg-tggcaggaggac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366821 24 + 6628207 --tttggga---ggccg-tggcaggaggat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349558 25 - 5917169 -ctttggga---ggctg-tggcaggaggat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302555 30 - 10531588 actctgagatagggccgatagcaggaggat i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54951990 25 + 72247402 -ctctggaa---ggcca-gggcaggaggat i micMur3.chr20 C 0 I 231 e canFam3.chr5 80482863 277 + 88915250 I e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e otoGar3.GL873566 13732567 125 + 13852661 I a score=564761.000000 s hg38.chr16_GL383557v1_alt 71420 64 + 89672 tgcttc-agcccaggagtttaaga--ccag-gatgggcaacatggtgaaaccc-tgtctctacaaaaat s panTro5.chr16 21502916 64 - 81586097 tgcttc-agcccaggagtttaaga--ccag-gatgggcaacatggtgaaaccc-tgtctctacaaaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564461 64 - 90481686 tgcttc-agcccaggagtttaaga--ccag-gatgggcaacatggtgaaaccc-tgtctctacaaaaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797335 64 + 3010529 tgcttc-agcccaggagtttaaga--ccag-gatgggcaacatggtgaaaccc-tgtctctacaaaaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915744 64 + 163208435 tgcttg-agcccaggagttcaaga--ccag-gatgggcaacacagtgaaaccc-tttctctacaaaaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383230 59 - 74971481 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacatggtgaaaccc-tgtctctaca----- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095874 59 - 78541002 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacatggtgaaaccc-tgtctctaca----- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489508 59 + 26466322 tgcttg-aacccaggagttcaaga--ccag-gctgggcaacatggtgaaaccc-tgtctctaca----- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816110 59 + 43916225 tgcttg-agcccaggagttcaaga--ccag-gctgagcaacacggtgaaaccc-tgtctctaca----- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246665 59 + 75399963 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacacggtgaaaccc-tgtctctaca----- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813873 59 - 7209941 tgcttg-agcccaggagttcaaga--ccag-gctaagcaacacggtgaaaccc-tgtctctaca----- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554296 59 + 3907144 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacacggtgaaaccc-tgtctctaca----- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552684 64 - 44557958 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacatggtgaaaccc-tatctctacaaaaat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366845 64 + 6628207 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacatggtgaaaccc-tatctctacaaaaat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349583 64 - 5917169 tgcttg-agcccaggagttcaaga--ccag-gctgggcaacatggtgaaaccc-cagctctacagaaat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302585 69 - 10531588 tgcctgcagcccaagggttcaaagacccagcgctgggcaacatggtgaaacccgtatctctacaaaaat i aotNan1.NW_018500622v1 C 0 I 43 e canFam3.chr5 80482863 277 + 88915250 I e micMur3.chr20 54952015 231 + 72247402 I e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e otoGar3.GL873566 13732567 125 + 13852661 I a score=280805.000000 s hg38.chr16_GL383557v1_alt 71484 35 + 89672 acaaaacttagctgggtgtggtggtatg----ctcctgt s panTro5.chr16 21502980 35 - 81586097 acaaaacttagctgggtgtggtggtatg----ctcctgt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564525 35 - 90481686 acaaaacttagttgggtgtggtggtatg----ctcctgt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797399 35 + 3010529 acaaaacttagctgggtgtggtggtatg----ctcctgt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915808 39 + 163208435 acaaaacttagctgggtgtggtggtatgtatactcctgt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383289 33 - 74971481 --acaacttagctgggtatggtggcatg----ctcctgt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095933 33 - 78541002 --acaacttagctgggtatggtggcatg----ctcctgt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489567 33 + 26466322 --acaacttagctgggtatggtggcatg----ctcctgt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816169 33 + 43916225 --aaaacttagctaggtatggtggcatg----ctcctgt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246724 33 + 75399963 --aaaacttagctgggtatggtggcatg----ctcctgt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813932 33 - 7209941 --aaaacttagctgggtatggtggcatg----ctcctgt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554355 33 + 3907144 --aaaacttagctaggtatggtggcatg----ctcctgt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552748 35 - 44557958 acaaaactcatctgggtgtggtggcaca----atcctgt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366909 35 + 6628207 acaaaacttagctgggtgtggtggcaca----ctcctgt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349647 35 - 5917169 acaaaacttagctgggtgtggtggcaca----ctcctgc i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80482863 277 + 88915250 I e micMur3.chr20 54952015 231 + 72247402 I e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e aotNan1.NW_018500622v1 9302654 43 - 10531588 I e otoGar3.GL873566 13732567 125 + 13852661 I a score=448597.000000 s hg38.chr16_GL383557v1_alt 71519 46 + 89672 gtact---tgg-gaggctgaggtggaaggattttctgagcctggg-gaggg s panTro5.chr16 21503015 46 - 81586097 gtact---tgg-gaggctgaggtggaaggattatctgagcctggg-gaggg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564560 46 - 90481686 gtact---tgg-gaggctgaggtggaaggattatctgagcctggg-gaggg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797434 46 + 3010529 gtact---tgg-gaggctgaggtggaaggattatctgagcctggg-gaggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915847 46 + 163208435 gtact---tgg-gaggctgaggtggaaggattatctgagcctggg-gaggg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383322 46 - 74971481 gtact---tgg-gaggctgaggtggaaggattacctgagcctggt-gaggt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21095966 46 - 78541002 gtact---tgg-gaggctgaggtggaaggattacctgagcctggt-gaggt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489600 46 + 26466322 gtact---tgg-gaggctgaggtggaaggattacctgagcctggt-gaggt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816202 46 + 43916225 gtact---tgg-gaggctgaggtggaaggattacctgagcctggt-gaggt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246757 46 + 75399963 gtact---tgg-gaggctgaggtggaaggattacctgagcctggt-gaggt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6813965 49 - 7209941 gtactacctgg-gaggctgaggtagaagcattacctgagcctggt-gaggt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554388 46 + 3907144 gtact---tgg-gaggctgaggtggaaggattacctgagcctggg-gaggt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552783 46 - 44557958 gtact---tgg-aaggctgaggtggaaggatcacctgagcctggg-gaggc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366944 46 + 6628207 gtact---tgg-gaggctgaggtggaaggatcacctgagcctggg-gaggc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349682 46 - 5917169 gtact---tgg-gaggctgaggtggaaggatcacctgagcctggg-gaggc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302697 47 - 10531588 gtact---tggagaggctga-gtggaaggatcacctaagcctggatgaggg i aotNan1.NW_018500622v1 I 43 I 91 e canFam3.chr5 80482863 277 + 88915250 I e micMur3.chr20 54952015 231 + 72247402 I e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e otoGar3.GL873566 13732567 125 + 13852661 I a score=539416.000000 s hg38.chr16_GL383557v1_alt 71565 61 + 89672 tgaggctgcagtgagccatgatcgcaccactgcactccagcctcggcaacagagtgaggcc s panTro5.chr16 21503061 61 - 81586097 tgaggctgcagtgagccatgatcgcaccactgcacgacagcctcggcaacagagtgaggcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564606 61 - 90481686 tgaggctgcagtgagccatgatcgcaccactgcacgacagcctcggcaacagagtgaggcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797480 61 + 3010529 tgaggctgcagtgagccatgatcgcaccactgcactccagcctcggcaacagagtgaggcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915893 61 + 163208435 tgaggctgcagtgagccatgatcgcaccactgcactccagcctcagcaacagagtgaggcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383368 61 - 74971481 cgaggctgcagtgagccataatcacaccactgcactccagcctcggcaacagagtgaggcc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096012 61 - 78541002 cgaggctgcagtgagccataatcacaccactgcactccagcctcggcaacagagtgaggcc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489646 61 + 26466322 cgaggctgcagtgagccataatcacaccactgcactccagccttggcaacagagtgaggcc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816248 61 + 43916225 cgaggctgcagtgagccataatcacaccactgcactccagcctcggcaacagagtgaggcc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246803 61 + 75399963 cgaggttgcagtgagccataatcacaccactgcactccagcctcggcaacagagtgaggct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814014 61 - 7209941 cgaggctgcagtgagccataatcacaccactgcactccagcctcggcaacagagtgaggcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554434 61 + 3907144 cgaggctgcagtgagccataatcacaccactgcactccagcctcggcaacagagtgaggcc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552829 61 - 44557958 tgaggctgcagtgagccataattacaccactgcacttcagccttggcaaaagagcaagacc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6366990 61 + 6628207 tgaggctgcagtgagccataatcacaccactgcacttcagccttggcaaaagagcaagacc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349728 61 - 5917169 tgaggctgcagtgagccataattacaccactgcgcttctgccttggccaaagagcaagacc i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80482863 277 + 88915250 I e micMur3.chr20 54952015 231 + 72247402 I e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e aotNan1.NW_018500622v1 9302744 91 - 10531588 I e otoGar3.GL873566 13732567 125 + 13852661 I a score=32697.000000 s hg38.chr16_GL383557v1_alt 71626 5 + 89672 atctc s panTro5.chr16 21503122 5 - 81586097 atctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564667 5 - 90481686 atctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797541 5 + 3010529 atctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915954 5 + 163208435 gtctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383429 5 - 74971481 atttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096073 5 - 78541002 atttc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489707 5 + 26466322 atttc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816309 5 + 43916225 atctc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246864 5 + 75399963 atctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814075 5 - 7209941 atctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554495 5 + 3907144 atctc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552890 5 - 44557958 ctgtc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367051 5 + 6628207 ctgtc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349789 5 - 5917169 ctgtc i cebCap1.NW_016107433v1 C 0 C 0 s canFam3.chr5 80483140 5 + 88915250 atctt i canFam3.chr5 I 277 C 0 e micMur3.chr20 54952015 231 + 72247402 I e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e aotNan1.NW_018500622v1 9302744 91 - 10531588 I e otoGar3.GL873566 13732567 125 + 13852661 I a score=1092.000000 s hg38.chr16_GL383557v1_alt 71631 4 + 89672 aaaa s micMur3.chr20 54952246 4 + 72247402 aaaa i micMur3.chr20 I 231 I 3 s canFam3.chr5 80483145 4 + 88915250 aaaa i canFam3.chr5 C 0 C 0 e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e aotNan1.NW_018500622v1 9302744 91 - 10531588 I e cebCap1.NW_016107433v1 3349794 0 - 5917169 C e panPan2.chr16 21564672 0 - 90481686 C e macNem1.NW_012011355v1 14489712 0 + 26466322 C e rheMac8.chr20 21383434 0 - 74971481 C e macFas5.chr20 21096078 0 - 78541002 C e colAng1.NW_012123265v1 554500 0 + 3907144 C e manLeu1.NW_012101698v1 6814080 0 - 7209941 C e chlSab2.chr5 58246869 0 + 75399963 C e cerAty1.NW_011999143v1 20816314 0 + 43916225 C e saiBol1.JH378225 6367056 0 + 6628207 C e calJac3.chr20 21552895 0 - 44557958 C e otoGar3.GL873566 13732567 125 + 13852661 I e nomLeu3.chr2 53915959 0 + 163208435 C e gorGor5.CYUI01000018v1 797546 0 + 3010529 C e panTro5.chr16 21503127 0 - 81586097 C a score=19724.000000 s hg38.chr16_GL383557v1_alt 71635 27 + 89672 aaaaaaaaaaaaaaaaa----------aaaaaaaaaG s panTro5.chr16 21503127 20 - 81586097 -------aaaaaaaaaa----------aaaaaaaaaG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564672 14 - 90481686 -------------aaaa----------aaaaaaaaaG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797546 22 + 3010529 -----aaaaaaaaaaaa----------aaaaaaaaaG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915959 17 + 163208435 ----------aaaaaaa----------aaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383434 16 - 74971481 -----------aaaaaa----------aaaaaaaaaG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096078 16 - 78541002 -----------aaaaaa----------aaaaaaaaaG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489712 19 + 26466322 --------aaaaaaaaa----------aaaaaaaaaG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816314 26 + 43916225 -----------aaaaaaacaaacaaacaaaaaaaaaG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246869 27 + 75399963 ---------aaaaaaaaaaaaaaaaa-aaaaaaaaaG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814080 25 - 7209941 -----------aaaaaaaaaaaaaaa-aaaaaaaaaG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554500 27 + 3907144 ---------aaaaaaaaaaaaaaaaa-aaaaaaaaaG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552895 10 - 44557958 -----------tcaaaa----------aaGA------ i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367056 10 + 6628207 -----------tcaaaa----------aaGA------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349794 10 - 5917169 -----------tcaaaa----------aaGA------ i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54952253 27 + 72247402 ---------aagaaaaaaaaaagaaa-aaaaaagaaC i micMur3.chr20 I 3 C 0 s otoGar3.GL873566 13732692 27 + 13852661 ---------aagagaaagacaggcct-atagaacaag i otoGar3.GL873566 I 125 C 0 s canFam3.chr5 80483149 27 + 88915250 caaaaAGCCACAAAAAT----------AAAGCAAAAC i canFam3.chr5 C 0 C 0 e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e dasNov3.JH569970 943464 0 + 1009443 C e aotNan1.NW_018500622v1 9302744 91 - 10531588 I a score=10920.000000 s hg38.chr16_GL383557v1_alt 71662 1 + 89672 A s panTro5.chr16 21503147 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564686 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797568 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915976 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383450 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096094 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489731 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816340 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246896 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814105 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554527 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54952280 1 + 72247402 A i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13732719 1 + 13852661 a i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80483176 1 + 88915250 A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943464 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22486227 201 - 129401213 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e aotNan1.NW_018500622v1 9302744 91 - 10531588 I e cebCap1.NW_016107433v1 3349804 0 - 5917169 C e saiBol1.JH378225 6367066 0 + 6628207 C e calJac3.chr20 21552905 0 - 44557958 C a score=151675.000000 s hg38.chr16_GL383557v1_alt 71663 22 + 89672 GTTGACTTTCCAGGCTGATGGG s panTro5.chr16 21503148 22 - 81586097 GTTGACTTTCCAGGCTGATGGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564687 22 - 90481686 GTTGACTTTCCAGGCTGATGGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797569 22 + 3010529 GTTGACTTTCCAGGCTGATGGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915977 22 + 163208435 GTTGACTTTCCAGGCTGATGGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383451 22 - 74971481 GTTGACTTTCCAGGTTGATGGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096095 22 - 78541002 GTTGACTTTCCAGGTTGATGGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489732 22 + 26466322 GTTGACTTTCCAGGTTGATGGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816341 22 + 43916225 GTTGACTTTCCAGGTTGATGGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246897 22 + 75399963 GTTGACTTTCCAGGTTGATGGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814106 22 - 7209941 GTTGACTTTCTAGGTTGATGGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554528 22 + 3907144 GTTGACTTTCCAGGTTGATGGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552905 11 - 44557958 ----------CAGGGTGATAG- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367066 11 + 6628207 ----------CAGGGTGACAG- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349804 11 - 5917169 ----------CAGGGTGATAG- i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54952281 21 + 72247402 T-TGACTTTCCAGGTTGACAGA i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13732720 19 + 13852661 tgtagctttacaa---agcaag i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486428 22 - 129401213 GTTGACAATCCAGGCTGATAAG i mm10.chr8 I 201 C 0 s canFam3.chr5 80483177 18 + 88915250 ----ACCACCAggggtatctgg i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 943465 21 + 1009443 GTTCATTTTCCAGATCAATGA- i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2959015 374 + 9850184 I e aotNan1.NW_018500622v1 9302744 91 - 10531588 I a score=94103.000000 s hg38.chr16_GL383557v1_alt 71685 10 + 89672 AGTGTAAATG s panTro5.chr16 21503170 10 - 81586097 AGTGTAAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564709 10 - 90481686 AGTGTAAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797591 10 + 3010529 AGTGTAAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53915999 10 + 163208435 AGTGTAAATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383473 10 - 74971481 AGTTTAAATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096117 10 - 78541002 AGTTTAAATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489754 10 + 26466322 AGTTTAAATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816363 10 + 43916225 AGTTTAAATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246919 10 + 75399963 AGTTTAAATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814128 10 - 7209941 AGTTTAAATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554550 10 + 3907144 AGTTTAAATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552916 9 - 44557958 AGTG-AAATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367077 9 + 6628207 ACTG-AAATG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349815 9 - 5917169 AGTG-AAATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302835 9 - 10531588 AGTG-AAATG i aotNan1.NW_018500622v1 I 91 C 0 s micMur3.chr20 54952302 9 + 72247402 -GTCTAAATG i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13732739 9 + 13852661 -atacatttg i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486450 10 - 129401213 AGTCTAAATG i mm10.chr8 C 0 C 0 s canFam3.chr5 80483197 10 + 88915250 ggtgcagttg i canFam3.chr5 I 2 I 336 s dasNov3.JH569970 943486 10 + 1009443 ACCATAAATG i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2959015 374 + 9850184 I a score=451384.000000 s hg38.chr16_GL383557v1_alt 71695 42 + 89672 ACAGTGA--AGCAGCAGCT-AAAAT-CCAGGACAAGGGAGAGGTGA s panTro5.chr16 21503180 42 - 81586097 ACAGTGA--AGCAGCAGCT-AAAAT-CCAGGACAAGGGAGAGGGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564719 42 - 90481686 ACAGTGA--AGCAGCAGCT-AAAAT-CCAGGACAAGGGAGAGGGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797601 42 + 3010529 ACAGTGA--AGCAGCAGCT-AAAAT-CCAGGACAAGGGAGAGGGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916009 42 + 163208435 ACAGTGA--AGCAGCAGCT-AAAAT-CCAGGACAAGGGAGAGGGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383483 42 - 74971481 ACAGTGA--AGAAGCAGCT-ACAAT-CCAGGACAAGGGAGAGGGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096127 42 - 78541002 ACAGTGA--AGAAGCAGCT-ACAAT-CCAGGACAAGGGAGAGGGGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489764 42 + 26466322 ACAGTGA--AGAAGCAGCT-ACAAT-CCAGGACAAGGGAGAGGGGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816373 42 + 43916225 ACAGTGA--AGCAGCAGCT-ATAAT-CCAGGACAAGGGAGAGGGGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246929 42 + 75399963 ACAGTGA--AGCAGCAGCT-ACAAT-CCAGGACAAGGGAGAGGGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814138 42 - 7209941 ACAGTGA--AGAAGCAGCT-ATAAT-CCAGGACAAGGGAGAGGGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554560 42 + 3907144 ACAGTGA--AGCAGCAGCT-ACAAT-CCAGGACAAGGGAGAGGGGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552925 39 - 44557958 ACAGTGA-----AGCAGCT-AAAAT-CCAGGACAAGGGAGAGGGGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367086 39 + 6628207 ACAGTGA-----AGCAGCT-AAAAT-CCAGGACAAGAGAGAGGGGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349824 39 - 5917169 GCAGTGA-----AGCAGCT-AAAAT-CCAAGACAAGGGAGAGGAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302844 39 - 10531588 ACAGTGA-----AGCAGCT-AAAAT-CCAGGACAACGGAGAGAGGA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54952311 39 + 72247402 ACAGGGA-----AGCAGAT-ACAAT-CCAGGGCAAGAAAGAAGAAG i micMur3.chr20 C 0 I 2 s otoGar3.GL873566 13732748 44 + 13852661 ccaaggacagtgatcagatcccaatgccacagcaagTAGGCAGA-- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486460 38 - 129401213 GTAATGA-----AGCAGCT-AAATG-CCAGG-CTAGGGACAAGGGA i mm10.chr8 C 0 C 0 s dasNov3.JH569970 943496 38 + 1009443 ACAGTGA-----AGCA-CT-CTACT-CCAGGTCAAGAAGAAGTAAA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80483207 336 + 88915250 I e proCoq1.NW_012152729v1 2959015 374 + 9850184 I a score=747902.000000 s hg38.chr16_GL383557v1_alt 71737 61 + 89672 AAGGCCCATAGGAAGTATCAAAA-------CAACTACCAGC----TTAATCTGGAAACTGAGTC----CAAGT----------CCT s panTro5.chr16 21503222 65 - 81586097 AAGGCCCATAGGAAGTATCAAAA-------CAACTACCAGCTTAATTAATCTGGAAACTGAGTC----TAAGT----------CCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564761 65 - 90481686 AAGGCCCATAGGAAGTATCAAAA-------CAACTACCAGCTTAATTAATCTGGAAACTGAGTC----TAAGT----------CCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797643 65 + 3010529 AAGGCCCATAGGAAGTATCAAAA-------CAACTACCAGCTTAATTAATCTGGAAACTGAGTC----CAAGT----------CCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916051 65 + 163208435 AAGGCTCATAGGAAGTATCCAAA-------CAACTACTAGCTTAATTAATCTGGAAACTGAGTC----TAAGT----------CCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383525 65 - 74971481 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096169 65 - 78541002 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489806 65 + 26466322 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816415 65 + 43916225 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58246971 65 + 75399963 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814180 65 - 7209941 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554602 65 + 3907144 AAGGCCCATGGGAAGTATCCAAA-------CAACTACCAGCTTAATTAAGCTGGAAACTGAGTC----TAAGT----------CCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21552964 53 - 44557958 AAGGCCCATG--------CCAAA-------CAACTAGCAGC----TTAAGCTGGAAGCTGAGTC----TAAGT----------CCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367125 61 + 6628207 AAGGCCCACAGAAAGTATCCAAA-------CAACCAGCAGC----TTAAGCTGGAAGCTAAGTC----TAAGT----------CCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349863 61 - 5917169 AAGGCCTATGGGAAGTATCCAAA-------CAACTAGCAGC----TTAAGCTGGAAGCTGAGTC----TAAGT----------CCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302883 61 - 10531588 AAGGCCCATGGGAAGTATCCAAA-------CAACTAGCAGC----TTAAGCTGGAAGCTGAGTC----TAAGT----------CCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54952352 61 + 72247402 AAGGACCATGGGAAGTATCCAAA-------GAACTACCAGC----TTAAGCTGGATACTAAGTC----TAAGT----------CCT i micMur3.chr20 I 2 I 225 s proCoq1.NW_012152729v1 2959389 61 + 9850184 AAGGGCCATGGGAAGTATCCAAA-------GAACTACCTGC----TTAAGCTGGATACTAAGTC----TAAGT----------CCT i proCoq1.NW_012152729v1 I 374 I 229 s otoGar3.GL873566 13732792 51 + 13852661 -GAGGCCAACTTAAGTAGTT--------------------C----TTAAACTGGATACTAAATCTAAGTAAGT----------CCT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486498 66 - 129401213 -CAGATCATGGAATAAATCC-----------AACTATCAAC----GTAAAGCAGATGAGAAACT----TAAGTCAACATTGCACCT i mm10.chr8 C 0 I 12 s dasNov3.JH569970 943534 62 + 1009443 AATGATCATGGGAAGAATCAAAAACTATGGTAGACATTAGT----CTAAGCTGGTTAC----------TAAGT----------CCT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80483207 336 + 88915250 I a score=1127486.000000 s hg38.chr16_GL383557v1_alt 71798 122 + 89672 TAACAGTTAGCCATAGCTAGC-TACATAGCCACAC------TCAT-TCATTAAT---ACTCACATTCTCAATGAAAACAGAAAA-ATTCTCAGGAACATTATATGAACACAGGTAATTAAACTGTATGTATAAG s panTro5.chr16 21503287 122 - 81586097 TAACAGTTAGCCATAGCTAGC-TACATAGCCACAC------TCGT-TCATTAAT---ACTCACATTCTCAAGGAAAACAGAAAA-ATTCTCAGTAACATTATATGAACATAGGTAATTAAACTGTATGTATAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564826 122 - 90481686 TAACAGTTAGCCATAGCTAGC-TACATAGCCACAC------TCGT-TCATTAAT---ACTCACATTCTCAAGGAAAACAGAAAA-ATTCTCAGTAACATTATATGAACATAGGTAATTAAACTGTATGTATAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797708 120 + 3010529 TAACAGTTAGCCATAGCTAGC-TACATAGCCACAC------TCGT-TCATTAAT---ACTCACATTCTCAAGGAAAAC--AAAA-ATTCTCAGGAACATTGTATGAACACAGGTAATTAAACTGTATGTATAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916116 118 + 163208435 TAAC----AGCCATAGCTAGC-TACATAGCCACAC------TTGT-TCATTAAT---ACTCACATTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGAACACAGATAATTAAACTGTATGTGTAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383590 118 - 74971481 TAGC----AGCCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT---AATCACGTTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGCAATTAAACTGCATGTATAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096234 118 - 78541002 TAGC----AGCCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT---AATCACGTTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGCAATTAAACTGCATGTATAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489871 118 + 26466322 TAGC----AGCCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT---AATCACGTTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGCAATTAAACTGCATGTATAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816480 118 + 43916225 TAGC----AGCCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT---AATCACGTTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGCAATTAAACTGCATGTATAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247036 114 + 75399963 TAGC----AGCCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT-------ACGTTCTCAAGAAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGCAATTAAACTGCATGTATAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814245 118 - 7209941 TAGC----AGTCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT---AATCACGTTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGCAATTAAACTGCATGTATAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554667 118 + 3907144 TAGC----AGCCATAGCTAGC-TACACAGCCACAC------TCAT-TCATTAAT---ACTCACATTCTCAAGGAAAACAGAAAA-ATTCTCAGGAACATTAAATGACCACAGGTAATTAAACTGCATGTATAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553017 119 - 44557958 TAACAGTTAGCCATAGCTAGC-TACATAGACACAC------TCACGTTAATAAT---ACTCATATTCTCAAGGAAAGTCGAAAA-ATGGTCAGGAACATTAAATG----CAGGTAATTAAACTGTATGTATAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367186 119 + 6628207 TAACAGTTAGCCATAGCTAGC-TACGTAGACAAAC------TCATGTTAATAAT---ACTCATATTCTCAAGGAGAATAGAAAA-ATGGTCAGGAACATTAAATG----CGGGTAATTAAACTGTATGTAAAAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3349924 119 - 5917169 TAACAGTTAGCCATAGCTAGC-TATATAGGCACAC------TCATGTTAATAAT---ACTCATATTCTCAAGGAAAATAGAAAA-ATGGTCAGGAACATTAAATG----CAGGTAATTAAACTGTATGTAGAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9302944 119 - 10531588 TAACAGTTAGCCATAGCTACC-TACATAGATACAT------TCATGTTAATAAT---ACTCATATTCTCCAGGAAAATAGAAAA-ATGGTCAGGAACATTAAATG----CAGGTAATTAAACTGTATGTATAAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732843 115 + 13852661 CATCAGTTAACT-CAGCTA---CACACAGCCATAC------TCAC-AC----AC---ACTCATGCTCTCAAAGAACACTGAAAA-AGAGTCAAGAACATTAAATGAACATAGGTAAGGAAATGGTATGTATTAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486576 117 - 129401213 TAAT--TCAGCATTAGCTGGTGTGTATAGCAATG--------CAT-CCGGTGATGCAATCCATGTTCTCACAGAACACAAAAGACAGTCACAAGGACA---AATGACCCCA---AATAAAACTATACGCACAAC i mm10.chr8 I 12 C 0 s dasNov3.JH569970 943596 116 + 1009443 ----------CAGTAATTACC-TACATACATATACCGTAAGTCAT-TCACACAT---ATTCATGTTCTCAagtaacatggaaaa-atggttataagatttaaattaa--cagataatggaactatatgtataag i dasNov3.JH569970 C 0 I 5 e canFam3.chr5 80483207 336 + 88915250 I e micMur3.chr20 54952413 225 + 72247402 I e proCoq1.NW_012152729v1 2959450 229 + 9850184 I a score=86334.000000 s hg38.chr16_GL383557v1_alt 71920 8 + 89672 AATACTTT s panTro5.chr16 21503409 8 - 81586097 AATACTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564948 8 - 90481686 AATACTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797828 8 + 3010529 AATACTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916234 8 + 163208435 AATACTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383708 8 - 74971481 AATACTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096352 8 - 78541002 AATACTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489989 8 + 26466322 AATACTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816598 8 + 43916225 AATACTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247150 8 + 75399963 AATACTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814363 8 - 7209941 AATACTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554785 8 + 3907144 AATACTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553136 8 - 44557958 GATACTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367305 8 + 6628207 GATACTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350043 8 - 5917169 GATACTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303063 8 - 10531588 GATACTTT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732958 8 + 13852661 CATATGAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22486693 8 - 129401213 AATATTTT i mm10.chr8 C 0 I 535 e canFam3.chr5 80483207 336 + 88915250 I e micMur3.chr20 54952413 225 + 72247402 I e proCoq1.NW_012152729v1 2959450 229 + 9850184 I e dasNov3.JH569970 943712 5 + 1009443 I a score=2082910.000000 s hg38.chr16_GL383557v1_alt 71928 234 + 89672 T-Gggccaggcacagtggctcatgcctataatctcagctggga-gggcaggatgggaggatcacttgaccccaggagttcaagaccaactttgtcaacataatgagaccccgtctctac--aaaaaaa-atgaaaaaattagctgggcatagtggtgagtgtctatagtcccagctactcaggatgctgagatggg-aagataacttgagcccaagaggtcgaggtggcagccatctat-g s panTro5.chr16 21503417 235 - 81586097 TGGggccaggcacagtggctcatgcctataatctcagctggga-gggcaggatgggaggatcacttgaccccaggagttcaagaccaactttgtcaacataatgagaccccgtctctac--aaaaaaa-atgaaaaaattagctgggcatagtggtgagtgtctatagtcccagctactcaggatgctgagatggg-aagataacttgagcccaagaggtcgaggtggcagccatctat-g i panTro5.chr16 C 0 C 0 s panPan2.chr16 21564956 236 - 90481686 TGGggccaggcacagtggctcatgcctataatctcagctggga-gggcaggatgggaggatcacttgaccccaggagttcaagaccaactttgtcaacataatgagaccccgtctctac-aaaaaaaa-atgaaaaaattagctgggcatagtggtgagtgtctatagtcccagctactcaggatgctgagatggg-aagataacttgagcccaagaggtcgaggtggcagccatctat-g i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 797836 233 + 3010529 T-Gggccaggcacagtggctcatgcctataatctcagctggga-gggcaggatgggaggatcacttgaccccaggagttcaagaccaactttgtcaacataatgagaccccgtctctac--aaaaaaa-atg-aaaaattagctgggcatagtggtgagcgtctatagtcccagctactcaggatgctgagatggg-aagataacttgagcccaagaggtcgaggtggcagcgatctat-g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916242 235 + 163208435 T-GAgccaggcacagtggctcatgcctataatctcagctggga-gggcaggatgggaagatcacttgaccccagtagttcaagaccaactttgtcaacataatgagaccccgtctctac--aaaaaaa-attaaaaaattagccgggcataacggtgggcatctgtagtcccagctactcaggatgctgagatgggaaagataacctgagcccgagaggtcgaagtggcagcgatctat-g i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383716 234 - 74971481 T-Ggggcaggcacagtggctcatgcctataatctcagttggga-gggcaggatgggaggatcacttgagcccaggagttcaagaccaaccctgtcaacataatgag--cccatctctacaaaaaaaaa-attaaaaaattagctgggcatagtggtgggcgtctgtagtcccagctactcaggatgctgagatagg-aagataacttgagcccaggaggtcgaggtggcagtgatctat-g i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096360 234 - 78541002 T-Ggggcaggcacagtggctcatgcctataatctcagttggga-gggcaggatgggaggatcacttgagcccaggagttcaagaccaaccctgtcaacataatgag--cccatctctacaaaaaaaaa-atgaaaaaattagctgggcatagtggtgggcgtctgtagtcccagctactcaggatgctgagatagg-aagataacttgagcccaggaggtcgaggtggcagtgatctat-g i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14489997 234 + 26466322 T-Gggccaggcacagtggctcatgcctataatctcagttggga-gggcaggatgggaggatcacttgagcccaggagttcaagaccaaccctgtcaacataatgag--cccatctctacaaaaaaaaa-atgaaaaaattagctgggcatagtggtgggcgtctgtagtcccagctactcaggatgctgagatagg-aagataacttgagcccaggaggtcgaggtggcagtgatctat-g i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816606 234 + 43916225 T-Gggccaggcacagtggctcatgcctataatctcagttggga-gggcaggatgggaggatcacttgagcccaggagttcaagaccaaccctgtcaacataatgag--cccatctctacaaaaaaaaa-atgaaaaaattagctgggcatagtggtgggcatctgtagtcccagctactcaggatgctgagatagg-aagataacttgagcccaggaggtcgaggtggcagttatctat-g i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247158 234 + 75399963 T-Gggccaggcacagtggctcatgcctataatctcagttggga-gggcaggatgggaggatcacttgagcccaggagttcaagaccaaccttgtcaacataatgag--cccatctctacaaaaaaaaa-atgaaaaaattagctgggcatagtggtgggcgtctgtagtcccagctactcaggatgctgagatggg-aagataacttgagcccaggaggtcgaggtggcagtgatctat-g i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814371 234 - 7209941 T-Gggccaggcacagtggctcatgcctataatctcagttggga-gggcaggatgggaggatcacttgagcccaggagttcaagaccaaccctgtcaatataatgag--cccatctctacaaaaaaaaa-atgaaaaaattagctgggcatagtggtgggcgtctgtagtcccagctactcaggatgctgagatagg-aaggtaacttgagcccaggaggtcgaggtggcagtgatctat-g i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 554793 233 + 3907144 T-GTgccaggcacagtggctcatgcctataatctcagttgggaggggcaggatgggaggatcacttgagtccaggagttcaagaccaaccttgtcaacataatgag--cccatctctac--aaaaaaa-atgaaaaaattagctgggcatagtggtaggcgtctgtagtcccggctactcaggatgctgagatggg-aagataacttgagcccaggaggtcgaggtggcagtgatctat-g i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553144 234 - 44557958 T-Gggccaggcacaatgcctcatgcctatcatctcagctagga-ggccaggatgggaggatcacttgagtcctggagttcaaaaccaacctgggcaacataatgagctcccatatctac--aaaaaaa-ttttttaaattaggcaggcacagtggtgtgcatctgtagtcccagctacaca-gatgctgagatggg-aggatcacttaagcccaggaggttgaggtggcagtgaTCTATGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367313 236 + 6628207 T-Gggccaggcacactgcctcatgcctatcatctcagctagga-ggtcaggatgggaggatcacttgagcccaggagttcaaaaccaacctgggcaacataatgagcccctgtatctacaaaaaaaaa-atctaaaaattaggtggacacagtggtatgcatctgcagtcccagctacacaggatgctgagatggg-aggatcacttaagcccaggaggtcaaggtggcagtgatctat-g i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350051 237 - 5917169 T-Gggccaggcacaatgcctcatgcctatcatctcagctagga-ggccaggatgggaggatcacttgagcccacgagttcaaaaccaacctaggcaacataatgagcccctatatcaacaaaaaaaaattttttttaattaggtgggcacagtggtgtgcatctatagtcccagctacacaggatgctcagatggg-aggatcacttaagcccaggaggtcgaggtggcagtgatctat-g i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303071 235 - 10531588 T-Gggccaggcacgatgcctcatgcctatcatctcagatagga-ggccaggatggggggatcacttgagcccaggagttcaaaaccaacctgggcaacataatgagcccccatatctac-aaaaaaaa-ccttaaaaattaggcgggcacagtggtgtgcatctgcagtcccagctatacaggatgctgagatggg-aggatcacttaagcccaggaggtcgaggtggcagtaatctat-g i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13732966 68 + 13852661 G-------------------------------------------GCGTAGGTTGG--------------CCCATGA-------AAAAAACTTTTTAATGTAA-------------------ATAAGAA-GCT---------GTTGTGTATA----------------------------------------------AAGAC--------------------------------TCTTT-- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80483207 336 + 88915250 I e micMur3.chr20 54952413 225 + 72247402 I e mm10.chr8 22486701 535 - 129401213 I e proCoq1.NW_012152729v1 2959450 229 + 9850184 I e dasNov3.JH569970 943712 5 + 1009443 I a score=43365.000000 s hg38.chr16_GL383557v1_alt 72162 4 + 89672 attg s panTro5.chr16 21503652 4 - 81586097 attg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565192 4 - 90481686 attg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798069 4 + 3010529 attg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916477 4 + 163208435 atTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383950 4 - 74971481 attg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096594 4 - 78541002 attg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490231 4 + 26466322 attg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816840 4 + 43916225 attg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247392 4 + 75399963 attg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814605 4 - 7209941 attg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555026 4 + 3907144 attg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553378 4 - 44557958 ATTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367549 4 + 6628207 attg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350288 4 - 5917169 attg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303306 4 - 10531588 attg i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80483543 4 + 88915250 aata i canFam3.chr5 I 336 C 0 e micMur3.chr20 54952413 225 + 72247402 I e mm10.chr8 22486701 535 - 129401213 I e proCoq1.NW_012152729v1 2959450 229 + 9850184 I e dasNov3.JH569970 943712 5 + 1009443 I e otoGar3.GL873566 13733034 0 + 13852661 C a score=116939.000000 s hg38.chr16_GL383557v1_alt 72166 15 + 89672 taccTTTTTATGAAC s panTro5.chr16 21503656 15 - 81586097 taccTTTTTATGAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565196 15 - 90481686 taccTTTTTATGAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798073 15 + 3010529 taccTTTTTATGAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916481 15 + 163208435 TACCTTTTTATAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383954 15 - 74971481 taccTTTTTATAAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096598 15 - 78541002 taccTTTTTATAAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490235 15 + 26466322 taccTTTTTATAAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816844 15 + 43916225 taccTTTTTATAAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247396 15 + 75399963 taccTTTTTATAAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814609 15 - 7209941 TAACTTTTTATAAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555030 15 + 3907144 taccTTTTTATAAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553382 11 - 44557958 TACCTTTTTAT---- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367553 11 + 6628207 taccTTTTTAT---- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350292 11 - 5917169 taccTTTTTAT---- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303310 11 - 10531588 taccTTTTTAT---- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733034 15 + 13852661 CAACTTTATATAAAC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80483547 14 + 88915250 aacctttattaaaa- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943717 14 + 1009443 tacatatgtatgaa- i dasNov3.JH569970 I 5 C 0 e micMur3.chr20 54952413 225 + 72247402 I e mm10.chr8 22486701 535 - 129401213 I e proCoq1.NW_012152729v1 2959450 229 + 9850184 I a score=1368363.000000 s hg38.chr16_GL383557v1_alt 72181 100 + 89672 AAACAACCAAAAAAGGCAACATGCCCACAAAATACTTATATACAAAT-ACATATTAGAAA-ATACCAAaatattaatggtagctatttctgggtgtcaggat s panTro5.chr16 21503671 100 - 81586097 AAACAACCAAAAAAGGCAACATGCCCACAAAATACTTATATACAAAT-ACATATTAGAAA-ATACCAAaatattaatggtagctatttctgggtgtcaggat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565211 100 - 90481686 AAACAACCAAAAAAGGCAACATGCCCACAAAATACTTATATACAAAT-ACATATTagaaa-ataccaaaatattaatggtagctatttctgggtgtcaggat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798088 100 + 3010529 AAACAACCAAAAAAGGCAACATGCCCACAAAATACTTATATACAAAT-ACATATTagaaa-ataccaaaatattaatggtagctatttctgggtatcaggat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916496 98 + 163208435 AAACAACCAAAAAAGGCAACATGCCCACAAAATACTTACATACAAAT-ACATATTAGAAA-ATATC--AATATTAATGGTAGCTATTTCTGGGTATCACGAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21383969 100 - 74971481 AAACAACCAAAAAAAGCAACATGCCCACAAAATACGTATATACAAAC-ACATATTAGAAA-ATACCAAAATATTAATGGTAGCTATTTCTGGGTATCAGGAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096613 100 - 78541002 AAACAACCAAAAAAAGCAACATGCCCACAAAATACGTATATACAAAC-ACATATTAGAAA-ATACCAAAATATTAATGGTAGCTATTTCTGGGTATCAGGAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490250 100 + 26466322 AAACAACCAAAAAAAGCAACATGCCCACAAAATACGTATATACAAAC-ACATATTAGAAA-ATACCAAAATATTAATGGTAGCTGTTTCTGGGTATCAGGAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816859 100 + 43916225 AAACAACCAAAAAAAGCAACATGCCCACAAAATACTTATATACATAC-ACATATTAGAAA-ATACCAAAATATTAATGGTAGCTATTTCTGGGTATCAGGAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247411 100 + 75399963 AAACAACCAAAAAAAGCAACATGCCCACAAAATACTTAAATACACAC-ACATATTAGAAA-ATACCAAAATACTAATGGTAGCTGTTTCTGGGTATCAGGAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814624 100 - 7209941 AAACAACCAAAAAAAGCAACATGCCCACAAAATACTTATATACAAAC-ACATATTAGAAA-ATACCAAAATATTAATGGTAGCTATTTCTGGGTATCAGGAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555045 100 + 3907144 AAACAACCAAAAAAAGCAACATGCCCAAAAAATACTTATATACAAAC-ACATATTAGAAA-ATACCAAAATATTAATGGTAACTGTTTCTGGGTATCAAGAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553393 94 - 44557958 AAACCACCAAAAAAGGCAACATGCCCACAAAATACTTACATACAAATAATATTTTAGAAA-ACACCAAAATATTAATGGTAGCTAT-------TGTCAGGAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367564 93 + 6628207 AAACCACCAAAAAAGGCAACATGCCCACAAAATACTTACATATAAAT-ACCTATTAGAAA-ACATCAAAATATTAATGGTAGCTAT-------TGTTAGGAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350303 88 - 5917169 AAACCACCAAAAAAGGCAATATGCCC-CAAAATACTTATATACAAAT-ACAT----GAAA-ACATCAAAATATTAATGGAAGCTAT-------TGTCAGGAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303321 93 - 10531588 AAACCACCAAAAAAGGCAACATGCCCACAAAATACTTACTTACAAAT-ACATATTAGAAA-ACACCAAAATATTAATGGTAGCTAT-------TGTCAGGAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54952638 95 + 72247402 AAACAACCAAAAAA-GTAACATGCCCACAAAATAC----ATACAAAC-ACATACTGTaat-atatcgaaatattaatggcagctatttctgggtggcaagat i micMur3.chr20 I 225 C 0 s proCoq1.NW_012152729v1 2959679 95 + 9850184 AAACAACCAAAAAA-GTAACATGCCCACAAAatac----atacaaac-atatattggaaa-atatcaaaatattaatggcagctatttctgggtggcaggat i proCoq1.NW_012152729v1 I 229 C 0 s otoGar3.GL873566 13733049 95 + 13852661 AAATAGCCAAAAAA-GTAACATGCCCACAAAATCC----ATCCCAAC-ACATACTggaaa-ataccaaagtactaatggcaggtatttctgggtggcaggat i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80483561 99 + 88915250 aaaTAAAATAAAAACAAAAAAAGTCTAAAAAATACCTCTGTACAA---ACATGTCAgaaatacacaaaaatattaatggcagttgtttctggatgtcaggat i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943731 95 + 1009443 -----aacaaactaaacacaatgtccacaaaatacctaca-acaaac-acatattggaaatacaccaaaatattaacagtagttatttctaggtgtcaggat i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22486701 535 - 129401213 I a score=4724551.000000 s hg38.chr16_GL383557v1_alt 72281 289 + 89672 tgcaaatgactttaactttcttcttGTTCTGCTAAC-AAACT------AAGGATGATGAAATTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACAGCAAACATGTGAGTGAG---TGTATCTGCAGGG-T-AGGAGGAACATGAGGGAACCCCCGACA------TGGAG----GCTTAAAA------GCAA-AAAAGTTACATCTTAGACAC-GACAAGTCTCCCC-ATGGCCAGTTA s panTro5.chr16 21503771 289 - 81586097 tgcaaatgactttaactttcttcttGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACAGCAAACATGTGAGTGAG---TGTATCTGCAGGG-T-AGGAGGAACATGAGGGAACCCCCGACA------TGGAG----GCTTAACA------GCAA-AAAAGTTACATCTTAGACAC-AACAAGTCTCCCC-ATGGCCAGTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565311 289 - 90481686 tgcaaatgactttaactttcttcttgttctgCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACAGCAAACATGTGAGTGAG---TGTATCTGCAGGG-T-AGGAGGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAACA------GCAA-AAAAGTTACATCTTAGACAC-GACAAGTCTCCCC-ATGGCCAGTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798188 289 + 3010529 tgcaaatgactttaactttcttcttcttctgCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACAGCAAACATGTGAGTGAG---TGTATCTGCAGGG-T-AGGAGGAACATGAGGGAACCCCCGACA------TGGAG----GCTTAAAA------GCAA-AAAAGTTACATCTTAGACAC-GACAAGTCTCCCC-ATGGCCAGTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916594 289 + 163208435 TGCAAATGACTTTAACTTTCTTCTTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATGTGAGTGAG---TTTATCTGCAGGG-T-AGGAGGAACATGAGGGAACCCCCGACA------TGGAG----GCTTAAAA------GCAA-AAAAGTTACATCTTAGACAG-GACAAGTCTCCCC-ATGGCCAGTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384069 289 - 74971481 TGCATACGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCATATCTCATCGAGAGTCTTCTTCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATATGAGTGAG---TGGATCTGTAGGG-T-ACGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCCCC-ATGGCCAATTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21096713 289 - 78541002 TGCATACGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCATATCTCATCGAGAGTCTTCTTCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATATGAGTGAG---TGGATCTGTAGGG-T-AGGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCCCC-ATGGCCAATTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490350 289 + 26466322 TGCATACGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCATATCTCATCGAGAGTCTTCTTCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATATGAGTGAG---TGGATCTGTAGGG-T-AGGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCCCC-ATGGCCAATTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20816959 288 + 43916225 TGCATACGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCATATCTCATCGAGAGTCTTCTTC-GCCAGCTATCTCCTCCTACTTGAAACTGCAAACATATGAGTGAG---TGGATCTGTAGGG-T-AGGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCCCC-ATGGCCAATTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247511 289 + 75399963 TGCATACGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCTTCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATATGAGTGAG---TGGATCTGTAGGG-T-AGGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCTCC-ATGGCCAGTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6814724 288 - 7209941 TGCATACGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCATATCTCATCGAGAGTCTTCTTC-GCCAGCTATCTCCTCCTACTTGAAACTGCAAACATATGAGTGAG---TGGATCTGTAGGG-T-AGGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCCCC-ATGGCCAATTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555145 289 + 3907144 TGCAAATGACTTTAACTTTCTTCGTGTTCTGCTAAC-AAACT------AAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATGTGAGTGAG---TGGATCTGTAGGG-T-AGGAAGAACATGAGGGAACCCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTCAGACAT-GACAAGTCTCTCC-ATGGCCAGTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553487 288 - 44557958 TA-AAATAATTTTAACTTTCTTCTTGCTCTGTTAAC-AAACT---AAGAAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGACCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATGTGAGTGAG---TGGATCTGCAGGG-T-AGGAGGAACACAAGGGAACTCCCAACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTTAGAC----ACAAGTCTCCCC-ATGGCCAGTTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367657 288 + 6628207 TA-AAATAATTTTAACTTTCTTCTTGCTCTGCTAAC-AAACT---AAGAAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAGCATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATCTGAGTGAG---TGGATCTGCAGGG-T-AGGAGGAACACGAGGGAACTCCCGACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTTAGAC----GCAAGTCTCCCC-ATGGCCAGTTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350391 291 - 5917169 TA-AAATGATTTTAACTTTCTTCTTGCTCTGCTAAC-AAACT---AAGAAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------TCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAACATGTGAGTGAG---TGGATCTGCAGGG-T-AGGAGGAACACGAGGGAACTCCCGACA------TGGAG----GCTTAAAA------GGAA-AAAAGTTACATCTTAGACAC-GACAAGTCTCCCC-ATGGCCAGTTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303414 291 - 10531588 TA-AAATGATTTTAACTTTCTTCTCGCTCTGCTAAC-AAACT---AAGAAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAAGAACATTGCAGATCTCATCGAGAGTCTTCATCTGCCAGCTATCTCCTCCTACTTGAAACTGCAAATATGTGAGTGAG---TGGATCTGCAGGG-T-AGGAGGAACACGAGGGAACTCCTGACA------TGGAG----ACTTAAAA------GGAA-AAAAGTTACATCTTAGACAC-GACAAATCTCCCC-ATGGCCAGTTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54952733 292 + 72247402 cacacatcattttaactttctttttgttctgCTAACAAAACT------AAGGATGATGAAACTTCTCTGGTCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAGGAACATTTCAGATCTCATCTAGTGTCTTCATCTGCCAGATATGTCCTCCTACTTCAAATTGCAAACATGTGAGTGAA---TGTATTTGCAGAG-T-GGGAAGAACATGAGGGAACCCCCGACA------GTGAG----GTTTAAAA------GGGGAAAAAGTCACATATCAGACACAGATAACTCTCCTT-GTGGCCAGTTG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2959774 296 + 9850184 tacagatctttttaactttcttctcgttctGCTAACAAAACTC-TGAGAAGGATGATGAAACTTCTCTGGTCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAGGAACATTTCAGATCTCATCTAGCGTCTTCATCTGCCAGATATGTCCTCCTACTTCAAATTGCAAACATGTGAGTGAA---TGTATTTGCAGAG-T-GGGAAGAACATGAGGGAACCCCCGACA------GTGAG----GTTTAAAA------GGGG-AAAAGTCACATCTTAGACACAGACAACTCTCCCT-GTGGCCAGTTA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13733144 302 + 13852661 tacagatgactttaactttcttcttgttttgCTAACAAAACTC-TAAGAAGGATGATGAAACTTCTCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAGGAACATTTCAGATCTCATCTAGTGTCTTCATCTGCCAGATATGTCCTCCTACTTCAAATTGCAAACATGAGAGTGAG---TCTATTTCCAGAG-T-GGGAAGAACATGAGGGAACCCCCACCACCCATGCTAAG----GTTTAAAA------TGGG-AAAAGTCTCATCTTAGACACAGACAACTCTCCCT-GTGCCCAGTTA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22487236 283 - 129401213 TACAGATGACTTTTACTGCTTTCTAACTCTGCTAACAAAAGC------AAGCATGATGAAACTTCTCTGGTCCCAAATAAGGAAACAAGAAC--------CCAGTGAGAAAAGAGT---AGGTGTGAGGAACAGTTCAGATCTCGTCGCGCGTGTTCATCTGCCAGATATCCCCTCCTACTT-AACCTGCAAACATAGGAGTGAG---TGTATCTGCAGGG-T-GCGAAGAGCACCAG----CACCCCACG------CTGGG----TCTAAAAA------GCAG-GGCA-CCACCCTGGAGACACTAAGAAGTCTCTC---TGTCCAGTTA i mm10.chr8 I 535 I 120 s canFam3.chr5 80483660 296 + 88915250 tacagaggattttaactttcttcttgctctgCTAACAAAACTC-TAGGAAGGGTGATGAAACT--TCTGGCCCCAAATAAGGAATCAAAAAC--------CCAGTGAGAAAAGAGT---AGGTGTAAGGAACATTTCAGATCTCGTCAAGCGTTTTCACGTGCCAGATATCTCCTCCTACTTTAAATTGCAAACATGTGAGT---------ATTTGCAGGGCT-GAGAAGAGCATTAGGGAA-TCCCAACA------ATGAGTGATGTTTAAAAAGGGGGGAGA-AAAAGATACA---CAGAGACTGACAACTCTCTCCTTTGTCCAGTTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 943826 311 + 1009443 cacagacgattttaactttcttcttgctctgCTAACAAAACTCTTAAGAAGGGTGGTGAAACTTCTTTGGCCCCAAATAATGAATGAAAAATATCAGTGATCAGTGAGTAAAGATTATGAGGTGTGTGGAACATTTCAGATATCATCAAGTGTCTTCATTTACCAGGTAT---CTCCAAATTTAAATTGCAAACATGTAAGTAAGTGTTGTACCTGCAGGG-TGGGGAAAAGCATTAGTGAAGGTAGGACA------ATGAG----GTTTAAGAAGG---GGAA-AAAAAGATCATCTTAGATACCGACGCTTCTCTC--ATGGCCAGTTC i dasNov3.JH569970 C 0 C 0 a score=3472520.000000 s hg38.chr16_GL383557v1_alt 72570 178 + 89672 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG s panTro5.chr16 21504060 178 - 81586097 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565600 178 - 90481686 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798477 178 + 3010529 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53916883 178 + 163208435 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384358 178 - 74971481 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCCGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCACAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097002 178 - 78541002 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCCGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCACAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490639 178 + 26466322 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCCGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCACAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817247 178 + 43916225 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCCGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCACAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247800 178 + 75399963 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAACATGCAGGTGCTTGAAGCTTCCTCCCGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCACAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815012 178 - 7209941 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCCGACAGCTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCACAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555434 178 + 3907144 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGTTGAACAATATGCAGAGCTCCTTGATTTGATGCCACAAAGAGCTTTGTTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGGTGGCATTTTGGAAACCTTTGGGTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553775 178 - 44557958 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCGTGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAAAGATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCCTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6367945 178 + 6628207 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGTTGAACGATATGCAGAGCTCCTAGATTTGAAGCTACAAAGAGCTTTGTTGAGTCCTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350682 178 - 5917169 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACGATATGCAGAGCTCCTTGATTTGATGCTACAAAGAGCTTTGTAGAATCCTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303705 178 - 10531588 CCAG----------------------------------------------------------ATTCCCACCTGACTGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTCCTGACAGCTGAACGATATGCAGAGTTCCTTGATTTGATGCTACAAAGAGCTTTGTTGAATCCTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTTGGGTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953025 178 + 72247402 CCAA----------------------------------------------------------ATTCCCACCTGACAGAGGCTGGAAAGCATGCAGGTGCTTGAAGCTTCCTTCCACCAGCTGCATGATATGTAGAGACCCTTGATTTGATGCCACAAATAGCTTTGTTGAATCTTCAGAAAACAAGATCTGAAGGGCAGAGCGAAGGAACGCTGGCATTTTGGAAACCTTTGGGTG i micMur3.chr20 C 0 I 58 s proCoq1.NW_012152729v1 2960070 178 + 9850184 CCAA----------------------------------------------------------ATTCCCACCTGACAGAGGCTGGAAAGCATGTAGGTGCTTGAAGCTTCCTTCCAACAGCTGCAGGATATGTAGAGACCCTTGATTTGATGCCACAAATAGCTTTGTTGAATCTTCAGAAAACAAGATCTGAAGGGCAGAGCGAAGGAACGCTGGCATTTTGGAAACCTTTGGGTG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13733446 178 + 13852661 CCAA----------------------------------------------------------ATTCCCACCTGACGGAGGCTGGAAAGTATGTAGGTGCTTGAAGCTTCCTTCCAACAGCTGCATGACATGGAGAGACCCTTGATTTGATGCCACAAAGAGCTTTGCTGAATCTTCAGAAAACAAAATATGAAGGGCAGAGTGAAGGAACGCTGGCATTTTGGAAACCTTTGGTGG i otoGar3.GL873566 C 0 I 6 s mm10.chr8 22487639 236 - 129401213 ccagggctacacagagaaaccctgtctcaaaaacaaaaACAAAAACAAAACAACAAAAAAGAATCCCCACCTGACTGCGGCTGGAAAGTATGCAAGTGCTTGAAGCTTCCTTCCGACAGATGAACAATATGCAGAGACCCTTGATTGGATGCCACAAGGAGCTTTGTTGAATCTTCAGAAAACAGAATATGAAGGGCAGAGCGCAGGAATGATGGCAATTTGGAAACCTTTGGATA i mm10.chr8 I 120 C 0 s canFam3.chr5 80483956 178 + 88915250 CCAA----------------------------------------------------------GTTCCCACCTGACTGAGGCTGAAAAGTATGCAGGTGCTTGAAGCTTCCTTCCAACAGGCGAATAATATGTAGAGACCCTTGATTTGATGCCACAAAGAGCTTAGCTGAATCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAATGCTGGCATTTTGGAAACCTTGGGGTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 944137 178 + 1009443 CCAA----------------------------------------------------------ATTCCCACCTGACTGGGGCTGGAAAGTATGCAGGTGCTTGAAGCTTCCTTCCAATAGCTGAATGATATGTAGAGATCCTTGATTTGATGCCACAAAAAGCTTTGTTGAGTCTTCAGAAAACAAAATCTGAAGGGCAGAGCGAAGGAACGTTGGCATTTTGGAAACCTTAGGGTC i dasNov3.JH569970 C 0 C 0 a score=293428.000000 s hg38.chr16_GL383557v1_alt 72748 26 + 89672 AACCAATAATAAA--AGCCAGTGAGAGA s panTro5.chr16 21504238 26 - 81586097 AACCAATAATAAA--AGCCAGTGAGAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565778 26 - 90481686 AACCAATAATAAA--AGCCAGTGAGAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798655 26 + 3010529 AACCAATAATAAA--AGCCAGTGAGAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917061 26 + 163208435 AACCAATAATAAC--AGCCAGTGAGAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384536 22 - 74971481 AACCAATAATAAA------AGTGAGAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097180 22 - 78541002 AACCAATAATAAA------AGTGAGAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490817 22 + 26466322 AACCAATAATAAA------AGTGAGAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817425 22 + 43916225 AACCAATAATAAA------AGTGAGAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58247978 22 + 75399963 AACCAATAATAAA------AGTGAGAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815190 22 - 7209941 AACCAATAATAAA------AGTGAGAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555612 22 + 3907144 AACCAATAATAAA------AGTGAGAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553953 26 - 44557958 AACCAATAATAAA--AGCCAGTGAGAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368123 26 + 6628207 AACCAATAACAAA--AGCCAGTGAGAGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350860 26 - 5917169 AACCAGTAACAAA--AGCCAGTGAGAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303883 26 - 10531588 AACCAGTAATAAA--AGCCAGTGAGAGA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2960248 26 + 9850184 GAACAATGGTAGA--AGCTAGTGAGAGA i proCoq1.NW_012152729v1 C 0 I 32 s otoGar3.GL873566 13733630 21 + 13852661 AAACAGT-----A--AGCTCGTAAGAGA i otoGar3.GL873566 I 6 I 2 s mm10.chr8 22487875 26 - 129401213 AATCAATGGTGAA--AGCTGGTGAGAGA i mm10.chr8 C 0 C 0 s canFam3.chr5 80484134 27 + 88915250 AACCAGTAGGAAA-AAACCAGTAAGACA i canFam3.chr5 C 0 I 4 s dasNov3.JH569970 944315 28 + 1009443 AAACAACAGTAAGTCAGTAAGTCAGAAA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54953203 58 + 72247402 I a score=388167.000000 s hg38.chr16_GL383557v1_alt 72774 29 + 89672 AGGGAGACCTACAGCCCATCAGAAACAAT s panTro5.chr16 21504264 29 - 81586097 AGGGAGACCTACAGCCCATCAGAAACAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565804 29 - 90481686 AGGGAGACCTACAGCCCATCAGAAACAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798681 29 + 3010529 AGGGAGACCTACAGCCCATCAGAAACAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917087 29 + 163208435 AGGGAGACCTACAGCCCAACAGAAACAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384558 29 - 74971481 AGGGAGACCTACAGCCCATCAGAAACAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097202 29 - 78541002 AGGGAGACCTACAGCCCATCAGAAACAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490839 29 + 26466322 AGGGAGACCTACAGCCCATCAGAAACAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817447 29 + 43916225 AGGGAGACCTACAGCCCATCAGAAACAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248000 29 + 75399963 AGGGAGACCTACAGCCCATCAGAAACAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815212 29 - 7209941 AGGGAGACCTACAGCCCATCAGAAACAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555634 29 + 3907144 AGGGAGACCTACAGCCCATCAGAAACAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21553979 29 - 44557958 AGGGAGACCTACAGCCCATCAGAAACCAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368149 29 + 6628207 AGGGAGACCTACAGCCCATCAGAAACCAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350886 29 - 5917169 AGGGAGACCTACAGCCCATCAGAAACCAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303909 29 - 10531588 AGGGAGACCTACAGTCCATTAGAAACCAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733653 28 + 13852661 AGGGAGA-CTACAACCCATCATAAATAAT i otoGar3.GL873566 I 2 C 0 s mm10.chr8 22487901 19 - 129401213 AAGTAG----------CACCCAAACCCGA i mm10.chr8 C 0 C 0 s canFam3.chr5 80484165 29 + 88915250 AGACAGACCTAGAATCCATCAAAAATAAT i canFam3.chr5 I 4 C 0 s dasNov3.JH569970 944343 29 + 1009443 AGTGAGACCTTTAACCTATCAAAAATAAT i dasNov3.JH569970 C 0 I 7324 e micMur3.chr20 54953203 58 + 72247402 I e proCoq1.NW_012152729v1 2960274 32 + 9850184 I a score=231769.000000 s hg38.chr16_GL383557v1_alt 72803 17 + 89672 CACAGCTAGGCTTAAGG s panTro5.chr16 21504293 17 - 81586097 CACAGCTAGGCTTAAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565833 17 - 90481686 CACAGCTAGGCTTAAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798710 17 + 3010529 CACAGCTAAGCTTAAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917116 17 + 163208435 CACAGCTTGGCTCAAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384587 17 - 74971481 CACAGCTAGGCTTAAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097231 17 - 78541002 CACAGCTAGGCTTAAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490868 17 + 26466322 CACAGCTAGGCTTAAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817476 17 + 43916225 CACAGCTAGGCTTAAGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248029 17 + 75399963 CACAGCCAGGCTTAAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815241 17 - 7209941 CACAGCTAGGCTTAAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555663 17 + 3907144 CACAGCTAGGCTTAAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554008 17 - 44557958 CACAGCCATGCTTAAGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368178 17 + 6628207 CACAGCCATGCTTAAGT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350915 17 - 5917169 CACAGCCATGCTTAAGT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303938 17 - 10531588 CACAGCCATGCTTAAGT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733681 17 + 13852661 CCCTGCCAGGCTCAAAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22487920 17 - 129401213 CACAGCCAGGCTTCAGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80484194 17 + 88915250 CACAGCCAGGCTTAAAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 951696 17 + 1009443 CACAGCCAGCCTTAAAT i dasNov3.JH569970 I 7324 C 0 e micMur3.chr20 54953203 58 + 72247402 I e proCoq1.NW_012152729v1 2960274 32 + 9850184 I a score=527306.000000 s hg38.chr16_GL383557v1_alt 72820 33 + 89672 TACATTAATGCTTCCTGTCTCTAAGTAAGCCAA s panTro5.chr16 21504310 33 - 81586097 TACATTAATGCTTCCTGTCTCTAAGTAAGCCAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565850 33 - 90481686 TACATTAATGCTTCCTGTCTCTAAGTAAGCCAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798727 32 + 3010529 TACATTAATGC-TCCTGTCTCTAAGTAAGCCAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917133 33 + 163208435 TACATTAATGCTTCCTGTCTCTAAGTAAGCCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384604 33 - 74971481 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097248 33 - 78541002 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490885 33 + 26466322 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817493 33 + 43916225 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248046 33 + 75399963 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815258 33 - 7209941 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555680 33 + 3907144 TACATTAATGCTCCCTGTCTCTAAGTAAGCCAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554025 32 - 44557958 TACTTTAATGCTTCCTGTCTC-AAGTAAGACAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368195 33 + 6628207 TACATTAAAGCTTCCTGTCTCTAAGTAAGCCAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350932 33 - 5917169 TACATTAAAGCTTCCTGTCTCTAAGTAAGCCAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303955 31 - 10531588 TACATTAATGCTTCCTATCTCTAAGTAAGCC-- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953261 33 + 72247402 TACATTAATGCTTCCTGTCCCTAAGCAAGCCAA i micMur3.chr20 I 58 C 0 s proCoq1.NW_012152729v1 2960306 33 + 9850184 TACATTAATGCTTCCTGTCCCTAAGCAAGCCAA i proCoq1.NW_012152729v1 I 32 I 228 s otoGar3.GL873566 13733698 32 + 13852661 AACGTTAATGCTTCC-GTCTCTAAGCAAGCCAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22487937 30 - 129401213 TCCATTAAC-CTTGGGATTTCCAAGCAGAGA-- i mm10.chr8 C 0 C 0 s canFam3.chr5 80484211 33 + 88915250 GACATTAATGCTTCCCGTACCTAAGAAAGCCAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 951713 33 + 1009443 AATATTAATGCTTCCTGTCTCTAAATAAGCCAA i dasNov3.JH569970 C 0 C 0 a score=77169.000000 s hg38.chr16_GL383557v1_alt 72853 5 + 89672 CTGAC s panTro5.chr16 21504343 5 - 81586097 CTGAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565883 5 - 90481686 CTGAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798759 5 + 3010529 CTGAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917166 5 + 163208435 CTGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384637 5 - 74971481 CTGAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097281 5 - 78541002 CTGAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490918 5 + 26466322 CTGAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817526 5 + 43916225 CTGAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248079 5 + 75399963 CTGAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815291 5 - 7209941 CTGAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555713 5 + 3907144 CTGAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554057 5 - 44557958 CTGAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368228 5 + 6628207 CTGAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350965 5 - 5917169 CTGAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303986 3 - 10531588 --GAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953294 5 + 72247402 ATGAC i micMur3.chr20 C 0 I 217 s otoGar3.GL873566 13733730 5 + 13852661 ATGAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22487967 5 - 129401213 CCCAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80484244 5 + 88915250 CTGAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 951746 5 + 1009443 CTGAC i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2960339 228 + 9850184 I a score=1896558.000000 s hg38.chr16_GL383557v1_alt 72858 170 + 89672 TC--GGCACAGAACACTGGTTTCTCTCCAGTAATCTATACATCCCC--CT-TTCATCTCTTTACTAAATATTCACTTCTCTATCAAGGAA-ATAACTAAGTCGCACGTGAAACCACTA----AACAGAAAAGCTTTAATTTTATTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT s panTro5.chr16 21504348 170 - 81586097 TC--GGCACAGAACACTGGTTTCTCTCCAGTAATCTATACATCCCC--CT-TTCATCTCTTTACTAAATATTCACTTCTCTATCAAGGAA-ATAACTAAGTCGCACGTGAAACCACTA----AACAGAAAAGCTTTAATTTTATTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21565888 170 - 90481686 TC--GGCACAGAACACTGGTTTCTCTCCAGTAATCTATACATCCCC--CT-TTCATCTCTTTACTAAATATTCACTTCTCTATCAAGGAA-ATAACTAAGTCGCACGTGAAACCACTA----AACAGAAAAGCTTTAATTTTATTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798764 170 + 3010529 TC--GGCACAGAACACTGGTTTCTCTCCAGTAATCTATACATCCCC--CT-TTCATCTCTTTAGTAAATATTCACTTCTCTATCAAGGAA-ATAACTAAGTCGCACGCGAAACCACTA----AACAGAAAAGCTTTAATTTTATTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917171 172 + 163208435 TCAGGGTACAGAACACTGGTTTCTCTCCAGTAACCTATACATCCCC--CT-TTTATCTCTTTAGTAAATATTCACTTCTCTATCAAGGAA-ATAACTAAGTCACACGTGAAACCACTA----AACAGAAAAGCTTTAATTTTATTGC--C---TGTAGGGCATTACCTTATCCCTCT--------------AAGAACAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384642 172 - 74971481 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCATCTCTTCAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097286 172 - 78541002 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCATCTCTTCAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14490923 172 + 26466322 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCATCTCTTTAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817531 172 + 43916225 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCATCTCTTTAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248084 172 + 75399963 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCACCTCTTTAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACCGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815296 172 - 7209941 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCATCTCTTTAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AAGAACAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555718 172 + 3907144 TCAGGGCACAGAACACTGGTTTCTCTCCAGAAACCTATACATCCCC--CT-TTCATCTCTTTAGTACATATTCACTTCCCTATCAAGGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTACCCTATCCCTCT--------------AACAACAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554062 164 - 44557958 TCAGGACACAGAACACTGGTTTCTCT-CAGTAACCTATACATCCCA--TT-TCCTTCTCTTTAGTAAATACTCACTTCCCTATCAAAGAA-ATAACTAAGTCACACATGAAACCACTA----AACAGAAAAGCCTTAACTTTA------------GAGGGCATTCCACCACCCCTCT--------------AAGAACAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368233 167 + 6628207 TCAGGACACAGAACACTGGTTTCTCTCCAGTAACCTATACATCCCT--CT-TCCATCTCTTTACTAAATATTCACTTTCCTATCAAAGAA-ATAACTATGTCAC-----AAATCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TTTAGGGCATTCCCCCACCCCTCT--------------AAGAACAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3350970 172 - 5917169 TCAGGACACAGAACACTGGTTTCTCTCCAATAATCTATACATCCCC--CT-TCCGTCTCTTTAGTAAATATTCACTTCCCTATCAAAGAA-ATAACTAAGTCACATATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTCCCCCACCCCTCT--------------AAGAACAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9303989 172 - 10531588 TCAGGACACAGAACACTTGTTTCTCTCCAGTAACCTATACATCCCC--CT-TCCTTCTCTTTAGTAAATATTCACTTCTCTATCAAAGAA-ATAACTAAGTCACATATGAAACCACTA----AACAGAAAAGCCTTAACTTTACTGC--C---TGTAGGGCATTCCCCCACCCCTCT--------------AAGAACAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733735 145 + 13852661 CCAGGGCATGGAATACCAGCAT-------------------GCTCC--TT-TTCATCTCTTTAGTAAATCCTCAATTCTCTATCATGGAA-ATGACCAAGTCACATATGAAACCACTA----CGCAGAAAAGCCTAAGCTTTACTGC--C---TCTAGGGCATTCCCTTACCCCTCC---------------------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22487972 159 - 129401213 --AAGGGCCTGAACCCTGGCATGTTTCCCAGAGCCTGTCTAGCCTT--CTCTCCATCCAGATGGTAACGCGTCAGTTCTCTACCTGGGCA-----------------------TGCTATGGGAATAAAAGAACATT---TTTGCTA----------GGAACCTTTCTCTATTTCTTTTTTATGTACACAATAAATACAT i mm10.chr8 C 0 C 0 s canFam3.chr5 80484249 116 + 88915250 CAAGAACCTGGAACACTGACATGCCTATTGTAACCTATCCATCCCCCACT-TTCATCTCTTC-----------------------------------------------------------------AAAAGCCTAACCTTTAGTGTCAC---TTTCTGGCATTTCCCTACTCCTCC--------------AAAAATAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 951751 175 + 1009443 CAAGAGCCCAGAATACTGGCGT-TCCACTGTAACAAACATGTTCCC--TC-TTCAGCTCTTCAATAAATACTAAATTCTCTATCATGAAATATAACTCAGCCACACATGAAACCATTA----AGCAGGAAAATCTAAACTTTGCTAC--CTCTTTTCTGGCATTCCCCCACCCCTCC--------------AAAAACAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54953299 217 + 72247402 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I a score=171828.000000 s hg38.chr16_GL383557v1_alt 73028 26 + 89672 ACCTCAAAAT----------------TTCAAAATGGAAATAA s panTro5.chr16 21504518 26 - 81586097 ACCTCAAAAT----------------TTCAAAATGGAAATAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566058 26 - 90481686 ACCTCAAAAT----------------TTCAAAATGGAAATAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798934 26 + 3010529 ACCTCAAAAT----------------TTCAAAATGGAAATAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917343 24 + 163208435 ACCTC--AAT----------------TTCAAAATGGAAATAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384814 26 - 74971481 ATTTCAAAAC----------------TTCAAAATGGAAATAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097458 26 - 78541002 ATTTCAAAAC----------------TTCAAAATGGAAATAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491095 26 + 26466322 ATTTCAAAAC----------------TTCAAAATGGAAATAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817703 26 + 43916225 ATTTCAAAAC----------------TTCAAAATGGAAATAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248256 26 + 75399963 ATTTCAAAAC----------------TTCAAAATGGAAATAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815468 26 - 7209941 ATTTCAAAAC----------------TTCAAAATGGAAATAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555890 26 + 3907144 AGTTCAAAAT----------------TTCAAAATGGAAATAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554226 18 - 44557958 A------AA------------------TCAAAACGGAAATAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368400 18 + 6628207 A------AA------------------TCAAAATGGAAATAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351142 18 - 5917169 A------AA------------------TCAAAATGGAAATAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304161 18 - 10531588 A------AA------------------TCAAAATGGAAATAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733880 41 + 13852661 -CCTCCAAATTGATTATGCTAATCAATTCAAAATGGAAATAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22488131 30 - 129401213 agccctaaaa------------atcattcacactaacaaaaa i mm10.chr8 C 0 I 83 s canFam3.chr5 80484365 22 + 88915250 AATTGA--------------------TTCAAAATGGAAGTAA i canFam3.chr5 C 0 I 4 e micMur3.chr20 54953299 217 + 72247402 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C a score=37480.000000 s hg38.chr16_GL383557v1_alt 73054 3 + 89672 AGG s panTro5.chr16 21504544 3 - 81586097 AGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566084 3 - 90481686 AGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798960 3 + 3010529 AGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917367 3 + 163208435 AGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384840 3 - 74971481 AGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097484 3 - 78541002 AGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491121 3 + 26466322 AGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817729 3 + 43916225 AGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248282 3 + 75399963 AGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815494 3 - 7209941 AGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555916 3 + 3907144 AGG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554244 3 - 44557958 AGG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368418 3 + 6628207 Agg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351160 3 - 5917169 AGG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304179 3 - 10531588 AGG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733921 3 + 13852661 AAG i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488161 83 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C a score=491632.000000 s hg38.chr16_GL383557v1_alt 73057 56 + 89672 CTGGGTGTGggccgggcgcagtgtctcatgcctgtgatcccagcactttgggaggc s panTro5.chr16 21504547 56 - 81586097 CTGGGTGTGggccgggcgcagtgtctcatgcctgtgatcccagcactttgggaggc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566087 56 - 90481686 CTGGGTGTGggccgggcgcagtgtctcatgcctgtgatcccagcactttgggaggc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 798963 56 + 3010529 CTGGGTGTGggccgggcgcagtgtctcatgcctgtaatcccagcactttgggaggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917370 56 + 163208435 CTGGGTGTGggccgggcgcagtgtctcacgcctgtaatcccagcactttgggaggc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384843 56 - 74971481 CCGGGTGTGggctaggtgcagtgtctcaaacctgtaatcacagcactttgggaggc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097487 56 - 78541002 CCGGGTGTGggccaggtgcagtgtctcatacctgtaatcacagcactttgggaggc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491124 56 + 26466322 CTGGGTGTGggccaggtgcagtgtctcacacctgtaatcacagcactttgggaggc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817732 56 + 43916225 CTGGGTGTGggccaggtgcagtgtctcacacctgtaatcacagcactttgggaggc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248285 56 + 75399963 CTGGGTATGggccaggtgcagtgtctcacacctgtaatcacagcactttgggaggc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815497 42 - 7209941 CTGGGTGTGggccaggtgcagtg--------------tcacagcactttgggaggc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555919 56 + 3907144 CTGGGTGTGggccaggtgcagtgtctcacacctgtaattacagcactttgggaggc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554247 56 - 44557958 CTGGGTGCAggccgggtgcagtgtctcacacctgtaatcccagcactttgagaggc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368421 35 + 6628207 ct-----------gggtgcagtgtctca----------cccagcaatttgggaggc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351163 56 - 5917169 CTGGGTGCAggtcgggtgtagtgtctcacacctgcaatcccagcactttgggaggc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304182 56 - 10531588 CCGGGTGCGggccgggtgcagtgtctcacacctgtaatcccagcactttgggaggc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488161 83 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e otoGar3.GL873566 13733924 0 + 13852661 C a score=269599.000000 s hg38.chr16_GL383557v1_alt 73113 29 + 89672 tgagg-gggtggatcacctgaggtcaggag s panTro5.chr16 21504603 29 - 81586097 tgagg-gggtggatcacctgaggtcaggag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566143 29 - 90481686 tgagg-gggtggatcacctgaggtcaggag i panPan2.chr16 C 0 I 28 s gorGor5.CYUI01000018v1 799019 29 + 3010529 tgagg-gggtggatcacctaaggtcaggag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917426 29 + 163208435 tgagg-gggtggatcacctgaggtcaggag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384899 29 - 74971481 cgagg-ggacggatcacctgaggtcaggag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097543 29 - 78541002 cgagg-ggacggatcacctgaggtcaggag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491180 29 + 26466322 cgagg-ggacggatcacctgaggtcaggag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817788 29 + 43916225 cgagg-ggacggatcacctgaggtcaggag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248341 28 + 75399963 cgagg-ggatggatcacctgagg-caggag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815539 29 - 7209941 cgagg-ggacggatcacctgaggtcaggag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 555975 29 + 3907144 cgagg-ggatggatcacctgaggtcaggag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554303 30 - 44557958 caaggcaggtggattacctgaggtcaggag i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6368456 30 + 6628207 caaggcaggtggactacctgaggtcaggag i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3351219 30 - 5917169 caaggcaggtggattacctgaagtcaggag i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9304238 30 - 10531588 caaggcaggtggattacctgaggtcaggag i aotNan1.NW_018500622v1 C 0 I 1 s mm10.chr8 22488244 28 - 129401213 taatg-gagagcat-acatggggtcagagg i mm10.chr8 I 83 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e otoGar3.GL873566 13733924 0 + 13852661 C a score=446363.000000 s hg38.chr16_GL383557v1_alt 73142 66 + 89672 ttcaggacagcctggccaacgtggtgaaa------ccccatctctactaaaaa--tac-aaaaagtagccaggcc s panTro5.chr16 21504632 66 - 81586097 ttcaggacagcctggccaacgtggtgaaa------ccccatctctactaaaaa--tac-aaaaagtagccaggcc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799048 66 + 3010529 ttcaggacagcctggccaacatggtgaaa------ctccatctctactaaaaa--tac-aaaaagtagccaggcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917455 66 + 163208435 ttcaggacagcctggccaacgtggtgaaa------tcccatctctactaaaga--tac-aaaaattagccaggcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384928 66 - 74971481 ttcaggacagcctggccaacgtggtcaaa------ccccatctctactaaaaa--cac-aaaaattagctgggtc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097572 66 - 78541002 ttcaggacagcctggccaacgtggtcaaa------ccccatctctactaaaaa--cac-aaaaattagctgggtc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491209 66 + 26466322 ttcaggacagcctggccaacgtggtcaaa------ccccatctctactaaaaa--cac-aaaaattagctgggcc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817817 67 + 43916225 ttcaggacagcctggccaacgtggtcaaa------ccccatctctactaaaaa--tacaaaaaattagctggcct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248369 66 + 75399963 ttcaggacagcctgaccaacgtggtgaaa------ccccatctctactaaaaa--cac-aaaaattagccaggcc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815568 66 - 7209941 ttcaggacagcctggccaacgtggtcaaa------ccccatctctactaaaaa--cac-aaaaattagctgggcc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556004 66 + 3907144 ttcaggacagcctggccaacgtggtgaaa------ccccatctctactaaaaa--tac-aaaaattagccgggcc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554334 62 - 44557958 ttgaaaccagcctggccaatgtact---a------aactgtctctactaaaaa--tac-aaaaattagct-gaca i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6368487 65 + 6628207 ttgaaaccagcctagccaacgtact-aaa------aactgtctctactaaaaa--tacaaaaaattagct-gacg i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3351250 64 - 5917169 ttgaaaccagcctagccaacgtact-aaa------aactgtctctactaaaaa--tac-aaaaattagct-gacg i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9304269 64 - 10531588 ttgaaaccagcctggccaacgtact-aaa------aattgtctctactaaaaa--tac-aaaaattagct-gacg i aotNan1.NW_018500622v1 I 1 C 0 s mm10.chr8 22488272 74 - 129401213 tcttagagggaatggaaagaggaaagaaatgtaattctcttctgttctaaaaatgtat-aaaaattaaaCAAATT i mm10.chr8 C 0 I 391 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=424206.000000 s hg38.chr16_GL383557v1_alt 73208 48 + 89672 tggt-ggt-gggcacctgtaatcccagctactcg----ggaggctgaggcagga s panTro5.chr16 21504698 48 - 81586097 tggt-ggt-gggcacctgtaatcccagctactcg----ggaggctgaggcagga i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799114 48 + 3010529 tggt-ggt-gggcacctgtaatcccagctactcg----ggaggctgaggcagga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917521 48 + 163208435 tggt-ggt-gggcacctgtaatcccagctactcg----ggaggctgaggcagga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21384994 48 - 74971481 tggt-ggt-gggcacccgtaatcccagctactcg----ggaggctgaggcagga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097638 48 - 78541002 tggt-ggt-gggcacccgtaatcccagctactcg----ggaggctgaggcagga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491275 48 + 26466322 tggt-ggt-gggcacccgtaatcccagctactcg----ggaggctgaggcagga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817884 53 + 43916225 gcgtcggtggggcacccgtaat-ccagctactcggggagggggctgaggcagga i cerAty1.NW_011999143v1 C 0 I 19 s chlSab2.chr5 58248435 48 + 75399963 tggt-ggt-gggcacctgtaatcccagctactcg----ggaggctgaggcagga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815634 48 - 7209941 tggt-ggt-gggcacccgtaatcccagctactcg----ggaggctgaggcagga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556070 48 + 3907144 tggt-gat-gggcacctgtaatcccagctactcg----ggaggctgaggcagga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554396 48 - 44557958 tggt-ggt-gggcacctgtaattccagctatcca----ggaggctgaggcagga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368552 48 + 6628207 tggt-ggt-gggcacctgtaattccagctattca----ggaggctgaggcagga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351314 48 - 5917169 tggt-ggt-ggacacctgtaattccagctattca----ggaggctgaggcagga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304333 48 - 10531588 tggt-ggt-gggcacctgtaattccagctattca----ggaggctgaggcagga i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=2552.000000 s hg38.chr16_GL383557v1_alt 73256 1 + 89672 g s panTro5.chr16 21504746 1 - 81586097 g i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799162 1 + 3010529 g i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917569 1 + 163208435 g i nomLeu3.chr2 C 0 C 0 s colAng1.NW_012123265v1 556118 1 + 3907144 g i colAng1.NW_012123265v1 C 0 I 168 s calJac3.chr20 21554444 1 - 44557958 g i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368600 1 + 6628207 g i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351362 1 - 5917169 g i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304381 1 - 10531588 a i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e macNem1.NW_012011355v1 14491323 0 + 26466322 C e rheMac8.chr20 21385042 0 - 74971481 C e macFas5.chr20 21097686 0 - 78541002 C e manLeu1.NW_012101698v1 6815682 0 - 7209941 C e chlSab2.chr5 58248483 0 + 75399963 C e cerAty1.NW_011999143v1 20817937 19 + 43916225 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=120547.000000 s hg38.chr16_GL383557v1_alt 73257 65 + 89672 aatggcttgaacccgagaggcagagattgcggtgagctgaggtggtgccattgcactccagcctg s panTro5.chr16 21504747 65 - 81586097 aatggcttgaacccgagaggcagagattgcagtgagctgaggtggtgccattgcactccagcctg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799163 65 + 3010529 aatggcttgaacccgagaggcagagattgcggtgagctgaggtggtgccattgcactccagcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917570 64 + 163208435 aatggcttgaaccagagaggcaaagattgcggtgagc-gaattcgtgccactgcactccagcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385042 13 - 74971481 ----------------------------------------------------gcactccggcctg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097686 13 - 78541002 ----------------------------------------------------gCACTCCGGCCTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491323 13 + 26466322 ----------------------------------------------------gCACTCCGGCCTG i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58248483 13 + 75399963 ----------------------------------------------------gcactccagcctg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815682 13 - 7209941 ----------------------------------------------------gcactccggcctg i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21554445 65 - 44557958 aattgcttgaacctgggaggggaaggttgcagtgagccaagattgcaccattgcactccagccta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368601 65 + 6628207 aattgcttgaacccaggaggggaaggtcacagtgagccaagattgtgccattgcactccagcctg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351363 65 - 5917169 aattgcttgaacctgggaggggaaggtcacagtgagctaatattgcgccattgcactccagcctt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304382 65 - 10531588 aattgcttgaacctgggaggggaaggtcgcagtgagccaagactgcgccattgcactccagcctg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e colAng1.NW_012123265v1 556119 168 + 3907144 I e cerAty1.NW_011999143v1 20817937 19 + 43916225 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=73660.000000 s hg38.chr16_GL383557v1_alt 73322 11 + 89672 ggtgacaagag s panTro5.chr16 21504812 11 - 81586097 ggtgacaagag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799228 11 + 3010529 ggtgacaagag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917634 11 + 163208435 ggggaaaagag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385055 11 - 74971481 cgtgacaagag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097699 11 - 78541002 CGTGACAAGAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491336 11 + 26466322 CGTGACAAGAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817956 10 + 43916225 ggtgacaag-g i cerAty1.NW_011999143v1 I 19 C 0 s chlSab2.chr5 58248496 11 + 75399963 cgtgacaagag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815695 11 - 7209941 cgtgacaagag i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21554510 11 - 44557958 ggtgacaagag i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368666 11 + 6628207 ggtgacaagag i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3351428 11 - 5917169 ggtgacaagag i cebCap1.NW_016107433v1 C 0 I 804 s aotNan1.NW_018500622v1 9304447 11 - 10531588 ggtgacaagag i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e colAng1.NW_012123265v1 556119 168 + 3907144 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=95188.000000 s hg38.chr16_GL383557v1_alt 73333 26 + 89672 tgaaactcggtc---------------aaaaaaaaaaaaaa s panTro5.chr16 21504823 25 - 81586097 tgaaactcggtc----------------aaaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799239 25 + 3010529 cgaaactcggtc----------------aaaaaaaaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917645 41 + 163208435 cgaaattcggtccaaaaaaaaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385066 31 - 74971481 cgaaagtcggtc----------aaaaaaaaaaaaaaaaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097710 27 - 78541002 CGAAAGTTGGTC--------------AAAAAAAAAAAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491347 27 + 26466322 CGAAAGTCGGTC--------------AAAAAAAAAAAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817966 31 + 43916225 tgaaacttggtc----------aaaaaaaaaaaaaaaaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248507 31 + 75399963 caaaactcagtc----------aaaaaaaaaaaaaaaaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815706 30 - 7209941 tgaaacttggtc----------aaaaaaaaaaaaaaaaaa- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21554521 25 - 44557958 caaaactctgta--------------taaaaaaaaaaaa-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6368677 26 + 6628207 caaaactgtctc--------------aaaaaaaaaaaaaa- i saiBol1.JH378225 C 0 I 623 s aotNan1.NW_018500622v1 9304458 26 - 10531588 caaaactctgtt--------------ttaaaaaaaaaaaa- i aotNan1.NW_018500622v1 C 0 I 2 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e cebCap1.NW_016107433v1 3351439 804 - 5917169 I e panPan2.chr16 21566172 28 - 90481686 I e colAng1.NW_012123265v1 556119 168 + 3907144 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=161643.000000 s hg38.chr16_GL383557v1_alt 73359 36 + 89672 g--gctgggtgcggtggctcacgcctgtaatgccagca s panTro5.chr16 21504848 36 - 81586097 g--gctgggcgcggtggctcacgcctgtaatgccagca i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799264 36 + 3010529 g--gctgggcgcggtggctcacgcctgtaatgccagca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917686 36 + 163208435 T--gctgggtgcggtggctcacgcctgtaatcccagca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385097 36 - 74971481 a--gccaggcgcagtggctcacgcctgtaatcccagca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097737 36 - 78541002 A--gccaggcgcagtggctcacgcctgtaatcccagca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491374 36 + 26466322 A--gccaggcgcagtggctcacgcctgtaatcccagca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20817997 36 + 43916225 a--gccaggcgcagtggctcacgcctgtaatcccagca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248538 38 + 75399963 aGgaccaggcgcagtggctcacgcctgtaatcccagca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815736 35 - 7209941 ---gccaggcgcagtggctcacgcctgtaatcccagca i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21554546 30 - 44557958 --Tgctgagcatggtggctcatgcctgtaatg------ i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9304486 36 - 10531588 --Tgctgagagtggtggctcatgcctgtaatgccagca i aotNan1.NW_018500622v1 I 2 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e cebCap1.NW_016107433v1 3351439 804 - 5917169 I e panPan2.chr16 21566172 28 - 90481686 I e colAng1.NW_012123265v1 556119 168 + 3907144 I e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=239761.000000 s hg38.chr16_GL383557v1_alt 73395 41 + 89672 cccagcactttgggaggctgaggcgggtgaatcacttgagg s panTro5.chr16 21504884 41 - 81586097 cccagcactttgggaggctgaggcgggtgaatcacttgagg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799300 41 + 3010529 cccagcactttgggaggctgaggagggtgaatcacttgagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917722 41 + 163208435 cccagcactttgggaggctgaggtgggtgaatcacttgagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385133 41 - 74971481 cccagcactttgggaggccgaggcaggtgagtcacctgagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097773 41 - 78541002 cccagcactttgggaggccgaggcaggtgagtcacctgagg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491410 41 + 26466322 cccagcactttgggaggccgaggcaggtgagtcacctgagg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818033 41 + 43916225 cccagcactttgggaggccgaggcaggtgagtcacctgagg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248576 41 + 75399963 cccagcactttgggaggccgaggcaggtgagtcacctgagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815771 41 - 7209941 cccagcactttgggagaccgaggcaggtgagtcacccaagg i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21554576 40 - 44557958 -ccagcactttgggaggccaaggtggctgaattacccaagg i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352243 41 - 5917169 cccagcactttgggaggctgagacaggcagagcacttgaag i cebCap1.NW_016107433v1 I 804 C 0 s aotNan1.NW_018500622v1 9304522 34 - 10531588 -------cgttgggaggccaaggtgggtgaattacccaagg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e colAng1.NW_012123265v1 556119 168 + 3907144 I e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=177911.000000 s hg38.chr16_GL383557v1_alt 73436 28 + 89672 tcaggagttcaggaccagcatggccaa-c s panTro5.chr16 21504925 28 - 81586097 tcaggagttcaggaccagcatggccca-t i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799341 28 + 3010529 tcaggagttcaggaccagcatggccaa-c i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917763 28 + 163208435 tcaggagttcaggaccagcatggccaa-c i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385174 28 - 74971481 tcaggagttcaggaccagtatggccaa-t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097814 28 - 78541002 tcaggagttcaggaccagtatggccaa-t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491451 28 + 26466322 tcaggagttcaggaccagtatggccaa-t i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818074 28 + 43916225 tcaggagttcaggaccagtatggccaa-t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248617 28 + 75399963 tcaggagttcaggaccagtatggccaa-t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815812 28 - 7209941 tcaggagttcgggaccagtatggccaa-t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556287 28 + 3907144 tcaggagttcaggaccattatggccaa-t i colAng1.NW_012123265v1 I 168 C 0 s calJac3.chr20 21554616 27 - 44557958 tcaggagtttgagaccagcctggccaa-- i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352284 27 - 5917169 ttaggagtttgagaccagtctgaccaa-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304556 28 - 10531588 tcaagactttgagaccagcctggccaac- i aotNan1.NW_018500622v1 C 0 I 15 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=91212.000000 s hg38.chr16_GL383557v1_alt 73464 16 + 89672 gggtggtgaaactcca s panTro5.chr16 21504953 16 - 81586097 gggtggtgaaactcca i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799369 16 + 3010529 gggtggtgaaactcca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917791 16 + 163208435 gggtggtgaaactcca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385202 16 - 74971481 gggtggtgaaacccca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097842 16 - 78541002 gggtggtgaaacccca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491479 16 + 26466322 gggtggtgaaacccca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818102 16 + 43916225 gggtggtgaaacccca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248645 16 + 75399963 gggtggtgaaacccca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815840 15 - 7209941 gagtggtgaaa-ccca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556315 16 + 3907144 gggtggtgaaacccca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554643 15 - 44557958 -gatggtaaaaccctg i calJac3.chr20 C 0 I 1 s cebCap1.NW_016107433v1 3352311 15 - 5917169 -catggtgaaacccag i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e aotNan1.NW_018500622v1 9304584 15 - 10531588 I e panPan2.chr16 21566172 28 - 90481686 I e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=372401.000000 s hg38.chr16_GL383557v1_alt 73480 64 + 89672 tctctactaaaaatacaaaaatcagccaggtgtggtggtgggtgcttgtaatcccaggtactcg s panTro5.chr16 21504969 64 - 81586097 tctctactaaaaatacaaaaatcagccaggcgcggtggtgggtgcttgtaatcccaggtactcg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799385 64 + 3010529 tctctactaaaaatacaaaaatcagccaggcgtggtggtgggcgcttgtaatcccaggtactcg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917807 64 + 163208435 tctctactaaaaatacaaaaatcagccaggcgtggtggtgagcgcttgtaatcccagctactca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385218 64 - 74971481 tctctactaaaaataggaaaatcagccaggtgtggtggtgggcgcttgtaatcccagctactca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097858 64 - 78541002 tctctactaaaaataggaaaatcagccaggtgtggtggtgggcgcttgtaatcccagctactca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491495 64 + 26466322 tctctactaaaaataggaaaatcagccaggtgtggtggtgggcgcttgtaatcccagctactca i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818118 64 + 43916225 tctctactaaaaataggaaaatcagccaggtgtggtggtgggcgcttgtaatcccagctactca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248661 64 + 75399963 tttctactaaaaataggaaaatcagccaggcgtggtggtgggcgcttgtaatcccagctactca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815855 64 - 7209941 tctctactaaaaataggaaaatcagccaggtgtggtggtgggcgcttgtaatcccagctactca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556331 64 + 3907144 tctctactaaaaataggaaaatcagccaggcatggtggtgggcacttgtaatcccagctactca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554659 33 - 44557958 tccccactaaaaatacaaaaattag-------------------------------actactcg i calJac3.chr20 I 1 C 0 s cebCap1.NW_016107433v1 3352326 64 - 5917169 tctctactaaaaatgcaaaagttagctgggggtgatggtgggcacctgtaatgccagctacttg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304599 33 - 10531588 tctccactaaaaatacaacaattag-------------------------------actactcg i aotNan1.NW_018500622v1 I 15 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e panPan2.chr16 21566172 28 - 90481686 I e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=750066.000000 s hg38.chr16_GL383557v1_alt 73544 117 + 89672 ggagactgaagcacaggaatcgcttgaacccaagaggcggaggttgcagtgggccaagactgt--gccattgcactacagcctgggtgacaagagcaaaact-ccgtctc---------------------aaaaaaaaaa s panTro5.chr16 21505033 117 - 81586097 ggagactgaagcacaggaatcgcttgaacccaagaggcagaggttgcagtgggccaagactgt--gccattgcactacagcctgggtcacaagagcaaaact-ccgtctc---------------------aaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566200 117 - 90481686 ggagactgaagcacaggaatcgc-tgaacccaagaggcagaggttgcagtgggccaagactgt--gccattgcactacagcctgggtcacaagagcaaaactaccgtact---------------------acaaaaaaaa i panPan2.chr16 I 28 C 0 s gorGor5.CYUI01000018v1 799449 117 + 3010529 ggagactgaagcacaggaatcgcttgaacccaagaggcggaggttgcagtgggccaagactgt--gccactgcactacagcctgggtgacaagagcaaaact-ccgtctc---------------------aaaaaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917871 117 + 163208435 ggagactgaagcacaggaatcgcttgaacccaagaggcggaggttgcagtgggccaagactat--gccactgcactacagcctgggtgacaagagcaaaact-ccatctc---------------------aaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385282 102 - 74971481 ggagacggaagcagaagaatctcttgaatccaggaggcagaggttgtagtgagccaagaccgc--a---------------ctgggcgacaagagcagaact-ccgtctc---------------------aaaaaaataa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21097922 102 - 78541002 ggagacggaagcagaagaatctcttgaatccaggaggcagaggttgtagtgagccaagaccgc--a---------------ctgggcgacaagagcagaact-ccgtctc---------------------aaaaaaataa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491559 102 + 26466322 ggagacggaagcagaagaatctcttgaatccaggaggcagaggttgtagtgagccaagaccgc--a---------------ctgggcgacaagagcagaact-ccgtctc---------------------aaaaaaataa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818182 102 + 43916225 ggagatggaagcagaagaatctcttgaacccaggaggcagaggttgtagtgagccaagaccgc--a---------------ctgggcgacaagagcagaact-ccgtctc---------------------aaataaataa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248725 138 + 75399963 ggagacggaagcagaagaatctcttgaacccaggaggcagaggctgcagtgagccaagaccgc--gccattgcactccagcctgggcgacaagagcagaact-ccgtctcaaaataaataaataaataaataaataaataa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6815919 114 - 7209941 ggagacggaagcagaagaatctcttgaacccaggaggcagaggttgtagtgagccaagaccgc--a---------------ctgggcgacaagagcagaact-ccgtctc---------aaataaataaagaaataaataa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556395 113 + 3907144 gcagacggaagcagaagaatctcttgaacccaggaggcagaggttgcagtgagccaagaccgc--gccattgcacggt---ctgggtgacaagagcaggact-ccatctc----------------------aaaaaataa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554692 118 - 44557958 ggaggatgaagca-caggattgcttgagcccaggaggtggaggttacagtgagccaagaccgcgagccattgcactccagcctgggcaacaagagcaaaact-ctgcctc---------------------aaaaaaaaaa i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352390 117 - 5917169 ggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcggtgagccgagatcgc--accactgcactccagcctgggtaacaagagcgaaact-ctgcctc---------------------aaaaaaaacc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304632 118 - 10531588 ggaggctgaagca-cagaattccttgagcccaggaggtggaggttgcagtgagccaagaccatgagccattgcactccagcctgggcgacaagagcaaaact-ctgcctc---------------------aaaaaaaaaa i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e dasNov3.JH569970 951926 0 + 1009443 C e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=30866.000000 s hg38.chr16_GL383557v1_alt 73661 25 + 89672 aaaa-----------aaaga---aagaaagaaaTAAAAC s panTro5.chr16 21505150 36 - 81586097 aaaaaaaaaaaaaagaaaGA---AAGAAAGAAATAAAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566317 34 - 90481686 aaaa--aaaaaaaaGAAAGA---AAGAAAGAAATAAAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799566 28 + 3010529 aaaa--------aaaaaaaa---aacaaaCAAATAAAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53917988 13 + 163208435 aagg--------------------------aaataaaaC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385384 19 - 74971481 ataa--------------------ataaataaataaaaC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098024 19 - 78541002 ataa--------------------ataaataaataaaaC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491661 19 + 26466322 ataa--------------------ataaataaataaaaC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818284 19 + 43916225 ataa--------------------ataaataaataaaAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248863 19 + 75399963 ataa--------------------ataaataaataaaAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816033 19 - 7209941 ataa--------------------ataaataaataaaAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556508 10 + 3907144 a-----------------------------aaaaaaaaC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554810 26 - 44557958 aaaa----------aaaaaa---aaaaaggaaaTAAAAC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352507 13 - 5917169 caaa--------------------------aaacaaaaC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304750 15 - 10531588 aaaa------------------------ggaaataaaaC i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 951926 25 + 1009443 --------------AAAAGATTCAAAATGAAAATAAAAG i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e saiBol1.JH378225 6368703 623 + 6628207 I e otoGar3.GL873566 13733924 0 + 13852661 C a score=-16881.000000 s hg38.chr16_GL383557v1_alt 73686 3 + 89672 ACT s panTro5.chr16 21505186 3 - 81586097 ACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566351 3 - 90481686 ACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799594 3 + 3010529 ACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918001 3 + 163208435 ACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385403 1 - 74971481 A-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098043 1 - 78541002 A-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491680 1 + 26466322 A-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818303 1 + 43916225 A-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248882 1 + 75399963 A-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816052 1 - 7209941 A-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556518 1 + 3907144 A-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554836 3 - 44557958 ATC i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352520 3 - 5917169 ATC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304765 3 - 10531588 ATC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733924 3 + 13852661 ACT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 951951 3 + 1009443 ACC i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80484387 4 + 88915250 I e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e saiBol1.JH378225 6368703 623 + 6628207 I a score=7910.000000 s hg38.chr16_GL383557v1_alt 73689 1 + 89672 G s panTro5.chr16 21505189 1 - 81586097 G i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566354 1 - 90481686 G i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799597 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918004 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385404 1 - 74971481 G i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098044 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491681 1 + 26466322 G i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818304 1 + 43916225 G i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248883 1 + 75399963 G i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816053 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556519 1 + 3907144 G i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554839 1 - 44557958 A i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352523 1 - 5917169 A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304768 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733927 1 + 13852661 G i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80484391 1 + 88915250 G i canFam3.chr5 I 4 C 0 s dasNov3.JH569970 951954 1 + 1009443 A i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54953299 217 + 72247402 I e mm10.chr8 22488346 391 - 129401213 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e saiBol1.JH378225 6368703 623 + 6628207 I a score=159954.000000 s hg38.chr16_GL383557v1_alt 73690 22 + 89672 TTTCATAACAGCCTTCTCCAAA s panTro5.chr16 21505190 22 - 81586097 TTTCATAACAGCCCTCTCCAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566355 22 - 90481686 TTTCATAACAGCCCTCTCCAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799598 22 + 3010529 TTTCGTAACAGCCCTCTCCAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918005 22 + 163208435 TTTCATAACAGCCCTCTCCAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385405 22 - 74971481 TTTTGTAACAGCTCTCTCCAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098045 22 - 78541002 CTTTGTAACAGCTCTCTCCAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491682 22 + 26466322 CTTTGTAACAGCCCTCTCCAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818305 22 + 43916225 CTTTGTAAGAGCCCTCTCCAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248884 22 + 75399963 TTTTGTGACAGCCCTCTCCAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816054 22 - 7209941 CTTTGTAACAGCCCTCTCCAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556520 22 + 3907144 TTTTGTAACAGCCCTCTCCAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554840 16 - 44557958 GTTTGTAATAGCCCTC------ i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3352524 22 - 5917169 TTTTGTAATAGCCCTCTCCAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304769 16 - 10531588 TTTTGTAATAGCCCTC------ i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13733928 14 + 13852661 TTTTGCAACAGCTG-------- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22488737 14 - 129401213 tTCTGTAACAGCTA-------- i mm10.chr8 I 391 C 0 s canFam3.chr5 80484392 14 + 88915250 TTTTATAACAGCTG-------- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 951955 14 + 1009443 CTTAACAGCAGCTT-------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54953299 217 + 72247402 I e proCoq1.NW_012152729v1 2960339 228 + 9850184 I e saiBol1.JH378225 6368703 623 + 6628207 I a score=14539.000000 s hg38.chr16_GL383557v1_alt 73712 2 + 89672 TC s panTro5.chr16 21505212 2 - 81586097 TC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566377 2 - 90481686 TC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799620 2 + 3010529 TC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918027 2 + 163208435 TC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385427 2 - 74971481 TC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098067 2 - 78541002 TC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491704 2 + 26466322 TC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818327 2 + 43916225 TC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248906 2 + 75399963 TC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816076 2 - 7209941 TC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556542 2 + 3907144 TC i colAng1.NW_012123265v1 C 0 C 0 s cebCap1.NW_016107433v1 3352546 1 - 5917169 T- i cebCap1.NW_016107433v1 C 0 C 0 s micMur3.chr20 54953516 2 + 72247402 TC i micMur3.chr20 I 217 C 0 s proCoq1.NW_012152729v1 2960567 2 + 9850184 TC i proCoq1.NW_012152729v1 I 228 C 0 s otoGar3.GL873566 13733942 2 + 13852661 TC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22488751 2 - 129401213 TG i mm10.chr8 C 0 C 0 s canFam3.chr5 80484406 2 + 88915250 CC i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 951969 0 + 1009443 C e aotNan1.NW_018500622v1 9304785 0 - 10531588 C e saiBol1.JH378225 6368703 623 + 6628207 I e calJac3.chr20 21554856 0 - 44557958 C a score=839051.000000 s hg38.chr16_GL383557v1_alt 73714 52 + 89672 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC s panTro5.chr16 21505214 52 - 81586097 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566379 52 - 90481686 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799622 52 + 3010529 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918029 52 + 163208435 TCCAAATAGTTTTTAACTGAGCAAGGATTCATATCCAGTTGATTTCCACTTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385429 52 - 74971481 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098069 52 - 78541002 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491706 52 + 26466322 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818329 52 + 43916225 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248908 50 + 75399963 TCC--ATAGTTTTTAACTGAGAAAGGATTCACATCCAGTTGATTTCCACTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816078 52 - 7209941 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556544 52 + 3907144 TCCAAATAGTTTTTAACTGAGCAAGGATTCACATCCAGTTGATTTCCACTTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554856 52 - 44557958 TCCAAATAACTTTTAACTGAGCAAGGATTCACATTCAGTTGATTTTCACTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369326 51 + 6628207 TCCAAATAACTTTTAACTGAGCAATGATTCACATTCAGTT-ATTTTCACTTC i saiBol1.JH378225 I 623 C 0 s cebCap1.NW_016107433v1 3352547 44 - 5917169 -------AACTTTTAACTGAGGAAGGATTCACATTCAGTT-ATTTTCACTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304785 52 - 10531588 TCCAAATAACTTTTAACTGAGCAAGGATTCACATTCAGTTGATTTTCACTTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953518 52 + 72247402 TTCAAATAGCTTTTCACTGAGCAAGGATTCGCATCCAGTTCATTTCCACTTC i micMur3.chr20 C 0 I 57 s proCoq1.NW_012152729v1 2960569 52 + 9850184 TCCAAATAGCTTCCCACTGAGTGAGGATTCACATGCAGTTCATTTCCACTTc i proCoq1.NW_012152729v1 C 0 I 8 s otoGar3.GL873566 13733944 52 + 13852661 TCCAAATAGCTTTCCACTAAGTAAGGATTCACATCCGGTTCATTTCCACTTC i otoGar3.GL873566 C 0 I 7 s mm10.chr8 22488753 47 - 129401213 ACTGGCTAACTTTTCACT----AAGGATTCTT-CCCAATTCATTGCCACGTC i mm10.chr8 C 0 C 0 s canFam3.chr5 80484408 51 + 88915250 TCCAAATAGCTTTTTACTGAGCAAAGATTCATATCCAGTACATT-CCACTTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 951969 51 + 1009443 -CCAAATAGCTTCCAATTGATCAAGGATTTACATCTAGTACATTTCCACTTC i dasNov3.JH569970 C 0 C 0 a score=150882.000000 s hg38.chr16_GL383557v1_alt 73766 11 + 89672 --ACACAAAAATG s panTro5.chr16 21505266 11 - 81586097 --ACACAAAAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566431 11 - 90481686 --ACACAAAAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799674 11 + 3010529 --ACACAAAAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918081 11 + 163208435 --ACACAAAAATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385481 11 - 74971481 --ACACAAAAATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098121 11 - 78541002 --ACACAAAAATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491758 11 + 26466322 --ACACAAAAATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818381 11 + 43916225 --ACACAAAAATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248958 11 + 75399963 --ACACAAAAATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816130 11 - 7209941 --ACACAAAAATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556596 11 + 3907144 --ACACAAAAATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554908 11 - 44557958 --ATACAAAAATA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369377 11 + 6628207 --ATACAAAAATA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352591 11 - 5917169 --ATACAAAAATA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304837 11 - 10531588 --ATACAAAAATA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2960629 11 + 9850184 --acacacaaatc i proCoq1.NW_012152729v1 I 8 C 0 s otoGar3.GL873566 13734003 11 + 13852661 --AAAAATCAATC i otoGar3.GL873566 I 7 C 0 s mm10.chr8 22488800 11 - 129401213 --AAACAAAAATG i mm10.chr8 C 0 C 0 s canFam3.chr5 80484459 11 + 88915250 --ACATAAAAATC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952020 13 + 1009443 ACACTCAAAAACC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54953570 57 + 72247402 I a score=3839144.000000 s hg38.chr16_GL383557v1_alt 73777 208 + 89672 ACATATTTAGGAAGTTTCCTCTTATGTGACCAGATATTGGA---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTACAGATAATGTTCTCAGGACCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- s panTro5.chr16 21505277 208 - 81586097 ACATATTTAGGAAGTTTCCTCTTACGTGACCAGATATTGGA---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTACAGATAATGTTCTCAGGACCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566442 208 - 90481686 ACATATTTAGGAAGTTTCCTCTTACGTGACCAGATATTGGA---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTACAGATAATGTTCTCAGGACCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799685 208 + 3010529 ACATATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGGA---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTACAGATAATGTTCTCAGGACCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918092 208 + 163208435 ACATATTCAGGAAGTTTCCTCTTATGTGACCAGACACTGGG---CTATCACTTACCCTTTTGAGGCTTATGTTGTCGTGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTACAGATAATGTTCTCAGGACCCTGGCAATATCACGAATCAAGATGAATGTGCAA- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385492 208 - 74971481 ACATATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGGA---CTATCACTTACCCTTTTGAGGCTTATATTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAACGTACAA- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098132 208 - 78541002 ACATATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGGA---CTATCACTTACCCTTTTGAGGCTTATGTTATCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAACGTACAA- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491769 208 + 26466322 ACATATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGAA---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAACGTACAA- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818392 208 + 43916225 ACATATTTAGGAAATTTCCTCTTATATGACCAGACATTGGG---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAACGTACAA- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58248969 208 + 75399963 ACTTATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGGG---CTATCACATACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAACGTACAG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816141 208 - 7209941 ACATATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGGG---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAACGTACAA- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556607 208 + 3907144 ACGTATTTAGGAAGTTTCCTCTTATGTGACCAGACATTGGG---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGCCGATAGAGAAAAAACCGAGAAACTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAAGAATCAAGATGAATGTACAA- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21554919 208 - 44557958 ACACATTTAGGAAGTTTCCTCTTATGTGACCAGACACTGGG---CCATCACTTACCCTTTTGAGGCTTAAGTTGTCATGTTCATAATTCAGTCGATAGAGAAAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTGCAGATAATGTTCTCAGGGCCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369388 208 + 6628207 ACACATTTAGGAAGTTTCCTCTTAGGTGACCAGACACTGGG---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAGTCGATAGAGAAAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAACTGCAGATAATGTTCTCAGGACCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352602 208 - 5917169 ACACATTTAGGAAGTCTCCTCTTATGTGACCAGACACTGGG---CTATCACTTACCCTTTTGAGGTTTATGTTGTCATGTTCATAATTCAGTCGATAGAGAAAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTGCAGATAATGTTCTCAGGACCCTGGCAATATCAGGAATCAAGATGAATGTGCAA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9304848 208 - 10531588 ACACATTTAGGAAGTTTCCTCTTATGTGACCAGACACTGGG---CTATCACTTACCCTTTTGAGGCTTATGTTGTCATGTTCATAGTTCAGTCGATAGAGAAAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATACAGCTGCAGATAATGTTCTCAGGGTCCTGGCAGTATGAGGAATCAAGATGAATGTGCAA- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953627 208 + 72247402 ACACATTTAGGAAGTTTCTTCTTATGTGACCAGACGTTGGG---CCATTACTCACTCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAACCGACAGAGAAAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCGCATGGAGAGATAGAGCTGCAAATAATGTTCTCAGGACCCTGGCAAGATTAAGAATCATGATGAATGTTCAA- i micMur3.chr20 I 57 C 0 s proCoq1.NW_012152729v1 2960640 208 + 9850184 acacaTTTAGGAAGCTTTTTCTTATGTGACCAGACAGTGGG---CCATCACTCACCCTTTTGAGGCTTATGTTGTCATGTTCATAATTCAACCGACAGAGACAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCACATGGGGAGATGGAGCTGCAAATAATGTTCTCGGGACCCTGGCAAGATTAGGAATCAAGATGAATGTTCAA- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13734014 205 + 13852661 ACACATTTAGGAAG---TTTCTTATGTAAAAAGACATTGGG---CTATCACTTACTCTTTTGAGGCTTATGTTGTCTTGGTCATAATTCAACCGACAGAGAAAAAACCGAGAAGCTGTAGAATAGGCTATCCAACTTCCACATGGGGAAATACAGCTACAAATAATGTTCTCAGGACCCTGGTGATATTAGGAATCAAGATGAATGTTCAA- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22488811 210 - 129401213 ACACATACA-GAAGTTTCTTCTTGTCCAGGAACACACTGCGCCCCCCTCACTTACTCTTTGGAGGCTTATGTTATCGCGTTCATATTTCAATCGATAGAGAAAAAAGCGAGACGCTGTAGAATAGGCTATCCAGCTTCCACACGGGGAGACACAGCTGCAGATAATGTTCTCAGGGCCCTGGCAAACCGAGGGAGCAACTCGAGTGAGAAA- i mm10.chr8 C 0 I 337 s canFam3.chr5 80484470 204 + 88915250 ----ACTTATGAAATTTCTTATTGTTTAACCAGACATTGTG---TTATTACTTACCCTTTGGAGGCTTATGTTGTCATGTTCATAATTCAACCGATAAAGAAAAAAACGAGAAGTTGTAGAATAGGCTATCCAACTTCCACACGGGGAGATACAGCTGCAAATAATGTTTTCTGGACCCTGGCAATGTTTGGAATCAAGATGAATAACCAG- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952033 209 + 1009443 ACACACTCCTGAAGTTTCTTCTTGCATTGCCAGAGATCGGG---CTATCACTTACCTTTTGGAGGCTTATGTTGTCATTTTCATAATTCAACTGATAGAGAAAAAAACGAGAAGCTGTAGAATAAGCTATCCAACTTGCATATGGGGAGATACAGCTGCAAATAATGTTCTCAGGACCCTGGTAAAGTTAAGAATCATGATGAAAGTTCACA i dasNov3.JH569970 C 0 C 0 a score=1090134.000000 s hg38.chr16_GL383557v1_alt 73985 72 + 89672 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATACCCACAGA-- s panTro5.chr16 21505485 72 - 81586097 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACATGACACCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566650 72 - 90481686 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACATGACACCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799893 72 + 3010529 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918300 72 + 163208435 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385700 72 - 74971481 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098340 72 - 78541002 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14491977 72 + 26466322 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818600 72 + 43916225 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249177 72 + 75399963 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACACCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816349 72 - 7209941 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACGCCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556815 72 + 3907144 TTAA-ACTTCACATAA---CGAGGTGCACTGGGACATGACACCTCAAGCTCTTGCCACTCTGGACATATCCACAGA-- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555127 70 - 44557958 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACACAACACCTCAAGCTCTTGCCACTCTGGACACGTC--CAGA-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369596 72 + 6628207 TTAA-ACTTCACATAA---TAAGGTGCACTGGGACACAACACCTCAAGCTCTTGCCACTCTGGACATGTCCACAGA-- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352810 72 - 5917169 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACACAACACCTCAAGCTCTTGCCACTCTGGACATGTCCACAGA-- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305056 72 - 10531588 TTAA-ACTTCACATAA---CAAGGTGCACTGGGACACAACACCTCAAGCTCTTGCCACTCTGGACATGTCCACAGA-- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953835 73 + 72247402 GTAAGACTTCATATGA---CGAGGCTCACTATGACATGACTCCTCAAGCTCTTACCACTCTGGACATATCCACAAA-- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2960848 73 + 9850184 GTAAAACTGTGTAGGA---CGAGGCTCACTGTGACACGACTCCTCAAGCTCTTATCACTCTGGACATATCCACAAA-- i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13734219 65 + 13852661 GTAAAACTTCATATGA---TGAAGCTCACTGTGA--------CTCAAGCTCTTACCACTCTGAACATACCCACAAG-- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80484674 71 + 88915250 AAAA-ACTTCACATGA---TAAGGTTC-CTGTGACATGAATCCTCAAGCTATTGCTACTCCGGATATACGCACAAA-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952242 75 + 1009443 --AA-AAACCACATACTGTCAAGGTTCACTGTGACATGAATTCTCAAGCTCACACCACTCTGGACTTGTCCACAAAAA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22489021 337 - 129401213 I a score=110868.000000 s hg38.chr16_GL383557v1_alt 74057 8 + 89672 T-ATCTACA s panTro5.chr16 21505557 8 - 81586097 T-ATCTACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566722 8 - 90481686 T-ATCTACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799965 8 + 3010529 T-ATCTACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918372 8 + 163208435 T-ATCTACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385772 8 - 74971481 T-ATCTATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098412 8 - 78541002 T-ATCTATA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492049 8 + 26466322 T-ATCTATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818672 8 + 43916225 T-ATCTATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249249 8 + 75399963 T-ATCTATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816421 8 - 7209941 T-ATCTATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556887 8 + 3907144 T-ATCTATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555197 8 - 44557958 T-ACCCACA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369668 8 + 6628207 T-ACCTACA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352882 9 - 5917169 TAACCTACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305128 8 - 10531588 T-ACCTACA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953908 8 + 72247402 T-ACCTGCA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2960921 8 + 9850184 T-ACCTACA i proCoq1.NW_012152729v1 C 0 I 96 s otoGar3.GL873566 13734284 8 + 13852661 T-ACCTACA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22489358 8 - 129401213 T-GTATGTA i mm10.chr8 I 337 C 0 s canFam3.chr5 80484745 8 + 88915250 C-ACCTACA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952317 8 + 1009443 C-ACCGACA i dasNov3.JH569970 C 0 C 0 a score=1042862.000000 s hg38.chr16_GL383557v1_alt 74065 89 + 89672 CATAATCTCGATC-CTCGTGTGGTCTGCATTAATATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGCATGG------------------------CTTTG---------ATTTCCAAATCCAA s panTro5.chr16 21505565 89 - 81586097 CATAATCTCGATC-CTCGTGTGGTCTGCATTAATATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGCATGG------------------------CTTTG---------ATTTCCAAATCCAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566730 89 - 90481686 CATAATCTCGATC-CTCGTGTGGTCTGCATTAATATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGCATGG------------------------CTTTG---------ATTTCCAAATCCAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 799973 89 + 3010529 CATAATCTCGATC-CTCGTGTGGTCTGCATTAATATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGCATGG------------------------CTTTG---------ATTTCCAAATCCAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918380 89 + 163208435 CATAATCTTGATC-CACGTGTGGTCTGCGTTAATATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGCATGG------------------------CTTTG---------ATTTCCAAATCCAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385780 89 - 74971481 CATAATCTCGATC-CTCGTGTGGTCTGCGTTACTACGATG--------------------------------------------------ATCTCAGAGGCAGAGTACCTAAAA------------------GGCGTGG------------------------CTTTG---------ATTTCCAAATCCAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098420 89 - 78541002 CATAATCTCGATC-CTCGTGTGGTCTGCGTTACTATGATG--------------------------------------------------ATTTCAGAGGCAGAGTACCTAAAA------------------GGCGTGG------------------------CTTTG---------ATTTCCAAATCCAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492057 89 + 26466322 CATAATCTCGATC-CTCGTGTGGTCTGCGTTACTATGATG--------------------------------------------------ATCTCAGAGGCAGAGTACCTAAAA------------------GGCGTGG------------------------CTTTG---------ATTTCCAAATCCAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818680 89 + 43916225 CATAATCTCGATC-CTCGTGTGGTCTGCGTTACTATGATG--------------------------------------------------ATCTCAGAGGCAGAGTACCTAAAA------------------GGCGTGG------------------------CTTTG---------ATTTCCAAATCCAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249257 89 + 75399963 CATAATCTTGATC-CTCGTGTGGTCTGCGTTACTATGATG--------------------------------------------------ATCTCAGAGGCAGAGTACCTAAAA------------------GGCATGG------------------------CTTTG---------ATTTCCAAATCTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816429 89 - 7209941 CATAATCTCAATC-CTCGTGTGGTCTGCGTTACTATGATG--------------------------------------------------ATCTCAGAGGCAGAGTACCTAAAA------------------GGCGTGG------------------------CTTTG---------ATTTCCAAATCCAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556895 89 + 3907144 CATAATCTCGATG-CTCGTGTGGTCTGCGTTACTATGATG--------------------------------------------------ATCTCAGAGGCAGAGTACCTAAAA------------------GGCGTGG------------------------CTTTG---------ATTTCCAAATCCAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555205 89 - 44557958 CATGATCTCGATC-CTCACGCGGTCTGTGTTACTATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGTATGG------------------------CTCTG---------ATTTCCAAATCCAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369676 89 + 6628207 CATGATCTCGATC-CTCATGTGATCTGTGTCACTCTGATT--------------------------------------------------ATTTCAGAGGCAGAGTACCTAAAA------------------GGTGTGG------------------------CTCTG---------ATTTCCAAATCCAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352891 89 - 5917169 CATGATCTTGATC-CTCATGTGGTCTGTGTTACTATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGTGTGG------------------------CTCTG---------ATTTCCAAATGCAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305136 89 - 10531588 CATGATCTCGATC-CTCATGTGGTCTGTGTTACTATGATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAA------------------GGTATGG------------------------CCCTG---------ATTTCCAAATCCAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54953916 84 + 72247402 CACAACCCCGACA-CTCA--CATTCTGTGTCGCTACAATT--------------------------------------------------ATTTCAGAGGCAGAGCACCTAAAT------------------GGTGTGG----------------------GGCTTTG--------------GAAATCCAA i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13734292 188 + 13852661 AAACCCCCCAACA-CTCA--TGGTGTGTGCCACAACAATTACACTACAACTGGTGTTTCTGTGTGCCATATGATGACAGCTCTGATGGTCATTCCAGAAAAAGAGTTCCAAAATCTCTCTGAAGGTGGACTAGGCATGGCCATCAGTGCATAGCTTCTTTCACCTTTGAAGGTGACCATAGTGAGATTCAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22489366 89 - 129401213 TGTAGTCTTGAACACTCATGTGCTGTGTGT-ACTATCATT--------------------------------------------------AAATCCCAGACAGAACACATCACT------------------GGTACAG------------------------CTTTG---------ATTTCCAAATCTAA i mm10.chr8 C 0 I 29 s canFam3.chr5 80484753 78 + 88915250 CATAATCCTGACA-CTGATATG----------CTATGATT--------------------------------------------------ATTTCAGAGGTACAGCACCTAAAT------------------GGTGTGG------------------------CT-TG---------ATTTCCAAAACCAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952325 76 + 1009443 CACAATCCTGACA-CTCA--TGCTATGTGTCACTATGATG--------------------------------------------------CCTTTACAGGCAGAGCATCTAAAC------------------------A------------------------AATTG--------------TAAAACCAG i dasNov3.JH569970 C 0 C 0 e proCoq1.NW_012152729v1 2960929 96 + 9850184 I a score=192738.000000 s hg38.chr16_GL383557v1_alt 74154 14 + 89672 GAATGGAGGTCTAT s panTro5.chr16 21505654 14 - 81586097 GAATGGAGGTCTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566819 14 - 90481686 GAATGGAGGTCTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800062 14 + 3010529 GAATGGAGGTCTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918469 14 + 163208435 GAATGGAGGTCTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385869 14 - 74971481 GAATGGAGGTCTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098509 14 - 78541002 GAATGGAGGTCTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492146 14 + 26466322 GAATGGAGGTCTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818769 14 + 43916225 GAATGGAGGTCTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249346 14 + 75399963 GAATGGAGGTCTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816518 14 - 7209941 GAATGGAGGTCTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556984 14 + 3907144 GAATGGAGGTCTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555294 14 - 44557958 GAATGAAGGTTTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369765 14 + 6628207 AAATGAAGGTCTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352980 14 - 5917169 GAATAAAGGTCTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305225 14 - 10531588 GAATGAAGGTCTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954000 13 + 72247402 GAATGAAGGTCTA- i micMur3.chr20 C 0 C 0 s otoGar3.GL873566 13734480 13 + 13852661 CAATG-AGGTACAT i otoGar3.GL873566 C 0 I 6 s canFam3.chr5 80484831 14 + 88915250 GAACAGAGGTCTAT i canFam3.chr5 C 0 I 11 s dasNov3.JH569970 952401 14 + 1009443 AAATGGAGGCATAT i dasNov3.JH569970 C 0 I 12 e mm10.chr8 22489455 29 - 129401213 I e proCoq1.NW_012152729v1 2960929 96 + 9850184 I a score=93012.000000 s hg38.chr16_GL383557v1_alt 74168 6 + 89672 TCTTAT s panTro5.chr16 21505668 6 - 81586097 TCTTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566833 6 - 90481686 TCTTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800076 6 + 3010529 TCTTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918483 6 + 163208435 TCTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385883 6 - 74971481 TCTTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098523 6 - 78541002 TCTTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492160 6 + 26466322 TCTTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818783 6 + 43916225 TCTTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249360 6 + 75399963 TCTTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816532 6 - 7209941 TCTTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 556998 6 + 3907144 TCTTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555308 6 - 44557958 TCTTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369779 6 + 6628207 TCTTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3352994 6 - 5917169 TCGTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305239 6 - 10531588 TCTTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954013 6 + 72247402 TCTTAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2961025 6 + 9850184 TCTTAT i proCoq1.NW_012152729v1 I 96 C 0 s otoGar3.GL873566 13734499 6 + 13852661 Tttttt i otoGar3.GL873566 I 6 C 0 s canFam3.chr5 80484856 6 + 88915250 ACTGAT i canFam3.chr5 I 11 I 1 s dasNov3.JH569970 952427 6 + 1009443 TATTAT i dasNov3.JH569970 I 12 C 0 e mm10.chr8 22489455 29 - 129401213 I a score=52963.000000 s hg38.chr16_GL383557v1_alt 74174 5 + 89672 TTTGG s panTro5.chr16 21505674 5 - 81586097 TTTGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566839 5 - 90481686 TTTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800082 5 + 3010529 TTTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918489 5 + 163208435 TTTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385889 5 - 74971481 TTTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098529 5 - 78541002 TTTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492166 5 + 26466322 TTTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818789 5 + 43916225 TTTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249366 5 + 75399963 TTTGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816538 5 - 7209941 TTTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557004 5 + 3907144 TTCGG i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6369785 5 + 6628207 CTTTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353000 5 - 5917169 CTTTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305245 5 - 10531588 CTTTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954019 5 + 72247402 CTTGG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2961031 5 + 9850184 CTTGG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13734505 5 + 13852661 tttgg i otoGar3.GL873566 C 0 I 606 s mm10.chr8 22489484 5 - 129401213 TTAGG i mm10.chr8 I 29 C 0 s canFam3.chr5 80484863 4 + 88915250 TCTG- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 952433 5 + 1009443 CTCAG i dasNov3.JH569970 C 0 C 0 e calJac3.chr20 21555314 0 - 44557958 C a score=1154229.000000 s hg38.chr16_GL383557v1_alt 74179 83 + 89672 CCCTTTGAATACTTCATAGATAGCCTCATACTAGACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT s panTro5.chr16 21505679 83 - 81586097 CCCTTTGAATACTTCATAGATAGCCTCATACTAGACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566844 83 - 90481686 CCCTTTGAATACTTCATAGATAGCCTCATACTAGACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800087 83 + 3010529 CCTTTTGAATACTTCATAGATAGCCTCATACTAGACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918494 83 + 163208435 CCCTTTGAATACTTCATAGATAGCCTCATACTAGACCCCAACTTCAGAAACCTGAGCAGGGAGGCATCTACTGAAGGAAAGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385894 83 - 74971481 CCTTTTGAATACTTCATAGATAGCCTCATACTATACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098534 83 - 78541002 CCTTTTGAATACTTCATAGATAGCCTCATACTATACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492171 83 + 26466322 CCTTTTGAATACTTCATAGATAGCCTCATACTATACCCCAACTTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818794 78 + 43916225 CCTTTTGAATACTTCATAGATAGCCTCATACTATACCCCAAATTCAGAAACCTGAGCAGGGAGGCATTTACTG-----AAGCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249371 83 + 75399963 CCTTTTGAATATTTCATAAATAGCCTCATACTATACCCCAGCTTCAGAAACCTGAGCAGAGAGGCATTTACTGAAGGAAAGCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816543 83 - 7209941 CCTTTTGAATACTTCATAGATAGCCTCATACTATACCCCAAATTCAGAAACCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557009 83 + 3907144 CCTTTTGAATACTTCATAGATAGCCTCATACTATACCCCAACTTCAAAAATCTGAGCAGGGAGGCATTTACTGAAGGAAAGCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555314 81 - 44557958 --CTTTGAATACTTCACAAATGGCCTCATACTAAACCCCAACTTCAGAAACCTGAGCAGGGAGGAATTTACTGAAGGGAAGCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369790 83 + 6628207 CCCTTTGAATACTTCACAGATGGCCTCATACTAAACCCCAACTTCAGAAACCTAAGCAGGAAGGAATTCACTGAACGAAAGCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353005 83 - 5917169 CCCTTTGAATACTTCACAGATGGCCTCATACTAAACCCCAACTTTAGAAACCTGAGCAGGGAGGAATTTACTGAAGGAAAGCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305250 74 - 10531588 CCCTTTGAATACTTCACAGAT---------CTAAACCCCAACTTCAGAAACCTGAGCAGGGAGGAATTTACTGAAGGAAAGCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954024 83 + 72247402 CCCTTTTGGTACTTTATAGATAGTCTCATACCAAACTTCAACTTTAGAAACATGAGCTGAGAGGCATTTAATGCAGGAAGGCT i micMur3.chr20 C 0 I 564 s proCoq1.NW_012152729v1 2961036 83 + 9850184 CCCTTTTGGTACTTTGTAGATAGCCTCATACCAAACTGCAACTTTAGAAACCTGAGCAGGGAGGCATTTAATGCAGGAAAGCT i proCoq1.NW_012152729v1 C 0 I 1028 s mm10.chr8 22489489 57 - 129401213 TCTTTTGAGTACCTTGGAAA--------------GTCTTAATCTGGGAAAC----------AGGACATTAATGCA--ACAGCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80484867 83 + 88915250 CCCATCATGTACTTTAAAGATAGCTTCATACTAAACTCTAACTTTAGAAACCGGAGAAGAAAGGCATTTGATGCAGTAAAGCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952438 79 + 1009443 CCCTCTGAGTACTTCACAGTTG---CCACACTAAACCTCAATCTCAGGAATCTGAGCAGGGAGGCATTTAATGCA-GAAAGCT i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13734510 606 + 13852661 I a score=558719.000000 s hg38.chr16_GL383557v1_alt 74262 51 + 89672 CTGGAGGATAGGTGGTTTGAAGTACTTATTTTCT--GTTTTGTGTACGGCGTT s panTro5.chr16 21505762 51 - 81586097 CTGGAGGATAGGTGGTTTGAAGTACTTATTTTCT--GTTTTGTGTACGGCGTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566927 51 - 90481686 CTGGAGGATAGGTGGTTTGAAGTACTTATTTTCT--GTTTTGTGTATGGCGTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800170 51 + 3010529 TGGGAGGATAGGTGGTTTGAAGTACTTATTTTCT--GTTTTGTCTACGACGTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918577 51 + 163208435 TGGGAGGATATTTAGTTTGAAGTACTTATTTCCT--GTTTTGTCTATGACATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21385977 51 - 74971481 CAGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTACAACGTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098617 51 - 78541002 CAGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTACAACGTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492254 51 + 26466322 CAGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTACAACGTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818872 51 + 43916225 CAGGAGGATGGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTACAATGTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249454 51 + 75399963 CAGGAGGATAGGTGGTTTGGAGTACTTAGTTTCT--GTTTTGTCTACAACGTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816626 51 - 7209941 CAGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTACAACGTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557092 51 + 3907144 CAGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTACAACGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555395 51 - 44557958 TGGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTATCTATGACATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369873 51 + 6628207 TGGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTATGACATT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353088 51 - 5917169 TGGGAGGATAGGTGGTTTGGAGTACTTATTTTCT--GTTTTGTCTATGACATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305324 51 - 10531588 TGGGAGGATAGGTAGTTTGCAGTACTTATTTTCT--GTTTTGTCTATGACATT i aotNan1.NW_018500622v1 C 0 I 331 s mm10.chr8 22489546 40 - 129401213 ---GAGGACAAAGGATT--GAGTGCTCATTTCCT--CTTCTGTCTGT------ i mm10.chr8 C 0 C 0 s canFam3.chr5 80484950 52 + 88915250 TTGGAGGCCAGGTGGCTTAGAAAACTGATTTTCTGGGTTTTGTTTATGATAC- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952517 47 + 1009443 TTGGAGGACAGGTGATTTGGAGGACTGATTTTCT--ATTCCATG-ACAAC--- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54954107 564 + 72247402 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=105908.000000 s hg38.chr16_GL383557v1_alt 74313 8 + 89672 CTGCTTTA s panTro5.chr16 21505813 8 - 81586097 CTGCTTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566978 8 - 90481686 CTGCTTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800221 8 + 3010529 CTGCTTTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918628 8 + 163208435 CTGCTTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386028 8 - 74971481 CTGCTTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098668 8 - 78541002 CTGCTTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492305 8 + 26466322 CTGCTTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818923 8 + 43916225 CTGCTTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249505 8 + 75399963 CTGCTTTA i chlSab2.chr5 C 0 I 256 s manLeu1.NW_012101698v1 6816677 8 - 7209941 CTGCTTTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557143 8 + 3907144 CTGCTTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555446 8 - 44557958 CTGCTTTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369924 8 + 6628207 CTGCTTTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353139 8 - 5917169 CTTCTTTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305706 8 - 10531588 cTGCTTTA i aotNan1.NW_018500622v1 I 331 C 0 s canFam3.chr5 80485002 8 + 88915250 CTGCCTCA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952564 8 + 1009443 CTGCTTCA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489586 0 - 129401213 C e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=351177.000000 s hg38.chr16_GL383557v1_alt 74321 29 + 89672 AAGACTTCTAAGAAATAGCAAATGAAGAA s panTro5.chr16 21505821 29 - 81586097 AAGACTTCTAAGAAATAGCAAATGAAGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21566986 29 - 90481686 AAGACTTCTAAGAAATAGCAAATGAAGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800229 29 + 3010529 AAGACTTCTAAGAAATAGCAAATGAAGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918636 29 + 163208435 AAGACTTCTAAGAAATAGCAAATGAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386036 29 - 74971481 AAGACTTCTAAGAAATAGCAAATGAAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098676 29 - 78541002 AAGACTTCTAAGAAATAGCAAATGAAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492313 29 + 26466322 AAGACTTCTAAGAAATAGCAAATGAAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818931 29 + 43916225 AAGACTTCTAAGAAATAGCAAATGAAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249769 29 + 75399963 AAGACTTCTAAGAAATATCAAATGAAAAA i chlSab2.chr5 I 256 C 0 s manLeu1.NW_012101698v1 6816685 29 - 7209941 AAGACTTCTAAGAAATAGCAAATGAAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557151 29 + 3907144 AAGACTTCTAAGAAATAGCACATGAAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555454 29 - 44557958 AAGACTTCTAAGAAATAGTAAACGAAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369932 29 + 6628207 AAGACTTCTAAGAAATAGTAAATGAAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353147 29 - 5917169 AAGACTTCTAAGAAATAGTAAATGAAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305714 29 - 10531588 AAGACTTCTAAGAAATAGTAAATGAAAAA i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80485010 29 + 88915250 AAGCTCCCCATGAAATAATAAATAAAAAA i canFam3.chr5 C 0 I 965 s dasNov3.JH569970 952572 27 + 1009443 AAGATCTCTAAGAAATAGTAAGTGAAA-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489586 0 - 129401213 C e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=342564.000000 s hg38.chr16_GL383557v1_alt 74350 37 + 89672 CATTT-G------AAggccaggtacagtgggtcatgcctgtaat s panTro5.chr16 21505850 37 - 81586097 CATTT-G------AAggccaggtacagtgggtcatgcctgtaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567015 37 - 90481686 CATTT-G------AAggccaggtacagtgggtcatgcctgtaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800258 37 + 3010529 CATTT-G------AAggccaggtacagtgggtcatgcctgtaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918665 37 + 163208435 CATTT-G------AAggccaggtacagtgggtcatgcctgtaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386065 37 - 74971481 CATTT-G------GAAgccaggtccggtgagtcgtgcctgtaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098705 37 - 78541002 CATTT-G------GAAgccaggtccggtgagtcgtgcctgtaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492342 37 + 26466322 CATTT-G------GAAgccaggtccggtgagtcgtgcctgtaat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818960 37 + 43916225 CATTT-G------GAAgccaggtcccgtgagtcgtgcctgtaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249798 37 + 75399963 CATTT-G------GAggccaggtccggtgagttgtgcctgtaat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816714 37 - 7209941 CATTT-G------GAAgccaggtccggtgagtcgtgcctgtaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557180 37 + 3907144 CATTT-G------GAggccaggtccagtgagtcatgcctgtaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555483 38 - 44557958 CATTCAG------GAggccagatacggtgggttgtgcctgtaat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369961 37 + 6628207 CATTT-G------GAggccgggtacggtgggttgtgcctgtaat i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353176 37 - 5917169 CATTT-G------GAAgccaggtacggtgggttgtgcctgtaat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305743 37 - 10531588 CATTC-A------CAggccaggtatggtgggttgtgcctgtaat i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22489586 24 - 129401213 --------------------gatatggtggtgcatgcctttcat i mm10.chr8 C 0 C 0 s dasNov3.JH569970 952599 43 + 1009443 TATTT-GCAAAACAAAGGAAAGTTCAATGTAACATTTATATAAT i dasNov3.JH569970 C 0 I 169 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=648728.000000 s hg38.chr16_GL383557v1_alt 74387 63 + 89672 cccagcactttgg-gaggctgaggtggaggattgcttgag-cccaggagttcaagacctgtctgg s panTro5.chr16 21505887 63 - 81586097 cccagcactttgg-gaggctgaggtggaggattgcttgag-cccaggagttcaagacctgtctgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567052 63 - 90481686 cccagcactttgg-gaggctgaggtggaggattgcttgag-cccaggaattcaagacctgtctgg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800295 63 + 3010529 cccagcactttgg-aaggctgaggtggaggattgcttgag-cccaggagttcaagacctgtctgg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918702 63 + 163208435 cccagcactttgg-gaggccaaggtggaggattgcttgag-cccaggagttcaagaactgtctgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386102 63 - 74971481 cccagcactttgg-gaggcagaggtagaggactgcttgag-cccaggagttcaagatctgtctgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098742 63 - 78541002 cccagcactttgg-gaggcagaggtggaggactgcttgag-cccaggagttcaagatctgtctgg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492379 63 + 26466322 cccagcactttag-gaggcagaggtggaggactgcttgag-cccaggagttcaagatctgtctgg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20818997 63 + 43916225 cccagcactttgg-gaggcagaggtggaggactgcttgag-cccaggagttcaagatctgtctgg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249835 63 + 75399963 cccagcactttgg-gaggcagaggcggaggactgcttgag-cccaggagttcaagatctgtctgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816751 63 - 7209941 cccagcactttgg-gaggcagaggtggaggactgcttgag-cccaggagttcaagatctgtctgg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557217 63 + 3907144 cccagcactttgg-gaggcagaggcagaggactgcttgag-cccaggagttcaagatttgtctgg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555521 64 - 44557958 cccagcactctggggaggctgaggtggaggattacttgag-cccaggagttcaagacctgtttgg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6369998 64 + 6628207 cccagcactctggagaggctgaggtggaggattacttgag-cccaggagttcaagacctgtgtgg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353213 64 - 5917169 cccagcactctggggaggctgaggtggaggattacttgag-cccaggagttcaagacctgtctga i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305780 65 - 10531588 cctagcactctggggaggctgaggtggaggattatttgagtcctaggagttcaagacctgtctgg i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22489610 53 - 129401213 cccagctctcagg--aggcaaaggcagg---------cag-tccttgagttccaggccagtctgg i mm10.chr8 C 0 I 457 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=2826480.000000 s hg38.chr16_GL383557v1_alt 74450 330 + 89672 ac-aacatggtgaaaccctgact---------ctacaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacctgggagggtgaagtggtaggatcacctgagcctgggaggttgaggctgcagtgagccgtgaccgtgccactgctctccagcctggataacacaatgagaccctgcctcaaaaaagtaagcaaacaaacaaaaaaaC---------CAACCAACT----AACC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAATGTAACATGTATGTAGTTTTTAAAAACTC-----ACAAAATG-A--TTTTTttttcattgtatacccttttgtactatt s panTro5.chr16 21505950 331 - 81586097 ac-aacatggtgaaaccctgact---------ctgcaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacctggaagggtgaagtggtaggatcacctgagcctgggaggttgaggctgcagtgagccgtgaccgtaccactgctctccagcctggataacacaatgagactctgcctcaaaaaagtaagcaaacaaacaaaaaaaC---------CAACCAACT----AACC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAATGTAACATGTATGTAGTTTTTAAAAACTC-----ACAAAATG-A-TTTTTTTTTTCATTGTATATCCTTTTGTACTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567115 329 - 90481686 ac-aacatggtgaaaccctgact---------ctgcaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacctggaagggtgaagtggtaggatcacctgagcctgggaggttgaggctgcagtgagccgtgaccgtaccactgctctccagcctggataacacaatgagactctgcctcaaaaaagtaagcaaacaaacaaaaaaaC---------CAACCAACT----AACC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAATGTAACATGTATGTAGTTTTTAAAAACTC-----ACAAAATG-A---TTTTTTTTCATTGTATATCCTTTTGTACTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800358 335 + 3010529 ac-aacatggtgaaaccctgact---------ctacaaaaaattagccgggcatggtggcgcacacctgtagtcccagctacctgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctgcagtgagctgtgaccgtgccactgctctccagcctggataacacaatgagaccctgcctaaaaaaagtaagcaaagaaacaaaaaaaC---------CAACCAACT----AACC---------AAACAAAAAAGAATCTGGAGAATAAGGAAAAGTTGAATGTAACATTTATGTAGTTTTTAAAAACTCACAAAACAAAATG-A--TTTTTttttcattgtatacccttttgtactatt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53918765 341 + 163208435 ac-aaca-ggtgaaaccctgact---------ctacaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacctgagagggtgaagtgggaggatcatctgagcctgggaggttgaggctgcagtgagccgtgaccgtgccacagctctccagcctggataacacaatgagaccctgcctcaaaaaagtaagcaaacaaac-aaaaaaC---------CAACCAACT----AATCaaaaaaaaaaaaaaaaaaagaatctggagaataaagaaaaGTTGAATGTAACATTTATGTAGTTTTTAAAAATTCACAAAACaaaaag-a---ttttttttcatagtatacccttttgtactatt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386165 331 - 74971481 gc-aacatggtaaaaccctggat---------ctacaaaaaattagccgggcatggtggtgcacacctgtagtcccagttacccgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctgcagtgagtcgtgatggtgccactgctctccagcctggaaaacacactgagaccctgcctc-aaaaagtaagcaaacaaac-aaaaaaC---------CAACCAACC----AAAC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAAAGTAACATTTATGTAATTTTTAAAAACTCACAAAACAAAATG-----TTTTTTTTCATTGTATACGCTTTTGTACTATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21098805 331 - 78541002 gc-aacatggtaaaaccctggat---------ctacaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacccgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctgcagtgagtcgtgatggtgccactgctctccagcctggaaaacacactgagaccctgcctc-aaaaagtaagcaaacaaac-aaaaaaC---------CAACCAACC----AACC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAAAGTAACATTTATGTAATTTTTAAAAACTCACAAAACAAAATG-----TTTTttttcattgtatacgcttttgtactatt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492442 332 + 26466322 gc-aacatggtaaaaccctggat---------ctacaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacccgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctgcagtgagtcgtgatggtgccactgctctccagcctggaaaacacactgagaccctgcctc-aaaaagtaagcaaacaaac-aaaaaaC---------CAACCAACC----AAAC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAAAGTAACATTTATGTAATTTTTAAAAACTCACAAAACAAAATG----TTTTTTTTTCATTGTATACGCTTTTGTACTATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819060 333 + 43916225 ac-aacatggtaaaaccctggat---------ctacaaaaaattagccgggcatggtggtgcacacctgtagtcccagctacccgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctgcagtgagtcgtgatggtgccactgctctccagcctggaaaacacactgagaccctgcctc-aaaaagtaagcaaacaaac-aaaaaaC---------CAACCAACC----AAAC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAAAGTAACATTTATGTAATTTTTAAAAACTCACAAAACAAAATG-A--TTTTTTTTTCATTGTATACGCTTTTGTACTATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58249898 332 + 75399963 gc-aacatggtaaaaccctgtct---------ctacaaaaaattagccgggcatggtggtgcacacctatagccccagctacccgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctacagtgagccgtgatggtgccactgctctccagcctggaaaacacactgagaccctgcctcaaaaaagtaagcaaacaaat-aaaaaac---------caaccaaac----aaac---------aaacaaaaaagaaTCTGGAGAATAAAGAAAAGCTGAAAGTAACATTTATGTAATTTTTTAAAACTCACCAAACAAAATG-A--TTTTTTTT--ATTGTATACGCTTTTATACTATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6816814 328 - 7209941 ac-aacatggtaaaaccctggat---------ctacaaaaaattagccgggcatggtggtgcagacctgtagtcccagctacccgggagggtgaagtgggaggatcacctgagcctgggaggttgaggctgcagtgagtcgtgatggtgccactgctctccagcctggaaaacacactgagaccctgcctc-aaaaagtaagcaaacaaac-aaaaaaC---------CAACCAACC----AAAC---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAAAGTAACATTTATGTAATTTTTAAAAACTC-----ACAAAATG-A--TTTTTTTTTCATTGTATACGCTTTTGTACTATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557280 331 + 3907144 gc-aacacggtaaaaccctatct---------ctacaaaaaattagcaaggcgtggtggtgcacacctgtagtcccagctacccgggagggtgaagtgggaggatgacctgagcctgggaggttgaggctgcagtgagccgtgatggtgccactgctctccagcctggaaaacacaatgagaccctgcctcaaaaaagtaagcaaacaaac-aaaaaaC---------CAACCAAC--------C---------AAACAAAAAAGAATCTGGAGAATAAAGAAAAGTTGAAAGTAACATTTATGTAATTTTTTAAAACTCACAAAACAAAATGAA--TTTTTTTTTCATTGTATACGCTTTTGTACTGTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555585 345 - 44557958 acaaacatggtgaaatcctgtctctacaaaaactacaaaaaattagttgggcatggtattgcacatctttagtcccata-aggtgggaggccaaggtgggaggatagcctgagcccaggaggttgaggctgcagtgagctgtgacggaaccactgctatccagcccggat-acacgatgagaccctgtctcaaaaaagtaagctaacaaac-aaagaatc--aacaaccaaccaacc----aaac---------aaacaaaaaaGAATCTGGAGAAT-----AAAGCTGAATGTAACATTCATGTAATTTTTAAAAATTCACAAAACAAAAAG-G-TTTTTTCCCCCATTGTATAACCTTTTGTACTATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6370062 338 + 6628207 acaaacatggtgaaatcctgtctctacaaaaactacaaaaaattagctgggcatggtgttgcacatctttagttccata-aggtgggaggccaaggtgggaggatagcctgagcccaggaggttgaggctgtagtgagccatgatggaacccctgctatccagcccggataacacaatgagaccctgtctcaaaaaagtaagcaaacaaac-gaaaaaT---------CAACCAAAC-----AAC---------AAACAAAAAAGAATCTGGAGAAT-----AAAGTTGAATGTAACATTCATTTAATTTTTAAAAACTCACAAAACAAAATG-A-TCTTTTTCCCCATTGTATAACATTTTGTATTATT i saiBol1.JH378225 C 0 I 355 s cebCap1.NW_016107433v1 3353277 328 - 5917169 acaaacatggtgaaaccctgtctctacaaaaactacaaaaaattagctgggcatggtgttgcacgtctttagtcccat--------------aaggtgggaggatagcctgagcccaggaggttgaggctgcagtgtgccgtgatggaaccactgctatccagcctggataacacgatgagaccctgtctcaaaaaagtaagcaaacaaaa-aaaaaaa-------aTAAACCAAAC-----AAC---------AAACAAAAAAGAATCTGAAGAAT-----AAAGTTGAATGTAACATTCATGTAATTTTTTAAAACTCACAAAACAAAATG-ATTTTTTTTCCCCATTGTATAACCTTTTGTATTATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9305845 352 - 10531588 acaaatatggtgaaaccctgtctctacaaaaactacaaaaaattagctgggcatggtgtttcacatctttagtcccata-aggtgggaggccaaggtgggaggatagcctgagcccaggaggttgaggctgcagtgagccatgatggaaccactgccaaccagcccggagaacacgatgagaccctgtctcaaaaaagtaagcaaacaaac-aaaaaaatcaaccaaccaaccaaacaaacaaac---------aaacaaaaaagaaTCTGGAGAAT-----AAAGTTGAATGTAATATTCATGTAATTTTTAAAAACTCACAAAACAAAATG-A-TTTTTTTCCCcattgtataaccttttgtactatt i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=105434.000000 s hg38.chr16_GL383557v1_alt 74780 12 + 89672 tgag-tttttaaa s panTro5.chr16 21506281 12 - 81586097 TGAG-TTTTTAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567444 12 - 90481686 TGAG-TTTTTAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800693 12 + 3010529 tgag-tttttaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919106 12 + 163208435 tgag-tttttaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386496 12 - 74971481 TGAG-TTTTTAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099136 12 - 78541002 tgag-tttttaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492774 12 + 26466322 TGAG-TTTTTAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819393 12 + 43916225 TGAG-TTTTTAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250230 12 + 75399963 TGAA-TTTTAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817142 12 - 7209941 TGAG-TTTTTAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557611 11 + 3907144 TGAG-TTTTT-AA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555930 12 - 44557958 TGAA-TTTTTTAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6370755 12 + 6628207 TGAA-TTTTTAAA i saiBol1.JH378225 I 355 C 0 s cebCap1.NW_016107433v1 3353605 13 - 5917169 TGAATTTTTTAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306197 12 - 10531588 tgaa-tttttaaa i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e otoGar3.GL873566 13734510 606 + 13852661 I a score=924409.000000 s hg38.chr16_GL383557v1_alt 74792 90 + 89672 aatatgcacatggctgggcgcggtggctcacgcctataatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggagtt s panTro5.chr16 21506293 90 - 81586097 AATATGCACATggctgggcgaggtggctcatgcctataatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggagtt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567456 90 - 90481686 AATATGCACATggctgggcgaggtggctcatgcctataatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggagtt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800705 90 + 3010529 aatatgcacatggctgggcgcggtggctcacgcctataatcccagcactttgggaggccaaggcgggcggatcacctgaggtcgggagtt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919118 90 + 163208435 aatatgcacatggctgggcactgtggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcatctgaagtcgggagtt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386508 90 - 74971481 AATATGCACATggccaggcgtagtggctcatgcctgtaatcccagcactttgggaggccaaggcgagcgcatcacctgcgatcgggagtt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099148 90 - 78541002 aatatgcacatggccaggcgtagtggctcatgcctgtaatcccagcactttgggaggccaaggcgagcgcatcacctgcgatcgggagtt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492786 90 + 26466322 AATATGCACATggccaggcgtagtggctcatgcctgtaatcccagcactttgggaggccaaggcaagcgcatcacctgcgatcgggagtt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819405 90 + 43916225 AATATGCACATggccaggcgtagtggctcatgcctgtaatcccagcactttgggaggccaaggcgagcgcatcacctgcgatcgggagtt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250242 90 + 75399963 AATATGCACATggccaggcgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcgagcgcatcacctgagatcgggagtt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817154 90 - 7209941 AATATGCACATggccaggcgtcgtggctcatgcctgtaatcccagcactttgggaggcaaaggcgagcgcatcacctgcgatcgggagtt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557622 90 + 3907144 AATATGCACATggccaggcgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcgagcgcatcacctgagatcaggagtt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21555942 90 - 44557958 AATATGCACATGATTgagcaaggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcatctgagtttgggagtt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6370767 90 + 6628207 AATACGCACATGCTTgggcaacgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacctgaggttgggagtt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353618 90 - 5917169 AATATGCACATGATTgggcaaggtggctcacacctgtaatcctagcactttgggaggctgaggtgggcagatcacctgaggttgggagtt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306209 90 - 10531588 aatatgcacatgattgggcaaggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcagaccatctgaggttgggagtt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13735116 90 + 13852661 aacaagaaaatagccaggcattgtggcgggtgcctgtagtcccagctactctggaggctgaggcaagagaatcacctaagcccaggagtt i otoGar3.GL873566 I 606 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I a score=1165211.000000 s hg38.chr16_GL383557v1_alt 74882 125 + 89672 caagaccagcctgacc----------aaccccatctctactaaaaatac-aaaaaattagccgg---------gcgtggtggcgcatgcatgtaatcccagctacttggggggctaaagcaggagaatcgcttgaacccaggagg s panTro5.chr16 21506383 125 - 81586097 caagaccagcctgacc----------aaccccatctctactaaaaatac-aaaaaattagccgg---------gcgtggtggcgcatgcatgtaatcccagctacttggggggctaaagcaggagaatcgcttgaacccaggagg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567546 125 - 90481686 caagaccagcctgacc----------aaccccatctctactaaaaatac-aaaaaattagccgg---------gcgtggtggcgcatgcatgtaatcccagctacttggggggctaaagcaggagaatcgcttgaacccaggagg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800795 124 + 3010529 caagaccagcct-acc----------aaccccatctctactaaaaatac-aaaaaattagccgg---------gcgtggtggcgcatgcatgtaatcccagctacttggggggctaaagcaggagaatcgcttgaacccaggagg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919208 125 + 163208435 caagaccagcctgacc----------aaccccatctctactaaaaatac-aaaaaattagccag---------gcgtggtggtgcatgcctgtaatcccagctactcagggggctaaagcaggagaatcgcttgaacccaggagg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386598 125 - 74971481 caagaccagtctgacc----------aaccccgtctttactaaaaatac-aaaaaattagctgg---------gcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaaccaggagaattgcttgaactcaggagg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099238 125 - 78541002 caagaccagcctgacc----------aaccccgtctttactaaaaatac-aaaaaattagctgg---------gcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaaccaggagaattgcttgaactcaggagg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14492876 125 + 26466322 caagaccagcctgacc----------aaccccgtctttactaaaaatac-aaaaaattagctgg---------gcatggtggcgcatgcctgtaatcccagctactcaggaggctgaaccaggagaattgcttgaactcaggagg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819495 122 + 43916225 caagaccagcctgacc----------aaccccgtctttactaaaaatac-aaaaaattagctgg---------gcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaacc---agaattgcttgaactcaggagg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250332 125 + 75399963 caagaccagcctgacc----------aaccccgtctctacaaaaaatac-aaaaaattagctcg---------gcgtggtggcgcatgcctgtaatcccagctactcgggaggctgaaccaggagaattgcttgaacccaggagg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817244 125 - 7209941 caagaccagcctgacc----------aaccccgtctttactaaaaatac-aaaaaattagctgg---------gcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaaccaggagaattgcttgaactcaggagg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557712 134 + 3907144 caagaccagcctgacc----------aacccggtctctactaaaaatac-aaaaaattagctgggatggtagtgcatgctggtgcatgcctgtaatcccagctactcgggaggctgaaccaggagaattgcttgaacccaggagg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556032 136 - 44557958 cgagaccagcctgaccaatatggagaaaccctgcctctactaaaaatacaaaaaaattagccgg---------gcacggtggtgcatgcctgtaattctagctatttgggaggctgaggcaggagaatcacttgaacttgggaga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6370857 135 + 6628207 ccagaccagcctgaccaatatggagaaaccctgtctctactaaaaatac-aaaaaattagccgg---------gcatggtggcgcatgcctataatcctagttttttgggaggctgaggcaggagaatcacttgaacctgggagg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353708 134 - 5917169 cgagaccagcctgaccaatatggagaaaccctgtctctactgaaaatac--aaaaattagccgg---------gcatggtggcgcatgcctgtaatcctagctattcgggaggctggggcaggagaatcacttgaacctgggagg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306299 136 - 10531588 cgagaccagcctgaccaatacggagaaaccctgtctctactaaaaacacaaaaaaattagccgg---------gcatggtggcgcatgcctgtaatcctagctattcgggaggctgaggcaggagaatcacttgaaccagggagg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e otoGar3.GL873566 13735206 0 + 13852661 C a score=648469.000000 s hg38.chr16_GL383557v1_alt 75007 65 + 89672 cggaggtttcggtgagctgaggtggtgccattgcactccagcttgggcaacaagagt----gaaactcc s panTro5.chr16 21506508 65 - 81586097 cggaggtttcggtgagctgaggtggtgccattgcactccagcttgggcaacaagagt----gaaactcc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567671 65 - 90481686 cggaggtttcggtgagctgaggtggtgccattgcactccagcttgggcaacaagagt----gaaactcc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800919 65 + 3010529 cggaggtttcggtgagtcgaggtggtgccactgcactccagcctgggcaacaagagt----gaaactcc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919333 65 + 163208435 cggaggttttggtgagccgaggtggtgccattgcacttcagcctgggcaacaagagt----gaaactcc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386723 65 - 74971481 tggaggtttcggtgagccgagatggcgccattgcactccagcctgggcaacaagagt----gaaactct i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099363 65 - 78541002 tggaggtttcggtgagccgagatggcgccattgcactccagcctgggcaacaagagc----gaaactct i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493001 65 + 26466322 tggaggtttcggtgagccgagatggcgccattgcactccagcctgggcaacaagagc----aaaactct i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819617 65 + 43916225 tggaggtttcggtgagccgagatggcgccattgcactccagcctgggcaacaagagc----gaaactct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250457 65 + 75399963 tggaggtttcggtgagccgagatggcgccgttgcactccagcctgggcaacaagagc----aaaactct i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817369 65 - 7209941 tggaggtttcggtgagccgagatggcgccattgcactccagcctcggcaacaagagc----aaaactct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557846 65 + 3907144 tggaggtttcggtgagccgagatggtgccgttgcactccagcctgggcaacaagagc----gaaactct i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556168 69 - 44557958 tgtaggttgcagtgagccgagatcatgccattgcactccagcctgggcaacaAGAGTAAAAAAAACTCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6370992 65 + 6628207 tgtaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacgagagt----gaaactcc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353842 65 - 5917169 tgtaggttgaagtgagctgagatcatgccattgcactccagcctgggcaacaagagt----gaaactcc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306435 65 - 10531588 tgtaggttgcagtgagctgagatcatgccattgcactccggcctgggccacaagagt----gaaactcc i aotNan1.NW_018500622v1 C 0 I 23 s otoGar3.GL873566 13735206 63 + 13852661 gggaggttgctgtgagctgtgg-gacaccacggcactctaccaagggcgat-atagt----gagactct i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I a score=-32251.000000 s hg38.chr16_GL383557v1_alt 75072 13 + 89672 gtc--------t---------------------caa----aaataa----- s panTro5.chr16 21506573 17 - 81586097 atc--------t---------------------caaaaataaataa----- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567736 7 - 90481686 atc--------t---------------------caa--------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800984 7 + 3010529 atc--------t---------------------caa--------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919398 9 + 163208435 gtc--------t---------------------caa--------aa----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386788 7 - 74971481 gtc--------t---------------------caa--------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099428 7 - 78541002 gtc--------t---------------------caa--------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493066 7 + 26466322 gtc--------t---------------------caa--------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819682 7 + 43916225 gtc--------t---------------------caa--------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250522 7 + 75399963 gtc--------t---------------------caa--------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817434 7 - 7209941 gtc--------t---------------------caa--------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557911 7 + 3907144 gtc--------t---------------------caa--------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556237 3 - 44557958 ATC------------------------------------------------ i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371057 3 + 6628207 atc------------------------------------------------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353907 11 - 5917169 gtcaaaaacaa---------------------------------------- i cebCap1.NW_016107433v1 C 0 I 6 s otoGar3.GL873566 13735269 33 + 13852661 gtc--------tcTTCCCCGCTCGCCCCGCCCCCAa----------aaagg i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e aotNan1.NW_018500622v1 9306500 23 - 10531588 I a score=41334.000000 s hg38.chr16_GL383557v1_alt 75085 25 + 89672 ataaataaataaataaataaataaa s panTro5.chr16 21506590 25 - 81586097 ataaataaataaataaataaataaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567743 19 - 90481686 ------aaataaataaataaataaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800991 7 + 3010529 ------------------aaataaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919407 25 + 163208435 ataaataaataaacaaataaataaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386795 15 - 74971481 ----------aaacaaatgaataaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099435 15 - 78541002 ----------aaacaaatgaataaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493073 15 + 26466322 ----------aaacaaatgaataaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819689 15 + 43916225 ----------aaacaaatgaataaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250529 10 + 75399963 ----------aaa-----aaatgaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817441 15 - 7209941 ----------aaacaaatgaataaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557918 15 + 3907144 ----------aaacaaatgaataaa i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6371060 13 + 6628207 ---------aaaacaaaaaaac--- i saiBol1.JH378225 C 0 I 2 s otoGar3.GL873566 13735302 9 + 13852661 ----------------gtgaagaga i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80485039 965 + 88915250 I e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e aotNan1.NW_018500622v1 9306500 23 - 10531588 I e cebCap1.NW_016107433v1 3353918 6 - 5917169 I e calJac3.chr20 21556240 0 - 44557958 C a score=8281.000000 s hg38.chr16_GL383557v1_alt 75110 1 + 89672 t s panTro5.chr16 21506615 1 - 81586097 t i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567762 1 - 90481686 t i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800998 1 + 3010529 t i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919432 1 + 163208435 t i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386810 1 - 74971481 t i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099450 1 - 78541002 t i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493088 1 + 26466322 t i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819704 1 + 43916225 t i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250539 1 + 75399963 t i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817456 1 - 7209941 t i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557933 1 + 3907144 t i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13735311 1 + 13852661 t i otoGar3.GL873566 C 0 I 41 s canFam3.chr5 80486004 1 + 88915250 t i canFam3.chr5 I 965 C 0 e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e aotNan1.NW_018500622v1 9306500 23 - 10531588 I e cebCap1.NW_016107433v1 3353918 6 - 5917169 I e saiBol1.JH378225 6371073 2 + 6628207 I e calJac3.chr20 21556240 0 - 44557958 C a score=45957.000000 s hg38.chr16_GL383557v1_alt 75111 10 + 89672 aaataaaagc s panTro5.chr16 21506616 10 - 81586097 aaataaaAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567763 10 - 90481686 aaataaaAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 800999 10 + 3010529 aaataaaagc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919433 10 + 163208435 aaataaaagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386811 10 - 74971481 aaataaaTGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099451 10 - 78541002 aaataaatgc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493089 10 + 26466322 aaataaaTGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819705 10 + 43916225 aaataaaTGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250540 10 + 75399963 aaataaaTAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817457 10 - 7209941 aaataaaTGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557934 10 + 3907144 aaataaaTGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556240 3 - 44557958 -----AAA-- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371075 8 + 6628207 aaacaaaa-- i saiBol1.JH378225 I 2 C 0 s cebCap1.NW_016107433v1 3353924 8 - 5917169 aaacaaaa-- i cebCap1.NW_016107433v1 I 6 C 0 s otoGar3.GL873566 13735353 5 + 13852661 aaatt----- i otoGar3.GL873566 I 41 C 0 s canFam3.chr5 80486005 10 + 88915250 aaaaatatgc i canFam3.chr5 C 0 C 0 e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I e aotNan1.NW_018500622v1 9306500 23 - 10531588 I a score=33255.000000 s hg38.chr16_GL383557v1_alt 75121 3 + 89672 aca s panTro5.chr16 21506626 3 - 81586097 ACA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567773 3 - 90481686 ACA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801009 3 + 3010529 aca i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919443 3 + 163208435 aca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386821 3 - 74971481 ACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099461 3 - 78541002 aca i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493099 3 + 26466322 ACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819715 3 + 43916225 ACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250550 3 + 75399963 ACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817467 3 - 7209941 ACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557944 3 + 3907144 ACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556243 3 - 44557958 ACA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371083 3 + 6628207 aCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353932 3 - 5917169 aCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306523 3 - 10531588 aca i aotNan1.NW_018500622v1 I 23 C 0 s otoGar3.GL873566 13735358 3 + 13852661 gtg i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486015 3 + 88915250 aaa i canFam3.chr5 C 0 C 0 e micMur3.chr20 54954107 564 + 72247402 I e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I a score=933364.000000 s hg38.chr16_GL383557v1_alt 75124 77 + 89672 ttattttcataataa----taTCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AACGTCCT----AC- s panTro5.chr16 21506629 77 - 81586097 TTATTTTCATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AACGTCCT----AC- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567776 77 - 90481686 TTATTTTCATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AACGTCCT----AC- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801012 77 + 3010529 ttattttcataataa----taTCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AACGTCCT----AC- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919446 77 + 163208435 ttattttcataataa----tatcaaaaGAAGACAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AACGTCCT----AC- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386824 77 - 74971481 TTATTTTCATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099464 77 - 78541002 ttattttcataataa----tatcaaaaGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493102 77 + 26466322 TTATTTTCATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819718 77 + 43916225 TTATTTTCATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250553 77 + 75399963 TTATTTTCATAATAA----TATCAAAAGAAGAGAAATCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817470 77 - 7209941 TTTTTTTCATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 557947 77 + 3907144 TTATTTTGATAATAA----TATCAAAAGAAGAGAAACCTATTTCCTGTATACATCCATCTAATAAATCCTC--AATGTCCT----AC- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556246 76 - 44557958 TTATTTTCATAATAA----TATCAAAAGGAGAGAAACCTATTTCCTGTATACATTCATTTAATACATTCTC--AATGT-CT----AA- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371086 76 + 6628207 TTATTTTCATAATAA----TATCAAAAGGAGAGACATCTATTTCCTGTATACATTCATTTAATACATTCTC--AATGT-CT----AA- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3353935 76 - 5917169 TTATTTTCATAATAA----TATCAAAAGGAGAGAAACCTATTTCCTGTATACATTCATTTAATACATCCTC--AATGT-CT----AA- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306526 76 - 10531588 ttattttcataacaa----taTCAGAAGGAGAGAAACCTATTTCCTGTATACATTTATTTAATACATGTTC--AGTGT-CT----AA- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954671 80 + 72247402 ttattttcataataa----taTCAAAAGAAGAAAAACCAATTTCCTGTATGCATTCA--TAATAAATTCTAATAAACT-CTGCCCAA- i micMur3.chr20 I 564 I 1 s otoGar3.GL873566 13735361 78 + 13852661 tgattttcataataataTCTATCAAAAGAAGAAATACCAATTTCCTTTATGCATTTG--TAATAAATTCTG--AATCT-CT----AA- i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80486018 77 + 88915250 ttatttatataataa----taCCAAAAGAAAGAAAAACAATTTCCTTTATTCATTCATCCAATAAATTCTG--AATGC-CT----AAC i canFam3.chr5 C 0 C 0 e mm10.chr8 22489663 457 - 129401213 I e proCoq1.NW_012152729v1 2961119 1028 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I a score=947228.000000 s hg38.chr16_GL383557v1_alt 75201 62 + 89672 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT s panTro5.chr16 21506706 62 - 81586097 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567853 62 - 90481686 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801089 62 + 3010529 TTATAATCACAGGAAACCCAGTCCTGCTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919523 62 + 163208435 TTATAATCACAGGAAACCCAGGCCTAGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386901 62 - 74971481 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099541 62 - 78541002 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493179 62 + 26466322 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819795 62 + 43916225 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAATTTTAGAATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250630 62 + 75399963 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817547 62 - 7209941 TTATAATCACAGGAAACTCAGTCCTGGTGACACAGTCCTTCATTCAAATAGTTTTAGAATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558024 62 + 3907144 TTATAATCACAGGAAACACAGTCCTGGTGACACAGTCCTTCATCCAAATAGTTTTAGAATTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556322 62 - 44557958 TTATAACCACAGGAAACCCAGTCCTGGTGACACAGTCTTTCATTAAAATAATTTCAGAATTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371162 62 + 6628207 TTATAATCACAGGAAACCCAGTCCTGGTAACATAGTCTTTCATTCAAATAGTTTTAGAATTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354011 62 - 5917169 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCTTTCATTCAAATAGTTTTAGAATTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306602 62 - 10531588 TTATAATCACAGGAAACCCAGTCCTGGTGACACAGTCTTTTATTCAAATAGTTTCAGAATTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954752 62 + 72247402 TTATAATCACAGGAAACCCAGTTCTGGTGACACAGCTCTGCATTCAAATGGTTTTAGAATTT i micMur3.chr20 I 1 C 0 s proCoq1.NW_012152729v1 2962147 62 + 9850184 TTATAATCACAGGAAACCCAGTTCTGATGACACAGTCCTTCATTCAAAGAGTTTTAGAATTT i proCoq1.NW_012152729v1 I 1028 C 0 s otoGar3.GL873566 13735440 62 + 13852661 TTATAATGACAGGAAATAAGATTCTGGTGATACAGTCCTTCATTCAGATAGTTTTAGAATTT i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80486095 49 + 88915250 TT-------------ACCTAGTTCTGTTGACATAGTACTTCATTCAAATCATTTAAGAGTTT i canFam3.chr5 C 0 C 0 e mm10.chr8 22489663 457 - 129401213 I e dasNov3.JH569970 952642 169 + 1009443 I a score=68854.000000 s hg38.chr16_GL383557v1_alt 75263 4 + 89672 ATAC s panTro5.chr16 21506768 4 - 81586097 ATAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567915 4 - 90481686 ATAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801151 4 + 3010529 ATAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919585 4 + 163208435 ATAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386963 4 - 74971481 ATAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099603 4 - 78541002 ATAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493241 4 + 26466322 ATAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819857 4 + 43916225 ATAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250692 4 + 75399963 ATAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817609 4 - 7209941 ATAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558086 4 + 3907144 ATAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556384 4 - 44557958 ATAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371224 4 + 6628207 ATAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354073 4 - 5917169 ATAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306664 4 - 10531588 ATAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954814 4 + 72247402 ATAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2962209 4 + 9850184 ATAC i proCoq1.NW_012152729v1 C 0 I 424 s otoGar3.GL873566 13735502 4 + 13852661 GTAC i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22490120 4 - 129401213 ACAC i mm10.chr8 I 457 C 0 s canFam3.chr5 80486144 2 + 88915250 --AC i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 952642 169 + 1009443 I a score=452237.000000 s hg38.chr16_GL383557v1_alt 75267 49 + 89672 AATTTATGATGCAAACTAAGTAA-CCTCAAAATTCAGAATGGGAATTATG------ s panTro5.chr16 21506772 49 - 81586097 AATTTATGATGCAAACTAAGCAA-CCTCAAAATTCAGAATGGGAATTTTG------ i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567919 49 - 90481686 AATTTATGATGCAAACTAAGTAA-CCTCAAAATTCAGAATGGGAATTTTG------ i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801155 43 + 3010529 AATTTATGATGCAAACTAAGTAA-CCTCAAAATTCAGAATGGGA------------ i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919589 43 + 163208435 AATTTATGATGCAAACTAAGTAA-CCTCAAAATTCAGAATGGGA------------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21386967 39 - 74971481 AATTTGTGGTGTAAAC----TAA-CCTCAAAATTCAGAATGGGA------------ i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099607 39 - 78541002 AATTTGTGGTGTAAAC----TAA-CCTCAAAATTCAGAATGGGA------------ i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493245 39 + 26466322 AATTTGTGGTGTAAAC----TAA-CCTCAAAATTCAGAATGGGA------------ i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819861 39 + 43916225 AATTTGTGGTGTAAAC----TAA-CCTCAAAATGCAGAATGGGA------------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250696 39 + 75399963 AATTTGTGGTGTAACC----TAA-CCTCAAAATTCAGAATGGGA------------ i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817613 39 - 7209941 AATTTGTGGTGTAAAC----TAA-CCTCAAAATTCAGAATGGGA------------ i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558090 43 + 3907144 AGTTTGTGGTATAAACTAAGTAA-CCTCAAAATTCAGAATGGGA------------ i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556388 43 - 44557958 AATTTATGATATGAACTAACCAA-CCTCAAAATTCAGAATGGGA------------ i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371228 43 + 6628207 AATTTATGATATGAACTAACTAA-CCTCAAAATTCACAATGGGA------------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354077 43 - 5917169 AATTTATGATATGAACTAACTAA-CCTCAAAATTCAGAATGGGA------------ i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306668 43 - 10531588 AATTTATGATATGAACTAACTAA-CCTCAAAATTCAGAATGGGA------------ i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954818 40 + 72247402 AGTTTATGATGTG----AAGTAACCCTGAAAATTCAGAATGTGA------------ i micMur3.chr20 C 0 I 36 s otoGar3.GL873566 13735506 44 + 13852661 AGTTTATGATGTGAACTAAGTATCCCTCAAAATTCAGAATGGGA------------ i otoGar3.GL873566 C 0 I 5 s mm10.chr8 22490124 43 - 129401213 AGCCTGGGCTACAGACTGAGTGG-CACTCAGACTCAGAATAGAA------------ i mm10.chr8 C 0 C 0 s canFam3.chr5 80486146 50 + 88915250 AGTTTGTGGTACCAACTAAATAACCCTCAAAATTCAGAATAAGA------AAAATG i canFam3.chr5 C 0 C 0 e proCoq1.NW_012152729v1 2962213 424 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I a score=276950.000000 s hg38.chr16_GL383557v1_alt 75316 37 + 89672 AGCCTAGAATTCAGGCTCTAGAATTC------AGAGCCTAAAC s panTro5.chr16 21506821 37 - 81586097 AGCCTAGAATTCAGGCTCTAGAATTC------AGAGCCTAAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21567968 37 - 90481686 AGCCTAGAATTCAGGCTCTAGAATTC------AGAGCCTAAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801198 28 + 3010529 -----AAAAT----GTTCTAGAATTC------AGAGCCTAAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919632 28 + 163208435 -----AAAAC----GTTCTAGAATTC------AGAGCCTAAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387006 28 - 74971481 -----AAAAC----GTTCTAGATTTC------AGAGCCTAAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099646 28 - 78541002 -----AAAAC----GTTCTAGATTTC------AGAGCCTAAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493284 28 + 26466322 -----AAAAC----GTTCTAGATTTC------AGAGCCTAAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819900 28 + 43916225 -----AAAAC----GTTCTAGATTTC------AGAGCCTAAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250735 28 + 75399963 -----AAAAC----GTTCTAGATTTC------AGAGCCTACAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817652 28 - 7209941 -----AAAAC----GTTCTAGATTTC------AGAGCCTAAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558133 28 + 3907144 -----AAAAC----GTTCTAGATTTC------AGAGCCTAAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556431 28 - 44557958 -----AAAAC----ATTCTAGATTTC------AGAGCCTAAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371271 28 + 6628207 -----AAAAC----ATTCCAGATTTC------AGAGCCCAAAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354120 28 - 5917169 -----GAAAC----ATTCTAGATTTC------AGAGCCCAAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306711 28 - 10531588 -----AAAAC----ATTCTAGATTTC------AGAGCCCAAAC i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13735555 23 + 13852661 --------------GTTCTGGATTTC------AGAGCCTGAGC i otoGar3.GL873566 I 5 I 8 s mm10.chr8 22490167 31 - 129401213 --------GC----GCTCTGGACCTTGGATGGGGAGTACAAAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80486196 22 + 88915250 ---------------TTCTGGATTTC------AGAGCCTGAAC i canFam3.chr5 C 0 I 8 e micMur3.chr20 54954858 36 + 72247402 I e proCoq1.NW_012152729v1 2962213 424 + 9850184 I e dasNov3.JH569970 952642 169 + 1009443 I a score=2624989.000000 s hg38.chr16_GL383557v1_alt 75353 156 + 89672 AAACTTCCTTACCTTTGTCTTTAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTATGAAAGAAA--------------GAGTATTTGTACA---TTTTTCTT------CTAAAAAGTTACTCCT s panTro5.chr16 21506858 157 - 81586097 AAACTTCCTTACCTTTGTCTTTAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTATGAAAGAAA--------------GAGTATTTGTACA--TTTTTTCTT------CTAAAAAGTCACTCCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568005 157 - 90481686 AAACTTCCTTACCTTTGTCTTTAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTATGAAAGAAA--------------GAGTATTTGTACA--TTTTTTCTT------CTAAAAAGTCACTCCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801226 157 + 3010529 AAACTTCCTTACCTTTGTCTTTAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAATTTCCCTGA-G-ATTTTTCTTATGAAAGAAA--------------GAGTATTTGTACA--TTTTTTCTT------CTAAAAAGTCACTCCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919660 157 + 163208435 AAACTTCCTTACCTTTGTCTTTAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACGAGAAACTTCCCTGA-G-ATTTTTCTTATGAAAGAAA--------------GAGTATTTGTACA--TTTTTTCTT------CTAAAAAGTCACTCCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387034 155 - 74971481 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTCTCTTATGAAAGAGA------------------ATTTGTACATTTTTTTTCTT------CTAAAAAGTCACTCCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099674 155 - 78541002 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTCTCTTATGAAAGAGA------------------ATTTGTACATTTTTTTTCTT------CTAAAAAGTCACTCCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493312 155 + 26466322 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTCTCTTATGAAAGAGA------------------ATTTGTACATTTTTTTTCTT------CTAAAAAGTCACTCCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20819928 154 + 43916225 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTCTCTTATGAAAGAGA------------------ATTTATACA-TTTTTTTCTT------CTAAAAAGTCACTCCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250763 154 + 75399963 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTCTCTTATGAAAGAGA------------------ATTTGTACA-TTATTTTCTT------CTAAAAAGTCACTCCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817680 154 - 7209941 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTCTCTTATGAAAGAAA------------------ATTTGTACA-TTTTTTTCTT------CTAAAAAGTCACTCCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558161 154 + 3907144 AAACTTCCTTACCTTTGTCTTCAGGTGCAGTAAGTGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTATGAAAGAGA------------------ATTTGTACA-TTTTTTTCTT------CTAAAAAGTCACTCCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556459 154 - 44557958 AAACTTCCTTACCTTTGTCTTGAGATATAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTAGGAAAAAAG---------------AGTATT--TACA--TTTTTTCTT------CTAAAAAGTCACTCCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371299 155 + 6628207 AAGCTTCCTTACCTTCGTCTTGAGATACAGTAAATGATCTGCATTTTTGGAGAGTGGAAGAATATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTAGGAAAAAAG---------------AGTACT-GTTTA--TTTTTTCTT------CTAAAAAGTCACTCCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354148 155 - 5917169 AAGCTCCCTTACCTTTGTCTTGAGATACAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTAGGAAAAAAG---------------AGTATT-GTACA--TTTTTTCTT------CTAAAAAGTCACTCCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306739 155 - 10531588 AAACTTCCTTACCTTTGTCTTGAGATACAGTAAATGATCTGCATTTTTAGAGAGTGGAAGAGTATCCCCATTCTTGCCTGAAACAAGAAACTTCCCTGA-G-ATTTTTCTTAGGAAAAAAG---------------AGTATT-GTACA--TTTTTTCTT------CTAAAAAGTCACTCCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54954894 157 + 72247402 AAACGTCCTTACCTTTGTCTTGAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGGGTATCCCCATTCTTGCCTGAAACAAAAAACTTTCCTTA-G-TGTTTTCTTATCAAAGAAA--------------GATTATTTGCACA--TTTTTTCTT------GTAAAAAGTCACTCCT i micMur3.chr20 I 36 C 0 s proCoq1.NW_012152729v1 2962637 157 + 9850184 AAACGTCCTTACCTTTGTCTTGAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGGGTATCCCCATTCTTCCCTGAAACAAGAAACTTCTCTTA-G-TTTTTTCTTATCAAAGAAA--------------GATTATTTGCACA--TTTTTTCTT------CTACAAAGTCACTCCT i proCoq1.NW_012152729v1 I 424 C 0 s otoGar3.GL873566 13735586 156 + 13852661 AAACTTCCTTACCTTTGTCTTGAGGTGCAGTAAATGATCTGCATTTTTAGAGAGTGGAAGGGTATCCCCATTCTTGCCTGAAACAAGAAATTTTACTAA-T-TTTTTTCTTACTGTAGAAA--------------GATTATTAGCACA--TTTTTTCAT------C-AAAAAGGTACTTCT i otoGar3.GL873566 I 8 I 1757 s mm10.chr8 22490198 152 - 129401213 AGA---CCTCACCTTTGTCTTGAGGTGCAGGAGATGATCTGCGTTTTTAGAGAGTGGAAGAGTATCTCCGTTCTTGCCTAAAGACAGAAAATTCCTTGA-GTTTTTTTCTCACCAAAAAGA--------------CA--AATTCTGCA---TTTTTCCA------CTGTGAAGCCAACTCT i mm10.chr8 C 0 C 0 s canFam3.chr5 80486226 163 + 88915250 AAACTTCCTTACCTTTGTCTTGAGGTGCAGCAAATGATCTGCATTTTTAGAAAGTGGAAGGGTATCCCCATTCTTTCCTGGAACAAGAAATTTCCCTGA-G-GTTTTCCTTCTCAAAGAAA--------------GATCATTTGTACT--TTTTTTTTTTTTTAACTAAAAAGTCACTCCT i canFam3.chr5 I 8 C 0 s dasNov3.JH569970 952811 171 + 1009443 AAACTTCCTTACCTTTGTCTTGAGCTGCAGTAAATGATCTGCATTTTTAGAGAGCGGAAGGATATCCCCATTCTTTCCTGGAACAAGAAATGTCCCTGATG-GTTTTTCTTATCAAAGAAAATATTTCCCCGTAAGTTTACTTGTACG---TTTTTCTT------TTGAAAAGTCACTCCT i dasNov3.JH569970 I 169 C 0 a score=170540.000000 s hg38.chr16_GL383557v1_alt 75509 13 + 89672 TGGAAAAATGGAA s panTro5.chr16 21507015 13 - 81586097 TGGAAAAATGGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568162 13 - 90481686 TGGAAAAATGGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801383 13 + 3010529 TGGAAGAATGGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919817 13 + 163208435 TGGAAGAATGGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387189 13 - 74971481 TGGAAGAATGGAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099829 13 - 78541002 TGGAAGAATGGAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493467 13 + 26466322 TGGAAGAATGGAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820082 13 + 43916225 TGGAAGAATGGAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250917 13 + 75399963 TGGAAGAACGGAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817834 13 - 7209941 TGGAAGAATGGAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558315 13 + 3907144 TGGAAGAATGGAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556613 13 - 44557958 TGGAATAATGGAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371454 13 + 6628207 TAGAAGAATGGAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354303 13 - 5917169 TGGAAGAATGGAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306894 13 - 10531588 TGGAAGAATGGAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54955051 12 + 72247402 TGGTAGAATGGA- i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2962794 12 + 9850184 TGGTAGAATGGA- i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22490350 13 - 129401213 CAGCACCACAGAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80486389 13 + 88915250 GAGTAGAATGGAA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952982 13 + 1009443 GGGTAGAATGAAA i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13735742 1757 + 13852661 I a score=257357.000000 s hg38.chr16_GL383557v1_alt 75522 19 + 89672 TCTCTA-TCAGTGGGAAATC s panTro5.chr16 21507028 19 - 81586097 TCGCTA-TCAGTGGGAAATC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568175 19 - 90481686 TCGCTA-TCAGTGGGAAATC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801396 19 + 3010529 TCTCTA-TCAGTGGGAAATC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919830 19 + 163208435 TCTCTA-TCAGTGGGAAATC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387202 19 - 74971481 TCTCTA-TCCGGGAGAAATC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099842 19 - 78541002 TCTCTA-TCCGGGAGAAATC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493480 19 + 26466322 TCTCTA-TCCGGGAGAAATC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820095 19 + 43916225 TCTCTA-TCCGGGAGAAATC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250930 19 + 75399963 TCTCTA-TCCGTGAGAAATC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817847 19 - 7209941 TCTCTA-TCCGGGAGAAATC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558328 19 + 3907144 TCTCTA-TCAGTGGGAAATC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556626 19 - 44557958 TCTCTA-TCAGTGGGAAATC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371467 19 + 6628207 TCTCTG-GCAGTGGGAAATC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354316 19 - 5917169 TCTCTA-GCAGTGGAAATTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306907 19 - 10531588 TCTCTA-TCAATGGGAAATC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54955063 20 + 72247402 TCTCTACCCAGTGGGAAATC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2962806 19 + 9850184 TCTCTA-CCAGTGGGAAATC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13737499 18 + 13852661 tcTCTA-CCAGT-GGAAATC i otoGar3.GL873566 I 1757 C 0 s mm10.chr8 22490363 19 - 129401213 CTCCTT-CCCGTGGGCAACC i mm10.chr8 C 0 I 1678 s canFam3.chr5 80486402 20 + 88915250 TCGCTAACCACTAGGAAATC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 952995 19 + 1009443 TCTCTA-CCAGTGAGATATA i dasNov3.JH569970 C 0 C 0 a score=75933.000000 s hg38.chr16_GL383557v1_alt 75541 18 + 89672 AG---AAAAAT----------ACAAGCTCAC s panTro5.chr16 21507047 18 - 81586097 AG---AAAAAT----------GCAAGCTCAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568194 18 - 90481686 AG---AAAAAT----------GCAAGCTCAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801415 18 + 3010529 AG---AAAAAT----------GCAAGCTCAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919849 18 + 163208435 AG---AAAAAT----------GCAAGCTCAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387221 8 - 74971481 AG---AAAAAT-------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099861 8 - 78541002 AG---AAAAAT-------------------- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493499 8 + 26466322 AG---AAAAAT-------------------- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820114 8 + 43916225 AG---AAAAAT-------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58250949 18 + 75399963 AG---AAAAATGTAAGCTCAC---------- i chlSab2.chr5 C 0 I 308 s manLeu1.NW_012101698v1 6817866 8 - 7209941 AG---AAAAAT-------------------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558347 8 + 3907144 AG---AAAAAT-------------------- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556645 18 - 44557958 AG---AAAAAT----------GCAAGCTTAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371486 18 + 6628207 AG---AAAAAT----------GTAAGCTTAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354335 18 - 5917169 AG---AAAAAT----------GTAAGCTTAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306926 18 - 10531588 AG---AAAAAT----------GTAAGCTTAC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54955083 15 + 72247402 AG---AAAAAT-------------GGCTTTA i micMur3.chr20 C 0 I 1 s proCoq1.NW_012152729v1 2962825 15 + 9850184 AG---AAAAAT-------------GGCTTTA i proCoq1.NW_012152729v1 C 0 I 1 s otoGar3.GL873566 13737517 18 + 13852661 AGAAAAAAAAT-------------GGCTTGG i otoGar3.GL873566 C 0 I 1 s canFam3.chr5 80486422 15 + 88915250 AG---AAAAAT-------------GTCTGAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953014 8 + 1009443 AG---AAAAAT-------------------- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22490382 1678 - 129401213 I a score=5248.000000 s hg38.chr16_GL383557v1_alt 75559 4 + 89672 TGAG-- s panTro5.chr16 21507065 4 - 81586097 TGAG-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568212 4 - 90481686 TGAG-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801433 4 + 3010529 TGAG-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919867 4 + 163208435 TGAG-- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387229 1 - 74971481 ---G-- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099869 1 - 78541002 ---G-- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493507 1 + 26466322 ---G-- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820122 1 + 43916225 ---G-- i cerAty1.NW_011999143v1 C 0 C 0 s manLeu1.NW_012101698v1 6817874 1 - 7209941 ---G-- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558355 1 + 3907144 ---G-- i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54955099 4 + 72247402 TTAG-- i micMur3.chr20 I 1 C 0 s proCoq1.NW_012152729v1 2962841 4 + 9850184 TTAG-- i proCoq1.NW_012152729v1 I 1 C 0 s otoGar3.GL873566 13737536 4 + 13852661 TTAG-- i otoGar3.GL873566 I 1 C 0 s canFam3.chr5 80486437 4 + 88915250 TTAG-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953022 3 + 1009443 ---GTC i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22490382 1678 - 129401213 I e aotNan1.NW_018500622v1 9306944 0 - 10531588 C e cebCap1.NW_016107433v1 3354353 0 - 5917169 C e chlSab2.chr5 58250967 308 + 75399963 I e saiBol1.JH378225 6371504 0 + 6628207 C e calJac3.chr20 21556663 0 - 44557958 C a score=1024663.000000 s hg38.chr16_GL383557v1_alt 75563 84 + 89672 TAAGCTCACAATTTT-TGAGG--------------GGTATATGAAGA--GAAAGCAG-TGAGTACTTCTTTTGCTTCTAT-------------------CCTCT----GATACATCACTAATTCC s panTro5.chr16 21507069 84 - 81586097 TAAGCTCATAATTTT-TGAGG--------------GGTATATGAAGA--GAAAGCAG-TGAGTACTTCCTTTGCTTCTAT-------------------CCTCT----GATACATCACTAATTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568216 84 - 90481686 TAAGCTCATAATTTT-TGAGG--------------GGTATATGAAGA--GAAAGCAG-TGAGTACTTCCTTTGCTTCTAT-------------------CCTCT----GATACATCACTAATTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801437 85 + 3010529 TAAGCTCACAATTTT-TGAGG--------------GGTATATGAAGA-GGAAAGCAG-TGAGTACTTCCTTTGCTTCTAT-------------------CCTCT----GATACATCACTAATTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919871 85 + 163208435 TAAGCTCACAATTTT-TGAGG--------------GGTATATGAAGA-GGAAAGCAG-TGAGTACTTCCTTTGCTTCTAT-------------------CCTCT----GATACATCACTAATTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387230 84 - 74971481 TAAGCTCACAACTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099870 84 - 78541002 TAAGCTCACAACTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493508 84 + 26466322 TAAGCTCACAACTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820123 84 + 43916225 TAAGCTCACAACTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251275 84 + 75399963 TAAGCTCACAACTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i chlSab2.chr5 I 308 C 0 s manLeu1.NW_012101698v1 6817875 84 - 7209941 TAAGCTCACAACTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558356 84 + 3907144 TAAGCTCACAATTTT-TGAGG--------------TGTATATGAAGA-GGAAAACAG-TGAGTACTTCCTTTGCTTCTA--------------------CCTCT----GATACATCACTAATTCC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556663 70 - 44557958 TAAGCTCACA--TTA-TGAGG---------------GTATATGAA--------------GAGTACTTCCTTTGCTTCTAG-------------------CCTCT----AACACATCACTAACTCC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371504 82 + 6628207 TAAGCTCACAATTTA-TGAGG---------------GTATATGAAGA-GGAAAACAA-TGAGTACTTCCTTGGCTTCTAT-------------------C--CT----GACACATCACTAACTCC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354353 84 - 5917169 TAAGCTCACAATTTA-TGAGA---------------GTATATGAAGA-GGAAAACAA-TGAGTACTTCCTTTGCTTCTAT-------------------CCTCT----GACACATCACTAACTCC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9306944 84 - 10531588 TAAGCTCACAATTTA-TGAGG---------------GTATGTGAAGA-GGAAAACAA-TGAGCACTTCCTTTGCTTCTAG-------------------CCTCT----GACACATCACTAATTCC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54955103 86 + 72247402 AAAGCTCACAATTTT-TGAGG-------------GGGTATATGAAGA-GAAAAGCAG-TGAGTACTTCCTTAGCTTCTAT-------------------CCTAC----GATATATCATGAATTCT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2962845 86 + 9850184 AAAGCTCACAATTTT-TGAGG-------------AGGTATATGAAGA-GGAAAGCAG-TGAATACTTCCTTCACTTCTGT-------------------CCTAC----GATACATCACGAATTCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13737540 65 + 13852661 TAAGCTCCCA----------------------------ATACGAAAA-GGAAAGCAGCTGAGTACTTCCTTCACTTCTAG-------------------CTTAT----GAAAGATCA-------- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486441 108 + 88915250 TAAACCCACAGTTTT-CTGGG--------------CTTATAGGAGGC-AGAAAGCAC-TGAGTACTTTCTTAGCTTCTATTTGGGTGCCTTGGATGTGGCCTATGGTAGGTATATCATTAATTCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953025 120 + 1009443 TAAAGTCAGAATTTTCTGAGGGTGGAAGAGAAGGGGGTGGGTGAAAAAAGATACCAG-TGAGCACTTCTTTAGCTTCTATTTGAATGTTGTGGATATGGCCTGT----GATAGTTCATGAGTTCT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22490382 1678 - 129401213 I a score=1916261.000000 s hg38.chr16_GL383557v1_alt 75647 141 + 89672 CTGAAGCTCTAGTCCATAGCCAGGGACACA-GGT----------GGAGTTTGTGTGGCCT------CGATTTTA--------------------------------------------ATCCACTGC-AAATGAGAGGACTCAAACATTTCCTTAATAAGT----CAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA s panTro5.chr16 21507153 141 - 81586097 CTGAAGCTCTACTCCATAGCCAGGGACACA-GGT----------GGAGTTTGTGTGGCCT------CGATTTTA--------------------------------------------ATCCACTGC-AAATGAGAGGACTCAAACATTTCCTTAATAAGT----CAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568300 141 - 90481686 CTGAAGCTGTACTCCATAGCCAGGGACACA-GGT----------GGAGTTTGTGTGGCCT------CGATTTTA--------------------------------------------ATCCACTGC-AAATGAGAGGACTCAAACATTTCCTTAATAAGT----CAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801522 141 + 3010529 CTGAAGCTCTAGTCCATAGCCAGGCACACA-GGT----------GGAGTTTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAATGAGAGGACTCAAACATTTCCTTAATAAGT----CAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53919956 141 + 163208435 CTGAAGCTCTAGTCCATAGCCAGGCATGCA-GGT----------GGAGTTTGTGTGGCCT------CGATTTTA--------------------------------------------ATCCACTGC-AAACGAGAGAACTCAAACATTTCCTTAATAAGT----CAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387314 145 - 74971481 CTGAAGCTCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTCTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGAGGACTCACACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGCCACTCCAATAAGATCCATGTGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21099954 145 - 78541002 CTGAAGCTCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTCTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGAGGACTCACACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGCCACTCCAATAAGATCCATGTGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493592 145 + 26466322 CTGAAGCTCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTCTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGAGGACTCACACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGCCACTCCAATAAGATCCATGTGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820207 145 + 43916225 CTGAAGCGCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTCTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGAGGACTCACACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251359 145 + 75399963 CTGAAGCTCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTTTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGAGGACTCAAACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6817959 145 - 7209941 CTGAAGCTCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTCTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGAGGACTCACACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558440 145 + 3907144 CTGAAGCTCTATTCCATAGCCAGGCACGCA-GGT----------GGAGTTTGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAAAGAGATGACTCAAACATTTCCTTAATAGGTCACACAAAAAGGCCACT-AGGCTGTCACTCCAATAAGATCCATGTGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556733 143 - 44557958 CTGAAGCTCTACTCCATAGCCTGGCATGTA-GGT----------GGAGTATGCGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGA-AAACGAGAGGACT--AACATTTCCTTAATAGGTCACAGAAAAAAGCCACT-AGGCTGTCACTCTGATAAGATTCGTGTGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371586 143 + 6628207 CTGAAGCTCTACTCCATAGCCAGGCATGCA-GGT----------GGAGTATGCGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAACAAGAGGACC--AGCATTTCCTTAATAGGTCACAGAAAAAAGCCACT-AGGCTGTCACTCTGATAAGATTCGTGTGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354437 143 - 5917169 CTGAAGCTCTATTCCATAGCCAGGCATGCA-GGT----------GGAGTATGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAATGAGACGACT--AATATTTCCTTAATAGGTCACAGAAAAAAGCCACT-AGGCTGTCACTCTGATAAGATTCGTGTGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307028 143 - 10531588 CTGAAGCTCTACTCCATAGCCAGGCATGCA-GGT----------GGAGTATGTGTGGCCT------CAATTTTA--------------------------------------------ATCCACTGC-AAATGAGAGGACT--AATATTTCCTTAATAGGTCACAGAAAAAAGCCACT-AGGCTGTCACTCTGATAAGATTCGTGTGA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54955189 151 + 72247402 CTGAAGCTCTACCCCACAGCCAGGCATGCA-GGTGGGTGGAA--AGAGTTTGCATGGCCT------CTATTTTA--------------------------------------------TTCCACTAC-AAACAAGAGGACACAAACATTTCCTTAATAGGTCACAT-AAAATGCCACT-AGGCTGTCATTC-AGTAAGATTCATGTGA i micMur3.chr20 C 0 I 1519 s proCoq1.NW_012152729v1 2962931 153 + 9850184 CTGAGGCTCTACTCCACAGCCAGGCATGCA-GGTGGGTGGAAATAGAGTTTGTATGGTCT------CAATTTTA--------------------------------------------TTCCACTAC-AAACGAGAGGACACAAACATTTCCTTAACAGGTCACAT-AAAATGGCACT-AGGCTATCACTC-AGTAAGATCCATGTGA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13737605 125 + 13852661 ----------------------------CA-GGTGGGTGGAAATGAATTATGTATGGCCT------CACTATTA--------------------------------------------TTCCACTAC-AAACAACAGGACCCAAACATTTCCTTAATAAGTCACAC-AAAATGCCACT-AGGCTGTCACTC-AGTAAGATCCATGTGA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22492060 98 - 129401213 CTGAAGCCCCACTCCACAGACATGCAGGGATGGA----------GGAGCA-----------------GATTTCA--------------------------------------------ATACATTCT-AAGGAAGAGAATTCA------CTCTTAA-------------------ACT-AGACT----------CAGAGTCCGTGG-- i mm10.chr8 I 1678 C 0 s canFam3.chr5 80486549 197 + 88915250 CTGAAGCTACAACCCACAGCCAGGCATGCA-GGTAGGTGGAAGTGGGGTTTGTGTGGCTTTGACTACAACTTCA---------TTTGCTCATTTTGGAATCTAAAGCAAAAACCTCTCACCTACTATAAAACAACAGAGCCCAAACACTTCCAGAACAGGTCATAC-ACAAGGCCACTAAGGCTATCACCCTAGTAAGATCAACGTGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953145 193 + 1009443 CTGAAGTGCTACTTCCCAGTCAGGCAAGCA-AAT----GGAAATAGAGGTTAGGTGGCCC------TGATTTCAAATTCATTTTCTCCTCATTCTAGAACCTAAAGCAAAAATCTCTAATCCACCAT-TAACAATGGGATCCAAATATTTCCTTAGCAGATCATAA-AAAAGGTCTCT-AGGCTGTTACCC-GGTAATATCTATGCAA i dasNov3.JH569970 C 0 C 0 a score=157455.000000 s hg38.chr16_GL383557v1_alt 75788 11 + 89672 TCTTCTTTTTC s panTro5.chr16 21507294 11 - 81586097 TCCTCTTTTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568441 11 - 90481686 TCTTCTTTTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801663 11 + 3010529 TCTTCTTTTTC i gorGor5.CYUI01000018v1 C 0 I 1 s nomLeu3.chr2 53920097 11 + 163208435 TCTTCTTTTTC i nomLeu3.chr2 C 0 I 1 s rheMac8.chr20 21387459 11 - 74971481 TCTTCTTTTTC i rheMac8.chr20 C 0 I 1 s macFas5.chr20 21100099 11 - 78541002 TCTTCTTTTTC i macFas5.chr20 C 0 I 1 s macNem1.NW_012011355v1 14493737 11 + 26466322 TCTTCTTTTTC i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20820352 11 + 43916225 TCTTCTTTTTC i cerAty1.NW_011999143v1 C 0 I 1 s chlSab2.chr5 58251504 11 + 75399963 TATTCTTTTTC i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6818104 11 - 7209941 TCTTCTTTTTC i manLeu1.NW_012101698v1 C 0 I 1 s colAng1.NW_012123265v1 558585 11 + 3907144 TCTTCTTTTTC i colAng1.NW_012123265v1 C 0 I 1 s calJac3.chr20 21556876 11 - 44557958 CCTTCTTTTTC i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6371729 11 + 6628207 CCTTCTTTTTC i saiBol1.JH378225 C 0 I 1 s cebCap1.NW_016107433v1 3354580 11 - 5917169 CCTTCTTTTTC i cebCap1.NW_016107433v1 C 0 I 1 s aotNan1.NW_018500622v1 9307171 11 - 10531588 CCTTCTTGTTC i aotNan1.NW_018500622v1 C 0 I 1 s proCoq1.NW_012152729v1 2963084 11 + 9850184 CCACCTTTTTC i proCoq1.NW_012152729v1 C 0 I 11 s otoGar3.GL873566 13737730 8 + 13852661 ---CCTTTTTC i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22492158 8 - 129401213 ---CCTGTCTG i mm10.chr8 C 0 I 2 s canFam3.chr5 80486746 11 + 88915250 CCTTCTTTTTC i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 953338 11 + 1009443 CCTTCTTTTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54955340 1519 + 72247402 I a score=99185.000000 s hg38.chr16_GL383557v1_alt 75799 9 + 89672 TACA----------GGATT s panTro5.chr16 21507305 9 - 81586097 TACA----------GGATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568452 9 - 90481686 TACA----------GGATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801675 9 + 3010529 TACA----------GGATT i gorGor5.CYUI01000018v1 I 1 C 0 s nomLeu3.chr2 53920109 9 + 163208435 TACA----------GGATT i nomLeu3.chr2 I 1 C 0 s rheMac8.chr20 21387471 9 - 74971481 TACA----------GGATC i rheMac8.chr20 I 1 C 0 s macFas5.chr20 21100111 9 - 78541002 TACA----------GGATC i macFas5.chr20 I 1 C 0 s macNem1.NW_012011355v1 14493749 9 + 26466322 TACA----------GGATC i macNem1.NW_012011355v1 I 1 C 0 s cerAty1.NW_011999143v1 20820364 9 + 43916225 TACA----------GGATC i cerAty1.NW_011999143v1 I 1 C 0 s chlSab2.chr5 58251516 9 + 75399963 TACA----------GGATC i chlSab2.chr5 I 1 C 0 s manLeu1.NW_012101698v1 6818116 9 - 7209941 TACA----------GGATC i manLeu1.NW_012101698v1 I 1 C 0 s colAng1.NW_012123265v1 558597 9 + 3907144 TACA----------GGATC i colAng1.NW_012123265v1 I 1 C 0 s calJac3.chr20 21556888 9 - 44557958 TACA----------GGATC i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6371741 19 + 6628207 TACATTACTGAAATGGATC i saiBol1.JH378225 I 1 C 0 s cebCap1.NW_016107433v1 3354592 9 - 5917169 TACA----------GGATC i cebCap1.NW_016107433v1 I 1 C 0 s aotNan1.NW_018500622v1 9307183 9 - 10531588 TACA----------GGATC i aotNan1.NW_018500622v1 I 1 C 0 s otoGar3.GL873566 13737739 9 + 13852661 TGCA----------GAATC i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22492168 9 - 129401213 CGCA----------GGACT i mm10.chr8 I 2 C 0 s canFam3.chr5 80486759 9 + 88915250 TGTA----------GGACT i canFam3.chr5 I 2 C 0 s dasNov3.JH569970 953349 4 + 1009443 CACA--------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54955340 1519 + 72247402 I e proCoq1.NW_012152729v1 2963095 11 + 9850184 I a score=792180.000000 s hg38.chr16_GL383557v1_alt 75808 95 + 89672 ATCATTACCCATCATTAAATCTTG-TTGTTTTTCAACAGCCTGTTTTCACCTCAGTTAAGCTAGCGCAAACTACGATTCTTCAACCCTTACCTTGA s panTro5.chr16 21507314 95 - 81586097 ATCATTACCCATCATTAAATCTTG-TTGTTTTTCAACAGCCTGTTTTCACCTCAGTTAAGCTAGCGCAAACTACGATTCTTCAACCCTTACCTTGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568461 95 - 90481686 ATCATTACCCATCATTAAATCTTG-TTGTTTTTCAACAGCCTGTTTTCACCTCAGTTAAGCTAGCGCAAACTACGATTCTTCAACCCTTACCTTGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801684 95 + 3010529 ATTATTACCCATCATTAAATCTTG-TTGTTTTTCAACAGCCTGTTTTCACCTCAGTTAAGCTAGCGCAAACTACGATTCTTCAACCCTCACCTTGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920118 92 + 163208435 ATCATTACCCATCATTAAATC----TTGTTTTTCAACAGTCTGTTTTCACCTCAGTTAAGCTAGTGCAAACTACGATTCTTCAACCCTCGCCTTGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387480 57 - 74971481 ATCATTACCCACCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCTTCTCAGTT--------------------------------------A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100120 57 - 78541002 ATCATTACCCATCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCTTCTCAGTT--------------------------------------A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493758 57 + 26466322 ATCATTACCCATCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCTTCTCAGTT--------------------------------------A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820373 57 + 43916225 ATCATAACCCATCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCTTCTCAGTT--------------------------------------A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251525 57 + 75399963 ATCATTACCCATCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCATCTCAGTT--------------------------------------A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818125 57 - 7209941 ATCATTACCCATCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCTTCTCAGTT--------------------------------------A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558606 57 + 3907144 ATCATTACCCATCATTAAATCTTG-TTATTTTCCAACAGCCTGTTTTCATCTCAGTT--------------------------------------A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556897 95 - 44557958 ATTACTACCCATCATTAAATCTTG-TTATTTTTCAACAGCCTGTTTTCTTCTCAGTCAAGCTAGGGCAAATAACGATTCTTCAATCCTTACCTTGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371760 96 + 6628207 ATTACTATCCATCATTAAATCTTGCTTATTTTTCAACAGCCTGTTTTCTTCTCAGTCAAGCTAGGGCAAATAACGATTCTCCAATTCTCACCTTGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354601 95 - 5917169 ATTACTACCCATCATTAAATCTTG-TTATTTTTCAACAGCCTGTTTTCTTCTCAGTCAAGCGAGGGCAAATAACGATTCTCCGATTCTCACCTTGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307192 95 - 10531588 ATTACTACTCATCATTAAATCTTG-TTATTTTTCAACAGCCTGTTTTCTTCTCAGTCAAGCTAGGGCAAATAACGATTCTCCAATCCTCACCTTGA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2963106 95 + 9850184 ATCACTACCCATCATTAAATCTCG-TCGCTTTTCAACAGCCTGTTTTCCTCTCAGCCAAGCTAGGGCAAGCTATGATTCTTCAACCCTCACCTCAC i proCoq1.NW_012152729v1 I 11 C 0 s otoGar3.GL873566 13737748 95 + 13852661 ATCACCACCCATCATCAAATCTTG-TCACTTTTCAAAAGCCTATTTTCATCACAGCCAACCTAGGTCAAATTATGATTCTTCATCCCTCACCTTAA i otoGar3.GL873566 C 0 T 1668 s mm10.chr8 22492177 95 - 129401213 GCCTCTGCACAGCCTTCTACCTTC-TCAGTTCTCAACAGCCTGCTTCTATATCCAGCAGGCCAGGGCAAAGCCTGACTCCGTAGCTGTCAGCTCAA i mm10.chr8 C 0 C 0 s canFam3.chr5 80486768 92 + 88915250 GTCACTCCCCAACATTAACCCTTA-TCATATT-CAGCAGCTTGTTTTGATCCCAGTCAAGATGGGGCAAACT--GATTCTATAACCTTTACCTCCA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953353 62 + 1009443 --------------TTAAAGCATG-CCAGTTTTCAAAAGCCTGTTATC-TCCCAGTCAAGCTAGAAAAAAC--CGATTCT---------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54955340 1519 + 72247402 I a score=60768.000000 s hg38.chr16_GL383557v1_alt 75903 4 + 89672 CTAC s panTro5.chr16 21507409 4 - 81586097 CTAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568556 4 - 90481686 CTAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801779 4 + 3010529 CTAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920210 4 + 163208435 CTAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387537 4 - 74971481 CTAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100177 4 - 78541002 CTAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493815 4 + 26466322 CTAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820430 4 + 43916225 CTAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251582 4 + 75399963 CTAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818182 4 - 7209941 CTAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558663 4 + 3907144 CTAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556992 4 - 44557958 CTAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371856 4 + 6628207 CTAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354696 4 - 5917169 CTAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307287 4 - 10531588 CTAC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2963201 4 + 9850184 CTAC i proCoq1.NW_012152729v1 C 0 C 0 s mm10.chr8 22492272 4 - 129401213 TCAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80486860 4 + 88915250 CTAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953415 2 + 1009443 --AC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54955340 1519 + 72247402 I e otoGar3.GL873566 13737843 1668 + 13852661 T a score=300169.000000 s hg38.chr16_GL383557v1_alt 75907 24 + 89672 ACCCTGCAGCGCACCACCTAGAGC s panTro5.chr16 21507413 24 - 81586097 ACCCTGCAGCGCACCACCTAGAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568560 24 - 90481686 ACCCTGCAGCGCACCACCTAGAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801783 24 + 3010529 ACCCTGCAGCGCACCACCTAGAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920214 24 + 163208435 ACCCTGCAGCGCACCACCTAGAGC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387541 24 - 74971481 ACCCTGCAGCGCACCACCACAAGC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100181 24 - 78541002 ACCCTGCAGCGCACCACCACAAGC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493819 24 + 26466322 ACCCTGCAGCGCACCACCACAAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820434 24 + 43916225 ACCCTGCAGCGCACTACCTAGAGC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251586 24 + 75399963 ACCCTGCGGCGCACCACCTAGAGC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818186 24 - 7209941 ACCCTGCAGCGCACTACCTAGAGC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558667 24 + 3907144 ACCCTGCAGCGCACCACCTAGAGC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21556996 24 - 44557958 ACCCTGCAGCACACCACGAAGAGC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371860 24 + 6628207 ATCCTGCAGCACACCACCAAGAGC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354700 24 - 5917169 ACCCTGCAGCACACCACCAAGAGC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307291 24 - 10531588 ACCCCACAGCACACCACCAACAGC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2963205 24 + 9850184 ATCCTGCAGGACACCACATAGAAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736175 24 + 13852661 ATCCTGCAGGGTACCACACAGAAT i otoGar3.GL873566 T 1668 C 0 s mm10.chr8 22492276 23 - 129401213 CTCTTGCA-TGCATCTTACAGAAG i mm10.chr8 C 0 C 0 s canFam3.chr5 80486864 24 + 88915250 GCCTTACAGTGTACCTTATAGAAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953417 24 + 1009443 ACCCTGCAGTGTACAACACAGAAT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54955340 1519 + 72247402 I a score=160529.000000 s hg38.chr16_GL383557v1_alt 75931 10 + 89672 -------------CATAAACTTT s panTro5.chr16 21507437 10 - 81586097 -------------CATAAACTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568584 10 - 90481686 -------------CATAAACTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801807 10 + 3010529 -------------CATAAACTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920238 10 + 163208435 -------------CATAAACTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387565 10 - 74971481 -------------CATAAACCTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100205 10 - 78541002 -------------CATAAACCTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493843 10 + 26466322 -------------CATAAACCTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820458 10 + 43916225 -------------CATAAACCTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251610 10 + 75399963 -------------CATAAACCTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818210 10 - 7209941 -------------CATAAACCTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558691 10 + 3907144 -------------CATAAACCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557020 10 - 44557958 -------------CATAAACTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371884 10 + 6628207 -------------CATAAACTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354724 10 - 5917169 -------------CATAAACTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307315 10 - 10531588 -------------CATAAACTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54956859 10 + 72247402 -------------CATAAACTTT i micMur3.chr20 I 1519 C 0 s proCoq1.NW_012152729v1 2963229 10 + 9850184 -------------CTTAAACTTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736199 10 + 13852661 -------------CTAAAACTTT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22492299 10 - 129401213 -------------CCTAAGCCCT i mm10.chr8 C 0 I 269 s canFam3.chr5 80486888 10 + 88915250 -------------CATCAACTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953441 23 + 1009443 CTAAACTTTTAAATCTAAACTTT i dasNov3.JH569970 C 0 C 0 a score=365248.000000 s hg38.chr16_GL383557v1_alt 75941 24 + 89672 TAAGAGATGATCCAATATCCTGCT s panTro5.chr16 21507447 24 - 81586097 TAAGAGATGATCCAATATCCTGCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568594 24 - 90481686 TAAGAGATGATCCAATATCCTGCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801817 24 + 3010529 TAAAAGACGATCCAATATCCTGCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920248 24 + 163208435 TAAGAGATGACTCAATATCCTGCT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387575 24 - 74971481 TAAGAGATGATTCAATATCCTACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100215 24 - 78541002 TAAGAGATGATTCAATATCCTACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493853 24 + 26466322 TAAGAGATGATTCAATATCCTACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820468 24 + 43916225 TAAGAGATGATTCAATATCCTACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251620 24 + 75399963 TAAGAGATGATTCAATATCCTACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818220 24 - 7209941 TAAGAGATGATTCAATATCCTACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 558701 24 + 3907144 TAAGAGATGATTCAATATCCTACT i colAng1.NW_012123265v1 C 0 I 295 s calJac3.chr20 21557030 24 - 44557958 TAAGAGATGATTCAATACCCTGCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6371894 24 + 6628207 TAAGAGATGATCCAATAACCTGCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354734 24 - 5917169 TAAGAGATGATCCAATATCCTGCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307325 24 - 10531588 TAAGAGATGATCCAGTATCCTGCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54956869 24 + 72247402 TACAAGATGATCCAGTATCCTGCT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963239 24 + 9850184 TACGAGATGATCCAGTATCCTGCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736209 24 + 13852661 AATGAGATGATCCAGTATCTTGCG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486898 23 + 88915250 TAACATA-GAATCATTATCCTGCT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953464 24 + 1009443 TAAAAGATGATACAGTATCTTGCT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22492309 269 - 129401213 I a score=275285.000000 s hg38.chr16_GL383557v1_alt 75965 19 + 89672 AAAGATTCTAATACTCTAA s panTro5.chr16 21507471 19 - 81586097 AAAGATTCTAATACTCTAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568618 19 - 90481686 AAAGATTCTAATACTCTAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801841 19 + 3010529 AAAGATTCTAATACTCTAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920272 19 + 163208435 AAAGATTCTAATACTCTAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387599 19 - 74971481 AAAGATTCTAATACTCTAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100239 19 - 78541002 AAAGATTCTAATACTCTAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493877 19 + 26466322 AAAGATTCTAATACTCTAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820492 19 + 43916225 AAAGATTCTAATACTCTAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251644 19 + 75399963 AAAGATTCTAATACTCTAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818244 19 - 7209941 AAAGATTCTAATACTCTAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559020 19 + 3907144 aaaGATTCTAATACTCTAA i colAng1.NW_012123265v1 I 295 C 0 s calJac3.chr20 21557054 12 - 44557958 AAAGATTCTAAT------- i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6371918 19 + 6628207 AAAGATTCTAATACTCTAA i saiBol1.JH378225 C 0 I 3 s cebCap1.NW_016107433v1 3354758 19 - 5917169 AGAGATTCTAATACTCTAA i cebCap1.NW_016107433v1 C 0 I 10 s aotNan1.NW_018500622v1 9307349 19 - 10531588 AAAGATTCTAATACTCTAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54956893 19 + 72247402 AAAGATTCTAACACTCTAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963263 19 + 9850184 AAAGATTCTAACACTCTAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736233 19 + 13852661 AAAGATTCTAGTATTACAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486921 17 + 88915250 AATGATTCTAACACTGA-- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953488 15 + 1009443 AAAGCATCTAACACT---- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22492309 269 - 129401213 I a score=12376.000000 s hg38.chr16_GL383557v1_alt 75984 1 + 89672 A s panTro5.chr16 21507490 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568637 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801860 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920291 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387618 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100258 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493896 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820511 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251663 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818263 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559039 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s aotNan1.NW_018500622v1 9307368 1 - 10531588 A i aotNan1.NW_018500622v1 C 0 I 9 s micMur3.chr20 54956912 1 + 72247402 A i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963282 1 + 9850184 A i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736252 1 + 13852661 A i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486938 1 + 88915250 A i canFam3.chr5 C 0 C 0 e mm10.chr8 22492309 269 - 129401213 I e dasNov3.JH569970 953503 0 + 1009443 C e cebCap1.NW_016107433v1 3354777 10 - 5917169 I e saiBol1.JH378225 6371937 3 + 6628207 I e calJac3.chr20 21557066 2 - 44557958 I a score=30095.000000 s hg38.chr16_GL383557v1_alt 75985 4 + 89672 CAGC s panTro5.chr16 21507491 4 - 81586097 CAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568638 4 - 90481686 CAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801861 4 + 3010529 CAGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920292 4 + 163208435 CAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387619 4 - 74971481 TAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100259 4 - 78541002 TAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493897 4 + 26466322 TAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820512 4 + 43916225 TAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251664 4 + 75399963 TAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818264 4 - 7209941 TAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559040 4 + 3907144 TAAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557068 4 - 44557958 CAGA i calJac3.chr20 I 2 I 3 s saiBol1.JH378225 6371940 4 + 6628207 TAGA i saiBol1.JH378225 I 3 I 3 s micMur3.chr20 54956913 4 + 72247402 TAAC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963283 4 + 9850184 TAAC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736253 4 + 13852661 TAAC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486939 4 + 88915250 GAAC i canFam3.chr5 C 0 C 0 e mm10.chr8 22492309 269 - 129401213 I e dasNov3.JH569970 953503 0 + 1009443 C e aotNan1.NW_018500622v1 9307369 9 - 10531588 I e cebCap1.NW_016107433v1 3354777 10 - 5917169 I a score=905796.000000 s hg38.chr16_GL383557v1_alt 75989 65 + 89672 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAGTCTACTTCAGT s panTro5.chr16 21507495 65 - 81586097 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAGTCTACTTCAGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568642 65 - 90481686 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAGTCTACTTCAGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801865 65 + 3010529 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAACGTCTACTTCAGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920296 65 + 163208435 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAGTCTACTTCAGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387623 65 - 74971481 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAT--AAAAGTCTACTTCAGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100263 65 - 78541002 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAT--AAAAGTCTACTTCAGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493901 65 + 26466322 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAT--AAAAGTCTACTTCAGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820516 65 + 43916225 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAT--AAAAGTCTACTTCAGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251668 65 + 75399963 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAC--AAAAGTCTACTTCAGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818268 65 - 7209941 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAT--AAAAGTCTACTTCAGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559044 65 + 3907144 TTATTTGCTTTATCTAATGGGTGGGTAAACCATTAGTTAAAATGGACAC--AAAAGTCTACTTCAGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557075 65 - 44557958 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAATCTACTTCAGT i calJac3.chr20 I 3 C 0 s saiBol1.JH378225 6371947 65 + 6628207 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAATCGACTTCAGT i saiBol1.JH378225 I 3 C 0 s cebCap1.NW_016107433v1 3354787 65 - 5917169 TTATTTGCTTTATCTAATGGGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAATCTACTTCAGC i cebCap1.NW_016107433v1 I 10 C 0 s aotNan1.NW_018500622v1 9307378 65 - 10531588 TTATTTGCTTTATCTAATGAGTGGGAAAACCATTAGTTAAAATGGACAC--AAAAATCTACTTCAGT i aotNan1.NW_018500622v1 I 9 C 0 s micMur3.chr20 54956917 67 + 72247402 TTGTTTGCTTTATCTAGTGGGTGGGAAAACTGTAAGTTACAATGGACACAGAAAAATCTACTACAAT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963287 67 + 9850184 TTGTTTGCTTTAGCTAGTGGGTAGGAAAACTGTAAGTTACAATGGACACAGAAAAATCTACTTTGAT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736257 46 + 13852661 TTGTTTGTTTTACCTAGTGGGTGGGAAAACCATAAGT---------------------TACTTTAAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80486943 51 + 88915250 TCTTTTGCTCTGC----------------CCATAAGCTGCCAAAGACACAGAAAAATCTACTTCCAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953503 54 + 1009443 ---------TTATCTAGTTGGTGAAAAATACATAACTTACAAC--ACAG--AAAAACCTACTTCCAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22492309 269 - 129401213 I a score=84084.000000 s hg38.chr16_GL383557v1_alt 76054 4 + 89672 TTTT s panTro5.chr16 21507560 4 - 81586097 TTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568707 4 - 90481686 TTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801930 4 + 3010529 TTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920361 4 + 163208435 TTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387688 4 - 74971481 TTTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100328 4 - 78541002 TTTT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493966 4 + 26466322 TTTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820581 4 + 43916225 TTTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251733 4 + 75399963 TTTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818333 4 - 7209941 TTTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559109 4 + 3907144 TTTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557140 4 - 44557958 TTTT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372012 4 + 6628207 TTTT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354852 4 - 5917169 TTTT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307443 4 - 10531588 TTTT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54956984 4 + 72247402 TTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963354 4 + 9850184 TTTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736303 4 + 13852661 TTTT i otoGar3.GL873566 C 0 I 567 s mm10.chr8 22492578 4 - 129401213 TTTT i mm10.chr8 I 269 C 0 s canFam3.chr5 80486994 4 + 88915250 TTTT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953557 4 + 1009443 TTTT i dasNov3.JH569970 C 0 C 0 a score=1050530.000000 s hg38.chr16_GL383557v1_alt 76058 60 + 89672 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT s panTro5.chr16 21507564 60 - 81586097 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568711 60 - 90481686 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801934 60 + 3010529 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTTTCCAGTTTTCTTATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920365 60 + 163208435 CTGTAATCAGAATTCCAACTGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387692 60 - 74971481 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100332 60 - 78541002 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14493970 60 + 26466322 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820585 60 + 43916225 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251737 60 + 75399963 CTATAAGCAGAATTCCAACTACAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818337 60 - 7209941 CTATAAGCAGAATTCCAACCGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559113 60 + 3907144 CTATAAGCAGAATTCCAACTGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTCTT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557144 60 - 44557958 CTATAAGCAGAATTCCAACTGCAATTCTGATTTCTGGC-TTCTCTCTCCGGTTTTCTTATG i calJac3.chr20 C 0 I 1 s saiBol1.JH378225 6372016 60 + 6628207 CTATAAGCAGAATTCCAACTGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354856 60 - 5917169 CTATAAGCAGAATCCCAACTGCAATTCTGATTTCTGGC-TTCTCTCTACAGTTTTCTTATT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307447 60 - 10531588 CTATAAGCAGAATTGCAACTGCAATTCTGATTTCTGGC-TTCTCTCTCCAGTTTTCTTATA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54956988 60 + 72247402 CTGTAAGCAGAACTGTAACTACAATTCTGATTTTTGGC-TTCTGTCTCGAGTCTTCTGATT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963358 60 + 9850184 CTGTAAGCAGAACTTTAACTGCAATTCTGATTTTTGGC-TTCTCTCTCCAGTCTTCTGACT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736874 60 + 13852661 cTATAAGCAGAATTTTAACTGCAATTCTGTCTTTTTGC-TTCTCTCTCCAGTCTTCTTACT i otoGar3.GL873566 I 567 C 0 s mm10.chr8 22492582 61 - 129401213 CTACAGGCAGAATTTCAACTGCAATTTTGCTACTTCGCATTCTCTTTCCAGTTTATTTGTT i mm10.chr8 C 0 I 257 s canFam3.chr5 80486998 60 + 88915250 CCACAAGCAAAATTTCAACTGCAATTCTAATTTTCTAC-TTCTCTCTCCAGTTTTCTTATT i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 953561 57 + 1009443 CCACTAGCAGAATT-CAATTGGAATTCTGATATTTGGC---CTCTCTCCAATTTTCACATT i dasNov3.JH569970 C 0 C 0 a score=105022.000000 s hg38.chr16_GL383557v1_alt 76118 12 + 89672 --G-AAAAAAACGTG s panTro5.chr16 21507624 12 - 81586097 --G-AAAAAAACGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568771 12 - 90481686 --G-AAAAAAACGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 801994 12 + 3010529 --G-AAAAAAACGTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920425 12 + 163208435 --G-AAAAAAACGTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387752 12 - 74971481 --G-AAAAAAACGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100392 12 - 78541002 --G-AAAAAAACGTG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494030 12 + 26466322 --G-AAAAAAACGTG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820645 12 + 43916225 --G-AAAAAAACGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251797 12 + 75399963 --G-AAAAAAACGTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818397 12 - 7209941 --G-AAAAAAAGGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559173 12 + 3907144 --G-GAAAAAACGTG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557205 13 - 44557958 --AAAAAAAAACTTG i calJac3.chr20 I 1 C 0 s saiBol1.JH378225 6372076 13 + 6628207 --GCAAAAAAACTTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354916 13 - 5917169 --GAAAAAAAACTTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307507 13 - 10531588 --GAAAAAAAACTTG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957048 12 + 72247402 --G-GGAAAAACTTT i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963418 12 + 9850184 --G-GGAAACATTTT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736934 12 + 13852661 --G-GAAAATACTTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80487059 10 + 88915250 --G-AAAAGTAAA-- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 953618 11 + 1009443 GTG-GAAAAAAC--- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22492643 257 - 129401213 I a score=3772708.000000 s hg38.chr16_GL383557v1_alt 76130 213 + 89672 CTCCCATCTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCTAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAGATGAGACATCGCTATATCCAAGAATCAAGAAGTTAAAAAAATAAGTCAG---GGTCATCTACTGCCTTA-GTACCAGA-TACAGTAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc s panTro5.chr16 21507636 212 - 81586097 CTCCCATCTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCTAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACATCGCTATATCCAAGAATCAAGAAGTT-AAAAAATAAGTCAG---GGTCATCTACTGCCTTA-GTACCAGA-TACAGTAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568783 212 - 90481686 CTCCCATCTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCTAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACATCGCTATATCCAAGAATCAAGAAGTT-AAAAAATAAGTCAG---GGTCATCTACTGCCTTA-GTACCAGA-TACAGTAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802006 212 + 3010529 CTCCCATCTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCTAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACATCGCTATATCCAAGAATCAAGAAGTT-AAAAAATAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGTAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920437 213 + 163208435 CTCCCATCTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAAAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAACTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACG----TTTTTTTACTGCTGAAatc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387764 211 - 74971481 CTCTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAA-TAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100404 211 - 78541002 CTCTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAA-TAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494042 212 + 26466322 CTCTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAGTAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820657 212 + 43916225 CTCTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58251809 213 + 75399963 CTTTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGGATCAAAAAGTTAAAAAAATAAATCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818409 212 - 7209941 CTCTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------TCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559185 212 + 3907144 CTCTCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GGTCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TTTTTTACTGCTGAAatc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557218 213 - 44557958 CTCCCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGAAGAAGCTGCCTCTTTCTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GATCATCTACTGTCTCA-GTAGCAGATTACAGCAGCACCA-------------------------CCTTAG------------------C-------ACG-----TGTTTTACTGCTGAAatc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372089 212 + 6628207 CTCCCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTCTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GATCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTAG------------------C-------ACA-----TGTTTTACTGCTGAAatt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3354929 255 - 5917169 CTCCCATTTTACCTGTTGCAACTGTGGATCCCAGTCTCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGGTGCCTCTTTCTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GATCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCACATGATAAGTCAGGATCATCTACTGCCTCAGTACCAGATACAGCAGCACC-------ACA-----TGTTTTACTGCTGAAatc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307520 212 - 10531588 CTCCCATTTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTCTAGAACAGGAAATGAGACGTCGCTATATCCAAGAATCAAAAAGTT-AAAAAATAAGTCAG---GATCATCTACTGCCTCA-GTACCAGA-TACAGCAGCACCA-------------------------CCTTGG------------------C-------ATA-----TGTTTTACTGCTGAAatc i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957060 218 + 72247402 CTCCCACATTACCTGTTGCAACTGTAGATCCCAGTCTCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTTTTCTTGGAACAGGAAATGAGACGTCGCTGTATTCAAGAATTGAAAAGTT-GAAAA-TAAGCCAG---TGTCACCTATTGCCTCA-GTACTAGA-TATACCAGCAACA-------------------------TTTTAG------------------TACCAGCAACA-----TTTTGTCCTGTTGAAATC i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963430 211 + 9850184 CTCCCACATTACCTGTTGCAACCGTGGATCCCAGTCTCCAGAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTTTTCTTGGAACAGGAAATGAGACGTCGCTGTACCCAAGAATTGAAAAGTT-GAAAA-TAAGCCAG---TGTCATCTATTGCCTCA-GCACTAGA-TACACCAGCAACA-------------------------TCTTAG------------------T-------ACA-----TTTTTTCCTGTTGAAatc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13736946 211 + 13852661 CTCCCACATTACCTGTTGCAACTGTGGATCCTAGTCGCCAAAGCTCCAAGTGATGGGCAAACTGGAAGAGGAGAAGCTGCCTTCTTTTTGAACAGGAAATGAGACGTCGCTATATCCAGGAATTGAAAAGTT-GAAAG-TAAGCCAG---GGTCATTTATTGCCTCA-ATTCTAGA-TACACCAGCAATA-------------------------TCTTAG------------------T-------ACA-----TTTTTTCCTGTTGAAatt i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22492900 214 - 129401213 CTCCAGACATACCTGTTGCAGATGTGGATCCTAGTCTCCACAGTTCCAAGTGATGCGCGAACTGGAAAAGGAGAAGCTGCCTTCTTTTTGAACAGGAAATGAGACGCCGCTGCAGCCAACAATTGAAACGTT-GTAAG-TAGGCCAACCTGGTCATCCACTGCTTTGTTTCCCCGA-TTCAACA-------------------------------TCTTAG------------------C-------ATACCAGCTCCTCTACTGTTGAAACC i mm10.chr8 I 257 I 119 s canFam3.chr5 80487069 209 + 88915250 CTCTCATTGTACCTGTTGCAACTGTAGATCCCAGTCGCCAAAGTTCCAAGTGATGAGTAAACTGGAAAAGGAGAAGCTGCCTCTTTTTTGAACAGGAAATGAGACGTCGCTGTA-CCAAAAATTTAAAAGTG-ATAAA-TAAGCCAA---GGTATTCTATTGCCTCA-GTACTAGA-TACAGTAGCAATA-------------------------CCCTAG------------------C-------ACA-----T-TTTTACTGTTGAAatc i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 953629 207 + 1009443 CTCCCATCTTACCTGTTGCAACTGTGGATCCCAGTCGCCAAAGTTCCAAGTGATGAGCAAACTGGAAGAGGAGAAGCTGCCTCTTTTTAGAACAGGAAATGAGACGTCTCTGTATCCAAGAATGGAAACATT-C-----TTAGCCAG---GGTCATCTATTGCCTCA-GTACTAGA-AACAGCAGCAAAA-------------------------TCTTAG------------------A-------ACA-----TTCTTTACTGTTAAAATC i dasNov3.JH569970 C 0 C 0 a score=1722127.000000 s hg38.chr16_GL383557v1_alt 76343 110 + 89672 catttccttgataaatatttcctaagtactcccatatgccaggcactgccctgagatctatgaagac---gatgatgaat-taaaacatagctactgctctcaacatgct--tcta----- s panTro5.chr16 21507848 110 - 81586097 catttccttgataaatatttcctaagtactcccatatgccaggcactgccctgggatctatgaacac---gatgatgaat-taaaacatagctactgctctcaacatgct--tcta----- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21568995 110 - 90481686 catttccttgataaatatttcctaagtactcccatatgccaggcactgccctgggatctatgaacac---gatgatgaat-taaaacatagctactgctctcaacatgct--tcta----- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802218 110 + 3010529 catttccttgataaatatttcctaagtactcccatatgccaggcactgccctgggatgtatgaacac---gatgatgaat-taaaacatagctactgctctcaacatgct--tcta----- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920650 110 + 163208435 cattcccttgataaatatttcctaagtactcccatatgccaggcactgccctgggatctacgaacac---aatgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21387975 110 - 74971481 catttccttgacaaatatttcctaagtactcccatataccaggcactgccctgggatctatgaacac---aatgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100615 110 - 78541002 catttccttgacaaatatttcctaagtactcccatataccaggcactgccctgggatctatgaacac---aatgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494254 110 + 26466322 catttccttgacaaatatttcctaagtactcccatataccaggcactgccctgggatctatgaacac---aatgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820869 110 + 43916225 catttccttgacaaatatttcctaagtactcccatataccaggcactgccctgggatctatgaacac---actgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252022 110 + 75399963 catttccttgacaaatatttcctaagtactcccatatgccaggcactgccctgggatctatgaacac---aatgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818621 110 - 7209941 catttccttgacaaatatttcctaagtactcccatataccaggcactgccctgggatctatgaacac---attgatgagt-taaaacatagctactgctctcgagatgct--tcta----- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559397 110 + 3907144 catttccttgacaaatatttcctaagtactcccatatgccaggcactgcccggggatctatgaacac---aatgatgaat-taaaacatagctactgctctcaagatgct--tcta----- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557431 110 - 44557958 cacttccttgacaaacatttcctaactactcccatatgccaggcactgccccgggatctatgaatgc---aatgaagaat-taaaacttagctactgctcttaagatgct--tcta----- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372301 108 + 6628207 cacttccttgacaaacatttcctaagtactcccatatgccaggcactgtcccggaatctatgaatgc---aatgaagaat-taaaac--agctactgctcttaagatgat--tcta----- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355184 110 - 5917169 cacttccttgacaaacatttcctaagtactcccatatgcctggcactgtcccgggatctatgaatgc---aatgaagaat-taaaacatagctactgctcttaacatgat--tcta----- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307732 110 - 10531588 cacttccttgacaaacatttcctaagtactcccatatggcaggcactgtcccgggatctatgaatgc---aatgaagaat-taaaacatagctactgttcttaagatgct--tcta----- i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957278 110 + 72247402 TATttccttcataagtatctcctaagtactaccgtatgccaggcactatcctaggatctaagaacac---aaaggtaaat-aaaaacatagctactgctctcaagaagct--tcta----- i micMur3.chr20 C 0 I 4 s proCoq1.NW_012152729v1 2963641 110 + 9850184 tatttccttgataaatatctcctaagtactactatatgccaggcactatcctaggatctaagaacat---aatggtaaat-agaaacatagctactgctccctagaagcc--tcta----- i proCoq1.NW_012152729v1 C 0 I 4 s otoGar3.GL873566 13737157 113 + 13852661 catttcctcgacaaatatctccaaagtactactatataccaggtactatcctaggatctaagaatacaaaaatgttaaat-aaaaacatagctactgctctcaagaagct--tcta----- i otoGar3.GL873566 C 0 I 839 s mm10.chr8 22493233 106 - 129401213 catttatttgataaacatatcctaaatcctactacagtctagccactgtcctaggaatcaagaccac---aatggtga---tgaaa--tagccaCTGACCTAAAGACTCG--TCTA----- i mm10.chr8 I 119 C 0 s canFam3.chr5 80487278 110 + 88915250 catgtacttgttaaaaattttctaagtactaccatatgccag-cactatcctggga-ctaagaacct---aacggtaaat-aaaaacatagctattggcgtcaagcttgtagtcta----- i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 953836 116 + 1009443 Aatttatttaataaatacttattaagtactatcatatgccaagcagtgtcctaggatctgaaaacat---aatggtgaataaaaaacacagctactgctctcaagaattg--tatgatcta i dasNov3.JH569970 C 0 C 0 a score=387346.000000 s hg38.chr16_GL383557v1_alt 76453 29 + 89672 aaggggtgacacagaattaaatcagcaat s panTro5.chr16 21507958 29 - 81586097 aaggggtgacacagaattaaatcagcaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569105 29 - 90481686 aaggggtgacacagaattaaatcagcaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802328 29 + 3010529 aaggggtgacacagaattaaatcagcaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920760 29 + 163208435 aaggggtgacacaaaattaaatcagcaat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388085 29 - 74971481 aaggggtgacacagaactaaatcagcaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100725 29 - 78541002 aaggggtgacacagaactaaatcagcaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494364 29 + 26466322 aaggggtgacacagaaccaaatcagcaat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20820979 29 + 43916225 aaggggtgacacagaactaaatcagcaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252132 29 + 75399963 aaggggtgacacagaactaaatcagcaat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818731 29 - 7209941 aaggggtgacacagaactaaatcagcaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559507 29 + 3907144 aaggggtgacacagaactaaatcagcaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557541 28 - 44557958 aaggggtga-acagaactacatcagccat i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372409 29 + 6628207 gagagatgacacagaACTACATCAGCCAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355294 29 - 5917169 aaggggtgacacagaactacatcagccat i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307842 29 - 10531588 aaggggtgacacagaactacatcagccat i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957392 28 + 72247402 aaagggtgacacagaattaaat-atcaat i micMur3.chr20 I 4 C 0 s proCoq1.NW_012152729v1 2963755 28 + 9850184 aaagggtgacacagaattaaat-atcaat i proCoq1.NW_012152729v1 I 4 C 0 s mm10.chr8 22493339 24 - 129401213 AAGAAATGACATAGA-----CTAGGCAGT i mm10.chr8 C 0 C 0 s canFam3.chr5 80487389 28 + 88915250 aagggctgacaaataatta-atcaggcaC i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 953952 29 + 1009443 agagggtgacatagaATTAAATGTGAAAT i dasNov3.JH569970 C 0 C 0 e otoGar3.GL873566 13737270 839 + 13852661 I a score=445329.000000 s hg38.chr16_GL383557v1_alt 76482 35 + 89672 tagacttca------gtgtgccaag-aattt-taacacggcta s panTro5.chr16 21507987 35 - 81586097 tagacttca------gtgtgccaag-aattt-taacacggcta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569134 35 - 90481686 tagacttca------gtgtgccaag-aattt-taacacggcta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802357 35 + 3010529 tagacttca------gtgtgccaag-aattt-taacacggcta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920789 35 + 163208435 tagacttca------gtgtgccaag-aattt-taacacggcta i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388114 35 - 74971481 aagacttta------gtgtgacaag-aattt-taacacggcta i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100754 35 - 78541002 aagacttta------gtgtgacaag-aattt-taacacggcta i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494393 35 + 26466322 aagacttta------gtgtgacaag-aattt-taacacggcta i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821008 35 + 43916225 aagacttta------gtgtgacaag-aattt-taacacggcta i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252161 35 + 75399963 aagacttta------gtgtgacaag-aattt-taacacggcta i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818760 35 - 7209941 aagacttta------gtgtgacaag-aattt-taacacggcta i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559536 35 + 3907144 tagacttta------gtgtgacaag-aattt-taacacggcta i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557569 36 - 44557958 tatacttca------gggtgCAAAG-AATTTCTAACATGGCTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372438 36 + 6628207 TATACTTCA------GGGTACCAAG-AATTTTTAACATGGCTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355323 36 - 5917169 catacttca------gggtgccaag-AATTTTTAACATGGCTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307871 36 - 10531588 tatacttca------gggtgccaag-AATTTTTAACATGGCTA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957420 36 + 72247402 tacatttca------gtatgccaagaaattt-taacatggcaa i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963783 35 + 9850184 tacatttca------gtacgccaag-aattt-taacatggcaa i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13738109 26 + 13852661 TATACTTCA------GT----------ATTT-TAACATGGCTA i otoGar3.GL873566 I 839 C 0 s mm10.chr8 22493363 41 - 129401213 CATGCTATATATAGGGTATGGTGCA-AGATT-TAACACGGACA i mm10.chr8 C 0 C 0 s canFam3.chr5 80487417 34 + 88915250 TGCACTA-A------GTGTGTCAAG-AATTT-TAACAGAGCTA i canFam3.chr5 C 0 I 217 s dasNov3.JH569970 953981 35 + 1009443 TACATTACG------GTGTGCTAAG-AAATT-TAACATGGATA i dasNov3.JH569970 C 0 C 0 a score=1745247.000000 s hg38.chr16_GL383557v1_alt 76517 127 + 89672 aaca-cagtatgtactgaaaaataaggagacaggacat-------------ctaacctagctgtgtggtggtaaatacagaagcccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaacattc s panTro5.chr16 21508022 127 - 81586097 aaca-cagtatgtactgaaaaataaggagagaggacat-------------ctaacctagctgtgtggtggtaaatacagaagcccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaacattc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569169 127 - 90481686 aaca-cagtatgtactgaaaaataaggagagaggacat-------------ctaacctagctgtgtggtggtaaatacagaagcccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaacattc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802392 127 + 3010529 aaca-cagtatgtactgaaaaataaggagagaggacat-------------ctaacctagctgtgtggtggtaaatacagaagcccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggaagaacattc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920824 127 + 163208435 aaca-cagtatgtactgaaaaataaggagagaggacat-------------ctaacctagccgtctggtggtaaatacagaagcccagaagaggttcaccgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaacgttc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388149 127 - 74971481 aaca-cagtatgtactgaaaactaaggaaagaggactt-------------ctaacctagacgtgtggtggtaaacatagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100789 127 - 78541002 aaca-cagtatgtactgaaaactaaggaaagaggactt-------------ctaacctagacgtgtggtggtaaacacagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494428 125 + 26466322 aaca-cagtatgtactgaaaactaaggaaagaggactt-------------ctaacctagacgtgtggtggt--acacagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821043 127 + 43916225 aaca-cagtatgtactgaaaactaaggaaagaggactt-------------ctaacctagacgtgtggtggtaaacacagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252196 127 + 75399963 aaca-cagtatgtactgaaaactaaggaaagaggactt-------------ctaacctagacgtgtggtggtaaacacagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818795 127 - 7209941 aaca-cagtatgtactgaaaactaaggaaagaggactt-------------ctaacctagacgtgtggtggtaaacacagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559571 127 + 3907144 aaca-cagtatgtactgaaaaataaggaaagaggactt-------------ctaacctagacgtgtggtggtaaacacagaagtccagatgaggttcactgggaaagaccagtcaggc-gaaggagg-----------------------------------------------ca--gggcagaatgttc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557605 124 - 44557958 AACA-CAGTATGTACTGAAAAATAAGGAG-----ACAT-------------CTAATCTAGCTGAGTGGTGGCAAATACAGAAGCCCAGATGAGGTTCACTGGGAAAGACCAGTCAGGC-GAAGGAGG-----------------------------------------------CAGGGGGCAGAATGTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372474 126 + 6628207 AACA-CAGTATGTACTGAAAAATAAGGAGAGAGAACAT-------------CTAACCTAGCTGAGTGGTGGTAAATACA-AAGCCCAGATGAGGTTCACCGGGAAAGACCAGTCAGGC-AAAGGAGG-----------------------------------------------CA--AGGCAGAATGTTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355359 127 - 5917169 AACA-CAGTATGTACTGAAAAATAAGGAGAGAGAACAT-------------CTAACCAAGCCGAGTGGTGGTAAATACAGAAGCCCAGATGAGGTTCACTGGGAAAGACCAGTCAGGA-GAAGGAGG-----------------------------------------------CA--GGGCAGAATGTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9307907 125 - 10531588 AACA-CAGTATGTACTGAAAAATAAGGAG--AGAACAT-------------CTAACCTAGCTGAGTGGTGGTAAATACAGCAGCCCAGGTGAGGTTCACTGGGAAAGACCAGTCAGGC-GAAGGAGG-----------------------------------------------CA--GGGCAGAATGTTC i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957456 118 + 72247402 aac----atatgtaatgaaaaa-aagcagaaaggacgt-------------ctagctt-----tgtggggggcaagacagaagctcagatgaagttcactaataaagactaatcaggc-aaagaagg-----------------------------------------------ca--gagcaggatgttc i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2963818 121 + 9850184 aaca-ttatacgtaatgaaaaa-aagcagaaaggacat-------------ctagctt-----tgtgggggtcaagacagaagctcagatgaagttcactagtaaagactaatcaggc-aaagaagg-----------------------------------------------ca--gagcaggatgttc i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13738135 167 + 13852661 AACG-GTGTATGCAATGAAAAA-AAGCAGAAAGGACAT-------------CTAGCTT-----TGAGGGGGTAAAGACAGGAGCCCACA-GGAGGTCTCTAGTAAAGACTAATCAGGC-AAAGAATGTTCTTAGGTAAGTGTCCTCAAACTATGGCCCGCAGGCCACATGTGGCCT--GCCCAGGACATTT i otoGar3.GL873566 C 0 I 138 s mm10.chr8 22493404 111 - 129401213 AACC-TAGGATG------------AGCAGAAAGCACAT-------------CTAACTTAGCCTCGTGG-AATATATACAGAA---CAGAAGTAGTTCACTGGTAAAGATTAGTCAAGC-AGAGAAGG-----------------------------------------------CA--AGGTAACAAGTCC i mm10.chr8 C 0 C 0 s canFam3.chr5 80487668 127 + 88915250 AGCA-CAGTATGTAATGAAAAG-AAGTAGAAAAGATAT-------------CTAATCTAGGCTCCTGGGGATAAAGACAGGAGCCCAGATGAGGCTTATTAGTGAAGACTAATCAAGCAAAAAAAGG-----------------------------------------------TA--AGGCAGGATGCTC i canFam3.chr5 I 217 C 0 s dasNov3.JH569970 954016 139 + 1009443 AGCAGAAATGTGTAATGAAAAAT--GTAGAAAAGACTTAGCTGTAGAAAGGCTAGCCTAGCTTTGAAGGGATAATAATAGGAGCCCCAATGGAAGTTCCTGGGAAAGAATATTCAGGC-AAAGAGGG-----------------------------------------------TA--GGACAGGACATTC i dasNov3.JH569970 C 0 C 0 a score=503435.000000 s hg38.chr16_GL383557v1_alt 76644 34 + 89672 tgaggagggtgat-ggcatgtgac--------atagctcaaag s panTro5.chr16 21508149 34 - 81586097 tgaggagggtgat-ggcatgtgac--------atagctcaaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569296 34 - 90481686 tgaggagggtgat-ggcatgtgac--------atagctcaaag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802519 34 + 3010529 tgaggagggcgat-ggcatgtgac--------atagctcaaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920951 34 + 163208435 tgaagagggcgat-ggcatgtgac--------atagctcaaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388276 34 - 74971481 tgaggagggcgat-ggcatgtgac--------atagctcaaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100916 34 - 78541002 tgaggagggcgat-ggcatgtgac--------atagctcaaag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494553 34 + 26466322 tgaggagggcgat-ggcatgtgac--------atagctcaaag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821170 34 + 43916225 tgaggagggcgat-ggcatgtgac--------atagctcaaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252323 34 + 75399963 tgaggagggcgat-ggcatgtgac--------atagctcaaag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818922 34 - 7209941 tgaggagggcgat-ggcatgtgac--------atggctcaaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559698 34 + 3907144 tgaggagggcaat-cgcatgtgac--------ataactcaaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557729 34 - 44557958 TGAGGAGGTTGAT-GGCATATGAC--------ATAGCTCAAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372600 34 + 6628207 TGAGGAGGTTGAT-GGCATGTGAC--------ACAGCTCAAAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355486 34 - 5917169 TGAGGAGATTGAT-GGCATGTGAC--------ATAGCTCAACG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9308032 34 - 10531588 TGAGGAGGTTGAT-GGCATGTGAC--------ATAGCTCAAAG i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54957574 34 + 72247402 taaggagagaaaa-ggcatgtgaa--------atagctcaaag i micMur3.chr20 C 0 I 1299 s proCoq1.NW_012152729v1 2963939 34 + 9850184 taaggagagaaat-ggcatgtgaa--------atagcccaaag i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13738440 34 + 13852661 TAAGGAGAGCAAC-AGCATGTTAA--------AATACTCAAAG i otoGar3.GL873566 I 138 C 0 s mm10.chr8 22493515 40 - 129401213 -CAGGGAGGAAAG-GGCGTGTGACCTCTCATTGTGCCTCAAG- i mm10.chr8 C 0 C 0 s canFam3.chr5 80487795 35 + 88915250 CAGGCAAAGTGATAGGCATGTAAA--------ACAGCTCAAAG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 954155 34 + 1009443 CAAAGAGAATGAG-GGTGTATGAA--------ATGGCTCATAG i dasNov3.JH569970 C 0 C 0 a score=2190835.000000 s hg38.chr16_GL383557v1_alt 76678 197 + 89672 gt------aagagtatttgagggaaca---aaaaga--c-cttgagaatggctagcctggg-t-ggg---ggtgctacaagcac-------gagaggtgcaa-aaagaagctgaag--ggccaggcctggatggagacaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taaccagagg-ctttgaagcatggagtg-atgaac s panTro5.chr16 21508183 197 - 81586097 gt------aagagtatttgagggaaca---aaaaga--c-cttgagaatggctagcctggg-t-ggg---ggtgctacaagcac-------gagaggtgcaa-aaagaagctgaag--ggccaggcctggatggagacaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taaccagagg-ctttgaagcatggagtg-atgaac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569330 197 - 90481686 gt------aagagtatttgagggaaca---aaaaga--c-cttgagaatggctagCCTGGG-T-GGG---GGTGCTACAAGCAC-------GAGAGGTGCAA-AAAGAAGCTGAAG--GGCCAGGCCTGGATGGAGACAGGTTCTATAAGACACACTAAGGAAACT---GTCTTTATGCTGAAGCCAACAGGGA--TAACCAGAGG-CTTTGAAGCATGGAGTG-ATGAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802553 197 + 3010529 gt------aagagtatttgagggaaca---aaaaga--c-cttgagaatggctagcctggg-t-ggg---ggtgctacaagcac-------gagaggtgcaa-aaagaagctgaag--ggccaggcctggatggagacaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taaccagagg-ctttgaagcatggagtg-atgaac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53920985 193 + 163208435 gt------aagagtatttgagggaaca---aaaaga--c-cttgagaatgactagcctggg-t-gag---ggtgctacaagcag-------gagagatgcaa-aaggaagctgaag--ggccaggcctggatgg----aggttctataagacacactaaggaaact---gtctttatgctgaagccaactggga--taactagagg-ctttgaagcatggaacg-atgaac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388310 197 - 74971481 gt------aagagtatttgcgggaaca---aaaaga--c-cttgagagtggctagcctggg-t-ggg---ggtgctacaagcat-------gagaggtgcta-caggaagctaaag--ggccaggcctggatggagacaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taatcaaagg-ctttgaagcatgcagca-atgaac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21100950 197 - 78541002 gt------aagagtatttgcgggaaca---aaaaga--c-cttgagagtggctagCCTGGG-T-GGG---GGTGCTACAAGCAT-------GAGAGGTGCTA-CAGGAAGCTAAAG--GGCCAGGCCTGGATGGAGACAGGTTCTATAAGACACACTAAGGAAACT---GTCTTTATGCTGAAGCCAACAGGGA--TAATCAAAGG-CTTTGAAGCATGCAGCA-ATGAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494587 197 + 26466322 gt------aagagtatttgcgggaaca---aaaaga--c-cttgagagtggctagCCTGGG-T-GGG---GGTGCTACAAGCAT-------GAGAGGTGCTA-CAGGAAGCTAAAG--GGCCAGGCCTGGATGGAGACAGGTTCTATAAGACACACTAAGGAAACT---GTCTTTATGCTGAAGCCAACAGGGA--TAATCAAAGG-CTTTGAAGCATGCAGCA-ATGAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821204 197 + 43916225 gt------aagagtatttgcgggaaca---aaaaga--c-cttgagagtggctagcctagg-t-ggg---ggtgctacaagcat-------gagaggtgcta-caggaagctgaag--ggccaggcctggatggagacaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taatcaaagg-ctttgaagcatgcagca-atgaac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252357 198 + 75399963 gt------aagagtatttgtgggaaca---aaaaga--c-cttgagagtggctagCCTGGG-TGGGG---GGTGCTACAAGCAT-------GAGAGGTGCTA-CAGGAAGCTGAAG--GGCCAGGCCTGGATGGAGACAGGTTCTATAAGACACACTAAGGAAACT---GTCTTTATGCTGAAGCCAACAGGGA--TAATCAAAGG-CTTTGAAGCATGCAGCG-ATGAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6818956 197 - 7209941 gt------aagagtatttgcgggaaca---aaaaga--c-tttgagagtggctagcctggg-t-ggg---ggtgctacaagcat-------gagaggtgcta-caggaagctgaag--ggccaggcctggatggagacaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taatcaaagg-ctttgaagcatgcagca-atgaac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559732 197 + 3907144 gt------aagagtatttgcgggaaca---aaaaga--c-cttgagagttgctagcctggg-t-agg---ggtgctacaagcat-------gagaggtacta-caggaagctgaag--ggccaggcctggatggagagaggttctataagacacactaaggaaact---gtctttatgctgaagccaacaggga--taatcaaagg-ctttgaagcatgcagtg-atgaac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557763 203 - 44557958 GTAA---AAAGAGTATTCAAGGGAACA---AAAACA--C-TTTGAGAATGGCTAGCCTGGG-T-AAG---GGCGCTACAAGTGTGAG----GAGAGGTTAGA-CAGGAAGCTGAAG--GGCCAGGCCCGGAGGGAAATGGGTTCTATAAGCCACATTAAGGAATCT---GTCTTTACACTGAAGCCAACAGGGA--TAACAGGAGG-CTTTGAAGCATGGAGTG-ATGAAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372634 200 + 6628207 GTAA---AAAGAGTATTCAAGGG-ACA---AAAACA--C-GTTGAGAATGGCTAGCCTGGGTT-AAG---GGCGCTACAAGTGT-------GAGAGGTGAGA-CAGGAAGCTGAAG--GGCCAGGCCCGGAGGGAGACAGGTTCTATATGCCACACTAAGGAACCT---ATCTTTATGCTGAAGCCAACAGGGA--TAACAGGAGG-CTTTGAAGCATGGAGTG-ATGAAC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355520 203 - 5917169 GTAA---AAAGAGTATTCAAGGGAACA---AAAACA--C-TTTGAGAATGGCTAGCCTGGG-T-AAG---GGTGTTACAAGTGTGAG----GAGAGGTGAGA-CAGGAAGCTGAAG--GGCCAGGCCCGGAGGGAGACAGGTTCTATAAGCCACACTAAGGAACTT---GTCTTCACACTGAAGCCAACAGGGA--TAACAGGAGG-CTTTGAAGCATGGAGTG-ATGAAC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9308066 203 - 10531588 GTAA---AAAGAGTATTCAAGGGAACA---AAAACA--C-TTTGAGAATGGCTAGCCTGGG-T-AAG---GGCACTACAAGTGTGAG----GAGAGGTAAGA-CAGGAAGCTGAAG--GGCCAGGCCCGGAGGGAGACAGGTTCTATAAGACACACTAAGGAACCT---GTCTTTACGCTGAAGCCAACAGGGA--TAACAGGAGG-CTTTGAAGCATGGAGTG-ATGAAC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2963973 203 + 9850184 ---gt-caaagagcattcgaggtaata---aaaagt--c-tttcaaaatggctagcctggg-t-ggg----gtgctgcaggtgtgtgaaacgagaggtgaga-gaagcagctaaag--ggccagggatagactgAGACAGGTTCTATAAGCCACGTGAAGGAACCA---GCAT--ATGCTGCAGGCAACAGGGA--TAACCAGAGA-CTTTGAAGCACGGAGTG-ATGAAC i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13738474 188 + 13852661 ---GT-CAAACAGCATTTAAGGGAATA---AAAAGC--T-TTTCAAAATGG-----CTGGG-T-GGG---AATGCTACAGGTGTGTGAA--GGGAGGTAAGA-GAAGCAGCTAAAG--GGGCAGGGCCAGATTGAGACAG-----ACAAGCCACACTAAGGAACCA---TTGT--ACACTGCAGG-AACA-GGA--TGCTCAGAGG-CTTTGAAGCATGAAGTG---TGAT i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22493555 162 - 129401213 ---------GTCAGATGCAAAGCAGCATGGAAAAGA--CTTTTGGGAACGGAAAAGCTGAA-T----------------------------GAG-------------------ACA--GGACAGTCCAAGATCAACACAGGTTTCCACAAACACACCA--GACATTTAGGGCTCTATGCTGAAGACAATAG-----CAACCAAAGGTTTTTTAAACACAGAGAA-ATGAAC i mm10.chr8 C 0 C 0 s canFam3.chr5 80487830 166 + 88915250 ----TCCAGAGAGCCTCAGAGGGAATA-----AAGT--C-TTTCAGCAC-ACTAATCTGAG-A------------------------------------------AGATGCTGAAG--GACCATggccagaccaaggcagatttcataagccatggtaaggaatta---ggtttattcctgaaggcaacaggga--ccaccaacgg-cttttaagcatggaatg-atgagc i canFam3.chr5 C 0 I 8 s dasNov3.JH569970 954189 210 + 1009443 -----TAAAACAGCATTAGAGAGAATA---AAAAGAGTC-TTccagtatagctacactggg-t-ggggtgggggatatggggata------tggggatgctaccaatgtacagaaggagaccaggaccaaatgaggacaggtcttata-gccctactacggaatta--ggtctttatactaggggtaacaagggtctaactgaagg-cttttaagcatgcagtgaaagaac i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54957608 1299 + 72247402 I a score=64657.000000 s hg38.chr16_GL383557v1_alt 76875 4 + 89672 aaag s panTro5.chr16 21508380 4 - 81586097 aaag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569527 4 - 90481686 AAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802750 4 + 3010529 aaag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921178 4 + 163208435 aaag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388507 4 - 74971481 aaag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101147 4 - 78541002 AAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494784 4 + 26466322 AAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821401 4 + 43916225 aaag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252555 4 + 75399963 AAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819153 4 - 7209941 aaag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559929 4 + 3907144 aaag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557966 4 - 44557958 AAAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372834 4 + 6628207 AAAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355723 4 - 5917169 AAAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9308269 4 - 10531588 AAAG i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2964176 4 + 9850184 AAAG i proCoq1.NW_012152729v1 C 0 I 1029 s otoGar3.GL873566 13738662 4 + 13852661 AAAG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22493717 4 - 129401213 ACGG i mm10.chr8 C 0 C 0 s dasNov3.JH569970 954399 4 + 1009443 aaag i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I a score=218646.000000 s hg38.chr16_GL383557v1_alt 76879 18 + 89672 gtgc-ttta-aaacagatca s panTro5.chr16 21508384 18 - 81586097 gtgc-ttta-aaacagatca i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569531 18 - 90481686 GTGC-TTTA-AAACAGATCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802754 18 + 3010529 gtgc-ttta-aaacagataa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921182 18 + 163208435 ttgc-ttta-aaacagatca i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388511 18 - 74971481 ttgc-ttta-aaacagatca i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101151 18 - 78541002 TTGC-TTTA-AAACAGATCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494788 18 + 26466322 TTGC-TTTA-AAACAGATCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821405 18 + 43916225 ttgc-ttta-aaacagatca i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252559 18 + 75399963 TTGC-TTTA-AAATAGATCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819157 18 - 7209941 ttgc-ttta-aaacagatca i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559933 18 + 3907144 ttgc-ttta-aaacagatca i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557970 18 - 44557958 TTGC-GTTG-AAACAGATCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6372838 18 + 6628207 TTGC-TTTA-AAATAGATCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3355727 18 - 5917169 TTGC-TTTA-AAACAGATCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9308273 18 - 10531588 TTGC-TTTA-AAACAGATCA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13738666 19 + 13852661 TTGC-TTTCTAAACAGATCA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22493721 18 - 129401213 -TGCTTTTA-GAACAACCCA i mm10.chr8 C 0 C 0 s dasNov3.JH569970 954403 19 + 1009443 ctgc-tttttaaacagatca i dasNov3.JH569970 C 0 I 713 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I a score=845785.000000 s hg38.chr16_GL383557v1_alt 76897 87 + 89672 atgggcctggagcagtg-------------------------------------------gctcatgcctgtaatgccagcaatcgagaggctgaggtgcgaggatt----gcttgagacc-------------aggagtttgagac s panTro5.chr16 21508402 87 - 81586097 atgggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcactcgagaggctgaggtgcgaggatt----gcttgagacc-------------aggagtttgagac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569549 87 - 90481686 ATGggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcactcgagaggctgaggtgcgaggatt----gcttgagacc-------------aggagtttgagac i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802772 87 + 3010529 atgggcctggtgcagtg-------------------------------------------gctcatgcctgtaatcccagcactcgagaggctgaggtgcaaggatt----gcttgagacc-------------aggagtttgagac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921200 87 + 163208435 atgggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcacttgggaggctgaggtgtgaggact----gcttgagacc-------------aggagtttgagac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388529 87 - 74971481 atgggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcacttgggaggctgaggtgggaggatt----gcttgagacc-------------aggagtttgagat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101169 87 - 78541002 ATGggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcacttgggaggctgaggtgggaggatt----gcttgagacc-------------aggagtttgagat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494806 87 + 26466322 ATGggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcacttgggaggctgaggtgggaggatt----gcttgagacc-------------aggagtttgagat i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821423 75 + 43916225 gtgggcctgga-------------------------------------------------------gcctgtaatcccagcacttgggaggctgaggtgggaggatt----gcttgagacc-------------aggagtttgagat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252577 87 + 75399963 ATGggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcacttggggggctgaggtgggaggatt----gcttgagacc-------------aggagtttgagat i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819175 87 - 7209941 atgggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcacttgggaggctgaggtgggaggact----gcttgagacc-------------aggagtttgagat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 559951 87 + 3907144 atgggcctggagcagtg-------------------------------------------gctcatgcctgtaatcccagcatttgggaggctgaggtgggaagatt----gcttgagacc-------------aggagtttgagat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21557988 86 - 44557958 GTGggcctgaagcaatg-------------------------------------------gctcatgcctgtaatcccagcacttggg-ggccgaggtgggaggatt----gcttgagacc-------------aggagtttgagac i calJac3.chr20 C 0 I 11 s saiBol1.JH378225 6372856 87 + 6628207 GTGggcctggagcaatg-------------------------------------------gcaagtgcctgtaattccaacacttgggaggccgaggtgggaggact----gcttgagacc-------------aggaatttgagac i saiBol1.JH378225 C 0 I 11 s cebCap1.NW_016107433v1 3355745 87 - 5917169 ATGggcctggagcaatg-------------------------------------------gctcatgcctgtaatcccagcacttggaaggccgaggtgggaggatt----gcttgagacc-------------aggagtttgagac i cebCap1.NW_016107433v1 C 0 I 799 s aotNan1.NW_018500622v1 9308291 87 - 10531588 ATGggcctggagcaatg-------------------------------------------gctcatgcctgtaatcccagcacttgggaggccgaggtgggaggact----gattgagacc-------------aggagtttgagac i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13738685 60 + 13852661 ATGG----AGAATA----------------------------------------------------GGCTGGAATGATACAAATAGAAA----------TAAAGATC----A-TTAAGACT-------------ATAAA---GGAAC i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22493739 147 - 129401213 AGGAGCATAGGGTAGCACGACACAGACGTTGATAAAAGGAGACTACGAagctggtcacgtgtgcatgtctttaatcccagcactcgggaggcagaagcaagagatctctgagttctagaccaccctggtctacaaagagttctagga i mm10.chr8 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I a score=424993.000000 s hg38.chr16_GL383557v1_alt 76984 57 + 89672 tggcctgggcaagat-agtgagatcttgcctctatt-aaaaa-aaataaaaaataaaaaa s panTro5.chr16 21508489 57 - 81586097 tggcctgggcaagat-agtgagatcttgcctctatt-aaaaa-aaataaaaaataaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569636 56 - 90481686 tggcctgggcaagat-agtgagatcttgcctctatt--aaaa-aaataaaaaataaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802859 57 + 3010529 tggcctgggcaagat-agtgagatcttgtctctatt-aaaaa-aaattaaaaataaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921287 57 + 163208435 tggcctgggcaagac-agtgagatcttgtctctatt-aaaaa-aaataaaaaataaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388616 58 - 74971481 cggcctgggcaagat-agtgagatcttgtctctatt-aaaaataaacaaaaaataaaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101256 58 - 78541002 cggcctgggcaagat-agtgagatcttgtctctatt-aaaaataaacaaaaaataaaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494893 58 + 26466322 cggcctggacaagat-agtgagatcttgtctctatt-aaaaataaacaaaaaataaaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821498 59 + 43916225 cggcctgggcaagat-agtgagatcttgtctctattaaaaaataaattaaaaataaaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252664 58 + 75399963 cggcctgggcaagac-agtaagatcttgtctctatt-aaaaaaaaataaaaaataaaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819262 58 - 7209941 cggcctgggcaagat-agtgagatcttgtctctatt-aaaaataaataaaaaataaaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560038 58 + 3907144 cggcctgggcaagat-aatgagatcttgtctctatt-aaaaaaaaataaaaaataaaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21558085 57 - 44557958 cagcctggacaagac-agtgagatattatctccatt-aaaaa-aaattaaaaaaaaaaaa i calJac3.chr20 I 11 C 0 s saiBol1.JH378225 6372954 56 + 6628207 cagcctggacaaggtaagtgagatattatctctatt-aaaaa-aa--ttaaaaaaaaaaa i saiBol1.JH378225 I 11 C 0 s aotNan1.NW_018500622v1 9308378 55 - 10531588 cagcctggacaagat-agtgagatattatcgctatt-aaaaa-aa--ttaaaaaaaaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13738746 34 + 13852661 CAGATGAGAAAAGAC-TGTG-------------ATC-CAAAC-----------TAGGACA i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22493886 51 - 129401213 cagctagtgctacac-agagaaatcctgtct------aaaaacaa--aacaaaCAAAAAA i mm10.chr8 C 0 I 752 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I a score=54150.000000 s hg38.chr16_GL383557v1_alt 77041 6 + 89672 attagc s panTro5.chr16 21508546 6 - 81586097 attagc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569692 6 - 90481686 attagc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802916 6 + 3010529 attagc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921344 6 + 163208435 attagc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388674 6 - 74971481 attagc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101314 6 - 78541002 attagc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494951 6 + 26466322 aTTAGC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821557 6 + 43916225 attagc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252722 6 + 75399963 attagc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819320 6 - 7209941 attagc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560096 6 + 3907144 attagc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21558142 6 - 44557958 attagc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373010 6 + 6628207 attagc i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9308433 6 - 10531588 attagc i aotNan1.NW_018500622v1 C 0 I 511 s otoGar3.GL873566 13738780 2 + 13852661 AT---- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I a score=16745.000000 s hg38.chr16_GL383557v1_alt 77047 4 + 89672 cgag s panTro5.chr16 21508552 4 - 81586097 tgag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569698 4 - 90481686 cgag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802922 4 + 3010529 cgag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921350 1 + 163208435 t--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388680 4 - 74971481 cgag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101320 4 - 78541002 cgag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494957 4 + 26466322 CGAg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20821563 4 + 43916225 cgag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252728 4 + 75399963 cgag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819326 4 - 7209941 cgag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560102 4 + 3907144 cgag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21558148 4 - 44557958 tggg i calJac3.chr20 C 0 I 614 s otoGar3.GL873566 13738782 3 + 13852661 -GAA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e saiBol1.JH378225 6373016 0 + 6628207 C a score=1331576.000000 s hg38.chr16_GL383557v1_alt 77051 227 + 89672 gccgggcacagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacatgg--tgaaaccctgtctc-------tactaaaaatacaaaaaaaattacctaggcgtggtggcgggtgcctgtaatcccagctactagggaggctgaggcaggagaatcg-cttgaacccaggagactgaggttgcag s panTro5.chr16 21508556 227 - 81586097 gccgggcacagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacatgg--tgaaaccctgtctc-------tactaaaaatacaaaaaaaattacctaggcgtggtggcgggtgcctgtaatcccagctactagggaggctgaggcaggagaatcg-cttgaacccaggagactgaggttgcag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569702 226 - 90481686 gccgggcacagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacatgg--tgaaaccctgtctc-------tactaaaaatac-aaaaaaattacctaggcatggtggcgggtgcctgtaatcccagctactagggaggctgaggcaggagaatcg-cttgaacccaggagactgaggttgcag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 802926 227 + 3010529 gccggggacagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaaga-------------------------------ccagcctggccaacatgg--tgaaaccctgtctc-------tactaaaaatacaaaaaaaattacctaggcgtggtggcgggtgcctgtaatcccagctactagggaggctgaggcaggagaatcg-cttgaacccaggagactgaggttgcag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921351 222 + 163208435 ---gggcacagtggctcacgcctgtaatcccagcattttgggaggccaaggcgggtggatcacctgagatcaggagttcgaga-------------------------------ccagcctggccaacatgg--tgaaaccctgtctc-------tactaaaaatac--aaaaaattacccgggcatggtggcaggtgcctgtaatcccagctaccagggaggctgaggcaggagaatcg-cttgaacccaggagactgaggttgcag i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21388684 224 - 74971481 gctgggcgcagtagctcacgtctctaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcgaaa-------------------------------ccagcggggccaacatgg--tgaaacgccgtctc-------cactaaaaatac---aacaattagccgggcgtggtggcagatgcctgtaatcccagctactagggaggctgaagcaggagaatcg-cttgaacccaggagaccgaggttgcag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101324 224 - 78541002 gctgggcgcagtagctcacgtctctaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcgaaa-------------------------------ccagcggggccaacatgg--tgaaacgccgtctc-------cactaaaaatac---aacaattagccgggcgtggtggcagatgcctgtaatcccagctactagggaggctgaagcaggagaatcg-cttgaacccaggagaccgaggttgcag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14494961 224 + 26466322 gctgggcgcagtagctcacgtctctaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcgaaa-------------------------------ccagcggggccaacatgg--tgaaacgccgtctc-------cactaaaaatac---aacaattagccgggcgtggtggcagatgcctgtaatcccagctactagggaggctgaagcaggagaatcg-cttgaacccaggagaccgaggttgcag i macNem1.NW_012011355v1 C 0 M 1629 s cerAty1.NW_011999143v1 20821567 224 + 43916225 gctgggcacagtagctcacgtctctaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcgaaa-------------------------------ccagcggggccaacatgg--tgaaacgccgtctc-------cactaaaaatac---aacaattagctgggcatggtggcagatgcctgtaatcccagctactagggaggctgaagcaggagaatcg-cttgaacccaggagaccgaggttgcag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252732 224 + 75399963 gctgggcgcagtagctcacgtctctaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcaaaa-------------------------------ccagcggggccaacatgg--tgaaacgccgtctc-------cactaaaaatac---aacaattagccgggcgtggtggcagatgcctgtaatcccagctactagggaggctgaagcaggagaattg-cttgaacccaggagaccgaggttgcag i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819330 224 - 7209941 gctgggcgcagtagctcacgtctctaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcgaaa-------------------------------ccagcggggccaacatgg--tgaaacgccgtctc-------cactaaaaatac---aacaattagccgggcgtggtggcagatgcctgtaatcccagctactagggaggctgaagcaggagaatcg-cttgaacccaggagaccgaggttgcag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560106 209 + 3907144 gctaggcgcagtagctcacatctctaatcccagtactttgggaggccaaggctggtggatcacctgaggtcaggagttcgaaa-------------------------------ccagtggg------------------gccgtctc-------cactaaaaatac---aacaattagccaggtgtggtggcagatgcctgtaattccagctactagggaggctgaagcaggagaatcgccttgaacccaggagaccgaggttgcag i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6373016 229 + 6628207 --------------------------------------tgggaggctgaggcaggagaaacgcttgaacctgggaggcagagattgcagtgagctgagatcatgccactacaatcctgcctgggcaacaagagcgaaaacgccatctcaaaacgaaaacaaaaacaaaaaAACAACTAgctgagtgtggtggcgcacacctgtggttccagtgactcaggaggccgagatgagaggacta-tttaagctcaggaagcagaggttacag i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13738785 191 + 13852661 ----GCCAGCAAAgcgcacccctatagtaccagctactcaggaggctgaggtgagaggatcccttgagcccagaagt-------------------------------------tcagcctgggcaatacag--taagatcccatctc------------aaaaagc---aac----atccaggcatggtggctcacacctgtaatcctagcactttgggaggctgagat-ggaggattg-cttgaggccaggag------------- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e calJac3.chr20 21558152 614 - 44557958 I a score=295945.000000 s hg38.chr16_GL383557v1_alt 77278 58 + 89672 tgagccgagatttcactactacactccagcctgggcaacaagagcaaagctctgtctc s panTro5.chr16 21508783 58 - 81586097 tgagccgagatttcactactacactccagcctgggcaacaagagcaaagctccgtctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569928 58 - 90481686 tgagccgagatttcactactacactccagcctgggcaacaagagcaaagctccgtctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803153 58 + 3010529 tgagccgagatttcaccactacactccagcctgggcaacaagagcaaagctccgtctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921573 58 + 163208435 tgagctgagattgcgccattgcactccagcctgggcaaaaagagcaaagctctgtctc i nomLeu3.chr2 C 0 I 8 s rheMac8.chr20 21388908 58 - 74971481 agagccgagatcacaccactacactccagcctgggcaacaagggcaaagctccgtctc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101548 58 - 78541002 agagccgagatcacaccactacactccagcctgggcaacaagggcaaagctccgtctc i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20821791 58 + 43916225 agagccgagatcacaccactacaatccagcctgggcaacaagggcaaagctccgtctc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58252956 58 + 75399963 agagccgagatcacaccactacactccagcctgggcaacaagggcaaagctccgtctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819554 58 - 7209941 agagccgagatcacaccactacactccagcctgggcaacaagggcaaagctccgtctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560315 58 + 3907144 tgagccgagatcataccactacactccagcctgggcaacaggggcaaagctccgtctc i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6373245 57 + 6628207 tgaggcaggatcacgccactgcaatccagtctgggtgaca-gagcaagaccttgtctc i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13738976 36 + 13852661 ------------------ttcaataccagcttaagctaca----tagcatctcatctc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e calJac3.chr20 21558152 614 - 44557958 I a score=983255.000000 s hg38.chr16_GL383557v1_alt 77336 211 + 89672 aaaaaaaaaaaaaaaaaaaaaagaaaaac-----agaaattagctgagcctggtggcgcatgcctg------cagctccagcaactcgggaggctgatgtgg-----gaggactgcttgagctcaagaagcagaggttacagtgagccaagattacaccactgcagtgcagcctgggtgacggagcaagaccttgtctcaaaaaaacaaaaac----------aaataaaataaaat s panTro5.chr16 21508841 205 - 81586097 ------aaaaaaaaaaaaaaaagaaaaac-----agaaattagctgagcctggtggcgcatgcctg------cggctccagcaactcgggaggctgaggtgg-----gaggattgcttgagctcaagaagcagaggttacagtgagccaagattacaccactgcagtgcagcctgagtgacggagcaagaccttgtctcaaaaaaacaaaaac----------aaataaaataaaat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21569986 204 - 90481686 -------aaaaaaaaaaagaaagaaaaac-----agaaattagctgagcctggtggcgcatgcctg------cggctccagcaactcgggaggctgaggtgg-----gaggattgcttgagctcaagaagcagaggttacagtgagccaagattacaccactgcagtgcagcctgagtgacggagcaagaccttgtctcaaaaaaacaaaaac----------aaataaaataaaaT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803211 202 + 3010529 -------aaaaaaaaaaagaaagaaaaac-----agaaattagctgagcctggtggcgcatgcctg------cggctccagcgactagggaggctgaggtgg-----gaggattgcttgagctcaagaagcagaggttacagtgagccaagattacaccactgcagtccagcctgggtgacggagcaagaccttgtctcaaaaaaacaaaaaa----------aa--caaataaaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921639 215 + 163208435 aaaaaaaaaaaaaaaaaagaaagaaaaa------agaaattagctgagcatggtggcgcatgcctg------tggctccagcgactcgggaggctgaggtgg-----gaggattgcttaagctcaggaaacagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgacggagcaagaccttgtctcaaaaaaacaaaaac-----gaataaaataaaataaaat i nomLeu3.chr2 I 8 C 0 s rheMac8.chr20 21388966 215 - 74971481 -aaaaaaaaaaaaaaagaaaaagaaaaaa-----agaaattagctgagcgtggtggcggatgcctg------tggttccagcgactcaggaggctgaggtgg-----gaagacttcttgagctcaggaagcagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgatggagcaagaccttgtctcaaaaaaataaagac-----aaataaaataaaataaaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101606 215 - 78541002 -aaaaaaaaaaaaaaagaaaaagaaaaaa-----agaaattagctgagcgtggtggcagatgcctg------tggttccagcgactcaggaggctgaggtgg-----gaagactgcttgagctcaggaagcagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgatggagcaagaccttgtctcaaaaaaacaaagac-----aaataaaataaaataaAAT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20821849 200 + 43916225 -a---------------aaaaagaaaaaa-----agaaattagctgagcgtggtggtggatgcctg------tggttccagcgactcaggaggctgaggtgg-----gaagactgcttgagctcaggaagcagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgacggagcaagaccttgtctcaaaaaaacaaagac-----aaataaaataaaataaaat i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253014 214 + 75399963 -aaaaaaaaa-gaaaagaaaaagaaaaaa-----agaaattagctgagcgtggtggcggatgcctg------tggttccagcaactcaggaggctgaggtgg-----gaagactgcttgagctcaggaagcagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgacggagcaagaccttgtctcaaaaaaacaaagac-----aaacaaaaaaaaatAAAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819612 218 - 7209941 -aaaaaaaaa--aaaagaaaaagaaaaaa-----agaaattagctgagtgtggtggtggatgcctg------tggttccagcgactcaggaggctgaggtgg-----gaagactgcttgagctcaggaagcagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgacggagcaagaccttgtctcaaaaaaacaaaGACaaataaaataaaataaaataaaat i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560373 213 + 3907144 -aaaaaaaaa--aaaaagaaaagaaaaaa-----agaaattagctgagcgtggtggcggatgcctg------tggttccagcgactcaggaggctgaggtgg-----gaagactgcttgagctcaggaagcagaggttacagtgagccaagatcacaccactgcaatccagcctgggtgacagagcaagaccttgtctcaaaaaaacaaagac-----aaataaaataaaataaaat i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739012 213 + 13852661 -------tataaaaaataaaaataaataatttttaaaaatgacctgggcatggtagcacatgcctggcaaatttgtcctagctacttaggaagctaaagctgaggcagaagacagctttagcccaggagtctgaggttgcagtgagctatgatgataccactgcactctaggcagggcaacacagggagaccctgtctcaggaaga-----------------aaataaacaaaaac i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80487996 8 + 88915250 I e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=901976.000000 s hg38.chr16_GL383557v1_alt 77547 164 + 89672 aagatcaatgaagaataggctagaa-tgacacaaatgcaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacactgatccaaactaggatgatgccagcgtagacaaagagaaatgAATGACTCGATTCAAGAGATTATGAGGA s panTro5.chr16 21509046 164 - 81586097 aagatcaatgaagaataggctagaa-tgacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacactgatccaaactaggatgatgccagcgtagacaaagagaaatgAATGACTCGATTCAAGAGATTATGAGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570190 164 - 90481686 AAGATCAATGAAGAATAGGCTAGAA-TGACACAAATGGAAATAAAAGGACATGATTAAGAAGCTACTGTAAAGGAACCCAGATGAGAAAAGACACTGATCCAAACTAGGATGATGCCAGCGTAGACAAAGAGAAATGAATGACTCGATTCAAGAGATTATGAGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803413 164 + 3010529 aagatcaatgaagaataggctagaa-tgacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacactgatccaaactaggatgatgccagcgtagacaaagagaaatgAATGACTCAATTCAAGAGATTATGAGGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53921854 164 + 163208435 aagatcaatgaagaatagggtagaa-tgacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacattgatccaaactagggtgatgccagcgtagacaaagagaaatgAATGACTCGATTCAAGAGATTATTAGGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389181 164 - 74971481 aagatcaatgaagaataggctagaa-tgacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacattgatccaaactaggatgatgccagcatagacaaagagaaatgAATGACTCGATTCAAGAGATTATGAGGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101821 164 - 78541002 AAGATCAATGAAGAATAGGCTAGAA-TGACACAAATGGAAATAAAAGGACATGATTAAGAAGCTACTGTAAAGGAACCCAGATGAAAAAAGACATTGATCCAAACTAGGATGATGCCAGCATAGACAAAGAGAAATGAATGACTCGATTCAAGAGATTATGAGGA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822049 164 + 43916225 aagaccaatgaagaataggctagaa-tgacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacattgatccaaactaggatgatgccagcgtagacaaagagaaatgAATGACTCGATTCAAGAGATTATGAGGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253228 164 + 75399963 AAGATCAATGAAGAATAGGCTAGAA-TGACACAAATGGAAATAAAAGGACATGATTAAGAAGCTACTGTAAAGGAACCCAGATGAGAAAAGACATTGATCCAAACTAGGATGACGCCAGCGTAGACAAAGAGAAATGAATGACTCGATTCAAGAGATTATGAGGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819830 164 - 7209941 aagatcaatgaagaataggctagaa-tgacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacattgatccaaactaggatgatgccagcgtagacaaagagaaatgAATGACTCGATTCAAGAGATTATGAGGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560586 164 + 3907144 aagatcaatgaagaacaggctagaa-agacacaaatggaaataaaaggacatgattaagaagctactgtaaaggaacccagatgagaaaagacattgatccgaactaggatgatgccagcgtagacaaaaagaaatgaatgactcgattcaagacatTATGAGGA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739225 75 + 13852661 aacaacaa-----------------------------------------------------------------------------------------aaccaaaaaaagacaaTGGCAGTACAGACAAAAAAAAA-AAAAGACTCAATTTCAAAGATAATTAGGA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80488004 148 + 88915250 aggatcaat----aataggccagaattgacacaaatgtaaataaaaggagaccattta---------acaagggagtccagatgagaaaagacactgattcaaactaggataatggcaatgtagacaaagagaaa----tgactagattcacaaaacaatgaaga i canFam3.chr5 I 8 C 0 e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=575699.000000 s hg38.chr16_GL383557v1_alt 77711 132 + 89672 CtatgttcaacctcatcaaaccatatgcattaaatatgtatgatttttaatatatcaagtatgcctcaatagagctgttGatctat--------ctatct----atctatctatatctataacatatgtataAAGATACTGATG s panTro5.chr16 21509210 122 - 81586097 CtatgttcaacctcatcaaaccatatgcattaaatatgtatgatttttaatatatcaagtatgcctcaatagagctgttGATCTAT--------CTATC--------------TATCTATAACATATGTATAAAGATACTAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570354 122 - 90481686 CtatgttcaacctcatcaaaccatatgcattaaatatgtatgatttttaatatatcaagtatgcctcaatagagctgttGATCTAT--------CTATC--------------TATCTATAACATATGTATAAAGATACTAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803577 128 + 3010529 CtatgttcaacctcatcaaaccatatgcattaaatatgtatgatttttaatatatcaagtatgcctcaatagagctgttGatctat--------ctatc--------tatctatatctataacatatgtataAAGATACTAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922018 124 + 163208435 CTATGTTCAACCTCATCAAACTATACGCATTAAGTATGTATGGTTTTTAATATATCAAATATGCCTCAATAGAGTTGTTGATCTAT--------CTATC------------TATATCTATAACATATGTATAAAGATACTGATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389345 136 - 74971481 Ctatgttcaactttatcatactatatgcattaaatatgtatggtttttaatatatcaaatatgcctcaatagagctgttgatcgac--------cgatcgatcaatcgatctatcTCTACAACATATGTATAAAGATACTCATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21101985 136 - 78541002 Ctattttcaactttatcaaactatatgcattaaatatgtatggtttttaatatatcaaatatgcctcaatagagctgttgatcgac--------cgatcgatcaatcgatctatcTCTACAACATATGTATAAAGATACTCATG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822213 136 + 43916225 Ctatgttcaactttatcaaactatatgcattaaatatgtacggtttttaatatatcaaatatgcctcaatagagctgttgatcgac--------cgatcgatcgatcgatcgatcTCTACAACATATGTATAAAGATACTGATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253392 136 + 75399963 Ctatgttcaactttatcaaactatatgcattaaatatgtacagtttttaatatatcaaatatgcctcaatagagctgttgatcgac--------cgattgatcaatcgatctatcTCTACAACATATGTATAAAGATACTGATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6819994 136 - 7209941 Ctatgttcaactttatcaaactatatgcattaaatatgtacagtttttaatatatcaaatatgcctcaatagagctgttgatcgac--------cgatcgatcgatcgatctatcTCTACAACATACGTATAAAGATACTGATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560750 144 + 3907144 CtatgttcaaccttatcaaactatatgtattaaatatgtacggtttttaatatatcaaatatgcctcaatagagttgttgatcgaccgatcgatcgatcgatcgatcgatcTATCTCTACAACATATGTATAAAGGTACTGATG i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739300 113 + 13852661 Gtatgtccaacgtaatcaaattatatacattaaatatgcacaatctt---tatat--aatatacatcaataaagctACTGATCTCA-------------------------TATGTGAATAA-ACATATACAAGATAACAAGGA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80488152 0 + 88915250 C e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=539034.000000 s hg38.chr16_GL383557v1_alt 77843 92 + 89672 AGTAGACTCAAT-GAGGTTTACTGCTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTTT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA s panTro5.chr16 21509332 92 - 81586097 AGTAGACTCAAT-GAGGTTTACTGCTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTTT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570476 92 - 90481686 AGTAGACTCAAT-GAGGTTTACTGCTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTTT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803705 92 + 3010529 AGTAGACTCAAT-GAGGTTTACTGCTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTTT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922142 92 + 163208435 AGTAGACTCAAT-GAGGTTTACTGCTTGAATG-AATGGGACAGTAGGT-GTGGGGAGCAAGTTTT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389481 92 - 74971481 AGTAGACTCAAT-GAGGTTTACTGGTGGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTCT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102121 92 - 78541002 AGTAGACTCAAT-GAGGTTTACTGGTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTCT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822349 92 + 43916225 AGTAGACTCAAT-GAGGTTTACTGGTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTCT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253528 92 + 75399963 CGTAGACTCAAT-GAGGTTTACTGGTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTCT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820130 92 - 7209941 AGTAGACTCAAT-GAGGTTTACTGGTTGAATG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTTCT-CTAGCTTGGG-AAGATGGTA-CCATTTACCCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560894 88 + 3907144 AGTAGACTCAAT-GAGGTTTACTGGT----TG-AATGGGGCAGCAGGT-GTGGGGAGCAAGTGCT-CTAGCTTGGG-AAGATGGTA-CCATTTACCTA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739413 92 + 13852661 GGCAAGTTCAATGGAGGTTTACTGATTGAATG---TGTGGAATCAAGT-GTAGCGGACAAGGTTTACTAGCTTGGC-AAGATGGTA-CCATTTACTTA i otoGar3.GL873566 C 0 I 5 s canFam3.chr5 80488152 96 + 88915250 ggtagactcagt-aacatttgctggttgagtggaatgtagaagcaagtagtagggagaagagtTT-CTAGCTTGGGAAAGAAAATGTCCTTTTACCTA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2964180 1029 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=322887.000000 s hg38.chr16_GL383557v1_alt 77935 41 + 89672 -----GAACACTGGAAGCCTGGGTTTTCCCGCTCCCACCCAGAATA s panTro5.chr16 21509424 41 - 81586097 -----GAACACTGGAAGCCTGGGTTTTCCCGCTCCCACCCAGAATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570568 41 - 90481686 -----GAACACTGGAAGCCTGGGTTTTCCCGCTCCCACCCAGAATA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803797 41 + 3010529 -----GAACACTGGAAGCCTGGGTTTTCCTGCTCCCACCCAGAATA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922234 41 + 163208435 -----GAACACTGGAAGCCTGGGTTTTCCTGCTCCCACCCAGAATA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389573 41 - 74971481 -----GAACACTGGAAGCCTGGGTTTTCCTGCTCCCACCCAGAATA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102213 41 - 78541002 -----GAACACTGGAAGCCTGGGTTTTCCTGCTCCCACCCAGAATA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822441 41 + 43916225 -----GAACACTGGAATCCTGGGTTTTCCTGCTCCCACCCAGAATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253620 41 + 75399963 -----GAACACTGGAAGCCTGGGTTTTCCTGCTCCCACCCAGAATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820222 41 - 7209941 -----GAACACTGGAAGCCTGGGTTTCCCTGCTCCCACCCAGAATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 560982 41 + 3907144 -----GAACACTGGAAGCCTGAGTTTTCCTGCTCCCACCCAGAATA i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2965209 41 + 9850184 -----GAACACTGGAACCTTGGATTTTCTTGCTCCCACCCAGAATA i proCoq1.NW_012152729v1 I 1029 I 17 s otoGar3.GL873566 13739510 41 + 13852661 -----GAACACTGGAAGCCTGGATTTTCCTGCTTCCACACAGAACA i otoGar3.GL873566 I 5 I 3 s canFam3.chr5 80488248 46 + 88915250 GGAAGGAACACTGGAAGTCTTGATTTTCCTGCTCTCACCCAGAATA i canFam3.chr5 C 0 I 4 e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=107507.000000 s hg38.chr16_GL383557v1_alt 77976 18 + 89672 GAGCCTACCCTGAAAGAC s panTro5.chr16 21509465 18 - 81586097 GAGCCTACCCTGAAAGAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570609 18 - 90481686 GAGCCTACCCTGAAAGAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803838 18 + 3010529 GAGCCTACCCTGAAAGAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922275 18 + 163208435 GAACCTACCCTGAAAGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389614 18 - 74971481 GAGCCTACTCTGAAAGAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102254 18 - 78541002 GAGCCTACTCTGAAAGAC i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822482 18 + 43916225 GAGCCTACTCTGAAAGAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253661 18 + 75399963 GAGCCTACTCTGAAAGAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820263 18 - 7209941 GAGCCTACTCTGAAAGAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561023 18 + 3907144 GAGCCTACTCTGAAAGAC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739554 18 + 13852661 GAACTCACCCTTAAAATC i otoGar3.GL873566 I 3 C 0 s canFam3.chr5 80488298 18 + 88915250 GAGTCCAGTCTTAAAAAC i canFam3.chr5 I 4 C 0 e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965250 17 + 9850184 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=86828.000000 s hg38.chr16_GL383557v1_alt 77994 14 + 89672 AAACTAACAAAATT s panTro5.chr16 21509483 14 - 81586097 AAACTAACAAAATT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570627 14 - 90481686 AAACTAACAAAATT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803856 14 + 3010529 AAACTAACAAAATT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922293 14 + 163208435 AAACTAACAAAATT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389632 14 - 74971481 AAACTAACAAAATT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102272 14 - 78541002 AAACTAACAAAATT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822500 14 + 43916225 AAACTAACAAAATT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253679 14 + 75399963 AAACTAACAAAATT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820281 14 - 7209941 AAACTAACAAAATT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561041 14 + 3907144 AAACTAACAAAATT i colAng1.NW_012123265v1 C 0 C 0 s proCoq1.NW_012152729v1 2965267 14 + 9850184 AAACAAACAAACTT i proCoq1.NW_012152729v1 I 17 C 0 s otoGar3.GL873566 13739572 10 + 13852661 ----AAATAAACTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80488316 10 + 88915250 ----AAATAAACTC i canFam3.chr5 C 0 C 0 e micMur3.chr20 54957608 1299 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e dasNov3.JH569970 954422 713 + 1009443 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=445125.000000 s hg38.chr16_GL383557v1_alt 78008 53 + 89672 CCCATAACCCACAACTATTTGGAAAAGGGAAAAATTTCCCCAGAAACTGAACT s panTro5.chr16 21509497 53 - 81586097 CCCATAACCGACAACTATTTGGAAAAGGGAAAAATTTCCCCAGAAACTGAACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570641 53 - 90481686 CCCATAACCGACAACTATTTGGAAAAGGGAAAAATTTCCCCAGAAACTGAACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803870 53 + 3010529 CCCATAACCCACAACTATTTGGAAAAGGGAAAAATTTCCCCAGAAACTGAACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922307 53 + 163208435 CTCATAACCCACAACTATTTGGAAAAGGGAGAAATTTCCCCAGAAACTGAACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389646 53 - 74971481 CCCATAACCCACAACTAATTAGAAAAGGGAAAAATTCCCCCAGAAACTGAACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102286 53 - 78541002 CCCATAACCCACAACTAATTGGAAAAGGGAAAAATTCCCCCAGAAACTGAACT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822514 53 + 43916225 CCCATAACCCACAACTAATTGGAAAAGGGAAAAATTCCCCCAGAAACTGAACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253693 53 + 75399963 ACCATAACCCACAACTAATTGGAAAAGGGAAAAATTCCCCCAGAAACTGAACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820295 53 - 7209941 CCCATAACCCACAACTAATTGGAAAAGGGAAAAATTCCCCCAGAAACTGAACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561055 53 + 3907144 CCCATAACCCACAACTAATTGGAAAAGGGAAAAGTTCCCCCAGAAACTGAACT i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54958907 53 + 72247402 CCCATAAACCACAACTATGTGGAAAAGGGAATGATTTCCTCAGAGAATGAACT i micMur3.chr20 I 1299 I 186 s proCoq1.NW_012152729v1 2965281 53 + 9850184 CCCATAAACCACAACTATGTGGAAAACGGAATGATTTCCCTAGAGACTGAACT i proCoq1.NW_012152729v1 C 0 I 191 s otoGar3.GL873566 13739582 53 + 13852661 CCTATAAACCACAACTATGTGGAGAAAGGCATGATTTTTCTGGAGACTAAACT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80488326 53 + 88915250 CCCATAAACCACAACTATCTGGAAAAGGGAATGATGACCCCAGAAAGTGAAGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955135 52 + 1009443 CCCAGAAACCACAACCATCTTCAAAA-GAAATTATTTGCCCAGGAACTCAATT i dasNov3.JH569970 I 713 C 0 e mm10.chr8 22493937 752 - 129401213 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=465467.000000 s hg38.chr16_GL383557v1_alt 78061 80 + 89672 AGGTGTGCTGCTGCATATCTCCT----GC-CCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGGT s panTro5.chr16 21509550 80 - 81586097 AGGTGTGCTGCTGCATATCTCCT----AC-CCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570694 80 - 90481686 AGGTGTGCTGCTGCATATCTCCT----AC-CCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 803923 80 + 3010529 AGGTGTGCTGCTGCGTATCTCCT----AC-CCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922360 80 + 163208435 AGGTGTGCTGCTGCATATCTCCT----AC-CCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389699 80 - 74971481 AGGTGTGCTGCTGCATATCTCCT----ACCCCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102339 80 - 78541002 AGGTGTGCTGCTGCATATCTCCT----ACCCCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGG- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822567 80 + 43916225 AGGTGTGCTGCTGCATATCTCCT----ACCCCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253746 84 + 75399963 AGGTGTGCTGCTGCATATCTCCTACACACACCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820348 80 - 7209941 AGGTGTGCTGCTGCATATCTCCT----ACCCCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAGG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561108 80 + 3907144 AGGTGTGCTGCTGCATATCTCTT----ACCCCCCATAAATGTCTTTGC-A-GTGGCTTGCCTCAAAAACAGAAGG---AATGAAGAAAG- i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739635 73 + 13852661 CAGGATGTTGCTGCAAATCTCAC----AC-CCCCAGAAATGTCTTTGC-ACAAGATTTGTCTTGTAAACA-----------GAAGAAGGT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80488379 82 + 88915250 AGGAG---TGCTATAAATCTCTT----GGTTCCTGTAAATGTCTTTGTGA-GAGGCTTACCTCAAAAATAGAGGGAAAAACAAAGAAGGT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955187 74 + 1009443 AGCAGTGCTGCTGCAAATCTCTT----GC-CCTTGTCAATGTATTTGCAA-GAGGCTTATCTCAGAAACAGAAAG---AAGGT------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=65256.000000 s hg38.chr16_GL383557v1_alt 78141 10 + 89672 AGCTACAGAA s panTro5.chr16 21509630 10 - 81586097 AGCTACAGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570774 10 - 90481686 AGCTACAGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804003 10 + 3010529 AGCTACAGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922440 10 + 163208435 GGCTACAGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389779 10 - 74971481 AGCTACAGAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102419 10 - 78541002 AGCTACAGAA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822647 10 + 43916225 AGCTACAGAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253830 10 + 75399963 AGCTACAGAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820428 10 - 7209941 AGCTACAGAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561188 10 + 3907144 AGCTACAGAA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739708 10 + 13852661 AGCTATAGAA i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 955261 10 + 1009443 AGCTACCAGA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=57221.000000 s hg38.chr16_GL383557v1_alt 78151 10 + 89672 AGTCCTACAA s panTro5.chr16 21509640 10 - 81586097 AGTCCTACAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570784 10 - 90481686 AGTCCTACAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804013 10 + 3010529 AGTCCTATAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922450 10 + 163208435 AGTCCTAGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389789 10 - 74971481 AGTCCTACAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102429 10 - 78541002 AGTCCTACAA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822657 10 + 43916225 AGTCCTACAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253840 10 + 75399963 AGTCCTACAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820438 10 - 7209941 AGTCCTACAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561198 10 + 3907144 AGTCCTACAA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13739718 10 + 13852661 AGTCTTACAA i otoGar3.GL873566 C 0 I 610 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I a score=103275.000000 s hg38.chr16_GL383557v1_alt 78161 23 + 89672 TATCTCCATGTCCCAGATGGTTA s panTro5.chr16 21509650 23 - 81586097 TATCTCCATGTCCCAGATGGTTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570794 23 - 90481686 TATCTCCATGTCCCAGATGGTTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804023 22 + 3010529 TATCTCCATGTCCCAGATGGTT- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922460 22 + 163208435 TATCTCCATGTCCCAGATGGTT- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389799 22 - 74971481 TATCTCCATGTCCCAGATGGTT- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102439 22 - 78541002 TATCTCCATGTCCCAGATGGTT- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822667 22 + 43916225 TATCTCCATGTCCCAGATGGTT- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253850 22 + 75399963 TATCTCTATGTCCCAGATGGTT- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820448 22 - 7209941 TATCTCCATGTCCCAGATGGTT- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561208 22 + 3907144 TATCTCCATGTCCCAGATGGTT- i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e saiBol1.JH378225 6373302 0 + 6628207 C e calJac3.chr20 21558152 614 - 44557958 I e otoGar3.GL873566 13739728 610 + 13852661 I a score=-155.000000 s hg38.chr16_GL383557v1_alt 78184 4 + 89672 AAAA s panTro5.chr16 21509673 4 - 81586097 AAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570817 4 - 90481686 AAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804045 3 + 3010529 -AAA i gorGor5.CYUI01000018v1 C 0 C 0 s cerAty1.NW_011999143v1 20822689 2 + 43916225 --AA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253872 1 + 75399963 ---A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820470 1 - 7209941 ---T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561230 1 + 3907144 ---A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21558766 4 - 44557958 aaaa i calJac3.chr20 I 614 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e rheMac8.chr20 21389821 0 - 74971481 C e macFas5.chr20 21102461 0 - 78541002 C e saiBol1.JH378225 6373302 0 + 6628207 C e otoGar3.GL873566 13739728 610 + 13852661 I e nomLeu3.chr2 53922482 0 + 163208435 C a score=423105.000000 s hg38.chr16_GL383557v1_alt 78188 79 + 89672 --AAAAAAAAAGGCAGGggctgggcacagtggctcacgcctgtaagcccagcactttgggaggccgaggcgggcgtatcac s panTro5.chr16 21509677 78 - 81586097 --AAAAAAAGGGG-GGGggctgggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcgtatcac i panTro5.chr16 C 0 C 0 s panPan2.chr16 21570821 77 - 90481686 --AAAAAAGGGGG--GGggctgggcgcggtggctcacacctgtaatcccagcactttgggaggccaaggcgggcgtatcac i panPan2.chr16 C 0 M 313 s gorGor5.CYUI01000018v1 804048 77 + 3010529 --AAAAAAGGGGG--GAggctgggtgcggtggctcacgcctataagcccagcactttgggaggccaaggcgggcgtatcat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922482 77 + 163208435 --AAAAAAAAGGG--GGggctgggcgcggtggctcacgcttgtagtcccagcacttcgggaggctgaggcgggcggatcac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389821 77 - 74971481 --AAAAAAAAAGC--GGggctgggtatggtggctcacgcctgtaatcccagcactttgggaggccaaggtggcagtatcac i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102461 77 - 78541002 --AAAAAAAAAGG--GGggctgggtatggtggctcacgcctgtaatcccagcactttgggaggccaaggtggcagtatcac i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822691 77 + 43916225 --AAAAAAAAAGG--GGggctgggtacggtggctcacgcctgtaatcccagcactttgggaggccaaggtggcagtatcac i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253873 77 + 75399963 --AAAAAAAGGGG--GGggctgggtacggtggctcatgcctgtaatcccaacactttgggaggccgaggtggcagtatcac i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820471 77 - 7209941 --AAAAAAAAAGG--GGggctgggtatggtggctcatgcctgtaatcccagcactttgggaggccaaggtggcagtatcac i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561231 77 + 3907144 --AAAAAAAAGGG--GGggctgggcgcggtggctcacgcctgtaatcccagcactttggaaggctgaggtggcagtatcac i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21558770 76 - 44557958 --atacaaaaaat---tagctgggcacggtggcgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaattgc i calJac3.chr20 C 0 I 2 s saiBol1.JH378225 6373302 79 + 6628207 aaaaacaaaaaCT--AGggccaggcgcagtggctcaagcctgtaatcccagcactttgggaggccgaggcgggtggatcac i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=721176.000000 s hg38.chr16_GL383557v1_alt 78267 161 + 89672 gaagtcaggagatcaaga-------------------------------c---catcctggttaacaca-gtgaaaccccacctctactaaaa-------------ata-aaaaaattagccgggcgtggtggt---gggcacctgtagtcccagccactcggaaggctgaggcaggagaatggcatgaacctgggaggcggagcttgc----agtg s panTro5.chr16 21509755 162 - 81586097 gaagtcaggagatcaaga-------------------------------c---catcctggttaacaca-gtgaaaccccacctctactaaaa-------------atacaaaaaattagccgggcgtggtggt---gggcacctgtagtcccagccactcggaaggctgaggcaggagaatggcatgaacctgggaggcggagcttgc----agtg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804125 162 + 3010529 gaagtcaggagatcaaga-------------------------------c---catcctggttaacaca-gtgaaaccccacctctactaaaa-------------atacaaaaaattagccgggcgtggtggt---gggcacctgtagtcccagccactcggaaggctgaggcaggagaatggcgtgaacctggaaggcggagcttgc----agtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922559 162 + 163208435 gaggtcaggagatcgaga-------------------------------c---catcctggctaacaca-gcgaaactccgtctctactaaaa-------------atacaaaaaattagccgggcgtggtggt---gggcacctgcagtcccagctactcagaaggctgaggcaggagaatggcgtgaacctgggaggtggagcttgc----agtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21389898 164 - 74971481 aaggtcgggagatcaaga-------------------------------ccatcatcctagctaacaca-gtgaaaccctgtctctactaaga-------------atacaaaaaattagccgggtgtggtggtggcgggcacctgtagtctcagctacttggaaggccgaggcaggagaatggcgtgaacctgggaggcggagcttgg-------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102538 164 - 78541002 aaggtcgggagatcaaga-------------------------------ccatcatcctagctaacaca-gtgaaaccctgtctctactaaga-------------atacaaaaaattagccgggtgtggtggtggcgggcacctgtagtctcagctacttggaaggccgaggcaggagaatggcgtgaacctgggaggcggagcttgg-------- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822768 164 + 43916225 aaggtcgggagatcaaga-------------------------------ccatcatcctagctaacaca-gtgaaaccctgtctctactaaga-------------atacaaaaaattagccgagtgtagtggtggcgggcacctgtagtctcagctacttggaaggctgaggcaggagaatggcatgaacctgggaggcggagcttgg-------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58253950 161 + 75399963 aaggtcgggagatcaaga-------------------------------c---catcctagctaacaca-gtgaaaccctgtctctactaaga-------------atacaaaaaattagccgggtatggtggtggcgggcacctgtagtctcagctacttggaaggccgaggcaggagaatggcgtgaacctgggaggcggagcttgg-------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820548 164 - 7209941 aaggtcgggagatcaaga-------------------------------ccatcatcctagctaacaca-gtgaaaccctgtctctactaaga-------------atacaaaaaattagccgggtgtggtggtggcgggcacctgtagtctcagctacttggaaggccgaggcaggagaatggcgtgaacctgggaggcggagcttgg-------- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 561308 165 + 3907144 aaggtcgggagatcaaga-------------------------------c---catcctggctaacaca-gtgaaaccctgtctctactaaga-------------atacaaaaaattagccgggtgtggtggtggcgggcacctgtagtctcagctacttggaaggccgaggcaggagaatggcgtgaacctgggaggcggagcttggagtg---- i colAng1.NW_012123265v1 C 0 M 626 s calJac3.chr20 21558848 207 - 44557958 gaacccaggtggcggagattgtggtgagccgagatcgcgccactgcactc---cagcctgggtaacaagagcgaaactccatctcaaaaaaaaaacaaaaacaaacaaaaaaacaagtagctgagtgtgatggc---gcacacctgtggttccagtgactcaggaggctgagatgagagaactgtttaagctcaggaagcaaaggttac----agtg i calJac3.chr20 I 2 C 0 s saiBol1.JH378225 6373381 162 + 6628207 gaggtcaagagatcgaga-------------------------------c---catcctggtcaacatg-gtgaaaccccatctctactaaaa-------------atataaaaaattagctgggcatggtggc---gcgtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcctgaacccaggaggcggaggttga----ggtg i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e panPan2.chr16 21570898 313 - 90481686 M e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=250500.000000 s hg38.chr16_GL383557v1_alt 78428 98 + 89672 -agtggagtcgcaccactgcactccagcctgggcgac-agagagagactcagtctc-------------aaaaaaaaaaaaaaagaaaaaaaaaGGAC-------------------------------------------CACAAAgctgagcgt------------------- s panTro5.chr16 21509917 97 - 81586097 -agtggagtcgcaccactgcactccagcctgggcgac-agagtgagactcagtctc--------------aaaaaaaaaaaaaagaaaaaaaaaGGAC-------------------------------------------CACAAAgctgagcgt------------------- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804287 105 + 3010529 -agtggagtcgcaccactgctctccagcctcggcgac-agagtgagactcagtctc------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGAC-------------------------------------------CACAAggctgagcgt------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922721 86 + 163208435 -agtggagctatgccactgcactccagcctgggcgac-agagtgagacttcgtctc-------------------------aaaaaaaagaaaaCGAC-------------------------------------------TACAAgactgagcac------------------- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390062 86 - 74971481 -agtggagttgcaccactgcactccagcctgggtgac-agagtgagcctccgtctc-------------------------aaaaaaaaaaaaaGGCC-------------------------------------------TACAAgactgagcgt------------------- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102702 86 - 78541002 -agtggagttgcaccactgcactccagcctgggtgac-agagtgagcctccgtctc-------------------------aaaaaaaaaaaaaGGCC-------------------------------------------TACAAgactgagcgt------------------- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20822932 89 + 43916225 -agtggagttgcaccactgcactctagcctgggtgac-agagtgagcctccgtctc----------------------aaaaaaaaaaaaaaaaGGCC-------------------------------------------TACAAgactgagcgt------------------- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254111 90 + 75399963 -agtggagttgcaccactgcactccagcctgggtgac-agagtgagcctccgtctc---------------------caaaaaaaaaaaaaaaaGACC-------------------------------------------TACAAgactgagcgt------------------- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820712 88 - 7209941 -agtggagttgcaccactgcactccagcctgggtgac-agagtgagcctccgtctc-----------------------aaaaaaaaaaaaaaaGGCC-------------------------------------------TACAAgactgagcgt------------------- i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559055 158 - 44557958 aggcaagatcacgccactgcaatccagtctgggtgat-agagcaagaccttatctc-----------aaaaacaaaaacaagagaaataaaaTAGGATCAGTG-----AATAGGCTAGAATGACCCAAATGGAAATAAAAGGACATGATTAAGAAGCTACTGTAGggacaggtgc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373543 170 + 6628207 agccgagaccgcgccattgcactccagcctgggtaacaagagcgaaactccgtctcaacaaaaaaaaaaaaaaaaaaactaaagaaaTAAAATAGGAT-----CAGTGAATAGGCTAGAATGACCCAAATGGAAATAAAAGGACAGGATTAAGAAGCTACTGTAGgggcaggtgc i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e cebCap1.NW_016107433v1 3355832 799 - 5917169 I e panPan2.chr16 21570898 313 - 90481686 M e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=145421.000000 s hg38.chr16_GL383557v1_alt 78526 28 + 89672 ggtggctcacacttgtaataccagcact s panTro5.chr16 21510014 28 - 81586097 ggtggctcacacttgtaatcccagcact i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804392 28 + 3010529 ggttgctcacacttgtaatcccagcact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922807 28 + 163208435 ggtggctcacgcttataatcccagcact i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390148 28 - 74971481 ggtggctcatgcctataatcccagcact i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102788 28 - 78541002 ggtggctcatgcctataatcccagcact i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823021 28 + 43916225 ggtggctcatgcctataatcccagcact i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254201 28 + 75399963 ggtggctcatgcctgtaatcccagcact i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820800 28 - 7209941 gatggctcatgcctataatcccagcact i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559213 28 - 44557958 agtggctcacacctgtaatctcagcact i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373713 28 + 6628207 agtggcccacgcctgtaatctcagcact i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356631 28 - 5917169 ggtggctcacgcctgtaatttcagcact i cebCap1.NW_016107433v1 I 799 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e panPan2.chr16 21570898 313 - 90481686 M e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=678110.000000 s hg38.chr16_GL383557v1_alt 78554 108 + 89672 ttgggaggctgaggcgggcagatcacctgaggttgggagttccgagatcagcctgaccaacatggaaaaacccagtctctact-aaagatataaaattagctgagcgcg s panTro5.chr16 21510042 108 - 81586097 ttgggaggctgaggcgggcagatcacctgaggttgggagttccgagatcagcctgaccaacatggaaaaacccagtctctact-aaagatataaaattagccaagcgcg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571224 108 - 90481686 ttgggaggctgaggcgggcagatcacctgaggttgggagttccgagatcagcctgaccaacatggaaaaacccagtctctact-aaagatataaaatcagccaagcgcg i panPan2.chr16 M 313 C 0 s gorGor5.CYUI01000018v1 804420 108 + 3010529 ttgggaggctgaggcgggcagatcacctgaggttgggagttccgagatcagcctgaccaacatggaaaaacccagtctctact-aaagatataaaattagccgagcgcg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922835 108 + 163208435 ctgggaggccgaggcgggcagatcacctgagggtgggagttctgagaccagcctgaccaacaaggagaaacccagtctctact-aaagacacaaaattagccgagcgcg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390176 108 - 74971481 ttgggaggccgaggcaagcagattacctgaggttgggagttccgagaccagcctgaccaacatggagaaacccagtctctact-aaagatacaaaattagccaagtgcg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102816 108 - 78541002 ttgggaggccgaggcaagcagattacctgaggttgggagttccgagaccagcctgaccaacatggagaaacccagtctctact-aaagatacaaaattagccaagtgcg i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823049 108 + 43916225 ttgggaggccgaggcaagcagattacctgaggttgggagttccgagaccagcctgaccaacatggagaaacccagtctctact-aaagatacaaaattagccaagcgcg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254229 108 + 75399963 ttgggaggccgaggcaagcagattacctgaggttgggagttccgagaccagcctgaccaacatggagaaacccagtctctact-aaagatacaaaattagccaagcaca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820828 108 - 7209941 ttgggaggccgaggcaagcagattacccgaggttgggagttccgagaccagcctgaccaacatggagaaacccagtctctact-aaagatacaaaattagccaagcgtg i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559241 108 - 44557958 ttgggaggctgaggcgggcagatcacctgaggttgggagttc-aagaccaacccaaccaacatggagaaaccccatctctaccaaaaaatacaaaattagctgggtgta i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373741 107 + 6628207 ttgggaggctgaggcaagcagatcacctgaggttgggagttc-aagaccaacccgaccaacatggagaaaccccgtctctact-aaaaatacaaaattagctgggtgca i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356659 107 - 5917169 ttgggaggctgaggtgggcagatcacctgagattgggagttc-aagaccaacccgaccaacatggagaaaccccgtctctact-aaaaatacgaaattagctgggtgta i cebCap1.NW_016107433v1 C 0 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e aotNan1.NW_018500622v1 9308439 511 - 10531588 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=862634.000000 s hg38.chr16_GL383557v1_alt 78662 137 + 89672 gtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtggtgagccgagatcgcgccattgcactccagcctgggcaacaagagc-aaactc--tgtctc-----a s panTro5.chr16 21510150 137 - 81586097 gtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtggtgagccgagatcgcgccattgcactccagcctgggcaacaagagc-aaactc--tgtctc-----a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571332 136 - 90481686 gtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgtggtgagccgagatcgcgccattgcactccagcctgggcaacaagagc-aaactc--tgtctc------ i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804528 137 + 3010529 gtggcgcatgcctgtaatcccagctactcgggaggctgaggcaggagaattccttgaacccgggaggtggaggttgtggtgagccgagatcgcgccattgcactccagcctaggcaacaagagc-aaactc--tgtctc-----a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53922943 142 + 163208435 gtggcgcatgccagtaatcccagctactcaggaggctgaggcaggagaattgctcgaacccgggaggtggaggttgtggtgagccgagatcgtgccactgcactccagcctgggcaacaagagc-aaactc--tgtcgcaataaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390284 139 - 74971481 gtggcacatgcctgtaatcccagctactcgggagactgaggtaggagaatcgcttgaacccgggaggtggaggttgcggtgagccaagatcacgccactgcactccagtctgggcaacaagaacaaaattc--tgtctc----aa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21102924 139 - 78541002 gtggcacatgcctgtaatcccagctactcgggagactgaggtaggagaatcgcttgaacccgggaggtggaggttgcggtgagccaagatcacgccactgcactccagtctgggcaacaagaacaaaattc--tgtctc----aa i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823157 138 + 43916225 gtggcacatgcctgtaatcccagctactcaggagactgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcacgccactgcactccagtctgggcaacaagaacaaaattc--tgtctt-----a i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254337 141 + 75399963 gtggcacatgcctgtaatcccagctacttgggaggctgaggcagaagaatcgcttgaacccgggaggtggaggttgtggtgagccaagatcacaccactgcactccagtctgggcaacaagagcaaaattc--tgtctc--aaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6820936 139 - 7209941 gtggcacatgcctgtaatcccagctactcgggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcggtgagccaagatcacgccactgcactccagtctgggcaacaagaacaaaattc--tgtctc----aa i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559349 112 - 44557958 gtggtgc------------------atgcaggaagctgaggcagaagaatcacttgaacctgggaggtggaggttgtggtgagccaagattgacccactgcactccagcctggg------gagtgaaactc--tgtct------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373848 131 + 6628207 ctggtgcatgcttgtaatcccagctatgcaggaagctgaggcaggagaatcacttgaacctgggaggtggaggttgtggtgagccaagattgacccaatgcactccagcctggg------gagtgaaactc--tgtctG------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356766 129 - 5917169 gtggtgcatgcttgtaatcctagctatgcaggaagctgaggcaggagaatcacttgaacctgggaggtggaggttgtggtgagccaagacggacccagtgtactccagcctggg------gagtgaaactc----tcgg------ i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9308950 132 - 10531588 gtggtgcatgcttgtaatcccagctatgcaggaagctgaggcaggagaatcacttgaacctgggaggtggaggttgtggtgagccaagattgacccattgcactccagcctggg------gagtgaaactctctgtct------- i aotNan1.NW_018500622v1 I 511 C 0 e canFam3.chr5 80488461 0 + 88915250 C e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=72512.000000 s hg38.chr16_GL383557v1_alt 78799 13 + 89672 aaaaaaaaaaaaa s panTro5.chr16 21510287 13 - 81586097 aaaaaaaaaaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571468 9 - 90481686 ----aaaaaaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804665 13 + 3010529 aaaaaaaaaaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923085 13 + 163208435 aaaaaaaaaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390423 13 - 74971481 aaaaaaaaaaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103063 13 - 78541002 aaaaaaaaaaaaa i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823295 13 + 43916225 aaaaaaaaaaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254478 13 + 75399963 aaaaaaaaaaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821075 13 - 7209941 aaaaaaaaaaaaa i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559461 12 - 44557958 -gggggaaaaaaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373979 12 + 6628207 -GGGGGAAAAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356895 12 - 5917169 -gggaaaaaaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309082 12 - 10531588 -ggggggaaaaaa i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80488461 13 + 88915250 AAGTAATGACACA i canFam3.chr5 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e dasNov3.JH569970 955271 0 + 1009443 C e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=143898.000000 s hg38.chr16_GL383557v1_alt 78812 15 + 89672 aGTCCTACAAATTTG s panTro5.chr16 21510300 15 - 81586097 aGTCCTACAAATTTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571477 15 - 90481686 aGTCCTACAAATTTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804678 15 + 3010529 aGTCCTACAAATTTG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923098 15 + 163208435 aGTCCTACAAACTTG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390436 15 - 74971481 aGTCCTACAAATTTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103076 15 - 78541002 aGTCCTACAAATTTG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823308 15 + 43916225 aGTACTACAAATTTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254491 15 + 75399963 aGTCCTACAAATTTG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821088 15 - 7209941 aGTCCTACAAATTTG i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559473 15 - 44557958 aGTCCTACAAATTTG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6373991 15 + 6628207 ATTCCTACAAATTTG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356907 15 - 5917169 aTTCCTACAAATTTG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309094 15 - 10531588 aGTGCTACAAATTTG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80488474 15 + 88915250 AGTCCTACAGATTTG i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 955271 15 + 1009443 AGTCCTACATATTGT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M e otoGar3.GL873566 13739728 610 + 13852661 I a score=325488.000000 s hg38.chr16_GL383557v1_alt 78827 46 + 89672 CC---GAGCGTGAGCTGTGTTCAGAG-CTTGTGGGACAGGGGGACACAGG s panTro5.chr16 21510315 46 - 81586097 CC---GAGCGTGAGCTGTGTTCAGAG-CTTGTGGGACAGGGGGACACAGG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571492 46 - 90481686 CC---CAGCGTGAGCTGTGTTCAGAG-CTTGTGGGACAGGGGGACACAGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804693 46 + 3010529 CT---GAGCGTGAGCTGTGTTCAGAG-CTTGTGGGACAGGGGGACACAGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923113 46 + 163208435 CC---AAGCATGAGCTGTGCTCAGAG-CTTATGGGACAGGGGGACACAGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390451 47 - 74971481 CC---AAGCGTGAGCTGTGTTCAGAGCCTTGTGGGACAGGGGGACAAAGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103091 47 - 78541002 CC---AAGCGTGAGCTGTGTTCAGAGCCTTGTGGGACAGGGGGACAAAGG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823323 47 + 43916225 CC---AAGCGTGAGCTGTGTTCAGAGCCTTGTGGGACAGGGGGACACAGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254506 47 + 75399963 CC---AAGCGTGAGCTGTGTTCAGAGCCTTGTGGGACAGGGGGACACAGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821103 47 - 7209941 CC---AAGCGTGAGCTGTGTTCAGAGCCTTGTGGGACAGGGGGACACAGG i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21559488 39 - 44557958 CC---AAGTGTGAGCTGTGTTCAGAGCCCTGTGGGACACAGA-------- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374006 39 + 6628207 CC---GAGCATGAGCTGTGTTCACAGCCCTGTGGGACACAGG-------- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356922 39 - 5917169 CC---GAGCGTGAGCTGTGTTCAGAGCCCTGTGGGACACAGA-------- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309109 39 - 10531588 CT---GAGCGTGAGCTGTGTTCAGAGCCCTGTGGGACACAGA-------- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13740338 47 + 13852661 cc---aaccATGACCTGTGCTCAGCATCTCCTGGGACAGAGGGACAGTGG i otoGar3.GL873566 I 610 C 0 s canFam3.chr5 80488490 36 + 88915250 CCAGGAAGTGTGAGCTGTACTCAGG--CTAATGGGAGA------------ i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 955286 41 + 1009443 CC---AAGTGTTAGCTATATTCAGAGTCTTAAGGGGAGGAGGAG------ i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M e colAng1.NW_012123265v1 561473 626 + 3907144 M a score=29223.000000 s hg38.chr16_GL383557v1_alt 78873 2 + 89672 GA s panTro5.chr16 21510361 2 - 81586097 GA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571538 2 - 90481686 GA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804739 2 + 3010529 GA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923159 2 + 163208435 GA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390498 2 - 74971481 GA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103138 2 - 78541002 GA i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823370 2 + 43916225 GA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254553 2 + 75399963 GA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821150 2 - 7209941 GA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562099 2 + 3907144 GA i colAng1.NW_012123265v1 M 626 C 0 s calJac3.chr20 21559527 2 - 44557958 GA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374045 2 + 6628207 GA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356961 2 - 5917169 GA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309148 2 - 10531588 GA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13740385 2 + 13852661 GA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80488526 2 + 88915250 GA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955327 2 + 1009443 GA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e mm10.chr8 22493937 752 - 129401213 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M a score=20385.000000 s hg38.chr16_GL383557v1_alt 78875 2 + 89672 TG- s panTro5.chr16 21510363 2 - 81586097 TG- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571540 2 - 90481686 TG- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804741 2 + 3010529 TG- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923161 2 + 163208435 TG- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390500 2 - 74971481 TG- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103140 2 - 78541002 TG- i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20823372 2 + 43916225 TG- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254555 2 + 75399963 TG- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821152 2 - 7209941 TG- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562101 2 + 3907144 TG- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21559529 2 - 44557958 TG- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374047 2 + 6628207 TG- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356963 2 - 5917169 TG- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309150 2 - 10531588 TG- i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13740387 2 + 13852661 TA- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22494689 2 - 129401213 TG- i mm10.chr8 I 752 I 6 s canFam3.chr5 80488528 2 + 88915250 TG- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955329 2 + 1009443 -GG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I e macNem1.NW_012011355v1 14495185 1629 + 26466322 M a score=384350.000000 s hg38.chr16_GL383557v1_alt 78877 35 + 89672 GGGAGA-----TGAGGGGTTAGCAGGGGCTTGGAATGGAC s panTro5.chr16 21510365 35 - 81586097 GGGAGA-----TGAGGGGTTAGCAGGGGCTTGGAATGGAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571542 35 - 90481686 GGGAGA-----TGAGGGGTTAGCAGGGGCTTGGAATGGAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804743 35 + 3010529 GGGAGA-----TGAGGGGTTAGCAGGGGCTTGGAACGGAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923163 35 + 163208435 GGGAGA-----TGAGGGGTTAGCAGGGGCTTGGAATGGAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390502 35 - 74971481 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103142 35 - 78541002 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14496814 35 + 26466322 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i macNem1.NW_012011355v1 M 1629 C 0 s cerAty1.NW_011999143v1 20823374 35 + 43916225 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254557 35 + 75399963 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821154 35 - 7209941 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562103 35 + 3907144 GGGAGA-----TGAGGGGTTGGCAGGGGCTTGGAATGGAC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21559531 35 - 44557958 GGGAGA-----TGAGGGGTTGGCAGGGGCTGGGAATAGAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374049 35 + 6628207 GGGAGA-----TGAGGGGTTGGCAGGGGTTGGGAATGGAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3356965 35 - 5917169 GGGAGA-----TGAGGGGTTGGCAGGGGCTCGGAATGGAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309152 35 - 10531588 GGGAGA-----TGAGGGGTTGGCAGGGGCTGGGAATGAAA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13740389 34 + 13852661 -GGGGA-----TGAGGGGTTGGCAGGGGGATGGGGGATAA i otoGar3.GL873566 C 0 I 1 s mm10.chr8 22494697 29 - 129401213 GGGAGAGATACTGAGGG--TGCCAGGGGGCT--------- i mm10.chr8 I 6 C 0 s canFam3.chr5 80488530 23 + 88915250 --GAGA---------------GTGGGGGCTAGGGAGTGAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955331 10 + 1009443 AGGATA-----TGAT------------------------- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54958960 186 + 72247402 I e proCoq1.NW_012152729v1 2965334 191 + 9850184 I a score=8603301.000000 s hg38.chr16_GL383557v1_alt 78912 485 + 89672 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACTTCCACCTTCTCCATGAGAGGACGAAAGACTAAGTGGGTGTCAGTGCCTGGG------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCATCCT-CACGAGAACAGCCAGAACTGGGCAGGGTAA--AGCAGCAGCCTCACCAGAGGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATCATGAGGGAGGTACACGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCC--GAGGCTTTCTGTCTCAGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT s panTro5.chr16 21510400 486 - 81586097 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTGCACCTTCTCCATGAGAGGACGAAAGACTAAGTGGGTGTCAGTGCCTGGG------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAACTGGGCAGGGTAA--AGCAGCAGCCTCACCAGCGGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATAATGAGGGAGGTACACGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCC--GAGGCTTTCTGTCTCGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21571577 486 - 90481686 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTGCACCTTCTCCATGAGAGGACGAAAGACTAAGTGGGTGTCAGTGCCTGGG------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAACTGGGCAGGGTAA--AGCAGCAGCCTCACCAGCGGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATCATGAGGGAGGTACACGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCC--GAGGCTTTCTGTCTCGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 804778 485 + 3010529 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGG------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAACTGGGCAGGGTAA--AGCAGCAGCCTCACCAGAGGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCATTGCTGTTAGATGTCACAGGGACGAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATCATGA-GGAGGTACACGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCT--GAGGCTTTCTGTCTCGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923198 488 + 163208435 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTCCCTGGG------AAAGCAA----------GGGAGAAGGTGTACAGAATTAAAAGTCGTCCTGCATGAGAACAGCCAGAACCGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCCGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATCATGAGGGAGGTACACGTAAGCAAAACAA-GGCCTGGATGGAAAAATATTCCCTGAGGTTTTCAGTCTCGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21390537 488 - 74971481 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGT------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAGCTGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAAGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCAGCAGCTTAGGCATAAA-------------------CCTATGC--CCAGAAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103177 488 - 78541002 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGT------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAGCTGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAAGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCAGCAGCTTAGGCGTAAA-------------------CCTATGC--CCAGAAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14496849 488 + 26466322 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGT------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCATGAGAACAGCCAGAGCTGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAAGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCAGCAGCTTAGGCGTAAA-------------------CCTATGC--CCAGAAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20823409 488 + 43916225 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGT------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAGTTGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAAGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCAGCAGCTTAGGCGTAAA-------------------CCTATGC--CCAGAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58254592 488 + 75399963 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGT------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCATCCTGCACGAGAACAGCCAGAGCTGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGAGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAGGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCGGCAGCTTAGGCGTAAA-------------------CCTGTGC--CCAGAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821189 488 - 7209941 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGT------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAGCTGGGCAGGGTAA--AGCAGCAGCCTCGCCAGGAGGGGAACCCACCTCCAGATATCAGCGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAAGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCAGCAGCTTAGGCGTAAA-------------------CCTATGC--CCAGAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562138 488 + 3907144 ACTTACATGCGGAAAGGTGATTTTTCGGAGAGCGGCATCGTAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTGGG------AAAGCAG----------GGGAGAAGGTGTACAGAATTAGAAGTCGTCCTGCACGAGAACAGCCAGAGCTGGGCAGGGTAA--AGCAGCAGCTTCGCCAGGAGGGGAACCCACCTCCAGATATCAGTGCTGTTGGGCTGTGGGCCACAGTGCGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTTCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGGAATTAAATCATGAGGGAGGTACATGTAAGCAAAACAA-GGTCTGGTTGGAAAAATATTCCCTGAGGTTTTCTGTCTCGGCAGCTTAGGCGTAAA-------------------CCTACGC--CCAGAAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21559566 483 - 44557958 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCAGCATCATAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTAGG------AATGCGG----------GGGAGAAGGTGTACAGAATTAGAAGTAATCCTG-ATGAGAACAGCCAGAGCCAGGAGGGGTAA--AGCAGCAGTCTTGCTG---GGAGAACCCACCTCCGGATATCAGCGATGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAATGGTTTTGTCCGAACCCACTGCTTCTCACCGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTCCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGG-ATTAAATCATGAGGGAGGCACATGTAACCAAAACAA-GGTCTGACTGGAAAAATACTCCCTGAGGTGTTCTGTCTGGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374084 487 + 6628207 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCAGCATCATAATTCTTTACCTCAACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTAGG------AATGGGG----------GGGAGAAGGTGTACAGAATTAGAAGTTATGCCGTATGAGAACAGCCAGAGCCAGGAGAGGTAA--AGCAGCAGCTTTGCTGGGAGGAGAACCCACCTCCGGATATCAGTGATGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAATGGTTTTGTCCGAACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTCCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAAG-ATTAAATCATGAGGGAGACACATGTAAGCAAAACAA-GGTCTGACTGGAAAAATACTCCCTGAGGTTTTCTGTCTGGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357000 487 - 5917169 ACTTACGTGGGGAAAGGTGATTTTTCGGAGAGCGGCATCATAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCGGTGCCTAGG------AATGAGG----------AGGAGAAGGTGTACAGAATTAGAAGTTATCCTACATGAGAACAGCGAGAGCCAGGAGGGGTAA--AGCAGCAGCCTTGCTGGGAGAAGAACCCACCTCCGGATATCAGCGATGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAATGGTTTGGTCCGAACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTGCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAAG-ATTAAATCATGAGGGTGGCACATGTAAGCAAAACAA-AGTCTGACTGGAAAAATACTCCCTGAGGTTTTCTGTCTGGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309187 487 - 10531588 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCAGCATCATAATTCTTTACCTCCAACTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCAGTGCCTAGG------AATGGCG----------AGGAGAAGGTGTACAGAATTAGAAATTATCGTGCATGAGAACAGCCAGAGCCAGGAGGGGTAA--AGCAGCAGCCTTGCTGGGAGGAGAACCCACCTCCGGATATCAGCGATGTTGGGCTGTGGGCCACAGTGCGCACGTCATGAGTGTGATGCTGGAATGGTTTTGTCCGAACCCACTGCTTCTCACTGCTGTTAGATGTCACAGGGACCAGCTGAAAATGGAAGACTGTCCCCTCGGCTGTGCCCACCACAAAACTGTCTTCTTGCTGAGG-ATTAAATCATGAGGGAGGCACATGTAAGCAAAACAA-GGTCTGACTGGAAAAATATTCCCTGAGGTTTTCTGTCTGGGCAGCTTAGGGGTAAA-------------------CCTATGC--CCAGAAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54959146 488 + 72247402 ACTTACATGGGGAAAGGTGATCTTTCGGAGAGCAGCATCATAATTCTTTACTTCTACCTTCTCCATGAGAGGACGAATGACTAGATGGGTGTCGGTGCCTAGGGCA---GGGGAAG----------GGGAGAAGGTATGCAGAATTACAAA---TCCTGCATGAAAATAACCAGGGACAGATAGAGCAG--AGAGGCAGCCTCACAGGAAGTGGAACCCACCTCCAGATATCAGAGCTGTCGGGCTGTGGGCCACAGCACGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCATTGCTGTTGGAAGTCACAGGGACCAGCTGAAAATGGAATACTGTCCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATCATAAGGGAGGTACATGTGATCAAAATAG-GGTGCAGCTGGAAAAATATTCCCTGAGGTTTTCTGTCTGGGCAGCTTAAGGGGAAA-------------------CTTATGC--CCAGAAT i micMur3.chr20 I 186 I 2309 s proCoq1.NW_012152729v1 2965525 489 + 9850184 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCAGCATCATAATTCTTTACTTCTACCTTCTCCATGAGAGGACGAATGACTAGATGAGTGTCGGTGCCTAGGGTAG--GGGGAAG----------GAGAGAAGGTATGCAGAATTAGAAG---TCCTGCGTGAAAATAACCAGGGATGGACAGAGCAA--AGAGGCAGCCTCACTGGAAGTGGAACCCACCTCCAGATATCAGAGCTGTTGGGCTGTGGGCCACGGCACGCACGTCGTGAGTGTGATGCTGGAACGGTTTTGTCCGCACCCACTGCTTCTCATTGCTGTTAGAAGTCACGGGGACCAGCTGAAAATGGAATATTGTCCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGGAATTAAATCATAAGGGAGGTACATGTGATCAAAACAG-GGTCCAGCTGGAAAAATATTCCCTGAGTTTTTCTATCTGGGCAGCTTAGGGGAAAA-------------------CCTATGC--CCAGAAT i proCoq1.NW_012152729v1 I 191 C 0 s otoGar3.GL873566 13740424 485 + 13852661 ACTTACATGGGGAAAGGTGATTTTTCGGAGAGCAGCGTCATAGTTCTTTACCTCTATCTTCTCCATGAGAGGACGAATAACTAAATGGGTGTCAGTGCCTGGGGCAG--AGAGAAG----------GGGAGAAGGTATGCAGAATTAGAAG---TCCTGAATGAAAATAACTAGAGATGGACAGA--AT--GGAGGCGGCCTTACCAGGAGTGTAACTCACCTCCAGAGATCAGAGCTGTTGGGCTGTGGGCCACAGCACGCACATCATGAGTGTGATGCTGGAATGGTTTTGTCCGCACCCACTGCTTCTCACTGCTGTTTGAAGTCACAGGGACCAGCTGAAAATGAAATACTGTGCCCTCGGCTGTGCCCACCACAAAACTGTCTTCATGCTATGGAATTAAATCATAGGGGAGGTATATGTGATCAAAACAG-GGTCCAACTGGAAAAATAGTCCCTGAGGTTTTCTG--TGGTCAGCTTAGGGAAAAA-------------------CCTATGT--CCACAAT i otoGar3.GL873566 I 1 C 0 s mm10.chr8 22494726 492 - 129401213 ACTCACATGGGGGAACGTGATCTTTCGGAGAGCAGCATCGTAATTCTTTACCTCCACTCTCTCCATGAGAGGCCGAATAACCAGGTGGGTGTCGGTGCCTGTG------GGAACAT----------GCGGTAAG------------AGATGGCTTTCATGAAGAGAACAGCCTGAGCCAGAACCGGCAGCCAGGAGCAGC--TGGCTGGGGGAGGACCTACCTCCTGAGATCAGGGCTGTTGGGCTGTGGGCCACAGCACGCACGTCATGAGTGTGATGCTGGAACGGTTTCGTCCGCACCCACTGCTTCTCACTGCTGTTGGAAGTCATGGACACCAGCTGGAAATGGAATACCGTGCCCTCGGCGGTGCCCACCACAAAACTGTCTTCTTGCTGAGAAATTAAATCATGAGGG-GATAGATGTCAACAAAACAT-A--CCAGACAGGAAAATATTCCTTCAGGTTTTCTATCTGGGCAGCTCAGGAGACAAAAAAAAAGTCAAAAAACCCCTCTTGC--CCTGAAT i mm10.chr8 C 0 C 0 s canFam3.chr5 80488553 487 + 88915250 ACTTACATGAGGAAAAGTGATTTTTCGGAGAGCAGCATCATAATTCTTAACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGTGTGTCTGTGCCTAGGGCAGGAAGAGCAGAGCGGGGGTAGGGAGAAGGCAT-CAGAATTAGAAAAAGTCCTGCATG----------------GCCTGGGTAA--AGCAGCAGCCTGGCAGAGAGTGCAACCTACCTCCAGATATCAATGCTGTCGGGCTGTGGGCCACGGCTCGAACGTCATGTGTATGATGCTGGAATGGCTTTGTCCGCACCCACTGCTTCTCACTGCTGTTGGAAGTCACAGAGACCAGCTGAAAATGGAATACTGTCCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTGCTGAGAAATTAAATCATTAGGGAGGTACATTTAAGCAAAACAG-GGCCCAGTTTGAAAAATATTCCCTGAGGTTTTCTGTCTGCACAGCCTAGGGGAAAA-------------------CCTACAC--CCAGAAT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955341 482 + 1009443 ACTTACATGAGGGAAGGTGATTTTTCGGAGAGCAGCATCATAATTCTTTACCTCCACCTTCTCCATGAGAGGACGAATGACTAAGTGGGTGTCGGTGCCTGGGGTGG--GGAAGAG----------GGGAGAAGGCATACAGAATTAGAAAAACACCTGCCTTAAAATAACCAGAGCTGAGCAGGGTGA--AGAAACAGCCTCTCTGTAAGTGGTACCCACCTCCAGATATCAGTGCTGTTGGGCTGTGGGCCACAGCACGCACATCATGAGTGTGATGCTGGAAGGGCTTTGTCCGTACCCACTGCTTCTCACTGCTGTTAGAAGACACAGAGACCAGCTGAAAATGGAATACTGTCCCCTCGGCTGTGCCCACCACGAAACTGTCTTCTTCCTGAGAAATTAAATCA-------GGGACGTTTGAGCAAAAGAATGGCCCAGTCGGAAAAATATTCT--GAGGTTTTCTGTCT--GCAGCTTAGAGGAACA-------------------CATGTCTCGCCAGA-- i dasNov3.JH569970 C 0 C 0 a score=1014452.000000 s hg38.chr16_GL383557v1_alt 79397 76 + 89672 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCTTCCAGAAGCTAA---GGATT-CCATCAAAGGAGCAAGCTCAGACACTGGTA s panTro5.chr16 21510886 76 - 81586097 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCTTCCAGAAGCTAA---GGATT-CCATCAAAGGAGCAAGCTCAGACACTGGTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572063 76 - 90481686 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCTTCCAGAAGCTAA---GGATT-CCATCAAAGGAGCAAGCTCAGACACTGGTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805263 76 + 3010529 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCTTCCAGAAGCTAA---GGATT-CCATCAAAGGAGCAAGCTCAGACACTGGTA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923686 77 + 163208435 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCTTCCAGAAGCTAA---GGATTCCCATCAGAGGAGCAAGCTCAGACACTGGTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391025 76 - 74971481 CAGTAGGAAAGT-TATAAGGGTC-----TTTTCCCTCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGGTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103665 76 - 78541002 CAGTAGGAAAGT-TATAAGGGTC-----TTTTCCCTCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGGTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497337 76 + 26466322 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCCTCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGGTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20823897 76 + 43916225 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCCTCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGGTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255080 76 + 75399963 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCCTCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGGTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821677 76 - 7209941 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCCTCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGGTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562626 76 + 3907144 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCCATCCAGAAGCTAA---GGATT-CCATCAGAGGAGCAAGCTCAGACACTGATA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560049 75 - 44557958 CAGTAGGAAAGT-TACAAGGG-C-----TTTTCTCTCCAGAAGCTAA---AGATT-CCATTAGAGGAGCAAGGTCAGACACAGGTA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374571 76 + 6628207 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCTCTCCAGAAGCTAA---AGATT-CCATCAGAGGAGCAAGGTCAGACACAGGTA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357487 79 - 5917169 CAGTAGGAAAGT-TACAAGGGTC-----TTTTCTCTCCAGAAGCTAAAGGAGAGA-GCACCAGAGGAGCAAGGTCAGACACAGGTA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309674 76 - 10531588 CAGTAGGAAAGT-TATAAGGGTC-----TTTTCTCTCCAGAAGCTAA---AGATT-CCATCAGAGGAGCAAGGTCAGACACAGGTA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2966014 76 + 9850184 TAGAAAAGAGGT-TATAGGAGTC-----TTTTCCCTCCACAAGCTAA---CAATT-TCATCAGCCAAGCAAGTTCAGATACAGATG i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13740909 82 + 13852661 TAGAAGGGAGGTCCACAATTGTCCACAATTAGCTTCCTTTAAGCTAA---CAAAT-TTGTCAGCCAAGAAAGTTCAGCTATAGATG i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22495218 56 - 129401213 TAGCAGGGAGGC-T--------C-------------CCAG----TAG---CAGTT-CCATCAGAGAAGCAAGCTCAAACATGGGTA i mm10.chr8 C 0 C 0 s canFam3.chr5 80489040 75 + 88915250 TGGAAGGTAGGT-TAT-GGGGTC-----TTTTTCCTCCAGAAAGTGA---CAATT-CCATCAGAAGAGCAAGCTTACACATAGGTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 955823 76 + 1009443 TAAAAGGCAGGT-TGCAGGTGTC-----TTTGTCCTTGAGAAGCTAA---TGTTT-TCATCAGAGGAGCAAGCTCAGACATAGATA i dasNov3.JH569970 C 0 I 2 e micMur3.chr20 54959634 2309 + 72247402 I a score=361372.000000 s hg38.chr16_GL383557v1_alt 79473 27 + 89672 ACAATGCGCCCCCTACTGACAAAATT---A s panTro5.chr16 21510962 27 - 81586097 ACAACGCGCCCCCTACTGACAAAATT---A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572139 27 - 90481686 ACAACGCGCCCCCTACTGACAAAATT---A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805339 30 + 3010529 ACAATGCGCCCCCTACTGACAAAATTAACA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923763 30 + 163208435 ACAATGCGCCCCCTACTGACAAAACTAACA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391101 30 - 74971481 ACAATGCACCCCCTACTGACAAAATTAACA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103741 30 - 78541002 ACAATGCGCCCCCTACTGACAAAATTAACA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497413 30 + 26466322 ACAATGCGCCCCCTACTGACAAAATTAACA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20823973 30 + 43916225 ACAATGCGCCCCCTACTGACAAAATTAACA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255156 30 + 75399963 ACAATGCGCCCCCTACTGACAAAATTAACA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821753 30 - 7209941 ACAATGCGCCCCCTACTGACAAAATTAACA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562702 30 + 3907144 ACAATGCGCCCCCTACTGACAAAATTAACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560124 26 - 44557958 ACAATGCGCCCCCTACTGACAA----AACA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374647 29 + 6628207 ACAATGC-CCCCCTACTGATAAAATTAACA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357566 30 - 5917169 ACAATGCGCCCCCTACTGACAAAATTAACA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309750 30 - 10531588 ACAATGCGCCCCCTACTGGCAAAATTAACA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2966090 27 + 9850184 ACAAGGCGCCCTCTACCGACAAAATTA--- i proCoq1.NW_012152729v1 C 0 I 2787 s otoGar3.GL873566 13740991 27 + 13852661 ACAAGGTGCCCCCTACTGACAAAATGA--- i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22495274 27 - 129401213 GCCATGCGCCCCCTGCTGACAACATTA--- i mm10.chr8 C 0 I 1447 s canFam3.chr5 80489115 24 + 88915250 ATA---TGCTCCCTACTGACAAAATTA--- i canFam3.chr5 C 0 C 0 e micMur3.chr20 54959634 2309 + 72247402 I e dasNov3.JH569970 955899 2 + 1009443 I a score=577490.000000 s hg38.chr16_GL383557v1_alt 79500 66 + 89672 ACGTC--TACAG--------------T--ACAGCAACGC-TTCATATACCCAACATAGATCTCCTTAGAATAGCATTGAGAGAGA s panTro5.chr16 21510989 66 - 81586097 ACGTC--TACAG--------------T--ACAGCAACGC-TTCATATACCCAACATAGATCTCCTTAGAATAGCATTGAGAGAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572166 66 - 90481686 ACGTC--TACAG--------------T--ACAGCAACGC-TTCATATACCCAACATAGATCTCCTTAGAATAGCATTGAGAGAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805369 66 + 3010529 ACGTC--TACAG--------------T--ACAGCAACGC-TTCATATACCCAACATAGATCTCCTTAGAATAGCATTGAGAGAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923793 75 + 163208435 ATGTC--TACAGTAGGAAC-----AAT--ACAGCAATGC-TTCATATACCCAACATAGACCTCCTTAGAATAGCATTGAGAGAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391131 73 - 74971481 ACGTC--TAGAGTAGGAAC-----AAC--ACAGCAATGC-TTCATATATACAACACAGATCTCCTTAGAATAGCATT--GAGAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103771 73 - 78541002 ACGTC--TAGAGTAGGAAC-----AAC--ACAGCAATGC-TTCATATATACAACACAGATCTCCTTAGAATAGCATT--GAGAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497443 75 + 26466322 ACGTCTATAGAGTAGGAAC-----AAC--ACAGCAATGC-TTCATACATACAACACAGATCTCCTTAGAATAGCATT--GAGAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20824003 73 + 43916225 ACGTC--TAGAGTAGGAAC-----AAC--ACAGCAATGC-TTCATATATACAACATAGATCTCCTTAGAATAGCATT--GAGAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255186 73 + 75399963 ACGTC--TAGAGGAGGAAC-----AAC--ACAGCAATGC-TTCATACATACAACATAGATCTCCTTAGAATAGCATT--GAGAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821783 73 - 7209941 ACGTC--TAGAGTAGGAAC-----AAC--ACAGCAATGC-TTCATATATATAACATAGATCTCCTTAGAATAGCATT--GAGAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562732 73 + 3907144 ACGTC--TAGAGTAGGAAC-----AAC--ACAGCAATGC-TTCATATATACAACATAGATCTCCTTAGAATAGCATT--GAGACA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560150 73 - 44557958 ACGTC--TACAGTAGGAAC-----AAT--ACAGTAACAT-TTCATATACACAACCTAGATCTCCTTAAAATAGAACA--GAGAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374676 73 + 6628207 ACGTC--TACAGTAGGACC-----AAT--ATAGTAACGT-TTCATATACACAACCTAGATCTCCTTAAAATAGCAGA--GAGAGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357596 73 - 5917169 ACGTC--TACAGTAGGAAC-----AAT--ACAGTAACGT-TTCATATACACAACCTAGATCTCCTTAAAATAGCACA--GAGAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309780 72 - 10531588 ACGTC--TACAGTAGGAAC-----AAT--ACAGTAACAT-TTCATATACACAACCTAGATCT-CTTAAAATAGCACA--GAGAGA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13741018 71 + 13852661 --------ACAATATACAC-----ATCCAACTGTTAAGT-TTCGTATACATAAACTAGACCTCATCAAAATAGCAACCAAAGAGA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80489139 75 + 88915250 --------ACAGTATGTACCTCAAGCT--GTTATAGTGCTTTCAAATACACAAACTAGTTGCTACTAGAAAAGCAACAAAAggga i canFam3.chr5 C 0 I 3414 e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955899 2 + 1009443 I a score=1349167.000000 s hg38.chr16_GL383557v1_alt 79566 136 + 89672 GAAAATACCTAGGA-----------------CCTACTTGAG---AAATTTAAATCCTTCGAAAGAACATAAGAGAAAACCT-AACAAAGAAATTCA-TATCATGTTATTTAATACGAATATTTAACATGATCAAGTTATTATCACTAAAGAAATGTAT s panTro5.chr16 21511055 136 - 81586097 GAAAATACCTAGGA-----------------CCTACTTGAG---AAATTTAAATCCTTCGAAAGAACATAAGAGAAAACCT-AACAAAGAAATTCA-TACCATGTTATTTAATACGAATATTTAACATGATCAAGCTATTATCACTAAAGAAATGTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572232 136 - 90481686 GAAAATACCTAGGA-----------------CCTACTTGAG---AAATTTAAATCCTTCGAAAGAACATAAGAGAAAACCT-AACAAAGAAATTCA-TACCATGTTATTTAATACGAATATTTAACATGATCAAGCTATTATCACTAAAGAAATGTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805435 136 + 3010529 GAAAATACCTAGGA-----------------CCTACTTGAG---AAATTTAAATCCTTCGAAAGAACATAAGAGAAAACCT-AACAAAGAAATTCA-TACCATGTTATTTAATACAAATATTTAACATGATCAAGCTATTATCACTAAAGAAATGTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53923868 136 + 163208435 TAAAATACCTAGGA-----------------CCTACTTGAG---AAATTTAAATCCTTCGAAAGAACGTAAGAGAAAACCT-AACAAAGAAATCCA-TACCATGTTATTTAATACAAATATTTAACATGATCAAGCTATTATCGCTAAAGAAATGTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391204 137 - 74971481 TAAAATACCTAGAA-----------------CCTATTTGAG---AAATTTAAATCCTTCGAAAGATCATAAGAGAAAACCTAAACAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACATGATCAAGTTATTATCACTAAAGAAACGTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103844 137 - 78541002 TAAAATACCTAGAA-----------------CCTATTTGAG---AAATTTAAATCCTTCGAAAGATCATAAGAGAAAACCTAAACAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACATGATCAAGTTATTATCACTAAAGAAACGTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497518 137 + 26466322 TAAAATATCTAGAA-----------------CCTATTTGAG---AAATTTAAATCCTTCGAAAGATCATAAGAGAAAACCTAAACAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACATGATCAAGTTATTATCACTAAAGAAACGTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20824076 137 + 43916225 TAAAATACCTAGAA-----------------CCTATTTGAG---AAATTTAAATCCTTCGAAAGATCATAAGAGAAAACCTAAACAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACATGATCAAGTTATTATCACTAAACAAACGTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255259 137 + 75399963 TAAAATACCTAGAA-----------------CCTATTTGAG---AAATTTAAATCCTTCGAAAGAACATAAGAGAAAACCTAAACAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACACGATCAAGTTAATATCACTAAAGAAACGTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821856 137 - 7209941 TAAAATACCTAGAA-----------------CCTATTTGAG---AAATTTAAATCCTTCGAAAGATCATAAGAGAAAACCTAAACAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACATGATCAAGTTGTTATCACTAAAGAAACGTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562805 136 + 3907144 TAAAATACCTAGAA-----------------CCTATTTGAG---AAATTTAAATCTTTCGAAAGAGTATAAGAGAAAA-CTAAATAAAGAAATCCA-TAGCATGTTATTTAGTAGGAATATTTAACATGATCAAGTTATTATCACTAAAGAAACGTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560223 133 - 44557958 TAAAATAACTAGGA-----------------CCTATCTGAG---AAATTTAAATCCTTCTAAATAA----AGGGAAAACCTAAACGAATAAATCCA-TACCATATTCTTTAATAGGCATATTTAACATGATCAAAATATTATCACTAAAGAAATATGT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374749 137 + 6628207 TAAAATACCTAGGA-----------------CCTATCTGAG---AAATTTAAATCCTTCTAAAGAACATGAGGGAAAACCTAAACAAACAAATCCG-TACCATGTTCTTTAATAGGTATATTCAACATGATCAAAATATTATCACTAAAGAAATATAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357669 138 - 5917169 TAAAATACCTAGGA-----------------CCTATCTGAG---AAATTTAAATCCTTCTAAAGAACATAAGGGAAAACCTAAACAAACAAATCCGTTACCATGTTCTTTAATAGGTATATTTAACATGATCAAAATATTATCACTAAAGAAATATAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309852 137 - 10531588 TAAAATACCTAGGA-----------------CCTATCTGAG---AAATTTAAATCCTTCTAAAGAACATAAGGGAAAACCTAAACAAATAAATCCG-TACCATGTTCTTTAATAGGTATATTTAACATGATCAAAATATTATCACTAAAGAAACATAT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13741089 155 + 13852661 TAAAACAGCTAGGAATAAACAAGAAATGTACTAGATCTGAGAAAAAATTTAAATCCATCTAAAGAACATAAGAAATGATCTATACAAGGAAATCCA-TATCATATTCATTCATAGAAATTTTTAACATGATAAAGCTATTA--GCCAAGAAAACGTGT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955899 2 + 1009443 I a score=391615.000000 s hg38.chr16_GL383557v1_alt 79702 41 + 89672 TAAACCAATAAAAATACTGAAAATCCTTTATTTGGAACTAG s panTro5.chr16 21511191 41 - 81586097 TAAACCAATAAAAATACTGAAAATCCTTTATCTGGAACTAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572368 41 - 90481686 TAAACCAATAAAAATACTGAAAATCCTTTATCTGGAACTAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805571 41 + 3010529 TAAACCAATAAAAATACTGAAAATCCTTTATTTGGAACTAG i gorGor5.CYUI01000018v1 C 0 I 283 s nomLeu3.chr2 53924004 40 + 163208435 TAAGCCAATAAAAATACTGATAAT-CTTTATTTGGAACTAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391341 41 - 74971481 TAAACCAATAAAAATACTGACAATCCTTTATTTAGAACTAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21103981 41 - 78541002 TAAACCAATAAAAATACTGACAATCCTTTATTTAGAACTAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497655 41 + 26466322 TAAACCAATAAAAATACTGACAATCCTTTATTTAGAACTAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20824213 41 + 43916225 TAAACCAATAAAAATACTGACAATCCTTTATTTAGAACTAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255396 41 + 75399963 TAAACCAATAAAAATACTGACAATCCTTTATTTGGAACTAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6821993 41 - 7209941 TAAACCAATAAAAATACTGACAATCCTTTATTTAGAACTAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562941 41 + 3907144 TAAACCAATAAAAATACTGACAATCCTTTATTTGGAACTAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560356 41 - 44557958 TAAAGCATTAAAAACACTGATAATCATTTATTTGGAGCTAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374886 23 + 6628207 TAAACCAATAAAAACACTCATAA------------------ i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357807 41 - 5917169 TAAACCAATAAAAACACTGATAATCCTTTATTTGGAGCTAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9309989 41 - 10531588 TAAACCAATAAAAACAATGATAATCCTTTATGTGGAGCTAG i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 955901 41 + 1009443 TAATCCAATAAAAATACCCAAAGTCCTTTACTAGGAACTGG i dasNov3.JH569970 I 2 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e otoGar3.GL873566 13741244 0 + 13852661 C a score=141849.000000 s hg38.chr16_GL383557v1_alt 79743 15 + 89672 AACAGGTGTTTCTTA s panTro5.chr16 21511232 15 - 81586097 AACAGGTGTTTCTTA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572409 15 - 90481686 AACAGGTGTTTCTTA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805895 15 + 3010529 AACAGGTGTTTCTTA i gorGor5.CYUI01000018v1 I 283 C 0 s nomLeu3.chr2 53924044 15 + 163208435 AACAGGTGTTTCTTA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391382 15 - 74971481 AACAGGTGTTTCTTA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104022 15 - 78541002 AACAGGTGTTTCTTA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497696 15 + 26466322 AACAGGTGTTTCTTA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20824254 15 + 43916225 AACAGGTGTTTCTTA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255437 15 + 75399963 AACAGGTGTTTCTTA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822034 15 - 7209941 AACAGGTGTTTCTTA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562982 15 + 3907144 AACAGGTGTTTCTTA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560397 15 - 44557958 AACAGTTGTTTCATA i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3357848 15 - 5917169 AACAGCTGTTTCATA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9310030 15 - 10531588 AACAGTTGTTTCATC i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 955942 15 + 1009443 AGGAGGTATTTCTTA i dasNov3.JH569970 C 0 I 24149 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e saiBol1.JH378225 6374909 0 + 6628207 C e otoGar3.GL873566 13741244 0 + 13852661 C a score=678065.000000 s hg38.chr16_GL383557v1_alt 79758 78 + 89672 ATAACGTTTATTTCATTAAAAATATCCAAGAAACATCAgccaggcatggtggctcactcctataatcccagcactttg s panTro5.chr16 21511247 78 - 81586097 ATAACGTTTATTTCATTAAAAATATCCAAGAAACATCAgccaggcatggtggctcactcctataatcccagcactttg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572424 78 - 90481686 ATAACGTTTATTTCATTAAAAATATCCAAGAAACATCAgccaggcatggtggctcactcctataatcccagcactttg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805910 78 + 3010529 ATAACGTTTATTTCATTAAAAATATCCAAGAAACATCAgccagtcatggtggctcactcctataatcccagcactttg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53924059 78 + 163208435 ATAACGTTTATTTCATTAAAAACATCCAAGAAACATCAgccaggcgtggtggctcactcctataatcccagcactttg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391397 78 - 74971481 ATAATGTTTATTTCATTAAAAATATCCAAGAAACATCAgtcagacgtggtggctcactcttgtaatcccagcactttg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104037 78 - 78541002 ATAATGTTTATTTCATTAAAAATATCCAAGAAACATCAgtcagacgtggtggctcactcttgtaatcccagcactttg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14497711 78 + 26466322 ATAATGTTTATTTCATTAAAAATATCCAAGAAACATCAgtcagacgtggtggctcactcttgtaatcccagcactttg i macNem1.NW_012011355v1 C 0 I 8476 s cerAty1.NW_011999143v1 20824269 78 + 43916225 ATAATGTTTATTTCATTAAAAATATCCAAGAAACATCAgtcagacgtggtggctcactcttgtaatcccagcactttg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255452 78 + 75399963 ATAATGTTTATTTCATTCAAAATATCCAAGAAACATCAgtcaggcgtggtggctcactcttgtaatcccagcactttg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822049 78 - 7209941 ATAACGTTTATTTCATTAAAAATATCCAAGAAACATCAgtcagacgtggtggctcactcttgtaatcccagcactttg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 562997 78 + 3907144 ATAATGTTTATTTCATTAAAAATATGCAAGGAACATCAgtcaggcgtggtggctcactcttgtaatcccagcactttg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560412 67 - 44557958 ATAATGTTTATTTTATTA-------GTAAGAAAC----Accaggcacggtggctcacgcctgtaatcccagcactttg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374909 40 + 6628207 --------------------------------------gccgggcgcggtggctcaggcctgtaatcccagcactttg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357863 74 - 5917169 ATAATGTTTATTTTATTAAAAATATGTAAGAAAC----Accaggcacggtggctcacgcctgtaatgccagcactttg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9310045 74 - 10531588 ATAATGTTTATTTTATTAAAAATATGTAAGAAAC----Accaggcacggtggctcacgcctgtaatcccagcacttta i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13741244 43 + 13852661 ------------------------------AAGC----Accaggcatggtggctcacacctgtaatcccaggacttg- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I a score=674125.000000 s hg38.chr16_GL383557v1_alt 79836 85 + 89672 agaagctgagctgggtggatcacttgaggccaggagtttgagaccagcctggccaacatggtg-aaccccgtcgctactaaaaata s panTro5.chr16 21511325 85 - 81586097 ggaagctgagctgggtggatcacttgaggccaggagtttgagaccagcctggccaacatggtg-aaccccgtcgctactaaaaata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572502 85 - 90481686 ggaagctgagctgggtggatcacttgaggccaggagtttgagaccagcctggccaacatggtg-aaccctgtcgctactaaaaata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 805988 85 + 3010529 ggaagctgagctgggtggatcacttgaggccaggagtttgagaccagcctggccaacatggtg-aaccccgtcgctactaaaaata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53924137 85 + 163208435 ggaagctgagctgggtggatcacttgaggccaggagtttgagaccagcctggccaacacggtg-aaccccgtcgatactaaaaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391475 85 - 74971481 ggaagctgagttgggtggatcacttgaggccaggagtttgcgaccagcctggccaacacagtg-aaccctgtcgctactaaaaata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104115 85 - 78541002 ggaagctgagttgggtggatcacttgaggccaggagtttgcgaccagcctggccaacacagtg-aaccctgtcgctactaaaaata i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20824347 85 + 43916225 ggaagctgagttgggtggatcacttgaggccaggagtttgcgaccagcctggccaacacagtg-aaccctgtcgctactaaaaata i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255530 85 + 75399963 ggaagctgagttgggtggatcacttgaggccaggagtttgcgaccagcctggccaacacagtg-aaccctgtcactactaaaaata i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822127 85 - 7209941 ggaacctgagttgggtggatcacttgaggccacgagtttgcaaccagcctggccaacacagtg-aaccctgtcgctactaaaaata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 563075 85 + 3907144 ggaagctgagttgggtgcatcacttgaggccaggagtctgcgaccagcctggccaacacggtg-aaccctgtcactactaaaaata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560479 83 - 44557958 ggaggccaaggcaggtggatca--tgaagtcaggagatcgagacaaccttgtccaacacagtgaaacaccgtctctact-aaaata i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6374949 84 + 6628207 ggaggccgaggtgggtggatca--caagttcaagagatcgagaccatcctggtcaacatggtgaaaccccatctctactaaaaata i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3357937 84 - 5917169 gtaggccgaggcaggtggatca--tgaggtcaggagatcgagatcatcctggccaacacattgaaaccccgtctctactaaaaata i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9310119 84 - 10531588 gtaggctgaagcaggtggatca--tgaggtcaggagatcgagaccattttggccaacacagtgaaaccccgtctctactaaaaata i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13741287 82 + 13852661 ggaggccaaggtgggtggattgcttaagctcaggagttcaagacgaacttgagaaagagggag--atccagtctcta--aaaaata i otoGar3.GL873566 C 0 I 3834 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I a score=320962.000000 s hg38.chr16_GL383557v1_alt 79921 38 + 89672 -caaaaattagctgggcgtggtggcgcatgcctgtaatc s panTro5.chr16 21511410 38 - 81586097 -caaaaattagctgggcgtggtggcgcatgcctgtaatc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572587 38 - 90481686 -caaaaattagctgggcgtggtggcgcatgcctgtaatc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 806073 38 + 3010529 -caaaaattagctgggcgtggtggcgcatgcctgtaatc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53924222 38 + 163208435 -caaaaattagctgggtgtggtggcgcatgcctgtaatc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391560 38 - 74971481 -caaaaattagctgggagtggtggcgcatgcctgtaatc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104200 38 - 78541002 -caaaaataagctgggagtggtggcgcatgcctgtaatc i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20824432 38 + 43916225 -caaaaattagctgggagtggtggcgcatgcctgtaatc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255615 38 + 75399963 -caaaaattagctgggagtggtggcgcatgcctgtaatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822212 38 - 7209941 -caaaaattagctgggagtggtggcgcatgcttgtaatc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 563160 38 + 3907144 -caaaaattagcttggcgtggtggcgcatgcctgtaatc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560562 38 - 44557958 -aaaaaattagctgagcgtggtggtgtgtgcctgtaatc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6375033 39 + 6628207 caaaaaattagctgggcatggtggcatgtgcctgtaatc i saiBol1.JH378225 C 0 M 2061 s cebCap1.NW_016107433v1 3358021 39 - 5917169 caaaaaattagctgggcgtagtggtgtgttcctgtaatc i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9310203 39 - 10531588 caaaaaattagctgagcgtggtcgtgtgtgcctgtaatc i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=446535.000000 s hg38.chr16_GL383557v1_alt 79959 61 + 89672 ccaactatttggacggctgaggcacgagaatcacttgaacctgggaggcagaggttgcagt s panTro5.chr16 21511448 61 - 81586097 ccaactatttggacggctgaggcacgagaatcacttgaacctgggaggcagaggttgcagt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572625 61 - 90481686 ccaactatttggacggctgaggcacgagaatcacttgaacctgggaggcagaggttgcagt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 806111 61 + 3010529 ccaactatttggacggctgaggcacgagaatcacttgaacctgggaggcagaggttgcagt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53924260 61 + 163208435 ccaactatttggacggctgaggcagaagaatcacttgaacctgggaggcagaggttgcagt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391598 61 - 74971481 ccaactacttggacggctgaggcacaagaatcacttgaacccgggaggcagaggttgcagt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104238 61 - 78541002 ccaactacttggacggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagt i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20824470 61 + 43916225 ccaactacttggacagctgaggcacaagaatcacttgaacttgggaggcagaggttgcagt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255653 61 + 75399963 ccaactacttggacggctgaggcacgagaatcacttgaacctgggaggcagaggttgcagt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822250 61 - 7209941 ccaactacttggacggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 563198 61 + 3907144 ccaactacttggatggctgaggcacgagaatcacttgaacctgggaggcagaggttgcagt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21560600 61 - 44557958 ccagctactcaggaggccgaggcaggaaaattgcttgaaccagggagtccgaggttgcagt i calJac3.chr20 C 0 C 0 s cebCap1.NW_016107433v1 3358060 61 - 5917169 ccagctactcgggaggctgatgcaggagaattgcgtgaaccagggagtcagaggttgcagt i cebCap1.NW_016107433v1 C 0 I 13277 s aotNan1.NW_018500622v1 9310242 61 - 10531588 ccagttactcaagaggctgaggcaggagaattgcttgaaccagggagtcagaggttgcagt i aotNan1.NW_018500622v1 C 0 I 1985 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e saiBol1.JH378225 6375072 2061 + 6628207 M e otoGar3.GL873566 13741369 3834 + 13852661 I a score=282837.000000 s hg38.chr16_GL383557v1_alt 80020 62 + 89672 acgccaagatcgcaccactgcactccagcctgggcaacagggcgagactctggctt------a--aaaaa s panTro5.chr16 21511509 62 - 81586097 acgccaagatcgcaccactgcactccagcctgggcaacagagcgagactctggctt------a--aaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21572686 62 - 90481686 acgccaagatcgcaccactgcactccagcctgggcaacagagcgagactctggctt------a--aaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 806172 62 + 3010529 atgccaagatcgcaccactgcactccagcctaggcaacagagcgagactctggctt------a--aaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53924321 64 + 163208435 atgccaagatcgcaccactgcactccagcctgggcaacagagcgagactctggctt------aacaaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391659 60 - 74971481 atgccaagatcgcaccacagcactccagattgggcgacagagcaagactctggctc----------aaaa i rheMac8.chr20 C 0 I 19 s macFas5.chr20 21104299 62 - 78541002 atgccaagatcgcaccacagcactccagattgggcgacagagcaagactctggctc------a--aaaaa i macFas5.chr20 C 0 I 19 s cerAty1.NW_011999143v1 20824531 62 + 43916225 atgccaagatcgcaccacagcactccagattgggcgacagagcaagactctggctc------a--aaaaa i cerAty1.NW_011999143v1 C 0 I 19 s chlSab2.chr5 58255714 68 + 75399963 atgccaagatcgcaccacagcactccagactgggcgacagagcaagactctggctcaaaaaaa--aaaaa i chlSab2.chr5 C 0 I 19 s manLeu1.NW_012101698v1 6822311 62 - 7209941 atgccaagatcgcaccacagcactccagattgggcgacagagcaagactctggctc------a--aaaaa i manLeu1.NW_012101698v1 C 0 I 19 s colAng1.NW_012123265v1 563259 62 + 3907144 atgccaagatcgcaccacagcactccagactgggcaacagagcaagactctggctc------a--aaaaa i colAng1.NW_012123265v1 C 0 I 10844 s calJac3.chr20 21560661 40 - 44557958 gagccgggattacac----------------------caGAGATAGACTCTGTCTC------C--AAAAA i calJac3.chr20 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e saiBol1.JH378225 6375072 2061 + 6628207 M e otoGar3.GL873566 13741369 3834 + 13852661 I a score=124552.000000 s hg38.chr16_GL383557v1_alt 80082 32 + 89672 agaaaaaaaaaTGCAAGAAACACCAATAAAAA s panTro5.chr16 21511571 32 - 81586097 agaaaaaaaaaTGCAAGAAACACCAATAAAAA i panTro5.chr16 C 0 I 2 s panPan2.chr16 21572748 31 - 90481686 ag-aaaaaaaaTGCAAGAAACACCAATAAAAA i panPan2.chr16 C 0 I 3239 s gorGor5.CYUI01000018v1 806234 32 + 3010529 agaaaaaaaaaTGCAAGAAACACCAATAAAAA i gorGor5.CYUI01000018v1 C 0 I 2 s nomLeu3.chr2 53924385 32 + 163208435 agataaaaaaaTGCAAGAAACACCAATAAAAA i nomLeu3.chr2 C 0 I 3 s rheMac8.chr20 21391738 32 - 74971481 aaacaaaaaaaTACAAGAAACACCAATAAGAA i rheMac8.chr20 I 19 C 0 s macFas5.chr20 21104380 32 - 78541002 aaaaaaaAAAATACAAGAAACACCAATAAGAA i macFas5.chr20 I 19 C 0 s cerAty1.NW_011999143v1 20824612 32 + 43916225 aaacaaaAAAATACAAGAAACACCAATAAGAA i cerAty1.NW_011999143v1 I 19 C 0 s chlSab2.chr5 58255801 32 + 75399963 AAACAAAAAAATACAAGAAACACCAATAAGAA i chlSab2.chr5 I 19 C 0 s manLeu1.NW_012101698v1 6822392 32 - 7209941 aaacaaaAAAATACAAGAAACACCAATAAGAA i manLeu1.NW_012101698v1 I 19 C 0 s calJac3.chr20 21560701 31 - 44557958 -AAAAAGATAAGAAAAGAAAAAATAACAAGAA i calJac3.chr20 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e saiBol1.JH378225 6375072 2061 + 6628207 M e otoGar3.GL873566 13741369 3834 + 13852661 I a score=440720.000000 s hg38.chr16_GL383557v1_alt 80114 125 + 89672 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctgtagtcccagctactcagg--agactgggtaggaggatcacttgagcccagaagttggagaccagtct-gcacaacatagtgagacc s panTro5.chr16 21511605 125 - 81586097 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctgtagtcccagctactcagg--agactgggtaggaggatcacttgagcccagaagttggagaccagtct-acacaacatagtgaaacc i panTro5.chr16 I 2 C 0 s gorGor5.CYUI01000018v1 806268 125 + 3010529 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctgtggtcccagctactcagg--agactgggtaggaggatcacttgagcccagaagttggagaccagtct-gcacaacatagtgagacc i gorGor5.CYUI01000018v1 I 2 C 0 s nomLeu3.chr2 53924420 125 + 163208435 AGTTTCTTAAATAAACGAGGTgggcagagcagcacaaacctgtagtcccagctactccgg--agactgggcaggaggatcacttgagcccagaagttggagaccagtct-gcacaacatagtgagacc i nomLeu3.chr2 I 3 C 0 s rheMac8.chr20 21391770 126 - 74971481 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctatagtcccagctactcagg--agactgggcaggaggatcacttgagcccagaagctggagaccagtctggcacaacacagtgagatc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104412 125 - 78541002 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctatagtcccagctactcagg--agactgggcaggaggatcacttgagcccagaagttggagaccagtct-gcacaacacagtgagatc i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20824644 125 + 43916225 AGTTTCTTAAATAAACAAGGTGGGCAGAACAGCACAAAcctatagtcccagctactcagg--agactgggcaggaggatcacttgagcccagaagttggagaccagtct-gcacaacacagtgagatc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58255833 125 + 75399963 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctatagtcccagctactcggg--agactgggcaggaggatcacttgagcccataagttggagaccagtct-gcacaacacagtgagatc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822424 125 - 7209941 AGTTTCTTAAATAAACAAGGTgggcagagcagcacaaacctatagtcccagctactcagg--agactgggcaggaggatcacttgagcccagaagttggagaccagtct-gcacaacacagtgagatc i manLeu1.NW_012101698v1 C 0 C 0 s calJac3.chr20 21560732 114 - 44557958 --------ACATCAgccaggcgtgctg----gcttattcctgtaatcccag-tactatagaaagacgaggtgggtggatcacttgagtccaggagtttgagaccagcct-ggccaacatggtgaagcc i calJac3.chr20 C 0 I 3489 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e saiBol1.JH378225 6375072 2061 + 6628207 M e otoGar3.GL873566 13741369 3834 + 13852661 I a score=2403630.000000 s hg38.chr16_GL383557v1_alt 80239 815 + 89672 tca---tct---ttttttgtttgtttgtttgtattt-tttgagacggagtttcgctctgtcacccaggctggagggcagtg-gcatgatctcggctcactgcaacctctgccgtcccgggttcaagagattctcccacctcaggctcccaagtagctgggattacaggcacacaccaccacacccggctaatttttgtttttgttt---tttttgagacagagtttcactcttgtcgcccaggctggagtgcaatggcgcgatctcagctcaccacaacccctgcctccttggttcaagccattcttctgcctcagcctcctgagtagctgggattacaggcgtgcgccaccatgcctggttaatttttgtattattagtagagatggggtttcaccatgttgtccaggctggtctcaaactcctgacct-aggggatataccctcctcggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccaggcttgt-a----tttatttttcagtatagacagggttttaccacgtttgccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtctcatctttaaaaagaatgaaagaaATaaacaag--aaaaaacaaaacaaaacaaaaaaacacaactcacaac----acaaaaaacccaaacaaGAGTAGTAATGTggctagatgtgatggctcacatctgtaatcccgcactttggaaggcaggagaatcacttcaacccaggaatttgagaccaacctgggcaacatagtgagactgcatctctacaaaaaatgttaaaaactt s panTro5.chr16 21511730 815 - 81586097 tca---tct---ttttttgtttgtttgtttgtattt-tttgagacggagtctcgctctgtcacccaggctggagtgcagtg-gcatgatctcggctcactgcaacctctgccgtcccgggttcaagagattctcccacctcaggctcccaagtagctgggattacaggcacacaccaccacacccggctaatttttgtttttgttt---tttttgagacagagtttcactcttgtcgcccaggctggagtgcaatggcacgatctcagctcaccacaacccctgcctccttggttcaagccattcttctgcctcagcctcctgagtagctgggattacaggcgtgcgccaccatgcctggttaatttttgtattattagtagagatggggtttcaccatgttgtccaggctggtctcaaactcctgacct-aggggatccaccctccttggcctcccaaagtgctgggattacagatgtgagtcaccgtgcccgggcttgt-a----tttatttttcagtagagacagggttttaccacgtttgccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcagcctcccaaagtCTCATCTTTAAAAAGAATGAAAGAAATaaacaag--aaaaaacaaaacaaaacaaaaaaaaacaactcacaac----acaaaaaacccaaacaaGAGTAGTAATGTggctagatgtgatggctcacatctgtaatcccgcactttggaaggcaggagaatcacttcaacccaggaatttgagaccaacctgggcaacatagtgagactgcatctctacaaaaaatgttaaaaactt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 806393 808 + 3010529 tca---tct---ttt----tttgtttgtttgcattt-ttagagacggagtctcgctctgtcacccaggctggagtgcagtg-gcacgatctcggctcactgcaacctctgccgtcccaggttcaagagattctcccacctcaggctcccaagtagctgggattacaggcacacaccagcacacccggctaatttttgtttttgttt---tttttgagacagagtttcactcttgtcgcccaggctggagtgcaatggc-caatctcagctcaccacaa-ccctgcctccttggttcaagccattcttctgcctcagcctcctgagtagctgggattacaggcgtgcgccaccatgcctggttaatttttgtattattagtagagatggggtttcaccatgttgtccaggccggtctcaaactcctgacct-aggggatccactctccgcggcctcccaaagtgctgggattacaggcgtgagtcaccgcgcccgggcttgt-a----tttatttttcagtagagacagggttttaccacgtttgccaggctggtctcaaattcctgacctcaggtgatccgcccgcctcagcctcccaaagtctcatctttaaaaagaatgaaagaaATAAACAAG--AAAAAACCAAACAAAACAAAAAAACACAACTCACAAC----ACAAAAAACCCAAACAAGAGTAGTAATGTggctagatgtgatggctcacatctgtaatcccgcactttggaaggcaggagaatcacttcaacccaggaatttgagaccaacctgggcaacatagt-agactgcatctctacaaaaaacgttaaaaactt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53924545 821 + 163208435 tca---tctttattttttatttttttgtttttattt-tttgagacggagtctggctctatcacccaggctggagtgcagtg-gcatgatctcggctcactgcaacctctgccttcgtgggttcaagagattctcccacctcagcctcccaagtagctgggattacaggcacacaccaccacacttggctaatttttgtttttgtttttgtttttgagacagagtttcactcttgtcgcccaggctagagtgcaatggcgcaatctcagttcaccgcaacccctgcctccttggttcaagccattttcctgtatcagccttctgagtagctgggattacaggtgtgtgccaccatgcttggttaatttttgtattattagtagagacgggatttcaccacgttgtccaggcgggtctcaaactcctgacctcaggtgatccaccctccttggcctcccaaagtgctgggattacaggtgtgagtcaccgtgcccaggcttgt-a----tttatttttcagtagagacagggttttaccatgtttgccaggctgatctcaaactcctgacctcaggtgatccacccaccccagcctcccgaagtCTCATCTTTAAAAAGAATGGaagaaataa-------gaaaatcaaaacaaaacaaaaaaacacaactcacaacacaaacaaaaaacCCAAGCAAGAGTAGTAATGTggctggacgtgatggctcacatctgtaatcccgcactttggaaggcaggagaatcacttcagcccaggaatttgagaccatcctgggcaacatagtgagactgcatctctacaaaaaatgttaaaaactt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21391896 828 - 74971481 tcAATTTCTTTAttttttatttttttttttttatttctttgagacagagtct-cctctgccacccaggctggaatgcactgcgcatgatccggcctcactgcaacctctgccttcccaggttcaagagattctcccacctcggcttcccaagtagctgggattacaggcacacaccaccacatctggttaatttttgtttttgttt---tttttgagacggagtttcactcttgtcgcccagggtggagtgcaatggcacaatctcagctcactgcaacccctgcctccttggttcaagccattctcctgcctcagccttccaagtagctgggattataggcatgtgccaccatgcctggttaatttttg---tattagtagagacgaagcttcaccatatcatccaggctggtctcaaattcctgacctcaggtgatgcaccctccttggcctcccaaagtgctgggattacaggtgtgagtcgctgcgcacgggcttgc-a-ttttttttttttcagtagagacatggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgattcgcccacctcagcctcccaaagtCTCATTTTTAAaaagaatgaaagaaataaacaag-aaaaaaacaaaacaaaacaaaaaaacataactcacaacacaaacaaaaaacccaaacaaGAGTAGTAATGTggctggacatgatggctcacatctataatcccgcactttcgaaggcaagagaatcacttcagcccaggaatttgagaccaatctgggcaacacagtgagactgcatctctacaaaaaacgttaaaaactt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21104537 816 - 78541002 tca---tctttattttttatttttattt---------cttgagacagagtctccctctgtcacccaggctggaatgcactg-gcatgatcccggctcactgcaacctctgccttctcaggttcaagagattctcccacctcggcttcccaagtagctgggattacaggcacacaccaccacatctggttaatttttgtttttgttt---tttttgagacggagtttcactcttgtcgcccaggctggagtgcaatggcacaatctcagctcactgcaacccctgcctccttggttcaagccattctcctgcctcagccttccaagtagctgggattataggcatgtgccaccatgcctggttaatttttg---tattagtagagacgaagcttcaccatatcatccaggctggtctcaaattcctgacctcaggtgatgcaccctccttggcctcccaaagtgctgggattacaggtgtgagtcgctgcgcacgggcttgc-a-ttttttttttttcagtagagacagggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgattcgcccacctcagcctcccaaagtCTCATTTTTAAaaagaatgaaagaaataaacaag-aaaaaaacaaaacaaaacaaaaaaacataactcacaacacaaacaaaaaacccaaacaaGAGTAGTAATGTggctggacatgatggctcacatctataatcccgcactttcaaaggcaagagaatcacttcagcccaggaatttgagaccaatctgggcaacacagtgacactgcatctctacaaaaaacgttaaaaactt i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20824769 825 + 43916225 tca---tctttattttatatttttttatttttattt-cttgagacagagtcttcctctgtcacccaggctggaatgcactg-gcatgatcccggctcactgcaacctctgccttcccaggttcaagagattctcccacctcggcttcccaagtagctaggattacaggcacacaccaccacatctggttaatttttgtttttgttt---tttttgagacggagtttcactcttgtcgcccaggctggagtgcaatggcacaatctcagctcactgcaacccctgcctccttggttcaagccattctcctgcctcagccttccaagtagctgggattataggcatgtgccaccatgcctggttaatttttg---tattagtagagacgaagcttcaccatatcatccaggctggtctcaaattcctgacctcaggtgctccaccctcctcggcctcccaaagtgctgggattacaggtgtgagtcgctgcgcacgggcttgctt-ttttttttttttcagtagagacagggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgattcgcccacctcagcctcccaaagtCTCATTTTTAAaaagaatgaaagaaataaacaag-aaaaaaacaaaacaaaacaaaaaaacataactcacaacacaaacaaaaaacccaaacaaGAGTAGTAATGTggctggacatgatggctcacatctataatcccgcactttcgaaggcaggagaatcacttcagcccaggaatttgagaccaatctgggcaacacagtgagactgcatctctacaaaaaacgttaaaaactt i cerAty1.NW_011999143v1 C 0 I 2615 s chlSab2.chr5 58255958 825 + 75399963 tca---tctttattttttatttttttatttttattt-cttgagacggagtctccctctgtcacccaggctggaatgcactg-gcatgatcccggctcactgcaacctctgccttcccaggttcaagagattctcccacctcggcttcccaagtagctgggattacaggcacacaccaccacacctggttaatttttgtttttgttt---tttttgagacggagtttcactcttgtcgcccaggctggagtgcaatggcacaatctcagctcactgcaacccctgcctccttggttcaagccattctcctgcctcagccttccaagtagttgggattataggcatgtgccaccatgcctggttaatttttg---tattagtagagacgaagcttcaccatatcatccaggctggtctcaaactcctgacctcaggtgatccaccctccttggcctcccaaagtgctggcattacaggtgtgagtcgccgcacacgggcttgc-atttttttttttttcagtagagacagggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgattcgcccacctcagcctcccaaagtCTCATTTTTAAAAAGAACGAAAGAAATAAACAAG-AAAAATACAAAACAAAACAAAAAAACACAACTTAAAACACAAACAAAAAACCCAAACAAGAGTAATAATGTggctggacatgatggctcacatctataatcccgcactttcgaaggcaggagaatcacttcagcccaggaatttgagaccaacctgggcaacacagtgagactgcatctctacaaaaaacgttaaaaactt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6822549 817 - 7209941 tca---tcttta--------ttttttatttttattt-cttgagacagagtctccctctgtcacccaggctggaatgcactg-gcatgatcccggctcactgcaacctctgccttcccaggttcaagagattctcccacctcggcttcctaagtagctgggattacaggcacacacaatcacatctggttaatttttgtttttgttt---tttttgagacggagtttcactcttgtcgcccaggctggagtgcaatggcacaatctcagctcactgcaacccctgcctccttggttcaagccattctcctgcctcagccttccaagtagctgggattataggcatgtgccaccatgcctggttaatttttg---tattagtagagacgaagcttcaccatattatccaggctggtctcaaattcctgacctcaggtgatccaccctccttggcctcccaaagtgctgggattacaggtgtgagtcgctgctcacgggcttgc-a-tttttttttttccagtagagactgggtttcgccatgttggccaggctggtctcaaactcctgacctcaggtgattcgcccacctcagcctcccaaagtctcatttttaaaaagaatgaaagaaATAAACaagaaaaaaaacaaaacaaaacaaaaaaacataactcacaacacaaacaaaaaacccaaacaaGAGTAGTAATGTggctggacatgatggctcacatctataatcccgcactttcgaaggcaggagaatcacttcagcccaggaatttgagaccaatctgggcaacacagtgagactgcatctctacaaaaaacgttaaaaactt i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e saiBol1.JH378225 6375072 2061 + 6628207 M e calJac3.chr20 21560846 3489 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=574402.000000 s hg38.chr16_GL383557v1_alt 81054 238 + 89672 agcctggtggtgcatgcctgtagtcccagccacttgggaggctgaggt---aggattgctcgagcctgggaggcagaggctgcagtgagccaggattacaccactgcactccacctgggtgacagagcaagaccgtgtctc-------aaaaaaaaaaaaaaaaaGTAATGAagatatacatccaaaaga--------attgaaggcaggaactcaaacagctatactaatacaGATTGAAGATTCCTAATCCAGg s panTro5.chr16 21512545 248 - 81586097 agcctggtggtgcatgcctgtagtcccagccacttgggaggctgaggtaggaggattgctcgagcctgggaggcagaggctgcagtgagccaggattacaccactgcactccacctgggtgacagagcaagaccgtgtctcaaaaaaaaaaaaaaaaaaaaaaaaGTAATGAAGATATACATCCAAAAAA--------ACTGAAGGCAGGAACTCAAACAGCTATACTAATACAGATTGAAGATTCCTAATCCAGg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807201 243 + 3010529 agcctggtggtgcatgcctgtagtcccagccacttgggaggctgaggtaggaggattgcttgagcctgggaggcagaggctgcagtgagccaggattacaccactgcactccacctgggtgacagagcaagaccgtgtctc-----aaaaaaaaaaaaaaaaaaaGTAATGAagatatacatccaaaaga--------attgaaggcaggaactcaaacagctatactaatacaGATTGAAGATTCCTAATCCAGg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925366 254 + 163208435 agcctgctggtgcatgcctgtagtcccagccacttgggaggctgaggtaggaggattgcttgagcctgggaggcagaggctgcagtgagccaggattacaccactgcactccacctgggtgacacagcaagactctgtctc--aaaaaaaaaaaaaaaaaaaaaaGTAATGAAGATATACATCCAAAAGAATTGAAGGATTGAAGGCAGGAACTCAAACAGCTATACTAACACAGATTGAAGATTCCTAATCCAGg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21392724 243 - 74971481 agcctggtggtgcatgcctgtagtcccagccactcgggaggctgaggtaggaggattgcttgagcctaggaggcggaggctgcagtgagctaggattataccactgcactccacctaggtgacagagcaagaccttgcctc-----aaaaaaacaaaaaaaaaaaGTAACAAAGATACACATCCAAAAGA--------CCTGAAGGCAGGAACTCAAACAGCTTTGCAAATACAGACTGAAGATTCCTAATCCAGg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21105353 243 - 78541002 agcctggtggtgcatgcctgtagtcccagccacttgggaggctgaggcaggaggactgcttgagcctaggaggcggaggctgcagtgagctaggattataccattgcactccacctaggtgacagagcaagaccttgcctc-----aaaaaaaaaaaaaaaaaaaGTAACGAAGATACACATCCAAAAGA--------CCTGAAGGCAGGAACTCAAACAGCTTTGCAAATACAGACTGAAGATTCCTAATCCAGG i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58256783 246 + 75399963 agcctggtggtgcatgcctatagtcccagccacttgggaggctgaggtaggaggattgcttgagcctgggaggcagaggctgcagtgagctaggattataccactgcactccacctaggtgacagagcaagagcttgcctc--aaaaaaaaaaaaaaaaaaaaaaGTAACGAAGATACACATCCAAAAGA--------ACTGAAGGCAGGAACTCAAACAGCTTTGCAAATACAGACTGAAGATTCCTAATCCAGg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6823366 241 - 7209941 agcctggtggtgcatgcctgtagtcccagccacttgggaggccgaggtaggaggattgcttgagcctgggaggcagaggctgcagtgagctaggattataccactgcactccacctaggtgacagagcaagaccttgcctc-------aaaaaaaaaaaaaaaaaGTAACGAAGATACACATCCAAAAGA--------ACTGAAGGCAGGAACTCAAACAGCTTTGCAAATACAGACTGAAGATTCCTAATCCAGg i manLeu1.NW_012101698v1 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6375072 2061 + 6628207 M e calJac3.chr20 21560846 3489 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=13772.000000 s hg38.chr16_GL383557v1_alt 81292 5 + 89672 gccag s panTro5.chr16 21512793 5 - 81586097 gccag i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807444 5 + 3010529 gccag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925620 5 + 163208435 gccgg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21392967 5 - 74971481 gctgg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21105596 5 - 78541002 GCCGG i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58257029 5 + 75399963 gccgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6823607 5 - 7209941 gccgg i manLeu1.NW_012101698v1 C 0 C 0 s saiBol1.JH378225 6377158 5 + 6628207 gctgg i saiBol1.JH378225 M 2061 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e calJac3.chr20 21560846 3489 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=468960.000000 s hg38.chr16_GL383557v1_alt 81297 193 + 89672 gcgtggtggctcaggcctgtaatcacagcaccttgggaggctgaggcgggcggatcacttgaggtc-ggggttagaga-------------------------------ccagcctggccaac-atgataaaaccccgtctctattaaa-------------------------------------------------------aatacaa----------------aaatta-------ggccgggcgcagtggctcacatctgtaattccaacactttgggaagccgaggcgggcggatcac s panTro5.chr16 21512798 193 - 81586097 gcgtggtggctcaggcctgtaatcacagcaccttgggaggctgaggcgagcggatcacttgaggtc-ggggttagaga-------------------------------ccagcctggccaac-atgataaaaccccgtctctattaaa-------------------------------------------------------aatacaa----------------aaatta-------ggccgggtgcagtggctcacatctgtaattccagcactttgggaagccgaggcgggcggatcac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807449 193 + 3010529 gcgtggtggctcaggcctgtaatcacagcaccttgggaggctgaggcgggcggatcacttgaggtc-ggggttagaga-------------------------------cgagcctggccaac-atgataaaaccccgtctctattaaa-------------------------------------------------------aatacaa----------------aaatta-------ggctgggcacagtggctcacatctgtaattccagcactttgggaggccgaggcgggcggatcac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925625 194 + 163208435 gcgtggtggctcaggcctgtaatcacagcaccttgggaggctgaggcgggcggatcacttgaggtcaggggttagaga-------------------------------ccagcctggccaac-atgataaaaccccatctctattaaa-------------------------------------------------------aatacaa----------------aaatta-------ggctgggcgcagtggctcacacctgtaattccagcactttgggaggccgaggtgggcagatcac i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21392972 180 - 74971481 gcgtggtggctca-------------cgcaccttgggaggctga-gaaggtggatcacttgaggtcaggggttagaga-------------------------------ccagcctggccaac-atgacgaaacaccgtctctactaaa-------------------------------------------------------aatacaa----------------aaatta-------ggccgggcacggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcagatcac i rheMac8.chr20 C 0 I 2156 s macFas5.chr20 21105601 166 - 78541002 ---------------------------gcaccttgggaggctga-gaaggtggatcacttgaggtcaggggttagaga-------------------------------ccagcctggccaac-atgacgaaacacagtctctactaaa-------------------------------------------------------aatacaa----------------aaatta-------ggccaggcacggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcagatcac i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58257034 181 + 75399963 gcgtggtggctca-------------tgcaccttgggaggctgaggagggtggatcacttgaggtcaggggttagaga-------------------------------ccagcctgaccaac-atgacgaaacaccgtcactactaaa-------------------------------------------------------aatacaa----------------aaatta-------cgccgggcacggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcac i chlSab2.chr5 C 0 I 1 s manLeu1.NW_012101698v1 6823612 180 - 7209941 gcatggtggctca-------------cgcaccttgggaggctga-gaaggtggatcacttgaggtcaggggttagaga-------------------------------ccagcctggccaac-atgaagaaacaccgtctctactaaa-------------------------------------------------------aatacaa----------------aaatta-------ggccgggcacggtggctcatgcctgtaatcccagcactttggaaggccgaggcgggcagatcac i manLeu1.NW_012101698v1 C 0 I 1857 s calJac3.chr20 21564335 287 - 44557958 gcctggtggtacacgtctgtagtcccagccacttgggaggctaaggtaggaggaccgcttcagcctgggaggcagaggctacagtgagccatgattacaccattgcactcca-cctcggtaac-agagcaaaatcctgtctttaaaaaaaaaaaaGAGTAGTAATGAAGATATACATCCAAAAGAAGTAAAGACAGGAACTCA-AACATATATAAAATAC-------AGGCTG-------ggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggtggatcac i calJac3.chr20 I 3489 C 0 s saiBol1.JH378225 6377163 289 + 6628207 gcatggtggcacgtgcctataatcccagctactcaggaggctgaggcaggagaattgcctgaactcaggaggcggaggttgcggtgagccgagatcacactattgcactccagcctgggtaacaagagtgaaaccccgtctcaaaaaaaacaaaaaaacaaaagagaaaGCAAAC---------AAACAAAAACACAAGCCCACAACACAAACAAAAAACCCAAACAAGAGTAGTAATGTgactggacgtgatggctcacatctgtaattcctgcactctgg------aagagaggagaatcac i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=157145.000000 s hg38.chr16_GL383557v1_alt 81490 128 + 89672 ttgaagtcaggggttagacaccagcctggccaacataatgaaaccccgtctctatt-----aaaaat-acaaaaattaggctgggcacggtggctcacgcctgtaattccagcactttgggaggccgaggcggg s panTro5.chr16 21512991 128 - 81586097 ttgaggtcaggggttagacaccagcctggccaacataatgaaaccccgtctctatt-----aaaaat-acaaaaattaggctgggcacggtggctcacgcctgtaattccagcactttgggaagcccaggcggg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807642 128 + 3010529 ttgaggtcaggggttagacaccagcctggccaacataatgaaaccccgtctctatt-----aaaaat-acaaaaattaggctgggcacggtagctcacgcctgtaattccagcactttgggaggccgaggcggg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925819 128 + 163208435 ttgaggtcaggggttagagaccagcctggccaacatgatgaaaccctgtctctatt-----aaaaat-acaaaaattaggctgcacgcagtggctcacacctgtaattccagcactttgggaggccgaggcggg i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21105767 131 - 78541002 --gaggtcaggagatcaggaccatcctgattaacacggtgaaacaccgtctctactgaaaaaaaaat-acaaataattagccgggcgcggtgacgggcgcctgtagtcccggctactagggaggctgaggcagg i macFas5.chr20 C 0 C 0 s calJac3.chr20 21564622 127 - 44557958 g--aggtcaagagatcgagaccatcctggtcaacatggtgaaaccccgtctctact-----aaaaattacaaaaaattagctgggcatggtggtgcgtgcctgtaatcccagctactcaggaggctgaggcaag i calJac3.chr20 C 0 I 59 s saiBol1.JH378225 6377452 124 + 6628207 ttcagcccaggaatttgagaccaatctggacaacatagtgagaccccatctctaca-----aaaaatgttaaaaacttagcc-----tggtggtacacgcctgtagtcccagccacttgggaggctaaggtagg i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58257215 1 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=4604.000000 s hg38.chr16_GL383557v1_alt 81618 8 + 89672 cagatcac s panTro5.chr16 21513119 8 - 81586097 cagatcac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807770 8 + 3010529 cagatcac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925947 8 + 163208435 cagatcac i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21105898 8 - 78541002 agaatggt i macFas5.chr20 C 0 C 0 s saiBol1.JH378225 6377576 8 + 6628207 aggactac i saiBol1.JH378225 C 0 I 54 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58257215 1 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e calJac3.chr20 21564749 59 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=-4053.000000 s hg38.chr16_GL383557v1_alt 81626 1 + 89672 a---------------------- s panTro5.chr16 21513127 1 - 81586097 a---------------------- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807778 1 + 3010529 a---------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925955 1 + 163208435 g---------------------- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21105906 23 - 78541002 gtgaacccgggaggcagagcttg i macFas5.chr20 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58257215 1 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6377584 54 + 6628207 I e calJac3.chr20 21564749 59 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=10404.000000 s hg38.chr16_GL383557v1_alt 81627 17 + 89672 aggtca--ggagatcaaga--------- s panTro5.chr16 21513128 17 - 81586097 aggtca--gaagatcaaga--------- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807779 17 + 3010529 agatca--ggagatcaaga--------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925956 17 + 163208435 aggtca--ggagatcgaga--------- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21105929 28 - 78541002 cagacagcggagattgcgccactgcatt i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58257216 17 + 75399963 aggtca--ggagatcagga--------- i chlSab2.chr5 I 1 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6377584 54 + 6628207 I e calJac3.chr20 21564749 59 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=5981.000000 s hg38.chr16_GL383557v1_alt 81644 4 + 89672 ccat s panTro5.chr16 21513145 4 - 81586097 ccat i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807796 4 + 3010529 ccat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925973 4 + 163208435 ccat i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21105957 4 - 78541002 ccag i macFas5.chr20 C 0 C 0 s chlSab2.chr5 58257233 4 + 75399963 ccat i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21564808 4 - 44557958 ccag i calJac3.chr20 I 59 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6377584 54 + 6628207 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=106749.000000 s hg38.chr16_GL383557v1_alt 81648 91 + 89672 cctggctaac-acggtgaaaacccatctctactg-aaaaaa---------------------aaaatac----------------------aaaaaatta------------------------gccgggtgtggtggcgggcgcctgtagtcccagcta s panTro5.chr16 21513149 92 - 81586097 cctggctaac-acggtgaaaacccatctctactgaaaaaaa---------------------aaaatac----------------------aaaaaatta------------------------gccgggtgtggtggcgggcgcctgtagtcccagcta i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807800 91 + 3010529 cctggctaac-acggtgaaaacccatctctactg-aaaaaa---------------------aaaatac----------------------aaaaaatta------------------------gccaggtgtggtggcgggcgcctgtagtcccagcta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53925977 91 + 163208435 cctggctaac-acggtgaaaacctgtctctactg-aaaaaa---------------------aaaatac----------------------aaaaaatta------------------------gccgggtgtggtggcggctgcctgtagtcccagcta i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21105961 89 - 78541002 cctgggcaat-agagcaagactctgtctcaaaaa--aaaca---------------------aaaaaac----------------------aaaaattag------------------------ac-aggcgtggtggcatgagcctgtagtcccagcta i macFas5.chr20 C 0 I 2022 s chlSab2.chr5 58257237 90 + 75399963 cctgattaac-acggtgaaacaccgtctctactg--aaaaa---------------------aaaatac----------------------aaaaaaaaa------------------------gctgggcacggtggtgggtgcctgtagtcccagcta i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21564812 116 - 44557958 cctgggtaacaagagcgaaactccgtctcaaaaa-aaaaaa---------------------aaaaaaa----------------------aaaaaaaTACAGGCTGAAGATTCCTAATCCAAAgccagccgtggtggctcacaattgtaatcccagcac i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6377638 158 + 6628207 cctgggtaac-agagcaaaatcctatttaaaaaa-aaaaaaTAGTAATGACGATATACATCGAAAAGAACTAAAGACAGGAACTCAAACATATACAAATACAGGCTGAAGATTTCTAATCCAAggccagtcgtggtggctcacatttgtaatcccagcac i saiBol1.JH378225 I 54 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=40094.000000 s hg38.chr16_GL383557v1_alt 81739 24 + 89672 cttgggaagctgaggcaggagaat s panTro5.chr16 21513241 24 - 81586097 cttgggaagctgaggcaggagaat i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807891 24 + 3010529 cttgggaagctgaggcaggagaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926068 24 + 163208435 cttgggaggctgaggcaggagatt i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58257327 24 + 75399963 ctcggaaggctgaggcaggagaat i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21564928 24 - 44557958 cttgggaagctgaggcaggcggat i calJac3.chr20 C 0 I 62 s saiBol1.JH378225 6377796 24 + 6628207 tttgggaagctgaggcaggtggat i saiBol1.JH378225 C 0 I 23 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=43388.000000 s hg38.chr16_GL383557v1_alt 81763 56 + 89672 ggggcgtgaaccagggaggcggagcttgcagtgagcggagatcacgccactgcact s panTro5.chr16 21513265 54 - 81586097 --ggcgtgaaccagggaggcggagcttgcagtgagcggagatcacgccactgcact i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807915 54 + 3010529 --ggcgtgaaccagggaggcggagcttgcactgagcggagatcacgccactgcact i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926092 54 + 163208435 --ggcgtgaaccagggaggcggagcttgcagtgaacagagattgtgccactgcact i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58257351 54 + 75399963 --ggtgtgaacccgggaggcagagcttgcagacagcggagattgcaccactgcatt i chlSab2.chr5 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6377820 23 + 6628207 I e calJac3.chr20 21564952 62 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=37222.000000 s hg38.chr16_GL383557v1_alt 81819 65 + 89672 ccagcctagg-cgacagagcaagattccgtctcgaaaaac-aaaacaaacaaacaaaacaacaaaac s panTro5.chr16 21513319 62 - 81586097 ccagcctagg-cgacagagcaagattccgtctcaaaaaac-aaaacaaacaaacaa---aacaaaac i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 807969 66 + 3010529 ccagcctagg-cgacagaacgagactctgtctcaaaaaacaaaaaaaaacaaacaaaacaacaaaac i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926146 63 + 163208435 ccagcctggg-cgacagagcaagactccgtctcaaaaaaaaaaaaaaaacacacac---acaaaaac i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58257405 57 + 75399963 ccagcctggg-caacagagcaagactctgtctcaaaaaaaccaaaaaaac---------aaaaaaac i chlSab2.chr5 C 0 C 0 s saiBol1.JH378225 6377843 39 + 6628207 ctagccttggccaacatggtgaaactctgtctctactaa---------------------------- i saiBol1.JH378225 I 23 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9310303 1985 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e calJac3.chr20 21564952 62 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=1911.000000 s hg38.chr16_GL383557v1_alt 81884 1 + 89672 a s panTro5.chr16 21513381 1 - 81586097 a i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 808035 1 + 3010529 a i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926209 1 + 163208435 a i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58257462 1 + 75399963 a i chlSab2.chr5 C 0 C 0 s saiBol1.JH378225 6377882 1 + 6628207 a i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9312288 1 - 10531588 a i aotNan1.NW_018500622v1 I 1985 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e calJac3.chr20 21564952 62 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=1134203.000000 s hg38.chr16_GL383557v1_alt 81885 588 + 89672 aaaattagacaggcgtggtggcatgagcctgtagtcccagct-----aAAAAG------AAAAAAAAAGGATT----CCTAAtccaaaatccgaaactttttgagtgctaacatgacaccacaagtagaaaacttcacatctgacctcatctgctggatcacagtc-aaaactgtgtttcatgcacaaaatgaataaaatattgtacaaaactaccgtcaggctatgtgtatcagggacgtatgaaacataaatgcatttcttgtataggctggggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaaaatccaaaatctgaaacacttctggttccaagcacaaccagatcagagacactcaacctgTACTTGTACCTCAATGTTCAGAGTAGCATTATTAttttttgtttgtttgtttgtttggagacagagtcttgctc-tgtcacccaggctggagtgcagcggggtgatctcagatcactgcaacctccgcctccctggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgcataccgccacgcccagctaatttttt s panTro5.chr16 21513382 592 - 81586097 aaaattagacaggcgtggtggcatgagcctgtagtcccagctaaaaaaaaaaa------aaaaaaaaaGGATT----CCTAAtccaaaatccgaaactttttgagtgctaacatgacaccacaagtagaaaacttcacatctgacctcatctgctggatcacagtc-aaaactgtgtttcatgcacaaaatgaataaaatattgtacaaaattactgtcaggctatgtgtatcagggacgtatgaaacataaatgcatttcttgtataggctggggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatccaaaaaaaaatccaaaatctgaaacacttctggttccaagcacaaccagatcagagacactcaacctgtacttgtacctcaatgttcagagcagcattattattttttgtttgtttgtttgtttggagacaga-tcttgctc-tgtcgcccaggatggagtgcagcggggtgatctcagatcactgcaacctccgcctccctggttcaagcgattctcctgactcagcctcccgagtagctgggactacaggcgcataccgccatgcccagctaatttttt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 808036 581 + 3010529 aaaatt----aggcgtggtggcatgagcatgtagtcccagct-------aAAA------AAAAAAAAAGGATT----CCTAAtccaaaatcctaaactttttgagtgctaacatgacaccacaagtagaaaacttcacatctgacctcatctgctggatcacagtcaaaaactgtgtttcatgcacaaaatgaataaaatattgcacaaaattaccgtcaggctatgtgtatcagggacgtatgaaacataaatgcatttcttgtataggctggggtcccatccccaagatatctcattatgtatatgcaaatattccaaaatcc-aaaaaaaatccaaaatctgaaacacttccggttccacgcagaaccagatcagagacactcaacctgtacttgtacctcaatgttcagagcagcattattAtttttggtttg-ttgtttgtttggagacagagtcttgctc-tgtcgcccaggctggagtgcagtggggcgatctcagatcactgcaacctccgcctccctggttcaagcgattctccttcctcagcctcccgagtagctgggactacaggcgcataccgccatgcccagctaatttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926210 578 + 163208435 aaaattagacaggcgtggtggcatgagcctgtagtcccagct-------aAAATAATTTAAAAAAAAAAGATTCCTACCTAAtccaaaatccgaaactttttgagtgctaacatgacaccacaagtagaaaacttcacatctgacctcatctgctggattgcagtc-aaaactgcgtttcatgcacaaaatgaataaaatattgtacaaaattaccgtcaggctatgtgtatcaggtacatatgaaacataaatgaatttctt------gctggggtcctatccccaagatatctcattatgtatatgcaaatattccaaaaccc-caaaaaagtccaaaatctgaaacacttctggttccaagcagaaccagatcagagacactcaatctgtacttgtacctcaatgttcagagcagcattattAttttttgt----ttgtttgtttggagaca-------gctc-tgtcgcccaggctggagtgcagtgtgacgatctcagatcactgcaacctccgccttcctgattcaagcgattctcctgcctcatcctcccaagtagctgggactacaggcgcacaccaccacgtccagctattttttt i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58257463 578 + 75399963 aaaattagacaggcgtggtggcatgagcctgtagtcccagct---TAAAAAAA------AAAAAAAAAGGATT----CCTaatccaaaatc-----ctttttgagtgctaacatgacaccacaagtagaaaacttcacatctgatctcatctgctggatcgcagtc-aaaactttgtttcattcataaaatgagtaaaatattgtacaaaattaccatcaggctacgtgtatcgggtacatatgaaacataaatgaatttcttgtataggctgaggtcccactcccaagatatctcattatgtatatgcaaatattccaaaatcc-aagaaaaatccaaaatctgaaacacttctgcttctaagcagaaccagatcagagacactgaacccgTATTTGTACCTCAATGTTCAGAGCAGCATTATTAttttgt------ttgcttgtttggagatggagtcttgctc-tgtcgcccaggctggagtgcagtggagcgatctcagatcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcccgagtagttggggctacaggtgcacactgccacactcagctaatgtttt i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21565014 557 - 44557958 aaaattagttgggcacggtggtgtgagcctgtagtcccagct---------aA------AAAAAAAAAGGATT----TGTAAtccaaaatagaaaactttttgagtactaatatgacaccacaagtggaaaactttacaactgacctgatctgttggatcacagtc-aaaact--atttcatgcataaaataaacagaatattgtacaaaattaccttcaggctacgtgtatatggtatgtatgaaacataaatgaatttcttatataggcttggatctcatcaccaagatatctcattacatatatgcaaatattccaaaatcc------------aaaatctgcaacacttttagtccaaagcagaaccagatc--agacactcaacctgTACTTGTACCTCAATGTTCAGAGAAGCATTATTA------------TTATGAtttttgagacagagtttcactcttgttacccaggatggagtgcaacggtgcaatctcagctcactgcaacctccgcctcctgggttcaaacaacttttctgcctcagcctcctgagtagctgggattacaggcacatgccaccatgcctggctaatttttt i calJac3.chr20 I 62 C 0 s saiBol1.JH378225 6377883 547 + 6628207 aaaattggctgggcatggtggtgtgagcctgtaatcccagct------TAAAA------AAAAAGAAAGGATT----TATAAtccaaaatagaaaactttttgagtgctaatatgacaccacaagtggaaaacttcacaattcacctgatctgctggatcaaagtc-aaaact--atttcatgcataaaataaacaaaatattgtacaaaattaccttcaggctacgtgtatatagtatatatgaaacacaaataaatttcttatataggctggggtcccatcgtcaagatatctcattatgtatatgcaaacattccaaaatcc------------aaaatctgaaacacttttggtcccaagcagaaccagatc--agacactcaaccAGCACTTGTACTTCAATGTTCAGAGAAGCATTAtt-------------tttttttttttgagacagagtttaactcttgttgcccaggatggagtgcaatggtgcaatctcagctcactgcaacctccgcctcccgggttcaaacaacacttctgcctcagcctcctgagtagctgggattacaggcacacgccaccatgcct------------ i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9312289 566 - 10531588 aaaattagctgggcatggtggtgtgagcctgtagtcccagct------aaaaaaaaaacaaaaaaaaaCGATT----TGCAAtccaaaatagaaaactttttgagtgttaatatgacgccacaagtggaaaacttcacaactgacctgatctgctggatcacagtc-aaaact--atttcatgcataaaataaacaaaatattgtacaaaatcaccttcaggctacatgcatatggtacatatgaaacataaatgaatttcttatatatgctggagtcctatcgccaagatatctcattacgtatatgcaaatattccaaaatcc------------aaaatctgaaacacttttggtcccaagcagaaccagatc--agacactcaacctgTACTTGTACCTCAATGTTCAGAGAAGCAttatta------------ttattttttctgagacagagtttcactcttgttgcccaggatggaatgcaatggtacaatctcagctcactgcaacctccgcctcccgggttcaaacaactcttctgcctcagcctcctgagtagctgggattacaggcacatgccaccatgcctggctaatttttt i aotNan1.NW_018500622v1 C 0 I 5227 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=161517.000000 s hg38.chr16_GL383557v1_alt 82473 128 + 89672 tgtattttagtagagacagagtttcaccatgttgcccaggctggtctggaactcctgagctcagccaatccacccgcatcggcctcccaaagtggtaggtttacaggcgtgagtcaccacgcccggct- s panTro5.chr16 21513974 127 - 81586097 tgtattttagtagagacagagtttcaccatgttgcccaggctggtctggaactcctgagctcagccaatccacccgcattggcctcccaaagtggtaggtttacaggcgtgagtcaccacgcccggc-- i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 808617 127 + 3010529 tgtattttagtagagacagagtttcaccatgttgcccaggctggtctggaactcctgagctcagccaatccacccacatcggcctcccaaagtgctaggtttacaggcatgagtcaccacgcccggc-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926788 127 + 163208435 tgtattttagtagagacagagtttcaccatgttgcccaggctggtctggaactcctgagctcagccaatccacccgcctcggcctcccaaagtggtaggtttacaggcgtgagccaccacgcccgac-- i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58258041 127 + 75399963 tgtattttagtagtgacagagtttcaccatgttgcccaggctggtctggaactcctgagctcagccaatccaccctcctcggcctcccaaagtggtaggtttacaggcataagtcaccacacacggc-- i chlSab2.chr5 C 0 C 0 s calJac3.chr20 21565571 126 - 44557958 --atttttagtacagatggggtttcaccatgttggccaggccagttttgaagtcctgacctcaggtgatcctcccgccttgacctcccaaaatggtgggattacaggtgtgagccaccatgtccagc-T i calJac3.chr20 C 0 I 4911 s saiBol1.JH378225 6378430 85 + 6628207 -------------------------------------------gtcttcaagtcccgacctcagatgatcctcccacctccgcctcccaaactggtgggattacaggtgtgcgccaccacatctggT-T i saiBol1.JH378225 C 0 I 4207 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=140851.000000 s hg38.chr16_GL383557v1_alt 82601 190 + 89672 tattattattattattattattattattattattattattattttgagctggagttgcactctgttgaccaggctggagtgcaatggcacgatctcagctcactgcaacgtctatctcccgggttcaagcaattctcccgcctcagcctcccaagtagctgggattacaggcacgcagcaccatgcaggc s panTro5.chr16 21514101 176 - 81586097 --------------ttattattattattattattattattattttgagctggaggtgcactctgttgaccaggctggagtgcaatggcacgatctcagctcactgcaacctctatctcccgggttcaagcaattctcccgcctcagcctcccaagtagctgggattacaggcacgcagcaccatgcaggc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 808744 174 + 3010529 --------------ttattattattattattattattatta--ttgagctggagttgcactctgttgaccaggctggagtgcaatggcacgatctcagctcactgcaacctctatctcccgggttcaagcaattctcccgcctcagcctcccaagtagctgggattacaggcatgcagcaccatgcaggc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53926915 167 + 163208435 --------------cTATTATTATTAtttttatt---------ttgagctggagttgcactctgttgaccaggctggagtgcaatggcacgatctcggctcaccgcaacctctacctcccaggttcaagcaattctcccacctcagcctcccaagtagctgggattacaggcacgcagcaccatgccagc i nomLeu3.chr2 C 0 C 0 s chlSab2.chr5 58258168 164 + 75399963 --------------ctattattattattatt------------ttgagctggagttgcactctgttgaccaggctggagtgcaaaggcacgatcttagctcactgcaacctctatctcccgggttcaagcaattctcccgccttagccttccaagtagctgggattacaggcgcgtaccaccatgccggc i chlSab2.chr5 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e otoGar3.GL873566 13741369 3834 + 13852661 I a score=5276.000000 s hg38.chr16_GL383557v1_alt 82791 16 + 89672 taatttttgtattttt s panTro5.chr16 21514277 15 - 81586097 taattttttt-ttttt i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 808918 13 + 3010529 taatttttgt---att i gorGor5.CYUI01000018v1 C 0 C 0 s chlSab2.chr5 58258332 16 + 75399963 taattttcgtattttt i chlSab2.chr5 C 0 I 732 s otoGar3.GL873566 13745203 16 + 13852661 TAATCCTTATATCCTC i otoGar3.GL873566 I 3834 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e nomLeu3.chr2 53927082 0 + 163208435 C a score=75437.000000 s hg38.chr16_GL383557v1_alt 82807 221 + 89672 ---ttttttttttttttgaggcagagtctcg-ctctgtcgcccaggctggagtgcagtggcgcgatcgc-actcaatgcaagctccgcctctctggttcacgcc-attctcctgcctcagcctcacgagtagctgggactacaggcgcccgccaccacacccggctaattttttgtattttttttttttagtagagatggggtttcaccatgttagccgggatggtc s panTro5.chr16 21514292 220 - 81586097 ---ttttttttttttttgaggcagagtctcg-ctctgtcgcccaggctggagtgcagtggcgcaatcgt-gctcactgcaagctccgcctctctggttcacgcc-attctcctgcctcagcctcacgagtagctgggactacaggcgcccgccaccacacccagctaattttttgta-tttttttttttagtagagatggggtttcaccatgttagccgggatggtc i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 808931 219 + 3010529 ---ttttttttttttttgaggcagagtctcg-ctctgtcgcccaggctggagtgcagtggcgcgactgc-gctcactgcaagctccgcctccctggttcacgcc-attctcctgcctcagcctcacgagtagctgggactacaggtgcccaccaccacacccggctaattttttgta--ttttttttttagtagagatggggtttcaccatgttagccaggatggtc i gorGor5.CYUI01000018v1 C 0 C 0 s otoGar3.GL873566 13745219 217 + 13852661 AAAACTACTTTCATTTTAATGCTGGCTTTCATTTTTGTAACGTAAACTCTACTGCCGAGGCGTCCTGATAgctcacagcaacctcaaattccggagctcaagttgattttcttgcctcagcctcccaaggagctgagactacaggggtacaccaccaaccccagctaattt--------ttctatttttagtagagatggggtctgac--tctttctcatgctggtc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e panPan2.chr16 21572779 3239 - 90481686 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58258348 732 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e nomLeu3.chr2 53927082 0 + 163208435 C a score=60178.000000 s hg38.chr16_GL383557v1_alt 83028 80 + 89672 -ttgatctcctgacctc--gtgatccacccgcctcggcctcccaaagtgctaggattacaggcgtgagccaccgcgcccggct s panTro5.chr16 21514512 80 - 81586097 -ttgatctcctgacctc--gtgatccacccgcctcggcctcccaaagtgctaggattacaggcgtgagccaccgcgcccggct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576018 80 - 90481686 -TTGATCTCCTGACCTC--gtgatccacccgcctcggcctcccaaagtgctaggattacaggcgtgagccaccgcgcccggct i panPan2.chr16 I 3239 C 0 s gorGor5.CYUI01000018v1 809150 80 + 3010529 -tcgatctcctgacctc--gtgatccacccgcctcggcctcccaaagtgctaggattacaggcgtgagccaccacgcccggct i gorGor5.CYUI01000018v1 C 0 C 0 s otoGar3.GL873566 13745436 83 + 13852661 ttaaaactcctgagctcaagcaatccatttacctcagcctcccagagtgctagtattataggtgcgagcTGTAATGCCTAGCC i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58258348 732 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e nomLeu3.chr2 53927082 0 + 163208435 C a score=350258.000000 s hg38.chr16_GL383557v1_alt 83108 403 + 89672 ------taatttttgt------------atttttagtagagacagggtttcatcatactggccaggc-tggtctcgaactcctgacctcaactgatccacccgccttggtctcccaaagtgctg--ggattacaggcgtgagccaccgcacctggccTAGagcagcattatttacaacagccgaaagatggaaacaacccaaacgtccactaatagatgaatggataaacagaacacacacacaaatattatgcagtcttagtaaggaatgaaatactgataatgctgcaagatggatgaaccttgagaac---aatatgctaag---taaaataagccag------atacaaaataacaaatgttataagcaaattcataggaacagaaagtagaatagaggtga---------------ccagaggctgagagaagggaggaatgagga s panTro5.chr16 21514592 403 - 81586097 ------taatttttgt------------atttttagtagagacagggtttcatcatactggccaggc-tggtctcgaactcctgacctcaactgatccacccgccttggtctcccaaagtgctg--ggattacaggcgtgagccaccgcacctggcctagagcagcattgtttacaacagccgaaagatggaaacaacccaaacgtccactaatagatgaatggataaacaaaacacacacacaaatattatgcagtcttagtaaggaatgaaatactgataatgctgcaagatggatgaaccttgagaac---aatatgctaag---taaaataagccag------atacaaaataacaaatgttataagcaaattcataggaacagaaagtagaatagaggtga---------------ccagaggctgagagaacggaggaatgagga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576098 403 - 90481686 ------taattgttgt------------atttttagtagagacagggtttcatcatactggccaggc-tggtctcgaactcctgacctcaactgatccacccgccttggtctcccaaagtgctg--ggattacaggcgtgagccaccgcacctggccTAGagcagcattgtttacaacagccgaaagatggaaacaacccaaacgtccactaatagatgaatggataaacaaaacacacacacaaatattatgcagtcttagtaaggaatgaaatactgataatgctgcaagatggatgaaccttgagaac---aatatgctaag---taaaataagccag------atacaaaataacaaatgttataagcaaattcataggaacagaaagtagaatagaggtga---------------ccagaggctgagagaacggaggaatgagga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 809230 402 + 3010529 ------taatttttgt------------atttttagtagagacagggtttcatcatactggccaggc-tggtctcgaactcctgacctcaactgatccacccgccttggtctcccaaagtgctg--ggattacaggcatgagccaccacacctggccTAGagcagcattatttacaacagccgaaagatggaaacaacccaaacgtcgactaatagacgaatggataaacaaaacacacacacaaatattatgcagtcttagtaaggaatgaaatactgataatgctgcaagatggatgaaccttgagaac---aatatgctaag---taaaataagccag------atacaaaataacaaatgttataagcaaattcata-gaacagaaagtagaatagaggtga---------------ccagaggctgagagaagggaggaatgagga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927082 391 + 163208435 ------taatttttgt------------attttttgtagagacagggtttcatcatactggccaggc-tggtctcgaactcctgacctcaactgatccacctgccttggtctcccaaagtgctg--ggattacagg------------cACCTGGCCTAGagcagcattatttacaacagccaaaagatggaaacaacccaaacatccattaatagatgaatggataaacaaaacacacacgcaagtattatgcagtcttagtaaggaatgaaatactggtaatgctacaagatggatgaaccttgagaac---aatatgctaag---taaaataagccag------atacaaaataacaaatgttataagcaaattcatagggacagaaagtagaatagaggtga---------------ccagaggctgagagaagggaggaatgagga i nomLeu3.chr2 C 0 C 0 s otoGar3.GL873566 13745519 394 + 13852661 TAACTCTAATTTTTATACATAAACGCTAACTTCGGGCAAGAAAAAAAAATTA-------ggccaagtgtaatgacacacgcttg--------taatccagc-actttgggaggccaa--tgctgaaggat------------------cacttg----aaggcaggagt-ttgagaccagcccgagcaagaacaagaccctgttg-ctactaaaaatagaaaaaactacctgggcacagtggagcatgct-tatagtcccagctactagcgaggt-----tgaggcaacaggattgctcaaacccaagagtttgaggttgctatgagctatgatatgacagcactctatccagggtgacagagactgt-------ctcaaa-aaaaagaaaggccaggaggagtggctcatgcctgtaatcccagcacttgggag-gtggaggaaagtgga i otoGar3.GL873566 C 0 I 297 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58258348 732 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=37352.000000 s hg38.chr16_GL383557v1_alt 83511 40 + 89672 ggtagtgtttaatgagtacaggtttctgtttgtggtgatg s panTro5.chr16 21514995 40 - 81586097 ggtagtgtttaatgagtacaggtttctgtttgtggtgatg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576501 40 - 90481686 ggtagtgtttaatgagtacaggtttctgtttgtggtgatg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 809632 40 + 3010529 ggtagtgtttaatgagtacaggtttctgtttgtggtgatg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927473 40 + 163208435 ggtagtgtttaacgagtacaggtttctgtttgtggtgatg i nomLeu3.chr2 C 0 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14497789 8476 + 26466322 I e rheMac8.chr20 21393152 2156 - 74971481 I e macFas5.chr20 21106050 2022 - 78541002 I e colAng1.NW_012123265v1 563321 10844 + 3907144 I e manLeu1.NW_012101698v1 6823792 1857 - 7209941 I e chlSab2.chr5 58258348 732 + 75399963 I e cerAty1.NW_011999143v1 20825594 2615 + 43916225 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e otoGar3.GL873566 13745913 297 + 13852661 I a score=801199.000000 s hg38.chr16_GL383557v1_alt 83551 153 + 89672 aaaaaattctgaaaatggatagtggtgata---gctgtacaacaacgtgaatgaactttattccactgaaatgtacacttttaaaatagtttaaaagtaaatAATG---TGGGGAGAATTACAAAACTAATGGTAAAAAGACTA-AAGTTTGGAATAtct s panTro5.chr16 21515035 153 - 81586097 aaaaaattctgaaaatggatagtggtgata---gctgtacgacaacgtgaatgaactttattccactgaaatgtacacttttaaaatagtttaaaagtaaatAATG---TGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAATAtct i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576541 153 - 90481686 aaaaaattctgaaaatggatagtggtgata---gctgtacgacaacgtgaatgaactttattccactgaaatgtacacttttaaaatagtttaaaagtaaatAATG---TGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAATAttc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 809672 153 + 3010529 aaaaaattctgaaaatggatagtggtgata---gctgtacaacaacgtgaatgaactttattccactgaaatgtacacttttaaaatagtttaaaAGTCAATAATG---TGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAATAtct i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927513 153 + 163208435 aaaaaattctgaaaatggatagtggtgata---gctgtacaacaacgtgaatgaactttattccactgaaatgtacacttttaaaatagtttaaaagtaaatAACG---TGGGGAGAATTACAAAACTAATGGTAAAAGGACTA-AAGTTTGGAAACTCt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395308 155 - 74971481 aaaaaattctgaaaatggatagtggtgataaatgctgttcaacaatgtgaatgaatt---ttccactgaaatgtacacttttaaaatagtttaaaagtaaatAAAGTATTGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTCGAAAAtc- i rheMac8.chr20 I 2156 C 0 s macFas5.chr20 21108072 155 - 78541002 aaaaaattctgaaaatggatagtggtgataaatgctgttcaacaatgtgaatgaatt---ttccactgaaatgtacacttttaaaatagtttaaaagtaaatAAAGTATTGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGGTTCGAAAAtc- i macFas5.chr20 I 2022 C 0 s macNem1.NW_012011355v1 14506265 155 + 26466322 aaaaaattctgaaaatggatagtggtgataaatgctgttcaacaatgtgaatgaatt---ttccactgaaatgtacacttttaaaatagtttaaaagtaaatAAAGTATTGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAAAAtc- i macNem1.NW_012011355v1 I 8476 C 0 s cerAty1.NW_011999143v1 20828209 156 + 43916225 aaaaaattctgaaaatggatagtggtgataaatgctgttcaacaatgtgaatgaatt---ttccactgaaatgtacacttttaaaatagtttaaaagtaaatAAAGTATTGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAAAAtct i cerAty1.NW_011999143v1 I 2615 C 0 s chlSab2.chr5 58259080 152 + 75399963 aaaaaattctgaaaatggatagtggtgacaaatgctgttcaacaacgtgaatgaatt---ttccactgaaatgtacacttttaaaatagttta-----aaatAAAGTATTGGGGAGAATTACAAAACTAATGGTAAAAAGACTGCAAGTTTGGAAAAtct i chlSab2.chr5 I 732 C 0 s manLeu1.NW_012101698v1 6825649 155 - 7209941 aaaaaattctgaaaatggatagtggtgataaatgctgttcaacaatgtgaatgaatt---ttccactgaaatgtacacttttaaaatagtttaaaagtaaatAAAGTATTGGGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAAAAtc- i manLeu1.NW_012101698v1 I 1857 C 0 s colAng1.NW_012123265v1 574165 156 + 3907144 aaaaaattctgaaaatggatagtggtgataaatgctgttcaacaacgtgaatgaatt---ttccactgaaatgtacacttttaaaatagtttaaaagtaaatAAAGTATTGCGGAGAATTACAAAACTAATGGTAAAAAGACTG-AAGTTTGGAAAAtct i colAng1.NW_012123265v1 I 10844 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e otoGar3.GL873566 13745913 297 + 13852661 I a score=477046.000000 s hg38.chr16_GL383557v1_alt 83704 97 + 89672 ttttttt-------tctttttttttttttg-agacagagtct----ctgttgcccaggctggagcacaacggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggt s panTro5.chr16 21515188 92 - 81586097 tttt------------tttttttttttttg-agacagagtct----ctgttgcccaggctggagcacaacggcacaatcttggctcactgcaa--------------------------------cctctgcctcccgggt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576694 93 - 90481686 tttt------------tttttttttttttgtagacagagtct----ctgttgcccaggctggagcacaacggcacaatcttggctcactgcaa--------------------------------cctctgcctcccgggt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 809825 90 + 3010529 ttt-------------tttttttttttttg-agacagagtct----ctgttgccc-ggctggaacacaacggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927666 104 + 163208435 tttattttattttatttttttatttttttg-agacagagtct----ctgttgcccaggctggagtgcaacggcacaatcttggctcactgcaa--------------------------------cctctgcctcctggat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395463 86 - 74971481 ------------------tttttttttttg-agacagagtct----ctgtcacccaggctggagtgcagcggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108227 86 - 78541002 ------------------tttttttttttg-agacagagtct----ctgtcacccaggctggagtgcagcggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506420 86 + 26466322 ------------------tttttttttttg-agacagagtct----ctgtcacccaggctggagtgcagcggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828365 86 + 43916225 ----------------tttttttttttttg-agac--agtct----ctgtcgcccaggctggagtgcaacggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259232 88 + 75399963 ----------------tttttttttttttg-agacagagtct----ctgtcacccaggctggagtacaatggcacaatctcggctcactgcaa--------------------------------cctctgcctcccCAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6825804 87 - 7209941 -----------------ttttttttttttg-agacagagtct----ctgtcacccaggctggagtgcagcggcacaatctcggctcactgcaa--------------------------------cctctgcctcccgggA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574321 88 + 3907144 ----------------tttttttttttttt-agacggagtct----ctgtcacccaggctggagtgcaacggcacaatctcagctcactgcaa--------------------------------cctctgcctcccaggA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746210 130 + 13852661 -------tgttctttttttttttttttttg-agacagagtctcaagctggtgccctgggtagactgctgtggc---ctcacagctcacagcaacctcaaactcttaggcttaagcaattctcttgcctcagcctcccaagt i otoGar3.GL873566 I 297 I 156 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=362258.000000 s hg38.chr16_GL383557v1_alt 83801 63 + 89672 tgaactgcttgaaatattttaccagttccctcattaaggaattacagaaaatcggacttattt s panTro5.chr16 21515280 63 - 81586097 tgaactgcttgaaatattttaccagttccctcattaaggaattacagaaaatcggacttattt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576787 63 - 90481686 tgaactgcttgaaatattttaccagttccctcattaaggaattacagaaaatcggacttattt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 809915 63 + 3010529 tgaactgcttgaaatattttaccggttccctcattaaggaattacagaaaatctgacttattt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927770 63 + 163208435 tgaactgcttgaaatatcttactggttccttcattaaggagttacagaaaatctgacttattt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395549 63 - 74971481 TGAACTCCCTGAAATatcttactggttccctcaacaatgaattacagaaaatctgacttattt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108313 63 - 78541002 TGAACTCCCTGAAATatcttattggttccctcaacaatgaattacagaaaatctgacttattt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506506 63 + 26466322 TGAACTCCCTGAAATatcttactggttccctcaacaatgaattacagaaaatctgacttattt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828451 63 + 43916225 TGAACTCCCTGAAATatcttactggttccctcaacaatgaattacagaaaatctgacttattt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259320 63 + 75399963 tgaactccttgaaatatcttactggttccatcaataatgaattacagaaaatctgacttattt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6825891 63 - 7209941 TGAACTCCCTGAAATatcttactggttccctcaacaatgaattacagaaaatctgacttattt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574409 63 + 3907144 tgaactccttgaaatatcttaccgcttccctcaataaggaattacagaaaatctgacttattt i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746496 51 + 13852661 tgaactgcttaaaatatcctactggttccctcattaaCATATTACAGACAA------------ i otoGar3.GL873566 I 156 C 0 e canFam3.chr5 80489214 3414 + 88915250 I e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=828691.000000 s hg38.chr16_GL383557v1_alt 83864 128 + 89672 ccatttcatacttgtatgaatcatgattataacttttttCTGCCTAATCatcatttagtaacctttttcacagat-aaggaaaccagagctccaaagggtttaaagccatgacaaaca----cggccatctgg s panTro5.chr16 21515343 128 - 81586097 ccatttcatacttgtatgagtcatgattataacttttttCTGCCTAATCatcatttagtaacctttttcacagat-aaggaaaccagagctccaaagggtttaaagccatgacaaaca----cggccatctgg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576850 128 - 90481686 ccatttcatacttgtatgagtcatgattataacttttttCTGCCTAATCATCATTTAGTAACCTTTTTCACAGAT-AAGGAAACCAGAGCTCCAAAGGGTTTAAAGCCATGACAAACA----CGGCCATCTGG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 809978 128 + 3010529 ccatttcatacttgtatgaatcatgattataacttttttCTGCCTAATCATCATTTAGTAACCTTTTTCACAGAT-AAAGAAACCAGAGCTCCAAAGGGTTTAAAGCGATGACAAACA----CGGCCATCTGG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927833 126 + 163208435 ccatttcatacttgtatgaatcatgattataac--ttttctgcctaatcatcatttaGTAACCTTTTTCACAGAT-AAGGAAACCAGAGCTCCAAAGGGTTTAAAGGCATGACAAACA----CAGCCATCTGG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395612 128 - 74971481 ccatttcatacttgtatgaatcatgattataacttcttTCTGTCTAATCATCATTTAGTAACTTTTTTCACAGAT-AAGGAAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----TGGCCATCTGG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108376 128 - 78541002 ccatttcatacttgtatgaatcatgattataacttcttTCTGTCTAATCATCATTTAGTAACTTTTTTCACAGAT-AAGGAAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----TGGCCATCTGG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506569 128 + 26466322 ccatttcatacttgtatgaatcatgattttaacttcttTCTGTCTAATCATCATTTAGTAACTTTTTTCACAGAT-AAGGAAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----TGGCCATCTGG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828514 128 + 43916225 ccatttcatacttgtatgaatcatgattataacttcttTCTGTCTAATCATCATTTAGTAACTTTTTTCACAGAT-AAGGAAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----TGGTCATCTGG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259383 128 + 75399963 ccatttcatacttgtatgaatcatgattataacttttttCTGTCTAATCATCATTTAGTAACTTTTTTCACAGAT-AAGGAAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----TGGCCATCTGG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6825954 128 - 7209941 ccatttcatacttgtataaatcatgattataacttcttTCTGTCTAGTCATCATTTAGTAACTTTTTTCACAGAT-AAGAAAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----TGGCCATCTGG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574472 128 + 3907144 ccatttcatacttgtatgaatcatgattgtaacttttttCTGTCTCATCATCATTTAGTAACTTTTTTCACAGAT-AAGGGAACCAGAGTTCCAAAGGGCTTAAAGACATGACAAACA----CGGCCATCTGG i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746547 120 + 13852661 ------------TGTGTGAGTCATGATTTTAACTTTCTTTCTCTTGATCATCATTTAATAACCCTTTTCACAGATGAAGGAAACCGGAGCTCCATA-GGTTTAGAAACTTGACAAAGAATTGAAGCCATCTGT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80492628 91 + 88915250 CCACTTCATGTTCGTATGAATGATT-TTTTATCTTTTTTCCCCCTA---ATCATTTAATAGCTCTTCACACAGGT-AAGGAAACTGGAACTTCAAA------------------------------------- i canFam3.chr5 I 3414 C 0 e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e dasNov3.JH569970 955957 24149 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=680677.000000 s hg38.chr16_GL383557v1_alt 83992 97 + 89672 ctccaaagcctgtgctctgggaacaccacactgccTTAACCTTATGCCAACTCT-----------CTTGCAGGGTCATGACTGTGTACCAGAAAGGAAAGCATTTTCC s panTro5.chr16 21515471 97 - 81586097 ctccaaagcctgtgctctgggaacaccacactgccTTAACCTTATGCCAACTCT-----------CTTGCAGGGTCATGACTGTGTACCAGAAAGGAAAGCATTTTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21576978 97 - 90481686 CTCCAAAGCCTGTGCTCTGGGAACACCACACTGCCTTAACCTTATGCCAACTCT-----------CTTGCAGGGTCATGACTGTGTACCAGAAAGGAAAGCATTTTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810106 96 + 3010529 C-CCAAAGCCTGTGCTCTGGGAACACCACACTGCCTTAACCTTATGCCAACTCT-----------CTTGCAGGGTCATGACTGTGTACCAGAAAGGAAAGCATTTTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53927959 97 + 163208435 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTTATGCCAACTCT-----------CTTGCAGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395740 97 - 74971481 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAACTCC-----------TTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108504 97 - 78541002 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAACTCC-----------TTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506697 97 + 26466322 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAACTCC-----------TTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828642 97 + 43916225 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAACTCC-----------TTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259511 97 + 75399963 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAACTCC-----------TTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826082 97 - 7209941 CCCCAAAGACTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAACTCC-----------TTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574600 97 + 3907144 CCCCAAAGCCTGTGCTCTGGGCACACCACACTGCCTTAACCTCATGCCAGCTCC-----------CTTGTGGGGTCATGACTGTGTAGCAGAAAGGAAAGCATTTTCC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746667 107 + 13852661 TTCCATACCCCGGGGTCTCGGTAGACCATACTAAATTAATCTTGTGCCAGCTCTC-TTGAAGTCACTTGCAGGCACATGATGGTAGAGAAAAAAAAAATGGATATCTG i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80492719 101 + 88915250 ------AGCCTTTGCTCTGGGCACACCATACCACCTCAACCTTATGCCAGTTCTCTTTGAGGTAACTTGTAGGCACATGATGGTG-AGAAGGAAGGAAAGCTTATCTG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 980106 103 + 1009443 CTCTAACATCTGTGTTTTGGGTGTGCAACACTGCCTCAACCTTGTACCAGCTTT----GAGATCATTTGCAGGTACATG-TGATGGAGAAGAAAGGAAAGCTTATCTG i dasNov3.JH569970 I 24149 C 0 e micMur3.chr20 54959634 2309 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2966117 2787 + 9850184 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=721926.000000 s hg38.chr16_GL383557v1_alt 84089 77 + 89672 AAGGACAGCACATAAGGTGGCCCTGAGGAGCCTCTCCCTCTTCTC---TAAAGAC-----------ACTACTTAAAAACCATTAGCCTAAG s panTro5.chr16 21515568 77 - 81586097 AAGGACAGCACATAAGGTGGCCCTGAGGAGCCTCTCCCTCTTCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577075 77 - 90481686 AAGGACAGCACATAAGGTGGCCCTGAGGAGCCTCTCCCTCTTCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810202 77 + 3010529 AAGGACAGCACATAAGGTGGCCCTGAGGAGCCTCTCCCTCTTCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928056 77 + 163208435 AAGGACAGCACATAAGGTGGCCCTGAGGAGCCTCTCCCTCATCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGGCCAAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395837 77 - 74971481 AAGGACAGCACATAAGGTGGCTCTGAGGAGCCGCTCCCTCATCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108601 77 - 78541002 AAGGACAGCACATAAGGTGGCTCTGAGGAGCCACTCCCTCATCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506794 77 + 26466322 AAGGACAGCACATAAGGTGGCTCTGAGGAGCCGCTCCCTCATCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGTCTAAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828739 77 + 43916225 AAGGACAGCACATAAGGTGGCTCTGAGGAGCCGCTCCCTCATCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259608 77 + 75399963 AAGGACAGCACATAAGGTGGCTCTGAGGAGCCTCTCCCTCTTCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826179 77 - 7209941 AAGGACAGCACATAAGGTGGCTCTGAGGAGCCGCTCCCTCATCTC---TAAAGAC-----------ACTACTCGAAAACCATTAGCCTAAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574697 77 + 3907144 AAAGACAGCACGTAAGGTGGCTCTGAGGAGCCTCTCCCTCATCTC---TAAAGAC-----------ACTACTTGAAAACCATTAGCCTAAG i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54961943 77 + 72247402 AAGGACAGCACATAAGGTGGCCCTGACCCACCTGTCCCTCAACTC---TAAAGAT-----------TCTATTTGAAAACCATTAGCCCAAG i micMur3.chr20 I 2309 C 0 s proCoq1.NW_012152729v1 2968904 76 + 9850184 AAGGACGGCACATAA-GTGGCCCTGACCAGCCTGTCCCTCATCTC---TAAAGAT-----------TCTATTTGAAAAGCATTAGCCCAAG i proCoq1.NW_012152729v1 I 2787 C 0 s otoGar3.GL873566 13746774 88 + 13852661 AAGGACAGCACATAATGTGGCCCTAACCAGCTTCTCCCTTACCTT---TAAAGATACACCACCAAGCCCATTTGCAAACCATTAGCCCAAT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80492820 76 + 88915250 AAGGTCAGCATATAAGGTAGCCCAGACCAGCCTCTCACTT-CCTG---TAAGATT-----------ACTATTTGAAAACCATTATCCTggg i canFam3.chr5 C 0 I 173 s dasNov3.JH569970 980209 73 + 1009443 AAAGGCAGCACATAAGGCTGCCTTGACCAGCCTCTCCCTCACCTCTTTTAAGGAT-----------ATCTCTAAAAAGACAATG------- i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=155785.000000 s hg38.chr16_GL383557v1_alt 84166 18 + 89672 ACAAAAGTGGACATACCC s panTro5.chr16 21515645 18 - 81586097 ACAAAAGTGGACATACCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577152 18 - 90481686 ACAAAAGTGGACATACCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810279 18 + 3010529 ACAAAAGTGGACATACCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928133 18 + 163208435 ACAAAAGCAGACATACCC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395914 18 - 74971481 ACAAAAGTGGACATACCC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108678 18 - 78541002 ACAAAAGTGGACATACCC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506871 18 + 26466322 ACAAAAGTGGACATACCC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828816 18 + 43916225 ACAAAAGTGGACATACCC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259685 18 + 75399963 ACAAAAGTGGACATACCC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826256 18 - 7209941 ACAAAAGTGGACATACCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574774 18 + 3907144 ACAAAAGTGGACCTACCC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54962020 18 + 72247402 ATGAAAGTGGAGATACAA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2968980 18 + 9850184 ATGAAAGTGGAGATACAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13746862 18 + 13852661 ACAAAAATAGAGATAGAA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80493069 18 + 88915250 GCAAAAGTGGAGATACTG i canFam3.chr5 I 173 C 0 s dasNov3.JH569970 980282 18 + 1009443 Agggaagcggacttggcc i dasNov3.JH569970 C 0 I 417 e mm10.chr8 22495301 1447 - 129401213 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=348571.000000 s hg38.chr16_GL383557v1_alt 84184 37 + 89672 AGCAGCTTAGGAACTCAAACAC--TC-CCCCACCTCCAAC s panTro5.chr16 21515663 37 - 81586097 AGCAGCTTAGGAACTCAAACAC--TC-CCCCACCTCCAAC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577170 37 - 90481686 AGCAGCTTAGGAACTCAAACAC--TC-CCCCACCTCCAAC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810297 37 + 3010529 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTCCAAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928151 37 + 163208435 AGCAGCTTAGGAACTCAAACAC--TT-CCCCACCTCCAAC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395932 37 - 74971481 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTGCAAC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108696 37 - 78541002 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTGCAAC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506889 37 + 26466322 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTGCAAC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828834 37 + 43916225 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTGCAAC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259703 37 + 75399963 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTGCAAC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826274 37 - 7209941 AGCAGCTTAGGAACTCAAACAC--TC-CCCAACCTGCAAC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574792 37 + 3907144 AGCAGCTTAGGAACTCAAACAC--TC-CCCAATCTCCAAC i colAng1.NW_012123265v1 C 0 C 0 s micMur3.chr20 54962038 35 + 72247402 AGAAGCTTAGGAACTC--ACTC--TC-CCCCACCTCCAAC i micMur3.chr20 C 0 I 1558 s proCoq1.NW_012152729v1 2968998 35 + 9850184 AGAAGCTTAGGAACTC--ACTC--TT-CCCCACCTCCAAC i proCoq1.NW_012152729v1 C 0 I 1999 s otoGar3.GL873566 13746880 31 + 13852661 AGCAGCTTAAGA------AGGC--TT-CTCTACCTCCAAC i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80493087 39 + 88915250 AGCAACTTAGGAGCTCACAGACTGTT-CCCCATCTCCAAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 980717 38 + 1009443 AGCAGTTTAGGAGCTCAAACAT--TCTTCCTACCTCCAAC i dasNov3.JH569970 I 417 C 0 e mm10.chr8 22495301 1447 - 129401213 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=117973.000000 s hg38.chr16_GL383557v1_alt 84221 19 + 89672 GACACAGTTTACTTAATTT s panTro5.chr16 21515700 19 - 81586097 TACACAGTTTACTTAATTT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577207 19 - 90481686 TACACAGTTTACTTAATTT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810334 19 + 3010529 TACACAGTTTACTTAATTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928188 19 + 163208435 TACACAGTTTACTTACTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395969 19 - 74971481 TACACAGTTTACTTCATTT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108733 19 - 78541002 TACACAGTTTACTTCATTT i macFas5.chr20 C 0 I 182 s macNem1.NW_012011355v1 14506926 19 + 26466322 TACACAGTTTACTTCATTT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828871 19 + 43916225 TACACAGTTTACTTCATTT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259740 19 + 75399963 TACACAGTTTACTTCATTT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826311 19 - 7209941 TACACAGTTTACTTCATTT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574829 19 + 3907144 TACACAGTTTACTTCATTT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746911 18 + 13852661 -TGTTTGTTCATTTAACTT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80493126 16 + 88915250 TAAACAGTTCATCTAC--- i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 980755 19 + 1009443 TAAACAGTTCATTTAATAC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=5598.000000 s hg38.chr16_GL383557v1_alt 84240 2 + 89672 AC s panTro5.chr16 21515719 2 - 81586097 AC i panTro5.chr16 C 0 I 3 s panPan2.chr16 21577226 2 - 90481686 AC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810353 2 + 3010529 AC i gorGor5.CYUI01000018v1 C 0 I 3 s nomLeu3.chr2 53928207 2 + 163208435 AT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21395988 1 - 74971481 -C i rheMac8.chr20 C 0 I 19 s macNem1.NW_012011355v1 14506945 1 + 26466322 -C i macNem1.NW_012011355v1 C 0 I 1 s cerAty1.NW_011999143v1 20828890 2 + 43916225 CC i cerAty1.NW_011999143v1 C 0 I 8 s chlSab2.chr5 58259759 2 + 75399963 CC i chlSab2.chr5 C 0 I 15 s manLeu1.NW_012101698v1 6826330 2 - 7209941 CC i manLeu1.NW_012101698v1 C 0 I 5 s colAng1.NW_012123265v1 574848 2 + 3907144 CC i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746929 2 + 13852661 AC i otoGar3.GL873566 C 0 I 2 s canFam3.chr5 80493142 2 + 88915250 CC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 980774 2 + 1009443 AC i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macFas5.chr20 21108752 182 - 78541002 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=99359.000000 s hg38.chr16_GL383557v1_alt 84242 21 + 89672 ----aaaaaaaaaaag---------aaaaagaaa s panTro5.chr16 21515724 21 - 81586097 ----aaaaaaaaaaag---------aaaaagaaa i panTro5.chr16 I 3 C 0 s panPan2.chr16 21577228 19 - 90481686 ----aaaaaagaaaag---------aaaa--gaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810358 21 + 3010529 ----aaaaaaaaaaga---------aaaaagaaa i gorGor5.CYUI01000018v1 I 3 C 0 s nomLeu3.chr2 53928209 21 + 163208435 ----aaaaaaaaaaag---------aaaaagaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396008 30 - 74971481 ----aaaaaaaaaaaaCCcaacaacaacaacaaa i rheMac8.chr20 I 19 C 0 s macFas5.chr20 21108934 30 - 78541002 ----aaaaaaaaaaaaCCcaacaacaacaacaaa i macFas5.chr20 I 182 C 0 s macNem1.NW_012011355v1 14506947 30 + 26466322 ----aaaaaaaaaaaaaccaacaacaacaacaaa i macNem1.NW_012011355v1 I 1 C 0 s cerAty1.NW_011999143v1 20828900 30 + 43916225 ----aaaaacaaaaaacccaacaacaacaacaaa i cerAty1.NW_011999143v1 I 8 C 0 s chlSab2.chr5 58259776 30 + 75399963 ----aaaaaaaaaaaactcaacaacaacaacaaa i chlSab2.chr5 I 15 C 0 s manLeu1.NW_012101698v1 6826337 30 - 7209941 ----aaaaaaaaaaaacccaacaacaacaacaaa i manLeu1.NW_012101698v1 I 5 C 0 s colAng1.NW_012123265v1 574850 29 + 3907144 -----aaaaaaaaaaacccaacaacaacaacaaa i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746933 21 + 13852661 ----AAAAAAAAAAAA---------AAAAAGAGA i otoGar3.GL873566 I 2 C 0 s canFam3.chr5 80493144 21 + 88915250 ----aaaaaaaaaaaa---------aaaaaaaaa i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 980776 21 + 1009443 CATTAAAAGGGGGAGG---------GGGAA---- i dasNov3.JH569970 C 0 I 1139 e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=38870.000000 s hg38.chr16_GL383557v1_alt 84263 6 + 89672 aagaaa s panTro5.chr16 21515745 6 - 81586097 aagaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577247 6 - 90481686 aagaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810379 6 + 3010529 aagaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928230 6 + 163208435 aagaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396038 6 - 74971481 aagaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108964 6 - 78541002 aagaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506977 6 + 26466322 aagaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828930 6 + 43916225 aagaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259806 6 + 75399963 aagaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826367 6 - 7209941 aagaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574879 6 + 3907144 aagaaa i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13746954 4 + 13852661 GAGA-- i otoGar3.GL873566 C 0 I 2358 s canFam3.chr5 80493165 6 + 88915250 aaaaaa i canFam3.chr5 C 0 C 0 e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=92574.000000 s hg38.chr16_GL383557v1_alt 84269 14 + 89672 aagccaggggcggt s panTro5.chr16 21515751 14 - 81586097 aagccaggggcggt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577253 14 - 90481686 aagccaggggcggt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810385 14 + 3010529 aagccaggggcggt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928236 14 + 163208435 aagccaggggcggt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396044 14 - 74971481 aagccagaggtggt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108970 14 - 78541002 aagccagaggtggt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506983 14 + 26466322 aagccagaggtggt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828936 14 + 43916225 aagccagaggtggt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259812 14 + 75399963 aagccagaggtggt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826373 14 - 7209941 aagccagaggtggt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574885 14 + 3907144 aagccagaggtggt i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13749316 14 + 13852661 Aggccaggtgaggt i otoGar3.GL873566 I 2358 C 0 s canFam3.chr5 80493171 14 + 88915250 aaaGGTGGGGCAGT i canFam3.chr5 C 0 I 2456 e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=1124422.000000 s hg38.chr16_GL383557v1_alt 84283 185 + 89672 ggctcatgcctgtattttcagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcaaaaccagccatggtaaaacccagtctctactacaattacaaaaattagcctggcatggtggcatgcacctgtaatcctagctacttgggaggctgagtcaggagaatcgcttgaacc s panTro5.chr16 21515765 185 - 81586097 ggctcatgcctgtattttcagcactttgagaggccgaggctggtggatcacctgaggtcaggagttcaaaaccagccatggtaaaacccagtctctactacaattacaaaaattagcctggcatggtggcatgcacctgtaatcctagctacttgggaggctgagtcaggagaatcgcttgaacc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577267 185 - 90481686 ggctcatgcctgtattttcagcactttgagaggccgaggctggtggatcacctgaggtcaggagttcaaaaccagccatggtaaaacccagtctctactacaattacaaaaattagcctggcatggtggcatgcacctgtaatcctagctacttgggaggctgagtcaggagaatcgcttgaacc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810399 185 + 3010529 gtctcatgcctgtattttcagcactttgggaggccgaggctggtggatcacctgaagtcaggagttcaaaaccagccatggtaaaacccagtctctactaaaattacaaaaattagcctggcatgcttgcatgcacctgtaatactaactacttgggaggctgagtcaggagaatcgcttgaacc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53928250 185 + 163208435 ggctcatgcctttaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagttcaaaaccagccatggtaaaacccagtctctactaaaattacaaaaattagcctggcgtggtggcatgcacctgtaatcctagctacttgggaggctgagtcaggagaatcgcttgaacc i nomLeu3.chr2 C 0 M 1487 s rheMac8.chr20 21396058 184 - 74971481 ggctcatgcctgtattttcagcacttcgggaggctgaggcaggcggatcacctgaggtgaggagttc-aaaccagccatggtaaaatccagtctctactaaaaatactaaaattagcctggcatggtagcatgcgcctgtaatcccagctacttgggaggctgagtcaggagaattgtttgaacc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21108984 184 - 78541002 ggctcatgcctgtattttcagcacttcgggaggctgaggcaggcggatcacctgaggtgaggagttc-aaaccagccatggtaaaatccagtctctactaaaaatacaaaaattagcctggcatggtagcatgcgcctgtaatcccagctacttgggaggctgagtcaggagaattgtttgaacc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14506997 184 + 26466322 ggctcatgcctgtattttcagcacttcgggaggctgaggcaggcggatcacctgaggtgaggagttc-aaaccagccatggtaaaatccagtctctactaaaaatacaaaaattagcctggcatggtagcatgcgcctgtaatcccagctacttgggaggctgagtcaggagaattgtttgaacc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20828950 184 + 43916225 ggctcatgcctgtattttcagcacttcgggaggctgaggcaggcagatcacctgaggtgaggagttc-aaaccagccatggtaaaatccagtctctactaaaaatacaaaaattagcctggcgtggtagcatgcgcctgtaatcccagctacttgggaggctgagtcaggagaattgtttgaacc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58259826 184 + 75399963 ggctcatgccggtattttcagcacttcgggaggctgaggcgggcggatcacctgaggtcaggagttc-aaaccagccatggtaaaatccagtctctactaaaattacaaaaattagcctggcgtggtagcatgcgactgtaatcccagctactcgggaggctgagtcaggagaattgtttgaacc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826387 184 - 7209941 ggctcatgcctgtattttcagcacttcgggaggctgaggcaggcggatcacctgaggtgaggagttc-aaaccagccatggtaaaatccagtctctactaaaaatacaaaaattagcctggcgtggtagcatgcgcctgtaatcccagctacttgggaggctgagtcaggagaattgtttgaatc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 574899 184 + 3907144 ggctcatgcctgcattttcagcacttcaggaggctgaggcgggcggatcacccgaggtcaggagttc-aaaccggccatggtaaaatccagtctctactaaaattacaaaaattagcctggcatggtagcatgtgcctgtaatcccagctactcgggaggctgagtcaggagaattgtttgaacc i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13749330 179 + 13852661 ggctcatgcctgtaatactagcactctgggagactgaggtgggtgggctgcctcagctcacgagtttaagatcagcctgagcaaaagcaagaccct------gtctctaaaaatagccaggcactgtggcaggcacctatagtccctgctactcgggagggttaggcagaaggattgtttgagcc i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I a score=305705.000000 s hg38.chr16_GL383557v1_alt 84468 61 + 89672 caggagacagaggttgtagtgagccgagactgcaccactgcactccagcctgggagacaga s panTro5.chr16 21515950 61 - 81586097 caggagacagaggttgtagtgagccgagattgcaccactgcactccagcctgggagacaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577452 61 - 90481686 caggagacagaggttgtagtgagccgagattgcaccactgcactccagcctgggagacaga i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810584 61 + 3010529 caggagacagaggttgtagtgagccgagattgcaccactgcactccagcctgggagacaga i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396242 61 - 74971481 caggagacggaggtcgtagtgagtcgagattgtatcactacactccagcctgggcgacaga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109168 61 - 78541002 caggagacggaggttgtagtgagtcgagattgaatcactgcactccagcctgggcgacaga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507181 61 + 26466322 caggagacggaggttgtagtgagtcgagattgtatcactgcactccagcctgggcgacaga i macNem1.NW_012011355v1 C 0 M 560 s cerAty1.NW_011999143v1 20829134 61 + 43916225 caggagacggaggttgtagtgagtcgagattgcatcactgcactccagcctgggcgacaga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260010 61 + 75399963 caggagacggaggttgtagtgagtcgagattgcatcactgtactccagcctgggcgacaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826571 61 - 7209941 caggagacggaggttgtagtgagtcgagattgcatcactgcactccagcctgggcgacaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575083 61 + 3907144 caggagacggaggttgtagtgagtcgagactgcaccactgcactccagcctgggcgacaga i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13749509 58 + 13852661 taagactttgaggttgctgtgagctatgat---gccaaggcactcgacttagggcaaaaca i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e nomLeu3.chr2 53928435 1487 + 163208435 M a score=142722.000000 s hg38.chr16_GL383557v1_alt 84529 45 + 89672 gtgagagactgtctcaaaaaaaT--------------------TTTTTAAAAAGGGTAGTTTTCT s panTro5.chr16 21516011 45 - 81586097 gtgagagactgtctcaaaaaaaT--------------------TTTTTTAAAAGGGTAGTTTTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577513 45 - 90481686 gtgagagactgtctcaaaaaaaT--------------------TTTTTAAAAAGGGTAGTTTTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810645 43 + 3010529 gtgagagactgtctcaaaaaaaT--------------------TTTTT--AAAGAGTAGTTTTCT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396303 42 - 74971481 --acgagactgtctcaaaaaaaa---------------------TTTTTTTAAGGGTAGTCTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109229 44 - 78541002 --acgagactgtctcaaaaaaaaa-------------------TTTTTTTTAAGGGTAGTCTTCT i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20829195 43 + 43916225 --acgagactgtctcaaaaaaaT--------------------TTTTTTTAAAGGGTAGTCTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260071 43 + 75399963 --acgagactgtctcaaaaaaaa--------------------TTTTTTTAAAGGTTAGTCTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826632 43 - 7209941 --ccgagactgtctcaaaaaaaa--------------------TTTTTTTAAAGGGTAGTCTTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575144 43 + 3907144 --acgagactgtctcaaaaaaaT--------------------TTTTTTTAAAGGGTAGTCTTCT i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13749567 63 + 13852661 --gtgagactatctaaaaaaaaaaaaaaTTAgggtggtgcctgtggttcaaaagggtagggtacc i otoGar3.GL873566 C 0 I 418 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14507242 560 + 26466322 M e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e nomLeu3.chr2 53928435 1487 + 163208435 M a score=292338.000000 s hg38.chr16_GL383557v1_alt 84574 73 + 89672 CAAAGTCCCATCCAGAGAGAGATTTGGAAGACAAGGACTTCTCCTTTACTCTGTATTCTCTTTCTCTTAGGTG s panTro5.chr16 21516056 73 - 81586097 CAAAGTCCCATCCAGAGAGAGATTTGGAAGACAAGGACTTCTCCTTTACTCTGTATTCTCTTTCTCTTAGGTG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577558 73 - 90481686 CAAAGTCCCATCCAGAGAGAGATTTGGAAGACAAGGACTTCTCCTTTACTCTGTATTCTCTTTCTCTTAGGTG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810688 73 + 3010529 CAAAGTCCCATCCAGAGAGAGAATTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTCTTTCTCTTAGGTG i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396345 73 - 74971481 TAAAGTCCCATCCAGAAAGAGATTTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTATTTCTCTTAGGTG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109273 73 - 78541002 TAAAGTCCCATCCAGAAAGAGATTTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTATTTCTCTTAGGTG i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20829238 73 + 43916225 TAAAGTCCCATCCAGAAAGAGATTTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTATTTCTCTTAGGTG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260114 73 + 75399963 TAAAGTCCCATCCAGAAAGAGATGTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTATTTCTCTTAGATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826675 73 - 7209941 TAAAGTCCCATCCAGAAAGAGATTTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTATTTCTCTTAGGTG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575187 73 + 3907144 TAAAGTCCCATCCAGAAAGAGATTTGGAAGGCAAGGACTTCTCCTTTACTCTGTATTCTATTTCTCTTAGGTG i colAng1.NW_012123265v1 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14507242 560 + 26466322 M e saiBol1.JH378225 6378515 4207 + 6628207 I e calJac3.chr20 21565697 4911 - 44557958 I e otoGar3.GL873566 13749630 418 + 13852661 I e nomLeu3.chr2 53928435 1487 + 163208435 M a score=120114.000000 s hg38.chr16_GL383557v1_alt 84647 39 + 89672 AAatc------attattattattattattattgttatttgagatg s panTro5.chr16 21516129 45 - 81586097 AAATCattattattattattattattattattgttatttgagatg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577631 39 - 90481686 AAatc------attattattattattattactgttatttgagatg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810761 45 + 3010529 AAATCattattattattattattattattattgttatttgagatg i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396418 35 - 74971481 AA---------attattattattattattaatatta-ttgagatg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109346 35 - 78541002 AA---------attattattattattattaatatta-ttgagatg i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20829311 41 + 43916225 AAATC---attattattattattattattaatatta-ttgagatg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260187 44 + 75399963 AAATCattattattattattattattattaatatta-ttgagatg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826748 44 - 7209941 AAATCattattattattattattattattaatatta-ttgagatg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575260 38 + 3907144 AAatc------attattattattattattaatatta-ttgagatg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570608 39 - 44557958 AAATA------ATTAACTCttctgttttttttgttttttgacaca i calJac3.chr20 I 4911 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14507242 560 + 26466322 M e saiBol1.JH378225 6378515 4207 + 6628207 I e otoGar3.GL873566 13749630 418 + 13852661 I e nomLeu3.chr2 53928435 1487 + 163208435 M a score=999850.000000 s hg38.chr16_GL383557v1_alt 84686 200 + 89672 gagtcctgcttttgtcgcccaggctggagggcaatggcat-gatctcggctcactgcaacctccgactcccgggttcaagtgattctcctgcctcagtctc-ccaagtagatgggattataggcgcccaccaccacgcccagctaa-tttttgcatttttagtagagacagggtttcaccatgttgaccaggctcgtcttgaa s panTro5.chr16 21516174 200 - 81586097 gagtcctgcttttgtcgcccaggctggagggcaatggcat-gatctcggctcactgcaacctccgactcccaggttcaagtgattctcctgtctcagtctc-ccaagtagatgggattataggcgcccaccaccacacccagctaa-tttttgcatttttagtagagacagggtttcaccatgttgaccaggctggtcttgaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577670 200 - 90481686 gagtcctgcttttgtcgcccaggctggagggcaatggcat-gatctcggctcactgcaacctccgactcccaggttcaagtgattctcctgcctcagtctc-ccaagtagatgggattataggtgcccaccaccacacccagctaa-tttttgcatttttagtagagacagggtttcaccatgttgaccaggctggtcttgaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 810806 199 + 3010529 gagtcctgcttttgtcgcccaggctggagtgcaatggcat-gatcttggctcactgcaacctccaccttccggtttcaagtgattctcctgcctcagcctc-ccgagtagctgggattacaggcacccgccaccatgcctggctaa-tttttgta-ttttagtagagacagggtttcaccatgttgaccaggctggtcttgaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53929922 190 + 163208435 gagtcttgc-tctgtcgcccaggctggagtgcagtggcgcaaatcttggctcactgcaagctccgcctcccgggttcacgacattctcctgcctcagcctctccgagtagctgggactacaggcgcccgccaccatgcctggctaattttttatatttttagtagagacagggtttcaccgtg------------gtctcgat i nomLeu3.chr2 M 1487 C 0 s rheMac8.chr20 21396453 200 - 74971481 gagtctcgcttttctcgcccaggctggagggcaatggcgt-gatcttggctcactgcaacctctgactcccgggttcaagcgattctcctgcctcagtctc-ctaagtggctagtattataggtgcccaccaccacacctggctaa-tttttgcatttttagtagagacagggtttcaccatgttggccaggctggtctcaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109381 200 - 78541002 gagtctcgcttttgtcgcccaggctggagggcaatggcgt-gatcttggctcactgcaacctctgactcccgggttcaagcgattctcctgcctcagtctc-ctaagtggctagtattataggtgcccaccaccacacctggctaa-tttttgcatttttagtagagacagggtttcaccatgttggccaggctggtctcaaa i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20829352 200 + 43916225 gagtctcgcttttgtcgcccaggctggagggcaatggcgt-gatcttggctcactgcaacctctgactcccgggttcaagcgattctcctgcctcagtctc-ctaagtggctagtattataggtgcccaccaccacacctggctaa-tttttgcatttttagtagagacggggtttcaccatgttggccaggctggtctcaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260231 200 + 75399963 gagtctcgcttttgtcgcccaggctggagggcaatggcgt-gatcttggctcactgcaacctctgactcctgggttcaagcgattctcctgcctcattctc-ctaagtggctagtattacaggcgcccaccaccacacctggctaa-tttttgcatttttagtagagacggggtttcaccatgttggccaggctggtctcaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826792 200 - 7209941 gagtctcgcttttgtcgcccaggctggagggcaatggcgt-gatcttggctcactgcaacctctgactcccgggttcaagcgattctcctgcctcagtctc-ctaagtggctagtattataggtgcccaccaccacacctggctaa-tttttccatttttagtagagacggggtttcaccatgttggccaggctggtctcaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575298 200 + 3907144 gagtctcgcttttgtcgcccaggctggagggcaatggtgc-gatcttggctcactgcaacctccgactcctgggttcaagcaattctcctgcctcagtctc-ccaagtggctggcattataggcgtccaccaccacacctggctaa-tttttgcatttttagtagagacggggttttaccatgttggccaggctggtctcaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570647 196 - 44557958 aagtctcac-tctgtttccaaggctgtggtacagtggcat-gatcttggctcactgcaaccactatctcccaggtttaagtgattctcctgcctcagactc-ctgagtagctgggaccacaggcacacaccaccatgactggc----tttttgtatttttagtagagatggggttttcccatgttggccaggctggtctcgat i calJac3.chr20 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e macNem1.NW_012011355v1 14507242 560 + 26466322 M e saiBol1.JH378225 6378515 4207 + 6628207 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=458658.000000 s hg38.chr16_GL383557v1_alt 84886 80 + 89672 ctcctgacctcaggtgatccgtccgccttggcctcccaaagtgctgggactacaggcg-tgagtcaccatgcccggccaat s panTro5.chr16 21516374 80 - 81586097 ctcctgacctcaggtgatccgcccgccttggcctcccaaagtgctgggactacaggcg-tgagtcaccacgcccggccAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577870 80 - 90481686 ctcctgacctcaggtgatccgcccgccttggcctcccaaagtgctgggactacaggcg-tgagtcaccacgcccggccaat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811005 80 + 3010529 ctcctgacctcaggtgatccgcccgccttggcctcccaaagtgctgggactacaggcg-tgagtcaccacgctcggccAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930112 75 + 163208435 ctcctgacctc--gtgattcgcccgccttggcctcccaaagtgctgggattacaagcg-tgagccatcgcgcccggcc--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396653 81 - 74971481 ctcctgacctcaagtgatccgcacgccttggcctgccaaagtgctgggactataggcgttgagtcaccacgcttggccaat i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109581 81 - 78541002 ctcctgacctcaagtgatccgcacgccttggcctgccaaagtgctgggactataggcgttgagtcaccacgcctggccaat i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507821 78 + 26466322 ctcctgacctc--gtgatccgcccgtctcggcctcccaaagtgctgggattacaggc-ttgagccaccgcgcccggccATT i macNem1.NW_012011355v1 M 560 C 0 s cerAty1.NW_011999143v1 20829552 81 + 43916225 ctcctgacctcaagtgatccacacgccttggcctgccaaagtgctgggactataggcgttgagtcaccacgcctggccAAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260431 81 + 75399963 ctcctgacctcaagtgacccgcacgccttggcctgccaaagtgctgggactgcaggcgttgagtcaccacgcctggACAAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6826992 81 - 7209941 ctcctgacctcaagtgatccgcacgccttggcctgccaaagtgctgggactataggcgttgagtcaccacgcctggccAAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575498 80 + 3907144 ctcctgacttcaagtgatccgcacgccttggcctgccaaagtgctgggactgcaggcg-tgagtcaccatgcctggccaat i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570843 79 - 44557958 ctctggagctcaggtgat-cacctgcctcagcctcccaaagtgctgggtttataggcg-tgagccacctcagccggccAAT i calJac3.chr20 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e dasNov3.JH569970 980797 1139 + 1009443 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=100943.000000 s hg38.chr16_GL383557v1_alt 84966 18 + 89672 aattaactcttaagtata s panTro5.chr16 21516454 18 - 81586097 AATTAACTCTTAAGTATA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577950 18 - 90481686 aattaactcttaagtata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811085 16 + 3010529 AATTAACTC--AAGTATA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396734 18 - 74971481 aattaactcttaagtata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109662 18 - 78541002 aattaactcttaagtata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507899 18 + 26466322 AATTAACTCTTAAGTATA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829633 18 + 43916225 AATTAACTCTTAAGTATA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260512 18 + 75399963 AATTAACTCTTAAGTATA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827073 18 - 7209941 AATTAACTCTTAAGTATA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575578 16 + 3907144 aattaactc--aagtata i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570922 18 - 44557958 AGTTAATTATTAAGTATA i calJac3.chr20 C 0 C 0 s dasNov3.JH569970 981936 18 + 1009443 AATTAATATCTAAGTCTA i dasNov3.JH569970 I 1139 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e micMur3.chr20 54962073 1558 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2969033 1999 + 9850184 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e otoGar3.GL873566 13749630 418 + 13852661 I e nomLeu3.chr2 53930187 0 + 163208435 C a score=123615.000000 s hg38.chr16_GL383557v1_alt 84984 15 + 89672 ataattaCAACTGCT s panTro5.chr16 21516472 15 - 81586097 ATAATTACAACTGCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577968 15 - 90481686 ataattaCAACTGCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811101 15 + 3010529 ATAATTACAACTGCT i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396752 15 - 74971481 attattaCAACTGCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109680 15 - 78541002 attattaCAACTGCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507917 15 + 26466322 ATTATTACAACTGCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829651 15 + 43916225 ATTATTACAACTGCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260530 15 + 75399963 ATTATTACAACTGCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827091 15 - 7209941 ATTATTACAACTGCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575594 15 + 3907144 attattaCAACTGCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570940 15 - 44557958 ATAATTACAAGTGTT i calJac3.chr20 C 0 C 0 s micMur3.chr20 54963631 15 + 72247402 ATAATTACAACTGCT i micMur3.chr20 I 1558 C 0 s proCoq1.NW_012152729v1 2971032 15 + 9850184 ATAATTACAACTGCT i proCoq1.NW_012152729v1 I 1999 C 0 s dasNov3.JH569970 981954 15 + 1009443 ATAAATACAATTACT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e mm10.chr8 22495301 1447 - 129401213 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e saiBol1.JH378225 6378515 4207 + 6628207 I e otoGar3.GL873566 13749630 418 + 13852661 I e nomLeu3.chr2 53930187 0 + 163208435 C a score=35791.000000 s hg38.chr16_GL383557v1_alt 84999 5 + 89672 GTGGA s panTro5.chr16 21516487 5 - 81586097 GTGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577983 5 - 90481686 GTGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811116 5 + 3010529 GTGGA i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21396767 5 - 74971481 GTAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109695 5 - 78541002 GTAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507932 5 + 26466322 GTAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829666 5 + 43916225 GTAGA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260545 5 + 75399963 GTAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827106 5 - 7209941 GTAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575609 5 + 3907144 GTAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570955 5 - 44557958 GGGGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382722 5 + 6628207 gtaaa i saiBol1.JH378225 I 4207 C 0 s micMur3.chr20 54963646 5 + 72247402 TTGGA i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2971047 5 + 9850184 TTGGA i proCoq1.NW_012152729v1 C 0 C 0 s dasNov3.JH569970 981969 5 + 1009443 TTGGA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80493185 2456 + 88915250 I e mm10.chr8 22495301 1447 - 129401213 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e otoGar3.GL873566 13749630 418 + 13852661 I e nomLeu3.chr2 53930187 0 + 163208435 C a score=139302.000000 s hg38.chr16_GL383557v1_alt 85004 17 + 89672 TTAAAACTCTATTTTTA--- s panTro5.chr16 21516492 17 - 81586097 TTAAAACTCTATTTTTA--- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21577988 17 - 90481686 TTAAAACTCTATTTTTA--- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811121 17 + 3010529 TTAAAACTCTATTTTTA--- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930187 16 + 163208435 -TAAAACTCTATTTTTA--- i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396772 17 - 74971481 TTAAAACTCTATTTTCA--- i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109700 17 - 78541002 TTAAAACTCTATTTTCA--- i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507937 17 + 26466322 TTAAAACTCTATTTTCA--- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829671 17 + 43916225 TTAAAACTCTATTTTCA--- i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260550 17 + 75399963 TTAAAACTCTATTTTCA--- i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827111 17 - 7209941 TTAAAACTCTATTTTCA--- i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575614 17 + 3907144 TTAAAACTCTATTTTTA--- i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21570960 17 - 44557958 TGAAAACTCTATTTTTA--- i calJac3.chr20 C 0 I 116 s saiBol1.JH378225 6382727 9 + 6628207 taaaaaTTC----------- i saiBol1.JH378225 C 0 C 0 s micMur3.chr20 54963651 14 + 72247402 TTAAAACTCTTTTA------ i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2971052 14 + 9850184 TTAAAACGCTTTTA------ i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80495641 17 + 88915250 TCAAAACTCTATTTTAA--- i canFam3.chr5 I 2456 C 0 s dasNov3.JH569970 981974 20 + 1009443 GTAAAACTCTATTAATAGTA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I e aotNan1.NW_018500622v1 9312855 5227 - 10531588 I e cebCap1.NW_016107433v1 3358121 13277 - 5917169 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=41152.000000 s hg38.chr16_GL383557v1_alt 85021 3 + 89672 AAG s panTro5.chr16 21516509 3 - 81586097 AAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578005 3 - 90481686 AAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811138 2 + 3010529 AA- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930203 3 + 163208435 AAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396789 3 - 74971481 AAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109717 3 - 78541002 AAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507954 3 + 26466322 AAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829688 3 + 43916225 AAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260567 3 + 75399963 AAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827128 3 - 7209941 AAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575631 3 + 3907144 AAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571093 3 - 44557958 AAG i calJac3.chr20 I 116 C 0 s saiBol1.JH378225 6382736 3 + 6628207 AAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371398 3 - 5917169 AAG i cebCap1.NW_016107433v1 I 13277 C 0 s aotNan1.NW_018500622v1 9318082 3 - 10531588 aaG i aotNan1.NW_018500622v1 I 5227 C 0 s micMur3.chr20 54963665 3 + 72247402 AAG i micMur3.chr20 C 0 C 0 s proCoq1.NW_012152729v1 2971066 3 + 9850184 AAG i proCoq1.NW_012152729v1 C 0 C 0 s canFam3.chr5 80495658 3 + 88915250 AAG i canFam3.chr5 C 0 I 403 s dasNov3.JH569970 981994 3 + 1009443 AAA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=522876.000000 s hg38.chr16_GL383557v1_alt 85024 37 + 89672 GGGAATTTATCCC------AC-TCATTTCAACTTATACCACTAT s panTro5.chr16 21516512 37 - 81586097 GGGAATTTATCCC------AC-TCATTTCAACTTATACCACTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578008 37 - 90481686 GGGAATTTATCCC------AC-TCATTTCAACTTATACCACTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811140 43 + 3010529 GGGAATTTATCCCACTCATAC-TCATTTCCACTTATACCACTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930206 37 + 163208435 GGGAATTTATCCC------AC-TCATTTCAATTTATACCACTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396792 37 - 74971481 GGGAATTTATCCC------AC-TCATTTCAACTTATATCACTAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109720 37 - 78541002 CGGAATTTATCCC------AC-TCATTTCAACTTATATCACTAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507957 37 + 26466322 GGGAATTTATCCC------AC-TCATTTCAACTTATATCACTAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829691 37 + 43916225 GGGAATTTATCCC------AC-TCATTTCAACTTATATCACTAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260570 37 + 75399963 GGGAATTTATCCC------AC-TCATTTCAACTTATATCACTAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827131 38 - 7209941 GGGAATTTATCCC------ACATCATTTCAACTTATATCACTAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575634 37 + 3907144 GGGAATGTATCCC------AC-TCATTTTAACTTATATCACTAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571096 37 - 44557958 GGGAATTTATCCC------AC-TCATTTTAATTTATACCACTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382739 37 + 6628207 GGAAATTTATCCT------AC-TCATTTTAATTTATACCACTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371401 37 - 5917169 GGGAATTTATCCC------AC-TCATTTCAATTTATACCACTAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318085 37 - 10531588 GGGAATTTATCCC------AT-TCATTTTAATTTATACCACTAT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54963668 37 + 72247402 AGGAATTTCTCCC------AC-TCATTTTAACTTAGACCACTAT i micMur3.chr20 C 0 I 110 s proCoq1.NW_012152729v1 2971069 37 + 9850184 AGGAATTTCTCCC------AC-TCATTTCAACTTAGACCATTAT i proCoq1.NW_012152729v1 C 0 I 17 s canFam3.chr5 80496064 35 + 88915250 GGAAATTTCTCCC------AC-TCATTTCAAGTTATTCTTCT-- i canFam3.chr5 I 403 C 0 s dasNov3.JH569970 981997 37 + 1009443 AGGAATTTCTCCA------AC-TCATTTCAACTTACACTACCAT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=115760.000000 s hg38.chr16_GL383557v1_alt 85061 12 + 89672 TATCACTTACGT s panTro5.chr16 21516549 12 - 81586097 TATCACTTACAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578045 12 - 90481686 TATCACTTACAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811183 12 + 3010529 TATCACTTACAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930243 12 + 163208435 TATCACTTACAT i nomLeu3.chr2 C 0 I 292 s rheMac8.chr20 21396829 12 - 74971481 TATCACTTACAT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109757 12 - 78541002 TATCACTTACAT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14507994 12 + 26466322 TATCACTTACAT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829728 12 + 43916225 TATCACTTACAT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260607 12 + 75399963 TAACACTTACAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827169 12 - 7209941 TATCACTTACAT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575671 12 + 3907144 TGTCACTTACAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571133 12 - 44557958 TATCATTTATAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382776 12 + 6628207 TATCATTTATAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371438 12 - 5917169 TATCATTTATAT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318122 12 - 10531588 TATCATTTATAT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80496099 11 + 88915250 TA-CAGTTACAC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 982034 12 + 1009443 TATAGTTCTTGG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54963705 110 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971106 17 + 9850184 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=71903.000000 s hg38.chr16_GL383557v1_alt 85073 12 + 89672 GTGACAT--CTATG s panTro5.chr16 21516561 12 - 81586097 GTGACAT--CTATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578057 12 - 90481686 GTGACAT--CTATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811195 12 + 3010529 GTGACAT--CTATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930547 12 + 163208435 GTGACAT--CTATG i nomLeu3.chr2 I 292 C 0 s rheMac8.chr20 21396841 12 - 74971481 GTGACAT--CTATG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109769 12 - 78541002 GTGACAT--CTATG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508006 12 + 26466322 GTGACAT--CTATG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829740 12 + 43916225 GTGACAT--CTATG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260619 14 + 75399963 GTAACATCTATATG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827181 10 - 7209941 GTGAC----ATATG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575683 14 + 3907144 GTGACATCTATATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571145 13 - 44557958 GTGACATT-AAATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382788 13 + 6628207 GTGACATT-AAATG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371450 13 - 5917169 GTGACATT-AAATG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318134 13 - 10531588 GCGACATT-AAATG i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80496110 14 + 88915250 ATAACATCTAAATG i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 982046 12 + 1009443 --TACACTTAAATA i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54963705 110 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971106 17 + 9850184 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=428647.000000 s hg38.chr16_GL383557v1_alt 85085 33 + 89672 TTTTTCAGGGCCTTAACATACATCAAACTGTTC s panTro5.chr16 21516573 33 - 81586097 TTTTTCAGGGCCTTAACATACATCAAACTGTTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578069 33 - 90481686 TTTTTCAGGGCCTTAACATACATCAAACTGTTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811207 33 + 3010529 CTTTTCAGGGCCTTAACATACATCAAACTGTAC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930559 33 + 163208435 TTTTTCAGGACTTTAACATACATCAAACTGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396853 33 - 74971481 TTTTTCAGGGCTTCAGCATACATCAAACTGTTC i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109781 33 - 78541002 TTTTTCAGGGCTTCAGCATACATCAAACTGTTC i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508018 33 + 26466322 TTTTTCAGGGCTTCAGCATACATCAAACTGTTC i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829752 33 + 43916225 TTTTTCAGGGCTTCAGCATACATCAAACTGTTC i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260633 33 + 75399963 TTTTTCAGGGCTTCAGCATACATCAAACTGTTC i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827191 33 - 7209941 TTTTTCAGGGCTTCAGCATACATCAAACTGTTC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575697 33 + 3907144 TTTTTCAGGGCTTCAGCATACATCAAACTATTC i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571158 33 - 44557958 TTTTTCAGGGCTTTAACATACGTCAAACTGTTC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382801 33 + 6628207 TTTTTCAGGGCTTTAACATATATCAAACTAGTC i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371463 33 - 5917169 TTTTTCAGGGCTTTAACATGTATCAAACTGTTC i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318147 33 - 10531588 TTTTTCAGGGCTTTAACATACATCTAATGGTTC i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2971123 33 + 9850184 TTTTACAGGGCTTTAACATACATCAAATTGTTC i proCoq1.NW_012152729v1 I 17 C 0 s canFam3.chr5 80496124 33 + 88915250 TTTCACAGGGCTTTAATAACCATCAAATTGTTC i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 982058 33 + 1009443 TTTTATAGAACTTTAACATACATCAAATTGTTT i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54963705 110 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e otoGar3.GL873566 13749630 418 + 13852661 I a score=14972.000000 s hg38.chr16_GL383557v1_alt 85118 1 + 89672 T s panTro5.chr16 21516606 1 - 81586097 T i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578102 1 - 90481686 T i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811240 1 + 3010529 T i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930592 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396886 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109814 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508051 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829785 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260666 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827224 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575730 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571191 1 - 44557958 T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382834 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371496 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318180 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2971156 1 + 9850184 T i proCoq1.NW_012152729v1 C 0 I 154 s otoGar3.GL873566 13750048 1 + 13852661 C i otoGar3.GL873566 I 418 C 0 s canFam3.chr5 80496157 1 + 88915250 T i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 982091 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54963705 110 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I a score=240593.000000 s hg38.chr16_GL383557v1_alt 85119 24 + 89672 AAAAAAAC------CTGTGATATGGAATAG s panTro5.chr16 21516607 24 - 81586097 AAAAAAAC------CTGTGATATGGAATAG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578103 24 - 90481686 AAAAAAAC------CTGTGATATGGAATAG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811241 24 + 3010529 AAAAAAAC------CTGTGATATGGAATAG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930593 24 + 163208435 CAAAAAAC------ATGTGATATGGAATAG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396887 24 - 74971481 CAAAAAAC------CTGTGATATGGAATAG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109815 24 - 78541002 CAAAAAAC------CTGTGATATGGAATAG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508052 24 + 26466322 CAAAAAAC------CTGTGATATGGAATAG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829786 24 + 43916225 CAAAAAAC------CTGTGATATGGAATAG i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260667 24 + 75399963 CAAAAAAC------CTGTGATATGGAATAG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827225 24 - 7209941 CAAAAAAC------CTGTGATATGGAATAG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575731 24 + 3907144 CAAAAAAC------CTGTGGTATGGAATAG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571192 24 - 44557958 CAGAAAAG------CTGTGAAACGGAATAG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382835 24 + 6628207 CAGAAAAG------CTGTGAAACAGAATAG i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371497 24 - 5917169 CAGAAAAG------CTGTGAAATGGAATAG i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318181 24 - 10531588 CAGAAAAG------CTGTGAAATGGAATAG i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13750049 20 + 13852661 -AAAAAAA------GTG-GGCAT-GAATA- i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80496160 24 + 88915250 TAGGAAAC------CTGTTCAGTGGAACAG i canFam3.chr5 I 2 I 32 s dasNov3.JH569970 982092 30 + 1009443 CATGAAACACACAGCAATGAAATGGGACAG i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54963705 110 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971157 154 + 9850184 I a score=1150914.000000 s hg38.chr16_GL383557v1_alt 85143 95 + 89672 -------------------------------------GAACACTACACTAGAATATGGATGTCGGCATGTGGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGCTGGTCAACAAAT---AAA s panTro5.chr16 21516631 95 - 81586097 -------------------------------------GAACACTACACTAGAATATGGATGTCGGCATGTGGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGCTGGTCAACAAAT---AAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578127 95 - 90481686 -------------------------------------GAACACTACACTAGAATATGGATGTCGGCATGTGGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGCTGGTCAACAAAT---AAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811265 95 + 3010529 -------------------------------------GAACACTACACTAGAATATGGATGTCGGCACGTGGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGCTGGTCAACAAAC---AAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930617 95 + 163208435 -------------------------------------GAACACTACGCTAGAATATGGATGTTGGCACGTGGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGCTAGTCAACAAAT---AAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21396911 91 - 74971481 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGATAGACCATCATTCTCAAACTAAGGAG-ATAAAG----AAGGAGGTATTCAACAAAT---AAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109839 91 - 78541002 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGGTAGCACATCATTCTCAAACTAAGGAG-ATAAAG----AAGGAGGTTTTCAACAAAT---AAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508076 91 + 26466322 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTCGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAG----AAGGAGGTATTCAACAAAT---AAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829810 91 + 43916225 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAG----AAGGAGGTATTCAACAAAT---AAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260691 95 + 75399963 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGAATAGCACATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGGTATTCAACAAAT---AAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827249 91 - 7209941 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGATAGCACATCATTCTCAAACTAAGGAG-ATAAAG----AAGGAGGTATTCAACAAAT---AAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575755 95 + 3907144 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGATAGCTCATCATTCTCAAACTAAGGAG-ATAAAGAATAAAGGAGGTATTCAACAAAT---AAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571216 95 - 44557958 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAAGATAGCACATAATTCTCAAACTAAGGAG-GTAAAGAACAAAGGATCTAGTCAACAAAT---AAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382859 95 + 6628207 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCATGTAGGATAGCACATAATTCTCAAACGAAGGAG-GTAAAGAACAAAGGATCTAGTCAACAAAT---AAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371521 95 - 5917169 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGATAGCACGTAATTCTCAAACGAAGGAG-GTAAAGAACAAAGAATCTAGTCAACAAAT---AAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318205 95 - 10531588 -------------------------------------GAACACTACACTAGAATATGGATGTCAGCACGTAGGATAGCACATAATTCTCAAACTAAGGAG-GTAGAGAACAAAGGATCTAGTCAACAAAT---AAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54963815 95 + 72247402 -------------------------------------GAACTCTATACTAGAAAATGGATGTCCACACTTAGGATGGTACATAATTCTCAAACTATGTAG-GTAAAGAATAAAAGATCTAGTTAACAAAT---CTC i micMur3.chr20 I 110 I 3 s otoGar3.GL873566 13750069 89 + 13852661 --------------------------------------AACTCAACACTAGAACATGAATGCC--CACTTAGGATAG--CCTGATTCTCAAACTAAGCAG-CAATAGAA-AAAGGATCCAGTTAACAAAT---CTC i otoGar3.GL873566 C 0 I 3 s canFam3.chr5 80496216 99 + 88915250 -------------------------------------GATCTCTACACTAGAAATTGCATGTCCACACTTAAGATAGCAAACAAGTCTCAAACTAAGAAACACAAAGAATAAAGGATCTAGTCAGCAAATCTCAAA i canFam3.chr5 I 32 C 0 s dasNov3.JH569970 982122 132 + 1009443 GAACATTTTATAGGCTAGACAAAGCAGGCATATGAGTGAATTCTACACTAGAAGTTGGATGTCCACACTTAGGATAGCATATAATTCCCAA---AACTAA-GTAAAGAATAAATGTTCTTATCAACAAATCTCAAA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971157 154 + 9850184 I a score=703914.000000 s hg38.chr16_GL383557v1_alt 85238 42 + 89672 GTCACTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT s panTro5.chr16 21516726 42 - 81586097 GTCACTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578222 42 - 90481686 GTCACTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811360 42 + 3010529 GTCACTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930712 42 + 163208435 GTCACTTTCCATGTCTCAATGCTAAAATACTCAAAGGTTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397002 42 - 74971481 GTCACTTTCCATGTCTCACCGCTAAAATACTCAAAGGTTTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109930 42 - 78541002 GTCACTTTCCATGTCTCACCGCTAAAATACTCAAAGGTTTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508167 42 + 26466322 GTCACTTTCCATGTCTCACCGCTAAAATACTCAAAGGTTTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829901 42 + 43916225 GACACTTTCCATGTCTCACCGCTAAAATACTCAAAGGTTTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260786 42 + 75399963 GTCACTTTCCACGTCTCACCGCTAAAATACTCAAAGGTTTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827340 42 - 7209941 GTCACTTTCCATGTCTCACCGCTAAAATACTCAAAGGTTTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575850 42 + 3907144 GTCACTTTCCATGTCTCACCACTAAAATACTCAAAGGTTTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571311 42 - 44557958 ATCACGTTCCATGTCTCACTACTAAAATACTCAAAGGTTTCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382954 42 + 6628207 ATCATTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371616 42 - 5917169 ATTACTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318300 42 - 10531588 ATCACTTTCCATGTCTCACTGCTAAAATACTCAAAGGTTTCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54963913 42 + 72247402 ACCACTTTCTGTGGCTCACTGCTAAAATACCCAAAGGTTTCT i micMur3.chr20 I 3 C 0 s proCoq1.NW_012152729v1 2971311 42 + 9850184 GTCACTTTTCATGGCTCACTGCTAAAATACTCAAAGGTTTCT i proCoq1.NW_012152729v1 I 154 C 0 s otoGar3.GL873566 13750161 42 + 13852661 GTCACTTTCCATGCTTCACTGTTAAAATACTCAAAGATTTCT i otoGar3.GL873566 I 3 C 0 s canFam3.chr5 80496315 42 + 88915250 GTCACTTCCTATGCTCCAATGCTAAAATACCCAAAGGATTCt i canFam3.chr5 C 0 I 1389 s dasNov3.JH569970 982254 42 + 1009443 GTCACTTTGCATGTCTCATTAATGAAATACCCAGAAATTTCT i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I a score=177006.000000 s hg38.chr16_GL383557v1_alt 85280 13 + 89672 GAATGAGAATTCA s panTro5.chr16 21516768 13 - 81586097 GAATGAGAATTCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578264 13 - 90481686 GAATGAGAATTCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811402 13 + 3010529 GAATGAGAATTCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930754 13 + 163208435 GAATGAGAATTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397044 13 - 74971481 GAATGAGAATTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109972 13 - 78541002 GAATGAGAATTCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508209 13 + 26466322 GAATGAGAATTCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829943 13 + 43916225 GAATGAGAATTCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260828 13 + 75399963 GAATGAGAATTCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827382 13 - 7209941 GAATGAGAATTCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575892 13 + 3907144 GAATGAGAATTCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571353 13 - 44557958 AAATGAGAATTCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6382996 13 + 6628207 AAATGAGAATTCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371658 13 - 5917169 AAACGAGAATGCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318342 13 - 10531588 AACTGAGAATTCA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54963955 13 + 72247402 GAATTAGAATTCA i micMur3.chr20 C 0 I 237 s proCoq1.NW_012152729v1 2971353 13 + 9850184 GAATTAGAATTCA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13750203 13 + 13852661 GAATTAGAATTCA i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 982296 11 + 1009443 GAATTAGAACA-- i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e mm10.chr8 22495301 1447 - 129401213 I a score=7111.000000 s hg38.chr16_GL383557v1_alt 85293 1 + 89672 C s panTro5.chr16 21516781 1 - 81586097 C i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578277 1 - 90481686 C i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811415 1 + 3010529 C i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930767 1 + 163208435 T i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397057 1 - 74971481 T i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109985 1 - 78541002 T i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508222 1 + 26466322 T i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829956 1 + 43916225 T i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260841 1 + 75399963 T i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827395 1 - 7209941 T i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575905 1 + 3907144 T i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571366 1 - 44557958 T i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383009 1 + 6628207 T i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371671 1 - 5917169 T i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318355 1 - 10531588 T i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2971366 1 + 9850184 C i proCoq1.NW_012152729v1 C 0 I 160 s otoGar3.GL873566 13750216 1 + 13852661 T i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 982307 1 + 1009443 T i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I a score=26996.000000 s hg38.chr16_GL383557v1_alt 85294 2 + 89672 GT s panTro5.chr16 21516782 2 - 81586097 GT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578278 2 - 90481686 GT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811416 2 + 3010529 GT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930768 2 + 163208435 GT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397058 2 - 74971481 GT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109986 2 - 78541002 GT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508223 2 + 26466322 GT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829957 2 + 43916225 GT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260842 2 + 75399963 GT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827396 2 - 7209941 GT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575906 2 + 3907144 GT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571367 2 - 44557958 GT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383010 2 + 6628207 GT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371672 2 - 5917169 GT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318356 2 - 10531588 GT i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13750217 2 + 13852661 AT i otoGar3.GL873566 C 0 T 573 s dasNov3.JH569970 982308 2 + 1009443 GT i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I a score=60424.000000 s hg38.chr16_GL383557v1_alt 85296 5 + 89672 TACCA s panTro5.chr16 21516784 5 - 81586097 TACCA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578280 5 - 90481686 TACCA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811418 5 + 3010529 TACCA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930770 5 + 163208435 TACCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397060 5 - 74971481 TACCA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109988 5 - 78541002 TACCA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508225 5 + 26466322 TACCA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829959 5 + 43916225 TACCA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260844 5 + 75399963 TACCA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827398 5 - 7209941 TACCA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575908 5 + 3907144 TACCA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571369 5 - 44557958 TACCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383012 5 + 6628207 CACCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371674 5 - 5917169 TACCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318358 5 - 10531588 TACCG i aotNan1.NW_018500622v1 C 0 C 0 s dasNov3.JH569970 982310 5 + 1009443 TACCA i dasNov3.JH569970 C 0 I 151 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e otoGar3.GL873566 13750219 573 + 13852661 T a score=536876.000000 s hg38.chr16_GL383557v1_alt 85301 62 + 89672 TTCCTCTACAATATTTACGTCATAGAAAATAATAggctgggtgtggtggctcac-----------------------------gcctgcaa s panTro5.chr16 21516789 62 - 81586097 TTCCTCTACAATATTTATGTCATAGAAAATAATAggctgggtgtggtggctcac-----------------------------gcctgcaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578285 62 - 90481686 TTCCTCTACAATATTTATGTCATAGAAAATAATAGGCTGGGTGTGGTGGCTCAC-----------------------------GCCTGCAA i panPan2.chr16 C 0 I 27 s gorGor5.CYUI01000018v1 811423 62 + 3010529 TTCCTCTACAATATTTATGTCATAGAAAATAATAggctgggtgtggtggctcac-----------------------------gcctgtaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930775 62 + 163208435 TTCTTCTATAATATTTATGTCATAGAAAATAATAggctggatgtggtggctcac-----------------------------gcctgtaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397065 61 - 74971481 TTCTTCTACAATA-TTATGTCATAGAAAATAATAggcggggtgtggtggctcat-----------------------------acccgtaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21109993 61 - 78541002 TTCTTCTACAATA-TTATGTCATAGAAAATAATAggcggggtgtggtggctcat-----------------------------acccgtaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508230 61 + 26466322 TTCTTCTACAATA-TTATGTCATAGAAAATAATAggcggggtgtggtggctcat-----------------------------acccgtaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20829964 61 + 43916225 TACTTCTACAATA-TTATGTCATAGAAAATAATAggcggggtgtggtggctcat-----------------------------acccgtaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58260849 60 + 75399963 TTCTTCTACAATA-TTATGTCATGGAAAATAATAGGc-gggtgtggtggctcat-----------------------------acccgtaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827403 61 - 7209941 TTCTTCTACAATA-TTATGTCATAGAAAATAATAggcggggtgtggtggctcac-----------------------------acccgtaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 575913 90 + 3907144 TTCTTCTACAGTA-TTATGTCATACAAAATAATAggcggggtgtggtggctcatactcgtaatctcagcactttgggaggccaacccataa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571374 62 - 44557958 GTCTTGTACAATATTTACGTCATAGAAAATAACAggctgagtgtgatggctcac-----------------------------acctgtaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383017 62 + 6628207 GTCTTGTACAATATTTACGTCATAGAAAATAATAggctgagtgtgatggctcac-----------------------------acctgtaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371679 62 - 5917169 GTCTTGTACAATATTTACGTCATAGAAAATAATAggctgagtgtgatggctcac-----------------------------acctgtaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318363 62 - 10531588 GTCTTGTACAATATTTACatcatagaaaataataggctgagtgtgatggctcac-----------------------------acctgtaa i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e otoGar3.GL873566 13750219 573 + 13852661 T a score=1124755.000000 s hg38.chr16_GL383557v1_alt 85363 156 + 89672 tctcagcactttgggaggccgaggcaggcagatcacttgaggtcaggagtc--agaccaccctggccatcatggtgaaa-gcct----------aaacatataaaaa-ttagctgggcacagaggcgggcgcctgtaatctcacc-tacttcgg-aggctgaggcaggagaa s panTro5.chr16 21516851 156 - 81586097 tctcagcactttgggaggccgaggcaggcagatcacttgaggtcaggagtc--agaccaccctggccatcatggtgaaa-gcct----------aaacatataaaaa-ttagctgggcacaggggcgggcgcctgtaatctcacc-tacttcgg-aggctgaggcaggagaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811485 156 + 3010529 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtc--agaccaccctggccatcatggtgaaa-gcct----------aaacatataaaaa-ttagctgggcacaggggcgggcgcctgtaatctcacc-tacttcag-aggctgaggcaggagaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930837 156 + 163208435 tctcagcactttgggaggccgaggcaggcagatcacttgaggtcaggagtc--agaccaccctggccatcatggtgaaa-gcct----------aaacatataaaaa-ttagctgggcacggtggcgggcacctgtaatctcacc-tactccgg-aggctgaggcaggagaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397126 155 - 74971481 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtctgagaccagcttggccatcatggtgaaa-ccat----------aaacatataaaaa-ttagctgggcacagtggcaggcacctgtaatcccccc-tact---g-aggctgaggcaggagaa i rheMac8.chr20 C 0 I 3 s macFas5.chr20 21110054 155 - 78541002 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtctgagactagcttggccatcatggtgaaa-ccat----------aaacatacaaaaa-ttagctgggcacagtggcgggcacctgtaatcccccc-tact---t-aggctgaggcaggagaa i macFas5.chr20 C 0 I 3 s macNem1.NW_012011355v1 14508291 155 + 26466322 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtctgagaccagcttggccatcatggtgaaa-ccat----------aaacatataaaaa-ttagctgggcacagtggcgggcacctgtaatcccccc-tact---g-aggctgaggcaggagaa i macNem1.NW_012011355v1 C 0 I 3 s cerAty1.NW_011999143v1 20830025 158 + 43916225 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtctgacaccagcttggccatcatggtgaaacccat----------aaacagttaaaca-atagctgggcacagtggcaggcacctgtaatccccctacgct---gaaggctgaggcaggagaa i cerAty1.NW_011999143v1 C 0 I 455 s chlSab2.chr5 58260909 136 + 75399963 tctcagcactttgggaggccaaggc----------------------agtctgagaccagcttggccatcatggtgaaa-ccat----------aaacatataaaaa-ttagctgggcacagtggcgggcgcctgtaatcccccc-tactctgg-aggctgaggcagaagaa i chlSab2.chr5 C 0 I 3 s manLeu1.NW_012101698v1 6827464 159 - 7209941 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtctgagaccagcttggccatcatggtgaaa-ccat----------aaacatataaaaatttagctgggcacagtggtgggcacctgtaatcccccc-tactctgg-aggctgaggcaggagaa i manLeu1.NW_012101698v1 C 0 I 3 s colAng1.NW_012123265v1 576003 158 + 3907144 tctcagcactttgggaggccaaggcaggcagatcacttgaggtcaggagtctgagaccagcttggccatcatggtgaaa-ccat----------aaacatataaaaa-ttggctaggcacagtggcgggcgcctgtaatcccccc-tactctgg-aggctgaggcaggagaa i colAng1.NW_012123265v1 C 0 I 3 s calJac3.chr20 21571436 167 - 44557958 tctcagcactttggaaggctgaggtgggtggatcacttgaagtcaggagtctgagaccagcctggtcatcacagtgaaa-ccccatttctacaaaaaaacataaaaa-ttaaccaggtgtggtggttggtgcctgtaatcccacc-tactctgg-aggctaaggcagcaga- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383079 167 + 6628207 tctcagcactttgggaggctgagctgggtggatcacttgaggtcgggagtctgagaccagcctggttatcacggtgaaa-ccccatttctataaaaaaatataaaaa-ttaaccagttttggtggtgggtacctgtaatccctcc-tactctgg-aggctgaggcagcaga- i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371741 165 - 5917169 tctcagcactttgggaggctgagttgggtggatcacttgaggtcaggag--ggagaccagcctggtcatcacggtgaaa-ccccatttctacaaaaaaatataaaaa-ttaaacaggtgtggtggcgggtgcctgtaatcccacc-tactatgg-aagctgaggcagcaga- i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318425 167 - 10531588 tctcagcactttgggaggctgaggtgggtggatcacttgaggtcaggagtctgagaccagcctggtcatcatggtgaaa-tcccatctctacaaaaaaatataaaaa-ttaaccaggtgtggtggcaggtgcctgtaatcccacc-tactccgg-aggctaaggtagcaga- i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e panPan2.chr16 21578347 27 - 90481686 I e otoGar3.GL873566 13750219 573 + 13852661 T a score=432451.000000 s hg38.chr16_GL383557v1_alt 85519 60 + 89672 ----attgct----ccctggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctg s panTro5.chr16 21517007 60 - 81586097 ----attgct----ccctggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctg i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811641 60 + 3010529 ----attgct----ccctggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53930993 64 + 163208435 ----attgcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397284 60 - 74971481 ----cttgaa----cccaggaggcagaggttgcggtgaaccgagattgtgccactgcactccagcctg i rheMac8.chr20 I 3 C 0 s macFas5.chr20 21110212 60 - 78541002 ----cttgaa----cccaggaggcagaggttgcggtgaaccgagattgtgccactgcactccagcctg i macFas5.chr20 I 3 C 0 s macNem1.NW_012011355v1 14508449 60 + 26466322 ----cttgaa----cccaggaggcagaggttgcggtgaaccgagattgtgccactgcactccagcctg i macNem1.NW_012011355v1 I 3 C 0 s chlSab2.chr5 58261048 60 + 75399963 ----cttgaa----cccaggaggcagaggttgcagtgaaccgagattgtgccactgcactccagcctg i chlSab2.chr5 I 3 C 0 s manLeu1.NW_012101698v1 6827626 60 - 7209941 ----cttgaa----cccaggaggcagaggttgcggtgaaccgagattgtgctactgcactccagcctg i manLeu1.NW_012101698v1 I 3 C 0 s colAng1.NW_012123265v1 576164 60 + 3907144 ----cttgaa----cccaggaggcagaggttgcagtgaaccaagattgtgccactgcactccagcctg i colAng1.NW_012123265v1 I 3 C 0 s calJac3.chr20 21571603 64 - 44557958 attgcttgaa----cccaggaggcagaagtttcagtgagttgagatcatgccactgcactccagcctg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383246 64 + 6628207 attgtttgaa----cccaggaggcagaagtttcagtgagctgagatcatgccactgcattccagcctg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371906 64 - 5917169 attgcttgaa----cccaggaggcagaagtttcagtgagctgagatcatgccactgcactccagcctg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318592 64 - 10531588 attgcttgaa----cccaggaggcagaagtttcagtgagctgagatcatgccactgcactccagcctg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e panPan2.chr16 21578347 27 - 90481686 I e cerAty1.NW_011999143v1 20830183 455 + 43916225 I e otoGar3.GL873566 13750219 573 + 13852661 T a score=1340727.000000 s hg38.chr16_GL383557v1_alt 85579 219 + 89672 ggtgacagagctagactccgtctcaaaaaaat-aaaaaaa-aaaagagagagaaaaTAggccaggcacagtggct-cacacctgtaatcccagca---ctttgggaggccgaggtg---ggtggat-cacctgaggtcaggagttcgagactagcctgcccaacatggtgaaac-cccatctctactaaaaatataaaaattagctgggtgtggtgacaggggcctgtaa s panTro5.chr16 21517067 209 - 81586097 ggtgacagagctagactccgtctc-----------aaaaa-aagagagagagaaaaTAggccagacacagtggct-cacacctgtaatcccagca---ctttgggaggccgaggtg---ggtggat-cacctgaggtcaggagttcgagactagcctgcccaacatggtgaaac-cccatctctactaaaaatataaaaattagctgggtgtggtgacaggggcctgtaa i panTro5.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 811701 220 + 3010529 ggtgacagagctagactccatctcaaaaaaagaaaaaaaa-aaaaaagagagaaaATAggccaggcacagtggct-cacacctgtaatcccagca---ctttgggaggccgaggtg---ggtggat-cacctgaggtcaggggttcgagactagcctgcccaacatggtgaaac-cccatctctactaaaaatataaaaattagctggttgtggtgacaggggcctgtaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931057 215 + 163208435 ggtgacagagctagactc-----caaaaaaaaaaaaaaaa-aaaaaaaagagaaaATAggccaggcacagtgact-cacacctgtaatcccagca---ctttgggaggccaaggtg---ggtggat-cacttgaggtcaggagttcgagactagcctggccaacatggtgaaac-cccatctctaccaaaaacataaaaattagctgggtgtggtgacaggggcctgtaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397344 209 - 74971481 ggcgacagagctagactctgtct-----------aaaaaa-aaaagagagagaaaaTAggctgggcacagtggct-cacgcctgtaatcccaaca---ctttgggaggccaaggtg---ggtggat-cacctgaggtcaggagtttgagactagcctggccaacatggtaaaac-cccgtctctactaaaaatataaaaattagctaggtgtggtggcgggggcctgtaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110272 209 - 78541002 ggcgacagagctagactctgtct-----------aaaaaa-aaaagagagagaaaaTAggctgggcacagtggct-cacgcctgtaatcccaaca---ctttgggaggccaaggtg---ggtggat-cacctgaggtcaggagtttgagactagcctggccaacatggtaaaac-cccgtctccactaaaaatataaaaattagctgggtgtggtggcgggggcctgtaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508509 209 + 26466322 ggcgacagagctagactctgtct-----------aaaaaa-aaaagagagagaaaaTAggctgggcacagtggct-cacgcctgtaatcccaaca---ctttgggaggccaaggtg---ggtggat-cacctgaggtcaggagtttgagactagcctggccaacatggtaaaac-cccgtctctactaaaaatataaaaattagctgggtgtggtggcgggggcctgtaa i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58261108 210 + 75399963 ggcgacagagctagactctgtct----------aaaaaaa-aaaagagagagaaaaTAggctgggcacagtggct-cacgcctgtaatcccaaca---ctttgggaggccaaggtg---ggtggat-cacctgacgtcaggagtttgagactagcctggccaacatggtaaaac-cccgtctctactaaaaatataaaaattagctgggtgtggtggcgggggcctgtaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827686 209 - 7209941 ggcgacagagctagactctgtct-----------aaaaaa-aaaagagagagaaaaTAggctgggcacagtggct-catgcctgtaatcccaaca---ctttgggaggccaaggtg---ggtcgat-cacctgaggtcaggagtttgagactagcctggccaacatggtaaaac-cccgtctctactaaaaatacaaaaattagctgggtgtggtggcgggggcctgtaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576224 208 + 3907144 ggcgacagagttaga--ctgtct-----------aaaaaataaaagagagagaaaaTAggccgggcacagtggct-cacgcctataatcccaaca---ttttgggaggccaaggtg---ggtggat-cacctgaggtcaggagtttgaaattagcctggccaacatggtaaaac-cccgtctctactaaaaatataaaaattagctgggtgtggtggcgggggcctgtaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571667 199 - 44557958 ggcgagagagcaagactctgtct-----------caaaga-------------aaaTAggccgagcaaggtggct-catgcctatactcccagcagcaatttgggaggcagaggc----agtagat-cacatgaggtcaggagttccagaatagcctggccaacatggtgaaac-ccagtctctactaaaaatacaaaaaatagccgggtgtgatggtgggtgcctgtaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383310 199 + 6628207 ggcgacagagcaagactctgtct-----------caaaga-------------aaaTAggccaggcaaggtggct-catgtctataatcccagcaaaggtttgggaggcagaggc----agtggat-cacatgaggtcaggagttccagaatagcctggccaacatggtgaaac-caagtctctactaaaaatacaaaaaatagccgggtgtgatgctgggtgcctgtaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3371970 199 - 5917169 gctgacagagcaagactctgtct-----------caaaga-------------aaaTAggccaggcaaggtggct-catgcctataatcccagcagcagtttgggaggcagaggc----agtggat-cacatgaggtcaggagttccagaatagcctggccaacatggtgaaac-caagtctctactaaaaatacaaaaaatagccaggtatgatggtgggtgcctgtaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9318656 197 - 10531588 gacgaaagagcaagactccatct-----------caaaga-------------aaaTAggccgggcaaggtggct-catgcct-taatcccagcagcagtttgggaggcagaggc----agtggat-cacatgaggtcaggagttgcagaatagcctggccaacatggtgaaac-ccagtctctactaaaaatac-aaaaacagctgggtgtgatggtgggtgcctgtaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13749646 211 + 13852661 ggtggcaggttcaaacccagctc-tggtccaaaaaaaata-aaaaataaaaaaaaataaaaaaaaaaataaggctccgtgcctatagatcaagca------------gctaaggtgccagccacatacaccagagctggcaggttcaaatccaacc---ctggcctgccaaaacaacaatgacaaccgcaacta--aaaaatacccaggtgttgtggtgggcgcctgtag i otoGar3.GL873566 T 573 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e panPan2.chr16 21578347 27 - 90481686 I e cerAty1.NW_011999143v1 20830183 455 + 43916225 I a score=944723.000000 s hg38.chr16_GL383557v1_alt 85798 105 + 89672 tccgagctactggggaggctgaggcagaagaatcgcttgaacctgggaggcagaggttgcaatgagcctagatcgcgccattgcactccagcctgggcgacaaga s panTro5.chr16 21517276 105 - 81586097 tccgagctactggggaggctgaggcagaagaatcgcttgaacctgggaggcagaggttgcaatgagcctagatcgcgccattgcactccagcctgggcgacaaga i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578374 105 - 90481686 tccgagctactggggaggctgaggcagaagaatcgcttgaacctgggaggcagaggttgcaatgagcctagatcgcgccattgcactccagcctgggcgacaaga i panPan2.chr16 I 27 C 0 s gorGor5.CYUI01000018v1 811921 105 + 3010529 tccgagctactggggaggctgaggcagaagaattgcttgaacctgggaggcagaggttgcagtgagcctagatcgcgccactgcactacagcctgggcgacaaga i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931272 105 + 163208435 tccgagctactggggaggctgaggcagaagaatcgcttgaacctgggaggcagaggttgcaatgagcctagatcgcaccattgcactccagcctgggtgacaaga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397553 105 - 74971481 tcccagctactggggaggctgaggcaggaaaatagcttgaacctgggaggcagaggttgcaatgagcctagatcacgccattgcactccagcctgggcgacaaga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110481 105 - 78541002 tcccagctactggggaggctgaggcaggaaaatagcttgaacctgggaggcagaggttgcaatgagcctagatcacgccattgcactccagcctgggcgacaaga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508718 73 + 26466322 tcccagctactggggaggct--------------------------------gaggttgcaatgagcctagatcacgccattgcactccagcctgggcgacaaga i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58261318 105 + 75399963 tcccagctactggggaggctgaggcaggaaaatagcttgaacctgggaggcagaggttgcaatgagcctagatcacgccattgcactccagcctgggcgacaaga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6827895 105 - 7209941 tcccagctactggggaggctgaggcaggaaaatagcttgaacctgggaggcagaggttgcaatgagcctagatcacaccattgcactccagcctgggcgacaaga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576432 105 + 3907144 tcccagctagtggggaagctgaggcaggaaaatagcttgaacctgggaggcagaggttgcaatgaccctagatcacgccattgcactccagcctgggcgacaaga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571866 105 - 44557958 tcccagctactagaaaggctgaggcaggagaatcacttgaacccaggaggcagaggttgccgtgagcctagatcacaccattgcactccagcctgggagacaaga i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383509 105 + 6628207 ttccagctattggaaaggctgaagcaggagaatcacttgaacccaggaggcagaggttgcagtgagcctagatcgcaccattgcactccagcctgggtgacaaga i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3372169 105 - 5917169 tcccagctactggaaaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagcctagatcgcaccactgcactccagcctgggtgacaaga i cebCap1.NW_016107433v1 C 0 I 698 s aotNan1.NW_018500622v1 9318853 105 - 10531588 tcccagctactggaaaggccgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagcctagatcgcaccattgcactccaacctgggtgacaaga i aotNan1.NW_018500622v1 C 0 I 425 s otoGar3.GL873566 13749857 97 + 13852661 tcccagctacttgggaggctgaggcaacagaattgcttaagcccaggagttggaggttgctgtgagctgtgat---gccacagcactttacccaggacaa----- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e cerAty1.NW_011999143v1 20830183 455 + 43916225 I a score=30346.000000 s hg38.chr16_GL383557v1_alt 85903 6 + 89672 atgaaa s panTro5.chr16 21517381 6 - 81586097 gtgaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578479 6 - 90481686 gtgaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812026 6 + 3010529 gtgaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931377 6 + 163208435 gtgaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397658 6 - 74971481 gggaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110586 6 - 78541002 gggaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508791 6 + 26466322 gggaaa i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58261423 6 + 75399963 gggaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828000 6 - 7209941 gggaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576537 6 + 3907144 gggaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571971 6 - 44557958 gcaaaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383614 6 + 6628207 gcaaag i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13749954 4 + 13852661 --gaga i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e cerAty1.NW_011999143v1 20830183 455 + 43916225 I a score=226145.000000 s hg38.chr16_GL383557v1_alt 85909 45 + 89672 ctccatctc-----aaaaaaag-aaaaaaaaaga--aCTACTACTAAATAAGA s panTro5.chr16 21517387 45 - 81586097 ctccgtctc-----aaaaaaag-aaaaaaaaaga--aCTACTACTAAATAAGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578485 45 - 90481686 ctccgtctc-----aaaaaaag-aaaaaaaaaga--aCTACTACTAAATAAGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812032 46 + 3010529 ttccgtctc-----aaaaaaagaaaaaaaaaaga--aCTACTACTAAATAAGA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931383 44 + 163208435 ctccgtctc-----aaaaaaa--aaaaaaaaaga--aCTACTACTAAATAAGA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397664 50 - 74971481 ctccgtctc--aaaaaaaaaaa-aaaagaaaagaaTACTACTACTAAATAAGA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110592 50 - 78541002 ctccgtctc--aaaaaaaaaaa-aaaagaaaagaaTACTACTACTAAATAAGA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508797 52 + 26466322 ctctgtctcaaaaaaaaaaaaa-aaaagaaaagaaTACTACTACTAAATAAGA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20830638 47 + 43916225 ctccgtctc-----gaaaaaaa-aaaagaaaagaaTACTACTACTAAATAAGA i cerAty1.NW_011999143v1 I 455 C 0 s chlSab2.chr5 58261429 50 + 75399963 ctccgtctc--aaaaaaaaaaa-aaaagaaaagaaTACTACTACTAAATAAGA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828006 49 - 7209941 ctccatctc---aaaaaaaaaa-aaaagaaaaTACTACTACTACTAAATAAGA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576543 47 + 3907144 ctccgcccc-----ccaaaaaa-aaaagaaaagaaTACTACTACTAAATAAGA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21571977 40 - 44557958 ctctgcct-----------cta-aataaaTAGCGATAATAATACTAAGTTAG- i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383620 44 + 6628207 ttctgtcta-------gaaata-aacaaaCAGCAATAATAATACTAAGTCAA- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13749958 46 + 13852661 ctctgtctc-----aaaaaaaa-taaaaaataaaataa-ataaataaataaaa i otoGar3.GL873566 C 0 I 290 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I a score=869055.000000 s hg38.chr16_GL383557v1_alt 85954 121 + 89672 CATTTTggccaggtgccgtggttcctgcctataatcccagcac-tttgggaggctgagatgggaggatcccccagcccaggaatttaagaccaccttgggtaatatagggagaccccatctc s panTro5.chr16 21517432 121 - 81586097 CATTTTggccaggtgccgtggttcctgcctataatcccagcac-tttgggaggctgagatgggaggatcccccagcccaggaatttaagaccaccttgggcaatatagggagaccccatctc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578530 121 - 90481686 CATTTTggccaggtgccgtggttcctgcctataatcccagcac-tttgggaggctgagatgggaggatcccccagcccaggaatttaagaccaccttgggcaatatagggagaccccatctc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812078 122 + 3010529 CATTTTggccaggtgccgtggttcctgcctataatcccagcacttttgggaggctgagatgggaggatcccccagcccaggaatttaagaccaccttgggcaacgtagggagaccccatctc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931427 121 + 163208435 CATTTTggccaggtgccgtggttcctgcctataatcccagcac-tttgggaggctgagatgggaggatcccccagcccaggaatttaagaccaccttgggcaacatagggagaccccatctc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397714 121 - 74971481 CATTTTggctaggtgccgtggttcctgcctataatcctagcac-tttgggaggctgagatgggaggatcttccagcccaggaatttaagaccaccttgggcaacacagggagaccccatctc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110642 121 - 78541002 CATTTTggccaggtgccgtggttcctgcctataatcctagcac-tttgggaggctgagatggaaggatcttccagcccaggaatttaagaccaccttgggcaacacagggagaccccatctc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508849 121 + 26466322 CATTTTggccaggtgccgtggttcctgcctataatcctagcac-tttgggaggctgagatgggaggatcttccagcccaggaatttaagaccaccttgggcaacacagggagaccccatctc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20830685 121 + 43916225 CATTTTggccaggtgccgtggttcctgcctatagtcctagcac-tttgggaggctgagatgggaggatcttccagctcaggaatttaagaccaccttgggcaacacagggagaccccatctc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58261479 121 + 75399963 CATTTTggccaggtgccgtggttcctgcctataatcccagcac-tttgggaggctgagatgggaggatcttccagcctaggaatttaagaccaccttgggcaacacagggagactccatctc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828055 121 - 7209941 CATTTTggccaggtgccgtggttcctgcctataaccctagcac-tttgggaggctgagatgggaggatcttccagcccaggaatttaagaccaccttgggcaacacagggagaccccatctc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576590 120 + 3907144 CA-TTTggccaggtgctgtggttcctgcctataatcccagcac-tttgggaggctgagatgggaggatctcccagcccaggaatttaagaccaccttgggcaacacagggagaccccatctc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572017 113 - 44557958 ------ggccaggtgtggtcgctcacgcctgtaatcccagcac-tttgggaggctgagacgggcggatc-acaaggtcaggagatcgagaccatactgttcaacatggtgaaa-cccatctc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6383664 114 + 6628207 ------ggccaggtgtggtcgcccacgcctgtaatcccagcac-tttgggaggctgagacgggcggatc-acgaggtcaggagatcaagaccatcctggtcaacatggtgaaaccccatctc i saiBol1.JH378225 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e otoGar3.GL873566 13750004 290 + 13852661 I a score=15649.000000 s hg38.chr16_GL383557v1_alt 86075 4 + 89672 ta-TT s panTro5.chr16 21517553 4 - 81586097 ta-TT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578651 4 - 90481686 ta-TT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812200 5 + 3010529 taTTT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931548 5 + 163208435 taTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397835 4 - 74971481 ta-TT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110763 4 - 78541002 ta-TT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508970 4 + 26466322 ta-TT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20830806 4 + 43916225 ta-TT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58261600 4 + 75399963 ta-TT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828176 4 - 7209941 ta-TT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576710 4 + 3907144 ta-TT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572130 4 - 44557958 ta-ct i calJac3.chr20 C 0 I 513 s saiBol1.JH378225 6383778 2 + 6628207 ta--- i saiBol1.JH378225 C 0 C 0 s otoGar3.GL873566 13750294 4 + 13852661 CA-TT i otoGar3.GL873566 I 290 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I a score=130064.000000 s hg38.chr16_GL383557v1_alt 86079 22 + 89672 TTTTtaattaaattaaaaataa------------------ s panTro5.chr16 21517557 22 - 81586097 TTTTtaattaaattaaaaataa------------------ i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578655 22 - 90481686 TTTTtaattaaattaaaaataa------------------ i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812205 22 + 3010529 TTTTtaattaaattaaaaataa------------------ i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931553 22 + 163208435 TTTTtaattaaattaaaaataa------------------ i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397839 22 - 74971481 TTtttaattaaattaaaaataa------------------ i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110767 22 - 78541002 TTtttaattaaattaaaaataa------------------ i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508974 22 + 26466322 TTtttaattaaattaaaaataa------------------ i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20830810 22 + 43916225 TTTTtaattaaattaaaaataa------------------ i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58261604 22 + 75399963 TTtttaattaaattaaaaataa------------------ i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828180 22 - 7209941 TTttaaattaaattaaaaataa------------------ i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576714 22 + 3907144 TTtttaattaaattaaaaataa------------------ i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6383780 21 + 6628207 -ctaaaattacatgaaaaagaa------------------ i saiBol1.JH378225 C 0 I 840 s otoGar3.GL873566 13750298 40 + 13852661 TTTAAAATCACTATAAAGTTATCTTGTAACATCCGAACAT i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e calJac3.chr20 21572134 513 - 44557958 I a score=56205.000000 s hg38.chr16_GL383557v1_alt 86101 11 + 89672 atgcataaata s panTro5.chr16 21517579 11 - 81586097 atgcataaata i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578677 11 - 90481686 atgcataaata i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812227 11 + 3010529 atgcataaata i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931575 11 + 163208435 atacataaata i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397861 11 - 74971481 ataaataaata i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110789 11 - 78541002 ataaataaata i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14508996 11 + 26466322 ataaataaata i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20830832 11 + 43916225 ataaataaata i cerAty1.NW_011999143v1 C 0 I 187 s chlSab2.chr5 58261626 11 + 75399963 ataaataaata i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828202 11 - 7209941 ataaataaata i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576736 11 + 3907144 ataaataaata i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13750338 11 + 13852661 AGACAATGATA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e saiBol1.JH378225 6383801 840 + 6628207 I e calJac3.chr20 21572134 513 - 44557958 I a score=23276.000000 s hg38.chr16_GL383557v1_alt 86112 4 + 89672 CAAA s panTro5.chr16 21517590 4 - 81586097 CAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578688 4 - 90481686 CAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812238 4 + 3010529 caaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931586 4 + 163208435 caaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21397872 4 - 74971481 CAAA i rheMac8.chr20 C 0 I 181 s macFas5.chr20 21110800 4 - 78541002 CAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509007 4 + 26466322 CAAA i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58261637 4 + 75399963 CAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828213 4 - 7209941 CAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 576747 4 + 3907144 CAAA i colAng1.NW_012123265v1 C 0 C 0 s otoGar3.GL873566 13750349 4 + 13852661 CAGA i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I e saiBol1.JH378225 6383801 840 + 6628207 I e calJac3.chr20 21572134 513 - 44557958 I a score=9185.000000 s hg38.chr16_GL383557v1_alt 86116 3 + 89672 -GGT s panTro5.chr16 21517594 3 - 81586097 -GGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578692 3 - 90481686 -GGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812242 3 + 3010529 -ggt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931590 3 + 163208435 -ggt i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21110804 3 - 78541002 -GGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509011 3 + 26466322 -GGT i macNem1.NW_012011355v1 C 0 I 178 s chlSab2.chr5 58261641 3 + 75399963 -GGT i chlSab2.chr5 C 0 I 176 s manLeu1.NW_012101698v1 6828217 3 - 7209941 -GGT i manLeu1.NW_012101698v1 C 0 I 173 s colAng1.NW_012123265v1 576751 3 + 3907144 -GGt i colAng1.NW_012123265v1 C 0 I 488 s otoGar3.GL873566 13750353 3 + 13852661 GAG- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e rheMac8.chr20 21397876 181 - 74971481 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I e saiBol1.JH378225 6383801 840 + 6628207 I e calJac3.chr20 21572134 513 - 44557958 I a score=1866.000000 s hg38.chr16_GL383557v1_alt 86119 2 + 89672 AT s panTro5.chr16 21517597 2 - 81586097 AT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578695 2 - 90481686 AT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812245 2 + 3010529 at i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931593 2 + 163208435 at i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21110807 1 - 78541002 -T i macFas5.chr20 C 0 I 170 s otoGar3.GL873566 13750356 2 + 13852661 AG i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e macNem1.NW_012011355v1 14509014 178 + 26466322 I e rheMac8.chr20 21397876 181 - 74971481 I e colAng1.NW_012123265v1 576754 488 + 3907144 I e manLeu1.NW_012101698v1 6828220 173 - 7209941 I e chlSab2.chr5 58261644 176 + 75399963 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I e saiBol1.JH378225 6383801 840 + 6628207 I e calJac3.chr20 21572134 513 - 44557958 I a score=2819.000000 s hg38.chr16_GL383557v1_alt 86121 4 + 89672 AAAC s panTro5.chr16 21517599 4 - 81586097 AAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578697 4 - 90481686 AAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812247 4 + 3010529 aaat i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931595 4 + 163208435 aaat i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21110978 4 - 78541002 AAAC i macFas5.chr20 I 170 C 0 s otoGar3.GL873566 13750358 3 + 13852661 GAA- i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e macNem1.NW_012011355v1 14509014 178 + 26466322 I e rheMac8.chr20 21397876 181 - 74971481 I e colAng1.NW_012123265v1 576754 488 + 3907144 I e manLeu1.NW_012101698v1 6828220 173 - 7209941 I e chlSab2.chr5 58261644 176 + 75399963 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I e saiBol1.JH378225 6383801 840 + 6628207 I e calJac3.chr20 21572134 513 - 44557958 I a score=11335.000000 s hg38.chr16_GL383557v1_alt 86125 5 + 89672 ATAGC s panTro5.chr16 21517603 5 - 81586097 ATAGC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578701 5 - 90481686 ATAGC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812251 5 + 3010529 ataGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931599 5 + 163208435 ataGC i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21110982 3 - 78541002 --AGT i macFas5.chr20 C 0 C 0 s manLeu1.NW_012101698v1 6828393 5 - 7209941 ATAGT i manLeu1.NW_012101698v1 I 173 C 0 s calJac3.chr20 21572647 5 - 44557958 ACAGT i calJac3.chr20 I 513 C 0 s saiBol1.JH378225 6384641 5 + 6628207 ACAGT i saiBol1.JH378225 I 840 C 0 s otoGar3.GL873566 13750361 5 + 13852661 AGAGG i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e proCoq1.NW_012152729v1 2971367 160 + 9850184 I e dasNov3.JH569970 982315 151 + 1009443 I e aotNan1.NW_018500622v1 9318958 425 - 10531588 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e macNem1.NW_012011355v1 14509014 178 + 26466322 I e rheMac8.chr20 21397876 181 - 74971481 I e colAng1.NW_012123265v1 576754 488 + 3907144 I e chlSab2.chr5 58261644 176 + 75399963 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I a score=8323.000000 s hg38.chr16_GL383557v1_alt 86130 1 + 89672 G s panTro5.chr16 21517608 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578706 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812256 1 + 3010529 G i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931604 1 + 163208435 G i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398057 1 - 74971481 G i rheMac8.chr20 I 181 C 0 s macFas5.chr20 21110985 1 - 78541002 G i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509192 1 + 26466322 G i macNem1.NW_012011355v1 I 178 C 0 s chlSab2.chr5 58261820 1 + 75399963 G i chlSab2.chr5 I 176 C 0 s manLeu1.NW_012101698v1 6828398 1 - 7209941 G i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577242 1 + 3907144 G i colAng1.NW_012123265v1 I 488 C 0 s calJac3.chr20 21572652 1 - 44557958 G i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6384646 1 + 6628207 G i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9319383 1 - 10531588 G i aotNan1.NW_018500622v1 I 425 C 0 s proCoq1.NW_012152729v1 2971527 1 + 9850184 G i proCoq1.NW_012152729v1 I 160 C 0 s otoGar3.GL873566 13750366 1 + 13852661 G i otoGar3.GL873566 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e dasNov3.JH569970 982315 151 + 1009443 I e cebCap1.NW_016107433v1 3372274 698 - 5917169 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I a score=27149.000000 s hg38.chr16_GL383557v1_alt 86131 2 + 89672 CT s panTro5.chr16 21517609 2 - 81586097 CT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578707 2 - 90481686 CT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812257 2 + 3010529 CT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931605 2 + 163208435 CT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398058 2 - 74971481 CT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110986 2 - 78541002 CT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509193 2 + 26466322 CT i macNem1.NW_012011355v1 C 0 C 0 s chlSab2.chr5 58261821 2 + 75399963 CT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828399 2 - 7209941 CC i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577243 2 + 3907144 CT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572653 2 - 44557958 CT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6384647 2 + 6628207 CT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3372972 2 - 5917169 CT i cebCap1.NW_016107433v1 I 698 C 0 s aotNan1.NW_018500622v1 9319384 2 - 10531588 CT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2971528 2 + 9850184 CT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13750367 2 + 13852661 CT i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 982466 2 + 1009443 CT i dasNov3.JH569970 I 151 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I e cerAty1.NW_011999143v1 20830843 187 + 43916225 I a score=51321.000000 s hg38.chr16_GL383557v1_alt 86133 5 + 89672 TCTCC s panTro5.chr16 21517611 5 - 81586097 TCTCC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578709 5 - 90481686 TCTCC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812259 5 + 3010529 TCTCC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931607 5 + 163208435 TCTCA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398060 5 - 74971481 TCTCG i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110988 5 - 78541002 TCTCG i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509195 5 + 26466322 TCTCG i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831030 5 + 43916225 TCTCG i cerAty1.NW_011999143v1 I 187 C 0 s chlSab2.chr5 58261823 5 + 75399963 TCTCG i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828401 5 - 7209941 TCTCG i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577245 5 + 3907144 TCTCG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572655 5 - 44557958 TCTCA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6384649 5 + 6628207 TCTCA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3372974 5 - 5917169 TCTCA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9319386 5 - 10531588 TCTCA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2971530 5 + 9850184 TTTCA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13750369 5 + 13852661 TTTCA i otoGar3.GL873566 C 0 C 0 s dasNov3.JH569970 982468 5 + 1009443 TTTGA i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80496357 1389 + 88915250 I e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I a score=847502.000000 s hg38.chr16_GL383557v1_alt 86138 66 + 89672 AGATTCTTCTAGGCTGC-TGTGCCCTATCTACAATCAAACAAGACGAACTGGAAGT---GAGCAGTGTCT s panTro5.chr16 21517616 66 - 81586097 AGATTCTTCTAGGCTGC-TGCGCCCTATCTACAATCAAACAAGACGAACTGGAAGT---GAGCAGTGTCT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578714 66 - 90481686 AGATTCTTCTAGGCTGC-TGCGCCCTATCTACAATCAAACAAGACGAACTGGAAGT---GAGCAATGTCT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812264 66 + 3010529 AGATTCTTCTAGGCTGC-TGCGCCCTATCTACAATCAAACAAGACGAACTGGAAGT---GAGCAGTGTCT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931612 66 + 163208435 AGATTCTTCTAGGCTGC-TGTGCCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTTT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398065 66 - 74971481 AGATTCTTCTAGGCTGC-TGCACCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21110993 66 - 78541002 AGATTCTTCTAGGCTGC-TGCACCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509200 66 + 26466322 AGATTCTTCTAGGCTGC-TGCACCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831035 66 + 43916225 AGATTCTTCTAGGCTGC-TGCGCCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58261828 66 + 75399963 AGATTCTTCTAGGCTGC-TGCGCCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828406 66 - 7209941 AGATTCTTCTAGGCTGC-TGCGCCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577250 66 + 3907144 AGATTCTTCTAGGCTGC-TGCACCCTATCTACAATCAGACAAGATGAACTGGAGGT---GAGCAGTGTCT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572660 66 - 44557958 AGATTCTTCTAAGCTGC-TGCGCCCTATCTACGATCAGACTAGATGAACCGGAGGT---GAGGAGTGTCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6384654 66 + 6628207 AGATTCTTCTAAGCTGC-TGCGTGCTATCTATACTCAGACTAGATGAACTGGAGGT---GAGAAGTGTCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3372979 66 - 5917169 AGATTCTTCTAAGCTGC-TGCGCCCTATCTACAATCAGACTGGATGAACTGGAGGT---GAGGAGTGTCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9319391 66 - 10531588 AGATTCTTCTAAGCTGC-TGCACCCTATCTACAATCAGACTAGATGAACTAGAGGT---GAGGAGTGTCT i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2971535 67 + 9850184 AGATTCTTCTAGGTTACTTGTGCCTTATCTACAATCAGACTGGATGAACTCTGGGT---AAGGAGTATCT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13750374 58 + 13852661 AGATCTTT--------CTTGTGTC-TATGTACAATCAGACTGAATGAACTCTGGGT---GAGAAGTGTCA i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80497746 66 + 88915250 AGATTCTTCTAGTGTACTTGTGGCCTATCTA-AATCAGACTAGATTAACTGGCGGT---GGTGAGTGTCT i canFam3.chr5 I 1389 C 0 s dasNov3.JH569970 982473 63 + 1009443 AGATTCTTCTAGGCTATTTGTGCCCT-TGTA----CAGACTGGATTAACTGTGGGTCTGGAGCAGTCT-- i dasNov3.JH569970 C 0 C 0 e micMur3.chr20 54963968 237 + 72247402 I e mm10.chr8 22495301 1447 - 129401213 I a score=2816417.000000 s hg38.chr16_GL383557v1_alt 86204 208 + 89672 AAAGAAAATCTCCCTGCTAACTAATCTCTTGGAGTATCCTGTATTCTCTAACCAATTGTTAGGTA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCAGGATCAGGAACC--AGTGTT----CATGGCACGTCACTAAGGCTGCTTTCTC-AACTCACCCCACAAGGGTGTACATCAACCACT s panTro5.chr16 21517682 208 - 81586097 AAAGAAAATCTCCCTGCTAACTAATCTCTTGGAGTATCCTGTATTCTCTAACCAATTGTTAGGTA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCAGGATCAGGAACC--AGTGTT----CATGGCATGTCACTAAGGCTGCTTTCTC-TACTCACCCCCCAAGGGTGTACATCAACCACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578780 208 - 90481686 AAAGAAAATCTCCCTGCTAACTAATCTCTTGGAGTATCCTGTATTCTCTAACCAATTGTTAGGTA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCAGGATCAGGAACC--AGTGTT----CATGGCATGTCACTAAGGCTGCTTTCTC-TACTCACCCCCCAAGGGTGTACGTCAACCACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812330 208 + 3010529 AAAGAAAATCTCCCTGCTAACTAATCTCTTGGAGTATCCTGTATTCTCTAACCAATTGTTAGGTA-----------CTATGGAAACAATGTGGGCTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCAGGATCAGGAACC--AGTGTT----CATGGCACGTCACTAAGGCTGCTTTCTG-TACTCACCCCCCAAGGGTGTACATCAACCACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931678 206 + 163208435 AAAGAAAATCT-CCTGCTAACTAATCTCTTGGAGTATCCTGTATTCTCTAACCAATTGTTAGGTA-----------CTATGGAAACAATGTGAGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCAGGATCAGGAACC--AGTGTT----CGTGGCACGTCACTAAGGCTGCTTTCTC-TACTCACCCC-CAAGGGTGTACATCAACCACT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398131 207 - 74971481 GAAGAAAATCTCAATGCTAACTAATCTCTTGGAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCGGGATCAGGAACC--AGTGTT----CGTGGCACATCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAGGTTGTACATCAACCACT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111059 207 - 78541002 GAAGAAAATCTCAATGCTAACTAATCTCTTGGAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCGGGATCAGGAACC--AGTGTT----CGTGGCACATCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAGGTTGTACATCAACCACT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509266 207 + 26466322 GAAGAAAATCTCAATGCTAACTAATCTCTTGGAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCGGGATCAGGAACC--AGAGTT----CGTGGCACATCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAGGTTGTACATCAGCCACT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831101 207 + 43916225 GAAGAAAATCTCAATGCTAACTAATCTCTTGGAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCGGGATCAGGAACC--AGTGTT----CGTGGCACATCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAAGTTGTACATCAACCACT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58261894 207 + 75399963 GAAGAAAATCTCAATGCTAACTAATCTCTTGGAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACG---TCGGGATCAGGAACC--AGTGTT----CGTGGCACATCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAGGTTGTACATCAACCACT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828472 207 - 7209941 GAAGAAAATCTCAATGCTAACTAATCTCTTGAAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCGGGATCAGGAACC--AGTGTT----CGTGGCACATCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAGGTTGTACATCAACCACT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577316 207 + 3907144 GAAGAAAATCTCAATGCTAACTAATCTCTTGGAGAATCCTGCATTCTCTAACCAATTGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTACAACA---TCGGGATCAGGAACC--AGTGTT----CGTGGCACGTCACTAAGGCTGCTTTCTC-TGCTCACCCC-CGAGGTTATACATCAACCACT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572726 207 - 44557958 GAAGAAAATCTCCCTGTTAACTAATCTCTGGGAGAATCCTGTACTCTCTAATCAAATGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCGAAATTTATCTTCCTCCAGTACAACA---TCAGGATCAGGAACC--AGTATT----CATGGCACATCACTGAGGCTGTTTTCTC-TATTCAAACC-TCAGGTTGTACATCAACCGCT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6384720 207 + 6628207 GAAGAAAATCTCCCTGCTAACTAATCTCTGGGAGAGTCCTGTACTCTCTAATCAAATGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGTATTTTCCTAAACTTATCTTCCTCTGGTACAACA---TCAGGATCAGGAACC--AGTGTT----CGTGGCACATCACTGAGGCTGTTTTCTC-TAGTCAAACC-TCAGGTTGTACATCAACCGCT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373045 207 - 5917169 GATGAAAATCTCCCTGGTAACTAATCTCTGGGAGAATCCTGTACTCTCTAATCAAATGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGCATTTTCCTAAACTTACCTTCCTCCAGTACAACA---TCAAGATCAGGAACC--AGTGTT----CATGGCACATCACTGTGGCTGTTTTCTC-TATTCAAACC-TCAGGTTGTACATCAACCGCT i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9319457 207 - 10531588 GAAGAAAATCTCCCTGCTAACTAATCTCTGGGAGAATCCTGCACTCTCTGATCAAATGTTAGATA-----------CTATGGAAACAATGTGGGTTTTCAGATGTATTTTCCTAAACTTATCTTCCTCCAGTATAACA---TCAGGATCAGGAACC--AGTGTT----CGTGGCACATCACTGAGGCTGTTTTCTC-TATTTAAACC-TCAGGTTGTACATCAACCGCT i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54964205 212 + 72247402 AAAAAAAATCCCTCTGCTAACTTATCTTTTAGAGAATCCTGTATTCTCTAACCAGTTGTTAGATA-----------CCATAGAAATGACATGGG-TTTCAGATGCATTTCCCTAAACTCATCTTCCCCCAGTATTACA---TCAGGATGTGACATCTAAGTATTTTTACAGGGCATGTGACTAACCCTGCTTTCTC-TACTCACCGC-CCAGGCTGTACATCGATCACT i micMur3.chr20 I 237 C 0 s proCoq1.NW_012152729v1 2971602 212 + 9850184 GAAGAAAATCTCTCTGCTAACTAGTCTTGTAGAGAATCCCATATTCTCTAACCAGCTGGTAGATA-----------CCATAGCAATGACGTGGG-TTTCAGATGCATTTTCCTAAACTCATCTTCCTCCAGTGTAACG---TCAGGATTTGACATCTAAATATTTTCACAGAGCATGTCACTAACCCTGCTTTCTC-TACTCACCGC-CCAGGCTGTACATGGACCACT i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13750432 194 + 13852661 GAAGAAAATCTCTCTGCTAA------------------CAGTATTCTCTAATCAATTCTTAGATA-----------CCATGGAAATGATGTG-----TCAAATGCATTTTCCTAAACTCATCTTCCTCCAATACATCGGGATCAGGATGTGACATCTAGATATTTTTACAGGGCATGTCACTAACCCTGCTTTCTCTTACTAGCTAC-CCAGGATGCACGTCAATCACT i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80497812 190 + 88915250 GAAGAAAATCT---------------------------CTATATTCTCTAACTAGTTGTTAGGAGAGTAAGAGGGTTCAAAGAAACTATGTGTG-TTTCAAATGCACTTTCCTAAACTCATCTTCCTCCATAAAATAC---TGAGTATGAAGGAAC--ATTGTT----TATGCCCCATCATTGACCCGGCCTTCTG-TATTCATCCC-CCAGGTTGTTTGTATAAGACT i canFam3.chr5 C 0 I 3 s dasNov3.JH569970 982536 202 + 1009443 ----GAAATCTTTCTGCTAACTAATCTTTTAGAAAATATT--ATCCTTTAGAGAA-TAAGAGAGT-----------TCAGGGAAATTATATAGATTTTCAGATGCATTTTCCAATACTCATTTTCTTTCAGTACAACAT--TCAGGATAAGGTAAC--AGTGTT----TATGGCATGGCTCTGATGCTGCCTTCTC-TACTCACTCCTTCTGGTTGTTAATCAACTGCA i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22495301 1447 - 129401213 I a score=4684732.000000 s hg38.chr16_GL383557v1_alt 86412 249 + 89672 CT--AAACAGGGACTGTACTCACGTCAGCTACAGCAATGGACTGCACGTCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGATAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGCTTAGACACGCCCATATACTGCCTGTCCACAATCATCTTATGAACAGCGCTGCCTG--AAAAATCAGAAAA s panTro5.chr16 21517890 249 - 81586097 CT--AAACAGGGACTGTACTCACGTCAGCTACAGCAATGGACTGCACGTCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGATAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGCTTAGACACGCCCATATACTGCCTGTCCACAATCATCTTATGAACAGCGCTGCCTG--AAAAATCAGAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21578988 249 - 90481686 CT--AAACAGGGACTGTACTCACGTCAGCTACAGCAATGGACTGCACGTCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGATAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGCTTAGACACGCCCATATACTGCCTGTCCACAATCATCTTATGAACAGCGCTGCCTG--AAAAATCAGAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812538 250 + 3010529 CTA-AAACAGGAACTGTACTCACGTCAGCTACAGCAATGGACTGCACGTCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAAAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGCTTAGACACGCCCATATACTGCCTGTCCACAATCATCTTATGAACAGCGCTGCCTG--AAAAATCAGAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53931884 249 + 163208435 CT--AAACAGGGACTGTACTCACGTCAGCTACAGCAATGGACTGTACATCAGCATTAGCGATGAGATGGCTCTTCACAAGTGTTCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGATAAGTAGGCGACACCCCACACGATGCACTTCCGCTTAGACACGCCCATATACTGCCTGTCCACAATCATCTTATGAACAGTGCTGCCTG--AAAAATCAAAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398338 249 - 74971481 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGTTTAGACACACCCATATGCTGCCTGTCCACAATCATCTTATGAATAGCACTTCCTG--AAAATTCAGAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111266 249 - 78541002 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGTTTAGACACACCCATATGCTGCCTGTCCACAATCATCTTATGAATAGCGCTTCCTG--AAAATTCAGAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509473 249 + 26466322 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGTTTAGACACACCCATATGCTGCCTGTCCACAATCATCTTATGAATAGCGCTTCCTG--AAAATTCAGAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831308 249 + 43916225 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGTTTAGACACACCCATATGCTGCCTGTCCACAATCATCTTATGAATAGCGCTTCCTG--AAAATTCAGAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58262101 249 + 75399963 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGTTTAGACACGCCCATATGCTGCCTGTCCACAATCATCTTATGAACAGCGCTTCCTG--AAAATTCAGAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6828679 249 - 7209941 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGTACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGTTTAGACACACCCATATGCTGCCTGTCCACAATCATCTTATGAATAGCGCTTCCTG--AAAATTCAGAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577523 249 + 3907144 CT--AAACAGGGACTGTACTCACCTCAGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTGTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGACAAGAAGGCGACACCCCACACGATGCACTTCCGCTTAGACACGCCCATATACTGCCTGTCCACAATCATTTTATGAACAGCGCTTCCTG--AAAAATCAGAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21572933 251 - 44557958 CA--AAACAGGGACTGTACTCACGTTCGCTACAGCAATGGACTGAACGTCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCTGACAAGAAGGCAACACCCCACACGATGCACTTCCGCTTAGACACACCCATATATTGCCGGTCCACAATCATCTTATGAACAGTGCTGCCTGAAAAAAATCAGAAAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6384927 250 + 6628207 CA--AAACAGGGACTGTACTCACGTTGGCTACGGCAATGGACTGCACGTCAGCATTAGCGATGAGATGGCTCTTCACTAGCGTCCCAGTAGCCGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCCGACAAGAAGGCAACACCCCACACGATGCACTTCCGCTTAGACACACCCATATATTGCCTGTCCACAATCATCTTATGAACTGTGCTGCCTG-AAAAAATCAGAAAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373252 250 - 5917169 CA--AAACAGGGACTGTACTCACGTTGGCTACGGCAATGGACTGCACGTCAGCATTAGCGATGAGATGGCTCTTCACTAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCTGATAAGAAGGCAACACCCCACACGATGCACTTCCGCTTAGACACACCCATATATTGCCTGTCCACAATCATCTTATGAACAGCGCTGCCTG-AAAAAATCAGAAAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9319664 250 - 10531588 CA--AAACAGGGACTGTACTCACGTTGGCTACAGCAATGGACTGCACATCAGCATTAGCGATGAGATGGCTCTTCACAAGCGTCCCAGTGGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGATAGTGCCATCCGACAAGAAGGCAACACCCCACACGATGCACTTCCGCTTAGACACACCCATATATTGCCTGTCCACAATCATCTTACGAACAGCGCTGCCTG-AAAAAATCAGAAAA i aotNan1.NW_018500622v1 C 0 C 0 s micMur3.chr20 54964417 249 + 72247402 GA--AAACAAGGGCTGTACTCACGTCGGCTACAGCAATGGACTGCACGTCAGCATTTGTGATGAGATGGCTCTTCACAAGCGTCCCAGTAGCTGAATCCCAGAACTGCACTTTTCCAGCAGAGTCTGCACTTATGACGGTGCCATCAGACAAGAAGGCAACAGCCCACACGATACACTTCCGCTTAGACACGCCCATGTACTGCCTGTCCACAATCATCTTATGAATAGTGCTCCCTG--AAAAATAAGAAAA i micMur3.chr20 C 0 N 0 s proCoq1.NW_012152729v1 2971814 249 + 9850184 GA--AAACAGGGACTGTACTCACATCGGCCACAGCGATGGAATGCACATCAGCATTTGCGATGAGATGGCTCTTCACAAGCGTCCCGGTAGCTGAGTCCCAGAACTGCACTTTCCCAGAAGAGTCCGCACTTATGATGGTGCCATCAGACAAGAAGGCAACACCCCACACGATACACTTTCGCTTAGACACACCCATACACTGCCTATCCACAATCATCTTCCGAATAGTGCTCCCTG--AAAAATAAGAAAA i proCoq1.NW_012152729v1 C 0 C 0 s otoGar3.GL873566 13750626 249 + 13852661 CA--AAATGGGGACTGTACTCACATCGGCTACGGCAATGGACAGCACATCAGCGTTTGAGATGAGATGGTTCTTCACAAGCGTCCCAGTAGCTGAGTCCCAGAACTGTACTTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCCGACAAGAAGACAACACCCCACACAATGCATTTCCGCTTAGACGCACCCATATACTGTCTATCCACAGTCATCTTATGAATAGTGCTCCCTG--AAAAATAAGAAAA i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22496748 249 - 129401213 ct--gggcTGCGACCATACTCACATCAGCAACAGCAATAGACTGCACATCAGCATTTGCGACGAGATGACTCTTAACGAGTGTCCCAGTAGCAGAGTCCCACAACTGCACCTTTCCAACAGAGTCCACACTTATGACAGTGCCGTCGGACAAGAAGGCAACACCCCACACTATGCACCTGGACTTAGTCACTCCCAGGTGTTGCCTATCTAAAACCATCTTACGAATTATGCTCCCTG--AAAAGTAAGAAAG i mm10.chr8 I 1447 C 0 s canFam3.chr5 80498005 249 + 88915250 CA--AAATAGAGACCATACTCACATCAGATACAGCAATGGACTGCACATCAGCATTTGCGATGAGGTGGTTCTTCACAAGTGTCCCAGTAGCTGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCAGACAAGAAGGCCACTCCCCATATGATACACTTCCGCTTAGACACACCCATATATTGCCTATCCACCAGCATTTTCTGAACAGTGCTCCCTG--AAAAATAAGAAAA i canFam3.chr5 I 3 C 0 s dasNov3.JH569970 982738 249 + 1009443 --AAAATCAGGGACTATACTCACATCAGACACAGCAATGGACTGCACATCAGCATTTGCAATGAGGTGGTTCTTCACAAGTGTCCCAGTAGCAGAGTCCCAGAACTGCACCTTCCCAGCAGAGTCCACACTTATGACAGTGCCATCGGATAAGAAGGCCACGCCCCATATGATACACTTCCGCTTAGACACACCCATATATCGCCTATCCACGATCATTTTATGAATAGCACTCCCTG--AAAAATAAGAAAA i dasNov3.JH569970 C 0 C 0 a score=381294.000000 s hg38.chr16_GL383557v1_alt 86661 28 + 89672 GCACACCTTCAAATGGTACTTATTTCTC s panTro5.chr16 21518139 28 - 81586097 GCACACCTTCAAATGGTACTTATTTCTC i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579237 28 - 90481686 GCACACCTTCAAATGGTACTTATTTCTC i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812788 28 + 3010529 GCACACCTTCAAATGGTACTTATTTCTC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932133 28 + 163208435 GCACGCCTTCAAACGGTACTTATTTCTC i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398587 28 - 74971481 GCACATCTTTGAATGGTACTTATTTCTC i rheMac8.chr20 C 0 I 4 s macFas5.chr20 21111515 28 - 78541002 GCACATCTTTGAATGGTACTTATTTCTC i macFas5.chr20 C 0 I 4 s macNem1.NW_012011355v1 14509722 28 + 26466322 GCACATCTTTGAATGGTACTTATTTCTC i macNem1.NW_012011355v1 C 0 I 4 s cerAty1.NW_011999143v1 20831557 28 + 43916225 GCACATCTTTGAATGGTACTTATTTCTC i cerAty1.NW_011999143v1 C 0 I 4 s chlSab2.chr5 58262350 28 + 75399963 GCACATCTTTGAATGGTACTTATTTCTC i chlSab2.chr5 C 0 I 4 s manLeu1.NW_012101698v1 6828928 28 - 7209941 GCACATCTTTGAATGGTACTTATTTCTC i manLeu1.NW_012101698v1 C 0 I 4 s colAng1.NW_012123265v1 577772 28 + 3907144 GCACACCTTTGAATGGTACTTGCTTCTC i colAng1.NW_012123265v1 C 0 I 4 s calJac3.chr20 21573184 28 - 44557958 GCACACCTTCGAATGGTACTTATTTCTC i calJac3.chr20 C 0 I 4 s saiBol1.JH378225 6385177 28 + 6628207 GCACACCTTCAAATGGAACTTATTTCTC i saiBol1.JH378225 C 0 I 4 s cebCap1.NW_016107433v1 3373502 28 - 5917169 ACACATCTTCGAATGGTACTTATTTCTC i cebCap1.NW_016107433v1 C 0 I 4 s aotNan1.NW_018500622v1 9319914 28 - 10531588 GCACACCTTCGAATGGTACTTATTTCTC i aotNan1.NW_018500622v1 C 0 I 4 s proCoq1.NW_012152729v1 2972063 28 + 9850184 ACACACATTTGGATGGTACTTATTTCTC i proCoq1.NW_012152729v1 C 0 I 77 s otoGar3.GL873566 13750875 28 + 13852661 GAAAACATTTGGCTGGTACCCATTTTTC i otoGar3.GL873566 C 0 I 50 s mm10.chr8 22496997 16 - 129401213 GCACACGTT-----------TAGTTTT- i mm10.chr8 C 0 C 0 s canFam3.chr5 80498254 28 + 88915250 GCCCAAATTTGAATGGTACTTACTTCTT i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 982987 28 + 1009443 GCCCACAGTTGGATGGTCCTTATTTCTC i dasNov3.JH569970 C 0 I 4 a score=1232037.000000 s hg38.chr16_GL383557v1_alt 86689 169 + 89672 TGTCT----------------------------------------TCAAAATCT----------------------GCCTGCggccaaagtggaagg-----------------------------------------------------actgcttg----------------------------agccct-ggagtttaaggccag---cctaggcaacgaagt---gagacctcatctctacgaaac--aaca-taacaaaccCGCCTGCGGTAAGCATGAT-ATGGTAGGTGAGCTGACTGAA----C--AGTCAGCCTATAAAT s panTro5.chr16 21518167 169 - 81586097 TGTCT----------------------------------------TCAAAATCT----------------------GCCTGCggccaaagtggaagg-----------------------------------------------------actgcttg----------------------------agccct-ggagtttaaggccag---cctaggcaacaaagt---gagacctcatctctacgaaac--aaca-taacaaaccCGCCTGCGGTAAGCATGAT-ATGGTAGGTGAGCTGACTGAA----C--AGTCAGCCTATAAAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579265 169 - 90481686 TGTCT----------------------------------------TCAAAATCT----------------------GCCTGCggccaaagtggaagg-----------------------------------------------------actgcttg----------------------------agccct-ggagtttaaggccag---cctaggcaacaaagt---gagacctcatctctacgaaac--aaca-taacaaaccCGCCTGCGGTAAGCATGAT-ATGGTAGGTGAGCTGACTGAA----C--AGTCAGCCTATAAAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812816 169 + 3010529 TGTCT----------------------------------------TCAAAATCT----------------------GCCTGCggccaaagtggaagg-----------------------------------------------------actgcttg----------------------------agccct-ggagtttaaggccag---cctaggcaacaaagt---gagacctcatctctacgaaac--aaca-taacaaaccCGCCTGCGGTAAGCATGAT-ATGGTAGGTGAGCTGACTGAA----C--AGTCAGCCTATAAAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932161 165 + 163208435 TGTCT----------------------------------------TCAAAATCT----------------------GCCTGTggccaaagtggaagg-----------------------------------------------------actgcttg----------------------------agccct-ggagtttgaggccag---cctaggcaacaaagt---gagacctcatctctacgaaac--aaaa-taacaaaCCCGCTTGTGGTAAGCATGAT-ATGGTAGGTGGGCTGACTGAA----------CAGCCTATAAAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398619 173 - 74971481 TGTCT----------------------------------------TCAAAATCT----------------------GTCTGCggccaaagtgggagg-----------------------------------------------------attgcttg----------------------------agccaa-ggagtttgaggtgag---cctaggcaacaaagt---gagacctcatctctacaaaacaaaaca-taacaaaccagccagTGGTAAGCATGAT-ATGGTATGTGAGCTGACTGAAC--AC--AGTCAGCCTATAAAT i rheMac8.chr20 I 4 C 0 s macFas5.chr20 21111547 173 - 78541002 TGTCT----------------------------------------TCAAAATCT----------------------GTCTGCggccaaagtgggagg-----------------------------------------------------attgcttg----------------------------agccaa-ggagtttgaggcgag---cctaggcaacaaagt---gagacctcatctctacaaaacaaaaca-taacaaaccagccagTGGTAAGCATGAT-ATGGTATGTGAGCTGACTGAAC--AC--AGTCAGCCTATAAAT i macFas5.chr20 I 4 C 0 s macNem1.NW_012011355v1 14509754 173 + 26466322 TGTCT----------------------------------------TCAAAATCT----------------------GTCTGCggccaaagtgggagg-----------------------------------------------------attgtttg----------------------------agccaa-ggagtttgaggcgag---cctaggcaacaaagt---gagacctcatctctacaaaacaaaaca-taacaaaccagccagTGGTAAGCATGAT-ATGGTATGTGAGCTGACTGAAC--AC--AGTCAGCCTATAAAT i macNem1.NW_012011355v1 I 4 C 0 s cerAty1.NW_011999143v1 20831589 173 + 43916225 TGTCT----------------------------------------TCAAAATCT----------------------GTCTACAgccaaagcgggagg-----------------------------------------------------attgcttg----------------------------agccaa-ggagtttgaggcgag---cctaggcaacaaagt---gagacctcatctctacaaaacaaaaca-taacaaaccagccagTGGTAAGCATGAT-ATGGCAGGTGAGCTGACTGAAC--AC--AGTCAGCCTATAAAT i cerAty1.NW_011999143v1 I 4 C 0 s chlSab2.chr5 58262382 173 + 75399963 TGTCT----------------------------------------TCAAAATCT----------------------GTCTGCggccaaagtgggagg-----------------------------------------------------attgcttg----------------------------agccca-ggagtttgaggcgag---cctaggcaacaaagt---gagacttcatctctacaaaacaaaaca-taacaaaccagcctgtggtAAGCATGAT-ATGGTAGGTGAGCTGACAGAAC--AC--AGTCAGCCTATAAAT i chlSab2.chr5 I 4 C 0 s manLeu1.NW_012101698v1 6828960 173 - 7209941 TGTCT----------------------------------------TCAAAATCT----------------------GTCTGCAgccaaagtgggagg-----------------------------------------------------attgcttg----------------------------agccaa-ggagtttgaggcgag---cctaggcaacaaagt---gagacctcatctctacaaaacaaaaca-taacaaaccagccagTGGTAAGCATGAT-ATGGTAGGTGAGCTGACTGAAC--AC--AGTCAGCCTATAAAT i manLeu1.NW_012101698v1 I 4 C 0 s colAng1.NW_012123265v1 577804 169 + 3907144 TGTCT----------------------------------------TCAAAATCT----------------------GTCTGCggccaaagtgggagg-----------------------------------------------------attgcttg----------------------------aaccca-ggagtttgaggcgag---cctaggcaacaaagt---gagacctcatctctacaaaacaaaaca-taacaaaccagcctgtggtAAGCATGAT-ATG----GTGAGCTGACTGAAC--AC--AGTCAGCCTATAAAT i colAng1.NW_012123265v1 I 4 C 0 s calJac3.chr20 21573216 174 - 44557958 AGTCT----------------------------------------TCAAAATCC----------------------ATCTGTggccaaggtgagagg-----------------------------------------------------atcacttg----------------------------agcccaaggagtttgaggccag---cctaggcaacaaagt---gagaccttgtctctgtgaaacaaaaTG-TAACAAATCTGCCTGTGGTAAGCATGGT-ATGGTAGGTGAGCTGACTGAAC--AC--AGTCAGCCTGTAAAT i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6385209 174 + 6628207 AGTCT----------------------------------------TCAAAATCC----------------------ATCTGCggccaaggtgagagg-----------------------------------------------------atcacttg----------------------------agcccaaggagtttgaggccag---cctaggcaacaaagt---gagaccttgtctctgtgaaaaaaaatg-taacaaatctgcctgtggtgAGCATGGT-ATGGTAGGTGAGCTGACTGAAC--AC--AGCCAGCCTGTAAAT i saiBol1.JH378225 I 4 C 0 s cebCap1.NW_016107433v1 3373534 174 - 5917169 AGTCT----------------------------------------TCAAAACCC----------------------AACTGCggccaaggtgagagg-----------------------------------------------------atcacttg----------------------------agcccagggagtttgaggccag---cctaggcaacaaagt---gagaccttgtctccgagaaacaaaaCA-TAACAAATCTGCCTGTGGTAAGCATGGT-ATGGTAGGTGAGCTGACTGAAC--AC--AGCCAGCCTGTAAAT i cebCap1.NW_016107433v1 I 4 C 0 s aotNan1.NW_018500622v1 9319946 177 - 10531588 AGTCT----------------------------------------TCAAAATCC----------------------ATCTGCAgccaaggtgagagg-----------------------------------------------------atcactta----------------------------agcccaaggagtttgaggccag---cctaggcaacaaagt---gagaacttgtctctgtgaaaCAAAATGTTAACAAATCTGCCTGTGGTAAGCATGGT-ATGGTAGGTGAGCTGACTGAAC--ACAGAGTCAGCCTGTAAAT i aotNan1.NW_018500622v1 I 4 C 0 s otoGar3.GL873566 13750953 317 + 13852661 tgtctcccttggtagagtgctgtggtgccacagctcacagcaacctcaaactcttgggctcaagcgattctcctgcttcagcctcccaagtagctgggactacagacgccctccaatacacccagctatttttttgttgtagttgtcattgttgtttggcaggccagggctgagtgcaaacccaccagccct-ggtgtacggggccagtgtcctggccactgaactacaggcgctgagccTCTTTTAGTC-----T-TTTAAAGACTGCCTGTTGTGGGCATGAT-AAGGTATGTTAGCTGACTGAAC--AT--AGCCTGCCAGTAAAA i otoGar3.GL873566 I 50 I 1 s mm10.chr8 22497013 69 - 129401213 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTT-----------TTCA------AAACT---G----------------------CACA-----------------GGCAAGCAT-AC-ATGG--AGTTAGATGCCTGAACATAT--AGTTAGGGAGTAAAA i mm10.chr8 C 0 I 1 s canFam3.chr5 80498283 57 + 88915250 TGTCT----------------------------------------TCAAAACGC----------------------ACCTGTTA------------------------------------------------------------------GCTGCCTG----------------------------AGCACA----GATCACAAACAG---CC-----AGTAAAT-------------------------------------------------------------------------------------------------------- i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 983019 72 + 1009443 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCTTCGAAA---ACCA-TG-----------TGTGATGggcacaataacattaagttagctgcccgagc--ac--agacagccagtaagt i dasNov3.JH569970 I 4 C 0 e proCoq1.NW_012152729v1 2972091 77 + 9850184 I a score=722735.000000 s hg38.chr16_GL383557v1_alt 86858 48 + 89672 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAATGGTTACCTGAA s panTro5.chr16 21518336 48 - 81586097 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAATGGTTACCTGAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579434 48 - 90481686 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAATGGTTACCTGAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 812985 48 + 3010529 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAATGGTTACCTGAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932326 48 + 163208435 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAATGGTTACCTGAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398792 48 - 74971481 GGTAGTTCTGGTGAACCTGATCTGGGAACTCCAAAATGGTTACCTGAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111720 48 - 78541002 GGTAGTTCTGGTGAACCTGATCTGGGAACTCCAAAATGGTTACCTGAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509927 48 + 26466322 GGTAGTTCTGGTGAACCTGATCTGGGAACTCCAAAATGGTTACCTGAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831762 48 + 43916225 GGTAGTTCTGGTGAACCTGATCTGGGAACTCCAAAATGGTTACCTGAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58262555 48 + 75399963 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAACAGTTACCTGAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829133 48 - 7209941 GGTAGTTCTGGTGAACCTGATCTGGGAACTCCAAAATGGTTACCTGAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 577973 48 + 3907144 GGTAGTTCTGGTGAACCTGATCTCGGAACTCCAAAATGGTTACCTGAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573390 48 - 44557958 GGTGGTTCTGGTGAACCTGATATCAGAACTCCAGAATGGTTACCAGAA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385383 48 + 6628207 GCTGGTTCTGGTGAACCTGATCTCAGAACTCCAGAATGGTTACCTGAA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373708 48 - 5917169 GGTGGTTCTGGTGAACCTGATCTCAGAACTCCAGAATGGTTACCTGAA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320123 48 - 10531588 GGCAGTTCTGGTGAACCTGATCTCAGAACTCCAGAATAGTTATCTGAA i aotNan1.NW_018500622v1 C 0 C 0 s proCoq1.NW_012152729v1 2972168 48 + 9850184 GGTAGTTCTGGTGAACCCGGTCTCAGATCTCCAAAATGGTCACCTGAA i proCoq1.NW_012152729v1 I 77 N 0 s otoGar3.GL873566 13751271 48 + 13852661 GGTAGTTCTATTGAACCCAGTTTCAGAACTCCAGAATGTTTACCTGAG i otoGar3.GL873566 I 1 I 1 s mm10.chr8 22497083 46 - 129401213 GGTAGCTGGGTCGAACT--GTTTTAAAATTCCAAAATGGGATCCTGAA i mm10.chr8 I 1 I 1 s canFam3.chr5 80498340 48 + 88915250 ATTAGTTATGGTGGACTCAGTCTCAAAACACAAAAATGGTTACCTGTA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 983091 47 + 1009443 ggaagTTCTTGTGAACTGAATCTTGGAATTC-AAAATAATTACCTGAA i dasNov3.JH569970 C 0 C 0 a score=297248.000000 s hg38.chr16_GL383557v1_alt 86906 36 + 89672 GAGAAGGGGTGTTGGGAGAGCCTAACAGGAAAGGGA s panTro5.chr16 21518384 36 - 81586097 GAGAAGGGGTGTTGGGAGAGCCTAACAGGAAAGGGA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579482 36 - 90481686 GAGAAGGGGTGTTGGGAGAGCCTAACAGGAAAGGGA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813033 36 + 3010529 GAGAAGAGGTGTTGGGAGAGCCTAACAGGAAAGGGC i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932374 36 + 163208435 GAGAAGGGGTGTTGGGAGAGCCTAACAGGAATggga i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398840 36 - 74971481 GAGAAGGAGTATTGGGAGAGCCTGATAGGAATggga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111768 36 - 78541002 GAGAAGGAGTATTGGGAGAGCCTGATAGGAATggga i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14509975 36 + 26466322 GAGAAGGAGTATTGGGAGAGCCTGATAGGAATggga i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831810 36 + 43916225 GAGAAGGAGTATTGGGAGAGCCTGATAGGAATggga i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58262603 36 + 75399963 GAGAAGGTGTGTTGGGAGAGCCTAATAGGAATggga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829181 36 - 7209941 GAGAAGGAGTATTGGGATAGCCTGATAGGAATggga i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578021 36 + 3907144 GAGAAGGGGTGTTGGGAGAGCCTAATAGGAATggga i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573438 36 - 44557958 GAGAAGGGGCAAGGGGAAAGCCTAATACGAATGAGA i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385431 36 + 6628207 GAGAAGGGGCATGGGGAAAGCCTAATACAAATGAGA i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373756 36 - 5917169 GAGAAGGGGCATGGGGAAAGCCTAATGCGAATGAGA i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320171 36 - 10531588 GAGAAGAGGCATGGGGAAAGCCTATTATGAATGAGA i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13751320 36 + 13852661 AAAAGTGGAGGTGGAGAGACATGCACGGGGAGGGGA i otoGar3.GL873566 I 1 I 168 s mm10.chr8 22497130 29 - 129401213 AGGAAGGGGT-------GAAGTTCGCAGGAGGGAGG i mm10.chr8 I 1 C 0 s canFam3.chr5 80498388 21 + 88915250 -------GACTTTGGGAGGG--------AAAGGGGA i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 983138 1 + 1009443 ----------------------------------G- i dasNov3.JH569970 C 0 C 0 a score=1555855.000000 s hg38.chr16_GL383557v1_alt 86942 142 + 89672 TAGAAGGT--------------------------------------------------------------------------GCAAGGGAGGGAGG-------------------AAGGGAGGGAAGAGAATGAGAACAGAAA-CCCC-TTTGGTGGGGTGAAATGGAAA-GAGACATTTGggacattcactt-aaagctggtcaactgcacacacacatt--acactctgctcttttcc-a s panTro5.chr16 21518420 142 - 81586097 TAGAAGGT--------------------------------------------------------------------------GCAAGGGAGGGAGG-------------------AAGGGAGGGAAGAGAATGAGAACAGAAA-CCCC-TTTGGGGGGGTGAAATGGAAA-GAGACATTTGggacattcactt-aaagctggtcaactgcacacacacatt--acactctgctcttttcc-a i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579518 142 - 90481686 TAGAAGGT--------------------------------------------------------------------------GCAAGGGAGGGAGG-------------------AAGGGAGGGAAGAGAATGAGAACAGAAA-CCCC-TTTGGGGGGGTGAAATGGAAA-GAGACATTTGggacattcactt-aaagctggtcaactgcacacacacatt--acactctgctcttttcc-a i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813069 141 + 3010529 TAGAAGGT--------------------------------------------------------------------------GCAAGGGAGGGAGG-------------------AAGGGAGGGAAGAGAATGCTAACAGAAA-CCCC-TTTGGGGGGGTGAAATGGAAA-GAGACATTTGGGACATTCACTT-AAAGCTGGTCAACTGCACACACACACT--ACACTCTGCT-GTTTCC-A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932410 144 + 163208435 tagaaggt--------------------------------------------------------------------------gtgagagagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCCC-TTTGGGGGGGTGAAATGGAAA-GAGACATTTAGGACATTCACTT-AAAGCTGGTCAACTGCACACACACATTACACACTCTGCTCTTTTCC-A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21398876 143 - 74971481 tagaaggt--------------------------------------------------------------------------gcgagggagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCTCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGggacattcactt-aaagctggtcaactgcacacacacatt--acactctgctcttttcc-a i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111804 143 - 78541002 tagaaggt--------------------------------------------------------------------------gcgagggagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCTCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGGGACATTCACTT-AAAGCTGGTCAACTGCACACACACATT--ACACTCTGCTCTTTTCC-A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510011 144 + 26466322 tagaaggt--------------------------------------------------------------------------gcgagggagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCTCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGGGACATTCACTT-AAAGCTGGTCAACTGCACACACACATT--ACACTCTGCTCTTTTCCAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831846 143 + 43916225 tagaaggt--------------------------------------------------------------------------gcgagggaggaagg-------------------aagggagggaagagagtgagAACAGAAA-CCTCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGGGACATTCACTT-AAAGCTGGTCAACTGCACACACACATT--ACACTCTGCTCTTTTCC-A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58262639 143 + 75399963 tagaaggt--------------------------------------------------------------------------gcgagggagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCTCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGGGACATTCACTT-AAAGCTGGTCAACTGCACACACACATT--ACACTCTGTTCTTTTCC-A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829217 143 - 7209941 tagaaggt--------------------------------------------------------------------------gcgagggagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCTCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGGGACATTCACTT-AAAGCTGGTCAACTGCACACACACATT--ACACTCTGCTCTTTTCC-A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578057 143 + 3907144 tagaaggt--------------------------------------------------------------------------gcgagggagggagg-------------------aagggagggaAGAGAATGAGAACAGAAA-CCCCTTTTGGGGAGGTGAAATGGAAA-GAGATATTTGGGACATTCACTT-AACGCTGGTCAACTGCACACACACATT--ACACTCTGCTCTTTTCC-A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573474 140 - 44557958 TAGAAGGT------------------------------------------------------------------------------GAGAGGGAGG-------------------AAGTGAGGGGAGAGAACGAGAACAGAATCCCCCCTTTGGGGTGGTGAAACAGAAA-GAAACATTTGAGACATTCACTT-AAAGCTGGCCAACTGCACACATACGTT--ATACTCTGCTCTTTTCC-A i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385467 139 + 6628207 CAGAAGGC------------------------------------------------------------------------------GAGAGGGAGG-------------------AAGTAAGGGGAGAGAACAAGAACAGAAT-CCCCTTTTGGGGTGGTGAAATGGAAA-GAAACATTTGGGACATTCACTT-AAAGCTGGCCAACTGCACACATACATT--ATACTCTGCTCTTTTCC-A i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373792 139 - 5917169 CAGAAGGC------------------------------------------------------------------------------GAGAGGGAGG-------------------AAGCGAGGGGAGAGAATGAGAACAGAAT-CCCCTTTTGGGGTGGTGAAATGGAAA-GATACATTTGGGACATTCACTT-AAAGCTGGCCAACTGCACACATACAAT--ACACTCTGCTCTTTTCC-A i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320207 139 - 10531588 TAGAAGGC------------------------------------------------------------------------------GAGAGGGAGG-------------------AAGCGAGGGGAGAGAACGAAAACAGAAT-CCCCTTTTGGGGTGGTGAAAtggaaa-gaaacatttgggacattcactt-aaagctggccaactgcacacatacatt--acactctgctcttttcc-a i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13751524 236 + 13852661 tgggaggctgaggcaagagaatcacttatacccaagaatttgagtttgctgttaggtatgaagccatggcactctactgagggcaacagagagagagactctgtctcaaaaaaataaaaaagaaaaGAAAAGGTGGACAGGTA-CACTTTTGGGGGATGTGAAATGGAAA-GAGACACTTGGGACATGCACTT-AAAGCTGGCCAACTACACATACACATT--ACACTCTGCTCTTTCCc-a i otoGar3.GL873566 I 168 C 0 s mm10.chr8 22497159 126 - 129401213 ------------------------------------------------------------------------------------AAAAAAGGGAGG-------------------GAGAAAGAG-AGAGCAAAAGGACTGGCA-TTCCTTCTGGGGCACTGGCATGGAAG-GATCCCT-------GTTCACTTAAAAGCTGGCACACTGCATGTACACATC--ACACCCTGCATGTACAC-A i mm10.chr8 C 0 I 68 s canFam3.chr5 80498409 128 + 88915250 AGGACGGT--------------------------------------------------------------------------TAGAGACAGAAATT-------------------TGGGGGGGGGGGGGGTGGAGGAGAGGAG---------------GTGAAATGGAAAGGAGGCATTTGAGAC-TTTACTT-AAAACCGCCTAAAAGCA-ATGTTCATG--ACACTTGGCTCTTTTCT-A i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 983139 96 + 1009443 ----------------------------------------------------------------------------------------------GC-------------------AAGGCACGGAAGAAAAGGAAAAATGGAA-------------------------AA-GAGACATTTGAGACCCCCACTT-AAAGCTAACCAATTATGCACACATTTT--ACACT--GTTTCTTCCT-- i dasNov3.JH569970 C 0 C 0 a score=443528.000000 s hg38.chr16_GL383557v1_alt 87084 35 + 89672 aaatcccacaggaaagggagagat---c----agtgacaaaa s panTro5.chr16 21518562 35 - 81586097 aaatcccacaggaaagggagagat---c----agtgacaaaa i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579660 35 - 90481686 aaatcccacaggaaagggagagat---c----agtgacaaaa i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813210 35 + 3010529 AAATCCCacaggaaagggagagac---c----agtgacaaaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932554 35 + 163208435 AAATCCCacaggatagggagagaa---c----agtgacaaaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399019 35 - 74971481 aaatcccacaggaaagggagagaa---c----agtgacaaaa i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111947 35 - 78541002 AAATCCCacaggaaagggagagaa---c----agtgacaaaa i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510155 35 + 26466322 AAATCCCacaggaaagggagagaa---c----agtgacaaaa i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20831989 35 + 43916225 AAATTCCacaggaaagggagagaa---c----agtgacaaaa i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58262782 35 + 75399963 AAATCCCacaggaaagggagagaa---c----agtgacaaaa i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829360 35 - 7209941 AAATTCCacaggaaagggagagaa---c----agtgacaaaa i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578200 35 + 3907144 AAAACCCacaggaaagggagagaa---c----agtgacaaaa i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573614 35 - 44557958 AAATCCCacaggaaagggagagaa---c----agtgacaaaa i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385606 35 + 6628207 AAATCACacaggaaagggagaaaa---c----agtgacaaaa i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373931 35 - 5917169 AAATCCCacaggaaagggagagaa---t----agtcacaaaa i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320346 35 - 10531588 aaatcccacaggaaagggagagaa---c----agtgacaaaa i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13751760 38 + 13852661 aaaccccacaggaaagggagaaaaggca----agagacgaaa i otoGar3.GL873566 C 0 C 0 s canFam3.chr5 80498537 39 + 88915250 AAATACCAagaaatggagagagga---caacaaatgacaaaa i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 983235 35 + 1009443 Aaatgggaaagggagagaagacaa---c----agtgacaaaa i dasNov3.JH569970 C 0 C 0 e mm10.chr8 22497285 68 - 129401213 I a score=2238892.000000 s hg38.chr16_GL383557v1_alt 87119 197 + 89672 tttggggaactggaaagcagacaagtagtggc-act------------gacttagcagagccctgaaactaagtcccaggtcggcagagaggaa---------agccaagaagccacctgatttatactat-ggaatcctt---ggactcaggaattggg--gaccccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggatccgtt-------------aacagctggt s panTro5.chr16 21518597 197 - 81586097 tatggggaactggaaagcagacaagtagtggc-act------------gacttagcagagccctgaaactaagtctcaggtcagcagagaggaa---------agccaagaagccatctgatttatactat-ggaatcctt---ggactcaggaattgcg--gaccccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCTGTT-------------AACAGCTGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579695 197 - 90481686 tatggggaactggaaagcagacaagtagtggc-act------------gacttagcagagccctgaaactaagtcccaggtcagcagagaggaa---------agccaagaagccatctgatttatactat-ggaatcctt---ggactcaggaattgcg--gaccccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCCGTT-------------AACAGCTGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813245 197 + 3010529 tctggggaactggaaagcagacaagtagtggc-act------------gacttagcagagccctgaaactaagtcccaggtcagcagggaggaa---------agccaagaagccacctgatttatactat-ggaatcctt---ggactcaggaattggg--gaccccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCCGTT-------------AACAGCTGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932589 198 + 163208435 tttggggaactggaaagcagacaagtagtggcaact------------gacttagcagggccctgaaactaagtcccaggtcagcagagaggaa---------agtcaagaagccacctgatttatactat-ggaatcctt---ggactcaggaattggg--gaccccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggatccatt-------------aacagctgat i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399054 201 - 74971481 tttggggaattagaaagcagacaagtagtggcaatg------------gacttaggagagccctgaaactaagtcccaggtcagcagagaggaa------ggtggccaagaagccacctgaattatactat-ggaatcctt---agactcaggaactggg--gaacccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggatccgtt-------------accagctggt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21111982 201 - 78541002 tttggggaattggaaagcagacaagtagtggcaacg------------gacttaggagagccctgaaactaagtcccaggtcagcagagaggaa------ggtggccaagaagccacctgaattatactat-ggaatcctt---agactcaggaactggg--gaacccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCCGTT-------------ACCAGCTGGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510190 201 + 26466322 tttggggaattggaaagccgacaagtagtggcaacg------------gacttaggagagccctgaaactaagtcccaggtcagcagagaggaa------ggtggccaagaagccacctgaattatactat-ggaatcctt---agactcaggaactggg--gaacccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCCGTT-------------ACCAGCTGGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20832024 202 + 43916225 tttggggaattggaaagcagacaagtagtggcaacg------------gacttagcagagccctgaaactaagtcccaggtcagcagagaggaa------ggtggccaagaagccacctgaattatactatgggaatcctt---agactcaggaactggg--gaacccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCCATT-------------ACCAGCTGGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58262817 201 + 75399963 tttggggaactggaaagcagacaagtagtggcaacg------------gacttagcagagccctgaaactaagtcccaggtcagcagagaggaa------ggtagccaagaagccacctgatttatactat-ggaatcctt---agactcaggaactggg--gaacccagatattctagaa---a----agga---gtaagtggggctttaaa-gagggaTCCGTT-------------ACCAGCTGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829395 201 - 7209941 tttggggaattggaaagcagacaagtagtggcaacg------------gacttagcagagccctgaaactaagtcccaggtcagcagagaggaa------ggtggccaagaagccacctgaattatactat-ggaatcctt---agactcaggaactggg--gaacccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggatccgtt-------------accagctggt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578235 201 + 3907144 tttggggaactggaaagcagacaagtagtggcaatg------------gacttagcagagccctgaaactaagtcccaggtcagcagagaggaa------ggcagccaagaagccacctgatttatactat-ggaatcctt---agactcaggaattggg--gaacccagatattctagaa---a----agga---gtaagtggggcttcaaa-gagggaTCCGTT-------------ACCAGCTGGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573649 201 - 44557958 tctggggaattggaaaacagacaagtagtgacaacc------------gacttagcaaaaccctgaaactaagccctaggtcagcaaagaggaa---------agccacgcagccacctgatttgtactac-agaatcctt-caagactcaggaactggg--gaccccagatattctagaa---a----agga---gaaagtggggcttcaaaggaaggctccatt-------------aacagctggt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385641 201 + 6628207 tctagggaactgaaaaacagacaagtagtgacaatc------------aacttagcaaagccctgaaactaagtcctaggtcagccaagaagaa---------agccaagcagccacctgatttgtactat-agaatcctt-aaagactcaggaattggg--gaccccagatgctctagaa---a----agga---gaaagtggggcttcaaaggaagaatccatt-------------aacagctggt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3373966 202 - 5917169 tctaggaaattggaaaacagacaagtagtgacaacc------------gacttagcaaagccctgaaactaagtcctaggtcagccaagaggaa---------agccaagcagccacctgatttgtactat-agaatccttaaaagactcaggaagtagg--gaccccatatattctagaa---a----agga---gaaagtggggcttcaaaggaaggatccatt-------------tacagctggt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320381 201 - 10531588 tctggggaattggaaaacagacaagtagtgacaacc------------gacttagcaaagcactgaaactaagtcccaggtcagccaagaggaa---------agccaagcagccacctgatttgtactat-agaatcctt-aaagactcaggaatttgg--gaccccagatattctagaa---a----agga---gaaagtggggcttcaaaggaaggatccatt-------------aacagctggt i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13751798 207 + 13852661 ttctag-aactggagagcagacatgaggtgttaact------------gactcagtagcgccctgaaactgagtcctaagttggcagtgaagaa---------agccaagaagccatctgatttatactcc-ag----------tgactcaggaattggg--gagcccagatagtatagaaagga----aggg---aaaagtgaggcttcaaaggagggatcagttgaaactacgtttaagaaactgtc i otoGar3.GL873566 C 0 C 0 s mm10.chr8 22497353 166 - 129401213 TTTATAGGACAGGGAGAAAAGAAGACAGTGTCAAAGACTCAGGGTGGCAACCAAGCAGGACCTTGAAACCAAGATGCAGGTTAGCCTTAAGGAA---------AGCCAAGAAGCCACTTGACTTATTCTTG-------------ACACCCA---------------------------------C----AGGA---GGGACTGG----TCAAA----AGGTCATCT-------------AGAGGCTGCT i mm10.chr8 I 68 C 0 s canFam3.chr5 80498576 224 + 88915250 ttttgggaattaaaaagcaaacataaagtagtaact------------gacagagcagagccctgaaattaagacccaagtcaacgggggggtggggggggggagccaggaagccacttgatttataccat-gaaatcctcagaagattcagcaactgtggtgaccccaaaaactctggaa---a----cagaagtgaaaatggaactaaaaa-gagaaattggtt----caaagttttagaaacttat i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 983270 187 + 1009443 tctggggaactggaaagcagacaaggg------att------------gatttagcagacctctgacaat--gtccaaagcctgtggtggggag---------agctagaaagccaaatgatctgaac-ac-aga---------aggttcaggaattggt--gaccccagatactcttgga---agtggaggt---aaagatggagttaaaaa-gagtgatcgggt-------------gaaagtaagt i dasNov3.JH569970 C 0 I 43 a score=1382981.000000 s hg38.chr16_GL383557v1_alt 87316 131 + 89672 agacccctcagatAG-CCATGCCCTGACTAAGAAGGTGGGAAGCTCCC-AAAATGCACGTCAGCAGAATACT----------GGAGA--CGTTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagtg s panTro5.chr16 21518794 131 - 81586097 AGACCCCTCAGATAG-CCATGCCCTGACTAAGAAGGTGGGAAGCTCCC-AAAATGCACGTCAGCAGAATACT----------GGAGA--CGTTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21579892 131 - 90481686 AGACCCCTCAGATAG-CCATGCCCTGACTAAGAAGGTGGGAAGCTCCC-AAAATGCACGTCAGCAGAATACT----------GGAGA--CGTTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813442 131 + 3010529 AAACCCCTCAGATAG-CTATGCCCTGACTAAGAAGGTGGGAAGCTCCC-AAAATGCACGCCAGCAGAATACT----------GGAGA--CATTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932787 131 + 163208435 agacccctcagatag-ccatgccctgactaagaaggtgggaagctccc-aaaatgcacgtcagcagaatact----------ggaga--cgctgt---ctgaggagggctatcaggc------------agaagcagtatataaaaaccaggattaagtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399255 131 - 74971481 agaccccccagatag-ccatgccctaactaagaagctgggaagctccc-aaaaagcacgtcagcagaatact----------ggaga--tgctgt---ctgaggagggctatcaggc------------agaagcagtatatgaaaaccaggattaagtg i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21112183 131 - 78541002 AGACCCCCCAGATAG-CCATGCCCTAACTAAGAAGCTGGGAAGCTCCC-AAAAAGCACGTCAGCAGAATACT----------GGAGA--TGCTGT---CTGAGGAGGGCTATCAGGC------------AGAAGCAGTATAtgaaaaccaggattaagtg i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510391 131 + 26466322 AGACCCCCCAGATAG-CCATGCCCTAACTAAGAAGCTGGGAAGCTCCC-AAAAAGCACGTCAGCAGAATACT----------GGAGA--TGCTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagtg i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20832226 131 + 43916225 AGATCCCCCAGATAG-CCATGCCCTAACTAAGAAGCTGGGAAGCTCCC-AAAAAGCACGTCAGCAGAATACT----------GGAGA--TGCTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagtg i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58263018 131 + 75399963 AGACCCCCCAGATAG-CCATGCCCTGACTAAGAAGCTGGGAAGCTCCC-AAAAAGCACGTCAGCAGAATACT----------GGAGA--TGCTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagca i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829596 131 - 7209941 agatcccccagatag-tcatgccctaactaagaagctgggaagctccc-aaaaagcacgtcagcagaatact----------ggaga--tgctgt---ctgaggagggctatcaggc------------agaagcagtatatgaaaaccaggattaagtg i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578436 131 + 3907144 AGACCCCCCAGATAG-CCATGCCCTGACTAAGAAGCGGGGAAGCTCCC-AAAAAGCACGTCAGCAGAACACT----------GGAGA--TGCTGT---CTGAGGAGGGCTATCAggc------------agaagcagtatatgaaaaccaggattaagcg i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573850 127 - 44557958 agatccctcagagag-ccatgcc----ctaagaagctgggaagctccc-aaaacacacatcagcagaagact----------ggaga--cactgt---ctgaggagggttatcaggc------------agaaacaatatatgaaaaccaggattaagcg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385842 125 + 6628207 agatccctcagatag-ccatgcc----ctaagaagctgggaagctccc-aaa--acgcatcagcagaagact----------ggaga--cactgt---ctgaggaggattaccaggc------------agaaacaatatatgaaaaccaggattaagtg i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3374168 126 - 5917169 agatccctcagatag-ccatgcc----ctaagaagctaggaagctccc-aaaatgcacat-agcagaagact----------ggaga--caccgt---ctgaggagggttatcaggc------------agaaacaatatatgaaaaccaggattaagtg i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320582 127 - 10531588 agattcctcagatag-ccatgcc----ctaagaagctgggaagctccc-aaaatgcacatcagcagaagact----------ggaga--caccgt---ctgaggagggttatcaggc------------agaaacaatatatgaaaaccaggattaagtg i aotNan1.NW_018500622v1 C 0 C 0 s otoGar3.GL873566 13752005 139 + 13852661 agacccttcacataacccacacc----ctacgaaactgagcacctccc-aaaatccaccttgacagaaggtt--------caggatt--tactct---ctgaggc---ctaccaggcacaactgagagtaggagtatgatataaataaaagaattaaatg i otoGar3.GL873566 C 0 N 0 s mm10.chr8 22497519 136 - 129401213 GGACCTCG-AGGTAG-CAATCTCCTGAGTAAGCTGCCGGATATTAACT-AAACTCTATCTCCAGAGAAGACTTTCTTACATAAAAAG--CGTTGGGAACTGAGGCTGG------GAC------------AGAGGT-GTCTGGAAGGAAAACGGTCCAGTG i mm10.chr8 C 0 C 0 s canFam3.chr5 80498800 137 + 88915250 agatcctccagataa-ctattccctaactaaaaagccaggcaactccctaaacttcacttcaa-acaagaat----------ggagagtcattct---ctaa-------tatcaggcacaactaagggtgggattactatatggaaa-aaagataaagcg i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 983457 43 + 1009443 I a score=413673.000000 s hg38.chr16_GL383557v1_alt 87447 41 + 89672 -aacatttctca-ctgaatgttgagaacaccattc-tttttttt s panTro5.chr16 21518925 41 - 81586097 -aacatttctca-ctgaatgttgagaacaccattc-tttttttt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580023 41 - 90481686 -aacatttctca-ctgaatgttgagaacaccattc-tttttttt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813573 42 + 3010529 -aacatttctca-ctgaatgttgagaacaccattcttttttttt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932918 41 + 163208435 -aacgtttctca-ctgaatgttgagaacaccattc-tttttttt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399386 41 - 74971481 -aacatttctca-ctgaatgttgagaacaccattc-tttttttt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21112314 41 - 78541002 -aacatttctca-ttgaatgttgagaacaccattc-tttttttc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510522 40 + 26466322 -aacatttctca-ttgaatgttgagaacaccattc-ttttttt- i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20832357 41 + 43916225 -aacgtttctca-ttgaatgttgagaacaccattc-tttttttt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58263149 41 + 75399963 -aacctttctca-ttgaatgttgagaacaccattc-tttttttt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829727 41 - 7209941 -aacatttctca-ttgaatgttgagaacaccattc-tttttttt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578567 41 + 3907144 -aacattcctca-ttgaatgctgagaacaccattc-tttttttt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21573977 41 - 44557958 -aacatttctca-ttgaaagttgagaatataattc-tttttttt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6385967 41 + 6628207 -aacatttctca-ttggaagttgagaatatcattc-cttttttt i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3374294 41 - 5917169 -aacatttctca-ttgaaagttgagaatatcattc-tttttttt i cebCap1.NW_016107433v1 C 0 C 0 s aotNan1.NW_018500622v1 9320709 41 - 10531588 -aacatttctca-ttgaaagttgagaatatcattc-tttttttt i aotNan1.NW_018500622v1 C 0 I 675 s mm10.chr8 22497655 38 - 129401213 --AAACTGCTAACTTGAATGCCGACAACACCAGAT-TTCTC--- i mm10.chr8 C 0 C 0 s canFam3.chr5 80498937 39 + 88915250 aaaatttattaa-ctgaatgttgagaacacccatt-ttctt--- i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 983457 43 + 1009443 I a score=17732.000000 s hg38.chr16_GL383557v1_alt 87488 2 + 89672 cc s panTro5.chr16 21518966 2 - 81586097 cc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580064 2 - 90481686 cc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813615 2 + 3010529 cc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932959 2 + 163208435 cc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399427 2 - 74971481 cc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21112355 2 - 78541002 cc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510562 2 + 26466322 cc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20832398 2 + 43916225 ct i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58263190 2 + 75399963 cc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829768 2 - 7209941 ct i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578608 2 + 3907144 cc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21574018 2 - 44557958 tc i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6386008 2 + 6628207 tc i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3374335 2 - 5917169 cc i cebCap1.NW_016107433v1 C 0 I 92 s mm10.chr8 22497693 2 - 129401213 CT i mm10.chr8 C 0 C 0 s canFam3.chr5 80498976 2 + 88915250 cc i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I a score=29389.000000 s hg38.chr16_GL383557v1_alt 87490 4 + 89672 cctt s panTro5.chr16 21518968 4 - 81586097 cctt i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580066 4 - 90481686 cctt i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813617 4 + 3010529 cctt i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53932961 4 + 163208435 cctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399429 4 - 74971481 cctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21112357 4 - 78541002 cctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510564 4 + 26466322 cctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20832400 4 + 43916225 cctt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58263192 4 + 75399963 cctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829770 4 - 7209941 cctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578610 4 + 3907144 cctt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21574020 4 - 44557958 ccct i calJac3.chr20 C 0 I 48 s saiBol1.JH378225 6386010 4 + 6628207 ccct i saiBol1.JH378225 C 0 I 42 s mm10.chr8 22497695 4 - 129401213 CCTC i mm10.chr8 C 0 C 0 s canFam3.chr5 80498978 1 + 88915250 -c-- i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I e cebCap1.NW_016107433v1 3374337 92 - 5917169 I a score=2914876.000000 s hg38.chr16_GL383557v1_alt 87494 315 + 89672 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gagaatgaaa------------------------------------aaccatttctgaggaacataactga----------------cacaaaagaaaagatctgaagattc--tggcttcagggctaccccaaataagcagtccagccagatcattcttcagtgaaacccaagctcagtaagccacatg-atgcagtgatgag-atg-atcaccagaca----------------tg-------aggaaag---cct-------------------ttaacatgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaagaaacagg--cagagtgaaaaacacttgacaattatt------aatagcctt s panTro5.chr16 21518972 315 - 81586097 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gagaatgaaa------------------------------------aaccatttctgaggaacataactga----------------cacaaaagaaaagatctgaagattc--tggcttcagggctaccccaaataagcagtccagccagatcattcttcagtgaaacccaagctcagtaagccacatg-atgcagtgatgag-atg-atcaccagaca----------------tg-------aggaaag---cct-------------------ttaacatgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaagaaacagg--cagagtgaaaaacacttgacaattatt------aatagcctt i panTro5.chr16 C 0 I 4 s panPan2.chr16 21580070 315 - 90481686 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gagaatgaaa------------------------------------aaccatttctgaggaacataactga----------------cacaaaagaaaagatctgaagattc--tggcttcagggctaccccaaataagcagtccagccagatcattcttcagtgaaacccaagctcagtaagccacatg-atgcagtgatgag-atg-atcaccagaca----------------tg-------aggaaag---cct-------------------ttaacatgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaagaaacagg--cagagtgaaaaacacttgacaattatt------aatagcctt i panPan2.chr16 C 0 I 4 s gorGor5.CYUI01000018v1 813621 314 + 3010529 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gagaatg-aa------------------------------------aaccatttctgaggaacataactga----------------cacaaaagaaaagatctgaagattc--tggcttcagggctaccccaaataagcagtccagccagatcattcttcagtgaaacccaagctcagtaagccacatg-atgcagtgatgag-atg-atcaccagaca----------------cg-------aggaaag---cct-------------------ttaatatgaaaggctgaggccaaacggactaacagaaacaaataaatgaataacagggaagaaacagg--tggagtgaaaaacacttgacaattatt------aatagcctt i gorGor5.CYUI01000018v1 C 0 I 4 s nomLeu3.chr2 53932965 315 + 163208435 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gagaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcagggctaccccaaataagcagtccagccagatcattcttcagtgaaacccaagctcagtaagccacatg-atgcagtgatgag-atg-atcaccagaca----------------tg-------aggaaag---cct-------------------ttaacgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaagaaacagg--caaagtgaaaaacacttgacaattatt------aatagcctt i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21399433 302 - 74971481 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gaaaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcagggctacctggaataagcagtacagccagatcattcttcagtgaaatccaagctcagtaagccacaTG-ATGCAGTGAGGAG---------------A----------------tg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacacctgacaattatt------aatagcctt i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21112361 302 - 78541002 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gaaaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcagggctacccggaataagcagtacagccagatcattcttcagtgaaatccaagctcagtaagccacaTG-ATGCAGTGATGAG---------------A----------------tg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacacctgacaattatt------aatagcctt i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14510568 302 + 26466322 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gaaaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcagggctacccggaataagcagtacagccagatcattcttcagtgaaatccaagctcagtaagccacaTG-ATGCAGTGATGAG---------------A----------------tg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacacctgacaattatt------aatagcctt i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20832404 315 + 43916225 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gaaaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcaaggctatccggaataagcagtacagccagatcattcttcagtcaaatccaagctcagtaagccacaTG-ATGCAGTGATAAG-ATg-atcaacagaca----------------tg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacacctgataattatt------aatagcctt i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58263196 315 + 75399963 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------aaaaatgaaa------------------------------------aaccatttctgagaaacataactgg----------------cacaaaagaaaagatctgaagaatc--tggcttcagggctacctggaataagcagtgtagccagatcattcttcagtgaaacccaagctcagtaagccacaTG-ATGCAGTGATGAG-ATg-atcaacagaca----------------tg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacgcctgacaattatt------aatagcctt i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6829774 315 - 7209941 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gaaaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcagggctacccggaataagcagtacagccagatcattcttcagtgaaatccaagctcagtaagccacaTG-ATGCAGTGATAAG-ATg-atcaacagaca----------------tg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacacctgataattatt------aatagcctt i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 578614 315 + 3907144 agaatgctgatagccaggccaatactcaccag---------------------------------gcag----------gaaaatgaaa------------------------------------aaccatttctgaggaacataactgg----------------cacaaaagaaaagatctgaagattc--tggcttcagggctacccggaacaagcagtacagccagatcattcttcagtgaaacccaagctcagtaagccacaTG-ATGCAGTGATGAG-ATg-atcaacagaca----------------cg-------aggaaag---cct-------------------ttaatgtgaaaggcagaggccaaacggactaacagaaacaaataaatgaataacagggaggaaacagg--cagagtgaaaaacacctgacaattatt------aatagcctt i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21574072 310 - 44557958 agaacgctgatagccaggccaatactcactgg---------------------------------gaag----------gagaataaaa------------------------------------aatcatttctggggaacatcactgg----------------cacaggagaaaagatatgaagattc--tggcttcatgattaccctgaataagcagtttagccagatcattcttcagtgaaatccaagctcagtaagccacatg-atgcagtgatgag-atg-atcaccagaca----------------tg-----tgaggaaag---cct-------------------ttaatgtgaaagtcagaggccaaagggactaacagaaacaa-------aataacagggaggaaacagg--cagagtgaaaaacacttgaggattact------aatagcctt i calJac3.chr20 I 48 C 0 s saiBol1.JH378225 6386056 310 + 6628207 agaatgctgatagccaggccaatactcaccgg---------------------------------gcag----------gaggatgaaa------------------------------------aaccatttctggggaacataactgg----------------cacaggagaaaagatatgaagattc--tggcttcatgactaccctgaataagcagtctagacagatcattcttcagtgaaactcaagctcagtaagccacatg-atgcagtgatgag-atg-attgccagaca----------------tg-----tgaggaaag---cct-------------------ttaatgtgaaaggcagaggccaaagggactaacagaaacaa-------agtaacagggaggaaacagg--cagagtgaaaaacacttgacaattact------aatagtttt i saiBol1.JH378225 I 42 I 4 s cebCap1.NW_016107433v1 3374429 310 - 5917169 agaatgctgatagccaggccaatactcaccgg---------------------------------gcag----------gaggatgaaa------------------------------------aaccatttctggggaacataactgg----------------cacaagagaaaagatatgaagattc--tggcttcatggctaccctgaataagcagtctagccagatcattcttcagtgaaacccaagctcagtaagccacatg-atgcagtgatgag-atg-atcgccagaca----------------tg-----taaggaaag---cct-------------------ttaatgtgaaaggtagaggccaaagggactaacagaaacaa-------aataacagggaggaaacagg--cagagtgaaaaacacttgacaattact------aatagcctt i cebCap1.NW_016107433v1 I 92 C 0 s mm10.chr8 22497699 403 - 129401213 AGAACACTGACAGCTGGGCCTGTACTTACAGGACTCACGGGGACAGAATGGGGGAGTCTGAGAGTGCAGCTCAGTGGCAGAACATGGAACGCTCAGGGTTGGTTGATCTCTAGGACCCCCCCACCGACCCCCCCCCAAAAACCCAACTGATTGATTTCAAGTCACTCAAGAAAAAAAAAAGTATAAGCTTA--TGACTTCACAAGT-CCCCAGATAGGCCACCAAG--ATACCTCTCTGCAGGGAAGGCCATACTCAA-GAGCCCCACT-ATG--GTGACAGGCGCA-AACAGCACACA----------------TGGCATGGGAAGAAAGTCTCCT-------------------CTACTGAGAA------AAGCCAAGGAGACTAATAGAAACAA-CAAGAAAATAAACAGAAGG--ACAGG--AAGGGCGCAGAACACTTGCCGGATGTC------ACTAAC--- i mm10.chr8 C 0 C 0 s canFam3.chr5 80498979 348 + 88915250 agaataccaataaccagactatcac-----ag---------------------------------gcaa----------gaaaataaaa------------------------------------aa-catttctgggaaatatgaccag----------------cctaagaaaaaagatataaaaagccaatgtctttggaggttccccaaactaagactccagccagatcattcttcagtgaagctcatgagcaataagctccacacatgtggtcaggaa-aggaattaccagacaaaagcctgagcttttgtg-------agcaaag---cctgaatgtaaaaggcaaagcctgaatgtgaaaggcagaagccagagaaactatcagaaaaat--------ataccaggaaaaaaacagagcaagggtgaagaatatttgacaaatactatctcgaataacctt i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I a score=22880.000000 s hg38.chr16_GL383557v1_alt 87809 3 + 89672 aga s panTro5.chr16 21519291 3 - 81586097 aga i panTro5.chr16 I 4 C 0 s panPan2.chr16 21580389 3 - 90481686 aga i panPan2.chr16 I 4 C 0 s gorGor5.CYUI01000018v1 813939 3 + 3010529 aga i gorGor5.CYUI01000018v1 I 4 C 0 s rheMac8.chr20 21399735 3 - 74971481 aga i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21112663 3 - 78541002 aga i macFas5.chr20 C 0 I 4 s macNem1.NW_012011355v1 14510870 3 + 26466322 aga i macNem1.NW_012011355v1 C 0 I 1929 s cerAty1.NW_011999143v1 20832719 3 + 43916225 aga i cerAty1.NW_011999143v1 C 0 I 1006 s chlSab2.chr5 58263511 3 + 75399963 aga i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6830089 3 - 7209941 aga i manLeu1.NW_012101698v1 C 0 I 1907 s colAng1.NW_012123265v1 578929 3 + 3907144 tga i colAng1.NW_012123265v1 C 0 C 0 s saiBol1.JH378225 6386370 3 + 6628207 aga i saiBol1.JH378225 I 4 C 0 s cebCap1.NW_016107433v1 3374739 3 - 5917169 aga i cebCap1.NW_016107433v1 C 0 I 2130 s canFam3.chr5 80499327 3 + 88915250 aga i canFam3.chr5 C 0 C 0 e mm10.chr8 22498102 0 - 129401213 C e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I e calJac3.chr20 21574382 0 - 44557958 C e nomLeu3.chr2 53933280 0 + 163208435 C a score=27581.000000 s hg38.chr16_GL383557v1_alt 87812 10 + 89672 --gaagagtttc s panTro5.chr16 21519294 10 - 81586097 --gaagagtttc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580392 10 - 90481686 --gaagagtttc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813942 10 + 3010529 --gaagagtttc i gorGor5.CYUI01000018v1 C 0 C 0 s rheMac8.chr20 21399738 9 - 74971481 ---aagagtttc i rheMac8.chr20 C 0 I 1940 s macFas5.chr20 21112670 10 - 78541002 --gaagagtttc i macFas5.chr20 I 4 I 1820 s chlSab2.chr5 58263514 10 + 75399963 --gaagagtttc i chlSab2.chr5 C 0 I 2223 s colAng1.NW_012123265v1 578932 10 + 3907144 --gaggagtttc i colAng1.NW_012123265v1 C 0 I 1900 s saiBol1.JH378225 6386373 10 + 6628207 --gaagagtttc i saiBol1.JH378225 C 0 I 1305 s canFam3.chr5 80499330 10 + 88915250 aagagaagtc-- i canFam3.chr5 C 0 C 0 e mm10.chr8 22498102 0 - 129401213 C e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e calJac3.chr20 21574382 0 - 44557958 C e nomLeu3.chr2 53933280 0 + 163208435 C a score=3211.000000 s hg38.chr16_GL383557v1_alt 87822 6 + 89672 ggggtg s panTro5.chr16 21519304 6 - 81586097 ggggtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580402 6 - 90481686 ggggtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813952 6 + 3010529 agggtg i gorGor5.CYUI01000018v1 C 0 C 0 s canFam3.chr5 80499340 6 + 88915250 agtata i canFam3.chr5 C 0 I 188 e mm10.chr8 22498102 0 - 129401213 C e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I e calJac3.chr20 21574382 0 - 44557958 C e nomLeu3.chr2 53933280 0 + 163208435 C a score=61736.000000 s hg38.chr16_GL383557v1_alt 87828 120 + 89672 aggggaggggggagggatagca---ttaggagatatacctaacgct----------aaatgacgagttaatggg-------------tgcagca--------------caccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacat s panTro5.chr16 21519310 120 - 81586097 aggggaggggggagggatagca---ttaggagatatacctaacact----------aaatgacgagttaatggg-------------tgcagca--------------caccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacat i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580408 120 - 90481686 aggggaggggggagggatagca---ttaggagatatacctaacact----------aaatgacgagttaatggg-------------tgcagca--------------caccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacat i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 813958 117 + 3010529 aggggagggggga-ggatagca---ttag--gatatacctaacgct----------aaatgacgagttaatggg-------------tgcagca--------------caccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacat i gorGor5.CYUI01000018v1 C 0 C 0 s mm10.chr8 22498102 158 - 129401213 -AGTGGGGCTGGAGAGACAGAACACTTGCCGGATGTCACTAATGGTAgggctggagagacagcgagttgttcagtgtttgctgttcttgcagaagcctggagtttggttcccagcaccacccataacTACAGTCCTAGC-AGATTGCTTCATGAGCACAC i mm10.chr8 C 0 C 0 e canFam3.chr5 80499346 188 + 88915250 I e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I e calJac3.chr20 21574382 0 - 44557958 C e nomLeu3.chr2 53933280 0 + 163208435 C a score=16603.000000 s hg38.chr16_GL383557v1_alt 87948 51 + 89672 gtaccctaaaacttaaagtataataat----aataaaataaaataaa----------------------------ataaaaaa-------------- s panTro5.chr16 21519430 46 - 81586097 gtaccctaaaacttaaagtataataat---------aataaaataaa----------------------------ataaaaaa-------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580528 46 - 90481686 gtaccctaaaacttaaagtataataat---------aataaaataaa----------------------------ataaaaaa-------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814075 55 + 3010529 gtatcctaaaacttaaagtataataaaataaaataaaataaaataaa----------------------------ataaaaaa-------------- i gorGor5.CYUI01000018v1 C 0 C 0 s mm10.chr8 22498260 43 - 129401213 ATAATCAAAAAC-CAAACTACAGCTCT-----------TAAAAAAGA----------------------------AAGATCAG-------------- i mm10.chr8 C 0 I 8 s canFam3.chr5 80499534 96 + 88915250 gta-ccaaatacttaaaataaaatctaaataaaTAAATAAAAATAAACTTCCAGGAAGCAGAAAAAGTCAAAGAGATGAAAAATAAGAGAGGGGGAA i canFam3.chr5 I 188 C 0 e dasNov3.JH569970 983457 43 + 1009443 I e aotNan1.NW_018500622v1 9320750 675 - 10531588 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I e calJac3.chr20 21574382 0 - 44557958 C e nomLeu3.chr2 53933280 0 + 163208435 C a score=111528.000000 s hg38.chr16_GL383557v1_alt 87999 87 + 89672 agaaagagaagagttt-------------ctgtataatgaaa---cataaagagaatgctgtaaaa--------------------------------------------aagaagattcacga---a--aaaaaagaactctgg----------------aaatgtc s panTro5.chr16 21519476 87 - 81586097 agaaagagaagagttt-------------ctgtataatgaaa---cataaagataatgctgtaaaa--------------------------------------------aagaagattcacga---a--aaaaaagaactctgg----------------aaatgtc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580574 85 - 90481686 agaaagagaagagttt-------------ctgtataatgaaa---cataaagataatgctgtaaaa--------------------------------------------aagaagattcacg-------aaaaaagaactctgg----------------aaatgtc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814130 85 + 3010529 agaa--acaagagttt-------------ctgtataatgaaa---cataaagagaatgctgtaaaa--------------------------------------------aagaagattcacga---a--aaaaaagaactctgg----------------aaatgtc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53933280 90 + 163208435 agaaagagaagagttt-------------ctgtataatgaaa---caaaaagagaatgctataaaa--------------------------------------------aagaagattcacgaaaca--aaaaaagaactctgg----------------aaatgtc i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21574382 89 - 44557958 agaaacagaagagttt-------------ctgtataataaaa---caaaaagagaatgctataaaa--------------------------------------------atgaacattcagga---aacaaaaaagaactctga----------------aaatgtc i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9321425 89 - 10531588 agaaagagaagtgttt-------------ctgtataatgaaa---caaaaagataatgccgtaaaa--------------------------------------------atgaatattcagga---aacaaaaaagaactctga----------------aaatgtc i aotNan1.NW_018500622v1 I 675 C 0 s mm10.chr8 22498311 80 - 129401213 ---GCCGCAGGCTTAG-------------TTCCAGAACACAG---CTTAGCGAAGGCCC----AGG--------------------------------------------TTTAGTCTCCAGCA---G--CTGAAAGACCTTTGG----------------AGGTGGC i mm10.chr8 I 8 C 0 s canFam3.chr5 80499630 163 + 88915250 AGAGATAAAAAAAATTAAAGAGCCAACAACAAAATAGTAAAATTTCAGAAAGAAAATGAAGAGAAACTTATTTACAAAATAATTTTTTTGTTTGTTAACCAAATAATTATAAGAATTTTCCCCA---T--AACTGAgaacacttggatgatgtagtcagttaaacgtc i canFam3.chr5 C 0 I 116 e dasNov3.JH569970 983457 43 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=361509.000000 s hg38.chr16_GL383557v1_alt 88086 196 + 89672 aaaaatgaaaaactcaata-gaggattcaaagataaaaaagacaaactctcc-cagaaagcatagtaaaaagacaaagaaatgaaaaataagag---------------------------taaaagaatttccccccagaactgaaggacgtgggtattggattagaagaacctaccag------------------gtgtccagaacaa------ttaattgatccacataccaagaaacctaatta s panTro5.chr16 21519563 190 - 81586097 aaaaaagaaaaactcaata-gaggattcaaagataaaaaagacaaactctcc-cagaaagcatagtaaaaagacaaagaaatgaaaaa---------------------------------taaaagaatttccccccagaactgaaggacgtgggtattggattagaagaacctaccag------------------gtgtccagaacaa------ttaattgatccacataccaagaaacctaatta i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580659 196 - 90481686 aaaaaagaaaaactcaata-gaggattcaaagataaaaaagacaaactctcc-cagaaagcatagtaaaaagacaaagaaatgaaaaataagag---------------------------taaaagaatttgcccccagaactgaaggacgtgggtattggattagaagaacctaccag------------------gtgtccagaacaa------ttaattgatccacataccaagaaacctaatta i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814215 196 + 3010529 aaaaatgaaaaactcaata-gaggattcaaagataaaaaagacaaactctcc-cagaaagcatagtaaaaagacaaagaaatgaaaaataagag---------------------------taaaagaatttccccccagaactgaaggacgtgggtattggattagaagaacctaccag------------------gtgtccagaacaa------ttaattgatccacataccaagaaacctaatta i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53933370 194 + 163208435 aaaaatgaaaaactcaata-gaggattcaaagataaaaatgacaaa--ctcc-gagaaagcatagtaaaaagacaaagaaatgaaaaataagag---------------------------taaaagaatttccccccagaactgaaggacatgggtactggattaaaagaacctaccag------------------gtgtccagaataa------tcaattgatccacacaccaagaaacctaatta i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21574471 195 - 44557958 aaaaatgaaaaactcaaca-gacgattcaaagataaaaatgacaaactttcc-cagaaagcatagtaaaaagccaaagaaatttaaaataagag---------------------------tgaaagaattt-cccccagaacttaaggacacaggttttggattaaaagaatctaccag------------------gtgtccagaacaa------ttaactgatccacacaccaagaaacataatta i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9321514 194 - 10531588 aaaaatgaaaaactcaaca-gaggattcaaagataaaaatgacaaactttcc-cagaaagcatagtaaaaagccaaagaaatttaaaataagag----------------------------gaaagaattt-cccccagaacttaaggacacaggttttggattaaaagaacctaccag------------------gtgtccagaacaa------ttaactgatccacacaccaagaaacataatta i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22498391 206 - 129401213 TAAGTGAAAAATCCCACTACAAAGACTAAGATAGAAAAACAACAAACTTACCTTAGCAAGC--AGTGAAGTCAGGAAAGATCAAAGAGTAAGAA-----------------------AGGCCGAAAAAGT-------CAGAA-GACAGAAAGTCAGCACTGAAGTAACAAAAC--ACCAGCAAGGCAAGGGGGAACTCATCTTCAGAGCA--------CAACTGACTGGCACAAGACAAAAGCCAACTA i mm10.chr8 C 0 I 144 s canFam3.chr5 80499909 215 + 88915250 agaaaaaaaagaaaaaaga-aaaga---aaagaaagaaaagaaaa--------aagaaagaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaatcttaagaaaaaaaaatgt-ccctcaaaactgaaaaat---ggtttttgattaaaataatctaccaa------------------gtatctaatatgactgatgttaatggatccacacatcaagaaacctaattg i canFam3.chr5 I 116 C 0 e dasNov3.JH569970 983457 43 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=263356.000000 s hg38.chr16_GL383557v1_alt 88282 146 + 89672 ttacatttcataacagtaaggat----aaaacatcctaaaagctcctgggggaaaaaaaaata-aaacaggtcctacacaaagggat-aactctcagaatggcagcttacttgctaataatacgaggagctggaagacagcggagccagggc-- s panTro5.chr16 21519753 145 - 81586097 ttacatttcataacagtaaggat----aaaacatcctaaaagctcctggggggaaaaaaaa-a-aaacaggtcctacacaaagggat-aactctcagaatggcagcttacttgctaataatacgaggagctggaagacagcggagccagggc-- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580855 144 - 90481686 ttacatttcataacagtaaggat----aaaacatcctaaaagctcctgggggggaaaaaa--a-aaacaggtcctacacaaagggat-aactctcagaatggcagcttacttgctaataatacgaggagctggaagacagcggagccagggc-- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814411 146 + 3010529 ttacatttcataacagtaaggat----aaaacatcctaaaagctcctgggggaaaaaaaaata-aaacaggtcctacacaaagggat-aactctcagaatggcagcttacttgctaataatacgaggagctggaagacagcggagccagggc-- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53933564 146 + 163208435 ttacatttcataacagtaaggat----aaaacatcctaaaagctcctgggggaaaaacaaaca-aaacaggtcctatacaaagggat-aactctcagaatggcatctgatttgctaataatatggggagctggaagacagcggagccagggc-- i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21574666 148 - 44557958 ttatatttcgtaacagtaaggat-aaggaagcttcctaaaagctctcagggggaggaaaaa---aaacaggtcctatacaaagggatcaactctcagaatgccatctgacttgctaataataccaggagctaaaagacagagaagccagggc-- i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9321708 152 - 10531588 ttatatttcataacagtaaggataaaagaagcatcctaaaagctccccgggggaggaaaaaaacaaaacagtcctatacaaagggatcaactctcagaatgccatctgacttgctaataataccaggagctggaagacagagaagccagggc-- i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80500124 149 + 88915250 ttacatttcagaacagtaagaataaaggaaagatcctaacagctccttggaaaaacagaccaa-aaaaa---cctatacaaaagatc-ttctcccagcatggcatcagagtctatagtaatattcaaagctggaagacaatggagccaattccc i canFam3.chr5 C 0 C 0 e mm10.chr8 22498597 144 - 129401213 I e dasNov3.JH569970 983457 43 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=277310.000000 s hg38.chr16_GL383557v1_alt 88428 160 + 89672 ttcagaattctaagggaaaagaatttcc-aacctagaattctttctcatgcactcttactcaggatccacc-----aaagggt----aaaccaagaaagtgaataacacagaaatgggagatcctatccgatagagaagcaaaggagatcccgagaacaatggaaaaatc s panTro5.chr16 21519898 160 - 81586097 ttcagaattctaagggaaaagaatttcc-aacctagaattctttctcatgcactcttactcaggatccacc-----aaagggt----aaaccaagaaagtgaataacacagaaatgggagatcctatccgatagagaagcaaaggagatcctgagaacaatggaaaaatc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21580999 160 - 90481686 ttcagaattctaagggaaaagaatttcc-aacctagaattctttctcatgcactcttactcaggatccacc-----aaagggt----aaaccaagaaagtgaataacacagaaatgggagatcctatccgatagagaagcaaaggagatcctgagaacaatggaaaaatc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814557 161 + 3010529 ttcagaattctaagggaaaagaatttccaaacctagaattctttcttatgcactcttactcaggatccacc-----aaagggt----aaaccaagaaagtgaataacacagaaatgggagatcctatccgatagagaagcaaaggagatcccgagaacaatggaaaaatc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53933710 160 + 163208435 ttcagaattctaagggaaaagaatttcc-agcctagaattctttctcatgcactcttactcaggatccacc-----aaaggat----aaaccaagaaagtgagtaacacagaaataggagatcctatccgacagggaagcaaaggagatctcaagaacaatggaaaaatc i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21574814 135 - 44557958 ttc--------------------------aacctagaattctttctcatgtactcttactcaggatccacc-----aaaggat----aaaccaacacagtgaataacacagaaagacgggatcctattaaatagaaaagcaaagaagattcctaaaacaactgaaaaatc i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9321860 135 - 10531588 ttc--------------------------aaCCTAGAATTCTTTCTCATGTAATCTTACTCAGGAtccacc-----aaaggat----aaaccaagacagtgaataacacagaaagacgggatcctatcgaacagaaaagcaaaggagatctctaaaacaactgaaaaatc i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22498741 136 - 129401213 CTCAAAAGCCCTAGGGA---------CC-AACCAGAAGCT---------------TAACTCTCTGTCCACA-----CAATAATTAGAAAGGCATTAGACTTCCTAACAGGCAAAGAGGGAATCCTA---AACACAGAAGCAAAAGGGACCCTGGAAA-GACCGAAACACC i mm10.chr8 I 144 C 0 s canFam3.chr5 80500273 149 + 88915250 ttcaaaattctaaggaaaaataatttct-gagctag--------CTCATGAACCTT--CTAAtgatccaccaaacaaaaggat----aaatcagga-agtgaat-----ggtaactggggattccacctgagagaggagtaaaggagatccatggaatgactgagaaatc i canFam3.chr5 C 0 C 0 e dasNov3.JH569970 983457 43 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=243288.000000 s hg38.chr16_GL383557v1_alt 88588 110 + 89672 aatc-agagtttcagatct-cacagc----tgtgcagcaggccc-agagtggctaagccagatgggagtgggtcagaaggcaccgggagg-gacttattcacaaag--ataaaagtggag s panTro5.chr16 21520058 111 - 81586097 aatcaagagtttcagatct-cacagc----tgtgcagcaggccc-agagtggctaagccagatgggagtgggtcagaaggcaccgggagg-gacttattcacaaag--ataaaagtggag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581159 111 - 90481686 aatcaagagtttcagatct-cacagt----tgtgcagcaggccc-agagtggctaagccagatgggagtgggtcagaaggcaccgggagg-gacttattcacaaag--ataaaagtggag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814718 106 + 3010529 -----agagtttcaggtct-cacagt----tgtgcagcaggccc-agagtggctaagccagatgggagtgggtcagaaggcaccgggagg-gacttattcacaaag--ataaaagtggag i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53933870 110 + 163208435 aacc-agagttccagatct-cacagt----tgtgcagcaggccc-agggtggctaagccagatgggagcgggtcaaaaggcaccgggagg-gacttattcacaaag--ataaaagtggag i nomLeu3.chr2 C 0 C 0 s calJac3.chr20 21574949 110 - 44557958 aatc-agagttccagatct-cacagt----tgtgcagcaggccc-agagtggctaacccagacgagagtgggtcagaatgcactacgaga-gacttattcacaaag--ataaaagtagag i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9321995 110 - 10531588 attc-agagttccagatct-cacagt----tgtgcagcaggccc-agagtggctaacccagatgggagtgggtcagaatgtactacgagg-gacttattcacaaag--ataaaagtagag i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22498877 102 - 129401213 CGTC------TTCCAACCC-CACCCTTGTGTGTGCAGCATGTCC-CAAGCGGCTAAGCAAGACCAGA---AGTCAAAACA------AAGA-AACTTATTTTTAAGGACATAGAAATGGCA i mm10.chr8 C 0 I 8 s canFam3.chr5 80500422 106 + 88915250 -----aaggttcaaaacctacagaga----ggtacaacaggcccaaaaattggtatactagattgga---ggtcagaaggctctggggggagaatctttcaagaag--ataaaggtggta i canFam3.chr5 C 0 I 1 s dasNov3.JH569970 983500 102 + 1009443 aatc-agagttcaggatat-caaggt----tgtgcatcagaccagagactagctaa-ctagatgggagcaggtcagaaggctctgggaga-gacttc------aag--ataaagcaaa-- i dasNov3.JH569970 I 43 C 0 e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e cerAty1.NW_011999143v1 20832722 1006 + 43916225 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=649333.000000 s hg38.chr16_GL383557v1_alt 88698 265 + 89672 aaagaaaa------------tcagatggacttgaaccta----------atttatgcaactggaaaaatgtgggaatgtatcagta-------------------------------------------aGACAGAGAGACAGAGACA-----------CTATTaaacaataagtataccggaa--aagaaagaaaatttactatgtgagtagtatatacatagtcataa--taatgaaaaca-tcaattactaatttgaacaaagttataatataaccatactgggaggatcgggaggaagtgt----ggatgcctgtggcagacgg-tagaaaaagaggggcaagttgc s panTro5.chr16 21520169 265 - 81586097 aaagaaaa------------tcagatggacttgaaccta----------atttatgcaactggaaaaatgtgggaatgtatcagta-------------------------------------------aGACAGAGAGACAGAGACA-----------CTATTAAACAATAAGTATACCGGAA--AAGAAAGAAAATTTACTAtgtgagtagtatatacatagtcataa--taataaaaaca-tcaattactaatttgaacaaagttataatataaccatactgggaggatcaggagaaagtgt----ggatgcctgtggcagacgg-tagaaaaagaggggcaagttgc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581270 265 - 90481686 aaagaaaa------------tcagatggacttgaaccta----------atttatgcaactggaaaaatgtgggaatgtatcagta-------------------------------------------aGACAGAGAGACAGAGACA-----------CTATTaaacaataagtataccggaa--aagaaagaaaatttactatgtgagtagtatatacatagtcataa--taatgaaaaca-tcaattactaatttgaacaaagttataatataaccatactgggaggatcaggagaaagtgt----ggatgcctgtggcagacgg-tagaaaaagaggggcaagttgc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 814824 265 + 3010529 aaagaaaa------------tcagatggacttgaaccta----------ATTTATGCAACTGGAAAAATGTGGGAATCTATCAGTA-------------------------------------------AGACAGAGAGACAGAGGCA-----------CTATTaaacaataagtatacaggaa--aagaaagaaaatttactatgtgagtagtatatacatagtcataa--taatgaaaaca-tcaattactaatttgaacaaagttataatataaccatactgggaggatcaggagaaagtgt----ggatgcctgtggcagatgg-tagaaaaagaggggcaagttgc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53933980 264 + 163208435 aaagaaaa------------tcagatggacttgaatctc----------atttatgcaactggaaaagtgtgggaatgtatca-TA-------------------------------------------AGACACAGAGACAGAGACA-----------CTATTaaacaataagtatacaggaa--aagaaaggaaattgactatgtgagtagtatatacatagtcaaaa--taatgaaaaca-tcaactactaatctgaacaaagttataatatgaccatactgggaggatcaggagagagtgt----ggatacctgtggcagatgg-tagaaaaagaggggcaagttgt i nomLeu3.chr2 C 0 C 0 s cerAty1.NW_011999143v1 20833728 257 + 43916225 aAAGAAAA------------ccagatggacttgaaccta----------atttatgaaactggaaaaatgtgggattgtatcagta---------------------------------------------------agacagagaca-----------ctattaaacaatgaggatacaggaa--aagaaaggaaatttactatgtgagcagtatatacatagtcataa--taataaaaata-tcaactactaatctgaacaaagttataatataaccatactgggaggatcaggagaaagtgt----ggatgcctgtggcagatgg-tagaaaaagaggggcaagtcat i cerAty1.NW_011999143v1 I 1006 C 0 s calJac3.chr20 21575059 259 - 44557958 aaagaaaa------------ccagatggacctgaacctc----------atgtatgcaactggaaaaatgtggggctgtatcagtg-------------------------------------------agagagagagacagagaca-----------ctatgaaacaaaaagtatacaggaa--aagaaaaaa----tactactggagtagtatacacacagtcataa--taatgaaaa----caactactaatctgaacaaagttacaatataaccatactgggaggatcaggagaaagtat----gaatgcctgtggcagatggttagaaaaagagggccaagtcac i calJac3.chr20 C 0 C 0 s aotNan1.NW_018500622v1 9322105 261 - 10531588 aaagaaaa------------ccagatggacttgaaccta----------atgtatgcaactggaaaaatgtggggctgtatcagt---------------------------------------------gagagagagacagagaca-----------ctatgaaacaaaaagtatacaggaa--aagaaaaaaaacttactactcgagtagtatacacatagtcataa--taatgaaaa----caactactaaactgaacaaagttataatataaccatactgggaggatcaggagaaagtat----gaatgcctgtggcagatggttagaaaaagagggccaagtcgt i aotNan1.NW_018500622v1 C 0 C 0 s mm10.chr8 22498987 280 - 129401213 AAACAAAACCACCAAAATACTCAGATGTGTTTTTAGTCA----------GCTTACACAGCTGAAAGATTTCAAGAGTCAAGTAGAA-------------------------------------------GAACGCAGGGAGAGGAAGA-----------AAACTAAACAGGAAGCAGACGGGAAGGAAGGAAAGTAACTTCCTTTGTGAGTGGTGAACGTGGGGCC---A--TGATGGAAACAGCTGACTGCTTACCGGAACCCAGTCACAA-AGGAGCATGTGGGAAGGAGCAGGAGACCGTGTGCTCGGACACTTATGACACAAGG-TACAAAGGGAAGACTCAGGTGT i mm10.chr8 I 8 C 0 s canFam3.chr5 80500529 185 + 88915250 aaagaaaa------------tcaaat----ctgaaccta----------atttatacaactggaagaatttgaggatatatcagtg-------------------------------------------aGAca------------------------------aaacataacacatatgtgta-----------------------------tgtatacatgtacataggtggaggtaaaca-tcaa--aagaattagctaagagttatag-------------------------------at----ggctgcctctgaggagtgagaagggagagaggggcaatctgc i canFam3.chr5 I 1 I 253 s dasNov3.JH569970 983602 287 + 1009443 agcgaaaa------------cctgatgtgcctgaacctaaggagaacagatttgcactactggaagactttgggaacatattagtggtacgtacataaaaactgggagggaaaaaacaggcaggcaagcaggcaggcagatagggacagacagggaaggagggaagacaaaaagtacacaggaa--aggaaccataa-----------ggtagcatttagat---tataa--taatgaaacca-ttgacta----------------------------atactggaaggataaggagaaagtgt----gggtacatgaggcaggggg-tggaaaaggagagctaaatagt i dasNov3.JH569970 C 0 C 0 e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=463003.000000 s hg38.chr16_GL383557v1_alt 88963 174 + 89672 -agaagtcagtaaaaaatggtctaaagctgaaaaatcaaaatgtagcataa-----aaagcatgctaggatctg--cagtgatagataccaaaagaatcagctaagggtcacaagtgg-ttgc-ctcgaggagagtgagagagatat---agaaggactccctcttttttgtaataag-cttAAGGGA s panTro5.chr16 21520434 174 - 81586097 -agaagtcagtaaaaaatggtctaaagctgaaaaatcaaaatgtagcataa-----aaagcatgctaggatctg--cagtgatagataccaaaagaatctgctaagggtcacaagtgg-ttgc-ctcgaggagagtgagagagatat---agaaggactccctcttttttgtaataag-cttAAGGGA i panTro5.chr16 C 0 I 16 s panPan2.chr16 21581535 174 - 90481686 -agaagtcagtaaaaaatggtctaaagctgaaaaatcaaaatgtagcataa-----aaagcatgctaggatctg--cagtgatagataccaaaagaatctgctaagggtcacaagtgg-ttgc-ctcgaggagagtgagagagatat---agaaggactccctcttttttgtaataag-cttAAGGGT i panPan2.chr16 C 0 I 10 s gorGor5.CYUI01000018v1 815089 174 + 3010529 -agaagtcagtaaaaaatggtctaaagctgaaaaatcaaaatgtagcataa-----aaagcatgctaggttctg--cagtgatagataccaaaagaatcagctaagggtcacaagtgg-ttgc-ctcgaggagaatgagagagatat---agaaggactccctctcttttgtaataag-cttAAGGGA i gorGor5.CYUI01000018v1 C 0 I 8 s nomLeu3.chr2 53934244 171 + 163208435 -agaagtcagtaaaaaatggtctaaagctgaaaaatcaaaatgtagcataa-----aaagcatgctaggttctg--cagtgatagataccaaaagaatcagctaagggtcacaagtgg-ttgc-ctcgaggagagtcagagagatat---agaaggactc---cttttttgtaataag-cttAAGGGA i nomLeu3.chr2 C 0 I 4 s cerAty1.NW_011999143v1 20833985 174 + 43916225 -agaagtcagtaaaaaatggtctaaagctgaaaaatcaaaatgtagcataa-----aaagcatgctaggtgctg--cagtgatagataccaaaagaatcaggtaagggtcacaagtggtttgc-cttgaggagtgtgagagagagat---agaaggactccctct-ttttgtaataag-cTAAAGGAA i cerAty1.NW_011999143v1 C 0 I 2 s calJac3.chr20 21575318 176 - 44557958 -aaaagttaataaaagatggtctaaagctgaaaactcaaaatgtagcataa-----aaaggatgctaggtttcccacagtgataaataccaaaagaatcagctaagggtcacaagggg-ttgc-cttgaggagtgtgagagggatat---agagggactctctcttttttgtaataag-cttAAGGAA i calJac3.chr20 C 0 I 1 s aotNan1.NW_018500622v1 9322366 176 - 10531588 -aaaagtcagtaaaagatggtctaaagctgaaaactcaaaatgtagcataa-----aaagtatgctaggttctgcacagtgataaataccaaaagaatcagctaagggccacaagggg-ttgc-cttgaggagtgtgagaaggatat---agagggactctctcttttttgtaataag-cttaagaaa i aotNan1.NW_018500622v1 C 0 I 1 s mm10.chr8 22499267 161 - 129401213 -TGAAGTCAATAAC-----GTACAGAGATTAAAAACCACAATCCAGAATCA-----TGAACATGTCATGTATAG--CAG------AGCCCAAAACAGTCAGCTCACAGCTGCAGTGGC-CCAC-TTTGAGGAGTGGGAGAAGGG-AC---AGGGGGATTCCTACT-TTTTGAAAAAAG-CCTGAAGGA i mm10.chr8 C 0 I 1 s dasNov3.JH569970 983889 169 + 1009443 aaaaagtcaataaataatggtctaaaacagaaaaatgaaaatgtagcattatctttagagga--------------tactgataaatat---aagaatcagctaaaaatggaaagtgg-ttgcttttgaggacttggagaagga-atgtgggagggattcctgtatttttgtaacaagtcttaaggaa i dasNov3.JH569970 C 0 C 0 e canFam3.chr5 80500714 253 + 88915250 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e macFas5.chr20 21112680 1820 - 78541002 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=16059.000000 s hg38.chr16_GL383557v1_alt 89137 6 + 89672 tttttt s panTro5.chr16 21520624 6 - 81586097 tttttt i panTro5.chr16 I 16 C 0 s panPan2.chr16 21581719 6 - 90481686 tttttt i panPan2.chr16 I 10 C 0 s gorGor5.CYUI01000018v1 815271 6 + 3010529 tttttt i gorGor5.CYUI01000018v1 I 8 C 0 s nomLeu3.chr2 53934419 6 + 163208435 tttttt i nomLeu3.chr2 I 4 C 0 s macFas5.chr20 21114500 6 - 78541002 tttttt i macFas5.chr20 I 1820 C 0 s cerAty1.NW_011999143v1 20834161 6 + 43916225 tgtttg i cerAty1.NW_011999143v1 I 2 C 0 s calJac3.chr20 21575495 6 - 44557958 tctttt i calJac3.chr20 I 1 C 0 s aotNan1.NW_018500622v1 9322543 6 - 10531588 tccttt i aotNan1.NW_018500622v1 I 1 C 0 s mm10.chr8 22499429 5 - 129401213 TTCTT- i mm10.chr8 I 1 I 79 s dasNov3.JH569970 984058 6 + 1009443 ttcttt i dasNov3.JH569970 C 0 I 70 e canFam3.chr5 80500714 253 + 88915250 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=13784.000000 s hg38.chr16_GL383557v1_alt 89143 7 + 89672 ttttttg s panTro5.chr16 21520630 7 - 81586097 ttttttg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581725 7 - 90481686 ttttttg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815277 7 + 3010529 ttttttg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934425 7 + 163208435 ctttttg i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21114506 7 - 78541002 ttttttg i macFas5.chr20 C 0 C 0 s cerAty1.NW_011999143v1 20834167 7 + 43916225 ttttttg i cerAty1.NW_011999143v1 C 0 C 0 s calJac3.chr20 21575501 6 - 44557958 tttctt- i calJac3.chr20 C 0 I 4 s aotNan1.NW_018500622v1 9322549 6 - 10531588 tttttt- i aotNan1.NW_018500622v1 C 0 I 9 e canFam3.chr5 80500714 253 + 88915250 I e mm10.chr8 22499434 79 - 129401213 I e dasNov3.JH569970 984064 70 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I e saiBol1.JH378225 6386383 1305 + 6628207 I a score=107926.000000 s hg38.chr16_GL383557v1_alt 89150 44 + 89672 agacgcagtttcactcttgttg-tcaggctggagtgcaatggggc------------------------------------------- s panTro5.chr16 21520637 44 - 81586097 agacgcagtttcactcttgttg-tcaggctggagtgcaatggggc------------------------------------------- i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581732 44 - 90481686 agacgcagtttcactcttgttg-tcaggctggagtgcaatggggc------------------------------------------- i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815284 44 + 3010529 agacacagtttcactcttgttg-tcaggctggagtgcaatggggc------------------------------------------- i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934432 44 + 163208435 agacagagtttcactcttattg-ccaggctagagtgcaatggcgc------------------------------------------- i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21114513 45 - 78541002 agacagaatttcggtctttttgcccaggctagagtacaatggtat------------------------------------------- i macFas5.chr20 C 0 I 40 s cerAty1.NW_011999143v1 20834174 44 + 43916225 agacagagttttactcttgttg-ccaggctggagggcaatggtgc------------------------------------------- i cerAty1.NW_011999143v1 C 0 I 40 s calJac3.chr20 21575511 88 - 44557958 atacggagtttgagtcttgttgcccaggctggagtgcaatggcactaactgggctcaccacaacctccatctcccaggaggttcaagt i calJac3.chr20 I 4 C 0 s saiBol1.JH378225 6387688 88 + 6628207 agatggagtttcagtcttgttgtccaggctggagtgcaatggcactaactgggctcaccaaaacctccatctcccaggaggttcaagt i saiBol1.JH378225 I 1305 C 0 s aotNan1.NW_018500622v1 9322564 88 - 10531588 agatggagtttgagtcttgttgcccaggctggagtgcaatgacactaactgggctcaccacaacctccatctcccaggaggttcacat i aotNan1.NW_018500622v1 I 9 C 0 e canFam3.chr5 80500714 253 + 88915250 I e mm10.chr8 22499434 79 - 129401213 I e dasNov3.JH569970 984064 70 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I e macNem1.NW_012011355v1 14510873 1929 + 26466322 I e rheMac8.chr20 21399747 1940 - 74971481 I e colAng1.NW_012123265v1 578942 1900 + 3907144 I e manLeu1.NW_012101698v1 6830092 1907 - 7209941 I e chlSab2.chr5 58263524 2223 + 75399963 I a score=1301490.000000 s hg38.chr16_GL383557v1_alt 89194 161 + 89672 gattctcctgcctcagcttcctgagttgatgggaatacaggcatgcaccaccac-cccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctggtcttgaactcccgacctcaggtgatccacccacctcggcctcccaaagtg s panTro5.chr16 21520681 161 - 81586097 gattctcccgcctcagcttcctgagttgatgggaatacaggcatgcgccaccac-cccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctggtcttgaactcccgacctcaggtgatccacccacctcggcctcccaaagtg i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581776 161 - 90481686 gattctcccgcctcagcttcctgagttgatgggaatacaggcatgcgccaccac-cccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctggtcttgaactcccgacctcaggtgatccacccacctcggcctcccaaagtg i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815328 161 + 3010529 gattctcctgcctcagcttcctgagttgatgggaatacaggcatgcaccaccaa-cccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctggtcttgaactcccgacctcaggtgatccacccacctcggcctcccaaagtg i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934476 160 + 163208435 gattctcctgcctcagcctcctgagtagatgggattacaggcatgtaccaccac-cccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctggtcttgaacttccaacctcaggtgatcca-ccacctcagcctcccaaagtg i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21401687 161 - 74971481 gattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-tccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtaatccacctgcctcagcctcctgaagtg i rheMac8.chr20 I 1940 C 0 s macFas5.chr20 21114598 161 - 78541002 gattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-tccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtaatccacctgcctcagcctcctgaagtg i macFas5.chr20 I 40 C 0 s macNem1.NW_012011355v1 14512802 161 + 26466322 gattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-tctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtaatccacctgcctcagcctcctgaagtg i macNem1.NW_012011355v1 I 1929 C 0 s cerAty1.NW_011999143v1 20834258 162 + 43916225 gatattcctgcctcagcctcctgagtagctgggattacagacatgggccaccatgcctggctaattttgtatttttagtagagacagggcttctccatgttggtcaggctggtctcgaactcctgacctcaggtaatccacccgcctcagcctcctgaagtg i cerAty1.NW_011999143v1 I 40 C 0 s chlSab2.chr5 58265747 161 + 75399963 gattctcctgcctcagcctcctgagtagctgggattacaggcatgcgccaccac-tccggctaattttgtatttttagtagagattgggtttctccatgttggtcaggctggtcttgaactcctgacctcaggtaatccacccacctcggcctcctgaagtg i chlSab2.chr5 I 2223 C 0 s manLeu1.NW_012101698v1 6831999 161 - 7209941 gattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccac-tccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggttggtcttgaactcctgacctcaggtaatccacccgcctcagcctcctgaagtg i manLeu1.NW_012101698v1 I 1907 C 0 s colAng1.NW_012123265v1 580842 161 + 3907144 gattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccac-cccggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaagtaatccacccgcctcagcctcccaaagtg i colAng1.NW_012123265v1 I 1900 C 0 s calJac3.chr20 21575599 162 - 44557958 gattctcctgcctcagcctcctgagtagctgggattacaggtacgcaccacaatgcctggctaattttgtccttttagtagagacagggtttctccatattggtcaggctggtctcaaactcccgatctcagatgatctgcctgcctcgacctcccaaagtg i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6387776 126 + 6628207 gattctcctgcctcatcctcccgagtagctgggattacaggcttgcgccacaatgcctagctaattttgtccttttagtagagaca-ggtttctccatgttggtcaggctggt-----------------------------------ggcctcccaaagtg i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9322652 162 - 10531588 gattctcctgcctcatcctcccgcgtagctgggattacaggcatgttccacaatgcccggctaattttgtccttttagtagagacagggtttctccatgttggtcaggctggtctcaaactcccgatctcagatgatctgcctgcctcggcctcccaaagtg i aotNan1.NW_018500622v1 C 0 C 0 e canFam3.chr5 80500714 253 + 88915250 I e mm10.chr8 22499434 79 - 129401213 I e dasNov3.JH569970 984064 70 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I a score=252629.000000 s hg38.chr16_GL383557v1_alt 89355 32 + 89672 ctgggattacaggcatgagccaccgcgcccag s panTro5.chr16 21520842 32 - 81586097 ctgggattacaggcatgagccaccgcgcccag i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581937 32 - 90481686 ctgggattacaggcatgagccaccgcgcccag i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815489 32 + 3010529 ctgggattacaggcatgagccaccgcgcccaa i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934636 32 + 163208435 ctaggattacaggtgtgagccaccatgcccaa i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21401848 32 - 74971481 ctgggattacaggcgtaagccaccacgcccag i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21114759 32 - 78541002 ctgggattacaggcgtgagccaccacgcccag i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14512963 32 + 26466322 ctgggattacaggcgtaagccaccacgcccag i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834420 32 + 43916225 ctgggattacaggcgtaagccaccacgcccag i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58265908 32 + 75399963 ctgggattacaggcgtaagccaccgagcccgg i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832160 32 - 7209941 ctgggattgcaggcgtaagccaccacgcccag i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581003 32 + 3907144 ctgggattacaggcgtgagccaccacgcccag i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21575761 32 - 44557958 ctgggatgacaggcgtaagccactgagcccgt i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6387902 32 + 6628207 ctgggatgacaggcataaaccacctagcccgg i saiBol1.JH378225 C 0 C 0 s aotNan1.NW_018500622v1 9322814 32 - 10531588 ctgggatgacaggcgtaagccaccaagccagg i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80500967 32 + 88915250 cttaaaaaaaaGAAAAGAAAAACGAGACAAAC i canFam3.chr5 I 253 C 0 e mm10.chr8 22499434 79 - 129401213 I e dasNov3.JH569970 984064 70 + 1009443 I e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I a score=24678.000000 s hg38.chr16_GL383557v1_alt 89387 2 + 89672 cc s panTro5.chr16 21520874 2 - 81586097 cc i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581969 2 - 90481686 cc i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815521 2 + 3010529 cc i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934668 2 + 163208435 cc i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21401880 2 - 74971481 cc i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21114791 2 - 78541002 cc i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14512995 2 + 26466322 cc i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834452 2 + 43916225 cc i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58265940 2 + 75399963 cc i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832192 2 - 7209941 cc i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581035 2 + 3907144 cc i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21575793 2 - 44557958 cc i calJac3.chr20 C 0 I 67 s saiBol1.JH378225 6387934 2 + 6628207 cc i saiBol1.JH378225 C 0 I 75 s aotNan1.NW_018500622v1 9322846 2 - 10531588 cc i aotNan1.NW_018500622v1 C 0 I 76 s mm10.chr8 22499513 2 - 129401213 CT i mm10.chr8 I 79 C 0 s canFam3.chr5 80500999 2 + 88915250 CT i canFam3.chr5 C 0 C 0 s dasNov3.JH569970 984134 2 + 1009443 CT i dasNov3.JH569970 I 70 C 0 e cebCap1.NW_016107433v1 3374742 2130 - 5917169 I a score=1451475.000000 s hg38.chr16_GL383557v1_alt 89389 118 + 89672 AACCTGTTTTATCTCTGCAT-CTCAGACGGAAATACAGACATGTCCACCTAACAAGTTGAGATCAACCCTATCAATGAAGGATTCTATGAAGCCAATTTTCCAGGCCAAGAACAGAAAA s panTro5.chr16 21520876 118 - 81586097 AACCTGTTTTATCTCTGCAT-CTCAGACGGAAATACAGACATGTCCACCTAACAAGTTGAGATCAACCCTATCAATGAAGGATTCTATGAAGCCAATTTTCCAGGCCAAGAACAGAAAA i panTro5.chr16 C 0 C 0 s panPan2.chr16 21581971 118 - 90481686 AACCTGTTTTATCTCTGCAT-CTCAGACGGAAATACAGACATGTCCACCTAACAAGTTGAGATCAACCCTATCAATGAAGGATTCTATGAAGCCAATTTTCCAGGCCAAGAACAGAAAA i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815523 118 + 3010529 AACCTGTTTTATCTCTGCAT-CTCAGACGGAAATACAGACATGTCCACCTAACAAGTTGAGATCAACCCTATCAATGAAGGATTCTATGAAGCCAATTTTCCAGGCCAAGAACAGAAAA i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934670 118 + 163208435 AACCTGTTTTATCTCTGTAT-CTCAGACGGAAGTACAGACATGTCCACCTAACAAGTTGAGATCAACCCCATCAATGAAGGATTCTATGAAGCCAATTTTCCAGGCCAAGAACAGAAAA i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21401882 118 - 74971481 AATCTGTTTTATCTCTGTAT-CTCAGACGGAAGTACAGACATGTCCACCAAACAAGTTGAGATCAACCCCATCAGTGAAGGATTCTACGAAGCCAATTTTCCAGGTCAAGAACAGAAAA i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21114793 118 - 78541002 AATCTGTTTTATCTCTGTAT-CTCAGACGGAAGTACAGACATGTCCACCAAACAAGTTGAGATCAACCCCATCAATGAAGGATTCTACGAAGCCAATTTTCCAGGTCAAGAACAGAAAA i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14512997 118 + 26466322 AATCTGTTTTATCTCTGTAT-CTCAGACGGAAGTACAGACATGTCCACCAAACAAGGTGAGATCAACCCCATCAATGAAGGATTCTACGAAGCCAATTTTCCAGGTCAAGAACAGAAAA i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834454 118 + 43916225 AATCTGTTTTATCTCTGTAT-CTCAGACGGAAGTACAGACATGTCCACCAAACAAGTTGAGATCAACCCCATCAATGAAGGATTCTACGAAGCCAATTTTCCAGGTCAAGAACAGAAAA i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58265942 118 + 75399963 AATCTATTTTATCTCTGTAT-CTCAGACGGAAGTACAGACATGTCCACCAAACAAGTTGAGATCAACCCCATCAATGAAGGATTCTATGAAGCCAATTTTCCAGGTCAAGAACAGAAAA i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832194 118 - 7209941 AATCTGTTTTATCTCTGTAT-CTCAGACGGAAGTATAGACATGTCCACCAAACAAGTTGAGATCAACCCCATCAATGAAGGATTCTACGAAGCCAATTTTCCAGGTCAAGAACAGAAAA i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581037 118 + 3907144 AACCTGTTTTATCTCTGTAT-CTCAGACAGAAGTACAGACATGTCCACCAAACAAGTTGAGATCAACCCCATCAATGAAGGATTCTATGAAGCCTATTTTCCAGGTCAAGAACAGAAAA i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21575862 117 - 44557958 AACCTGTTTCATCTCGGTAT-CACAGATGAAAGT-CAAACATGTCCATCTAACAAGTTGAGATCAATCCCACCAATGAAGGATTCTATTAAGCCAATTTTCCAGGCCAAAAACAGAAAA i calJac3.chr20 I 67 C 0 s saiBol1.JH378225 6388011 117 + 6628207 TACCTGTTTCATCTCTGTAT-CTCAGATGAAAGT-CAGACATGTCCACCTAACAAGTTGAGATCAATCCCACCAATGAAGGATTCTATTAAGCCAATTTTCCAGGCCAAAAACAGAAAA i saiBol1.JH378225 I 75 C 0 s cebCap1.NW_016107433v1 3376872 117 - 5917169 AACCTGTTTCATCTCTGTAT-CTCAGTTGAAAGT-CAGACATGTCCACCTACCAAGTTGAGATCAATCCCACCAATGAAGGATTCTACTAAGCCAATTTTCCAGGCCAAAAACAGAAAA i cebCap1.NW_016107433v1 I 2130 C 0 s aotNan1.NW_018500622v1 9322924 117 - 10531588 AACCTGTTTCATCTCTGTAT-CTCAGATGAAAGT-CAGACATGTCCACCTAACAAGTTGAGATCAATTCCACCAATGAAGGATTCTATTAAGCCAATTTTCCAGGCCAAAAACAGAAAA i aotNan1.NW_018500622v1 I 76 C 0 s mm10.chr8 22499515 113 - 129401213 GACCCATTTTGTCTCTGTAT-CT----TGCATGTATAAATATGCTAATCTAACAAGTTAGAGGCAAGCTCA-CACTAAAGGTGTCTAATAGCCCAATTTTCCAGGCCAAGAACAGAAAA i mm10.chr8 C 0 N 0 s canFam3.chr5 80501001 116 + 88915250 GACCTGTTTTACTTCC-CAT-CTTAGATGGGAGTATAGAGGGGCCCACCTAACAAGTCGAAGTCAGTCTCATCACTGAAGGATTCCAT-AAGCCAATTCTGTATGCCAAGAATAGAGAA i canFam3.chr5 C 0 I 2 s dasNov3.JH569970 984136 118 + 1009443 GACCCGTTTTACTTCCATATGCTTAGATGGGAGTAAAGACACACCCACCAAATAAGTTGAAGTGAACCTCATCACTGAAGGATTCCATTA-GCCAATTCTCCATGCCAAGAACAGAGAA i dasNov3.JH569970 C 0 C 0 a score=1250342.000000 s hg38.chr16_GL383557v1_alt 89507 106 + 89672 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACAAAAATCTTATGTTCCTCAATGACAGAAGCCCATTTTTACCAAGGACTGGGATCTAT s panTro5.chr16 21520994 106 - 81586097 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACAAAAATCTTATGTTCCTCAATGACAGAAGCCCATTTTTACCAAGGACTGGGATCTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21582089 106 - 90481686 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACAAAAATCTTATGTTCCTCAATGACAGAAGCCCATTTTTACCAAGGACTGGGATCTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815641 106 + 3010529 ---TATCGTGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACAAAAATCTTATGTTCCTCAATGACAAAAGCCCATTTTTACCAAGGACTGGGATCTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934788 106 + 163208435 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTATGAAAATCTTATGTTCCTCAATGACAGAAGCCCATTTTTACCAAGGACTGGGATCTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21402000 103 - 74971481 ---T---ATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACGAAGACCTTATGTTCCTCAATGACAGAAACCCATTTTTACCAAGGACTGGGATCTGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21114911 106 - 78541002 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACGAAGACCTTATGTTCCTCAATGACAGAAACCCATTTTTACCAAGGACTGGGATCTGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14513115 106 + 26466322 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACGAAGACCTTATGTTCCTCAATGACAGAAACCCATTTTTACCAAGGACTGGGATCTGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834572 106 + 43916225 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACGAAGACCTTATGTTCCTCAATGACAGAAACCCATTTTTACCAAGGACTGGGATCTGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58266060 106 + 75399963 ---TATCATGGTTCTCTGCTTTTCTGATGTCATGTTTCACCAA-TTATGCTACGAAGACCTTATGTTCCTCAATGACAGAAATCCATTTTTACCAAGGACTGGGATCTGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832312 106 - 7209941 ---TATCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTACGAAGACCTTATGTTCCTCAATGACAGAAACCCATTTTTACCAAGGACTGGGATCTGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581155 106 + 3907144 ---TACCATGGTTCTCTGCTTTTCTGATCTCATGTTTCACCAA-TTATGCTATGAAGACCTTACGTTCCTTAATGACAGAAACCCATTTTTACCAGGGACTGGGATCCGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21575979 104 - 44557958 ---TGTCATGGTTCTCTACTTTTCTGATCTTAGGTTTCACCAA-TTATGCTACAAAGATCTTATGTTCTCCAATGAC--AAGCCCATTTTTACCAAGGACTGGGATCTAT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6388128 106 + 6628207 ---TGTCATGGTTCTCTACTTTTCTGATCTTATGTTTCACCAA-TTATGCTACAAAGATCTTATGTTCCCCAATGACAGAAGCCCATCTTTACCAAGGACTGGGACCTAT i saiBol1.JH378225 C 0 C 0 s cebCap1.NW_016107433v1 3376989 106 - 5917169 ---TGTTATGGTTCTCTACTTTTCTGATCTTATGTTTCACCAA-TTATGATACAAAGATCTTATGTTTCCCAATGACAGAAGCCCATTTTTACCAAGGACTGGGACCTAT i cebCap1.NW_016107433v1 C 0 N 0 s aotNan1.NW_018500622v1 9323041 106 - 10531588 ---TGTCATGGTTCTCTACTTCTCTGATCTTATGTTTCACCAA-TTATGCTACAAAAATCTTATGTTCCCCAATGACAGAAGCCCATTTTCACCAAGGACTGGGATCTAT i aotNan1.NW_018500622v1 C 0 C 0 s canFam3.chr5 80501119 106 + 88915250 ---GGAGATGGTTCTCTACCTTTCTGATCTCATACCTCACCAA-TTATGCTACCAAGACCTTATGCTTCTCAAAGAGAGACATCTACTTTTACCAAGGTCCGGTATATAT i canFam3.chr5 I 2 I 1 s dasNov3.JH569970 984254 108 + 1009443 AAGTAT-GTGGTTCTCTATCTTTCTCACCTCATGTCTCACCAATTTATGTTATCACAATCTTAAGTTCCTCAAT-ACAGAAGCTCACTTTTGCTAAGGACTATGATATAC i dasNov3.JH569970 C 0 C 0 a score=73924.000000 s hg38.chr16_GL383557v1_alt 89613 8 + 89672 AAATAGGT s panTro5.chr16 21521100 8 - 81586097 AAATAGGT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21582195 8 - 90481686 AAATAGGT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815747 8 + 3010529 AAATAGGT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934894 8 + 163208435 AAATAGGT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21402103 8 - 74971481 ACATAGGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21115017 8 - 78541002 ACATAGGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14513221 8 + 26466322 ACATAGGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834678 8 + 43916225 ACATAGGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58266166 8 + 75399963 ACATAGGT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832418 8 - 7209941 ACATAGGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581261 8 + 3907144 AAATAGGT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21576083 8 - 44557958 AAATAGGT i calJac3.chr20 C 0 I 14 s saiBol1.JH378225 6388234 8 + 6628207 TTATAGAT i saiBol1.JH378225 C 0 I 14 s aotNan1.NW_018500622v1 9323147 8 - 10531588 AAATAGGT i aotNan1.NW_018500622v1 C 0 N 0 s canFam3.chr5 80501226 8 + 88915250 AAATAGTT i canFam3.chr5 I 1 C 0 s dasNov3.JH569970 984362 8 + 1009443 AAGTAGAT i dasNov3.JH569970 C 0 C 0 a score=9555.000000 s hg38.chr16_GL383557v1_alt 89621 1 + 89672 A s panTro5.chr16 21521108 1 - 81586097 A i panTro5.chr16 C 0 C 0 s panPan2.chr16 21582203 1 - 90481686 A i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815755 1 + 3010529 A i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934902 1 + 163208435 A i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21402111 1 - 74971481 A i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21115025 1 - 78541002 A i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14513229 1 + 26466322 A i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834686 1 + 43916225 A i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58266174 1 + 75399963 A i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832426 1 - 7209941 A i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581269 1 + 3907144 A i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21576105 1 - 44557958 A i calJac3.chr20 I 14 C 0 s saiBol1.JH378225 6388256 1 + 6628207 A i saiBol1.JH378225 I 14 C 0 s dasNov3.JH569970 984370 1 + 1009443 A i dasNov3.JH569970 C 0 N 0 e canFam3.chr5 80501234 0 + 88915250 C a score=109128.000000 s hg38.chr16_GL383557v1_alt 89622 14 + 89672 ATTCT-ACTGTTTAT s panTro5.chr16 21521109 14 - 81586097 ATTCT-ACTGTTTAT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21582204 14 - 90481686 ATTCT-ACTGTTTAT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815756 14 + 3010529 ATTCT-ACTGTTTAT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934903 14 + 163208435 ATTCT-ACTGTTTAT i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21402112 14 - 74971481 ATTCT-ACTGTTCGT i rheMac8.chr20 C 0 C 0 s macFas5.chr20 21115026 14 - 78541002 ATTCT-ACTGTTCGT i macFas5.chr20 C 0 C 0 s macNem1.NW_012011355v1 14513230 14 + 26466322 ATTCT-ACTGTTCGT i macNem1.NW_012011355v1 C 0 C 0 s cerAty1.NW_011999143v1 20834687 14 + 43916225 ATTCT-ACTGTTCGT i cerAty1.NW_011999143v1 C 0 C 0 s chlSab2.chr5 58266175 14 + 75399963 ATTCT-ACTGTTCAT i chlSab2.chr5 C 0 C 0 s manLeu1.NW_012101698v1 6832427 14 - 7209941 ATTCT-ACTGTTTGT i manLeu1.NW_012101698v1 C 0 C 0 s colAng1.NW_012123265v1 581270 14 + 3907144 ATTCT-ACTGTTCAT i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21576106 14 - 44557958 ATTCT-ACTGTTCAC i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6388257 14 + 6628207 ATTCT-ACTCTTCAC i saiBol1.JH378225 C 0 C 0 s canFam3.chr5 80501234 15 + 88915250 ATTCTAACTGGTCAT i canFam3.chr5 C 0 N 0 a score=87893.000000 s hg38.chr16_GL383557v1_alt 89636 12 + 89672 AGTACACGAATG s panTro5.chr16 21521123 12 - 81586097 AGTACACGAATG i panTro5.chr16 C 0 C 0 s panPan2.chr16 21582218 12 - 90481686 AGTACACGAATG i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815770 12 + 3010529 AGTACACAAATG i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934917 12 + 163208435 AGTACACGAATG i nomLeu3.chr2 C 0 C 0 s rheMac8.chr20 21402126 12 - 74971481 AGTACATGAATG i rheMac8.chr20 C 0 N 0 s macFas5.chr20 21115040 12 - 78541002 AGTACATGAATG i macFas5.chr20 C 0 I 15 s macNem1.NW_012011355v1 14513244 12 + 26466322 AGTACATGAATG i macNem1.NW_012011355v1 C 0 N 0 s cerAty1.NW_011999143v1 20834701 12 + 43916225 AGTACATGAATG i cerAty1.NW_011999143v1 C 0 N 0 s chlSab2.chr5 58266189 12 + 75399963 AGTACATGAATG i chlSab2.chr5 C 0 N 0 s manLeu1.NW_012101698v1 6832441 12 - 7209941 AGTACATGAATG i manLeu1.NW_012101698v1 C 0 N 0 s colAng1.NW_012123265v1 581284 12 + 3907144 AGTACATGAATG i colAng1.NW_012123265v1 C 0 C 0 s calJac3.chr20 21576120 12 - 44557958 AGTACATGAATG i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6388271 12 + 6628207 AGTATGTTAATA i saiBol1.JH378225 C 0 C 0 a score=11585.000000 s hg38.chr16_GL383557v1_alt 89648 4 + 89672 TACT s panTro5.chr16 21521135 4 - 81586097 TACT i panTro5.chr16 C 0 C 0 s panPan2.chr16 21582230 4 - 90481686 TACT i panPan2.chr16 C 0 C 0 s gorGor5.CYUI01000018v1 815782 4 + 3010529 TACT i gorGor5.CYUI01000018v1 C 0 C 0 s nomLeu3.chr2 53934929 4 + 163208435 TACT i nomLeu3.chr2 C 0 C 0 s macFas5.chr20 21115067 4 - 78541002 TACT i macFas5.chr20 I 15 C 0 s colAng1.NW_012123265v1 581296 4 + 3907144 TACT i colAng1.NW_012123265v1 C 0 N 0 s calJac3.chr20 21576132 4 - 44557958 TATT i calJac3.chr20 C 0 C 0 s saiBol1.JH378225 6388283 4 + 6628207 TATT i saiBol1.JH378225 C 0 C 0 a score=37812.000000 s hg38.chr16_GL383557v1_alt 89652 20 + 89672 ---AGTT--CAGAGTATTTTATTGT s panTro5.chr16 21521139 20 - 81586097 ---AGTT--CAGAGTATTTTATTGT i panTro5.chr16 C 0 N 0 s panPan2.chr16 21582234 20 - 90481686 ---AGTT--CAGAGTATTTTATTGT i panPan2.chr16 C 0 N 0 s gorGor5.CYUI01000018v1 815786 20 + 3010529 ---AGTT--CAGAGTATTTTATTGT i gorGor5.CYUI01000018v1 C 0 N 0 s nomLeu3.chr2 53934933 20 + 163208435 ---AGTT--CAGAGTATTTTATTGT i nomLeu3.chr2 C 0 N 0 s macFas5.chr20 21115071 20 - 78541002 ---AGTT--AAGATAATTTTATTGT i macFas5.chr20 C 0 N 0 s calJac3.chr20 21576136 25 - 44557958 AGTAGTTGGGAGAGAATTTTATTGT i calJac3.chr20 C 0 N 0 s saiBol1.JH378225 6388287 25 + 6628207 AGTAGTTGGGAGAGAATTTTATTGT i saiBol1.JH378225 C 0 N 0