##maf version=1 scoring=roast.v3.3 a score=9100.000000 s hg38.chr17_JH159148v1_alt 0 1 + 88070 c s panTro5.chr17 16322181 1 + 83181570 c i panTro5.chr17 N 0 C 0 s panPan2.chr17 16227056 1 + 83442489 c i panPan2.chr17 N 0 C 0 s gorGor5.CYUI01015385v1 4062193 1 + 4267968 c i gorGor5.CYUI01015385v1 N 0 C 0 s nomLeu3.chrUn_GL397460_1 2042455 1 - 2193130 c i nomLeu3.chrUn_GL397460_1 N 0 C 0 s rheMac8.chr16 30116488 1 - 77216781 c i rheMac8.chr16 N 0 C 0 s macFas5.chr16 28029350 1 - 80997621 c i macFas5.chr16 N 0 C 0 s macNem1.NW_012014910v1 2085595 1 + 10377808 c i macNem1.NW_012014910v1 N 0 C 0 s cerAty1.NW_012006043v1 1971353 1 - 8458610 c i cerAty1.NW_012006043v1 N 0 C 0 s chlSab2.chr16 64915592 1 + 75148670 c i chlSab2.chr16 N 0 C 0 s colAng1.NW_012122154v1 2178651 1 + 4569836 c i colAng1.NW_012122154v1 N 0 C 0 s calJac3.chr5 46134593 1 - 159171411 c i calJac3.chr5 N 0 C 0 s saiBol1.JH378271 1844233 1 + 3513951 c i saiBol1.JH378271 N 0 C 0 s otoGar3.GL873537 22837085 1 + 28711273 c i otoGar3.GL873537 N 0 C 0 a score=61920.000000 s hg38.chr17_JH159148v1_alt 1 8 + 88070 aagaaact s panTro5.chr17 16322182 8 + 83181570 aagaaact i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227057 8 + 83442489 aagaaact i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062194 8 + 4267968 aagaaact i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2042456 8 - 2193130 aagaagct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30116489 8 - 77216781 aagaagct i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029351 8 - 80997621 aagaagct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2085596 8 + 10377808 aagaagct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971354 8 - 8458610 aagaagct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64915593 8 + 75148670 aagaagct i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2178652 8 + 4569836 aagaagcg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46134594 8 - 159171411 aagaagct i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844234 8 + 3513951 aagaagct i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22837086 8 + 28711273 aaggagct i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 453430 8 - 852752 AAGGATAT i dasNov3.JH570468 N 0 C 0 a score=77163.000000 s hg38.chr17_JH159148v1_alt 9 8 + 88070 cactctct s panTro5.chr17 16322190 8 + 83181570 cactctct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227065 8 + 83442489 cactctct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062202 8 + 4267968 cactctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2042464 8 - 2193130 cactctct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30116497 8 - 77216781 cactctct i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029359 8 - 80997621 cactctct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2085604 8 + 10377808 cactctct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971362 8 - 8458610 cactctct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64915601 8 + 75148670 cactctct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2155670 8 + 4244037 cactctct i manLeu1.NW_012106252v1 N 0 C 0 s colAng1.NW_012122154v1 2178660 8 + 4569836 cactcttt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46134602 8 - 159171411 tactctct i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844242 8 + 3513951 cactctct i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22837094 8 + 28711273 cattctct i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 453438 8 - 852752 GATTTTTT i dasNov3.JH570468 C 0 C 0 a score=186133.000000 s hg38.chr17_JH159148v1_alt 17 29 + 88070 ggtgggcag---------caagacaattatgacattcc s panTro5.chr17 16322198 29 + 83181570 ggtgggcag---------caagacaattatgacattcc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227073 29 + 83442489 ggtgggcag---------caagacaattatgacattcc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062210 29 + 4267968 ggtgggcag---------caagacaattatgacattcc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2042472 29 - 2193130 ggtgggcag---------caagacaattatgacattcc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30116505 29 - 77216781 ggtgggcag---------caagacaattatgacattcc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029367 29 - 80997621 ggtgggcag---------caagacaattatgacattcc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2085612 29 + 10377808 ggtgggcag---------caagacaattatgacattcc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971370 29 - 8458610 ggtgggcag---------caagacaattatgacattcc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64915609 29 + 75148670 ggtgggcag---------caagacaattatgatattcc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2155678 29 + 4244037 ggtgggcag---------caagacaattatgacattcc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2178668 29 + 4569836 ggtgggcag---------caagacaattatgacattcc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46134610 8 - 159171411 gatgagCT------------------------------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844250 8 + 3513951 ggtgagct------------------------------ i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22837102 38 + 28711273 ggtggagagacagacagactggacaattattacattcc i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21450056 29 + 61074082 gataggcag---------agagacagtaactacattgc i canFam3.chr9 N 0 C 0 s dasNov3.JH570468 453446 20 - 852752 ------------------GGTGGCAATTGTTACATTCC i dasNov3.JH570468 C 0 C 0 a score=1218345.000000 s hg38.chr17_JH159148v1_alt 46 99 + 88070 tttgtgccaagtac----t----tggag---ataagcatagagc-accatgaactcagcagagcatagttggggaacaaggaaagaattatt-ggagaatgtgatactggca s panTro5.chr17 16322227 99 + 83181570 tttgtgccaagtac----t----tggag---ataagcatagagc-accatgaactcagcagagcatagtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227102 99 + 83442489 tttgtgccaagtac----t----tggag---ataagcatagagc-accatgaactcagcagagcatagtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062239 100 + 4267968 tttgtgccaagtac----t----tggag---ataagcatagagc-accatgaactcagcagagcatagtgggggaacaaggaaagaattattgggagaatgtgatactggca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2042501 99 - 2193130 tttgtgccaagtac----t----cagag---ataagcacagagc-accatgaactcagcagagcatggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30116534 99 - 77216781 tttgtgccaagtac----t----cggag---ataagcacagagc-accatgaaatcagcagagcgtggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029396 99 - 80997621 tttgtgccaagtac----t----cggag---ataagcacagagc-accatgaaatcagcagagcgtggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2085641 99 + 10377808 tttgtgccaagtac----t----cggag---ataagcacagagc-accatgaactcagcagagcgtggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971399 99 - 8458610 tttgtgccaagtac----t----cggag---ataagcacagagc-accatgaactcagcagagcatggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64915638 99 + 75148670 tttgtgccaagtac----t----cggag---ataagcacagagc-accatgaactcagtaaagcgtggtggggaaacaaggaaagaattatt-ggagaatgtgatactggca i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2155707 99 + 4244037 tttgtgccaagtac----t----cggag---ataagcacagagc-accatgaactcagcagaacgtggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2178697 99 + 4569836 tttgtgccaagtac----t----cagag---ataagcacagagc-actatgaactcagcagagtgtggtgggggaacaaggaaagaattatt-ggagaatgtgatactggca i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46134618 100 - 159171411 TTTGTGCCGAGCAC----T----TGGAG---ATAAACACAGAGCACCCATGAACTCAGCAGAGTGTGGtgggggaacaaggaaataattctt-ggagaatgtgatactggca i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844258 99 + 3513951 tttgtgcagagtac----t----tggag---ataagcacagagc-cccatgaactcagcagagtatggtgggggaacaaggaaagaattctt-ggagaatgtgatactggca i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1893008 102 + 1920343 TTTGTGCCGAGTAC----T----TGGAGGTCATAAGCACAGAGC-ACCATGAACTCAGCAGAGTGTGGtgggggaacaaggaaagaattctt-ggagaatgtgatgctggca i cebCap1.NW_016107730v1 N 0 C 0 s aotNan1.NW_018502359v1 7009347 99 - 7032639 tttgtgccgagtac----t----tggag---ataagcacagagg-accatgaactcagcagagtgtggtgggtgaacaaggaaagaattctt-ggagaatgtgatactggca i aotNan1.NW_018502359v1 N 0 C 0 s otoGar3.GL873537 22837140 100 + 28711273 catgtgctaagcaccaggt----aagag---gtaagcatagggc-accatgaactcagcagggtgtag-gtaggaaccaggaaagaat--ct-tgtgaatgtgattctggag i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21450085 101 + 61074082 cttgtgttaagtac----tgggacagag---gcaagcatagggc-agtttgaactgagcagggcatg--tggagaaatggggaagaattctt-ggggaatgtgatactgaag i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 453466 99 - 852752 ATTatggtaagtat----tggaatagag---gtaagcacagagt-accatgaactcaggagggcatag---gggaacca-gaaagaattctt-ggggaatatgattgatgca i dasNov3.JH570468 C 0 C 0 a score=5166222.000000 s hg38.chr17_JH159148v1_alt 145 419 + 88070 ----tcgagtctttcagtatgagtaggaattaaccagttacaaacaggaaaggaaaaactttctaggcaaaggagacttgtacaagtgaatggggcttgaggGCAAATTGTTCATTAGGTGAGGCATGGG-AGAGTTGTTCTTTGAGGA---A---TGAGCCATGAGGTCAGGT-CGTAGACAGTGATC-----TGTCTATGTGGGGTCTTGCATGCTAGACAGAGGTATTTCGGTTTGATGCAGGGCTGACATGAAAGCATCAAGGGGCTGCATGCAA---GGAGGTGACAGGAAGAGCACTGG-TTTTGGAACATCCCTCTGGCCTTGGTTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGACTGGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACA--GGA---AGAAAAACAAGTGGGGATCA s panTro5.chr17 16322326 420 + 83181570 ----tcgagtctttcagtatgagtaggaattaaccagttacaaacaggaaaggaaaaactttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCATGGG-AGAGTTGTTCTTTGAGGA---A---TGAGCCATGAGGTCAGGT-CGTAGACAGTGATC-----TGTCTATGTTGGGTCTTGCATGCTAGACAGAGGTGTTTCGGTTTGATGCAGGGCTGACACGAAAGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATCCCTCTGGCCTTGGTTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGACTGGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACA--GGA---AGAAAAACAAGTGGGGATCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227201 420 + 83442489 ----tcgagtctttcagtatgagtaggaattaaccagttacaaacaggaaaggaaaaactttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCATGGG-AGAGTTGTTCTTTGAGGA---A---TGAGCCATGAGGTCAGGT-CGTAGACAGTGATC-----TGTCTATGTTGGGTCTTGCATGCTAGACAGAGGTGTTTCGGTTTGATGCAGGGCTGACACGAAAGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATCCCTCTGGCCTTGGTTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGACTGGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACA--GGA---AGAAAAACAAGTGGGGATCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062339 421 + 4267968 ----tcgagtctttcagtatgagtaggaattaaccagttacaaacaggaaaggaaaaactttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCATGGG-AGAGTTGTTCTTTGAGGA---A---TAAGCCATGAGGTCAGGT-CGTAGACAGTGATC-----TGTCTATGTTGGGTCTTGCATGCTAGACAGAGGTGTTTCGGTTTGATGCAGGGCTGACACGAAAGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATCCCTCTGGCCTTGGTTGGTGTGGAGAAACTCAATGGAAGAACATGGTTCTGGATATAGAGAGACTGGGGAGGAAAGGAAGCCAGTTGTTTTTG-GGTCCACA--GGA---AGAAAAACAAGTGGGGATCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2042600 423 - 2193130 ----tcgagcctttcagtacgagtaggaattaactagttacaaacaggaaaggaaaagctttctaggcaaaggagacatgtacaagtgaacggggCTTGAGAGCAAATTGTTCATTAGGCGAGGCATGGG-AGAGTTGTTCTTCAAGGA---A---TGAGGCATGAGGTCAGAT-CGTAGACAGTGATCGTAGACAATGATGTTGGGACTGGCATGCTAGACAGAGGTGTTTGGGTTTGATGCAGGGCTGACATGAAGGCATCAGGGGGCTGCATGCAG---AGAGGTAACAGGAAGAGCACTGGGTTTTGGAACATCCCTCTGGTC----TTGGTGTGGAG-AACCCAATGGAAGAGCATGGTTCTGGATATAGAGAGGCTGGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACAGTGGA---AGAAAAACAAGTGGGGATCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30116633 419 - 77216781 ----tcgagtctttcagtacgagcatgaatcaaccagctacaaacaggaaaggaaaagttttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCGTGGGCAGAGTTGTTCTTTGAGGA---A---TGAGCCACGAGGTCAGAT-TGTAGACAGTGATC-----TGTCTATGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGTTGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTAGAACATTCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCCGGGGAGGAAAGAAAGTCAATTGTTTTTG-GGTCCACAGTGGA---AGAAAAATAAGTGGAGATCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029495 419 - 80997621 ----tcgagtctttcagtacgagcatgaatcaaccagctacaaacaggaaaggaaaagttttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCATGGGCAGAGTTGTTCTTTGAGGA---A---TGAGCCACGAGGTCAGAT-TGTAGACAGTGATC-----TGTCTATGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGTTGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATTCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCCAGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACAGTGGA---AGAAAAATAAGTGGAGATCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2085740 419 + 10377808 ----tcgagtctttcagtacgagcatgaatcaaccagctacaaacaggaaaggaaaagttttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCGTGGGCAGAGTTGTTCTTTGAGGA---A---TGAGCCACGAGGTCAGAT-TGTAGACAGTGATC-----TGTCTATGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGTTGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATTCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCCAGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACAGTGGA---AGAAAAATAAGTGGAGATCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971498 419 - 8458610 ----tcgtgtctttcagtacgagcatgaatcaaccagctacaaacaggaaaggaaaagttttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCGTGGGCAGAGTTGTTCTTTGAGGA---A---TGAGCCACGAGGTCAGAT-TGTAGACAGTGATC-----TGTCTATGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGTTGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATTCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCCAGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACAGTGGA---AGAAAAATCAGTGGAGATCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64915737 419 + 75148670 ----tcgagtctttcagtatgagcaggaatcaaccagctacaaataggaaaggagaagttttctaggcaaaggagacaTGTACGAGTGAATAGGGCTTGAGAGTAAATTGTTCATTAGGTGAGGCGTGGACAGAGTTGTTCTTAGAGGA---A---TGAGCCACGAGGTCAGGT-TGTAGACAGTGATC-----TGTCTATGTTGGGCCTTGCATGCTAGACAGAGGTGTCTGGGTTTGATGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAG---GGAGGTGACAGGAAGGGCACCAGGTTTTGGAACATCCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCTGGGGAGGAAAGGAAGCCAATTTTTTTTG-GGTCCACAGTGGA---AGAAAAATAAGTGGAGATCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2155806 419 + 4244037 ----tcgagtctttcagtacgagcatgaatcaaccagctacaaacaggaaaggaaaagttttctaggcaaaggagacatgtacaaGTGAATGGGGCTTGAGAGCAAATTGTTCATTAGGTGAGGCGTAGGCAGAGTTGTTCTTTGAGGA---A---TGAGCCACGAGGTCAGAT-TGTAGACAGTGATC-----TGTCTATGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGTTGCAGGGCTGACATGAAGGCATCAGGGGGCTGCATGCAG---GGAGGTGACAGGAAGAGCACTGGGTTTTGGAACATTCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCCAGGGAGGAAAGGAAGCCAATTGTTTTTG-GGTCCACAGTGGA---AGAAAAATCAGTGGAGATCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2178796 418 + 4569836 ----tcgagtctttcagtacgagcaggaattaaccagctacaaacaggaaaggaaaagttttctaggtaaaggagacacgtataagtgaacagggcttgagagcaAATTGTTCATTAGGTGAGGCGTGGGCAGAGTTGTTCTTCGAGGA---A---TGAGCCACGAGGTCAGAT-TGTAGACAGTGATC-----TG-CTATGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGATGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAG---GGAGGTGACAAGAAGAGCACTGGGTTTTGGAACATCCCTCTGGCC----TTGGTGTGGAG-AACTCAATGGAAGAACATGGTTCTGGATATAGAGAGGCTGGGGAGGAAAGGAAGCCAGTTGTTTTTG-GGTCCACAGTGGA---AGAAAAATAAGTGGACATCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46134718 418 - 159171411 ----ttgagtcttcccatatgagtaggaattaaccagttacaaacaggaaagcaaaagctttctaggcaaaggagacatgtacaagtgaatggggcttgagAGCAAATTTTTCATGAGGTGAGGCATGGACAGACTCGTTCTTAGAGGA---A---TGAGCCATGAGATCAGAT-TGTACATGGGGATC-----TGCCTGTGTTGGGCCTTGCATACTAGACAGAGGTATTCGGGTTTGATGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAGGGGGGAAGTGACAGGAAGAGCACTGGGTTTTGGAAGGTCCCTCTGGCC----TTGGTGTGGAG-AATTCAATGGAAGAACATGGTTCTGGAGATAGAGAGACTGGGGAAGACAGGAAGCCAATCGTTTTGC-CGTCCACAGTGGA---AGAAAAACAAGAAGTG---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844357 418 + 3513951 ----tcaagtcttcccatatgagtaggaattaaccagttacaaacaggaaagcaaaagcttcctaggcaaaggagacatgtacaagtgaatagggcttgagAGCAAATTGTTCATGAGGTGAGGCGTGGACAGAGTCGTTCTTAGAGGA---A---TGAGCCATGCGGTCAGAT-CGTAGACAGTGATC-----TGCCTGTGTTGGGCCTTGCATGCTAGACAGAGGTGTCTGGGTTTGATGCAGGGCTGACATGAAGGCTTCAAGAGGCTGCATGCAGGGTGGAAGTGACAGGAAGAGCACTGGGTTTTGGAAGGTCCCTCTGGCC----TTGGTGTGGAG-AATTCAATTGAAGAACATGGTTCTGGAGATAGAGAGACTGGGGAAGACATGAAGCCGATCGTTTTGC-GGTCCACAGTGGA---AGAAAAACAAGAAGTG---- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1893110 418 + 1920343 ----tcgagtcttcccatatgagtaggaattaaccagttacaaacaggaaagcaaaagctttctaggcagaggagacatgtacaagtgaatggggcttgagAGCAGATTGTTCATGAGGTGAGGCATACACAGAGTCATTCTTAGAGGA---A---TGAGCCATGAGGTCAGAT-CATGGACAGTGGGC-----TGCCTGTGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGCTTGATGCAGGGCTGACATGAAGGCATCAAGGGGCTGCATGCAGAGCGGAAGTGACAGGAAGAGCACTGGGTTTTGGAAGGTCCCTCTGGCC----TTGGTGTGGAG-AATTCAATTGAAGAACATGGTTCTGGAGATAGACAGACTGGGGAAGACAGGAAGCCAATTGTTTTGT-GGTCCACAGTGGA---AGAAGAACAAGAAGTG---- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7009446 418 - 7032639 ----tcgagtcttcccatatgagtaggaattaaccagttacaaacaggaaagcaaaagctttctaggcaaaggagacacgtacaagtaaatggggcttgagagcaAATTGTTCACGAGGTGAGGCGTAGACAGAGTCGTTCTTAGACGA---A---TGAGCCATGAGGTCAGAT-CGTAGACAGTGATC-----TGCCTGTGTTGGGCCTTGCATGCTAGACAGAGGTGTTTGGGTTTGATGCAGGGCTGACAGGAAGGCATCAAGGGGCTGCATGCAGGGGGGAAGTGACAGGAAGAGCACTGGGTTTTGGAAGGTCCCTCTGGCC----TTGGTGTGGAG-AACTCAACTGAAGAACGTGGTTCTGGAGATAGAGAGACAGGGGAAGACAGGAAGCCAATCGTTTTGC-GGTCCACAGTGGA---AGAAAAACAAGAAATG---- i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22837240 410 + 28711273 ----ctgattctttcagcac-agtaggatttaaccatttacaaatagggaaggaagaactttctaggcagagggaacatgaacaaatgagtgaggcttgagagcaaactgttcattaggcaaggcttgagcagagttgcccttagaggattgg---tgggccccaaggtcaaag-agTAGACAGTGACC-----TGCTCAAGTTGGGCCTTACACGCTGGACAGATGGGTTTGCATCTCAGGCAGGGCTGGCACAAAAGCACTAAGGGGCTGTAT--AG---GGCAGTGATGTGAGGAGCACTGGGTGTTGGAACATCCCTCTGGCG----TTGGTGTGGAG-AACTCAGTGGAGGGATATGGTCTTGGATAGAGAGAGACCGGG-----AAGGAAGCCAATGGCTTTGA-GGTCCACAGTGGG---ATGAAAACAGCAAGAG---- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22098944 387 - 122082543 ----TCCAATCCTTTGGTACAAGTAAGAATTAACCAGGT------------------GCTCTCTAGGAAGGAGATTTACAGACAGATGAGCAGGGC-TGGGAGCCAACTGTCCACTAGGTGATGCTTGGGCAGAGGTGTCCTTAGAGGG---AAGGTGAGCCCTGACAGTGGGT-AGCAGGCAATGTTC-----TTCCCACAGAGGGCCTTGTGTGCTAGATAGATG---CTTGGTTTGGTGAAAAGCTTATGTGAAGTCCT-GAGGGGCTATTTGCAG---GGCAGGGTCGTGAAG-GAAATGGGTTTTGAAAAGTCTCTCTGGCC----TTGACATGGAA-AATTCAATGGGAAGACATGGGCCTGGATGTAGAGAAAT-------GGAAGGAAACAAATGTCTCTGGAGGTCAACGATGAA-TGAGAACAACAAATG------- i mm10.chr11 N 0 C 0 s canFam3.chr9 21450186 411 + 61074082 ----ctgagtctttcagcacaaacaagaactaaccagtt-caaaccagaaaggaagagatttccaggcagaggaaacaT--ACAAATGAATGGGGCTTGTGAGCAGACCATTCATTA-GTGAGGCTTGGGTGGAAGTGTGCTTAGAGGG---A-GGTGAGCTCTGGGGTCAGTTAAATAGACAGTGATC-----TGCCCTTGGCGGGGTTTATAAGCTAGACAGAAGCATTTTAA--TGGTACAGGGCTGACATGAAGGTATCGAGGGGCCAAATGCAG---GGCAGTTACAAGAAGAGCAATGGGTTTTGGAATGGTCATCTGGCC----TTGGTGTGGAG-AACTGAATGAAGGAGCATGAACTTGGATATAGGGAGACTGGGG-----AGCAAGCCCATGGCTTTGG-GGTTCACAGTGGG---ATGAAAACAACTGGGGGTCA i canFam3.chr9 C 0 I 132 s dasNov3.JH570468 453565 389 - 852752 ttagctgagttgttcaggacaagtaggaattaactagttaaaaacagggagggaagagatttccaggtagaagaaacatgtacaaacgaatggaacttgtaaggaaactgttcattaggtgagacttggacataggtgtctgtggagga---gtggtgagccatgaagttagagaagaggacagtgacc-----tgctcatgACAGGCCTTGCATGTGAGAAAGGGGTATTTGTTTTTGGTATGGGGCTGACGTGAAGACTCTGAAGGGCTG-------------------------------GGCTTTGTAAATGTCTCTCTGGCA----TTGGTGTGGAG-GACTGAAT-GAGGGACATGGTCCTGGAT------AGACTGGG-----TAGGAGGCCAGTGGCT-GGG-GGTCCACAGTGGGATGAAAACAACAAATGGGAATCA i dasNov3.JH570468 C 0 C 0 a score=534153.000000 s hg38.chr17_JH159148v1_alt 564 49 + 88070 GGGATCATACTTACAACAAAGAAGGT-TGGGTAACTTGGATTTCTTGTGT s panTro5.chr17 16322746 49 + 83181570 GGGATCATACTTACAGCAAAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227621 49 + 83442489 GGGATCATACTTACAGCAAAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062760 49 + 4267968 GGGATCATACTTACAACAAAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043023 49 - 2193130 GGGATCATACTTACAACAAAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117052 49 - 77216781 GAGATCATACTTACAGCAGAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029914 49 - 80997621 GAGATCATACTTACAGCAGAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086159 49 + 10377808 GAGATCATACTTACAGCAGAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971917 49 - 8458610 GAGATCATACTTACAGCAGAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916156 49 + 75148670 GAGATCATACTTACAGCAAAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156225 49 + 4244037 GAGATCATACTTACAGCAGAGAAGGT-TGGGTAACTTGGATTTCTTGTGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179214 49 + 4569836 GAGATCATACTTTCAGCAAAGAAGGT-TGGGTAACCTGGATTTCTTGTGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135136 49 - 159171411 GGGATCATAATTACAACAAAGAAGAT-TGGGGAACTTGAATTTCTTGTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844775 48 + 3513951 GGGATCATAATTGCAACAAAGAAGGT-TGGGGAAC-TGAATTTCTTGTGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1893528 48 + 1920343 GGGATCATAATTACAACAAAGAAGGT-TGGGGAAC-TGAATTTCTTGTGT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7009864 49 - 7032639 GGGATCATAATTACAACAAAGCAGGT-TGGGGAACTTGAATTTCTTGTGT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22837650 48 + 28711273 GGGAGCACTCTCACAATAAGAAAGTTCTGGGTTACCTGGATTTCT--TAT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22099331 47 - 122082543 GGAGTCTTGCTTGTAGTA-AGGAGGT-TGGGCAATGGGGA-ATCTTGTAG i mm10.chr11 C 0 C 0 s dasNov3.JH570468 453954 42 - 852752 -------TACTTACAATAAGGAAGATCCATGTAATCTGGAATT-TTGTGG i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 21450597 132 + 61074082 I a score=2453533.000000 s hg38.chr17_JH159148v1_alt 613 208 + 88070 GAGAATTTTG---TTTATGTTCTCCTACTTCCTCCAA--GACA--CTCATAGGATAAATTCTGTA-------TCTTACAAAATCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTAGTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGGGCAGCTTGAGTCATCATGAGCACAGTGTGAGGGTCGACcagggcttctcaacttcagcat s panTro5.chr17 16322795 208 + 83181570 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCGTA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTAGTGCGCAGAATGGAGGCCTATTCCTTGTCCTCAAGGGGCAGCTTGAGTCATCATGAGCACAGTGTGAGGGTCGACcagggcttctcaacttcggcat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227670 208 + 83442489 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCGTA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTAGTGCGCAGAATGGAGGCCTATTCCTTGTCCTCAAGGGGCAGCTTGAGTCATCATGAGCACAGTGTGAGGGTCGACcagggcttctcaacttcggcat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4062809 208 + 4267968 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCGTA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTAGTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGGGCAGCTTGAGTCATCATGAGCACAGTGTGAGGGTCGACCAGGGCTTCTCAACTTCGGCAT i gorGor5.CYUI01015385v1 C 0 I 440 s nomLeu3.chrUn_GL397460_1 2043072 208 - 2193130 GAGAATTTTG---TTTATGTTCTCCTAGCTCCTCCAA--GACA--CTCATAAGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTAGTGCACAGAATGGAGGCCTATTCCTTGTGCTCAGGGTGCACCTTGAGTCATCATGAGCACAGTGTGAGGGTCGACcagggcttctcaacttcggcat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117101 208 - 77216781 GAGAATTTTG---TTTATGTTCTCCTAGTTCCCCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTACTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAGTCATCAAGAGCACAGTGTGAGGGTCGACcagggcttttcaactccagtgt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28029963 208 - 80997621 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTACTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAGTCATCAAGAGCACAGTGTGAGGGTCGACcagggcttctcaactccagtgt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086208 208 + 10377808 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCTCTATACTTAGTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAATCATCAAGAGCACAGTGTGAGGGTCGACcagggcttctcaactccagtgt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1971966 208 - 8458610 GAGAATTTTG---TTTAGGTTCTCCTAGTTTCTCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTAACTCTTTATACTTAGTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAGTCATCAAGAGCACAGTGTGAGGGTCGACcagggcttctcaactccagtgt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916205 208 + 75148670 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACCCCCTACACTTACTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAGTCATCAAGAGCACAGTGTGAGGGTCGACcagggcttctcaactccagcgt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156274 208 + 4244037 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAATCTCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCTCTATACTTAGTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAGTCATCAAGAGCACAGTGTGAGGGTCGACcagggcttctcaactccagcgt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179263 207 + 4569836 GAGAATTTTG---TTTATGTTCTCCTAGTTCCTCCAA--GACA--CTCATAGGATAAATTCCATA-------TCTTACAA-ATCCAAGGACAGAGTCTCTTCAAAGCAGTCACTCCCTACACTTAGTGCACAGAATGGAGGCCTATTCCTTGTCCTCAAGGTGCAGGTTGAGTCATCAAGAGCACAGTGTGAGGGCTGACcaggacttctcaactccagagt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135185 206 - 159171411 GAAAATTTTC---CTTATGTTCTCCTAGTTCCTACTA--GACA--CTC--GGGATAAATTCCATA-------TCTTACAATTGCCAAGGACAGAGTCTTTTCAAAACAGTCACTCCCTACACTTAGTTCACCGAATGGAGGCCTATTCCTTGTCCTGCAGGCGCAGCTTGAGTAATCACAAACACAGCGTAAGGGCAGATcagagcgtctccatttcggcct i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1844823 208 + 3513951 GAAAATTTTC---CTTATGTTCTCCTAGTTCCTACGA--GACA--CTCTTAGGATAAATTCCGTG-------TCTTATAATTGCCAAGGACAGAGTCTCTTCAAAACAGTCACTCCCTGCCCTTAGTTCACTGAATGGAGGCCTATTCCTTGTCCGGCAGGTGCAGCTTGAGTAATCACAAGCACAGTGTAAGGGCAGACcagggcttctccatttcggcct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1893576 208 + 1920343 GAAAATTTTC---CTTATGTTTTCCTAGTTCCTACGA--GACA--CTCTTAGGATAAATTCCATG-------TCTTACAATTGCCAAGGACAGAGTCTCTTCAAAACAGCCACTCCCTGCACTTAGTTCACTGAATGGAGGCCTATTCCTTGTCCTGCGGGTGCAGCTTGAGTAATCACAGGCACAGTGTAAGGGAAGACcagggcttctccatttcggcct i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7009913 208 - 7032639 GAAAAATTTC---CTTATGTTCTCCTAGTTCCTACGA--GACA--CTCTTAGGATAAATTCCATA-------TCTTACAATTGCCAAGGACAGAGTCTCTTCAAAACAGTCACTCCCTACACTTAGTTCACTGAATGGAGGCCTATTCCTTGTCCTGCAGGTGCAGCTTGAGTAATCACAAGCACAGTGTAAGGGCAGACcagggcttctccatttcggcct i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22837698 196 + 28711273 GAGAATTTTC---CTTTTGTTCTCCTAGTTCCTTCCA--GACA------TGGTATGTATATCT---------CCTTATAACCTCCAAGGACAGAATCTCTC-----CAGTCACCTTTTGCACTTAGTACACAGAATGGAGGGCTG-CCCTTGTTCTCAAGGTACAGCTTGGGCCATCAGAAGCACAGAAAGGGGGCAGACcagggcttctagacttaggcac i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22099378 186 - 122082543 GAGAGTGTTG---TTT------TCTGAGCCCCAC--A--GACA--CTTGCTATCTAAACATTGCT-------TCCTACA--TCTGAAGCACATAAGCTCTT-----TAGTCAC-----ATCCTTACTTCACAGAATGAAGGG-TCTCTCCTGTCCTCCAGGTCTAACACGAACAATCATAACCACAGAA-GAGGATAGACTAGGGCTTCTCAGCTTTGTCAC i mm10.chr11 C 0 C 0 s canFam3.chr9 21450729 205 + 61074082 AAGAGCCTTGTACTTTATGTTCTCCTAGTCTCTGCCATGAACA--CTCCTTGTGTAAACGCTATATA----CTCTTGCAATC-CTAAGGACAGAGTGTCTTCAAAGTAGTCGC---------TTAGTGCATGGCATGAAGGACTATTCCTTGTCCTCAAGATGCAGCTTGGGCTATCCTGAGCACAA-GAGGAGGTGACCcagagcttctcaactttagtgt i canFam3.chr9 I 132 C 0 s dasNov3.JH570468 453996 209 - 852752 GAGG-----G---TTTATGTTCTCCCAGTCCATATAA--GACATATTCTTTCTATAAACTCCATTCATATCCTCTTAAAATCTCCAAGGGCAGGACATCTTCAAAGAAGTCACCCTCTACACTTAGTTCACAGAATGGAAGGTTATGCCTTGTCCTCAAGATGCAGCTTGGGTTATCACACGAAAAG--GAGAGGTAGACTAGTG-ttttcaaccttaactc i dasNov3.JH570468 C 0 C 0 a score=64316.000000 s hg38.chr17_JH159148v1_alt 821 5 + 88070 tattg s panTro5.chr17 16323003 5 + 83181570 tattg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227878 5 + 83442489 tattg i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043280 5 - 2193130 tattg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117309 5 - 77216781 tattg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030171 5 - 80997621 tattg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086416 5 + 10377808 tattg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972174 5 - 8458610 tattg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916413 5 + 75148670 tattg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156482 5 + 4244037 tattg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179470 5 + 4569836 tattg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135391 5 - 159171411 tattg i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845031 5 + 3513951 tattg i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1893784 5 + 1920343 tattg i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010121 5 - 7032639 tattg i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22837894 5 + 28711273 tgctg i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22099564 5 - 122082543 CACCG i mm10.chr11 C 0 C 0 s canFam3.chr9 21450934 5 + 61074082 tgttg i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 454205 5 - 852752 tatta i dasNov3.JH570468 C 0 C 0 e gorGor5.CYUI01015385v1 4063017 440 + 4267968 I a score=2753085.000000 s hg38.chr17_JH159148v1_alt 826 216 + 88070 acattttgggctgggcgattctttgttgtaaaggctgtcctgtgaattataggatgttaagcagcatccctggcctctatgaaccagattctagtagcatcctttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaaccactgGGTCAGACTATGGCAGAGGGAGAAAGTCA s panTro5.chr17 16323008 216 + 83181570 acattttgggctgggcgattctttgttgtaaaggctgtcctgtgaattataggatgttaagcagcatccctggcctctatgaaccagattctagtagcatcctttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaaccactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16227883 216 + 83442489 acattttgggctgggcgattctttgttgtaaaggctgtcctgtgaattataggatgttaagcagcatccctggcctctatgaaccagattctagtagcatcctttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaaccactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063457 215 + 4267968 acattttgggctgggcgattctttgttgtaaaggctgtcctgtgaattataggatgttaagcagcatccctggcctctaggaaccagattctagtagcatcctttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaaccactgGGTCAGACTATGGCATA-GGAGAAAGTCA i gorGor5.CYUI01015385v1 I 440 C 0 s nomLeu3.chrUn_GL397460_1 2043285 226 - 2193130 acattttgggctgggtgattctttgttgtaaaggctgtcctatgaattgtaggatgttaagcagcatccctggcctctatgaaccagattctagtagcatcccttgag-ggtgatgatc-acaaatgtctccagacattgccagacattgccaaacattgcctgggagt-----gcaaaaatcaccactgtttgagaaccactgGGTCAGACTACAGCAGAGGGAGAAAGTCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117314 216 - 77216781 acattttgggctgggtgattctttgttgtaatggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctatgaaccagattctagtagcatcccttgag-ggtgatgatc-acaaatgtct----------ccagacattgtcaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaatcactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030176 216 - 80997621 acattttgggctgggtgattctttgttgtaatggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctatgaaccagattctagtagcatcccttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaatcactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086421 216 + 10377808 acattttgggctgggtgattctttgttgtaatggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctatgaaccagattctagtagcatcccttgag-ggtgatgatc-acaaatgtct----------ccagacattgctaaacattgcctgggagt-----gcaaaaatcatccctgtttgagaatcactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972179 216 - 8458610 acattttgggctgggtgattctttgttgtaatggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctatgaaccagattctagtagcatcccttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaatcactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916418 216 + 75148670 acgttttgggctgggtgattctttgttgtaatggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctatgaaacagattctagtagcatcccttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaatcactgGGTCAGACTATGGTAGAGGGAGAAAGTCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156487 216 + 4244037 acattttgggctgggtgattctttgttgtaatggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctatgaaccaggttctagtagcatcccttgag-ggtgatgatc-accaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagaatcactgGGTCAGACTATGGCAGAGGGAGAAAGTCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179475 216 + 4569836 acattttgggctgggtgattctttgttgtaacggctgtcctgtgaattgtaggatgttaagcagcatcgctggcctctgtgaaccagattctagtagcatcccttgag-ggtgatgatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----gcaaaaatcacccctgtttgagagtcactgGGTCAGACTATGGCAGAGGGAGAAGGTCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135396 216 - 159171411 acattttgggctgggtgatgctttgttgtaaaggctgtcctgtgccttgtaggatgtttagcagcatctctggcctctaggaaccagattctagtagcatcccttgag-ggtgataatc-acaaatgtct----------ccagacattgccaaacattgcctgggagt-----acaaagttcacctctgtttgggaaccactgGGTTAGTCAATGGCAGAGGAAGAAAGTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845036 217 + 3513951 acattttgggctgggtgatgctttgttgtaaaggctgtcctgtgccttgcaggatgtctagcagcatccctggcctctaggaaccagattctagtagcatcccttgag-ggtgacaatc-actaatgtct----------ccagacattgccaaacattgcctgggagt----aacaaaggtcacctctgtttgggaaccactgGGTTAGACAACGGCAGTGGGAGAAAGTCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1893789 217 + 1920343 acattttgggctgagtgatgctttgttgtaaaggctgtcctgtgccctgtaggatgtttagtagcatccctgtcctctaggaaccagattctagtagcatcccttgag-ggtgataatc-acaaatgtct----------ccagacattgccaaacattgcctggaagt----aacaaaggtcacccctgtttgggaaccgctgGGTTAGACAACGGCAGAGGGAGAAAGTCA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010126 216 - 7032639 acattttgggctgggtgatgctttgttgtaaaggctgtcatgtgccttgtaggatgtttagcagcatccctggcctctagaaaccagattctggtagcatcccttgag-gatgataacc-aaaaatgtct----------ccagacattgccaaacattgcctgggagt-----acaaaggtcacccctgtttgggaaccactgGGTTAGACAATGGCAGAGGGAGAAAGTCA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22837899 214 + 28711273 aca-tttgggctggattattctttgtcatgggtgctgtcctgggcattgtaggatgtcaagcagcatccctggcctctaccaaccaga-tccactagtgtcccttgag-tgtgatgact-ataaatgtct----------ccagacattgcccaatatcctctgggtgt-----gcaaaacctactcctgtttgagacccactgGGCTAGACAATAGTAGAGGAAGTAAGAGA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22099569 154 - 122082543 ACA-TTTGAATGGGACAGTCATTGGCTGAGGAGCCT-----------TGGAGATCATCAAGCAGAATTCCTGGTCTCT----ACCAG-----------------------------------------------------CCAGGCATTGCCAGACGCCCTGCGGGAAT----CGTGAAGCCAGCCACTG---GAGAATCA---GATTATGCAACGGCAGAGGGAGAAAGTCA i mm10.chr11 C 0 C 0 s canFam3.chr9 21450939 221 + 61074082 atattttgggctgaaaaattcattgctgtggggaccatctttcacattgttgtatattaagcagaatccctgccctttaccaactaaatgctggtagcataccctaag-tgtgatgatcaaaaaatgtct----------ccagacattggcaaacaac-cctggggatgaggggcaaaaattgcccctatttgagaataactgGGTTATATAGTGGCCAAAGGAGAAATTCA i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 454210 210 - 852752 acattttggactggataattctttgttgtggggactgccctgtgtattttaggaagtttagcagcattcctggtttttaccaactatatactaatagcacaccctgaattgtgacaatc-aaaaatatct----------ccagacattgccaaatatcccttgg---------acaaaaatcccct---tttgagaaccactAGGTTTGAAAATGGAAATGGGAGAAAGTTA i dasNov3.JH570468 C 0 C 0 a score=34381.000000 s hg38.chr17_JH159148v1_alt 1042 3 + 88070 AAA s panTro5.chr17 16323224 3 + 83181570 AAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228099 3 + 83442489 AAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063672 3 + 4267968 AAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043511 3 - 2193130 AAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117530 3 - 77216781 GAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030392 3 - 80997621 GAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086637 3 + 10377808 GAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972395 3 - 8458610 GAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916634 3 + 75148670 AAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156703 3 + 4244037 GAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179691 3 + 4569836 AAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135612 3 - 159171411 AAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845253 3 + 3513951 AAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1894006 3 + 1920343 AAA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010342 3 - 7032639 AAA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838113 3 + 28711273 AAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22099723 3 - 122082543 ATA i mm10.chr11 C 0 C 0 s dasNov3.JH570468 454420 3 - 852752 AAA i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 21451160 3 + 61074082 I a score=997343.000000 s hg38.chr17_JH159148v1_alt 1045 82 + 88070 GCAAAACTTAATC------ACATTGGT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCTTCCAGAGTCAAGA s panTro5.chr17 16323227 82 + 83181570 GCAAAACTTAATC------ACATTGGC----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGCCTCCTTCCAGAGTCAAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228102 82 + 83442489 GCAAAACTTAATC------ACATTGGC----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCTTCCAGAGTCAAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063675 82 + 4267968 GCAAAACTTAATC------ACATTGGT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTCATCAT-TGTCTCCTTCCAGAGTCAACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043514 81 - 2193130 GCAAAACTT-ATC------ACATTGGT----GTTGGATTTACTGTCTCATCAAGCCATTGAGATTTATCAT-TGTCTGCTTCCAGAGTCAAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117533 81 - 77216781 GCAAAACTT-ACC------ACATTGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTTCTTCCAGAGTCAAGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030395 81 - 80997621 GCAAAACTT-ACC------ACATTGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCTTCCAGAGTCAAGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086640 81 + 10377808 GCAAAACTT-ACC------ACATTGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTTCTTCCAGAGTCAAGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972398 81 - 8458610 GCAAAACTT-ACC------ACATTGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCATCCAGAGTCAAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916637 81 + 75148670 GCAAAACTT-AAC------ACATTGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCTTCCAGAGTCAAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156706 81 + 4244037 GCACAACTT-ACC------ACATAGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCTTCCAGAGTCAAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179694 82 + 4569836 GCAAAACTTAACC------ACATTGAT----GTTGGAGTTACTGTCTCATCAAGCCATTGGGATTTATCAT-TGTCTCCTTCCAGAGTCAAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135615 85 - 159171411 GCAAAACTT-ATC--CTGTACATTGGT----GTTGGAGTTACTTTCTCCTCAAGCCATTGGGATTTATCGT-TGTCTCCTTCCAGAGTCAAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845256 85 + 3513951 GCAAAACTT-ATC--CTGTACCCTGGT----GTTGGAGTTACTTTCTCATCAAGCCATTGGGATTTATTGT-CGTCTCCTTCCAGAGTCAAGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1894009 85 + 1920343 GCAAAACTT-ATC--CTGTACACTGGT----GTTGGAGTTACTTTCTCATCAAGCCATTGGGATTTATTGT-TGTCTCCTTCCAGAGTCAAGA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010345 82 - 7032639 GCAAAACTT-ATC--CTGTACATTGGT----GTTGGAGTTACTTTCTCATCAAGCCATTGGGATTTA---T-CGTCTCCTTCCAGAGTCAAGA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838116 86 + 28711273 ACACATTGG-AGCTACTGCACATTGGT-----TTGGAGCTGCTGCCTCATCAGGACATTGGGATTTGTTTTCTGTCTCCTTCCA-AGTCAAGA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22099726 81 - 122082543 GCGAAACTT-ACC---TGCACGTGGGTGTTGGTTGGAGTCACTGTCACCACAGGACATTAGGATTGAAT-C-TATCTCCTTCAGACG------ i mm10.chr11 C 0 C 0 s canFam3.chr9 21451163 84 + 61074082 GTGGAACTT-AAC--CAGTACAT-GGT----GTCAGGGTTACTATCTCATCAGGCCATTGAGATTTATCTC-CATTTCCTTCCAGAGTCAAGA i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 454423 85 - 852752 GTGAAACAT-AGT--TTACATATTGAT----ATTGGAATAAATGCCTCATCAGGTCATTGGGATTTATCTC-TGTTTCCTTCCAGAGCCAAGA i dasNov3.JH570468 C 0 C 0 a score=5175.000000 s hg38.chr17_JH159148v1_alt 1127 1 + 88070 G s panTro5.chr17 16323309 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228184 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063757 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043595 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117614 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030476 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086721 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972479 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916718 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156787 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179776 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135700 1 - 159171411 C i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845341 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1894094 1 + 1920343 C i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010427 1 - 7032639 C i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838202 1 + 28711273 G i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 454508 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22099807 0 - 122082543 C e canFam3.chr9 21451247 0 + 61074082 C a score=120295.000000 s hg38.chr17_JH159148v1_alt 1128 13 + 88070 GGGAGTTGGCCAg s panTro5.chr17 16323310 13 + 83181570 GGGAGTTGGTCAg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228185 13 + 83442489 GGGAGTTGGTCAg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063758 13 + 4267968 GGGAGTAGGCCAg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043596 13 - 2193130 GGGAGTTGGCCAg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117615 13 - 77216781 TGGAGCTGGCCAg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030477 13 - 80997621 TGGAGCTGGCCAg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086722 13 + 10377808 TGGAGCTGGCCAg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972480 13 - 8458610 GGGAGCTGGCCAg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916719 13 + 75148670 GGGAGCTGGCCAg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156788 13 + 4244037 GGGAGCTGGCCAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179777 13 + 4569836 GGGAGCTGGCCAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135701 13 - 159171411 GGGAGTTGGCTgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845342 13 + 3513951 GGGGGTTGGCCAg i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1894095 13 + 1920343 GGGGGTTGGCCAg i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010428 13 - 7032639 GGGGATTGGCCAg i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22099807 13 - 122082543 AGGAGTTAGCCAG i mm10.chr11 C 0 I 886 s dasNov3.JH570468 454509 4 - 852752 AAGA--------- i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 21451247 0 + 61074082 C e otoGar3.GL873537 22838203 0 + 28711273 C a score=281784.000000 s hg38.chr17_JH159148v1_alt 1141 30 + 88070 ccggatgctgtggctaaagcctataatccc s panTro5.chr17 16323323 30 + 83181570 ccagatgctgtggctaaagcctataatccc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228198 30 + 83442489 ccagatgctgtggctaaagcctataatccc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063771 30 + 4267968 ccggatgctgtggctaaagcctataatccc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043609 30 - 2193130 ccggatgctgtggctaaagcctgtaatccc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117628 30 - 77216781 ccggatgctgtggctaatgcctgtaatccc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030490 30 - 80997621 ccggatgctgtggctaatgcctgtaatccc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086735 30 + 10377808 ccggatgctgtggctaatgcctgtaatccc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972493 30 - 8458610 ccggatgctgtggctaatgcctgtaatccc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916732 30 + 75148670 ccggatgctgtggctaatgcctgtaatccc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156801 30 + 4244037 ccggatgctgtggctaatgcctgtaatccc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179790 30 + 4569836 TGggatgctgtggctaatgcctgtaatccc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135714 30 - 159171411 caggatgcggtggctcaatcctgtaatccc i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845355 30 + 3513951 caggatgcggtggctcacacctgtaatccc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1894108 30 + 1920343 caggatgtggtggctcacacctgtaatccc i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7010441 30 - 7032639 caggatgcggtggctcatacctgtaatccc i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 454513 19 - 852752 -----------GGCTAGGGTTTTAAATCTc i dasNov3.JH570468 C 0 I 286 e mm10.chr11 22099820 886 - 122082543 I e canFam3.chr9 21451247 0 + 61074082 C e otoGar3.GL873537 22838203 0 + 28711273 C a score=1089716.000000 s hg38.chr17_JH159148v1_alt 1171 109 + 88070 agcacttcgggaggccgaggtgggtgaatcacctgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccgcatctctactaaaaatacaaaaattagctgg s panTro5.chr17 16323353 109 + 83181570 agcactttgggaggccgaggcgggtgaatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228228 109 + 83442489 agcactttgggaggccgaggcgggtgaatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063801 109 + 4267968 agcactttgggaggccgaggcaggtgaatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043639 108 - 2193130 agcactttgggacaccaaggtgggtgaatcacctgaggt-aggagttggagaccagcctggccaacatggtgaaaccccatctctactaaaactacaaaaattagctgg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117658 109 - 77216781 agcactttgggaggtccaggcgggtgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagttgg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030520 109 - 80997621 agcactttgggaggtccaggcgggcgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagttgg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086765 109 + 10377808 agcactttgggaggtccaggcgggcgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagttgg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972523 109 - 8458610 agcactttgggaggtccaggcgggcgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagttgg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916762 109 + 75148670 agcgctttgggaggcccaggtgggcgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156831 109 + 4244037 agcactttgggaggtccaggcgggcgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattatctgg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179820 109 + 4569836 agtactttgggaggcccaggtgggcgaatcatctgaggtcaggagttcaaaaccagcctggccaacatggtgaaacccaatctctactaaaaatacaaaaattagctgg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135744 109 - 159171411 agcactttgggaggccgaggcaggaggatcacctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaacctgtctctactaaaaatacaaaaattacctgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845385 109 + 3513951 agcactttgggaggctgaggtgggaggatcacctgagggcaggagttcaaaaccagcctggccaacatggtgaaaacctgtctctactaaaaatacaaaaattagctgg i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1894138 109 + 1920343 agcactttgggaggccgaggtgggaggatcacctgaggtcaggagttcaaaaccagcctggccaacatggtgaaaacctgtctctgctaaaaatccaaaaattagctgg i cebCap1.NW_016107730v1 C 0 M 3165 s aotNan1.NW_018502359v1 7010471 109 - 7032639 agcactttgggaggccaaggcgggaggatcacttgaggtcaggagttcaaaaccagcctggccaacatggtgaaaacctgtctttactaaaaatacaaaaattagctgg i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22099820 886 - 122082543 I e canFam3.chr9 21451247 0 + 61074082 C e dasNov3.JH570468 454532 286 - 852752 I e otoGar3.GL873537 22838203 0 + 28711273 C a score=676162.000000 s hg38.chr17_JH159148v1_alt 1280 87 + 88070 tcatggtggcgcacgcctgtagtcccagctact-aggaggctgaggcaggagaattgcttgaatctg---gaaggaggttgcagtgagcca s panTro5.chr17 16323462 87 + 83181570 tcatggtggtgcacgcctgtagtcccagctact-aggaggctgaggcaggagaattgcttgaatccg---gaaggaggttgcagtgagcca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228337 87 + 83442489 tcatggtggtgcacgcctgtagtcccagctact-aggaggctgaggaaggagaattgcttgaatccg---gaaggaggttgcagtgagcca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063910 87 + 4267968 tcatggtggcgcacgcctgtagtcccagctact-aggaggctgaggcaggagaattgcttgaatctg---gaaggaggttgcagtgagcca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043747 90 - 2193130 tcatggtggcacacgcctgtagtcccacctact-aggaggctgtggcaggacaattgcatgaaccggggaggaggaggttgcagtgagcca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117767 90 - 77216781 tcatggaggcgcacacctgtagtcccagttact-aggagattgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagcca i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030629 90 - 80997621 tcatggaggcgcacacctgtagtcccagttact-aggagattgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagcca i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086874 90 + 10377808 tcgtggaggcgcacacctgtagtcccagttact-aggagattgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagcca i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972632 90 - 8458610 tcgtggaggcgcacacctgtagtcccagttact-aggagattgaggcaggagaattgcttgaacccgggaggaggaggttgcagtgagcca i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916871 90 + 75148670 tggtggaggtgcacacctgtagtcccagttact-aggaggttgaggcaggagaattgcttgaacctgggaggaggaggttgcagtgagcca i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2156940 90 + 4244037 tcgtggaggcgcacacctgtagtcccagttact-aggagattgaggcaggaaaattgcttgaacccgggaggaggaggttgcagtgagcca i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2179929 90 + 4569836 tcgtggaggcgcacacctgtagtcccagttact-aggaggttgaggcaggagaactgcttgaacccgggaggaagaggttgcagtgagcca i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135853 87 - 159171411 ggatggcggtgcacgcctgtagtcccagctactcaggaagttgaggcaggagaattgcttgaattcaggaggccaagattgcagtga---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845494 91 + 3513951 ggattgtggtgcacgcctatagttccagctattcaggaaactgaggcaggagaattgctggaattcgggaggctgaggttgcagtaagcca i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7010580 91 - 7032639 ggatggctttgcacgcctgtagttccagctactcaggaagctgaggcaggagaactgcttgaattcaggaggccgaggttgcagtgagcca i aotNan1.NW_018502359v1 C 0 I 94 e mm10.chr11 22099820 886 - 122082543 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e canFam3.chr9 21451247 0 + 61074082 C e dasNov3.JH570468 454532 286 - 852752 I e otoGar3.GL873537 22838203 0 + 28711273 C a score=269268.000000 s hg38.chr17_JH159148v1_alt 1367 42 + 88070 agatcacttcactgcactccagcctgggcgacagagagagat s panTro5.chr17 16323549 42 + 83181570 agatcacttcactgcactccagcctgggtgacagagagagat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228424 42 + 83442489 agatcacttcactgcactccagcctgggtgacagagagagat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4063997 42 + 4267968 agatcacttcactgcactccagcctgggcgacagagagagat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043837 42 - 2193130 agatcactccactgcactccagcctgggcgacagagagagat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117857 42 - 77216781 agatcgcgccattgcactccaacctgggtgacagagacagac i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030719 42 - 80997621 agatcgcgccattgcactccaacctgggtgacagagacagac i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2086964 42 + 10377808 agatcgcgccattgcactccaacctgggtgacagagacagac i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972722 42 - 8458610 agatcgcgccattgcattccaacctgggtgacagagacagac i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64916961 42 + 75148670 agatcgtgccattgcactccaacctgggtgacagagagagac i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157030 42 + 4244037 agattgcgccattgcacttcaacctgggtgacagagacagac i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180019 42 + 4569836 agattgcaccattgcactccaacctgggtgacagagagagac i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135940 35 - 159171411 -------gcctctgtactccagcctgggtgatagagcgaaag i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845585 42 + 3513951 agatggtgccgctgcactccaacctgggtgatggagggaaaa i saiBol1.JH378271 C 0 I 34 e mm10.chr11 22099820 886 - 122082543 I e aotNan1.NW_018502359v1 7010671 94 - 7032639 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e canFam3.chr9 21451247 0 + 61074082 C e dasNov3.JH570468 454532 286 - 852752 I e otoGar3.GL873537 22838203 0 + 28711273 C a score=65696.000000 s hg38.chr17_JH159148v1_alt 1409 39 + 88070 tctgtct---AAa----cacacacacacacacac-acacac------------------------------------------acacac s panTro5.chr17 16323591 39 + 83181570 tctgtct---AAa----cacgcacacacacacac-acacac------------------------------------------acacac i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228466 39 + 83442489 tctgtct---AAa----cacgcacacacacacac-acacac------------------------------------------acacac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064039 39 + 4267968 tctgtct---AAa----cacacacacacacacac-acacac------------------------------------------acacac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043879 42 - 2193130 tctgtcttaaaaa----cacgcacacacacacac-acagag------------------------------------------aaagag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117899 38 - 77216781 tctgtct---aaa----aaaacaaaaacaaaaaa-aCAGCT-------------------------------------------gagag i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030761 36 - 80997621 tctgtct---aaa----aaaacaaaaacaaaaaa-aCAGCT---------------------------------------------gag i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087006 33 + 10377808 tctgtct---aaa----aaaacaaaaacaaaaaa-aCAGCT------------------------------------------------ i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972764 39 - 8458610 tctgtct---aaa----aaaacaaaaacaaaaaa-aCagag------------------------------------------agagag i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917003 86 + 75148670 tccgtct---aaaaaacaaaaccaaaaccaaaaacacacacacacacacacacacacacacacacacagagagagagagagagagagag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157072 36 + 4244037 ttcgtct---aaa----aaaacaaaaacaaaaaccac----------------------------------------------aaaaaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180061 47 + 4569836 tctgtct---aaa----aaaacaaaaacaaaaac-aaaaac----------------------------------aaaaaAACagagag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46135975 39 - 159171411 tcaatct---aag----aaaaaaCagagagagag-agagag------------------------------------------agagag i calJac3.chr5 C 0 I 10 e mm10.chr11 22099820 886 - 122082543 I e aotNan1.NW_018502359v1 7010671 94 - 7032639 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e canFam3.chr9 21451247 0 + 61074082 C e dasNov3.JH570468 454532 286 - 852752 I e otoGar3.GL873537 22838203 0 + 28711273 C e saiBol1.JH378271 1845627 34 + 3513951 I a score=17649.000000 s hg38.chr17_JH159148v1_alt 1448 5 + 88070 acaca---------------- s panTro5.chr17 16323630 9 + 83181570 acaca------------caGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228505 21 + 83442489 acacacacacacacacacaGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064078 17 + 4267968 acaca----cacacacacaca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043921 17 - 2193130 agaga----gaaagagagaga i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117937 17 - 77216781 agaga----gagagagagaga i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030797 17 - 80997621 agaga----gagagagagaga i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087039 16 + 10377808 -gaga----gagagagagaga i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972803 17 - 8458610 agaga----gagagagagaga i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917089 17 + 75148670 agaga----gagagagagaga i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157108 17 + 4244037 aCAGA----CAGAGAGAGAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180108 17 + 4569836 agaga----gagagagagaga i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136024 5 - 159171411 ----------------agaga i calJac3.chr5 I 10 C 0 s saiBol1.JH378271 1845661 5 + 3513951 ----------------aGAGA i saiBol1.JH378271 I 34 C 0 e mm10.chr11 22099820 886 - 122082543 I e aotNan1.NW_018502359v1 7010671 94 - 7032639 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e canFam3.chr9 21451247 0 + 61074082 C e dasNov3.JH570468 454532 286 - 852752 I e otoGar3.GL873537 22838203 0 + 28711273 C a score=165633.000000 s hg38.chr17_JH159148v1_alt 1453 21 + 88070 GGAGTTGGCTAGGGTTTTGAA s panTro5.chr17 16323639 21 + 83181570 GGATTTGGCTAGGGTTTTGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228526 21 + 83442489 GGATTTGGCTAGGGTTTTGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064095 21 + 4267968 cGAGTTGGCTAGGGTTTTGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043938 21 - 2193130 ggagTTGGCTAGGGTTTTGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117954 21 - 77216781 ggagTTGGCTAGGGTTTTGAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030814 21 - 80997621 ggagTTGGCTAGGGTTTTGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087055 21 + 10377808 ggagTTGGCTAGGGTTTTGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972820 21 - 8458610 gGAGTTGGCTAGGGTTTTGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917106 21 + 75148670 gGAGTTGGCTAGGGTTTTGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157125 21 + 4244037 GGAGTTGGCTAGGGTTTTGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180125 21 + 4569836 ggagCTAGCTAGGGTTTTGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136029 15 - 159171411 gGACTTGACTAGGAT------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845666 21 + 3513951 GGAGTTGACTAGGGTTTTGAA i saiBol1.JH378271 C 0 C 0 s canFam3.chr9 21451247 21 + 61074082 GGAGCTGGTCAGAGTTTTAAA i canFam3.chr9 C 0 C 0 e mm10.chr11 22099820 886 - 122082543 I e aotNan1.NW_018502359v1 7010671 94 - 7032639 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e dasNov3.JH570468 454532 286 - 852752 I e otoGar3.GL873537 22838203 0 + 28711273 C a score=63135.000000 s hg38.chr17_JH159148v1_alt 1474 8 + 88070 Cctctgtg s panTro5.chr17 16323660 8 + 83181570 Cctctgtg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228547 8 + 83442489 Cctctgtg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064116 8 + 4267968 Cctctgtg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043959 8 - 2193130 Cctctgtg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117975 8 - 77216781 CCTCTGTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030835 8 - 80997621 CCTCTGTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087076 8 + 10377808 CCTCTGTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972841 8 - 8458610 CCTCTGTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917127 8 + 75148670 CCTCTGTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157146 8 + 4244037 CCTCTGTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180146 8 + 4569836 CCTCTATA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136044 4 - 159171411 ----TTTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845687 8 + 3513951 CCTCTTTG i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22838203 8 + 28711273 TCTCTGTG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21451268 8 + 61074082 TCTCTGTC i canFam3.chr9 C 0 C 0 e mm10.chr11 22099820 886 - 122082543 I e aotNan1.NW_018502359v1 7010671 94 - 7032639 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e dasNov3.JH570468 454532 286 - 852752 I a score=2592883.000000 s hg38.chr17_JH159148v1_alt 1482 271 + 88070 ccaagcactggactaagcatttcatatggattaCAGCAATTCTttgaagtaatatgt--attctctcctattttttcacctatacataagatgcagaattcgaaggacaaacaatccaagtgcccatcaat--ggacaattaaattgtggtatattcacccaatgggatattatact---gtgaagatgactggaaaatggcgacatgcaatagcatggatgaatcttactaacatagtgttgattgatataaacaagctccagaaaacc---------------------atacgtgt s panTro5.chr17 16323668 271 + 83181570 ccaagcactggactaagcatttcatatggattaCAGCAATTCTttgaagtaatatgt--attctctcctattttttcacctatacataagatgcagaattcggaggacaaacaatccaagtgcccatcaat--ggacaattaaattgtggtatattcacccaatgggatattatact---gtgaaaatgactggaaaatggcgacatgcaatagcatggatgaatcttactaacatagtgttgattgatataaacaagctccagaaaacc---------------------atatgtgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228555 270 + 83442489 ccaagcactggactaagcatttcatatggattaCAGCAATTCTttgaagtaatatgt--attctctccta-tttttcacctatacataagatgcagaattcggaggacaaacaatccaagtgcccatcaat--ggacaattaaattgtggtatattcacccaatgggatattatact---gtgaaaatgactggaaaatggcgacatgcaatagcatggatgaatcttactaacatagtgttgattgatataaacaagctccagaaaacc---------------------atacgtgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064124 271 + 4267968 ccaagcactggactaagcatttcatatggattacagcaattctttgaagtaatatgt--attttctcctattttTTCACCTATACATAAGATGCAGAATTcgaaggacaaacaatccaagtgcccatcaat--ggacaattaaattgtggtatattcacccaatgggatattatact---gtgaaaatgactggaaaatggcgacatgcaatagcatggatgaatcttactaacatagtgttgactgatataaacaagctccagaaaacc---------------------atacgtgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2043967 271 - 2193130 ccaagcactggactaagtatttcatatggattaCAGCAATTCTGTgaagtaatatgt--attctctcgtattttttcccctatacataagatgcagaatttgaaggacaaacaatccaagtgcccatcaat--ggacaagtaaattgtggtatattcacccaatgagatattatact---gtgaaaataactggaaaatggtgacatgaaatagcatgggtgaatcttactaacataatgttgattgatataaataagctctagaaaacc---------------------atacgtgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30117983 269 - 77216781 CCAAGTACTGGACTAAGTATTTCATACAGATTACAGCAATTCTGTgaagtaatatgt--attctctcctattttttc-cctgtacataagatgcagaatttgaaggacaaacaatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgactgg-acacggtgacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaacaagctccggaaaacc---------------------atacgtgt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28030843 267 - 80997621 CCAAGTACTGGACTAAGTATTTCATACGGATTACAGCAATTCTGTgaagtaatatgt--attctctcctattttttc-cctgtacataagatgcagaatttgaaggacaaacaatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgactgg-acacggggacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaacaagctccggaaaacc---------------------atac--gt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087084 267 + 10377808 CCAAGTACTGGACTAAGTATTTCATACGGATTACAGCAATTCTGTgaagtaatatgt--attctctcctattttttc-cctgtacataagatgcagaatttgaaggacaaacaatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgactgg-acacggggacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaacaagctccggaaaacc---------------------atac--gt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1972849 269 - 8458610 CCAAGTACTGGACTAAGTATTTCATATGGATTACAGCAATTCTGTgaagtaatatgt--attctctcctattttttc-cctgtacataagatgcagaatttgaaggacaaacaatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgactgg-acacggtgacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaacaagctccggaaaacc---------------------atacgtgt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917135 269 + 75148670 CCAAGCATTGGACTAAGTATTTCATATGGATTACAGCAATTCTGTgaagtaatatgc--attctctcctattttttc-cctgtacataagatgcagaatttgaaggacaaacaatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgacagg-acatggggacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaataagctccagaaaacc---------------------atacgtgt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157154 269 + 4244037 CCAAGTACTGGACTAAGTATTTCATATGGATTACAGCAATTCGGTgaagtaatatgt--attctctcctattttttc-cctgtacataagatgcagaatttgaaggacaaacaatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgactgg-acacggtgacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaacaagctccggaaaacc---------------------atacgtgt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180154 269 + 4569836 CCAAGCACTGGACTAAGTATTTCATACGGATTACAGCAATTCTGTgaagtaatatgt--attctctcctattttttc-cctgtacataagatgtagaatttgaaggacaaataatccaagtgcccatccat--ggacaagtaaattgtagtatattcacacaatgggatatcatact---gtgaaaatgactgg-acatggtgacatgcaatagcatgggtgaatcttaccaacataatgttgattgatataaacgagctccagaaaacc---------------------atacgtgt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136048 270 - 159171411 CCGAGCACTGGACTAAGTATTTCATATGGATTACAGCAATTCTGTgaagtaatatta--atactctcttattttctcctttatatataagatgcagaatttgaaagacaaa-aatccaagtgcccatcaat--agacaaataaattgtggtatatccgcacaatggggtatcatact---atgaaaataactggacaatggtgacctgcaatagcatgggcgaatcttactaacataaaattgattgatattaacaaactccagaaaacc---------------------ataaatgt i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845695 271 + 3513951 CCAAGCACTGGACTAAGGATCTCCTATGGATTACAGCAATTCTGTGTAGTAATATTT--ATTCTCTCTGATTTTCTCCTTTACATATAAGATGCGGAATTTGAAGGACaaaccatccaagtgcccatcaat--agacaagtaaattgtggtatatccatacaatggggtatcatact---gtgaaaatgactggacagtggtgacctgcaatagcctgggtgaatcttactaacataatgttgactgatataaacaaactccagaaaatc---------------------ctatgtgt i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7010765 271 - 7032639 CCAAGCACTGGACTAAGTATTTCATATGGATTACAGCAATTCTGTGAAGTACTATTA--ATTCTCTCTTATTTTCTCCTTTATATATAAGATGCAGAATGTGAAGGACaaaaaatccaagtgcccatcaat--agacaagtaaattgtggtatatccacacaatgggatatcatact---gtgaaaatgactggacaatggtgacctgcaatagcatgggtgaatcttactaacataatgttgattgatataaacaaactccagaaaacc---------------------atacgtgt i aotNan1.NW_018502359v1 I 94 C 0 s otoGar3.GL873537 22838211 291 + 28711273 CCAAGAGCTGGACTTAGTGTTTTACATAATTCACAGCAATTTTGTGAAGTAATATTTTCTTCCTCTCCTATTTTCTT-Cctatgtacaagaggaagaatctgaaggacaaacaatccaagtgcccctcaac--agacatgtaaattgtggtatattcatacaatggaatattgca-----gtgaaaatgattagagaacggctgcatgaaacaacacaggtgaagcttactaacataacgtacattaataaaaacaaacctcagaagacCTCTCCCTCGatatatatctctatacatat i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21451276 248 + 61074082 CCAAGCAC-AGACCCAGTGTTTAATGTAAATCATAGCAATTCTGTGAAGTAAGATTT--CTTTCCCTCTACTTT-------------------AGGAGTATGAGTGACaaataatccaaggaccaataaatagagacaagaaaattgtggtatattcacacaat-aaatactatgctacagtgaaaataactggacaatggccatatgcaa-aatggggatgaacctaacgagtgtagagt----tgatataaacaagcctc--aagatc---------------------acatgttt i canFam3.chr9 C 0 C 0 e mm10.chr11 22099820 886 - 122082543 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e dasNov3.JH570468 454532 286 - 852752 I a score=1517040.000000 s hg38.chr17_JH159148v1_alt 1753 221 + 88070 gtgtatatatttatgtat-------attaatataa--tg------tgtg-------------tatatATATA------CACACACTCAAACATATATGTGTGTAT-------TGTTCAAAAACCACAGACA--CACATATGT------ATGAGTATACATGCATTT---------------------------ATACACATAT----------------------------------------------------------------GTACACACACAA--------------------------ACAC-------------------ATATATATA-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCATGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACCCAG--------------------TTCTT s panTro5.chr17 16323939 221 + 83181570 gtgtatatatttatgtat-------attaatataa--tc------tgtg-------------tatatatata------cacacactcaaacatatatgtgtgtat-------tgttcaaaaaCCACAGACA--CACATATGT------ATGAGTatacatgcattt---------------------------atacacatat----------------------------------------------------------------gcacacacacaa--------------------------acac-------------------atatatata-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCATGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACCCAG--------------------TTCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16228825 221 + 83442489 gtgtatatatttatgtat-------attaatataa--tc------tgtg-------------tatatatata------cacaCACTCAAACATATATGTGTGTAT-------TGTTCAAAAACCACAGACA--CACATATGT------ATGAGTatacatgcattt---------------------------atacacatat----------------------------------------------------------------gcacacacacaa--------------------------acac-------------------atatatata-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCATGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACCCAG--------------------TTCTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064395 223 + 4267968 gtgtatatttttatGtat-------attaatataa--tg------tgtg-----------tatatatatata------cacacactcaaacatatatgtgtgcat-------tgttcaaaaactacagaca--cacatatgt------atgagtatacatgcattt---------------------------atacacatat----------------------------------------------------------------gcacacacacaa--------------------------acac-------------------atatatata-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCATGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACCCAG--------------------TTCTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044238 225 - 2193130 gtatatatatttatgtat-------attaatataa--tg------aatg---------------tatatata------cacacaCTCAAACATATATGTGTGCAT-------TGTTCAAAAACCACAGACA--CACATATGT------ATGAGTATACATGCATTT---------------------------atacacatac----------------------------------------------------------------gcacacacacaa--------------------------acacac-----acat--------atatataTA-TAG----------------------------GGAGTGAT------AAA----ATTCACAATTGTCATGGCTAATAAGTAGCACAC--AAATGAC------------------TAAAACCCAG--------------------CTCTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118252 243 - 77216781 gtgtatatatttatgtat-------attaatataatgtg------tgtg-------------tatatatata------cacacacTCAAACATACGTGAGTGTAT-------TGTTCAAAAACTGCAGGCA--CACATATGT------ATGAGTATACATGCCTTT---------------------------ATacacatac----------------------------------------------------------------gcacatacacaaa---------catacatata-tat--acacac-----acac--------acaTATATG-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCGTGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACTCAA--------------------TTATT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031110 243 - 80997621 gtatatatatttatgtat-------attaatataatgtg------tgtg-------------tatatatata------cacacacTCAAACATACGTGAGTGTAT-------TGTTCAAAAACCGCAGGCA--CACATATGT------ATGAGTATACATGCCTTT---------------------------ATacacatac----------------------------------------------------------------gcacatacacaaa---------catacatata-tat--acacac-----acac--------acaTATATG-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCGTGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACCCAA--------------------TTATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087351 245 + 10377808 gtgtatatatttatgtat-------attaatataatgtg------tgtg-------------tatatatata------cacacacTCAAACATACGTGAGTGTAT-------TGTTCAAAAACCGCAGGCA--CACATATGT------ATGAGTATACATGCCTTT---------------------------ATacacatac----------------------------------------------------------------gcacatacacaaa---------catacatata-tatacacacac-----acac--------acaTATATG-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTTGTGGCTAATAAGTAACATGC--AAATGAC------------------CAAAACCCAA--------------------TTATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973118 247 - 8458610 gtgtatatatttatgtat-------attaatataatgtg------tgtg---------tgtatatatatata------cacACACTCAAACATACGTGAGTGTAT-------TGTTCAAAAACTGCAGGCA--CACATATGT------ATGAGTATACACGCCTTT---------------------------ATacacatac----------------------------------------------------------------gcacatacacaaa---------catacatata-tat--acacac-----acac--------acaTATATG-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTCGTGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACTCAA--------------------TTATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917404 239 + 75148670 gtgtatatatttatgtat-------attaatataa--tg------tgtg-------------tatatatata------cacacaGTCAAACATACGTGAGTGTAT-------TGTTCAAAAACCGCAGGCA--CACatatgt------atgagtgtacatgcattt---------------------------atacacatac----------------------------------------------------------------acacatacacaaa---------cat--atata-tat--acacac-----acac--------atatataTA-AAG----------------------------GGAGTGAT------AAA----ATTCATGATTGTCGTGGCTAGTAAGTAACATGC--AAATGAC------------------TAAAACCCAA--------------------TTCTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157423 243 + 4244037 gtgtatatatttatgtat-------attaatataatgtg------tgtg-------------tatatatata------cacacactcaaacatacgtgagtgtat-------tgttcaaaaaCTGCAGGCA--CACATATGT------ATGAGTATACATGCCTTT---------------------------ATacacatat----------------------------------------------------------------gcacatacacaaa---------catacatata-tat--acacac-----acac--------acaTATATG-AAG----------------------------GGAGTGAT------AAA----ATTCACGATTGTTGTGGCTAATAAGTAACATGC--AAATGAC------------------TAAAACCCAA--------------------TTATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180423 249 + 4569836 gtgtatatatttatgtat-------attaatataa--tg------tgtg-------------tatatatata------cacacactcaaacatacgtgagtgtat-------tgttcaaaaaCCGCAGGCA--CACatatgt------atgagtatacatgcattt---------------------------atacacatac----------------------------------------------------------------acacatacacaaa---------catatatata-cac--acacac-----acacatatatatatatataTA-AAG----------------------------GGAGTGAT------AAA----ATTCACGGTTGTCATGGCTAGTAAGTAACATGC--AAATAAC------------------TAAAACCCAA--------------------TTCTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136318 196 - 159171411 gtgtatatatgtatgtat-------attaatataa--tg---------------------------------------------------------tgtgtgtat-------tgttgagaaaccacagacacacaaatattt------atgagtatacatgcatgt---------------------------atgcacatac----------------------------------------------------------------aaacacacaaac--------------------------acacat-----------------atatatata-tag----------------------------ggagtgataa--acaaa----attcatgattgtCATGGCTAATAAGTAACATAC--AAATAA-------------------TAAAACCCAG--------------------TTCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1845966 218 + 3513951 gtgtatatatgtatgcat-------attaatataa--tgtgtgtgtata-------------tacatatata------cacacactcataca----tgtgtgtat-------tgttcagaaaCCACAGACAC-cacatatgt------atgggtatacatgc---------------------------------------ac----------------------------------------------------------------acacacataaac--------------------------acacat-----------------atatgcata-AAT----------------------------GGAGTGATAA--ACAAA----ATTCATGATTGTCGTGGCTAATAAGTAACATAC--AAATAAC------------------TAAAACCCAG--------------------TTCTT i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7011036 225 - 7032639 gtgtatatatgtatgtat-------attaatataa--tg------tgtg-------------tatatacata------cacacactcatacat--gtgtgtatat-------tgttgagaaaccacagacacacacatattt------atgagtatacatgcatgt---------------------------atacacatac----------------------------------------------------------------aaacacacaa----------------------------aCACAT-----------------ATATATATA-AAG----------------------------GGAGTGATAA--ACAAA----ATTCATAATTGTCATGGCTAATAAGTAACATAC--AAATAAC------------------TAAAACCCAG--------------------TTCTT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838502 420 + 28711273 atatacacacacatatataGGGTGGACTTACATAATATA------TATGAAGTTCAACTCTCTTTATATATAAAATTCAAAAAGTTCACACATATATGTATGCATATGCATGAATACACACACCACACACA--CTCAGATGTGGTGCCAAAAATATGCATACAAATTTTAAGAAAGCAAAAAACTATATTAAAATACTCATGTCACATTTGACTTCTGCTATAATAAGAGAAGCAAGATACAATATTCCAGATAACAAATATTATTGGTATATATATAAAATCTGTGTGTATGAATACATTAT--ATACATTATTGGTAT--------ATATATATA-AAAATAAACGTCTCTGTGTGTGTGTGTGTGTGTAGCGAT------AAATGATATTCAGGATAGTcacagctagtaagtaacacac--aaataac------------------taaaacccag--------------------ttctg i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21451524 225 + 61074082 ata-----------gctc-------aaaaacaaca--cc------cata--------------------ata------ca--------------------tgcat-------------------------a--cacatatgt------atgaggatacacacatat---------------------------atgcatacat----------------------------------------------------------------atatatgtacata---------caaatatata------ccttat-----------------gtatgttcacaag----------------------------ggaatgctaaacacaga----atttaagatagCCACAGGGAGTAAGTAACATACAAAAATAACATACAATGTAAATACATATAATATACAAATGGCATATAGAATAGTGGTTTCTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 454818 169 - 852752 ATGTATACATCCAAATAC-------ACAGACATGG----------CATT-------------TAtatatatt-----------------------atgtatgtat-----------------------gta--tatatgtat------atgagtgtgtgtgcatgt---------------------------gtgtaGGGAA----------------------------------------------------------------AGATTAACACAA--------------------------ACTC-------------------A---------AAA------------------------------------------TAA----ATCTaggttagtcacagttagtaagtaacttac--aaagga-------------------tgaaaaccag--------------------gcctg i dasNov3.JH570468 I 286 C 0 e mm10.chr11 22099820 886 - 122082543 I e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M a score=528746.000000 s hg38.chr17_JH159148v1_alt 1974 50 + 88070 TCCAAAG-CCTAGGTTCTGTAT------GGATCATGATATGTCTCAATGTGGTCAC--A s panTro5.chr17 16324160 50 + 83181570 TCCAAAG-CCTAGGTTCTGTAT------GGATCATGATATGTCTCAATGTGGTCAC--A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229046 50 + 83442489 TCCAAAG-CCTAGGTTCTGTAT------GGATCATGATATGTCTCAATGTGGTCAC--A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064618 50 + 4267968 TCCAAAG-CCTAGGTTCTGTAT------GGATCATGATATGTCTCAATGTGGTCAC--A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044463 50 - 2193130 TCCAAAG-CCTAGGTTCTGTAT------GGATCATGATATGTCTCAATGTGGTCAC--A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118495 51 - 77216781 TCCAAAG-CCTAGGTTCTGTGT------GGATCATCATATTTCTCAATGTGGTCAC-AA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031353 51 - 80997621 TCCAAAG-CCTAGGTTCTGTGT------GGATCATCATATTTCTCAATGTGGTCAC-AA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087596 51 + 10377808 TCCAAAG-CCTAGGTTCTGTGT------GGATCATCATATTTCTCAATGTGGTCAC-AA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973365 51 - 8458610 TCCAAAG-CCTAGGTTCTGTGT------GGATCATCATATTTCTCAATGTGGTCAC-AA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917643 51 + 75148670 TCCAAAG-CCTAGGTTCTGTGT------GGATCATTATATTTCTCAATGTGGTCAC-AA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157666 51 + 4244037 TCCAAAG-CCTAGGTTCTGTGT------GGATCATCATATTTCTCAATGTGGTCAC-AA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180672 51 + 4569836 TCCAAAG-CCTAGGTTCTGTGT------GGATCATCATATTTTTCAATGTGGTCAC-AA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136514 53 - 159171411 TCCAAAGCCCTATGTTCTGTAT------GGATCATCGTATTTCTCAGTGTGGTCACAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846184 51 + 3513951 TCCAAAG-CCTATGTTCTGTAT------GGATCATCATATTTCTCAGTGTGGTCAC-AA i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7011261 51 - 7032639 TCCAAAG-CCTATGTTCTGTAT------GGACCATCATATTTCTCAGTGTGGTCAC-AA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838922 49 + 28711273 tccaaag-tct--gtTTTTAAT------GAATCACCGTATTTCTTGATGTGGTTGC-AA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22100706 57 - 122082543 tcgaaat-gctgagtcctgtctcccgccccATGACTGTATCTCTTGCTGTAGTCAC-GC i mm10.chr11 I 886 C 0 s canFam3.chr9 21451749 50 + 61074082 TCCAAAG-TTTGTGTTTTTTTA------TGATCATCATGTTTTTTGATGTGATCAC-A- i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 454987 49 - 852752 tccaaag-cctgtgatttttgt------gcatcatcacattTTTTGATGTGGTCAT--- i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M a score=34300.000000 s hg38.chr17_JH159148v1_alt 2024 3 + 88070 GGT s panTro5.chr17 16324210 3 + 83181570 GGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229096 3 + 83442489 GGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064668 3 + 4267968 GGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044513 3 - 2193130 GGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118546 3 - 77216781 GGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031404 3 - 80997621 GGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087647 3 + 10377808 GGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973416 3 - 8458610 GGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917694 3 + 75148670 GGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157717 3 + 4244037 GGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180723 3 + 4569836 GGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136567 3 - 159171411 GGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846235 3 + 3513951 GGT i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7011312 3 - 7032639 GGT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838971 3 + 28711273 GAT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22100763 3 - 122082543 AAT i mm10.chr11 C 0 C 0 s dasNov3.JH570468 455036 3 - 852752 GAC i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M e canFam3.chr9 21451799 3 + 61074082 I a score=751980.000000 s hg38.chr17_JH159148v1_alt 2027 71 + 88070 GTCTTTG-TT-GATACACTAGGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGA------TGTT-------CTTGCTATTAAGAG s panTro5.chr17 16324213 71 + 83181570 GTCTTTG-TT-GATACACTAGGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGA------TGTT-------CTTGCTATTGAGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229099 71 + 83442489 GTCTTTG-TT-GATACACTAGGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGA------TGTT-------CTTGCTATTGAGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064671 71 + 4267968 GTCTTTG-TT-GATACACTAGGCATTTTTAGTGCCTTGAACTACAGCAA---GACAGA------TGTT-------CTTGCTATTGAGAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044516 71 - 2193130 GTCTTTG-TT-GATATACTAGGTGCTTTTAGTGCCTTGAACTACAGCAA---GACAGG------TGTT-------CTTGCTATTGAGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118549 71 - 77216781 GTCTTTG-TT-GATACACTGCATGTTTTTAGTGCCTTGAACTACAGCAA---GACAGC------TGTT-------CTTGCGATTGAGAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031407 71 - 80997621 GTCTTTG-TT-GATACACTGCGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGC------TGTT-------CTTGCGATTGAGAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087650 71 + 10377808 GTCTTTG-TT-GATACACTGCGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGC------TGTT-------CTTGCGATTGAGAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973419 71 - 8458610 GTCTTTG-TT-GATACACTTCGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGC------TGTT-------CTTGCGATTGAGAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917697 71 + 75148670 GTCTTTG-TT-GATACAGTGGGTGTTTTTAGTGCCTTGAACTATAGCAA---GACAGT------TGTT-------CTTGTGATTGAGAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157720 71 + 4244037 GTCTTTG-TT-GATACACTGCGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGC------TGTT-------CTTGCGATTGAGAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180726 71 + 4569836 GTCTTTG-TT-GATACACTGGGTGTTTTTAGTGCCTTGAACTACAGCAA---GACAGC------TGTT-------CTTGCGATTGAGAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136570 77 - 159171411 GTCTTTG-AT-GGTACACTAGGTGTTTTTAATGCCTTGAACTACAGCAA---GGTGGA------TGCTGGATGC-CTTGCTATTGAGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846238 78 + 3513951 GTCTTTG-TT-GGTACACTAGGTGTTTTTAGTGCCTTGAACTACAGCAA---GATGGA------AGTCGGATGCTCTCGCTATTGAGAG i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7011315 78 - 7032639 GTCTTTG-TC-GGTACACTAGGTGTTTTTAATGCCTTGAACTACAGCAA---GATGGA------TGTTGGATGTTCTCGCTATTGAGAG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22838974 72 + 28711273 GTCTTTG-GTAGATTCACTAGGTGTCTTTAGTGCTTTGAATCACAGCAA---AATGGA------TATT-------CTCTCTATTGAGAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22100766 81 - 122082543 GCCTTGGAAT-GATGTTGCAGGTGTCTTCAGAGCCTTTAATCACATTAAGTTGATAGAAAATATTTTT-------TTCTCAACTGGGGT i mm10.chr11 C 0 C 0 s canFam3.chr9 21451802 71 + 61074082 GCCCTTG-GT-GATACACTAGATGTGTTTAGTGCCGTGAACCACAGCAA---AATGAA------AGGT-------GTCACTATTTAGAG i canFam3.chr9 I 3 I 324 s dasNov3.JH570468 455039 67 - 852752 AGCCTTG-GT-GATACTCTAGATGTCCTTAGATCCTTGAGTGACAGCAA---AGTAGA------TCTT-------CT----ATTGATAG i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M a score=91933.000000 s hg38.chr17_JH159148v1_alt 2098 8 + 88070 TTTCCTTT s panTro5.chr17 16324284 8 + 83181570 TTTCCTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229170 8 + 83442489 TTTCCTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064742 8 + 4267968 TTTCCTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044587 8 - 2193130 TTTCCTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118620 8 - 77216781 GTTCCTTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031478 8 - 80997621 GTTCCTTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087721 8 + 10377808 GTTCCTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973490 8 - 8458610 GTTCCTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917768 8 + 75148670 GTTCCTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157791 8 + 4244037 GTTCCTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180797 8 + 4569836 GTTCCTTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136647 8 - 159171411 GTTCCTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846316 8 + 3513951 GCTCCTTT i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7011393 8 - 7032639 GCTCCTTG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22839046 8 + 28711273 GTTCCTTT i otoGar3.GL873537 C 0 I 543 s mm10.chr11 22100847 8 - 122082543 ATTTTATT i mm10.chr11 C 0 I 4 s canFam3.chr9 21452197 8 + 61074082 GTTTCTTT i canFam3.chr9 I 324 C 0 s dasNov3.JH570468 455106 8 - 852752 GTTTCTTT i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M a score=591631.000000 s hg38.chr17_JH159148v1_alt 2106 47 + 88070 AGGAGAAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGT s panTro5.chr17 16324292 47 + 83181570 AGGAAAAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATTGATGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229178 47 + 83442489 AGGAAAAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATTGATGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064750 47 + 4267968 AGGAGAAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044595 47 - 2193130 AGGAGAAAAGAAAACAAGAACAGAATCACTTAGAGAAAAATGGATGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118628 47 - 77216781 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031486 47 - 80997621 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087729 47 + 10377808 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973498 47 - 8458610 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917776 47 + 75148670 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157799 47 + 4244037 AGGAGGAAAGAAAACAAGAGCAGAATCACTTACAGAAAAATGGATGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180805 47 + 4569836 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATAGATGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136655 47 - 159171411 AGGAGGAAAGAAAACAAGAGCAGAATCACTTAGAGAAAAATGGATGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846324 47 + 3513951 AGGAGGAAAGGAAACAAGAGCAGAATCACTTAGAGAAAAACAAATGT i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7011401 47 - 7032639 AGGAGGAAAGAAAACAAGAGCAGAACCACTTAGAGAAAAATGGAAGT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22839597 47 + 28711273 aagaggaaaggaatGAAGAGCGGAATCATGAAGAGAAAAATAGATGT i otoGar3.GL873537 I 543 I 2 s mm10.chr11 22100859 46 - 122082543 AAGAAAAAA-AAAGTAAAAGCAAAATCAGTTGGAGAAAAACAGACAA i mm10.chr11 I 4 C 0 s canFam3.chr9 21452205 43 + 61074082 AGGAGGAAGAAAGACAAGAACAGAATCA----GAGAAAAATGGATCT i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 455114 47 - 852752 AAGAAGAAAAGAAACAAGAACAGAATCCCTTAGAgaaaaatggatgg i dasNov3.JH570468 C 0 I 13 e cebCap1.NW_016107730v1 1894247 3165 + 1920343 M a score=293441.000000 s hg38.chr17_JH159148v1_alt 2153 23 + 88070 AGAATGGATTGCTTTAAAACTAT s panTro5.chr17 16324339 23 + 83181570 AGAATGGATTGCTTTAAAACTAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229225 23 + 83442489 AGAATGGATTGCTTTAAAACTAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064797 23 + 4267968 AGAATGGATTGCTTTAAAACTAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044642 23 - 2193130 AGAATGGATTGCTTTAAAACTAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118675 23 - 77216781 AGAATGGATTGCTTTAAAACTAT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031533 23 - 80997621 AGAATGGATTGCTTTAAAACTAT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087776 23 + 10377808 AGAATGGATTGCTTTAAAACTAT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973545 23 - 8458610 AGAATGGATTGCTTTAAAACTAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917823 23 + 75148670 AGAATGGATTGCTTTAAAACTAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157846 23 + 4244037 AGAATGGATTGCTTTAAAACTAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180852 23 + 4569836 AGAATGGATTGCTTTAAAACTAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136702 23 - 159171411 AGAATGAATTGCTTTAAGACTAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846371 23 + 3513951 AGAACGGATTGCTTTAAGACTAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1897492 23 + 1920343 AGAATGGATAGCTTTAAGACTAC i cebCap1.NW_016107730v1 M 3165 C 0 s aotNan1.NW_018502359v1 7011448 23 - 7032639 AGAATGGATTGCTTTAAGACTAC i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22839646 23 + 28711273 AAAATTAACTGCTTTAGAACTAT i otoGar3.GL873537 I 2 C 0 s mm10.chr11 22100905 21 - 122082543 GAAATGAA--GCTTTCTGTTGAT i mm10.chr11 C 0 I 5 s canFam3.chr9 21452249 23 + 61074082 AAAATGGATTGTTTTAAAACAAT i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 455174 20 - 852752 aaaatggatTGCTTAACATA--- i dasNov3.JH570468 I 13 C 0 a score=1788980.000000 s hg38.chr17_JH159148v1_alt 2176 161 + 88070 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAAACATGCTCATG-TTCCCAGTTTGATTGACATATTTGGTAAGACTGAAAGTATTAAATACATC-CTCTGGGAAGATGAAGAGCTTTGGGG-GTAAATAT-TCAGCAATAAAACACAGTGCA s panTro5.chr17 16324362 161 + 83181570 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAATTGATGTG-ATTTTTCAAATATGCTCATG-TTCTCAGTTTGATTGACATATTTGGTAAGACTGAAAGTATTAAATACATC-CTCTGGGAAGATGAAGAGCTTTGGGG-GTAAATAT-TCAGCAATAAAACACAGTGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229248 161 + 83442489 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAAATATGCTCATG-TTCTCAGTTTGATTGACATATTTGGTAAGACTGAAAGTATTAAATACATC-CTCTGGGAAGATGAAGAGCTTTGGGG-GTAAATAT-TCAGCAATAAAACACAGTGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064820 161 + 4267968 AAAAGT-----G-GTAT----------GGGATACTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAAATATGCTCATG-TTCCCAGTTTGATTGACATATTTGGTAAGACTGAAAGTATTAAATACATC-CTCTGGGAAGATGAAGAGCTTTGGGG-GTAAATAT-TCAGCAATAAAACACAGTGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044665 163 - 2193130 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTATATTTTTCAAATATACTCATG-TTCCCATTTTGATTGACATATTTGGTAACACTGAAAGTATTAAATACTTC-CTCTGGGAAGATGAAGAGTTTTGGGGTGTAAATAT-TCAGCAATAAAATGCAGTGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118698 162 - 77216781 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAATTATACTCATG-TTCCCATTTTGATTGACATATTTAGTAAGACTGAAAGTATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATAAAACACAGTGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031556 162 - 80997621 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAATTATACTCATG-TTCCCATTTTGATTGACATATTTAGTAAGACTGAAAGTATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATAAACCACAGTGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087799 162 + 10377808 AAAAGT-----G-GTAT----------AGGGTATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAATTATACTCATG-TTCCCATTTTGATTGACATATTTAGTAAGACTGAAAGTATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATGT-TCAGCAATAAACCACAGTGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973568 162 - 8458610 AAAGGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAATTATACTCATG-TTCCCATTTTGATTGACATATTTAGTAAGACTGAAAGTATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATAAACCACAGTGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64917846 162 + 75148670 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATATG-ATTTTTCAGTTATACTCATG-TTCCCATTTTGATTGACATATTTGGTAAGACTGAAAGCATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATAAAACACAGTGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2157869 162 + 4244037 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAATTATACTCATG-TTCCCATTTTGATTGACATATTTAGTAAGACTGAAAGTATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATAAAACACAGTGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2180875 162 + 4569836 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ACTGAAGTTGATGTG-ATTTTTCAATTACACTCATG-TTCCCATTTTGATTGACATATTTGGTAAGACTGAAAGTATTAAATACTTC-CTTTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATAAAACACAGTGCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136725 162 - 159171411 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ATTGAAGTTGATGTG-ATTTTTCAAATATACTCATG-TTCCCATTTTGATTGACATATTTGGTAAGACCAAACGTATTAAATCCTTC-CTCTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TTAGCAATGAAACCCAGTGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846394 158 + 3513951 AAAAGT-----G-GCAT----------AGGATATTG------------G-------ATTGAAGTTGATGTG-ATTTTTCAAATATGCCTATG-TTCCCATTTTGATTGACATATTTGGTAAGACCAAATGTATTAAATGTTTC-CTCTGGAA----GATGAGCTTTGGGGTGTAAATAT-TCAGCAACGAAACCCAGTGCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1897515 162 + 1920343 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ATTGAAGTTGATGTG-ATTTTtcaaatatattcacg-ttcccatgttgattgacatatttggtaagaccaaaagtACTAAATCCTTC-CTCTGGGAAGATGAAGAGCTTTGGGGTGTGAATAT-TCAGCAATGAAACCCAGTGCA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7011471 143 - 7032639 AAAAGT-----G-GTAT----------AGGATATTG------------G-------ATTGAAGTTGATGTG-ATTTTTCAAATATACTCATG-TTCTCA-------------------TAAGACCAAACGTATTAAATCCTTC-CTCTGGGAAGATGAAGAGCTTTGGGGTGTAAATAT-TCAGCAATGAAACCCAGTGCA i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22100931 166 - 122082543 AGGGGTGGCCCG-GCAC----------GGAATTTCA------------GTTTTCAAACTCAAATTGATGTC-CTATTTCAAGTATTTGTATGTTTCTTATTCTGGTTGACTTCTTTGGTGAG---------ATTAAATATCTCTCTCTCGGGGGATAAAGAACTTTGGG--GTAAACATATCAGAATTATAGGGGTGTGCA i mm10.chr11 I 5 I 628 s canFam3.chr9 21452272 175 + 61074082 AAAAGT-----G-GTATGTATGAATACAGGACATTGACACCCTTTTCAG-------GTTGAAGTTGAAATA-GTTTCTCAAATATATCCATA-TTCCCAGTATGATTGACTTATATGACAAGACCAAAAGTAT--------TT-CTTTTGAAAGATGAA-AGCTTTGGGTTATAGACAG-TCAAGAACAGAACAGACTGCA i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 455194 167 - 852752 AAAAGC-----GAGTGT----------AGTGTATTGGCACCTTTTCCAG-------ACTGAAGTCAACATG-GTTCTTTAAATATAATCATG-TTTCAATATTGATTGACCTGTTT-GTAAAATAAAATTTATT-------TA-TTCTTGGGAGATAAAGAGCATTTGGAGATAGATAT-TCTGGAATAAAATGTTATGCA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22839669 0 + 28711273 C a score=55893.000000 s hg38.chr17_JH159148v1_alt 2337 7 + 88070 TGGATTC- s panTro5.chr17 16324523 7 + 83181570 TGGATTC- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229409 7 + 83442489 TGGATTC- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064981 7 + 4267968 TGGATTC- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044828 7 - 2193130 ATAAAAC- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118860 7 - 77216781 TGGATTC- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031718 7 - 80997621 TGGATTC- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087961 7 + 10377808 TGGATTC- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973730 7 - 8458610 TGGATTC- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64918008 7 + 75148670 TGGATTC- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2158031 7 + 4244037 TGGATTC- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2181037 7 + 4569836 TGGATTC- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136887 7 - 159171411 TGGATTC- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1846552 7 + 3513951 TGGATTC- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1897677 7 + 1920343 TGGATTC- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7011614 7 - 7032639 TGGATTC- i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 21452448 6 + 61074082 TGGTCC-- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 455361 7 - 852752 -GGGCTCT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22101097 628 - 122082543 I e otoGar3.GL873537 22839669 0 + 28711273 C a score=2860515.000000 s hg38.chr17_JH159148v1_alt 2344 249 + 88070 CTGCAGATTGAAAGATGCCAACATGAATACAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAACTGTGGGGAA---AAAGGCATTTCAATGGCAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAATG-TTTCTCTTCTTTTTAAAATGGAGGT---GAAGAGGGTGCCAAGGAGAAGGCATTTTGTAGC------TGGGGGTTTGCAAAGTACCCTTCAGCGTTTTCAGTATTTTCAA s panTro5.chr17 16324530 249 + 83181570 CTGCAGATTGAAAGATGCCAACATGAATACAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAACTGTGGGGAA---AAAGGCATTTCAATGGCAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAATG-TTTCTCTTCTTTTTAAAATGGAGGT---GAGGAGGGTGCCAAGGAGAAGGCATTTTGTAGC------TGGGGGTTTGCAAAGTACCCTTCAGCGTTTTCAGTATTTTCAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229416 249 + 83442489 CTGCAGATTGAAAGATGCCAACATGAATACAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAACTGTGGGGAA---AAAGGCATTTCAATGGCAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAATG-TTTCTCTTCTTTTTAAAATGGAGGT---GAGGAGGGTGCCAAGGAGAAGGCATTTTGTAGC------TGGGGGTTTGCAAAGTACCCTTCAGCGTTTTCAGTATTTTCAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4064988 248 + 4267968 CTGCAGACTGAAAGATGCCAACATGAATACAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACACAGAAACCAACTGTGGGGAA---AAAGGCATTTCAATGGCA-GGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAATG-TTTCTCTTCTTTTTAAAATGGAGGT---GAGGAGGGTGCCAAGGAGAAGGCATTTTGTAGC------TGGGGGTTTGCAAAGCACCCTTCAGCGTTTTCAGTATTTTCAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2044835 247 - 2193130 --GCAGATTGAAAGATGCCAACATGAATACAGACAAGAAGGAGGGCAAAAGAAGTGATCCACGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGCGTTCCAATGGCAGGGGAGAAGG-TTTTCCAGACG-TTGTTCTCATCAAAAATG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCATTTTGTAGC------TGGGGGTTTGCAAAGTACCCTTCAGCGTTTTCAGTATTTTCAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30118867 249 - 77216781 TTGCAGATTGAAAGATGCCAACATGAATAGAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGCGTTTCAATGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCGTTTTGTAGC------TGGGGGTTTGCAAAGTACCCTCCAGCGTTTCCAGTATTTTCAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031725 249 - 80997621 TTGCAGATTGAAAGATGCCAACATGAATAGAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGCGTTTCAATGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCGTTTTGTAGC------TGGGGGTTTGCAAAGTACCCTCCAGCGTTTCCAGTATTTTCAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2087968 249 + 10377808 TTGCAGATTGAAAGATGCCAACATGAATAGAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGCGTTTCAATGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCGTTTTGTAGC------TGGGGGTTTGCAAAGTACCCTCCAGCGTTTCCAGTATTTTCAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973737 249 - 8458610 TTGCAGATTGAAAGATGCCAACATGAATAGAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGCGTTTCAATGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCGTTTTGTAGC------TGGGAGTTTGCAAAGTACCCTCCAGTGTTTCCAGTATTTTCAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64918015 249 + 75148670 CTGCAGATTGAAAGATGCCAACATGAGTAGAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGCATTTCAATGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACA-TTGCTCTTCTTTTTGAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCATTTTGTAGC------TGGGGGTTTGCAAAGTACCCTCCAGTGTTTCCAGTATTTTCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2158038 249 + 4244037 CTGCAGATTGAAAGATGCCAACATGAATAGAGACAAGAAGGAGGGCAAAAGAAGTGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGTGTTTCAATGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGGAGAAGGCGTTTTGTAGC------TGGGGGTTTGCAAAGTACCCTCCAGCGTTTCCAGTATTTTCAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2181044 249 + 4569836 CTGCAGATTGAAAGATGCCAACATGAATAGAGACAAGAAGGAGGGCAAAAGAAATGATCCATGGTGTGACATAGAAACCAATTGTGGGGAA---AAAGGTGTTTCAAAGACAGGGGAGAAGG-TTTTCCAGACA-TTGTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCAAAGGAGAAGGCATTTTGTGGC------TGGGGGTTTGCAAAGTACCCTCCAGTGTTTCCAGTATTTTCAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46136894 255 - 159171411 CAGCAGACTGAAAGATGGCAACATGAATAGAGACAAGAAGGAGGGCTGAAGAAGTCATCCATGGTATGACATAGAAACCAACTGTGGGGGA---AAAGGTGTTTCAGTGTCAACAGGGAAGA-TTTTCCAGACA-TTTTTCTGATCAAAAACG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGGGGGTGCCAAGAAGAAAGCATTTTGTAGCTGTAGTTGATGGTTTGCAAAGTACCCTCCAGCATTTCCAGCATTTTCAA i calJac3.chr5 C 0 I 2 s saiBol1.JH378271 1846559 255 + 3513951 CTGCAGATTGAAAGATGGCAACATGAATAGAAACAAGAAGGAGGGCCGAAGAAGTCATCCATGGCATGACATAGAAACCAACTGTGGGGAA---AAAGGTGGTTCAGTGACAACGGGAAAGA-TTTTCCAGACA-TTTTTCTGACCAAAAATG-TTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGAAGAAGGCATTTTGTAGCTAGAGCTGGTGATTTGCAAATTACCCTCCAGCGTTTCCAGCATTTTCAA i saiBol1.JH378271 C 0 I 2 s cebCap1.NW_016107730v1 1897684 256 + 1920343 CTGCAGACTGAAAGATGGCAACATGAATAGAGAGAAGAAGGTGGGCTGAAGAAGTCATCCATGGCATGACATAGAAACCAACTGCGGGGAA---AAAGGTGTTTCAGTGACAACAGGGAAGA-TTTTCCAGACATTTTTTCTGATCAAAGACG-TTTCTCTTCTTTTTAAAACGAGGGT---GAGGAGGGTGCTAAGAAGAAGGCATTTTGTAGCTGTAGTTGGTGGTTTGCAGATTACCCTCCAGCGTTTCCAGCATTTTCAA i cebCap1.NW_016107730v1 C 0 I 32 s aotNan1.NW_018502359v1 7011621 251 - 7032639 CTGCAGATTGAAAGATGGCAACATGAATAGAAACAAGAAGGAGGGCCGGAGAAGTCATCCATG------CATAGAAACCAACCGTGGGGAA---AAAGGTGCTTCAGTGACAACAGGGAAGACTTTTCCAGACA-TTGTTCTGATCAAAAACGTTTTCTCTTCTTTTTAAAATGAGGGT---GAGGAGGGTGCCAAGAAGAAGGTATTTTGTAGCTGTAGCTGCTGGTTTGCAAAGTACCCTCCAGCGTTTCCAGCATTTTCAA i aotNan1.NW_018502359v1 C 0 I 23 s mm10.chr11 22101725 246 - 122082543 CTGCAGTTTTAAAGATGACAGAATGAG--AGTGTGAGGAGGAGGGAGCCAGGAGCCATCCACAGCATGATGGAAAGA-CAGTGGTAGAGAA-GGAAGGGCTCTTTAATGACCAGGGAGAGTG-CCTGCCAGGCG-TGGCTCTCCCCAGGA--G-TTTGTCTTCTTTCAGAACAGGGGTA---GAAGAGAGAGCCAAAGAGACAAGACTCCACAGC------TGCTCCCTTGCCTAGTCCCTTCCAGAATCTCCAGCTATTTCAT i mm10.chr11 I 628 C 0 s canFam3.chr9 21452454 248 + 61074082 CTGCTGTTTGCAAGGTGCGAA-ATTATTAGTGATAAGTTGGATGGCAAAAGGAGTGATTGGTGCTGTAACACAAATGGCAATGGTAGAAAAAAAAAAGGTACTTTAATGACAAGGGTTAGGA-TTTCCCAGGCA-TCATTCTGATCA-------CTTCTTTTCCTTTTAAAATGAGGGTGAGGAGGAGGGTGCCAAGGAGCAGGTATTCTTTAGC------TGGTACTTTGAAATGTACCTTCCAGAATTTCCAGCATTTTCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 455368 225 - 852752 CTGTTGCTGGCAAGCTGCCATAATCAA-ACAGACACAATGGAAGGCAGAAATA------------CTGACATAAAAAACAATTCCAGAGAA----AAGGTATTTTAATGA-AAAGGGGAGGA-TTTTCCAGGCA-CTGTTCAGATCAAAAAAG-TTTCTCTTCTTT-------GAGGAT---AAAGAAGGTGCCAAAGAGAAAGCATTTTGTAGC------TGGTACTTTGAAAATT--TTTCCAGAATCCCCAGCATTTTCAA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22839669 0 + 28711273 C a score=154795.000000 s hg38.chr17_JH159148v1_alt 2593 22 + 88070 TAATTTGTGAAGCAACCAAAGC s panTro5.chr17 16324779 22 + 83181570 TAATTTGTGAAGCAACCAAAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229665 22 + 83442489 TAATTTGTGAAGCAACCAAAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4065236 22 + 4267968 TAATTTGTGAAGCAACCAAAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045082 22 - 2193130 TAATTTGTGAAGCAACCAAAAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119116 22 - 77216781 TAATTTGTGAAGCAACCAAAAC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031974 22 - 80997621 TAATTTGTGAAGCAACCAAAAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2088217 22 + 10377808 TAATTTGTGAAGCAACCAAAAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1973986 22 - 8458610 TAATTTGTGAAGCAACCAAAAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64918264 22 + 75148670 TAATTTGTGAAGCAACCAAAAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2158287 22 + 4244037 TAATTTGTGAAGCAACCAAAAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2181293 22 + 4569836 TAATTTGTGAAGCAACCAAAAC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46137151 20 - 159171411 CAACC--AGAaaaaacaaaaac i calJac3.chr5 I 2 C 0 s saiBol1.JH378271 1846816 20 + 3513951 CAATC--AGaaaaaaaaaaaac i saiBol1.JH378271 I 2 C 0 s mm10.chr11 22101971 20 - 122082543 CTGTTTCGGAAGCAGCTGAG-- i mm10.chr11 C 0 C 0 s canFam3.chr9 21452702 21 + 61074082 TAATTT-TGAGGCAGCTAATAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 455593 22 - 852752 TAATTTATGAGACAGACAATAA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7011872 23 - 7032639 I e cebCap1.NW_016107730v1 1897940 32 + 1920343 I e otoGar3.GL873537 22839669 0 + 28711273 C a score=35176.000000 s hg38.chr17_JH159148v1_alt 2615 3 + 88070 AAA s panTro5.chr17 16324801 3 + 83181570 AAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229687 3 + 83442489 AAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4065258 3 + 4267968 AAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045104 3 - 2193130 AAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119138 3 - 77216781 AAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031996 3 - 80997621 AAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2088239 3 + 10377808 AAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1974008 3 - 8458610 AAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64918286 3 + 75148670 AAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2158309 3 + 4244037 AAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2181315 3 + 4569836 AAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46137171 3 - 159171411 aaa i calJac3.chr5 C 0 I 2 s saiBol1.JH378271 1846836 3 + 3513951 aaa i saiBol1.JH378271 C 0 I 19 s aotNan1.NW_018502359v1 7011895 3 - 7032639 aaa i aotNan1.NW_018502359v1 I 23 C 0 s canFam3.chr9 21452723 3 + 61074082 AAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 455615 3 - 852752 GAA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22101991 0 - 122082543 C e cebCap1.NW_016107730v1 1897940 32 + 1920343 I e otoGar3.GL873537 22839669 0 + 28711273 C a score=2927767.000000 s hg38.chr17_JH159148v1_alt 2618 266 + 88070 CAAACACCCACAAAAAACTAACCTGAGACATGACAACGc----agttgatgaaatcgccatactttgaagacttaggtaattagctaacatattcaacagaatgagttagtggcagagccagaaatcaaggccagccccatctggctccccacaccgtga--tctttccactccgtcatgtgcctcCAGCGTGAACC-GGCCAGAACGTTGGCTGGTGTAGAACACCGGACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCGGAGGAAAAGC s panTro5.chr17 16324804 266 + 83181570 CAAACACCCACAAAAAACTAACCTGAGACATGGCAACGc----agttgatgaaatcgccatactctgaagacttaggtaattagctaacacattcaacagaatgagttagtggcagagccagaaatcaaggccagccccatctggctccccacaccgtga--tctttgcactctgtcatgtgcctcCAGCGTGAACC-GGCCAGAACGTTGGCTGGTGTAGAACACCGGACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCGGAGGAAAAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229690 266 + 83442489 CAAACACCCACAAAAAACTAACCTGAGACATGGCAACGc----agttgatgaaatcgccatactctgaagacttaggtaattagctaacacattcaacagaatgagttagtggcagagccagaaatcaaggccagccccatctggctccccacaccgtga--tctttgcactctgtcatgtgcctcCAGCGTGAACC-GGCCAGAACGTTGGCTGGTGTAGAACACCGGACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCGGAGGAAAAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4065261 265 + 4267968 CAAACACCCTCAAAAAACTAACCTGAGACATGGCAAtgc----agttgatgaaatcgccatactttgaagacttaggtaattagctaacacattcaacagaatgagttagtggcagagccagaaatcaaggccagccccatctggctccccacaccgtga--tctttccactccgtcatgtgcct-cAGCGTGAACT-GGCCAGAACGTTGGCTGGTGTAGAACACCGGACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCGGAGGAAAAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045107 267 - 2193130 CAAACACCCACAAAAAACTAACCTGAGACACGGCAACGC----AGTTGATGAAATCGCCATACTTTGAAGACTTAGGTAATTATCTAACACATCCAACAGACTGagttagtggcagagccagaaatcaaggccagccccatctggctccccacaccgtga--tctttccactccgtcatgtgcctcCAGCATGAACCAGGCCAGGACGTTGGCTGGTGTAGAACACTGGACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCGGAGGAAAAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119141 266 - 77216781 CAAACACCCATAAAAAAAGAATCTGAGACACGGCAATGC----AGTTGATGAAATCGCCGTACTTTGGAGACTTAGGTAAATAGCTAACACATCCAACAGACTGagttagtggcagacccagaaatcaaggccagccccatctggctccccgcaccatga--tctttccactccgtcatgcg-ctccAGCATGAACCAGGCCAGGACGTTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28031999 266 - 80997621 CAAACACCCATAAAAAAAGAATCTGAGACACGGCAAtgc----agttgatgaaatcgccgtactttggagacttaggtaaatagctaacacatccaacagactgagttagtggcagacccagaaatcaaggccagccccatctggctccccgcaccatga--tctttccactccgtcatgcg-ctccAGCATGAACCAGGCCAGGACGTTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2088242 266 + 10377808 CAAACACCCATAAAAAAAGAATCTGAGACACGGCAAtgc----agttgatgaaatcgccgtactttggagacttaggtaaatagctaacacatccaacagactgagttagtggcagacccagaaatcaaggccagccccatctggctccccgcaccatga--tctttccactccgtcatgcg-ctccAGCATGAACCAGGCCAGGACGTTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1974011 266 - 8458610 CAAACACCCATAAAAAATGAATCTGAGACATGGTAATGC----AGTTGATGAAATCGCCGTACTTTGAAGACTTAGGTAAATAGCTAACAAATCCAACAGACTGagttagtggcagacccagaaatcaaggccagccccatctggctcaccacactgtga--tctttccactccgtcatgcg-ctccAGCATGAACCAGGCCAGGACGTTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64918289 265 + 75148670 CAAACACCCATAAAAAACGAATCTGAGACACGGCAAtgc----agttgatgaaattgccatactttgaagacttaggtaattagctaacacatccaacaga-tgagttagtggcagacccagaaatcaaggccagccccatctggctccccacaccatga--tctttccactccgtcatgcg-ctccAGTATGAACCAGACCAGGACATTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2158312 266 + 4244037 CAAACACCCATAAAAAACGAATCTGAGACACGGCAAtgc----agttgatgaaatcgccgtactttgaagacttaggtaaatagctaacacatccaacagactgagttagtggcagacccagaaatcaaggccagccccatctggctccccacactgtga--tctttccactccgtcatgcA-CTCCAGCATGAACCAGGCCAGGACGTTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2181318 267 + 4569836 CAAACACCCACAAAAAACGAATCTGAGACACGGCAAtgc----agttgatgaaatcgccatactttgaagacttaggtaattagctaacacatccaacagactgagttagtggcagacccagaaatcaaggccagccccatctggctccccataccgtga--tctttccactccatcatgcgcctcCAGCATGAACCAGGCCAAGACATTGGCTGGTGTAGAACACTGGACCTGGCTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAAC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46137176 267 - 159171411 caaaaaACCAACAGCAACTAACCTGAAACATGGCAAGGC----AGTTGATGAGATCTTTATACTTTGAAGACTTAGGTAATTAGCTAACACATCCAACAGACTGagttagtggcagggccagaaatcaaggccagtcccatctggccatctgaaccatga--tctttccattctgtcatgcgcctcCTGCATTAACCAGGTCAGGACGTGGGCTGGTGTAGAACACTGGACCTGGTTAGTGATGTGG-AGCCGGGACAAGCCCAGAGGAAAAGC i calJac3.chr5 I 2 C 0 s saiBol1.JH378271 1846858 264 + 3513951 caaaaaaCCAACAACAACTAACCTGAAACATGGCAAGGC----AGTTGATGA-ATCTCCATTCTTTGAAGACTTAGGTAATTCGCTAACACATCCAACAGACTGCgttagtggcaaagccagaaaccaaggccagtcctgtctggctccccgaactgtga--tctttccattctgtcatgcgcctcctGCATGAACCAGGTCAGGATGTGGGCTGGTGTAGAACAT--GACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i saiBol1.JH378271 I 19 C 0 s cebCap1.NW_016107730v1 1897972 267 + 1920343 caaaaaTCCAACAGcaactaacctgaaacatggcaaggc----aggtgatgaaatctccatactttgaagacttaggtaattagctaacacatccaacagactgagttagtggcagagccagaaatcaaggccagtcccgtctggctccctgaaccgtga--tctttccattgtgtcatgtgcctcCTGCATGAACCAGGTCAGGACGTGGGCTGGTGTAGAACACTGGACCTGGTTGGTGATGCGG-AGCCAGGACAAGCCCAGAGGAAAAGC i cebCap1.NW_016107730v1 I 32 C 0 s aotNan1.NW_018502359v1 7011898 267 - 7032639 caaaaaaccaatagcaactaacctgaaacaTGGCAAGGC----AGTTGATGAAATCTCCATACTTTGAAGACttaggtaattagctaacacatccaacagactgagttagtggcagagccagaaatcaaggccagtcccgtctggctccccaaactgtga--tctttccattctgtcatgcgcctcctGCATTAACCAGGTCAGGATGTGGGCTGGTGTAGAACACTGGACCTGGTTGGTGATGTGG-AGCCAGGACAAGCCCAGAGGAAAAGC i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22101991 237 - 122082543 -----------------TTAACCCAAGAAACATCAAGGC----ACCTTAGGATGTCCTGGTACTTTGAAGATGTAGGTAATGAGCCATCCTGTTCCACCGAATGAGCT----GCAAATCCAGG---------CAGCCCTGCCTGCCGATCCACACCAGCA--TCCTTCCATTCCATCGCAAG-TCTTAGCAGGAACCAGGCCAGGACATGCACTTGCGTGGGATGCTGGAATCAGTCGGTGGTGCAGCCGCCCACTTGAGCCCAGAGGAAAAAG i mm10.chr11 C 0 C 0 s canFam3.chr9 21452726 257 + 61074082 ------------TAAAAATAACCTGAGCAACAGCAATGCAGTGAGTTGGTAAACTCTCAGTACTTTGCATACTTGGGTAATGAGCTAACAAGTCCcacagagtgagttagtagcagagccagaaaatgacaccagccctgttgtgatcccaaggccaaga--tttttcTGTTTTGCTGTGAATCTTTGGTGTGAACCAGGTTAGGACAGGGTCGGGTGTGAGATGCTGAAGTTGGC-GGTGATGCAG-AGCCAGGATGAGCCCAGAAAAGGGG- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 455618 235 - 852752 CAAAAAT-------------AGTTGAGCATTAGCAATGA----GGTTGATGAAATAAC-----------------AGTAAttagctaacttgtccaacagagtaagttgttcacagacccaaaatttaagatcaatccttcctggatcccaaaaccatgatttttttccacctcatcatgTATGTTCA-CACGAACCAGGCCTGGTAGTGGACAGATGTGTGAC---GAAGCTAATTGGTGATGCAG-GGCCAGCCCATGCCCAGAGGAAGAGG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22839669 0 + 28711273 C a score=5657897.000000 s hg38.chr17_JH159148v1_alt 2884 517 + 88070 AG-AAGGGCCAAGAA----AGTCCCTCACGAATTCCTCTTGGAAGGGATTGGTTTAACATTAACACCACTTTACAGTGA------TTTTTTTTATTATCACTGCTGGC----GTGTTTTTAT-TTGTATAGAATTCATATGCTATTGAT-GCCCTAGGGTGGGTTTGATACTTCCTGATGAAATATTTGGTAG-----------------------TTTAAAAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGTAGAGGTAAGTACTCACACCAGTGTGGTCTAGCTGCTGATTACAGTCACTGGA--GTGGGCGGAGGAT--CCCCAGGATGGGGCCTGGGCAACCTGCTCACGAGCCAGTCTGTTGCCATAGGGGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCTTCTCCCTGCCTCCCCAAAGTCAGGGGGTCTAATAGgtggttaagatcaggggtttggtggtcagacaaagctaggtttgaattttgtttctaccccttttcatttgcataattttgggaacatgatttaaactctatg----a s panTro5.chr17 16325070 516 + 83181570 AG-AAGGTCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGGGATTGGTTTAACATTAACACCACTTTACAGTGA------TTTTTTT-ATTATCACTGCTGGG----GTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTAGGGTGGGTTTGATATTTCATAATGAAATATTTGGTAG-----------------------TTTTAAAAATTTC---------------------------------------------------------------------------------------------TAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGTAGAGGTAAGTACTCACACCAGTGTGGTCTAGCTGCTGATTACAGTCACTGGA--GTAGGCGGAGGAT--CCCCAGGATGGGGCCTGGGCAACCTGCTCACGAGCCAGTCTGTTGCCATAGGGGTGTCAGCCTGCAGCCACTATATCAG----TGTTGCCTTCTCCCTGCCTCCCCAAAGTCAGGGGGTCTAataggtggttaaggtcaggggtttggtggtcagacaaagctaggtttgaattttgtttctaccccttttcatttgcataattttgggaacatgatttaaactctatg----a i panTro5.chr17 C 0 C 0 s panPan2.chr17 16229956 516 + 83442489 AG-AAGGTCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGGGATTGGTTTAACATTAACACCACTTTACAGTGA------TTTTTTT-ATTATCACTGCTGGG----GTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAA-GCCCTAGGGTGGGTTTGATACTTCATAATGAAATATTTGGTAG-----------------------TTTTAAAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGTAGAGGTAAGTACTCACACCAGTGTGGTCTAGCTGCTGATTACAGTCACTGGA--GTAGGCGGAGGAT--CCCCAGGATGGGGCCTGGGCAACCTGCTCACGAGCCAGTCTGTTGCCATAGGGGTGTCAGCCTGCAGCCACTATATCAG----TGTTGCCTTCTCCCTGCCTCCCCAAAGTCAGGGGGTCTAATAGgtggttaaggtcaggggtttggtggtcagacaaagctaggtttgaattttgtttctaccccttttcatttgcataattttgggaacatgatttaaactctatg----a i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4065526 516 + 4267968 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGGGATTGGTTTAACATTAACACCACTTTACAGTGA------TTTTTTT-ATTATCACTGCTGGC----GTGTTTTTAT-ATGTATAGAATTCATATGCTGTTGAT-GCCCTAGGGTGGGTTTGATACTTCCTGATGAAATATTTGGTAG-----------------------TTTAAAAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGAAAAGTAGAGGTAAGTACTCACACCAGTGTGGTCTAGCTGCTGATTACAGCCACTGGA--GTGGGCGGAGGAT--CCCCAGGATGGGGCCTGGGCAACCTGCTCACGAGCCAGTCTGTTGCCATAGGGGTGTCGGCCTGCAGCCACTATATCAG----TGTCGCCTTCTCCCTGCCTCCCCAAAGTCAGGGGGTCTAATAGgtggttaagatcaggggtttggtggtcagacaaagctaggtttgaattttgtttctaccccttttcatttgcataattttgggaacatgatttaaactctatg----A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045374 520 - 2193130 AG-AAGGGCTAAGAA----AGTCCCTCATGAATTCCTCTCGGAAGGGATTGGTTTAACATTAACACCACTTTACAGTGA------TTTTTTT-ATTATCACTGCTGGC----GTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTAGGGTGGGTTTGATCCTTCTTGATGAAATATTTGGTAG-----------------------TTTTAAAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGG----------------------------------------------ATGTATTGATAAGTAGAGGTAAGTATTCACACCAGTGTGGTCTAGCTGCTGATTACAGTCACTGGA--GTGGGCGGAGGAT--CCCCAGGATGGGGCCTGGGCAACCTGCTCACGAGCCAGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTATATCAG----CGTTGCCTTCTCCCTGCCTCCCCAAAGTCAGGGGATCTAATAGgtggttaagatcaggggtttggcggtcagacaaagctagatttgaattttgtttctaccccttatcatttgcataattttgggaacatgatttaaactctatgagtta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119407 526 - 77216781 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGAGATTGGTTTAACGTTAACACCACTTTTCAGTGA----TTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTGGGGTGGGTTTGATCCTTCTCGATGAAATATTTGGCAG-----------------------TTTTTTAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGTGGTCTAGTTGCTGATTACAGTCACTGGA--ATGGGCGGAGGAT--CCCCTGGGTGGGGCCTGGGCAACCTGCCCACGAGCCGGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCCTCTCCCTGCCTCCCCAGAATCAGGGAGTCTAATAGGTGGTTAACATTAggggtttggcagtcagacaaagctaggtttgaattttgtttttatgccttatcatttgcataattttgggaacatgatttcaaatctatgagtta i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28032265 528 - 80997621 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGAGATTGGTTTAACGTTAACACCACTTTTCAGTGA--TTTTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTGGGGTGGGTTTGATCCTTCTCGATGAAATATTTGGCAG-----------------------TTTTTTAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGTGGTCTAGTTGCTGATTACAGTCACTGGA--ATGGGCGGAGGAT--CCCCTGGGTGGGGCCTGGGCAACCTGCCCACGAGCCGGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCCTCTCCCTGCCTCCCCAGAATCAGGGagtctaataggtggttaacattaggggtttggcagtcagacaaagctaggtttgaattttgtttctatgccttatcatttgcataattttgggaacatgatttaaaatctatgagtta i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2088508 527 + 10377808 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGAGATTGGTTTAACGTTAACACCACTTTTCAGTGA---TTTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTGGGGTGGGTTTGATCCTTCTCGATGAAATATTTGGCAG-----------------------TTTTTTAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGTGGTCTAGTTGCTGATTACAGTCACTGGA--ATGGGCGGAGGAT--CCCCTGGGTGGGGCCTGGGCAACCTGCCCACGAGCCGGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCCTCTCCCTGCCTCCCCAGAATCAGGGagtctaataggtggttaacattaggggtttggcagtcagacaaagctaggtttgaattttgtttctatgccttatcatttgcataattttgggaacatgatttaaaatctatgagtta i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1974277 529 - 8458610 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGGGATTGGTTTAACGTTAACACCACTTTTCAGTGA-TTTTTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTGGGGTGGGTTTGATCCTTCTTGATGAAATATTTGGAAG-----------------------TTTTTTAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGTGGTCTAGTTGCTGATTACAGTCACTGGA--ATGGGCGGAGGAT--CCCCTGGATGGGGCCTGGGCAACATGCCCACGAGCCGGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCCTCTCCCTGCCTCCCCAGAATCAGGGAGTCTAATAGGTGGTTAACATTAggggtttggcagtcagacaaagctaggtttgaattttgtttctatgtcttatcatttgcataattttgggaacatgatttaaaatctatgagtta i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64918554 527 + 75148670 AG-AAGGGCCAAGAA----AGTCCCTTATGAATTCCTCTTGGAAGGGATTGGTTTAACATTAACACCACTTTTCAGTGA--TTTTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGC-GTTGAT-GCCCTAGGGTGGGTTTGATCCTTCTTGATGAAATATTTGGCAG-----------------------TTTTTTAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGTGGTCCAGTTGCTGATTACAGTCACTGGA--ATGGGCGGAGGAT--CCCCTGGATAGGGCCTGGGCAACCAGCCCACGAGCTGGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCCTCTCCCTGCCTCCCCAAAATCAGGGAGTCTAATAGGTGGTTAAGATCAGGGGTTTGGCGGTCAGACAAAGCTAGGTTTGAATTTTGTTTCTATGCCTTATCATTCGCATAATTTTGGGAACATGATTTAAACTCTATGAGTTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2158578 526 + 4244037 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGGGATTGGTTTAACGTTAACACCACTTTTCAGTGA----TTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTGGGGTGGGTTTGATCCTTCTTGATGAAATATTTGGCAG-----------------------TTTTTTAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGTGGTCTAGTTGCTGATTACAGTCACTGGA--ATGGGTGGAGGAT--CCCCTGGATGGGGCCTGGGCAACATGCCCACGAGCCGGCCTGCTGCCATGGGAGTGTCAGCCTGCAGCCACTATATCAG----TGTCGCCCTCTCCCTGCCTCCCCAGAATCAGGGagtctaataggtggttaacattaggggtttggcagtcagacaaagctaggtttgaattttgtttctatgccttatcatttgcataattttgggaacatgatttaaaatctatgagtta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2181585 530 + 4569836 AG-AAGGGCCAAGAA----AGTCCCTCATGAATTCCTCTTGGAAGCGATTGGTTTAACATTAACACCACTTTTCAGTGATTTTTTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTGTATAGAATTCATATGCTGTTGAT-GCCCTAGGATGGGTTTGATCCTTGTTGATGAAATATTTGGCAG-----------------------TTTTTAAAATTTC---------------------------------------------------------------------------------------------CAAAATTAAAAG--------ACTGTGTTTGA----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCACACCAGTGCGGTCTAGTTGCTGATTACAGCCACCAGA--ATGGGCGGAGGAT--CCCCAGGATGGGGCCTGGGCAACCTGCCCACGAGCCGGCCTGCTGCCATAGGAGTGTCAGCCTGCAGCCACTCTATCAG----TGTTGCCCTCTCCCTGCCTCCCCGAAGTCAGGGGGTCTAATAGGTGGTTGagatcaggggtctggcggtcagacaaagctaggtttgaattttgtttctatgccttatcgtttgcataatttggggaacatgatttaaaatctgtgagtta i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46137443 486 - 159171411 AG-AAGGGCCAAGAA----AGTCCCGGATGAATTCCCCTTGGAAGGGATTAATGTAACATTAACACCATTTTATGGTGA------TGTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTA--TTTTATAGAATTCACACACTGTTGAT-GCCTTAGGGTGGATTTGATCCTTCTTGAGGAAATACTTGGCAG-----------------------TTTTAAAAATTTC---------------------------------------------------------------------------------------------CAAAATGAAAAG--------ACTGTGTTTGG----------------------------------------------GTGTATTGATAAGTAGAGGTAAGTACTCACACCAGTGTGGCTGAGCTGCTGATTACAGTCACCGGA--GTGGGTGGAGGAGCCCCCCTGGATGGGGCCTGGGCAACCTGCTCACCAGCCAGCCTGCT-------------------------------------------GCCCTCTCCCCGCCTCCCCAAAGTCAGGGGGGCTAACAGgtggttaagatgaggggtctggaggtcagacaaagctaggtttgaattttgttttcaccccttatcatttgcataatttggggaacacgatttaaactctatgcgtta i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1847122 484 + 3513951 AG-AAGGGCCAAGAA----AGTTCCGAATGAGTTCCCCTTGGAAGGGATTAATGTAACATTAACACCATTTTACAGGGA---TTTTTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTTTATAGAATTCATATGCTGTTGAT-GCCTTAGGGTGGGTTTGATCCTTCTTGAAGATATATTTGGCAG-----------------------TTTAAAAAATTTC---------------------------------------------------------------------------------------------CAAAATGAAAAG--------AC--TGTTTGG----------------------------------------------GTGTATTGATAAGCAGAGGTAAGTACTCGCACCAGTGTGGCCGAGCTGCTGATT--AGTCACTGGA--GTGGGCGGAGGAG--CCCCTGGATGGGGCCTGGGCAACCTGCTCACCAGCCAGCCTGCT-------------------------------------------GCCCTCTCCCTGCCTCCCCAAAGTCAGGGGCTCTAATAGgtggttaagaggaggtgtttgaaggtcagacaaagctaggtttgaattttgtttctaccccttaacatttgcatcatttggggaacatcatttaaactctgtgcgtta i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1898239 487 + 1920343 AGAAAGGGCCAAGAA----AGTCCCGAATGAATTCCCCTTGGAAGGGATTAATGTCACATTAACACCATTTTATGGGGA-----TGTTTTTT-ATTATCACTTCTGGCTGTTGTGTTTTTAT-TTTTACAGAATTCATATGCTGTTGAT-GCTTTAGGGTGGGTTTGATCCTTCTTGAGGAAATACTTGGCAG-----------------------TTTTAAAAGTTTC---------------------------------------------------------------------------------------------CAAAATGAAAAG--------ACTGTGTTTGG----------------------------------------------GTGTATTGATAAGTAGAGGTAAGTACTCACACCAGTGTGGCCGAGCTGCTGATTACAGTCACTCGG--GTGGGAGGAGCAG--CCCCTGGATGGGGCCTGGGCAACCTGCCCACCAGCCAGCCTGCT-------------------------------------------GCCCTGCCCCCGCCTCCCCAAAGTCAGGGGGTCTAAAAGgtagttaagatgaggggtttggaggtcagacaaagctaggtttgaattttgcttctaccccttatcatttgcataatttggggaacatgatttaaactctgtgagtta i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7012165 474 - 7032639 AG-AAGGGCCAAGAA----AGTCCCGAATGAATTCCCCTTGGAAGCGATTAATGTAACATTAACACCATTTTACAGGGA-----TGTTTTTT-ATTATCACTTTTATCTGTTGTGTTTTTAT-TTTTATAGAATTCATATGCTGTTGAT-GCCTTAGGGTGGGTTTGATCCTTCTTGAGGAAATACTTGGCAG-----------------------TTTAAAAAACTTC---------------------------------------------------------------------------------------------CAAAATGAAAAG--------ACTGTGTTTGG----------------------------------------------GTGTATTGATAAATAGAGGTAAATACTCACACCAGTGTGGCCGAACTGCTGATTACAGTCACTGGAGTGTGGGTTGGGGAG--CCCCTGGATGGGGCCTGGGCAACCTGCTCACCAGCCAGCCTGCT-------------------------------------------GCCCTCTCCTCGCCTCCCCAAAGTCAGGGGGTCTAATAGGTGGTTAAGATGAGGGGTTTGGAG--------------GGTTTGAATTTTGTTTCTACCCCTTATCATTTGCATAATTTGGGGAACATGATTTAAACTCTATGAGTTA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22839669 477 + 28711273 AA-AAGGATCAGGAT----AGCCCATTGTGAACTCCTCTTGGAAGGAGTTGACTTAATACTAAATCCACTTTTCAGTGA------TGTCTTT-CTTTTC-CTTCTAGAAGATGTGTTTTTATACTTAACAGAATTCATATATTGTTGGC-TCCATAGACTGAGTTTAATACATCTTGGTGAAATATTTTGCAG-----------------------TTTTAAAAATTTC---------------------------------------------------------------------------------------------C-AAATTATAAG--------ATTGTCCTTCG----------------------------------------------GAGTATTGATAAGGGGAGGTAAGTCCTCACACCAGTTTGATCCAGCTGTTGACAGCAGTCACTGAA--GGGGGCAGATGAT---CCCTACCTGGCATCAGGGTGACCTACTCCTAAGCC-TTCAATCACCGTGGGGAAGGC--------------------------------------------CTCCAACATGAGGAGACCTAACAGATGAGTAAGTTcagaggtttgggggtcag-cagagctaggtttgcatcttgttcctacccctt---aattgcacagtttttgaaacatgatttaaagcctctgagtta i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22102228 639 - 122082543 AG-ACAGGTCCAGAG----AGAGCATCACAAAGTCTTCTTGTAAGAGATTGCTTGAACTTTAAAA-TACTTTGCAGAGA----------TGA-CCTAGTATTTCTGGCTGTTGAAGTTTTAT-ATTTGTGAGATTCGTAAGCTGTTGATCACCATTTTGTGAGTTTAATACTCCTTCATGAAATATTTGAAGGTTTGTTTTACTTCCCCAGAAttttttgagaagtttctcataccttggtgcaggctgaactggggctcactatgcagcccacactgggcttgaacttacagcgatccttctgcctcagcttcccaaatatcagaattagaagggtaagccactatgcttgactAAATGTTTATATTTTAAATTTCCCAATGATAAGATCATCGTTGGGTGTATTACTAAGTAGAGGTAAACATCCA-ACTCCTTTGATCCAGCTAACGTCA-----CACTGCA--CGGGGGAGATGAT--CCCCGACACAGGGCCTGGACATGCTGCTTATGGGCCAGCC--CTGCTGTGTGAATGTCATCCAACCTCT-CTGTACCTGCTCCTAGTGCTCTCTCTCTGTACCTCC----TCGGGAGATCCAA---------ATGAGCAGAGATTTTG-GGACCGATGGCTCTGGATTCGAATTTTGTTTTT--------------------------TATCATAATTTAAACTTTG------A i mm10.chr11 C 0 C 0 s canFam3.chr9 21452983 510 + 61074082 GG-AAGAATTCGGAAAACCAGTGCCTCATAAATCCCTCTTGGAAGAGGGTGATTTAACCTTGAAATTACTTTGCAGTGA------TGTCCTT-A-TATCACTTTCAGTTGTTGCAGTTTTAT-ATTTATAGAACTCATACACTGTGAAC-TCCATAGCATGAATTTAATCCTT---GGCAAAATATTTTGCAG-----------------------TTATTAAAAGTTC---------------------------------------------------------------------------------------------C-AAATTAAAAG--------ATTGTATTTGT----------------------------------------------GTATATGGCTAAGTAGAGG-AGGTTT-----CCAGTTTAATCTAGCTGATGATTCCAGTTATGGGA--GTGGACAAATGGT--CCCCATCATGAGGCCTGGACCATAGGCCCATGAATCAGTGCACTGCTGTATAAATGTCAATCCTCTATCACTATAT-------TACTGTTTTTTTCCCTCCACTCCTAAGTCAGGAGGTCTAAGAGATAATTaagaccagaagctttggggtcagcccaaactaggtttggatcttatttcaaccatttattacttgcataattctgggaacaggatttaaactctctga---- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 455853 495 - 852752 AG-AAGGAGCAGGAA----AGCCCCCCAGGAATTCCTCACAGAAGAGCTTGATTTAATCCTAAAACCACTTTGCAATGA------TGCCCTT-ATT-TTGCTTTTGGCTGCTACATTTTTAT-ATGTACAGATGTCTTGTACCGTTGAG-GCCATAGTGTGAGTTCAATCCTTCTTGGCCAGATATTTTGTGG-----------------------TGTTTTAAATTCC---------------------------------------------------------------------------------------------C-GAATTAAAAT---------TTATCTTTGG----------------------------------------------GTGCACT----------GGTAAGTTCTCATGCCAGC---------TTGATAATTACCGTCCCTGGA--GTGGGAAGTTGGT--CCCCAACGTGGGGTCTGGGCGGCCTGCCTGTCAGCCAGCCCACTGTTAAGCAAGCAGCAGCCTGCAGTGG-TATATTAG----AGTCACACACAGC---CCTCCCCCAAGTTAGAAggtctagtagatggttaagatcataggtttgggggtctgataaacctaggcttgtgtcttgtttct-cctcccattacttgcataattttgggaatgtga--caaactctctgaatta i dasNov3.JH570468 C 0 C 0 a score=59931.000000 s hg38.chr17_JH159148v1_alt 3401 4 + 88070 gttt s panTro5.chr17 16325586 4 + 83181570 gttt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230472 4 + 83442489 gttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066042 4 + 4267968 GTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045894 4 - 2193130 gttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119933 4 - 77216781 gttt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28032793 4 - 80997621 gttt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2089035 4 + 10377808 gttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1974806 4 - 8458610 gttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64919081 4 + 75148670 GTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159104 4 + 4244037 gttt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2182115 4 + 4569836 gttt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46137929 4 - 159171411 gttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1847606 4 + 3513951 gttt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1898726 4 + 1920343 gttt i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7012639 4 - 7032639 GTTT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22840146 4 + 28711273 gttA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22102867 4 - 122082543 GTTT i mm10.chr11 C 0 C 0 s dasNov3.JH570468 456348 4 - 852752 gttt i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 21453493 0 + 61074082 C a score=109151.000000 s hg38.chr17_JH159148v1_alt 3405 10 + 88070 tgcca---cttct s panTro5.chr17 16325590 10 + 83181570 tgcca---cttct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230476 10 + 83442489 tgcca---cttct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066046 10 + 4267968 TGCCA---CTTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045898 13 - 2193130 TGCCActtcttct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119937 13 - 77216781 TGCCACTTCTTCC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28032797 13 - 80997621 TGCCACTTCTTCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2089039 13 + 10377808 TGCCACTTCTTCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1974810 13 - 8458610 TGCCACTTCTTCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64919085 13 + 75148670 TGCCACTTCTTCC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159108 13 + 4244037 TGCCACTTCTTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2182119 13 + 4569836 AGCCACTTCTTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46137933 13 - 159171411 TGCCACTTCTTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1847610 13 + 3513951 TGCCGCTTCTTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1898730 13 + 1920343 TGCCACTTCTTCT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7012643 13 - 7032639 TGCCACTTCTTCT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22840150 13 + 28711273 TGCCACTTTTTAT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 456352 10 - 852752 tgccacatct--- i dasNov3.JH570468 C 0 I 542 e mm10.chr11 22102871 0 - 122082543 C e canFam3.chr9 21453493 0 + 61074082 C a score=1339325.000000 s hg38.chr17_JH159148v1_alt 3415 138 + 88070 gtTTTCTTCTTTTCTGTTCTAAAAAAATCTTGagaggaaccaatttgggggagattttaagcttcctaaaagggccaatgaagttttatattttaatcttaaCTTTGTTTTAAACCTGGTTTCT-TCTTTATTTATTAC s panTro5.chr17 16325600 138 + 83181570 gtTTTTTTCTTTTCTGTTCTAAAAAAATCTTGagaggaaccaatttggggcagattttaagcttcctaaaagggccaatgaagttttatattttaatcttaaCTTTGTTTTAAACCTGGTTTCT-TCTttatttattac i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230486 137 + 83442489 gtTTT-TTCTTTTCTGTTCTAAAAAAATCTTGagaggaaccaatttggggcagattttaagcttcctaaaagggccaatgaagttttatattttaatcttaaCTTTGTTTTAAACCTGGTTTCT-TCTTTATTTATTAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066056 138 + 4267968 TTTTTTTTCTTTTCTGTTCTAAAAAaatcttgagaggagccaatttgggggagattttaagcttcctaaaagggccaatgaagttttatattttaatcttaacTTTGTTTTAAACCTGGTTTCT-TCTTTATTTATTAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2045911 138 - 2193130 gtttttttcttttctgttctAAAAACAtcttgagaggaaccaatttgggggagattttaagcttcctaaaaaggccaatgaagttttacattttaatcttaacTTCGTTTTAAACCTGGTTTCT-TCTTTATTTATTGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30119950 138 - 77216781 GGTTTTTTCTTTTCTGTTCTAAAAAAATATTGagaggaaccaattagggggagattttaggcttcctaaaaaggccaatgaagttttacattttAATATTAACTTCGTTTTAAACCTGGTTTCT-TCTGTATTTATTAC i rheMac8.chr16 C 0 I 1 s macFas5.chr16 28032810 138 - 80997621 AGTTTTTTCTTTTCTGTTCTAAAAAaatattgagaggaaccaatttgggggagattttaggcttcctaaaaaggccaatgaagttttacattttAATATTAACTTCGTTTTAAACCTGGTTTCT-TCTGTATTTATTAC i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2089052 138 + 10377808 GGTTTTTTCTTTTCTGTTCTAAAAAaatattgagaggaaccaatttgggggagattttaggcttcctaaaaaggccaatgaagttttacattttAATATTAACTTCATTTTAAACCTGGtttct-tctgtatttattac i macNem1.NW_012014910v1 C 0 I 362 s cerAty1.NW_012006043v1 1974823 138 - 8458610 GGTTTTTTCTTTTCTGTTCTAAAAAaatactgagaagaaccaatttgggggagattttaggcttcctaaaaaggccaatgaagttttacattttAATATTAACTTTGTTTTAAACCTGGTTTCT-TCTGCATTTATTAC i cerAty1.NW_012006043v1 C 0 I 2 s chlSab2.chr16 64919098 138 + 75148670 GGTTTTTTCTTTTCTGTTCTAAAAAAATATTGagaggaaccaatttgggggagattttaggcttcctaaaaaggccaatgaagttttacattttAATATTAACTTCATTTTAAACCTGGTTTCT-TCTGTATTTATTAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159121 137 + 4244037 GG-TTTTTCTTTCCTGTTCTAAAAAaatattgagaggaaccaatttgggggagattttaggcttcctgaaaaggccaatgaagttttacattttAATATTAACTTTGTTTTAAACCTGGTTTCT-TCTGCATTTATTAC i manLeu1.NW_012106252v1 C 0 I 8 s colAng1.NW_012122154v1 2182132 138 + 4569836 GGTTTTTTCTTTTCTGTTCTAAACAAATATTGagaggaaccaatttgggggagattttaggcttcctaaaaaggccaatgaagttttacattttAATATTAACTTCATTTTAAACCTGGTTTCT-TCTTTATTTATTAC i colAng1.NW_012122154v1 C 0 I 1 s calJac3.chr5 46137946 137 - 159171411 GCTTTTTTCTTTTCTGTTTTAAAAaactcttgagaagaaccaattt-ggggagattctaagcttcctaaaacggccagtgaagttttacattttgatcttagcTTCGTTTTAAACCTGGTTTCT-GCTTTACTTATCAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1847623 136 + 3513951 GCTTTTATCTTT--TGTTTTTAAAaactcttgaaaagaaccaatttgggggagattctaagcttcctaaaaaggccaatgaagttttacattttaatcttagcTTCGTTTTAAACCTGGTTTCT-GCTTTATTTATCAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1898743 137 + 1920343 GCTTTTATCTTTTCTGTTTTTAAAaactcttgagaagaaccaattt-ggggagattctaagcttcctaaaaaggccaatgaagttttacattttaatcttagcTTCATTTTAAACCTGGTTTCT-GCTTTATTTATCAC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7012656 136 - 7032639 GCTTTTTTCTTTTCTGTTTTAAAAaactcttgagaagaaccaattt-ggggagattctaagcttcctaaaaaggccaatgaagttttacattttaatcttagcTTCATTTT-AACCTGGTTTCt-gcttaatttatcac i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22840163 118 + 28711273 GATTTCTGCTTTTATTTT------GAGTCTCAAGAAAAGCTAATGT-GAGGAGATTATAAGCTTCCCAAAA-GGTCAACA-------------TAGCATTAACTGTGTTTTAAAACTGATGTCTGTTTTTATTTGATTT i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22102871 0 - 122082543 C e canFam3.chr9 21453493 0 + 61074082 C e dasNov3.JH570468 456362 542 - 852752 I a score=49560.000000 s hg38.chr17_JH159148v1_alt 3553 5 + 88070 TTTTT s panTro5.chr17 16325738 5 + 83181570 ttttt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230623 5 + 83442489 TTTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066194 5 + 4267968 TTTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2046049 5 - 2193130 TTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30120089 5 - 77216781 TTTTT i rheMac8.chr16 I 1 C 0 s macFas5.chr16 28032949 5 - 80997621 TTTTT i macFas5.chr16 I 1 C 0 s cerAty1.NW_012006043v1 1974963 5 - 8458610 TTTTT i cerAty1.NW_012006043v1 I 2 C 0 s chlSab2.chr16 64919236 5 + 75148670 TTTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159266 5 + 4244037 TTTTT i manLeu1.NW_012106252v1 I 8 C 0 s colAng1.NW_012122154v1 2182271 5 + 4569836 TTTTT i colAng1.NW_012122154v1 I 1 C 0 s calJac3.chr5 46138083 5 - 159171411 TTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1847759 5 + 3513951 TTTTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1898880 5 + 1920343 TTTTT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7012792 5 - 7032639 ttttt i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22840281 5 + 28711273 TTATT i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22102871 0 - 122082543 C e canFam3.chr9 21453493 0 + 61074082 C e dasNov3.JH570468 456362 542 - 852752 I e macNem1.NW_012014910v1 2089190 362 + 10377808 I a score=-17776.000000 s hg38.chr17_JH159148v1_alt 3558 4 + 88070 -Ttt--a s panTro5.chr17 16325743 4 + 83181570 -ttt--a i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230628 4 + 83442489 -Ttt--a i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066199 3 + 4267968 -TTT--- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2046054 6 - 2193130 -TTTtta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30120094 3 - 77216781 -TTT--- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28032954 3 - 80997621 -TTT--- i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 1974968 3 - 8458610 -TTT--- i cerAty1.NW_012006043v1 C 0 I 1 s chlSab2.chr16 64919241 1 + 75148670 -T----- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159271 1 + 4244037 -T----- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2182276 3 + 4569836 -TTT--- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46138088 3 - 159171411 -TTC--- i calJac3.chr5 C 0 I 1 s saiBol1.JH378271 1847764 3 + 3513951 -TTt--- i saiBol1.JH378271 C 0 I 3 s cebCap1.NW_016107730v1 1898885 3 + 1920343 -TTT--- i cebCap1.NW_016107730v1 C 0 I 2 s aotNan1.NW_018502359v1 7012797 1 - 7032639 -t----- i aotNan1.NW_018502359v1 C 0 I 2 s otoGar3.GL873537 22840286 3 + 28711273 -TTT--- i otoGar3.GL873537 C 0 I 2 s canFam3.chr9 21453493 4 + 61074082 cttg--- i canFam3.chr9 C 0 C 0 e mm10.chr11 22102871 0 - 122082543 C e dasNov3.JH570468 456362 542 - 852752 I e macNem1.NW_012014910v1 2089190 362 + 10377808 I a score=2100.000000 s hg38.chr17_JH159148v1_alt 3562 1 + 88070 g s panTro5.chr17 16325747 1 + 83181570 g i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230632 1 + 83442489 g i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066202 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2046060 1 - 2193130 g i nomLeu3.chrUn_GL397460_1 C 0 C 0 s mm10.chr11 22102871 1 - 122082543 G i mm10.chr11 C 0 C 0 s canFam3.chr9 21453497 1 + 61074082 g i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7012798 2 - 7032639 I e cebCap1.NW_016107730v1 1898888 2 + 1920343 I e manLeu1.NW_012106252v1 2159272 0 + 4244037 C e dasNov3.JH570468 456362 542 - 852752 I e otoGar3.GL873537 22840289 2 + 28711273 I e saiBol1.JH378271 1847767 3 + 3513951 I e calJac3.chr5 46138091 1 - 159171411 I e colAng1.NW_012122154v1 2182279 0 + 4569836 C e chlSab2.chr16 64919242 0 + 75148670 C e cerAty1.NW_012006043v1 1974971 1 - 8458610 I e macNem1.NW_012014910v1 2089190 362 + 10377808 I e macFas5.chr16 28032957 0 - 80997621 C e rheMac8.chr16 30120097 0 - 77216781 C a score=3633775.000000 s hg38.chr17_JH159148v1_alt 3563 312 + 88070 ttttgccacttctaacatagtgatgacaattatactt----a----ctgaagtcattgtgaggatccagtg-aaaaatgcagccaaggacttgatc--t------agtaactatgcaataaatgAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTACTAGTAAA--CAAGTTTCAGGAATGATAAATGGGAAGGTTTTAAAAAGAGGTAGAGGCACTTAAGTGTCCCTGGGTTCCTTGGACTAATTTTCCATTTCCCGTCT------TG-ACATC-CTCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AATGGTGCAAAGCTGCATTCCTGG s panTro5.chr17 16325748 312 + 83181570 ttttgccacttctaacatagtgatgacaattatactt----a----ctgaagtcattgtgaggattcagtg-gaaaatgcagccaaggacttgatc--t------agtaactatgcaataaatgaaagccatttct------attgtt-ATTATTAGTAATAGTACTAGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTAGAGGCACTTAAGTGTCCCTGGGTTCCGTGGACTAATTTTCCATTTCCCATCT------TG-ACATC-CTCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AATGGTGCAAAGCTGCATTCCTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230633 312 + 83442489 ttttgccacttctaacatagtgatgacaattatactt----a----ctgaagtcattgtgaggattcagtg-gaaaatgcagccaaggacttgatc--t------agtaactatgcaataaatgAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTACTAGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTAGAGGCACTTAAGTGTCCCTGGGTTCCGTGGACTAATTTTCCATTTCCCATCT------TG-ACATC-CTCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AATGGTGCAAAGCTGCATTCCTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066203 312 + 4267968 TTTTGCCACTTCTAACATAGTGATGACAATTATACTT----A----CTGAAGTCATTGTGAGGATTCAGTG-AAAAATGCAGCCAAGGACTTGATC--T------AGTAACTATGCAATAAATGAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTACTAGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTAGAGGCACTTAAGTGTCCCTGGGTTCTTTGGACTAATTTTCCATTTCCCATCT------TG-ACATC-CTCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AATGGTGCAAAGCTGCATTCCTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2046061 311 - 2193130 ttttgccacttctaacatagtgatga-aagtatactt----a----ctaaagtcattgtgaggattcaatg-aaaaatgcagtcaaggacttgatc--t------agtaactatgcaataaatgAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTACTAGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTAGAGGCACTTAAGTGTCCCTGGGTTCCATGGACTAATTTTCTATTCCCCATCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGTCTTCATTTC-TGAT----TG---AATGGTGCAAAGCTGCATTCCTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30120097 311 - 77216781 ttttgccacttctaacatagtgatgacaattatactt----a----ctaaagtcattgtgaggatccaatg-aaaaatgcagtcaagggcttggtc--t------agtaactatgcaataaatgAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGACACTTAAGTGTCCCTGGGTTCCATGGACTAATTTTCCATTTCCCGTCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACAGCGCAAAGCTGCGTTCCTGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28032957 311 - 80997621 ttttgccacttctaacatagtgatgacaattatactt----a----ctaaagtcattgtgaggatccaatg-aaaaatgcagtcaagggcttggtc--t------agtaactatgcaataaatgaaagccatttct------attgtt-ATTATTAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGACACTTAAGTGTCCCTGGGTTCCATGGACTAATTTTCCATTTCCCGTCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACAGCGCAAAGCTGCGTTCCTGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2089552 311 + 10377808 ttttgccacttctaacatagtgatgacaattatactt----a----ctaaagtcattgtgaggatccaatg-aaaaatgcagtcaagggcttggtc--t------agtaactatgcaataaatgaaagccatttct------attgtt-attattAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGACACTTAAGTGTCCCTGGGTTCCATGGACTAATTTTCCATTTCCCGTCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACAGCGCAAAGCTGCATTCCTGG i macNem1.NW_012014910v1 I 362 C 0 s cerAty1.NW_012006043v1 1974972 311 - 8458610 ttttgccacttctaacatagtgatgacaattatactt----a----ctaaagtcattgtgaggatccaatg-aaaaatgcagtcaagggcttggtc--t------agtaactatgcaataaatgAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGACACTTAAGTGTCCCTGGGTTCCAGGGACTAATTTTCCATTTCCCGTCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACAGCGCAAAGCTGCGTTCCTGG i cerAty1.NW_012006043v1 I 1 C 0 s chlSab2.chr16 64919242 311 + 75148670 TTTTGCCACTTCTAGCATAGTGATGACAATTATACTT----A----CAAAAGTCATTGTGAGGATCCAATG-AAAAATGCAGTCAAGGACTTGGTC--T------AGTAACTATGCAATAAATGAAAGTAATTTCT------ATTGTT-ATTATTAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGGCACTTAAGTGTCCCTGGGTTCCATGGACTAATTTTCCATTTCCCATCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACAGCGCAAAGCTGCGTTCCTGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159272 311 + 4244037 ttttgccacttctaacatagtgatgacaattatacgt----a----ctaaagtcattgtgaggatccaatg-aaaaatgcagtcaagggcttggtc--t------agtaactatgcaataaatgaaagccatttct------attgtt-ATTATTAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGGCACTTAAGTGTCCCTGGGTTCTATGGACTAATTTTCCATTTCCCGTCT------TG-ACACC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACAGCGCAAAGCTGCGTTTCTGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2182279 311 + 4569836 ttttgccacttctaacatagtgatgacaattatactt----a----ctaaagtcattgtgaggatccaatg-aaaaatgcagtcaagggcttggtc--t------agtaactatgtaataaatgAAAGCCATTTCT------ATTGTT-ATTATTAGTAATAGTAC-AGTAAA--CAAGTTTCAGGAACGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGGCACTTAAGTGTCCCTGGGTTCCATGGACTAATTTTCCATTTCCCTTCT------TG-ACAAC-CCCTC-CCCAAACTGGGTCAAGGCTTCATTTC-TGAT----TG---AACGGCGCAAAGCTGCATTCCTGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46138092 317 - 159171411 TCTTGCCGCctctaacatagtgatggcaattatactt----a----ctaaagctactgtgagggttcaatgaaaaaatgcggtcaagggcttggtc--t------agtaaccaggcaATAAATGAAAGCCATTTCT------ATTGTT-AATAATAGCAACAGTACTAGTAAA--TACGTTTCAAGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGGCTCATAAGTGTCCCTGGGTTCCATGAACTAATTTTCCATTTCCCATCT------TG-ACACC-CTCTT-CCCAAACTGGGTCAGGGCTTCATTTC-TGACTGTCTG---AATGGTGCAAAGCTGCATTCCTGG i calJac3.chr5 I 1 C 0 s saiBol1.JH378271 1847770 313 + 3513951 ttttgccacttctaacatagtgatggcagttacactt----a----ctaaagttactgtgaggattcaatg-aaaagtgcagtcgagggcttggtc--t------ggtagctatgcaataaacAAAAGCCGTTTCT------ATTGT----TATTAGCGACGGTGCTGGTAAA--TAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGAGGTGGAGGCACTTAAGTGTCCTTGGGTTCCATGAACTAATTTTCCATTTCCCATCT------TG-ACACC-CTCTC-CCCAAACTGGGTCAGAGCTTCATTTC-TGATTGTCTG---AATGGTGCAAAGCTGCATTCCTGG i saiBol1.JH378271 I 3 C 0 s cebCap1.NW_016107730v1 1898890 313 + 1920343 ttttgccacttctaacatagtgatggcagttatactt----a----ctaaagttattgtgaggattcaatg-aaaagtgcagtcaagggcttggtc--t------agtaactatgcaataaatgAAAGCCATTTCT------ATTGT----TATTAGCGACAGTACTAGTAAA--TAAGTTTCAGGAATGCTAAATGGGAAGGTTTTAAAAAGCGGTGGAGGCACTTAAGTGTCCTTGGGTTCCATGAACTAATTTTCCATTTCCCATCT------TG-ACACC-CTCTC-CCCAAACTGGGTCAGAGCTTCATTTC-TGATTGTCTG---AATGGTGCAAAGCTGCATTCTTGG i cebCap1.NW_016107730v1 I 2 C 0 s aotNan1.NW_018502359v1 7012800 315 - 7032639 ttttgccacttctaacgtagtgatggcaattatactt----a----ctaaagttattgtgaggattcaatg-aaaaatgcagtcaagggcttgatc--t------agtaactatgcaataaAT-AAAGCCATTTCT------ATTGTT-ATTATTAGCGACAGTACTAGTAAA--TAAGTTTCAGGAATGCTAAACGGGAAGGTTTTAAAAAGAAGTGGAGGCTCTTAAGTGTCCCTGGGTTCCATGAACTAATTTTCCATTTCCCATCT------TG-ACACC-CTCTC-CCCAAACTGGGTCAGGGCTTCATTTC-TGACTGTCTG---AATGGTGCAAAGCTGCATTCCTGG i aotNan1.NW_018502359v1 I 2 C 0 s otoGar3.GL873537 22840291 317 + 28711273 CTTTGCCACTTCTAACATAGCAATGACAACTACACTT-------------GGTCATGGGGAGTATTTGATG-AAAAATGCCGTCAAGGGCTTGGTCTGT------AGTGAAAATGCAATGAATAAAAGCCATTACG------ATTATT-ATTAGTAGTAATGGTATCAGGAAAGTTAGGTTTAAGGAAAGGCAATTGGAAAGGTTCCAGAAAGAAGTGGAGGCACTTTAGTGTCCATGAGTTCCACTGAATGATTTTTTGGTGCCCATCTC-----CA-ACACT-CCCCCGTTCCAACTGGGTCAGAGCTTCATTTCTTGGC----TGTCTGATGGCCCAGGACCACATTCCTGG i otoGar3.GL873537 I 2 C 0 s mm10.chr11 22102872 282 - 122082543 TCTTGTTACTTTTAAAATAGGGATGTCAGCCATACTTCCTAG----CTAAGGTCAT--------TTCAAGG-A-------------------------T------GGTAGCTGTGC---TAAGGGAGGTCATTACA------GCTGTTAATTGTTGGCAGCAACTC-CGGAGT--TAAGTTCAA--AATGCTGA-TGTGAAGATTCTAGGGAGAGGGGGACACGCATAAACATTCTTGCGGTCCACAGACTAGTTTTCTGTTCTTCATTTTTGATATC-ACACC-TTCTC-TTTGAATACTGTCAGCACTCCACCGC---AT----CT---GATGGCACAGAACTGCG-TCCTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21453498 335 + 61074082 ttttgttacctttaacacagtaccaagaattatacct----gctacctaaggtcgttgcaag-atttaatg-aaaaatgcagtcaaggacttgatg--tatagtaagttactataaatggaatggaagccattactactTCAATTACT-ATTATTCTTAGTGTTAATAATAAAATTGAGTTTCAGGAAAACCAAATGGGAAGATTCTA-AAAGAGGTGGAGACATTGGAGTGCCCTTAGGATGCACTGACTGATTTTCTGTTTGCCATCT------CGCACATCACCCTC-TTTCAACTGGGTCAAGGCTTCGTTTCCTGATTCTCTA---AATGGTGCAGAACTGCATTCCTGG i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 456362 542 - 852752 I a score=22517915.000000 s hg38.chr17_JH159148v1_alt 3875 1597 + 88070 AGGAACAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTGAGGCTGGAGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGAGCAGTGTCAACGAATCCAAATGCAGCGCAGAAAACTCCCGACTCAACA-GACACCTTTTCAAAGTTGA---AACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAAGATGCTGCATGGCGTGCCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCCAATGCAGGTATACTGAGCTTGCAACTTCCCAGCAAGGTCAGCACCAGCACCATGGCAGACGGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAGTTAAAGGTGGATTTCGACATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAATGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCCTGCTTCGTGTCAACCTACCCGCCTTCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCGATGCCAGTCCCTGCCAGCAAAGCTCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCATCTGTACAGCTAGTCCATGCCAACCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTCCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGTGT-GCCTTCCCATTGCCAGCCACCTCACTGCCAACTGGTTCCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGCCCCTTGTTCCACAAAGAACTGTTGCAAACCAGCTTCTTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCCCTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTAGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCCCTCTTCACACCTCCTCTGAGGGTCTGCGGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCCTGATTCCACCTTCACATTCTCTCCAGGTGCTGACCAGGGAACTTGTCCAGGCAC----GAAGAGATCCT----TCTTAACCG s panTro5.chr17 16326060 1597 + 83181570 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTGAGGCTGGAGAGCAATCTGTAAAAGAGACAGCTCATCCAAGAGCAGGAGCAGTGTCAACGAATCCAAATGCAGCACAGAAAACTCCCAACTCAACA-GACACCTTTTCAAAGTTGA---AACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAAGATGCTGCATGGTGTGCCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCCAATGCAGGTATACTGAGCTTGCAACTTCCCATCAAGGTCAGCACCAGCACCATGGCAGACGATTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCGTCACCACATACCCAGTTAAAGGTGGCTTTCGACATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAATGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTTCCAGCAACGTCTTGTGTGGGATTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCGATGCCAGTCCCTGCCAGCAAAGCTCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCATCTGTACAGCTAGTCCATGCCAACCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTCCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGTGT-GCCTTCCCATTGCCAGCCACTTCACTGCCAACTGGTTCCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGCCCCTTGTTCCACAAAGAACTGTTGCAAACCAGCTTCTTGTGACACTGTGATTTCTGGCCAACGAACTTGTGATGGACCCCCTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTAGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCCCTCTTCACACCTCCTCTGAGGGTCTGCGGCTGTCTATAAATGCATAGCTGTCCC-TGGGTGT----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCCTGATTCCACCTTCACATTCTCTCCAGGTGCTGACCAGGGAACTTGTCCAGGCAC----GAAGAGATCCT----TCTTAACCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16230945 1597 + 83442489 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTGAGGCTGGAGAGCAATCTGTAAAAGAGACAGCTCATCCAAGAGCAGGAGCAGTGTCAACGAATCCAAATGCAGCGCAGAAAACTCCAGACTCAACA-GACACCTTTTCAAAGTTGA---AACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAAGATGCTGCATGGCGTGCCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCCAATGCAGGTATACTGAGCTTGCAACTTCCCAGCAAGGTCAGCACCAGCACCATGGCAGACGACTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCGTCACCACATACCCAGTTAAAGGTGGCTTTCGACATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAATGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTTCCAGCAACGTCTTGTGTGGGATTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCGATGCCAGTCCCTGCCAGCAAAGCTCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCATCTGTACAGCTAGTCCATGCCAACCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTCCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGTGT-GCCTTCCCATTGCCAGCCACTTCACTGCCAACTGGTTCCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGCCCCTTGTTCCACAAAGAACTGTTGCAAACCAGCTTCTTGTGACACTGTGATTTCTGGCCAACGAACTTGTGATGGACCCCCTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTAGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCCCTCTTCACACCTCCTCTGAGGGTCTGCGGCTGTCTATAAATGCATAGCTGTCCC-TGGGTGT----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCCTGATTCCACCTTCACATTCTCTCCAGGTGCTGACCAGGGAACTTGTCCAGGCAC----GAAGAGATCCT----TCTTAACCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4066515 1597 + 4267968 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTGAGGCTGGAGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGAGCAGTGTCAATGAATCCAAACGCAGCGCAGAAAACTCCCGACTCAACA-GACACCTTTTCAAAGTTGA---AACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAAGATGCTGCATGGCATGCCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCCAATGCAGGTATACTGAGCTTGCAACTTCCCAGCAAGGTCAGCACCAGCACCATGGCAGACGGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAGTTAAAGGTGGCTTTCGACATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAATGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCCTGCTTCGTGTCAATGTACCTACCTTCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCGATGCCAGTTCCTGCCAGCAAAGCTCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCATCTGTACAGCTAGTCCATGCCAACCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTCCCTGCCAGCCATTGACTTGTGTGTACAGTTCTTGCAATACTACTTGCTGTGT-GCCTTCCCATTGCCAGCCACTTCACTGTCAACTGGTTCCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGCCCCTTGTTCCATAAAGAACTGTTGCAAACCAGCTTCTTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCCCTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTAGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAATCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCCCTCTTCACACCTCCTCTGAGGGTCTGCGGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCCTGATTCCACCTTCACATTCTCTCCAGGTGCTGACCAGGGAACTTGTCCAGGCAC----GAAGAGATCCT----TCTTAACCG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2046372 1600 - 2193130 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTGAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAAGAGCAGTGTCAACGAATCCAAATGCAGCGCAGAAAACTCCCGACTCAACA-GACACGTTTTCAAAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAAGATGCTGCACGTCGTGCCAACA--CCCC-TAGTGAAGGACTACAAAAGCCCCTCTGTTTCGGATGTCTTTCCAATGCAGGTATACTGAGCTTGCGACTTCCCAGCAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCGTTCCAGCTGTGCCCACCATCACCACATACCCAATTAAAGGTGGCTTTCGACATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCACTGGTGCCCCAAGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTTCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCGCGCAGCCTGCTATCAGTCCGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTTGGAATCTACTTGTTGTCAGGAAAAGTGCTGCGATGCCAGTCCCTGCCAGCAAAGCTCCGGCCAGCAACCTATCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGACGTGATCTCCTGTCCGGAAACTTCTCGCCTACCAACCGTCTGTACAGCTAGTCCATGCCAATCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGATGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTCCCTGCCAGCCATTGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGTGT-GCCTTCCCATTGCCAGCCACTTCACTGCCAACCAGCTCCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGCCCCTTGTTCTGCAAAGAACTGTTGCAAACCAGCTTCCTGTGACACCGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCCCACAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACAGGTTTAGGCACATCACCCAGTGGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGTAAGGCAACACTTTGTTAATGGAGGACTCTTCACATCTCCTCTTAGGGTCTGCAGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCAA----------------GTACAAATGCTGCCTGCTTTCCAACTTTACCCTGATCCCACCTCCACATTCTCTCCAGGTCCTGACCAGGGAACTTGTCTAGGCAC----GAAGAGATCCT----TCTTAACTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30120408 1598 - 77216781 AGGAAGAGCAG--------GGCCGCTCTGGCTTGGTAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTCAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACGAATCCAAATGCAGTGCAG--AACTCCCGACTCAACA-GACACATTTTCAAAGCTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGTTAATCAGATGTTTGCATGCTAGTGAGTAAAAACAATAACAAGGAAAGATGCTGCATGTTGTGCCACCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAATTAGAAGCGACTTTCGGCATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCTTGCTTCGTGTCAACCTACCTGCATCCCAGCAACATCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAAATCCTGCCAGGAATCTGTCTGCATGTCTGGATCTTGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCGTCTGTACAGTTAGTCCATGCCAACCAACTGGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTTCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACAGCCAACCGGCTGCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACCTGTGATGGACCCACTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGGTGCCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAATCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCACTCTTCACACCTCCTCTGAGGGTCTGCCGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGCCTACCTCCACATTCTTTCCAGGTGCTGACCAGGTAACTTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28033268 1598 - 80997621 AGGAAGAGCAG--------GGCCGCTCTGGCTTGGTAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTAAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACAAATCCAAATGCAGTGCAG--AACTCCCGACTCAACA-GACACATTTTCAAAGCTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGTTAATCAGATGTTTGCATGCAAGTGAGTAAAAACAATAACAAGGAAAGATGCTGCATGTTGTGCCACCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAATTAGAAGCGACTTTCGGCATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCTTGCTTCGTGTCAACCTACCTGCATCCCAGCAACATCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAAATCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCGTCTGTACAGTTAGTCCATGCCAACCAACTGGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTTCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGGCACTTCACAGCCAACCGGCTGCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACCTGTGATGGACCCACTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGGTGCCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAATCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCACTCTTCACACCTCCTCTGAGGGTCTGCCGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGTCTACCTCCACATTCTTTCCAGGTGCTGACCAGGTAACTTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2089863 1598 + 10377808 AGGAAGAGCAG--------GGCCGCTCTGGCTTGGTAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTAAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACGAATCCAAATGCAGTGCAG--AACTCCCGACTCAACA-GAAACATTTTCAAAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGTTAATCAGATGTTTGCATGCAAGTGAGTAAAAACAATAACAAGGAAAGATGCTGCATGTCATGCCACCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAATTAGAAGCGACTTTCGGCATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACATGCCAAGACAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCTTGCTTCGTGTCAACCTACCTGCATCCCAGCAACATCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCCGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAAATCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCGTCTGTACAGTTAGTCCATGCCAACCAACTGGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTTCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGCGT-CCCTTCCCTTTGCCAGGCACTTCACAGCCAACCGGCTGCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACCTGTGATGGACCCACTTCCTATAACCAGAGTGGTTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGGTGCCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAATCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCACTCTTCACACCTCCTCTGAGGGTCTGCCGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGTCTACCTCCACATTCTTTCCAGGTGCTGACCAGGTAACTTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1975283 1598 - 8458610 AGGAAGAGCAG--------GGCCGCTCTGGCTTGGTAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTAAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACGAATCCAAACGCAGTGCAG--AACTCCCGACTCAACA-GACACATTTTCAAAGTTGGAACAACATC-TCCCAGGCTCCTGGAGCCTGTTAATCAGATGTTTGCATGCAAGTGAGTAAAAATAATAACAAGGAAAGATGCTGCATGTCGTGCCACCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGTGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAATTAGAAGCGACTTTCGGCATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCTTGCTTCGTGTCAACCTACCTGCCTCCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAAATCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCATCTGTACAGTTAGTCCATGCCAACCAACTGGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTTTCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAACTGGCTGCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACCTGTGATGGACCCACTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGATGCCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAATCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAACACTCTTCACACCTCCTCTGAGGGTCTGCCGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGTCTACCTCCACATTCTTTCCAGGTGCTGACCAGGTAACTTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64919553 1598 + 75148670 AGGAAGAGCAG--------AGCCGCTCTGGCTTGGTAGAGGCCCCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTACTTCAGTAAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACGAATCCAAATGCAGTGCAG--AGCTCCCGACTCAACA-GACACATTTTCAAAGTTGGAACAACATG-TCCCAGGCTCCTGAAGCCTGTTAATCAGATGTTTGCATGCAAGTGAGTAAAAACAATAACAAGGAAAGATGCTGCATGTCATGCCAGCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAGTTAGAAGCGACTTTCGGCATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCTTGCTTCGTGTCAACCTACCTGCCTCCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCAACCTGTGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAGCCATCCCGCTCGGAATCTACCTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAACTCCTGCCAGGAATCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCACCTGTCCGGAAACTTCTTGCCTACCAACCGTCTGTACAGTTAGTCCATGCCAACCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTTCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAACCGGCTGCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCTTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGGTGCCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAATCCAGCTGTGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCACTCTTCACACCTCCTCTGAGGGTCTGCCGCTGTCTACAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGTCTACCTCCACATTCTTTCCACGTGCAGACCAGGTAACTTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2159583 1598 + 4244037 AGGAAGAGCAG--------GGCCGCTCTGGCTTGGTAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGGCCTGCTTCAGTAAGGCTGGGGAGCAACCTGTAAAAGGGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACGAATCCAAATGCAGTGCAG--AACTCCCGACTCAACA-GACACATTTTCAAAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGTTAATCAGATGTTTGCATGCAAGTGAGTAAAAATAATAACAAGGAAAGATGCTGCATGTCGTGCCACCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACAGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAATTAGAAGCGACTTTAGGCATGCTCTCTGTTTGCCTAGTTCCTGCTACAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCCCAAGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTCCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCGACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAACCATCCTGCTCGGAATCTACTTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAGCTCCTGCCAGGAACCTGTCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGAAGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACCGTCTGTACAGTTAGTCCATGCCAACCAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATGTTCAAGCCTTGCCAATTAGCCCTCTACATGCCTGTTTCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTAGTTGCTGTGT-GCCTTCCCTTTGCCAGCCATTTCACTGCCAACCGGCTGCTTCCACATGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGGTGCCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAATCCAGCTGCGAGTCCAGCTTCTGCAAGGCAACACTTTGTTAATGGAGCACTCTTCACACCTCCTCTGAGGGTCTGCCACTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGTATACCTCCACATTCTTTCCAGGTGCTGACCAGGTAACTTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2182590 1597 + 4569836 AGGAAGAGCAG--------GGCCCCTCTGGCTTGGTAGAGGCCTCCTGATGAAAGGTTAGTGCCAGGAAAGG-CTGCTTCAGTAAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCAAGAGCAGGCGCAGTGTCAACGAATCCAAATGCAGTGCAG--AACTCCCGACACAACA-GACGCATTTTTAGAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGTTAATCAGATGTTTGCATGCAAGTGAGTAAAAACAATAACAAGGAAAGATGCTGCATGTCGTGCCAGCA--CCCC-TAGTGAAGGACTATAAAAGCCCCTCTGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTCCCAGAAAGGTCAGCACCAGCACCATGGCAGACCGCTGTTGTCCTGGAAACACCACAGCCATTCCAGCTGTGCCCACCATCACCACATACCCAATTAGAAGCGACTTTCGTCATGCTCTCTGTTTGCCTAGTTCCTGCCACAGCAGAACGTGGCAACTGGTCACTTGCCAAGAAAGCTGTCAGCCATCCATTGGTGCCTCAAGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTCCCAGCAACGTCTTGTGTGGGTTTTGTTTGCCAACCTATGTGCTCCCACGCAGCCTGCTATCAGTCTGGCACTGGTCAGCCTCCTTGTCTGGTTAGCTCATGTCAACCATCCTGCTCAGAATCTACTTGTTGTCAGGAAAAGTGCTGCAATGCCAGTCCCTGCCAGCAAAACTCCTGCCAGGAACCTATCTGCATGTCTGGATCATGTCAGGCAGCTTGTGGCCAATCAGTCTGCTGTGATGCTGGATCCTGCCAGCCATCCTGCTCTGACGTGACCTCCTGTCCGGAAACTTCTTGCCTACCAACTGTCTGTACAGTTAGTCCATGCCAAACAACTTGGTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCTCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAATCAGCCCTCTACATGCCTGTTTCCTGCCAGCCATCGACTTGTGTGTTCAGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAACCGGCTGCTTCCACATGCTTTATCTACCAGCCAGTGGCTAACTGCCAGGTCCCTTGTTCCGCAAAGGACTGTTGCAAACCAGCTTCCTGTGACACTGTGACTTCTGGCCAACCAACTTGTCATGGACCCACTTCCTATAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACTGGTTTAGGCACATCACCCAGTGGTGCCTC------------------------------------------CAGTTGCT-----------------------T------------------------------------------GCCA-------------------ACTTCATGCCAACCCAGCTGTGAGTccagcttctgcaaggcagcactttgttaatagagcactcttcacacctcctctcagggtctgcCGCTGTCTGTAAATGCATAGCCATCCC-TGGGTGC----CTGCCTCC-------CACCGA----------------GTACAAATGCTGCCTGCTTTCTAACTTTACCGTGAGTCTACCTCCACATTCTCTCCAGGTGCTGACCAGGGAAATTGTCCAGGCAC----AAAGAGATCTT----TCTTAACCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46138409 1599 - 159171411 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGGTAGTGCCAGGAAGGGCCTGCTTCAGTGAGGCCGAGGAGCAACCTGTAAAAGAGACAGCTCATCCCAGAGCAGGAGCGGTCTCAGGGAAGCCAAATGCAGCACAGAAAACTCCCGACTCAACA-GACACCTTTTAAAAGTTGGAGCAGCATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAA-ATGCTGTATGTCATACCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCTTATGTATTGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCCTCTTCCCAGCAAGGTTCACACCAGCACCATGGGAGACAGCAGTGGTCCTGGAAACACCACGGCCCTTCCAGCTGTGCCCACCATCTCCACATGCCCAGTTAGAGGCGGCTTTCGACATGCTATCTGTTTGCCTAGTTCCTGCCACAGCAGGACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCAACGGTGCCCCACGTGGCTGTGATCCTGCTTTGTGTCAACCTACCAGCCTTCCAGGAATGTCATGTGTGGGTTTTGTTTGCCAACCTGTGTGCTTCTGCGCAGCCTGCCCTCAGTCTGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAACCACCCTGCTCGGAATCTACATGTTGTCAGGAAGAGTGCTGCGATGCCAGTCCCTGCCCGCAAAGCTCCTGCCGGGAATCTGGCTGCGTGTCTGGGTTATGTCAGGCAGCTTGTGGCCAATCAGTCGGCTGTGATGCTGGATCCTGCCAACCATCCTGCTCTGAAGTGACCTTCTGTCCTGAAACTTCTTGCCTACCAACCATCTGTACAGCTAGCCCATGCCAACCAACCTGCTGCCAAGGAAGTTCATGTCAACCAGTCAGCGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTGTATTTTCAAGCCTTGCCAACCAGTCCTCTGTGTGCCTGTTCCCTGCCAGCCATCGACTTGTGTGTTTGGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAACCAGCTCCTTCCATATGCTTCATCTACGAGCCAGTAGCTAACTGCCAGGCCCCTTGTTCTGCAAAGAACTGTTGCAAACCAGCTTCCTGTGACATTGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCCTACAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGCGTGACAGGTTTAGGTGCATCACCCAGTGGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGGAACACTTCATTAATGGAGCACTCCTCACACCCCCTCTGAGGGTCTGCAGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCATCC-------CACTGA----------------GTACAAATGCTGCCTGTTTTCTAACTTTACCCTGAGTCCGCCTCCACATTCTCCCCAGGTGCTGACCAGGGAACTTGTTCAGGCAA----GAATAGATCCT----TCTTAACTA i calJac3.chr5 C 0 I 307 s saiBol1.JH378271 1848083 1598 + 3513951 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGGTAGTGCTAGGAAGGGCCTGCTTCAGTGAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCAT-CCGGAACGGGAGCAGTCTCAGCGAAGCCAAATGCAGCGCAGAAAACTCCCAACTTGACA-GGCACCTTTTAAAAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCCTGCAAACGAGTAAAAACAATAACAAGGAAA-ATGCTGCATGTCACTCCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCTATGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCAACTTCCCAGCAAGGTCCACACCAGCACCATGGGAGACAGCAGTGGTCCTGGAAACACCACGGCCCTTCCAGCTGTGCCCACCATCTCCACATGCCCAATTAGAGGCGGTTTTCAACATGCTATCTGTTTGCCTAGTTCCTGCCACAGCAGGACGTGGCAATTGGCCACATGCCAGGAAAGCTGTCAGCCATCCAACAGTGCCCCATGTGGCTGTGATCCTGCTTCGTGTCAACCCACCTGCCTTCCAGGAACGTCGTGTGTGGGTTTTGTTTGCCAACCCGTGTGCTTCTGTGCAGCCTGCCATCAGTCCGGCACTGGTCAGCCTCCTCGTCTGGTTAGCTCATGTCAACCACCCTGCTCGGAACCTATGAGTTGTCAGGAAGAGTGCTGCGATGCCAGTCCCTGCCCACAAAGCTCCTGCCGGGAACCTGGCTGCATGTCTGGGTCATGTCAGGCAGCTTGTGGCCAATCAGTCGGCTGTGATGCCGGATCCTGCCAACCATCCTGCTCTGAAGTGACCTCCTGTGCTGAAACTTCTTGCCTACCAACCATCTGTACAGCTAGCCCATGCCAACCAACCTGCTGCCAAGGAAGTTCCTGTCAACCTGTCAGTGGTGAAGTCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTGTATTTTCAAGCCTTGCCAACCAGTCCTCTGCATACCCGTTCCCTGCCAGCCATCAACTTGTGTGTTTGGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAACCGGCTCCTTCCATACGCTTCATCTACCAGCCAGTGGCTAACTGCCAGGCCCCTTGTTCTGCAAAGAACTCTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCCTACAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACAGGTTTGGGTGCATCACCCAGTGGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGGAACACTTTGTTAACGGAGCACGTCTCACACCTCCTCTGAGGGTCTGCAGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCATCC-------CACTGA----------------GTACAAATGCTGCCTGTTTTCTAACTTTACCCTGAGTCCGCCTCCACATTCTCCCCAGGTGCTGACCAGGGAACTTGTTCAGGCAC----GAAGAGATACT----TTTTAACCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1899203 1598 + 1920343 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGGTAGTGACAGGAAGGGCCTGCTTCAGTGAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCCAGAGCGGGAGCAGTCTCAGCGAAGCCAAATGCAGCGCAGAAAACTCCCGACTCGATA-GACACCTTTTAAAAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAA-ATGCTGTATGTCATACCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCTATGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCAACTTCCCAGCAAGGTCCACTCCAGCACCATGGGAGATAGCAGCGGTCCTGGAAACACCACGGCCCTTCCAGCTGTGCCCACCATCTCCACATGCCCAATTAGAGGCAGCTTTCGACATGCTATCTGTTTGCCTAGTTCCTGCCACAGCAGGACGTGGCAACTGGCCACATGCCAAGAAAGCTGTCAGCCATCCAACGGTGCCCCATGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTTCCAGGAACGTCGTGTGTGGGTTTTGTTTGCCAACCTGTGTGCTTCTGCGCAGCCTGCCATCAGTCCGGCACTGGTCAGTCTCCTTGTCTGGTTAGCTCATGTCAACCACCCTGCTCGGAATCTACGTGTTGTCAGGAAGAGTGCTGTGATGCCAGTCCCTGCCCGCAAAACTCCTGCCGGGAAGCTGGCTGCACGTCTGGGTCATGTCAGGCAGCTTGTGGCCAATCAGTCGGCTGTGATGCTGGACCCTGCCAACCATCCCGCTCTGAAGTGACCTCCTGTGCTGAAACTTCTTGCCTACCAACCATCTGTGCAGCTAGCCCATGCCAACCAACCTGCTGCCAAGGAAGTTCCTGTCAACCTGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTATATTTTCAAGCCTTGCCAACCAGTCCTCTGCATGCCTGTTCCCTGCCAGCCATCAACTTGTGTGTTTGGTTCTTGCAATACGACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAATCGGCTCCTTCCATATGCTTCATGTACCAGTCAGTGGCTAACTGTCAGGCCCCTTGTTCTGCAAGGAACTGTGGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCCTACAATCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACAGGTTTAGGTGCATCACCCAGTGGTGGCTC------------------------------------------CAATTGCT-----------------------T------------------------------------------GCTG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGGAACACTTTGTTAATGGAGTACTTCTCACACCTCCTCTGAGGGTCTGCAGCTGTTTATAAATGCATAGCCATCCC-TGGGTGC----CTGCATCC-------CACTGA----------------GTACAAATGCTACGTGTTTTCTAACTTTACCCTGAGTCCACCTCCACATTCTCCCCA-GTGCTGACCAGGGAACTTGTTCAGGCAC----GAAGAGATCCT----TCTTAACCA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7013115 1600 - 7032639 AGGAAGAGCAG--------GGCCACTCTGGCTTGGCAGAGGCCTCCTGATGAAAGGGTAGTGCCAGGAAGGGCCTGCTTCAGTGAGGCTGGGGAGCAACCTGTAAAAGAGACAGCTCATCCCAGAGCGGGAGCCGTCTCAGCGAAGCCAAATGCAGCACGGAAAACTCCCGGCTCAACA-GACACCTTTTAAAAGTTGGAACAACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGCATGCAAATGAGTAAAAACAATAACAAGGAAA-ATGCTGTATGTCATACCAACA--CCCCATAGCGATGGACTATAAAAGCCCCTATGTATCGGATGTCTTTCAAATGCAGGTATACTGAGCTTGCGACTTTCCAGCAAGGTCCACGCCAGCACCATGGGAGACAGCAGTGGTCCTGGAAACACCACGGCCCTTCCAGCTGTGCCCACCATCTCCACATGCCCAGTTAGAGGCGGCTTTCGACATGCTATCTGTTTGCCTAGTTCCTGCCACAGCAGGACATGGCAACTGGCCACATGCCAAGAAAGCTGTCAGCCATCCAATGGTGCTCCACGTGGCTGTGATCCTGCTTCGTGTCAACCTACCTGCCTTCCAGGAACGTCGTGTGTGGGTTTTATTTGCCAACCTGTGTGCTTCTGTGCAGCCCGCCATCAGTCCGGCCCTGGTCAGTCTCCTTGTCTGGGTAGCTCACGTCAACCACCCTGCTCGGAATCTACATGTTGTCAGAAAGAGTACTGCGATGCCAGTCCCTGCCCACAAAGCTCCTGCCGGGAACCTGGCTGCATGTCTGGGTCATGTCAGGCAGCTTGTGGCCAATCAGTCGGCTGTGATGCTGGATCCTGCCAACCATCCTGCTCTGAAGTGACCTCCTGTCCTGAAACTTCTTGTCTACCAACCATCTGTACAGCTAGCCCATGCCAACCAACCTGCTGCCAAGGAAGTTCATGTCAACCCGTCAGTGGTGAAGGCCAGCCCTGTAAATCAACTTATTATCAACCCATCTGCTGTATTTTCAAGGCTTGCCAACCAGTCCTCTGCATGCCTGTTCCCTGCCAGCCATCGACTCGTGTGTTTGGTTCTTGCAATACTACTTGCTGCGT-GCCTTCCCTTTGCCAGCCACTTCACTGCCAACCGGCTCCTTCCATATGCTTCATCTACCAGCCGGTGGCTAACTGCCAGGCTCCTTGTTTTGCAAAGAACTGTTGCAAACCAGCTTCCTGTGACACTGTGATTTCTGGCCAACCAACTTGTGATGGACCCACTTCCTACAACCAGAGTGGCTGCA---------------AAT---------------CAGCTTGCTGTGTGACAGGTTTAGGTGCATCACCCAGTGGTGGCTC------------------------------------------CAATTACT-----------------------T------------------------------------------GCCG-------------------ACTTCATGCCAACCCAGCTGTGAGTCCAGCTTCTGCAAGGGAACACTTTGTTAACGAAGCACTCCTCACACCTCCTCTGAGGGTCTGCAGCTGTCTATAAATGCATAGCCATCCC-TGGGTGC----CTGCGTCC-------CACTAA----------------GTACAAATGCTGCCTGTTTTCTAACTTTACCCTGAGTCCACCTCCACATTCTCCCCAGGTGCTGACCAGGGAACTTGTTCAGGCAC----GAAGAGATCCT----TCTTAACCA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22840608 1578 + 28711273 AGTGAGAACAG--------GGCT-CTCTGGCGTGATGTGGGCCTCCTGATGAGAGGTTAGTGCCGGGAAAAGCCTGCTTTAGCGAGGCTGGGGTATACCCTATAAAAGAGACAGCTCATCCCAGA-----------------GAATCCAAAGTCAGCAATGAAAACTCTCAACTAAAAA-GATACATACTTGAGGTTGG----------------GCTCCTGAAGCCTGATAATCAGATGTTTGCATACAAATGAGTAAAAACAATAACAAAGAAAGATGCTATAGGTTGTGCCAACT--CCCC-TGGTGAAGAACTATAAAAGCCCCTGTGTACTGGATACCTTTCAAACTCAAGTGTACGGAGTGTGCGACCTTCCAGCTGGGTCAGCACCAGCACCATGGTGGACAGCTGTTGTGCTGGAGACACCACTGCCATTCCTGCTGCACCCACTGTCTCCACATGCCCAGGTGGTGGCCGCATCCGATATGCAATCTGTTTGCCCAGTTCCTGCCAGAGCAGGACATGGCAGCTGGCCACAGTCCAGGAAAACTGTCAGGTGTCCAGTGGTGCCTCAAGTGGCTGTGAACCTGCTTCATGCCAAACCACCTGCCTTCCATCTGCCTCTTGTGTGGGTTTTACTTGCCAACCCATGTGCTCCCGCATAGCTTCCTGTCAATCTGGAGCTGGTCAG---------------------------CCACCCTGCTTAGATGCCACCAGGTGTCAGGTGAAGTGCTGTGATACCAGTCCCTGCCAGCAAAGCTCCTGCCAGGAACCTGTCTGCACCTCTGGATCATGTCGGGCAGCTTGTGACCCATCTGTCTGCTGCGATGCTCTATCCTGTCAGCCATCCTGCTCTGAAGTGACCTCCTGCCCTGAAACATCCTGCCCACCAATCATCTGTACAGCTAGTCCAAGCCAACCTACTAGCTACCAAGGAGGTTCATGTCAACCCATCTGGGGCAAAGGCCAGATCTGTAAACCAGCATATTACCAACCCATCTGCTACGTCCTCGAGACTTGCCAGTCACTTCCCTGCGTGCCTGCTCCCTGCCAGCCTTTGACTTATGTGTTCAGTTCTTGTGATCCTACCTGCTGTGT-GCCCTCCTTTTGCCAACCA---------------GCTCCTTCCATATCTTTCGTCTGCCAGCCAGTGGCTACCTGCCAGTCCTCTTGTTCTGCATTGAATTCTTGCAAGTCAACTTCCTGTGGTGCTGTGCTTTCTGGCCAACCAATTTGTGACGACCCCCCTTCCCGTAACCAAAGAGGCTACAAATCTTCTTCCCGTCAAT---------------CAGCATGCTGCGTGACAGGTGTAGGCATACCATCCAGTGGTGGCTCTCCTTGCTTCCAACCAACTTCCCCAAATCTCTGCAAGGCAAACACTCGCT-----------------------T------------------------------------------GGTG-------------------ACTTCCTGCCGACGCAGCTATCAGTCCAGCTTCCGGAAGGGAGCGCTTTGTTGACGGAGCACTCTTCACACCTGCTCTGATGGTTTGCCACTGTCTGCACCTGCACAGCCACCCCATGGGTGCCTGTCTGCCTCT-------GACCGA----------------GCACAAACAATGCTTGCTTTCTAACTTTACCCCGAGCCTAGCCCCACATCGTCTCCAAGTCAGGACTAGGGAACTTGCCCAGTCAC----TAAGAAATCCA------------- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22103154 1614 - 122082543 AGGAAGAGCGG-------------CTTCCTCTTGGAGGAGGCCTCCTGATGAGAGGGTACTG--AGGAAAAGCTTGCTTTGGTGAGGCTGAGGAACAACCTGTAAAAGAGACAGCTCATCCCAGAGT---------------GCATCCAAATTCGGCAAAGAAAACTCCCAG------------------------TGG--CGGCCTCGTCCAGGGCTCCTAAAGCC--CTCACCTGATGTTTATATGTAAATGAATAAGAATACCAACAAGGAAAGATGCTGTAGGCAGGGCCAACAACACCC-CAGGGAAGGACTATAAAATCCCCTTGGAATCAGATGCCTTT----TTCAAACGGATGGTTCTTGCAGACTCCCAGCCTGGCTAGTAGGAACACCATGGCAGACAGCTGTTGCCCTGAAAACCCCACAGCTGTTCCAACTGTGCCCACCATCTCTACATGCTCCAATGGTGGCAGCATTAGAAATGCTATCCGTTTACCCAGTTCCTGCCGGTGTAGGACATGGCAACTGGTTACACATCAAGAAAACCGTCAAGGACCCGACAGTGTCCCAGTTAGCTCTGAACCTGTTTCTTGTCCATCCACCTGCTTCCCAGAAACTCCCTGTGTGGGTTTTATTTGCCAACCCATAGGTTCACACATGGCCTGCTGTGCATCTGACACTGGTGGGAGTCCTCATCCTGCTGCTTCATGCCAGCCCTCCTGTCTGGAATCTGCTGGTTGTCACACGATGTGCTACGAGAACAGCTCCTGCCACCAGAGCTCCGGCCAGGGATCTGCCTGCACATCTGGGTCATGCCAGACAGCATGTGGCCCATCAGCGTCCTGTGATGACAGATCCTGCCAGCCATCCTGCTCTGAAGCAACATCCTATGCTGAGACCCCGTGTCTACCAGCTGGCTGTGAGGCTGGCTCGTGCCAACCAACCAGCTGCCAAGGCGGGTCACATCAACCCACCAGAGGTGAAGGTCAGCTCTGTCAGTCAGTTTATTACCAACCTATCTGCTATGTTCTTAAGTCCTGCCAGTCAACTCCCTGCATGTCTGTCTCCTGCCAGCCATTAACTTGTATGT---GCTTTTGCAGTCAAACTTGCTGTGT-GCCCCCCACTTGCCAGCCACTTCACTGTCAAACAACGCCTATAATCTCCTTCATCTGCCAGCCTGTGGCTCCCTGCCAGTCCCCCTGTTTTTTAAAGAGCAGCAGTAAATCAGCTTCGTGTG---TTATGATTTCTGGCCAACAGATTTGTGGTGGACCCACTCCC---GATCAGAGTGGCTGCC---------------AATCTCCTTCCTGCCATCCCCCTTGCTGTGTGACTGGTTTAGGTCAACCTTCCAGCAGTGGGCC------------------------------------------TGGTTGCTGTCCACCAACCTCTCCAGACATAT------------------------------------------GCCAAGCGGGCACCTATGGACCCACTTCTTGACAACCTAGCTGTGAGTGCAGCCTCCCCAAGGCCAAACTTCA-TGATGGAACTCTGCTCATAACTCTTCTGAGGGTGTGCTATAGTCCTCAAGTATGGAGCCACCGA-TGGGTGC----CTGCCTCCAGCTCTGCACAGACATTGCCTCCAGACCTGTACAGGCATCGCCTCCTCTCTGGTTTT-CCTGGAGTTCAGACTCACATTCTCTCCAAGTGCTGAGGAGAGGACTTGT-CAGCTCT----GAGGAGATCTT----ACCCA---- i mm10.chr11 C 0 C 0 s canFam3.chr9 21453833 1662 + 61074082 AGAAAGAGCAGACTGCTCAGACTGCTTTGGCTGAGCTGAGGCCTCCTGATGAGAGGTTAGTTTAGGGAAAAGCCTGCATCAAGGCGGCTGGAGAACAACCTGTAAAAGAGACAGCTCATCCCAGAGCAGGAATAGCATCGATGAATCTAAACCCAGGAAAGATAACTCTCAACTCAACA-GACAAGTTTTTAAACTGGGGATAATATC-TTCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTGTATGCAAATGGGTGGAAACAATAACACGGAAAGATGCTCTAAGCTGTACCAACA--CCCC-TAGTGAAGGACTATAAAAGCCCCCATGTATTAGATGTCTTTCACACTCGGGTATACTGAGTTTGCAACTTCCTAGCAAGGTTAACGCCAGCACCATGGTGGACAGCTGTTGCCCCAGAACCACCATGACCGTTCCAGCTGTGCCCACTTTC---ATATGCTCAAATGGCGGTAGCTTCCGAAATGGTATCTGTTTGCCTAGTTCCTGCCGGAGCAGAACGTGGCAACTGGTCACATGCCAAGAAAGCTGTCAGCCATCCAGCAGTGCCCCAAGTGGCTGTGAACCTGCTTCTTGCCAACCTACCTGCCTTCCAACAACTTCTTCTGTTGGTTTTGTCTGCCAACCCATTTGCTCCTGTACGGCCTGCTATGAATCTGGCACTGGTCAGTCTCCATGTCTGGTTAGCTCATGCCAACCCTCCTGCTCAGAATCTACCAGTTGTCAGGTAAATTGCTGTGAAGCCAGCCTCAACCAGCAAACCTCCTGCCAAGAACCTGTCTTTGTGTCTGGATCATGCCAGGCAGCTTGTGGCCAATCGGTCTGCTGTGACACTAGGTCCTGCCAGCCATCCTGCTCTGAAGTAACTTCCTGTGCTGAAAATTCTTGCCCACCAACCATCTGTGCAGCTAGTCCATGCCAGTCAACTTGCTGCCAACAAGGTTCATGTCAACCCACTAATGGCAAAGATCAGCTCTGCAAATCAACTTATTACCAACCCATCTGTTACATTTTTAAGACTTGCCAATTGGTTCCCTTTATGCCTGTTCCCTGCCAGCCGTCAACTTGTGTGTTCAGTTCTTGCAATCCTACATGCTGTGT-GTCCTCCCTTTGCCAGCCACTTTACTGCCAACCATCTCCTTCGATATCCTTCGTCTGCCAGCCAGTGGCTAACTGCCAGCCCCCATGTTTTGTAAAGAACGCTTGCAAACTAGTTTCCTGTGGCACCATGCTTTCTGGCCAACCAACTTGTGATGGATCCACTTCCTGCAACCGAGATGTCTGCA---------------AATCCCCTTCCTGTCAACCAGCTTGCTGTGTGACAGGTTTAGGCAAACCATCCAGCGGTGGCTG------------------------------------------CAATTGCT-----------------------TTTGACCAACTGCCCCAAGTCTCTGCAAAGCCAGCATCTGCTCGCTA-------------------ACTTCCTGACAACTCAGGCATAAGTCCAGCTGCTGTAAGGCAACGCTTCACTGATGCAGCACTCTCCACATTTCT----GAGGTCTGCCACTATCTGCAAATGCATTGCTACCCT-GTGGTGT----CCTTTTCC-------GACTGA----------------GTGCAAATGCTATCTGCATGCTAACTTCATTCTCAGTCCAGCCCCACATTCTATCCAGGGGCTGACGAGGGAATTTGCCCAGGCACTAAGAAAGAGATCTT----TCTTTATCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 456904 1643 - 852752 AGGAAGAGTGG--------GGCTGCTTTGGCTTTGCTGAGGCCTCCTGATGAGGGGTTAGAGC--AGAAAGGCCTGCTTCAGGGCGGCTGGGGAACAACCTGTAAAAGACACAGCTCATCCCAGAGCAGGAGTGGCATGAATGAATCCAAATTCAGCAAAGAAAACTCCCAGCTCAACAGGAAGTTTTTTAAAAATAGGGATAACATC-TCCCAGGCTCCTGAAGCCTGCTAATCAGATGTTTTTATGTACATGTTTATAAGCAATAACAAGGAAAGATGCTTTAGGTTGTGCCAACA--CCCA-TGGCAAAGAACTATAAAAGTCCCTGTGGGTTAGATGTCTTTGAAACTCAGCTATACTGAGTTTGCAACTCTGCAGCAAGGTTAGCGCCAGCACCATGGCAGGAAGCTGTTGTCCTGGAAATGCCAAGACCATGCCAGCTGTGCCCACCATCTCCATATGCCCACCTGGTGGAAGCTTCCAAAATGCTATCTGTGTGCCCAGTTCCTGCCAGAGCAGAACATGGCATCTGGTCACCTGCCAGGACAACTGTCAGCTCTCCAGCCATGTCTCAAATGGATGTGAACCCGCTTCCTGCCAATCTACCTGCCTTCCAGCAACTTCTTGTGTGGGACTTGTCTGCCAACCCATTTGCTCCCGCGCAGCTTGCTATGAATCTGGCACTGGTCAGTCTTCCTGTCTGGTTAGCTCACACCAGCCATCCTGCTCAGAGTCCATCAGTTGTCAGGCAAAGGCCTGTGATTCCAGCCCCTGCCAACAGAGCTCCTGCCAGGAAGCTGTCTGTGTGTCCAGAGCATGCCAGACAGCTTGTGGACAATCAGCTAGCAGTGACGCTAGATGCTGCCACCCATCCTGCTCCAAGGTAACTTCCTGTCCTGAAACTTCTTGCCAACCAACCATCTGTGTGTCTAGCCTGTGCCAGTCAACTTGCTGTCAA-GCAGATCATGTCCGCCCATTAATTGTGAAGGCCAGCCCTGCCAATCAACTTATTACCAACCCATATGCTACATTTTCAAGCCTTGCCAATCAGTTCCTCACATGCCTGTTGCCTGCCAGCCATCAATTT-TGCATTTAGTTCTTGCAATCCAACTTACTGTGTGGCCCTCCCCTTGCCAGCCATCTCACTGCCAACCAGCATCTTCCATCTCCTTCACCTGCCAGCCAGTGGCTATCTGCCAGTCCCCTTGTTCTATAAAGAACCCTTGCAAATCAGCTTCCTGTGGCACCATGCTTTCTGACCAACCAACTTGTGGTGGGTCCACTTTTTGCAACCTAAGTGGCTGCA---------------AATTCCCTCCCTTCCAACCGGCTTGCTGTGTGACAGGCTTAGACAAATCATCCAGTGGTTGCTCTAAATGGTTCCGACCGACTTCCCCAAGTTTCTGCAAAGAAAGCAGCTGTT-----------------------T------------------------------------------GTCA-------------------ACTTCCTGCCAGCCTGGTCATGAGTCCAGCTTCTGCAAGACAACACTTTATTAATGGAGCATTCTTCACACCCCCTCTGAGGATCTGCCACTGCTGGCAGGTGCAAAGCCACTCCATGGGTGC----TTGTCTCC-------TGCTGA----------------GCACAAATGCCACCTGCTTTCTAGGCTTGCTCAGAGT-----------------CCAAGTGTTGATGAGGGAAATTGTCCAGGTGC----TAAGAGATGTTTGCCTCTTAACCA i dasNov3.JH570468 I 542 C 0 a score=4423330.000000 s hg38.chr17_JH159148v1_alt 5472 346 + 88070 AGAAT---AACCTTTCAGCAACCATGGACTACCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCTC--GTTGCTGCCAGCTGCTAATAAAAATGTGACTGGTTAAGTATAATAAATAAGACTCCTGGAGTGCTTTCATTCCTAC--ACACACCTCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCCTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTAGTGTCTAGGATTATAGATTCTCCAGCTGGACGAGAGTAAGGG s panTro5.chr17 16327657 346 + 83181570 AGAAT---AACCTTTCAGCAACCATGGACTACCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCTC--GTTGCTGCCAGCTGCTAATAAAAATGTGACTGGTTAAGTATAATAAATAAGACTCCTGGAGTGCTTTCATTCCTAC--ACACACCTCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCCTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTAGTGTCTAGGATTATAGATTCTCCAGCTGGACGAGAGTAAGGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16232542 346 + 83442489 AGAAT---AACCTTTCAGCAACCATGGACTGCCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCTC--GTTGCTGCCAGCTGCTAATAAAAATGTGACTGGTTAAGTATAATAAATAAGACTCCTGGAGTGCTTTCATTCCTAC--ACACACCTCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCCTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTAGTGTCTAGGATTATAGATTCTCCAGCTGGACGAGAGTAAGGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068112 346 + 4267968 AGAAT---AACCTTTCAGCAACCATGGACTACCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAACACCTC--GTTGCTGCCAGCTGCTAATAAAAATGTGACTGGTTAAGTATAATAAATAAGACTCCTGGAGTGCTTTCATTCCTAC--ACACACCTCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCCTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTAGTGTCTAGGATTATAGATTCTCCAGCTGGACGAGAGTAAGGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2047972 345 - 2193130 AGAAT---AACCTTTCAGCAACCATGGACTACCATAGTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAGA-------------CCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGCTT-----TTTCAGAAGACCCC--TTTGCTGCCAGCTGCTAATAAAAATGTGACTGGTTAAGTATAACAAATAAGTATCGTGGAGTGCTTTCATTCCTAC--GCACACCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGATCTGCAAGGGTAGCTGGTGTCTAGGATTATAGATTCTCCAGCTGGACGAGAGTAAAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122006 345 - 77216781 AGAAT----ACCTTTCAGCAACCATGGACTATCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------TCCT------------------CTCTTGTTTATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCT--TTTGCTGCTAGCTGCTAATAAAAATGTGACTGGTTAAGTATGATAAATAAGACTCTTGGAGTGCTTTCATTCCTAC--GCTCACCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAGCACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCTAGGATTATAGATTCTCCCGCTGGACGAGAGTAAGGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28034866 345 - 80997621 AGAAT----ACCTTTCAGCAACCATGGACTATCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------TCCT------------------CTCTTGTTTATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCT--TTTGCTGCTAGCTGCTAATAAAAATGTGACTGGTTAAGTATGATAAATAAGACTCTTGGAGTGCTTTCATTCCTAC--GCTCACCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAGCACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCTAGGATTATAGATTCTCCCGCTGGACGAGAGTAAGGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2091461 345 + 10377808 AGAAT----ACCTTTCAGCAACCATAGACTATCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------TCCT------------------CTCTTGTTTATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCT--TTTGCTGCTAGCTGCTAATAAAAATGTGACTGGTTAAGTATGATAAATAAGACTCTTGGAGTGCTTTCATTCCTAC--GCTCCCCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAGCACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCTAGGATTATAGATTCTCCCGCTGGACGAGAGTAAGGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1976881 345 - 8458610 AGAAT----ACCTTTCAGCAACCATGGACTATCACACTGCTCCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------TCCT------------------CTCTTGTTTATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCT--TTTGCTGCTAGCTGCTAATAAAAATGTGACTGGTTAAGTATGATAAATAAGACTCTTGGAGTGCTTTCATTCCTAC--GCTCACCCCTA-TGTAGATTTCCCTCAGGTCACATTT-GAGCACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCCAGGATTATAGATTCTCCCGCTGGACGAGAGTAAGGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64921151 346 + 75148670 AGAAT---AACCTTTCAGCAACCATGGACTACTACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCATTTTAGCAGA------------TCCT------------------CTCTTGTTTATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCC--TTTGCTGCTAGCTGCTAATAAAAATGTGACTGGTTAAGTATAATAAATAAGACTCTTGGAGTGCTTTCATTCCTAC--GCGCACCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAGCACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCTAGGATTATAGATTCTCCAGCTGGACGAGAGTAAGGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2161181 346 + 4244037 AGAAT---AACCTTTCAGCAACCATGGACTATCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------TCCT------------------CTCTTGTTTATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCC--TTTGCTGCTAGCTGCTAATAAAAATGTGACTGGTTAAGTATGATAAATAAGACTCTTGGAGTGCTTTCATTCCTAC--GCTCACCCCTA-TGTAGATTTCCCTCAGGTCACATTT-GAGCACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCTAGGATTATAGATTCTCCCGCTGGACGAGAGTAAGGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2184187 345 + 4569836 AGAAT---AACCTTTCAGCAACCATGGACTACCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------TCCT------------------CTCTTGTTCATCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACCCC--TTTGCTGCTAGCTGCTAATAAAAATGTGACAGCTTAAGTATGATAAATAAGACTCTTGGAGTACTTTCATTCCTAC--GCATA-CCCTA-TGTAGATTTCCTTCAGGTTGCATTT-GAGCACAATGAGCTTGAGTTATCTAAGTCAGTTG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCTGCAAGGGTAGCTGGTGTCTAGGATTGTAGATGCTCCAGCTGGACGAGAGTAAGGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46140315 346 - 159171411 agaaT---AACCTTTCAGCAACCGTGGACTACCACACTGCTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTTAGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACTCC--TTTGCTGCCAGTTGCTAATAAAAATGTGACTGGTTAAGTATAATAAATAAGATTTTTGGAGTGCTTTCATTCCTGC--ACACACTCCTA-TTTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CACTGGTCTACAGGGGTAGCTGGAATCTAGGATTATAGATTCTCCAGCTGGAAGAGAGTAAGGG i calJac3.chr5 I 307 C 0 s saiBol1.JH378271 1849681 339 + 3513951 AGAAT---AACCTTTCAGCAACTGTGGACTACCACACTACTGCTTGCATTTCCTGATGATGTCAATTCATTTCACTTT---AAA------------ACCT------------------CTCTTGTTTCTTTTTC--------TT--GATGCTGCCTCGTC-----TTTCAGAAGACTCC--TTTGCTGCCAGCTGCTAATAAAAATG----TGGTTAGGTGTAATAAATAAGACTTTTGGAGTGCTTTCATTCCTGC--ACACACCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAACGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CAGTGGTCTACAAGGGGAGCTGGTATCTGGGATTATAGATTCTCCAGCTGGAAGACAGTAAGAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1900801 347 + 1920343 AGAAT---AACCTTTCAGCAACCATGGACTACCACACTGCTGCTTGCGTTACCTGATGATGTCAATTCATTTCACTTTGGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACTCC--TTTGCTGCCAGCTGCTAATAAAAATGTAACTGGTTAAGTGGAATGAATAAGACTTTTGGAGTGCTTTCATTCCTGC--ACACACCCCTAGGGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CAGTGGTCTACAAGGGTAGCTGCTATCTAAGATTATAGATTCTCCAGCTGGAAGAGAGTAAGGG i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7014715 346 - 7032639 AGAAT---AATCTTTCAGCAACCGTGGACTACCACACTGCTGCTCGCATTTCCTGTTGATGTCAATTCATTTCACTTTAGCAAA------------CCCT------------------CTCTTGTTTCTCTTTC--------TT--GATGCTGCCTGGTC-----TTTCAGAAGACTCC--TTTGCTGCCAGCTGCTAATAAAAATGTGACTGGTTAAGTGTAATAAATAAGACTTTTGGAGTGCTTTCATTCCTGC--ACACACCCCTA-TGTAGATTTCCTTCAGGTCACATTT-GAACACAATGAGCTTGAGTCATCTAAGTCAGTGG-----------------------------------------------------------------------------------GTCTG----------CAATGGTCTACAAGGGTAGCTGCTATCTAGGATTATAGATTCTCCAGCTGGAAGAGAGTAAGGG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22842186 340 + 28711273 AGGAT---TATCTTTCAGCAAGCATGGTC---CGCTCTGTACCTTGCATTTCC---TGATGTCAATTCATTTTATTTCAGCAAA------------ATCT-------------------TCTCATTTTTCTTCCTTTTGATTTT--GATGATGCTTGGTC-----TTTCAGAAGACTCCTGTTGGCTGCCAGATGGTAATAAAAATGTGAATGATTAAGTATAATGAGTAAGACTCTTGAAGTGCTTTCATTCCTAG--ATACACACCTG-CATAGATTTCCTTCAGGTCACCCTT-GAACACAATGACCTTGGGCTGTCTACGTGTGTGG-----------------------------------------------------------------------------------GTCTG----------CATTGGTCT---------GTTGGTGTCTAGAATTATAGAGGCTCAAGCTGGAAAAAGGAAGGAG i otoGar3.GL873537 C 0 I 1560 s mm10.chr11 22104768 328 - 122082543 AGGGT---GGCCTGTCAGCAGGCATGGTCTGCCTTTC--CAGCATGCATTTCC---TGATGTCAGTTCATTTCATGTCAGCAAA------------ACCTTCTCTCCAATTCTCCTTTCTTTTGATTTTTTTTT--------TT--TTTG--GCCTGGTCTTTCTTTTCTGGAGATGCT--TTTGCTGCCAGCGGCTAATAAAAATTTGAGTGGTTAAGTTTACCAAGTAAGACTTACAGACTGCTTTCATT----------------TA----------------GGTCACATTT-AAACACACTGACCCGGAGCCCCCTG-GTTGGAAA-----------------------------------------------------------------------------------ATCTG----------CATTAATCTACATGGGTAGCAGGTATCTGAAACTATAGATGCTCAAGCCGTGAGAAAGGA---- i mm10.chr11 C 0 C 0 s canFam3.chr9 21455495 350 + 61074082 AGGAG---AAAGTTTCAGCAAGCACGGTC---CACGCTACAGCTTGCATTTGCTCATGTTATCATTTCATTTCACCTCCGCAAA---------ACCTCCT------------------CTCCGGCTTTTCTTTC------ATTT--GATGTTGCCCAGTC-----TTTAAAAAGACTTC--TCTGATGTCAATTGCCAATAAAACTGTGAGTGGTTAAACATCATGAATAAAACTCTCAGAATGCTTTCATTCCTTTCAATATACCCCCA-CATAGATTTCCTTCAGATCACATTT-GAACATGATGACCTTGGCCTCTCTAAATTAGTGG-----------------------------------------------------------------------------------GTCCG----------CCGTGGTCTGAAAGGGTGGTTGGTATCTGCATTTATCGATTCTCAAGTTGGAAGGGAGAAAGAA i canFam3.chr9 C 0 I 4 s dasNov3.JH570468 458547 445 - 852752 AGGATGGAGGCCCTTCTGCAATAATGGTC---CACACTATAGCTGGCATTTCCTTATGTTGTCAATTCATTTCATTTTAGCAACAACTTCAACAACTTCT------------------TTCTAGTTTTTCTTTG--------TTTAGATGCTGCCTGTTC-----TTTAAGAAGAATCC--TTTCCTGTCAACTACTAATGAAAATGTAAC----TAAACATAATAAATATGACTTTCAGAGCTCGTT-ATTCTTTTCAATACATCCCTA-CGTGGATTTCTGTCAGGTCATATTTGGAACACAATGACTTTGGGCTTTCTAAGTCAGTGGCCACCCACTTTTCTCTGCCCCAGTGCTGTCTTGGGAAATAACACTCAGTCGTCTTTAGAATACAGTGTTTTCCACCAGGGGTCGTCAGAGAGTATGCTCATTGGTCTGCTTGGGCATCTGGTGTCTAGAATTATA----CTCAAACTGGAAGGGACTGAG-- i dasNov3.JH570468 C 0 C 0 a score=377753.000000 s hg38.chr17_JH159148v1_alt 5818 30 + 88070 CAAACAGTTCACTGGCTTCCAAAATTTTCA s panTro5.chr17 16328003 30 + 83181570 CAAACAGTTCACTGGCTTCCAAAATTTTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16232888 30 + 83442489 CAAACAGTTCACTGGCTTCCAAAATTTTCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068458 30 + 4267968 CAAACAGTTCACTGGCTTCCAAAATTTTCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048317 30 - 2193130 CAAACAGTTCACTGGCTTCCAAAATTTTCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122351 30 - 77216781 CGAACAGTTCACTGGCTTCCAAAATTTTCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28035211 30 - 80997621 CGAACAGTTCACTGGCTTCCAAAATTTTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2091806 30 + 10377808 CGAACAGTTCACTGGCTTCCAAAATTTTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1977226 30 - 8458610 CGAACAGTTCACTGGCTTCCAAAATTTTCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64921497 30 + 75148670 CAAACAGTTCACTGGCTTCCAAAATTTTCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2161527 30 + 4244037 CGAACAGTTCACTGGCTTCCAAAATTTTCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2184532 30 + 4569836 CGAACAGTTCACTGGCTTCCAAAATTTTTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46140661 29 - 159171411 CAAACAGTTCACTGGCTTCTGAAA-TTTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1850020 30 + 3513951 CAAACAGTTCACTGGCTTCAGAAATTTTCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1901148 30 + 1920343 CAAACAGTTCACTGGCTTCCGAAATTTTCA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7015061 30 - 7032639 CAAACAGTTCACTGGCTTCCGAAATTTTCA i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22105096 30 - 122082543 CAAGTAGCTTGCTTATTTTTAACCTTCTTA i mm10.chr11 C 0 C 0 s canFam3.chr9 21455849 30 + 61074082 CAAACAATCCCCTGGCTTCCAATTTTTATA i canFam3.chr9 I 4 C 0 s dasNov3.JH570468 458992 28 - 852752 --AACAGTTCACTGGCTtctagacttccca i dasNov3.JH570468 C 0 I 1557 e otoGar3.GL873537 22842526 1560 + 28711273 I a score=1234315.000000 s hg38.chr17_JH159148v1_alt 5848 110 + 88070 CCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCATTTTCCCTATAGTGAGTAGA--C--AGGAAGCCAACAACAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG s panTro5.chr17 16328033 110 + 83181570 CCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCATTTTCCCTATAGTGAGTAGA--C--AGGAAGCCAACAACAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16232918 110 + 83442489 CCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCATTTTCCCTATAGTGAGTAGA--C--AGGAAGCCAACAACAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068488 110 + 4267968 CCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCATTTTCCCTATAGTGAGTAGA--C--AGGAAGCCAACAACAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048347 110 - 2193130 CCACCAAGAGTCCTTTTGAGCTGAGTGGGCTCACTTTCCCCATAGTGAGTAGA--C--AGGAAGCTAACAACAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122381 110 - 77216781 GCACCAAGGATTCTTTTGAGCTGAGTGGGCTCACTTTCCCCACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28035241 110 - 80997621 GCACCAAGGATTCTTTTGAGCTGAGTGGGCTCACTTTCCCCACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2091836 110 + 10377808 GCACCAAGGATTCTTTTGAGCTGAGTGGGCTCACTTTCCCCACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1977256 110 - 8458610 GCACCAAGGATTCTTTTGAGCTGAGTGGGCTCACTTTCCCCACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64921527 110 + 75148670 GCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCACTTTCCCTACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGTTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2161557 110 + 4244037 GCACCAAGGATTCTTTTGAGCTGAGTAGGCTCACTTTCCCCACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAATATGAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2184562 110 + 4569836 GCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCACTTTCCCCACAGTGAGTAGA--C--AGGAAGTCAACAGCAAAAATGGTTCTGGAAAGCCACAGATGAAAACAAACATGAGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46140690 110 - 159171411 CCACCAAGTGTTCTTTTGAGCTAAGTGGGCTCAGTCTCCCCATAGTGAGTAGA--C--AGGAAGCCAATAACAAAAATGGTTTTGGGAAGCCACAGACAAAAGCAAGCATGAAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1850050 110 + 3513951 CCACCAAGAGTTCTTTTGAGCTGCGTGGGTGCAGTTTCTCCGTAATGAGTAGA--C--AGAAAGCCAACAACAAAAATGGTTTTGGAAAGCCACAGACAAAAGCAAGCATGAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1901178 110 + 1920343 CCACCAAGAGTTCTTTGGAGCTGAGTGGGCTCAGTCTCCCCATAATAAGTAGA--C--AGAAAGCCAACAACAAAAATGGTTTTGGAAAGCCACAGACAAAAACAGGCATGAAG i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7015091 110 - 7032639 CCACCAAGAGTTCTTTTGAGCTGAGTGGGCTCAGTCTCCCCATAGTGAGTAGA--C--AGGAAGTCAACAACAAAAATGGTTTTGGAAAGCCACAGACAAAAACAAGCGTGAAG i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22105126 112 - 122082543 TCACCAAGAGCTCTTTGGAACTGAGTGGCCTTAGTTTCCTCATGATGAGTGGATTT--GAAAAACCCGAAACAGAGATAATTCAGGAGAGCTATAGATGATTATAAACCTATGG i mm10.chr11 C 0 I 5401 s canFam3.chr9 21455879 110 + 61074082 CCATCAAAAGCT-TTTTGAATTGGGTGGATTCCATCTCCCCACAGTGAACAGA--CTTGGAAAGCCAAAGACAGAAATGGTCTAGGGAAGCCACAGACTAAAATAAACAAAGG- i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I a score=339393.000000 s hg38.chr17_JH159148v1_alt 5958 32 + 88070 TATTGGCCATAGAGAATAGCTTAGGGTTAATT s panTro5.chr17 16328143 32 + 83181570 TATTGGCCATAGAGAAAAGCTTAGGGTTAATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233028 32 + 83442489 TATTGGCCATAGAGAATAGCTTAGGGTTAATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068598 32 + 4267968 TATTGGCCATAGAGAATAGCTTAGGGTTAATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048457 32 - 2193130 TATTGGCCATGGAGAATAGCTTAGGGTTAATT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122491 32 - 77216781 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28035351 32 - 80997621 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2091946 32 + 10377808 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1977366 32 - 8458610 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64921637 32 + 75148670 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i chlSab2.chr16 C 0 I 2570 s manLeu1.NW_012106252v1 2161667 32 + 4244037 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2184672 32 + 4569836 TATTGGCCATGGAGAATTGCTTAGGGTTAATT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46140800 32 - 159171411 TGTTGGCCATGGAGAATCACTTAGGGTTAATT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1850160 32 + 3513951 TGTCAGCCATGGAGAATCGCTTAGGGTTAATT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1901288 32 + 1920343 TGTCGGCCATGGAGAATTGCTTAGGGTTAATT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7015201 32 - 7032639 TGTCGGCCATGGAGAAGCGCTTAGGGTTAATT i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 21455989 31 + 61074082 -TTTGACCATCAATAATAGCTAAGGGTTTATG i canFam3.chr9 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I a score=1707.000000 s hg38.chr17_JH159148v1_alt 5990 2 + 88070 CA- s panTro5.chr17 16328175 2 + 83181570 CA- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233060 2 + 83442489 CA- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068630 2 + 4267968 CA- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048489 2 - 2193130 CA- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s colAng1.NW_012122154v1 2184704 2 + 4569836 CA- i colAng1.NW_012122154v1 C 0 I 2540 s calJac3.chr5 46140832 2 - 159171411 TA- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1850192 2 + 3513951 TA- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1901320 2 + 1920343 TA- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7015233 2 - 7032639 TA- i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 21456020 2 + 61074082 -AA i canFam3.chr9 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e manLeu1.NW_012106252v1 2161699 0 + 4244037 C e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e chlSab2.chr16 64921669 2570 + 75148670 I e cerAty1.NW_012006043v1 1977398 0 - 8458610 C e macNem1.NW_012014910v1 2091978 0 + 10377808 C e macFas5.chr16 28035383 0 - 80997621 C e rheMac8.chr16 30122523 0 - 77216781 C a score=-12992.000000 s hg38.chr17_JH159148v1_alt 5992 15 + 88070 TTTAA----GAttcttttt- s panTro5.chr17 16328177 10 + 83181570 TTTAA----GAttc------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233062 10 + 83442489 TTTAA----GAttc------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068632 11 + 4267968 TTTAA----GAttc----t- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048491 8 - 2193130 TTTAA----GAt-------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122523 9 - 77216781 --CAA---tttttt------ i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28035383 6 - 80997621 --CAA------ttt------ i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2091978 5 + 10377808 --CAA-------tt------ i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1977398 5 - 8458610 --CAA-------tt------ i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2161699 5 + 4244037 --CAA-------tt------ i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5 46140834 10 - 159171411 CCTAA----GGTTC------ i calJac3.chr5 C 0 I 1636 s saiBol1.JH378271 1850194 10 + 3513951 CTTAA----GATTC------ i saiBol1.JH378271 C 0 I 1611 s cebCap1.NW_016107730v1 1901322 10 + 1920343 CTTAA----GATTC------ i cebCap1.NW_016107730v1 C 0 I 5 s aotNan1.NW_018502359v1 7015235 10 - 7032639 CTTAA----GATTC------ i aotNan1.NW_018502359v1 C 0 I 1646 s canFam3.chr9 21456022 15 + 61074082 CTTAACACTGtttt-----t i canFam3.chr9 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e colAng1.NW_012122154v1 2184706 2540 + 4569836 I e chlSab2.chr16 64921669 2570 + 75148670 I a score=546.000000 s hg38.chr17_JH159148v1_alt 6007 1 + 88070 t s gorGor5.CYUI01015385v1 4068643 1 + 4267968 t i gorGor5.CYUI01015385v1 C 0 C 0 s cebCap1.NW_016107730v1 1901337 1 + 1920343 T i cebCap1.NW_016107730v1 I 5 I 1630 s canFam3.chr9 21456037 1 + 61074082 t i canFam3.chr9 C 0 I 3 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7015245 1646 - 7032639 I e manLeu1.NW_012106252v1 2161704 0 + 4244037 C e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1850204 1611 + 3513951 I e calJac3.chr5 46140844 1636 - 159171411 I e colAng1.NW_012122154v1 2184706 2540 + 4569836 I e chlSab2.chr16 64921669 2570 + 75148670 I e cerAty1.NW_012006043v1 1977403 0 - 8458610 C e macNem1.NW_012014910v1 2091983 0 + 10377808 C e macFas5.chr16 28035389 0 - 80997621 C e rheMac8.chr16 30122532 0 - 77216781 C e nomLeu3.chrUn_GL397460_1 2048499 0 - 2193130 C e panPan2.chr17 16233072 0 + 83442489 C e panTro5.chr17 16328187 0 + 83181570 C a score=71775.000000 s hg38.chr17_JH159148v1_alt 6008 25 + 88070 ttttttttttttttttgacacagag s panTro5.chr17 16328187 22 + 83181570 ---tttttttttttttgacacagag i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233072 22 + 83442489 ---ttttttttttttgtacacagag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068644 25 + 4267968 ttttttttttttttttgacacagag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048499 22 - 2193130 ---tttttttttttttgatacggag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122532 22 - 77216781 ---tttttttttttttgagatgggt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28035389 22 - 80997621 ---tttttttttttttgagatgggt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2091983 22 + 10377808 ---tttttttttttttgagatgggt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1977403 22 - 8458610 ---tttttttttttttgagatgggt i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2161704 22 + 4244037 ---tttttttttttttgaggtgggt i manLeu1.NW_012106252v1 C 0 C 0 s canFam3.chr9 21456041 25 + 61074082 agatttttaattttatgagagagag i canFam3.chr9 I 3 I 1456 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7015245 1646 - 7032639 I e cebCap1.NW_016107730v1 1901338 1630 + 1920343 I e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1850204 1611 + 3513951 I e calJac3.chr5 46140844 1636 - 159171411 I e colAng1.NW_012122154v1 2184706 2540 + 4569836 I e chlSab2.chr16 64921669 2570 + 75148670 I a score=332392.000000 s hg38.chr17_JH159148v1_alt 6033 90 + 88070 tttcactcttgttgcccaggctggagtgcaagagcgtgatctcggcccaccgcaacctctgcctcctgggttcaagcgattctcctgcct s panTro5.chr17 16328209 90 + 83181570 tttcactcttgttgcccaggctggagtgcaagagcgtgatctcggcccactgcaacctctgcctcctgggttcaagcaattctcctgcct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233094 90 + 83442489 tttcactcttgttgcccaggctggagtgcaagagcgtgatctcggcccactgcaacctctgcctcctgggttcaagcaattctcctgcct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068669 90 + 4267968 tttcactcttgttgcccaggctggagtgcaagagcgtgatctcggcccaccgcaacatctgcctcctgggttcaagcgattctcctgcct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048521 90 - 2193130 tttcactcttgctgcccaggctggagtgcaagagcgtgatctccggccaccacaacctctgcctcctgggttcaagcgattctcctgcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30122554 90 - 77216781 ttttgctcttattgcccaggctggagtgcaatggcatgatctcagctcactgcaacctccacctcccagattcaagcaattctcctgcct i rheMac8.chr16 C 0 I 2429 s macFas5.chr16 28035411 90 - 80997621 ttttgctcttattgcccaggctggagtgcaatggcatgatctcagctcactgcaacctccacctcccagattcaagcaattctcctgcct i macFas5.chr16 C 0 I 2426 s macNem1.NW_012014910v1 2092005 90 + 10377808 ttttgctcttattgcccaggctggagtgcaatggcatgatctcagctcactgcaacctccacctcccagattcaagcaattctcctgcct i macNem1.NW_012014910v1 C 0 I 2429 s cerAty1.NW_012006043v1 1977425 90 - 8458610 ttttgctcttattgcccaggctggagtgcaatggcatgatctcagctcactgcaacctccacctcccagattcaagcaattctcctgcct i cerAty1.NW_012006043v1 C 0 I 2416 s manLeu1.NW_012106252v1 2161726 90 + 4244037 ttttgctcttattgcccaggctggagtgcaatggcatgatctcagctcactgcaacctccacctcccagattcaagcaattctcctgcct i manLeu1.NW_012106252v1 C 0 I 2388 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7015245 1646 - 7032639 I e cebCap1.NW_016107730v1 1901338 1630 + 1920343 I e canFam3.chr9 21456066 1456 + 61074082 I e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1850204 1611 + 3513951 I e calJac3.chr5 46140844 1636 - 159171411 I e colAng1.NW_012122154v1 2184706 2540 + 4569836 I e chlSab2.chr16 64921669 2570 + 75148670 I a score=3000.000000 s hg38.chr17_JH159148v1_alt 6123 3 + 88070 GGG s panTro5.chr17 16328299 3 + 83181570 GGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233184 3 + 83442489 GGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068759 3 + 4267968 GGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048611 3 - 2193130 GGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7015245 1646 - 7032639 I e cebCap1.NW_016107730v1 1901338 1630 + 1920343 I e canFam3.chr9 21456066 1456 + 61074082 I e manLeu1.NW_012106252v1 2161816 2388 + 4244037 I e dasNov3.JH570468 459020 1557 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1850204 1611 + 3513951 I e calJac3.chr5 46140844 1636 - 159171411 I e colAng1.NW_012122154v1 2184706 2540 + 4569836 I e chlSab2.chr16 64921669 2570 + 75148670 I e cerAty1.NW_012006043v1 1977515 2416 - 8458610 I e macNem1.NW_012014910v1 2092095 2429 + 10377808 I e macFas5.chr16 28035501 2426 - 80997621 I e rheMac8.chr16 30122644 2429 - 77216781 I a score=121230.000000 s hg38.chr17_JH159148v1_alt 6126 11 + 88070 acattgtgtca s panTro5.chr17 16328302 11 + 83181570 acattgtgtca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233187 11 + 83442489 acattgtgtca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068762 11 + 4267968 acattgtgaca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048614 11 - 2193130 acattgtgtca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125073 11 - 77216781 acattgtgtca i rheMac8.chr16 I 2429 C 0 s macFas5.chr16 28037927 11 - 80997621 acattgtgtca i macFas5.chr16 I 2426 C 0 s macNem1.NW_012014910v1 2094524 11 + 10377808 acattgtgtca i macNem1.NW_012014910v1 I 2429 C 0 s cerAty1.NW_012006043v1 1979931 11 - 8458610 acattgtgtca i cerAty1.NW_012006043v1 I 2416 C 0 s chlSab2.chr16 64924239 11 + 75148670 acattgtgtca i chlSab2.chr16 I 2570 C 0 s manLeu1.NW_012106252v1 2164204 11 + 4244037 acattgtgtca i manLeu1.NW_012106252v1 I 2388 C 0 s colAng1.NW_012122154v1 2187246 11 + 4569836 acattgtgtca i colAng1.NW_012122154v1 I 2540 C 0 s calJac3.chr5 46142480 11 - 159171411 acattgtgtca i calJac3.chr5 I 1636 C 0 s saiBol1.JH378271 1851815 11 + 3513951 acattgtgtca i saiBol1.JH378271 I 1611 C 0 s cebCap1.NW_016107730v1 1902968 11 + 1920343 acattgtgtca i cebCap1.NW_016107730v1 I 1630 C 0 s dasNov3.JH570468 460577 11 - 852752 acattgtgtca i dasNov3.JH570468 I 1557 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7015245 1646 - 7032639 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I a score=2153957.000000 s hg38.chr17_JH159148v1_alt 6137 220 + 88070 gctggctaaggagaaatattcataggatccctttgtattatcatagagcaggcaatgaag-ggtgtacctgtaggtgagcagcaataatttggtaactagcaAACAAATCTTCATAGTTCACA------TTTTTCTGTCACTGAGGTATACTTTGGATCTGTAGAGAGACTATTAATTGTTTTATCCCCAGTTTTAGAATCACAAGGGTCGTAGTCTTGAAAGAAGG s panTro5.chr17 16328313 220 + 83181570 gctggctaaggagaaatattcataggatcactttgtattatcatagagcaggcaatgaag-ggtgtacctgtaggtgagcagcaataatttggtaactagcacaCAAATCTTCATAGTTCACA------TTTTTCTGTCACTGAGGTATACTTTGGATCTGTAGAGAGACTATTAATTGTTTTATCCCCAGTTTTAGAATCACAAGGGTCGTAGTCTTGAAAGAAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233198 220 + 83442489 gctggctaaggagaaatattcataggatcactttgtattatcatagagcaggcaatgaag-ggtgtacctgtaggtgagcagcaataatttggtaactagcacaCAAATCTTCATAGTTCACA------TTTTTCTGTCACTGAGGTATACTTTGGATCTGTAGAGAGACTATTAATTGTTTTATCCCCAGTTTTAGAATCACAAGGGTCGTAGTCTTGAAAGAAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4068773 220 + 4267968 ggtggctaaggagaaatattcataggatccctttgtattatcacagagcaggcaatgaag-ggtgtacctgtaggtgagcagcaataatttggtaactagcacaCAAATCTTCATACTTCACA------TTTTTCTGTCACTGAGGTATACTTTGGATCTGTAGAGAGACTATTAATTGTTTTATCCCCAGTTTTAGAATCACAAGGGTCGTAGTCTTGAAAGAAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048625 220 - 2193130 gctggctaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-tatatacttgtaggtgagcagcaataatttggtaaatagcacaTACATCTTCATAGTTCACA------TTTTTCTATCACTGATGTATACTTTGGATCTGTAGAGAGATAATTATTGGTTCTATCCCCAGTTTTAGAATTACAAGTGTGGTAGTCATGAAAGAAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125084 222 - 77216781 gctggccaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-ggtgtacttgtaggtgagcagcaataatttagtaactagaacaCAAATCTTCATAGTTCACA----TTTTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCGCAAGGGTCACAGTCATGAAAGAAGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28037938 222 - 80997621 gctggccaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-ggtgtacttgtaggtgagcagcaataatttagtaactagaacaCAAATCTTCATAGTTCACA----TTTTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCGCAAGGGTCACAGTCATGAAAGAAGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2094535 223 + 10377808 gctggccaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-ggtgtacttgtaggtgagcagcaataatttagtaactagaacaCAAATCTTCATAGTTCACA---TTTTTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCGCAAGGGTCACAGTCATGAAAGAAGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1979942 220 - 8458610 gctagccaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-ggtgtacttgtaggtgagcagcaataatttagtaactaaaacaCAAATCTTCATAGTTCACA------TTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCACAAGGGTCACAGTCATGAAAGAAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64924250 226 + 75148670 gctggccaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-ggtgtacttgtaggtgagcagcaataatttagtaactagaacaCAAATCTTCATAGTTCACATTTTTTTTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCGCAAGGGTCACAGTCATGAAAGAAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2164215 222 + 4244037 gctggccaaggagaaatattcataggatccctctgtattatcatagagcaggcaatgaag-ggtgtacttgtaggtgagcagcaataatttagtaactagaacaCAAATCTTCATAGTTCACA----TTTTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCGCAAGGGTCACAGTCATGAAAGAAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2187257 225 + 4569836 gctagccaaggagaaatatttgtaggatccctctgtattattatagagcaggcaatgaag-ggtgtatttgtaggtaagcagcaataatttagtaactagaacaCAAATCTTCATAGTTGACA-TTTTTTTTTTTTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAGTGGTTCTATCCCCAGTTTCAGAATCACTAGGGTCACAGTCATGAAAGAAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46142491 220 - 159171411 gctggccaaggataaatattcataggatctctctgttttatcatagagcaggcaatgaag-ggtatacttgcaggtgagcagcaaaaaattagtaactagaacaCAGATCTTTCTAGCTCACA------TTTTTCTGTCACTGATGTATACTTTGGAGCTGCAGAGAGATTGTTAATGGTTGTATCCTCAGTTTTAGAATCACAAGGGTCATAGTAATGAAAGAAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1851826 214 + 3513951 actggccaaggataaacattcatagga--tccctgttttatcatagagcaggcaatgaag-----cccttgcaggtgagcagcaaaaatttagtaactagaacaCAGATCTTTATAGCTCACA------TTTTTCTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAATGGTTGTGTCCTCAGTTGTAGAATCACAAGGATCATAGTCATGAAAGAAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1902979 216 + 1920343 gctggccaaggataaacattcataggatccctctgttttatcatagagcaggcaatgaag-ggtatactt----gtgagcagcaaaaatgtagtagctagAAAACAGATCTTTATAGCTCACA------TTTTTCTGTCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAATGGTTGTATCCTCAGTTTTAGAATCACAAGGGTCATAGTCATGAAAGAAGG i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7016891 220 - 7032639 gctggccaaggataaacattcataggatccctctgttttatcatagagcaggcaatgaag-ggcgtacttgcaggtgagcagcaaaaatttagtaactagaacaCAGACCTTTATAGCTCACA------TTTTTCTATCACTGATGTATACTTTGGAGCTGTAGAGAGATTATTAATGGTTGTATCCCCAGTTTTAGAATCACAAGGGTCATAGTCATGAAAGAAGA i aotNan1.NW_018502359v1 I 1646 C 0 s dasNov3.JH570468 460588 151 - 852752 gctggaaaagggaaaatatatatagggtccttctctattatcctagagcaggcaatgaaggggggtatttggaaaagagagacaataaattg---------------atCTGCTTA-------------TTTTTCTGTCAGTGATGTGTACTTTGTAGCTTTAG------------------------------------------------GACCATGACAGAAGG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I a score=846077.000000 s hg38.chr17_JH159148v1_alt 6357 114 + 88070 TTCTGGGTC-AAAAAAGAGGGGGATGGCCATAAG-----AACAAAATCTAGCACCTGAACATGGAAGGGTCCAGGTGGAGAATTTCTACCTGCAGTTGAATTGACTAATGTCAGCACTGA s gorGor5.CYUI01015385v1 4068993 114 + 4267968 TTCTGGGTC-AAAAAAGAGGGGGATGGCCATAAG-----AACAAAATCTAGCACCTGAACATGGAAGGGTCTAGGTGGAAAATTTCTACCTGCAGTTGAATTGACTAATGTCAGCACTGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048845 115 - 2193130 TTCTGGGTCAAAAAAAGAGGGGGATGGCCATAAG-----AACAAAATCTAGCACCCGAACATGGAAGGATGTAGGTGGAGAATTTCTACCTGCAGTTGAATTGACTAATGTCAGCATTGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125306 114 - 77216781 TTCTGGGTC-AAAAAAGAGGGAGATGGCCATAAG-----AACAAAATCTAGCATCTGAACATGGAAATGTCTAGCTGGAGAATTTCTACCCATAGTTGAATTGACTAATGTCAGCATTGG i rheMac8.chr16 C 0 I 6 s macFas5.chr16 28038160 114 - 80997621 TTCTGGGTC-AAAAAAGAGGGAGATGGCCATAAG-----AACAAAATCTAGCATCTGAACATGGAAATGTCTAGCTGGAGAATTTCTACCCATAGTTGAATTGACTAATGTCAGCATTGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2094758 114 + 10377808 TTCTGGGTC-AAAAAAGAGGGGGATGGCCATAAG-----AACAAAATCTAGCATCTGAACATGGAAATGTCTAGCTGGAGAATTTCTACCCATAGTTGAATTGACTAATGTCAGCATTGG i macNem1.NW_012014910v1 C 0 I 6 s cerAty1.NW_012006043v1 1980162 105 - 8458610 TTCTGGGTC-AAAAAAAGGGGGGATGGCCATAAG-----AACAAAATCTAGCATCT---------AGTGTCTAGGTGGAAAATTTCTACCCATAGTTGAATTGACTAATGTCAGCATTGG i cerAty1.NW_012006043v1 C 0 I 6 s chlSab2.chr16 64924476 114 + 75148670 TTCTGGGTC-AAAAAAGAGGGGGATGGCCACAAG-----AACAAAATCTAGCATCTGAACATGGAAATGTCTAGCTGGAGAATTTCTACCCATAGTTGAATTGACTAATGTCAGCATTGG i chlSab2.chr16 C 0 I 6 s manLeu1.NW_012106252v1 2164437 105 + 4244037 TTCCGGGTC-AAAAAAAGGGGGGATGGCCATAAA-----AACAAAATCTAGCATCT---------AGTGTCTAGGTGGAAAATTTCTACCCATAGTTGAATTGACTAATGTCAGCATTGG i manLeu1.NW_012106252v1 C 0 I 6 s colAng1.NW_012122154v1 2187482 114 + 4569836 TTCTGGGTC-AAAAAAGAGGGGGATGGCCATAAG-----AACAAAATCTAGCATCTGAACATGAAAGTGTCTAGGTGGAGAATTTCTACCCATAGTTGAATTTACTAATGTCAGCATTGG i colAng1.NW_012122154v1 C 0 I 6 s calJac3.chr5 46142711 114 - 159171411 TTCTGAGGC-AAAAAAGAGTGGGATGGCCATAAG-----AACAAAATCTAGCACCTGAACATGGCAAGGTCTACGTGGAGAATTTCTATCAGGAGTTGAATTGACTAATGTCAGTATTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1852040 114 + 3513951 TTCTGGGGT-AAAAAAGAGTGGGATGGCCATAAG-----AACAAAATCTAACACCTGAACATGGAAAGGTCTAGGCGGAGAATTTCTGTCAGTAGTCGAATTGACTAATGTCAACATTGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1903195 119 + 1920343 TTTGGGGGC-AAAAAAGAGTGGAATGGCCATAAGAACAAAACAAAATCTAACACCTGAACACGGAAAGGTCTAGATGGAGAATTTCTATCAGCAGTTGAATTGACTAATGCCAGCATTGG i cebCap1.NW_016107730v1 C 0 I 6 s aotNan1.NW_018502359v1 7017111 114 - 7032639 TTCTGGGGC-AAAAAAGAGTGGGATGGCCATAAG-----AATAAAATCTAGCACCTGAACATGGAAAGGTCTAGGTGGAGAATTTCTATCAGTAGTTGAATTGACTAATGTCAGCATTGG i aotNan1.NW_018502359v1 C 0 I 6 s dasNov3.JH570468 460739 113 - 852752 -GCTTAGTT-AAGAGAGAATAGGGTGGCAGTGAA-----AGAAAAATTTAGGGCCCGAACAAGGAAGTGGCTAGATGGAGGATTGCTACCAGTAGTTGAATTAATTCATGTTGGAATTAT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=389.000000 s hg38.chr17_JH159148v1_alt 6471 34 + 88070 ATCTCTTCTTGAATTGAATTCAAGAAGCATTGAA s gorGor5.CYUI01015385v1 4069107 34 + 4267968 ATCTCTTCTTGAATTGAATTCAAGAAGCATTGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048960 34 - 2193130 ATCTCTTCTTGAATTGAATTCAAGAAGCACTGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28038274 6 - 80997621 ---------------TAATTC------------- i macFas5.chr16 C 0 C 0 s calJac3.chr5 46142825 6 - 159171411 ---------------TAATTC------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1852154 6 + 3513951 ---------------TAATTC------------- i saiBol1.JH378271 C 0 C 0 s dasNov3.JH570468 460852 7 - 852752 --------------ATAATTC------------- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7017225 6 - 7032639 I e cebCap1.NW_016107730v1 1903314 6 + 1920343 I e canFam3.chr9 21456066 1456 + 61074082 I e manLeu1.NW_012106252v1 2164542 6 + 4244037 I e otoGar3.GL873537 22842526 1560 + 28711273 I e colAng1.NW_012122154v1 2187596 6 + 4569836 I e chlSab2.chr16 64924590 6 + 75148670 I e cerAty1.NW_012006043v1 1980267 6 - 8458610 I e macNem1.NW_012014910v1 2094872 6 + 10377808 I e rheMac8.chr16 30125420 6 - 77216781 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=954192.000000 s hg38.chr17_JH159148v1_alt 6505 117 + 88070 TGCTTCTTGAATCCCTAGATATAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTAATGGGTATTTTCCTTTTATTTCTAACTATGTATGGGTATTG s gorGor5.CYUI01015385v1 4069141 117 + 4267968 TGCTTCTTGAATCCTTAGATGTAGGTGGGCTTATCATTTCAATAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTAATGGGTATTTTCCTTTTATTTCTAACTATGTATGGGTATTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2048994 117 - 2193130 TGCTTCTTGAATACCTAGATATAGCTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATGGGTATTTTCCTTTTATTTCTAACTATGTATGGGTATTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125426 117 - 77216781 TGCTTCTTGAATCCCTAGATACAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATAGGTATTTTCCTCTTATTTCTAACTATGTATGGCTATTG i rheMac8.chr16 I 6 C 0 s macFas5.chr16 28038280 117 - 80997621 TGCTTCTTGAATCCCTAGATACAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATAGGTATTTTCCTCTTATTTCTAACTATGTATGGCTATTG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2094878 117 + 10377808 TGCTTCTTGAATCCCTAGATACAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATAGGTATTTTCCTCTTATTTCTAACTATGTATGGCTATTG i macNem1.NW_012014910v1 I 6 C 0 s cerAty1.NW_012006043v1 1980273 116 - 8458610 TGCTTCTTGAATCCCTAGATACAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATGGGTATTTTCCT-TTATTTCTAACTATGTATGGCTATTG i cerAty1.NW_012006043v1 I 6 C 0 s chlSab2.chr16 64924596 117 + 75148670 TGCTTCTTGAATCCCTAGATACAGGTGGGTTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATGGGTATTTTCCTCTTATTTCTAACTATGTATGGCTATTG i chlSab2.chr16 I 6 C 0 s manLeu1.NW_012106252v1 2164548 116 + 4244037 TGTTTCTTGAATCCCTAGATACAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTCTTCTGATGGGTATTTTCCT-TTATTTCTAACTATGTATGGCTATTG i manLeu1.NW_012106252v1 I 6 C 0 s colAng1.NW_012122154v1 2187602 116 + 4569836 TGCTTCTTGAATCCCTAGATACAGGTGGGCTTATCATTTCAACAGTTCAAGTAGCTAGATCTGTTCTAGTTTTCTGATGGGTATTTTCCT-TTATTTCTAACTATGTATGGCTATTG i colAng1.NW_012122154v1 I 6 C 0 s calJac3.chr5 46142831 117 - 159171411 TGCTTCTTGAATCCCTAGGTATATGTGGGCTTATCATTTCAACAGTTCAATTAGCTAGATCTGTTCTGGTCTTCTGATGGGTACTTTTCTCTTATTTTTAACTATGTATGGGTATTG i calJac3.chr5 C 0 I 299 s saiBol1.JH378271 1852160 117 + 3513951 TGCTTCTTGAATCCCTAGGTATAGGTGGACTTATAATTTCAACAGTTCAATTGGTTAGATCCGTTCTGGTCTCCTGATGGGTATTTTTCTCTCATTTTTAACTATGTATGGGTATTG i saiBol1.JH378271 C 0 I 302 s cebCap1.NW_016107730v1 1903320 117 + 1920343 TGCTTCTTGAATCCCTAGGTATAGGTGGACTTATCATTTCAACGGTTCAATTAGTTAGATCTGTTCTGGTCTTCTGATGGGTATTTTTCTCTTATTTTTAAGTATGTATGGGTATTG i cebCap1.NW_016107730v1 I 6 I 309 s aotNan1.NW_018502359v1 7017231 117 - 7032639 TGCTTCTCAAATCCCTAGGTATAGGTGGACTTGTCATTTCAACAGTTCAATTAGTTAGATCTGTTCTGGTCTTCTGATGGGTACTTTTCTCTTATTTTTAACTATGTATGGGTATTG i aotNan1.NW_018502359v1 I 6 C 0 s dasNov3.JH570468 460859 116 - 852752 TGCCTCCCTGTTGCCAGGATGTAGGTGGGATTATCGTTTAGCCAATCCAA-TACCTAGTTCTGATCTGGTCTTCTGATGGATAGTTTCCTCTTAATTCCAACTGTGTATGGGCATCA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=142457.000000 s hg38.chr17_JH159148v1_alt 6622 15 + 88070 CCTTCAGTACCTTTT s gorGor5.CYUI01015385v1 4069258 15 + 4267968 CCTTCAGTACCTTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2049111 15 - 2193130 CCTTCAGTACCTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125543 15 - 77216781 CCTTCAGTACCTTTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28038397 15 - 80997621 CCTTCAGTACCTTTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2094995 15 + 10377808 CCTTCAGTACCTTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1980389 15 - 8458610 CCTTCAGTACCTTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64924713 15 + 75148670 CCTTCAGTACCTTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2164664 15 + 4244037 CCTTCAGTACCTTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2187718 15 + 4569836 CCTTCAGTACCTTTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46143247 15 - 159171411 CCTTCAGTACCTTTT i calJac3.chr5 I 299 C 0 s saiBol1.JH378271 1852579 15 + 3513951 CCTTCAGTACCTTTT i saiBol1.JH378271 I 302 C 0 s cebCap1.NW_016107730v1 1903746 15 + 1920343 CCTTCAGTACCTTTT i cebCap1.NW_016107730v1 I 309 C 0 s aotNan1.NW_018502359v1 7017348 15 - 7032639 CCTTCAGTACCTTtt i aotNan1.NW_018502359v1 C 0 I 377 s dasNov3.JH570468 460975 15 - 852752 CCTTCAGTAATTTCT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=284632.000000 s hg38.chr17_JH159148v1_alt 6637 83 + 88070 CTacccacacacatgcacacacatatagatgcat--------------------------------------------------acaggtacac-acacacacactcagatacagatgcacacac----atacatgca s gorGor5.CYUI01015385v1 4069273 133 + 4267968 CTacccacacacatgcacacacatatagatgcatacaggtacacacacacacactcagacacacatgcacacacatacatgtacacaggtacac-acacacacactcagacacacatgcacacac----atacatgca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2049126 89 - 2193130 TTacccacacacatgcacacacacatagatgcat------------------------------------------------acacatacactc-acacacacactcagacacacatgcacacacacatacatatgca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125558 73 - 77216781 CTACCCacacacatgcacacatacatacatgcat------------------------------------------------acacatgcactc-acacacacactcagacacacatgc----------------aca i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28038412 73 - 80997621 CTACCCacaaacatgcacacatacatacatgcat------------------------------------------------acacatgcactc-acacacacactcagacacacatgc----------------aca i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2095010 89 + 10377808 CTACCCacacacatgcacacatacatacatgcat------------------------------------------------acaCATGCACTc-acacacacactcagacacacatgcgcacacacacacacataca i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1980404 70 - 8458610 CTATCcacacacatgcacacatacatacatgcat------------------------------------------------acacatgcactc-acacacacactcagacacacatgt------------------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64924728 70 + 75148670 CTacccacacacatgcacacatacatacatgcat------------------------------------------------acacatgcactc-acacacacactcagacacacatgc------------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2164679 69 + 4244037 CTATCcacacacatgcacacatacatacatgcat------------------------------------------------acacatgcactc-acacacacactcagacacacatg-------------------- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2187733 66 + 4569836 GTacccacacacacacacacatacatacatgcat------------------------------------------------acacataaact-----cacacactcagacacacatgc------------------- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46143262 74 - 159171411 CTACCcacacacatgcacaaacacatatatgcat------------------------------------------------acacatacagtt----cacacacacagacacacatgtacacaa--a---------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1852594 80 + 3513951 CTACTcacacacatgcacaaacacatacgtgcat------------------------------------------------acacatacacttcacacacacacacagacacacatgcacacaaaca---------- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1903761 73 + 1920343 CTactcacacacatgcacaaacacatacatgcat------------------------------------------------acacatacactt----cacatacacagacacacatgcacacaa------------- i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 460990 13 - 852752 TTCCCCCCTCTCC----------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7017363 377 - 7032639 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=3315393.000000 s hg38.chr17_JH159148v1_alt 6720 456 + 88070 cacacacactcacacacagacacacaccacaTTTCAACTTAGTTGTAT-GGCTGCACTTAAGGTTGATTTATTTGCTCCATGATTTA--------------CAATTGCCTATAAAACATGCCTAGCCAAACCTGAGTAAAGTGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCCCCATCTAACTGGCCCAGCTGATATCACCCTCTTGTTCCCCCCTGCCCTTTGGATGACTCCTGTCCCAGTTTAAATGGTTGGACTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTTCTCCCAGATCGGG--------CCTTCTCCCCAACCCGAGGAGGGACCTTAGGATCTGCTCATAAACTTACCTGATGGTCACTGGCTGAGCATCTCTCGTTCCAGTCCTCT----------CAATCACTGTGATTTGAGGTTCTCAGTAGTTAAATAGGTCTTGCCAATATGTGTGGGACATTCTAAAAAAA s gorGor5.CYUI01015385v1 4069406 456 + 4267968 cacacacactcacacacagacacacaccacaTTTCAACTTAGTTGTAT-GGCTGCACTTAAGGTTGATTTATTTGCTCCATAATTTA--------------CAATTGCCTATAAAACATGCCTAGCCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCCCCATCTAACTGGCCCAGCTGATATCACCCTCTTGTTCCCCCCTGCCCTTTGGATGACTCCTGTCCCAGTTTAAATGGTTGGGCTTCTGTCCTTAT--------------GTGTTTATGACCAGTGCCCTGACTTTCTCCCAGATCGGG--------CCTTCTCCCCAACCCGAGGAGGGACCTTAGGATCTGCTCATAAACTTACCTGATGGTCACTGGCTGAGCATCTCTCGTTCCAGTCCTCT----------CAATCACTGTGATTTGAGGTTCTCAGTAGTTAAATAGGTCTTGCCAATATGTGTGGGACATTCTAAAAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2049215 445 - 2193130 cacacacactcacacacagacacacaccacaTTTCAACTTAGTTGTAT-GGCTGCACTTAAGGTTGATTTATTTGCTCCATAATTTA--------------CAATTGCCTATAAAACATGCTTAGGCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGGCTTCCCCATCTAACTGGTCCAGCTGATATCACCCTCTTCTTCCCCCTTGCCCTTTGGATGACTCCTGTCCCAATTTAAATGGTTGGGCTTC------TAT--------------GTCTTTATGACCAGGGCCCTGACTTTCTCCCAGATCAGG--------CCTTCTCCCTTAT-----AAGGGACCTTAGGATCTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTCTTGTTCCAGTCCTCC----------CAATCACTGTGATTTGAGGTTCTCAGTAGTTAAATAGGTCTTGCCAATATGTGTGGGACATTCTTAAAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30125631 454 - 77216781 cacacacacacatacacacacacacaccacaTTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------CAATGGCCTATAAAACATGCCTAGCCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCGCCATCTAACTGGCCCAGCTGATATCACCCCCTTCTG-CCCCCTGTCTTTTGGATGACTCCTGTCCCAGTTTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTTCTCCTAGATCGGG--------CCTTCTCCCCAGCCTGAGGAGGGACCTTAGGATTTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTGTTGTTTCAATCCTCT----------CAATCACCGTGGTTTGTGGTTCTCAGTAGTTAAATAGGTCTTGCCAGTATGTGTGGGACATTCTAAAAAAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28038485 454 - 80997621 cacacacacacatacacacacacacaccacaTTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------CAATGGCCTATAAAACATGCCTAGCCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCGCCATCTAACTGGCCCAGCTGATATCACCCCCCTCTG-CCCCCTGTCTTTTGGATGACTCCTGTCCCAGTTTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTTCTCCTAGATCGGG--------CCTTCTCCCCAGCCTGAGGAGGGACCTTAGGATTTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTGTTGTTTCAATCCTCT----------CAATCACCGTGGTTTGTGGTTCTCAGTAGTTAAATAGGTCTTGCCAGTATGTGTGGGACATTCTAAAAAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2095099 454 + 10377808 cacacacacacatacacacacacacaccacaTTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------CAATGGCCTATAAACCATGCCTAGCCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCCCCATCTAACTGGCCCAGCTGATATCACCCCCTTCTG-CCCCCTGTCTTTTGGATGACTCCTGTCCCAGTTTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTTCTCCTAGATCGGG--------CCTTCTCCCCAGCCTGAGGAGGGACCTTAGGATTTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTGTTGTTTCAATCCTCT----------CAATCACCGTGGTTTGTGGTTCTCAGTAGTTAAATAGGTCTTGCCAGTATGTGTGGGACATTCTAAAAAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1980474 444 - 8458610 -----------gcacacacacacacaccacaTTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------CAATTGCCTACAAAACATGCCTAGCCAAACCTGAGCAAAGAGC-ACTAAAAGATTGATTTTAGCATTTCAGCCTTCCCCATCTAACTGGCCCAGCTGATGTCATCCCCTTCTGTCCCCCTGCCTTTTGGATGACTCCTGTCCCAGTTTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTTCTCCTAGATCAGG--------CCTTCTCCCCAGCCTGAGGAGGGACCTTAGGATCTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTCTTGTTTCAACCCTCT----------CAATCACTGTGGTTTGTGGTTCTCAGTAGTTAAATAGGTCTTGCCAGTATGTGTGGGACATTCTAAAAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64924798 452 + 75148670 ---gtgcacgcgcacacacacacacaccacaTTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------CAATGGCCTATAAAACATGCCTAGCCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCCCCATCTAACTGGCCCAGCTGATATCACCCCCTTCTGCCCCCCTGTCTTTTGGATGACTCCTGTCCCAGTGTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTTCTCCTAGATTGGG--------CCTTCTCCCCAGCCTGAGGAGGGACCTTAGGATTTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTGTTGTTTCAATCCTCT----------CAATCACTGTGGTTTGTGGTTCTCATTAGTTAAATAGGTCTTGCCAGTATGTGTGGGACATTCTAAAAAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2164748 446 + 4244037 --------cacatacacacacacacaccacaTTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------CAATTGCCTATAAAACATGCCTAGCCAAACCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCCCCATCTAACTGGCCCAGCTGATATCACCCCCTTCTGTCCCCCTGCCTTTTGGATGACTCCTGTCCCAGTTTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGCCCTGACTTT-TCCTAGATCAGG--------CCTTCTTCCCAGCCTGAGGAGGGACCTTAGGATCTGCTCATAAACTTACCTGATGCTCACTGGCTGAGCATCTCTTGTTTCAACCCTCT----------CAATCACTGTGGTTTGTGGTTCTCAGTAGTTAAATAGGTCTTGCCAGTATGTGTGGGACATTCTAAAAAAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2187799 444 + 4569836 -----------acacatgcacacacacCATATTTCAATTTAGTTATAT-GGCTGCACTTAA-GTTGATTTGTTTGCTCCATAATTTA--------------TAATTGCCTATAAAACATGCCTAGCCAAATCTGAGTAAAGAGC-ACTAAAAGACTGATTTTAGCATTTTAGCCTTCCCCATCTAACTGGCCCAGCTGATATCACCCCCTTTTGCCCCCCTGCCTTTTGGATGACTCCTGTCCCAGTTTAAATGATTGGGCTTCTGTCCTTAT--------------GTCTTTATGACCAGTGACCTGACTTCCTCCTAGATTGGG--------ACTTCTCCCCAGCCTGAGGAGGGACTTTAGGATCTGCCCACAAGCTTACCTGATGCTCACTGGCTGAGCATCTCTTGTTTCAATCCTCT----------CAATCACTGTGGTTTGTGGTTCTCAGTAGTTAAATAGGTCTGGCCAGTATGTGTGGGACATTCTAAAAAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46143336 442 - 159171411 cacacacactcgcacacagacacacacCACATTTCAACTTAATTGTAT-GGCTGTACTTAAGATTGATTTGTTTGCTCCATAATTTA--------------CAGTTGTGTATAAAACATGC----------CTGACTAAAGAGC-ACTAAAACCCTGATTTTAGCATTTTGGCCTTCAGCACTGAATTGGCCCAGCCGATATTACCC---TCTTCCCCCCTGCCCTTTGGATGACTCCTGTCCCACTTTAAATGATTAGGCTTCCGTCACTGT--------------GTCTTTAGGATCAGTGCTCTGACTTTCTCTCAGACTGGG--------CCTTCTCCCCAACCCAAGAAGAGACCTTAGGATCTGCTCATAAATTTATTCAATGCTCGCCGGCTGAGTATGCCTTGTTCCAGTCTTCT----------CAATCAATGTGGTCTGTGGTTCTCAGTAGTTTAATAGGTCTTGCCAATATATGTGGAACAGTCT-AAAAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1852674 445 + 3513951 cacacacacacacacacaaacacacatcacaTTTCAACTTAGTTGTAT-GGCGGTACTTACGGTTGATTTGTTTGCTCCATAATTTA--------------CAATTGCCTGTAAAACATGC----------CTGAGTAAAGAAC-ACTAAAAGACTGATTTTAGCATTTTGGTCTTCAGCACAGAATTGGCACAGCTGATATCACCCTCTTCTTCCCCACTGCCCTTTGGATGACACCTGTCCCACTTTAAATGATTAGGCTTCCGTCACTGT--------------GTCTTTAGGATCAGTGCTCTGACTTTCTCTCAGACTGGG--------CCTTCTTTCCAACCCAAGGAGTGACCTTAGGATCTGCTCATAAACTCACTCAAT-CTCGCTGGCTGAGTATGCCTTGTTCCAGTCTTCT----------CAATCAATGTGGTCTGTGGTTCTCAGTAGTTAAACAGGTCTTGTCAATATGTGTGGAACATTCTAAAAAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1903834 439 + 1920343 -------acacacacacagacacacacCATATTTCAACTTAGTTGTGT-GGCGGTACTTAAGATTGATTTGTTTGCCCCATAATTTA--------------CAATTGCCTATAAAACATGC----------CTGGGTAAAGAAC-ACTAAAAGACTGATTTTAGCATTTTGGTCTTCAGCACCGACTTGGCACAGCTGATATCACCCTCTTCTTCCCCCCTGCCCTTTGAATGACTCCTGTCCCACTTTAAATGATTAGGCTTCCATCACTGT--------------GTCTTTAGGATCAGTGCTCTGACTTTCTCTCAGACTGGG--------CCTTCTCCCCAACCCAAGGAGGGACCTTAGGATCTGCTCATGAACTTACTCAATGCTCGCTGGCTGAGTATGCCTTGTTCCAGTCTTCT----------CAATCAATGTGGTCTGTGGTTCTCAGTAGTTAAACAGGTCTTGCCAATATGTGTGGAACATTCTAAAAAAA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7017740 446 - 7032639 cacacacactcacacacagacacacatcacaTTTCAACTTAGTTGTAT-GGCTGTACTTAAGGTTGATTTGTTTGCTCCATAATTTA--------------CAATTGCCTATAAAACATGC----------CTGAGTAAAGAGC-TCTAAAAGACTAATTTTAGCATTTTGGTCTTTAGCACTGAATTGGCCCAGCTGATATTACCCTCTTCTTCCCCTCTGCCCTTTGGATGACTCCTGTCCCACCTTAAATGATTAGGCTTCCATCACTGT--------------GTCTTTAGGATCAGTGCTCTGACTTTCTCTCAGACTGGG--------CCTTCTCCCCAACTCAAGGAGGGACCTTAGGATCTGCTCATAAACTTACTCAATGCTCGCTGGCTGAGTATGCCTTGTTCCAGTCTTCT----------CAATCAATGTGGTCTGTGGTTCTCAGTAGTTAAACAGGTCTTGCCAATATGTGTGGAACATTCTAAAAAAA i aotNan1.NW_018502359v1 I 377 I 10 s dasNov3.JH570468 461003 443 - 852752 ----------------------CATACCACATTTAGATTTAGTTGGACAGACTGTACTCAG-GTTGATTTCTTTGTTCCATAATTTACTTTTTTTGGGAGGCAGATGCCCACAAGATGTTCCTACCAAAATATGAGTTAAGAGCAACTGAAAGTTTGATTTTTGCACTTTGGGCCTCAGAATCTAGTCAGCCCAACAATTATATCCCCTTT------------------GATGCTTCCTGCCCTAGTTTGGGTGATTGCGCCTCTGCCTTTGTCCCCTGCACCCAAAGTTCTT-----CAGATCTCTGAGTTGCTCCCAGATTAGAGTATTAGCCCTTCTCCCCAG-----GAAGTGACCCTATGATCTGCTCATAAACTTACCTGATGCTCACCTGCTGAACATCACCTGTTCCAGCCCCCTCCCTGCCCACCAGGCATTGTGATCTGT-----CCA-----CAAGTATGTCTTGCTGGAGTGTGTAGGGCATTCTAAGAAAA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=80504.000000 s hg38.chr17_JH159148v1_alt 7176 17 + 88070 ACCTTACAGATGAAGGA s gorGor5.CYUI01015385v1 4069862 17 + 4267968 ACCTTATAGATGAAGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2049660 17 - 2193130 ACCTTATAGATGAAGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30126085 17 - 77216781 CCCTTATAGATGAAGGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28038939 17 - 80997621 CCCTTATAGATGAAGGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2095553 17 + 10377808 CCCTTATAGATGAAGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1980918 17 - 8458610 TCCTTATAGATGAAGGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64925250 17 + 75148670 TCCTTATAGATGAAGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2165194 17 + 4244037 TCCTTATAGATGAAGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2188243 17 + 4569836 TCCTTATAGATGAAGGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46143778 12 - 159171411 ACTTTGTCGATG----- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1853119 12 + 3513951 ACTTTATAGATG----- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1904273 12 + 1920343 ACTTTATCGATG----- i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 461446 17 - 852752 GCATTGTGGATGAAGGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018186 10 - 7032639 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=303727.000000 s hg38.chr17_JH159148v1_alt 7193 35 + 88070 AAACTAACCAAAAGAGCCCGGGAATAATGAGACAT s gorGor5.CYUI01015385v1 4069879 35 + 4267968 AAACTAACCAAAAGAGCCCGGGAATAATGAGACTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2049677 35 - 2193130 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30126102 35 - 77216781 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28038956 35 - 80997621 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2095570 35 + 10377808 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1980935 35 - 8458610 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64925267 35 + 75148670 AAACTAACCAAAAGAGCCCTGGAATAATGGGACAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2165211 35 + 4244037 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2188260 35 + 4569836 AAACTAACCAAAAGAGCCCTGGAATAATGAGACAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46143790 35 - 159171411 AAATTAACCAAAAGAGCCCCAGAATAATGAGACAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1853131 35 + 3513951 AAATTAACCAAAAGAGCCCTGGAATAATGAGACAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1904285 35 + 1920343 AAATTAACCAAAAGAGCCCCGGAATAATGAGACAT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7018196 35 - 7032639 AAATTAACCAAAAGAGCCCCGGAATAATGAGACAT i aotNan1.NW_018502359v1 I 10 C 0 s dasNov3.JH570468 461463 35 - 852752 AAACCAACCCCAAAAGTTCGGAAGCAATGAGGCAT i dasNov3.JH570468 C 0 I 599 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=22509.000000 s hg38.chr17_JH159148v1_alt 7228 3 + 88070 CAA s gorGor5.CYUI01015385v1 4069914 3 + 4267968 CAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2049712 3 - 2193130 TAA i nomLeu3.chrUn_GL397460_1 C 0 I 616 s rheMac8.chr16 30126137 3 - 77216781 CAA i rheMac8.chr16 C 0 I 712 s macFas5.chr16 28038991 3 - 80997621 CAA i macFas5.chr16 C 0 I 711 s macNem1.NW_012014910v1 2095605 3 + 10377808 CAA i macNem1.NW_012014910v1 C 0 I 702 s cerAty1.NW_012006043v1 1980970 3 - 8458610 CAA i cerAty1.NW_012006043v1 C 0 I 705 s chlSab2.chr16 64925302 3 + 75148670 CAA i chlSab2.chr16 C 0 I 690 s manLeu1.NW_012106252v1 2165246 3 + 4244037 CAA i manLeu1.NW_012106252v1 C 0 I 708 s colAng1.NW_012122154v1 2188295 3 + 4569836 CAA i colAng1.NW_012122154v1 C 0 I 700 s calJac3.chr5 46143825 3 - 159171411 TAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1853166 3 + 3513951 CAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1904320 3 + 1920343 CAA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7018231 3 - 7032639 CAA i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e dasNov3.JH570468 461498 599 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=16497.000000 s hg38.chr17_JH159148v1_alt 7231 2 + 88070 GG s gorGor5.CYUI01015385v1 4069917 2 + 4267968 GG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050331 2 - 2193130 GG i nomLeu3.chrUn_GL397460_1 I 616 C 0 s rheMac8.chr16 30126852 2 - 77216781 GG i rheMac8.chr16 I 712 C 0 s macFas5.chr16 28039705 2 - 80997621 GG i macFas5.chr16 I 711 C 0 s macNem1.NW_012014910v1 2096310 2 + 10377808 GG i macNem1.NW_012014910v1 I 702 C 0 s cerAty1.NW_012006043v1 1981678 2 - 8458610 GG i cerAty1.NW_012006043v1 I 705 C 0 s chlSab2.chr16 64925995 2 + 75148670 GG i chlSab2.chr16 I 690 C 0 s manLeu1.NW_012106252v1 2165957 2 + 4244037 GG i manLeu1.NW_012106252v1 I 708 C 0 s colAng1.NW_012122154v1 2188998 2 + 4569836 GG i colAng1.NW_012122154v1 I 700 C 0 s calJac3.chr5 46143828 2 - 159171411 GG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1853169 2 + 3513951 GG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1904323 2 + 1920343 GG i cebCap1.NW_016107730v1 C 0 I 86 s aotNan1.NW_018502359v1 7018234 2 - 7032639 AG i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e canFam3.chr9 21456066 1456 + 61074082 I e dasNov3.JH570468 461498 599 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=17381.000000 s hg38.chr17_JH159148v1_alt 7233 2 + 88070 TC s gorGor5.CYUI01015385v1 4069919 2 + 4267968 TC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050333 2 - 2193130 TC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30126854 2 - 77216781 TC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28039707 2 - 80997621 TC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2096312 2 + 10377808 TC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1981680 2 - 8458610 TC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64925997 2 + 75148670 TC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2165959 2 + 4244037 TC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189000 2 + 4569836 TC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46143830 2 - 159171411 TC i calJac3.chr5 C 0 I 769 s saiBol1.JH378271 1853171 2 + 3513951 TC i saiBol1.JH378271 C 0 I 96 s aotNan1.NW_018502359v1 7018236 2 - 7032639 TC i aotNan1.NW_018502359v1 C 0 I 100 s dasNov3.JH570468 462097 2 - 852752 TC i dasNov3.JH570468 I 599 C 0 e mm10.chr11 22105238 5401 - 122082543 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1222968.000000 s hg38.chr17_JH159148v1_alt 7235 288 + 88070 ACTGAAGGACAAGAGTATGGGCATTTGCCTTATGACC-TGCTTGGAAATGCAACTCAGAGGAGGACTTCTATGgtggtggtgaggaaaaagcactagaccacggctcaaaggagaaggcttgagttgcatcctggccacttatttactgtatgaccttatgtaacaccagggtgctaatctataacacgaagaagttagtttattctacctctgagggctcATTTATTTACATGATCTTGTGAGTTTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT s gorGor5.CYUI01015385v1 4069921 288 + 4267968 ACTGAAGGACAAGAGTATGGGCATTTGCCTTATGACC-TGCTTGGAAATGCAACTCAGAGGAGGACTTCTATGgcggtggtgaggaaaaagcactagaccactgctcaaaggagaaggcttgagttgcatcctggccactgatttactgtatgaccttatgtaacaccagggtgctaatctataacatgaagaagttagtttattttacctctgagggctcATTTATTTACATGATCTTGTGAGTTTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050335 288 - 2193130 ACTGAGGGACAAGAGTATGGGCGTTTGCCTTATGACC-TGCTTGGAAATGCAACTCAGAGGAGGACTTCTATGgtggtggtgaggaaaaagcactagaccatggctcaaaggagaaagcctgagttgcatcctggccacttatttaccatatggccttatgtaagACCAGTGTGCTAATCTATAACACAAAGAAGTTAGTTTATTTTACCTCTGAGGGCTCATTTATTTACATGATCTTGTGAGTTTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30126856 288 - 77216781 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TACCTGCAAATGCAACTCAGAGGAGGACCTCTATGTtggtggtgaggaaaaagcactagaccatggctcaaaggagaaggactgagttgcatcctggccacttatttactgtatgaccttatgtaagaccaatgtcctaatccacaacatgaagaagttagtttatgttacctctgagggctcATTTATTTACTTGATCTTGTGAGTCTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28039709 288 - 80997621 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TACCTGCAAATGCAACTCAGAGGAGGACCTCTATGTtggtggtgaggaaaaagcactagaccatggctcaaaggagaaggactgagttgcatcctggccacttatttactgtatgaccttatgtaagACCAATGTCCTAATCCACAACATGAAGAAGTTAGTTTATGTTACCTCTGAGGGCTCATTTATTTACATGATCTTGTGAGTCTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2096314 288 + 10377808 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TACCTGCAAATGCAACTCAGAGGAGGACCTCTATGTtggtggtgaggaaaaagcactagaccatggctcaaaggagaaggactgagttgcatcctggccacttatttactgtatgaccttatgtaagaccaatgtcctaatccacaacatgaagaagttagtttatgttacctctgagggctcatttatttacatgatcttgtgagtctgtTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1981682 288 - 8458610 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TACCTACAAATGCAACTCAGAGGAGGACCTCTATGTtggtggtgaggaaaaagcactagaccatggctcaaaggagaaggacagagttgcatcctggccacttatttactgtatgaccttacgtaagACCAATGTCCTAATCCACAGCATGAAGAAGTTAGTTTATGTTACCTCTGAGGGCTCATTTATTTACATGATCTTGTGAGTCTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64925999 288 + 75148670 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TACCTGCAAATGCAACTCAGAGGAGGACCTCTATGTTGATGGTGAggaaaaagcactagaccatggctcaaaggagaaggactgagttgcatcctggccacttatttactgtatgaccttatgtaagACCAATGTCCTAATCCACAACATGAAGAAGTTAGTTTATGTTACCTCTGAGGGCTCATTTGTTTACATGATCTTGTGAGTCTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2165961 288 + 4244037 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TGCTTGGAAATGCAACCCAGAGGAGGACCTCTATGTtggtggtgaggaaaaagcactagaccatggctcaaaggagaaggactgagttgcatcctggtcacttatttactgtatgaccttatataagACCAATGTCCTAATCCACAGCATGAAGAAGTTAGTTTATTTTGCCTCTGAGGGCTCATTTATTTACATGATCTTGTGAGTCTGTTGATGTGTTCTATGAGGTTCTAAATATTCTCAAACTGATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189002 288 + 4569836 ACTGAGGGACAAGAGTATGGGTGTTTGCCTTATGACC-TACTTGCAAATGCAACTTAGAGGAGGACCTCTATGTTGGCGGTGAggaaaaagcactagaccatggctcaaaggagaaggattgagttgcatcctggccacttatttactgtatgaccttatgtaagACCAATGTCCTAATCCACAACACGACGAAGTTAGTTTATTTTACCTCTGCGGGCTCATTTATTTACATGATCTTGTGAGTCTGTTGATGTGTTCTGTGAGGTTCTAAATATTCTCAAACTGATC i colAng1.NW_012122154v1 C 0 C 0 s dasNov3.JH570468 462099 251 - 852752 ACTGAAGAACAAGGCTATGAGT-TCTGACTTATAACCTTTTTTGGAAATGCAACTCAAAGCAGGG-TTCTGTGGTGGTAATGAGG---AAGGGCAAG--------TCAAAAGAGA----CTTGATTCTCTCCTGGCCACTTATTTGTGGTgtgtctttatgtaaa---------------------atgaagaaattagactaccttacctccgaggtctcatcgacttacattatcctgtgagttcatTTGTGTTTTCTGTTAAGTTTTAGTTATTCTTCAGTTGATT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21456066 1456 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=221246.000000 s hg38.chr17_JH159148v1_alt 7523 61 + 88070 AAAACTGAAGCCTCTTGTACTTCTGGAACTGATGGGGAAGAGATTTGGAAGGATATCTTTT s gorGor5.CYUI01015385v1 4070209 61 + 4267968 AAAACTGAAGCCTCTTGTACTTCTGGAACTGATGGGGAAGAGATTTGGAAGGATATCTTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050623 61 - 2193130 AAGACTGAACCCTCTTGCACCTCTGGAACCGATGGGGAAGAGATTTGGAAGGATATCTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30127144 61 - 77216781 AAGACTAAAGCCTCTTGCAACTCTGGAACCAATGGGAAAGAGATTTGGAAGGAAAAATTTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28039997 61 - 80997621 AAGACTAAAGCCTCTTGCAACTCTGGAACCAATGGGAAAGAGATTTGGAAGGAAAAATTTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2096602 61 + 10377808 AAGACTAAAGCCTCTTGCAACTCTGGAACCAATGGGAAAGAGATTTGGAAGGAAAAATTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1981970 61 - 8458610 AAGACTAAAGCCTCTTGCAACTCTGGAACCAATGGGAAAGAGATTTGGAAGGAAAAATTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64926287 61 + 75148670 AAGACTAAAGCCTCTTGCAACTCTGGAACCGATGGGAAAGAGATTTGGAAGGAAAAATTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2166249 61 + 4244037 AAGACTAAAGCCTCTTGCAACTCTGGAACCAATGGGAAAGAGATTTGGAAGGAAAAATTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189290 61 + 4569836 AAGACTAAAGCCTCTGGCAACTCTGGAACCGATGGGAAAGAGATTTGGAAGGAAAAATTTT i colAng1.NW_012122154v1 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21456066 1456 + 61074082 I e dasNov3.JH570468 462350 0 - 852752 C e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=438851.000000 s hg38.chr17_JH159148v1_alt 7584 102 + 88070 TAGTATGCCATAAAATAAGAAATGTGATTGACTAATTT---------TGAGGTCCAAAAAGAAAATTAGAAACAAAAAGGAGGA--GGGGGAGAGAGGGAACTTGATATCACA s gorGor5.CYUI01015385v1 4070270 103 + 4267968 TAGTATGCCATAAAATAAGAAATGTGATTGACTAAATT---------TGAGGTCCAAAAAGAAAATTAGAAACAAAAAGGAGGA-GGGGGGAGAGAGGGAACTTGATATCACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050684 113 - 2193130 CagtatgccataaaataagaaatgtgattgactaaattatttgcatccgaggtccaaaaagaaaaTTAGAAACAAAAAGGGGGGAGGGGGGAGAGAGGGAACTTGGTATCACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30127205 111 - 77216781 tagtatgccataaaataagaaatgtgattgactaaattatttgcatctgaggtccaaaaagaaaaCTAGAAACAAAAA-GCGGA-GGGGGGAGAGAGGGAACTTGATATCACA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28040058 111 - 80997621 tagtatgccataaaataagaaatgtgattgactaaattatttgcatctgaggtccaaaaagaaaaCTAGAAACAAAAA-GCGGA-GGGGGGAGAGAGGGAACTTGATATCACA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2096663 111 + 10377808 tagtatgccataaaataagaaatgtgattgactaaattatttgcatctgaggtccaaaaagaaaaCTAGAAACAAAAA-GCGGA-GGGGGGAGAGAGGGAACTTGATATCACA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1982031 111 - 8458610 tattatgccataaaataagaaatgtgattgactaaattatttgcatctgaggtccaaaaagaaaaCTAGAAACAAAAA-GAGGA-GGGGGGAGAGAGGGAACTTGATATCACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64926348 112 + 75148670 tagtatgccataaaataagaaatgtgattgactaaattatttgcatctgaggtccaaaaagaaaaCTAGAAACAAAAAGGAGGA-GCGGGGAGAGAGGGAACTTGATACCACA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2166310 111 + 4244037 tagtatgccacaaaataagaaatgtgattgactaaattatttgcatctgaggtcc-aaaagaaaaCTAGAAACAAAAAGGAGGA-GAGGGGAGAGAGGGAACTTGATATCACA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189351 112 + 4569836 tagtatgccataaaataagaaatgtgattgactaaattatttgcatctgaggtccaaaaagaaaaTTAGAAACAAAAAGGAGGA-GCAGGGAGAGAGGGAACTTGGTATCACA i colAng1.NW_012122154v1 C 0 C 0 s canFam3.chr9 21457522 105 + 61074082 taatgtgcc-----atcaggaatataattaactcaattatttgcaactaaaatccaaaaagaaaaaTCCAAAACACAG-GAGGA--AAAGAAGAGAGGGACCTTGATATTGCA i canFam3.chr9 I 1456 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e dasNov3.JH570468 462350 0 - 852752 C e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=149266.000000 s hg38.chr17_JH159148v1_alt 7686 37 + 88070 AAGGAAGTGCCATGGATGGAATGTCTCCCAGAAACGA s gorGor5.CYUI01015385v1 4070373 37 + 4267968 AAGGAAGTGCCATGGATGGAATGTCTCCCAGAAACGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050797 37 - 2193130 AAGGAAGTGCCATGGCTGGAATGTCTCCCAGAAATGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30127316 37 - 77216781 AAGGAATTGCCATGGATGGAATGTCTCCCGGAAATGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28040169 37 - 80997621 AAGGAATTGCCATGGATGGAATGTCTCCCGGAAATGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2096774 37 + 10377808 AAGGAATTGCCATGGATGGAATGTCTCCCGGAAATGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1982142 37 - 8458610 AAGGAATTGCCATGGATGGAATGTCTCCCGGAAATGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64926460 37 + 75148670 AAGGAATTGCCATGGATGGAATGTCTCCTGGAAATGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2166421 37 + 4244037 AAGGAATTGCCATGGATGGAATGTCTACCGGAAATGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189463 37 + 4569836 AAGGAACTGCCATGGATGGAATGTCTCCCAGAAATGA i colAng1.NW_012122154v1 C 0 C 0 s canFam3.chr9 21457627 37 + 61074082 AAAGAATGACAATAGTTGGAATATATTTTAGAAAtga i canFam3.chr9 C 0 I 4882 s dasNov3.JH570468 462350 10 - 852752 CAGAAAGTAC--------------------------- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1018892.000000 s hg38.chr17_JH159148v1_alt 7723 239 + 88070 TCTTTGGGTGGACACCCTGTGCAAAACCTCTCTTGAgacatgaatggaacttcacggaagatgaatcctta----agtaagcctgtgaaagaattctcaaaagtattatttctcagagatttcaaaattaaaataacaattacatattactttacaggtattagatttgcaaaaaatagagtgctATATcagagcccagcaaacttatcctgtaaagggacagata-tacataatttaggcttt s gorGor5.CYUI01015385v1 4070410 240 + 4267968 CCTTTGGGTGGACACCCTGTGCAAAACCTCTCTTGAgacatgaatggaacttcacggaagatgaatcctta----agtaagcctgtgaaagaattctcaaaagtattatttctcagagatttcaaaattaaaataacaattacatattactttacaggtattagatttgcaaaaaatagagtgctATATcagagcccagcaaacttattctgtaaagggacagatagtacataatttaggcttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2050834 240 - 2193130 CGTTTTGGTGGACACCCTGTGAAAAACCTCTCTTGAgacatgaatggaacttcacggaagacgaatcctta----agtaagcctgtgaaagaattctcaaaagtattatttctcaaagatttcaaaattaaaataacaattacgtattactttacaggtattagatttgcaaaaaacagagtgctATATcagagcccagcaaacttattctgtaaagggacagatagtacataattcaggcttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30127353 240 - 77216781 CATTTTGGTGGACACCCTGTGCAAAATCTCTCTTGAGACATGAATGGAACTTCGTAGAAGATGAATCCTTA----AGAAAGCCTGTGAAAGAATTCTCGAAAGTATTATTTCTGAGAGATTTCAAaattaaaataacaattacatattactttacaGGTATTAGATTTGCAAAAAATAGAGTGCTCTATTAGAGCCTAgcaaacttattctgtaaagggacagagagcacataatttaggcttt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28040206 240 - 80997621 CATTTTGGTGGACACCCTGTGCAAAATCTCTCTTGAgacatgaatggaacttcgtagaagatgaatcctta----agaaagcctgtgaaagaattctcgaaagtattatttctgagagatttcaaaattaaaataacaattacatattactttacaggtattagatttgcaaaaaatagagtgctCTATTAGAGCCTAgcaaacttattctgtaaagggacagagagcacataatttaggcttt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2096811 240 + 10377808 CATTTTGGTGGACACCCTGTGCAAAATCTCTCTTGAGACATGAATGGAACTTCGTAGAAGATGAATCCTTA----AGAAAGCCTGTGAAAGAATTCTCGAAAGTATTATTTCTGAGAGATTTCAAaattaaaataacaattacatattactttacaGGTATTAGATTTGCAAAAAATAGAGTGCTCTATTAGAGCCTAgcaaacttattctgtaaagggacagagagcacataatttaggcttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1982179 240 - 8458610 CATTTTGGTGGACACCCTGTGCAAAATCTCTCTTGAGACATGAATGGAACTTCGTAGAAGATGAATCCTTA----AGAAAGCCTGTGAAAGAATTCTCGAAAGTATTATTTCTGAGAGATTTCAAaattaaaataacaattacatattactttacaGGTATTAGATTTGCAAAAAATAGAGTGCTCTATTAGAGCCTAgcaaacttattctgtaaagggacagacagtaggtaatttaggcttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64926497 240 + 75148670 CATTTTGGTGGACACCCTGTGCAAAATCTCTCTTGAgacatgaatggaactgcgtagaagatgaatcctta----agaaagcctgtgaaagaattctcgaaagtattatttctgagagatttcaaaattaaaataaaaattacatattactttacaggtattagatttgcaaaaaatagagtgctCTATcagagcctagcaaacttattctgtaaagggacagagagtacgtaatttaggcttt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2166458 240 + 4244037 CATTTTCGTGGACACCCTGTGCAAAATCTCTCTTGAgacgtgaatggaacttcgcagaagatgaatcctta----agaaagcctgtgaaagaattctcgaaagtattatttctgagagatttcaaaattaaaataacaattacatattactttacaggtattagatttgcaaaaaatagagtgctCTATcagagcctagcaaacttattctgtaaagggacagagagtacgtaatttaggcttt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189500 238 + 4569836 CATTTTGGTGGACACCCTGTGCAAAATCTCTCTTGAgacatgaatggaacttcatagaagatgaatcctta----agaaagcctgtgaaagaattctcgaaagtattatttctgagagatttcaagattaaaataacaattacatattactttacagatattagatttgcaaaaaatagagtgctATATcagagcctagcaaacttactctgtaaagggacag--agtacgtaatttaggcttt i colAng1.NW_012122154v1 C 0 C 0 s dasNov3.JH570468 462360 211 - 852752 -------------------------------CTTGAAatatgaatggaactttacagaaggtgactccctaatctaataaacctatgcaaagatgctcaaaatta-aatttttcatagaaatccaaattaaaataataattagatatcactttacagccattagactggcaaaacatacaatgctATATcagaggttggcaaattt-ttctgtgaaagtatagctagtaaatattttagggttt i dasNov3.JH570468 C 0 I 648 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=3636705.000000 s hg38.chr17_JH159148v1_alt 7962 942 + 88070 gtggggcacatggtctctgttgcaactactgaattttgccgttgtatcattgcattatatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacaggctggggctctgtttggctcatggtgagacgggaagagtttccttgttcccctcgcagggcgtgcaacgggggcgtgg--------------ctcgcttcttccgtgccccactgctcacacttctaggggaagcatgcagatgggcaggctttggggctctgaccccacggcagcgtctaggggtgagtgtttacagctgaagccccagtgggtgtgtgtacagggtactctttcagtttagcctccgtccatagatgggttg----tgttagttagctcaattagaccc-cctgccttatggcaaggacagagggctttctgtatcccagggtttcctgccttgttgtactggaggaatcggatcacacatgggcttggagaatgagtgcaaggttttattgagtggaagtagctctcagcagacgggggagccagaagggggatggagtgggaaggtggttttcccctggagttgggctgctcagccaggcttccctcatcccgcccccgacaaactcactatggttccccctgtcgatggcctgccgtcctgctggcgtctgccgctgcctgtcgg--tgtgctcttctgacgatttgctcctctcggatgtccagctgcctgtgtctcttcccactaggcacaggatgagggcgtggtgggccagggtggttttgggaaatgcaacgtttgggcacaaaaacagaaatgcctgttcttattcattcagaaatgcctgttccctaggtccgtgggcacagtaggggtggagtcctcaccagggacccacccttcttctcccagcact-------------tccctgcc-------ccgctcctgtatcaa s gorGor5.CYUI01015385v1 4070650 941 + 4267968 gtggggcacatggtctctgttgcaactactgaattttgccgttgtatcattgcattatatcattatatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacaggctggggctctatttggctcatggtgaaacgggaagagtttccttgttcccctctcagggcgtgcaacgggggcgaag--------------ctcgcttcttccgtgccccactgctcatacttctgggggaagcatgcagatgggcaggctttggggctctga-cccacggcagcgtctaggggtgagtgtttacagctgaagccccagtgggtgtgtgtacacggtactctttcagtttagcctccgtccatagatgggttg----tgttagttagctcaattagaccc-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttgttgtactggaggaatcggatcacacatgggcttggagaatgagtgcaaggttttattgagtggaagtagctctcagcagacgggggagccagaagggggatggagtgggaaggtggttttcccctggagttgggctgctcagccaggcttccctcatcccgcccccgacaaactcactatggttccccctgtcgatggcctgccgtcctgctggcgtctgccgctgcctgtcgg--tgtgctcttctgacgatttgcttctctcggatgtccagctgcctgtgtctcttcccactaggcacaggatgagggcgtggtgggcaagggtggttttgggaaatgcaacgtttgggcacaaaaacagaaatgtctgttctcattcatttagaaatgccttttccctaggtccgtgggcacagtaggggtggagtcctcgccagggacccacccttcttctcccagcact-------------tccctgcc-------ccgctcctgtgtcaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2051074 946 - 2193130 gtggggcacatggactctgttgcaactactgaattttgccatcgtatcattgcattgtatcattacatttataggcaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacaggctggggctttatttggctcatggtgaaacgggaaaagtttccttgttcccctcgcagggcatgcaatgggggcgtgg--------------ctggcttcttccgtgccctgctgctcaaactcctaggggaagcatgcagatgggcaggctgtggggctctgaccccacggcagcgtctaggggtgagtgtttacagctgaagccccagtgggtgtgtgtatagggtactctttccgtttagccttcgtccatagatgtgttgtgtttgttaattagctcaattagaccctcctgccttattacaaggacagagggctttctgtatcccagggtttcctgccttggtgtactggaagaatcggatcacacgtgggattggagaatgagtgcaaggttttattgagtggaagtagctctcagcagatggtggagccagaagggggatggagtgggaaggtggttttcccctggagttgggctgctcagccaggctcccctcatcccgcccccaacaaactctccatggttccccctgtcgatggcctgccggcttgctggcatctgccgctgcctgtcggtatgtgctcttccgccgatttgttcccctcggatgtccagctgcctgtgtctcttcccaccaggcacaggatgagggcgtggtgggccagggtggttttgggaaatgcaacgtttgggcacaaaaacagaaatgcctgttctcattcattcagaaatgcctgttccctaggtccgtgggcacagtaggggtggagtcctcgccagggacccacgcttctt---ccagcact-------------tccctgcc-------ccactcccatatcaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30127593 959 - 77216781 gtggggcacatggtctctgttgcaactactgaatgttgccattgtaccattgcattgtatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacgggctggggttctatttggctcatggtgaaacgggaaaagtttccttgttcccctcgcagggcgtgcaatgggggcatggcaatgggggcatgactggcttcttctgtgccccgctgctcagacttctaggggaagcgtgcagatgggcaggctgtggggctctgaccccacggcagtgtctaggggtgagtgtttacagctgaagccccagtggatgtgtgtacagggtactctttcaggttagcctccctccataggtgggttg----tgttagttagctcaattagaccc-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttggtgtacgggaggaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagcggaagtagctctcagcagatggtggagccagaagggggatggagtgggaaggtgg-tttcgtctggagttgggccgctcagtcaggctcctcccaccccgccccc-acaaactctccgtggtttccccagtcgatggcctgccggcctgctggcgtctgccgccgcctgtcgg--tgtgctcttcccccggtttgtttctct-ggatgtccagctgcctgtgtctcttcccaccaggcacaggatgagggcgtagtgggccagggtggttttgggaattgcaacatttggacacaaaaacagaaatgcctgttctcattcattcagaaattcctgttccctaggtccatgggcacagttggggtggagtcctcgccagggacccagccttcttctcccagcact-------tcctgccccctgcc-------cccctcccatatcaa i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28040446 959 - 80997621 gtggggcacatggtctctgttgcaactactgaatgttgccattgtaccattgcattgtatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacgggctggggttctatttggctcatggtgaaacgggaaaaatttccttgttcccctcgcagggcgtgcaatgggggcatggcaatgggggcatgactggcttcttccgtgccccgctgctcagacttctaggggaagcgtgcagatgggcaggctgtggggctctgaccccacggcagcgtctaggagtgagtgtttacagctgaagccccagtggacgtgtgtacagggtactctttcaggttagcctccctccataggtgggttg----tgttagctagctcaattagaccc-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttggtgtaccggaggaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagtggaagtagctctcagcagatggtggagccagaagggggatggagtgggaaggtgg-tttcctctggagttgggccgctcagtcaggctcctcccaccccgctccc-acaaactctccgtggtttccccagtcgatggcctgccggcctgctggcgtctgccgccgcctgtcgg--tgtgctcttcccccggtttgtttctct-ggatgtccagctgcctgtgtctcttcccaccaggcacaggatgagggcgtagtgggccagggtggttttgggaattgcaacatttggacacaaaaacagaaatgcctgttctcattcattcagaaattcctgttccctaggtccatgggcacagttggggtggagtcctcgccagggacccagccttcttctcccagcact-------ccctgccccctgcc-------cccctcccatatcaa i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2097051 956 + 10377808 gtggggcacatggtctctgttgcaactactgaatgttgccattgtaccattgcattgtatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacgggctggggttctatttggctcatggtgaaacgggaaaagtttccttgttcccctcgcagggcgtgcaatgggggcatggcaatgggggcatgactggcttcttccgtgccccgctgctcagacttctaggggaagcgtgcagatgggcaggctgtggggctctgaccccacggcagcgtctaggggtgagtgtttacagctgaagccccagtggatgtgtgtacagggtactctttcaggttagcctccctccataggtgggttg----tgttagttagctcaattagacca-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttggtgtaccagaggaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagtggaagtagctctcagcaga---tggagccagaagggggatggagtgggaaggtgg-tttcctctggagttgggccgctcagtcaggctcctcccaccccgccccc-acaaactctccgtggtttccccagtcgatggcctgccggcctgctggcgtctgccgccgcctgtcgg--tgtgctcttcccccggtttgtttctct-ggatgtccagctgcctgtgtctcttcccaccaggcacaggatgagggcgtagtgggccagggtggttttgggaattgcaacatttggacacaaaaacagaaatgcctgttctcattcattcagaaattcctgttccctaggtccatgggcacagttggggtggagtcctcgccagggacccagccttcttctcccagcact-------tcctgccccctgcc-------cccctcccatatcaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1982419 963 - 8458610 gtggggcacatggtctctgttgcaactactgaatgttgccattgtaccattgcattgtatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacgggctggggttctatttggctcatggtgaaacgggaagagtttccttgttcccctcgcagggcgtgcaatgggggcatggcaataggggcatgactggcttcttccgtgccccactgctcagacttctaggggaagcgtgcagatgggcaggctgtggggctctgaccccacggcagcgtctaggggtgagtgtttacagctgaagccccagtggatgtgtgtacagggtactctttcaggttagcctccctccataggtgggttg----tgttagttacctcaattagaccc-cctgccttattgcaaggacagaggactttctgtgtcccagggtttcctgccttggtgtaccggaagaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagtggaagtagctctcagcagatggtggagccagaagggggatggagtgggaaggtgg-tttcccctggagttgggccgctcagtcaggctcctcccaccccgccccc-acaaactctccgtggtttccccagtcgatggcctgccggcctgctggcgtctgccgcggcctgtcag--tgtgctcttcccccggtttgtttctct-ggatgtccagctgcctgtgtctcttcccaccaggcacaggatgagggcgtagtgggccagggtggttttgggaattgcaacatttggacacaaaaacagaaatgcctgttctcattcattcagaaattcctgttccctaggtccatgggcacagttggggtggagccctcgccagggacccagccttctg---ccagcact-------ccctgccccctgcccCCTGCGCCCCTCCCATATCAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64926737 959 + 75148670 gtggggcacatggtctctgttgcaactactgaatgttgccattgtaccattgcattgtatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaactttgtaaaaacgggctggggttctatttggctcatggtgaaacgggaaaagtttccttgttcccctcgcagggcgtgcaatgggggcgtggcaatgggggcatgactggcttcttccgtgccccgctgctcagacttctaggggaagcgtgcagatgggcaggctgtggggctctgaccctacggcagcgtctaggggtgagtgtttacagctgaagccccagtggatgtgtgtacagggtactctttcaggttagcctccctccataggtgggttg----tgttagttagctcaattagaccc-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttggtgtaccggaagaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagtggaagtggctctcagcagatggtgcagccagaagggggatgcagtgggaaggtgg-tttcccctggagttgggccgctcagtcaggctcctcccaccccgccccc-acaaactctccgtggtttccccagtcgatggcctgccggcctgctggcgtctgccgcggcctgtagg--tgtgctcttcccccgggttgtttctct-ggatgtccagctgcctgtgtctcttcccactaggcacaggatgagggcgtagtgggccagggtggttctgggaaatgcaacatttggacacaaaaacagaaatgcctgttctcattctttcagaaattcctgttccctaggtccatggacacaggtggggtggagtcctcgccagggacccagccttcttctcccagcact-------ccctgccccctgcc-------cccctcccgtatcaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2166698 964 + 4244037 gtggggcacatggtctctgttgcaactactgaatgttgccattgtaccattgcattgtatcattacatttatagacaatatgtaagcaaatgagtgtggctgggttctaataaaac--tgtaaaaacgggctggggttctatttggctcatggtgaaacgggaaaagtttccttgttcccctcgcagggcgtgcaatgggggcatggcaatgggggcatgactggcttctcccgtgacccgctgctcagacttctaggggaagcgtgcagatgggcaggctgtggggctctgaccccaaggcagcgtctaggggtgagtgtttacagctgaagccccagtggatgtgtgtacagggtactctttcaggttaacctccctccataggtgggttg----tgttagttagctcaattagaccc-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttggtgtaccggaggaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagtggaagtagctctcagcagatggtggagccagaagggggatggagtgggaaggtgg-tttcccctggagttgggccgctcagtcaggctcctcccaccccgccccc-acaaactctccgtggtttccccagtcgatggcctgccggcctgctggcgtctgcggcggcctgtcgg--tgtgctcttcccccggtttgtttctct-ggatgtccagctgcctgtgtctcttcccactaggcacaggatgagggcgtagtgggccagggtggttttgggaattgcaacatttggacacaaaaacagaaatgcctgttctcattctttcagaaattcctgttccctaggtccatgggcacagttggggtggagccctcgccagggacccagccttcttctcccagcactccctgccccctgcccCCTGCC-------CCCCTCCCATTTCAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2189738 941 + 4569836 gtggggcacatggtctctgttgcaactactgaatgttgccattataccattgcattgtatcattacatttatagacaatatgtaagcaaatgaatgtggctgggttctaataaaactttgtaaaaccaggctggggttctatttggctcatggtgaaacgggaaaagtttccttgttcccctcgcaaggcgtgcaatgggggcatggcaatgggggcatgactggcttcttccgtgccccgctgctcaaacttctaggggaagcgtgcagatgggcaggttgtggggctctgaccccacggcagcgtctaggggtgagtgtttacagctgaagccccaatggacgtgtgtacaggatactctttcaggttagcctccctccataggtgggtgg----tgttagttagctcaattagaccc-cctgccttattgcaaggacagagggctttctgtatcccagggtttcctgccttggtgtactggaagaatcggatcacacatgggcttggaggatgagtgcaaggttttattgagtggaagtagctctcagcagatgatggagccagaagggggatggagtgggacggtgg-ttttccctggagttgggctgctcagtcaggctcccctcaccccgccccc-acaaactctacacggtttccc-------------------------gcatctgccgtggcctgtcgg--tgtgctcttccgctggtttgtttctct-ggatgtccagctgcctgtgtctcttcccactaggcacaggatgagggcgcagtgggccagggtggttttgggaaatgcaacatttggacacaaaaacagaaatgcctgttctcattcattcagaaattcctgttccctaggtccatgggcagagttggggtggagtccttgccagggacccagtcttcttctcccagtactccttgccccctgccccctgcc-------cgcctcccatatcaa i colAng1.NW_012122154v1 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22842526 1560 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=689394.000000 s hg38.chr17_JH159148v1_alt 8904 161 + 88070 tgggccatagttttctgactcctgTgctatataatgccaagtgttggtgggagtg--ggaatttac---aggaattttcctgcattgctaatgggattgttggcttgtttggccactctaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctcc s gorGor5.CYUI01015385v1 4071591 161 + 4267968 tgggccatagttttctgactcctgTgctatataatgccaagtgttggtgggagtg--ggaatttac---aggaattttcccgcattgctaatgggattgttggcttgtttggccactctaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctcc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2052020 162 - 2193130 tgggccatagttttctgactcctgTgctatataatgctaagtgttgatgggagtg--ggaatttac---aggaattttcctgcattgctaatggcattgttggcttgtttggccattctaaagaaaccatctgaaactatttatgtaaattatgtaagtg-atgctcc i nomLeu3.chrUn_GL397460_1 C 0 M 221 s rheMac8.chr16 30128552 160 - 77216781 tgggccatagttttctgactcatgTgctatgtaacgccaagtgttggtgggagtg--ggaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctgc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28041405 160 - 80997621 tgggccatagttttctgactcatgTgctatataacgccaagtgttggtgggagtg--ggaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctgc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2098007 160 + 10377808 tgggccatagttttctgactcatgTgctatataatgccaagtgttggtgggagtg--ggaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctgc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1983382 160 - 8458610 TGGGCCATAGTTTTCTGACTCATGTgctatataatgccaaatgtcagtgggagtg--gaaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctgc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64927696 160 + 75148670 tgggccatagttttctgactcatgTgctatataacgccaagtgttggtgggagtg--ggaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctgc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2167662 160 + 4244037 TGGGCCATAGTTTTCTGACTCATGTgctatataacgccaagtgttggtgggagtg--ggaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttatgtaaattatgtaagtg-atgctgc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2190679 160 + 4569836 tgggccatagttttctgactcatgTgctatgtaatgccaagtgttggtgggagtg--gaaatttacattagcaattt----gcattgctaatgggattgttggcttatttggtcactttaaag-aacaatctgaaactatttacgtaaattatataagtg-atgctgc i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22844086 164 + 28711273 tgggccatacttttctgactcctgtgttatataatgccaagtgttggtaggagggttgagttttgt---aggaatcttcctgcattattggtgggattgttagttcttttggccatttttaag-aacgacctgaaactctttatgcaaattttataaatgtatgtccc i otoGar3.GL873537 I 1560 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=703159.000000 s hg38.chr17_JH159148v1_alt 9065 197 + 88070 atgatccagcaatccaacacctgagtgtgtatttccagaaaattctcacacaggtcctcagggaggtgtacatgtggatgttcactatagcatccctatggtggcaaaaacgtcaaaggaaagctggtgtccaaca-------ctgtgaaagtgggtaggcaac--tcggtgatcctcttcatggagtatcatgcaggaattaata s gorGor5.CYUI01015385v1 4071752 197 + 4267968 atgatccagcaatccaacacctgagtgtgtatttccagaaaattctcacacaggtcctcagggaggtgtacatgtggatgttcactgtagcatccctatggtggcaaaaacgtcaaagggaagctggtgtctaaca-------ctgtgaaagtgggtaggcaac--ttggtgatcctcttcatggagtatcatgcaggaattaata i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30128712 197 - 77216781 atgatccagcaatcctgcacctgagtgtgtatttccagaaaattctcacacaggtccatagagagatgtacatatggatgttcactgtagcatcactgtggtggcaagaacgtcaaaggaaagttggtgtccacca-------ctgtgaaagtgggtaggcaac--ttggtgattctcttcatggagtattgtgcagaaattagta i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28041565 197 - 80997621 atgatccagcaatcctgcacctgagtgtgtatttccagaaaattctcacacaggtccatagagagatgtacatatggatgttcactgtagcatcactgtggtggcaagaacgtcaaaggaaagttggtgtccacca-------ctgtgaaagtgggtaggcaac--ttggtgattctcttcatggagtattgtgcagaaattagta i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2098167 197 + 10377808 atgatccagcaatcctgcacctgagtgtgtatttccagaaaattctcacacaggtccatagagagatgtacatatggatgttcactgtagcatcactgtggtggcaagaacgtcaaaggaaagttggtgtccacca-------ctgtgaaagtgggtaggcaac--ttggtgattctcttcatggagtattgtgcagaaattagta i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1983542 197 - 8458610 atgatccagcaatcctgcacctgagtgtgtatttccagaaaattctcacacaggtccatagagaggtgtacatatggatgttcactgtagcatcaccgtggtggcaaaaatgtcaaaggaaagttggtgtccacca-------ctgtgaaagtgggtaggcaac--ttggtgattctcttcatggagtattgtgcagaaattagta i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64927856 197 + 75148670 atgatccagcaatcctgcacctgagtgtgtatttccagaaaattctcacacaggtccatagaggggtgtacatatggatgttcactgtagcatcactgtggtggcaagaacgtcaaaggaaagttggtgtccacca-------ctgtgaaagtgggtaggcaac--ttggtgattctcttcgtggagtattgtgcagaaattagta i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2167822 196 + 4244037 atgatccagcaatcctgcacctgagtgtgtatttccagaaaattctcacacaggtccat-gaggggtgtacatatggatgttcactgtagcatcactgtggtggcaagaacgtcaaaggaaagttggtgtccacca-------ctgtgaaagtgggtaggcaac--ttggtgattctcttcatggagtattgtgcagaaattagta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2190839 197 + 4569836 atgatccagcaatcctgcccctgagtgtgtatttctagaaaattctcacacaggtccatagagaggtgtgcatacggatgttcactgtagcatcactgtggtggcaaaaacgtcaaaggaaaattggtgtccacca-------ctgtgaaagtggataggcaac--ttggtgattctcttcatggagtattgtgcaggaattagta i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22844250 204 + 28711273 atggtccagcagtccttcttctgagtatacattccaagaaaattctcacacagatccatagagagacgcatatgaggata-tcactgtggcatt-ctatagtgccatgaacttcaagggaaatccagtgtccactgtccacttctgggcaagtggataggcaacgtgtggtgattctcatcacgtagtattatgctggaattagaa i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e nomLeu3.chrUn_GL397460_1 2052182 221 - 2193130 M e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1859477.000000 s hg38.chr17_JH159148v1_alt 9262 475 + 88070 acaatagattacatatacacactgtagcatagatggatttttaaaaa--ttctgcttaatgacaaaccagaatgagatatattactgattgctatttacataaagtatatgtgtactgaac-------aatactttataaggatatatacaaatccattaaataaatttaatatgcgttgaatatacattagacagaatagcatagtggcctataggaaacgaagggagtaaagggagaagaagaagtaaattaactgatttataagtacat--------aaaaaataaataagagagggaccatgcaaaaatcacagatgata---------------------atAATTCAATTATTTATAACTAAGGTCCCAAAAGAAAATTTTTTTAAAAAGGAA-GAAGGAGAGAGAGGGAACTTGACACCACAAAGGAATTACCGTGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACACCTTCCATG s gorGor5.CYUI01015385v1 4071949 475 + 4267968 acaatagattacatatacacactgtagcatagatggatttttaaaaa--ttctgcttaatgacaaaccagaatgagatatattactgattgctatttacataaagtatatgtgtactgaac-------aatactttataaggatatatacaaatccattaaataaatttaatatgctttgaatatacattagacagaacagcatagtggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatttatacgtacat--------aaaaaagaaataagagagggaccatgcaaaaatcacagatgata---------------------atAATTCAATTATTTATAACTAAGGTCCCAAAAGAAAATTTTTTTAAAAAGGAA-GAAGGAGAGAGAGGGAACTTGACACCACAAAGGAATTACCGTGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGAGGGACACCCTGTTCAAATTCTCTCTCCCACACCTTCCATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2052406 475 - 2193130 acagtagattacatatacacagtgtagcatggatggatttttaaaaa--ttctgcttaatgacaaaccagaatgagatatactactgattgctatttacataaagtatatgtatactaaac-------aatactttataaggatatatacaaatccattaaataaacttaatatgcattgaatatacattagacagaatagcatagtggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatttataagtacat--------aaaaaataaaaaagagagggaccatgcaaaaatcacaggtgata---------------------atAATTCAGTTATTTACAACTAAGGTCCCAAAAGAAAATTTTTTTAAAAAGGAA-GAAGGAGAGAGAGGGAACTTGACACCACAAAGGAATTACCGTGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i nomLeu3.chrUn_GL397460_1 M 221 C 0 s rheMac8.chr16 30128909 459 - 77216781 acagtagattacatatacacagtgttgcatagatgggtttttaaaaa--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaggtacatgtgtactaaac---aataaatactttataaggatatatacaaatgaattaaataaatttaatgtgcattgaatatacattagacagaatagcatagaggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatatgtaagtacat--------aaaaaataaataagagagagaccatgccaaaatcacagatgata---------------------ataattcaatcatttataactgaggtcccaaaagaaTATTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGACAGCAGAAAGGAATTACCATGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28041762 459 - 80997621 acagtagattacatatacacagtgttgcatagatgggtttttaaaaa--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaggtacatgtgtactaaac---aataaatactttataaggatatatacaaatgaattaaataaatttaatgtgcattgaatatacattagacagaatagcatagaggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatatgtaagtacat--------aaaaaataaataagagagagaccatgccaaaatcacagatgata---------------------atAATTCACTTATTTATAACTGAGGTCCCAAAAGAATATTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGACAGCAGAAAGGAATTACCATGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2098364 459 + 10377808 acagtagattacatatacacagtgttgcatagatgggtttttaaaaa--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaagtacatgtgtactaaac---aataaatactttataaggatatatacaaatgaattaaataaatttaatgtgcattgaatatacattagacagaatagcatagaggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatatgtaagtacat--------aaaaaataaataagagagagaccatgccaaaatcacagatgata---------------------atAATTCAATTATTTATAACTGAGGTCCCAAAAGAATATTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGACAGCAGAAAGGAATTACCATGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1983739 459 - 8458610 acagtagattacatatacacagtgttgcatagatggatttttaaaaa--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaagtacatgtgtactaaaa---aataaatactttataaggatatatacaaatgaattaaataaatttaatgtgcattgaatatacattagacagaatagcatagaggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatatataagtacat--------aaaaaataaataagagagagaccatgccaaaatcacagatgata---------------------atAATTCAATTATTTATAACTGAGGTCCCAAAAGAATATTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGACAGCAGAAAGGAATTACTGTGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64928053 467 + 75148670 acagtagattacatatacacagtgttgcatagttgggtttttaaaaa--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaagtacatgtgtactaaac---aataaatactttataaggatatatacaaatgaattaaataaatttaatgtgcattgaatatacattagacagaatagcatagaggcctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatatataagtacataaaaaataaaaaaataaataagagggagaccatgccaaaatcacagatgata---------------------atAATTCAATTATTTATAACTGAGGTCCCAAAAGAATATTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGACAGCAGAAAGGAATTACCGTGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2168018 451 + 4244037 acagtagattacatatacacagtgttgcatagatggatttttaaaaa--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaagtacatgtgtactaaaa---aataaatactttataaggatatatacaaatgaattaaataaatttaatgtgcattgaatatacattagacagaatagcatagaggcctataggaaaagaagggagtaaagggagaagaagaagtaagttaactgatatataagtacat--------aaaaaataaataagagagagaccatgccaaaatcaca---gata---------------------ataatTCAATTATTTATGACTGAGGTCCCAAAATAATATTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGACAGCAGAAAGGAATTACTGTGGATAGAATGTCTTCCAGAAA--------------------------TGACATTTT-----CCACCCTGTTCAAATTCTCCCTCCCACATCTTCCATG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2191036 460 + 4569836 acagtagattacgtatacacagtgttgcatagatggatttctaaaga--ttctgcttaaggacaaaccagaa-----------------tgctatttatataaagtacatgtgtactaaaa---aataaatactttataaggatatatacaaatgaattaaataaatttaatatgcattgaatatatgttagacagaatagcatagaggtctataggaaaagaagggagtaaagggagaagaagaagtaaattaactgatatataagtacat-------aaaaaaataaataagagagagactatgccaaaatcacagatgata---------------------ataattcaattatttacacctgaggtcccaaaagaaTGTTTTTTAAAAAAG----GAAGGAGAGAGAGGGAACTTGAGAGCAGAAAGGAATTACCATAGATAGAATGTCTTCCAGAAA--------------------------TGACATTTTGATGGACACCCTGTTCAAATTCTCTCTCCCACATCTTCCATG i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22844454 484 + 28711273 atggaagattgtatatacacatagctgcacagacaaatcttaaaaaaatttctgcttagtgacaaagcagaatgagatatactgggcactgttatttatgtaaaggacacatgtgctaaacaacaatgaacactttatgagaacacacgcaaa------------------------------------taaacagagtag---aagagctgatggaagagaatgggggca---tgagaacaggaattgaattcgttgatata-aaatacat---------aaaaataggtgagggagggcccttgaaatgaccaaagatgatcatgtaccataaaataaggagtatgactgacttattggcaactgaggtccagaaagaaaactaaaaaaAAAAAAAAGGAAGAGGAGAGAGGGACCTTGACATCATAAAGG----TCCATGTATGGAGTGTCTTCCAGAAAGAAGACACTTTCTGTTGAAGAGCCTTCAACTTTCTGTTGAAGAGCCTAATCAAATTCCCTCTCCCACATCTTCCACG i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22105238 5401 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=915331.000000 s hg38.chr17_JH159148v1_alt 9737 217 + 88070 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GATGCACCTCATCTCAT-ATTGCATAGACTTTTCAAGAATGCTTCTTAC-----AAGAGGATGCAGACATTGTTT--AGGAGTTATATTAACTTTAATAATTTGTTGATTG---ATACCAGGATTCTCAAGACACCTGAAACTTCAAATTTCATTTTATAATAG-----TTTTTTTTTT--ACCCA------TCTAC------------ s gorGor5.CYUI01015385v1 4072424 220 + 4267968 GAGATTTCCGTCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GATGCACCTCATCTCAT-ATTGCATAGACTTTTCAAGAATGCTTCTTAC-----CAGAGGATGTGGACATTGTTT-AAGGAGTTATATTAACTTTAATAATTCGTTTATTG---ATACCAGGATTCTCAAGACACCTGAAACTTCAAATTTCATTTCATAATAG-----TTTTTTTTTTTGACCCA------TCTAT------------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2052881 223 - 2193130 GAGATTTCCGTCATGCTAGAGGAAGATTATGGCTCTGGGAAGCA-GATGCACCTCATTTCAT-ATTGCATAGACTTTTCAACAATGTTTCTTAC-----AAAAAGATGCAGACATTGTTT-AAGGAGTTATATTAACTTTAATAATTCATTTATTG---ACACCAGGATTCTCGAGACACCTGAAACTTCAAATTTCATCTTATAATAG-----TTTTTTTGG---ACCCATCTAAGTCTAT------------ i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30129368 228 - 77216781 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGCACCTCATCTCAC-ATTGCACAGACTTTTCAACAATGTTTCTTAC-----AAGAGGATGCAGACATTGTTT-AAGGAGTTGTATTAACTTTAGTAATTTGTTTATTG---ATACCAGGATTCTCAAGATACCTGAAACTTCGAATTTCATTTTATAATAG---TTTTTTTTTTTCTGATCCATCTAAGTCTAT------------ i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28042221 228 - 80997621 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGCACCTCATCTCAC-ATTGCACAGACTTTTCAACAATGTTTCTTAC-----AAGAGGATGCAGACATTGTTT-AAGGAGTTGTATTAACTTTAATAATTTGTTTATTG---ATACCAGGATTCTCAAGATACCTGAAACTTCGAATTTCATTTTATAATAG---TTTTTTTTTTTCTGATCCATCTAAGTCTAT------------ i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2098823 231 + 10377808 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGCACCTCATCTCAC-ATTGCACAGACTTTTCAACAATGTTTCTTAC-----AAGAGGATGCAGACATTGTTT-AAGGAGTTGTATTAACTTTAATAATTTGTTTATTG---ATACCAGGATTCTCAAGATACCTGAAACTTCGAATTTCATTTTATAATAGTTTTTTTTTTTTTTCTGATCCATCTAAGTCTAT------------ i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1984198 229 - 8458610 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGCACCTCATCTCAC-ATTGCACAGACTTTTCAACAATGTTTCTTAC-----AAGAGGATGCAGACATTGTTT-AAGGAGTTATATTAACTTTAATAATTTGTTTATTG---ATACCAGGATACTCAAGATACCTGAAACTTCGAATTTCATTTTATAATAG--TTTTTTTTTTTCCTGATCCATCTAAGTCTAT------------ i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64928520 227 + 75148670 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGCACCTCATCTCAC-ATTGCACAGACTTTTCAACAATGTTTCTTAC-----AAGAGGATGCAGACATTGTTT-AAGGAGTTACATTAACTTCAATAATTTGTTTATTG---ATACCAGGATTCTCAAGACACCTGAAACTTCGAATTTCATCTTATAATAG----TTTTTTTTTCCTGACCCATCTAAGTCTGT------------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2168469 227 + 4244037 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGCACCTCATCTCAC-ATTGCACAGACTTTTCAAGAATGTTTCTTAC-----AAGAGGATGCAGACATTGTTT-AAGGAGTTATATTAACTTTAATAATTTGTTTATTG---ATACCAGGATTCTCAAGACACCTGAAACTTCAAATTTCATCTTATAATAG----TTTTTTTTTCCTGACCCATCTAAGTCTGT------------ i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2191496 218 + 4569836 GAGATTTCCATCATGCTAGAGGAAGGATATGGCTCTGGGAAGCA-GAGGTACCTCGTCTCAC-GTTGCACAGAC--------AATGTTTCTTAC-----AAGAAGATGCAGACATTATTT-AAGGAGTTATATTAACTTTAATAATTTATTTATTG---ATACCAGGATTCTCAAGACACCTGAAACTTCGAATTTCATTTTATAATAG-----TTTTTTTTTCTGACCCATCTAAGTCTAT------------ i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22844938 220 + 28711273 GAGAGTTCAGTCATGCTAGAGGGAGAATGAGGTCCTGGGAGGCAGGATACATGTGGCCTCATGACTGCAAGGAATTTTCAACAGTGTTTCTCACGGTATAAGAGGACGCAGGCACTGTTTAAAGGAGTTATA--AATCTC--TACTTTATTGACTG---ATGCCAGATTACTCTGCATACCTAGAATTACAAATT-----TTGTAACAG----------TATTTTGACCCATCTAAGTCTAT------------ i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22110639 222 - 122082543 GAGACATCAATCTTGCAGGAGAAGGGCTG-GGATCTTGGATGCAGGACGCCTCTTACTCTCT-ACTGCTGGAGATGTTCTATAATGTTCCTTAT----------GTTACAG----CATTT-CAGGGGATGGTTCATCTCCTTCAACATATTCATTAGCCATACTAGA--TGCCAGCATGCCTGAGTTTTCAAATTTCATCTTGCAATAT------------TTTCGACCTA-CCAAGTTTATTCTGATAACTAC i mm10.chr11 I 5401 I 253 e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1607100.000000 s hg38.chr17_JH159148v1_alt 9954 345 + 88070 CTCATAGTTTTTGTTGTCCCAATGACAGATTTCTCAGTTTTATAGGCAAGTGTGTTTACCGGCCATCTGCCAACATGCAAACTTCACATTCTAAACATGTCAAATGTGAAACATGAGTTGAGAAGCTTTGTG---------------TCTTTAACCATGC-TTGGCAACAGTTTAAATGACATAGCATGTATTTTCTCCTTTTAAGTTTgctagggcttgtccataaaacatctgaatctcctctaataagcaatgttctgccaagcctgaacatg----t-----aactaaatctttctttacacttatttTCAGGGCA-GGGAACAATTTTAAAAATACAAGAAAATTTTGAGA------AAAATATTACAAGAA s gorGor5.CYUI01015385v1 4072644 342 + 4267968 CTCATAGTTTTTGTTGTCCCAATGACAGATTTCTCAGTTTTATAGGCAAATATGTTTACCGGCCATCTGCCAACATGCAAACTTCACATTCTAAACATGTCAAATGTGAAACATGAGTTGAGAAGCTTTGTG---------------TCTTTAACCATGC-TTGGCAACAGTTTAAATGACATAGCATGTATTTTCTCC-TTTAAGTTTGCTAGGGCTTGTCCATAAAACATCTGAATCTCCTCTAATA--CAATGTTCTGCCAAGCCTGAACATG----T-----AACTAAATCTTTCTTTACACTTATGTTCAGGGCA-GGGAACAATTTTAAAAATACAAGAAAATTTTGAGA------AAAATATTACAAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2053104 345 - 2193130 CTCATAGTTTTTGTTGCTCCAGTGACAGATTTCTCAGTTTTATAGGCAAATGTGTTTACTGGCCATCTGCCAGCATGCAAACTTCACATTCTAAACATGTCAAATGTGAAACATGGGTTGGGAAGCTTTGTG---------------TCTTTAACCACGCTTTGGCAACAGTTTAAATGACATAGCATGTATTTTCTCCTTTTAAGTTTGCTAGATCTTGTCCATAAAACATCTGAATCT-CTCTAATAAGCAATGTTCTGCCAAGCCTGAACACG----C-----AACTAAATCTTTCTTTACACTTATGTTCAGGGAG-GGGAACAattttaaaaatacaagaaaattttgaga------aaaatattacaagaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30129596 346 - 77216781 CTCACAGTTTTTGTTGTTCCAATGACAGATTTCTCAGTCTTATAGGTGAATGTGTTTACTGGCCGTCTGCCAACATGCAAACTTCACATTCTAAACATGTCAGATGTGAAACATGGGTTGAGAAGCTTTGTA---------------TCTTTAACCACGC-TTGGCAACAGTTTAAATGACATAGCATTTATTTTCTCCTTTTAAGTTTGCTAGAGCTTGTCCATAAAACATCTGAATCCCCTTTCATAAGCAATGTTCTGCCAAGCCTGAACATG----T-----AACTAAATCTTTCTTTACCCTTATGTTCAGGGCAGGGGAACAattttaaaaacacaagaaaattttgaga------aaaatattacaagaa i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28042449 346 - 80997621 CTCACAGTTTTTGTTGTTCCAATGACAGATTTCTCAGTCTTATAGGTGAATGTGTTTACTGGCCGTCTGCCAACATGCAAACTTCACATTCTAAACATGTCAGATGTGAAACATGGGTTGAGAAGCTTTGTA---------------TCTTTAACCACGC-TTGGCAACAGTTTAAATGACATAGCATTTATTTTCTCCTTTTAAGTTTGCTAGAGCTTGTCCATAAAACATCTGAATCCCCTTTCATAAGCAATGTTCTGCCAAGCCTGAACATG----T-----AACTAAATCTTTCTTTACCCTTATGTTCAGGGCAGGGGAACAattttaaaaacacaagaaaattttgaga------aaaatattacaagaa i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2099054 346 + 10377808 CTCACAGTTTTTGTTGTTCCAATGACAGATTTCTCAGTCTTATAGGTGAATGTGTTTACTGGCCGTCTGCCAACATGCAAACTTCACATTCTAAACATGTCAGATGTGAAACATGGGTTGAGAAGCTTTGTA---------------TCTTTAACCACGC-TTGGCAACAGTTTAAATGACATAGCATTTATTTTCTCCTTTTAAGTTTGCTAGAGCTtgtccataaaacatctgaatcccctttaataagcaatgttctgccaagcctgaacatg----t-----aactaaatctttctttacccttatgttcagGGCAGGGGAACAattttaaaaacacaagaaaattttgaga------aaaatattacaagaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1984427 344 - 8458610 CTCACAGTTTTTGTTGTTCCAGTGACAGATTTCTCAGTCTTATAGGTGAATGTGTTTACTGGCCGTCTGCCAACATGCAAACTTCACATTCTAAACATGTCAGATGTGAAACATGGGTTGAGAAGCTTTGTA---------------TCTTTAACCACGC-TTGGCAACAGTTTAAATGACATAGCATTTAGTTTCTCCTTTTAAGTTTGCTAGAGCTTGTCCATAAAACATCTGAATCCCCTTTAATAAGCAATGTTCTGCCAAGCCTGAACATG----T-----AACTAAATCTTTCTTTACCCTTATGTTCAGGGCAGGGGAACAattttaaag--acaggaaaattttgaga------aaaatattacaagaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64928747 346 + 75148670 ATCACAGTTTTTGTTGTTCCAATGACAGATTTCTCAGTCTTATAGGTGAATGTGTTTACTGGCCATCTGCCAACATGCAAACTTCACATTCTAAACATGTCAGATGTGAAACATGGGTTGAGAAGCTTTGTA---------------TCTTTAACCACGC-TTGGCAACAGTTTAAATGACATAGCATTTATTTTCTCCTTTTAAGTTTGCTAGAGCTTGTCCATAAAACATCTGAATCCCCTTTAATAAGCAATGTTCTGCCAAGCCTGAACATG----T-----AACTAAATCTTTCTTTACCCTTATGTTCAGGGCAGGGGAACAattttaaaaacacaagaaaattttgaga------aaaatattacaagaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2168696 346 + 4244037 CTCACAGTTTTTGTTGTTCCAATGACAGATTTCTCAATCTTATAGGTGAATGTGTTTACTGGCCATCTGCCAACATGCAAACTTCACATTCTAAACATGTCAGATGTGAAATATGGGTTGAGAAGCTTTGTA---------------TCTTTAACCACGC-TTGGCAACAGTTTAAATGACATAGCATTTATTTTCTCCTTTTAAGTTTGCTAGAGCTTGTCCATAAAACATCTGAATCCCCTTTAATAAGCAATGTTCTGCCAAGCCTGAACATG----T-----AACTAAATCTTTCTTTACCCTTATGTTCAGGGCAGGGGAACAattttaaaaacacaagaaaattttgaga------aaaatattacaagaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2191714 346 + 4569836 CTCACAGTTTTTTTTGTTCCAATGGCAGATTTCTCAGTCTTATAGGTGAATGTGGTTACTGGCCATCCGCCAACATGCAAACTTCACATTCTAAACAAGTCAGATGTGAAACATGGGTTGAGAAGCTTTGTA---------------TCTTTAACTACGC-TTGGCAACAGTTTAAATGACATAGCATTTATTTTCTCCTTTTAAGTTTGCTAGAGTTTGTCCATAAAACATCTGAATCCCCTTTAATAAGCAATGTTCTGCCAAGCCTGAACATG----T-----AGCTAAATGTTTCTTTACCCTTATGTTCAGGGCAGGGgaattattttaaaaacacaagaaaattttgaga------aaaatattacaagaa i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22845158 331 + 28711273 GTT-CCTTTTTTGTTGTTCAAACTACGGATGTCTAAGTTTTGTAGGCAAATGTTTTTATTGGCCGTCTGCCCACA-GCAAACTTC----CCTGAACATGTCAAGTGCAAAACGTGGGCAG-GAAGCTCTGTA---------------TCTTTTCTCATGC-TTGGCAACCATTTAAATAACATATCATTAATTTGTTCCTTTTAGGTTTGCTTGAACTTGT-CATAAAACATCTGAACCTCCTCT-ATACAAAATATTCTGCCAAGCCTGAACACGCGTCT-----TACTAAATCTTTACTTAGACTTATGTTCAGGGCAGGAGAACAATTTTCAAA---------AGTTTTGAG-------AAAATACTACAAACA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22111114 349 - 122082543 CTCATTCTTTTCATTGTCTCAGTTATGGGTCTCTTAAT-----------------TCATTGCTCCTCTGCCAGCACACTAACCGTAGGCTCCAAACACAATGGGTATAAGAGGTGTGTTGGGAAGATTTGTGATTTGTTGTTTTCTTTTTTAAATCATGG-TTGGCGTCAGGTCAGATAATGTAGCATTTATTTGATTCTTGTAGGGTTGCTAGAACTTGTCCATAAAACATCTGAACCTCCTGTTATAAACAGTGTTC-----AGCCTGAACATG----CTCATGAGAAAAATCCCTGTTTATACTTATGTCTGGAAGAGAGAAACAATTTTCAAAATACAAGAAGAGCATGTCAGTGCCCAACAT-CCACAATAG i mm10.chr11 I 253 I 109 e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1190779.000000 s hg38.chr17_JH159148v1_alt 10299 291 + 88070 ------------CCTGCCTCTCcaaattggcat-----------tttcttacttctgctttggatcttta-aaaaat-taattgaaatgaaacattatgcttgtaaagttgaagtcccc----------------tcttc-agtcttatttcccttttttcatctcagatataacttc--tatcataattttattgtatattctcccagtcactgttaatttatataaaa-atata---aacatcttatatttataaagtatttaaacaagacctagtatgaaggattgcagatttaagaatttatgtatgtgatgtaaaattatgcaa-tttacttttt s gorGor5.CYUI01015385v1 4072986 291 + 4267968 ------------CCTGCCTCCCcaaattggcat-----------tttcttacttctgctttggatcttta-aaaaat-taattgaaatgaaacattatgtttgtaaagttgaagttccc----------------tcttc-agtctcatttcccttttttcatctcggatataacttc--tgtcataattttattgtatattctcccagtcactgttaatttatataaaa-atata---aacatcttatatttatagagtatttaaacaagatctagtatgaaggattgcagatttaagaatttatgtatgtgatgtaaaattatgcaa-tttacttttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2053449 289 - 2193130 ------------cctgcctccccaaattggcat-----------tttcttacttctgctttgaatcttta-taaaat-taattgaaatgaaacattatacttgtaaagttgaagtcccc----------------tcttc-agtctcatttcccttttttcatctcggatataacttc--tgtcataattttattgtatattctcccagtcac--ttgatttatataaaa-atata---aacatcttatatttataaagtatttaaacaagatctaatatgaaggattgcagatttaagaattttcatatgtgatgtaaaattatacaa-tttacttttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30129942 302 - 77216781 ------------cctgcctc-ccagattggcat-----------tttcttacttctgctttggatcttt--aaatat-taattgaaatgaaacattagacttgtaaagttgaagtcccctttgtaccc------ctcttc-agtctcatttcccttttttcatctcagatatcacttc--tatcataactttattgtatatcctcccagtaactgttaatttatataaaa-atataaacaacatctcgcatttataaagtatttaaacaagatcaaatatgaaggattgcagacttaagaatttacatatgagatgtaaaattatgcaa-tttacttttt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28042795 302 - 80997621 ------------cctgcctc-ccagattggcat-----------tttcttacttctgctttggatcttt--aaatat-taattgaaatgaaacattagacttgtaaagttgaagtcccctttgtaccc------ctcttc-agtctcatttcccttttttcatctcagatatcacttc--tatcataactttattgtatatcctcccagtaactgttaatttatataaaa-atataaacaacatctcgcatttataaagtatttaaacaagatcaaatatgaaggattgcagacttaagaatttacatatgagatgtaaaattatgcaa-tttacttttt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2099400 301 + 10377808 ------------cctgcctc-ccagattggcat-----------tttcttacttctgctttggatcttt--aaatat-taattgaaatgaaacattagacttgtaaagttgaagtcccctttgtaccc------ctcttc-agtctcatttcccttttttcatctcagatatcacttc--tatcataactttattgtatatcctcccagtcactgttaattgatataaaa-atataaacaacatctcgtatttataaagtatttaaacaagaccaaatatgaaggattgcagatttaagaatttacatatgagatgtaaaattatgcaa-tttac-tttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1984771 302 - 8458610 ------------cctgcctc-ccagattggcat-----------tttcttacttctgctttggatcttt--aaatat-taattgaaatgaaacattagacttgtaaagttgaagtcccccttgtaccc------ctcttc-agcctcatttcccttttttcatctcagatatcacttc--tatcgtaactttattgtatatcctcccagtaactgttaatttatataaaa-atataaacaacatctcgtatttataaagtatttaaacaagaccaaatatgaaggattgcagacttaagaatttacatatgagatgtaaaattatgcaa-tttacttttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64929093 303 + 75148670 ------------cctgcctc-ccagattggcat-----------tttcttacttctgctttggatcttta-aaaaat-taattgaaatgaaacattagacttgtaaagttgaagtcccctttgtaccc------ctcttc-agcctcatttcccttttttcatctcgaatatcacttc--tatcataactttattgtatatcctccctgtcactgttaatttataTAAAA-ATATAAACAACATCTCGCATTTATAAAGTATTTAAAGAAGATCAAATATGAAGGATTGCAGACTTAAGAATTTACATATGAGATGTAAAATTATGCAA-TTTACttttt i chlSab2.chr16 C 0 I 1467 s manLeu1.NW_012106252v1 2169042 301 + 4244037 ------------cttgcctc-ccagattggcat-----------tttcttacttctgctttggatcttta-aaaaat-taattgaaatgaaacattagacttgtaaagttgaagtcccctttgtaccc------ctcttc-agcctcatttcccttttttcatctcgaatatcacttc--tatcataactttattgtgtatcctcc--gtcactgttaatttataTAAAA-ATATAAACAACATTTCGCATTTATAAAGTATTTAAACAAGATCAAATATGAAGGATTGCAGACTTAAGAATTTACATATGAGATGTAAAATTATGCAA-TTTACTTTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2192060 301 + 4569836 ------------cctgcctc-ccagattggcat-----------tttcttacttctgctttggatcttta-aaaaat-taattgaaatgaaacattagacttgtaaagttgaagtcccctttgtaccc------ttcttc-agcctcatttcccttttttcatctcggatatcacttc--tatcataactttattgtgtatcctcccagtcactgttaatttatataaaa-atata---aacatctcgtatttataaagtatttaaacaagatcaaatatgaaggattgtagatttaagaatttacatgtgagatgtaaaattatgcaattttacttttt i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22845489 268 + 28711273 ------------CCAAT----CAGAATGGACAT-----------TTTCTTATATCTGCTTCGGATCTTA---------TAATTGAAACAAAACATTA--TTCATAAAGTT---ATCCCATTTGTACT----------------TCCCAAGTCCTTTTTCCCGTCTTAAATACAACCTATGTATCATGGTCTTATT-------------GTCACTGTTAATTTATGTAAAATACATAAATAATATATGATATATAGAAAGTATGTAAATGATACCTAGTATTAGAGCCTGAATATTTAAGAATTTACCTGTATAATGTCAAATTATGTAA-TTTATTTTT- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22111572 329 - 122082543 cctccctccctccctccctc-ctttctttccttccttccCTTTCTTTTTAACATCTGCTTTGGATCTTTACAGAAATGTAACTGAAATAAAATGTTG--TCAGTGGTGGTGATGTCTCCTTTGTATCCTCTCTGCTCTTCTCATGTTAGCTGGCTTCTTTC--CTCAGATCCAACCCC--TCCCAAGATTTCATTGTGCATAGTTCTTGCCACTGTT-ATTTATCCAAAT-TTGGAGACAATCTGCACTATCCATGACGTGTTTAAATAAAGTTTAGTGC-AGGGCTTACAAGCTTCAAGATTCATAGATGCCACATAATGTGTCACAT-GTTCATTTTT i mm10.chr11 I 109 C 0 e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=139367.000000 s hg38.chr17_JH159148v1_alt 10590 34 + 88070 aaatttcattattgcttttaagaactatgcattt s gorGor5.CYUI01015385v1 4073277 34 + 4267968 aaatttcattattgcttttaagaactatgcattt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2053738 34 - 2193130 aaatttcattattgcttttaagaactatgcattt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30130244 34 - 77216781 aaatttcattattgcttttaagaactgtgcattt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28043097 34 - 80997621 aaatttcattattgcttttaagaactgtacattt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2099701 34 + 10377808 aaatttcattattgcttttaagaactgtgcattt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1985073 34 - 8458610 aaatttcattattgcttttaagaactgtgcattt i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2169343 34 + 4244037 AAATTTCATTATTGCTTTTAAGAACTGTGCATTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2192361 34 + 4569836 aaatttcattattgcttttaagaactgcgcattt i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22845757 33 + 28711273 -AATTTCATTATTGCTTTTAAGAGATATACATTT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22111901 31 - 122082543 --GTCTC-CAATCACCTTACAGAGCTATGCATTT i mm10.chr11 C 0 I 531 e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e chlSab2.chr16 64929396 1467 + 75148670 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1053860.000000 s hg38.chr17_JH159148v1_alt 10624 297 + 88070 tgatacatggacctgtttcattatattagttacctattgttgcat--aacaattatctcaaaacttagtggctga-aacaacaaa--gtttattatctcactgtttctgtgggttagaaaactagatgtggcttagctagatacctacag-cttggggtcttttatgagatggttggtgaggtgttggctggggctgcggtcatctcatggctcaactagagaaggattcacttccaagctcatttatgtggacactggaaggccactggttcacaccaactgttagccagagatatcagttc s gorGor5.CYUI01015385v1 4073311 297 + 4267968 tgatacatggacctgtttcattatattagttacctattgtcgcat--aacaattatctcaaaacttagtggctga-aacaacaaa--gtttattatctcactgtttctgtgggttagaaaactagatgtggcttagctagatacctacag-cttggggtcttttatgagatggttggtgaggtattggctggggctgcggtcgtctcatggctcaactagggaaggattcacttccaagctcatttatgtggacactggaaggccactggttcacaccaactgttagccagagatatcagttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2053772 298 - 2193130 tgatacatggacctgtttcattatattcgttacctattgttgcat--aacaattatctcaaaacttagtggccga-agcaacaaa-tgtttattatctcattgtttctgtgggttagaaaactagatgttgcttagctagatacctacag-cttggggtcttttatgagatggttggtgaggtattggctggggctgcggtcatctcatggctcaactagggaaggattcacttccaagctcatttatgtggacgctggaagcccactggttcgcaccaactgttagccagagatatcagttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30130278 298 - 77216781 tgatacatggacctgtttcattatattagttatctattgctgcgt--aacagttatctcaaaacttagtggctga-aacaacaaa-tgtttattatctcactgtttctgtgggttagaaaactaggtgtggcttagctagatacctctag-cttggagtcttttattagatggttggtgaggtgttggctggggctgctgtcatctcatggctcaactagggaaggattcactgccaagctcatttatgtaggcactggaaggccactggtttgcaccaattgttagccagagatatcagttc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28043131 298 - 80997621 tgatacatggacctgtttcattatattagttatctattgctgcgt--aacagttatctcaaaacttagtggctga-aacaacaaa-tgtttattatctcactgtttctgtgggttagaaaactaggtgtggcttagctagatacctctag-cttggagtcttttattagatggttggtgaggtgttggctggggctgctgtcatctcatggctcaactagggaaggattcactgccaagctcatttatgtaggcactggaaggccactggtttgcaccaattgttagccagagatatcagttc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2099735 298 + 10377808 tgatacatggacctgtttcattatattcgttatctattgctgcat--aacagttatctcaaaacttagtggctga-aacaacaaa-tgtttattatctcactgtttctgtgggttagaaaactaggtgtggcttagctagatacctctag-cttggagtcttttattagatggttggtgaggtgttggctggggctgctgtcatctcatggctcaactagggaaggattcactgccaagctcatttatgtaggcactggaaggccactggtttgcaccaattgttagccagagatatcagttc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1985107 298 - 8458610 tgatacatggacctgtttcattatattagttatctattgctgcgc--aacagttatctcaaaacttagtggctga-aacaacaaa-tgtttattatctcactgtttctgtgggttagaaaactaggtgtggcttagctagatacctctag-cttggagtcttttattagatggttggtgaggtgttggctggggctgctgtcatctcatggctcaactagggaaggattcactgccaagctcacttatgtaggcactggaaggccactggtttgcaccaattgttagccagagatatcagttc i cerAty1.NW_012006043v1 C 0 I 848 s manLeu1.NW_012106252v1 2169377 298 + 4244037 TGATACATGGACCTGTTTCATtatattagttatctattgctgcat--aacagttatctcaaaacttagtggctga-aacaacaaa-tgtttattatctcactgtttctgtgggttagaaaactaggtgtggcttagctagatacctctag-cttggagtcttttattagatggttggtgaggtgttggctggggctgctgtcatctcatggctcaactagggaaggattcactgccaagctcatttatgtaggcactggaaggccactggtttgcaccaattgttagccagagatatcagttc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2192395 287 + 4569836 tgatacatggacctgtttcattatattagttatctattgctgcgt--aacagttatatcaaaacttagtggctga-aacaacaaa-tgtttattatctcactgtttctgtgggttagaaaactaggtgtggcttagctagatacctctagacttggagtcttttatt------------aggtgttggctggggctgcggtcatctcatggctcaactagggaaggattcactgccaagctcatttatgtaggcactggaaggccactggtttgcaccaactgttagccagagatatcagttc i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22845790 289 + 28711273 TGATACTCAAATATCTTTTATtatgttagttatctatcactgcataaaaaaattacct-aaaacttagtggctgacaatgacagacccttttttatctcactgtttctgtgggttagaaatgtaggtgtggctt---------ccgttag-ctcagggtctcttgtgagatgactgttgaagttttggctggggcggaagtcacctcatgacttggctggggaaggatttacttctaagctca---atgtagccaccggcaggccactggttcttgctagctgttagccagtgatgttatgcc i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22111932 531 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e chlSab2.chr16 64929396 1467 + 75148670 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=232553.000000 s hg38.chr17_JH159148v1_alt 10921 84 + 88070 attgcctcatgggcttctccatactctggctgattgtcctcatagcacagcatctggattctcccagaggaagcgaagagaaag s gorGor5.CYUI01015385v1 4073608 84 + 4267968 attgcctcatgggcttctccatactctggctgattgtcctcatagcacagcatctggattctcccagaggaagcgaagagaAag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2054070 84 - 2193130 attgcctcatgggcttctccatactctgactgattgtcctcatggcacagcatctggattctcccagaggaagtgaagagaAag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30130576 84 - 77216781 ctttcctcatgggcttctccatactctggctgattgtcctcatggcacagcatctggattctcccagaggaagccaagagaaag i rheMac8.chr16 C 0 I 824 s macFas5.chr16 28043429 84 - 80997621 ctttcctcatgggcttctccatactctggctgattgtcctcatggcacagcatctggattctcccagaggaagccaagagaaag i macFas5.chr16 C 0 I 823 s macNem1.NW_012014910v1 2100033 84 + 10377808 ctttcctcatgggcttctccatactctggctgattgtcctcatggcacagcatctggattctcccagaggaagccaagagaaag i macNem1.NW_012014910v1 C 0 I 822 s manLeu1.NW_012106252v1 2169675 84 + 4244037 ctttcctcatgggcttctccatactctggctgattgtcctcatggcacagcatctggattctcccagaggaagcgaagagaaag i manLeu1.NW_012106252v1 C 0 I 823 s colAng1.NW_012122154v1 2192682 84 + 4569836 cttgcctcatgggcttctccatactctggctgatggtcctcatggcacagcatctggattctcccagaggaagcgaagagaaag i colAng1.NW_012122154v1 C 0 I 828 s otoGar3.GL873537 22846079 82 + 28711273 cctgctgcatgggcttctccct-ttcttactgatagtccttaggg-aaagaagctgaattctcccagagtcagtgggcagtggg i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22111932 531 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=600.000000 s hg38.chr17_JH159148v1_alt 11005 1 + 88070 g s gorGor5.CYUI01015385v1 4073692 1 + 4267968 g i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2054154 1 - 2193130 g i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22846161 1 + 28711273 g i otoGar3.GL873537 C 0 I 927 e mm10.chr11 22111932 531 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1047633.000000 s hg38.chr17_JH159148v1_alt 11006 4101 + 88070 tgagacttgaacaatgagaacacttggacacaggaaggggaacatcacataccagggcctggtatgttg----------ggggagggatagcgttaggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggcacgtgtatacatatgtaacaaacctgcgcattgtgcacatgtaccctagaacttaaagtataaAAAATAGatatataatatataaaatatatattataaaatatatatatataaagtataaaatatatatatatata--atatatatatataagtcacagtccctttacagcctaacctaatgatatggtttgactgtgtcctcacccaaatctcatcttgaagtgtaactcccacaattcccatgtgtcatgggaggaaaccagtgggaggtgattgaattatgagggtgggtctttcctacactgttctcgtgatagtgaatgagtctcacgagatctgatgtttttaaaaaggggagtttccctgcactagctctcttctcttgtctgccaccatgtgagacatgcctctgttcaagctggcaatttgtttgtatatataatttttagaaaaaatttgtggttctcctgtgaatcttcttggagtttactctattagacaaaagttactaccacagatcatctagagataaacacttggacccctgatgtaatagctgaggacaatgcccttaagtttcctagaagcctctttgacttatccgagagtgtctgtgaggttctcacttaatatttttttttttttttttttttttggagacagagcctcactctgtcacccaggctggagtgcagtggcggcgaccttggctcactgcaacctccgcctccctgtttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccacaaccatgcccggctaatttttgtattttttagtagataggggatttcaccatattggccaggctggtctcgatctcctgaccttgtgat-cacccgcctcggcctctcaaagtgctgggattacaggcttgagccattgcgcccggcctcgcttaatatctttagaggggcttttgtatgTAGCTGTTCCCCATTTTTCATTTTTGAAATGAAAATAATTTTCTAATTTTTGACTTTCTCAGATCTT---AAAAAATCTTATAGCCACACGTTAGCTTTATCTTTAGGGCATGATTTCTGGTATATCTGAAtttctctggcattgtcttcaatttgatatttgcttagaagtcatttttaaactttagcattatttgccattggagaggctgagaattttcaaaacaaacaatactgtccaggatccttttttttttttttaatcagcccttctctcaatttatctttctcttctcacattttattatagtcagcaagaagaaatcaaagaacaccttcaagactttagttggaaatttccttagttagatcactcagttcaccaggaacctttctacttttgcctcaaaactgcggatgacagagtactttctgccactgcatagcaagaattttcctttctccagtttccaatatgctcgtggattctgtgggtcaggaattcagccagtgcacagcagagagagcttgtctacaatctgagatgtcttggactttggttggaaatatccaaatggctatgggctagaatcacctggaggcttTCTATGTAGGGACAAGTTTCCCCAAATCTAAGAATACAATTTTTTTTCCTCTGGGGTTTTAAATATATCAGTTTTGCAACAATTCCTGTCTTTGGGAAGGAAACATCCTTTCCTTATTACTGTATATGGTATTCCCTTTAGCTCTGAAGGATGGTTTGGCAGAAAGTTGTTAACTAAGTGTAATAAATCTTATGGAAAGAAATACTCTGGTTAGTTTCTCATCTggttccatttttgtgataatgaggatcaggaaattattctggtaatgagtgactgggatggaggaaggggaaaactcatggctggtgaagaggtcaacgaactgagagatcaagatgtttgatgaattatccttatggaagttgaattcact------aaaaaaaagagacaggcctagaggagaaaagaaagacagtgacccacaaataaatgggtggaattgcctggaaactgatgaaaacagccaatgggaaggataatggCAGTTAAATCGGGTGGTGTAAACTTTGAAAACAACTAAAGTCAAGAATGGCTTTGGTAATGGCAAAACCACTCTGAGATGTAGGTTTCCTACTCTGACGGGTACCTTGGTTAAAATTCAGGACAATGGTCAGAACTTGTATGATCATTGCTTTCATAAGTC------tttttttttttttgagacagagtctcactctgtcgcccaggctgaagtgcaatggtgcaatcctggctcgctgcagcctccgcctcctgggttcaagcaattctgcagccgcagcctcagcctcccaagtagctgggattacaagtgcatgccaccacaactggctaatttttgtatttttactagagatggggtttcaccatgttagccaaggctggtctcaaactcctgacctcaagtggtctgcctgcctcagcctcccaaagtgctggg-ttacaggcatgagacaTGCCTTCATAAATCCTTAATGACTTaaggaatcttgcatatcagttgatcaaattacccatttatttacgcaagcattctgtgacatccctattagttttttt--gtctgtgttttcctgtctccagagaatagggcacacgacttcccaagaaaacatgtgtctctctagtcagctccaggaatgacttttcacttatttttgcttaaatcggtcgtcttgtttcttgaccctataaggccacacaggacacatctaatccatcttct--------------------------acattaagtctttcccttcccccaaagatcttcttttctctgggataattatcactggataccatcatttttcattatgtgacttgaattccagtcctattctcaggatagttgctctacttgcaagactttccaattattcaatattcctttaaaaggggcatgatcagagcctaactcacgatcaaattatctgttagccagtacaggatagggaatagccatcctcttcttttgAGTATAGTCCATATTTTCCAGGTCATGTCTGCCTGATGATATAATTAAATACTAttcttttgtttgtttgtttgtttttgagacagagtctcgctctgtcacccatgctggagtgcagtggcgcgatcaccactcactgcaaattccgcctccggggttcacgccattctcttgcctcagcctcctgagtagctgggactacaggtgcccaccaccacggccggctaattttttgtatttttagtagagacggggtttctccgtgttagccaggatggtcttgatctcctgaactcatgatctgcctgcctcagcctccaaagtgctgggattacagAGATCTCCGCCCTGAAGAGGAAATGTGCTGGTATTTGAATGTCTAAGTCCCTATTTAGTGAGGTGGCATTTGTCCTCCTGTAGGGGCAACCTCTACCACTGCTCAAAGGTTTTCTGGTCCCTGTATTGATATCCTTTGTTCCTGC------ttttttttttgaccgaattttgctcttgtcacccagcctggagtgcaatggtgcaatctcggctaattgcaacctccccctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggactacaggcatccaccaccatgcccagctaatttttgtatttgcagtagagacagggtttcaccatgttggccaggctggtctcgaacttctgacctcaggtgatcctgcccgcctcagccttccaaagtgctgggattacaggcatgaacccctgcgcccagTATGTTCCTGCTTTTGAATGCCTGTTTCTAAGTTCAGATTTCTACTCCAGCCATAATGATGTCCTGACCGCCACTGCCTGGAAGAGGGAATTCTTCAGGTTCAGGTTTAATATTAGCTTCAGAAGTATGGCTTGTTAGTTTGAGTCCAAGTTAACAATACTGTCTCCTCCTAGCAATCTCTA s gorGor5.CYUI01015385v1 4073693 4100 + 4267968 tgagacttgaacaatgagaacacttggacacaggaaggggaacatcacataccagggcctggtatgtgg----------ggggagggatagcgttaggagatatacctaatgtaaatgacgagttaatgggtgcagcacacaaacatggcacgtgtatacatatgtaacaaacctgcacatagtgcacacgtaccctaaaacttaaagtat--aaAatatatatataatatat-aaatatatattacaaa--atatatatataaagtataaaatatatatatatataatatatatatatataAGTCACAGTCCCTTTACAGCCTAACCTAAtgatatggtttgactgtgtcctcacccaaatctcatcttgaagtgtaactcccacaattcccatgtatcatgggaggaaaccagtgggaggtgattgaattatggtggtgggtctttcctacactgttctcgtgatagtgaatgggtctcacgagatctgatggttttaaaaaggggagtttccctgcactagctctcttctcttgtctgccaccatgtgagacatgcctctgttcaagctggcaatttgtttgtatatataatttttagaaaaaaattgtggttctcctgtgaatcttcctggagtttactctattagacaaaagttactaccacagatcatccagagataaacacttggacccctgatgtaatagctgaggacaatgcccttaagtttcctagaagcctctttgatttatctgagagtgtctgtgaggttctcacttaata---tcttttttttttttttttttggagacagagtctcactctgtcacccaggctggagtgcagtggcggcgaccttggctcactgcaacctccgcctcctggtttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccaccaccatgcccggctaatttttgtattttttagtagataggggatttcacc-tattggccaggctggtctcgatctcctgaccttgtgatccacccacctcggcctttcaaagtgctgggattacaggcttgagccactgcgcccagcctcgcttaatatctttagaggggcttttgtatgtagctgttcccaatttttcatttttgaaatgaaaattattttctaatttttgactttctcagatcttaacaaaaaatcttatagccacacgttagctttatctttagggcatgatttctggtatatctgaatttctctggcattgtcttcaatttgatatttgcttagaagtcatttttaaactttagcattatttgccattggagaggctgagaagtttcaaaacaaacaatactgtccaggatcc-tttttttttttttaatcagcccttctctcaatttatctttctcttctcacattttattatagtcagcaagaagaaatcaaagaacaccttcaagactttagttggaaatttccttagttagatcactcagttcaccaggaacctttctacttttgcctcaaaactgcgggtgacagagtactttctgccactgcatagcaagaattttcctttctccagtttccaatatgctcgtggattctgtgggtcaggaattcagccagtgcacagcagagagagcttgtctacaatctgagatgtcttggactttggttggaaatatccaaatggctatgggctagaatcacctggaggcttTCTATGTAGGGACAAGTTTTCCCAAATCTAAGAATACATATTTTTTTCCCCTGGGGTTTTAAATATATCAGTTTTGCAACAATTCCTGTCTTTGGGAAGGAAACATCCTTTCCTTATTACTGTATATGGTATTCCCTTTAGCTCTGAAGGATGGTTTGGCAGAAAGTTGTTAACTAAGTGTAATAAATCTTATGGAAAGAAATACTCTGGTTAGTTTCTCTTCTggttccatttttgtgatgatgaggatcaggaaattattctggtaatgagtgactgggatggaggaaggggaaaactcac-gctggtgaagaggtcaaggaactgagagatcaagatgttggatgaattatccttatggaagttgaattcact------aaaaaaaagagacaggcctagaggagaaaagaaagacagtgacccaCAAATAAATGGATGGAATTGCCTGGAAACTGATGAAAACAGCCAATGGGAAGGATAATGGCAGTTAAATCGGGTGGTGTAAACTTTGAAAACAACTAAAGTCAAGAATGGCTTTGGTAATGGCAAAACCACTCTGAGATGTAGGTTTCCTACTCTGACGGGTACCTTGGTTAAAATTCAGGACAATGGTCAGAACTTGTATGATCATTGTTTTCATAAGTC----tttttttttttttttgagacagagtctcactctgttgcccaggctgaagtgcaatggtgcaatcttggctcactgcagcctccgcctcctggattcaagcaattctgcagccgcagcctcagcctcccaagtagctgggattacaagtgcatgccaccacacctcgctaatttttgtatttttactagagatggggtttcaccatgttagccaaggctggtctcaaactcctgacctcaagtggtctgcctgcctcagcctcccaaagtgctggg-ttacaggcatgagacaTGCCTTCATAAATCATTAATGACTTaaggaatcttgcatatcagttgatcaaattacccatttatttacgcaagcattctgtgacatccctattagtttttttgagtctgtgttttcctgtctccagagaatagggcacacgacttcccaagaaaacatgtgtctctctagtcagctccagaaatgacttttcacttatttttgcttaaatcggtcgtcttgtttcttgaccctataaggccacacaggacacatctaatccatcttct--------------------------acattaagtctttcccttcccccaaagatcttcttttctctgggataattatcactggataccatcatttttcattatgtgacttgaattccagtcctattctcaggatagttgctctacttggaagactttccaattattcaatattcctttaaaaggggcatgatcagagcctaactcacgatcaaattatctgttagccagtacaggatagggaatagccatcctcttctttTGAGTATAGTCCATATTTTCCAGGTCATGTCTGCCTGATGATATAATTAAGTACTAttcttttgtttgtttgtttgtttttgagacagagtctcgctctgtcacccatgctggagtgcagtggcgccatcaccactcactgcaagttctgcctcctgagttcatgccattctcttgcctcagcctcccgagtagctgggactacaggtgcccaccaccacggctggctaattttttgtatttttagtagagacggggtttctccgtgttagccaggatggtctcgatctcctgaactcatgatctgcctgcctcagcctccaaagtgctgggattacagAGATCTCCGCCCTGAAGAGGAAATGTGCTGGTATTTGAATGTCTAAGTCCCTATTTAGTGAGGTGGCATTTGTCCTCCTGTAGGGGCTACCTCTACCACTGCTCAAAGGTTTTCTGGTCCCTGTATTGATATCCTCTGTTCCTGC------ttttttttttgactgaattttgctcttgtcacccagcctggagtgcaatggtgcaatctcagctaattgcaacctccccctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcatccaccaccatgcccggctaatttttgtatttgcagtagatacagggtttcaccatgttggccaggctggtctcgaacttctgacctcaggtgatcctgcccgcctcagccttccaaagtgctgggattgcaggcatgaacccctgcgcccggTATGTTCCTGCTTTTGAATGCCTGTTTCTAAGTTCAGATTTCTACTCCAGCCATAATGATGTCCTGACCGCCACTGCCTGGAAGAGGGAATTCTTCAGGTTCAGGTTTAATATCAGCTTCAGAAGTATGGCTTGTTAGTTTGAGTCCAAGTTAACAATACTGTCTCCTCCTAGCAATCTCTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2054155 4054 - 2193130 tgagaattgaacaatgagaacacttggacacaggaaggggaacatcacacaccagggcctgtcatggggtggggggagaggggagggatagcgttaggagatatacctaatgtaaatgatgagttaatgggtacagcacaccaacatggcacgtgtatacatatgtaacaaacctgcatgttgtgcacatgtaccctagagcttaaagtat---------------------------------------------------------------------------a--ataTATATATATATGTCACAGTCCCTTTACAGCCTAACCTTAtgacatggtttggctgtgtcctcacccaaatttcatcttgaagtgtaactcccacaattcccatgtgtcatgggaggaaaccagtgggaggtgattgaattatgggggtgggtttttcctgcactgttctcatgatagtgaatgagtctcacgagatctgatggttttaaaaaggggagtttccctgaaccagctctcttctcttgtctgccaccatgtgagacatgcctctgttcaagctggcaatttgtttgtatatataatttttagaaaaaattcgtggttctcctgtgaatc-tcttggagtttactctattagacaaaagttactaccacaaatcatctagagataaacacctggacccctgatgtaatagctgaggacaatgcccttaagtttcccagaagcgtctttgatttatctgagg----ctgtgaggttctcacttaatatctttaTTATTATTAttttttttggagacagagtcttgctctgtcacccaggctggagtgcagtggcggcgacctcggctcactgcaacctccacctcccggtttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcccggctaatttttgta-tttttagtagagaggggatttcaccatattggccaggctggtctcgatctcctgatcttgtgatccacccgcctcggcctctcaaagtgctgggattacaggtgtgagccactgtgcccggccTCACTTAATATCTTTAGAGGGGCTTTTGTATGTACTTGTTCCCAATTTTTCATTCTTGAAATGAAAATTGCTTTCTAatttttgactttctcagatcttaacaaaaaatcttatagtcacacgttagctttatctttagggcatgatttctggtatatctgaa---atctggtg-tgtcttcaatttgatatttgcttagaagtcatttttaaattttagcattatttgccattggagaggctgagaattttcaaaacaaacaatactgtcc----------tttttttttttaatcagcccttctctcaatttatctttctctgctcacattttattataatcagcaagaagaaaccaaagaacaccttcaagactttagttggaaatttccttagttagatcactcagttcatcaggaacttttctacttttgcctcaaaactgcgggtgacagagtactttccgccactgcatagcaagaattttcctttctccagtttccaatatgcttgtgtattctgtgggtcaggaattcagacagtgtacagcagggagagcttgtctacaatctgagatgtcttggacttcagttggaaatacccaaatggctatgggctataatcacctggaggcttTCTATGTAGGGACAAGTTTCCCCAAATCTAAGAATACA-TTTTTTTTCCTCTGGGGTTTTAAATATATCAGTTTTGCAATAATTCCTATCTTTGAGAAGGAAACATCCTTTCCTTATTACTGTATATGGTATTCCCTTTAGCTCTGAAGGATGGTTTGGCAGGAAGTTGTTGACTAAGTGTAATAAATCTTATGGAAAGAAATACTCCGGTTAGTTTCTCATCTggttccatttttgtgatgatgaggatcaggaaattattctggtaatgagtgactgggatggaggaaggggaaaactcatggctggagaagaggtcaaggaaacaagagatcaagatgttggatgaattatccttatggaagttgaattcactaaaaaaaaaaaaaagagacaggcctagaggagaaaagaaagacagtgacccacaaacaaaTGCGTGGAATTGCCTGGAAACTGATGAAAACAGCCAATGGGAAGGATAATGGCAGTTAAATCGGATGGTGTAAACTTTGAAAACAACTAAAGTCAAGAATGGCTTTGGTAGTGGCAAAACCACTTTGAGACGTAGGTTTCCTACTTTGACAGGTACCTTGGTTAAAATTCAGGACAATGGCTAGAACTTGTATGATCATTGCTTTCATAAGTCCtttttttttttttcttttgagacagagtctcactctgtcgcccaggctggagtgcaatggtgcaatcttggcttgctgcagcctccgcctcctgggttcaagcaattctgcagccgcagcctcagcctcccaagtagctgggattacaagcgcatgccaccacacctggctaatttttgtatttttactagagatgggatttcaccatgttggccaaggctggtctcaaacacctgacctcaagtggtctgcccgcctcagcctcccaaagtgctgggattgcaggcgtgagacacACCTTCATAAATCCTTAATGACTTAAGGAATCTTGCATATCAGTTGATCAAATTACCCATTTATTTACGCAACCATTCCGTGACATCCCTATTAGCTTTTTTGAGTCTGTGTTTTCCTGTCTCCAGAGAATAGGGCACCCGACTTCCCAAGAAAACATGTGTCTCTCTAGTCAGCTCCAGGAATGACTTTTCACTTATTTTTGCCTAAATCGGtggtcttgtttcttgaccctataaggccacacaggacacatttaatccatcttctgcagacaggtattgctatgtttacagacgctaagtctttcccttcccccaaaggtcttcttttctctgggataattatcactggataccatcatttttcattatgtgacttgaattccagtcctattctcaggatagttgctctacttggaagactttccaattattcaatattcctttaaaaggggcatgatcagagcctaactcatgatcgaattatctgttaaccagtacaggatagggaatagccatcctcttctttTGAGTATAGTCCATATTTTCCAGGTCATGTCTGCCTGATGATATAATTAAATACTAttcttttgtttgtttgtttgtttttgagacagagtctcgctctgtctcccatgctggagtgcagtggcgcgatctcggcttactgcaagttctgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacagctggctaattttttgtatttttagtagagacggggtttccccgtgttagccaggatggtctcgatctcctaaacccatgatctgcccgcctcagcctccaaagtgctgggatt--agagATCTCCGCCCTGAAGAGGAAATGTGCTGGTATTTGAATGTCTAAGTCCCTATTTAGTGAGGTGGCATTTGTCCTCCTGTAGGGGCTACCTCTACCACTGCTCAAAGGTTTTCTGGTCCCTGTATCGATATCCTCTGTTCCTGCttttttttttttttttgacagaattttgctcttgttgcccagcctggagtgcaatggtgcgatcttggctcattgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggaccgtaggcatccaccaccatgcccggctaatttttgtatttgcagtagagacagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatcctgcccacctcagcctcccaaagtgctgggattacagatgtgaacctccgcgcccggTATGTTCCTGCTTTTGAATGCCTGTTTCTAAGTTCAGATTTCTACTGCAGCCATAATGATGTCCTGACTGCCACTGCCTGGAAGAGGGAGTTCTTCAGGTTCAGGTTTAATATCAACTT----------GCTCGTTAGTTTGAGTCCAAGTTAACAATACTGTCTCCTCCTAGCAACCTCCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22111932 531 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=352391.000000 s hg38.chr17_JH159148v1_alt 15107 1074 + 88070 GATGCTCTGAGCATCTGCAGAAAAGACTGTCCAGTGAGTCTGCCCCAAACTGTCTGCCTATCTGCCCCTCTAGCCCATCTCTTATCCAGGGCCTCAGTTTGAATTTAGGATCAAGTTCTTATTATTATTGGATAAAGTAAGACAGTGACATTAGAATAAAACATGTCTTGGCAAATTGTCACTGAATTGaatccacctttctgcaatgttttcataagctacgatgagagtccttttgaaatgctctgctgaaatccagattcattttgtactgaatttcgtttatcAATG-AATCTAGCAAAAATAAAA-----AGTTATTTTACATGGgttggtctaagtggtaccatgttttatttttt----ggcattcacaaaagatcatctgaaca----------atttattctaaagtctttttctaagat--aagatcaagctgattggtgtatggtttgcagaaacttgaaaaattgggatggtctttgcttgtctc-aacacgttgagtagctcttgttctctaacattcctcaaatatcaatatgtggtttattttcagtctctaactgctctgggacctaatgtgcacagcatgcagtgacatgaatttatttagagaatctaagCATTTGCAAAATTGATTTGTCCTTATCAATGTTTAGTCATTTTTCCAATTCAATTATTTCCTATTGTCTGAAAAGATAGACACCAAATAAGAGTGTTTCTAGCATAACCTTCACAGTCTTTGTGCCATACGCCACCGGGAGATCTCAGATCTTCTCTCAATCCCTGCTCTCAGCCTGAAATAAGGAGGCCAGGTTCCTTTTATAAGCCCAGATTTTCCTTGCCAGATACTGACATATTTACAGTTCATGGATCATGAATTGGATGAAGGGTGGATACAAATGCATC------ATAC-AAAAAA-------------TGCAACATCACACTGAGGAGCTTACTTCATATTAAAC---TTCTTTTAGTGC--TTATAGCTCTCTTTATTCAGATCAAAAGGAATTAAAA-----------------TCTGTCGCTCTTGTTG------------------------------CAAGTTTTCTCATTTCAGTTCAGAAGGAAACATTTCAATTTTTCTTTTGTTATAAAAGTAACCTGTGCTTG s gorGor5.CYUI01015385v1 4077793 1078 + 4267968 GATGCTCTGAGTATCTGCAGAAAAGACTGTCCAGTGAGTCTGCCCCAAACCGTCTGCCTATCTGCCCCTCTAGCCCATCTCTTATCCAGGGCCTCAGTTTGAATTTAGGATCAAGTTCTTATTATTATTGGATAAAGTAAGACGGTGACATTAGAATAAAACATGTCTTGGCAAATTGTCACTGAattgaatccacctttctgcaatcttttcataagctacgatgagagtccttttgaaatgctctgctgaaatccagattcattttgtactgaatttcgtttatcaatg-aatctagcaaaaataaaa-----agttattttacatgggttggtctaagtggtaccatgttttatttttt----ggcattcacaaaagatcatctgaaca----------atttattctaaagtctttttataaggt--aagatcaagctgattggtgtatggtttgcagaaacttgaaaaattgggatggtcttttcttgtctc-aacacgttgagtagctcttgttctctaacattcctcaaatatcaatatgtggtttattttcagtctctaactgctctgggacctaatgtgcacagcatgcagtgacatgaatttatttagagaatctaagCATTTGCAAAATTGATTTGTCCTTATCAATGTTTAGTCATTTTTCCAATTCAATTATTTCCTATTGTCTGAAAAGATAGACACCAAATAAGAGTGTTTCTAGCATAACCTTCACAGTCTTTGTGCCATACGCCACCGGGAGATATCAGATCTTCTCTCAATCCCTGCTCTCAGCCTGAAATAAGGAGGCCAGGTTCCTTTTATAAGCCCAGATTTTCCTTGCCAGATACTGACATATTTACAGTTCATGGATCATGAATTGGATGAAGGGTGGATACAAATGCATC------ATAT-AAAAAA-------------TGCAGCATCACACTGAGGAGCTTACTTCATATTAAAC---TTCTTTTAGTGC--TTATAGCTCTCTTTATTCAGATCAAAAGGAATTAAAATC-------------TCTCTGTCGCTCTTGTTG------------------------------CAAGTTTTCTTATTTCAGTTCAGAAGGAAACATTTCAATTTTTCTTTTGCTATAAAAGTAACCTGTGCTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2058209 1071 - 2193130 GATGCTCTGAGTAGCTGCAGAAAAGACTGTCCAGTGAGTCTGCCCCAAACTGTCTGCCTATCTGCCCCTCTAGCCCATCTCTTATCCAGGGTCTCAGTTTGAATTTAGGATCAAGTGCTTGTTATTATTGGAAAAAGTAAGACGGTGACATTAGAATAAAACATGTCTTGGCAAATTGTCCCTGAatcgaatccacatttccgcaatcttttcataagctatgatgagagtccttttgaaatgctctgctgaaatccagattcattttgtactgaatttcgtttatcaatg-aatctagcaaaaataaaa-----agttattttacatgggttggtctaagtggtaccatgttttatttttt----ggcattcacaaaagatcatctgaaca----------atttattctaaagtctttttctaagat--aagatcaagctgattggtgtatggtttgcagaaacttgaaaaatcgggatggtctttgcttgtctc-agcacggtgagtagctcttgttctccaagattcctcaaatatcaatatgtggtttatttccagtctctaactgctctgggacctaatgtgcgcagcatgcagtgatatgaatttatttagagaatctaagCATTTGCAAAATTGATTTGTCCTTATCAATGTTTAGTCATTTTTCCAATTCAATTATTTCCTATTGTCTGAAAAAATAGACACCAAATAAAAGTATTTCTAGCATAAACTTCACTTTCTTTGTGCCATACGCCACTGGGAGATCTCAGA---TCTCTCAATCCCTGCTCTCAGCCTGAAATAAGGAGGCCAGTTTCCTTTTATAAGCCCGCATTTTCCTTGCCAGATACTGACATGTTTACAGTTCATGGATCGTGAATTGGATGAAGGGTGGATACAAATGCATC------ATATAAAAAAA-------------TGCAGCATCACACTGAGGAGCTTACTTCATATTAAAC---TTTTTTTAGTGC--TTATAGCTCTCTTTATTCAGATCAAAAGGAATTAAAC---------------TCTCTGTCACTCTTGT---------------------------------AAGTTTTCTCATTTTAGTTCAGAAGGAAACATTTCAATTTTTCTTTTGTTATAAAAGTAACCTGTGCTTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s mm10.chr11 22112463 1077 - 122082543 GATGCTCTGAAATCCT--ATACCGGGCAGCCCTGCACCTCTGTGGCAGGCTGCCTGCCTAACTAACCCTCTGACACATTTCCTACCCAGGATTTCAGCTTGAATTTGGGCTTAAATCCTCATTAGCACTGGGTGAAGTAAGACCCTACTA--ACAATGAAACAGGCCTGGGCAAACTGTCAATGGATTCTATCCACACT---------TTTTCCTAAGGCATTAGGAGAAGTCTTTC-AACCACCCTGCAG-AATCCAGGATCATTTC-CACTGAGCTCTGCCTATCGACATAATCTAGCAAAAACAAAACATTGAATGGTTTGAAATGACTTGGTCTAATTGGTGGTATGTTTTGTCTTCTCCAAAACAACCACAAAGAGTCCTTTGAATAAGCCCTCAGGATTTTTTT-----TCTTTTTCTTATTTGAGAGATCGAGCTTA--GAGGTACAGCCTGCAGGAACTTGAACACCTGGTGTAGTGTTTGCTTGTCTTAAACACACCAAGCATCTTTGGTTTTCTAAGGTTTCTCAAAGACCAGCCTGTGG--CACTTCCAGACTCTAACTGCTCCAGATGTAAACATGTGGAGTGT-----------------------GATTCTTTGTGTCTGT-GAGCTGGTTAGTCTTTAG--------------------AACACAGTCTTTCCCCGTCATCTGAAAAGACTGAAGCCATGTCAGTAAGTCTCCAGTCCAGCACATACATTCCTT------TGCTTCAC---------TCTGACCAT-TCTCAATTTCCAGCGTTCCAATGAACCAAGGATTCCAGACTCCCTTTATGAGTCTATATCCACGT----AGGTGTTGATGTGATTAGTGTTTGTGGGTCCCAAGATAGATGATGGGTGGCTACAAATGCATCTTGAAGATAG-AGAAAAATCAGCAATCAATTGCAGTGCCACCCAGACCTTCTCACTACACAGCAAACAAGTATTTTGGGGGCAATTATAGCTGT-TATATCAAAATCAAGAGGAATTAAAATCTGCCATCTCTTTATCTCTGTCTGTGGTGTTTGtgtctgtctgtctgtctgtctgtcATTCCCATTTTTTCCCATTTCAGTTCAGAAAGAAACATTCC-ATTCTTCTTCCCTTATAAAGGTCTCCTGTTCTTG i mm10.chr11 I 531 I 378 e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=307104.000000 s hg38.chr17_JH159148v1_alt 16181 1236 + 88070 AGGGGGAAAACAATGTAGGAAA---AAAAATGGGAAGTCCTAGTTTCCAAACACCCCATCCACATCCCCCTCCCCAGGGACAAACTACTGGTTACTGCTTATTATGCCCTAATCTTGGTTTTCTCTTTCTCTTTACAGATGGTTGGTTACTATTCTCATTAGAAAGACTGAAGAAAAggctgggcacagtggctcatgcttgtaattccagcattttgggaggctgaggcgggtggatcatctaaggtcaggagttcaagaccagcctggcccatgtggtgaaaccctgtctctactaaagatgaaagaaagaaagaaggaaagaaaggaagaaagaaagaaagaaagaaaagaaagaaaagaaagaaagaaagaaaccgggcatggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcggtgagccgagatcgcaccattgcactccagcctgggcaacaggagcgaaactctgtctattaaaaaaaaaaaaaaGACTAAAGAGAAATAAGAGGAGCGTTGATTTCTATATCGCAAGCACAGTACAAGATTATCAGTACAAAGCAATAGGCCTTTTCCTGTTTAATGGCATACTCACTTTGTTTACAACCATTTCATTAAAAAACACATTTTCACCATGTTTTCTGCTGttttgtttttgtttttgtttttgtttttTTCCAACCAAAAAGCATCTGGAGCTTCTTTCATTCTTCTCATGGACTCCTACCATCCCTGTTTAATGACTTGTTCACGAATCTTTCTTCCTAaggctaaacctttgaagttgtagctatgcagttatttttgatctacaaaaatggaaacttcatatggctcaaactCGTATTCTCTACTTGGCCTTTATttttta---tttttttaagtagagatggggtttcaccacgttggccaggctggttttgaactcctgacctcaagtgatctgcctgccttgccctcccaaagtgctgggattacaggcacaagccaccacgcctgaccTACTTGGACTTTTTCAATCAAATCCCAGCCCATAGCTCCTTATAACTCCCTCTGGCATCTTTATAGTATACTGAAAAGTATTTTAAAAGGCCTTAGGATACTAATCACACACAGTAAAGTATTTTAAAAAGAATTAAGTCAACATAAGCCATCTTTTCTCCCAGTGTCTATTAGAATGAAATTTCCCCTGTCATTT s gorGor5.CYUI01015385v1 4078871 1229 + 4267968 AGGGGGAAAACAATGTAGGAAA---AAAAATGGGAAGTACTAGTTTCCAAACATCCCATCCACATCCCCCTCCCCAGGGACAAACTACTGGTTACTGCTTATTATGCCCTAATCTTGGTTTTCTCTTTCTCTTTACAGATGGTTGGTTACTATTCTCATTTGAAAGACTGAAGAAAAggctgggcacagtggctcgtgcttgtaattccagcattttgggaggctgaggcgggtggatcatctaaggtcaggagttcaagaccagcctggcccatgtggtgaaaccctgtctctactaaagatgaaagaaagaaagaaggaaagaaaggaagaaagaaagaaagaaagaaaag-----aaagaaagaaagaaagaaactgggcatggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcggtgagccgagatcgcaccattgcactccagcctgggcaacaggagtgaaactctgtctatt-aaaaaaaaaaaaagactaaagagaaaTAAGAGGAGCGTTGATTTCTATATCGCAAGCACAGTACAAGATTATCAGTACAAAGCAATAGGCCTTTTCCTGTTTAATGGCATACTCACTTTGTTTACAACCATTTCATTAAAAAACACATTTCCACCATGTTTTCTGCTGttttttttgtttgtttgtttttgtttttttCCAACCAAAAAGCATCTGGAGCTTCTTTCATTCTTCTCATGGACTCCTACCATCCCTGTTTAATGACTTGTTCACGAATCTTTCTTCCTAaggctaaacctttgaaattgtagctatgcagttatttttgatctacgaaaacggaaatttcatatggctcaGACTCGTATTCTCTACTTGGCCTTCATttttta----ttttttaagtagagatggggtttcaccacgttggccaggctggttttgaactcctgacctcaagtgatctgcctgccttgccctcccaaagtgctgggattacaggcacgagccaccacgcctgaccTACTTGGCCTTTTTCAATCAAATCCCAGCCCATAGCTCCTTATAACTCCCTCTGGCATCTTTATAGTATACTGAAAAGTATTTTAAAAGGCCTTAGGATACTAATCACACACAGTAAAATATTTTAAAAAGAATTAAGTCAACATAAGCCATCTTTTCTCCCAGTGTCTATTAGAATGAAATTTCCCCTGTCATTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2059280 1195 - 2193130 AGGGGGAAAACAATGTAGGAAAAATAAAAAAGGGAAGTCCTAGTTTCCAAACACCCCATCCACATCCCCCTCCCCAGGGACAAACTATTGATTACTGCTTATTATGCCCTAATCTTGGTTTTCTCTTTCTCTTTACAGATGGTTGGTTACTACTCTCATTAGAAAGACTAAAGAAAAggctgggcgcagtggctcaagcttgtaattccagcactttgggaggctg------------------aggtcaggagttcaagaccagcctgccccatgtgatgaaaccctgtctttactaaaaatgcaagaaaaaa------aaagaaagaaagaaagaaagaaagaaagaaaag-------------aaagaaagaaaccgggcatggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcggtgagccaagattgcaccattgcactccagccttcgcaacaggagcgaaactctat------taaaaaaaaaaaagactaaagaaaaaTAAGAGGAGTGTTGTTTTCTATATCGCGAGCACAGTACAAGATTATCAGTACAAAGCAATAGACCTTTTCCTGTTTAATGGCATACTCACTCTGTTTACAACCATTTCCTTAAAAAACACATTTCCACCATGTTTTCTGCTGttttttttttgttt---ttttttttttttCCCAACCAAAAAGCATCTGGTGCTTCTTTTATTCTTCTCATGGACTCCTACCATCCCTGTTTAATGTCTTGTTCACGAATCTTTCTTCCTAaggctaaacttttgaaattgtagatatgcagttatttttgatctacaaaaatggaaatttcgtatggctcaaactCGTATTCTCTACTTGGCCTTTTTTTTTttttttttttttaagtaaagatggggtttcatcatgttggccaggctggttttgaactcctgacctcaagtgatctgcctgcctcaccctcccaaagtgctgggattacaggcatgagccaccacgcctggccTACTTGGACTTTTTCAATCAAATCCCAGTACACAGCTCTGTAAAAGTCCCTCTGGCATCTTTATAGTATACTGAAAAGTATTTTAAAAGGCCTTAGGATACTAATCACACACAGTAAAGTATTTTAAAAAGAATTAAGTCAACTTAAGCCGTCTTTTCTCCCAGTGTCTATTAGAATGAAATTT-CCCTGTCATTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I e panPan2.chr17 16233418 0 + 83442489 C e panTro5.chr17 16328533 0 + 83181570 C a score=1261472.000000 s hg38.chr17_JH159148v1_alt 17417 1405 + 88070 TTCTGATTGTTTCCCTATCTATTTAATAACTAGGGTACACGTCAGACTTGTCCTGAGAAGTTCCATTCCTGAGGAAAAGCTATGCA-TGATTGTCTTATTTTGGAAATCTCAAATGTGGGATTCGTGTAATGGGCTTTGATAAAGGATGTTAAGGGGCAAAGTTAAGGCAGCCTTGTAAAGGTCAACTTGGAAACTAAATATCAGTAGGGAGTTATCTCAGTGGCTATAAGTTAAGACAACAGAATAAAAACTGATATTTGAGACATAAAAATGGCCC-AAAAGATGGGTGTAATGAGCCCATGAGTCCCCAGTATAACATGAAACTTGCCCATCTGCGTGGTGTACGGCATTTGGTGTTACTCATGTTGGTCTCATCAGTTTGCCCACCTAAATAAATTCATCTTACAAC-AATAGTTCTATAACATCTAGAAGTAAGTTCCCTCCTGTAGCCCACTTCATCAGAAACTTCTTGGCAACACCTGAACCTAGCTGGAACTGGAAAAATATTTGATGGTAGTGATTTCCTGATAAATAGTCTAGAGCTGTTGCAAACAAAATCCAAGGATTGCTCtttttagacacagtcttgctctgtcgcacagtctagagtgcagtggcttgatgttggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctgccgagtagctgagattgcaggtgcgtgtcaccacaccccactaattttttgcatttttaatagagacggggtttcaccacatttgtcaggctggttttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctaggattacaggtgtgagccactgtgcctggTTAAAGGGTTGCTGTTTAAATGAACTATTTGCTTATGCTCTAAGTCAGCATGGATGGGATCCATAGATCTTTCCCGAAGTCTTAAAAATTAGTCTCTTGACTTAGTGGCATGGGAATAGATGTGAAAGAACTTTGTTTTTTTAAAAATATTAATTAATTAATTAAtt----tttgagacaaagtcttgctctttcacccaggctggagtgcagtggcgcgatctcagctcactgcaaactctgcctcccaggttcaagtgattttcgtgcctaagcctcccgagtagctgggaatacaggtgcacactgccaagcctggttaattttgtatttttagtagagacgggttttgccatgttggccaggctggtctcgaactcctgacctcaaatgatcctcctgccttggcctttcaaagtgctgggattacaggtgtgagccactgtgccaggccAAAATGGGAAAAAGCTTTGTAAAATATAAAATATCCTTTAAATTTAAGAGCTTATGAAGGATATACTGCACACATAATCTAGGTCACGAAAGGATATGC s panTro5.chr17 16328533 1409 + 83181570 TTCTGATTGTTTCCCTATCTATTTAATAACTAGGGTACACATCATACTTGTCCTGAGAAGTTCCATTCCTGAGGAAAAACTATGCA-TGATTGTCTTATTTTGGAAATCTCAAATGTGGGATTCGTGTAATGGGCTTTGATAAAGGATGTTAAGGGGCAAAGTTAAGGCAGCCTTGTAAAGGTCAACTTGGAAACTAAATATCAGTAGGGAGTTATCTCAGTGGCTATAAGTTAAGACAACAGAATAAAAACTGATATTTGAGACATAAAAATGGCCC-AAAAGATGGGTGTAATGAGCCCATGAGTCCCCAGTATAACATGAAACTTGCCGATCTGCGTAGTGTACGGCATTTGGTGTTACTCACGTTGGTCTCATCAGTTTGCCCATCTAAATAAATTCATCTTACAAC-AATAGTTCTATAACATCTAGAAGTAAGTTCCCTCCTGTAGCCCACTTCATCAGAAACTTCTTGGCAACACCTGAACCTAGCTGGAACTGGAAAAATATTTGATGGTAGTGATTTCCTGATAAATAGTCCAGAGCTGTTGCAAACAAAATCCAAGGATTGCTCtttttagacagagtcttgctctgtcgcacaggctagagtgcagtggcttgatgttggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctgccgagtagctgagattacaggtgcgtgtcaccacaccccactaattttttgcatttttaatagagacggggtttcaccacattggtcaggctggttttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctaggattacaggtgtgagccactgtgcctggTTAAAGGGTTGCTGTTTAAATGAACTATTTGCTTATGCTCTAAGTCAGCATGGATGGGATCCATAGATCTGTCCCGAAGTCTTAAAAATTAGTCTCTTGACTTAGTGGCATGGGAATAGATGTGAAAGAACTTTGTTTTTAAAAAAATattaattaattaattaattaatttttgagacaaagtctcgctctttcacccaggctggagtgcagtggcgcgatctcagctcactgcaaactctgcctcccaggttcaagtgattttcgtgcctaagcctcccgagtagctgggaatacaggtgcacactgccaagcctggttaattttgtatttttagtagagacgggttttgccatgttggccaggctggtctcgaactcctgacctcaaatgatcctcccgccttggcctctcaaagtgctgggattaaaggtgtgagccactgtgcccggccAAAATGGGAAAAAGCTTTGTAAAATATAAAATATCCTTTAAATCTAAGAGCTTATGAAGGATATACTGCACACATAATCTAGGTCACGAAAGGATATGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16233418 1408 + 83442489 TTCTGATTGTTTCCCTATCTATTTAATAACTAGGGTACACATCATACTTGTCCTGAGAAGTTCCATTCCTGAGGAAAAACTATGCA-TGATTGTCTTATTTTGGAAATCTCAAATGTGGGATTCGTGTAATGGGCTTTGATAAAGGATGTTAAGGGGCAAAGTTAAGGCAGCCTTGTAAAGGTCAACTTGGAAACTAAATATCAGTAGGGAGTTATCTCAGTGGCTATAAGTTAAGACAACAGAATAAAAACTGATATTTGAGACATAAAAATGGCCC-AAAAGATGGGTGTAATGAGCCCATGAGTCCCCAGTATAACATGAAACTTGCCGATCTGCGTAGTGTACGGCATTTGGTGTTACTCACGTTGGTCTCATCAGTTTGCCCATCTAAATAAATTCATCTTACAAC-AATAGTTCTATAACATCTAGAAGTAAGTTCCCTCCTGTAGCCCACTTCATCAGAAACTTCTTGGCAACACCTGAACCTAGCTGGAACTGGAAAAATATTTGATGGTAGTGATTTCCTGATAAATAGTCCAGAGCTGTTGCAAACAAAATCCAAGGATTGCTCtttttagacagagtcttgctctgtcgcacaggctagagtgcagtggcttgacgttggctcactgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctgccgagcagctgagattacaggtgcgtgtcaccacaccccactaattttttgcatttttaatagagacggggtttcaccacattggtcaggctggttttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctaggattacaggtgtgagccactgtgcctggTTAAAGGGTTGCTG-TTAAATGAACTATTTGCTTATGCTCTAAGTCAGCATGGATGGGATCCATAGATCTGTCCCGAAGTCTTAAAAATTAGTCTCTTGACTTAGTGGCATGGGAATAGATGTGAAAGAACTTTGTTTTTAAAAAAATattaattaattaattaattaatttttgagacaaagtctcgctctttcacccaggctggagtgcagtggcacgatctcagctcactgcaaactctgcctcccaggttcaagtgattttcgtgcctaagcctcccgagtagctgggaatacaggtgcacactgccaagcctggttaattttgtatttttagtagagacgggttttgccatgttggccaggctggtctcgaactcctgacctcaaatgatcctcccgccttggcctctcaaagtgctgggattaaaggtgtgagccactgtgcccggccAAAATGGGAAAAAGCTTTGTAAAATATAAAATATCCTTTAAATCTAAGAGCTTATGAAGGATATACTGCACACATAATCTAGGTCACGAAAGGATATGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4080100 1405 + 4267968 TTCTGATTGTTTCCCTATCTATTTAATAACTAGGGTACACGTCAGACTTGTCCTGAGAAGTTCCATTCCTGAGGAAAAACTATGCG-TGATTGTCTTATTTTGGAAATCTCAAATGTGGGATTCGTGTAATGGGCTTTGATAAAGGATGTTAAGGGGCAAAGTTAAGGCAGCCTTGTAAAGGTCAACTTGGAAACTAAATATCAGTAAGGAGTTATCTCAGTGGCTATAAGTTAAGACAACAGAATAAAAACTGATATTTGAGACATAAAAATGGCCC-AAAAGATGGGTGTAATGAGCGCATGAGTCCCCAGTATAACATGAAACTTGCCGATCTGCGTGGCGTACGGCATTTGGTGTTACTCACGTTGGTCTCATCAGTTTGCCCACCTAAATAAATTCATCTTACAAC-AATAGTTCTATAACATCTAGAAGTAAGTTCCCTCCTGTAGCCCACTTCATCAGAAACTTCTTGGCAACACCTGAACCTAGCTGGAACTGGAAAAATATTTGATGGTAGTGATTTCCTGATAAATAGTCCAGAGCTGTTGCAAACAAAATCCAAGGATTGCTCtttttagacagagtcttgctctgtcgcacaggctagagtgcagtggcttgatgttggctcactgcaacctccgcctcccgggttcaagcgattctcctgcctcagcctgccgagtagctgagattacaggtgcgtgtcaccacactccactaattttttgcatttttaatagagacggggtttcaccacattggtcaggctggttttgaactcctgacctcaagtgatccacccaccttggcctcccaaagtgctaggattacaggtgtgagccactgtgcctggTTAAAGGGTTGCTGTTTAAATGAACTATTTGCTTATGCTCTAAGTCAGCATGGATGGGATCCATAGATCTGTCCTGAAGTCTTAAAAATTAGTCTCTTGACTTAGTGGCATGAGAATAGATGTGAAAGAACTTTGTTTTTTAAAAAATATTAATTAATTAATTAAtt----tttgagacaaagtctcgctctttcacccaggctggagtgcagtggcgcgatctcagctcactgcaaactctgcctcccaggttcaagtgattttcgtgcctaagcctcccgagtagctgggaatacaggtgcacactgccaagcctggttaattttgtatttttagtagagacgggttttgccatgttggccaggctggtctcgaactcctgacctcaaatgatcctcccgccttggcctctcaaagtgctgggattacaggtgtgagccactgtgccctgccAAGATGGGAAAAAGCTTTGTAAAATATAAAATATCCTTTAAATCTAAAAGCTTATGAAGGATATACTGCACACATAATCTAGGTCACGAAAGGATATGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2060475 1402 - 2193130 TTCTGATTGTTTCCGTATCTATTTAATAACTAGGGTACACGTCAGACTTGTCCTGAGAAGTTCCATTCCTGAGGAAAAACTATCCATTGATTGTCTTATTTTGGAAATCTCAAATGTGGG-TTCGTATAATGGGCTTTGATAAAAGATGTTAAGGGGCAAATTTAAGGCAGCCTCATAAAGGTCAACTTGGAAACTAAATATCAGTAGGGAGTTATCTCAGTGGCTATAAGTTAGGACAATAGAATAAAAACTGATATTTGAGACATAAAAATGGCCCAAAAAGATGGGCGTAATGAGCCCATGAGTCCCCAGTATAACATGAAACTTGCCGATCTGCGTGGTGTACGGCATTTGGTGTTACTCAGGTTGGTCTCATCAGTTTACCCACCTAAATAAATTCATCTTACAACAAAGAGTTCTATAACATCTAGAAGTAAGTTCCCTCCTGTAGCCCACTTCATCAGAAACTTCTTGGCAACACCTGAACCTGGCTGGAACTGGAAAAATATTTGATGGTAGTGATTTCCTGATAAATAGTCCAGAGCTGTTGCAAACAAAATCAAAGGATTGCTCtttttagacagagtcttgctctgtcacacaggctggagtgcagtggcttgatcttggctcactgcgacctttgcctcctgggttcaagtgattatcctgcctcagcctcccgagtagctgagattacaggtgcgtgtcaccacaccccactaattttttgtatttttaataaagatggggtttcaccacattgatcaggctggttttgaactcctgacctcaagtgattcacctacctcggcctcctaaagtgctaggattacaggtgtaagccactgtgcctggTTAAAGGGTTGCTGTTTAAATAAACTATTTGCTTGTGTTCTAAGTCAGCATGGATGGGATCCATAGATCTGTCCCAAAGTCTTAAAAATTAGTCTCTTGACTTAGTGGCATGGGAATAGATGTGAAAAAACTTTA-----AAAAAAATATTAATTAATTAATTAAtt----tttgagacaaagtctcactctttcacccaggctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcccaggttcaagtgatttttgtgcctgagcctcccgagtagctgggaatacaggtgcacaccaccaagcctggctaattttgtatttttagtagagatgggttttgccacgttggccaggctggtctcgaactcctgacctcaaatgatcctcccgccttggcctctcaaagtgctgggattacaggcgtgagccactgcgcctggccAAAATGGGAAAAAGCTTTGTAAAATATAAAATATCCTTTAAATTTAAGAGCTTATGAAGGATATACTGCACACATAATCTAGGTCATGAAAGGATATGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21457664 4882 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=107062.000000 s hg38.chr17_JH159148v1_alt 18822 101 + 88070 AAGATGAGTATAGATTACTAGGTGATAAATTGGGAAA-TGCCTTAGTTGCAAAGAAGATAATTCAAA-TTATAAATACAATGAAGAAATGTGCAGGAAAGATA s panTro5.chr17 16329942 101 + 83181570 AAGATGAGTATAGATTACTAGGTGATAAATTGGGAAA-TGCCTTAGTTGCAAAGAAGATAATTCAAA-TTATAAATACAATGAAGAAATGTGCAGGAAATATA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16234826 101 + 83442489 AAGATGAGTATAGATTACTAGGTGATAAATTGGGAAA-TGCCTTAGTTGCAAAGAAGATAATTCAAA-TTATAAATACAATGAAGAAATGTGCAGGAAAGATA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4081505 101 + 4267968 AAGATGAGTATAGATTACTAGGTGATAAATTGGGAAA-TGCCTTAGTTGCAAAGAAGATAATTCAAA-TTATAAATACAATGAAGAAATGTGCAGGAAACATA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2061877 101 - 2193130 AAGATGAGTGTAGATTACTAGGTGATAAATTGGTAAA-TGCCTTAGTTGCAAAGAAGATAATTCAAA-TTATAAATACAATGAAGAAATGTGCAGGAAAGATA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s canFam3.chr9 21462546 103 + 61074082 AAGATGAGTAGAGATTATTAGGAAATTAACCAGGAAAGTGCTATTGTAGCTAGGAAGACCACTCAAAGTTATGACAAAAGAAAGGAAAAAGGAAACAAAAATA i canFam3.chr9 I 4882 I 107 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=272062.000000 s hg38.chr17_JH159148v1_alt 18923 296 + 88070 TTTTAGAGGTGGCAAAATTAACCAGTTATTAAGACAATCAGCAGAGGTGGTGGACAGGGATGGTGAATCTCATGCATGTCCAATTTCTAGTGATACTCATTAGTTAAATCCAAACCCTCACTAGTGGCCATGAAGTCCAATGTTTCTTTAAAAAGGCAGTAAGGACCAATGaagatttttttccttgtccatagtttagtcaagcttctgaaccttctcataggcccatgggtgcacttccttgtaaaatccagttttgtaaaattttagcaaagagccctgctaaataggtttag s panTro5.chr17 16330043 296 + 83181570 TTTTAGAGGTGGCAAAATTAACCAGTTATTAAGACAATCAGCAGAGGTGGTGGACAGGGATGGTGAATCTCATGCATGTCCAATTTCTAGTGATACTCATTAGTTAAATCCAAACCCTCACTAGTGGCCATGAAGTCCAATGTTTCTTTAAAAAGGCAGTAAGGACCAATGaagatttttttccttgtccatagtttagtcaagcttctgaaccttctcataggcccatgggtgcacttccttgtaaaatccagttttgtaaaattttagcaaagagccctgctaaataggtttag i panTro5.chr17 C 0 C 0 s panPan2.chr17 16234927 296 + 83442489 TTTTAGAGGTGGCAAAATTAACCAGTTATTAAGACAATCAGCAGAGGTGGTGGACAGGGATGGTGAATCTCATGCATGTCCAATTTCTAGTGATACTCATTAGTTAAATCCAAACCCTCACTAGTGGCCATGAAGTCCAATGTTTCTTTAAAAAGGCAGTAAGGACCAATGaagatttttttccttgtccatagtttagtcaagcttctgaaccttctcataggcccatgggtgcacttccttgtaaaatccagttttgtaaaattttagcaaagagccctgctaaataggtttag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4081606 296 + 4267968 TTTTAGAGGTGGCAAAATTAACCAGTTATTAAGACAATCAGCAGAGGTGGTGGACAGGGATGGTGAATCTCATGCATGTCCAATTTCTAGTGATACTCATTAGTTAAATCCAAACCCTCACTAGTGGCCATGAAGTCCAATGTTTCTTTAAAAAGGCAGTAAGGACCAATGaagatttttttccttgtccatagtttagtcaagcttctgaaccttctcataggcccatgggtgcacttccttgtaaaatccagttttgtaaaattttagcaaagagccctgctaaataggtttag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2061978 294 - 2193130 TTTAAGAGGTGGCAAAATTAACCAGTTATT--TACAATCAGCAGAGGTGGTGGACAGGGATGGTGAATCTCATGCATGTCCAATTTCTAGTGATACTCATTAGTTAAATCCAAACCCTCACTAGTGGCCACGAAGTCCAATATTTCTTTGAAAAGGCAGTAAGGACCAATGaagatttttttccttgtccatagtttagtcaagcttctgaaccttctcataggcccatgtgcgcacttccttgtaaaatccagttttgtaaaattttagcaaagagccctgctaaatagatttag i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e cebCap1.NW_016107730v1 1904325 86 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e saiBol1.JH378271 1853173 96 + 3513951 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=5971.000000 s hg38.chr17_JH159148v1_alt 19219 4 + 88070 caag s panTro5.chr17 16330339 4 + 83181570 caag i panTro5.chr17 C 0 C 0 s panPan2.chr17 16235223 4 + 83442489 caag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4081902 4 + 4267968 caag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2062272 4 - 2193130 caag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1853269 4 + 3513951 caga i saiBol1.JH378271 I 96 C 0 s cebCap1.NW_016107730v1 1904411 4 + 1920343 caaa i cebCap1.NW_016107730v1 I 86 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7018238 100 - 7032639 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=798926.000000 s hg38.chr17_JH159148v1_alt 19223 362 + 88070 aactccccatcctcgatatctgatcacccttaatagcggatcagatctcttatctgccaccattctccaagtgatgtttgatcaccctcgcctgtcttcagcaagagcacttttag-gtcagtttagccaaaatttccctactggtgatgcttcctcttagtaattttccatccactgaccgccaccctgctccttggctgtaaattctcacttgcccatgctatgttaggagatgagtccaatctctgtctcccaatgcaagaccctgttatggtggttcctttgtttactgcagtgttcctgaataaagtctcccttaccaggctttcacaagtgccattgaataattttttttttaacaA s panTro5.chr17 16330343 361 + 83181570 aactccccatcctcgatatctgatcacccttaatagcggatcagatctcttatctgccaccattctccaagtgatgtttgatcaccctcgcctgtcttcagcaagagcacttttag-gtcagtttagccaaaatttccctactggtgatgcttcctcttagtaattttccatccactgaccgccaccctgctccttggctgtaaattctcacttgcccatactattttaggagatgagtccaatctctgtctcccaatgcaagaccctgttatggtggttcctttgtttactgcagtgttcctgaaaaaagtctcccttaccaggctttcacaagtgccactgaataattttttttt-aacaA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16235227 360 + 83442489 aactccccatcctcgatatctgatcacccttaatagaagatcagatctcttatctgccaccattctccaagtgatgtttgatcaccctcgcctgtcttcagcaagagcacttttag-gtcagtttagccaaaatttccctactggtgatgcttcctcttagtaattttccatccactgaccgccaccctgctccttggctgtaaattctcacttgcccatgctattttaggagatgagtccaatctctgtctcccagtgcaagaccctgttatggtggttcctttgtttactgcagtgttcctgaataaagtctcccttaccaggctttcacaagtgccactgaataatttttttt--aacaA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4081906 354 + 4267968 aactccccatcctctatatctgatcacccttaatagcggatcagatctcttatctgccaccattctccaagtgatgtttgatcaccctcgcctgtcttcagcaagagcacttttag-gtcagtttagcc-aaatttccctactggtgatgcttcctcttagtaattttccatccactgaccgccaccctgctccttggctgtaaattctcacttgcccatgctatgttaggagatgagtccaatctctgtctcc-------aatccctgttatggtggttcctttgtttactgcagtgttcctgaataaagtctcccttaccaggctttcacaagtgccattgaataattttttttttaacaA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2062276 360 - 2193130 agctccccatcctcgatatctaatcacccttaacagcggatcagatctctcatctgccacaattctccaagttatatttgatcaccctcgcctgtcttcagcaagagcacttttag-gtcagtttagccaaaatttccctactggtgatgcttcctctcagtaattttccatccactgaccaccaccctgctccttggctgtaaattctcacttgcccatgctatattaggagatgaatccaatctctgtctcccattgcaagaccctgttatggtggttcctttgtttgctgcaatgttcctgaataaagtctcccttaccaggctttcacaagtgccattgaataatttttttt--aacaA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1853273 359 + 3513951 aactccccagcctcgatatctgatcacccttaatatctgatcggatctcttatcctccaccattctccaagtgatgtttgatcaccctggcctgtcatcagcaagaatactgttaacatcagtttagccaaaatgtccccattgctgatgcttccttctagtaattttctatccactgacccccaccttgctccttggctgtcagttctcacttgctcatgctatattaggagatgagtccaatctctctctgccagtgcaagaagctgttat-gtggttcctttgcctactgcagtgttcctgaat-acgtctcccttaccatgctttcacaagtgtcactgaataattattttt--aacaA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1904415 358 + 1920343 aactccccatcctcgatatctggtcacccttaatagctgatcagatcccttatcctccgccattctccaagtgatgtttcat-accctggcctgtcatcagcaagaatacggttag-atcagtttagccaaaatgtctccattgctgatgcttcctcttagcaattttccatccactgacccccaccctgctccttggctgtcaattctcacttgcttatgctatattaggagatgagtccaatctctctctgccagtgcaagaccctgttatggtggttcctttgcctactgcagtgttcctgagt-aagtctcccttcccatgctttcacaagtgtcactgaataattattttt--aacaA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7018338 359 - 7032639 aactccccatcctcgatatctgatcacccttaatagctgatcagatctcttatcctccatcattctccaagtgatgtttgatcaccctgacctgtcatcagcaagaatactgttag-atcaatttagccaaaatgtccccattgctgatgcttcctcttagcaattttccatccactgacccccaccctgctccttggctgtcagttctcacttgctcatgctctattaggagatgagtccaatctctctctgccagtgcaagaccctgttatggtggttcctttgcctactgcagtgttcctgaat-aagtctcccttaccatgctttcacgagtgtcactgaataattactttt--aacaA i aotNan1.NW_018502359v1 I 100 C 0 e mm10.chr11 22113540 378 - 122082543 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e calJac3.chr5 46143832 769 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=884416.000000 s hg38.chr17_JH159148v1_alt 19585 309 + 88070 GACTATGATGAATTTTTAAAAGCCAAATCCCTATTGTTTCCCTGATAACA----TATTATTTCACCAGAAAAATAAATATAAGAAATTCATTTTAAATGTATCTCAAACCATCAGAAAAGGGCTTAACCTTATTGAACTGAGCTACTAGGAAAGAGGAGGAAAGAAGAAGAGTGGAAACCATCGGTCATTCAGTGCAAGCA-TGTCCGGCTGTCACCAATAAGCTAGCTGTACCTGTCTTAGGACAGAGCTG----------------------TATGAAGGAAGTTAATATTTACCAGTTAAAAGAAAAACGAAAGAGGAAAACAGTGATTCAGC s panTro5.chr17 16330704 309 + 83181570 GACTATGATGAATTTTTAAAAGCCAAATCCCTATTGTTTCCCTGATAACA----TATTATTTCACCAGAAAAATAAATATAAGAAATTCATTTTAAATGTATCTCAAACCATCAGAAAAGGGCTTAACCTTATTGAACTGAGCTACTAGGAAAGAGGAGGAAAGAAGAAGAGTGGAAAGCATCGGTCATTCAGTGCAAGCA-TGTCCGGCTGTCACCGATAAGCTAGCTGTACCTGTCTTAGGACAGAGCTG----------------------TATGAAGGAAGTTAATATTTACCAGTTAAAAGAAAAATGAAAGAGGAAAACAGTGATTCAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16235587 309 + 83442489 GACTATGATGAATTTTTAAAAGCCAAATCCCTATTGTTTCCCTGATAACA----TATTATTTCACCAGAAAAATAAATATAAGAAATTCATTTTAAATGTATCTCAAACCATCAGAAAAGGGCTTAACCTTATTGAATTGAGCTACTAGGAAAGAGGAGGAAAGAAGAAGAGTGGAAAGCATCGGTCATTCAGTGCAAGCA-TGTCCGGCTGTCACCGATAAGCTAGCTGTACCTGTCTTAGGACAGAGCTG----------------------TATGAAGGAAGTTAATATTTACCAGTTAAAAGAAAAATGAAAGAGGAAAACAGTGATTCAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4082260 309 + 4267968 GACTATGATGAATTTTTAAAAGCCAAATCCCTATTGTTTCCCTGATAACA----CATTATTTCACCAGAAAAATAAATATAAGAAATTCATTTTAAATGTATCTCAAACCATCAGAAAAGGGCTTAACCTTATTGAACTGAGCTACTAGGAAAGAGGAGGAAAGAAGAAGAGTGGAAAGCATCGGTCATTCAGTGCAAGCA-TGTCCGGCTGTCACCAATAAGCTAGCTGTACCTGTCTTAGGACTGAGCTG----------------------TATGAAGGAAGTTAATATTTACCAGTTAAAAGAAAAACGAAAGAGGAAAACAGTGATTCAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2062636 331 - 2193130 GACTATGATGAATTTTTAAAAGCCAAATCCCTATTGTTTCCCTGATAGCA----TATTATTTCACCAGAAAAATAAATATAAGAAGTTAATTTTAAATGTGTCTTAAACCATCAGAAAAGAGCTTAACCTTATTAAACTGAGCTACTAGGAAAGAGGAGGAAAGAAGAAGAGTGGAAAGCACCGGTCATTCAGTGCAAGCA-TGTCCGACTGTCACCAATAAGCTAGCTGTACCTGTCTTAGGACAGAGCTGTACCTGTCATAGGACAGAGCTATATGAAGGAAGTTAATATTTACCAGTTAAAAGCAAAATGAAAGAGGAAAACAGTGATTCAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46144601 311 - 159171411 GACTATGATGAATTTTTAAGAGCCAAATCCTTATTGTTTTCCTGATAACACAATTATTATTTCACCAGAAAAATAAATATAAGAAGTCCATTTTAAATGTATCTCAAACCATCAGAAAAGGACTTAACCTTATTGAACTGAGCTACCAGGAAAGTGGAGG---GAAGAAAAATGGATAGGATAGGTCACTCAGTTCAAGCACTGTCTGGCTGCCACCAATGAGCTAGCTGTACCTGTTTTAGGACAGAGCAG----------------------TACAAAGAAAGTTAATATTTATCAGTTAAAAGCAAAGTAAAAGAGGAAAGCAGCAATTCAGC i calJac3.chr5 I 769 C 0 s saiBol1.JH378271 1853632 304 + 3513951 GACTGTGATGAATTTTTAAGAGCCACATCC---TTGTTTCCCTGATAACA----TATTATTTCATCAGAAAAATAAATATAAGAAGTCCATTTTAAATGTATCTCAAACCATCAGAAAAGGACTTAACCTTATTGAACTGAGCTACCAGGAAAGAGGAGG---GAAGAAAAGTGGGTAGGATAGGTCACTCAGTGCAAGCATTGTCCAGCTGCCACCAATGAGCTAGCGGTACCTGTCTTAGGACAGAGCTG----------------------TACAAAGGAAGTTAATATTTACCGGTGAAAAGCAAAGTAAAAGAAGAAAGCAGCAATTCAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1904773 304 + 1920343 GACTATGATGAATTTTTAAGAGCCAAATCC---TTGTTTCCCTGATAACA----TATTATTTCATCAGAAAAATAAACATAAGTAGTCCATTTTAAATGTATCTCAAACCATCAGAAAAGGACTTAACCTTACTGAACTGAGCTACCAGGAAAAAGGAGG---GAAGAAAAGTGGATAGGATAGGTCACTCAGTGCAAGCGTTGTCTGGCTGCCACCAATGAGCTAGCTGTACCTGTCTTAGGACAGAGCTA----------------------TACAAAGGAAGTTAATATTTACCAGTTAAAAGCAAAGTAAAAGAGGAAAGCAGCAATTCAGC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7018697 307 - 7032639 GACTGTGATGAATTTTTAAGAGCCAAATCCTTATTGTTTCCCTGATAACA----TACTATTTCACCAGAAAAATAAATGTAAGAAGTCCATTTTAAATGTATCTCAAACCATCAGAATAGGACTTAACCTTATTGAACTGAGCTACCAGGAAAGAGGAGG---GAAGAAAAGTGGATAGGGTAGGTCACTCAGTGCAAGCGTTGTCCGGCTGCCACCAATGAACTAGCTGTACCTGTCTTAGGACAGAGCTA----------------------TACAAAGGAAGTTAATATTTACCAGTTAAAAGCAAAGTAAAAGAGGAAAGCAGCAATTCAGC i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22846162 927 + 28711273 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=1126053.000000 s hg38.chr17_JH159148v1_alt 19894 356 + 88070 ACTAAACAGAATT-------AAGAGTCAGTC-----ATTTGAAATATAGAAAGCCCTAGAAATACCATTACAAACAACAATAATAACAATAAGCCCCCTATTGTATAATAACAAATTGTGCAATAGGTAAAAGATAGATTGTTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGGCCAAAAAGG----------------------------------AAAAAACTGCTCTTGCAATTCAAGTTCGGGTATATATTTTGCAAATGCTGGCATGCTCAATGCTTCCTGAAGGAGAGGGAGCTATCCTTATTTTGATCAGTTCAGATTGAATGAAAATTTTCTCTGATGCTAATATAGAtccagtctccc-aaattttaggttccccacgattcttcaaac s panTro5.chr17 16331013 356 + 83181570 ACTAAACAGAATT-------AAGAGTCAGTC-----ATTTGAAATATAGAAAACCCTAGAAATACCATTACAAACAACAATAATAACAATAAACCCGCTATTGTATAAAAACAAATTGTGCAATCGGTAAGAGATACATTGTTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGGCCAAAAAGG----------------------------------AAAAAACTGCTCTTGCAATTCAAGTTCGGGTATATATTTTGCAAATGCTGGCATGCTCAATGCTTCCTGAAGGAGAGGGAGCTATCCTTATTTTGATCAGTTCAGATTGAATGAAAATTTTCTCTGATGCTAATATAGAtccagtctccc-aaattttaggttccccacgattcttcaaac i panTro5.chr17 C 0 C 0 s panPan2.chr17 16235896 356 + 83442489 ACTAAACAGAATT-------AAGAGTCAGTC-----ATTTGAAATATAGAAAACCCTAGAAATACCATTACAAACAACAATAATAACAATAAACCCGCTATTGTATAAAAACAAATTGTGCAATAGGTAAGAGATACATTGTTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGGCCAAGAAGG----------------------------------AAAAAACTGCTCTTGCAATTCAAGTTCGGGTATATATTTTGCAAATGCTGGCATGCTCAATGCTTCCTGAAGGAGAGGGAGCTATCCTTGTTTTGATCAGTTCAGATTGAATGAAAATTTTCTCTGATGCTAATATAGAtccagtctccc-aaattttaggttccccacgattcttcaaac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4082569 355 + 4267968 ACTAAACAGAATT-------AAGAGTCAGTC-----ATTTGAAATATAGAAAGCCCTAGAAATACCATTACAAACAACAATAATAACAATAAACCCCCTATTGTATAATAACAAATTGTGCAATAGGTAAGAGATAGATTGTTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGGCCAAAAAGG-----------------------------------AAAAACTGCTCTTGCAATTCAAGTTCGGGTATACATTTTGCAAATGCTGGCATGCTCAATGCTTCCTGAAGGAGAGGGAGCTATCCTTATTTTGATCAGTTCAGATTGAATGAAAATTTTCTCTGATGCTAATATAGAtccagtctccc-aaattttaggttccccatgattcttcaaac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2062967 353 - 2193130 ACTAAACAGAATT-------AAGAGTCAGTC-----ATTTGAAATATAGAAAACCCTAGAAATACCATTACAAACAACAACAATAACAATAAACCCCCTATTGTATAAT---AAATTGTGCAATAGGTAAGAGATAGATTGTTTAAAGTCTTCTTGGAGGTT-GTAAGTTATTTTCAGGGCCAAAAAGT----------------------------------AAAAAACTGCTCTTGGAATTTAAGTTCTGGTATATATTTTGCAAATGCTGGCATGCTCAATGCTTCCTGAAGGAGAGGGAGCTATCCTTATTTTGATCAGTTTAGATTGAATGAAAATTTTCTCTGATGCCGATATAGATCCAGTCTCCC-AAATTTTAGGTTCCCCACAATTCTTCAGAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46144912 382 - 159171411 CCTAAACAGAATT-------AAGAGTCAATC-----ATTTGAAATATAGAAAACCCTAGCAATATCATTACAAACAACAACAACA---ATAAATCTTCTATTGTATAATGACACATTGTGCAATAACTAAGACATAGATTATTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGGCCAAAAAGTAAaacaacaacaacaacaacaacaaAAGACCCAAAAAAAACTGCTCTTGCAATTCAAGTTCTGGTATATATTTTGCAAATGCTGGAATGCTCAACTCTTCCTGA---AGAAGGAGCTCTCCTTATTTTGATCAGTTT--ATTGAACGAAAATTGTCTCTGTTGCTGATATAAATCCAGTCTCCC-AAATCTTACGTTCCCCACAATTCTTCAGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1853936 371 + 3513951 CCTAAACAGAATT-------AAGAGTCAATC-----ACTTGAAATATAGAAAACCCTGGCAATACTATTACAAACAACAACAATAAC-ATAAATCTTCTTTTGTATAATGACACATTGTGCAATAACTAAAAGATAGATTATTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGGCCAAAAAGTCaaaca-----------aaaaacaaaaaac----aaaaaacTTCTCTCGCAATTCAAGTTCTGGTGTATATTTTGCAAATGCTGGAATGCTCAACGCTTCCTGA---AGAAGGAGCTATCCTTATTTTGATCAGTTTAGATTGAATGAAAATTGTCTCTGATGCAGATATAAAtccagtctccc-aaatcttaggttccccacaagtcttcagac i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905077 368 + 1920343 CCTAAACAGAATT-------AAAAGTCAATC-----ATTAGAaatatagaaaaccctagcaataccattataaacaacaacaataacaataaATCTTCTATTGTATAATGACACATTGTGCAATAACTAAGAGATAGATTATTTAAAGTCTTCTTGGATGTT-GTAAGTTATTTTCAGGACCaaaaagtaa---------------aaaaacaaaaaac----aaaaaaCTCCTCTTGCAATTCAAGTTCTGGTATATATTTTGCAAATGCTGGAATGCTCTACGCTTCCTGA---AGAGGGGGCTATCCTTATTTTGATCAGTTTAGATTGAATGAAAATTGTCTCTGATGCTGATATAAAtccagtctccc-aaatcttaggttccccacaattcttcagac i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019004 370 - 7032639 CCTAAACAGAATT-------AAGAGTCACTC-----ATTCGAaatatagaaaaccctagcaataccactacaaacaacaacaataacaataaATCTTCTATTGTATCATGACACATTGTGCAATAACTAAGAGATAGACTATTTAAAGTCTTCTTAGATGAT-GTAAGTTATTTTCAGGGCCAAAAAGTGAAA-------------AAAACCAAAAAAC----AAAAAACTGCTCTTGCAATTCAAGTTCTGGTATATATTTTGCAAATGCTGGAATGCTCAACGCTTCCTGA---AGAAGGAGCTATCCTTATTTTGATCAGTTTAGATTCAATGAAAATTATCTCTGATGCTGATATAAAtccagtctccc-aaatcttaggttccccacaattcttcagac i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22847089 364 + 28711273 attagacaaaattcactcccacgaatcactcagagaAGTGGAAGTACAGAAAACCCTGGAAATGCCACTATAAACAACAACAACAAC----AACTCTCTATTGTGTGACAACAAATTCTCTAACAGCTGAGAGATAGATCGTCTAAAGTCCTCATGGATGCTAATGCGTTA-TTTCAAGGTCAACAAG-----------------------------------CAAAAAGAGCTCTTGCAACTCAAATGCTGGAATGTACATTGTAAGCACTGGGATGCTCACTACCTCCTGAGAGGGAAGGAAGTATCCTTATCTCAGTCAACTGAAACTTAATGAAAATTATCTGCGAGGCTGATATCCAttcagtctccctgtgtcttaggttccctgtgattcttcaaac i otoGar3.GL873537 I 927 I 41 e mm10.chr11 22113540 378 - 122082543 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=49784.000000 s hg38.chr17_JH159148v1_alt 20250 15 + 88070 atcaccaataagagt s panTro5.chr17 16331369 15 + 83181570 atcaccaataagagt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236252 15 + 83442489 atcaccaataagagt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4082924 15 + 4267968 atcaccaataagagt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063320 15 - 2193130 ATCACCAATAAGAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46145294 15 - 159171411 ATCACCGATAAGAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854307 15 + 3513951 atcaccaataagagt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905445 15 + 1920343 atcaccaataagagt i cebCap1.NW_016107730v1 C 0 I 3045 s aotNan1.NW_018502359v1 7019374 15 - 7032639 atcaccaataagagt i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22847453 41 + 28711273 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=20888.000000 s hg38.chr17_JH159148v1_alt 20265 8 + 88070 tcaatgtt s panTro5.chr17 16331384 8 + 83181570 tcaatgtt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236267 8 + 83442489 tcaatgtt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4082939 8 + 4267968 tcaatgtt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063335 8 - 2193130 TCAATGTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46145309 8 - 159171411 TCAATGTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854322 8 + 3513951 tcaatgtt i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7019389 8 - 7032639 tcaatgtt i aotNan1.NW_018502359v1 C 0 I 281 e mm10.chr11 22113540 378 - 122082543 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22847453 41 + 28711273 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=14636.000000 s hg38.chr17_JH159148v1_alt 20273 13 + 88070 cttggctgggtgt s panTro5.chr17 16331392 13 + 83181570 cttggctgggtgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236275 13 + 83442489 cttggctgggtgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4082947 13 + 4267968 cttggctgggtgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063343 13 - 2193130 CTTggccaggtgc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46145317 13 - 159171411 TTCACTTGGACGT i calJac3.chr5 C 0 I 277 s saiBol1.JH378271 1854330 13 + 3513951 ttcacttggatgt i saiBol1.JH378271 C 0 I 45370 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22847453 41 + 28711273 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=227835.000000 s hg38.chr17_JH159148v1_alt 20286 272 + 88070 ggtggctcacacctgtaatcccagcactttgggaggccagtgtgggcctcccaaagatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaacatgggcatggtggcgggcacctgtaatcccagctactcaggaggctgaagcaggagaattgcttgaaccttggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctggtgacagagcgagacttatctcaaaaaaaaaaaaaaaaaaaaaaaaaa s panTro5.chr17 16331405 259 + 83181570 ggtggctcacacctgtaatcccagcactttgggaggccagtgtgggc-------agatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaacatgggcatggtggcgggcacctgtaatcccagctactcaggaggctgaagcaggagaattgcttgaatcttggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctggtgacagagcgagacttatctcaaaaaaaaaaaaaaaaaaaa------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236288 255 + 83442489 ggtggctcacacctgtaatcccagcactttgggaggccagtgtgggc-------agatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaacatgggcatggtggcgggcacctgtaatcccagctactcaggaggctgaagcaggagaattgcttgaatcttggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctggtgacagagcgagacttatctcaaaaaaaaaaaaaaag---------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4082960 263 + 4267968 ggtggctcacacctgtaatcccagcactttgggaggccagtgtgggc-------agatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaacatgggcatggtggcgggcacctgtaatcccagctactcaggaggctgaagcaggagaattgcttgaaccttggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctggtgacagagcgagacttatctcaaaaaaaaaaaaaaaaaaaaaaaa-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063356 250 - 2193130 ggtggctcacacccataatcccagcactttgggaggccaatgtgggc-------agatcatgaggtcaagaggtcgagaccatcctggccaacatggtgaaacatgggcatggtggcacgcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaaacttggaggtggaggttgcagtgagccaagatcacaccactgcactccagcctggtgacagagtgagacttatctcaaaaaaaaaaa--------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e dasNov3.JH570468 462571 648 - 852752 I e otoGar3.GL873537 22847453 41 + 28711273 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=32437.000000 s hg38.chr17_JH159148v1_alt 20558 39 + 88070 aaaagagc--tcagtgttcaatgttctcacttggaagatgt s panTro5.chr17 16331664 35 + 83181570 ----gagc--tcagtgttcaatgttctcacttggaagatgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236543 35 + 83442489 ----aagc--tcagtgttcaatgttctcacttggaagatgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083223 35 + 4267968 ----gagc--tcagtgttcaatgttctcacttggaagatgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063606 35 - 2193130 ----GAGC--TCAATgttcaatgttctcacttggaagatgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s dasNov3.JH570468 463219 41 - 852752 aaaagaacttttaatattgtatttccccCAGCAAaaggtat i dasNov3.JH570468 I 648 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e otoGar3.GL873537 22847453 41 + 28711273 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=194862.000000 s hg38.chr17_JH159148v1_alt 20597 134 + 88070 ctcagtatctgagaagtagtttgtccacggtcaggaaactagaactcatttaaagaaactaaattctctcctatgctgtttacatccatttggggccactattcccctttccagctgtcc----ttctacacaattct s panTro5.chr17 16331699 134 + 83181570 ctcagtatctgagaagtagtttgtccacggtcaggaaactagaactcatttaaagaaactaaattctctcctatgctgtttacatccatttggggccactattcccctttccagctgtcc----ttctacacaattct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236578 134 + 83442489 ctcagtatctgagaagtagtttgtccacggtcaggaaactagaactcatttaaagaaactaaattctctcctatgctgtttacatccatttggggccactattcccctttccagctgtcc----ttctacagcattct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083258 134 + 4267968 ctcagtatctgagaagtagtttgtccacggtcaggaaactagaactcatttaaagaaactaaattctgtcctatgctgtttacatccatttggggccactattcccctttccagctgtcc----ttctacacaattct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063641 133 - 2193130 ctcagtatctgagaagta-tttgtccaaggtcaggaaactaaaactcatttaaagaaactaaattctctcctatgctgtttacatccatttggggccactattcccctttccagttgtcc----ttctacacaattct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22847494 132 + 28711273 ctcagtgtccacgaagtagtttgttcaaggtcatg-aactagaaaggactcaaagaaaccacattctctccta-gatgtttacacccacttgggatcatgattcctctttccaattgtgt----tcctacacaattgt i otoGar3.GL873537 I 41 C 0 s dasNov3.JH570468 463260 133 - 852752 ctcagtatttgaaaagtaatttgtccaaggtcgggaaactagaactcttttagagaaac----ttctctcctaacctg-ttatatccatctgaggccattattctttctttcaaaagttcttttttctacacaattct i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22113540 378 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=251146.000000 s hg38.chr17_JH159148v1_alt 20731 188 + 88070 gttcaaatattattctttgaatatataagta-at--------attaagaagtcctcctttcttatgtcTTAATCATAATTTT------ACCAGTAGATCTTAAATGAAATCCCTTATATTCTTATCATCACCTATTT--GTGTAGGT--ACAGTTCTTTCATAGTGGACTTAATGTTGGTCTTAGTGAGTGGTTTGTTT---------TATATATT s panTro5.chr17 16331833 188 + 83181570 gttcaaatattattctttgaatatataagta-at--------attaagaagtcctcctttcttatgtcTTAATCATAATTTT------ACCAGTAGATCTTAAATGAAATCCCTTATATTCTTATCATCACCTATTT--GTGTAGGT--ACAATTCTTTCATAGTGGACTTAATGTTGGTCTTAGTGAGTTGTTTGTTT---------TATATATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236712 188 + 83442489 gttcaaatattattctttgaatatataagta-at--------attaagaagtcctcctttcttatgtcTTAATCATAATTTT------ACCAGTAGATCTTAAATGAAATCCCTTATATTCTTATCATCACCTATTT--GTGTAGGT--ACAATTCTTTCATAGTGGACTTAATGTTGGTCTTAGTGAGTTGTTTGTTT---------TATATATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083392 188 + 4267968 gttcaaatattattctttgaatatgtaagta-at--------attaagaagtcctcctttcttatgtcTTAATCATAATTTT------ACCAGTAGATCTTAAATGAAATCCCTTATATTCTTATCATCACCTATTT--GTGTAGGT--ACAATTCTTTCATAGTGGACTTAATGTTGGTCTTAGTGAGTGGTTTGTTT---------TATATATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063774 183 - 2193130 gttcaaatatgattc-tTGAATATA----TA-AT--------ATTGAGAAGTCCTCTTTTCTTATGTCTTCATCATAATTTT------ACTAGTAGATCTTAAATGAAATCCTTTATATTATTTTCATCACCTATTT--GTGTAGGA--ACGATTCTTTCATAGTGGACTTAACGTTGGTCTTAGTGAGTGCTTTGTTT---------TATATATT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22847626 182 + 28711273 gttcaaatattatcctttaaacatgtaagta-at--------attgagaagtccccctttcttgtg------tcatAATTTT------GCCAATAGATCTTAAACGAGATCTTAAGCATTCTTATTATCACGTATTT--GTGTGGGG--AAGAT--ATAAATATGAGACTTA-------TCTTACTGTGTTTTATATCTATACATGCGTATGTATA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22113918 176 - 122082543 gctCACATGTTAGTTTTT-AATACACAAGTA-AC--------ATTATGTAGAC-----TCCTTAGGCCATATTAAAGATTTTTTTCTAGTCAGTGGACCTTCATTGAAATCTTACTTCTTCCTTTACTCTCCTATTTAGGTGTGGGC--A-GATTGTCTCCTAGGGAATTTGCTTTGGCGTTTAATGGATTGTT---------------------- i mm10.chr11 I 378 C 0 s dasNov3.JH570468 463393 197 - 852752 gttcaaatatcacccctggaatacatgagtatatggtaactagttgagaattcctcttttcttatgtcataattaaaattat------accaATGGATCTTAAG-GAAACCTTAATTCTTTTTATAATTGCCTGCTT--GTGTAGGGGAAAAATTCTCTCACAG-GAATTTGTTTTTGGTCTTAGTGAGCTGTTTGTTT---------TATATATT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2192766 828 + 4569836 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=7341.000000 s hg38.chr17_JH159148v1_alt 20919 3 + 88070 AAG s panTro5.chr17 16332021 3 + 83181570 AAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236900 3 + 83442489 AAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083580 3 + 4267968 AAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063957 3 - 2193130 AAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s colAng1.NW_012122154v1 2193594 3 + 4569836 aAG i colAng1.NW_012122154v1 I 828 C 0 s otoGar3.GL873537 22847808 3 + 28711273 AAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22114094 2 - 122082543 -AG i mm10.chr11 C 0 C 0 s dasNov3.JH570468 463590 3 - 852752 AAA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e manLeu1.NW_012106252v1 2169759 823 + 4244037 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e chlSab2.chr16 64929396 1467 + 75148670 I e cerAty1.NW_012006043v1 1985405 848 - 8458610 I e macNem1.NW_012014910v1 2100117 822 + 10377808 I e macFas5.chr16 28043513 823 - 80997621 I e rheMac8.chr16 30130660 824 - 77216781 I a score=110492.000000 s hg38.chr17_JH159148v1_alt 20922 17 + 88070 TATACTTATGCTTTGCT s panTro5.chr17 16332024 17 + 83181570 TATACTTATGCTTTGCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236903 17 + 83442489 TATACTTATGCTTTGCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083583 17 + 4267968 TATACTTATGCTTTGCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063960 17 - 2193130 TATACTTGTGCTTTGCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131484 17 - 77216781 TATACTTATACTTTGCT i rheMac8.chr16 I 824 I 2 s macNem1.NW_012014910v1 2100939 17 + 10377808 TATACTTATGCTTTGCT i macNem1.NW_012014910v1 I 822 I 2 s cerAty1.NW_012006043v1 1986253 17 - 8458610 TATACTTATGCTTTGCT i cerAty1.NW_012006043v1 I 848 C 0 s chlSab2.chr16 64930863 17 + 75148670 TATACTTATGCTTTGCT i chlSab2.chr16 I 1467 C 0 s manLeu1.NW_012106252v1 2170582 17 + 4244037 TATACTTATGCTTTGCT i manLeu1.NW_012106252v1 I 823 C 0 s colAng1.NW_012122154v1 2193597 17 + 4569836 TATACTTATGCTTTGCT i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22847811 17 + 28711273 TATATTTATGCTTTGCT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22114096 17 - 122082543 TATATGTATGCTCTGTT i mm10.chr11 C 0 C 0 s dasNov3.JH570468 463593 9 - 852752 CATATTTGT-------- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28043513 823 - 80997621 I a score=2449648.000000 s hg38.chr17_JH159148v1_alt 20939 347 + 88070 ATATTTATTACTATTGGGCACTTAAAGGGGAATGCTTGGAAAAAACTGGGTTGATTTTGCTAGGAATCAACCTTAAA-GGGCAGAAGATTATTGAAATTTGACCCTTTCCATCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGAAAGAGGATCTGAAGGTTTTCTGGTCTGGGACAGGCCACAGCCACTGTGGAACGCAGTGATAATAAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCGAGTTTATACAATCTATCCAATTTAGG-CTTTCTTGATTTATATTCT s panTro5.chr17 16332041 347 + 83181570 ATATTTATTACTATTGGGCACTTAAAGGGGAATGCTTGGAAAAAACTGGGTTGATTTTGCTAGGAATCAACCTTAAA-GGGCAGAAGATTATTGAAATTTGACGCTTTCCATCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGAAAGAGGATCTGAAGGTTTTCTGGTCTGGGACAGGCCACAGCCACTGTGGAACGCAGTGATAATAAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCGAGTTTATACAATCTATCCAATTTAGG-CTTTCTTGATTTGTATTCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16236920 347 + 83442489 ATATTTATTACTATTGGGCACTTAAAGGGGAATGCTTGGAAAAAACTGGGTTGATTTTGCTAGGAATCAACCTTAAA-GGGCAGAAGATTATTGAAATTTGACCCTTTCCATCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGAAAGAGGATCTGAAGGTTTTCTGGTCTGGGACAGGCCACAGCCACTGTGGAACGCAGTGATAATAAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCGAGTTTATACAATCTATCCAATTTAGG-CTTTCTTGATTTGTATTCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083600 347 + 4267968 ATATTTATTACTATTGGGCACTTAAAGGGGAATGCTTGGAAAAAACTGGGTTGATTTTGCTAGGAATCAACCTTAAA-GGGCAGAAGATTATTGAAATTTGACCCTTTCCATCTCAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGAAAGAGGATCTGAAGGTTTTCTGGTCTGGGACAGGCCACAGCCACTGTGGAACACAGTGATAATAAAGGATGGATAAGGCTTGCATGC---TTCCCTTAGCGAGTTTATACAATCTATCCAATTTAGG-CTTTCTTGATTTATATTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2063977 347 - 2193130 GTATTTATTACTATTGGGCACTTAAAGGGGAATGCTTGGAAAGAACTGGGTTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTATTGAAATTTGACCCTTTCCGTCTTAATCTTTGTTCCAAGCAGGAATCTTACTGGGGCTGAAGAGCCTGGTTTTTACCTCGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGAAAGAGGATCTGAAGGTTTTCTGGTCTGGGACAGGTCACAACCACTGTGGAACACAGTGATATTAAAGGATGGATAAGGCTTGCATTC---TCTCCTTAGTGAGTTTATACAATCTTTCCATTTTAGG-CTTTCTTGATTTATATTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131503 347 - 77216781 ATATTTATTACTATTGGTCACTTAAAAGAGATTGCTTGGAAAGAACTGGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTTAGTCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGGTTTTCTGGTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCGAGTTCATACAATCTATGCAATTTAGG-CTTTCTTGATTTATATTCT i rheMac8.chr16 I 2 C 0 s macFas5.chr16 28044336 347 - 80997621 ATATTTATTACTATTGGTCACTTAAAAGAGATTGCTTGGAAAGAACTGGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTCAGTCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCTTAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGGTTTTCTGGTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGGTAAGGCTTGCATGC---TTTCCTTAGCGAGTTTATACAATCTATGCAATTTAGG-CTTTCTTGATTTATATTCT i macFas5.chr16 I 823 C 0 s macNem1.NW_012014910v1 2100958 347 + 10377808 ATATTTATTACTATTGGTCACTTAAAAGAGATTGCTTGGAAAGAACTGGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTCAGTCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTTGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGGTTTTCTGGTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCGAGTTTATACAATCTATGCAATTTAGG-CTTTCTTGATTTATATTCT i macNem1.NW_012014910v1 I 2 C 0 s cerAty1.NW_012006043v1 1986270 347 - 8458610 ATATTTATTACTATTGGTCACTTAAAAGGGATTGCTTGGAAAGAACTGGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTCAGTCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTCTACCTCGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGGTTTTCTGTTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGTGAGTTTATACAATCTATGCAATTTAGG-CTTTCTTGATTTATATTCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64930880 347 + 75148670 ATATTTATTACTATTGGTCACTTAAAAGGGATTGCTTGGAAAGAACTAGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTCAGTCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGCAGAGCTTGGTTTTTACCTCGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGGGTTTCTGGTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCGAGTTTATACAATCTATGCAATTTAGG-CTTTCTTGATTTATATTCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2170599 347 + 4244037 ATATTTATTACTATTGGTCACTTAAAAGGGATTGCTTGGAAAGAACTGGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTCAGTCTTAATCTTTGTTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTCTACCTCGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGGTTTTCTGGTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGCAAGTTTATACAATCTATGCAATTTAGG-CTTTCTTGATTTATATTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2193614 347 + 4569836 ATATTTATTATTATTGGGCACTTAAAAGGGAATGCTTGGAAACAACTGGATTGATTTTGCTAGGAATCAACCTTAAA-GGGTAGAAGATTGTTGAAATTTGACCCTTTCAGTCTTAATCTTTGCTCCAAGCAGGAATCTGACTGGGGCTGAAGAGCTTGGTTTTTACCTCGTCCTTATCTTGCATAAGGAATGCTTTTGTTTAGGAAGAGGATCTGAAGATTTTCTGGTCTGGGATAGGCCACAACCACTGTGGAACACAGTGATATTGAAGGATGGATAAGGCTTGCATGC---TTTCCTTAGAGAGTTTATACAATCTATCCAATTTAGG-CTTTCTTGATTTATATTCT i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22847828 330 + 28711273 AGAGCTATTACTATTGGGCACTTAAAGGGGAATTCTTGGGAAGAACTGGGCTGACTTTTCCAGGAATCAACCTGAAG-GGATAGATGATCTTGGAAATGTGCCCCTTTCCCTCTTAATCTTTGTTCTAAGCAGGAATCTTACTAGGGACAAAGAGCTTGTCTTTTATCTCCTCCTTG-CTTGGATAGAGAATGTTTTTGTTTAGAAAGCAGATCTGA----------------GACAGGTTTCAACCACTGT-GAACCCAGGGGTAATAAGGGACAGGTAAGACGTGCATGC---TTTCCTTATCGAGTTTACGTTATCTTTACTGTTTAGGATTTTTTTGATTTATGCTTC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22114113 317 - 122082543 ATAGATATTATTAATGCT-----------GGATGCTTAGGAAGAACTGGGTTAATTCTGCTGAGAATCAGCCTCAAAGGGGTCCAACGTCGTTGAAACTTATTCCTGTCTCTCTCCATCTT------AAGGAAGAATCTGCCTTAAGATAAAGAGCTTGAATCCTGCCTTCTGC-AGTCTCAGCTGAGGAATGCTTTTGTTTAGAAGG--GGTCCGCGGGCTCTCTGG-CCAGGTCAGGTTACAACCACCA-GGAATACAGAGATAATAAAAGAAGGCAAGAG--TGTGTGT---CCTCTTTA------TCAAACTATTTATACAACTCAGG-ACTTCCTG-CTTATGTTTT i mm10.chr11 C 0 I 529 s dasNov3.JH570468 463602 290 - 852752 ------------------------------------CAGATAGGACTGGGTTAACTTTGCTGGGAACCAGCC------G----------TATTGAAACTCGTCTCTCTCCATCT-GATTTTTGTTTCAAGCAGGACCTGGAATGACACAGAAGAGCCTGGCTCCTATCAAG----GGGTTTGTGGAGGGGGTGCTTTTGTTTGGAGAGAGGATCTGGAGACTTCCTGACTAGGGTCGGGTTACAACCTCTGT-GAGTGAGAGGATGATAAGGGATGGGTGACTCAGGCAGGCATATTTTCTTATCTAGTTAACACTGC---TCCAATTTAGG-CATTTCTGATTTATGATTT i dasNov3.JH570468 C 0 I 8 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=132012.000000 s hg38.chr17_JH159148v1_alt 21286 30 + 88070 AGA-------ATAATGTCT-ATATTTGTTTATTTAAGT s panTro5.chr17 16332388 30 + 83181570 AGA-------ATAATGTCT-ATATTTGTTTATTTAAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237267 30 + 83442489 AGA-------ATAATGTCT-ATATTTGTTTATTTAAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083947 30 + 4267968 AGA-------ATAATGTCT-ATATTTGTTTATTTAAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064324 30 - 2193130 AGA-------ATAATGTCT-ATATTTGTTTATTTAAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131850 26 - 77216781 AGA-------ATAATGTCT-ATA----TTTATTTAAGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044683 26 - 80997621 TGA-------ATAATGTCT-ATA----TTTATTTAAGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101305 26 + 10377808 AGA-------ATAATGTCT-ATA----TTTATTTAAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986617 26 - 8458610 AGA-------ATAATGTCT-ATA----TTTATTTAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931227 26 + 75148670 AGA-------ATAATGTCT-ATA----TTTATTTAAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2170946 22 + 4244037 AGA-------ATAATGTCT-A--------TATTTAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2193961 26 + 4569836 AGA-------ATAATGTCT-ATA----TTTATTTAAGT i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848158 38 + 28711273 GGACATGGAGAAAGAATCTGATAATGGTCCATTTGGGT i otoGar3.GL873537 C 0 I 282 s dasNov3.JH570468 463900 30 - 852752 AGG-------ATGAGTCCG-GTAATGGTCTGTTTTGGT i dasNov3.JH570468 I 8 C 0 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=6228.000000 s hg38.chr17_JH159148v1_alt 21316 1 + 88070 G s panTro5.chr17 16332418 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237297 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083977 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064354 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131876 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044709 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101331 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986643 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931253 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2170968 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2193987 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s dasNov3.JH570468 463930 1 - 852752 G i dasNov3.JH570468 C 0 I 2508 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e otoGar3.GL873537 22848196 282 + 28711273 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=324471.000000 s hg38.chr17_JH159148v1_alt 21317 55 + 88070 GGAATCATTTTAATTTTATTTCTGA-TTTTTAATCCTATATTTTCTGCATTAGTTA s panTro5.chr17 16332419 55 + 83181570 GGAATCATTTTAATTTTATTTCTGA-TTTTTAATCCTATATTTTCTGCATTAGTTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237298 55 + 83442489 GGAATCATTTTAATTTTATTTCTGA-TTTTTAATCCTATATTTTCTGCATTAGTTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4083978 55 + 4267968 GGAATCATTTTAATTTTATTTCTGA-TTTTTAATCCTATATTTTCTGCATTAGTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064355 55 - 2193130 GGAATCATTTTAATTTTATTTCTGA-TTTTTAATCCTATATTTTCTACATAAGTTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131877 56 - 77216781 GGAATCATTTTAATTTTATTTCTGATTTTTTATTCCTGTATTTTCGACATAAGTTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044710 56 - 80997621 GGAATCATTTTAATTTTATTTCTGATTTTTTATTCCTGTATTTTCGACATAAGTTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101332 56 + 10377808 GGAATCATTTTAATTTTATTTCTGATTTTTTATTCCTGTATTTTCGACATAAGTTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986644 56 - 8458610 GGAATCATTTTAATTTTATTTCTGATTTTTTATTCCTGTATTTTCGACATAAGTTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931254 56 + 75148670 GGAATCATTTTAATTTTATTTCTGATTTTTTATTCCTGTATTTTTGACATAAGTTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2170969 56 + 4244037 GGAATCATTTTAATTTTGTTTCTGATTTTTTATTCCTGTATTTTCGACATAAGTTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2193988 56 + 4569836 GGAATCATTTTAATTTTATTTCTGATTTTTTATTCCTATATTTTCTACATAAGTTA i colAng1.NW_012122154v1 C 0 C 0 s dasNov3.JH570468 466439 52 - 852752 GGAATCA---TACTTTTATTTCTAG-TTCTTAATCTTATATTTTCTATATAAGTTA i dasNov3.JH570468 I 2508 I 454 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e otoGar3.GL873537 22848196 282 + 28711273 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=48983.000000 s hg38.chr17_JH159148v1_alt 21372 8 + 88070 TCTCCAAA s panTro5.chr17 16332474 8 + 83181570 CCTCCAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237353 8 + 83442489 CCTCCAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084033 8 + 4267968 CCTCCAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064410 8 - 2193130 CCTCCAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131933 8 - 77216781 CCTCCAAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044766 8 - 80997621 CCTCCAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101388 8 + 10377808 CCTCCAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986700 8 - 8458610 CCTCCAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931310 8 + 75148670 CCTCCAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171025 8 + 4244037 CCTCCAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194044 8 + 4569836 CCTCCAAA i colAng1.NW_012122154v1 C 0 C 0 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e dasNov3.JH570468 466491 454 - 852752 I e otoGar3.GL873537 22848196 282 + 28711273 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=169646.000000 s hg38.chr17_JH159148v1_alt 21380 27 + 88070 CCTACAATTTAATTAAATTTATCCCAG s panTro5.chr17 16332482 27 + 83181570 CCTACAATTTAATTAAATTTATCCCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237361 27 + 83442489 CCTACAATTTAATTAAATTTATCCCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084041 27 + 4267968 CCTACAATTTAATTAAATTTATCCCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064418 27 - 2193130 CCTACAATGTAATTAAATTTATCCCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131941 27 - 77216781 TCTACAATTTAATTAAACTTATCCCAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044774 27 - 80997621 TCTACAATTTAATTAAACTTATCCCAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101396 27 + 10377808 TCTACAATTTAATTAAACTTATCCCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986708 27 - 8458610 TCTACAATTTAATTAAATTTATCCCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931318 27 + 75148670 TCTACAATTTAATTAAATTTATCCCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171033 27 + 4244037 TCTACAATTTAATTAAACTTATCCCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194052 27 + 4569836 TCTGCAATTTAATTAAATTTATCCCAG i colAng1.NW_012122154v1 C 0 C 0 s dasNov3.JH570468 466945 27 - 852752 CCTTAAACTAAATTAACTCTATCCCAG i dasNov3.JH570468 I 454 C 0 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e otoGar3.GL873537 22848196 282 + 28711273 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=1226209.000000 s hg38.chr17_JH159148v1_alt 21407 186 + 88070 CGTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTGTTTCCTGCATATTCACAAGAAAAATCCCAAGCTGTGTTATCTGAACCATCTGTCAGA---AGAGGTTCCAAGGAGAAGGTGTCCAGTGATGAAAGA---------GCCGAGTTTTCCCTATTTTGAATGTAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT s panTro5.chr17 16332509 186 + 83181570 CGTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTGTTTCCTGCATATTCACAAGAAAAATCCCAAGCTGTGTTATCTGAACCATGTGTCAGA---AGAGGTTCCAAGGAGAAGGTGTCCAGTGATGAAAGA---------GCCGAGTTTTCCCTATTTTGAATGTAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAGTCCCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237388 186 + 83442489 CGTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTGTTTCCTGCATATTCACAAGAAAAATCCCAAGCTGTGTTATCTGAACCATGTGTCAGA---AGAGGTTCCAAGGAGAAGGTGTCCAGTGATGAAAGA---------GCCGAGTTTTCCCTATTTTGAATGTAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAGTCCCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084068 186 + 4267968 TGTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTGTTTCCTGCATATTCACAAGAAAAATCCCAAGCTTTGTTATCTGAACCATGTGTCAGA---AGAGGTTCCAAGGAGAAGGTTTCCAGTGATGAAAGA---------GCCGAGTTTTCCCTATTTTGAATGTAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064445 186 - 2193130 CATTTGATCTTAGAATA-----------------------------------------TAGCATTCATTCTTGTTTCCTGCATATTCACAAGAAAAATCCCAAGCTGTGTTATCTGAACCATGTGTCAGA---AGAGGTTCCAGGGAGAAGGTTTCCAGTGATGAAAGA---------GCCGAGTTTTCCCTACTTTGAATGTAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30131968 186 - 77216781 CTTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTATTTCCAGCATATCCACAAGAAAAACCCCAAGCTGCCTTATCTGAACCATGTGTCAGA---AGAGGTTCTAAGGAGAAGGTTTCCAATGATGAAAGA---------GCCGAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044801 186 - 80997621 CTTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTATTTCCAGCATATCCACAAGAAAAACCCCAAGCTGCCTTATCTGAACCATGTGTCAGA---AGAGGTTCTAAGGAGAAGGTTTCCAATGATGAAAGA---------GCCGAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101423 186 + 10377808 CTTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTATTTCCAGCATATCCACAAGAAAAACCCCAAGCTGCCTTATCTGAACCATGTGTCAGA---AGAGGTTCTAAGGAGAAGGTTTCCAATGATGAAAGA---------GCCAAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986735 186 - 8458610 CTTTTGATCTTAGAACA-----------------------------------------TAACATTCATTCTTGTTTCCAGCATATCCACAAGAAAAACCTCAAGCTGCGTTATCTGAACTATGTGTCAGA---AGAGGTTCTAAGGAGAAGGTTTCCAGTGATGAAAGA---------GCCGAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931345 186 + 75148670 CTTTTGATCTTAGAATA-----------------------------------------TAACGTTCATCCTTGTTTCCAGCATATCCACAAGAAAAACCCCAAGCTGCGTTACCTGAACCATGTGTCAGA---AGAGGTTCTAAGGAGAAGGTTTCTAGTGATGAAAGA---------GCCGAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171060 186 + 4244037 CTTTTGATCTTAGAATA-----------------------------------------TAACATTCATTCTTATTTCCAGCATATCTACAAGAAAAACCCCAAGCTGTGTTATCTGAACCATGTGTCAGA---AGAGGTTCTAAGGAGAAGTTTTCCAATGATGAAAGA---------GCCGAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAAATTAATCCCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194079 186 + 4569836 CTTTTGATCTTAGAATA-----------------------------------------TAACAGTCATTCTTGTTTCCAGCATATCCACAAGAAAAACCCCAAGCTGCGTTATCTGAACCATGTGTCAGA---AGAGGTTCTAAGGAGAAGTTTTCCAGTGATGAAAGA---------GCCGAGCTTTCCCTACTTTGAATGGAG----GAAACA----CAGGCTGGTTTTTCTGAGATTAATCCCT i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848478 229 + 28711273 AATTTGACCTTGAAATAACCTGCTGTCACTGCTGAAGATTTTCTCATTCTCCTTAGATTAACCTTCGTCCTCATTTCTAGCACATACATAATAAATATCTCAAGAGGAATTTTCC-AACCAGGTGCCAAA---AGACATTCCCAGGAGAAGGTTTCTACTGATGAAAGA---------GCTGAGCTTTCTCTGCTTTTAATGGAGAACCAAGTCA----GTGGCTGG-TTTTCTGAAATTAACCCCT i otoGar3.GL873537 I 282 C 0 s dasNov3.JH570468 466972 198 - 852752 AGTTTGGGTTTGGAGTC-----------------------------------------AAACATTCATTCTTGTTTCAGGCACAAACACAAGGAAAATCCAAATTTGCACTTTCTGAACCATGTGCCATGCTTGAAGATCCCAAAG---AGGTTTCCTATTATAAAAAACAAAACAACACTGTGTTTTCTCTACTGTGAAGGGAG----GAAACAGACTGAGACCAG-TTTACTGAAATTAATCCCT i dasNov3.JH570468 C 0 I 911 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=215268.000000 s hg38.chr17_JH159148v1_alt 21593 30 + 88070 GTTCTTTCCATAACAATATTACATTGCACT s panTro5.chr17 16332695 30 + 83181570 GTTCTTTCCATAACAATATTACATTGCACT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237574 30 + 83442489 GTTCTTTCCATAACAATATTACATTGCACT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084254 30 + 4267968 GTTCTTTCCATAACAATATTACATTGCACT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064631 30 - 2193130 GTTCTTTCCATAACAATATTACATTGCACT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132154 30 - 77216781 GTTCTTTCCATAACAATATTACATTGCACT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28044987 30 - 80997621 GTTCTTTCCATAACAATATTACATTGCACT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101609 30 + 10377808 GTTCTTTCCATAACAATATTACATTGCACT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986921 30 - 8458610 GTTCTTTCCATAACAATATTACATTGCACT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931531 30 + 75148670 GTTCTTTCCATAACAATATTACATTGCACT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171246 30 + 4244037 GTTCTTTCCATAACAATATTACATTGCACT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194265 30 + 4569836 GTCCTTTCTATAACAATATTACATTGCACT i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848707 30 + 28711273 GTTCTCTCTGTAACAGTGTTGTGTTGCACT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 468081 25 - 852752 GTTCTTTCCCTATCAATACTTCACT----- i dasNov3.JH570468 I 911 C 0 e mm10.chr11 22114430 529 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=519767.000000 s hg38.chr17_JH159148v1_alt 21623 65 + 88070 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAATTA s panTro5.chr17 16332725 65 + 83181570 AGAGAGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAATTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237604 65 + 83442489 AGAGAGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAATTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084284 65 + 4267968 AGAGGGCCTAAGCTAGGGATTGTCTTTTCTGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064661 65 - 2193130 AGAGGGCCTAATCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTCACTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132184 65 - 77216781 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28045017 65 - 80997621 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101639 65 + 10377808 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1986951 65 - 8458610 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931561 65 + 75148670 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATGAACTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171276 65 + 4244037 AGAGGGCCTAACCTAGGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194295 65 + 4569836 AGAGGGCCTAACCTACGGATTGTCTTTTATGTGTAATTCAAATTCTAAGAAGAATAAATTAACTA i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848737 65 + 28711273 ACAGAGCTTAACATAGGGATTGTCTTTTCTGTTTGATTCAAATCATAAGGAGAATAAATTCACTA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22114959 65 - 122082543 AGAGAAGCCAACCCAGAGATGATCTTTCATGTTTGATTTAAATGGTAAGAACACTAATCTAATTA i mm10.chr11 I 529 C 0 s dasNov3.JH570468 468106 65 - 852752 AGAGGATCTAACTTAGGGATTGTCTTCTATGTTAAACTCAAATCATAAGAAGAGGAATTTTGTTA i dasNov3.JH570468 C 0 I 28207 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=67120.000000 s hg38.chr17_JH159148v1_alt 21688 11 + 88070 -----TAGTCCAATCA s panTro5.chr17 16332790 11 + 83181570 -----TAGTCCAATCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237669 11 + 83442489 -----TAGTCCAATCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084349 11 + 4267968 -----TAGTCCAATCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064726 11 - 2193130 -----TAGTCCAATCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132249 11 - 77216781 -----TAGTCCAGTCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28045082 11 - 80997621 -----TAGTCCAGTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101704 11 + 10377808 -----TAGTCCAGTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1987016 11 - 8458610 -----TAGTCCAGTCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931626 11 + 75148670 -----TAGTCCAGTCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171341 11 + 4244037 -----TAGTCCAGTCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194360 11 + 4569836 -----TAGTCCAGTCA i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848802 11 + 28711273 -----TAGTGTAATTG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22115024 11 - 122082543 -----TGGTAGAGTCT i mm10.chr11 C 0 C 0 s dasNov3.JH570468 344938 16 + 852752 TGAGGACATGTAAGCA i dasNov3.JH570468 n 28207 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21462649 107 + 61074082 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=610101.000000 s hg38.chr17_JH159148v1_alt 21699 87 + 88070 CCACTATAACTCACAGCA-GGGAGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAGGTTGGTGATGTTAGATTATAATTAGATGA s panTro5.chr17 16332801 87 + 83181570 CCACTATAACTCACAGCA-GGGAGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAGCAAGTTGGTGATGTTAGATTATAATCAGATGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237680 87 + 83442489 CCACTATAACTCACAGCA-GGGAGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAGCAAGTTGGTGATGTTAGATTATAATCAGATGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084360 87 + 4267968 CCACTATAACTCACAGCA-GGGAGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAATCAGATGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064737 87 - 2193130 CCAATATAACTCACAGCA-GGGAGG---AAGGAAGAAATATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAATCAGATGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132260 87 - 77216781 CCACTGTAACTCACAGCA-GGGGGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAACCAGATGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28045093 87 - 80997621 CCACTGTAACTCACAGCA-GGGGGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAACCAGATGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101715 87 + 10377808 CCACTGTAACTCACAGCA-GGGGGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAAGCAGATGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1987027 87 - 8458610 CCACTGTAACTCACAGCA-GGGGGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAACCAGATGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931637 87 + 75148670 CCACTGTAACTCACAGCA-GGGGGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAACCAGATGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171352 87 + 4244037 CCACTATAACTCACAGCA-GGGGGG---AAGGAAGAAGTATG--TGGTG----TGTCACTCATAACAAGTTGGTGATGTTAGATTATAACCAGATGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194371 88 + 4569836 CCACTATAACTCACAGCAGGGGGGG---AAGGAAGAAGTGTG--TGGTG----TGTCACTCATAACAAGCTGGTGATGTTAGATTATAACCAGATGG i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848813 73 + 28711273 CTAGTATAATTTACAGCA-GGAGAG---GCCTAA--------------------GCCACTTATATCAAGTTGGCGATGTTAGATTATAACTTGTTAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22115035 85 - 122082543 CCAATAT-----GCTATA-GTGAAG---ATGGAA-AGTTATA--TGATGTGCATGTGAGTTATAAGAAGTTAGTGATACTAGATTATCATCTAATGG i mm10.chr11 C 0 I 334 s canFam3.chr9 21462756 85 + 61074082 CTAGTGCAACTCATG----GGAGGG---AAGGAAGGACTATGATGGGTG----TGTTATTGATAACAAGCTGCTGATGTTAGATTATAACT-GGTGA i canFam3.chr9 I 107 C 0 s dasNov3.JH570468 344954 76 + 852752 TCAGCAC-ATTCATTGAA-GGGAAGCTTGGGGAACATGTGCT--TAATG----GATCACACATGACAAACTGACGATACCAGAT------------- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=382526.000000 s hg38.chr17_JH159148v1_alt 21786 56 + 88070 ACAAAGACACACACAAAATCATAAGAGTCAACCCAACACTCTGATGATAATTCTAC s panTro5.chr17 16332888 56 + 83181570 ACAAAGACACACACAAAATCATAAGCGTCAACCCAACACTCTGATGATAATTCTAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237767 56 + 83442489 ACAAAGACACACACAAAATCATAAGCGTCAACCCAACACTCTGATGATAATTCTAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084447 56 + 4267968 GCAAAGACACACACAAAATCATAAGAGTCAACCCAACACTCTGATGATAATTCTAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064824 56 - 2193130 ACAAAGACACACACAAAATCATAAGAGTCAACCCAACACTCTGATGACAATTCTAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132347 56 - 77216781 ACAAAGACACACGCAAAATCATTAGAGTCAACCCAACACTCTGGCGATAATTCTAC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28045180 56 - 80997621 ACAAAGACACACGCAAAATCATTAGAGTCAACCCAACACTCTGGCGATAATTCTAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101802 56 + 10377808 ACAAAGACACACGCAAAATCATTAGAGTCAACCCAACACTCTGGCGATAATTCTAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1987114 56 - 8458610 ACAAAGACACACGCAAAATCATTAGAGTCAACCCAACACTCTGGCGATAATTCTAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931724 56 + 75148670 ACAAAGACACACGCAAAATCATTAGAGTCAACCCAACACTCTGGCGATAATTCTAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171439 56 + 4244037 ACGAAGACACACACAAAATCATTAGAGTCAACCCAACACTCTGGCGATAATTCTAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194459 56 + 4569836 ACAAAAACATACACAAAATCATAAGAGTCAACCCGACACTCTGGCAACAATTCTAC i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848886 51 + 28711273 AGAAAGATA-----GAAAAAATAAAATCTGACGCAACATTCTGATGATAATTCCAT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22115454 48 - 122082543 acacacacacacacacacacacaGGG--------AACATTCTGATGACAATTTCAC i mm10.chr11 I 334 C 0 s canFam3.chr9 21462841 45 + 61074082 ACAAAGACACAAAAAGA-----TAGGGTCAATGCAACATTTTGATGATAA------ i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 345030 53 + 852752 ACATAAACACAT---AAAGCTTGAGGGCCAAGGCAACTTCCTCAAGACAGAACTAC i dasNov3.JH570468 C 0 n 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=2400530.000000 s hg38.chr17_JH159148v1_alt 21842 379 + 88070 ----------------------------ATTATCAC--------------TATGATGACAACTCTGT--------ATCACACAGTAATC--TT---TTTTTAAAGACTTAGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAAGTTATC--CTGACATGCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAATATAAATTTCATCATGGAT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTA--------------CAGTCAG------------ATATCAT----CCAAGACTTGGAACCT--ATGTTCAAAACgatcaaaa------ccaaattatgtagcgtcacctta-aaa-agatgtatgcattcaaagtctgaggaattgattcaagtctaattgaaga---tgtaa-aaatgtgaaagttaaattagagtattgttgaaccatgg s panTro5.chr17 16332944 379 + 83181570 ----------------------------ATTATCAT--------------TATGATGACAACTCTGT--------ATCACACAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAAGTTATC--CTGACATGCAA-TAGAAATA---TTACAAATA--GTCAGCAGATATGATGGTAGACATGAACTAAACCAAATATAAATTTCATCATGGAT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTA--------------CAGTCAG------------ATATCAT----CCAAGACTTGGAACCT--ATGTTCAAAACgatcaaaa------ccaaattatgtagcgtcacctta-aaa-agatgtatgcattcaaagtctgaggaattgattcaagtctaattgaaga---tgtaa-aaatgtgaaagttaaattagagtattgttgaaccatgg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16237823 379 + 83442489 ----------------------------ATTATCAT--------------TATGATGACAACTCTGT--------ATCACACAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAAGTTATC--CTGACATGCAA-TAGAAATA---TTACAAATA--GTCAGCAGATATGATGGTAGACATGAACTAAACCAAATATAAATTTCATCATGGAT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTA--------------CAGTCAG------------ATATCAT----CCAAGACTTGGAACCT--ATGTTCAAAACgatcaaaa------ccaaattatgtagcgtcacctta-aaa-agatgtatgcattcaaagtctgaggaattgattcaagtctaattgaaga---tgtaa-aaatgtgaaagttaaattagagtattgttgaaccatgg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084503 382 + 4267968 ----------------------------ATTATCAT--------------TATGATGACAACTCTGT--------ATCACACAATAA-C--CT---TTTTTAAAGACTTTGTGAGATAAGAGAGAAAGATAAA----CAAAGCG---------CAAGTTATC--CTGACATGCAA-TAGAAATA---TTACAAATA--GTCAATAGAAACGATGGTAGACATGAACTAAACCAAATATAAATTTCATCATGGAT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTA--------------CAGTCAG------------ATATCAT----CCATGACTTGGAACCT--ATGTTCAAAATgatcaaaa------ccaaattatgtagcgtcacctta-aaa-agatgtatgcattcaaagtctgaggaattgattcaagtctaattgaaga---tgtaa-aaatgtgaaagttaaattacagtattgttgaaccatgg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2064880 378 - 2193130 ----------------------------CTTATCAT--------------TATGATGACAACTCTGT--------ATCACACAGTAATC--TT---TTTTTAAAGACTTTGTGAGATAAGAGAGAAAGATAAA----CAAAGCC---------CAAGTTATC--CTGACATGCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAACATAAATTTCATCACGGAT-G--CTCACCA--------TGTAATGGTGTGAATGAGAATGCATT-----------GATA--------------CAGTCAG------------ATATCAT----CCAAGACTTGGAACAT--ACGTTCAAAATgatcaaaa------ccaaattatgtagcgtcacctta-aaa-agatgtatgtattcaaagtctgaggaattgattcaagtctaattgaaga---tgtaa-aaatgtga-----gacttagagtattgttgaaccatgg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132403 380 - 77216781 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAA---------------GCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAAACATGAACTAAACCAAATATGAATTTCATCATGGGT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATCAGTGCATGATATCAGTCAG------------ATATCAT----CTAAGACTTGGAATCT--ATGTTCAAAATGATCAAAA------CTAAATTATGTAGCGCCACGTTA-AAA-AGATGGATATATTCAAAGTCTGAGGAATTGATTCAAGTCTAATTGAAGA---TGTAA-AAATGTGAAACTTAAATTAGGGTATTGTTGAACCACAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28045236 380 - 80997621 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTAAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAA---------------GCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAATATGAATTTCATCATGGGT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATCAGTGCATGATATCAGTCAG------------ATATCAT----CTAAGACTTGGAATCT--ATGTTCAAAATGATCAAAA------CTAAATTATGTAGCGCCACGTTA-AAA-AGATGGATATATTCAAAGTCTGAGGAATTGATTCAAGTCTAATTGAAGA---TGTAA-AAATGTGAAACTTAAATTAGGGTATTGTTGAACCACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2101858 380 + 10377808 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAA---------------GCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAATATGAATTTCATCATGGGT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATCAGTGCATGATATCAGTCAG------------ATATCAT----CTAAGACTTGGAATCT--ATGTTCAAAATGATCAAAA------CTAAATTATGTAGCGCCACGTTA-AAA-AGATGGATATATTCAAAGTCTGAGGAATTGATTCAAGTCTAATTGAAGA---TGTAA-AAATGTGAAACTTAAATTAGGGTATTGTTGAACCACAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1987170 380 - 8458610 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAA---------------GCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAACATGAATTTCATCATGGGT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATCAGTGCATGATATCAGTCAG------------ATATCAT----CTAAGACTTGGAATCT--ATGTTCAAAATGATCAAAA------CCAAATTATGTAGCGCCACGTTA-AAA-AGATGGATATATTCAAAGTCTGAGGAATTGATTCAAGTCTAATTGAAGA---TGTAA-AAATGTGAAACTTAAATTAGGGTATTGTTGAACCACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64931780 380 + 75148670 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAA---------------GCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAACATGAATTTCATCATGGGT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATAAGTGCATGATATCAGTCAG------------ATGTCAT----CTAAGACTTGGAATCT--ATGTTCAAAATGATCAAAA------CCAAATTATGTAGCGCCACGTTA-AAA-AGATGGATATATTCAAAGTCTGGGGAATTGATTCAAGTCTAATTGAAGA---TGTAA-AAATGTGAAACTTAAATTAGGGTATTGTTGAACCACAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171495 380 + 4244037 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTTAAAGACTTTGTGAGATA----AGAAAGATAAA----CAAAGCC---------CAA---------------GCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAACATGAATTTCATCATGGGT-G--CTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATCAGTGCATGATATCAGTCAG------------ATATCAT----CTAAGACTTGGAATCC--ATGTTCAAAATGATCAAAA------CCAAATTATGTAGCGCCACGTTA-AAA-AGATGGATATATTCAAAGTCTGAGGAATTGATTCAAGTCTAATTGAAGA---TGTAA-AAATGTGAAACTTAAATTAGGGTATTGTTGAACCACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194515 395 + 4569836 ----------------------------GTTATCAT--------------TATGATGACAATTCTGT--------ATCACAGAGTAATC--TT---TTTTTAAAGACTTTGCGAGATA----AGAAAGAGAAA----CAAAGCC---------CAAGCTATC--CTGACATGCAA-TAGAAATA---TTACAAATA--GTCAACAGATATGATGGTAGACATGAACTAAACCAAACATGAATTTCATCATGGGT-GCTCTCACCA--------TGCAATGGTGTGAATGAGAATGCATT-----------GGTATCAGTGCATAATATCAGTCAG------------ATATCAT----CTAAGATTTGGAATCT--ATGTTCAAAATgatcaaaa------ctaaattatgtagcaccacctta-aaa-agatggatatattcaaagtctgaggaattgattcaagtctaattgaaga---tgtaa-aaatgtgaaacttaaattagggtattgttgaaccacgg i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22848937 383 + 28711273 ----------------------------ATTATC-----------------ATGATGATAATTCTAT--------AGCACTGAGTATTCTTTT---TTTTTAAAGTCATTGAGAGAT-----AGACAGCTATA----TAACACTTCACCCAAACAAGTTGTC--CTGAAATACAATTATAAATA---TCATAAATG--ACTAACAGATATTACAGTGGAAATGAACTAAAC----TGTCAACTTCATTGTGGAA-A--CTTACAA--------TGTGATGGCATGA---AGGATGCATG-----------ACTA----------------GTTGG------------GTACTATAGACCCAAGACTTGGAATTc--acattaaaaaggatcagaa------taaaattaggtaacgtcagctta-aaagagaaggatatcttcgaagtcggaggaattaattcagatctgattgacaa---tacac-aaacatgaaacttacagaaaggtgccattgtaccatag i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22115502 361 - 122082543 ----------------------------ATTATCAT--------------TGTAATAATAGTTCTAC--------CTCACTGAG--ATT--TTTCATTTCTGATTACCTTAGAAGATAAG--AGAAAGAGTAA----TAAACCC---------C-----------------ACAT-TTGAAATACACTTAAAAATACTGTGAAGAGATA---------GTATGAGCAATACCAAA-ATAAATTCCACCATGGGT-A--TTCGTGG--------CACAGTGGTGCTAATGAAATGTCACTTCAAGTTGGGAGCTA--------------CAGTTAG------------ATGCTAT----TTCTGACTTGGAATTT--CCCTTATAAAAGACCAAAA------CCAAACTATGTAAAGTCCATTTA-AGA-AAA--GACAGCTTGAAAATCTGAAGAATTGACAGAGACTTGACTAAGAA---TATAA-AAATGTGAAACT----------TATTGACGAAGCATGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21462886 364 + 61074082 ---------------------------------------------------------------CTAC--------GTCACTGAAGATTC--TT---TTTTTTTTTATTGGTAGAGAAA----ATAAAAGTAAA----TAAATTC---------AAAGTCATT--CTGAAATACAATTAGAAATG---TCATAAGTA--G-CAACAGATATTATGGTAGAAGTGAATGAAA----ACATAAATGTCATCATGAAT-G--TTCATAG--------TGCAGTGGTGTGAACAAAGATTCAT------------GACA---------------AGTTAGGACTACAGAGCCATACTG-----CTGAGCCTCAGAATCT--ACATTAAGAAGGACCCAAA------CTAAATGatgtgaagtcacctta-aaa-agaaggatatcttcaaagtctgagcaattgattcagatctgattgaata---tgtaagaaatatgtagcttaactgagagtattggtgaatcaagg i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 496378 418 - 852752 ATTTAGAACATGAAAGTAAGAGTTGGGAAATATTGTGAGTTACCTGAATATATAATTAAACATGTGTGATGTATGATATCCCAGTTGGC--TC---TTTTTAAAAaattaattaatta----attaattTAAATGACTAGATCA---------CAAGGAATCAGTTGGCTCTTAA-ATGACATG---GCATAAAAA-----AACCCA-------------GTGAACTCTTCC-------ACTAACATCTTGGATAG--GTCACAGTATGGCACTATAAAGGTGCTAATAAAACCACaaa-----------ggag--------------agaaaaa------------agattgc----c-----ctttgaatgtgaatcttaaaaatgttataaaagagagtcaatttatatagcgtcaccttataga-aaaacaaggccttcaagattagcagagtttacattagcctggttgaagattttgtaa-aaa-atgaatgt---------gtatttcttaactaggg i dasNov3.JH570468 I 28207 T 26659 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=5263155.000000 s hg38.chr17_JH159148v1_alt 22221 749 + 88070 aaaatcagg-gttaagacaagtgctggggtgaatgttggcagtgtgcctccaggcaactgcccacag-------gagag---------------------gg---------------aCTATGAATTTTC----------------------------------AATTTCCATTGGTGAGAACTATTGTGAA------ACGAACATGTCAAATG---CCATTCAACATTTAGTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGTTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaataggcatccttgctttttgggcttggctaacaggtgtctgctctaagacgtggcttaacc-cttagaatgtaagcaaaatcaggtctctgagtctgcaaggctaaaggccagaaccaggtacatttatcaagggttgtgaattctaccttgcatgcc-attggggagatagtcCtta--------------ttttttttttttttttA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTACGGAGTTCAGAGA---ATAACAACCTGTT-AGCAATTAATTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATGGAaggaatcctaataaa-cttcctgccatgt-gttgccagatccaatgcttaagtgtctagtaaat-ggaaa---------ttcatacacccggg----gtggtct----gttccattcctaggaagatcttttaaagagcttttAGAGAATT---TCTGTACTCACTCTAGACCCCCTGAACttt s panTro5.chr17 16333323 746 + 83181570 aaaatcagg-gttaagacaagtgctggggtgaatgttggcagtgtgcctccaggcaactgcccacag-------gagag---------------------gg---------------actatgaattttc----------------------------------aatttccattggtgagaactattgtgaa------atgaacatgtcaaatg---ccattcaacatttagtttatataacttcctgt------------------------ctgattccttactcaTGTGGTGGTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaataggcatccttgctttttgggcttggctaacaggagtctgctctaagacgtggcttaacc-cttagaatgtaagtaaaatcaggtctctgagtctgcaaggctaaaggccagacccaggtacatttatcaagggttgtgaattctaccttgcatgcc-tttggggagatagtcCTTA-----------------TTTTTTTTTTTTTA---TCTCCAAGGGAAAGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGGAGTTCAGAGA---ATAACAACCTGTT-AGCAATTAATTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATGGAaggaatcctaataaa-cttcctgccatgt-gttgccagatccaatgcttaagtgtctagtaaat-ggaaa---------ttcatacacccggg----gtggtct----gttccattcctaggaagatcttttaaagagcttttAGAGAATT---TCTGTACTCACTCTAGACCCCCTGAACttt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16238202 745 + 83442489 aaaatcagg-gttaagacaagtgctggggtgaatgttggcagtgtgcctccaggcaactgcccacag-------gagag---------------------gg---------------aCTATGAATTTTC----------------------------------AATTTCCATTGGTGAGAACTATTGTGAA------ATGAACATGTCAAATG---CCATTCAACATTTAGTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGGTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaataggcatccttgctttttgggcttggctaacaggagtctgctctaagacgtggcttaacc-cttagaatgtaagtaaaatcaggtctctgagtctgcaaggctaaaggccagacccaggtacatttatcaagggttgtgaattctaccttgcatgcc-tttggggagatagtcCTTA------------------TTTTTTTTTTTTA---TCTCCAAGGGAAAGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGGAGTTCAGAGA---ATAACAACCTGTT-AGCAATTAATTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATGGAaggaatcctaataaa-cttcctgccatgt-gttgccagatccaatgcttaagtgtctagtaaat-ggaaa---------ttcatacacccggg----gtggtct----gttccattcctaggaagatcttttaaagagcttttAGAGAATT---TCTGTACTCACTCTAGACCCCCTGAACttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4084885 750 + 4267968 aaaatcagg-gttaagacaagtgctggggcgaatgttggcagtgtcccgccaggcaactgcccacag-------gagag---------------------gg---------------actatgaattttc----------------------------------aatttccattggtgagaactattgtgaa------atgaacatgtcaaatg---ccattcaacatttagtttatataacttcctgt------------------------ctgattccttactcaTGTGGTGGTTTGGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaataggcatccttgctttttgggcctggctaacaggagtctgctctaagatgtggcttaacc-cttagaatgtaagtaaaatcaggtctctgagtctgcaaggctaaaggtcagactcaggtacatttatcaagggttgtgaattctaccttgcatgcc-tttagggagatagtcCTTA--------------TTATTATTATTTTTTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTACGGAGTTCAGAGA---ATAACAACCTGTT-AGCAATTAATTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTCAAGGCATGGAAGGAATCCTAATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGCGTCTAGTAAAT-GGAAA---------TTCATACACCCGGG----GTGGTCT----GTTCCATTCCTAGGAAGATCTTTTAAAGAGCTTTTAGAGAATT---CCTGTACTCACTCTAGACCCCCTGAACttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2065258 739 - 2193130 aaaattagg-gttaagccaagtgctggggcgaatgttggcagtgccccaccaggcaactgcccacag-------gagag---------------------gg---------------aCTATGGATTTTC----------------------------------AATTTCCACTGGTGAGAACTATTGTGAA------ATGAACATGTCAAATG---CCATTCAACATTTAGTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGGTTCAGAAGTTCCTTTTAC--TTAATTCTTCtg--------taatttaataaataggggtccttgctttttgggcttggctaacaggagtctgctctaagatgtggcttagcc-cttagaatgtaagtaaaatcagttctctgagtctgcaaggtt-aaggccagacccagatacatttatcaa-ggttgtgaattctaccttgcatgcc-tttggggagacagtcCTTA----------------------TTTTTTTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTGTGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGGAGTTCAGAGA---ATAACAACCTGTT-AGCAATTAATTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGACCTCAAAGAATCTC-AGGCATGGAAGGAATCCTAATAAA-CTTCCTGGCATGT-GTTGCCAGATCCAATGCTTAAGTGCCTAGTAAAT-GGAAA---------TTCATACACCCGGG----GTGGTCT----GTTCCATTCCTAGGAAGATCTTTTAAAGAGATTTTAGAGAGTT---TCTGTACTCACTCTAGACCCCCTGAACttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30132783 752 - 77216781 AAAATCAGG-GTTAAGACAAGTGCTggggtgaatgttggcagtgccccaccaagcaactgcccatag-------gagag---------------------gg---------------aCTATGAATTTTC----------------------------------ACATTCCATTGGTGAGAACTGTTGTGAA------ATGAACATGTCAAGTG---TCATTCAACATTTACTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGGTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaatagacatccttgctttatgggcttggctaacaggagtctgctctaagaggtggcttaacc-cttagaatgtaaataaaatcaggtctctgagtctgcaaggctaaaggccagacccagatacatttatcaa-ggttgtgaattctaccttgcatgcc-tttggggagacagtcCTTA----------TATTTTTTTAATTTATTTTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGAAGTTTAGAGA---ATAACAACCTGTT-AGCAATTAGCTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATCGAAGGAATCCTGATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCTGGG----GTGGTCT----GTTCCATTTCTAGGAAAATCTTTTTAAGGGCTTTTGGAGAGTT---TCTGTACTCACCCTAGACCCCCTGAACttt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28045616 754 - 80997621 AAAATCAGG-GTTAAGACAAGTGCTggggcgaatgttggcagtgccccaccaagcaactgcccatag-------gagag---------------------gg---------------actatgaattttc----------------------------------acattccattggtgagaactgttgtgaa------atgaacatgtcaagtg---tcattcaacatttactttatataacttcctgt------------------------ctgattccttactcaTGTGGTGGTTTAGAAGTTTCTgttac--ttaattctcctg--------taatttaataaatagacatccttgctttatgggcttggctaacaggagtctgctctaagaggtggcttaacc-cttagaatgtaaataaaatcaggtctctgagtctgcaaggctaaaggccagacccagatacatttatcaa-ggttgtgaattctaccttgcatgcc-tttggggagacagtcCTTATT--------TTTTTTTTTAATTTATTTTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGAAGTTTAGAGA---ATAACAACCTGTT-AGCAATTAGCTAATCAAATAATGATGGGGCAAGACA--GCGTGTTTAAGGATCTCAAAGAATCTC-AGGCATCGAAGGAATCCTGATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCTGGG----GTGGTCT----GTTCCATTTCTAGgaaaatctttttaagggcttttggagagtt---tctgtactcaccctagaccccctgaacttt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2102238 752 + 10377808 AAAATCAGG-GTTAAGACAAGTGCTggggcgaatgttggcagtgccccaccaagcaactgcccatag-------gagag---------------------gg---------------aCTATGAATTTTC----------------------------------ACATTCCATTGGTGAGAACTGTTGTGAA------ATGAACATGTCAAGTG---TCATTCAACATTTACTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGGTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaatagacattcttgctttatgggcttggctaacaggagtctgctctaagaggtggcttaacc-cttagaatgtaaataaaatcaggtctctgagtctgcaaggctaaaggccagacccagatacatttatcaa-ggttgtgaattctaccttgcatgcc-tttggggagacagtcCTTA----------TTTTTTTTTAATTTATTTTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGAAGTTTAGAGA---ATAACAACCTGTT-AGCAATTAGCTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATCGAAGGAATCCTGATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCTGGG----GTGGTCT----GTTCCATTTCTAGGAAAATCTTTTTAAGGGCTTTTGGAGAGTT---TCTGTACTCACCGTAGACCCCCTGAACttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1987550 745 - 8458610 AAAATCAGG-GTTAAGACAAGTGCTggggcgaatgttggcagtgccccaccaagcaactgcccacag-------gagag---------------------gg---------------actatgaattttc----------------------------------aagttccattggtgagAACTGTTGTGAA------ATGAACATATCAAGTG---TCATTCAACATTTACTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGGTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaatagacatccttgctttatgggcttggctaacaggagtctgctctaagaggtggcttaacc-cttagaatgtaaataaaatcaggtctctgagtctacaaggctaaaggccagacccagatacatttatcaa-ggttgtgaattctaccttgcatgccttttggggagacagtcCtta----------ttatttatttatttatttTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTATGAAGTTTAGAGA---ATAAC---------AGCAATTAGCTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATGGAAGGAATCCTGATAAA-CTTCCTGCCATAT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCTGGG----GTGGTCT----GTTCCATTTCTAGGAAAATCTTTTTAAGGGCTTTTGGAGAGTT---TCTGTACTCACCCTAGACCCCCTGAACttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64932160 757 + 75148670 AAAATCAGG-GTTAAGACAAGTGCTggggcgaatgttggcagcgccccaccaagcaactgcccacag-------gagag---------------------gg---------------actatgaattttc----------------------------------acattccattggtgagaactgttgtgaa------atgaacatgtcaagtg---tcattcaacatttactttatataacttcctgt------------------------ctgattccttactcaTGTGGTGGTTTAGAAGTTCCTgttac--ttaattctcctg--------taatttaataaatagacatccttgctttatgggcttggctaacaggagtctgctctaagaggtggcttaacc-cttagaatgtaaataaaatcaggtctctgagtctgcaaggctaaaggccagacccagatacatttatcaa-ggttgtgaattctaccttgcatgccttttggggagacagtcCttatt------atttatttatttatttatttTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATACTTTCTTTAAAGCATTATGTATGTGAATGCTTATGAAGTTTAGAGA---ATAACAACCTGTT-AGCAATTAGCTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATGGAAGGAATCCTGATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCTGGG----GTGGTCT----GTTCCATTTCTAGGAAAATCTTTTTAAGGGCTTTTGGAGAGTT---TCTGTACTCACCCTAGACCCCCTGAACttt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2171875 752 + 4244037 AAAATCAGG-GTTAAGACAAGTGCTggggcgaatgttggcagtgccccaccaagcaactgcccacag-------gagag---------------------gg---------------actatgaattttc----------------------------------acattccattggtgagaactgttgtgaa------atgaacatgtcaagtg---tcattcaacatttactttatataacttcctgt------------------------ctgattccttactcaTGTGGTGGTTTAGAAGTTCCTGTTAC--TTAATTCTCCtg--------taatttaataaatagacatccttgctttatgggcttggctaacaggagtctgctctaagaggtggtttaacc-cttagaatgtaaataaaatcaggtctctgagtctgcaaggctaaaggccagacccagattcatttatcaa-ggttgtgaattctaccttgcatgcc-tttggggagacagtcCtta----------ttttttatttatttatttTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGTATTATGTATGTGAATGCTTATGAAGTTTAGAGA---ATAACAACCTGTT-AGCAATTAGCTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATCTCAAAGAATCTC-AGGCATGGAAGGAATCCTGATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCTGGT----GTGGTCT----GTTCCATTTCTAGGAAAATCTTTTTAAGGGCTTTTGGAGAGTT---TCTGTACTCACCCTAGACCCCCTGAACTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2194910 759 + 4569836 aaaatcagg-gttaagacaagtgctggggcggatgttggcagtgccccaccaagcaactgcccacag-------gagag---------------------gg---------------aCTATGAATTTTC----------------------------------ACGTTCCATTGGTGAGAACTGTTGTGAA------ATGAACATGTCAAGTG---TCATTCAACATTTACTTTATATAACTTCCTGT------------------------CTGATTCCTTACTCATGTGGTGGTTTAGAAGTTCCTGTTAC--TTAGTTCTCCTGTAATTTAAtaatttaataaataggcatccttgctttatgggcttggctaacagaagtctgctctaagaggtggcttaacc-cttagaatgtaaataaaatcaggtctctgagtctgaaaggctaaaggccagaccctgatacatttatcaa-ggttgtgaattctaccttgcatgcc-tttggggagacaatcCTTA----------TT-TTTATTTATTTATTTTTA---TCTCCAAGGGAATGCCAATTATCATGACAGTGTGTATGCTTTCTTTAAAGCATTATGTATGTGAATGCTTGTGAAGTTTAGATA---ATAAGAACCTGTT-AGCAAGTAGCTAATCAAATAATGATGGGGCAAGACA--GAGTGTTTAAGGATATCAAAGAATCTC-AGGCATGGAAGGAATCCTGATAAA-CTTCCTGCCATGT-GTTGCCAGATCCAATGCTTAAGTGTGTAGTAAAT-GGAAA---------TTCATACACCAGGG----GTGGTCT----GTTCCATTTCTAGGAAAATCTTTTTAAGGGCTTTTGGAGAGTT---TCTATACTCACTCTAGACCCCCTGAACAtt i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22849320 815 + 28711273 aaacccaga-gttaagacaaatgctgaggccaatgttagcagtgcccagacaagaaactgcccacag-------gagag---------------------ggagAGTTATCTGTGGCACTATGAGCtttctttcttcttcttcttcttttttttttttttACATTAATTCCATTGGTGAGACCTGTTGT----------TGAATGTGTCAAACA---CCATCCGACGTTTAGATTCTTTAACTTCCTGT-----------------------ACTGATTCTTTGCTTGTGTGGTGGTGAAGAAGTTCCTGTTAA--TTAATTCTGCtg--------taaattaataaacaggtgctcttgctttatgggcttggttaacgtgtatctgctcccagaggtggcatcacc-tgtggaatgtaaacaatattaaatttctgagtctgcaaagctgaaggctggaccctaataagttaatcaa-gggtgtgaattctaccctgaatact-ttttggaagacagcctttcctctttttcttcttatttttttttttttttAATTTCTCCAAGTGAATGCCCATTGTTATGACAGTGTGTATGTTTTCTTTAAGGCATTATGTATTTGAATGC-TATGGATGTTAATGAATGATAAGAACCTGTC-AGCAAACAATCAATCAAATAATGATGGGCCAAGACA----ATGTTTAGGAACCTGGGAGAATGTT-AGGCATGGAAGGAATCCTGATGGA-C-TCTTACCAAGT-GTTGTCAGATCCCATGCTTGAATGCCTAGTAACTAAAAAA---------TTCATGCACCTGGGTGGAGTGGCCT----GTTCCATCCTTGGGAAGCCCTTTTAAAGAGGTTTTAGGGAGTT---TCCATTCTCACCGTAGGCCCTCTGAGCTTT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22115863 733 - 122082543 ACACTCAAGTGTTCAGACAAGT-------------CTGCCAGTGCCCAGCCAATGAATGGCCCACGG-------TGGCGTGCTGATGGGGTTTGGTCTTTGG---------------ACTGTGAATTCCC----------------------------------CTGTTTCCTTGGGGAGA--CATTGTACA------ATGAGCATATCAAATGCCCCCCCTCAACATTTTGTTCTTTTCACTTCCTGT-----------------------GTTGATTCCTTGGTCATGTGGTAGGTGAGAAGTTTCTGTAAG--CTAATGCTACCA--------Caagttaataaacagatgccctgg-tttataggcttcctcagaatgtgtcggctccaagcagtggcttcacc-tttagaatgtaaacagaaatgagtctgtgagtttgcaaggctaaaggccagatcctTCCAAGTTTATCAG-AACCATGAGTTCTGCCCCAAATGTT-CTTTGAAGG--------TA----------------------GCATTTTTA------AAAAGGGATCACTGTAGTTTATAGCCATACATCTGTTCTCCTTAAA-------------GAATGC-TATGGACTTGAGAGG---GCAAT--CTGGTT-GGCAGTGAACCAATCTAGTAATGACAGGCCAGGACA--GAATGCTTAGAGAG-TCAAGGAATTCC-AGGCATGGAAGGAATCTTCATGAATCTTCCTGACAGGTGGGTGCCAGATCCAGTGTTT----GTTAATTGGCT-GAAAACCTACGGTTTTCATGGAAACG------ATGGTCTGGTGGCTGTATCCCTGGGAAGGTCTTTTGCAGAGTTTCTCCACCTTTTAGTTTATTCCCATTCCCAGCCCTCTAAATGT- i mm10.chr11 C 0 C 0 s canFam3.chr9 21463250 727 + 61074082 aaactcagg-------acaagcactgaagcaaatgttggcagggactagccaagc-accactcaaagagagacagagag-----------tttagtcacaga---------------actatgaattttG-------------------------------------TAAAAATCGTAAAAATT-TTATAAAAATTTGATGTGGGCATCAAATG---CCACCTGACATTTAGTTCCTTTAACTTCTTAAAGGATTTTAACTTAAAATCCTTAACTGATTGCTTGCTCATGGTGTGGTTGAGAAGCTcctgttatagttaattct-ctg--------taagtacatacataggcttccttgttttatgggcttggctaacatgagtctgctccaagaggtggcttcgccacttagtatgtaa-----actaagtctttgagactgcaagccttaatgtga----tagctaactttgtcaa-ggctatgaattctgtcctgaatgcc-tttggaaaa--------ca------------------------------g---ccTCCAAGGAAATGCATATTATCATGATAATGTATGTGTTTTCTTTAAAGCAT----------------TGTGAACTTCAGAAA---ATGGAGACATGTTAAGTGAGCAATCAATCAGATAATGATAGGGTGAGACAGAGAGTGTTTAGGGACCTCAAAGAATCTT-AGGCATGGAAGGAATCCTGATAAA-CTTCTTGCCAAGTGGTTGTCAGTTCTAATGCTGGAATGTCTAGTAAAA-GAACA---------TTTGTGTACCTGGG----GTGGTCC----GGCCCATCTTTAGGATGCTCTTATAAAGAGCGTCTCCACATTT---T--------------GGTTCTCTGAActtt i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=328885.000000 s hg38.chr17_JH159148v1_alt 22970 47 + 88070 ttcctcattagaagcatctgtgactaagcaatcagaatggcttttct s panTro5.chr17 16334069 47 + 83181570 ttcctcattagaagcatctgtgactaagcaatcagaatggcttttct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16238947 47 + 83442489 ttcctcattagaagcatctgtgactaagcaatcagaatggcttttct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4085635 47 + 4267968 ttcctcattagaagcatctgtaactatgcaatcagaatggcttttct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2065997 47 - 2193130 ttcctcattagaagcatctgtgactatgcgatcagaatggcttttct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30133535 47 - 77216781 ttcctcattagaagcatctgtgactatgaaatcagaatggcttttct i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28046370 47 - 80997621 ttcctcattagaagcatctgtgactatgctatcagaatggcttttct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2102990 47 + 10377808 ttcctcattagaagcatctgtgactatgcaatcagaatggcttttct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1988295 47 - 8458610 ttcctcattagaagcatctgttactatgcaatcagaatggcttttct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64932917 47 + 75148670 ttcctcattagaaacatctgtgactatgcaatcagaatggcttttct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2172627 47 + 4244037 TTCCTCATTAGAAGCATCTGTGACTATGCAATCAGAATGGCTTTTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2195669 47 + 4569836 ttcctcattagaagcatctgtgactatgcaatcagaatggcttttct i colAng1.NW_012122154v1 C 0 C 0 s mm10.chr11 22116596 47 - 122082543 TCCCCCCTGAGTAGCAAACATTACGGGATAATCAGAACAGTACTTCT i mm10.chr11 C 0 C 0 s canFam3.chr9 21463977 47 + 61074082 tcctccattggaagcatctgtgactgtataatcagaatagcatttct i canFam3.chr9 C 0 I 188 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22850135 0 + 28711273 C e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=737938.000000 s hg38.chr17_JH159148v1_alt 23017 113 + 88070 gagcgcttccctaccct---t---agctccatcctctattccagtgccctttgctggaaaatcacattca-tgttcctgtaaata-gccaattatcttcctgctctgta-------------------gaatgcagttcc s panTro5.chr17 16334116 114 + 83181570 cagcgcttccctaccct---t---agctccgtcctctattccagtgccctttgctggaaaatcacattca-tgttcctgtaaatatgccaattatcttcctgctctgta-------------------gaatgcagttcc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16238994 114 + 83442489 gagcgcttccctaccct---t---agctccatcctctattccagtgccctttgctggaaaatcacattca-tgttcctgtaaatatgccaattatcttcctgctctgta-------------------gaatgcagttcc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4085682 114 + 4267968 gagcacttccctaccct---T---AGCTCCATCCTCTATTCCAGTGCCCTTTGCTGGAAAATCACATTCA-TGTTCCTGTAAACATGACAATTATCTTCCTGCTCTGTA-------------------GAATGCAGTTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2066044 114 - 2193130 gagcgcttccctaccct---t---agcttcatcttctattccagtgtcctttgccggaaaatcacattta-tgttcccGTAAACATGACAATTATCTTCCCGCTCTGTA-------------------GAATGCAGTTCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30133582 114 - 77216781 aagcacttccctactct---T---AGTTCCATCCTCTATTCCAGTGCCCTTTGTTGGAAAATCACATTCA-TGTTCCTGTAAACATGACAATTATCTTCCTGCTCTGCA-------------------GAATGCAGTTCC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28046417 114 - 80997621 aagcacttccctactct---T---AGTTCCATCCTCTATTCCAGTGCCCTTTGCTGGAAAATCACATTCA-TGTTCCTGTAAACATGACAATTATCTTCCTGCTCTGCA-------------------GAATGCAGTTCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2103037 114 + 10377808 aagcacttccctactct---t---agttccatcctctattccagtgccctttgctggaaaatcacattca-tgttcctgtaaacatgacaattatcttcctgctctgca-------------------gaatgcagttcc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1988342 114 - 8458610 aagcgcttccctactct---T---GGTTCCATCCTCTATTCCAGTGCCCTTTGCAGGAAAATCACATTCA-CATTCCTGTAAACATGACAATTATCTTCCTGCTCTGCA-------------------GAATGCAGTTCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64932964 114 + 75148670 aagcgcttccctactct---T---AGTTCCATCATCTATTCCAGTGCCCTTTGCAGGAAAATCACATTCA-TGTTCCTGTAAACATGACAATTATCTTCCTGCTCTGTA-------------------GAATGCAGTTCC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2172674 114 + 4244037 AAGCGCTTCCCTACTCT---T---AGTTCCATCCTCTATTCCAGTGCCCTTTGCTAGAAAATCACATTCA-TGTTCCTGTAAATGTGACAATTATCTTCCTGCTCTGCA-------------------GAATGCAGTTCC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2195716 114 + 4569836 aaacgtttccctactct---T---AGTTCCATCCTCTATTCCAGTGCCCTTTGCTGGAAAATCACATTCA-TGTTCCTGTAAACATGACAATTATCTTCCTGCTCTGTA-------------------GAATGAAGTTCC i colAng1.NW_012122154v1 C 0 C 0 s mm10.chr11 22116643 117 - 122082543 GAGCATGCCTCTGCCTT---TGCCATCTCTCTTCTCTA-CCTGGGGCACTTTGATAGGAAGTCAGATAGATTTTTTCTCTAAACACAGTGACTATTTTCTTTTGATGTG-------------------GGATACAGTttc i mm10.chr11 C 0 I 447 s canFam3.chr9 21464212 136 + 61074082 gagcacttccctaccataact---agctctactttctatttcagtgccctgggccaggaaatctcatcct-ttttcttctaaaCATCACGATTATCTTTCTGCTCTGTAGGATCTTTTTGCTCTATTCGAATGCAGTTTC i canFam3.chr9 I 188 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22850135 0 + 28711273 C e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=1453903.000000 s hg38.chr17_JH159148v1_alt 23130 221 + 88070 agccaaacaagcattt-------ccttgccttgctatcacaaatttttacatggtccttttgcagcaagtttatcatcactaacctttgcttaccaagtccttctcattgttaaaatctagatcaaggtggtttacctggttgcctaagaaccttctgctcaattt-tagtgattctgaggtccc-cacaaaatagctagattgttggatgttccttcat-------------------cccttctcct s panTro5.chr17 16334230 221 + 83181570 agtcaaacaagcattt-------ccttgccttgctatcacaaatttttacatggtccttttgcagcaagtttatcatcaccaacctttgcttaccaagtccttctcattgttaaaatctagatcaaggtggtttacctggatgcctaagaaccttctgctcaattt-tagtgattctgaggtccc-cacaaaatagctagattgttggatgttccttcat-------------------cccttctcct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16239108 221 + 83442489 agtcaaacaagcattt-------ccttgccttgctatcacaaatttttacatggtccttttgcagcaagtttatcatcaccaacctttgcttaccaagtccttctcattgttaaaatctagatcaaggtggtttacctggatgcctaagaaccttctgctcaattt-tagtgattctgaggtccc-cacaaaatagctagattgttggatgttccttcat-------------------cccttctcct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4085796 221 + 4267968 AGCCAAGCAAGCATTT-------CCTTGCCTTGCTATCACACATTTTTACATGGTCCTTTTGCAGCAAGTTTATCATCACTAACCTTTGCTTACCAAGTCCTTCTCATTGTTAAAATCTAGATCAAGGTGGTTTACCTGGATGCCTAAGAACCTTCTGCTCAATTT-TAGTGATTCtgaggtccc-cacaaaatagctagattgttggatgttccttcat-------------------cccttctgct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2066158 221 - 2193130 AGCCAAGCAAACATTT-------CCTTGTCTTGCTATCACAAATTTTTAGATGGTCCTTTTGCAGCAAGTTTATCACCACTAACCTTTGCTTACCAAGTCCTTCTCATTGTTAAAATCTAGATCAAGGTGGTTTACCTGGATGCCTAAGAGCCTTCTGCTCAATTT-TAGTGATTCtgaggtccc-cacaaaatagctagattgttggatgttccttcat-------------------cccttctcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30133696 221 - 77216781 AGCCAAGCAAGCATTT-------CTTTGCCTTGCTATCACAAATTTTTAGATGATCCTTTTGCAGCAAGCTTATCATCACTAACCTTTGTTTTCCAAGTCCTTCTCATTGTTAAAATCTAGATCAGGGTGATTTACCTGGATGCCTAAGAACCTTCTACTTAATGT-TAATGATTCTGAGGTCTC-CACAAAATATCTAGATTGTTGGATGTTCCTTCAT-------------------CCCTTCTCCT i rheMac8.chr16 C 0 I 3 s macFas5.chr16 28046531 221 - 80997621 AGCCAAGCAAGCATTT-------CTTTGCCTTGCTATCACAAATTTTTAGATGATCCTTTTGCAGCAAGCTTATCATCACTAACCTTTGTTTTCCAAGTCCTTCTCATTGTTAAAATCTAGATCAGGGTGATTTACCTGGATGCCTAAGAACCTTCTACTTAATGT-TAATGATTCTGAGGTCTC-CACAAAATATCTAGATTGTTGGATGTTCCTTCAT-------------------CCCTTCTCCT i macFas5.chr16 C 0 I 69628 s macNem1.NW_012014910v1 2103151 221 + 10377808 agccaagcaagcattt-------ctttgccttgctatcacaaatttttagatgatccttttgcagcaagcttatcatcactaacctttgttttccaagtccttctcattgttaaaatctagatcagggtGATTTACCTGGATGCCTAAGAACCTTCTACTTATTGT-TAATGATTCTGAGGTCTC-CACAAAATATCTAGATTGTTGGATGTTCCTTCAT-------------------CCCTTCTCCT i macNem1.NW_012014910v1 C 0 I 29563 s cerAty1.NW_012006043v1 1988456 221 - 8458610 AGCCAAGCAAGCATTT-------CCTTGCCTTGCTATCACAGATTTTTAGATGATCCTTTTGCAACAAGCTTATCATCACTAACCTTTGCTTTCCAAGTCCTTCTCATTGTTAAAATCTAGATCAGGGTGATTTACCTGGATGCCTAAGAACCTTCTACTCAATGT-TAATGATTCTGAGGTCTC-CACAAAATATCTAGATTGTTGGATGTTCCTTCAT-------------------CCCTTCTCCT i cerAty1.NW_012006043v1 C 0 I 2805 s chlSab2.chr16 64933078 221 + 75148670 AGCCAAGCAAGCATTT-------CCTTGCCTTGCTATCACAAATTTTTAGATGATCCTTTTGCAGCAAGCTTATCATTACTAACCTTTGCTTTCCAAGTCCTTCTCATTGTTAAAATCTAGATCAGGGTGATTTACCTGGATGCCTAAGAACCTTCTACTCAATGT-TAATGATTCTGAGGTCTC-CACAAAATATCTAGATTGTTGGATATTCCTTCAT-------------------CCCTTCTCCT i chlSab2.chr16 C 0 I 2808 s manLeu1.NW_012106252v1 2172788 221 + 4244037 AACCAAGCAAGCATTT-------CCTTGCCTTGCCATCACAAATTTTTAGATGATCCTTTTGCAGCAAGCTTATCATCACTAACCTTTGCTTTCCAAGTCCTTCTCATTGTTAAAATCTAGATCAGGGTGATTTACCTGGATGCCTAAGAACCTTCTACTCAATGT-TAATGGTTCTGAGGTCTC-CACAAAATATCTAGATTGTTGGATGTTCCTTCAT-------------------CCCTTCTCCT i manLeu1.NW_012106252v1 C 0 I 61605 s colAng1.NW_012122154v1 2195830 221 + 4569836 AGCCAAGTAAGCATTT-------CCTTGCCTTGCTATCACAAATTTTTAGATGATCCTTTTGCAGCAAGCTTATCATCACTAACCTTTGCTTACCAAGTCCTTCTCATTGTTAAAATCTAGATCAGGATGATTTACCTGGATACCTAAGAACCTTCTACTCAATGT-TAATGATTCTGAGGTCTC-CACAAAACACCTAGATTGTTGGATGTTCCTTCAT-------------------TCCTTCTCCT i colAng1.NW_012122154v1 C 0 I 9016 s mm10.chr11 22117207 241 - 122082543 TGTCAAGCAAATACTTAGAAAAGAAAAGCCTTGCTAATGCAAAATTTTAGA-GGTCCTCTGGTGGCAAGTTTGTCATCGCTAA----TATTTAGTGGGACCCTACTACTGTTACAATAAAGTTCAGAGTGGTTTTCCTGGATGCCTAAGAGCTTTGCATTTTAGGTGTACTGGG--TGAGGTCTC-CAGGAAATATTGAGATTATTTTATTATCCATTATTATTCCTCTCCTATTATTATCCCTCTCCT i mm10.chr11 I 447 I 58 s canFam3.chr9 21464348 221 + 61074082 AATCAAGCATACATTT-------CCCTGATTGGTTTTCACATATTTTAAGATAGTCCTTCTGTAGCAAGTTTACCATCATTAA-CTTTGCTCACCAGATACTCTTCACTGATAAAAACAGGTTCAAAGTGGTTTATCTGGATGCttaagaattttctactctgttt-tagttacactgagatcctgaatgcaacacctagagatttggatgtatcctcat-------------------ccctttcagt i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22850135 0 + 28711273 C e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I a score=524036.000000 s hg38.chr17_JH159148v1_alt 23351 428 + 88070 cccatgtgtgctg-----------------------------------------------------------------------------------------------------------gttttgtgatctgcctttgcaatgtatcatcaat-----ttcctgtgtttggccaggaagactg-----------cagtatgtccacacaaagagagctcatgggttcatcttcccttctttgttcatgcacaggttttccaCTGTGGAAGAAGGCAGGAAAGTCTGGGCCATGAGGATCGAAATCACATAGATGAGTATTTGCATCATGCCTGTTCTGCTACCTACAAGCTGCAGGCTTTGGGGGAAG-TACTTAATATATTCCAACCATGTTTTA----TTGTTTCTGCATTTACATTTTTGGGGAATTTTTGTACCTGAGT---TCTTTCAGTATCACCCCTGTTGTTCTACTTGGTAAATTGATTCATGGGTTCAAAATGGA--AGTTT---TTTATTTCCTTCCCTCTCTGATT-CGTTGCTAAGATACAATTCTGT-TAG s panTro5.chr17 16334451 428 + 83181570 cccgtgtgtgctg-----------------------------------------------------------------------------------------------------------gttttgtgatctgcatttgcaatgtatcatcaat-----ttcctgtgtttggccaggaacactg-----------cagtatgtccacacaaagagagctcatgggttcatcttcccttctttgttcatgcacaggttttccaCTGTGGAAGAAGGCAGGAAAGTCTGGGCCATGAGGATCGAAATCACATAGATGAGTATTTGCATCATGCCTGTTCTGCTACCTACAAGCTGCAGGCTTTGGGGGAAG-TACTTAATATATTCCAACCATGTTTTA----TTGTTTCTGCATTTACATTTTTGGGGAATTTTTGTACCTGAAT---TCTTTCAGTATCACCCCTGTTGTTCTACATGGTAAATTGATTCATGGGTTCAAAATGGA--AGTTT---TTTATTTCCTTCCCTCTCTGATT-CATTGCTAAGATACAATTCTGC-TAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16239329 428 + 83442489 cctgtgtgtgctg-----------------------------------------------------------------------------------------------------------gttttgtgatctgcatttgcaatgtatcatcaat-----ttcctgtgtttggccaggaacactg-----------cagtatgtccacacaaagagagctcatgggttcatcttcccttctttgttcatgcacaggttttccaCTGTGGAAGAAGGCAGGAAAGTCTGGGCCATGAGGATCGAAATCACATAGATGAGTATTTGCATCATGCCTGTTCTGCTACCTACAAGCTGCAGGCTTTGGGGGAAG-TACTTAATATATTCCAACCATGTTTTA----TTGTTTCTGCATTTACATTTTTGTGGAATTTTTGTACCTGAAT---TCTTTCAGTATCACCCCTGTTGTTCTACATGGTAAATTGATTCATGGGTTCAAAATGGA--AGTTT---TTTATTTCCTTCCCTCTCTGATT-CGTTGCTAAGATACAATTCTGC-TAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4086017 428 + 4267968 cccatgtgtgctg-----------------------------------------------------------------------------------------------------------gttttgtgatctgcatttgcaatgtatcatcaat-----ttcctgtgtttggccaggaagactg-----------cagtatgtccacacaaggagagctcatgggttcatcttcccttctttgttcatgcacaggttttccaCTGTGGAAGAAGGCAGGAAAGTATGGGCCATGAGGATCGAAATCACATAGATGAGTATTTGCATCATGCCTGTTCTGCTATCTACAAGCTGCAGGCTTTGGGGGAAG-CACTTAATATATTCCAACCATGTTTTA----TTGTTTCTGCATTTACATTTTTGGGGAATTTTTGTACCTGAAT---TCTTTCAGTATCACCCCTGTTGTTCTACATGGTAAATTGATTCATGGGTTCAAAATGGA--AGTTT---TTTATTTCCTTCCCTCTCTGATT-CGTTGCTAAGATACAATTCTGC-TAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2066379 422 - 2193130 cccatgtgtactg-----------------------------------------------------------------------------------------------------------gttttgtgatctgcatttgcaatgtatcatcaat-----ttcctgtgtttggccaggaagactg-----------tagtacgtccacacaaggagagctcatgggttcatctttccttctttgttcatgcacaggttttccaCTGTGGAAGAAGGCAGGAAAGTCTGGGCCATGAGGATCAAAATCACATAGATGAGTATTTGCATCATGCCTGTTCTGCTACCTACTAGCTGCAGGCTTTG-----AG-TACTTAAAATATTCCAATCATGTTTTA----TTGTTTCTGCATTTACATTTTTGGGGAATTTTTGTACCTGAAT---TCTTTCAGTATCACCCCTG-TGTTCTACATGCTAAATTGATTCATGGGTTCAAAATGGA--AGTTT---TTTATTTCTTTCCCTCTCTGATT-TGTTGCTAAGATACAATTCTGC-TAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s mm10.chr11 22117506 527 - 122082543 tccagctgtgctgggaacttgccgtgtagtccaggctggtcttgagtttacagtggacctgccattgcctcccaagtgctgggattacagacatgtgccatcatgcctggctATGCACCAGCTTTGTGATGTACATCTTTAGCACATCCTTAATATTTATTTTTGTCTCTTGCCAGGAAGATTGTATTTATTGTATAATCTGCCCATAGGAAGAGAGCTCATGCATGCATCTTT-CTTCCTAGTTTACCTGCATGTTTCCTACTGTGGAAGGAGGCAGGAATGGCTGGGTCATG--------AACCAGAGACATGGATATTCTCATCATTCCTCTTTTGCT---TA------------TTTG-----AG-AATTTAATTTGTCCCTA-CAGCTTCCA----CTGGTTTTACGTGTTCTTATTTCAGAAGCATTTGTACCCGAACTGGTCTCTCAGTGTC-CCCCTCTTGTCCCACCTA-CAAGCTGATTCGTGTGTTCGATGTAGACCAGTTTTTCTTTCCTTCTTTTCTGCCTTGATT-GGTTGGCAAGACATGATCCAGC-TAG i mm10.chr11 I 58 I 392 s canFam3.chr9 21464569 429 + 61074082 tgcatatgtgtc------------------------------------------------------------------------------------------------------------gtttagtgagctgcattttcagtgcatcatcaat-----tttctgtgtctggcccagaaggcta-----------taatatgcccacataatgagagcttatccacgcatatctccttctatgttcatctacattttctcAACAGCAGAAGAAGACAGGAGAGGCTAAGCCATGGGGATTGAAATCAGATAGATGAAAATTCACATCATTCATGTTCTGC----TATAGACTACAGGCTTTTGGGGAAGTTATTTAATATATTCCAACCATTCTTCATTTTTTTTTTTTACATATACATTGCTGAGGAGCTTCTGTACCCAAATTCTTCTTTCAACATCACTCCTTTTGTTCTACATTACAAGTTGATTCGTGAGTTCCATATTGA--ACTTT-------TCTCTGTTCCTCCCTGGTTGGGTTGGCCAGTTACAATCCTGCATAG i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22850135 0 + 28711273 C e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28046752 69628 - 80997621 I e rheMac8.chr16 30133917 3 - 77216781 I a score=27670.000000 s hg38.chr17_JH159148v1_alt 23779 25 + 88070 ATACAGTCGTCATGAACcacccttc s panTro5.chr17 16334879 25 + 83181570 ATACAGTCGTCATGAACcacccttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16239757 25 + 83442489 ATACAGTCGTCATGAACcacccttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4086445 25 + 4267968 ATACAGTCGTCATGAACCACCCTTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2066801 23 - 2193130 --ACAGTCGTCATGAACCACCCTTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s canFam3.chr9 21464998 25 + 61074082 ATAGAGACATCTCAACCCACTCTTC i canFam3.chr9 C 0 C 0 e mm10.chr11 22118033 392 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22850135 0 + 28711273 C e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28046752 69628 - 80997621 I e rheMac8.chr16 30133917 3 - 77216781 I a score=338887.000000 s hg38.chr17_JH159148v1_alt 23804 263 + 88070 ctatatcattaataatataggctcaccttcctc------acttct----------actgtataaattttgtctcttgtttgtattcttcccgaagcacaataaaggtgaggatgttgaatgtctcgttcacttctgtaatcacagcacctggcacagtacttaacacacagtaagtgctcaataaatcttatttaaataaaggaTTGTTTTAATATCCAGATGTAAGTCTTTATTCTTATTCACTCTCCC----GAAGTCCCAACTATTGGTAGAATAAGGAA s panTro5.chr17 16334904 263 + 83181570 ctatatcattaataatataggctcaccttcctc------acttct----------actgtataaattttgtctcttgtttgtattcttcccgaagcacagtaaaggtgaggatgttgaatgtctcgttcacttctgtaatcacagcacctggcacagtacttaacacacagtaagtgctcaataaatcttatttaaataaaggaTTGTTTTAATATCCAGATGTAAGTCTTTATTCTTATTCACTCTCCC----GAAGTCCCAACTACTGGTAGAATAAGGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16239782 263 + 83442489 ctatatcattaataatataggctcaccttcctc------acttct----------actgtataaattttgtctcttgtttgtattcttcccgaagcacagtaaaggtgaggatgttgaatgtctcgttcacttctgtaatcacagcacctggcacagtacttaacacacagtaagtgctcaataaatcttatttaaataaaggaTTGTTTTAATATCCAGATGTAAGTCTTTATTCTTATTCACTCTCCC----GAAGTCCCAACTACTGGTAGAATAAGGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4086470 263 + 4267968 CTATATCATTAATAATATAGGCTGACCTTCCTC------acttct----------actgtataaattttgtctcttgtttgtattcttccagaagcacaataaaggtgaggatgttgaatgtctcgttcacttctctaatcacagcacctggcacagtacttaacacacagtaagtgctcaataaatcttatttaaataaaggaTTGTTTTAATACCCAGACGTAAGTTTTTATTCTTATTCACTCTCCC----GAAGTCCCAACTATTGGTAGAATAAGGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2066824 268 - 2193130 CTATATCATTAATAATATAGGCTCACCTTCCTCACTTCTacttct----------actgtataaattttgtctcttgtttgtattctt-cagaagcacaataaacgtgaggatgttgaatgtcttgttcacttctataatcacagcacctggcacagtacttaacacacagtaagtgctcaataaatctggtttaaataaaggaTTGTTTTAATATCCAGATGTAAGTCTTTATTCTCATTCGCTCTCCT----GAAGTCCCAACTATTGGTAGAATAAGGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s mm10.chr11 22118425 248 - 122082543 CTATGTAATT-GTGATGGAAGTTTATGATTCTC------ACTCCT----------GATATACGCATTTCCT-TTTTCTGTCTGTTCTTCAAG----ACAACgacagtggacatcttgatggccttgttcacatctttaatcctggcatctggcacagtacttag---gtagtaagtgccccctaaattctattgaaATAAAGGACCATTTTAACACAGAGACCAAAATCTTTGTTTCCATTCTTCATACC----AAATTCTCAAT------TAGGAAAAAGAG i mm10.chr11 I 392 C 0 s canFam3.chr9 21465023 277 + 61074082 CTATATCCTTGGTGATAAAGGCTCATCAACCCT------ACTTAGGGCATATAAAGGCATATAAATTTCATCTCCTGTTTATATTCTACCAGAagcacaataagggtagggagctggaatgtctcattcactcctgtagttccaacatctggcacagtacttaacacacagtaagtactcagtaactcttgttgaaATAAAGGACACTTTTAATATCCAGATGTAATTCTCAGTTCTCTCTCCCCTCCCCCATGCAAGCCCCAACTATGGATAGGAAAGGGAT i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22850135 0 + 28711273 C e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28046752 69628 - 80997621 I e rheMac8.chr16 30133917 3 - 77216781 I a score=183204.000000 s hg38.chr17_JH159148v1_alt 24067 127 + 88070 ATGAGACTGTGTGAGGGTACCAAGTAATTTGC------TGTCATATTCAA---------GACTCCATAGACCC-GGTTATGTCTCTAGACTGGTAGgggcagggagcatagcacacacagtgagtgtagtgtagacagcttag s panTro5.chr17 16335167 127 + 83181570 ATGAGACTGTGTGAGGGTACCAAGTAATTTGC------TGTCATATTCGA---------GACTCCATAGACCC-GGTTATGTCTCTAGACTGGTaggggcagggagcatagcacacacagtgagtgtagtgtagacagcttag i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240045 127 + 83442489 ATGAGACTGTGTGAGGGTACCAAGTAATTTGC------TGTCATATTCGA---------GACTCCATAGACCC-GGTTATGTCTCTAGACTGGTAGgggcagggagcatagcacacacagtgagtgtagtgtagacagcttag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4086733 127 + 4267968 ATGAGACTGTGTGAGGGTACCAAGTAATTTGC------TGTCATATTCAA---------GACTCCATAGACCC-GGTTATGTCTCTAGACTGGTAGGGGCAGGGAGCATAGCACACACAGTGAGTGTAGTGTagacagcttag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067092 127 - 2193130 ATGAGACTGTGTGAGGGTACGAAGTAATTTGC------TGTCATATTCAA---------GGCTCCATAGACCC-GGTTCTGTCTCTAGACTGGTAGGGGCAGGGAGCATAGCACACACAGTGAGTGTAGTGTagacagcttag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22850135 128 + 28711273 ATGAGATCATGTGGAAGCACCAAGTTATTTGC------TCTCATATTCAG---------GGATTTATAGATCCAAGTTCCTTCTTTAGACTGGTGGGACCAGGGAGTGCAGGGAACACAGCAAGTATGCGGCAAACAGCCTGA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22118673 143 - 122082543 GTCAAACTGAGTGCATGGATCAGGTAATTTGCAACTATTGGTATTTTCACTGTCCATATAGCTTCATCAACCCATGTTCCTTCTCTAGACATGTATGAGCAAGCTGTGTAGGGATCCCAGTGAGTGAAGTGCCAACAGTTTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21465300 120 + 61074082 AGGACAATGTGTGAAAGTGT----TAATTTGT------TTTTATGTTCAA---------AGTTTGCTAAGCCA-TGTTCTTTCCCTAGCCTGGTGGTG--AGGGAGTATAA-GTACACAGTGAGTGTGGCAtgttaaccttag i canFam3.chr9 C 0 I 29909 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28046752 69628 - 80997621 I e rheMac8.chr16 30133917 3 - 77216781 I a score=429114.000000 s hg38.chr17_JH159148v1_alt 24194 355 + 88070 tgtttgaagccaggtcaact----gttaactgtacaactttgaacaagttccttcatctcccttagcctctgtttcttcatctgtgaaatgaggaaaataaaacATTGGTGGATTATGAATTAGAAAA---------------ACCTAGACTAATACCTGTAGTTACTCAGTAAATGGTAGTGCCTCAGCTCATCCTTGA-------ATGC-------ATCAGGAGAGCAAGCACTTAGCAAGTCAGACAACATGGAAGCCTCTTTGGAAAATCC--CTCCACCTTCTTAGATTT-----CCTAAGACCTAACT-ACTATGTGATAGCTCAGGCCACAGAATATTATTTTTCCCCTGGAGCCAGTATCTGTTCTTTTTTTTCAAGAAATATCTTGG s panTro5.chr17 16335294 355 + 83181570 tgtttgaagccaggtcaact----gttaactgtacaactttgaacaagttccttcatctcccttagcctctgtttcttcatctgtgaaatgaggaaaataaaacATTGGTGGATTATGAATTAGAAAA---------------ACCTAGACTAATACCTGTAGTTACTCAGTAAATGGTAGTCCCTCAGCTCATCCTTGA-------ATGC-------ATCAGGAGAGCAAGCACTTAGCAAGTCAGACAACATGGAAGCCTCTTTGGAAAATCC--CTCCACCTTCTTAGATTT-----CCTAAGACCTAACT-ACTATGCGATAGCTCAGGCCACAGAATATTATTTTTCCCCTGGAGCCAGTATCTGTTCTTTTTTTTCAAGAAATATCTTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240172 355 + 83442489 tgtttgaagccaggtcaact----gttaactgtacaactttgaacaagttccttcatctcccttagcctctgtttcttcatctgtgaaatgaggaaaataaaacATTGGTGGATTATGAATTAGAAAA---------------ACCTAGACTAATACCTGTAGTTACTCAGTAAATGGTAGTCCCTCAGCTCATCCTTGA-------ATGC-------ATCAGGAGAGCAAGCACTTAGCAAGTCAGACAACATGGAAGCCTCTTTGGAAAATCC--CTCCACCTTCTTAGATTT-----CCTAAGACCTAACT-ACTATGCGATAGCTCAGGCCACAGAATATTATTTTTCCCCTGGAGCCAGTATCTGTTCTTTTTTTTCAAGAAATATCTTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4086860 353 + 4267968 tgtttgaagccaggtcaact----gttaactgtacaagtttgaacaagttccttcatctcccttagcctctgtttcttcatctgtgaaatgaggaaaataaAACATTGGTGGATTATGAACTAGAAAA---------------ACCTAGACTAATACCTGTAG-TACTCAGTAAATGGTAGTCCCTCAGCTCATCCTTGA-------ATGC-------ATCAGGAGAGCAAGCACTTAGCAAGTCAGACAACATGGAAGCCTCTTTGGAAAATCC--CTCCACCTTCTTAGATTT-----CCTAAGACCTAACT-ACTATGCGATAGCTCAGGCCACAGAATATTACTTTTCCCCTGGAGCCAGTAACTGTTC-TTTTTTTCAAGAAATATCTTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067219 354 - 2193130 tgcttgaagccaggtcaact----gttaactgtacaactttgagcaagttccttcatctcccttagcctctgtttcttcatctatgaaatgaggaaaataaAACATTGGTGGATTATGAATTAGAAAA---------------ATCTAGACTAATACCTGTAGTTACTCAGTAAATGGTAGTCCCTCAGCTCATCCTTGA-------ATGC-------ATCAGGAGAGCAAGCACTTAGCAAGTCAGACAACATGGAAGCCTCTTTGGAAAATCC--CTCTACCCTCTTAGGTTT-----CCCAAGACCTAACT-ACAATGTGATAGCTCAGGCCACAGAATATTCTTCCTCTCCTGGATCCAGTATCTGTTC-TTTTTTTCAAGAAATATCTTGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22850263 351 + 28711273 TGTTTGAAGTCAGGTAAAATGCAGGTtagctgtgtgacttggagcaagttacttcatctcccttagcctctgttttctcatctgtataatgggaataataaaactttgctggattatGAATTAGAAAATTATGAAAAA----TATCTAAGCTATTATCTGTAGATCCTTAGCAAATGACAGTCCCTGTGCTCATCCTTCT-------GCTCATCTTCAATCAGGAGAACAAGCACTTAGCAAGTCAGACAACTTGGAAGCCTCTTCAGAGAATCC--CTTGGCCCTCTTAGGTTT-----TCTAAGACTTAAC--ACAAGGGGATGGCTCTGGCTACAAAACACTAATTTCTTCTCATAGCCAGCTCCTGG------------------------- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22118816 359 - 122082543 ------------------------CCTAGCTGTTGAACCCTGAACAAGCTACTTCATCTCACTTTGTCTCTTGTTGCCAGAC---AAAATGGACATGATGAAATGATG-CAGATTATGAATTAGATAGGAGGAGAAAAGATCTAGGTAGGTTCATACCTGTATATAATCAATAGATACTGGTTTCCCAGCTTATCTTCCTCCTTATCATGG-------ACCAGGGGAGTAAGCATCAAGCAAACAAGATAACTTGGTGGCTCCTTCCCAGAATCCTATCCTATCCTGTCTAACTGTGCCATCTGAGATCTAACTAACCATAAGTTAGTTCTGGTCATAAACTATTTGATCCCATCAAGAGCCAGGATCAGTT--GTTTGCCTAGCACACATATGAG i mm10.chr11 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21465420 29909 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28046752 69628 - 80997621 I e rheMac8.chr16 30133917 3 - 77216781 I a score=239798.000000 s hg38.chr17_JH159148v1_alt 24549 198 + 88070 --TATCCTCTTTGGTGTTCAG---CTCTTC-----GGAAAGTCTA-GCTCCCACTTTGGGGGACTACAATAACGTCTATTGTCATTATATCCAGTATACTTTTTAAGAGTGACCAGTTTCCT----TTATTTTCTTTCTCAAATCCTTATGTTTTCTTTTTCT-AATACTCTGATGTTGA-----------------------ATCTCCTCTGCTTCA----------------ACTTTGCCTC-----ACAACATTG s panTro5.chr17 16335649 198 + 83181570 --TATCTTCTTTGGTGTTCAG---CTCTTC-----GGAAAGTCTA-GCTTCCACTTTGGGGGACTACAATAACGTCTATTGTCATTATATCCACTATGCTTTTTAAGAGTGACCAGTTTCCT----TTATTTTCTTTCTGAAATCCTTATGTTTTCTTTTTCT-AACACTCTGATGTTGA-----------------------ATCTCCTTTGCTTCA----------------ACTTTGCCTC-----ACAACATTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240527 198 + 83442489 --TATCTTCTTTGGTGTTCAG---CTCTTC-----GGAAAGTCTA-GCTCCCACTTTGGGGGACTACAATAACGTCTATTGTCATTATATCCACTATGCTTTTTAAGAGTGACCAGTTTCCT----TTATTTTCTTTCTCAAATCCTTATGTTTTCTTTTTCT-AACACTCTGATGTTGA-----------------------ATCTCCTCTGCTTCA----------------ACTTTGCCTC-----ACAACATTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087213 198 + 4267968 --TATCCTCTTTGGTGTTCAG---CTCTTC-----GGAAAGTCTA-GCTCCCACTTTGGGGGACTACAATAACGTCTATTGTCATTATATCCACTATGCTTTTTAAGAGTGACCAGTTTCCT----TTATTTTCTTTCTCAAATCCTTATGTTTTCTTTTTCT-AACACTCTGATGTTGA-----------------------ATCTCCTCTGCTTCA----------------ACTTTGCCTC-----ACAACACTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067573 198 - 2193130 --TATCCGCTTTGGTGTTCAG---TTCTTC-----GGAAAGTCTA-GCTCCCACTTTGGGGGACTACAATAGCGTCTATTGTCATTATATCCACTATACTTTTTAAGAGCGACCAGtttcct----ttcttttctttctcaaatccttatgttttcttttTCT-AACACTCTGATGTTGA-----------------------ATCTCCTCAGCTTCA----------------ACTTTGCCTC-----ACAACATTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28116380 235 - 80997621 --TATTCTCTTTCTTATTCAGTTTCTCATC-----AGAAGATCCAGGATCCCTCATTTGGGAACCA-------GCCTATTGCC--CATCTTGAC-------TTTAAAAGTACATAATTTCTTCCCATTTTCTTCTTTCTACCATTTCTCCCCTTTTTTTTTCTGAAAACTCTGATTTCGACTTCCTTTAGCATAATTGACTTTATCTTCTTTATCTCATAAAACACAGGAAGTTATTTTGTTTCCTTTTATGGCCCAG i macFas5.chr16 I 69628 C 0 s otoGar3.GL873537 22850614 193 + 28711273 --CATCCTCTGTATCATTCAG---ATCTTCTTAAAAAAAAATCTC--CTCCTACTTTGGGGAACTAAACTTACATCGAT------TATATCCACCATGGTTTCTAGGAGCCCCAACTTTCTT----TTCTTTTCTTCCTCAAATCCTTCTGTTTTC---TGCT-AATACTTTAGTGTTGA-----------------------ATCTCCTCAGCTTCA----------------GTTTTGCTAT-----ACAACATCC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22119175 161 - 122082543 TATATTGCTTATATTGAT-AA---TTATTC-----AGAAGACCTG-GCTCCGTTTTTGGGGGACCACATTCATACCTGT------TACGTCTGCTAAGACTACTAGGGT------GTTTAAT----TTCTTCTCTTTCTCAAATCCCAC----------TTTT----------------------------------------ATTTCCTCAGCTTCA----------------GTTTTGCCTC-----AAAACATCC i mm10.chr11 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21465420 29909 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e rheMac8.chr16 30133917 3 - 77216781 I a score=6946.000000 s hg38.chr17_JH159148v1_alt 24747 6 + 88070 AGGCAC s panTro5.chr17 16335847 6 + 83181570 AGGCAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240725 6 + 83442489 AGGCAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087411 6 + 4267968 AGGCAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067771 6 - 2193130 AGGCAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28116615 6 - 80997621 AGATCA i macFas5.chr16 C 0 C 0 s otoGar3.GL873537 22850807 6 + 28711273 AGCAAC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22119336 6 - 122082543 AGAGAC i mm10.chr11 C 0 C 0 s canFam3.chr9 21495329 6 + 61074082 AGACTG i canFam3.chr9 I 29909 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1854343 45370 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e rheMac8.chr16 30133917 3 - 77216781 I a score=268432.000000 s hg38.chr17_JH159148v1_alt 24753 159 + 88070 TGGTTGGATCAAAGCATTATATACCCATTGCTCAGTTACTTCAATTCTGAGGATTCTGT--AAATATGCACTACCCTTATAATCCTCTGATTGAGAAGCTAGGTTGATCCAGCATTT-GGAGCAC--------AGAAACTGTG-----------TCTTGTGCGCATTGC-AGGGTGTTTCTT s panTro5.chr17 16335853 159 + 83181570 TGGTTGGATCAAAGCATTATATACCCATTGCTCAGTTACTTCAATTCTGAGGATTCTGT--AAATATGCACTACCCTTATAATCCTCTGATTGAGAAGCTAGGTTGATCCAGCATTT-GGAGCAC--------AGAAACTGTG-----------TCTTGTGCGCATTGC-AGGGTGTTTCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240731 159 + 83442489 TGGTTGGATCAAAGCATTATATACCCATTGCTCAGTTACTTCAATTCTGAGGATTCTGT--AAATATGCACTACCCTTATAATCCTCTGATTGAGAAGCTAGGTTGATCCAGCATTT-GGAGCAC--------AGAAACTGTG-----------TCTTGTGCGCATTGC-AGGGTGTTTCTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087417 159 + 4267968 TGGTTGGATCAAAGCATTATATACCCATTGCTCAGTTACTTCAATTCTGAGGATTCTGT--AAATATGCACTACCCTTATAATCCTCTGATTGAGAAGCTAGGTTGATCCAGCATTT-GGAGCAC--------AGAAACTGTG-----------TCTTGTGCGAATTGC-AGGGTGTTTCTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067777 159 - 2193130 TGGTTGGATCAAAGCATTATATACCCATTGCTCAGTTACTTCAATTCTGAGGATTCTGT--AAATATGCACTACCCTTATAATCCTCCGATTGGGAAGCTAGGTTGATCGAACATTT-GGAGCAC--------AGAAACTGTG-----------TCTTGTGTGCATTGC-AGGGTGCTTCTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28116621 168 - 80997621 TGATTTGATCAAAG-GGCATAAATCCATTGCATGGTTACCTTAATTCTTAGGGTTCTGTACAAATTTATCTTCCCTTAACGAAGTTCGTGTTAGGAAACAAAATTGCCCCAAAGTTTGGGAACCC--------AGGAAGCATGGTCCAA-----TCTTGTGTGCTTTGCAAAGGTGATTCTT i macFas5.chr16 C 0 C 0 s saiBol1.JH378271 1899713 173 + 3513951 TGATTAGATCAAAG-GACATAAGTCCATTGCATGGTAACCTTAATTCTTAGGATTCTGTACAAATTTATCTTCCCTTAACAAAGTTCATGTTAGGAAACAAAATTGCCCCAAAGCTTGAGAACTC--------AGGAAGCATGGTCCAAATTCTACTTGTGTGCTTTGCAAAGGTAATTCTT i saiBol1.JH378271 I 45370 C 0 s otoGar3.GL873537 22850813 161 + 28711273 TGGTTGTATCAAAGGGTTATATAATCACTGTTTAAGTACTTTAATTTCCAGGAGTCTGT-TAAGTCTATACCACCCTCATCATGCTCTAATTGGGAAGTTATGTTGATCCAGACTGTGTAGGCAC--------AAAAAATGTG-----------TCTTGTGTGCATGGA-AGGGTGTGTGTT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22119342 116 - 122082543 CAGGTAGATCACGGGGTTAT------------------CCTCA-----CAGAGCTCTGT------------------------------CCAGGAAAGCTAAGCTGATTCAGGGTTT-AGAGAACCCCCAAATCAGAAATGCA-----------CTCTAGCAACCTTAC-AGACTGTTTCTT i mm10.chr11 C 0 C 0 s canFam3.chr9 21495335 166 + 61074082 TGATTGGATCAAAGCAGTCTATGCCTACTGCATGGATACCTCAACTATCAGGACTCTAC--AAACTTCTCTTCTCTGAACAATGTCCAGGTCAGGAGATCAAATTGCCTCAAAGTTTGAGAGCCC--------AGGAATTGTGGCCTGA-----GCTTATGTGCTTGCA-AGGCTGATTCTT i canFam3.chr9 C 0 I 1030 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e rheMac8.chr16 30133917 3 - 77216781 I a score=17851.000000 s hg38.chr17_JH159148v1_alt 24912 11 + 88070 AGTCT---TTTTTG s panTro5.chr17 16336012 11 + 83181570 AGTCT---TTTTTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240890 11 + 83442489 AGTCT---TTTTTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087576 11 + 4267968 AGTCT---TTTTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067936 11 - 2193130 AGTCT---TTTTTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28116789 14 - 80997621 AATCCTAATTTCTG i macFas5.chr16 C 0 C 0 s saiBol1.JH378271 1899886 14 + 3513951 AATCCTAATTTCTG i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22850974 12 + 28711273 CATCTT--TTTTTG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22119458 13 - 122082543 AATCT-AGTTTTTG i mm10.chr11 C 0 I 1745 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21495501 1030 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e rheMac8.chr16 30133917 3 - 77216781 I a score=4242.000000 s hg38.chr17_JH159148v1_alt 24923 2 + 88070 TT s panTro5.chr17 16336023 2 + 83181570 TT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240901 2 + 83442489 TT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087587 2 + 4267968 TT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067947 2 - 2193130 TT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28116803 2 - 80997621 TT i macFas5.chr16 C 0 C 0 s saiBol1.JH378271 1899900 2 + 3513951 TT i saiBol1.JH378271 C 0 I 1918 s otoGar3.GL873537 22850986 2 + 28711273 TC i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21495501 1030 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e rheMac8.chr16 30133917 3 - 77216781 I a score=7438.000000 s hg38.chr17_JH159148v1_alt 24925 5 + 88070 CAAGT s panTro5.chr17 16336025 5 + 83181570 CAAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240903 5 + 83442489 CAAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087589 5 + 4267968 CAAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067949 5 - 2193130 CAAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28116805 5 - 80997621 AAGGT i macFas5.chr16 C 0 T 69945 s otoGar3.GL873537 22850988 5 + 28711273 CAGGT i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21495501 1030 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e rheMac8.chr16 30133917 3 - 77216781 I a score=455497.000000 s hg38.chr17_JH159148v1_alt 24930 392 + 88070 ATTCTGCA-TTTTTAGGTAGAAAAGTGACCTACATGTACAAGACATT-TCATTTTCATTTGTCAACAAGCAACTCAAATCATACACCTTCCCTAAAACTCAGACACCAGAGTTATTTCTACTTGTATTAAAAtctaa------ataataatgccctggatcaagattcagaacatctgggtattggacttaattctatcaatttctaactgtatgacctgaggccagtgatttttcccatttgtaatgtgcaaatgatagtctttgctttgcccaccttgtggggttactatgagattagaagagataatAGGAAATACAATACACATGCAAGGCCTTTTAAAGGAATAGCTGTGCAGAACAAAACCCCAATGTATGGTCCATGACAGGAAAGACTTTAG s panTro5.chr17 16336030 392 + 83181570 ATTCTGCA-TTTTTAGGTAGAAAAGTGACCTACATGTACAAGACATT-TCATTTTCATTTGTCAACAAGCAACTCAAATCATACACCTTCCCTAAAACTCAGACACCAGAGTTACTTCTACTTGTATTAAAATCTAA------ATAATAATgccctggatcaagattcagaacatctgggtattggacttaattctatcaatttctaactgtatgacatgaggccagtgatttttcccatttgtaatgtgcaaatgatagtctttgctttgcccaccttgtggggttactatgagattagaagagataatAGGAAATACAATACACATGCAAGGCCTTTTAAAGGAATAGCTGTGCAGAACAAAACCCCAATGTATGGTCCATGACAGGAAAGACTTTAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16240908 392 + 83442489 ATTCTGCA-TTTTTAGGTAGAAAAGTGACCTACATGTACAAGACATT-TCATTTTCATTTGTCAACAAGCAACTCAAATCATACACCTTCCCTAAAACTCAGACACCAGAGTTACTTCTACTTGTATTAAAATCTAA------ATAATAATgccctggatcaagattcagaacatctgggtattggacttaattctatcaatttctaactgtatgacatgaggccagtgatttttcccatttgtaatgtgcaaatgatagtctttgctttgcccaccttgtggggttactatgagattagaagagataatAGGAAATACAATACACATGCAAGGCCTTTTAAAGGAATAGCTGTGCAGAACAAAACCCCAATGTATGGTCCATGACAGGAAAGACTTTAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087594 392 + 4267968 ATTCTGCA-TTTTTAGGTAGAAAAGTGACCTACATGTACAAGACATT-TCATTTTCATTTGTCAACAAGCAACTCAAATCATACACCTTCCCTAAAACTCAGACACCAGAGTTACTTCTACTTGTATTAAAATCTAA------ATAATAATgccctggatcaagattcagaacatctgggtattggacttaattctatcaatttctaactgtatgacatgaggccagtgatttttcccatttgtaatgtgcaaatgatagtctttgctttgcccaccttgtggggttactatgagattagaagagataatAGGAAATACAATACACATGCAAGGCCTTTTAAAGGAATAGCTGTGCAGAACAAAACCCCAATGTATGGTCCATGACAGGAAAGAATTTAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2067954 392 - 2193130 ATTCTGCA-TTTTTAGGTAGAAAAGTGACCTACATGTACAAGACATT-TCATTTTCATTTCTCAACAAGCAACTCAAATCATACACCTTCCCTAAAACTCAGGCACTAGAGTTACTTCTACTTGTATTAAAATCTAA------ATAATAATGCCCTGGATCAAGATTCAGAACATCTGGGTATTGGACTTAATTCTATCAATTTCTAACTGTATGACATGAGGCCAGTGATTTTTCTCATTTGTAATGTGCAAACGATAGTCTTTGCTTTGCCCACCTTGTGGGGTTACTATGAGATTAGAAGAGATAATAGGAAATACAATACACATGCAAGGCCTTTTAAAGGAATAGCTGTGCAGAACAAAACTCCAATGTACGGTCCATGACAGGAAAGACTTTAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22850993 378 + 28711273 ATTCTGAATTTTTTAGGTAGAAAATTGACCTATATGTGCAAGGCATTATTTTTTGCATTGGTAGATAAGTGACTTCTATTGTACAACTTCCC-AAAACTCAGTAACCAGAGTTATTTC-------ATTAAAATCTAAGTCATTATAATTAGATAAtagatcaggagtcagaccatctggatactgaacccagttctatcaattagtaagtgtaggacatgaagcaaatgacttttgccatttgtaacatggaaatgatcatcttggctctgcccacct-------------TGAGATTAGAAGCAGGACTATGAAATGCCACACACATGCAAGGCCTTTGAAAGGAATAGCCGTGCA-AACATAACCCCACTATACGGTAGATGATAGCAAAGACTTTAG i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21495501 1030 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=510363.000000 s hg38.chr17_JH159148v1_alt 25322 580 + 88070 GAAGATAATTCTTTTTTTTAAAATAAtttttttattatactgtaagtttagggtacatgtgcacaacatgcaggtttgttacataggtatacatgtgccatgttggtttgccgcacccgttaactcgtcatttacattaggtatttctcctaatgctatccctccccctgacccccaccccatgacaggccctggggtgtggtgttccctgccctttgtccaagtgttctcattgttcaattcccacctatgagggagaacatgcggtatttggttttctgtccttgtgatagtttgcttagaatgatggtttccagctgcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccata-tttcttaatccagtctatcactgatggacatttgggttggttccacgtctttgctattgtgaatagtgccgcagcaaacatacgtgtgcatgcgtctttatagtagcatgatttataagcctttgggtatatacccagtaatgggattgctgggtcaaatggtatttctagttctagatcctt s panTro5.chr17 16336422 579 + 83181570 GAAGATAATTCTTTTTTTT-AAATAAtttttttattatactgtaagtttagggtacatgtgcacaatgtgcaggtttgttacataggcatacatgtgccatgttggtttgccatacccgttaactcgtcatttacattaggtatttctcctaatgctatccctccccctgactcccaccccatgacaggccctggggtgtggtgttccctgccctttgtccaagtgttctcattgttcaattcccacctatgagggagaacatgcggtatttggttttctgtccttgtgatagtttgcttagaatgatggtttccagctgcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgcatatgtgccata-tttcttaatccagtctatcactgatggacatttgggttggttccacgtctttgctattgtgaatagtgcctcagcaaacatacgtgtgcatgcgtctttatagtagcatgatttataagcctttgggtatatacccagtaatgggattgctgggtcaaatggtatttctagttctagatcctt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241300 579 + 83442489 GAAGATAATTCTTTTTTTA-AAATAAtttttttattatactgtaagtttagggtacatgtgcacaatgtgcaggtttgttacataggcatacatgtgccatgttggtttgccacacccgttaactcgtcatttacattaggtatttctcctaatgctatccctccccctgactcccaccccatgacaggccctggggtgtggtgttccctgccctttgtccaagtgttctcattgttcaattcccacctatgagggagaacatgcggtatttggttttctgtccttgtgatagtttgcttagaatgatggtttccagctgcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccata-tttcttaatccagtctatcactgatggacatttgggttggttccacgtctttgctattgtgaatagtgcctcagcaaacatacgtgtgcatgcatctttatagtagcatgatttataagcctttgggtatatacccagtaatgggattgctgggtcaaatggtatttctagttctagatcctt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4087986 579 + 4267968 GAAGATAATTCTTTTTTTA-AAATAAtttttttattatactgtaagtttagggtacatgtgcacaatgtgcagttttgttacataggtatacatgtgccatgttggtttgctgcaccggttaactcgtcatttacattaggtatttctcctaatgctatccctccccgtgacccccaccccatgacaggccctggtgtgtggtgttccctgccctttgtccaagtgttctcattgttcaattcccacctgtgagggagaacatgcggtatttggttttctgtccttgtgatagtttgcttagaatgatggtttccagctgcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccata-tttcttaatccagtctatcactgatggacatttgggttggttccacgtctttgctattgtgaatagtgccgcagcaaacatacgtgtgcatgcgtctttatagtagcatgatttataagcctttgggtacatacccagtaataggattgctgggtcaaatggtatttctagttctagatcctt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2068346 579 - 2193130 GAAGATAATTCTTtttttt-tta-aatttttaaattatacttcaagtctagggtacatgtgcacaacgtgcaggtttgttacataggtatacctgtgccatgtttgtttgctgcacccgttaactcatcatttacattaggtatttctcctaatgctatccctccccctgacccccaccccatgacaggccctggggtgtggtgttccctgccctttgtccaagtgttctcattgttcaatttccacctatgagtgagaacatgtggtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagttgcatccatgtccctacaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcatagttggacatttgggttggttccaagtctttgctattgtgaatagtgctgcagcaaacatacaggtgcatgaatctttatagtagcatgatttataatcctctgggtatatacccagtaatgggattgctgggtcaaatggtatttctagttctagatcctt i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21495501 1030 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e otoGar3.GL873537 22851371 0 + 28711273 C e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=1500.000000 s hg38.chr17_JH159148v1_alt 25902 1 + 88070 g s panTro5.chr17 16337001 1 + 83181570 g i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241879 1 + 83442489 g i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088565 1 + 4267968 g i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2068925 1 - 2193130 g i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851371 1 + 28711273 G i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21495501 1030 + 61074082 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=61181.000000 s hg38.chr17_JH159148v1_alt 25903 45 + 88070 aagaTAATTCTAACTGATTATGGAGGTGAGAAGCAGGACACAGGA s panTro5.chr17 16337002 45 + 83181570 aagaTAATTCTAACTGATTATGGAGGTGAGAAGCAGGACACAGGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241880 45 + 83442489 aagaTAATTCTAACTGATTATGGAGGTGAGAAGCAGGACACAGGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088566 45 + 4267968 aagaTAATTCTAACTGATTATGGAGGTGAGAAGCAGGACACAGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2068926 45 - 2193130 aggaTATTTCTAACTGATTATGGAGGTGAGAAGCAGGACACAGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851372 45 + 28711273 AAGATAATTCTAAGTGAACATGAAAGTGAGAAGCAGGACACAGAA i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 39590140 37 - 61074082 AAGATACTTGCATCTAAAGATGA-------AAGCAGGAGA-AAGA i canFam3.chr9 n 1030 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e dasNov3.JH570468 496796 26659 - 852752 T e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=44430.000000 s hg38.chr17_JH159148v1_alt 25948 42 + 88070 ATAATGAGTACATT--GATATAACGTGGTTGATATTGGGCGTTT s panTro5.chr17 16337047 42 + 83181570 ATAATGAGTACATT--GATATAACGTGGTTGATATTGCGCGTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241925 42 + 83442489 ATAATGAGTACATT--GATATAACGTGGTTGATATTGCGCGTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088611 42 + 4267968 ATAATGAGTACATT--GATATAACGTGGTTGATATTGGGTGTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2068971 42 - 2193130 ATAATGAGTACGTT--GATATAACGTGGTTGATATTGGGCGTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851417 41 + 28711273 CTAACCAGTGCCCT--GAGATAAGATGGGT-ATATTGATCATTT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 39590177 40 - 61074082 ACCACGAGCACGTT--GAAA-AATATATATAATTATGAA-GTTT i canFam3.chr9 C 0 T 444 s dasNov3.JH570468 470137 32 - 852752 ATAATGAGTACACTAGGAAAAAACATGATTGT------------ i dasNov3.JH570468 T 26659 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=2373.000000 s hg38.chr17_JH159148v1_alt 25990 4 + 88070 GCAG-- s panTro5.chr17 16337089 4 + 83181570 GCAG-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241967 4 + 83442489 GCAG-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088653 4 + 4267968 GCAG-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069013 4 - 2193130 GCAG-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851458 4 + 28711273 GCGG-- i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 470169 4 - 852752 --AAAT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 39590217 444 - 61074082 T e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=38749.000000 s hg38.chr17_JH159148v1_alt 25994 27 + 88070 CAATATTGATCAGTTGCAGAGACTTAA s panTro5.chr17 16337093 27 + 83181570 CAATATTGATCAGTTGCAGAGACTTAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241971 27 + 83442489 CAATATTGATCAGTTGCAGAGACTTAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088657 27 + 4267968 CAATATTGATCAGTTGCAGAGACTTAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069017 27 - 2193130 GAATATTGATCAGTTGCAGAGACTTAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851462 27 + 28711273 TGATGTTGATCAACTGCAAAGATTTGA i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21496531 26 + 61074082 CAGTACTGGTCA-CTGCGGAGAGCTAA i canFam3.chr9 I 1030 C 0 s dasNov3.JH570468 470173 25 - 852752 AAATAGGAACC--TGGAAGAAACCTAA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1899902 1918 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=241253.000000 s hg38.chr17_JH159148v1_alt 26021 182 + 88070 GAGAACAGTCTTAGGGATTTGATATTTTAAGATTGTTAGAGGGAA---AA---GGGGATGACAATTTTTCCTTGGCTGAGAT---------------------------CTTGAGTTCATGTCAAGGATCCATGAAGATGACT----AGCAGC-------------------TGGCACTCTGAT--ATATAGGAAATAAGGA-----AGAGAAAAATCAAAGTGAAGCCAGCTCCA---CTTCACTAA s panTro5.chr17 16337120 182 + 83181570 GAGAACAGTCTTAGGGATTTGATATTTTAAGATTGTTAGAGGGAA---AA---GGGGATGACAATTTTTCCTTGGCTGAGAT---------------------------CTTGAGTTCATGTCAAGGATCCATGAAGATGACT----AGCAGC-------------------TGGCACTCTGAT--ATATAGGAAATAAGGA-----AGAGAAAAATCAAAGTGAAGCCAGCTCCA---CTTCACTAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16241998 182 + 83442489 GAGAACAGTCTTAGGGATTTGATATTTTAAGATTGTTAGAGGGAA---AA---GGGGATGACAATTTTTCCTTGGCTGAGAT---------------------------CTTGAGTTCATGTCAAGGATCCATGAAGATGACT----AGCAGC-------------------TGGCACTCTGAT--ATATAGGAAATAAGGA-----AGAGAAAAATCAAAGTGAAGCCAGCTCCA---CTTCACTAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088684 182 + 4267968 GAGAACAGTCTTAGGGATTTGATATTTTAAGACTGTTAGAGGGAA---AA---GGGGATGACAATTTTTCCTTGGCTGAGAT---------------------------CTTGAGTTCATGTCAAGGATCCACGAAGATGACT----AGCAGC-------------------TGGCACTCTGAT--ATATAGGAAATAAGGA-----AGAGAAAAATCAAAGTGAAGCCAGCTCCA---CTTCACTAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069044 182 - 2193130 GAGAACAGTCTTAGGGATTTGATATTTTAAGATTGTTAGAGGGAA---AG---GGGGATGACAATTTTTCCTTGGCTGAGAT---------------------------CTTGAGTTCATGTCAAGGATCCATGAAGATAACT----AGCAGC-------------------TGGCACTCTGAC--ATATAGGAAATGAGGA-----AGAGAAAAATCAAAGTGAAGCCAGCTCCA---CTTCACTAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1901820 184 + 3513951 ATATGCAGTCATAAGAATTT--CTTTTTAAGTTCCATAGGGGCAA---AA---GCTGATGATCA-CTTCCTGAGGCTGAGAC---------------------------CATGTATCCATGTCAATTAG--GTGGAGCTGACTGACCATCATC-------------------TGGTACATTAAT--CCAGAGGAAATGAAGA-----ACAATAAAATTAAAGAAAAGTAGACTGTATACCTTCAGTAG i saiBol1.JH378271 I 1918 T 33348 s otoGar3.GL873537 22851489 211 + 28711273 GAGAACAGTCCTAAGGATTC-ATTTTTGGGGGTTCTTAGAGGGAG---AAGGGGGGGGTGGCAACTTTTCTAAGGCTGAGATTTCATGATTTCATGTTTAAGGCTGAGATTTGATTTCATGTCAAGGGCTGATGAACCTGACT----AGCGGC-------------------TGGAACACCCAT--CCACAGGAAATAAGGA-----AGACAAGACTTAAAGGGAAGCAGGCTCCA---CTTCACCAA i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21496557 194 + 61074082 CTATGCACTCATAAGAATGTG----TTTATATGCTGTAGAAAGAAGTGAA---GGTGATGATCACTTTTTGGAGACTGAGAG---------------------------TGTGAATCAGTG------------GATGTTGACC----AGCATCTGGGGTTGACCAAATGTTGTGGCTCAGCAATTGCTATAGTAAACCAGAGATACTAGAATACAATCAAATTGAAGTAGATTGCA---TTTCCTCC- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470198 175 - 852752 GAAAATTTTCATAAGGATTTG--TTTTGGGGTTATTTTGAGGGAA---AG---AGTGATGGTCCATTTTC-AAGGCAGAGTC---------------------------AATGTCTGCAGGTCAAGGACACCTGAAGAACACC----TTCAAT-------------------GTTCACAGAGAG--AAGCAGCAAATAAAGA-----AGAT----ATCAGAGTGAAGCTGAATGCA---CCCTGCAAA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=31788.000000 s hg38.chr17_JH159148v1_alt 26203 37 + 88070 GCAGCCTCACAA------TTTAACAATA--------TAACACATCAAATG-T s panTro5.chr17 16337302 37 + 83181570 GCAGCCTCACAA------TTTAACAATA--------TAACACATCAAATG-T i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242180 37 + 83442489 GCAGCCTCACAA------TTTAACAATA--------TAACACATCAAATG-T i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088866 37 + 4267968 GCAGCCTCACAA------TTTAACAATA--------TAACACATCAAATG-T i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069226 37 - 2193130 GCAGCCTCACAA------TTTAACAATA--------TAACACATCAGATG-T i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851700 38 + 28711273 GAAGCCTCACAG------TTTAATGAGA--------AAACTAACAGCATGTT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21496751 43 + 61074082 GTAGACTCATGAGCATTGTTGAGAAAGA--------TGACAGGGGCAGTG-T i canFam3.chr9 C 0 T 17021 s dasNov3.JH570468 470373 45 - 852752 GCTGAATCATAAAGAC--TTTAATCACAAAGATGAGTAATAGAAAAA----- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1902004 33348 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=9789.000000 s hg38.chr17_JH159148v1_alt 26240 6 + 88070 TTGGCA s panTro5.chr17 16337339 6 + 83181570 TTGGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242217 6 + 83442489 TTGGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088903 6 + 4267968 TTGGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069263 6 - 2193130 TTGGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851738 6 + 28711273 TTGGCA i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 470418 5 - 852752 -TGGTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e canFam3.chr9 21496794 17021 + 61074082 T e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1902004 33348 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=33969.000000 s hg38.chr17_JH159148v1_alt 26246 27 + 88070 ACAGTATGTTGGTTGTCAACAAAGTCA-------------------------- s panTro5.chr17 16337345 27 + 83181570 ACAGTATGTTGGTTGTCAACAAAGTCA-------------------------- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242223 27 + 83442489 ACAGTATGTTGGTTGTCAACAAAGTCA-------------------------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088909 27 + 4267968 ACAGTATGTTGGTTGTCAACAAAGTCA-------------------------- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069269 27 - 2193130 ACAGTATACTGGTTGTCAACAAAGTCA-------------------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851744 23 + 28711273 ACAGCAT----GTTGTCAGCAAAACCA-------------------------- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21479773 27 + 61074082 ACAGCAGGTTGGTTGGCAGCAAGGCTG-------------------------- i canFam3.chr9 T 17021 I 115 s dasNov3.JH570468 470423 53 - 852752 ATGACATGTTGGAGGTTACCAAAACCTGCTGAAGGAGCTTGTGCCAGTATCTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1902004 33348 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=13258.000000 s hg38.chr17_JH159148v1_alt 26273 17 + 88070 GGGGAGTG----------------GGAGTTAGT s panTro5.chr17 16337372 17 + 83181570 GGGGAGTG----------------GGAGTTAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242250 17 + 83442489 GGGGAGTG----------------GGAGTTAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088936 17 + 4267968 GGGGAGTG----------------GGAGTTAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069296 17 - 2193130 GGGGAGTG----------------GGAGTTAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851767 7 + 28711273 GGAG--------------------------AGT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21479915 17 + 61074082 GTGGAGCA----------------GCAACTGGA i canFam3.chr9 I 115 I 3 s dasNov3.JH570468 470476 33 - 852752 GGGAAGTGACTGGTTGATTGTGAAAAGGTTGGT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22119471 1745 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1902004 33348 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=-1159.000000 s hg38.chr17_JH159148v1_alt 26290 6 + 88070 ----------TCATTG---- s panTro5.chr17 16337389 6 + 83181570 ----------TCATTG---- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242267 6 + 83442489 ----------TCATTG---- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088953 6 + 4267968 ----------TCATTG---- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069313 6 - 2193130 ----------TCGTTG---- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22851774 6 + 28711273 ----------TTATTG---- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121216 6 - 122082543 ----------tcatca---- i mm10.chr11 I 1745 C 0 s canFam3.chr9 21479935 3 + 61074082 ----------GCA------- i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 470509 20 - 852752 CTATGCCAGATGATCCTATG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e saiBol1.JH378271 1902004 33348 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=5482.000000 s hg38.chr17_JH159148v1_alt 26296 2 + 88070 GT s panTro5.chr17 16337395 2 + 83181570 GT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242273 2 + 83442489 GT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088959 2 + 4267968 GT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069319 2 - 2193130 GT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1868656 2 + 3513951 GC i saiBol1.JH378271 T 33348 C 0 s otoGar3.GL873537 22851780 2 + 28711273 GT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121222 1 - 122082543 -t i mm10.chr11 C 0 I 1 s canFam3.chr9 21479938 2 + 61074082 GC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470529 2 - 852752 GT i dasNov3.JH570468 C 0 I 18 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e manLeu1.NW_012106252v1 2173009 61605 + 4244037 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2196051 9016 + 4569836 I e chlSab2.chr16 64933299 2808 + 75148670 I e cerAty1.NW_012006043v1 1988677 2805 - 8458610 I e macNem1.NW_012014910v1 2103372 29563 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=25037.000000 s hg38.chr17_JH159148v1_alt 26298 3 + 88070 AAG s panTro5.chr17 16337397 3 + 83181570 AAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242275 3 + 83442489 AAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088961 3 + 4267968 AAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069321 3 - 2193130 AAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132935 3 + 10377808 AAG i macNem1.NW_012014910v1 I 29563 C 0 s cerAty1.NW_012006043v1 1991482 3 - 8458610 AAG i cerAty1.NW_012006043v1 I 2805 C 0 s chlSab2.chr16 64936107 3 + 75148670 AAG i chlSab2.chr16 I 2808 C 0 s manLeu1.NW_012106252v1 2234614 3 + 4244037 AAG i manLeu1.NW_012106252v1 I 61605 C 0 s colAng1.NW_012122154v1 2205067 3 + 4569836 AAG i colAng1.NW_012122154v1 I 9016 C 0 s saiBol1.JH378271 1868658 3 + 3513951 AGG i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22851782 3 + 28711273 AAG i otoGar3.GL873537 C 0 I 2450 s mm10.chr11 22121224 3 - 122082543 atG i mm10.chr11 I 1 C 0 s canFam3.chr9 21479940 3 + 61074082 AAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470549 3 - 852752 AAG i dasNov3.JH570468 I 18 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=52419.000000 s hg38.chr17_JH159148v1_alt 26301 6 + 88070 GCTGGT s panTro5.chr17 16337400 6 + 83181570 GCTGGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242278 6 + 83442489 GCTGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088964 6 + 4267968 GCTGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069324 6 - 2193130 TCTGGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132938 6 + 10377808 GCTGGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991485 6 - 8458610 GCTGGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936110 6 + 75148670 GCTGGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234617 6 + 4244037 GCTGGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205070 6 + 4569836 GCTGGC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868661 6 + 3513951 GCTGGC i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22854235 6 + 28711273 GCTGGC i otoGar3.GL873537 I 2450 C 0 s mm10.chr11 22121227 6 - 122082543 GCTGGC i mm10.chr11 C 0 C 0 s canFam3.chr9 21479943 6 + 61074082 GCTGGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470552 6 - 852752 GCTGGC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1905460 3045 + 1920343 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=55875.000000 s hg38.chr17_JH159148v1_alt 26307 5 + 88070 AGCAG s panTro5.chr17 16337406 5 + 83181570 AGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242284 5 + 83442489 AGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088970 5 + 4267968 AGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069330 5 - 2193130 AGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132944 5 + 10377808 AGCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991491 5 - 8458610 AGCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936116 5 + 75148670 AGCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234623 5 + 4244037 AACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205076 5 + 4569836 AGCAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868667 5 + 3513951 AGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908505 5 + 1920343 AGCAG i cebCap1.NW_016107730v1 I 3045 C 0 s otoGar3.GL873537 22854241 5 + 28711273 AGCAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121233 5 - 122082543 AGCAG i mm10.chr11 C 0 C 0 s canFam3.chr9 21479949 5 + 61074082 AGCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470558 5 - 852752 AGCAG i dasNov3.JH570468 C 0 I 279 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=124206.000000 s hg38.chr17_JH159148v1_alt 26312 13 + 88070 CTGGACTCACAGT s panTro5.chr17 16337411 13 + 83181570 CTGGACTCACAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242289 13 + 83442489 CTGGACTCACAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088975 13 + 4267968 CTGGACTCACAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069335 13 - 2193130 CTGGACTCACAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132949 13 + 10377808 CTGGACACACAGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991496 13 - 8458610 CTGGACACACAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936121 13 + 75148670 CTGGACACACAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234628 13 + 4244037 CTAGACACACAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205081 13 + 4569836 CTGGACACACAGC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868672 13 + 3513951 CTGGACACACAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908510 13 + 1920343 CTGGACCCACAGC i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854246 13 + 28711273 CTGGATCCACAGC i otoGar3.GL873537 C 0 I 117 s mm10.chr11 22121238 13 - 122082543 CTAGACCCACAGC i mm10.chr11 C 0 C 0 s canFam3.chr9 21479954 13 + 61074082 CTGGACACACAGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470842 13 - 852752 CTGGACCCACAGC i dasNov3.JH570468 I 279 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=259502.000000 s hg38.chr17_JH159148v1_alt 26325 33 + 88070 AGGTGGGCTGGCAGCAGGGTGGGCTGCAGCAGG s panTro5.chr17 16337424 33 + 83181570 AGGTGGGCTGGCAGCAGGGTGGGCTGCAGCAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242302 33 + 83442489 AGGTGGGCTGGCAGCAGGGTGGGCTGCAGCAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4088988 33 + 4267968 AGGTGGGCTGGCAGCAGGGTGGGCTGCAGCAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069348 33 - 2193130 AGGTGGGCTGGCAGCAGGATGGGCTGCAGCAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132962 33 + 10377808 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991509 33 - 8458610 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936134 33 + 75148670 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234641 33 + 4244037 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205094 33 + 4569836 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868685 33 + 3513951 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908523 33 + 1920343 AGGTGGGCCGGCAGCAGGGTGTGCTGCAGCAGG i cebCap1.NW_016107730v1 C 0 I 181 s otoGar3.GL873537 22854376 33 + 28711273 AGCTGGGCTGGCAGCAGGGTGTGCTACAGCAGG i otoGar3.GL873537 I 117 C 0 s mm10.chr11 22121251 29 - 122082543 AGCAGAGATGGTGGCACACTGTGCTGCAG---- i mm10.chr11 C 0 C 0 s canFam3.chr9 21479967 18 + 61074082 ATGTGGGCTTGCAGCAGG--------------- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470855 33 - 852752 AGGTGGGCTGGCAGCAGGGAGTGCTGCAACAGG i dasNov3.JH570468 C 0 I 15 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=64303.000000 s hg38.chr17_JH159148v1_alt 26358 10 + 88070 TGGTCACACA s panTro5.chr17 16337457 10 + 83181570 TGGTCACACA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242335 10 + 83442489 TGGTCACACA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089021 10 + 4267968 TGGTCACACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069381 10 - 2193130 TGGTCACACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132995 10 + 10377808 TGGTCACACA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991542 10 - 8458610 TGGTCACACA i cerAty1.NW_012006043v1 C 0 I 28572 s chlSab2.chr16 64936167 10 + 75148670 TGGTCACACA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234674 10 + 4244037 TGGTCACACA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205127 10 + 4569836 TGGTCACACA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868718 10 + 3513951 TGGTCACACA i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22854409 10 + 28711273 TGGTGACAGA i otoGar3.GL873537 C 0 I 15 s mm10.chr11 22121280 1 - 122082543 ---------A i mm10.chr11 C 0 I 1 s dasNov3.JH570468 470903 10 - 852752 TGGGCACACA i dasNov3.JH570468 I 15 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1908556 181 + 1920343 I e canFam3.chr9 21479985 0 + 61074082 C e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=9100.000000 s hg38.chr17_JH159148v1_alt 26368 1 + 88070 G s panTro5.chr17 16337467 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242345 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089031 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069391 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133005 1 + 10377808 G i macNem1.NW_012014910v1 C 0 I 9 s cerAty1.NW_012006043v1 2020124 1 - 8458610 G i cerAty1.NW_012006043v1 I 28572 C 0 s chlSab2.chr16 64936177 1 + 75148670 G i chlSab2.chr16 C 0 I 9 s manLeu1.NW_012106252v1 2234684 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 I 9 s colAng1.NW_012122154v1 2205137 1 + 4569836 G i colAng1.NW_012122154v1 C 0 I 9 s saiBol1.JH378271 1868728 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22854434 1 + 28711273 G i otoGar3.GL873537 I 15 C 0 s mm10.chr11 22121282 1 - 122082543 G i mm10.chr11 I 1 C 0 s dasNov3.JH570468 470913 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1908556 181 + 1920343 I e canFam3.chr9 21479985 0 + 61074082 C e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=2903.000000 s hg38.chr17_JH159148v1_alt 26369 2 + 88070 AC s panTro5.chr17 16337468 2 + 83181570 AC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242346 2 + 83442489 AC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089032 2 + 4267968 AC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069392 2 - 2193130 AT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2020125 2 - 8458610 AT i cerAty1.NW_012006043v1 C 0 C 0 s saiBol1.JH378271 1868729 2 + 3513951 GT i saiBol1.JH378271 C 0 I 15 s otoGar3.GL873537 22854435 2 + 28711273 GT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121283 2 - 122082543 AT i mm10.chr11 C 0 C 0 s canFam3.chr9 21479985 1 + 61074082 -T i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470914 2 - 852752 GT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1908556 181 + 1920343 I e manLeu1.NW_012106252v1 2234685 9 + 4244037 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205138 9 + 4569836 I e chlSab2.chr16 64936178 9 + 75148670 I e macNem1.NW_012014910v1 2133006 9 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=255245.000000 s hg38.chr17_JH159148v1_alt 26371 63 + 88070 GGTCCTGTAGCAGGTGATTGCACAGCAAATTGGGCCAC---------------AGCAAGGCGGGCGGGAGCTGGACCC s panTro5.chr17 16337470 63 + 83181570 AGTCCTGTAGCAGGTGATTGCACAGCAAGTTGGGCCAC---------------AGCAAGGCGGGCGGGAGCTGGACCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242348 63 + 83442489 AGTCCTGTAGCAGGTGATTGCACAGCAAGTTGGGCCAC---------------AGCAAGGCGGGCGGGAGCTGGACCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089034 63 + 4267968 AGTCCTGTAGCAGGTGATTGCACAGCAAGTTGGGCCAC---------------AGCAAGGCGGGCAGGAGCTGGACCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069394 63 - 2193130 GGTCCTGTAGCAGGTGATTGCACAGCAAGTTGGGCGAC---------------AGCAAGGCAGGCAGGAGCTGGACCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2020127 63 - 8458610 GGGCTGGCAGCAGGTGTTTTGACAGCAAATTGGGTGGC---------------AGCAAGGCTGGCAGCAGCTGGACAC i cerAty1.NW_012006043v1 C 0 C 0 s saiBol1.JH378271 1868746 63 + 3513951 AGTCCTGCAGCAGGTGTTTTGACAGCAAGTTGGGCGGC---------------AGCAAGGCTGGCAGCAGCTGGACAC i saiBol1.JH378271 I 15 C 0 s cebCap1.NW_016107730v1 1908737 63 + 1920343 GGTCCTGCAGCAGGTGTTTTGACAGCAAGTTGGGCGGC---------------AGCAAGGCTGGTAGCAGCTGGACAC i cebCap1.NW_016107730v1 I 181 C 0 s otoGar3.GL873537 22854437 63 + 28711273 GGTCCTGCAGCAGGTGGTTGGACAGCAAGTGGGGCGGC---------------AGCAGGGCTGGCAGCAGCTGGACTC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121285 78 - 122082543 AGTCCTGCAGAAGGTGGCTTCACAGCAAGTTGGTTGGCCCCAGTTGGTCTGGTAACAGAGAGTGAGGCAACTGAGAGT i mm10.chr11 C 0 C 0 s canFam3.chr9 21479986 66 + 61074082 GGTCCTACAGCAGGTGGTTTGACAGCAAGTTGGGCGGC------------AGCAGCAAGGTTGGCAGCAGCTGGACCC i canFam3.chr9 C 0 I 91 s dasNov3.JH570468 470916 63 - 852752 TGGCTGGCAGCAGGTGGTCCTACAGCAGAGTGGGCGGC---------------AGCAAGGCTGGCAGCAGCTAGGCCC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e manLeu1.NW_012106252v1 2234685 9 + 4244037 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205138 9 + 4569836 I e chlSab2.chr16 64936178 9 + 75148670 I e macNem1.NW_012014910v1 2133006 9 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=3785.000000 s hg38.chr17_JH159148v1_alt 26434 1 + 88070 A s panTro5.chr17 16337533 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242411 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089097 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069457 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2020190 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 T 28629 s saiBol1.JH378271 1868809 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908800 1 + 1920343 A i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854500 1 + 28711273 A i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121363 1 - 122082543 G i mm10.chr11 C 0 I 12 s dasNov3.JH570468 470979 1 - 852752 A i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e canFam3.chr9 21480052 91 + 61074082 I e manLeu1.NW_012106252v1 2234685 9 + 4244037 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205138 9 + 4569836 I e chlSab2.chr16 64936178 9 + 75148670 I e macNem1.NW_012014910v1 2133006 9 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=59460.000000 s hg38.chr17_JH159148v1_alt 26435 6 + 88070 CAGCAG s panTro5.chr17 16337534 6 + 83181570 CAGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242412 6 + 83442489 CAGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089098 6 + 4267968 CAGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069458 6 - 2193130 CAGCCG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133015 6 + 10377808 CAGCAG i macNem1.NW_012014910v1 I 9 C 0 s cerAty1.NW_012006043v1 1991562 6 - 8458610 CAGCAG i cerAty1.NW_012006043v1 T 28629 C 0 s chlSab2.chr16 64936187 6 + 75148670 CAGCAG i chlSab2.chr16 I 9 C 0 s manLeu1.NW_012106252v1 2234694 6 + 4244037 CAGCAG i manLeu1.NW_012106252v1 I 9 C 0 s colAng1.NW_012122154v1 2205147 6 + 4569836 CAGCAG i colAng1.NW_012122154v1 I 9 C 0 s saiBol1.JH378271 1868810 6 + 3513951 CAGCAG i saiBol1.JH378271 C 0 I 6723 s cebCap1.NW_016107730v1 1908801 6 + 1920343 CAGCAG i cebCap1.NW_016107730v1 C 0 I 398 s otoGar3.GL873537 22854501 6 + 28711273 CAGCAG i otoGar3.GL873537 C 0 I 57 s mm10.chr11 22121376 6 - 122082543 CAGCAG i mm10.chr11 I 12 C 0 s canFam3.chr9 21480143 6 + 61074082 CAGCAG i canFam3.chr9 I 91 C 0 s dasNov3.JH570468 470980 6 - 852752 CAAGAA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=195799.000000 s hg38.chr17_JH159148v1_alt 26441 31 + 88070 ATGCTCCTGTAGCAGGTGGTCTTGCAGCACA s panTro5.chr17 16337540 31 + 83181570 ATGCTCCTGTAGCAGGTGGTCTTGCAGCACA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242418 31 + 83442489 ATGCTCCTGTAGCAGGTGGTCTTGCAGCACA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089104 31 + 4267968 ATGCTCCTGTAGCAGGTGGTCTTGCAGCACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069464 31 - 2193130 ATGGTCCTGTAGCAGGTGGTCTTGCAGCACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133021 31 + 10377808 GTGGTCCTGCAGCAGGTGGTCCTGCAGCACG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991568 31 - 8458610 GTGGTCCTGCAGCAGGTGGTCCTGCAGCACG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936193 31 + 75148670 GTGGTCCTGCAGCAGGTGGTCCTGCAGCACG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234700 31 + 4244037 GTGGTCCTGCAGCAGGTGGTCCTGCAGCACG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205153 31 + 4569836 GTGGTCCTGCAGCAGGTGGTCCTGCAGCACG i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22854564 31 + 28711273 GTGGTCCTGCAGCAGGTGGTCCTGCAGCAGG i otoGar3.GL873537 I 57 C 0 s mm10.chr11 22121382 29 - 122082543 GGGTACCCACAGCAGCTGGGCTGGCAGCA-- i mm10.chr11 C 0 C 0 s canFam3.chr9 21480149 31 + 61074082 GTGGTCCTGCAGCAGGTGGTCCTGCAGCATG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 470986 31 - 852752 CTGGACCCACAGCAGGTGGGCTGGCAGCAGG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1908807 398 + 1920343 I e saiBol1.JH378271 1868816 6723 + 3513951 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=1855642.000000 s hg38.chr17_JH159148v1_alt 26472 309 + 88070 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---ACTGGGTCATGATGTCAGGGGTGGAGGG-TGGGCTCCTGTTTAGAGGTAAATTTCCCGGAATCTGATG---ACTCCTTCCAATCTGGACCTTCTATACACTAAGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTAC-ATTGTTTTCCGTAGT---CAGTTTG-GG-ATTATTGAAGAGGATGTTGTTTCCTAAATATTATAGATCTTCTGAGAGTAAGGGCTTAATCTGTTTCTTAATTGAGAATAACTGTTAGAAACTTTG-----TTTCAGATAAAAGGAA s panTro5.chr17 16337571 309 + 83181570 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---ACTGGGTCATGATGTCAGGGGTGGAGGG-TGGGCTCCTGTTTAGAGGTAAATTTCCCGGAATCTGATG---ACTCCTTCCAATCTGGACCTTCTATACACTGAGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTAC-ATTGTTTTCCATAGT---CAGTTTG-GG-ATTATTGAAGAGGAAGTTGTTTCCTAAATATTATAGATCTTCTGAGAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATAACTGTTAGAAACTTTG-----TTTCAGATAAAAGGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242449 309 + 83442489 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---ACTGGGTCATGATGTCAGGGGTGGAGGG-TGGGCTCCTGTTTAGAGGTAAATTTCCCGGAATCTGATG---ACTCCTTCCAATCTGGACCTTCTATACACTGAGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTAC-ATTGTTTTCCATAGT---CAGTTTG-GG-ATTATTGAAGAGGAAGTTGTTTCCTAAATATTATAGATCTTCTGAGAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATAACTGTTAGAAACTTTG-----TTTCAGATAAAAGGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089135 309 + 4267968 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---ACTGGGTCATGATGTCAGGGGTGGAGGG-TGGGCTCCTGTTTAGAGGTAAATTTCCCGGAATCTGATG---ACTCCTTCCAATCCGGACCTTCTATACACTGAGCCTCC-AAAGTTTCCAACAATAAGCAGGACTTTTCCTTGTTGTTGTTTAC-ATTGTTTTCCATAGT---CAGTTTG-GG-GTTATTGAAGAGGAAGTTGTTTCCTAAATATTATAGATCTTCTGAGAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATAACTGTTAGAAACTTTG-----TTTCAGATAAAAGGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069495 305 - 2193130 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---AGTGGGTCATGGTGTCA-GGGTGGAGGC-TGGGCTCCTGTTTAGAGGTAAATTTCCCAGAATCTGATG---ACTCCTTCCAATCTGGACTTTCTATACACTGAGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCC---TTGTTGTTTAC-ATTGTTTTCCACAGT---CAGTTTG-GG-ATTATCAAAGAGGAAGTTGTTTCCTAAATGTTATAGATCTTCTGAGAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATAAGTGTTAGAAACTTTG-----TTTCAGATAAAAGGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133052 309 + 10377808 TAGGCTGACAGCAAGGGG----------------------------------------------AGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAAGG-TGGGCTTCTATTCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTAC-ATTGTTTTTCATACG---CACTTTG-CG-ATCGTCAAAGGGGAAGTTGTTTCTGAAATCTTATGAATCTGTTGAAAGTAAGTGTTTAATCTGTTTGTTAATTGAGAATTACTCATAAAAACTTCG-----TTTCAGATAAAAGGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991599 308 - 8458610 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAGGG-TGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTAC-GTTGTTTTCTATAGT---CAGTCTG-GG-ACTGTCAAAGGGGAAGTTGTTTCCTAAAGATTATGAATCTTTTGAAAGTAAGGGTTTAATATGTCTCTTAATTGTG-TTTACTCATAGAAACTTTG-----TTTCAGATAAAAGGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936224 308 + 75148670 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAGGG-TGGGTTTCTGATCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATTGGGACCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTAC-ATTGTTTTCTATAGT---CAGTTTG-GG-ACTGTCAAAGGGGAAGTTGTTTCCTAAAGATTATGAATCTTTTTAAAGTAAGGGTTTAATATGTCTCTTAATTGTG-TTTACTCATAGAAACTTTG-----TTTCAGATAAAAGGAA i chlSab2.chr16 C 0 I 36764 s manLeu1.NW_012106252v1 2234731 309 + 4244037 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAGGG-TGGGTTTCTATTCAGAGGTGAGTTTCCCAGGATGTGATG---ACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCATCAGGACTTTTTCTTGTTGCTGTTTAC-ATTGTTTTTCATACT---CCCTTTG-CG-ATCGTCAAAGGGGAAGTTGTTTCTGAAATCTTATGAATCTGTTGAAAGTAAATGTTTAATCTGTTTGTTAATTGAGAATTACTCATAAAAACTTTG-----TTTCAGATAAAAGGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205184 310 + 4569836 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAAC---AGTTGGTCATGGTGTCAGGCGTGAAGGG-TGGGCTTCTGTTCAGAGGTGAATTTCCCAGAATCTGATG---ACCCCTTGCAATCTAGACCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCTGCAGGATTTTTCTTTGTTGCTGTTTACAATTGTTTTCCATAGT---CAGTTTG-GC-ATTGTCAAAGAGGAAGTCATTTCCTAAATGTTATGAATCTTTGGAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTTG-----TTTCAGATAAAAGGAA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1875539 309 + 3513951 TAGGCTGGCAGCAAGGGG----------------------------------------------AGCAGC---AGTGGGTCATGGTGTCAGGGGTGGATGG-TGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAATCTGATG---ACTCCTTCCAATCTGGGCCTTTTATACATCTGGCCTCC-AACGTTTCCACCAATCAGCAGGACTTCTCATTGTTGCTGTTTAC-ATTGTTTTCTATAGT---CAGTTTG-GG-ATTATCAAAGAGGAAGTCATTTACTAAATGCTATGAATCTTTTGAAAGTAAGAGTTTAATCTGTTTCTTACTTGTGAATTACTCATAGAAATGTTG-----TTTTAAGTAAAAGGAA i saiBol1.JH378271 I 6723 C 0 s otoGar3.GL873537 22854595 308 + 28711273 TGGACTGGCAACAAGGGG----------------------------------------------AGCAAC---AGTGGGTCATGGTGTCT-GTGTGGAGGG-TGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGCTG---ATGTCTTCCAATGTGGACCTTTTATACACGGGGCCTCC-AAAGTTTGGACCAATGGACAGAATTTTTCCTTATTATTGTTGAC-ACTGTTTTCCATAATTACCAGCT---GA-ATTAAGAAGGAGGAAGTTGTTTCCTAAGGGTTAAAACTCTTTCAATAGTAAGTGTTTAATCTGTTTCTTAATTGAGAATCACTCATTGAAACTTC------TTTCAGGTAAAAGGAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121411 341 - 122082543 -GGACTGGCAGCAGCTGGTCACCCAGCTTGGTCTCCAGTAGGTGGCTCTGCAACAGCTAGGAACAGTAGG---AATGGGTCATGGTATTAGATATGGAGGGTTGGGCTTCTCTTCAATGGTCAGTTTTCCAGAATACAATG---ACATTTTTCTATGTAGGCCTTTTGTATACCAGATCCTC-ATAGTATAGACCAACCAGAAGGTCTTTCC-------TTGTTTCT-ACAATATTTCACATC---CAGTTTG-AT-GTTGTCAAAGGAAGCATGGCTCTCCCAATGTTATGAAGTTTTTCA-AGCAAGGA-----------TCTTAACTGAAAACAACTCATTAAAAAGATGAACCTTTGCAGGCAGAAGGAA i mm10.chr11 C 0 C 0 s canFam3.chr9 21480180 312 + 61074082 TAGGCTGGCAGTAAGGGG----------------------------------------------AGCAGAATGAACCAGTCATGCTGTCAGTGGTGGAAGG-TGAGCTTCTGTTTTGCGTTGTGGTTTTTAGATTCTGTTACCTATTCCTTCCATTCTGGGGCTTTTATACACTGGACCTCCTGACATTTGGACCAATGGGCACGACGT-TCCTTGTTGTTGTTTAA-ATAATTTTCAATAAT---CACTGAG-GGAAGTGTAAAAGAGGAAGTTG-TTCCGAAATGTTATGAATCCTTAGGAAATAATTGCTT-ATTTGCTTCTTAATTGAGAATAACTCATAGAAACAT-------TCTCAGAAGGAAGGAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 471017 298 - 852752 TGGGCTGGCAGCAGGGAG----------------------------------------------AGCAGC---AGGAAGTCATGGTGTCA-CGGTGGTGGG---GGCTCCTGTTCAGAGGTG---TTTCCAGAATCTGATG---GCTCCTTTAATTCTGCATCTTTTATATACTGGGCC-CC-AATATTTGGACCAATAGGCAAGTCTTTTCCTTGTTGTTGTTGAG-GTTGTTTTCCACAGA---TACAGAGCAA-ATTGTCAAGAAGGAAGTT--TTTCCTGATGTTTTCCTTCTGTTGAAAATAAGTGTTTAATCGTTTTCTTAATTAAGAGT-GTTCATAGAATCTT-------TTTCAGACATAGGGAA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1908807 398 + 1920343 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=7085.000000 s hg38.chr17_JH159148v1_alt 26781 1 + 88070 G s panTro5.chr17 16337880 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242758 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089444 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069800 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133361 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991907 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 I 42010 s chlSab2.chr16 64973296 1 + 75148670 A i chlSab2.chr16 I 36764 C 0 s manLeu1.NW_012106252v1 2235040 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205494 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1875848 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22854903 1 + 28711273 G i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121752 1 - 122082543 G i mm10.chr11 C 0 C 0 s canFam3.chr9 21480492 1 + 61074082 G i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 471315 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1908807 398 + 1920343 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=385863.000000 s hg38.chr17_JH159148v1_alt 26782 60 + 88070 GTGGTCACATCATTGACATCCTTCCTGCTCTGGTCATCATGTGGTCATGTG--ATAGTTCCT s panTro5.chr17 16337881 60 + 83181570 GTGGTCACATCATTGACATCCTTCCTGCTCTGGTCATCATGTGGTCATGTG--ATAGTTCCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242759 60 + 83442489 GTGGTCACATCATTGACATCCTTCCTGCTCTGGTCATCATGTGGTCATGTG--ATAGTTCCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089445 60 + 4267968 GTGGTCACATCATTGACATCCTTCCTGCTCTGGTCATCATGTGGTCATGTG--ATAGTTCCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069801 60 - 2193130 GTGGTCACATCGTTGACATCCTTCCTGCTCTGGTCATCATGTGATCATGTG--ATAGTTCCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133362 60 + 10377808 TCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCCCGTCATGTG--ATAGTTCCT i macNem1.NW_012014910v1 C 0 I 59 s cerAty1.NW_012006043v1 2033918 60 - 8458610 CTCCTCTCATCATCAGCGTCATTCCTGCTCTGACAATCATCTGGTCATGTG--ATAGGTCCT i cerAty1.NW_012006043v1 I 42010 T 45298 s chlSab2.chr16 64973297 60 + 75148670 TCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTG--ATAGTTCCT i chlSab2.chr16 C 0 T 40055 s manLeu1.NW_012106252v1 2235041 60 + 4244037 TCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCCGGTCATGTG--ATAGTTCCT i manLeu1.NW_012106252v1 C 0 I 56 s colAng1.NW_012122154v1 2205495 60 + 4569836 GCAGTCTCATCATCAGCTTGGTTCCTGCTCTGACCATCATCTGGTCGTGTG--ATAGTTCCT i colAng1.NW_012122154v1 C 0 T 9501 s saiBol1.JH378271 1875849 60 + 3513951 GCAGTTTCATCAACAGCCTGCTTCCTGCTCTGACCATCATCTTGTCATGTG--ATAGTTCCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909205 60 + 1920343 CCCGTGCCATCATCAGCATGGTTCCTGCTCTGACCATCTTCTGGTCATGTG--ATAGTTCCT i cebCap1.NW_016107730v1 I 398 T 3522 s otoGar3.GL873537 22854904 60 + 28711273 GTGCTCACATCATCAGCATCGTTCCTGCTCTGGTCACCATCTGCTCATGTG--CTAGTTCCT i otoGar3.GL873537 C 0 I 13 s mm10.chr11 22121753 59 - 122082543 CTGAACATGTCATCAGCAGTA-TCTTGCTTTGGTCATCTCTTGATGGTGCG--ATCACTCTT i mm10.chr11 C 0 C 0 s canFam3.chr9 21480493 62 + 61074082 GTGGTCACATCAGCAGCCTTGTTCTTGCTTCAGGGACCATGGGATCATGTGCTCTAGTTTCT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 471316 58 - 852752 GAGGTCACCTCCTCAGCGTCATTCCTGTTCTG-TCATCATCTG-TCACGTG--ATAGCTCCC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e calJac3.chr5 46145330 277 - 159171411 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=53147.000000 s hg38.chr17_JH159148v1_alt 26842 47 + 88070 ACTGGCCTTGGAAG-GTC------AGGGCAGGTGTCTCTCCCCAG-CT-TGTTCTT s panTro5.chr17 16337941 47 + 83181570 ACTGGCCTTGGAAG-GTC------AGGGCAGGTGTCTCTCCCCAG-CT-TGTTCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242819 47 + 83442489 ACTGGCCTTGGAAG-GTC------AGGGCAGGTGTCTCTCCCCAG-CT-TGTTCTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089505 47 + 4267968 ACTGGCCTTGGAAG-GTC------AGGGCAGGTGTCTCTCCCCAG-CT-TGTTCTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069861 47 - 2193130 ACTGGCCTTGGAAG-GTC------AGGGCAGGTGTCTCTCCCCAG-CT-TGTTCTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1875909 46 + 3513951 GGTGACCAGGGAGG-CTC------AGGA-AGTTCTCTCTGTCCAG-CC-TCATCCT i saiBol1.JH378271 C 0 I 16 s otoGar3.GL873537 22854977 53 + 28711273 TGTGGCTGTGTGCA-GTCCATTAGAAAAAGGATGATAGTAACAAA-AT-AATAAAC i otoGar3.GL873537 I 13 I 1 s mm10.chr11 22121812 47 - 122082543 -TAGAACTAGGAGA-CTC------AGGGTGGTTGCCCCTTTAAAGTTT-TATTCCT i mm10.chr11 C 0 I 16 s canFam3.chr9 21480555 47 + 61074082 GCTGGCCTGAGGAGTGTC------AG--CAGTGGTCCTTCCCCAG-CTCTGGTCTC i canFam3.chr9 C 0 I 9 s dasNov3.JH570468 471374 49 - 852752 GCTGGCCAGGGGAGGGTC------CTAACAGTCGTTGCTCCCCAG-CTTTGTTCCT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e manLeu1.NW_012106252v1 2235101 56 + 4244037 I e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133422 59 + 10377808 I e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=188371.000000 s hg38.chr17_JH159148v1_alt 26889 65 + 88070 ----------------TG-----GGGAGTGTCTGTGGGG----AGGAG------------------------------CATGATGCTGATAGGTTCACAGTGATGAACTGAATCCATGCC s panTro5.chr17 16337988 65 + 83181570 ----------------TG-----GGGAGTGTCTGTGGGG----AGGAG------------------------------CATGATGCTGATAGGTTCACAGTGATGAACTGAATCCATGCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242866 65 + 83442489 ----------------TG-----GGGAGTGTCTGTGGGG----AGGAG------------------------------CATGATGCTGATAGGTTCACAGTGACGAACTGAATCCATGCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089552 65 + 4267968 ----------------TG-----GGGAGTGTCTGTGGGG----AGCAG------------------------------CATGATGCTGATAGGTTCACAGTGATGAATTGAATCCAAGCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069908 65 - 2193130 ----------------CG-----GGGAGTGTCTGTGGGG----AGGAA------------------------------CATGATGCTGATAGGTTCACAGTGATGAACTGAACCCATGCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133481 65 + 10377808 ----------------TG-----GGAAATGTCTGTGGGC----AGTCG------------------------------CGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCC i macNem1.NW_012014910v1 I 59 T 30171 s manLeu1.NW_012106252v1 2235157 65 + 4244037 ----------------TG-----GGAAATGTCTGTGGGC----AGTCG------------------------------CGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCC i manLeu1.NW_012106252v1 I 56 T 62204 s saiBol1.JH378271 1875971 95 + 3513951 ----------------TG-----CAAAGCATCTGTGAGG----AGATACTATTTCGTGAGGGATAATTTTCACAAAGCCATGATGCTGGTATATTCACAGTGATGAATTGAATCCATGCT i saiBol1.JH378271 I 16 I 1 s otoGar3.GL873537 22855031 65 + 28711273 ----------------TG-----GGATGCATTTGTGGGA----AGGAG------------------------------CTTGGTGCTAATATGTTCACAGTGATGAATTGAATGCATGCC i otoGar3.GL873537 I 1 C 0 s mm10.chr11 22121875 54 - 122082543 ----------------TA-----GGAAGAGACTCAGGAG----AGAGG------------------------------CTGGGCGGTGAT-------CAGAGATGACCTGAATGAC---- i mm10.chr11 I 16 C 0 s canFam3.chr9 21480611 74 + 61074082 ----------------TGTAGATGGAAATGTCCCTGGGGGAGTGGGGA------------------------------CATGAGGTCCCTCTGTTCACAGGGAGCACCGGAATCCATGCC i canFam3.chr9 I 9 C 0 s dasNov3.JH570468 471423 81 - 852752 TTGGCTGTACTTAGATTG-----GCAAGTGCACCTGGGG----GCGTG------------------------------CATGATGCTGATATGTTCTCAGGGACAAATTGGATCCCCGCC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=117733.000000 s hg38.chr17_JH159148v1_alt 26954 73 + 88070 TGCGT-CAAGGCTATTCACCTA-CAA-GGCCTGATTCAAGA----AT--AACAGGCACCT------ACCTGTCTTTGTGCAACCTACT s panTro5.chr17 16338053 73 + 83181570 TGCGT-CAAGGCTATTCACCTA-CAA-GGCCTGATTCAAGA----AT--AACAGGCACCT------ACCTGTCTTTGTGCAACCTACT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16242931 73 + 83442489 TGCGT-CAAGGCTATTCACCTA-CAA-GGCCTGATTCAAGA----AT--AACAGGCACCT------ACCTGTCTTTGTGCAACCTACT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089617 73 + 4267968 TGGGT-CAAAGCTATTCACCTA-CAA-GGCCTGATTCAAGA----AT--AACAGGCACCT------ACCTGTCTTTGTGCAACCTACT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2069973 73 - 2193130 TGGGT-CAAGGCTGTTCACCTA-CAG-GGCTTGATTCAAGA----AT--AACAGGCACCC------ACCTGTCTTTGTGCAACCTACT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1876067 70 + 3513951 GGGAC-CAAGACTGTTTACCCACCAA-AGTCTGATTCAATA----CT--AACAGG----T------ATCTCTCTCTGTACAGCTTACT i saiBol1.JH378271 I 1 T 21535 s otoGar3.GL873537 22855096 67 + 28711273 TGGGTCCAAGTCTCTTCACCCA-CAACAGCCCAATTCAAGA----CT--AACAGGAA--------------TCTCTGTACAACCTACT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22121929 71 - 122082543 TAGCT-CA---TTGTTCACTCA-CAGAAGCCTGACTC------------CATAGGCTACTCTGAGCATTTGTCTCTGTGCCAGATCCT i mm10.chr11 C 0 I 4 s canFam3.chr9 21480685 75 + 61074082 TGAGCCCAAGTCAGTCTCCCCA-CAA-AGCCTGATGGGAGACACCCT--GAT-GGCATCT------GCT--TCTTGGAGCACCCTACC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 471504 77 - 852752 TGGGTCCAAGACTGTTCACCCA-CAAAAGCCTGATTCAAGA----CTGCAACAAGAATTT------ATCTTTCTCTTGGCAACTTACT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=3767.000000 s hg38.chr17_JH159148v1_alt 27027 2 + 88070 CC s panTro5.chr17 16338126 2 + 83181570 CC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16243004 2 + 83442489 CC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089690 2 + 4267968 CC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2070046 2 - 2193130 CT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22855163 2 + 28711273 CT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22122004 2 - 122082543 TT i mm10.chr11 I 4 C 0 s canFam3.chr9 21480760 2 + 61074082 CC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 471581 2 - 852752 CC i dasNov3.JH570468 C 0 I 19088 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e saiBol1.JH378271 1876137 21535 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=7496.000000 s hg38.chr17_JH159148v1_alt 27029 6 + 88070 GGATGT s panTro5.chr17 16338128 6 + 83181570 GGATGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16243006 6 + 83442489 GGATGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089692 6 + 4267968 GGATGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2070048 6 - 2193130 GGATGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22855165 6 + 28711273 TCTTGT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22122006 6 - 122082543 GGATGT i mm10.chr11 C 0 I 4010 s canFam3.chr9 21480762 6 + 61074082 ATCTGC i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e saiBol1.JH378271 1876137 21535 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=5006.000000 s hg38.chr17_JH159148v1_alt 27035 4 + 88070 GTat s panTro5.chr17 16338134 4 + 83181570 GTat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16243012 4 + 83442489 GTat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089698 4 + 4267968 GTat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2070054 4 - 2193130 GTCt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22855171 4 + 28711273 GTCT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21480768 4 + 61074082 ATAT i canFam3.chr9 C 0 I 23414 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e saiBol1.JH378271 1876137 21535 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=11025.000000 s hg38.chr17_JH159148v1_alt 27039 12 + 88070 gtggtgtttgtc s panTro5.chr17 16338138 12 + 83181570 gtggtgtttgtc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16243016 12 + 83442489 gtggtgtttgtc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089702 12 + 4267968 gtggtgtttgtc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2070058 12 - 2193130 gtgatgtttgtc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22855175 12 + 28711273 CCTGGTTCTGTC i otoGar3.GL873537 C 0 I 45599 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e saiBol1.JH378271 1876137 21535 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=1094380.000000 s hg38.chr17_JH159148v1_alt 27051 1055 + 88070 tttctgtgcctggcttat----------------------------tttacttaacata-----------------atgatct-------tcaactccatccatg--------------------------------------------------------------------ttgttg-------------------caaatg------------acttgatctcattct--------------tttttatggctgaataatacttcatttggtgtatgtaccacattttctttatccactcatctgttggtggacacttacattgctgctaaatcttagctattgtaaacagtgttgcaacaaatataggagtgcagatgtctctttgatataccaatttctcttcttctgggt-atataccgaggagtgtgattgctggataatatggtagctcagtttttagttttttgaggaacctccaaagtgtcttccatagcgcttgtact----aatttacattcccaccaagaatgcacgagcgttctcttttctccacatctgcatcagcatttgtcattgcctgccttttggatataagccattttaactggggtgagatgatctctcattgtagttttgatttgcatttctctgatgatcaatgatggtgaacaccttttcatatgctt-------atttatatgtcttcttttgagaaatgtcaattcaaatcttttgcccattttgtgatcagattattagattttttttcctatagaattatttgacctccttat--attctggttgttaattcattaacaatgcataggtattttgcaaatattttctcccattctgtgggttgtctctttgtt------attgtttcctttgctgtgcagaagctttttaatttgatgtgatcccatttgtttatttttgctttggttgcctgtgcttgcggggtattgctcaagaaatttttgcccagaccaatgtcctggaga-ttttccccaatattttcttgtagtagtttcatagttcgaggtcttagattcaagtcttcgatctaatttgatttgatttttgtatgtggtgagaaagagggatctagtttcattcctctgcatagagatatctagttttcccagcatggtttattgaagagaatgcctttttcccagtgtatgctcttggcacctttgttgaaaatgaggtgactgtaggtgtgtgg s panTro5.chr17 16338150 1055 + 83181570 tttctgtgcctggcttat----------------------------tttacttaacata-----------------atgatct-------tcaactccatccatg--------------------------------------------------------------------ttgttg-------------------caaatg------------acttgatctcattct--------------tttttatggctgaataatacttcatttggtgtatgtaccacattttctttatccattcatctgttggtggacacttacattgctgctaaatcttagctattgtaaacagtgttgcaacaaatatacgagtgcagatgtctctttgatataccaatttctcttcttctgggt-atataccgaggagtgtgattgctggataatatggtagctcagtttttagttttttgaggaacctccaaagtgtcttccatagcgcttgtact----aatttacattcccaccaagaatgcacaagcgttctcttttctccacatctgcatcagcatttgtcattgcctgccttttggatataagccattttaactggggtgagatgatctctcattgtagttttgatttgcatttctctgatgatcaatgatggtgaacaccttttcatatgctt-------atttatatgtcttcttttgagaaatgtcaattcaaatcttttgcccattttgtgatcagattatttgattttttttcctatggaattatttgacctccttat--attctggttgttaattcattaacaatgcataggtattttgcaaatattttctcccattctgtgggttgtctctttgtt------attgtttcctttgctgtgcagaagctttttaatttgatgtgatcccatttgtttatttttgctttggttgcctgtgcttgcggggtattgctcaagaaatttttgcccagaccaatgtcctggaga-ttttccccaatattttcttgtagtagtttcatagttcgaggtcttagattcaagtcttcgatctaatttgatttgatttttgtatgtggtgagaaagagggatctagtttcattcctctgcatagagatatctagttttcccagcatggtttattgaagagaatgtctttttcccagtgtatgctcttggcacctttgttgaaaatgaggtgactgtaggtgtgtgg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16243028 1055 + 83442489 tttctgtgcctggcttat----------------------------tttacttaacata-----------------atgatct-------tcaactccatccatg--------------------------------------------------------------------ttgttg-------------------caaatg------------acttgatctcattct--------------tttttatggctgaataatacttcatttggtgtatgtaccacattttctttatccattcatctgttggtggacacttacattgctgctaaatcttagctattgtaaacagtgttgcaacaaatatacgagtgcagatgtctctttgatataccaatttctcttcttctgggt-atataccgaggagtgtgattgctggataatatggtagctcagtttttagttttttgaggaacctccaaagtgtcttccatagcgcttgtact----aatttacattcccaccaagaatgcacaagcgttctcttttctccacatctgcatcagcatttgtcattgcctgccttttggatataagccattttaactggggtgagatgatctctcattgtagttttgatttgcatttctctgatgatcaatgatggtgaacaccttttcatatgctt-------atttatatgtcttcttttgagaaatgtcaattcaaatcttttgcccattttgtgatcagattatttgattttttttcctatggaattatttgacctccttat--attctggttgttaattcattaacaatgcataggtattttgcaaatattttctcccattctgtgggttgtctctttgtt------attgtttcctttgctgtgcagaagctttttaatttgatgtgatcccatttgtttatttttgctttggttgcctgtgcttgcggggtattgctcaagaaatttttgcccagaccaatgtcctggaga-ttttccccaatattttcttgtagtagtttcatagttcgaggtcttagattcaagtcttcgatctaatttgatttgatttttgtatgtggtgagaaagagggatctagtttcattcctctgcatagagatatctagtcttcccagcatggtttattgaagagaatgtctttttcccagtgtatgctcttggcacctttgttgaaaatgaggtgactgtaggtgtgtgg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4089714 1055 + 4267968 tttctgtgcctggcttat----------------------------tttacttaacata-----------------atgatct-------tcaactccatccatg--------------------------------------------------------------------ttgttg-------------------caaatg------------acttgatctcattct--------------tttttatggctgaataatacttcatttggtgtatgtaccacattttctttatccatccatctgttggtggacacttacattgctgctaaatcttagctattgtaaacagtgttgcaacaaatataggagtgcagatgtctctttgatataccaatttctcttcttctgggt-atataccgagcagtgtgattgctggataatatggtagctcagtttttagttttttgaggaacctccaaagtgttttccatagcgcttgtact----aatttacattcccaccaagaatgcatgagcgttctcttttctccacatctgcatcagcatttgtcattgcctgccttttggatataagccattttaactggggtgagatgatctctcatcgtagttttgatttgcatttctctgatgatcaatgatggtgaacaccttttcatatgctt-------atttatatgtcttcttttgagaaatgtcaattcaaatcttttgcccattttgtgatcagattattagattttttttcctatagaattatttgacctccttat--attctggttgttaattcattaacaatgcataggtattttgcaaatattttctgccattctgtgggttgtctctttgtt------attatttcgtttgctgtgcagaagctttttaatttgatgtgatcccatttgtttatttttgctttggttgcctgtgcttgcggggtattgctcaagaaatttttgcccagaccaatgtcctggaga-ttttccccaatattttcttgtagtagtttcatagttcgaggtcttagattcaagtcttcgatctaatttgatttgatttttgtatgtggtgagaaagagggatctagtttcattcctctgcatagagatatctagttttcccagcatggtttattgaagagaatgtctttttcccagtgtatgctcttggcacctttgttgaaaatgaggtgactgtaggtgtgtgg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2070070 1053 - 2193130 tttctgtgcctggcttat----------------------------tttacttaacata-----------------atgatct-------tcagctccatccatg--------------------------------------------------------------------ttgttg-------------------cgaatg------------acttgatctcattct--------------tttttatggctgaataatacttcatttggtgtatgtaccatattttctttatccattcatctgttggtggacacttatattgctgctaaatcttagctattgtaaacagtgatgcaacaaatataggagtgcagatgtctctttgatatacggatttcccttcttctgggt-atatactgagcagtgtgattgccggataatatggtagctcagtttttaattttttgaggaacctccaaagtgttttccatagtgcttgtact----aatttacattcccaccaagaatgcacgagccttctcttttctccacatctgcatcagcatttgtcattgcctgccttttggatataagccattttaactggggtgagatgatctctcattgtagttttgatttgcatttctctcatgatcaatgatagtgaacaccttttcatatgctt-------atttatatgtcttcttttgagaaatgtcaattcaaatcttttgcccattttgtgatcagattattatattttttttcctatagaattatttgacctccttat--attctggttgttaattcattaacaatgcgtaggtattttgcaaatattttctcccattctgtgggttatctctttgtt------attgtttcctttgttgtgcagaaactttttaatttgatggcatcccatttgtttattttt-ctttggttgcctgtgcttgtggggtattactcaagaaattttt-cccagaccaatgtcctggaga-ttttccccaatattttcttgtagtagtttcatagttcgaggtcttagattcaagtcttcaatctaatttgatttgatttttgtatgtggtgagaaagagggatcaagtttcattcctctgcatagagatatctagttttcgcagcatggtttattgaagagaatgtctttttcccaatgtaagctcttggcacctttgttgaaaatgtggtgactgtaggtgtgtgg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22900786 1216 + 28711273 TGTATTTGGCTGGCTTACAAAGATGAGAATGTGTGAGTTTCTGTAATACACTTACCATAGATCCAGACAAATCCAGATGAGCTGGTGACACTAGCTCTAACCCTGGGTAGCAACAAAATGAGTTACTTTGAACACTGAATGAGCAGCATAGCCACAGCCATCACTAGGTCTTATTATTGGGGTAGGGCTTATATTTAACAAATGCATAGAAATCCTGCTAGGGCTTATTTTGGGGGTAGGTCTTATTTTCAGGGAAACATGgtattctatagggttcatatgccacatttg-tgtatctactcatgaattagtgggcacttgggatgagtctacatctttgcaattaccagttgtgctgcaataaacatttaagtgctagtgtctttttgataaaattatttcttttcagttgggtcaggtacctagtagtggggttactggatcaaatgttaggtcaacttttagtcctttgaggaaaacccacactattttccatagagcttatatttatgaatttgcagtcccagcaagagtttataagtgtttctttctgtctgtatctactccaatatctattgtt-ttagacgttttaataagaaccttcctagctaggggatggtgatgtctcattgtggttttaatttgcctttccctgatgattagtgatattgagcattttttcatacatttcttgggcatttgtctatattcttttgaaaagcttctgttcatgtctttt----------taatggggttg------tttctttcttgatgatttgcctgagtgctttgtaaattctggatgttagctctttatcag-gtgtag--attttgtgaatgttcttttccattctgcagtttatctgtttgctctgctgattgtttccttttatgtgcagaagc-ttttaattcaattgagtcctatttatttaattttgctgttgctgtaattgcctttttggtcttagtgataaattctttgcctacactaacgtgtaaaagaggtgttcttaacattttcttctagtattcttatggtttcaggtcttacttttaagtcttttattcatctagaattaatttttgtgagtgctaagtgatatggatgctttttccttcttctgcaggttgctatccaattttcccagcaccatttgttgaatacatcttctttcccccagcgtata---ttgtctgttttgtcaaagatcagcttgctctatttggatgg i otoGar3.GL873537 I 45599 T 34606 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e saiBol1.JH378271 1876137 21535 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=2386.000000 s hg38.chr17_JH159148v1_alt 28106 3 + 88070 cga s panTro5.chr17 16339205 3 + 83181570 CGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244083 3 + 83442489 cga i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4090769 3 + 4267968 CGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071123 3 - 2193130 tga i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1876137 21535 + 3513951 T e calJac3.chr5 46145330 277 - 159171411 I e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=1365.000000 s hg38.chr17_JH159148v1_alt 28109 1 + 88070 a s panTro5.chr17 16339208 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244086 1 + 83442489 a i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4090772 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071126 1 - 2193130 a i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46145607 1 - 159171411 A i calJac3.chr5 I 277 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1876137 21535 + 3513951 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=6393.000000 s hg38.chr17_JH159148v1_alt 28110 5 + 88070 cttta s panTro5.chr17 16339209 5 + 83181570 CTTTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244087 5 + 83442489 cttta i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4090773 5 + 4267968 CTTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071127 5 - 2193130 cttta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46145608 5 - 159171411 CTATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854602 5 + 3513951 CTATG i saiBol1.JH378271 T 21535 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28116810 69945 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=5783.000000 s hg38.chr17_JH159148v1_alt 28115 4 + 88070 cttg s panTro5.chr17 16339214 4 + 83181570 cttg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244092 4 + 83442489 cttg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4090778 4 + 4267968 CGTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071132 4 - 2193130 cttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28046865 4 - 80997621 cttt i macFas5.chr16 T 69945 C 0 s calJac3.chr5 46145613 4 - 159171411 cttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854607 4 + 3513951 cttt i saiBol1.JH378271 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019397 281 - 7032639 I e cebCap1.NW_016107730v1 1909265 3522 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e rheMac8.chr16 30133917 3 - 77216781 I a score=704650.000000 s hg38.chr17_JH159148v1_alt 28119 198 + 88070 tcatgcagacaccagttatattgaatcagaggcccattttattccaatgtgaccttaccttaactagttacattctcaatgaccctatttGGTGATGAATTTCTGGGGAAACAAGTCAATCCAAATATTGAAGTATCTCAGAGTGTGTCCATGGCTGATGATAACTGCAAATGAGTAACAGGAATCACAGTGGACAAT s panTro5.chr17 16339218 198 + 83181570 tcatgcagacaccagtcatattgaatcagaggcccattttattccaatgtgaccttaccttaactagttacattctcaatgaccctatttGGTGATGAATTTCTGGGGAAACAAGTCAATCCAAATATTGAAGTATCTCAGAGTGTGTCCATGGCCGATGATAACTGCAAATGAGTAACAGGAATCACAGTGGACAAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244096 198 + 83442489 tcatgcagacaccagtcatattgaatcagaggcccattttattccaatgtgaccttaccttaactagttacattctcaatgaccctatttGGTGATGAATTTCTGGGGAAACAAGTCAATCCAAATATTGAAGTATCTCAGAGTGTGTCCATGGCCGATGATAACTGCAAATGAGTAACAGGAATCACAGTGGACAAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4090782 198 + 4267968 TCATGCAgacaccagtcatgttgaatcagaggcccattttattccagtgtgaccttaccttaactagttacattctcaatgaccctatttGGTGATGAATTTCTGGGGAAACAAGTCAATCCAAATATTGAAGTATCTCGGATTGTGTCCATGGCCGATGATAACTGCAAATGAGTAACAGGAATCACAGTGGACAAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071136 198 - 2193130 tcatgcagacaccagtcacattgaatcagaggcccagtttattccaatgtgactttaccttaactagttacattctcaatgaccctatttGGAGATGAATTTCTGGGGAAACAAATCAATCCAAATATTGAAGTATCTCAGAGTGTGTCCATGGCCGATGATAACCACAAATGAGTAACAGGCATCACAGTGGACAAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28046869 189 - 80997621 tcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgacctta-cttaaccagttacattctcaatgaccttatttGGCTATGAATTTCTGGGGAAGCAAATCAATCCAACTATTGGAGTATCTCAGAGCGC--------CCAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAAT i macFas5.chr16 C 0 C 0 s calJac3.chr5 46145617 196 - 159171411 tcatacagaaaacggtcatattgaatcaga-gcccggtttattccagtgtgacctta-cttaactagttacattctcagtgaccctatttGGTGATGAATTTCTGGGGAAACAAATCAATCCAAATATTGGAGTATCTCAGAGTGTGTCCATACCCAGTGATAACCCCAAATGAGTAACAGCAACCACAGTGGACAAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854611 197 + 3513951 tcatatggacaacagtcatattgaatcagaggccccgtttattccagtgtgacctta-cttaactagttacattctcagtgaccctatttGGTGACAAATTTCTGGGGAAACGAATCAATCCAAATATTGGAGTATCTCAGAGTGTGTCCATACCCAGTGGCAGCCACAAATGAGTAACAGCAACCACAGTGGACAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905743 197 + 1920343 tcatacagacaacagttatattgaatcagaggcccagtttattccagtgtgacctta-cttaactagttacattctcaatgaccctatttGGTGATGAATTTCTGGGGAAACAAATCAATCCAAATATTGGAGTATCTCAGAGTGTGTCCATGCCCAGTGATAACCACAAATGAGTAACAGCAACCACAGTGGACAAT i cebCap1.NW_016107730v1 T 3522 T 367 s aotNan1.NW_018502359v1 7019678 197 - 7032639 tcatacagacaccagtcatattgaatcagaggcccagtttattccagtgtgacctta-cttagctagttacattctcaaccaccctatttGGTGATGAATTTCTGGGGAAACAAATCAATCCAAATATTGGAGTATCTCAGAGTGCGTCCATACCCAGTGATAGTCACAAATGAGTAACAGCAGCCACAGTGGACAAT i aotNan1.NW_018502359v1 I 281 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e rheMac8.chr16 30133917 3 - 77216781 I a score=59516.000000 s hg38.chr17_JH159148v1_alt 28317 24 + 88070 AACACAGTAACTAGAGGGTcagac s panTro5.chr17 16339416 24 + 83181570 AACACAGTAACTAGAGGGTCAGAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244294 24 + 83442489 AACACAGTAactagagggtcagac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4090980 24 + 4267968 AGCACAGTAACTAGAGGGTcagac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071334 24 - 2193130 AGCACAGTAactagagggtcagac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28047058 24 - 80997621 GGTATAGTAACCAGCAGCTCAGAC i macFas5.chr16 C 0 C 0 s calJac3.chr5 46145813 24 - 159171411 GGTATAGTAACCAGAGGCTCAGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854808 24 + 3513951 GGTATAGTCGCCAGAGGCTCGGAC i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7019875 24 - 7032639 GGCATAGTAACCAGAGGCTCAGAC i aotNan1.NW_018502359v1 C 0 T 396 e mm10.chr11 22122012 4010 - 122082543 I e cebCap1.NW_016107730v1 1905940 367 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e rheMac8.chr16 30133917 3 - 77216781 I a score=5571.000000 s hg38.chr17_JH159148v1_alt 28341 3 + 88070 cct s panTro5.chr17 16339440 3 + 83181570 CCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244318 3 + 83442489 cct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091004 3 + 4267968 cct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071358 3 - 2193130 cct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28047082 3 - 80997621 CCT i macFas5.chr16 C 0 C 0 s calJac3.chr5 46145837 3 - 159171411 ACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854832 3 + 3513951 ACT i saiBol1.JH378271 C 0 T 415 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019899 396 - 7032639 T e cebCap1.NW_016107730v1 1905940 367 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e rheMac8.chr16 30133917 3 - 77216781 I a score=3279.000000 s hg38.chr17_JH159148v1_alt 28344 2 + 88070 tc s panTro5.chr17 16339443 2 + 83181570 TC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244321 2 + 83442489 tc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091007 2 + 4267968 tc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071361 2 - 2193130 tc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28047085 2 - 80997621 TC i macFas5.chr16 C 0 T 335 s calJac3.chr5 46145840 2 - 159171411 CC i calJac3.chr5 C 0 T 400 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019899 396 - 7032639 T e cebCap1.NW_016107730v1 1905940 367 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1854835 415 + 3513951 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e rheMac8.chr16 30133917 3 - 77216781 I a score=30473.000000 s hg38.chr17_JH159148v1_alt 28346 35 + 88070 aggcaggaggttctggcttacatcatcaggcaatt s panTro5.chr17 16339445 35 + 83181570 AGGCAGGAGGTTCTGGCTTACATCATCAGGCAATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244323 35 + 83442489 aggcaggaggttctggcttacatcatcaggcaatt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091009 35 + 4267968 aggcaggaggttctggcttactccatcaggcaatt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071363 35 - 2193130 aggcaggaggttctgggttactccatcaggcaatt i nomLeu3.chrUn_GL397460_1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019899 396 - 7032639 T e cebCap1.NW_016107730v1 1905940 367 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1854835 415 + 3513951 T e calJac3.chr5 46145842 400 - 159171411 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28047087 335 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=27771.000000 s hg38.chr17_JH159148v1_alt 28381 28 + 88070 atctagacaacagaagtgctggccagtg s panTro5.chr17 16339480 28 + 83181570 ATCTAGACAACAGAAGTGCTGGCCAGTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244358 28 + 83442489 atctagacaacagaagtgctggccagtg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091044 28 + 4267968 atctagacaacagaagtgctggccagtg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071398 28 - 2193130 atctagacaacagaagtgctggctagtg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1854420 16 + 3513951 ATCTAGACAACAGATC------------ i saiBol1.JH378271 T 415 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7019899 396 - 7032639 T e cebCap1.NW_016107730v1 1905940 367 + 1920343 T e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e calJac3.chr5 46145842 400 - 159171411 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28047087 335 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=2800.000000 s hg38.chr17_JH159148v1_alt 28409 1 + 88070 g s panTro5.chr17 16339508 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244386 1 + 83442489 g i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091072 1 + 4267968 g i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071426 1 - 2193130 g i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1854436 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905573 1 + 1920343 G i cebCap1.NW_016107730v1 T 367 C 0 s aotNan1.NW_018502359v1 7019503 1 - 7032639 G i aotNan1.NW_018502359v1 T 396 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e calJac3.chr5 46145842 400 - 159171411 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28047087 335 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=152426.000000 s hg38.chr17_JH159148v1_alt 28410 57 + 88070 tgaagggagtatagaacttgtggtaactaatg-gagatgatgaatctcagGTGAACCC s panTro5.chr17 16339509 57 + 83181570 TGAAGGGAGTATAGAACTTGTGGTAACTAATG-GAGTTGATGAATCTCAGGTGAACCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244387 57 + 83442489 tgaagggagtatagaacttgtggtaactaatg-gagttgatgaatctcagGTGAACCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091073 57 + 4267968 cgaagggagcatagaacttgtggtaactaatg-gagatgatgaatctcagGTGAACCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071427 57 - 2193130 tgaagggagtatagaaCTTGTGGTAACTAATG-GAGAAGATGAATGTGAGGTGAACCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46145442 58 - 159171411 TGAAGGGAGTTTAGAGCCTTGTGTAACTAATGAAGAATTATGAATCTCAGGTGCACCC i calJac3.chr5 T 400 C 0 s saiBol1.JH378271 1854437 57 + 3513951 TGAAGGGAGTATAGAACTTGTGGTAATGAATG-GGGATTATGAATCTCAGGGGAACCC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905574 57 + 1920343 TGAAGGGAGTATAGAACTTGTGGTAACTAATG-GAGATTATGACTCTCAGGTGAACTC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019504 57 - 7032639 TGAAGGGAGTGTAGAACTTGTGGTAACTAATG-GAGATTACAAATCTCAGGTGAACCC i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e macFas5.chr16 28047087 335 - 80997621 T e rheMac8.chr16 30133917 3 - 77216781 I a score=11187.000000 s hg38.chr17_JH159148v1_alt 28467 3 + 88070 TAT s panTro5.chr17 16339566 3 + 83181570 TAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244444 3 + 83442489 TAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091130 3 + 4267968 TAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071484 3 - 2193130 TAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28046752 3 - 80997621 TAC i macFas5.chr16 T 335 C 0 s calJac3.chr5 46145500 3 - 159171411 TAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854494 3 + 3513951 TAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905631 3 + 1920343 TAT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019561 3 - 7032639 TAT i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e colAng1.NW_012122154v1 2205555 9501 + 4569836 T e chlSab2.chr16 64973357 40055 + 75148670 T e cerAty1.NW_012006043v1 2033978 45298 - 8458610 T e macNem1.NW_012014910v1 2133546 30171 + 10377808 T e rheMac8.chr16 30133917 3 - 77216781 I a score=43592.000000 s hg38.chr17_JH159148v1_alt 28470 6 + 88070 TACAGT s panTro5.chr17 16339569 6 + 83181570 TACAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244447 6 + 83442489 TACAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091133 6 + 4267968 TACGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071487 6 - 2193130 TACAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30133920 6 - 77216781 TACAGC i rheMac8.chr16 I 3 C 0 s macFas5.chr16 28046755 6 - 80997621 TACAGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2103375 6 + 10377808 TACAGC i macNem1.NW_012014910v1 T 30171 C 0 s cerAty1.NW_012006043v1 1988680 6 - 8458610 TACAGC i cerAty1.NW_012006043v1 T 45298 C 0 s chlSab2.chr16 64933302 6 + 75148670 TACAGC i chlSab2.chr16 T 40055 C 0 s colAng1.NW_012122154v1 2196054 6 + 4569836 TACAGT i colAng1.NW_012122154v1 T 9501 C 0 s calJac3.chr5 46145503 6 - 159171411 TAGAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854497 6 + 3513951 TATAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905634 6 + 1920343 TATAGT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019564 6 - 7032639 TATAGT i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21480772 23414 + 61074082 I e manLeu1.NW_012106252v1 2235222 62204 + 4244037 T e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T a score=3156786.000000 s hg38.chr17_JH159148v1_alt 28476 330 + 88070 AGTAACTGTATCTTGTTCCATTTGGCCTTTATTTTATATCTCtccttcccttcttccttcctgccttcctttcctcttaccttcccttccttcTATTCTACCATccttttcatacagacaccagtcatattgaataagaagaccagtttattccaatgtgaccttacttaactagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAAAAAATCAATCCAAATATGGAAGTATCTCAGAGCGTGTCCATGCCTAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAACGGTATAGTAACTAGCAGCTCAGA-A s panTro5.chr17 16339575 329 + 83181570 AGTAACTGTATCTTGTTCCATTTGGCC-TTATTTTATATCTCtccttcccttcttccttcctgcctttctttcctcttaccctcccttccttcTATTCTACCATccttttcatacagacaccagtcatattgaataagaagaccagtttattccaatgtgaccttacttaactagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAAAAAATCAATCCAAATATGGAAGTATCTCGGAGCGTGTCCATGCCTAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAACGGTATAGTAACTAGCAGCTCAGA-A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244453 331 + 83442489 AGTAACTGTATCTTGTTCCATTTGGCCTTTATTTTATATCTCtccttcccttcttccttcctgccttcctttcctcttaccctcccttccttcTATTCTACCATccttttcatacagacaccagtcatattgaataagaagaccagtttattccaatgtgaccttacttaactagttacattctcaatgaccttatttGGCTATGAATTTCTGGGGAAAAAAAATCAATCCAAATATGGAAGTATCTCGGAGCGTGTCCATGCCTAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAACGGTATAGTAACTAGCAGCTCAGA-A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091139 330 + 4267968 AGTAACTGTATCTTGTTCCATTTGGCCTTTATTTTATATCTCtccttcccttcttccttcctgccttcctttcctcttaccctcccttccttcTATTCTACCATccttttcatacagacaccagtcatattgaataagaagaccagtttattccaatgtgaccttacttaactagttacattctcaatgaccttatttGGCTATGAATTTCTGAGG-AAAAAAATCAATCCAAATATGGAAGTATCTCAGAGCGTGTCCATGCCTAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAACGGTATAGTAACTAGCAGCTCAGA-A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071493 330 - 2193130 AGTAACTGTATCTTGTTCCATTTGGCTTTTATTTTATATCTCtccttcccttctttcttccttccttccttccctcttaccctccctcacttccattctaccAAccttttcatacagacaccagtcatattgaataagaggaccagtttattccaatgtgaccttatttaactagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-GAAAAAATCAATCCAAATATGGAAGTATCTCAGAGCGTGTCCATGCCTAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAACGGTATAGTAACTAGCAGCTCAGA-A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30133926 329 - 77216781 AGTAACTGTATCTTGTTTTATTTGGCCTTTATTTTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctcccttccattctaccATccttttcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgaccttacttaaccagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAActattggagtatctcagagcgcatccatgcccagtgataaccacaaatgagtaacagcaatcacagtggacaatggtatagtaaccagcagctcaga-c i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28046761 321 - 80997621 AGTAACTGTATCTTGTTTTATTTGGCCTTTATTTTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctcccttccattctaccATccttttcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgaccttacttaaccagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAACTATTGGAGTATCTCAGAGC--------GCCCAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGACAATGGTATAGTAACCAGCAGCTCAGA-C i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2103381 329 + 10377808 AGTAACTGTATCTTGTTTTATTTGGCCTTTATTTTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctcccttccattcTACCATccttttcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgaccttacttaaccagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAActattggagtatctcagagcgcatccatgcccagtgataaccacaaatgagtaacagcaatcacagtggacaatggtatagtaaccagcagctcaga-c i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1988686 329 - 8458610 AGTAACTGTATCTTGTTTTATTTGGCCTTTATTCTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctctcttccattctaccATccttttcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgaccttacttaaccagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAActattggagtatctcagagcacgtccatgcccagtgataaccacaaatgagtaacagcaatcacagtggacaatggtatagtaaccagcagctcaga-c i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933308 329 + 75148670 AGTAACTGTATCTTGTTTTATTTGGCCTTTATTTTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctcccttccattcTACCATGcttttcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgaccttacttaaccagttacattctcaatgaccttatttGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAActattggagtatctcagagcgcgtccatgcccagtgataaccacaaatgagtaacagcaatcacagtggacaatggtatagtaaccagcagctcaga-c i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173018 323 + 4244037 AGTAACTGTATCTTGTTTTATTTGGCCTTTATTTTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctcccttccattcTACCATccttttcatacagacaccagtcatattgaataagaggacccgtttattccaatgtgaccttactta-------acattctcagtgaccttatttGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAACTATTGGAGTATCTCAGAGCGCATCCATGCCCAGTGATAACCACAAATGAGTAACAGCAATCACAGTGGATAATGGTATAGTAACCAGCAGCTCAGACC i manLeu1.NW_012106252v1 T 62204 C 0 s colAng1.NW_012122154v1 2196060 329 + 4569836 AGTAACTGTATCTTGTTTCATTTGGCCTTTATTTTATAtc-ctccttcccttctttcttcctgccttcctttcctcttaccttccctcccttccattcTACCATccttttcatacagacaccagtcatattgaataagaggacccatttattctagtgtgaccttacttaaccagttacattctcaatgaccttattGGGCTATGAATTTCTGGGG-AAGCAAATCAATCCAACTATTGGAGTATCTCAGAGTGTGTCCATGCCCAGTGATAACCACAAATGAGTAACAGCAATCACAGTGTACAATGGTACAGTAACTAGCAGCTCAGA-C i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46145509 328 - 159171411 AGTAACTGTATCTTATTCCA-TTGGCTTTTATTTTCTCTCTCtctttcccttctttcttcctgccttcctttcctctttccctccttccCTGTCACTCTACTATGcttttcatacagaaaacggtcatattgaatcaga-gcccggtttattccagtgtgaccttacttaactagttacattctcagtgaccctatttGGTGATGAATTTCTGGGG-AAACAAATCAATCCAAATATTGGAGTATCTCAGAGTGTGTCCATACCCAGTGATAACCCCAAATGAGTAACAGCAACCACAGTGGACAATGGTATAGTAACCAGAGGCTCAGA-C i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854503 329 + 3513951 AGTAACTGTATCTTATTCCA-TTGGCTTTTATTTTATATCTCtctttcccttctttcttcctgacttcctttcctctttccctccttccCTTCCACTCTGCTATGcttttcatatggacaacagtcatattgaatcagaggccccgtttattccagtgtgaccttacttaactagttacattctcagtgaccctatttGGTGACAAATTTCTGGGG-AAACGAATCAATCCAAATATTGGAGTATCTCAGAGTGTGTCCATACCCAGTGGCAGCCACAAATGAGTAACAGCAACCACAGTGGACAGTGGTATAGTCGCCAGAGGCTCGGA-C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905640 324 + 1920343 ATTAACTGTATCTTATTCCA-TTGGCTTTTATTTTATATCTCTCTTTCCCTTCTTTCTTCCTGACTTCCTTTCCTCTTTCCCTCCTTC-----CACTCTGCTATGcttttcatacagacaacagttatattgaatcagaggcccagtttattccagtgtgaccttacttaactagttacattctcaatgaccctatttGGTGATGAATTTCTGGGG-AAACAAATCAATCCAAATATTGGAGTATCTCAGAGTGTGTCCATGCCCAGTGATAACCACAAATGAGTAACAGCAACCACAGTGGACAATGGTATAGTAACCAGAGGCCCAGA-C i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019570 329 - 7032639 AGTAACTGTATCATTTTCCA-TTGGCTTTAATtttatatctctctttcccttctttcttcctgccttcctttcctctttccctccttcccttccACTCTGCTATGcttttcatacagacaccagtcatattgaatcagaggcccagtttattccagtgtgaccttacttagctagttacattctcaaccaccctatttGGTGATGAATTTCTGGGG-AAACAAATCAATCCAAATATTGGAGTATCTCAGAGTGCGTCCATACCCAGTGATAGTCACAAATGAGTAACAGCAGCCACAGTGGACAATGGCATAGTAACCAGAGGCTCAGA-C i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21480772 23414 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T a score=6279985.000000 s hg38.chr17_JH159148v1_alt 28806 629 + 88070 CCTTCTGTCcctcttctttctc----tcctcctctacctccttctcctAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCGAATGACAGACCATAGATGACA-TTTTCATtatcctgtccatatttctcagatcttagtgtgcttgggccagtttctatttgccag--aatctgcatctctgtgcctaag----ggctcttgtattgcaactgcagaaagtcatgtcacct--gtgcattccacacagaggactatcactcaactcaaccaatgatcttggagagctgatttacaaagactctagctc---ccttattcctgaagatagagattgctaa--------------tttatgtgtttttca-----tcatttctgatagttttccctttggtttaaattttagttggtcactgtgatacttactggctcaatagtatacccttttctgtatctcttctctg-atccctaatggtgtgatctgcacttcc-----caataaactactttcactggaatatttttc-taagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagcctcaatttcctcatctctacaatggtaacattaatacctactttgaacatttcctcaagaat s panTro5.chr17 16339904 629 + 83181570 CCTTCTGTCCCTCTTCTTTCTC----TCCTCTTCTACCTCCTTCTCCTAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCGAATGACAGACCATAGATGACA-TTTTCATTATcctgtccatatttctcagatcttagtgtgcttgggtcagtttctatttgccag--aatctgcatctctgtgcctaag----ggctcttgtattgcaactgcagaaagtcatgtcacct--gtgcattccacacagaggaatatcactcaactcaaccaatgatcctggagagctgatttacaaagactctagctc---ccttattcctgaagatggagattgctaa--------------tttatgtgtttttca-----tcatttctgatagttttccctttggtttaaattttagttggtcactgtgatacttgctggctcaatagtatacccttttctgtatctcttctctg-atccctaatggtgtgatctgcacttcc-----caataaactactttcactggaatatttttc-taagtatctgttctgggagaaaccacactatgacaTTACAttaacgctctcagcctcaatttcctcatctctacaatggtaacattaatacctactttgaacatttcctcaagaat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16244784 629 + 83442489 CCTTCTGTCCCTCTTCTTTCTC----TCCTCTTCTACCTCCTTCTCCTAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCGAATGACAGACCATAGATGACA-TTTTCATtatcctgtccatatttctcagatcttagtgtgcttgggccagtttctatttgccag--aatctgcatctctgtgcctaag----ggctcttgtattgcaactgcagaaagtcatgtcacct--gtgcattccacacagaggaatatcactcaactcaaccaatgatcctggagagctgatttacaaagactctagctc---ccttattcctgaagatggagattgctaa--------------tttaagtgtttttca-----tcatttctgatagttttccctttggtttaaattttagttggtcactgtgatacttactggctcaatagtatacccttttctgtatctcttctctg-atccctaatggtgtgatctgcacttcc-----caataaactactttcactggaatatttttc-taagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagcctcaatttcctcatctctacaatggtaacattaatacctactttgaacatttcctcaagaat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4091469 629 + 4267968 CCTTCTGTCcctcttctttctc----tcctcccctacctccttctcctAGAATTT--------CTGGCTGTCCATCATAGTTAAGAAGTAAAGATTGGATCTGAGTGGAGCGAATGACAGATCAGAGATGACA-TTTTCATtatcctgtccatatttctcagatcttagtgtgcttgggccagtttctatttgccag--aatctgcatctctgtgcctaag----ggctcttgtattgcaactgcagaaagtcatgtcacct--gtgcattccacacagaggactatcactcaactcaaccaatgatcctggagagctgatttacaaagactctagctc---ccttattcctgaagatggagattgctaa--------------tttatgtgtttttca-----tcatttctgatagttttccctttggtttaaattttagttggtcactgtgatacttactggctcaatagtatacccttttctgtatctcttctctg-atccctaatggtgtgatctgcacttcc-----caataaactactttcactggaatatttttc-taagtatctgttctgggagaaactacactatgacaTTACAttaactctctcagccttgctttcctcatctctacaatggtaacattaatacctactttgaacatttcctcaagaat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2071823 628 - 2193130 CCTTCTGTCcctcttctttccc----tcctcctcttcttccttctcctAGAATTT--------CT-GCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCGAATGGCAGATCATAGATAata-ttttcattatcctgtccatatttctcagatcttagtgtgcttgggccagtttctatttggcag--aatctgcatctctgtgcctaag----gtctcttgtattgcaactgcagaaagtcatgtcacct--gtgcattccacacagaggaatatcactcaactcaaccaatgattctggagaactgatttacaaagactctagctc---ccttattcctgaagatggaaattgctaa--------------tttgtgtgtttttca-----tcatttctgatagttttccctttggtttcaactttagttggtcgctgtgatacttactggctcaatagtgtacccttttctgtaactcttccctg-atccctaatggtgtgatctgcacttcc-----caataaactactttcactggaatatttttc-tcagtgtctgttctgggagaaaccacactatgataTTACAttaactctctcagactcaatttcctcatccctacaatggtaacattaatacctactttgaacatttcctcgagaat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30134255 628 - 77216781 ccttcTGTCTctcttctttctc----tcctcctctccctccttctcctAGAATTT--------CTGGCTGTCCATCATAGTTAAGAAGCAAAGATTGGATCTCAGTGGAGCAAATGACAGATCATAGATAACA-TTTTCATTATCCTGTCCATATTTCTCGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTGCCAG--AATCTGTATCTCTGTGCCTAAG----GGCTCTTGTATTGCAATTGCAGAAAGCCATGTCACCT--GTGCATTCCACACAAAGGAATATCACTCAActcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctaa--------------tttatgtgttttcca-----tcatttctgatagttttccctttggtttaagctttagttggtcactgtgatacttactggctcaatagtgtgcccttttctgtatcacttccctg-atccctaatggtgtgatctgcacttcc-----caataaaacactttcactggaatatttttc-tcagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagtctcaattccttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28047082 628 - 80997621 CCTTCTGTCTctcttctttctc----tcctcctctccctccttctcctAGAATTT--------CTGGCTGTCCATCATAGTTAAGAAGCAAAGATTGGATCTCAGTGGAGCGAATGACAGATCATAGATAACA-TTTTCATTATCCTGTCCATATTTCTCGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTGCCAG--AATCTGTATCTCTGTGCCTAAG----GGCTCTTGTATTGCAATTGCAGAAAGCCATGTCACCT--GTGCATTCCACACAAAGGAATATCACTCAActcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctaa--------------tttatgtgttttcca-----tcatttctgatagttttccctttggtttaagctttagttggtcactgtgatacttactggctcaatagtgtgcccttttctgtatcacttccctg-atccctaatggtgtgatctgcacttcc-----caataaaacactttcactggaatatttttc-tcagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagtctcaattccttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2103710 628 + 10377808 ccttcTGTCTctcttctttctc----tcctcctctccctccttctcctAGAATTT--------CTGGCTGTCCATCATAGTTAAGAAGCAAAGATTGGATCTCAGTGGAGCGAATGACAGATCATAGATAACA-TTTTCATTATCCTGTCCATATTTCTCGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTGCCAG--AATCTGTATCTCTGTGCCTAAG----GGCTCTTGTATTGCAATTGCAGAAAGCCATGTCACCT--GTGCATTCCACACAAAGGAATATCACTCAActcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctaa--------------tttatgtgttttcca-----tcatttctgatagctttccctttggtttaagctttagttggtcactgtgatacttactggctcaatagtgtgcccttttctgtatcacttccctg-atccctaatggtgtgatctgcacttcc-----caataaaacactttcactggaatatttttc-tcagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagtctcaattccttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989015 628 - 8458610 ccttcTGTCTctcttctttctc----tcctcctctccctccttctcctAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTCAGTGGAGCGAATGACAGATCATAGATAACA-TTTTCATTATCCTGTCCATATTTCTCGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTGCCAG--AATCTGTATCTCTGTGCCTAAG----GGCTCTTGTATTGCAATTACAGAAAGCCATGTCACCT--GTGCATTCCACACAGAGGCATATCACTCAActcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctaa--------------tttatgtgttttcca-----tcatttctgatagttttccctttggtttaagctttagttggtcactgtgatacttactggctcaatagtgtacccttttctgtatcacttccctg-atccctaatggtgtgatctgcacttcc-----caataaaatactttcactggaatatttttc-tcagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagtctcaattccttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933637 628 + 75148670 ccttcTGTCTCTCTTCTTTCTC----TCCTCCTCTCCTTCCTTCTCCTAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCGAATGACAGATCATAGATGACA-TTTTCATtatcctgtccatatttctcggatcttagtgtgcttgagtcagtttccatttgccag--aatctgtatctctgtgcctaag----ggctcttgtattgcaattgcagaaagccatgtcaccc--gtgcattccacatagaggaatatcactcaactcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctaa--------------tttatgtgttttcca-----tcatttctgatagttttccctttggcttaagctttagttggtcactgtgatacttactggctcaatagtgtacccttttctgtatcacttccctg-atccctaatggtgtgatctgcatttcc-----cgataaaatactttcactggaatatttttc-tcagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagtctcaattccttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173341 628 + 4244037 CCTTCTGTCTCTCTTCTTTCTC----TCCTCCTCTCCCTTCTTCTCCTAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCGAATGACAGATCATAGATAACA-TTTTCATTATCCTGTCCATATTTCTCAGATCTTAGTGTGCTTGAGTCAGTTTCCATTTGCCAG--AATCTGTATCTCTGTGCCTAAG----GGCTCTTGTATTGCAATTACAGAAAGCCATGTCACCT--GTGCATTCCACACAGAGGAATATCACTCAActcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctaa--------------tttatgtgttttcca-----tcatttctgatagttttccctttggtttaagctttagttggtcactgtgatacttactggctcaatagtgtacccttttctgtatcacttccctG-ATCCTTAATGGTGTGATCTGCACTTTC-----CAATAAAATACTTTCACTGGAATATTTTTC-TCAGTATCTGTTCTGGGAGAAACCACACTATGACATTACAttaactctctcagtctcaattccttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196389 627 + 4569836 ccttctgtctctcttctttctc----tcctcctctccctccttctcctAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTGGATCTGAGTGGAGCAAATGACAGATCATAGATAACA-TTTTCATTATCCTGTCCATATTTCTTGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTGCCAG--AATCTGTATCTCTGTGCCTAAG----GGCTCTTGTATTGCAACTGCAG-AAGCCATGTCACCT--GTGCATTCCACACAGAGGAATATCACTCAActcaaccaatgattctggagagctgatttac-aagactctagctc---tcgtattcctgaagatggagattgctac--------------tttatgtgtttttca-----tcacttctgatagttttccctttggtttaagctttagttggtcactgtgatacttactggctcaatagtgtaccctcttctgtatcacttccctg-atccctaatggtgtgatctgcacttcc-----caataaaatactttcactggaatatttttc-tcagtatctgttctgggagaaaccacactatgacaTTACAttaactctctcagtctcaatttcttcatctctacaatggtaacactaatacctactttgaacatttcctagagaat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46145837 620 - 159171411 ACTCCTGTCCTTCTTCTTCCTC----TCTTCCTCTCCTTCCTTCTCCTAGAATTT--------CTGGCTGTCCATCGCAGTTAAGAAGCAAAGATTAAATCTGAGTGGAGCAAACGGCAGATCATAGAGAACATTTTTCATTATCCTGCCGACATATCTTGGattttactgtgcttgggccattttctatctggcag--aatctgcatctctgtgcgtaag----tactcttacattgcagctggagagagtcatgtcacct--gtgcatgccatacagaggaatatcact---------caatgattcctgagagcttatttacaaagactctagctc---ccttatttctgaagttggagaatgctga--------------tatacgtaacttttaaaaagtcatttctgatagttttccttttggtttaagctttagttggtcactgcggtgcttactggctcaatagtgtacccttttctgtatcacttccctg-atccctaccagtgtgatctgcacttcc-----cagcaaactactttcactagaatg---ttc-tcagtgtctgttctgggagaaaccacactatgacattacattatctctctcagcctcaatttcctcatctctaaaatggtaac---aatatctactgtgcacatttctttgagaat i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1854832 628 + 3513951 ACTGCTGTCCTTCTTCTTCCTC----TCCTC--CTCCCTCCTTCTCCTAGAATTT--------CTGGCTGTCCGTCACAGTTAAGAAGCAAAGATTAAATCTGAGTGGAGCAAACGGCAGGTCATAGAGAATGTTTTTCATtatcccgccggtatgtctcggattttactgtgcttgggccattttctatctgccag--aatctgcatctctgtgcataag----ggctcttatattgcagctggagaaagtcatgtcacat--gtgcatgccacacagaggaatatcact-----caaccaatgattcctgagagcttatttacaaagactctagctc---ccttattcttgaagttggagcatgctga--------------tatatgtaattttaaaaaaatcatttctgagagttttccttttggtttaaactttagctggtcactgtgatacttattggctcgatagtgtaccctttcctgtatcacttccctg-atccctactggtgtgatctgtacttcc-----cagtaaactactttcactagaatgttcttc-tcagtgtctcttctgggagaaaccacactatgacattacattatctctctcagcctcaatttcctcatttctaaaatggtaacattaacatctactgtgcacatttctttaagaat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905964 628 + 1920343 ACtcctctccttcttcttcctc----tcttcctctccctcattctcCTAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTAAATCTGAGTGGAGCAAACGGCAGGTCATAGAGAACGTTTTTCATtatcccgccgatatatcttggattttactgtgcttgggccattttctacctgctag--aatctgcatctctgtgcataag----ggctcttatattgcagctggagaaagtcatgtcaccg--gtgcatgccacacagaggagtatcact-----caaccaatgattcctgagagcttatttacaaagactctagctc---ccttattcctgaagttggaaaatgctga--------------tatatgtaatttttaaaa--tcatttctgagagttttccttttggtttaagctttagttggtcactgcgatacctactggctcaatagtgtacccttttctgtatcacttccctg-atccctactggtgtgatctacacttcc-----cagtaaactactttcactagaatgttcttc-tcagtgcctgttctgggagaaaccacactatgacattacattatctctctcagcctcaatttcctcatctctgaaatggtaacattaatatctactgtgcacatttctttgagaat i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019899 626 - 7032639 ACTCCTGTCCTTCTTCTTCCTC----TCTTCCTCTCCCTC---CTCCTAGAATTT--------CTGGCTGTCCATCACAGTTAAGAAGCAAAGATTAAAGCCGAGTGGAGCAAACGGCAGATCATAGAGAACGTTTTTCATTATCCTGCCAATGTATCTTGGattttactgtgcttgggccattttctatctggcag--aatctgcatctctgtgcataag----ggctcttatattgcagctggagaaagtcatgtcacct--gtgaatgccacacagaggaatatcact-----caaccaatgattcctgaaagcttatttacaaagactctagctc---ccttactcctgaagttggagaatgctga--------------catatgtaattttaaaaaa-tcatttctgatagttttccttttggtttaagctttagttggtcactgcaatacttactggctcaatagtgtacccttttctgtatcacttacctg-atccctactggtgtgatctgcacttcc-----cagtaaactactttcactacaatgttcttc-tcagtgtctgttctgggagaaaccacattatgacattacattatctctctcagcctcaatttcctcatctctaaaatggtaacattaatatctactgtgcaaatttctttgagaat i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 21504186 640 + 61074082 ccttctcctcctcttttccctcgtctttctcctctgtcttcctTTAACACAAATTGTGCCCGCCTGCCTGCCTGCCATCGTGAAGGAGAAAATGTGGGGTCTGAGTGGAGAAAATCGTGGACTGTAGATGATG-CCTTACACACGCCAGCCATAGAACTCAGATCTTCCTGTGTTCAGGACAATTTCTATGCAGCAGCAGATCCGCATCTCTATGCCTCGGGGCTGGCTGTTTTCATGCAACAGCAGGATGTCATGTTGCCTGGGTGTGTGCCGCACTGACAGAAAC------GCTCAACCAATGCTTCTGGAGAGTTGGTTTAT-GTGACTACAGGGCTGTCCTTGCTCCTGAAATAGGAGAATCCTGACATGGCtctttctttctttcttttttttt-----ttttttctGATATATTTC--TCAGGATTGAGC--CAGTTGAAAACTGTGACgctggc---------------ctccatcctgtatcacttccccaccttccaaccagtgggatctgccctccctcccgcaagaaaccacat--gcctgaatgctgttcttcagagtagcttctgggaaaaaccaaactctgacaTTAC-----CTATCTCTGTCCTGATTTCCTCACTTCTACCATGGGAACCTTAGGATGTACTTTAAGAATTCCTTCAAGGAT i canFam3.chr9 I 23414 I 15840 e mm10.chr11 22122012 4010 - 122082543 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T a score=1933540.000000 s hg38.chr17_JH159148v1_alt 29435 213 + 88070 aaatattaatgaacataaagcatgtagtcactatctatcaaatagtaggcaacctagaacatattagttctttttttGTCCAGAAAACTTAAAAAATAATTTTAATATTGAATATAAGAATATATTTAAAATAACTAACTAGATCAACTAAATTCTTTCtttactagttttattgaggtataattaacaaataaaaattgtgtatatgtaagg s panTro5.chr17 16340533 213 + 83181570 aaatattaatgaacataaagcatgtagtcactatctatcaaacagtgggcaacctagaacatattagttctttttttGTCCAGAAAACTTAAAAAATAATTTTAATATTGAATATAAGAATATATTTATAATAACTAACTAGATCAACTAAATTCTTCCtttactagttttattgaggtataattaacaaataaaaattgtgtatatgtaagg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16245413 213 + 83442489 aaatattaatgaacataaagcatgtagtcactatctatcaaacagtgggcaacctagaacatattagttctttttttGTCCAGAAAACTTAAAAAATAATTTTAATATTGAATATAAGAATATATTTATAATAACTAACTAGATCAACTAAATTCTTTCtttactagttttattgaggtataattaacaaataaaaattgtgtatatgtaagg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092098 211 + 4267968 aaatattaatgaacataaagcatgtagtcactatctatcaaatagtaggcaacttagaacatattagttctttttttGTCCAGAAAACTTAAAAAATAATTTTAATATT--ATATAAGAATATATTTATAATAACTAACTAGATCAACTAAATTCTTTCtttactagttttgttgaggtataattaacaaataaaaattgtgtatatgtaagg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2072451 209 - 2193130 aaatattaatgaacataaagcatctagtcactatctatcaaatagtaggcaacctagaacatattagttctttttttGTCCAGAAAACTCAAAAAATAATTTTAATATTGAATATAAGAATATATTTATAATAACTAACTAGATCAACTAAATTCTTTCtttattagttttattgaggtacaatt----aataaaaattgtgtatatgtaagg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30134883 206 - 77216781 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAAACTTAAAAAATAATTTTAATATTGAATACAAGAATATATTTATAATAACTAACTAGATCAACTAAA----TTCtttactagctttattgaggtataattaacaaataaaaattatgtatatttaagg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28047710 206 - 80997621 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAAACTTAAAAAATAATTTTAATATTGAATACAAGAATATATTTATAATAACTAACTAGATCAACTAAA----TTCtttactagctttattgaggtataattaacaaataaaaattatgtatatttaagg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104338 206 + 10377808 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAAACTTAAAAAATAATTTTAATATTGAATACAAGAATATATTTATAATAACTAACTAGATCAACTAAA----TTCtttactagctttattgaggtataattaacaaataaaaattatgtatatttaagg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989643 210 - 8458610 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAAACTTAAAAAATAATTTTAATATTGAGTACAAGAATATATTTATAATAACTAACTAGATCAACTAAATTCTTTCtttactagctttattggggtataattaacaaataaaaattgtgtatatttaagg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934265 210 + 75148670 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAAACCTAAAAAATAATGTTAGTATTGAATATAAAAATATATTTATAATAACTAACTAGATCAACTAAATTCTTTCtttactagctttattgaggtataattaacaaataaaaattgtgtatatttaagg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173969 210 + 4244037 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAAACTTAAAAAATAATTTTAATATTGAATACAAGAATATATTTATAATAACTAACTAGATCAACTAAATTCTTTCtttactagctttattgaggtataattaacaaataaaaattgtgtatatttaagg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197016 206 + 4569836 aaatattagtgaacataaagcatttagtcactacctatcaagtagtaggcaacctggaacatattagttc---ttttgttCAGAAGACTTAAAAAATAATTTTAATATTGAATACAAGAATATATTTATAATAACTAA----ATCAACTAAATTCTTTCtttactagctttattgagatataattaacaaataaaaattgtgtatatttaagg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46146457 210 - 159171411 aaatatcaatgaacataaaacatttagtaactatctatcaaatggtaggcaacctagaacatgttagctctttttttGTTCAGAAAACTTTAAAAATGATTTTAATATTGAAGATAAGAATA---TATTTGTAACTAACTAGATCAACTAAATTCTTTCtttactagctttattgaaatataattaacaaataaaatttgtgtatatttaaga i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1855460 207 + 3513951 aaatatgaatgaacataaaacatttagtcactatctatcaaatggtaggcaacctagaacatgttagctcttttTTCGTTCAGAAAACTTTAAAAATGATTATAATATTGAAGATAAGAATA---TTATAATAACTAACTAGATCAACTAAATTCt---tttactagttttattgagatataattaacaaatgaaatttgtgtatatttaaga i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1906592 209 + 1920343 aaagatgaatgaacataaaacatttagtaactatctatcaaatggtaggcaacccagaacatg-tggctctttttttGTTCTGAAAACTTTAAAAATGATTTTAATATTGAAGATAAGAATA---TTATAATAACTAACTAGATCAACTAAATTCTTTCtttgctagttttattgagatataattaacaaataaaatttgtgtatatttaaga i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020525 208 - 7032639 aaatatgaatgaacataaaacattaattca-tatctatcaaatggtaggcaacctagaacatgttagctctttttttGTTCAGAAAACTTTAAAAATGATTTTAATATTGAAGATAAGAATATATTTATAATAACTAACTAGATCAACTAAATTC----tttactagctttattgagatataattaacaaataaaatttgtgtatatttaaga i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21504826 15840 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T a score=62546.000000 s hg38.chr17_JH159148v1_alt 29648 11 + 88070 tataaaaggtt s panTro5.chr17 16340746 11 + 83181570 tataaaaggtt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16245626 11 + 83442489 tataaaaggtt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092309 11 + 4267968 tataaaaggtt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2072660 11 - 2193130 tataaaaggtt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135089 11 - 77216781 tataaaaggtt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28047916 11 - 80997621 tataaaaggtt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104544 11 + 10377808 tataaaaggtt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989853 11 - 8458610 tataaaaggtt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934475 11 + 75148670 tataaaaggat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174179 11 + 4244037 tataaaaggta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197222 11 + 4569836 tataaaaggtt i colAng1.NW_012122154v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7020733 0 - 7032639 C e cebCap1.NW_016107730v1 1906801 0 + 1920343 C e canFam3.chr9 21504826 15840 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1855667 0 + 3513951 C e calJac3.chr5 46146667 0 - 159171411 C a score=3578106.000000 s hg38.chr17_JH159148v1_alt 29659 383 + 88070 atgttttgaggtatatatatatatacagtgtgaaataataatatatttattagctcacatagtcaccatttcctttttattgttgtggtgtgaacatttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatgtccacattagagtgcaccagatctgcagaacatattcgtcttatataactgaTGTTGGTC-ATGAGAATGTGCTAG---T---TCTCCTTTACCCCACCACCCAACGACTATCCCAGTCAGCGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCAGATATACAGTCTCAAAAGATGGCATCTGTATTTTTTAAGGAATAACTTAAGTTCATTTTGCCTTGCCAATATGTATTC s panTro5.chr17 16340757 385 + 83181570 atgttttgagatatatatatatatacagtgtgaaataatcatatatttattagctcacatagtcaccatttcctttttattgttgtggtgtgaacatttaagatccactttctcagcaaatttcaggtatacaa-aaagtattttaaactgtgtccacattagagtgcaccagatctgcagagcttattcgtcttatataactgaTGTTGGTC-ATGAGAAAGTGCTAGTTCT---TCTCCTTTACCCCACCACCCTACGACTATCCCAGTCAGCGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCAGATATACAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTCCATTTTGCCTTGTCAATATGTATTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16245637 385 + 83442489 atgttttgagatatatatatatatacagtgtgaaataatcatatatttattagctcacatagtcaccatttcctttttattgttgtggtgtgaacatttaagatccactttctcagcaaatttcaggtatacaa-aaagtattttaaactgtgtccacattagagtgcaccagatctgcagagcttattcgtcttatataactgaTGTTGGTC-ATGAGAAAGTGCTAGTTCT---TCTCCTTTACCCCACCACCCTACGACTATCCCAGTCAGCGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCAGATATACAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTCCATTTTGCCTTGTCAATATGTATTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092320 386 + 4267968 atgttttgagatatatatatatataaagtgtgaaataatcatatatttattagctcacatagtcaccatttcctttttattgttgtggtgtgaacatttaagatccattttctcagcaaatttcaggtatgcaataaagtattttaaactatgtccacattagagtgcaccagatccgcagaacgtattcgtcttatataactgaTGTTGGTC-ATGAGAATGTGCTAGTTCT---TCTCCTTTACCCCATCACCCAACGACTATCCCAGTCAGCAGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCAGATATACAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTCAGTCCATTTTGCCTTGTCAATATGTATTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2072671 378 - 2193130 atgtt--------tatatatatatatagtgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacatttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacattagagtgcaccagatctgcagaatgtattcatcttatataactgatgttggtc-atgagaatgtgctagttct---tctcctttaccccactacccAACAACTATCTCAGTCAGCGGCTTTTCTCTCTTTCTGGAATCTTCACAGCATTCCAGATATACAGTCTCAAAAGATGGTATCTGTATTTTATAAGGAATAACTTAAGTTTATTTTGCCTTGTCAATATGTATTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135100 383 - 77216781 atgttttg------atatatatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacattagagtgcaccagatctgcagaacttattcatcttatataactgaTGTTGGTC-ATGAAAATGTGCTTGGTCTTTGTCTCCTTTACCCCATCACCCAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTGAGGAATCTTCAGAGCATTCTAGATATGCAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTTTTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28047927 383 - 80997621 atgttttg------atatatatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacattagagtgcaccagatctgcagaacttattcatcttatataactgaTGTTGGTC-ATGAAAATGTGCTTGGTCTTCGTCTCCTTTACCCCATCACCCAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCTAGATATGCAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTTTTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104555 383 + 10377808 atgttttg------atatatatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacattagagtgcaccagatctgcagaacgtattcatcttatataactgaTGTTGGTC-ATGAAAATGTGCTTGGTCTTCGTCTCCTTTACCCCATCACCCAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCTAGATATGCAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTTTTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989864 382 - 8458610 atgttttg------atatatatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacattagagtgcaccagatctgcagaacttattcatcttatataactgaTGTTGGTC-ATGAAAATGTGCTTGTTCTTTGTC-CCTTTACCCCATCACCCAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCAGATATACAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934486 385 + 75148670 atgttttga----tatatatatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacgttagagtgcaccagatctgcagaacttattcatcttatataactgaTGTTGGTC-ATGAAAATGTGCTTGTTCTTTGTCTCCTTTACCCCATCACCCAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCACATATACAGTCTCAAAAGATGGCATCTGTATTTTATAAAGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174190 382 + 4244037 atgttttg------atatagatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccactttctcagcaaatttcaggtatacaataaagtattttaaactatatccacattagagtgcaccagatctgcagaacttattcatcttatataactgaTGTTGGTT-ATGAAAATGTGCTTGTTCTTTGTC-CCTTTACCCCATCACCCAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCCAGATATACAGTCTCAAAAGACGGCATCTGTATTTTATAAGGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197233 383 + 4569836 atgttttg------atatccatattcattgtgaaataatcatatatttattagctcacatagttaccatttcctttttatttttgtggtgtgaacacttaagatccgctttctcagcaaatttcaggtatacaataaagtattttagactatatccacattagagtgcaccagatctgcagaacttattcatcttatataactgatgttggtc-atgaaaatgtgctagttcttcatctcctttaccccatcacccAGTGACTATCCCAATCAGTGGCTTTTCTCTCTTTCTGGAATCTTCAGAGCATTCTAGATATACAGTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46146667 376 - 159171411 atgttttg------atacatatattcattgtgaaataatcacatatttattaactcacatggttaccatttcctttttatttttgtggtgtgaacatttaaga-caactttctcagcaaatttcaggtctacagtaaagtatttta-------tccacattagtgtacaccagatctgcagaacttattcatcatatataactgaTGTTGGCCAAAGAGAATGTGACAGTTCTTTGTCTCCTTTACCCCATCACCCAATGACTATCACAGTCAGTGGCTTTTCTCTTTTTCTGGAATTTTCAGAGCATACCAGAGATACACTCTCAAAAGATGGCATCTGTATTTTATAATGAATAACTTAAGTTTATTCTGCTGTGTCGATATGTATTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1855667 373 + 3513951 atgttttg------atacatatattcattgtgaaataatcacatatttattaactcacattgtt---atttcctttttatttttgtggtgtgaacatttaagatcagctttctcagcaaatttcaggtatacagtgaagtatttta-------tccacattagtgtacaccagatctgcagaacttattcatcatatgtaactgaTGTTGGCCAAAGAG-ATGTGATAGTTCTTTGTCTCCTTTACCCCATCACCCAATGACTATCACAGTCAGTGGCTTTTCTCCTTTTCTGGAATTTTCGGAGCATTCCAGATGTACGCTCTCAAAAGATGGCATCTGTACTTTATAAGGAACAACTGAAGTTTATTTTGCTGTGTCGAAATGTATTC i saiBol1.JH378271 C 0 I 162 s cebCap1.NW_016107730v1 1906801 377 + 1920343 atgttttg------atacatatattcattgtgaaataatcacatatttattaactcacatggttaccatttcctttttatttttgtggtgtgaacatttaagatcaactttttcagcaaatttcaggtatacagtaaagtatttta-------tccacgttaatatacaccagatctgcagaacttattcatcatatataactgaTGTTGGCCAAAGAGAATGTGATAGTTCTTTGTCTCCTTTACCCCATCACCCAATGACTATTACAGTCAGTGGTTTTTCTCTTTTTCTGGAATTTTCAGAGCATTCCAGATATACACTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTGAGTTTATTTTGCTATGTCGATATGTATTC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020733 377 - 7032639 atgttttg------atacatatattcactgtgaaataatcacatatttatttactcacatggttaccatttcctttttatttttgtggtgtgaatatttgagataaactttctcagcaaatttcaggtgtacagtaaagtgtttta-------tccacattagtgtacaccagatctgcagaagttattcatcgtatataactgaTGTTGGCCAAAGAGAATGTGATAGTTCTTTGTCTCCTTTACCCCATCACCCAATGACTATCACAGTCAGTGGCTTTTCTCTTTTTCTGGAATTTTCAGAGCATTCCAGATACACACTCTCAAAAGATGGCATCTGTATTTTATAAGGAATAACTTAAGTTTATTTTGCTGTGTCGATATGTATTC i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21504826 15840 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T a score=90066.000000 s hg38.chr17_JH159148v1_alt 30042 10 + 88070 AGG---AGAAGAA s panTro5.chr17 16341142 13 + 83181570 AGGAGAAGAAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246022 13 + 83442489 AGGAGAAGAAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092706 13 + 4267968 AGGAGAAGAAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073049 13 - 2193130 AGGAGAAGAAGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135483 13 - 77216781 AGGAGAAGAAGAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048310 13 - 80997621 AGGAGAAGAAGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104938 13 + 10377808 AGGAGAAGAAGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990246 13 - 8458610 AGGAGAAGAAGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934871 13 + 75148670 AGGAGAAGAAGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174572 13 + 4244037 AGGAGAAGAAGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197616 13 + 4569836 AGGAGAAGAAGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147043 10 - 159171411 AAGAGAAGAA--- i calJac3.chr5 C 0 T 386 s saiBol1.JH378271 1856202 10 + 3513951 aggagaagga--- i saiBol1.JH378271 I 162 C 0 s cebCap1.NW_016107730v1 1907178 10 + 1920343 aagagaagaa--- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021110 10 - 7032639 aagagaagaa--- i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21504826 15840 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T a score=10500.000000 s hg38.chr17_JH159148v1_alt 30052 1 + 88070 G s panTro5.chr17 16341155 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246035 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092719 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073062 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135496 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048323 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104951 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990259 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934884 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174585 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197629 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856212 1 + 3513951 g i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907188 1 + 1920343 g i cebCap1.NW_016107730v1 C 0 I 274 s aotNan1.NW_018502359v1 7021120 1 - 7032639 g i aotNan1.NW_018502359v1 C 0 I 416 e mm10.chr11 22122012 4010 - 122082543 I e canFam3.chr9 21504826 15840 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e calJac3.chr5 46147053 386 - 159171411 T a score=87267.000000 s hg38.chr17_JH159148v1_alt 30053 30 + 88070 GAAGCCATATAAGAATGGAAATGTTATCTG s panTro5.chr17 16341156 30 + 83181570 GAAGCCGTATAAGAATGGAAATGTTATCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246036 30 + 83442489 GAAGCCGTATAAGAATGGAAATGTTATCTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092720 30 + 4267968 GAAGCCATATAAGAACGGAAATGTTATCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073063 30 - 2193130 GAAGCCATATAAGAATGGAAATCTTATCTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135497 18 - 77216781 GAGGCCATATAAGAATGG------------ i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048324 18 - 80997621 GAGGCCATATAAGAATGG------------ i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104952 18 + 10377808 GAGGCCATATAAGAATGG------------ i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990260 18 - 8458610 GAGGCCATATAAGAATGG------------ i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934885 18 + 75148670 GAGGCCATATAAGAATGG------------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174586 18 + 4244037 GAGGCCATATAAGAATGG------------ i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197630 18 + 4569836 GAGGCCATATAAGAATGG------------ i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856213 23 + 3513951 gagg-------aggaggGAAGTGTTATCGG i saiBol1.JH378271 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7021121 416 - 7032639 I e cebCap1.NW_016107730v1 1907189 274 + 1920343 I e canFam3.chr9 21504826 15840 + 61074082 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e calJac3.chr5 46147053 386 - 159171411 T a score=2100.000000 s hg38.chr17_JH159148v1_alt 30083 1 + 88070 C s panTro5.chr17 16341186 1 + 83181570 C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246066 1 + 83442489 C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092750 1 + 4267968 C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073093 1 - 2193130 C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1856236 1 + 3513951 C i saiBol1.JH378271 C 0 C 0 s canFam3.chr9 21520666 1 + 61074082 C i canFam3.chr9 I 15840 C 0 e mm10.chr11 22122012 4010 - 122082543 I e aotNan1.NW_018502359v1 7021121 416 - 7032639 I e cebCap1.NW_016107730v1 1907189 274 + 1920343 I e manLeu1.NW_012106252v1 2174604 0 + 4244037 C e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2197648 0 + 4569836 C e chlSab2.chr16 64934903 0 + 75148670 C e cerAty1.NW_012006043v1 1990278 0 - 8458610 C e macNem1.NW_012014910v1 2104970 0 + 10377808 C e macFas5.chr16 28048342 0 - 80997621 C e rheMac8.chr16 30135515 0 - 77216781 C a score=9555.000000 s hg38.chr17_JH159148v1_alt 30084 1 + 88070 A s panTro5.chr17 16341187 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246067 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092751 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073094 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135515 1 - 77216781 A i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048342 1 - 80997621 A i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104970 1 + 10377808 A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990278 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934903 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174604 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197648 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s cebCap1.NW_016107730v1 1907463 1 + 1920343 A i cebCap1.NW_016107730v1 I 274 C 0 s aotNan1.NW_018502359v1 7021537 1 - 7032639 A i aotNan1.NW_018502359v1 I 416 C 0 s canFam3.chr9 21520667 1 + 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e dasNov3.JH570468 471583 19088 - 852752 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1856237 0 + 3513951 C e calJac3.chr5 46147053 386 - 159171411 T a score=69958.000000 s hg38.chr17_JH159148v1_alt 30085 8 + 88070 AATGTTAC s panTro5.chr17 16341188 8 + 83181570 AATGTTAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246068 8 + 83442489 AATGTTAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092752 8 + 4267968 AATGTTAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073095 8 - 2193130 AATGTTAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135516 8 - 77216781 AATGTTAC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048343 8 - 80997621 AACGTTAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104971 8 + 10377808 AACGTTAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990279 8 - 8458610 AACGTTAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934904 8 + 75148670 AACGTTAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174605 8 + 4244037 AACGTTAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197649 8 + 4569836 AACGTTAC i colAng1.NW_012122154v1 C 0 C 0 s cebCap1.NW_016107730v1 1907464 8 + 1920343 AATGTTAT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021538 8 - 7032639 AATGTTAT i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 21520668 8 + 61074082 GATGTTCC i canFam3.chr9 C 0 T 41632 s dasNov3.JH570468 490671 8 - 852752 AGTATTAC i dasNov3.JH570468 I 19088 C 0 e mm10.chr11 22122012 4010 - 122082543 I e otoGar3.GL873537 22902002 34606 + 28711273 T e saiBol1.JH378271 1856237 0 + 3513951 C e calJac3.chr5 46147053 386 - 159171411 T a score=269680.000000 s hg38.chr17_JH159148v1_alt 30093 27 + 88070 CTGCAAATACAGGAGATTACTCCTCCA s panTro5.chr17 16341196 27 + 83181570 CTGCAAATACAGGAGATTACTCCTCCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246076 27 + 83442489 CTGCAAATACAGGAGATTACTCCTCCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092760 27 + 4267968 CTGCAAATACAGGAGATTACTCCTCCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073103 27 - 2193130 CTGCAAATACAGGAGATTACTCCTCCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135524 27 - 77216781 CTGCAAATACAGGAGATTATTCCTCCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048351 27 - 80997621 CTGCAAATACAGGAGATTATTCCTCCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104979 27 + 10377808 CTGCAAATACAGGAGATTATTCCTCCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990287 27 - 8458610 CTGCAAATACAGGAGATTATTCCTCCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934912 27 + 75148670 CTGCAAATACAGGAGATTATTCCTCCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174613 27 + 4244037 CTGCAAATACAGGAGATTATTCCTCCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197657 27 + 4569836 CTGCAAATACAGGAGATTATTCCTCCA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856237 23 + 3513951 ----AAATACAGGAGGTTATTCCTCTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907472 27 + 1920343 CAGCAAATACAGGAGGTTATTCCTCTA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021546 27 - 7032639 CTGCAAATACAGGAGGTTATTCCTCTA i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 39589773 27 - 61074082 CTGCATATATGAGGGATTGTTTCTTCC i canFam3.chr9 T 444 I 2 s dasNov3.JH570468 490679 27 - 852752 CTGAATATCCGCGGGATAGTACCTCCC i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e otoGar3.GL873537 22902002 34606 + 28711273 T e calJac3.chr5 46147053 386 - 159171411 T a score=610116.000000 s hg38.chr17_JH159148v1_alt 30120 72 + 88070 --TTGTTGAG--TCAACTTAAGT-GCATGTCTTGCGAATGTAGAGTC-C-C-AAT-GTAATTTTTACTT-TAATGAGAGTTA s panTro5.chr17 16341223 72 + 83181570 --TTGTTAAG--TCAACTTAAGT-GCATGTCTTGCTAATGTAGAGTC-C-C-AAT-GTAATTTTTACTT-TAATGAGAGTTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246103 72 + 83442489 --TTGTTAAG--TCAACTTAAGT-GCATGTCTTGCTAATGTAGAGTC-C-C-AAT-GTAATTTTTACTT-TAATGAGAGTTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092787 72 + 4267968 --TTGTTAAG--TCAACTGAAGT-GCATGTCTTGCTAATGTAGAGTC-C-C-AAT-GTAATTTTTACTT-TAATGAGAGTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073130 72 - 2193130 --TTGTTAAG--TCAACTTAAGT-GCATGTCTTGCTAATGCAGAGTC-C-C-AAT-GTAATTTTTACTT-TAATGAGAGTTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135551 72 - 77216781 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAGTGCTGAGTC-C-C-AAT-GTAATTTTTATTT-TAATGAGAGTTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048378 72 - 80997621 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAGTGCTGAGTC-C-C-AAT-GTAATTTTTATTT-TAATGAGAGTTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105006 72 + 10377808 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAGTGCTGAGTC-C-C-AAT-GTAATTTTTATTT-TAATGAGAGTTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990314 72 - 8458610 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAGTGCTGAGTC-C-C-AAT-GTAATTTTTATTT-TAATGAGAGTTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934939 72 + 75148670 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAATGCTGAGTT-C-C-AAT-GTAATTTTTATTT-TAATGAGAGTTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174640 72 + 4244037 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAATGCTGAGTC-C-C-AAT-GTAATTTTTATTT-TAATGAGAGTTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197684 72 + 4569836 --TTGTTAAG--TCACCTTAAGT-GCATGTCTTGCTAATGCTGAGTC-C-C-AGT-GTAATTTGTATTT-TAATGAGAGTTA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856260 70 + 3513951 --TTGATGAG--TAAAATTAAGT-GCATGTCTTGCTAATGCTGAGTC-C-C-AGT-GTAATTCTTACTT-TATT--GAGTTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907499 70 + 1920343 --TTGATGAG--TAAAATTAAGT-GCATGTCTTGCTAATGCTGAGTC-C-C-AAT-GTAATTTTTACTT-TATT--GAGTTA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021573 70 - 7032639 --TTAATGAG--TAAAATTAAGT-GCATGTCTTGCTAATGCTGAGTC-C-C-AAT-GTAATTTTTACTT-CATT--GAGTTA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867396 74 + 28711273 --ttgttgtt--gTTGCTCAAGT-GCACAGCTCACCAGTTCTCATTCTC-C-AGTAGCAGTTCTAGTTG-CTTTGAGATGGA i otoGar3.GL873537 T 34606 C 0 s canFam3.chr9 39589802 76 - 61074082 --TTGTAAAGAATAAATACATTT-GCATAGCTTACTAGTGTTCAGTA-C-TAAAT-ATTATTGCTACTTCTATTGACATGTC i canFam3.chr9 I 2 T 2534 s dasNov3.JH570468 490706 77 - 852752 TTTTTAAAAA--TGATGTTCAGTAGTGCATCTTGCTAACACTTGGTC-TGC-AGC-ATCATTTCTACTTACACTGAGGTGGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22122012 4010 - 122082543 I e calJac3.chr5 46147053 386 - 159171411 T a score=1254868.000000 s hg38.chr17_JH159148v1_alt 30192 139 + 88070 AATATAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTAAATCTGAGTCTG--CA-TTTTTAGCTAAATAACATCACACATTAAAATTTTCCTCAGCTG--GAAAGTAGAGGTAATAAAACATGACCATCTGTTTTTATAAT s panTro5.chr17 16341295 140 + 83181570 AATGTAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTAAATCTGAGTCTG--CATTTTTTAGCTAAATAACATCACATATTAAAATtttcctcagctg--gaaagtagaggtaataaaacatgaccgtctgtttttataat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246175 140 + 83442489 AATGTAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTAAATCTGAGTCTG--CATTTTTTAGCTAAATAACATCACATATTAAAATtttcctcagctg--gaaagtagaggtaataaaacatgaccgtctgtttttataat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092859 139 + 4267968 AATATAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTAAATCTGAGTCTG--CA-TTTTTAGCTAAATAACATCACAGGTTAAAATTTTCCTCAGCTG--GAAAGTAGAGGTAATAAAACATGACCGTCTGTTTTTATAAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073202 139 - 2193130 AATATAAGTGCTCTTGGACAGAAAGAGAAGACCCTACCTTAAATCTGAGTCTG--CA-TTTTTAGCTAAATAACATCACACGTTAAAATTTTCCTCAGCTG--GGAAGTGGAGGTAATAAAACATGACGGTCTGTTTTTATAAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135623 138 - 77216781 CATGTAAGTGCTCTTGAACAGAAAGAGAAGACCCAACCTTGAATCTGAGTCTGTCCA-TTTTTAGCTAAATAACATCACACATTAAAATTTT-CTCAGCTG--GAAAGTGGAGGTAATAAAACATGA--GTCTGTTTTCAGAAT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048450 140 - 80997621 CATGTAAGTGCTCTTGAACAGAAAGAGAAGACCCAACCTTGAATCTGAGTCTGTCCA-TTTTTAGCTAAATAACATCACACATTAAaatttt-ctcagctg--gaaagtggaggtaataaaacatgactgtctgttttcagaat i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105078 140 + 10377808 CATGTAAGTGCTCTTGAACAGAAAGAgaagacccaaccttgaatctgagtctgtcca-tttttagctaaataacatcacacattaaaatttt-ctcagctg--gaaagtggaggtaataaaacatgactgtctgttttcagaat i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990386 140 - 8458610 CATGTAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTGAATCTGAGTCTGTCCA-TTTTTAGCTAAATAACATCACACGTTAAaatttt-ctcagctg--gaaagtggaggtaataaaacatgactgtctgttttcagaat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935011 140 + 75148670 CATGTAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTGAATCTGAGTCTGTCCA-TTTGTAGCTAAATAACATCACACATTAAACTTTT-CTCAGCTG--GAAAGTGGAGGTAATAAAACATGACTGTCTGTTTTCAGAAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174712 140 + 4244037 CATGTAAGTGCTCTTGGACAGAAAGAGAAGACCCAACCTTGAATCTGAGTCTGTCCA-TTTTTAGCTAAATAACATCACACGTTAAaatttt-ctcagctg--gaaagtggaaataataaaacatgactgtctgttttcagaat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197756 140 + 4569836 CATGTAAGTGCTCTTGGACAGGAAGAGAAGACCCAACCTTGAATCTGAGTCTGTCCA-TTTGTAGCTTAATAACATCGCACATTAAaatttt-ctcagctg--gaaagtggaggtaataaaacatgactgtctgttttcagaat i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856330 136 + 3513951 AATGTAAGTGCCCTTAGACAGAAAGAGAGGACCACACCTTGCGTCTGAGTCTGTCCA-TTATTAGCTAAATAACATCACACATTAAGATTTT-CTCAGCTG--GAAAGTAAAGGTAATAAAAC----CTGACTGTTTTGATAAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907569 140 + 1920343 AATGTAAGTGCCCTTGGACAGAAAGAGAGGACGACACCTTGCATCTGAGTCTGTCCA-TTATTAGCTAAATAACATCACGCATTAAAATTTT-CTCAGCTG--GAAAGTAAAGGTAATAAAACATGACTGTCTGTTTTGATAAT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021643 140 - 7032639 AATGTAAGTGCCCTTGGACAGAAAGATAGGACCATACCTTGCATCTGAGTCTGTCCA-TTATTAGGTAAATAACATCACACATTAAAATTTT-CTCAGCTG--GAAAGTAAAGGTAATAAAACATGACTGTCTGTTTTTGTAAT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867470 142 + 28711273 CATGCAGGTGCCCTTGAGCAGACACCGCAGACCCAGTCCTGGATGTCAGTGTGACTA-TTATTCACTACAAGACATTATGCTATGAAGTTTT-CTCATCTGAAAAAAATGATATTAACAATACAAGGGTAACTGTATTGAAAAG i otoGar3.GL873537 C 0 T 13972 s canFam3.chr9 21479044 134 + 61074082 AATGTGAGTGCCCTTTAGCCAGGGCAGAAGATGCAGCCTGGCATCCGATTCTGTCC--CTTTCAGCTCTGTGACATAACATTATAGGATCTC-CTCACCTG--CAAA-TGGAGATACAAATTTGTGGGGGACTAT----AGGAG i canFam3.chr9 T 41632 I 3 s dasNov3.JH570468 490783 136 - 852752 AGTGTAGGAGACCTCCACCAGAGCCAGAAGACCCAGTTCTGGACCTGAGTTTGTGCA-TTTCTACAGACATGACTTTGCACAAGTCAATTTT-CAAATCTG---AATGGAGAGGCAGTA---TTTACTGGGTTGTTTTTATGAG i dasNov3.JH570468 C 0 I 1 e mm10.chr11 22122012 4010 - 122082543 I e calJac3.chr5 46147053 386 - 159171411 T a score=109609.000000 s hg38.chr17_JH159148v1_alt 30331 11 + 88070 --CAAATTAGG-TA s panTro5.chr17 16341435 11 + 83181570 --caaattagg-ta i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246315 11 + 83442489 --caaattagg-ta i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4092998 11 + 4267968 --CAAATTAGG-TA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073341 11 - 2193130 --CAAATTAGG-TA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135761 11 - 77216781 --CAAATTAGG-TA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048590 11 - 80997621 --caaattagg-ta i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105218 11 + 10377808 --caaattagg-ta i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990526 11 - 8458610 --caaattagg-ta i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935151 11 + 75148670 --CAAATTAGG-TA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174852 11 + 4244037 --caaattagg-ta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197896 11 + 4569836 --caaattagg-ta i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856466 12 + 3513951 --CAAATTAGGTTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907709 11 + 1920343 --CAAATTAGG-TA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021783 11 - 7032639 --CAAATTAGG-TA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22853640 11 + 28711273 --CAGAATAGA-TA i otoGar3.GL873537 T 13972 C 0 s canFam3.chr9 21479181 11 + 61074082 --CCAAATGGA-TA i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 490920 11 - 852752 CAGAGAATAGA--- i dasNov3.JH570468 I 1 C 0 e mm10.chr11 22122012 4010 - 122082543 I e calJac3.chr5 46147053 386 - 159171411 T a score=4131413.000000 s hg38.chr17_JH159148v1_alt 30342 494 + 88070 ACATGTATGGTATGGAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATA-----------AA---AAAAAA--CA----CCATGTGA--GATGAAGGACAGCTTTGAGTTTATTAAGAAA----CATATAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATAAAAGAACCACGAG-----------------GAGGACACTGAA------AATGAAAACATGATTGTGAAG----------------ATTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAAGGGAATGAAGCTCTTGACTTTAGAGT-CAAGCTGAGACCATGACTCCAAATTGAAAATACATGAAGG-----------TGGCACAT-GATCCACAAGGTGTAAGGAAAAA-AGAATCAGGATGAAGTACTCTACCCTCACTCAAGCTG-ATTCACAAAA--TGTTAAACATGCAGAGAAGTCATAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTTGTTGGTTTTCATCACAGTTTGAAAGTAAATTTGT s panTro5.chr17 16341446 495 + 83181570 acatgtatgGTATGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATA-----------AA---AAAAAA-CCA----CCATGTGA--GATGAAGGACAGCTTTCAGTTTATTAAGAAA----CATATAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATAAAAGAACCATGAG-----------------GAGGACACTGAA------AATGAAAACATGATTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAAGAGAATGAAGCTCTTGACTTTAGAGT-CAAGCTGAGACCATGACTCCAAATTGAAAATACAGGAAGG-----------TGGCACAG-GATCTACAAGGTGTAAGGAAAAA-AGAATCAGGATGAAGTACTCTACCCTCACTCAAGCTG-ATTTACAAAA--TGTTAAACATGCAGAGAAGTCATAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTCGTTGGTTTTCATCACAGTTTGAAAGTAAATTTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246326 494 + 83442489 acatgtatgGTATGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATA-----------AA---AAAAAC--CA----CCATGTGA--GATGAAGGACAGCTTTCAGTTTATTAAGAAA----CATATAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATAAAAGAACCATGAG-----------------GAGGACACTGAA------AATGAAAACATGATTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAAGAGAATGAAGCTCTTGACTTTAGAGT-CAAGCTGAGACCATGACTCCAAATTGAAAATACAGGAAGG-----------TGGCACAG-GATCTACAAGGTGTAAGGAAAAA-AGAATCAGGATGAAGTACTCTACCCTCACTCAAGCTG-ATTTACAAAA--TGTTAAACATGCAGAGAAGTCATAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTCGTTGGTTTTCATCACAGTTTGAAAGTAAATTTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093009 494 + 4267968 ACATGTATGGTATGCAATATGTGTGTAAATCGC-ATATCAGGAATG---------CTGTAAAATA-----------AA---AAAAAC--CA----CCATGTGG--GATGAAGGACAGCTTTGAGTTTATTAAGAAA----CATATAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATAAAAGAACCACGAG-----------------GAGGACACTGAA------AATGAAAACATGATTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAAGAGAATGAAGCTCTTGACTTTAGAGT-CAAGCTGAGACCATGACTCCAAATTGAAAATACATGAAGG-----------TGGCACAG-GATCCACAAGGTGTAAGGAAAAA-AGAATCAGGATGAAGTACTCTACCCTCACTCAAGCTG-ATTTACAAAA--TGTTAAACATGCAGAGAAGTCATAAAAATTAGGGTG--AGCAAAGGTCACCCTAAGTTCACTTCGTTGGTTTTCATCACAGTTTGAAAGTAAATTTGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073352 496 - 2193130 ACACGTATGGTATGAAACATGTGTGTAAATCCC-ATATCAGGAATG---------CCCTAAAATA-----------AA---AAAAAA-CCA----CCATGTGA--GATGAAGGACAGTTTTGAGTTTATTAAGAAA----CATATAGGTAAGA----------GTCCCTGTTTCTAAGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATAAAAGAACCACAAG-----------------GAGGACATTGAA------AATGAAAACATGATTGTGAAG----------------ATTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAACGAAGCTGTTGACTTTAGAGT-CAAGTTGAGACCATGACTCCAAATTGAAAATACATGAAGG-----------TGGCACAT-GATCTGCAAAGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACTCTCACTCAAGCTG-ATTCACAAGA--TGTCAAACATGCAGAGAAGTCATAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTTGTTGGTTGTCATCACAGTTTGAAAGTAAATTTGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135772 494 - 77216781 ACATGTATGGTATGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATT----------AAA---AAAAAA--------ACATGTGA--GATGCAGGACAGTTTTGAGTTTATTAAGAAA----CATAAAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATACAAGAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGGGAAACAGAATGAAGCTCTTGACTTTAGAGT-CAAGTTGAGACCATGACTCCAAATTGAAAATACATAAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACCCTCACTTAAGCTG-ATTCACAAAG--TGTTAAACATGCAGAGAAGTCACAAAAATTAGGGTG--AGCAAGGTTCACCCTAAGTTCACTTTGTTGGTTGTCATCGAAGTTTGAAAGTAAATTTGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28048601 493 - 80997621 acatgtaTGGTATGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATT-----------AA---AAAAAA--------ACATGTGA--GATGCAGGACAGTTTTGAGTTTATTAAGAAA----CATAAAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATACAAGAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAATGAAGCTCTTGACTTTAGAGT-CAAGTTGAGACCATGACTCCAAATTGAAAATACATAAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACCCTCACTTAAGCTG-ATTCACAAAG--TGTTAAACATGCAGAGAAGTCACAAAAATTAGGGTG--AGCAAGGTTCACCCTAAGTTCACTTTGTTGGTTGTCATCGAAGTTTGAAAGTAAATTTGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105229 494 + 10377808 acatgtatgGTATGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATT----------AAA---AAAAAA--------ACATGTGA--GATGCAGGACAGTTTTGAGTTTATTAAGAAA----CATAAAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGGAAGGAATAA----GGATACAAGAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAATGAAGCTCTTGACTTTAGAGT-CAAGTTGAGACCATGACTCCAAATTGAAAATACATAAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGAATGAAGTACTCTACCCTCACTTAAGCTG-ATTCACAAAG--TGTTAAACATGCAGAGAAGTCACAAAAATTAGGGTG--AGCAAGGTTCACCCTAAGTTCACTTTGTTGGTTGTCATCGAAGTTTGAAAGTAAATTTGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990537 493 - 8458610 acatgtaTGGTGTGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATA-----------AA---AAAAAA--------CCATGTGA--GATGCAGGACAGTTTTGAGTTTATTAAGAAA----CATAAAGGTAAGA----------GTCCCTGTTTCTAGGGCGATAACCCAAAATGATCATGAAAGGAATAA----GGATACAAGAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAATGAAGCTCTTGACTTTAGAGT-CAAGTTGAGACCATGACTCCAAATTGAAAATACATAAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACCCTCGCTTAAGCTG-ATTCACAAAG--TGTTAAACATGCAGAGAAGTCACAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTTGTTGGTTGTCATCGAAGTTTGAAAGTAAATTTGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935162 493 + 75148670 ACATGTACGATATGCAATACGTGTGTAAATCTC-ATATCAGGAATG---------CTGTAAAATA-----------AA---AAAAAA--------ACATGTGA--GATGCAGGACAGTTTTGAGTTTATTAAGAAA----CATAAAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCTAAATGATCATGAAAGGAATAA----GGATATAAGAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACCATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAATGAAACTCTTGACTTTAGAGT-CAAGTTGAGACCATGACTCCAAATTGAAAATACAGGAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACCCTCGCTTAAGCTG-ATTCACAAAG--TGTTAAACATGCGGAGAAGTCACAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTTGTTGATTGTCATCGAAGTTTGAAAGTAAATTTGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174863 493 + 4244037 acatgtaTGGTATGCAATATGTGTGTAAATCCC-ATATCAGGAATG---------CTGTAAAATT-----------TA---AAAAAA--------ACATGTGA--GATGCAAGACAGTTTTGAGTTTATTAAGAAA----CACAAAGGTAAGA----------GTCCCTGTTTCTAGGGAGATAACCCAAAATGATCATGAAAGGAATAA----GGATACAAGAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAATGAAGCTCTTGACTTTAGAGT-CAAGGTGAGACCATGACTCCAAATTGAAAATACATAAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACCCTTGCTTAAGCTG-ATTCACAAAG--TGTTAAACATGCAGAGAAGTCACAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTTTTTGGTTGTCATCGAAGTTTGAAAGTAAATTTGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197907 495 + 4569836 acatgtaTGGTATGCAATATGTGTGTAAATCCC-ATATCAAGAATG---------CTGTAAAATA---------AAAA---AAAAAA--------ACATGTGA--GATGCAGGATAGTTTTGAGTTTATTAAGAAA----CATAAAGGTAAGA----------GTCCCCATTTCTAGGGAGATAATCCAAAATGATCATGAAAGGAATAA----GGATACAAAAACCATGGG-----------------GAGGACATTGAA------AATGAAAACATGACTGTGAAG----------------ACTATTGA-------TCAGTTGCAAAA-------------------------------CCTAAGTTT------------CTTAGAGAAACAGAATGAAGCTCTTGACTTTGGAGT-CAAGTTGAGACCACGACTCCAAATTGAAAATACATGAAGG-----------TGGCACAT-GATCCACAAGGTGTAAAGAAAAAGAGAATCAGGATGAAGTACTCTACCCTTGCTTAAGCTG-ATTCACAAAA--TGTTAAACATGCAGAGAAGTCACAAAAATTAGGGTG--AGCAAAGTTCACCCTAAGTTCACTTTGTTGGTTGTCATCGAAGTTTGAAAGTAAATTTGT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856478 475 + 3513951 ACATATATGATACACAATATGTGTGTTAACCCC-TTATCAGGAATG---------CTGTAAAATA-----------AATTTAAAAACCCCAT---CTATGTCA--GATGAAGAATGGTTTTGAGTTTATTAAGAGA----TATATAGGCAAAA----------ATCCCTGTTTCTAGGGAGATAACCAAAAGTGATCATGAAAAGAAGG-------ATACAAGAACCATGAG-----------------GAGGACACTGAA------AATGAAAAA--GACTGTGAAG----------------ATTATTGA-------TCACTTGCAAAA-------------------------------ACTGAGTTT------------CTTAGAGAAAGAGAATGAAGCTCTTGATTTTAGAGT-CAAGCTGAGATCATGACTCCAAATTGAAAATACATGAAGC-----------TAGCACAT-GATCCACAAAGTGTAAAGAAAGAGAGAATCAGGCTGAAATATTCTGCCCTCACTCAAGCTG-ATTCTTAAGA--TGTTAAATATGCAGAGAAGTCATAAAAATTAGAGCG--ACCA---------------------TGCTGGTTGTCAGCAAAGTTTGAAAGGAAATTTGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907720 477 + 1920343 ACATATATGGTACACAATATGTGTGTTAACCCC-CTATCAGGAATG---------CTGTAAAATA-----------AATTAAAAAACCCCA----CAATGTAA--GATAAAGAATGGCTTTGAGTTTATTAAGATA----TATATAGGCAAAA----------ATCCCTGTTTCTAGGGAGATAACCAAAAGAAATCATGAAAAGAAGAA----GTATACAAGAGCCATGAG-----------------GAGGACATTGAA------AATGTAAAA--GACTGTGAAG----------------ATTATTGA-------TCACTTACAAAA-------------------------------ACTAAGTTT------------CTTAGAGAAAGAGAATGAAGCTTTTGATTTTAGAGT-CAAGCTGAGACCACGACTCCAAATTGAAAATACATGAAGC-----------TAGCTCAT-GGTCCAAAAAGTGTAAAGAAAGAGAGAATCAGGCTGAAGTAATCTGCCCTCAATCAAGCTC-ACTCAGAAAA--TTTTAAACATGCAGAGAAGTCATAAAAATTAGAGTG--AACA---------------------TGCTGGTTGTCAGCAAAGTTTGAAAGGAAATTTGT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021794 479 - 7032639 ACATATATGGTACACAATATGTGTGTAAATCCC-CTATCAGGAATG---------CTGTAAAATA-----------AATTTAAAAACCCCACTCACTATGTAA--GATGAAGAATGGTTTTGAGTTTATTAAGAAA----TATATAGGCAAAA----------ATCCCTGTTTCTAGGGAGATAAACGAAAGTGATCATGAAAAGAAGAA----GGATACAAGAGCCATGAG-----------------GAGGACATTGAA------AATG--AAA--GACTGTGAAG----------------ATTATTGA-------TCACTTGCAGAA-------------------------------ACTAAGTTT------------CTTAGAGAAAGAGAATGAAGCTCTTGATTTTAGAGT-CAAGCTGAGACCATGACTCCAAATTGAAAATACATGAAGC-----------TAGCACAT-GACCCACAAACTGTAAAGACAGAGAGAATCAGGCTGAAGTATTCTGCCCTCACTCAAGCTG-ATTTATAAGA--TGTTAAACATGCAGAGAAGTCATAAAAATTAGGGTG--AACG---------------------TGCTGGTTGTCAGCAAAGTTTGAAAGTAAATTTGT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22853651 498 + 28711273 ATAATCATGAAATAAAATATGAACAGAAGGCCT--TATAAGTAA-------------ATGAAATACCCCCCCCCCAAA---AAAAAA-TCA----CAGTAAAG--GCTGGAAGATAGCAAAGACTTTATTGGGAAGGCATCATGGAAGCTGCA--------------------CTGGGAAAAAAATGCAAAGTGATCATGAAAAGAAAAAAGTCAGACAGAAGAATAGTAAGTCTATTACAAAAATTATGATTATAATGAAATGGTTAATGTGGAAAAGCCTGTGAAA----------------GCAATTAT-------AAAGATTTCTAT-------------------------------TTTAGGTTA------------GTTAGAG----GGAATGTGATAATCAGTTTTCCA----AGGCTGGGACAATGGCAATAAGTCAAGGAGACTCAAAGAAGAGCTGCACCTGTCACAGAGCTCAACAGCAAATACAGACACAGAAGGTCAGGGCGAAGTCAGCTGCTTCTCACCAAGCCA-AATCACAAAGCCTGTTAATCA-----AGAAACTGAGAGAAAGATGGTGGCAGCA---------------------TGCTGGATGTCAGT--------AAAGTGGGCTTGT i otoGar3.GL873537 C 0 I 18 s mm10.chr11 22126022 450 - 122082543 acatgtgaga-atgggttgcacatgtagatctt-ctatca--aatggctttaccTCGGAATAGTA-----------AA---GACAGA--------CAATATGG--GATGGAATATGGT----ACATAATTAAGAAT--------TTGTCAAGG----------CTCCCTACGTTTTCTGAGAGAGC---GGCTTCTCAGGAAGAAGAAAG----TAGCATAAGA---CTATG-----------------GAGTGCACTGTA------GAATGAAGTGTGATTAGAAAGTGCATGAAGCTAAGGCATTATAGT-------GAATTTGC-TCT-------------------------------CCTAAGTTA------------TTTAGAG-GATGGGGTAAAGACCTTGGCATAGCATT-GAAGCTTAAGTGA-GACTTCTGCATGAGACGGCATGGGAG-----------CTGCAATC-G-----CAGGAAGTGAATGAAAG------------CAAGAACTCTGGATTCACTTAAGGAA-ATT---AAGG--T------------------TTAAAAAAATGATGATT--AACAATTTT---TTTGGTGTTAGCCTAATGGCTTTTAGCAC-------AAGTAAGTGTGT i mm10.chr11 I 4010 C 0 s canFam3.chr9 21479192 470 + 61074082 ATGCACATAGTATGGGACCC-TGTGCATACATT-TTGTCATGAATG---------TTGAACAAGG-----------AC---ATGGAC---A----CCATATGG--GATGCAGAATGGTACAGGGTTTATTAAGAGA------TATAGGTGAGACCCTCCCCCCACCACTGCATGGAGGGAGGCC-TTTGAAAGGTTCATGCAAGGATGAAAAGAGGATACAAGGACTGTGAG-----------------GAA-----TGGA------ATAGAAAACTTGATCCTAAACTTTC------------ATTAGTGTCAGATACTTATCTATGATG-------------------------------CATGAATTTTTTTCTCTACACCTTAGTGGGATGGAAGTGAGATCTGCACTGTGTTGT-ATTGCAGATATGATGAATCCATA-TAACTATATAGGAAGC-----------TGGCACAT-GATTTACAGAC----AGAAAGAACAGACTCAGTGAGAAGGGACATATATTTCATAAAGGTA-CTTCACATTC--TTTGGAATAGCCTAATGAGTCTTAAACATTACAGTG--A-------------------------------------------TTGGAAATGGGT---- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 490931 505 - 852752 AAATGCTT---ATGGGATATGTATATAAATCCCTATATCAGGAAGG---------CTGTACAACA-----------AA---AAGAAA--------ACATGATATGGATGAATAATTGCATACAGTTTATTGAGAGA----CATGTAGGAAAGA----------CTCCTTCCATCTAGAGAGGCAACTCAAACTGATCATAAAAAGAAAAGAGGAAGATGCAGGAATCATGGA--------------------TATATTTTA------AAT-AAAATGTGATTGTGAAG----------------ATTACGGA-------TCAATTAAAGAAATCTATGAAAAGAGTTATGAGCACTTGTTTGCTTAAGTTA------------CATGGAGATAGTAGTTGAATTGCTTGTCATCAGACTGAAAGCTGGGGACATTCAGTCATGGTGTGAATAAAAGAAG------------TAGAACAT-GATCCAGAAGATATAAGGGAGAAGCAAATAAGGATGAAATAGTCAGCATTCCGTCAAGGTGAATTCAGTAGC--TTTTGTACATGCAGATGAATAACTC-CATTTTGCTG--A-------------------CAGTATGCTGTATGTTAGTAAAGTCTAGGAAGTGATTTGT i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T a score=25859.000000 s hg38.chr17_JH159148v1_alt 30836 9 + 88070 CCCCCAG----AA-- s panTro5.chr17 16341941 9 + 83181570 CCCCCAG----AA-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246820 9 + 83442489 CCCCCAG----AA-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093503 9 + 4267968 CCCCCAG----AA-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073848 9 - 2193130 CCCCCAA----AA-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136266 9 - 77216781 CCTCTAA----AA-- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049094 9 - 80997621 CCTCTAA----AA-- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105723 9 + 10377808 CCTCTAA----AA-- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991030 9 - 8458610 CCTCTAA----AA-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935655 9 + 75148670 CCTCCAA----AA-- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175356 9 + 4244037 CCTCTAA----AA-- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198402 9 + 4569836 CCTCCAA----AA-- i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856953 13 + 3513951 CCTCCAAGTGAAG-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908197 13 + 1920343 CCTCCAAGTGGAG-- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7022273 13 - 7032639 CCTCCAAGTGGAG-- i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22126472 3 - 122082543 ---TTA--------- i mm10.chr11 C 0 C 0 s canFam3.chr9 21479662 2 + 61074082 -----------GA-- i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 491436 9 - 852752 --CCCAG----GAGG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22854149 18 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T a score=403848.000000 s hg38.chr17_JH159148v1_alt 30845 53 + 88070 GGTAAATCTTTTGCCAGAGGGTTAC-TGTATGGGGA-TGATGGTCCTCTGCGGAA s panTro5.chr17 16341950 53 + 83181570 GATAAATCCGTTGCCAGAGGGTTAC-TGTATGGGGA-TGATGGTCCTCTGCAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246829 53 + 83442489 GATAAATCTGTTGCCAGAGGGTTAC-TGTATGGGGA-TGATGGTCCTCTGCAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093512 53 + 4267968 GATAAATCTGTTGCCAGAGGGTTAC-TGTATGGGGA-TGATGGTCCTCTGCAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073857 53 - 2193130 GAGAAACCTGTTGCCAGAGGGTTAC-TGTATGGGGA-TGATGGTCCTCTGCGGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136275 53 - 77216781 GATAAATCTGTTGCCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049103 53 - 80997621 GATAAATCTGTTGCCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105732 53 + 10377808 GATAAACCTGTTGCCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991039 53 - 8458610 GATAAATCTGTTGCCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935664 53 + 75148670 GATAAATCTATTGCCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175365 53 + 4244037 GATAAATCTGTTGCCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198411 53 + 4569836 GATAAATCTGTTGTCAGAGGGTTAT-TGTATGGGGA-TGATGGTCCTCTGTGGAA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1856966 52 + 3513951 GACAGA-AGGTTGCCAGAACATTGT-CTTGTGAGGA-TGATGGTCCTTTTGGGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908210 52 + 1920343 GACAGA-AGGTTGCCAGAACATTGT-CTTGTGAGGA-TGATGGTCCTTTTGGGAA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7022286 52 - 7032639 GACAGA-AGGTTGCCAGAACGTTGT-CTTGTGAGGA-TGATGGTCCTTTTGGGAG i aotNan1.NW_018502359v1 C 0 I 1146 s otoGar3.GL873537 22854167 50 + 28711273 GGCAGATTGGTTGTCAGGAGGTTGTCTGTGTCAGGA-----GATTCCATGGTGAG i otoGar3.GL873537 I 18 C 0 s mm10.chr11 22126475 51 - 122082543 GGTAAGTCG--TG-CAGACATTTGT-CCCCTGGGCATTGATCATCCTCCTCAGGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21479665 37 + 61074082 GGCAAA----------------CAT-TTTTTGCACA-TTGTATTTCTTTGTGAAG i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 491445 52 - 852752 GGCGAGTCAGTTGACAGTAGGTTGG-TCTGTGCCCT-TGGTGGTTTTTGGTGAG- i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T a score=318235.000000 s hg38.chr17_JH159148v1_alt 30898 34 + 88070 CTGATCAGCAGCAAGC------------AGGCTGACAGCAGCTGGT s panTro5.chr17 16342003 34 + 83181570 CTGATCAGCAGCAAGC------------AGGCTGACAGCAGCTGGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246882 34 + 83442489 CTGATCAGCAGCAAGC------------GGGCTGACAGCAGCTGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093565 34 + 4267968 TTGATCAGCAGCAAGC------------AGGCTGACAGCAGCTGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073910 34 - 2193130 TTGATCAGCAGCAAGC------------AGGCTGACAGCAGCTGGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136328 34 - 77216781 CCGATCAGCAGCAAAC------------AGGCTGGCAGCAACTGCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049156 34 - 80997621 CCGATCAGCAGCAAAC------------AGGCTGGCAGCAACTGCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105785 34 + 10377808 CCGATCAGCAGCAAAC------------AGGCTGGCAGCAACTGCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991092 34 - 8458610 CCGATCAGCAGCAAAA------------AGGCTGGCAGCAACTGCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935717 34 + 75148670 TAGATCAGCAGCAAAC------------AGGCTGGCAGCAAGTGCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175418 34 + 4244037 CCGATCAGCAGCAAAC------------AGGCTGGCAGCAACTGCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198464 34 + 4569836 TTGATCAGCAGCAAGA------------AGGCTGGCAGCAACTGCT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1857018 34 + 3513951 CTGATCAGCAGCAGGA------------AGGCTGGCAGCAGCTGGT i saiBol1.JH378271 C 0 I 5758 s cebCap1.NW_016107730v1 1908262 34 + 1920343 CTGATCAGCAGCAGCA------------AGGCTGGCAGCAGCTGGT i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854217 32 + 28711273 AGGATCAGCAGCAGGA------------AGGCTGGCAGCAGCTG-- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126526 45 - 122082543 CTGA-CAGCAGCTGGACACACAGCTGCTGGGCTCACTGCAGCTGCT i mm10.chr11 C 0 I 3 s canFam3.chr9 21479702 33 + 61074082 -CAACCAACAGCAAAA------------TGTTTGGCTGAAGCTGAA i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 491497 34 - 852752 TTGATCAGCAGCAGGA------------AGGCTGACAGCAACTGGA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=501492.000000 s hg38.chr17_JH159148v1_alt 30932 51 + 88070 --CACA----------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTAGTCTCACAGCA s panTro5.chr17 16342037 51 + 83181570 --CACA----------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTTGTCTCACAGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246916 51 + 83442489 --CACA----------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTTGTCTCACAGCA i panPan2.chr17 C 0 I 4108 s gorGor5.CYUI01015385v1 4093599 51 + 4267968 --CACA----------------CAGCTGGGCTGGAAGCAAGCGGTCCTGCAGCAGGTGGTCTCACAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073944 51 - 2193130 --CACA----------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCACGTGGTCTCACAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136362 51 - 77216781 --CACA----------------CAGGTGGGCTGGAAACAAGTGGTCCTGCAGCAGGTGGTCTCACAGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049190 51 - 80997621 --CACA----------------CAGGTGGGCTGGAAACAAGTGGTCCTGCAGCAGGTGGTCTCACAGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105819 51 + 10377808 --CACA----------------CAGGTGGGCTGGAAACAAGTGGTCCTGCAGCAGGTGGTCTCACAGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991126 51 - 8458610 --CACA----------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935751 51 + 75148670 --CACA----------------CACGTGGGCTGGAAACAAGTGGTCCTGCAGCAGGTGGTCTCACAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175452 51 + 4244037 --CACA----------------CAGGTGGGCTGGAAACAAGTGGTCCTGCAGCAGGTGGTCTCACAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198498 51 + 4569836 --CACA----------------CAGGTGGGCTGGAAGCAAGCAGTCCTGCAGCAGGTGGTCTCACAGCA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1862810 51 + 3513951 --CACA----------------CAGGTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTCACAGCA i saiBol1.JH378271 I 5758 C 0 s cebCap1.NW_016107730v1 1908296 51 + 1920343 --CACA----------------CAGGTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTCACAGCA i cebCap1.NW_016107730v1 C 0 C 0 s mm10.chr11 22126574 51 - 122082543 --CACA----------------AGGACTGGTTTAAAATAGGTAGTCCTACAGCAAATGGTTTCATAGCA i mm10.chr11 I 3 C 0 s canFam3.chr9 21479738 41 + 61074082 --CACA--------------------------ACAAGAGAGTGGTCCTTTAGCAATTATTCTGACAGCA i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 491531 69 - 852752 CACACAGCAAGGGCTGCTGCAGCAGCTGGGGCGGCAGCAGGTGGTTCTACAGCAGGTGGTCTGACAGCA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e otoGar3.GL873537 22854249 0 + 28711273 C e calJac3.chr5 46147053 386 - 159171411 T a score=192938.000000 s hg38.chr17_JH159148v1_alt 30983 17 + 88070 GGCTGGGCGGCAGCACG s panTro5.chr17 16342088 17 + 83181570 GGCTGGGCGGCAGCAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251075 17 + 83442489 GGCTGGGCGGCAGCAGG i panPan2.chr17 I 4108 C 0 s gorGor5.CYUI01015385v1 4093650 17 + 4267968 GGCTGGGCGGCAGCAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2073995 17 - 2193130 GGCTGGGCGGCAGCAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136413 17 - 77216781 GGCTGGGCGGCAGCAGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049241 17 - 80997621 GGCTGGGCGGCAGCAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105870 17 + 10377808 GGCTGGGCGGCAGCAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991177 17 - 8458610 GGCTGGGCGGCAGCAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935802 17 + 75148670 GGCTGGGCGGCAGCAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175503 17 + 4244037 GGCTGGGCGGCAGCAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198549 17 + 4569836 GGCTGGGCGGCAGCAGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1862861 17 + 3513951 GGCTGGGTGGCAGCAGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908347 17 + 1920343 GGCTGGGCGGCAGCAGG i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854249 13 + 28711273 ----GATCCACAGCCCA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126625 17 - 122082543 AGATGGTTGACAGCAGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21479779 17 + 61074082 GGTTGGTTGGCAGCAAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491600 17 - 852752 GGAGGGGCGGCAGCAGG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=177552.000000 s hg38.chr17_JH159148v1_alt 31000 16 + 88070 GCTGGCAGCAGCTGGA s panTro5.chr17 16342105 16 + 83181570 GCTGGCAGCAGCTGGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251092 16 + 83442489 GCTGGCAGCAGCTGGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093667 16 + 4267968 GCTGGCAGCAGCTGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2074012 16 - 2193130 GCTGGCAGCAGCTGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136430 16 - 77216781 GCTGGCAGCAGCTGGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049258 16 - 80997621 GCTGGCAGCAGCTGGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105887 16 + 10377808 GCTGGCAGCAGCTGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991194 16 - 8458610 GCTGGCAGCAGCTGGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935819 16 + 75148670 GCTGGCAGCAGCTGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175520 16 + 4244037 GCTGGCAGCAGCTGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198566 16 + 4569836 GCTGGCAGCAGCTGGA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1862878 16 + 3513951 GCTGGCAGCAGCTGGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908364 16 + 1920343 GCTGGCAGCAACTGGA i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854262 16 + 28711273 GGTTCAGACAACCAGG i otoGar3.GL873537 C 0 I 95 s canFam3.chr9 21479796 16 + 61074082 GCTGACAACAGTTGGA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491617 16 - 852752 GCTGGCAGCAGCTGGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22126642 0 - 122082543 C e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=741600.000000 s hg38.chr17_JH159148v1_alt 31016 79 + 88070 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGTAGACACTCGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGATG--GG-----TGCA s panTro5.chr17 16342121 79 + 83181570 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACAGTTGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACG--GG-----TGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251108 79 + 83442489 GCCACAGCTCTGGTTGAGGCAACCAGGCAGGTAGACAGTCATGGGGTGGTAGCAGGTTCTCCTGCAGTAGACG--GG-----TGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093683 79 + 4267968 GCCACAGCTCTGGTTTAGGCAGCCAGGCAGGCAGACAGTTGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACG--GG-----TGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2074028 79 - 2193130 GCCACAGCTCTGGTTTAGGCCACCAGGCAGACAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACG--GG-----TGCA i nomLeu3.chrUn_GL397460_1 C 0 I 4755 s rheMac8.chr16 30136446 79 - 77216781 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACA--GG-----TGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049274 79 - 80997621 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACA--GG-----TGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105903 79 + 10377808 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACA--GG-----TGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991210 79 - 8458610 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTCCTCCTGCAGTAGACA--GG-----TGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935835 79 + 75148670 GCCACAGCTCTGATCTAGGCAACCAGGCAGGCAGACACATGTAGGGTGGTAGCAGGTTCTCCTGCAGTAGACA--GG-----TGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175536 79 + 4244037 GCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACA--GG-----TGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198582 79 + 4569836 GCCACAGCTCTGGTCTAGGCAACCAGGCAGGCAGACACACGTTGGGTGGTAACAGGTTCTTCTGCAGTAGACA--GG-----TGCA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1862894 79 + 3513951 TCCACAGCTCTGGTTCAGGCAACCGGGCAGGCGGACACATGTGGGGTGGTAGCAGGTTCTTGTGCAGTACACA--GG-----GGCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908380 79 + 1920343 TCCACAGCTCTGGTTTAGGCAACCAGGCAGGTAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTACACA--GG-----TGCA i cebCap1.NW_016107730v1 C 0 C 0 s canFam3.chr9 21479812 81 + 61074082 TCCACAGCCTTGGGCTAGGCACCCAGGCAGGCAGCAGCAGGTGGGTTGGTAGCAGGTTCTTCTGCAGTACACAGGGG-----TGCA i canFam3.chr9 C 0 I 40 s dasNov3.JH570468 491633 84 - 852752 TCCAAAGCTCTGGGGTTGGCAGCCAGGCAGGCAGCAGCATGTTGGGTGGTAGCAGGTTCTCCGGCAGTACACA--GGGCCACTGCA i dasNov3.JH570468 C 0 I 25 e mm10.chr11 22126642 0 - 122082543 C e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e otoGar3.GL873537 22854278 95 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T a score=586589.000000 s hg38.chr17_JH159148v1_alt 31095 61 + 88070 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC s panTro5.chr17 16342200 61 + 83181570 CAGGAGCTGGGCTGGCAGAAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251187 62 + 83442489 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGCTGGTTTTGGCCACAGCAGCTGGACCCAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093762 61 + 4267968 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2078862 61 - 2193130 CAGCAGCTGGGCTGGCAGCAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC i nomLeu3.chrUn_GL397460_1 I 4755 C 0 s rheMac8.chr16 30136525 61 - 77216781 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGTTGG-TTTGGCCACAGCAGCTGGACCCAC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049353 61 - 80997621 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGTTGG-TTTGGCCACAGCAGCTGGACCCAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2105982 61 + 10377808 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGTTGG-TTTGGCCACAGCAGCTGGACCCAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991289 61 - 8458610 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAGTTGG-TTTGGCCACAGCAGCTGGACCCAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935914 61 + 75148670 CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175615 61 + 4244037 CAGGAGCTGGGCTGGCAGCAGCTGGACCCACAATTGG-TTTGGCCACAGCAGCTGGACCCAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198661 61 + 4569836 CAGGAGCTGGGCTGGCCACAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1862973 61 + 3513951 CAGGAGCTGTTCTGACCACAGCTGGACCCACAGCTGG-TTTGGCCACAGCAGCTGGACCCAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908459 61 + 1920343 CAGGAGCTGGGCTGGCCACAGCTGGACCCACAGCTGG-TTTGGCCAAAGCAGCTGGACCCAC i cebCap1.NW_016107730v1 C 0 C 0 s canFam3.chr9 21479933 61 + 61074082 CGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCATG-TGGGCTTGCAGCAGGTGGTCCTAC i canFam3.chr9 I 40 C 0 s dasNov3.JH570468 491742 61 - 852752 CAGCAACTGGGGCGGCAGCAGCTGTACCTACCACAAG-TTTGGCCACAGGAGCTGGACCCAC i dasNov3.JH570468 I 25 C 0 e mm10.chr11 22126642 0 - 122082543 C e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e otoGar3.GL873537 22854278 95 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T a score=91425.000000 s hg38.chr17_JH159148v1_alt 31156 9 + 88070 AGCAGATGG s panTro5.chr17 16342261 9 + 83181570 AGCAGGTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251249 9 + 83442489 AGCAGGAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093823 9 + 4267968 AGCAGATGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2078923 9 - 2193130 AGCAGGTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136586 9 - 77216781 AGCAGGAGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049414 9 - 80997621 AGCAGGTGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106043 9 + 10377808 AGCAGGTGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991350 9 - 8458610 AGCAGGAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935975 9 + 75148670 AGCAGATGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175676 9 + 4244037 AGCAGGAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198722 9 + 4569836 AGCAGGTGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1863034 9 + 3513951 AGCATGTGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908520 9 + 1920343 AGCAGGTGG i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854373 9 + 28711273 GGCAGCTGG i otoGar3.GL873537 I 95 C 0 s canFam3.chr9 21479994 9 + 61074082 AGCAGGTGG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491803 9 - 852752 AACAGGTGG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22126642 0 - 122082543 C e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=231860.000000 s hg38.chr17_JH159148v1_alt 31165 23 + 88070 GC-------------------TGGCAGCAGGGTGTGCTGCAG s panTro5.chr17 16342270 23 + 83181570 GC-------------------TGGCAGCAGGGTGTGTTGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251258 23 + 83442489 GCNNNNNNNNNNNNNNNNNNNNG------------------- i panPan2.chr17 C 0 I 44792 s gorGor5.CYUI01015385v1 4093832 23 + 4267968 GC-------------------TGGCAGCAGGGTGTGCTGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2078932 23 - 2193130 GC-------------------TGGCAGCAGGGTGTGCTGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136595 23 - 77216781 GC-------------------TGGCAGCAGGGTGTGCTGCAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049423 23 - 80997621 GC-------------------TGGCAGCAGGGTGTGCTGCAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106052 23 + 10377808 GC-------------------TGGCAGCAGGGTGTGCTGCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991359 23 - 8458610 GC-------------------TGGCAGCAGGGTGTGCTGCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64935984 23 + 75148670 GC-------------------TGGCAGCAGGGTGTGCTGCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175685 23 + 4244037 GC-------------------TGGCAGCAGGGTGTGCTGCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198731 23 + 4569836 GC-------------------TGGCAGCAGGGTGTGCTGCAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1863043 23 + 3513951 GC-------------------TGGCAGCAGGGTGTGCTGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908529 23 + 1920343 GC-------------------CGGCAGCAGGGTGTGCTGCAG i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854382 23 + 28711273 GC-------------------TGGCAGCAGGGTGTGCTACAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126642 23 - 122082543 GC-------------------TGGCAGCAGGATGTGCTGCAG i mm10.chr11 C 0 I 12 s canFam3.chr9 21480003 23 + 61074082 -------------------TTTGACAGCAAGTTGGGCGGCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491812 23 - 852752 GC-------------------TGGCAGCAGGGAGTGGTGCAA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=139937.000000 s hg38.chr17_JH159148v1_alt 31188 17 + 88070 CAGGAA---------------------------GGCTGGCAGCA s panTro5.chr17 16342293 17 + 83181570 CAGGAA---------------------------GGCTGGCAGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296073 17 + 83442489 CAGGAA---------------------------GGCTGGCAGCA i panPan2.chr17 I 44792 C 0 s gorGor5.CYUI01015385v1 4093855 17 + 4267968 CAGGAA---------------------------GGCTGGCAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2078955 17 - 2193130 CAGGAA---------------------------GGCTGGCAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136618 17 - 77216781 CAGGAA---------------------------GGCTGGCAGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049446 17 - 80997621 CAGGAA---------------------------GGCTGGCAGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106075 6 + 10377808 CAGGAA-------------------------------------- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991382 17 - 8458610 CAGGAA---------------------------GGCTGGCAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936007 17 + 75148670 CAGGAA---------------------------GGCTGGCAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175708 44 + 4244037 CAGGAAGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198754 17 + 4569836 CAGGAA---------------------------GGCTGGCAGCA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1863066 17 + 3513951 CAGGAA---------------------------GGCTGGCAGCA i saiBol1.JH378271 C 0 I 5504 s cebCap1.NW_016107730v1 1908552 17 + 1920343 CAGGAA---------------------------GGCTGGCAGCA i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854405 4 + 28711273 CAGG---------------------------------------- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126677 17 - 122082543 CAGCAC---------------------------ACCTGGCAGCA i mm10.chr11 I 12 C 0 s canFam3.chr9 21480026 17 + 61074082 CAGCAA---------------------------GGTTGGCAGCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491835 17 - 852752 CAGGAA---------------------------GGGCGGCAGCA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=45641.000000 s hg38.chr17_JH159148v1_alt 31205 4 + 88070 GCTG s panTro5.chr17 16342310 4 + 83181570 GCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296090 4 + 83442489 GCTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093872 4 + 4267968 GCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2078972 4 - 2193130 GCTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136635 4 - 77216781 GCTG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049463 4 - 80997621 GCTG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 1991399 4 - 8458610 GCTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936024 4 + 75148670 GCTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175752 4 + 4244037 GCTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198771 4 + 4569836 GCTG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868587 4 + 3513951 GCTG i saiBol1.JH378271 I 5504 C 0 s cebCap1.NW_016107730v1 1908569 4 + 1920343 GCTG i cebCap1.NW_016107730v1 C 0 I 138 s otoGar3.GL873537 22854409 2 + 28711273 --TG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126694 4 - 122082543 GGTG i mm10.chr11 C 0 I 4 s canFam3.chr9 21480043 4 + 61074082 GCTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491852 4 - 852752 GCTG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T e macNem1.NW_012014910v1 2106081 0 + 10377808 C a score=456017.000000 s hg38.chr17_JH159148v1_alt 31209 51 + 88070 GTCACACAGGTGGGCTGGCAGCAGGTGGTCCTG------------CAGCAGGTGTTTTGACAG s panTro5.chr17 16342314 51 + 83181570 GTCACACAGGTAGGCTGGCAGCAGGTGGTCCTA------------CAGCAGGTGTTTTGACAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296094 51 + 83442489 GTCACACAGGTGGGCTGGCAGCAGGTGATCCTG------------CAGCAGGTGTTTTGACAG i panPan2.chr17 C 0 T 49158 s gorGor5.CYUI01015385v1 4093876 51 + 4267968 GTCACACAGGTAGGCTGGCAGCAGGTGGTCCTA------------CAGCAGGTGTTTTGACAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2078976 51 - 2193130 GTCACACAGGTCGGCTGGCAGCAGGTGGTCCTA------------CAGCAGGTGTTTTGACAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136639 63 - 77216781 GTCACACAAGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTGGACAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049467 63 - 80997621 GTCACACAAGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106081 51 + 10377808 ------------GGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991403 63 - 8458610 GTCACACAGGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936028 63 + 75148670 GTCACACAGGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175756 63 + 4244037 GTCACACAGGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198775 51 + 4569836 GTCATACAGGTGGGCTGGCAGCAGGTGGTCCTA------------CAGCACGTGTTTTGACAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868591 51 + 3513951 GACACACAGGTGGGTTGGCAGCATGTGGTCCTG------------CAGCAGGTGGTCTCACAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908711 51 + 1920343 GTCACACAGGTGGGCTGGCGGCAGGTGGTCCTG------------CAGCAGGTGTTTTGACAG i cebCap1.NW_016107730v1 I 138 C 0 s otoGar3.GL873537 22854411 51 + 28711273 GTGACAGAGGTGGGTTTCCAGCAGGTGGTCCTG------------CAGCAGGTGGTTGGACAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126702 50 - 122082543 CTCTTATCTGTTGGCTTACAAC-GGTAGTCTTG------------TAGCATGTAGTTTCACAG i mm10.chr11 I 4 C 0 s canFam3.chr9 21480047 39 + 61074082 ------------GACCCGCAGCAGCTGGACCCA------------CTGCAGCCTTGTCCACAG i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 491856 51 - 852752 GTCACACAGGTTGGCTGGCAGCAGGTGGTCCTA------------CAGCAGGTGGTCCGACAG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=544678.000000 s hg38.chr17_JH159148v1_alt 31260 46 + 88070 CAAGTTGGGTGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG s panTro5.chr17 16342365 46 + 83181570 CAAGTTGGGTGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16246987 46 + 83442489 CAAGTTGGGTGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i panPan2.chr17 T 49158 C 0 s gorGor5.CYUI01015385v1 4093927 46 + 4267968 CAAGTCGGATGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079027 46 - 2193130 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136702 46 - 77216781 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28049530 46 - 80997621 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106132 46 + 10377808 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991466 46 - 8458610 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936091 46 + 75148670 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175819 46 + 4244037 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCACG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198826 46 + 4569836 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868642 46 + 3513951 CAGGCTGGGTGGCAGCAGGGCTG------------------------------GCAGCAGCTGGACACACAGCAGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908762 46 + 1920343 CAAGTTGGGCGGCAGCAAGGCTG------------------------------GTAGCAGCTGGACACACAGCAGG i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854462 46 + 28711273 CAAGTGGGGCGGCAGCAGGGCTG------------------------------GCAGCAGCTGGACTCACAGCAGC i otoGar3.GL873537 C 0 I 1 s mm10.chr11 22126752 76 - 122082543 CAAGTTGGTTGGCAACAGGGTTGATAGAAGCCGTAGTTAGTGTAAATTTGGCCACAGCAGCTGGGCCCACAGCAGT i mm10.chr11 C 0 I 1 s canFam3.chr9 21480089 46 + 61074082 CTGGACCCACAGCAGCTAGGCTG------------------------------GCAGCAGCTGGACACACAGCATG i canFam3.chr9 I 3 I 1 s dasNov3.JH570468 491907 41 - 852752 CAGAGTGGGCGGCAGCAAGGCTG------------------------------GCAGCAGCTGGACCCACA----- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T a score=8281.000000 s hg38.chr17_JH159148v1_alt 31306 1 + 88070 A s panTro5.chr17 16342411 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247033 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093973 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079073 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136748 1 - 77216781 A i rheMac8.chr16 C 0 I 30 s macNem1.NW_012014910v1 2106178 1 + 10377808 A i macNem1.NW_012014910v1 C 0 I 60 s cerAty1.NW_012006043v1 1991512 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936137 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175865 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198872 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868688 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908808 1 + 1920343 A i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 491948 1 - 852752 A i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22126828 1 - 122082543 I e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e canFam3.chr9 21480135 1 + 61074082 I e otoGar3.GL873537 22854508 1 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=489906.000000 s hg38.chr17_JH159148v1_alt 31307 58 + 88070 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACAGTGGTGGGCTTCCAGCAGGTG s panTro5.chr17 16342412 58 + 83181570 GGGCTGGCAGCAGGGTGTGCTGCAGCAGGTGGTCACAGTGGTGGGCTGCCAGCAGGTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247034 58 + 83442489 GGGCTGGCAGCAGGGTGTGCTGCGGCAGGTGGTCACAGTGGTGGGCTGCCGGCAGGTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4093974 58 + 4267968 GGGCTGGCAGCAGGGTGTGCTGCAGCAGGTGGTCACAGTGGTGGGCTGCCAGCAGGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079074 58 - 2193130 GGGCTGGCAGCAGGGTGTGCTGCGGCAGATGGTCACAGTGGTGGGCTGCCAGCAGGTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136779 58 - 77216781 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACACAGGTGGGCTTCCAGCAGGTG i rheMac8.chr16 I 30 C 0 s macNem1.NW_012014910v1 2106239 58 + 10377808 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACACAGGTGGGCTTCCAGCAGGTG i macNem1.NW_012014910v1 I 60 C 0 s cerAty1.NW_012006043v1 1991513 58 - 8458610 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACACAAGTGGGCTTCCAGCAGGTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936138 58 + 75148670 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACACAGGTGGGCTTCCAGCAGGTG i chlSab2.chr16 C 0 I 27 s manLeu1.NW_012106252v1 2175866 58 + 4244037 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACACAGGTGGGCTTCCAGCAGGTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198873 58 + 4569836 GGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGTCACAGTGGTAGGCTGCCAGCAGGTG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868689 58 + 3513951 GGGCTGGCAGCAGGGTGTGCTGCTGCAGCTGGTCACACAGGTGGGCTTCCAGCAGGTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908809 58 + 1920343 GGGCTGGCAGCAGGGTGTGCTGCTGCAGCTGGTCACACAGGTGGGCTTCCAGCAAGTG i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854509 58 + 28711273 TGGCTGGCAGCAGGGTGTGCTGCAGCAGGTGGTCTCACAGGTGGGCTGCCAGCAGGTG i otoGar3.GL873537 I 1 I 15 s mm10.chr11 22126829 43 - 122082543 GGGGTGGCA---------------GCAGCTGGTCACACAGGTTGGTCTCTGGCAGGTG i mm10.chr11 I 1 I 15 s canFam3.chr9 21480136 31 + 61074082 GGGCTTGCAGCAGGTGGTCCTGCAGCAGGTG--------------------------- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 491949 36 - 852752 GAACTGGAGCCATAG----------------------CAGGTGGGCTGGCAGCAGGTG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=115951.000000 s hg38.chr17_JH159148v1_alt 31365 12 + 88070 GTCCTGCAGCAG s panTro5.chr17 16342470 12 + 83181570 GTCCTGCAGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247092 12 + 83442489 GTCCTGCAGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094032 12 + 4267968 GTCCTGCAGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079132 12 - 2193130 GTCCTGCAGCAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136837 12 - 77216781 GTCCTGCAGCAG i rheMac8.chr16 C 0 I 15 s macNem1.NW_012014910v1 2106297 12 + 10377808 GTTCTGCAGCAG i macNem1.NW_012014910v1 C 0 I 15 s cerAty1.NW_012006043v1 1991571 12 - 8458610 GTCCTGCAGCAG i cerAty1.NW_012006043v1 C 0 I 15 s manLeu1.NW_012106252v1 2175924 12 + 4244037 GTCCTGCAGCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198931 12 + 4569836 GTCCTGCAGCAT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868747 12 + 3513951 GTCCTGCAGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1908867 12 + 1920343 GTCCTGCAGCAG i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854582 12 + 28711273 GTCCTGCAGCAG i otoGar3.GL873537 I 15 C 0 s mm10.chr11 22126887 12 - 122082543 GTTCTGTAGCAA i mm10.chr11 I 15 C 0 s canFam3.chr9 21480167 12 + 61074082 GTCCTGCAGCAT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 491985 12 - 852752 GGCTGGCAGCAG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64936196 27 + 75148670 I e macFas5.chr16 28049576 0 - 80997621 C a score=214452.000000 s hg38.chr17_JH159148v1_alt 31377 27 + 88070 GTAGGCTGACAGCAAGGGGAGCAACAG s panTro5.chr17 16342482 27 + 83181570 GTAGGCTGACAGCAAGGGGAGAAACAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247104 27 + 83442489 GTAGGCTGACAGCAAGGGGAGAAACAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094044 27 + 4267968 GTAGGCTGACAGCAAGGGGAGCAACAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079144 27 - 2193130 GTAGGCTGACAGCAAGGGGAGCAGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136864 27 - 77216781 GTAGGCTGACAGCAAGGGGAGCAACAG i rheMac8.chr16 I 15 C 0 s macNem1.NW_012014910v1 2106324 27 + 10377808 GTAGGCTGGCAGCAAGGGGAGCAACAG i macNem1.NW_012014910v1 I 15 C 0 s cerAty1.NW_012006043v1 1991598 27 - 8458610 GTAGGCTGGCAGCAAGGGGAGCAACAG i cerAty1.NW_012006043v1 I 15 C 0 s chlSab2.chr16 64936223 27 + 75148670 GTAGGCTGGCAGCAAGGGGAGCAACAG i chlSab2.chr16 I 27 C 0 s manLeu1.NW_012106252v1 2175936 19 + 4244037 GTGGTCCTGCAGCACGTAG-------- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198943 27 + 4569836 GTAGGCTGGCAGCAAGGGGAGCAACAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868759 27 + 3513951 GTGTTTTGACAGCAAGTTGGGCGGCAG i saiBol1.JH378271 C 0 I 12726 s cebCap1.NW_016107730v1 1908879 27 + 1920343 GTGGTCCTGCAGCACGTAGGCTGGCAG i cebCap1.NW_016107730v1 C 0 I 15 s otoGar3.GL873537 22854594 27 + 28711273 GTGGACTGGCAACAAGGGGAGCAACAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126899 27 - 122082543 CTAGGCTGATAGCAAGAGGAGTAGCAG i mm10.chr11 C 0 I 3 s canFam3.chr9 21480179 26 + 61074082 GTAGGCTGGCAGTAAGGGGAGCAGAA- i canFam3.chr9 C 0 I 4 s dasNov3.JH570468 491997 27 - 852752 GTGGGCTGGCAGCAGGGAGAGCAGCAG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=604099.000000 s hg38.chr17_JH159148v1_alt 31404 82 + 88070 TGGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGACTTCTGTTCAGAGGTGAATTTCCCAGGATCTGATG---ACCCCTTGCCCTCTGGA s panTro5.chr17 16342509 82 + 83181570 TGGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGACTTCTGTTCAGAGGTGAATTTCCCAGGATCTGATG---ACCCCTTGCCCTCTGGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247131 82 + 83442489 TGGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGACTTCTGTTCAGAGGTGAATTTCCCAGGATCTGATG---ACCCCTTGCCCTCTGGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094071 82 + 4267968 TGGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGACTTCTGTTCAGAGGTGAATTTCCCAGGATCTGATG---ACCCCTTGCCATCTGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079171 82 - 2193130 TGGGTCATTGTG--------------------------------------------------TCAGGAGTGAAGGGTGGACTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGATG---ACCCCTTGCAATCTGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136891 82 - 77216781 TTGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106351 82 + 10377808 TTGGTCATGGTG--------------------------------------------------TCAGGGGTGGAAGGTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991625 82 - 8458610 TTGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936250 82 + 75148670 TTGGTCATGGTG--------------------------------------------------TCAGGGGTGGAGGGTGGGTTTCTGATCAGAGGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATTGGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2175955 100 + 4244037 --------GCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT------------------------TCAGAGGTGAATTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2198970 82 + 4569836 TTGGTCATGGTG--------------------------------------------------TCAGGTGTGGAGGGTGGGTTTCTGTTCAGATGTGAGTTTCCCAGAATGTGATG---ACCCCTTGCAATCTGGA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1881512 82 + 3513951 TAAGTCATAGTG--------------------------------------------------TCAGGGGTGGAGGGTGAGTTCCTGTTCAGAGGTGAGTTTCCCAGAATCTGGTG---ACTCCCTCCAATCTGGG i saiBol1.JH378271 I 12726 T 18209 s cebCap1.NW_016107730v1 1908921 82 + 1920343 TGGGTCATGGTG--------------------------------------------------TCAGGGGTGGACGGTGGGCTCCTATTCAGAGGTGAGTTTCCCAGAGTCTGGTG---ACTCCTTCCCATCTGGG i cebCap1.NW_016107730v1 I 15 C 0 s otoGar3.GL873537 22854621 81 + 28711273 TGGGTCATGGTG--------------------------------------------------TC-TGTGTGGAGGGTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGCTG---ATGTCTTCCAATGTGGA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22126929 82 - 122082543 TTGGTAATGGTG--------------------------------------------------TTAGGTGTTGGGGGTGGTGTACTGTTTACAGGTGAGTCTTCTAGAAACCTTTG---ACTTCATTTCAGTTGGG i mm10.chr11 I 3 C 0 s canFam3.chr9 21480209 85 + 61074082 CCAGTCATGCTG--------------------------------------------------TCAGTGGTGGAAGGTGAGCTTCTGTTTTGCGTTGTGGTTTTTAGATTCTGTTACCTATTCCTTCCATTCTGGG i canFam3.chr9 I 4 C 0 s dasNov3.JH570468 492024 76 - 852752 GAAGTCATGGTA--------------------------------------------------TCAG--GTGGAGG--GGGTTCCTTTTCAGAGGTG--TTTCCCAGAATCTGGGG---ACTCCTTAAATGCAGTG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=3301930.000000 s hg38.chr17_JH159148v1_alt 31486 451 + 88070 CCTTTTATACAACTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTATGTTGTTTTCCACAGTCATTT-TG-GTATTGTCAAAGGGGAAGTTGTTTTCTAAAG-GTTATAAATCTTTTGAAAGTAAGGGTTTAATCTG-----TTGCTTAATTGTGGATTACTCATAGAAAC--TATTTCAGATAAAAGGAAG----CCCGTCTCATCATCAGCATTGTTCCTGCTCTGACCATCTTCTGGTGATGTG--ATAGTTCCTGGTGA-CCAGGGAGGCTCAGGA-AGTTCTCTCTACCCAGCCTCATTCTTT-GGTTGTATGTAGGT-------------------------------------TGGCAAGTGTCTGTGGGG----AGAATCATGATTCTGATATGGTCACAAAGACAAAATGAATCCATGCCTATGTTCAAGACTGTTCACCCACCAAAATCTGTTTCAAGA----C--TAA-CAGGCATC--TCTCTCTGTACA s panTro5.chr17 16342591 451 + 83181570 CCTTTTATACATCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTATGTTGTTTTCCACAGTCATTT-TG-GTATTGTCAAAGGGGAAGTTGTTTCCTAAAG-GTTATGAATCTTTTGAAAGTAAGGGTTTAATCTG-----TTGCTTAATTGTGGATTACTCATAGAAACTTTATTTCAGATAAAAGGAAG----CCCGTCTCATCATCAGCATCGTTCCTGCTCTGACCATCTTCTGGTGATGTG--ATAGTTCCTGGTGA-CTGGGGAGGCTCAGGA-AGTTCTCTGTACCCAGCCTCATTCTTT-GGTTGTATGTAGGT-------------------------------------TGGCAAGTGTCTGTGGGG----AGAATCATGATGCTGATATGTTCACAAAGACAAAATGAATCCATGCCGGTGTTCAAGACTGTTCACCCACCAAAATCTGTTTCAAGA----C--TAA-CAGGCA----TCTCTCTGTAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247213 451 + 83442489 CCTTTTATACATCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTATGTTGTTTTCCACAGTCATTT-TG-GTATTGTCAAAGGGGAAGTTGTTTCCTAAAG-GTTATGAATCTTTTGAAAGTAAGGGTTTAATCTG-----TTGCTTAATTGTGGATTACTCATAGAAACTTTATTTCAGATAAAAGGAAG----CCCGTCTCATCATCAGCATCGTTCCTGCTCTGACCATCTTCTGGTGATGTG--ATAGTTCCTGGTGA-CTGGGGAGGCTCAGGA-AGTTCTCTCTACCCAGCCTCATTCTTT-GGTTGTATGTAGGT-------------------------------------TGGCAAGTGTCTGTGGGG----AGAATCATGATGCTGATAGGTTCACAAAGAGAAAATGAATCCATGCCGGTGTTCAAGACTGTTCACCCACCAAAATCTGTTTCAAGA----C--TAA-CAGGCA----TCTCTCTGTAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094153 447 + 4267968 CCTTTTATACATCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACGTTTCCTTGTTGCTGTTTATGTTGTTTTCCACAGTCATTT-TG-GTATTGTCAAAGGGGAAGTTGTTTCCTAAAG-GTTATGAATCTTTTGAAAGTAAGGGTTTAATCTG-----TTGCTTAATTGTGGATTACTCATAGAAACTTTATTTCAGATAAAAGGAGG----CCCGTCTCATCATCAGCATAGTTCCTGCTCTGACCATCTTCTGGTGATGTG--ATAGTTCCTGGTGA-CTGGGGAGGCTCAGGA-AGTTCTCTCTACCCAGCCTCATTCTTT-GGTTGTATGTAGGT-------------------------------------TAGCAAGTGTCTGTGGGG----AGAATCATGATGCTGATATGTTCACAAAGACAAAACA----CATGCCTGTGTTCAAGACTGTTCACCCACCAAAATCTGTTTCAAGA----C--TAA-CAGGCA----TCTCTCTGTACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079253 450 - 2193130 CCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACGTTGTTTCCCACAGTCATTT-TG-GTATTGTCAAAGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTGAAAGTAAAGGTTTAATCTG-----TTGCTTAATTGTAGTTTACTCATAGAAAT-TTGTTTTCGATAAAAGGAAG----CCCATCTCATCATCTGCGTCATTCCTGCTCTGACCATCTTCTGATTATGTG--ATAGTTCCTGGTGA-CCAGGGAGGCTGAGGA-AGTTCTTTCTACCCAGCCTCATTCTTT-GGTTGTATGTCAGT-------------------------------------TGGCAAGTGTATGCAGGG----AGAATCATGATGCTGATATGTTCATGAAGACAAAATGAATCCATGCTCATGCTCAAGACTGTTCAACCACC--AATCTGATTCAAGA----C--TAA-CAGGCATC--TCTCTCTGTACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30136973 452 - 77216781 CCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCTATAGTCAGTC-TG-GGACTGTCAAAGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTGAAAGTAAGGGTTTAATATG-----TCTCTTAATTGT-GTTTACTCATAGAAACTTTGTTTCAGATAAAAGGAAG----CCTGTCTCATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTG--TTTGTTCCTGGTGA-CTGGGGAGGTTCAGGA-AGTTCTCTCTACCCAGCCTCTTTCTTT-GGCTATACCTAGGT-------------------------------------TGGTAAGTGTCTGTGGGG----AGAAGCGCAATGCTGATATGTTCACAATGACAAAATGAATCCATACCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTCAGGA----C--TAA-CAGGCATC--TCTCTCTGTACA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106433 452 + 10377808 CCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCTATAGTCAGTC-TG-GGACTGTCAAAGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTGAAAGTAAGGGTTTAATATG-----TCTCTTAATTGT-GTTTACTCATAGAAACTTTGTTTCAGATAAAAGGAAG----CCTGTCTCATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTG--TTTGTTCCTGGTGA-CTGGGGAGGTTCAGGA-AGTTCTCTCTACCCAGCCTCTTTCTTT-GGCTATACCTAGGT-------------------------------------TGGTAAGTGTCTGTGGGG----AGAAGCGCAATGCTGATATGTTCACAATGACAAAATGAATCCATACCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTCAAGA----C--TAA-CAGGCATC--TCTCTCTGTACA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1991707 452 - 8458610 CCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACGTTGTTTTCTATAGTCAGTC-TG-GGACTGTCAAAGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTGAAAGTAAGGGTTTAATATG-----TCTCTTAATTGT-GTTTACTCATAGAAACTTTGTTTCAGATAAAAGGAAG----CCTGTCTCATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTG--TTTGTTCCTGGTGA-CTGGGGAGGTTCAGGA-AGTTCTCTCTACCTAGCCTCTTTCTTT-GGCTATACCTAGGT-------------------------------------TGGTAAGTGTCTTTGGGG----AGAAGTGCAATGCTGATATGTTCACAATGACAGAATGAATCCATACCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTCAAGA----C--TAA-CAGGCATC--TCTCTCTGTACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936332 452 + 75148670 CCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCTATAGTCAGTT-TG-GGACTGTCAAAGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTTAAAGTAAGGGTTTAATATG-----TCTCTTAATTGT-GTTTACTCATAGAAACTTTGTTTCAGATAAAAGGAAA----CCTGTCTCATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTG--TTTGTTCCTGGTGA-CTGGGGAGGTTCAGGA-AGTTCTCTCTACCTAGCCTCTTTCTTT-GGCTATACCTAGGT-------------------------------------TGGTAAGTGTCTGTGGGG----AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCTACCGAAGTTTGATTCAAGG----T--TAA-CAGGCATC--TCTCTATGTACG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2176055 452 + 4244037 CCTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCTATAGTCAGTC-TG-GGACTGTCAAAGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTGAAAGTAAGGGTTTAATATG-----TCTCTTAATTGT-GTTTACTCATAGAAACTTTGTTTCAGATAAAAGGAAG----CCTGTCTCATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTG--TTTGTTCCTGGTGA-CTGGGGAGGTTCAGGA-AGTTCTCTCTACCTAGCCTCTTTCTTT-GGCTATACCTAGGT-------------------------------------TGGTAAGTGTCTGTGGGG----AGAAGTGCGATGCTGATATGTTCACAATGACAGAATGAATCCATACCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTCAAGA----C--TAA-CAGGCATC--TCTCTCTGTACA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199052 452 + 4569836 CGTTTTATACACCTGGCCTCC-AAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCTATAGTCAGTA-TG-AGACTGTCAAGGGGGAAGTTGTTTCCTAAAG-ATTATGAATCTTTTGAAAGTAAGGGTTTAATATG-----TCTCTTAATTGT-GTTTACTCATAGAAACTTTGTTTCAGATAAAAGGAAG----CCTATCTCATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTG--TTAGTTCCTGGTGA-CTGGGGAGGTTCAGGA-AGTTCTCTCTACCCAACCTCTTTCTTT-GGCTATACATAGGT-------------------------------------TGGTAAGTGTCTGTGGGG----AGAAGTGCGATGCTGATATGTTCACAATGACAAAATGAATCCATGCCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTCTAGA----C--TAA-CAGGCATC--TCTCTCTGTACA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1863385 447 + 3513951 CCTTTTATACATCGGGCCTCC-AACGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCCACAGTCCGTT-TG-GGATTGTCAAAGGGGAAGTTGTTTCTGAAAT-CTTATGAATCTTTTGAAGGTAAGGGTTTAATCTG-----TTTCTTAATCGTGAATTACTCACAGAATCTTTCTTTCAGATAAAAGGAAG----CCCGTGTCATCATCAGCATGATTCCTGCTCTGACCGTCTTCTGGTCATGTG--ATAGTTCCTGGTGA-CTGGGGAGACTC---A-AGTTCTCTCTGCC-AACCTCCTTCTTT-GGCTGTATGTAGAT-------------------------------------TGGGAAGTGTCTGCAGGG----AAAAGTGTGATGCTTATATTTTTACAGTGACCAAAGAAACCCATGTGTGCGCCCAAAACTGCTCAGCCACCAAAGTCTGATTCAAGG----C--TAA-CAGGCA----TCTCTCTGTAGA i saiBol1.JH378271 T 18209 C 0 s cebCap1.NW_016107730v1 1909003 447 + 1920343 CATTTTATACATCTGGCCTCC-GAAGTTCCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTACATTGTTTTCCACAGTCCTTT-TG-GGATTGTCAAAGGGAAAGTTGTTTTTGAAAT-CTTATGAATCTTCTGAAAGCAAGGGTTTAATCTG-----TTTCTTAATTGTGAATTACTCACAGAAACTTTGTTTCAGATAAAAGGAAG----CCCGTGCCATCATCAGCATGGTTCCTGCTCTGACCATCTTCTGGTCATGTG--ATAGTTCCTGGTGA-CTGAGGAGGCTC---A-AGTTCTCTCTACC-AACCTCCTTCCTT-GGCTGTATGTAGAT-------------------------------------TGGGAAGTGTCTGCGGGG----AAAAGTGTGATGCTCACATTTTTACAGTGACCAAAGGAACCCATGTCTGTGCCCAAAACTGCTCAGCCACCAAAGTCTGATTCAAGT----C--TAA-CAGGCA----TCTCCCTGTAGA i cebCap1.NW_016107730v1 C 0 C 0 s otoGar3.GL873537 22854702 454 + 28711273 CCTTTTATACACGGGGCCTCC-AAAGTTTGGACCAATGGACAGAATTTTTCCTTATTATTGTTGACACTGTTTTCCATAATTACCAGCT-GAATTAAGAAGGAGGAAGTTGTTTCCTAAGG-GTTAAAACTCTTTCAATAGTAAGTGTTTAATCTG-----TTTCTTAATTGAGAATCACTCATTGAAAC-TTCTTTCAGGTAAAAGGAAG----GTGCTCACATCATCAGCATCGTTCCTGCTCTGGTCACCATCTGCTCATGTG--CTAGTTCCTG----------------------------------TCCACCTCTTCCTGT-GGCTGTGTGCAGTCCATTAGAAAAAGGATGATAGTAACAAAATAATAAACATGGGATGCATTTGTGGGA----AGGAGCTTGGTGCTAATATGTTCACAGTGATGAATTGAATGCATGCCTGGGTCCAAGTCTCTTCACCCACAACAGCCCAATTCAAGA----C--TAA-CAGGAA------TCTCTGTACA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22127011 441 - 122082543 TCTTTTATACATCAGCTCATC-CAGGTTTGGACCAATGA-CAG---TTTTCCTTCTTC---TTTACACTGCTTTCCATATTAAAAG-TT-TATTTATCAAAGAAGAAGTTGTTCCTTAG-----TAGGAATCTTTTAAAAT---GTATTTAATTTGTTTGTTTTCTTTTCTGGGAGTAACTCACAAGACCTT--TTTCAGATAAAAGGAAAGAGTCACGTGT-ACCATCAACCTCATCACAGCTCAGAGTATCTTGTGGTAATGGG--TTTGCGCCTCAAGG-CAGAGAGGGTAGGGAG-AGTGTTGCTTCTATAGCGTTCTTCCTT-TGTTTGGCTTTGAT-------------------------------------TGGGAGGTAGCTATGGAG----AAGGATGAGAGAGTGCTATGCTCACATCAATTAGCTGA----ATGCCTAGCTCCTTGTCTGTTCATCTAC-AAAACCTACCTCCAGA----T--GGGTCAGGAGTG--TGCTTTTGTACC i mm10.chr11 C 0 C 0 s canFam3.chr9 21480294 459 + 61074082 GCTTTTATACACTGGACCTCCTGACATTTGGACCAATGGGCACGACG-TTCCTTGTTGTTGTTTAAATAATTTTCAATAATCACTGAGG-GAAGTGTAAAAGAGGAAGTTGTT-CCGAAAT-GTTATGAATCCTTAGGAAATAATTGCTT-ATTTG-----CTTCTTAATTGAGAATAACTCATAGAAACAT--TCTCAGAAGGAAGGAAG----GTGGTCACATCAGCAGCCTTGTTCTTGCTTCAGGGACCATGGGATCATGTGCTCTAGTTTCTGCTGG-CCTGAGGAGTGTCAGC-AGTGGTCCTTCCCCAGCTCTGGTCTCTGGGTTGTCTGTAGAT---------------------------------------GGAAATGTCCCTGGGGGAGTGGGGACATGAGGTCCCTCTGTTCACAGGGAGCACCGGAATCCATGCCTGAGCCCAAGTCAGTCTCCCCAC-AAAGCCTGATGGGAGACACCC--TGA-T-GGCATCTGCTTCTTGGAGCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492100 440 - 852752 TCTTTTATACCCTGGGCCCCC-AATCTTT-GACCAATCAGCAGGTCTTTTCCTTATTATTG---ACATGGTTTTCCGTAGATAATA-GGCAAATTACCAAGGAAGATGTTTTTCCCCGAAGTATTATGAATTTTTCAAA-----GTATTTAATCAT-----TTTCTTAATTG--AGCTATGTATAGAAAC-TTCTCACAGTTATGAGAAAG----GTGGTCATATCCTCAGCATCATTCCTG-TCCCATCATCATCT-GTCATGTG--ATAGTTCCTGGTGGCCTAGGGAGGCTCTTTACAGTTGTTGCTCCCCAGCTTGGTTCTTTTGGCTGTACGTAGAT-------------------------------------TGGCAAGTACACCTCAGG----GAGTGCATGAT-CTGATATGCTCCCAGTGACAAATTAGATCCCTGCCGGCGTCCAATTTTGTTCAACCACAGAAGACCGATTCCAGG----CTATAA-CAGGCATT--TATTTTC----- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022338 1146 - 7032639 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=498004.000000 s hg38.chr17_JH159148v1_alt 31937 59 + 88070 ACCCACACCACCTGTGTCTTTCACCTCCATCAAAGTCACTTGGGAAAAGGGTGATTGGT s panTro5.chr17 16343042 59 + 83181570 ACCCACACCACCTGTGTCTTTCAGCTTCATCAAAGTCACTTGGGAAAAGGGTGATTGGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247664 59 + 83442489 ACCCACACCACCTGTGTCTTTCAGCTTCATCAAAGTCACTTGGGAAAAGGGTGATTGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094600 59 + 4267968 ACCCACACCACAGGTGTCTTTCAGCTTCATCAAAGTCACTTGGGAAAAGGGTGATTGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079703 59 - 2193130 ACCCACACCACCTGTGTCTTTCAGCTCCATCAAAGTCACTTGGGAAAAGGGTGATTGGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137425 59 - 77216781 ACCCACACCACCTGCGTCTTTCAGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGT i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106885 59 + 10377808 ACCCACACCACCTGTGTCTTTCAGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992159 59 - 8458610 ACCCACACCACCTGTGTCTTTCGGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936784 59 + 75148670 ACCTACTTTACCTGTCTCTTCCAGTTCTACAAAAGCCACTTGGGAAGAGGGTGTTCGGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2176507 59 + 4244037 ACCCACACCACCTGTGTCTTTCAGTTCCCTCAAAGTCACTTGAGAAGAGGGTGATTGGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199504 59 + 4569836 ACCCACACCACCTGTGTCTTTCAGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1863832 59 + 3513951 ACACACACCACCTGTGTCTTTCAGTTCCATCAAAATCACTTGGGAAGAGGGTGTTTGGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909450 59 + 1920343 ACACACACCACCTGTGTCTTTCAGTTCCACCAAAATCACTTGGGAAGAGGGTGTTTGGC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7023484 59 - 7032639 ACACACACCACCTGTGTCTTTCAGTTCCATCAAAATCACTTGGGAAGAGGGTGTTTGGC i aotNan1.NW_018502359v1 I 1146 C 0 s otoGar3.GL873537 22855156 58 + 28711273 ACCTACTCTTCTTGTGTCTCCTGGTTCTGTCAAAAACA-GCAGGAGGTGGGTGCTTGGC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22127452 56 - 122082543 ---GGCTCTACTACTGGGTACCACTTGTGTCAAGTACACTTGGGGACATGGTATTCGGt i mm10.chr11 C 0 I 7088 s canFam3.chr9 21480753 58 + 61074082 CCCTACCCCATCTGCATATCCCAATTCCATCAAGGAC-CTTGGCCCAACGATGTCTGGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492540 30 - 852752 -----------------------------TCAAAGATATTTGGGTAGAGGATGTTTGGC i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=256319.000000 s hg38.chr17_JH159148v1_alt 31996 36 + 88070 ACAGTGTGTTCTATGTGTCAGAGCAGAACCAGAGCA s panTro5.chr17 16343101 36 + 83181570 ACAGTGTGTTCTATGTGGCAGAGCAGAACCAGAGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247723 36 + 83442489 ACAGTGTGTTCTATGTGGCAGAGCAGAACCAGAGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094659 36 + 4267968 ACAGTGTGTTCTATGTGGCGGAGCAGAACCAGAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079762 36 - 2193130 AGAGTGTGTTCTATGTGGCAGAGCAGAACCAAAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137484 35 - 77216781 AC-GTGCATTCTGTGTGTCAGAGCAGAATCAAAGCA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106944 35 + 10377808 AC-GTGCATTCTGTGTGTCAGGGCAGAATCAAAGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992218 35 - 8458610 AC-GTGCATTCTGTGTATCAGAGCAGAATCAAAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936843 36 + 75148670 ACAATGTGTTCCATGTGGCAGAGCAGAGCCAAAGCA i chlSab2.chr16 C 0 I 30657 s manLeu1.NW_012106252v1 2176566 35 + 4244037 AC-GTGCATTCTGTGTGTCAGAGCAGAATCAAAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199563 35 + 4569836 AT-GTGCTTTCTGTGTGTCAGAGCAGAATCGAAGCA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1863891 36 + 3513951 ACAGTGTGTTCTATGTGGCAGAGCAGAATCAAAGTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909509 36 + 1920343 ACCGTGTGTTCTATGTGGCAGAGAAGAATTGAAGCA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7023543 36 - 7032639 ACAGTGTGTTCTATGTGACAGAGCAGAATGGAAGTA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855214 25 + 28711273 ATGGGGTGTTTGATATGGCAGAGCA----------- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134596 34 - 122082543 ACCATATGCTCCATAT--CAGGGTAGACTTAGAGGA i mm10.chr11 I 7088 I 4 s canFam3.chr9 21480811 36 + 61074082 ATCTTATCTTCCAAATGGCTAGGCAGAACCGAAGCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492570 36 - 852752 ATAATCTCTTCCACATGGCAAATCAAAAACAAAACA i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=262914.000000 s hg38.chr17_JH159148v1_alt 32032 37 + 88070 GGTGGGTACGAGGAGAAGTCC-AGTGGGATTTAGATAG s panTro5.chr17 16343137 34 + 83181570 GGTGGGTAC---GAGAAGTCC-AGTGGGATTTAGATAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247759 34 + 83442489 GATGGGTAC---GAGAAGTCC-AGTGGGATTTAGATAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094695 37 + 4267968 GGTGGGTACGAGGAGAAGTCC-AGTGGGATTTAGATAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079798 37 - 2193130 GGTGGGTACAAGGAGAAGTCC-AGTGGGCTTTAGATAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137519 37 - 77216781 GGTGGGTACAAGGAGAAGTCC-AGTGGGATTTAGATAG i rheMac8.chr16 C 0 T 2247 s macNem1.NW_012014910v1 2106979 37 + 10377808 GGTGGGTACAAGGAGAAGTCC-AGTGGGATTTAGATAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992253 37 - 8458610 GGTGGGTACAAGGAGAAGTCC-AGTGGGATTTAGATAG i cerAty1.NW_012006043v1 C 0 I 180 s chlSab2.chr16 64967536 35 + 75148670 AGTGGATGCA--GAGAATTCC-ACTGGGATTTAGAGAG i chlSab2.chr16 I 30657 C 0 s manLeu1.NW_012106252v1 2176601 37 + 4244037 GGTGGGTACAAGGAGAAGTCC-AGTGGGATTTAGATAG i manLeu1.NW_012106252v1 C 0 I 176 s colAng1.NW_012122154v1 2199598 34 + 4569836 GGTGGGTACA---AGAAGTCC-AGTGGGATTTAGATAG i colAng1.NW_012122154v1 C 0 I 180 s saiBol1.JH378271 1863927 37 + 3513951 GGTGGGTACAAAAAGAAGTCA-ACTGGGACTTAGACAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909545 37 + 1920343 GGTGGGAACAAGGAGAAGTCC-ACTGGGATTCAGATAG i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7023579 37 - 7032639 GATGGGTACAAAGAGAAGTCC-GCTGGGATTTAGATAG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855239 33 + 28711273 ----GGTGCAGAGAAAGGTGC-ATGAGGATTCAGAAAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134634 35 - 122082543 TATGGGCATGGTAACATGTCAGAATGAGA---AGATAC i mm10.chr11 I 4 I 2 s canFam3.chr9 21480847 32 + 61074082 GGTGGGCA-----AAAGCTGC-AACAGCACACAGGGAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492606 37 - 852752 AGTGGCTAGAAGAAGAATTAC-CCTGGAATTCACAACG i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C a score=189808.000000 s hg38.chr17_JH159148v1_alt 32069 45 + 88070 CATCAGGCAATCTTTGCCCtgggttgacca--ttcattctgatttgt s panTro5.chr17 16343171 45 + 83181570 CATCAGGCAATCTTTGCCCTGGGTTGACCA--TTCATCCTGATTTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247793 45 + 83442489 CATCAGGCAATCTTTGCCCtgggttgacca--ttcatcctgatttgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094732 45 + 4267968 CATCAGGCAATCTTTGCCCTGAGTtgacca--ttcattctgatttgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079835 45 - 2193130 CATCAGGCAATCTTTGCCCtggggtgacca--ttcatcctgatttgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107016 45 + 10377808 CATCAGGCAATCTTTGCCCtggggtgacca--ttcatcttgatttgt i macNem1.NW_012014910v1 C 0 C 0 s chlSab2.chr16 64967571 45 + 75148670 CATAAAGCAATCTATCCCCTGGGGCGACCA--TTCGTTCTGACTTAC i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1863964 45 + 3513951 CATCAAGCAAAATTTGCCCtggggtgacca--gtcatcctgatttgt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909582 45 + 1920343 CATCAAGCACTCTTTGCCCtggggtgacca--ttcatcctgatttgc i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7023616 45 - 7032639 CGTCAAGCAATCTTTGCCCtggggtgacca--ttcatcctgctttgt i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855272 45 + 28711273 CATCAAGCAGTCTATTTCCTGgggtgacca--tgaatcctggtttgc i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134671 37 - 122082543 AAGCATGCAG----------GAGTTCACTGTTTTTTTCCTGATCTTT i mm10.chr11 I 2 I 51 s canFam3.chr9 21480879 40 + 61074082 ----AAGCAATTATCAACCTGTg-tgacca--gtggtcttgatttag i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492643 39 - 852752 ----TTTCAATTAACACCCTGGGGT--TCT--GCCATCCTTGTTTCC i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2176638 176 + 4244037 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2199632 180 + 4569836 I e cerAty1.NW_012006043v1 1992290 180 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=371139.000000 s hg38.chr17_JH159148v1_alt 32114 117 + 88070 ctgggagagaggggcttaccataatgaaaatgtgggactttgtgtaacataagtgctttagactcaggcaagccagcatgagct-g-TGGCTCTAGCCCTAACTCTGG-TAGTAGCATAG s panTro5.chr17 16343216 117 + 83181570 CTGGGAGAGAGGGGCTTACCAGAATGAAAATGTTGGACTTTGTGTAACATAAGTGCTTTAGACTCAGGCAagccagcatgagct-g-tggctctagccctaactgtgg-tactagcatag i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247838 117 + 83442489 ctgggagagaggggcttaccagaatgaaaatgtgggactttgtgtaacataagtgctttagactcaggcaagccagcatgagct-g-TGGCTCTAGCCCTAACTGTGG-TACTAGCATAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094777 117 + 4267968 ctgggagagaggggcttaccagaatgaaaatgtgggactttgtgtaacataagtgctttagactcaggcaagccagcatgagct-g-TGGCTCTAGCCCTAACTCTGG-TACTAGCATAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079880 117 - 2193130 cggggagtgaggggcttaccagaatgaaaatgtgggactttctgtaacataagtgctttagattcaggcaaaccagcactagct-g-TGGATCTAGCCCTAACTGTCG-TACTAGCATAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107061 117 + 10377808 ctgggagtgatgggcttaccaggatgagaatgtgggactttGTGTAACATAACTACTTTAGATTTAGTCAAACCAGCCTGAATT-G-TGGCTCTAGCCCTAACTCTGG-TACTAGCATAG i macNem1.NW_012014910v1 C 0 C 0 s chlSab2.chr16 64967616 118 + 75148670 CTGTGAGTGTGGTGATTACCAGGATGAGAATGTAGGACTTTCTATCACGTAACTGGTTGAGATTCAGACCAACCAGCATGTGCT-G-TGGCTCTAGCCTTAAACCTAGTTACTAGCACAG i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1864009 117 + 3513951 ctgggagtgaggggcttaccaggaatagaatgtaggactttctatgacataactgctttagattcaggccaaccagcatgagCC-G-TGGCTC-AGCTGTAAGCCTGGTTACCAGGACAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909627 117 + 1920343 ctgggagtgaggggcttaccaggaatagaatgtaggactttctatgacataactgctttagattcagaccaaccagcatgagca-g-tggctc-agccctaAGCCTGGTTACCAGCACAG i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7023661 117 - 7032639 ctgggagtgaggggcttaccaggaatagaatgtaggactttctatgacataactgCTTTAGATTGAGGCCAACCTGCATGAGCG-G-TGGCTC-AGCCCTAAGCCTGGTTACCAGCACAG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855317 112 + 28711273 ccaggactgaggggtttcctcgg------atgtgggactttcagtaattt-actaggacagttgtggagaagctgagatgaatc-gatgactctaATCCTAACCCTGCTCACCAGCAGAG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21480919 108 + 61074082 tcagaattgtgggctttcccagc------atgtggatctttcactgatat-gctggggta-atttgggcaaagcacaatgaCCTCA-TGACTC-AACCCTAACTCAT--TTTTAACATAT i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 492682 107 - 852752 CCCAGGGCTCTGGGTTCCCCACA------ATGTGGGGCTTTGGTGATCATACTTGGACTGG-TTCAGGCAACCCAG-ATGAGAT-T-CCAGTCTAGTCCTGACCTGAG-TCCTACCGC-- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22134708 51 - 122082543 I e manLeu1.NW_012106252v1 2176638 176 + 4244037 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2199632 180 + 4569836 I e cerAty1.NW_012006043v1 1992290 180 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=29276.000000 s hg38.chr17_JH159148v1_alt 32231 15 + 88070 TCAG--------------------TGCCATTTCTT-- s panTro5.chr17 16343333 15 + 83181570 tcag--------------------tgccatgtctt-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247955 15 + 83442489 TCAG--------------------TGCCATGTCTT-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094894 15 + 4267968 TCAG--------------------TGCCATTTCTT-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2079997 15 - 2193130 TCAG--------------------TGCCATTTCTT-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107178 15 + 10377808 TCAG--------------------TGCCATTTCTT-- i macNem1.NW_012014910v1 C 0 C 0 s chlSab2.chr16 64967734 14 + 75148670 TTAG--------------------CGTCATCTCT--- i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1864126 15 + 3513951 TCAG--------------------CGCCATTTCTT-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909744 15 + 1920343 TCAG--------------------TGCCATTTCTT-- i cebCap1.NW_016107730v1 C 0 I 13 s aotNan1.NW_018502359v1 7023778 13 - 7032639 TCAG--------------------TGCCATTTC---- i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855429 35 + 28711273 TCAGAGGTTTCAGGACACTGACTATGCATtttcct-- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134759 15 - 122082543 TCAT--------------------TTTGCTATCCT-- i mm10.chr11 I 51 C 0 s canFam3.chr9 21481030 15 + 61074082 TTTA--------------------CTTCACGTATG-- i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 492789 15 - 852752 TCAG--------------------TA--ACCTCATGG i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2176638 176 + 4244037 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2199632 180 + 4569836 I e cerAty1.NW_012006043v1 1992290 180 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=1158.000000 s hg38.chr17_JH159148v1_alt 32246 3 + 88070 --TTC s panTro5.chr17 16343348 3 + 83181570 --ctc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247970 3 + 83442489 --CTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094909 3 + 4267968 --CTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080012 3 - 2193130 --CTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107193 3 + 10377808 --CTC i macNem1.NW_012014910v1 C 0 C 0 s otoGar3.GL873537 22855464 3 + 28711273 --ttt i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134774 3 - 122082543 --TTC i mm10.chr11 C 0 C 0 s canFam3.chr9 21481045 3 + 61074082 --CAC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492804 3 - 852752 GAC-- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7023791 0 - 7032639 C e cebCap1.NW_016107730v1 1909759 13 + 1920343 I e manLeu1.NW_012106252v1 2176638 176 + 4244037 I e saiBol1.JH378271 1864141 0 + 3513951 C e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2199632 180 + 4569836 I e chlSab2.chr16 64967748 0 + 75148670 C e cerAty1.NW_012006043v1 1992290 180 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=5081.000000 s hg38.chr17_JH159148v1_alt 32249 4 + 88070 TCTA s panTro5.chr17 16343351 4 + 83181570 tcta i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247973 4 + 83442489 TCTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094912 4 + 4267968 TATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080015 4 - 2193130 TATG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s manLeu1.NW_012106252v1 2176814 4 + 4244037 TCTG i manLeu1.NW_012106252v1 I 176 C 0 s otoGar3.GL873537 22855467 4 + 28711273 tctc i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134777 4 - 122082543 TCTA i mm10.chr11 C 0 I 3 s canFam3.chr9 21481048 4 + 61074082 TATG i canFam3.chr9 C 0 I 4 s dasNov3.JH570468 492807 4 - 852752 TCAC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7023791 0 - 7032639 C e cebCap1.NW_016107730v1 1909759 13 + 1920343 I e saiBol1.JH378271 1864141 0 + 3513951 C e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2199632 180 + 4569836 I e chlSab2.chr16 64967748 0 + 75148670 C e cerAty1.NW_012006043v1 1992290 180 - 8458610 I e macNem1.NW_012014910v1 2107196 0 + 10377808 C e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=40659.000000 s hg38.chr17_JH159148v1_alt 32253 13 + 88070 -------TCTTTCTCCATTT- s panTro5.chr17 16343355 13 + 83181570 -------tctttctccattt- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247977 13 + 83442489 -------TCTTTCTCCATTT- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094916 13 + 4267968 -------TCTTTCTCCATTT- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080019 13 - 2193130 -------TCTTTCTCCATTT- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107196 13 + 10377808 -------TCTTTCTCCATTT- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992470 13 - 8458610 -------TCTTTCTCCATTT- i cerAty1.NW_012006043v1 I 180 C 0 s chlSab2.chr16 64967748 11 + 75148670 ---------TCTCTCCATTT- i chlSab2.chr16 C 0 T 30604 s manLeu1.NW_012106252v1 2176818 13 + 4244037 -------TCTTTCTCCATTT- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199812 13 + 4569836 -------TCTTTCTCCATTT- i colAng1.NW_012122154v1 I 180 C 0 s saiBol1.JH378271 1864141 8 + 3513951 ------------CTGTATTT- i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7023791 10 - 7032639 ----------TTCTGTATTT- i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855471 13 + 28711273 -------actcccctccttc- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134784 13 - 122082543 -------TCTTTCTCAGTTG- i mm10.chr11 I 3 C 0 s canFam3.chr9 21481056 10 + 61074082 -------GTTTTCTCCT---- i canFam3.chr9 I 4 I 1 s dasNov3.JH570468 492811 21 - 852752 CCGCACCCCAACCTGCACTTT i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1909759 13 + 1920343 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=7397.000000 s hg38.chr17_JH159148v1_alt 32266 1 + 88070 C s panTro5.chr17 16343368 1 + 83181570 c i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247990 1 + 83442489 C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094929 1 + 4267968 C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080032 1 - 2193130 C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107209 1 + 10377808 C i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992483 1 - 8458610 C i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2176831 1 + 4244037 C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199825 1 + 4569836 C i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864149 1 + 3513951 C i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7023801 1 - 7032639 C i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855484 1 + 28711273 t i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134797 1 - 122082543 C i mm10.chr11 C 0 I 1 s dasNov3.JH570468 492832 1 - 852752 C i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1909759 13 + 1920343 I e canFam3.chr9 21481066 1 + 61074082 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64967759 30604 + 75148670 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=24495.000000 s hg38.chr17_JH159148v1_alt 32267 3 + 88070 -TTT s panTro5.chr17 16343369 3 + 83181570 -ttt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247991 3 + 83442489 -TTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094930 3 + 4267968 -TTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080033 3 - 2193130 -TTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107210 3 + 10377808 -TTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992484 3 - 8458610 -TTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937155 3 + 75148670 -TTT i chlSab2.chr16 T 30604 C 0 s manLeu1.NW_012106252v1 2176832 3 + 4244037 -TTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199826 3 + 4569836 -TTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864150 3 + 3513951 -TTT i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7023802 3 - 7032639 -TTT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22855485 3 + 28711273 -ttt i otoGar3.GL873537 C 0 I 6242 s mm10.chr11 22134799 3 - 122082543 -TTT i mm10.chr11 I 1 I 3 s canFam3.chr9 21481067 3 + 61074082 -TTT i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 492833 3 - 852752 ATT- i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1909759 13 + 1920343 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=3162.000000 s hg38.chr17_JH159148v1_alt 32270 2 + 88070 TT s panTro5.chr17 16343372 2 + 83181570 tt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247994 2 + 83442489 TT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094933 2 + 4267968 TT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080036 2 - 2193130 TT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107213 2 + 10377808 TT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992487 2 - 8458610 TT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937158 2 + 75148670 TC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2176835 2 + 4244037 TT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199829 2 + 4569836 TT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864153 1 + 3513951 T- i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7023805 1 - 7032639 T- i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861730 2 + 28711273 TC i otoGar3.GL873537 I 6242 C 0 s mm10.chr11 22134805 2 - 122082543 TC i mm10.chr11 I 3 I 5 s canFam3.chr9 21481070 2 + 61074082 TT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492836 2 - 852752 TT i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107730v1 1909759 13 + 1920343 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=1266795.000000 s hg38.chr17_JH159148v1_alt 32272 212 + 88070 AATGAAGAAAT-TAGATGAGTTGAGATGATAGCTGATTCGTCTTGGAGTTCTAACATATT-AAAACATTTTTTA---GGTATACCATTCATTTCAGAAGAA-TGCAAATT-AT-TAATTTCCAACTTGTTATA-----ACTTT-----GTAAATAAAGCTATGTCCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCCCTTTAAATTATATTCCT--TTACTCATC s panTro5.chr17 16343374 211 + 83181570 aatgaaggaat-tagatgatttgagatgatagctgatgtgtcttggagttctaacatatt-aagac-tttTTTA---GGTATACCATTCTTTTCAGAAGAA-TGTAAATT-AT-TAATTTCCAACTTGTTATA-----ACTTT-----GTAAATACAGCTATGTCCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCCCTTTAAATTATATTCCC--TTACTCATC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16247996 212 + 83442489 AATGAAGGAAT-TAGATGATTTGAGATGATAGCTGATGTGTCTTGGAGTTCTAACATATT-AAAACATTTTTTA---GGTATACCATTCATTTCAGAAGAA-TGTAAATT-AT-TAATTTCCAACTTGTTATA-----ACTTT-----GTAAATACAGCTATGTCCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCCCTTTAAATTATATTCCC--TTACTCATC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4094935 211 + 4267968 AATGAAGGAAT-TAGATGATTTGAGATGATAGCTGATTCGTCTTGGAGTTCTAACATATT-AAAAC-ATTTTTA---GGTATACCATTCATTTCAGAAGAA-TGCAAATT-AT-TAATTTCCAACTTGTTATA-----ACTTT-----GTAAATACAGCTATGTCCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCCCTTTAAATTATATTCAC--TTACTCATC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080038 212 - 2193130 AATGAAGGAAT-TAGATGAGTTGAGATGATAGCTGATTCGTCTTGGAGTTCTAACATATT-AAAGCATTTTTTA---GGTACACCATTCATTTCGGAAGAA-TGCCAATT-AT-TAATTTCCAACTTGATATA-----ATTTT-----GTTAATACATCTATGCTCCCATTATCAGGTTAGGAAATAGAAATTAATCCAATTCCCTTTAAATTATATTCCT--TTACTCATC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107215 202 + 10377808 AATGAAGGAAT-TAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCCAACATATT-AAAACATTGTTTA---GGTGCACCATTCATTTTGGAAGAA-TGCAAATT-AT-TAATTCCCAATTTGATATA-----ACTTT-----GTAAATACATCTATGTTCCCATTACTGGGTTATGAAATAGAAATTAATCCCATTCCCTTTCAG------------TTACTCATC i macNem1.NW_012014910v1 C 0 I 1 s cerAty1.NW_012006043v1 1992489 202 - 8458610 AATGAAGGAAT-TAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCTAACATATT-AAAACATTGTTTA---GGTGCACCATTCATTTTGGAAGAA-TGCAAATT-AT-TAATTCCCAATTTGATATA-----ACTTT-----GTAAATACATCTATGTTCCCATTACCGGGTTACGAAATAGAAATTAATCCCATTCCCTTTCAG------------TTACTCATC i cerAty1.NW_012006043v1 C 0 I 1 s chlSab2.chr16 64937160 217 + 75148670 AATGAGGGAAT-TAGATGCGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCGTGTT-TAAAACTTTTTAA---ATTATACCATTCATTTCAGAAGAA-TGCAAATT-AT-TAATTTCCAGCTTGATACAATATTACATT-----GTAAATACATCTAAGTCCCCATGACCAGTTTACAAAACAGAAATTAATTCCATTCCATCCAAATTATATCTTT--TTACTCATC i chlSab2.chr16 C 0 I 11654 s manLeu1.NW_012106252v1 2176837 202 + 4244037 AATGAAGGAAT-TAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCTAACATATT-AAAACATTGTTTA---GATGCACCATTCATTTTGGAAGAA-TGCAAATT-AT-TAATTCCCAATTTGATATA-----ACTTT-----GTAAATACATCTATGTTCCCATTACCGGGTTACGAAATAGAAATTAATCCCATTCCCTTTCAG------------TTACTCATC i manLeu1.NW_012106252v1 C 0 I 1 s colAng1.NW_012122154v1 2199831 202 + 4569836 AATGAAGGAAT-TAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCTAATATATT-AAAACATTGTTTA---GAAGCACCATTCATTTTGGAAGAA-TGCAAATT-AT-TAATTCCCAATTTGATATA-----ACTTT-----GTAAATACATCTATGTTCCCATTAGCGGGTTACGAAATAGAAATTAATCCCATTCCCTTTCAG------------TTACTCATC i colAng1.NW_012122154v1 C 0 I 1 s saiBol1.JH378271 1864154 212 + 3513951 AATGCAGGAAT-TAGGTGAGTTGAGATGACCCCTGATTCGTCTTGGAGTTCCAACATATT-TAAACATTTTTGA---GGTACACAATTTATTTAGGAAGAA-TGCAAATT-AT-GAATTTCCAACTTAAGATA-----ACTTT-----GTAAATACATCTTTGATCCCATTACCAGGTTAGGAAACAGAAATTAATCCCATTGCCTTTAGATTATATTCTC--TTACTCATT i saiBol1.JH378271 C 0 I 2 s cebCap1.NW_016107730v1 1909772 212 + 1920343 AATGAAGGAAT-TAGGTGAGTTGAGATGACACCTGATTCATCTTGGAGTTCCAACATATT-TAAACAGTTTTTA---GGTACACAATTCATTTAGGAAGAA-TGCAAATT-AT-GAATTTCCAACTTGAGATA-----ACCTC-----GTAAATACATCTGTGATTCCATTACCAGGTTACGAAACAGAAATTAATCCCATTGCCTTTAGATTATATTCTC--TGACTCATT i cebCap1.NW_016107730v1 I 13 I 2 s aotNan1.NW_018502359v1 7023806 212 - 7032639 AATGAAGGAAT-TAGGTGAGTTGAGAATACATCTAATTCTTTTTGGAATTTTAACATATT-TATACATTTTTCA---GGTACACAATTCATTTAGGAAGAA-TGCAAATT-AT-GAATTTCCAACTTGAGATA-----ACTTT-----GTAAATACATCTGTGATCCCACTACCAGGTTAGGAAACAGAAATTAATCCCATTCCCTTTAGATTATATTCTC--TTACTCATT i aotNan1.NW_018502359v1 C 0 I 2 s otoGar3.GL873537 22861732 218 + 28711273 AATGAGGGAAT-TAGATTAGTTGCAGTGATACCTGATTTGCCTTTGTGATCTAACATATT---AACATTTTGGGGGTGGTATACCACTTTTTAAAAAAGAAGCGCAAATTAAC-TAATTTCCAGCTATAGAGA-----ATATCACAAAGTGAATACATCCCTGTCACTATAACCAAGTTAGG--ATGTAAATTAATTCCCCTCCTTCCAAATTACATCCTC--TTACTCATC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134812 213 - 122082543 AAAGATGGGTTAAAAATAAGTTGAAATGGTTCCTAATTTGTTTGTGGCGGCAAATGTATTTAAAACATTTGGAA---GATCTACTGTACATATTGAAAGAG--ACAAGCT-ATGTTATGGTGGAAAGGATATG-----ACAAA-----ATAAACATGCCAGTCTCATTACTAATCAGGTAAGAAGTACAAATTTATCTAATT-TTTACAAACAATACCCTC--TCACTATTT i mm10.chr11 I 5 C 0 s canFam3.chr9 21481072 170 + 61074082 ------------------AATTGAAGGGGTA--------GTCTTGGTG-------ATAGT-GCTCCTTTTTATA---AAT-TATAATACATT-------AA-----AATC-GA-TAATTTCAAATCTGATAGA-----ATATCACCGAGTGAACCC--CCATGTCGCTATTACCAGGTTAACAAAAAGAACTTAATTTAATCCCCTTCAAATTATAATCCTTATTATTC--- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 492838 156 - 852752 CATGAATGAAT-GAGATTA---GATCTTATATTTGAAGTTTCTTTGAAGTCTAACATATT------------------------------------------TTTAACTC-AT---ATTTCCCA--------A-----A---------GATAAAACATCCATGTCTCTGTTATCAGGTTAATAAACAGAATTTAACCCTACTGTGTTCAA--TATACTATC--ACCCTCATC i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=37767.000000 s hg38.chr17_JH159148v1_alt 32484 5 + 88070 CC-AAA s panTro5.chr17 16343585 5 + 83181570 CC-AAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248208 5 + 83442489 CC-AAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095146 6 + 4267968 CCAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080250 5 - 2193130 CC-AAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107418 5 + 10377808 CC-CAA i macNem1.NW_012014910v1 I 1 C 0 s cerAty1.NW_012006043v1 1992692 5 - 8458610 CC-CAA i cerAty1.NW_012006043v1 I 1 C 0 s chlSab2.chr16 64949031 5 + 75148670 CC-CAA i chlSab2.chr16 I 11654 C 0 s manLeu1.NW_012106252v1 2177040 5 + 4244037 CC-CAA i manLeu1.NW_012106252v1 I 1 C 0 s colAng1.NW_012122154v1 2200034 5 + 4569836 CC-CAA i colAng1.NW_012122154v1 I 1 C 0 s saiBol1.JH378271 1864368 5 + 3513951 CC-AAA i saiBol1.JH378271 I 2 C 0 s cebCap1.NW_016107730v1 1909986 5 + 1920343 CC-AAA i cebCap1.NW_016107730v1 I 2 C 0 s aotNan1.NW_018502359v1 7024020 5 - 7032639 CC-AAA i aotNan1.NW_018502359v1 I 2 C 0 s otoGar3.GL873537 22861950 5 + 28711273 CC-AAT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22135025 5 - 122082543 CT-CAA i mm10.chr11 C 0 C 0 s canFam3.chr9 21481242 5 + 61074082 CC-AAA i canFam3.chr9 C 0 I 9850 s dasNov3.JH570468 492994 5 - 852752 CC-CAA i dasNov3.JH570468 C 0 C 0 e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=514676.000000 s hg38.chr17_JH159148v1_alt 32489 97 + 88070 AAACCACTAA--TCACTC--TATCAAGTTGCAACCCTGTAGGTCAA-TT-TG---GCTATTCCTTTTTTACTTC-GTGTGAATAAAA-ATTATAATATTTGCTTCTCT s panTro5.chr17 16343590 98 + 83181570 AAACAGCTAA--TCGCTC--TATCAAGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTCTGCTTCTGTGTGAATAAAA-ATTATAATATTTGCTTCTCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248213 96 + 83442489 AAACAGCTAA--TCGCTC--TATCAAGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTCTGCTTC--TGTGAATAAAA-GTTATAATATTTGCTTCTCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095152 98 + 4267968 AAACAGCTAA--TCACTC--TATCAAGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTCTGCTTCTGTGTGAATAAAA-ATTATAATATTTGCTCCTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080255 98 - 2193130 AAACCACTAA--TCACTC--TATCAAGTTGTAACCCTGTAGGTCAA-TT-TG---ACTATTCCTTTTTTACTTCTGTGTGAATAAAA-ATTATAATATTTCCTTCTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107423 96 + 10377808 --ACTGCTCA--TCACTC--TGTCAAGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTTTACTTCTGTGCGAATAAAA-ATTATAATATATGTTTCTCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992697 96 - 8458610 --ACCGCTCA--TCACTC--TGTCAAGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTTTACTTCTGTGTGAATAAAA-ATTATAATATATGTTTCTCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949036 95 + 75148670 AGACAGCTAA--TCACTC--TGTTATGTTCTAATCCAGTAGGTAACTTT-TG---GCTTTAAA----AAATGTTCATGTAAATAAAA-ATTATAATATTTACTTCTCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177045 96 + 4244037 --ACCGCTCA--TCACTC--TGTCAAGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTTTACTTCTGTGCGAATAAAA-ATTATAATATATGTTTCTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200039 96 + 4569836 --ACTGCTCA--TCACTC--TGTCACGTTGTAACCCTGTAGGTCAA-TT-TG---GCTTTTCCTTTTTTACTTCTGTGTGAATAAAA-ATTATAATATATGTTTCTCT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864373 99 + 3513951 --ACAGATAA--TCCCTC--TATCAAGTTGTAACACTGTAGTTCAA-TT-TGCCCCCCTCTTTTTTTTTACTTCTGTGTGAACTAAA-ATGAGAATATTTCCTTCTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1909991 96 + 1920343 --ACAGATAA--TCCCTC--TATCAAGTTGTAACACTGTAGTTCAA-TT-TG---GCTTTTTCTTTTTTACTTCTGTGTGAATTAAA-ATGAGAATATTTTCTTCTCC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024025 98 - 7032639 --ACAGATAATCTCCCTC--TATCAAGTTGTAACACTGTAGTTCAA-TT-TG---ACTTTTTCTTTTTTATTTCTGTGTGAATTAAA-ATGAGAATATTTCCTTCTCT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861955 92 + 28711273 AGGTCCCTAA--TCTCTC--TATTGATTTGTAACACTGTAGATACA-TT-TT---GAGGTG--TTTTTGACATTTACGTAAAAGAAA-A----AAAATTCAACTGGCC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22135030 90 - 122082543 GGAGAGATGA--TCACTTTGTATCAAGTT----TACTTATGGCCAG-TG-AA---GC----CAACTTTGGCGTCTTTGCAAATAAAA-GTTATA--ATTGATTTCTCT i mm10.chr11 C 0 C 0 s dasNov3.JH570468 492999 90 - 852752 -----GATAA--TCACTG--TACTGACTTGGAA-ATTGCAAATAAG-TTATG---AC----AGTTTTTTACGTTGTTTTAAATGAAATAATGTAAAATTGACTTCTTT i dasNov3.JH570468 C 0 I 3941 e canFam3.chr9 21481247 9850 + 61074082 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=22592.000000 s hg38.chr17_JH159148v1_alt 32586 3 + 88070 ATT s panTro5.chr17 16343688 3 + 83181570 ATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248309 3 + 83442489 ATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095250 3 + 4267968 ATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080353 3 - 2193130 ATT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107519 3 + 10377808 GTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992793 3 - 8458610 GTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949131 3 + 75148670 ATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177141 3 + 4244037 GTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200135 3 + 4569836 ATT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864472 3 + 3513951 ATT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910087 3 + 1920343 ATT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024123 3 - 7032639 ATT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22862047 3 + 28711273 ACT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22135120 3 - 122082543 ATT i mm10.chr11 C 0 I 10168 e canFam3.chr9 21481247 9850 + 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=66547.000000 s hg38.chr17_JH159148v1_alt 32589 10 + 88070 TCTTTTGCAT s panTro5.chr17 16343691 10 + 83181570 TCTTTTGCAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248312 10 + 83442489 TCTTTTGCAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095253 10 + 4267968 TCTTTTGCAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080356 10 - 2193130 TCTGTTGCAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107522 10 + 10377808 TCTTTTGCAT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992796 10 - 8458610 TCTTTTGCAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949134 10 + 75148670 TCTTTGGCAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177144 10 + 4244037 TCTTTTGCAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200138 10 + 4569836 TCTTTTGCAT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864475 10 + 3513951 TCCTTTGCAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910090 10 + 1920343 TCTCTCACAT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024126 10 - 7032639 TCTTTTGCAT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22862050 10 + 28711273 GTCTTTACAT i otoGar3.GL873537 C 0 I 5348 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 21481247 9850 + 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=59132.000000 s hg38.chr17_JH159148v1_alt 32599 10 + 88070 AATCAGAGGT s panTro5.chr17 16343701 10 + 83181570 AATCAAAAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248322 10 + 83442489 AATCAAAAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095263 10 + 4267968 AATCAAAAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080366 10 - 2193130 AACCAGAGGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107532 10 + 10377808 AATCACAAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992806 10 - 8458610 AATCACAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949144 10 + 75148670 AATCAAAAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177154 10 + 4244037 AATCACAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200148 10 + 4569836 AATCACAAGT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864485 10 + 3513951 AATCAAAAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910100 10 + 1920343 AATCAAAAGT i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024136 10 - 7032639 AATCAAAAGT i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 21481247 9850 + 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=100059.000000 s hg38.chr17_JH159148v1_alt 32609 16 + 88070 AATAATTATTGCCTAG s panTro5.chr17 16343711 16 + 83181570 AATAATTACTGCCTAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248332 16 + 83442489 AATAATTATTGCCTAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095273 16 + 4267968 AGTAATTATTGCCTAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080376 16 - 2193130 Aataattattgcctag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107542 16 + 10377808 AATAATTATCACCTAG i macNem1.NW_012014910v1 C 0 I 308 s cerAty1.NW_012006043v1 1992816 16 - 8458610 AATAATTATCACCTAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949154 16 + 75148670 AATCCTTATTGCATAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177164 16 + 4244037 AATAATTATCACCTAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200158 16 + 4569836 AATAattatcgcctag i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864495 16 + 3513951 AATAGCTATTGCCTAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910110 16 + 1920343 Aatagttattgccttg i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024146 16 - 7032639 AATAGTTATTGCCTAG i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 39587344 16 - 61074082 AAAAACTGTCACCTAG i canFam3.chr9 T 2534 C 0 e mm10.chr11 22135123 10168 - 122082543 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=719638.000000 s hg38.chr17_JH159148v1_alt 32625 126 + 88070 TCATTTTGCACTCTTCATGTCAGCAGATCAGAAGGCAGAGAAAAGAGTTCCTTTTTGGTGAGGGGTAATTATCCTGTTTTCATGGCATGT--AGGAGAATGTATCTGTAGCTCAGGAGATTT-ACTGAA s panTro5.chr17 16343727 126 + 83181570 TCATTTTGCACTCTTTATGTCAGCTGTTTAGAAGGCAGAGAACAGGGTTCTTGTTTGTTGAGGGGTAATTATCCTGAAGTGGTAGAATGT--AGGAGAACGTATCTGTAACTCAGGAGATTT-ACTGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248348 126 + 83442489 TCATTTTGCACTCTTTATGTCAGCTGTTTAGAAGGCAGAGAACAGGGTTCTTGTTTGTTGAGGGGTAATTATCCTGAAGTGGTAGAATGT--AGGAgaacgtatctgtaactcaggagattt-actgaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095289 126 + 4267968 TCATTTTGCACTCTTTATGTCAGCTGATTAGAAGGCAGAGAACAGGGTTCTTGTTTGTTGAGGGGTAATTATCCTGAAGTCGTAGAACGT--AGGAgaacgtatctgtaactcaggagattt-actgaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080392 126 - 2193130 tcattttgcactcttcatgtcagcagatcagaagacagagaaaagagttcctatttggtgaggggtgattatcctgttttcatggcatgt--aggagaatgtatctgtagctcaggagattt-actgaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107866 119 + 10377808 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG-------TTGGTGAGGGGTAATTATTCTGAAGGCATAGAATGT--Agaagaatgtatctgtagctcgggagattt-actgaa i macNem1.NW_012014910v1 I 308 C 0 s cerAty1.NW_012006043v1 1992832 119 - 8458610 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG-------TTGGTGAGGGGTAATTATTCTGAAGGCATAGAATGT--AGGAgaatgtatccgtagctcgggagattt-actgaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949170 126 + 75148670 TCATTTTGGACTCTTCATATCAGGAGAGCAGCAGACAGAGAAAGGAGTTACTATTTGGTGAGGAGTAATTATCCTCAAGCCACATCGTGT--AGGAGAATATATCTATAGCTCAGGAGATTT-ACGGAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177180 119 + 4244037 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG-------TTGGTGAGGGGTAATTATTCTGAAAGCATAGAATGT--AGGAgaatgtatccgtagctcgggagattt-actgaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200174 119 + 4569836 tcattttgcactctttatgtcagctgagcagaaggcagaggacacag-------ttggtgaggggtaattattctgaaggcatagaatgt--aggagaatgtatctgtagctcaggagattt-actgaa i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864511 126 + 3513951 TCATTTTACATTCTTCATGTCAGCAGAGCAGAAGGCAAAGAACAGAGTTCCTATTTGGTGAGAAGCTATTATCCTGAAGTCAGATAATAT--AGGTGAATCTATCTGTAGCTCAAGAGATTT-ACTGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910126 126 + 1920343 tcattttacactcttcatgtcaacagagcagaaggtaaaaaacagagttcctgtttggttaggagtaattatcctgaagtcggagagtgt--aggggaatctatctgtagctcaggagattt-actgaa i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024162 126 - 7032639 TCATTTTACACTCTTCATGTCAGCAGATTAGAAGGCAAAGAACAGAGTTCCTATTTGATGAGGAGCTATTATCCTGAAGTCGGAGAATGT--AAGAGAATCTATCTGTAGCTCAGGAGATTT-ACTGAA i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 39587360 129 - 61074082 TCATTTTGTACTCCTCATGTTAGTAGACGAGCATGTAGAGAAAAGGGTCACTGTTCGGTGATGGATAATTATCATAAAAAGGTAGACTGCAGAGAGAAAGGTATCTGGAACTCAGGAGATTTCACTGGA i canFam3.chr9 C 0 I 2283 e mm10.chr11 22135123 10168 - 122082543 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=585300.000000 s hg38.chr17_JH159148v1_alt 32751 95 + 88070 CAtactaatttactagcactgctgtgataaaccactacaaaccaagtggcttaaatttatattcttgcagttctgaaggctagcagtctggattt s panTro5.chr17 16343853 95 + 83181570 CAtactaatttactagcactgccgtgataaaccactacaaaccaagtggcttaaatttattttctcatagttctgaaggctagcagcctgaattt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248474 95 + 83442489 catactaatttactagcactgccgtgataaaccactacaaaccaagtggcttaaatttattttctcatagttctgaaggctagcagcctgaattt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095415 95 + 4267968 catactaatttactagcactgccgtgataaaccactacaaaccaagtggcttaaatttattttctcatagttctgaaggctagcaccctgaattt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080518 95 - 2193130 catattaatttactagcactgccgtgataaaccactacaaaccaagtggcttaaatttatattctcgcagttctgaaggctagcagtctgaattt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2107985 95 + 10377808 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaattt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992951 95 - 8458610 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaattt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949296 95 + 75148670 tatattaacttgctatcagtgccatgataaattactgcaaaccaagtggcttaaatttattttttcacagttccgaaggcttctagtctgaaatt i chlSab2.chr16 C 0 T 11656 s manLeu1.NW_012106252v1 2177299 95 + 4244037 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaattt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200293 95 + 4569836 tatgttaatttactagcactgccatgataatctactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaattt i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864637 95 + 3513951 tatattaatttactagcactgccatgataaactattacaaaccaaatggcttaaactgattttctcatagttctgaaggctagcagtctgaattc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910252 95 + 1920343 tatattaatttactagcactgccatgataaactgctacaaaccaagtggcttaaatttattttctcctagttctgaaggccagcagtctgaattt i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024288 95 - 7032639 tatattaatttactagcactgccatgataaattactacaaaccaagtggcttaaatttattttctcataattctgaaggccagcagtctggattt i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=526808.000000 s hg38.chr17_JH159148v1_alt 32846 90 + 88070 aaggtgttgccaaggttgttttcacctgaggactgttaggaaagcatctgttccaggtctctctccttgaagtgtggatgtctgtcttct s panTro5.chr17 16343948 90 + 83181570 aaggtgttgacaaggttgttttcacctgaggactcttaggaaagcatctgttccaggtctctctccttgatgtgtagatgtctgtcttct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248569 90 + 83442489 aaggtgttgacaaggttgttttcacctgaggactcttaggaaagcatctgttccaggtctctctccttgatgtgtagatgtctgtcttct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095510 90 + 4267968 aaggtgttgacaaggttgttttcacctgaggactgttaggaaagcatctgttccaggtctctctccttgatgtgtagatgtctgtcttct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080613 90 - 2193130 aaggtgttgacaaggttgttttcacctgaggactgttaggaacgcatctgttccaggtctgtctccttgacgtgtggatgtctgtcttct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2108080 90 + 10377808 aaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993046 90 - 8458610 aaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937735 90 + 75148670 aaggtgttggcaatgttgttttcatctgagggctgtgagggaagtatctgttccaggtctctctccttgacctgtagatgtctatcttct i chlSab2.chr16 T 11656 C 0 s manLeu1.NW_012106252v1 2177394 90 + 4244037 aaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200388 90 + 4569836 aaggtgttgacaaggttgtttttacctgaggattgttaggaaagtatctgttccaggtgtctctccttgacttgtagatatctgtcttct i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1864732 90 + 3513951 caggtgtggacaaggctgtttttgcctgaagactgtaaggaaagtatctgttcctggtctccctccttgacttgtagatgtgtgtctttt i saiBol1.JH378271 C 0 I 6257 s cebCap1.NW_016107730v1 1910347 89 + 1920343 caggtgtggac-aggttgtttcttcctgaagactgtaaggaaagtatctgttcctggtctccctccttgacttgtagatgtgtgtcttct i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024383 90 - 7032639 caggtgtggacaaggttgtttttgccagaagactataaggaatatatctgttcctggtctccctccttgacttgtagatgtgtgtcttct i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=1481298.000000 s hg38.chr17_JH159148v1_alt 32936 267 + 88070 ccatgtgtctctaacatgaccatccttctagatgcacactgcctctgaacttacccattctatacaggcatcagtaatattgaatcagaagc----ctgattccaatatgactggatcttaagtaattacagtttcaatatccctatttgaatatgaattttgggggacacaagtcaagccataataTTGGAGAATCTCATAGTGTGTCCATGCCCAGTGATAACCACAAATGAGTGAAAACAGCAATCGCAG-TGGACAATGGTACAGTAA s panTro5.chr17 16344038 267 + 83181570 ctatgtgtctcttacgtgaccttccttctagatgcacactacctctgaaattccccattctatacaggcatcagtaatactgaatcagaagc----ctgattccaatatgaccggatcttaagtaattacagtttcaatatccctatttgaatatgaattttgggggacacaagtcaagccataataTTGGAGAATCTCATAGTGTGTCCATGCCCAGTGATAACCACAAATGAGTGAAAACAGCAATCACAG-TGGACAATGGTACAGTAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248659 267 + 83442489 ctatgtgtctcttacgtgaccttccttctagatgcacactacctctgaaattccccattctatacaggcatcagtaatactgaatcagaagc----ctgattccaatatgaccggatcttaagtaattacagtttcaatatccctatttgaatatgaattttgggggacacaagtcaagccataatattggagaatctcatagtgtgtccatgcccagtgataaccacaaatgagtgaaaacagcaatcacag-tggacaatggtacagtaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095600 269 + 4267968 --atgtgtctcttacgtgaccttccttctagatgcacaccacctctgaaattccccattctatacaggcatcagtaatattgaatcagaggcctaactgatttccatatgaccagatcttaactaagtacattttcaatgaccctatttgaatatgaattctgagggacacaagtcaacccataacactggagaatctcatagtgtgtccatgcccagtgataaccacaaatgagtgaaaacagcaatcacag-tggacagtggtacagtaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080703 267 - 2193130 ccatgtgtctctaacatgaccttccttctagatgcacattgcctctgaacgttcccattctatacagtcatcagtaatattgaatcggacgc----ccgattccaatatgaccagatcttaagtaattacattttcaatatccctatttgaatatgaattttgggggacacaagtcaacccataacattggagaatctcatagtgtgtccatgcccagtgataaccacaaatgagtgaaaacagcaatcccag-tggacaatggtacagtaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2108170 269 + 10377808 ccacctgtctcttacatgatcttccttctagatgcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattacatttc-agtgaccttatttgaatatgaattttgggggagac-attcaacccatagtactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacag-tggacaatggtacagtaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993136 269 - 8458610 ccacctgtctcttacatgatcttccttgtagatgcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattacatttc-agtgaccttatttgaatatgaattttgggggagac-attcaacccataacactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacag-tggataatggtacagtaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937825 270 + 75148670 ccatgtgtgtcttacatcatcttccctctatatgcgtctggtctc--aatttcccctttttatacagacatcagtcgtattgagtcagaggcacaatttattccaatatgaccttatgttaccatattgcattttaaatgaccctatttGAATATGAGTTATTGAGGACACAATTCAACCCATAACCTCGGAATATCTCAGAGTGTATCCATGCCCAGTGATAAACACAAATGAGTAACAAAAGCAACCACGGTTGGACAATGGTATAGTAA i chlSab2.chr16 C 0 T 4453 s manLeu1.NW_012106252v1 2177484 269 + 4244037 ccacctgtctcttacatgatcttccttctagatgcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattacatttc-agtgaccttatttgaatatgaattttgggggagac-attcaacccataacactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacag-tggataatggtacagtaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200478 270 + 4569836 ccacgtgtctcttacatgatcttccttctagatgcacacggcctctgaacttccccattctatacaggcatcagtcctattaaatcagaggcctaacttattccaatatgacctgatcttagctaattacattttcagtgaccttatttgaatatgaattttgggggagac-attcaacccataacactggagaatctcgtggtgtgtccatgctcagtgataaccacacatgagtgaaaatggcaatcacag-cggacaatggtacagtaa i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1871079 270 + 3513951 ccctgtgtctcttacgttagcttccttctagaagcacactgcctctgaacttccccattctatacaggcatcagtcacattgaatcagaggcctaactgattccagtatgacctgatcttaactaattacattttcagtgactctatttGAGTATGAATTTGTGGAGACAC-AGTCAACCCATAACACTGAAGAATCTCATAGTGTGTCCACGCCCGGTGATAACCACCAGTGACTGAAGACAGCAATCACAG-TGGACAATGGCACAGTAA i saiBol1.JH378271 I 6257 C 0 s cebCap1.NW_016107730v1 1910436 266 + 1920343 ccatgtgtctgttatgttagcttccttctag-agcacactgcctctgaacttccccattctatacaagcatcagtcatattgaatcagaggc----ctgtttccaatatgacctgatcttaactagttacattttcaatgactctatttgagtatgaatttgtggagacacaagtcaacccataacactgaataatctcatagtgtgtccatgcccagtgataaccaccaatgagtgaaaacagcaatcacag-tggacaatggtacagtaa i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024473 271 - 7032639 ccatgtgtctcttaccttagcttccttctagaaacacactgcctctggacttccccattctatacaggcatcagtcatattgaatcagaggcctaactgattccaatatgatgtgatcttaactaattacattttcaatgactctatttgagtatgaatttgtggagacacaagtcaacccataacCCTGAAGAATCTCATAGTGTGTCCATGCCCGGTGATAACCACCAATGAGTGAAAACAGCAATCACGG-TGGACGATGGTACAGTTA i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=71531.000000 s hg38.chr17_JH159148v1_alt 33203 14 + 88070 CTAGCAGCTCAGAC s panTro5.chr17 16344305 14 + 83181570 CTAGCAGCTCAGAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248926 14 + 83442489 ctagcagctcagac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095869 14 + 4267968 ctaggggctcagac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080970 14 - 2193130 ctagcagctcagac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2108439 14 + 10377808 ctagtggctcagac i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993405 14 - 8458610 ctagcggctcagac i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2177753 14 + 4244037 ctagtggctcagac i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200748 14 + 4569836 ctagcggctcagac i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1871349 14 + 3513951 CTAGCAGCTCAGCC i saiBol1.JH378271 C 0 T 5766 s cebCap1.NW_016107730v1 1910702 14 + 1920343 ctagcagctcagac i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024744 14 - 7032639 CCTGCAGCTCAGAA i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 493089 3941 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64938095 4453 + 75148670 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=7800.000000 s hg38.chr17_JH159148v1_alt 33217 1 + 88070 C s panTro5.chr17 16344319 1 + 83181570 C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248940 1 + 83442489 c i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095883 1 + 4267968 c i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080984 1 - 2193130 c i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2108453 1 + 10377808 c i macNem1.NW_012014910v1 C 0 T 4743 s cerAty1.NW_012006043v1 1993419 1 - 8458610 c i cerAty1.NW_012006043v1 C 0 T 4404 s manLeu1.NW_012106252v1 2177767 1 + 4244037 c i manLeu1.NW_012106252v1 C 0 T 4425 s colAng1.NW_012122154v1 2200762 1 + 4569836 c i colAng1.NW_012122154v1 C 0 T 4373 s saiBol1.JH378271 1865597 1 + 3513951 c i saiBol1.JH378271 T 5766 C 0 s cebCap1.NW_016107730v1 1910716 1 + 1920343 c i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024758 1 - 7032639 C i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 497030 1 - 852752 C i dasNov3.JH570468 I 3941 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64938095 4453 + 75148670 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=1826.000000 s hg38.chr17_JH159148v1_alt 33218 1 + 88070 T s panTro5.chr17 16344320 1 + 83181570 T i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248941 1 + 83442489 t i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095884 1 + 4267968 c i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080985 1 - 2193130 c i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2103711 1 + 10377808 c i macNem1.NW_012014910v1 T 4743 C 0 s cerAty1.NW_012006043v1 1989016 1 - 8458610 c i cerAty1.NW_012006043v1 T 4404 C 0 s colAng1.NW_012122154v1 2196390 1 + 4569836 c i colAng1.NW_012122154v1 T 4373 C 0 s saiBol1.JH378271 1865598 1 + 3513951 t i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910717 1 + 1920343 t i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024759 1 - 7032639 T i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 497031 1 - 852752 T i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e manLeu1.NW_012106252v1 2177768 4425 + 4244037 T e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64938095 4453 + 75148670 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=11521.000000 s hg38.chr17_JH159148v1_alt 33219 2 + 88070 TT s panTro5.chr17 16344321 2 + 83181570 TT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248942 2 + 83442489 tt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095885 2 + 4267968 TC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080986 2 - 2193130 tt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2103712 2 + 10377808 tt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989017 2 - 8458610 tt i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2173343 2 + 4244037 TT i manLeu1.NW_012106252v1 T 4425 C 0 s colAng1.NW_012122154v1 2196391 2 + 4569836 tt i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1865599 2 + 3513951 tc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910718 2 + 1920343 tt i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7024760 2 - 7032639 TT i aotNan1.NW_018502359v1 C 0 T 4825 s dasNov3.JH570468 497032 2 - 852752 TT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64938095 4453 + 75148670 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=6600.000000 s hg38.chr17_JH159148v1_alt 33221 1 + 88070 C s panTro5.chr17 16344323 1 + 83181570 C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248944 1 + 83442489 c i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095887 1 + 4267968 C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080988 1 - 2193130 c i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2103714 1 + 10377808 c i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989019 1 - 8458610 c i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2173345 1 + 4244037 C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196393 1 + 4569836 c i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1865601 1 + 3513951 c i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1910720 1 + 1920343 c i cebCap1.NW_016107730v1 C 0 T 4752 s dasNov3.JH570468 497034 1 - 852752 C i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7024762 4825 - 7032639 T e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e chlSab2.chr16 64938095 4453 + 75148670 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=180693.000000 s hg38.chr17_JH159148v1_alt 33222 36 + 88070 TGTCCATTTTCTTCCTCTCCTCCCCTCCCTCCTTTT s panTro5.chr17 16344324 36 + 83181570 TGTCCATTTTCTTCCTCTCCTCCCCACCCTCCTTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248945 36 + 83442489 TGTCCATTTTCTTCCTCTCCTCCCCACCCTCCTTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095888 36 + 4267968 TGTTCCTTTTCTTCCTCTCCTCCTCTCCCTCCTTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2080989 36 - 2193130 TGTCCATTTTCTTCCTCTCCTCCTCTCCCTCCTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2103715 36 + 10377808 TGTCTctcttctttctctcctcctctccctccttct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989020 36 - 8458610 TGTCTctcttctttctctcctcctctccctccttct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933642 36 + 75148670 TGTCTCTCTTCTTTCTCTCCTCCTCTCCTTCCTTCT i chlSab2.chr16 T 4453 C 0 s manLeu1.NW_012106252v1 2173346 36 + 4244037 TGTCTCTCTTCTTTCTCTCCTCCTCTCCCTTCTTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196394 36 + 4569836 tgtctctcttctttctctcctcctctccctccttct i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1865602 36 + 3513951 tctttctcctcttcctctcctccttgtcttccttct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1905969 36 + 1920343 tctccttcttcttcctctcttcctctccctcattct i cebCap1.NW_016107730v1 T 4752 C 0 s dasNov3.JH570468 497035 34 - 852752 TCTTCATCTTCCTCCACTGTT--TATTCCTTATTTT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7024762 4825 - 7032639 T e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=459174.000000 s hg38.chr17_JH159148v1_alt 33258 79 + 88070 CCTAGAATTTCTGGCTATCCATCACAGTTAAGAAGCAAA----------------------------GAATAAATCTGAGTAGAGCAAATGGCAGATCATAGATAAC s panTro5.chr17 16344360 79 + 83181570 CCTAGAATTTCTGGCTATCCATCACAGTTAAGAAGCAAA----------------------------GAATAAATCTGAGTAGAGCAAATGGCAGATCATAGATAAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16248981 79 + 83442489 CCTAGAATTTCTGGCTATCCATCACAGTTAAGAAGCAAA----------------------------GAATAAATCTGAGTAGAGCAAATGGCAGATCATAGATAac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4095924 78 + 4267968 CCTAGAATTTCTGGCTATCCATCACA-TTAAAAAGCAAA----------------------------GATTGGATGTAAGTGGAGCAAATGGCAGATCATAGATAAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081025 78 - 2193130 CCTACAATTTCTGGCTATCC-TCACAGTTAAGGAGCAAA----------------------------GAATAAATCTGAGTAGAGCAAACGGCAGATCATAGATAAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2103751 79 + 10377808 cctAGAATTTCTGGCTGTCCATCATAGTTAAGAAGCAAA----------------------------GATTGGATCTCAGTGGAGCGAATGACAGATCATAGATAAC i macNem1.NW_012014910v1 C 0 I 15102 s cerAty1.NW_012006043v1 1989056 79 - 8458610 cctAGAATTTCTGGCTGTCCATCACAGTTAAGAAGCAAA----------------------------GATTGGATCTCAGTGGAGCGAATGACAGATCATAGATAAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933678 79 + 75148670 CCTAGAATTTCTGGCTGTCCATCACAGTTAAGAAGCAAA----------------------------GATTGGATCTGAGTGGAGCGAATGACAGATCATAGATGAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173382 79 + 4244037 CCTAGAATTTCTGGCTGTCCATCACAGTTAAGAAGCAAA----------------------------GATTGGATCTGAGTGGAGCGAATGACAGATCATAGATAAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196430 79 + 4569836 cctAGAATTTCTGGCTGTCCATCACAGTTAAGAAGCAAA----------------------------GATTGGATCTGAGTGGAGCAAATGACAGATCATAGATAAC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1865638 79 + 3513951 tctAGAGTTTGTGGTTGTTTACTACATTTAAGAAGCAAA----------------------------GATTGGGTCTGTGTGGAGCAAATGATAGATTGTCGCTAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1906005 79 + 1920343 cCTAGAATTTCTGGCTGTCCATCACAGTTAAGAAGCAAA----------------------------GATTAAATCTGAGTGGAGCAAACGGCAGGTCATAGAGAAC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7019937 79 - 7032639 CCTAGAATTTCTGGCTGTCCATCACAGTTAAGAAGCAAA----------------------------GATTAAAGCCGAGTGGAGCAAACGGCAGATCATAGAGAAC i aotNan1.NW_018502359v1 T 4825 C 0 s dasNov3.JH570468 497069 103 - 852752 TTAAAAACTTG----TATACATGACTTTGAATAGGAAAAACGGGTTGGAGTAAGTTCAATGGTGTGTGACTCGATCTGTATGGAGGAATAGTTGTATTCTGCATTAT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=29028.000000 s hg38.chr17_JH159148v1_alt 33337 5 + 88070 GTTTT s panTro5.chr17 16344439 5 + 83181570 GTTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249060 5 + 83442489 gtttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096002 5 + 4267968 ATTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081103 5 - 2193130 GTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2118932 5 + 10377808 GTTTT i macNem1.NW_012014910v1 I 15102 C 0 s cerAty1.NW_012006043v1 1989135 5 - 8458610 ATTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933757 5 + 75148670 ATTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173461 5 + 4244037 ATTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196509 5 + 4569836 ATTTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1865717 4 + 3513951 ATTT- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1906084 5 + 1920343 GTTTT i cebCap1.NW_016107730v1 C 0 I 5572 s aotNan1.NW_018502359v1 7020016 5 - 7032639 GTTTT i aotNan1.NW_018502359v1 C 0 I 1 s dasNov3.JH570468 497172 5 - 852752 GTTTT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=233848.000000 s hg38.chr17_JH159148v1_alt 33342 55 + 88070 CATTATCCCATCCATATATTTTGGattttagtgtgctcaggccagtttctatctt s panTro5.chr17 16344444 55 + 83181570 CATTATCCCGTCCATATATTTTGGattttagtgtgctcaggccagtttctatctt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249065 55 + 83442489 cattatcccgtccatatattttggattttagtgtgctcaggccagtttctatctt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096007 55 + 4267968 CATTATCCTGTTCCTATTTCTCAGGTCTTACTGTCCTCGGGCCAGTTTATATCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081108 54 - 2193130 CATTATCCCATCCATATATTTTGGATCTTAGTGTGCTCAGGCCAG-TTCTATTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2118937 55 + 10377808 CATGATTGCATCCCTATATCTTGGATATTAGTGTGCTTGGATTAATTTCCATCTG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989140 55 - 8458610 CATTATCCTGTCCATATTTCTCGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933762 55 + 75148670 CATtatcctgtccatatttctcggatcttagtgtgcttgagtcagtttccatttg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173466 55 + 4244037 CATTATCCTGTCCATATTTCTCAGATCTTAGTGTGCTTGAGTCAGTTTCCATTTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196514 55 + 4569836 CATTATCCTGTCCATATTTCTTGGATCTTAGTGTGCTTGAGTCAGTTTCCATTTG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1865721 55 + 3513951 CATCATGCCGCCCCTGTGTCTTGGATCTCAGTATTCTCAGACCAATATGCGTTTG i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7020022 55 - 7032639 CATTATCCTGCCAATGTATCTTGGattttactgtgcttgggccattttctatctg i aotNan1.NW_018502359v1 I 1 C 0 s dasNov3.JH570468 497177 54 - 852752 GATTA-CCCACCCATGTATCTTCTATCTTGGTATATTCAGGTGGTCTTCCATCTA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e cebCap1.NW_016107730v1 1906089 5572 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=326964.000000 s hg38.chr17_JH159148v1_alt 33397 50 + 88070 ccagaatctgcatctctgtgcctaaaggctctTGTATTGTACCTGCAGAA s panTro5.chr17 16344499 50 + 83181570 ccagaatctgcatctctgtgcctaaaggctCTTGTATTGTACCTGCAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249120 50 + 83442489 ccagaatctgcatctctgtgcctaaaggctctTGTATTGTACCTGCAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096062 50 + 4267968 CCAGAGTCTGCATCTCCGTGCCTACGGGCTTTTGTATTGCCACTGTAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081162 50 - 2193130 CCAGAATCTGCATCTCTGTGCCTAAAGGCTCTTGTATTGCACCTGCAGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2118992 50 + 10377808 TCAAAATCTGCATCTCTGTGCCTAAGGGCTCTTGTATTGCAGCTGTAGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989195 50 - 8458610 CCAGAATCTGTATCTCTGTGCCTAAGGGCTCTTGTATTGCAATTACAGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933817 50 + 75148670 ccagaatctgtatctctgtgcctaagggctcttgtattgcaattgcagaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173521 50 + 4244037 CCAGAATCTGTATCTCTGTGCCTAAGGGCTCTTGTATTGCAATTACAGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2196569 50 + 4569836 CCAGAATCTGTATCTCTGTGCCTAAGGGCTCTTGTATTGCAACTGCAGAA i colAng1.NW_012122154v1 C 0 I 823 s saiBol1.JH378271 1865776 50 + 3513951 CCAGAATCGCCATCTCTGTGCCTAAGGGCTCTTGTATTGCAACTGAAGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1911661 50 + 1920343 ccagaatctgcatctctgtgcctaagggctCGTGTATTGCAACTGGAGAA i cebCap1.NW_016107730v1 I 5572 C 0 s aotNan1.NW_018502359v1 7020077 50 - 7032639 gcagaatctgcatctctgtgcataagggctcttatattgcagctggagaa i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 497231 50 - 852752 CCAATATGTGTACCTCTCTTCCTAACAGCTCTTTTTAAGCAAGTGTAGGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=142398.000000 s hg38.chr17_JH159148v1_alt 33447 35 + 88070 AGTCATGTCACTTCTGCATGCCACAGAGCGAAAA-A s panTro5.chr17 16344549 35 + 83181570 AGTCATGTCACTTCTGCATGCCACAGAGCGAAAA-A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249170 35 + 83442489 AGTCATGTCACTTCTGCATGCCACAGAGCGAAAA-A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096112 35 + 4267968 AGTAATGTCACCTGTGCATGCTACACAGAGAAAA-A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081212 35 - 2193130 AGTCATGTCACTTCTGCATGCCACACAGCGAAAA-A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2119042 35 + 10377808 AGTCATGCCACCTGTGAATGCAACACAGAGAAAA-A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989245 35 - 8458610 AGCCATGTCACCTGTGCATTCCACACAGAGGCAT-A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64933867 35 + 75148670 agccatgtcacccgtgcattccacatagaggaat-a i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2173571 35 + 4244037 AGCCATGTCACCTGTGCATTCCACACAGAGGAAT-A i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1865826 34 + 3513951 CGTCAAGTCACCTGTGCATGTCACACAGAGAAAG-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1911711 34 + 1920343 AGTCAAGTTACCTGTGCATGTCACACAGAGAAAG-- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020127 35 - 7032639 agtcatgtcacctgtgaatgccacacagaggaata- i aotNan1.NW_018502359v1 C 0 I 393 s dasNov3.JH570468 497281 35 - 852752 AGTCGTGTGTCCTGTACATATCATGCTGAGAAAA-A i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=142362.000000 s hg38.chr17_JH159148v1_alt 33482 35 + 88070 C------ACTCGACCATTGATTCTGGGGAGCTGATTTACAA s panTro5.chr17 16344584 35 + 83181570 C------ACTCGACCATTGATTCTGGAGAGCTGATTTACAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249205 35 + 83442489 C------ACTCGACCATTGATTCTAGAGAGCTGATTTACAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096147 35 + 4267968 C------ACTCAAACAGTGATTCTGGAGAGCTGATTTACAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081247 35 - 2193130 C------ACTCAGCCATTGATTCTGGAGAGCTGATTTACAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2119077 35 + 10377808 C------ACTCAACCAGTGATTCTGGAGAGCTGATTTATAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1989280 41 - 8458610 TCACTCAActcaaccaatgattctggagagctgatttacaa i cerAty1.NW_012006043v1 C 0 I 439 s chlSab2.chr16 64933902 41 + 75148670 tcactcaactcaaccaatgattctggagagctgatttacaa i chlSab2.chr16 C 0 I 439 s manLeu1.NW_012106252v1 2173606 41 + 4244037 TCACTCAActcaaccaatgattctggagagctgatttacaa i manLeu1.NW_012106252v1 C 0 I 27228 s saiBol1.JH378271 1865860 35 + 3513951 C------ATTCAACCAGTGATACTGGAGAGTTGATTTATGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1911745 35 + 1920343 C------ATTCAATCAGTGATTCTGGAGAGTTGATTTATGA i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 497316 34 - 852752 C------ATTAAACCCATACATTTGgagagttgactttaa- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7020162 393 - 7032639 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=75799.000000 s hg38.chr17_JH159148v1_alt 33517 44 + 88070 AGACTCTAGCTCCTTTATTCCTGAAGTTGGAGAATTCTAATTTA s panTro5.chr17 16344619 44 + 83181570 AGACCCTAGCTTCTTTATTCCTGAAGTTGGGGAATTCTAATTTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249240 44 + 83442489 AGACCCTAGCTTCTTTATTCCTGAAGTTGGGGAATTCTAATTTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096182 43 + 4267968 AGACCCTAGCTCCTTTATTTC-AAAGTTGGAGAATTCTAATTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081282 44 - 2193130 AAACCCTAGCTCCTTTATTCCTGAAGTTGGAGAATGCTAATTTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2119112 40 + 10377808 AGACTGTAGCTTC---ATTCCTGAGGTAGGATAATTCTAGCTG- i macNem1.NW_012014910v1 C 0 C 0 s saiBol1.JH378271 1865895 42 + 3513951 AGACTCTAGCTTTGTTCTTCCTGAAGTAAGATAATTCTAATT-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1911780 44 + 1920343 AGACTCTAACTTTGTCCTTCCTGAAGTAGGATCATTTGAATTTG i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 497350 44 - 852752 agaccccagttccctcattcctcaagaagaataattctgaactc i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7020162 393 - 7032639 I e canFam3.chr9 39587489 2283 - 61074082 I e manLeu1.NW_012106252v1 2173647 27228 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e chlSab2.chr16 64933943 439 + 75148670 I e cerAty1.NW_012006043v1 1989321 439 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=682084.000000 s hg38.chr17_JH159148v1_alt 33561 264 + 88070 TGTGTTTTTCATCATTTCTAATAG-TTTTCCCTTTGGTTTAAGCTTTAGTTAGTCACTGTGATACTTACCAGCTCAATAGTGTAccctcttctgtgtcactttcctgatccc-taccggtgtgatctgcacttcc-caataaactactttcactggagtatttttcttggtatctgttctgggagaaaccacactatgataTTACAttaactctctcagcctcaatttcctcctctctacaatggtaacattaatacttactttgaa s panTro5.chr17 16344663 264 + 83181570 TGTGTTTTTCATCATTTCTAATAG-TTTTCCCTTTGGTTTAAGCTTTAGTTAGTCACTGTGATACTTACCAGCTCAATAGTGTAcccttttctgtatcactttcctgatccc-taccggtgtgatctgcacttcc-caataaactactttcactggagtatttttcttggtatctgttctgggagaaaccacactatgataTTACAttaactctctcagcctcaatttcctcctctctacaatggtaacattaatacctactttgaa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249284 264 + 83442489 TGTGTTTTTCATCATTTCTAATAG-TTTTCCCTTTGGTTTAAGCTTTAGTTAGTCACTGTGATACTTACCAGCTCAATAGTGTAcccttttctgtatcactttcctgatccc-taccggtgtgatctgcacttcc-caataaactactttcactggagtatttttcttggtatctgttctgggagaaaccacactatgataTTACAttaactctctcagcctcaatttcctcctctctacaatggtaacattaatacctactttgaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096225 264 + 4267968 TGTGTTTTTCATCATTTCTGATAG-TTTTCCCTTTGGTTTAAACTTTAGTTGGTCACTGTGATACTTACTGGCTCAATAGTATAcccttttctgtatctcttccctgatccc-taatggtgtgatctgcacttcc-caataaactactttcactggaatatttttctaagtatctgttctgggagaaactacactatgacaTTACAttaactctctcagccttgctttcctcatctctacaatggtaacattaatacctactttgaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081326 264 - 2193130 TGTGATTTTCATAATTTCTGATAG-TTTTTCCTTTGGTTTAAGCTTTAGTTAGTCACTGTGATACTTACCAGCTCAATAGTGTAcccttttctgtatcactttcctgatccc-taccggcgtgatctgcacttcc-ccataaactgctttcactggaatatttttctcggtatctgttctgggagaaaccacactatgacaTTACAttaactctgtcagcctcaatttcctcctctctacaatggtaacgttaatatctactttgaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2119152 248 + 10377808 TGTGTTTTTCATCATTTCTGATAA-TTTTCGCTTTAGTTTAAGCTTTAGTTGGTGACTGTGATACTGA----CTTAATAATGAACCCTTTTCTGTATCGCTTCCCCAATCCC-TAC------------cacttcc-cagtaaactactttcactggaatctttttttcagagtctcttctatgagaaactaatctatgacaATACGTTCActctctcagcctcaaatttctcatctctacaaagggaacattaatacctattttgaa i macNem1.NW_012014910v1 C 0 T 14636 s manLeu1.NW_012106252v1 2200875 260 + 4244037 TGTGTTTTTCATCTTTTCTGATAG-ATTTCCCTTTAGTTTAAAGTTTAATTGCTCACTGTGATACTGA----CTTAATAGTGAAccctcttctgtatcacttccccagttcc-taccagtgtaatctgcatttcc-caataaactagtttccctggaatcttttcttcagcgtctcttctgggagaaACTTATCTGTGACATTATGttaactccctcagcctcaattttcttatctctaccatgggaacatgaacacctattctgaa i manLeu1.NW_012106252v1 I 27228 C 0 s saiBol1.JH378271 1865937 254 + 3513951 ----TTTTTCATCATTTCTGACAA-ATTTTTGTTTGGTTTAAGGTTTGTTTGGTTACTGCGACACTAG----TTGAATAGTGTAcccttttctgtatcacttctccagcatc-tactggtgtgatcggcagtttt-caataaactactttcactcgaata-ctttctcagagtttgttatggga-aaaccgaaCTCTGATATTACATTTcctctctgagcctcaattttctcatctctacaatgggaacattaatacctcctttgAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1911824 259 + 1920343 -TTCTTTTTCATCATTTCTTACAATTTTTTTGTTTGCTTTAAGCTTTCGTTGGTCACTGTGATACTAG----TTTAATAGTGTACCCTTTTCTGTACCACTTCTCCAGCATC-TACTGGTGTGATCCGCACTTTC-CCATAAACTGCTTTCGCTGGAATATTTTTCTCAGAGTTTGTTATGGGA-AAACCAAACTCTGATATTACATTTcctctctcagcctcaagtttctcatctctacaatgggaacatgagcacctactttgaa i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 497394 254 - 852752 tgcattttacatta--tctgatag-cttccattcaagtttaaacttcagctgcacactgtgatgcccg---gcttgatagtacaactttCCCTGTGCCATTTTCCCAATTCCTTAACAGTGCACTCTGCACTTCCTTAATAACATTCTTTCACTTCAAT------CTCAGCATGGTACATGGGGGAAACCATACTATggcattactttaagtcccttagctttgatttcctcatctctaaaagcaggctattaatacctacttgcc- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7020162 393 - 7032639 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e chlSab2.chr16 64933943 439 + 75148670 I e cerAty1.NW_012006043v1 1989321 439 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=66678.000000 s hg38.chr17_JH159148v1_alt 33825 46 + 88070 catttctttgagaataaatattaatgaaaataaagca---tttagtcac- s panTro5.chr17 16344927 46 + 83181570 cgtttctttgagaataaatattaatgaaaataaagca---tttagtcac- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249548 46 + 83442489 cgtttctttgagaataaatattaatgaaaataaagca---tttagtcac- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096489 45 + 4267968 catttcctcaagaataaatattaatgaacataaagca---tgtagtca-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081590 49 - 2193130 catttctttgagaataaatattaaagaaaataaagcattttttagtcat- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s manLeu1.NW_012106252v1 2201135 46 + 4244037 agtttgttaaagaattaatgataatgtacacaaagtg---tttagcaaa- i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1866191 46 + 3513951 TGTTTCTTCAATCGTTACTGAAAATATCCATAAAGGT---TTTAGTCAA- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912083 46 + 1920343 tgtttctttaagaattaatgataatgtccataaagca---tttgttcaa- i cebCap1.NW_016107730v1 C 0 C 0 s dasNov3.JH570468 497648 47 - 852752 agcttcttcaagaatttgagataatctatatagagca---tctagtccaa i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7020162 393 - 7032639 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e chlSab2.chr16 64933943 439 + 75148670 I e cerAty1.NW_012006043v1 1989321 439 - 8458610 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=185533.000000 s hg38.chr17_JH159148v1_alt 33871 86 + 88070 tacctatcaaatagaagtcaacccagaacatattagttc-ttt-ttttGTCC-----------------------------AGAAAA-------------------CTTAAAAAATAATTTTAATTTTGAAGATAA-------- s panTro5.chr17 16344973 86 + 83181570 tacctatcaaatagaagtcaacccagaacatattagttc-ttt-ttttGTCC-----------------------------AGAAAA-------------------CTTAAAAAATAATTTTAATTTTGAAGATAA-------- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249594 86 + 83442489 tacctatcaaatagaagtcaacccagaacatattagttc-ttt-ttttGTCC-----------------------------AGAAAA-------------------CTTAAAAAATAATTTTAATTTTGAAGATAA-------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096534 84 + 4267968 ---ctatcaaatagtaggcaacctagaacatattagttctttt-tttTGTCC-----------------------------AGAAAA-------------------CTttaaaaataattttaatattgaagataa-------- i gorGor5.CYUI01015385v1 C 0 I 3 s nomLeu3.chrUn_GL397460_1 2081639 86 - 2193130 tacctatcaaatagaagtcaacccagaacatattagttc-ttt-ttttGTTC-----------------------------AGAAAT-------------------CTTAAAAAATAATTTTAATTTTGAAGATAA-------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s manLeu1.NW_012106252v1 2201181 80 + 4244037 tgcccatcatatagcaggcaatcCAGAACATATTAGTG--TTT-GTTTGTTC-----------------------------AGAAAA-------------------TTCC-----CAAGTTTAATGTTGAAGATAA-------- i manLeu1.NW_012106252v1 C 0 T 27175 s saiBol1.JH378271 1866237 80 + 3513951 TACCCATGAAATAGTAGGCAACCCAGGACATATTAGTTG--TT-TTTTGTCC-----------------------------ATAGAA-------------------CTTC-----TAGTTTTAATGTTGAAGATAA-------- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912129 81 + 1920343 tgcccatgaaatagtaggtaacctaggacatattagttg-ttt-ttTTGTCC-----------------------------ATAGAA-------------------CTTC-----TAGTTTTAATGTTGAAGATAA-------- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020555 86 - 7032639 tatctatcaaatggtaggcaacctagaacatgttagctc-ttt-ttttGTTC-----------------------------AGAAAA-------------------CTTTAAAAATGATTTTAATATTGAAGATAA-------- i aotNan1.NW_018502359v1 I 393 C 0 s dasNov3.JH570468 497695 143 - 852752 tatgtagtgaacagAGGACAACCCAGAACATTTTAATTC-TTCATCTTATTCACCCCATCCTTCATCAAGAATCAGCAGGTAGAAAGCACAGATACTTGGCTGTCCCTTCAAAACACATATTATTTTCTGGTGTCCTTCCCTCA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e chlSab2.chr16 64933943 439 + 75148670 I e cerAty1.NW_012006043v1 1989321 439 - 8458610 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=6504.000000 s hg38.chr17_JH159148v1_alt 33957 2 + 88070 TA s panTro5.chr17 16345059 2 + 83181570 TA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249680 2 + 83442489 TA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096621 2 + 4267968 ta i gorGor5.CYUI01015385v1 I 3 C 0 s nomLeu3.chrUn_GL397460_1 2081725 2 - 2193130 TA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989760 2 - 8458610 TA i cerAty1.NW_012006043v1 I 439 C 0 s chlSab2.chr16 64934382 2 + 75148670 TA i chlSab2.chr16 I 439 C 0 s manLeu1.NW_012106252v1 2174086 2 + 4244037 TA i manLeu1.NW_012106252v1 T 27175 C 0 s saiBol1.JH378271 1866317 2 + 3513951 GA i saiBol1.JH378271 C 0 I 3 s cebCap1.NW_016107730v1 1912210 2 + 1920343 GA i cebCap1.NW_016107730v1 C 0 I 118 s aotNan1.NW_018502359v1 7020641 2 - 7032639 GA i aotNan1.NW_018502359v1 C 0 I 3 s dasNov3.JH570468 497838 2 - 852752 TA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=130181.000000 s hg38.chr17_JH159148v1_alt 33959 36 + 88070 TATGTA-TAATAACTAACCAGATCAA---CTAAATTCTTT s panTro5.chr17 16345061 36 + 83181570 TATGTA-TAATAACTAACCAGATCAA---CTAAATTCTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249682 36 + 83442489 TATGTA-TAATAACTAACCAGATCAA---CTAAATTCTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096623 36 + 4267968 tattta-taataaCTAAGTAGATCAA---TTAAATTCTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081727 36 - 2193130 TATGTA-TAATAACTAACTAGATCAA---TTAAATTCTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989762 36 - 8458610 TATTTA-TAATAACTAACTAGATCAA---CTAAATTCTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934384 36 + 75148670 TATTTA-TAATAACTAACTAGATCAA---CTAAATTCTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174088 36 + 4244037 TATTTA-TAATAACTAACTAGATCAA---CTAAATTCTTT i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1866322 36 + 3513951 CATGAA-TCATAATTAACTAGATTAA---CTAACTTCCTt i saiBol1.JH378271 I 3 C 0 s aotNan1.NW_018502359v1 7020646 36 - 7032639 TATTTA-TAATAACTAACTAGATCAA---CTAAATTCttt i aotNan1.NW_018502359v1 I 3 I 51 s dasNov3.JH570468 497840 40 - 852752 TATGTACTGGTGACTCATCAGAGGTACTTCTAAAGTCTCT i dasNov3.JH570468 C 0 I 142 e mm10.chr11 22135123 10168 - 122082543 I e cebCap1.NW_016107730v1 1912212 118 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=116649.000000 s hg38.chr17_JH159148v1_alt 33995 42 + 88070 Ctttactagcttttttgaggtataattaacaaataaaaattg------ s panTro5.chr17 16345097 42 + 83181570 Ctttactagcttttttgaggtataattaacaaataaaaattg------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249718 42 + 83442489 Ctttactagcttttttgaggtataattaacaaataaaaattg------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4096659 42 + 4267968 CTTCActagctttattgaggtataattaacaaataaaaatta------ i gorGor5.CYUI01015385v1 C 0 I 311 s nomLeu3.chrUn_GL397460_1 2081763 42 - 2193130 Ctttactagcttttttcaggtataattaacaagtaaaaattg------ i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989798 42 - 8458610 Ctttactagctttattggggtataattaacaaataaaaattg------ i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934420 42 + 75148670 Ctttactagctttattgaggtataattaacaaataaaaattg------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174124 42 + 4244037 Ctttactagctttattgaggtataattaacaaataaaaattg------ i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1866358 47 + 3513951 -tttactagctttattgaggcactactgacaaataaaaataaaaattg i saiBol1.JH378271 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7020682 51 - 7032639 I e cebCap1.NW_016107730v1 1912212 118 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 497880 142 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=62210.000000 s hg38.chr17_JH159148v1_alt 34037 24 + 88070 tgtatatgtaaggtataaaaggtt s panTro5.chr17 16345139 24 + 83181570 tgtatgtgtaaggtataaaaggtt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249760 24 + 83442489 tgtatgtgtaaggtataaaaggtt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097012 24 + 4267968 tgtatatgtaaggtataaaaggtt i gorGor5.CYUI01015385v1 I 311 C 0 s nomLeu3.chrUn_GL397460_1 2081805 24 - 2193130 tgtatgtgtaagttataaaaggtt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989840 24 - 8458610 tgtatatttaaggtataaaaggtt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934462 24 + 75148670 tgtatatttaaggtataaaaggat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174166 24 + 4244037 tgtatatttaaggtataaaaggta i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1866405 24 + 3513951 tgtatatttaatgtgtatgaggtg i saiBol1.JH378271 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7020682 51 - 7032639 I e cebCap1.NW_016107730v1 1912212 118 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 497880 142 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46147053 386 - 159171411 T e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=33070.000000 s hg38.chr17_JH159148v1_alt 34061 8 + 88070 atgtttt--g s panTro5.chr17 16345163 8 + 83181570 atgtttt--g i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249784 8 + 83442489 atgtttt--g i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097036 8 + 4267968 atgtttt--g i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081829 8 - 2193130 atgtttt--g i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989864 8 - 8458610 atgtttt--g i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934486 8 + 75148670 atgtttt--g i chlSab2.chr16 C 0 I 2 s manLeu1.NW_012106252v1 2174190 8 + 4244037 atgtttt--g i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5 46146667 8 - 159171411 atgtttt--g i calJac3.chr5 T 386 C 0 s saiBol1.JH378271 1866429 10 + 3513951 ttgtttcagg i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7020733 8 - 7032639 atgtttt--g i aotNan1.NW_018502359v1 I 51 C 0 e mm10.chr11 22135123 10168 - 122082543 I e cebCap1.NW_016107730v1 1912212 118 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 497880 142 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=18931.000000 s hg38.chr17_JH159148v1_alt 34069 4 + 88070 atat s panTro5.chr17 16345171 4 + 83181570 atat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249792 4 + 83442489 atat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097044 2 + 4267968 --at i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081837 4 - 2193130 atat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989872 4 - 8458610 atat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934496 4 + 75148670 atat i chlSab2.chr16 I 2 C 0 s manLeu1.NW_012106252v1 2174198 4 + 4244037 atat i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5 46146675 4 - 159171411 atac i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866439 4 + 3513951 atat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912330 4 + 1920343 atat i cebCap1.NW_016107730v1 I 118 C 0 s aotNan1.NW_018502359v1 7020741 4 - 7032639 atac i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 497880 142 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=911240.000000 s hg38.chr17_JH159148v1_alt 34073 197 + 88070 atatattcattgtgaaataatcacatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgggaatatttaagatccactttctcag---------------caaatttcaggtgtacaaaaaagtatttt---aaactatatccaaattagt------gtacaccagatctg-caaaacttatttgtctta-------tataactgaTGTAGGTCAA s panTro5.chr17 16345175 197 + 83181570 atatattcactgtgaaataatcacatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgggaatatttaagatccactttctcag---------------caaatttcaggtgtacaataaagtatttt---aaactatatccaaattagt------gtacaccagatctg-caaaacttatttgtctta-------tataactgaTGTTGGTCAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249796 197 + 83442489 atatattcactgtgaaataatcacatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgggaatatttaagatccactttctcag---------------caaatttcaggtgtacaataaagtatttt---aaactatatccaaattagt------gtacaccagatctg-caaaacttatttgtctta-------tataactgaTGTTGGTCAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097046 204 + 4267968 gtatattcattgtgaaataatcgcatatttattagctcacatagctaaccatttcctttttattt--------------ttgtggtgggaacatttaagatccatgttctcag---------------caaatttcaggtatacagtgaagtatttt---aaactatatccacattagttctgcagtacaccagatctg-cagaacttattcacctta-------tacaactgaTGTTGGTCAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2081841 197 - 2193130 atatattcattgtgaaataatcacatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgggaacatttaagatccactttctcag---------------caaatttcaggtatacaataaagtatttt---aaactatatccacattagt------gtacaccagatctg-cagaacttatctgtctta-------tataactgaTGTTGGTCAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1989876 197 - 8458610 atatattcattgtgaaataatcatatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgtgaacacttaagatccactttctcag---------------caaatttcaggtatacaataaagtatttt---aaactatatccacattaga------gtgcaccagatctg-cagaacttattcatctta-------tataactgaTGTTGGTCAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934500 197 + 75148670 atatattcattgtgaaataatcatatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgtgaacacttaagatccactttctcag---------------caaatttcaggtatacaataaagtatttt---aaactatatccacgttaga------gtgcaccagatctg-cagaacttattcatctta-------tataactgaTGTTGGTCAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174202 197 + 4244037 agatattcattgtgaaataatcatatatttattagctcacatagtt-accatttcctttttattt--------------ttgtggtgtgaacacttaagatccactttctcag---------------caaatttcaggtatacaataaagtatttt---aaactatatccacattaga------gtgcaccagatctg-cagaacttattcatctta-------tataactgaTGTTGGTTAT i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5 46146679 189 - 159171411 atatattcattgtgaaataatcacatatttattaactcacatggtt-accatttcctttttattt--------------ttgtggtgtgaaca-tttaagacaactttctcag---------------caaatttcaggtctacagtaaagtatttt----------atccacattagt------gtacaccagatctg-cagaacttattcatcata-------tataactgaTGTTGGCCAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866443 200 + 3513951 atatatttattgtaaaatcataatatattccttagctcacgtagtt-acaatttccttttcactt--------------ttatggtgtgaacagctcaggtctaccttcttag---------------aaaatttcaggtatacaataaaacattgttgttcactaaagtcacgttgtt------gtacactagatctg-cagaagttactcatcttg-------cgatactgaTGTTGGTCAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912334 200 + 1920343 atatatttattgtgaaatcatagtatattccttacatcacgtagtt-acaatttccttttcattt--------------ttatggcgtgaacacctcagatctaacttcttag---------------caaatttcttgtatacaataaaacatttttgttaactacagccatgttgtt------gtacactagatctg-cagaagttactcatcttg-------caaaactgaTGTTGGTCAA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020745 190 - 7032639 atatattcactgtgaaataatcacatatttatttactcacatggtt-accatttcctttttattt--------------ttgtggtgtgaatatttgagataaactttctcag---------------caaatttcaggtgtacagtaaagtgtttt----------atccacattagt------gtacaccagatctg-cagaagttattcatcgta-------tataactgaTGTTGGCCAA i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 498022 206 - 852752 ATATGTTTCCCATGCAAACATGAGCTTTTATTTTCCTCAGATACTT--------CCTTTTTACCTCCAGAAAACAGAGGTGGTGGTTTAGTTTCCTTAG----ACCTTCTAGGGAGTGTGAATCGATCAAAGTGACACATGCATGTTGTATTGTTTT------------------TAGT------GGCCA--AGGTTTGTCCTTAATTACTTTTCTTAGTGATGCTTTGATTAATATAAATTGA i dasNov3.JH570468 I 142 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e colAng1.NW_012122154v1 2196619 823 + 4569836 I e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=4095.000000 s hg38.chr17_JH159148v1_alt 34270 1 + 88070 A s panTro5.chr17 16345372 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249993 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097250 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082038 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s calJac3.chr5 46146868 1 - 159171411 A i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866643 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912534 1 + 1920343 A i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020935 1 - 7032639 A i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 498228 1 - 852752 A i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e manLeu1.NW_012106252v1 2174399 0 + 4244037 C e otoGar3.GL873537 22862060 5348 + 28711273 I e colAng1.NW_012122154v1 2196619 823 + 4569836 I e chlSab2.chr16 64934697 0 + 75148670 C e cerAty1.NW_012006043v1 1990073 0 - 8458610 C e macNem1.NW_012014910v1 2119400 14636 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30137556 2247 - 77216781 T a score=285307.000000 s hg38.chr17_JH159148v1_alt 34271 39 + 88070 -GAGAATGTGCTAG--------------------------------TTCTTCGTCTCCTTTACCCCATCACC s panTro5.chr17 16345373 39 + 83181570 -GAGAATGTGCTAG--------------------------------TTTTTCATCTCTTTTACCCCATCACC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16249994 39 + 83442489 -GAGAATGTGCTAG--------------------------------TTTTTCATCTCTTTTACCCCATCACC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097251 39 + 4267968 -GAGAATGTGCTAC--------------------------------TTCTTCGTCTCCTTTACCCCATCACC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082039 39 - 2193130 -GAGAATGTGCTAG--------------------------------TTCTTCATCTCCTTTACCCCAACACC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135309 39 - 77216781 -GAAAATGTGCTTG--------------------------------GTCTTTGTCTCCTTTACCCCATCACC i rheMac8.chr16 T 2247 C 0 s macNem1.NW_012014910v1 2104764 39 + 10377808 -GAAAATGTGCTTG--------------------------------GTCTTCGTCTCCTTTACCCCATCACC i macNem1.NW_012014910v1 T 14636 C 0 s cerAty1.NW_012006043v1 1990073 38 - 8458610 -GAAAATGTGCTTG--------------------------------TTCTTTGTC-CCTTTACCCCATCACC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934697 39 + 75148670 -GAAAATGTGCTTG--------------------------------TTCTTTGTCTCCTTTACCCCATCACC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174399 38 + 4244037 -GAAAATGTGCTTG--------------------------------TTCTTTGTC-CCTTTACCCCATCACC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197442 39 + 4569836 -gaaaatgtgctag--------------------------------ttcttcatctcctttaccccatcacc i colAng1.NW_012122154v1 I 823 C 0 s calJac3.chr5 46146869 39 - 159171411 -GAGAATGTGACAG--------------------------------TTCTTTGTCTCCTTTACCCCATCACC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866644 38 + 3513951 --AGAATGTGACAG--------------------------------TTCTTCACCTTCTTTACCCCATCACA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912535 38 + 1920343 --AGAATGTGATAG--------------------------------TTCTTCACCTTCTTTACCCCATCACA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020936 39 - 7032639 -GAGAATGTGATAG--------------------------------TTCTTTGTCTCCTTTACCCCATCACC i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 498229 71 - 852752 TGAAAGT-TGATAGAGAACAGTATCTTGTCTGGGATCAGCAGGGATTTATTTATTTCCTTTTATCCATCAAC i dasNov3.JH570468 C 0 N 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=243692.000000 s hg38.chr17_JH159148v1_alt 34310 30 + 88070 CAACGACTATCCCAGTCAGCGGCTTTTCTC s panTro5.chr17 16345412 30 + 83181570 CAACGACTATCCCAGTCAGCGGCTTTTCTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250033 30 + 83442489 CAACGACTATCCCAGTCAGTGGCTTTTCTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097290 30 + 4267968 CAATGACTATCCCAGTCAGCGGCTTTTCTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082078 30 - 2193130 AAATGACTATCCCAGGCAGCAGCTTTTCTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135348 30 - 77216781 CAGTGACTATCCCAATCAGTGGCTTTTCTC i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104803 30 + 10377808 CAGTGACTATCCCAATCAGTGGCTTTTCTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990111 30 - 8458610 CAGTGACTATCCCAATCAGTGGCTTTTCTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934736 30 + 75148670 CAGTGACTATCCCAATCAGTGGCTTTTCTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174437 30 + 4244037 CAGTGACTATCCCAATCAGTGGCTTTTCTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197481 30 + 4569836 cAGTGACTATCCCAATCAGTGGCTTTTCTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46146908 30 - 159171411 CAATGACTATCACAGTCAGTGGCTTTTCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866682 30 + 3513951 CAATGACTATCACGGTCATTGACCTTTGTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912573 30 + 1920343 CAATGACTATCACAGTCAGTGACTTTTGTC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7020975 30 - 7032639 CAATGACTATCACAGTCAGTGGCTTTTCTC i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=22341.000000 s hg38.chr17_JH159148v1_alt 34340 3 + 88070 TCT s panTro5.chr17 16345442 3 + 83181570 TCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250063 3 + 83442489 TCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097320 3 + 4267968 TCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082108 3 - 2193130 TCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135378 3 - 77216781 TCT i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104833 3 + 10377808 TCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990141 3 - 8458610 TCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934766 3 + 75148670 TCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174467 3 + 4244037 TCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197511 3 + 4569836 TCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46146938 3 - 159171411 TTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866712 3 + 3513951 TGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1912603 3 + 1920343 TCT i cebCap1.NW_016107730v1 C 0 T 5530 s aotNan1.NW_018502359v1 7021005 3 - 7032639 TTT i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 630619 3 - 852752 TCC i dasNov3.JH570468 N 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=455934.000000 s hg38.chr17_JH159148v1_alt 34343 56 + 88070 CTCTGGAATCTTCACAGCATCCC----------AGATATACAGTCTCAAAA---------------GATGGCATCTGTATT s panTro5.chr17 16345445 56 + 83181570 CTCTGGAATCTTCACAGCATCCC----------AGATATACAGTCTCAAAA---------------GATGGCATCTGTATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250066 56 + 83442489 CTCTGGAATCTTCACAGCATCCC----------AGATATACAGTCTCAAAA---------------GATGGCATCTGTATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097323 56 + 4267968 CTCTGGAATCTTCAAAGCATTCC----------AGATATACACTCTCAAAA---------------GATGGTGTCTGTATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082111 56 - 2193130 CTCTGGAATCTTCACAGCATCCC----------AGATATACAGTCTCAAAA---------------GATGGTATCTGCAAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135381 56 - 77216781 TTGAGGAATCTTCAGAGCATTCT----------AGATATGCAGTCTCAAAA---------------GATGGCATCTGTATT i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104836 56 + 10377808 TTCTGGAATCTTCAGAGCATTCT----------AGATATGCAGTCTCAAAA---------------GATGGCATCTGTATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990144 56 - 8458610 TTCTGGAATCTTCAGAGCATTCC----------AGATATACAGTCTCAAAA---------------GATGGCATCTGTATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934769 56 + 75148670 TTCTGGAATCTTCAGAGCATTCC----------ACATATACAGTCTCAAAA---------------GATGGCATCTGTATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174470 56 + 4244037 TTCTGGAATCTTCAGAGCATTCC----------AGATATACAGTCTCAAAA---------------GACGGCATCTGTATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197514 56 + 4569836 TTCTGGAATCTTCAGAGCATTCT----------AGATATACAGTCTCAAAA---------------GATGGCATCTGTATT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46146941 56 - 159171411 TTCTGGAATTTTCAGAGCATACC----------AGAGATACACTCTCAAAA---------------GATGGCATCTGTATT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1866715 56 + 3513951 TAGCTGAGTCTTCAGAGCATTCT----------AGATACACCACCTCAGAA---------------GTTGGCATCTGTCTT i saiBol1.JH378271 C 0 T 10777 s cebCap1.NW_016107730v1 1907076 56 + 1920343 TTCTGGAATTTTCAGAGCATTCC----------AGATATACACTCTCAAAA---------------GATGGCATCTGTATT i cebCap1.NW_016107730v1 T 5530 C 0 s aotNan1.NW_018502359v1 7021008 56 - 7032639 TTCTGGAATTTTCAGAGCATTCC----------AGATACACACTCTCAAAA---------------GATGGCATCTGTATT i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 630622 75 - 852752 CTTTAGAT------GAGCATTCCTAACTTCACACAATGTGGAGTCTCAAAATATGTGATGCTGGTGAATGGCATCCATGTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=69707.000000 s hg38.chr17_JH159148v1_alt 34399 8 + 88070 TTATAAGG- s panTro5.chr17 16345501 8 + 83181570 TTATAAGG- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250122 8 + 83442489 TTATAAGG- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097379 8 + 4267968 TTATAAGG- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082167 8 - 2193130 TTATAAGG- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135437 8 - 77216781 TTATAAGG- i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104892 8 + 10377808 TTATAAGG- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990200 8 - 8458610 TTATAAGG- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934825 8 + 75148670 TTATAAAG- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174526 8 + 4244037 TTATAAGG- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197570 8 + 4569836 TTATAAGG- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46146997 8 - 159171411 TTATAATG- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1855994 8 + 3513951 TTATAAGG- i saiBol1.JH378271 T 10777 C 0 s cebCap1.NW_016107730v1 1907132 8 + 1920343 TTATAAGG- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021064 8 - 7032639 TTATAAGG- i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 630697 8 - 852752 -TGGAAAGA i dasNov3.JH570468 C 0 I 102 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=393122.000000 s hg38.chr17_JH159148v1_alt 34407 48 + 88070 AATAATTTAAGTTCATTTTGCCTTGTCAATATGTATTCAGGAGAAGAA s panTro5.chr17 16345509 48 + 83181570 AATAACTTAAGTTCATTTTGCCTTGTCAATAGGTATTCAGGAGAAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250130 48 + 83442489 AATAACTTAAGTTCATTTTGCCTTGTCAATAGGTATTCAGGAGAAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097387 48 + 4267968 AATAACTTAAGTTCATTTTGTTTTGTCAATATGTATTCAGGAGAAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082175 48 - 2193130 AATAACTTAAGTTCGTTTTGCCTTGTCAATATGTATTCAGGAGAAGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135445 48 - 77216781 AATAACTTAAGTTCCTTTTGTTTTGTCAATATGTTTTCAGGAGAAGAA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104900 48 + 10377808 AATAACTTAAGTTCCTTTTGTTTTGTCAATATGTTTTCAGGAGAAGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990208 48 - 8458610 AATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTCAGGAGAAGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934833 48 + 75148670 AATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTCAGGAGAAGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174534 48 + 4244037 AATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTCAGGAGAAGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197578 48 + 4569836 AATAACTTAAGTTCCTTTTGTTTTGTCAATATGTATTCAGGAGAAGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147005 48 - 159171411 AATAACTTAAGTTTATTCTGCTGTGTCGATATGTATTCAAGAGAAGAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1856002 48 + 3513951 AACAACTGAAGTTTATTTTGCTGTGTCGAAATGTATTCAAGAGAAGAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907140 48 + 1920343 AATAACTTGAGTTTATTTTGCTATGTCGATATGTATTCaagagaagaa i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021072 48 - 7032639 AATAACTTAAGTTTATTTTGCTGTGTCGATATGTATTCaagagaagaa i aotNan1.NW_018502359v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e dasNov3.JH570468 630705 102 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=37440.000000 s hg38.chr17_JH159148v1_alt 34455 4 + 88070 -GAAG s panTro5.chr17 16345557 4 + 83181570 -GAAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250178 4 + 83442489 -GAAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097435 4 + 4267968 -GAAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082223 4 - 2193130 -GAAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135493 4 - 77216781 -GAAG i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104948 4 + 10377808 -GAAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990256 4 - 8458610 -GAAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934881 4 + 75148670 -GAAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174582 4 + 4244037 -GAAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197626 4 + 4569836 -GAAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147053 4 - 159171411 -GAAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1856050 4 + 3513951 -GAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907188 4 + 1920343 -gaag i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021120 4 - 7032639 -gaag i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 630807 4 - 852752 GGAA- i dasNov3.JH570468 I 102 N 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=20055.000000 s hg38.chr17_JH159148v1_alt 34459 2 + 88070 GA s panTro5.chr17 16345561 2 + 83181570 GA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250182 2 + 83442489 GA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097439 2 + 4267968 GA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082227 2 - 2193130 GA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135497 2 - 77216781 GA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104952 2 + 10377808 GA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990260 2 - 8458610 GA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934885 2 + 75148670 GA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174586 2 + 4244037 GA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197630 2 + 4569836 GA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147057 2 - 159171411 GA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1856054 2 + 3513951 GA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907192 2 + 1920343 ga i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021124 2 - 7032639 ga i aotNan1.NW_018502359v1 C 0 I 409 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=37042.000000 s hg38.chr17_JH159148v1_alt 34461 5 + 88070 AGCCA s panTro5.chr17 16345563 5 + 83181570 AGCCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250184 5 + 83442489 AGCCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097441 5 + 4267968 GGCCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082229 5 - 2193130 GGCTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135499 5 - 77216781 GGCCA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104954 5 + 10377808 GGCCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990262 5 - 8458610 GGCCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934887 5 + 75148670 GGCCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174588 5 + 4244037 GGCCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197632 5 + 4569836 GGCCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147059 5 - 159171411 GGCCA i calJac3.chr5 C 0 I 156 s saiBol1.JH378271 1856056 5 + 3513951 GGCCA i saiBol1.JH378271 C 0 I 11405 s cebCap1.NW_016107730v1 1907194 5 + 1920343 ggcca i cebCap1.NW_016107730v1 C 0 I 262 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7021126 409 - 7032639 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=20020.000000 s hg38.chr17_JH159148v1_alt 34466 4 + 88070 TATA s panTro5.chr17 16345568 4 + 83181570 TATA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250189 4 + 83442489 TATA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097446 4 + 4267968 TATA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082234 4 - 2193130 TATA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135504 4 - 77216781 TATA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104959 4 + 10377808 TATA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990267 4 - 8458610 TATA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934892 4 + 75148670 TATA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174593 4 + 4244037 TATA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197637 4 + 4569836 TATA i colAng1.NW_012122154v1 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7021126 409 - 7032639 I e cebCap1.NW_016107730v1 1907199 262 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e saiBol1.JH378271 1856061 11405 + 3513951 I e calJac3.chr5 46147064 156 - 159171411 I e macFas5.chr16 28049576 0 - 80997621 C a score=18072.000000 s hg38.chr17_JH159148v1_alt 34470 3 + 88070 AGA s panTro5.chr17 16345572 3 + 83181570 AGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250193 3 + 83442489 AGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097450 3 + 4267968 CGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082238 3 - 2193130 AGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135508 3 - 77216781 AGA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104963 3 + 10377808 AGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990271 3 - 8458610 AGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934896 3 + 75148670 AGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174597 3 + 4244037 AGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197641 3 + 4569836 AGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147220 3 - 159171411 agg i calJac3.chr5 I 156 C 0 s saiBol1.JH378271 1867466 3 + 3513951 AGA i saiBol1.JH378271 I 11405 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7021126 409 - 7032639 I e cebCap1.NW_016107730v1 1907199 262 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=10231.000000 s hg38.chr17_JH159148v1_alt 34473 2 + 88070 AT s panTro5.chr17 16345575 2 + 83181570 AT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250196 2 + 83442489 AT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097453 2 + 4267968 AC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082241 2 - 2193130 AT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135511 2 - 77216781 AT i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104966 2 + 10377808 AT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990274 2 - 8458610 AT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934899 2 + 75148670 AT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174600 2 + 4244037 AT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197644 2 + 4569836 AT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147223 2 - 159171411 ag i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867469 2 + 3513951 AC i saiBol1.JH378271 C 0 C 0 s dasNov3.JH570468 498561 2 - 852752 AC i dasNov3.JH570468 N 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e aotNan1.NW_018502359v1 7021126 409 - 7032639 I e cebCap1.NW_016107730v1 1907199 262 + 1920343 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=8323.000000 s hg38.chr17_JH159148v1_alt 34475 1 + 88070 G s panTro5.chr17 16345577 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250198 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097455 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082243 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135513 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104968 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990276 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934901 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174602 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2197646 1 + 4569836 G i colAng1.NW_012122154v1 C 0 I 5635 s calJac3.chr5 46147225 1 - 159171411 g i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867471 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907461 1 + 1920343 g i cebCap1.NW_016107730v1 I 262 C 0 s aotNan1.NW_018502359v1 7021535 1 - 7032639 g i aotNan1.NW_018502359v1 I 409 C 0 s dasNov3.JH570468 498563 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=12000.000000 s hg38.chr17_JH159148v1_alt 34476 1 + 88070 G s panTro5.chr17 16345578 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250199 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097456 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082244 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135514 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2104969 1 + 10377808 G i macNem1.NW_012014910v1 C 0 I 16881 s cerAty1.NW_012006043v1 1990277 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934902 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174603 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203282 1 + 4569836 G i colAng1.NW_012122154v1 I 5635 C 0 s calJac3.chr5 46147226 1 - 159171411 G i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867472 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907462 1 + 1920343 G i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021536 1 - 7032639 G i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 498564 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=10920.000000 s hg38.chr17_JH159148v1_alt 34477 1 + 88070 A s panTro5.chr17 16345579 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250200 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097457 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082245 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30135515 1 - 77216781 A i rheMac8.chr16 C 0 I 2040 s macNem1.NW_012014910v1 2121851 1 + 10377808 A i macNem1.NW_012014910v1 I 16881 C 0 s cerAty1.NW_012006043v1 1990278 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934903 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174604 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203283 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147227 1 - 159171411 A i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867473 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907463 1 + 1920343 A i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021537 1 - 7032639 A i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 498565 1 - 852752 A i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C a score=58974.000000 s hg38.chr17_JH159148v1_alt 34478 7 + 88070 AATGTTA s panTro5.chr17 16345580 7 + 83181570 AATGTTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250201 7 + 83442489 AATGTTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097458 7 + 4267968 AATGTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082246 7 - 2193130 AATGTTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121852 7 + 10377808 AATGTTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990279 7 - 8458610 AACGTTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934904 7 + 75148670 AACGTTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174605 7 + 4244037 AACGTTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203284 7 + 4569836 AATGTTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147228 7 - 159171411 AATGTTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867474 7 + 3513951 AATGTTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907464 7 + 1920343 AATGTTA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021538 7 - 7032639 AATGTTA i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 498566 7 - 852752 AACATTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e canFam3.chr9 39587489 2283 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=84701.000000 s hg38.chr17_JH159148v1_alt 34485 12 + 88070 TCTGCAAATACA-- s panTro5.chr17 16345587 12 + 83181570 TCTGCAAATACA-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250208 12 + 83442489 TCTGCAAATACA-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097465 12 + 4267968 TCTGAAAATACA-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082253 12 - 2193130 TCTGCAAATACA-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121859 12 + 10377808 TCTGCCAATATA-- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1990286 12 - 8458610 CCTGCAAATACA-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64934911 12 + 75148670 CCTGCAAATACA-- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2174612 12 + 4244037 CCTGCAAATACA-- i manLeu1.NW_012106252v1 C 0 I 16645 s colAng1.NW_012122154v1 2203291 12 + 4569836 TCTGTAAATATG-- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147235 12 - 159171411 TCTGCAAATACA-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867481 12 + 3513951 TCTGCAAACATG-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907471 12 + 1920343 TCAGCAAATACA-- i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021545 12 - 7032639 TCTGCAAATACA-- i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 39589772 12 - 61074082 TCTGCATATATG-- i canFam3.chr9 I 2283 C 0 s dasNov3.JH570468 498573 11 - 852752 ---ACTGATACACA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=94358.000000 s hg38.chr17_JH159148v1_alt 34497 12 + 88070 --GGAGATTATTCC s panTro5.chr17 16345599 12 + 83181570 --GGAGATTATTCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250220 12 + 83442489 --GGAGATTATTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097477 12 + 4267968 --GGAGATTATTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082265 12 - 2193130 --GGAGATTATTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121871 12 + 10377808 --AGTGATTAATCC i macNem1.NW_012014910v1 C 0 T 6844 s cerAty1.NW_012006043v1 1990298 12 - 8458610 --GGAGATTATTCC i cerAty1.NW_012006043v1 C 0 I 16105 s chlSab2.chr16 64934923 12 + 75148670 --GGAGATTATTCC i chlSab2.chr16 C 0 I 10452 s manLeu1.NW_012106252v1 2191269 12 + 4244037 --GGAGATTATTCT i manLeu1.NW_012106252v1 I 16645 I 1 s colAng1.NW_012122154v1 2203303 12 + 4569836 --AGAGATTATACC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147247 12 - 159171411 --GGAGGTTATTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867493 12 + 3513951 --AGAGATTATACC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907483 12 + 1920343 --GGAGGTTATTCC i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021557 12 - 7032639 --GGAGGTTATTCC i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 39589784 12 - 61074082 --AGGGATTGTTTC i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 498584 14 - 852752 AAAGTTATTATTTC i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=76201.000000 s hg38.chr17_JH159148v1_alt 34509 16 + 88070 TCCATTGTTA---AGTAAA s panTro5.chr17 16345611 16 + 83181570 TCCATTGTTA---AGTAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250232 16 + 83442489 TCCATTGTTA---AGTAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097489 13 + 4267968 TCC---GTTA---AGTCAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082277 16 - 2193130 TCCATTGTTA---AGTCAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115039 16 + 10377808 TCCATTGTTA---AATAAA i macNem1.NW_012014910v1 T 6844 C 0 s cerAty1.NW_012006043v1 2006415 16 - 8458610 TCCATTGTTA---AATAAA i cerAty1.NW_012006043v1 I 16105 C 0 s chlSab2.chr16 64945387 16 + 75148670 TCCATTGTTA---AATAAA i chlSab2.chr16 I 10452 C 0 s manLeu1.NW_012106252v1 2191282 16 + 4244037 TCCATTGCTA---AATAAA i manLeu1.NW_012106252v1 I 1 C 0 s colAng1.NW_012122154v1 2203315 16 + 4569836 TCCCACGTTA---AATAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147259 16 - 159171411 TCTATTGATG---AGTAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867505 15 + 3513951 GCCCATGTTC---AAT-AA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907495 16 + 1920343 TCTATTGATG---AGTAAA i cebCap1.NW_016107730v1 C 0 C 0 s aotNan1.NW_018502359v1 7021569 16 - 7032639 TCTATTAATG---AGTAAA i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 39589797 19 - 61074082 TCCATTTGTAAAGAATAAA i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 498598 15 - 852752 --TCTTGCTAA--AATGGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=668963.000000 s hg38.chr17_JH159148v1_alt 34525 106 + 88070 ---CTTAAGTGCATAT---CTTGCTAATGCTGA-GT---C-C-CAATATAG--TTTTTTCTT-TATTGAGAGTTAAATGTAAGTGCCTTTGGACAGAAA-AAAAGACCCAACTTTGCATCTG s panTro5.chr17 16345627 107 + 83181570 ---CTTAAGTGCATAT---CTTGCTAATGCTGA-GT---C-C-CAATATAG--TTTTTTCTT-TATTGAGAGTTAAATGTAAGTGCCCTTGGGCAGAAAGAAAAGACCCAACTTTGCATCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250248 107 + 83442489 ---CTTAAGTGCATAT---CTTGCTAATGCTGA-GT---C-C-CAATATAG--TTTTTTCTT-TATTGAGAGTTAAATGTAAGTGCCCTTGGACAGAAAGAAAAGACCCAACTTTGCATCTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097502 107 + 4267968 ---CTCAAGTCCATGT---CTTGCTAATGCTGA-GT---C-C-CAATGTAA--TTTTTTCTT-TATTGAGAGTTAAATGTATGTGCACTTGGACAGAAAGAGAAGACCCAAGTTTGCATCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082293 109 - 2193130 ---CTTAAGTCCATAT---CTTGTTAATGCTGA-GT---C-C-CAATATAGTTTTTTTTCTT-TATTGAGAGTCAAATGTAAGTGCCCTTGGACAGAAAGAGAAGACCTAACTTTGCATGTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115055 107 + 10377808 ---CTCAAGTGCATAA---CTTGCTAGTGCTGA-GT---C-C-CAATGTCA--TTTCTACTT-TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAATCTTGCATCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006431 107 - 8458610 ---CTCAAGTGCATAA---CTTGCTAGTGCTGA-GT---C-C-CAATGTCA--TTTCTACTT-TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAATCTTGCATCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945403 107 + 75148670 ---CTCAAGTGCATAA---CTTGCTAGTGCTGA-GT---C-C-CAATGTCA--TTTCTACTT-TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAGTCTTGCATCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191298 107 + 4244037 ---CTCAAGTGTGTAA---CTTGCTAGTGCTGA-GT---C-C-CAATGTCA--TTTCTACTT-TATTGAGAGTTAATTGTAAGTGTCTTTGGGCAGAAAGAGAAAATGCAATCTTGCATCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203331 107 + 4569836 ---CTTAAGTGCATGT---CTTGCTCTTGCTGA-CT---C-C-CGATATCA--TTTCTACTT-TACTGAGAGTTAAATGTAAATGTTCTTGGGTGGAAAGAGAAGCTCTCCCCTTGGACCAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147275 108 - 159171411 ---ATTAAGTGCATGT---CTTGCTAATGCTGACATGCAC-T-TAATGTGA--TTTTTACTT-TATTG--AGTTAAAGGTAAGTGCCCTTTAACAGAAGGAGAAGGCCACACCTTGT-TCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867520 107 + 3513951 ---ACTCAGTGCATGT---CTGTTTCTTACTGA-AT---C-C-CAATATCA--TTTCTACCT-TACTGAAAGTTATATAGGAGAGTTCTTGGGCAGAAAGAGAAGATCTCACCTTGGACCTG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907511 105 + 1920343 ---ATTAAGTGCATGT---CTTGCTAATGCTGA-GT---C-C-CAATGTAA--TTTTTACTT-TATTG--AGTTAAATGTAAGTGCCCTTGGACAGAAAGAGAGGACGACACCTTGCATCTG i cebCap1.NW_016107730v1 C 0 I 5990 s aotNan1.NW_018502359v1 7021585 105 - 7032639 ---ATTAAGTGCATGT---CTTGCTAATGCTGA-GT---C-C-CAATGTAA--TTTTTACTT-CATTG--AGTTAAATGTAAGTGCCCTTGGACAGAAAGATAGGACCATACCTTGCATCTG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867408 109 + 28711273 ---CTCAAGTGCACAG---CTCACCAGTTCTCA-TT---CTC-CAGTAGCA--GTTCTAGTTGCTTTGAGATGGACATGCAGGTGCCCTTGAGCAGACACCGCAGACCCAGTCCTGGATGTC i otoGar3.GL873537 I 5348 C 0 s canFam3.chr9 39589816 108 - 61074082 ---TACATTTGCATAG---CTTACTAGTGTTCA-GT--AC-T-AAATATTA--TTGCTACTTCTATTGACATGTCAATGTGT-TGCCTTTGAGCAGGAACAAATGATCCAATCCTGTATCTA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 498613 115 - 852752 ATTCAGAAGTTCTTGTTCCTCTACTAGCCCTCG-GT---C-TGCAGCACCA--TTTCTCCTTTCACTGAGGTGGAAGTGTAAGAGACCTCCACCAGAAACAGAAGATTCAGTTCTGGATCTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=1099424.000000 s hg38.chr17_JH159148v1_alt 34631 153 + 88070 AGTCTGTCCATTTTTAGCTAAATAACATCACACATTAAAATTTTTTCAGCTG--GAAAGTGGAGGTAATAAAACATGACTGTCTGTTTTGATAATCAAATTAGGTAACAT-----------ACATGGTATGCAATATGTGTGTAAA-TC-CCATATCAGGAATGCTGT s panTro5.chr17 16345734 153 + 83181570 AGTCTGTCCATTTTTAGCTAAATAACATCACACATTAAaattttctcagctg--gaaagtggaggtaataaaatatgactgtctgttttgataatcaaattagataacat-----------acatgGTATGCAATATGCGTGTAAA-TC-CCATATCAGGAATGCTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250355 153 + 83442489 AGTCTGTCCATTTTTAGCTAAATAACATCACACATTAAaattttctcagctg--gaaagtggaggtaataaaacatgactgtctgttttgataatcaaattaggtaacat-----------acgtgGTATGCAATATGCGTGTAAA-TC-CCGTATCAGGAATGCTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097609 153 + 4267968 AGTCTGTCCATTATTAACTAAATAATATCACACATTAAAATTTTCTCAGCTG--GAAAGTGGAAGTAATACAACATGACTGTTTGTTTTGATAATCAAATTAGGTAACAT-----------ATATGGTATGCAATATGTGTGTAAA-TT-CTATATCAGGAATGCCTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082402 153 - 2193130 AGTCTGTCCATTTTTAGCTAAATAATATTACGCATTAAaattttctcagctg--gaaagtggagataataaaacatgactgtctgttttgataatcaaattaggtaacat-----------atatgGTATGCAATATGTGTGTAAA-TC-CCATATCAGGAATGCTGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115162 153 + 10377808 AGTCTGTCCACTGTTAGCTACATAACATCACACATTAAAATTTTCCCAGTTG--GAAAATGGAGGCAATAATACACTACTGTCTGTTTTGAGAATCAAATTGGGTAATAC-----------ATACAGTAGGTGATATATGCGTAAA-TC-CCATATCAGGAATGCTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006538 153 - 8458610 AGTCTGTCCACTGTTAGCTACATAACATCACACATTAAaattttcccagttg--gaaaatggaggcaataatacactactgtctgttttgagaatcaaattgggtaatac-----------atataGTAGGTGATACATGCATGAA-TC-CCATATCAGGAATGCTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945510 153 + 75148670 AGTCTGTCCACTGTTAGCTACATAACATCACACATTAAaattttcccagttg--gaaaatggaggcaataatacactactgtccgttttgagaatcaaattgggtaatac-----------atataGTAGGTGATACATGCGTAAA-TC-CCATATCAGGAATGCTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191405 153 + 4244037 AGTCTGTCCACTGTTAGCTACATAACATCACACATTAAaattttcccagttg--gaaaatggaggcaataatacactactgtctgttttgagaatcaaattgggtaatat-----------atataGTAGGTGATACATGCGTGAA-TC-CCATATCAGGAATGCTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203438 164 + 4569836 AGTCTGTCCTTTATTAGCTACGTAAAATCACACATTAAATTGttctcagctg--aaaaattgaggtaataatacatgactgtctgttttcagaatcaaattggataatacatataGTACATATATAGTATGCAATATGCATGTAAA-TC-CCATATCAACAATTCTGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147383 153 - 159171411 AGTCTGTCCATTATTAGCTAAATAACATCACACATTAAAATTTTCTCAGCTG--GAAAGTAAAGGTAATAAAACATGACTGTCTGTTTTGATAATCAAATTAGGAAGCAT-----------ATATAGTACACAACATGTGTGTAAA-TC-CCCCATCAGGAATGCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867627 153 + 3513951 AGTCTGTCCCTTATTAGCTACATCAAATCACACACTAAATTGTTCTCGGTTG--AAAAATTGAGGTAATAACACATGAGCATCTGTTTTCAGAATCAAATTGGATATTAC-----------ATATAGCATGTGATACGTGTGTGGA-CC-ATTTATCAGGAATTCTGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1913606 153 + 1920343 AGTCTGTCCTTTTTTAGCTACATCAAATCACACAATAAATTGTTCTCAGCTG--AAAAACTGAGGGAATAACACATGACCATCTGTTGTCAGAATCAAATTGGATAATAC-----------GTATAGCATGCAATGTGTGTGTAAA-TT-CCTTTTCAGCAATTCTGT i cebCap1.NW_016107730v1 I 5990 C 0 s aotNan1.NW_018502359v1 7021690 153 - 7032639 AGTCTGTCCATTATTAGGTAAATAACATCACACATTAAAATTTTCTCAGCTG--GAAAGTAAAGGTAATAAAACATGACTGTCTGTTTTTGTAATCAAATTAGGTAACAT-----------ATATGGTACACAATATGTGTGTAAA-TC-CCCTATCAGGAATGCTGT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867517 155 + 28711273 AGTGTGACTATTATTCACTACAAGACATTATGCTATGAAGTTTTCTCATCTGAAAAAAATGATATTAACAATACAAGGGTAACTGTATTGAAAAGAAAAATGGATAATAT-----------ATATGGCATGCCATACGTATACAAG-TTGCTGTATCAGAAA-GAAGT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 39589924 152 - 61074082 AGTTTATC-ATTATTAACTACATTAAATTACACAGTGAAATATTATCA-CTT--TAAAATGTAGAATATAATTCATGACAGGCTGTTGTGTAGCTCAGGTCAGATAATGC-----------ATATTGTACCCAATATGTATATAAGTTC-CTATATTGGGAATATTGT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 498728 148 - 852752 AGTCTGTGCATTTTTACCTACATGATTTAACACAAATCAATTTTC-AAATCA--GAAGGGAGAGGCAGTATGTACTGGGTGACTTTTATGAGGCAGTGAATATGTAATGC-----------TTATGG-----GATATGTATATAAAGCC-CTATATCAGAAAGGCCAT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22135123 10168 - 122082543 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=362683.000000 s hg38.chr17_JH159148v1_alt 34784 59 + 88070 --AAAATAAA-AAAAAA--------CACCATGTGA------TAA---GAAGAATGGTTTTGAGTTTATT----AAGAAACATA s panTro5.chr17 16345887 58 + 83181570 --AAAAT-AA-AAAAAA--------CACCATGTGA------TAA---GAAGAATGGTTTTGAGTTTATT----AAGAAACATA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250508 56 + 83442489 --AAAAT----AAAAAA--------CACCATGTGA------TAA---GAAGAATGGTTTTGAGTTTATT----AAGAAACGTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097762 60 + 4267968 --AAAAT-AA-AAAAAACC------CACCATGTTA------GAT---GAAGAACAGTTTTGAGTTTATT----AAGAAACATA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082555 58 - 2193130 --AAAAT-AA-AAAAAA--------CACTATGTGA------TAT---GAAGAAAGGTTTTGAGTTTATT----AAGAAACATA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115315 63 + 10377808 --CAAATAAA-ACAAAG--------CACCATATGT------GAT---GAAGAATGGTTCCGAATTTATTTATTAAGAAATATA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006691 63 - 8458610 --CAAATAAC-ACAAAG--------CACCATATGT------GAT---GAAGAATGGTTCTGAATTTATTTATTAAGAAATATA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945663 63 + 75148670 --CAAATAAA-ACAAAG--------CACCATATGT------GAT---GAAGAATGGTTCCGAATTTATTTATTAAGAAATATA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191558 63 + 4244037 --CAAATAAA-ACAAAG--------CACCATATGT------GAT---GAAGAATGGTTCTGAATTTATTTATTAAGAAATATA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203602 59 + 4569836 --ACAATAAA-ACAAAA--------CACCATATGA------GAT---GAAGGATGGTTCAGAATTTATTC----AGAAACATA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147536 63 - 159171411 --AAAATAAATATAAAACCC-----CACTATGTAA------GAT---GAAGAATGGTTTTGAGTTTATT----AAGAAATATA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867780 59 + 3513951 --AGAATAAA-ACAAAA--------CACCATATGA------GAC---GGAGGATGGTTTAGAATTTATT----GAGAAACATA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1913759 59 + 1920343 --AGAATAAA-ACAAAA--------CACCATATGA------GAT---GGAGGATGGTTCAGAATTTATT----TAGAAACATA i cebCap1.NW_016107730v1 C 0 T 5985 s aotNan1.NW_018502359v1 7021843 68 - 7032639 --AAAATAAATTTAAAAACCCCACTCACTATGTAA------GAT---GAAGAATGGTTTTGAGTTTATT----AAGAAATATA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867672 59 + 28711273 --ACAATGGA-ACAAAA--------CACAACACGA------GAT---GAATAAAGGCTCACAATTTATT----AAGAAATACT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22145291 53 - 122082543 --AAAATATA-ATGACA--------GACAATATGG------AAT---GAATGGCAGCAGAGAGTTTATT----TGAA------ i mm10.chr11 I 10168 C 0 s canFam3.chr9 39590076 59 - 61074082 --ACAGTAAA-ATAAAA--------CACAATATAG------GGT---GAATTATGATATAGCCTTTATT----AAGAAACATA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 498876 69 - 852752 ACAGCAT-AA-GGGAAA--------CATGACATGGATGACTGATACGGATGAATGGCAGAGAATTTATT----TAGAAATGTG i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=644937.000000 s hg38.chr17_JH159148v1_alt 34843 134 + 88070 TATGTAATGGTCCCTGTTTCTAGGGAGAT-AGCCCAAAATGATCATGAAAAGA-------AGGA---TACAAGAAACACGAGGAGGACATTGAAAATGAAAACATGATTGTGAAGATCATTGAT-------------GAGTTGCA-AAAC------------------------------CT------AAGCTTC s panTro5.chr17 16345945 134 + 83181570 TATGTAATGGTCCCTGTTTCTAGGGAGAT-AGCCCAAAGTGATCATGAAAAGA-------AGGA---TACAAGAAACACGAGGAGGACATTGAAAATGAAAACATGATTGTGAAGATCATTGAT-------------GAGTTGCA-AAAC------------------------------CT------AAGCTTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250564 134 + 83442489 TATGTAATGGTCCCTGTTTCTAGGGAGAT-AGCCCAAAGTGATCATGAAAAGA-------AGGA---TACAAGAAACACGAGGAGGACATTGAAAATGAAAACATGATTGTGAAGATCATTGAT-------------GAGTTGCA-AAAC------------------------------CT------AAGCTTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097822 133 + 4267968 TAGGTACGAATCCCTGTTTCTAGGGAGAT-AACCCAAAATGATCATGAAAAGA-------AGGA---TACAAGAACCATGAGGAGGACATTGAAAATGAAAACATGATTGTGAAGATTATTGAT--------------CGTTGCA-AAAC------------------------------CT------AAGTTTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082613 147 - 2193130 TATGTAACGGTCCCTGTTTCTAGGGAGAT-AACCCAAAGTGATCATGAAAAGA-------AGGA---TACAAGAAACACGAGGAGGACATTGAAAATGAAAACATGGTTGTGAAGATTATTCATCACAGTAATCTTCAGGTTGCA-AAAC------------------------------CT------AAGCTTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115378 137 + 10377808 TAGGTAAG-ATTCCTGGTTCTTGGGAGAT-AGCCCAAAGTGATCATTAAAAGAAGGAAGGAGGA---TACAAGAATCATGAATAT---ATTGAAAA-GAAAACATAGTTGTGAAGATTCTTAAT-------------CATTTGCAGAAAC------------------------------TT------AAGTTTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006754 137 - 8458610 TAGGTAAG-ATTCCTGGTTCTCGGGAGAT-AGCCCAAAGTGATCATTAAAAGAAGGAAGGAGGA---TACAAGAATCATGAGTAT---ATTGAAAA-GAAAACATAGTTGTGAAGATTCTTAAT-------------CATTTGCAGAAAC------------------------------TT------AAGTTTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945726 137 + 75148670 TAGGTAAG-ATTCCTGGTTCTCGGGAGAT-AGCCCAAAGTGATCATTAAAAGAAGGAAGGAGGA---TACAAGAATCATGAGTAT---ATTGAAAA-GAAAACATAGTTGTGAAGATTCTTAAT-------------CATTTGCAGAAAC------------------------------TT------AAGTTTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191621 137 + 4244037 TAGGTAAG-ATTCCTGATTCTCGGGAGAT-AGCCCAAAGTGATCATTAAAAGAAGGAAGGAGGA---TACAAGAATCATGAGTAT---ATTGAAAA-GAAAACATAGTTGTGAAGATTCTTAAT-------------CATTTGCAGAAAC------------------------------TT------AAGTTTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203661 142 + 4569836 TAGGTAAGAATTCCTGCTACTAGGGACAT-AGCCCAAAGTTACCATGAAAAGAAGAAAGAAGGG---TAAAAGAACCATGAGCACAAAATTGAAAATGAAAATATGATTGTAAAGGTTGTTGAT-------------CACTTGCAGATAC------------------------------CT------AAGTTTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147599 133 - 159171411 TAGGCAAAAATTCCTGTTTCTAGGGAGAA-AACCAAAAGTGATCATGAAAAGA----AGAAAGA-----TACGAGCCATGAGGAGGACATCGAAAAGGAAA--AAGACTGTGAAGATTATTGAT-------------CACTTACA-AAAA------------------------------CT------AACTTTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867839 141 + 3513951 TAGGTAAGAATCTGTGCTATAAGGGACAT-AGTCCAGAGTTATCATAAAAAGA----AGAAAGAATGGTAAAAAACTGTGAGGAGGAAATTGAAAATGAAAATATGATTGCAAAGATTATGGAT-------------CCATTGCA-GAAA-----------------------------TCT------AAATATT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907833 135 + 1920343 TAGGCAAAAATCCCTGTTTCTAGGGAGAT-AACCAAAAGAAATCATGAAAAGA----AGAAGTA---TACAAGAGCCATGAGGAGGACATTGAAAATGTAA--AAGACTGTGAAGATTATTGAT-------------CACTTACA-AAAA------------------------------CT------AAGTTTC i cebCap1.NW_016107730v1 T 5985 C 0 s aotNan1.NW_018502359v1 7021911 133 - 7032639 TAGGCAAAAATCCCTGTTTCTAGGGAGAT-AAACGAAAGTGATCATGAAAAGA----AGAAGGA---TACAAGAGCCATGAGGAGGACATTGAAAATGAAA----GACTGTGAAGATTATTGAT-------------CACTTGCA-GAAA------------------------------CT------AAGTTTC i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867731 142 + 28711273 TAGATAAGAATGTTTG-------------------------ATGATAAAAAGAAGAAAAAAGGA---TATTAAAAATGTGAGTCA---ATTCAAAAAGAAAGCTTGATTATGATAATGATTGGT-------------CAATATCAGAAACC-ATGAAAAGA--TGAGAGGGTTTGTTTTCCT------AAGTTAC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22145344 119 - 122082543 ---------TTACTTGTTTCTAGTGATACAAATCGGAAGTGAGCA-GAAAGAAGAAAAAGAGTA---CACAAAAATTGGGGGTA----ACCCAGAA-GAAAATACAGGT-TAAATAAAGTTA---------------CATTTTAG-GAAG------------------------------TT------AT----- i mm10.chr11 C 0 T 12731 s canFam3.chr9 39590135 116 - 61074082 TAAGTAAG-ATACTTGCATCTAAAGATGA-AAGC--------------------------AGGA---GA-AAGAACCACGAGCAC---GTTGAAAA-ATATATATAATTATGAAGTTTATTAAT-------------CAGTTTCAGGAAC------------------------------CTATGAAAAAGTTTT i canFam3.chr9 C 0 I 23 s dasNov3.JH570468 498945 162 - 852752 TAGATTAGACTACTTGCATCGAGAAAGGC-AACTCAGAGTGATGATGAGAAGAAGAGAGAATGA---CACAGGAATCATGGGtat---attaaaaataaaa---tatttGTGAAGATAATGGAT-----------------TACAGAAGCTGATGAAAAAAATTATGAGTACTTATTTGCTT------AAGTTAC i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=96435.000000 s hg38.chr17_JH159148v1_alt 34977 14 + 88070 TTGGAGAAAGAGAA s panTro5.chr17 16346079 14 + 83181570 TTGGAGAAAGAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250698 14 + 83442489 TTGGAGAAAGAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097955 14 + 4267968 TTAGAGAAAGAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082760 14 - 2193130 TTAGAGAAAGAGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115515 14 + 10377808 TTAGCTGAGGAGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006891 14 - 8458610 TTAGGTGAAGAGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945863 14 + 75148670 TTAGGTGAAGAGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191758 14 + 4244037 TTAGGTGAAGAGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203803 14 + 4569836 TTAGAAGGAGAGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147732 14 - 159171411 TTAGAGAAAGATAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867980 14 + 3513951 TGAGAAACAGAAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1907968 14 + 1920343 TTAGAGAAAGAGAA i cebCap1.NW_016107730v1 C 0 I 5990 s aotNan1.NW_018502359v1 7022044 14 - 7032639 TTAGAGAAAGAGAA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867873 14 + 28711273 TTAGAGGGAGAGAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22132732 13 - 122082543 TCAGAGAGAAAGA- i mm10.chr11 T 12731 C 0 s canFam3.chr9 39590274 14 - 61074082 TTAGAGGGAACAGA i canFam3.chr9 I 23 C 0 s dasNov3.JH570468 499107 12 - 852752 -TAGAGGTGGTGG- i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=647940.000000 s hg38.chr17_JH159148v1_alt 34991 87 + 88070 TGAAGCTCTTGACTTTAGAGTC-AAG-CTGAGACCATGACT-CAAATTGAAAATACATGAGGCTGGCACATGATCTACA----AGGTATAAAGA s panTro5.chr17 16346093 87 + 83181570 TGAAGCTCTTGACTTTAGAGTC-AAG-CTGAGACCATGACT-CAAATTGGAAATACATGAGGCTGGCACATGATCTACA----AGGTATAAAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250712 86 + 83442489 TGAAGCTCTTGACTTTAGAGTC-AAG-CTGAGACCATGACT-CAAATTGGAAATACATGAGGCTGGCACATGATCTACA----AGGTATAAAG- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4097969 88 + 4267968 CGAAGCTCTTGACTTTAAAGTC-AAG-CTGAGACCATGACTCCAAATTGAAAATACATGAAGGTGGCACATGATCCACA----AGGTGTAAAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082774 88 - 2193130 TGAAGCTCTTGACTTTAGAGTC-AAG-CTGAGACCATCACTCCAAATTGAAAATACATGAGGCTGGCACATGATCTACA----AGGTATAAAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115529 88 + 10377808 TGAAGCTCTTGACTTTAGAGTC-AAAAATGAGATTATGACTCCAAATTGAGAACACACAAAGCTGGCACATGATCCACA----AGGTGTA-AGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006905 88 - 8458610 TGAAGCTCTTGACTTTAGAGTC-AAAGTTGAGATCATGACTCCAAATTGAGAACACACAAAGCTGGCACATGATCCACA----AGGTGTA-AGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945877 88 + 75148670 TGAAGCTCTTGACTTTAGAGTC-AAAGTTGAGATCATGACTCCAAATTGAGAACACACAAAGCTGGCACATGATCCACA----AGGTATA-AGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191772 88 + 4244037 TGAAGCTCTTGACTTTAGAGTC-AAAGTTGAGATCATGACTCCAAATTGAGAACACACAAAGCTGGCATATGATCCACA----AGGTGTA-AGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203817 88 + 4569836 TGAAGCTCTTGACTTTAGAGTC-AAA-TGGAGACCACGACCCCACATTGAGAACACATGAAGCTGGCACATGATCCACA----AGGTGTAGGGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147746 88 - 159171411 TGAAGCTCTTGATTTTAGAGTC-AAG-CTGAGACCATGACTCCAAATTGAAAATACATAAAGCTAGCACATGATCCACA----AAGTGTAAAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1867994 89 + 3513951 TGAAGCTCTTGACTTTAGATTCAAAG-CTGAGACCATGACTCCAAACTGAGAACACAGGCAGCTGGCACATGATCCCCA----AAGTGTAAGGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1913972 89 + 1920343 TGAAGCTTTTGATTTTAGAGTCAAGG-CTGAGACCATGACTCCAACCTGAGGGCACAAGAAGCTGGCCCATGATCCCCA----AAGTGTAAGGA i cebCap1.NW_016107730v1 I 5990 C 0 s aotNan1.NW_018502359v1 7022058 88 - 7032639 TGAAGCTCTTGATTTTAGAGTC-AAG-CTGAGACCATGACTCCAAATTGAAAATACATGAAGCTAGCACATGACCCACA----AACTGTAAAGA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867887 89 + 28711273 TGAAGGTCTTGATATTACAGTC-AAAGCCAAGACTGTAACTCCAAAGCAAGAATACAAGAAGCTGGCATGTGATCCCTT----AGGGATGAGGA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22132745 89 - 122082543 TAAAGATCTGGGCTCAGAAGAG-AAG-CTGAAGACTGGCTTCCATATCTG---TCTCTGAAGCCAGCACATGATCTACATTagagagagagaga i mm10.chr11 C 0 C 0 s canFam3.chr9 39590288 81 - 61074082 ---TGATCCTGACTTCAG-----AAA-CCAAGACGATAACTTAGTATCAAGGATTTATGAAACTGACACAAGATCCACA----TACTTGAAAGG i canFam3.chr9 C 0 T 3025 s dasNov3.JH570468 499119 76 - 852752 TGAATTTCTTGACGTCAATGTG-AAAGCTGAGGACATTC-------------AGTCATGGCAGTAACACACAATCCAGA----AGACATAAGAA i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=529162.000000 s hg38.chr17_JH159148v1_alt 35078 67 + 88070 AAAAAAGAATCAGGATGAAGTACTCTGCCCTCCCTCAAGCTGATTCACAAG-ATGTTAAACATGCAG-A s panTro5.chr17 16346180 67 + 83181570 AAAAAAGAATTAGGATGGAGTACTCTGCCCTCCCTCAAGCTGATTCACAAG-ATGTTAAACACGCAG-A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250798 67 + 83442489 AAAAAAGAATTAGGATGGAGTACTCTGCCCTCCCTCAAGCTGATTCACAAG-ATGTTAAACACGCAG-A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098057 66 + 4267968 AAAAGAGAATTAGGATGAAGTACTCTACTCTCGCTCAAGCTGATTCAGAAG-ATGTTAAACATGCA--A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082862 67 - 2193130 AAAAATGAATCAGGATGAAGTACTCTGTCCTCCCTCAAGCTGATTCATAAG-ATGTTAAACACACAG-A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115617 67 + 10377808 AAAAGAGAATCAGGACGAAGTATTCTGCCATCCCTGAAGCTGATTCACAAA-ATATTAAACATGCAG-A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006993 67 - 8458610 AAAAGAGAATCAGGATGAAGTACTCTGCCGTCCCTGAAGCGGATTCACAAG-ATATTAAACATGCAG-A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945965 67 + 75148670 AAAAGAGAATCAGGATGAAGTATTCTGCCGTCCCTGAAGCTGATTCACAAG-ATATTAAACATGCAG-A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191860 67 + 4244037 AAAAGAGAATCAGGATGAAGTATTCTGCCGTCCCTGAAGCTGATTCACAAG-ATATTAAACATGCAG-A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203905 67 + 4569836 AAAAAAGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCTGATTCACAAG-ATTTTAAACACGCAA-A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46147834 67 - 159171411 AAGAGAGAATCAGGCTGAAGTATTCTGCCCTCACTCAAGCTGATTCATAAG-ATGTTAAACATGCAG-A i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868083 67 + 3513951 GA-AGAGAATCAGGACGAAGTACTCTGCCCTCCCGCAAGCTGATTCACCAG-ATTTTAAACATGCAGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107730v1 1914061 67 + 1920343 GAAAGAGAATCAGGATGAAGTACTCTGCTCTCTCTCAAGCTGATTCACAAG-ATTTTAAACATGCAG-A i cebCap1.NW_016107730v1 C 0 N 0 s aotNan1.NW_018502359v1 7022146 67 - 7032639 CAGAGAGAATCAGGCTGAAGTATTCTGCCCTCACTCAAGCTGATTTATAAG-ATGTTAAACATGCAG-A i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22867976 67 + 28711273 AGAAGAGAATCAGGAAGAAGTACTCTGCACTTGCTCCACCTGATTCACAAA-GATGTAAAGATATAG-A i otoGar3.GL873537 C 0 I 1 s mm10.chr11 22132834 66 - 122082543 gagagagagagagagagagagGCCTTACATCCCATCAAAGTAATGAATACG-TTTCCAAA-GTGGTG-A i mm10.chr11 C 0 I 1 s canFam3.chr9 21491097 61 + 61074082 AGAATACAATCAAATTGAAGTAGATTGCATTTCCTCC-GTAGACTCATGAGCATTGTTGAGA------- i canFam3.chr9 I 9850 C 0 s dasNov3.JH570468 499195 67 - 852752 AGAAATGAATCTGGGTGCAACAGTCTACAATTTATCAAGCTGATTCACAAG-CTTTTAAACATGCAG-A i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=1637.000000 s hg38.chr17_JH159148v1_alt 35145 3 + 88070 -GAA s panTro5.chr17 16346247 3 + 83181570 -GAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250865 3 + 83442489 -GAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098123 3 + 4267968 -GAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082929 3 - 2193130 -GAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115684 3 + 10377808 -GAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007060 3 - 8458610 -GAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946032 3 + 75148670 -GAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191927 3 + 4244037 -GAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203972 3 + 4569836 -GAA i colAng1.NW_012122154v1 C 0 I 733 s calJac3.chr5 46147901 3 - 159171411 -GAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868150 3 + 3513951 -GAA i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7022213 3 - 7032639 -GAA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868044 2 + 28711273 -GA- i otoGar3.GL873537 I 1 C 0 s mm10.chr11 22132901 2 - 122082543 --AA i mm10.chr11 I 1 I 1 s canFam3.chr9 21491158 2 + 61074082 --AA i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 499262 3 - 852752 TGA- i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=116469.000000 s hg38.chr17_JH159148v1_alt 35148 38 + 88070 GTCATAA----AAATTAGGGTG--AGCA--------------------TGCTGGTTGTCAGCAA s panTro5.chr17 16346250 38 + 83181570 GTCATAA----AAATTAGGGTG--AGCA--------------------TGCTGGTTGTCAGCAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250868 38 + 83442489 GTCATAA----AAATTAGGGTG--AGCA--------------------TGCTGGTTGTCAGCAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098126 58 + 4267968 GTCACAA----AAATTAGGGTG--AGAAGGTTCACCCTAAGTTCATTTTGTTGGTTGTCATCAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082932 38 - 2193130 GTCATAA----AAACTAGGGTG--AGCA--------------------TGCTGGTTGTCAGCAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115687 40 + 10377808 TTCATAA----AAATGTGGGCGACAGCA--------------------TGGTGGCTGTCAGCAG i macNem1.NW_012014910v1 C 0 T 10023 s cerAty1.NW_012006043v1 2007063 40 - 8458610 TTCATTA----AAATGTGGGCGACAGCA--------------------TGGTGGCTGTCAGCAG i cerAty1.NW_012006043v1 C 0 T 16092 s chlSab2.chr16 64946035 40 + 75148670 CTCATAA----AAATGTGGGCGACAGCA--------------------TGGTGGCTGTCAGCAG i chlSab2.chr16 C 0 T 10439 s manLeu1.NW_012106252v1 2191930 40 + 4244037 TTCATAA----AAATGTGGGCGACAGCA--------------------TGGTGGCTGTCAGCAG i manLeu1.NW_012106252v1 C 0 T 16633 s calJac3.chr5 46147904 38 - 159171411 GTCATAA----AAATTAGGGTG--AGCA--------------------TGCTGGTTGTCAGCAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868153 32 + 3513951 AATAAAAGAAGAAATAGATGAG--AGCA--------------------TACTGT---------- i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7022216 38 - 7032639 GTCATAA----AAATTAGGGTG--AACG--------------------TGCTGGTTGTCAGCAA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868046 40 + 28711273 ATAATAG----AAATTATGGTTAAAGCA--------------------TACTGGCCTTCAGAAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22132904 36 - 122082543 CTCACAT----TAATATGTG----AGCT--------------------TATGTGCACATGGCAA i mm10.chr11 I 1 C 0 s canFam3.chr9 21491161 35 + 61074082 ---ATGA----CAGGGGCAGTGTAAGCA--------------------TGT--GTTCCCAGGAA i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 499265 39 - 852752 ---GTAA--CTCTATTTTGTTGAGAGCA--------------------TGCTGAGTGTCAGTAA i dasNov3.JH570468 C 0 C 0 e colAng1.NW_012122154v1 2203975 733 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=149221.000000 s hg38.chr17_JH159148v1_alt 35186 29 + 88070 AGTTT-GAAAGTAAATTTGTCCTCCAAGAG s panTro5.chr17 16346288 29 + 83181570 AGTTT-GAAAGCAAATTTGTCCTCCAAGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250906 29 + 83442489 AGTTT-GAAAGCAAATTTGTCCTCCAAGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098184 29 + 4267968 AGTTT-GAAAGTAAATTTGTCCTCCAAAAG i gorGor5.CYUI01015385v1 C 0 I 6 s nomLeu3.chrUn_GL397460_1 2082970 29 - 2193130 AGTTT-GAAAGAAAATTTGTCCTCCAAGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2105704 29 + 10377808 AGTTT-GAAAGTAAATTTGTCCTCTAAAAG i macNem1.NW_012014910v1 T 10023 C 0 s cerAty1.NW_012006043v1 1991011 29 - 8458610 AGTTT-GAAAGTAAATTTGTCCTCTAAAAG i cerAty1.NW_012006043v1 T 16092 I 6 s chlSab2.chr16 64935636 29 + 75148670 AGTTT-GAAAGTAAATTTGTCCTCCAAAAG i chlSab2.chr16 T 10439 C 0 s manLeu1.NW_012106252v1 2175337 29 + 4244037 AGTTT-GAAAGTAAATTTGTCCTCTAAAAG i manLeu1.NW_012106252v1 T 16633 I 6 s calJac3.chr5 46147942 29 - 159171411 AGTTT-GAAAGTTAATTTGTCCTCCAAGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868185 28 + 3513951 -GTTT-GAAAATAAAGTTGTCCCTTGAAAG i saiBol1.JH378271 C 0 I 305 s aotNan1.NW_018502359v1 7022254 29 - 7032639 AGTTT-GAAAGTAAATTTGTCCTCCAAGTG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868086 29 + 28711273 AGTTT-AGAAGAGATTTTGTCCCCCATAAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22132940 9 - 122082543 -------------GATTTGTGT-------- i mm10.chr11 C 0 C 0 s canFam3.chr9 21491196 27 + 61074082 AGCTGAGGGAGTAACT---TCTTGTAAGAC i canFam3.chr9 C 0 I 8 s dasNov3.JH570468 499304 26 - 852752 AGTCTAGAAAGAGATTTTGTCC---AAGG- i dasNov3.JH570468 C 0 C 0 e colAng1.NW_012122154v1 2203975 733 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=7864.000000 s hg38.chr17_JH159148v1_alt 35215 9 + 88070 GAGGACAGA- s panTro5.chr17 16346317 9 + 83181570 GAGGACAGA- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250935 9 + 83442489 GAGGACAGA- i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2082999 9 - 2193130 GAGGACAGA- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2105733 5 + 10377808 ----ATAAA- i macNem1.NW_012014910v1 C 0 I 3 s chlSab2.chr16 64935665 5 + 75148670 ----ATAAA- i chlSab2.chr16 C 0 I 4 s calJac3.chr5 46147971 9 - 159171411 GAGGACAGA- i calJac3.chr5 C 0 C 0 s aotNan1.NW_018502359v1 7022283 9 - 7032639 GAGGACAGA- i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868115 5 + 28711273 ----ATAAG- i otoGar3.GL873537 C 0 I 1 s mm10.chr11 22132949 6 - 122082543 ---GACAGA- i mm10.chr11 C 0 C 0 s canFam3.chr9 21491231 7 + 61074082 TGGGAAA--- i canFam3.chr9 I 8 I 1 s dasNov3.JH570468 499330 10 - 852752 AATGACGCGT i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2175366 6 + 4244037 I e saiBol1.JH378271 1868213 305 + 3513951 I e colAng1.NW_012122154v1 2203975 733 + 4569836 I e cerAty1.NW_012006043v1 1991040 6 - 8458610 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I e gorGor5.CYUI01015385v1 4098213 6 + 4267968 I a score=6770.000000 s hg38.chr17_JH159148v1_alt 35224 5 + 88070 AGGTT s panTro5.chr17 16346326 5 + 83181570 AGGTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250944 5 + 83442489 AGGTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098219 5 + 4267968 CAGTT i gorGor5.CYUI01015385v1 I 6 C 0 s nomLeu3.chrUn_GL397460_1 2083008 5 - 2193130 AGGTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2105741 3 + 10377808 --GTT i macNem1.NW_012014910v1 I 3 C 0 s cerAty1.NW_012006043v1 1991046 5 - 8458610 CTGTT i cerAty1.NW_012006043v1 I 6 C 0 s chlSab2.chr16 64935674 2 + 75148670 ---TT i chlSab2.chr16 I 4 C 0 s manLeu1.NW_012106252v1 2175372 5 + 4244037 CTGTT i manLeu1.NW_012106252v1 I 6 C 0 s calJac3.chr5 46147980 5 - 159171411 AGGTT i calJac3.chr5 C 0 C 0 s aotNan1.NW_018502359v1 7022292 5 - 7032639 AGGTT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868121 4 + 28711273 -CATT i otoGar3.GL873537 I 1 I 1 s mm10.chr11 22132955 4 - 122082543 -AGTA i mm10.chr11 C 0 I 1 s canFam3.chr9 21491239 4 + 61074082 TGGC- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 499340 5 - 852752 CAGTT i dasNov3.JH570468 C 0 C 0 e saiBol1.JH378271 1868213 305 + 3513951 I e colAng1.NW_012122154v1 2203975 733 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=12000.000000 s hg38.chr17_JH159148v1_alt 35229 1 + 88070 G s panTro5.chr17 16346331 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250949 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098224 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083013 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2105744 1 + 10377808 G i macNem1.NW_012014910v1 C 0 I 10019 s cerAty1.NW_012006043v1 1991051 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 I 16088 s chlSab2.chr16 64935676 1 + 75148670 G i chlSab2.chr16 C 0 I 10435 s manLeu1.NW_012106252v1 2175377 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 I 16629 s calJac3.chr5 46147985 1 - 159171411 G i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868518 1 + 3513951 G i saiBol1.JH378271 I 305 C 0 s aotNan1.NW_018502359v1 7022297 1 - 7032639 G i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868126 1 + 28711273 G i otoGar3.GL873537 I 1 I 1 s mm10.chr11 22132960 1 - 122082543 G i mm10.chr11 I 1 I 4 s canFam3.chr9 21491243 1 + 61074082 G i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499345 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e colAng1.NW_012122154v1 2203975 733 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=-8533.000000 s hg38.chr17_JH159148v1_alt 35230 1 + 88070 -C s panTro5.chr17 16346332 1 + 83181570 -C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250950 1 + 83442489 -C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098225 1 + 4267968 -C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083014 1 - 2193130 -C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115764 1 + 10377808 -G i macNem1.NW_012014910v1 I 10019 C 0 s cerAty1.NW_012006043v1 2007140 1 - 8458610 -G i cerAty1.NW_012006043v1 I 16088 C 0 s chlSab2.chr16 64946112 1 + 75148670 -G i chlSab2.chr16 I 10435 C 0 s manLeu1.NW_012106252v1 2192007 1 + 4244037 -G i manLeu1.NW_012106252v1 I 16629 C 0 s calJac3.chr5 46147986 1 - 159171411 -T i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868519 1 + 3513951 -T i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018502359v1 7022298 1 - 7032639 -C i aotNan1.NW_018502359v1 C 0 C 0 s canFam3.chr9 21491244 1 + 61074082 -T i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499346 1 - 852752 A- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22132961 4 - 122082543 I e otoGar3.GL873537 22868127 1 + 28711273 I e colAng1.NW_012122154v1 2203975 733 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=253819.000000 s hg38.chr17_JH159148v1_alt 35231 43 + 88070 CAGAAGGTTGCTGTGTGAGGATGGTGGTCCTCTGGAGAGTTGG s panTro5.chr17 16346333 43 + 83181570 CAGAAGGTTGCTGTGTGAGGATGATGGTCCTCTGGAGAGTTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250951 43 + 83442489 CAGAAGGTTGCTGTGTGAGGATGATGGTCCTCTGGAGAGTTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098226 43 + 4267968 CAGAGGGTTATTGTGTGAGGATGATGGTCCTCTGGAGAGTTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083015 43 - 2193130 CAGAAGGTTGTTGTGTGAGGATGATGGTCCTCTGGAGAGTTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115765 43 + 10377808 CAGAAAGTTGTTGTGAGAAGATAGTGGTTCTCTTGGGAGCTGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007141 43 - 8458610 CAGAAAGTTGTTGTGTGAGGACGGTGGTTCTCTTGGGAGTTGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946113 43 + 75148670 CAGAAAGTTGTTGTGAGAAGATAGTGGTTCTCTTGGGAATTGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192008 43 + 4244037 CAGAAAGTTGTTGTGAGAAGATGGTGGTTCTCTTGGGAGTTGA i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5 46147987 43 - 159171411 CAGAGCGCCGTCTTGTGAGGATGATGGTCCTTTTGGGAACTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868520 43 + 3513951 CAGAAGGTTGTTGTGTAAGGATGATGGTCCTTGGCAATGCTGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4672 43 - 4077172 CAGAAGGTTGTTGTGTTAGGATGATGGTCTTTGGCAATGCTGA i cebCap1.NW_016107543v1 N 0 C 0 s aotNan1.NW_018502359v1 7022299 43 - 7032639 CAGAACGTTGTCTTGTGAGGATGATGGTCCTTTTGGGAGTTGA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868128 43 + 28711273 TAAAAGATTGTTGTGTGATGATGATGGTCTTTTGGAGAGTGGA i otoGar3.GL873537 I 1 C 0 s mm10.chr11 22132965 43 - 122082543 TGTGGTATTGTTCAGTTGGAAAGTTGATCAGTAGCAGGGTTTG i mm10.chr11 I 4 I 14 s canFam3.chr9 21491245 42 + 61074082 -AGGATATATACTCCAGTGAGTGCTGAGTCTATGGCAAGTTGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499347 42 - 852752 TAGAGGGTTGGTCTGTGCACATGGTGGTT-TTTGATGAGGTGA i dasNov3.JH570468 C 0 C 0 e colAng1.NW_012122154v1 2203975 733 + 4569836 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=577152.000000 s hg38.chr17_JH159148v1_alt 35274 60 + 88070 TCAGCAGCAAGAAGGCTGACAGCAGCTGATCACAGAA------------------GTGGGCTGGAAGCAAGTGGTCCT s panTro5.chr17 16346376 60 + 83181570 TCAGCAGCAAGAAGGCTGACAGCAGCTGATCACAGAA------------------GTGGGCTGGAAGCAAGTGGTCCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16250994 60 + 83442489 TCAGCAGCAAGAAGGCTGACAGCAGCTGATCACAGAA------------------GTGGGCTGGAAGCAAGTGGTCCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098269 60 + 4267968 TCAGCAGCAAGAAGGCTGACAGCAGCTGATCACAGAA------------------GTGGGCTGGAAGCAAGTGGTCCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083058 60 - 2193130 TCAGCAGCAAGAAGGCTGACAGCAGCTGATCACAGAA------------------GTGGGCTGGAAGCAAGTGGTCCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115808 60 + 10377808 TCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACACAG------------------GTGGGCTGGAAGCAAGTGGTCCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007184 60 - 8458610 TCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACACAG------------------GTGGGCTGGAAGCAAGTGGTCCT i cerAty1.NW_012006043v1 C 0 T 10032 s chlSab2.chr16 64946156 60 + 75148670 TCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACACAG------------------GTGGGCTGGAAGCAAGTGGTCCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192051 60 + 4244037 TCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACACAG------------------GTGGGCTGGAAGCAAGTGGTCCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204708 60 + 4569836 TCAGCAGCAAACAGGCTGGCAGCAGCTGCTCACACAG------------------GTGGGCTGGAAGCAAGTGGTCCT i colAng1.NW_012122154v1 I 733 C 0 s calJac3.chr5 46148030 45 - 159171411 TCAGCAGCAAGAAGGCTGGCAGCAGCTGGTCACACAG------------------GTGGGCTG--------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868563 60 + 3513951 TCAGCAGCAGGAAGGCTGGCAGCAGCTGGACACACAG------------------GTGGGTTGGCAGCATGTGGTCCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4715 60 - 4077172 TCAGCACCAGGAAGGTTGGCAGCAGCTGGACACACAG------------------GTGGGCTGGCAGCAGGTGGTCCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022342 60 - 7032639 TCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACACAG------------------GTGGGTTGACAGCAGGTGGTCCT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868171 30 + 28711273 TCAGCAGCGGGAAGGCTGGCAGCAGCTAGG------------------------------------------------ i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133022 60 - 122082543 ACAGCAGCAGGGTGGGCTGCAGCAGCTGGTCACACAG------------------GCTGGCTTACAGCAGGTGCTCCT i mm10.chr11 I 14 C 0 s canFam3.chr9 21491287 63 + 61074082 TCAGCAGCAGCAAGGCTGGCAGCAGCTAGACACACAG---------------CATGTGGGCTTGCAGCAGGTGGTCCT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499389 78 - 852752 TCAGCAGCAGGAAGGCTGACAGCAATTGGACACACAGCAAGGGCTGCTGCAGCAGCTGGGGCGGCAGCAGGTGGTTCC i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=474650.000000 s hg38.chr17_JH159148v1_alt 35334 43 + 88070 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG s panTro5.chr17 16346436 43 + 83181570 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251054 43 + 83442489 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098329 43 + 4267968 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083118 43 - 2193130 GCAGCACGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115868 43 + 10377808 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997212 43 - 8458610 GCAGCAGGTGGACACACAGCAGGCTGGGCGGCAGCAG---GGCTGG i cerAty1.NW_012006043v1 T 10032 C 0 s chlSab2.chr16 64946216 43 + 75148670 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192111 43 + 4244037 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204768 43 + 4569836 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG---GGCTGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148075 43 - 159171411 GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAACAG---GGCTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868623 43 + 3513951 GCAGCAGGTGGTCTCACAGCAGGCTGGGTGGCAGCAG---GGCTGG i saiBol1.JH378271 C 0 T 5783 s cebCap1.NW_016107543v1 4775 43 - 4077172 GCAGCAGGTCGTCTCACAGCTGGCTGGGCGGCAGCAG---GGCTGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022402 43 - 7032639 GCAGCAGGTGGTCTCACAGCAGGCTGGACGGCAGCAG---GGCTGG i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22133082 31 - 122082543 ACAGCAGGTGGTTTCACA------------GCAGCTG---GGCTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21491350 46 + 61074082 GCAGCAGGTGGTGTGACAGCACGTTGGGCGGCAGCAGCAAGGCTGG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499467 43 - 852752 ACAGCAGGTGGTCTGACAGCAGGAGGGGCGGCAGCAG---GACTGG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22868201 0 + 28711273 C e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=128136.000000 s hg38.chr17_JH159148v1_alt 35377 10 + 88070 CAGCAGCTGG s panTro5.chr17 16346479 10 + 83181570 CAGCAGCTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251097 10 + 83442489 CAGCAGCTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098372 10 + 4267968 CAGCAGCTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083161 10 - 2193130 CAGCAGCTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115911 10 + 10377808 CAGCAGCTGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997255 10 - 8458610 CAGCAGCTGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946259 10 + 75148670 CAGCAGCTGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192154 10 + 4244037 CAGCAGCTGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204811 10 + 4569836 CAGCAGCTGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148118 10 - 159171411 CAGCAACTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1862883 10 + 3513951 CAGCAGCTGG i saiBol1.JH378271 T 5783 C 0 s cebCap1.NW_016107543v1 4818 10 - 4077172 CAGCAGCTGG i cebCap1.NW_016107543v1 C 0 I 88 s aotNan1.NW_018502359v1 7022445 10 - 7032639 CAGCAGCTGG i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22133113 10 - 122082543 CAGCAGCTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21491396 10 + 61074082 CAGCAGCTGG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499510 10 - 852752 CAGCAGTTGG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22868201 0 + 28711273 C e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=845585.000000 s hg38.chr17_JH159148v1_alt 35387 125 + 88070 AGCCACAGCTCTGATTTAGGCAACCAGGCAGGCAGACACTCGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGATGGGTGCACAGGAGCTGGGCTGG------------------------------------------CAGCAGCTGGACCCA---CAGAT----GA-T--TTGGCCA s panTro5.chr17 16346489 125 + 83181570 AGCCACAGCTCTGGTTGAGGCAACCAGGCAGGTAGACAGTCGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACGGGTGCACAGGAGCTGGGCTGG------------------------------------------CAGAAGCTGGACCCA---CAGCT----GG-T--TTGGCCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251107 126 + 83442489 AGCCACAGCTCTGGTTGAGGCAACCAGGCAGGTAGACAGTCATGGGGTGGTAGCAGGTTCTCCTGCAGTAGACGGGTGCACAGGAGCTGGGCTGG------------------------------------------CAGCAGCTGGACCCA---CAGCT----GGTT--TTGGCCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098382 125 + 4267968 AACCACAGCTCTGATTTAGGCAACCAGGCAGGCAGACACTCGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACGGGTGCACAGGAGCTGGGCTGG------------------------------------------CAGCAGCTGGACCCA---CAGCT----GG-T--TTGGCCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083171 125 - 2193130 AGCCACAGCTCTGGTTTAGGCAACCAGGCAGACAGACACATGTGGGGTGGTAGCAGGTTCTCCTGCAGTAGACGGGTGCACAGGAGCTGGGCTGG------------------------------------------CAGCAGCTGGACCCA---CAGCT----GG-T--TTGGCCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2115921 125 + 10377808 ATCCATAGCTCTGGTTTAGGCAACCAGGCAGGCAGACATATGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCACAGGAGCTGGTCTGG------------------------------------------TCACAGCTGGACCCA---CAGCT----GG-T--TTGGTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997265 113 - 8458610 ATCCACAGCTCTGGTTTAGGCAACCAGACAGGCAGATGCATGTAGGGTGGTAGCAGGTTCTCCTGCAGTAGACAGGTGCACAGGAGCTGGTTTGG------------------------------------------------------CCA---CAGCT----GG-T--TTGGCCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946269 108 + 75148670 ATCCATAGCTCTGATTTAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCACAGGAGCTGGTCTGG------------------------------------------CCACAGCTGGACC--------------------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192164 125 + 4244037 ATCCATAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACTTGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCACAGGAGCTGGTCTGG------------------------------------------CCACAGCTGGACCCA---CAGTT----GG-T--TTGGCCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204821 125 + 4569836 AGCCACAGCTCTGGTCTAGGCAACCAGGCAGGCAGACACATGTGGGATGGTAGCAGGTTCTCCTGCAGTAGACAGGTGCACAGGAGCTGGGCTGG------------------------------------------CCACAGCTGGACCCA---CAGTT----GG-C--TTGCCCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148128 125 - 159171411 ATCCACAGCTCTGGTTTAGGCAGCCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTCCTCGTGCAGTACACAGGTGCACAGGAGCTGGTCTGA------------------------------------------CCACAGCTGGACCCA---CAGCT----GG-T--CTGGCCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1862893 125 + 3513951 ATCCACAGCTCTGGTTCAGGCAACCGGGCAGGCGGACACATGTGGGGTGGTAGCAGGTTCTTGTGCAGTACACAGGGGCACAGGAGCTGTTCTGA------------------------------------------CCACAGCTGGACCCA---CAGCT----GG-T--TTGGCCA i saiBol1.JH378271 C 0 I 5648 s aotNan1.NW_018502359v1 7022455 125 - 7032639 ATCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGTACACAGGTGCACAGGAGCTGGTCTGG------------------------------------------CCACAGCTGGACCCA---CAGCT----GG-T--TTGGCCA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868201 155 + 28711273 --------------TTCAGACAGCCAGGCAGGCAGACGCAGGTGGGCTGGTAGCAGGTCCTGGTGCAGTAGACAGGTGCACAGCTGCTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGTGATGACAGAGGTGGGTTGCCAGCAGGTGGTCTTA---CAGCA----GG-TGGTTGGACA i otoGar3.GL873537 C 0 I 23 s mm10.chr11 22133123 137 - 122082543 --------------TT-------------------ACACAGGTTGGCTTACAGCAGGTGGTCCTACAACAGGTGGTTTCACAGCAGCTGGGCTGGCAGCATGGTGGGCTGTAGCAGCTGGTCACACAGACTGGTTTGCAACAAGTGGTTTCACAGCAGCT----GG-G--TTGGCAG i mm10.chr11 C 0 I 24 s canFam3.chr9 21491406 65 + 61074082 ------------------------------------------------------------ACCCGCAGCCACTGGACCCACAGCAGCTGGGCTGG------------------------------------------CAGCAGCTGGACACA---CAGCATGTGGG-C--TTG---- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499520 155 - 852752 ATCCAAAGCTCTGGGGTTGGCAGCCAGGCAGGCAGCAGCATGTTGGGTGGTAGCAGGTTCTCCTGCAGTACACGGGGCCACTGCAAGCTGGCTGGCAGCAGGTTGTGTAGCAGCAATTGGGGCGG------------CAGCAGCTGGAGCCA---CCACA----GG-T--TTGGCCA i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 4828 88 - 4077172 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=296690.000000 s hg38.chr17_JH159148v1_alt 35512 47 + 88070 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGTTAGCAGGGTGTGCTGCA s panTro5.chr17 16346614 47 + 83181570 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGAGGGC-------------------TGGCAGCAGGGTGTGCTGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251233 48 + 83442489 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGAGGGCNNNNNNNNNNNNNNNNNNNNG------------------ i panPan2.chr17 C 0 I 5951 s gorGor5.CYUI01015385v1 4098507 47 + 4267968 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083296 47 - 2193130 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2116046 47 + 10377808 CAGTAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997378 47 - 8458610 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946377 34 + 75148670 ----------------------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192289 146 + 4244037 CAGCAGCTGGACCCACAGCAGGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAGCAAATTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204946 47 + 4569836 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------CAAAGCAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148253 47 - 159171411 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------TACAACAGGTGGGC-------------------TGGCAGCAGGGTGTGCTGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868666 44 + 3513951 CAGCAGCTGGACA---------------------------------------------------------------------------------------------------CACAGCAGGAGGGC-------------------TGGCAGCAGGGTGTGCT--- i saiBol1.JH378271 I 5648 C 0 s aotNan1.NW_018502359v1 7022580 47 - 7032639 CAGCAGCTGGACC---------------------------------------------------------------------------------------------------TACAGCAGGTGGGC-------------------TGGCAGCAGGGTTTGCTGCA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868379 29 + 28711273 ---------------------------------------------------------------------------------------------------------------------CAGTGGGGC-------------------TGGCAACAGGGTGTGCTGCA i otoGar3.GL873537 I 23 C 0 s mm10.chr11 22133284 32 - 122082543 CAGCAGGTGGTCC---------------------------------------------------------------------------------------------------TACAGCAGGTGGTT-------------------TCACA--------------- i mm10.chr11 I 24 C 0 s canFam3.chr9 21491471 47 + 61074082 CAGCACGTGGTCC---------------------------------------------------------------------------------------------------TGCAGCAGGTGGTG-------------------TGACAGCACGTTGGGCGGCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499675 47 - 852752 CAGGAGCTGGACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGC-------------------TGGCAGCAGGGAGTGGTGCA i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 4828 88 - 4077172 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=10035.000000 s hg38.chr17_JH159148v1_alt 35559 1 + 88070 G s panTro5.chr17 16346661 1 + 83181570 G i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098554 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083343 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2116093 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997425 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946411 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192435 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204993 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148300 1 - 159171411 G i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107543v1 4916 1 - 4077172 G i cebCap1.NW_016107543v1 I 88 C 0 s aotNan1.NW_018502359v1 7022627 1 - 7032639 G i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868408 1 + 28711273 G i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133316 1 - 122082543 G i mm10.chr11 C 0 C 0 s canFam3.chr9 21491518 1 + 61074082 G i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499722 1 - 852752 A i dasNov3.JH570468 C 0 C 0 e saiBol1.JH378271 1868710 0 + 3513951 C e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I e panPan2.chr17 16251281 5951 + 83442489 I a score=477505.000000 s hg38.chr17_JH159148v1_alt 35560 51 + 88070 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAGGTGGTC s panTro5.chr17 16346662 51 + 83181570 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAGGTGGTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257232 51 + 83442489 CAGGAAGGCTGGCAACAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAGGTGGTC i panPan2.chr17 I 5951 C 0 s gorGor5.CYUI01015385v1 4098555 51 + 4267968 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------CTGGGCTGGCAGCAGGTGGTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083344 51 - 2193130 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTCGGCTGGCAGCAGGTGGTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2116094 45 + 10377808 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAG------ i macNem1.NW_012014910v1 C 0 T 9959 s cerAty1.NW_012006043v1 1997426 51 - 8458610 CAGGAAGGCTGGCAGCAGCTGGTCACACAA------------------------------------------------ATGGGCTGGCAGCAGGTGGTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946412 45 + 75148670 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAG------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192436 45 + 4244037 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAG------ i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204994 45 + 4569836 CAGGAAGTCCGGCAGCAGCTGGTCACACAG------------------------------------------------ATGGGCTGGCAGCAG------ i colAng1.NW_012122154v1 C 0 I 3 s calJac3.chr5 46148301 51 - 159171411 CAGGAAGGCTGGCAGCAGGTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAGCTGGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868710 40 + 3513951 -----------GCTGCAGCTGGTCACACAG------------------------------------------------GTGGGCTTCCAGCAGGTAGTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4917 51 - 4077172 CAGCAAGGCTGGCAGCAGCTGGACACACAG------------------------------------------------GTGGGCTGGCAGCAGGTGGTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022628 51 - 7032639 CAGGAAGGCTGGCAGCAGCTGGTCACACAG------------------------------------------------GTGGGCTGGCAGCAGCTGGTC i aotNan1.NW_018502359v1 C 0 I 37 s otoGar3.GL873537 22868409 36 + 28711273 ---------------TAGGTGGTCTCACAT------------------------------------------------GTTGGCCACCAGCAGGTGGTC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133317 51 - 122082543 CAGCTGGGTTGGCAGCAGCTGATCACACAG------------------------------------------------GTTGGTTTACAGCAGGTGGTC i mm10.chr11 C 0 C 0 s canFam3.chr9 21491519 99 + 61074082 CAGCAAGGCTGGCAGCAGCTGGACCCGCAGCCACTGGACCCACAGCAGCTGGGCTGGCAGCAGCTGGACACACAGCATGTGGGCTTGCAGCATGTGGTC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499723 51 - 852752 CAGGAAGGGCGGCAGCAGCTGGTCACACAG------------------------------------------------GTTGGCTGGCAGCAGGTGGTC i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=57268.000000 s hg38.chr17_JH159148v1_alt 35611 9 + 88070 CTGCAGCAG s panTro5.chr17 16346713 9 + 83181570 CTGCAGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257283 9 + 83442489 CTGCAGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098606 9 + 4267968 CTGCAGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083395 9 - 2193130 CTACAGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997477 9 - 8458610 CTACAGCAG i cerAty1.NW_012006043v1 C 0 C 0 s calJac3.chr5 46148352 9 - 159171411 ACACAGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868750 9 + 3513951 CTGCAGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4968 9 - 4077172 CTGCAGCAG i cebCap1.NW_016107543v1 C 0 C 0 s otoGar3.GL873537 22868445 9 + 28711273 CTGCGGCAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133368 9 - 122082543 CTACAGCAG i mm10.chr11 C 0 C 0 s canFam3.chr9 21491618 9 + 61074082 CTGCAGCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499774 9 - 852752 CTACAGCAG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022679 37 - 7032639 I e manLeu1.NW_012106252v1 2192481 0 + 4244037 C e colAng1.NW_012122154v1 2205039 3 + 4569836 I e chlSab2.chr16 64946457 0 + 75148670 C e macNem1.NW_012014910v1 2116139 9959 + 10377808 T e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=120824.000000 s hg38.chr17_JH159148v1_alt 35620 17 + 88070 GTGTTTTGACAGCAAGT s panTro5.chr17 16346722 17 + 83181570 GTGTTTTGACAGCAAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257292 17 + 83442489 GTGTTTTGACAGCAAGT i panPan2.chr17 C 0 T 6028 s gorGor5.CYUI01015385v1 4098615 17 + 4267968 GTGTTTTGACAGCAAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083404 17 - 2193130 GTGTTTTGACAGCAAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2106180 17 + 10377808 GTGTTTTGACAGCAAGT i macNem1.NW_012014910v1 T 9959 C 0 s cerAty1.NW_012006043v1 1997486 17 - 8458610 GTGTTTTGACAGCAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946457 17 + 75148670 GTATTTTGACAGCAAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192481 17 + 4244037 GTGTTTTGATAGCAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205042 14 + 4569836 ---TTTTGACAGCAAGT i colAng1.NW_012122154v1 I 3 C 0 s calJac3.chr5 46148361 1 - 159171411 G---------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868759 17 + 3513951 GTGTTTTGACAGCAAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4977 17 - 4077172 GTGTTTTGACAGCAAGT i cebCap1.NW_016107543v1 C 0 C 0 s otoGar3.GL873537 22868454 17 + 28711273 GTGGTTGGACAGCAAGT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133377 11 - 122082543 GAGGTTTCACA------ i mm10.chr11 C 0 C 0 s canFam3.chr9 21491627 17 + 61074082 GTGGTGTGACAGCACGT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 499783 17 - 852752 GTGGTCTGACAGCAGAG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022679 37 - 7032639 I e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=103154.000000 s hg38.chr17_JH159148v1_alt 35637 11 + 88070 TGGGTGGCAGC s panTro5.chr17 16346739 11 + 83181570 TGGGCGGCAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251281 11 + 83442489 TTGGTGGCAGC i panPan2.chr17 T 6028 C 0 s gorGor5.CYUI01015385v1 4098632 11 + 4267968 TGGGTGGCAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083421 11 - 2193130 TGGGCGGCAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2106197 11 + 10377808 TGGGCGGCAGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997503 11 - 8458610 TGGGTGGCAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946474 11 + 75148670 TGGGCGACAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192498 11 + 4244037 TGGGCGGCAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205056 11 + 4569836 TGGGCGGCAGC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1868776 11 + 3513951 TGGGCGGCAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4994 11 - 4077172 TGGGCGGCAGC i cebCap1.NW_016107543v1 C 0 C 0 s otoGar3.GL873537 22868471 11 + 28711273 TGGGCGGCAGC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133388 5 - 122082543 ------GCAGC i mm10.chr11 C 0 C 0 s canFam3.chr9 21491644 11 + 61074082 TGGGAGGCAGC i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 499800 11 - 852752 TGGGCAGCAGC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7022679 37 - 7032639 I e calJac3.chr5 46148362 0 - 159171411 C e macFas5.chr16 28049576 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=335545.000000 s hg38.chr17_JH159148v1_alt 35648 25 + 88070 AAGGCTGGCAGCAGCTGGACACAC------------A s panTro5.chr17 16346750 25 + 83181570 AAGGCTGGCAGCAGCTGGACACAC------------A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251292 24 + 83442489 -AGGCTGGCAGCAGCTGGACACAC------------A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098643 25 + 4267968 AAGGCTGGCAGCAGCTGGACACAC------------A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083432 25 - 2193130 AAGGTTGGCAGCAGCTGGACACAC------------A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049576 25 - 80997621 AGGGCTGGCAGCAGCTGGACACAC------------A i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106208 25 + 10377808 AAGGCTGGCAACAGCTGGACACAC------------A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997514 25 - 8458610 AAGGCTGGCAGCAGCTGGACACAC------------A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946485 25 + 75148670 AAGGCTGGCAGCAGCTGGACACAC------------A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192509 25 + 4244037 AAGGCTGGCAGCAGCTGGACACAC------------A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205067 25 + 4569836 AAGGCTGGCAGCAGCTGGACACAC------------A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148362 25 - 159171411 AGGGCTGGCAGCAGCTGGACACAC------------A i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868787 25 + 3513951 AAGGCTGGCAGCAGCTGGACACAC------------A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5005 25 - 4077172 AAGGCTGGCAGCAGCTGGACACAC------------A i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022716 25 - 7032639 AAGGCTGGCAGCAGCTGGTCACAC------------A i aotNan1.NW_018502359v1 I 37 C 0 s otoGar3.GL873537 22868482 25 + 28711273 AGGGCTGGAGGCAGCTGTACTCAT------------A i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133393 37 - 122082543 TGGGCTGGCAGCAGCTGGTTATACATGTTGGCTTATA i mm10.chr11 C 0 C 0 s canFam3.chr9 21491658 25 + 61074082 AAGGCTCACAGCAGCTGGATCCAC------------A i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 499811 25 - 852752 AAGGTTGGCAGCAGCTGGACCCAC------------A i dasNov3.JH570468 C 0 I 22848 e rheMac8.chr16 30135516 2040 - 77216781 I a score=40043.000000 s hg38.chr17_JH159148v1_alt 35673 5 + 88070 G------------------------CAGG s panTro5.chr17 16346775 5 + 83181570 G------------------------CAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251316 5 + 83442489 G------------------------CAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098668 5 + 4267968 G------------------------CAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083457 5 - 2193130 G------------------------CAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049601 5 - 80997621 G------------------------CAGG i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2106233 5 + 10377808 G------------------------CAGG i macNem1.NW_012014910v1 C 0 I 1 s cerAty1.NW_012006043v1 1997539 5 - 8458610 G------------------------CAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946510 5 + 75148670 G------------------------CAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192534 5 + 4244037 G------------------------CTGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205092 5 + 4569836 G------------------------CAGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148387 5 - 159171411 G------------------------CAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868812 5 + 3513951 G------------------------CAGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5030 5 - 4077172 G------------------------CAGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022741 29 - 7032639 GGTGGGCTGGCAGCAGCTGGTCACACAGG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868507 5 + 28711273 G------------------------CAGC i otoGar3.GL873537 C 0 I 1 s mm10.chr11 22133430 5 - 122082543 G------------------------CAAG i mm10.chr11 C 0 I 1 s canFam3.chr9 21491683 3 + 61074082 G------------------------CA-- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 522684 5 - 852752 G------------------------CAAG i dasNov3.JH570468 I 22848 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=-1450.000000 s hg38.chr17_JH159148v1_alt 35678 1 + 88070 -A s panTro5.chr17 16346780 1 + 83181570 -A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251321 1 + 83442489 -A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098673 1 + 4267968 -A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083462 1 - 2193130 -A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997544 1 - 8458610 -A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946515 1 + 75148670 -A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192539 1 + 4244037 -A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205097 1 + 4569836 -A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148392 1 - 159171411 -A i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868817 1 + 3513951 -A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5035 1 - 4077172 -A i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022770 1 - 7032639 -T i aotNan1.NW_018502359v1 C 0 C 0 s dasNov3.JH570468 522689 1 - 852752 C- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22133435 1 - 122082543 I e canFam3.chr9 21491686 0 + 61074082 C e otoGar3.GL873537 22868512 1 + 28711273 I e macNem1.NW_012014910v1 2106238 1 + 10377808 I e macFas5.chr16 28049606 1 - 80997621 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=27770.000000 s hg38.chr17_JH159148v1_alt 35679 3 + 88070 -GGG s panTro5.chr17 16346781 3 + 83181570 -GGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251322 3 + 83442489 -GGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098674 3 + 4267968 -GGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083463 3 - 2193130 -GGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049607 3 - 80997621 -GGG i macFas5.chr16 I 1 C 0 s macNem1.NW_012014910v1 2106239 3 + 10377808 -GGG i macNem1.NW_012014910v1 I 1 C 0 s cerAty1.NW_012006043v1 1997545 3 - 8458610 -GGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946516 3 + 75148670 -GGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192540 3 + 4244037 -GGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205098 3 + 4569836 -GGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148393 3 - 159171411 -GGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868818 3 + 3513951 -GGG i saiBol1.JH378271 C 0 I 12582 s cebCap1.NW_016107543v1 5036 3 - 4077172 -GGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022771 3 - 7032639 -GGG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868513 3 + 28711273 -GGG i otoGar3.GL873537 I 1 C 0 s mm10.chr11 22133436 2 - 122082543 --GG i mm10.chr11 I 1 I 1 s dasNov3.JH570468 522690 3 - 852752 TGG- i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 21491686 0 + 61074082 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=255703.000000 s hg38.chr17_JH159148v1_alt 35682 25 + 88070 CTGGCAGCAGGATGTGCT-------------------------------------------------------------------------GCTGCAG s panTro5.chr17 16346784 25 + 83181570 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251325 25 + 83442489 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCGGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098677 25 + 4267968 CTGGCAGCAAGGTGTGCT-------------------------------------------------------------------------GCAGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083466 25 - 2193130 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCAGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049610 25 - 80997621 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106242 25 + 10377808 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997548 25 - 8458610 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946519 25 + 75148670 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192543 25 + 4244037 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205101 25 + 4569836 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148396 25 - 159171411 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCAGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1881403 25 + 3513951 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i saiBol1.JH378271 I 12582 C 0 s cebCap1.NW_016107543v1 5039 25 - 4077172 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCTGCAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022774 98 - 7032639 CTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAAAGGTGTGCTGCAGCAGGAAGGCTGGCAGCAG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868516 25 + 28711273 CTGGCAGCAGGGTGTGCT-------------------------------------------------------------------------GCAACAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133439 25 - 122082543 TTCACAGTTGCTGGAATG-------------------------------------------------------------------------GCAGCAG i mm10.chr11 I 1 C 0 s dasNov3.JH570468 522693 25 - 852752 CTGGCAGCAGGTTGTGTA-------------------------------------------------------------------------GCAGCAA i dasNov3.JH570468 C 0 I 106 e canFam3.chr9 21491686 0 + 61074082 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=100.000000 s hg38.chr17_JH159148v1_alt 35707 1 + 88070 G s panTro5.chr17 16346809 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251350 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098702 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083491 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049635 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106267 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997573 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946544 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192568 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205126 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148421 1 - 159171411 C i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1881428 1 + 3513951 C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5064 1 - 4077172 C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022872 1 - 7032639 C i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868541 1 + 28711273 G i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133464 1 - 122082543 C i mm10.chr11 C 0 C 0 e canFam3.chr9 21491686 0 + 61074082 C e dasNov3.JH570468 522718 106 - 852752 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=322212.000000 s hg38.chr17_JH159148v1_alt 35708 29 + 88070 TGGTCACAGTGGTGGGCTTCCAGCAGGTT s panTro5.chr17 16346810 29 + 83181570 TGGTCACAGTGGTGGGCTGCCAGCAGGTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251351 29 + 83442489 TGGTCACAGTGGTGGGCTGCCAGCAGGTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098703 29 + 4267968 TGGTCACAGTGGTGGGCTGCCAGCAGGTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083492 20 - 2193130 TGGTCACTGTGGTGGGCTGC--------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049636 29 - 80997621 TGGTCACACAGGTGGGCTTCCAGCAGGTG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106268 29 + 10377808 TGGTCACACAGGTGGGCTTCCAGCAGGTG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997574 29 - 8458610 TGGTCACAGTGGTGGGCTTCCAGCAGGTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946545 29 + 75148670 TGGTCACACAGGTGGGCTTCCAGCAGGTG i chlSab2.chr16 C 0 T 10378 s manLeu1.NW_012106252v1 2192569 29 + 4244037 TGGTCACACAGGTGGGCTTCCAGCAGGTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205127 29 + 4569836 TGGTCACACAGGTGGGCTTCCAGCAGGTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148422 29 - 159171411 TGGTCACACAGGTGGGCTTCCAGCAGGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1881429 29 + 3513951 TGGTCACACAGGTGGGCTTCCAGCAGGTG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5065 29 - 4077172 TGGTCACACAGGTGGGCTTCCAGCAAGTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022873 29 - 7032639 TGGTCACACAGGTGGGCTTCCAGCAGGTG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868542 29 + 28711273 TGGCCTCACAGGTGGGCTGCCAGTAGATG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133465 29 - 122082543 TGGTTACACATGGTGGCTTATAGCAGGTG i mm10.chr11 C 0 C 0 s canFam3.chr9 21491686 19 + 61074082 ----------GCTGGGCTCGCAGAAGGTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 522824 29 - 852752 TGGTCACACAGGTTGGCTGGCAGCAGGTG i dasNov3.JH570468 I 106 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=613966.000000 s hg38.chr17_JH159148v1_alt 35737 49 + 88070 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCATGTAGGCTGACAGCAAGGGGAAC s panTro5.chr17 16346839 49 + 83181570 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGACAGCAAGGGGAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251380 49 + 83442489 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGACAGCAAGGGGAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098732 49 + 4267968 GTCCTGCAGCAGGTTGTC---------------------------------------------------------CTGCAGCAGGTAGGCTGATAGCAAGGGGAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083512 43 - 2193130 ------CAGCAGGTGGTC---------------------------------------------------------CTGCAGCATGTAGGCTTACAGCAAGGGGAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049665 49 - 80997621 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGACAGCAAGGGGAGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106297 49 + 10377808 GTTCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGGCAGCAAGGGGAGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997603 49 - 8458610 GTCCTGTGACAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGACAGCAAGAGGAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936196 49 + 75148670 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGGCAGCAAGGGGAGC i chlSab2.chr16 T 10378 C 0 s manLeu1.NW_012106252v1 2192598 49 + 4244037 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGACAGCAAGGGGAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205156 49 + 4569836 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGGCAGCAAGGGGAGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148451 49 - 159171411 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CGGCAGCACGTAGGCTGGCAGCAAGGGGAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1881458 49 + 3513951 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGGCAGCAAGGGGAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5094 49 - 4077172 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTGCAGCACGTAGGCTGGCAGCAAGGGGAGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022902 49 - 7032639 GTCCTGCAGCAGGTGGTC---------------------------------------------------------CTACAGCACGTAGGCTGGCAGCAAGGGGAGC i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868571 94 + 28711273 GTCCTGCAGCAGGTGGTTAGACAGCAAGCTGGGTGGCA------------GCAGCTGGGCTGGCAGCAGGGCGTGCTGCAGCAGGTGGACTGGCAGCAAGGGGAGC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133494 49 - 122082543 GTCCTACAGCAGGTGGTT---------------------------------------------------------TCACAGCAGCTGGGCTGACAACAGGGTGGGC i mm10.chr11 C 0 I 12644 s canFam3.chr9 21491705 49 + 61074082 GTCCTGCAGCACGTGGTC---------------------------------------------------------CTGCAGCACGTGGGCTGGCAGCATGGGGAGC i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 522853 106 - 852752 GTCCTACAGCAGGTGGTCTGACAGCAGAGTGGGTGGCAGCAAGGCTGGCCGCAGCTGGACCCACAAGAACTGGACCCACAGCAGGTGGGCTGGCAGCAGGGAGAGC i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=246780.000000 s hg38.chr17_JH159148v1_alt 35786 23 + 88070 AGCAGT-GGGTCATGGTGTCAGGG s panTro5.chr17 16346888 23 + 83181570 AGCAGT-GGGTCATGGTGTCAGGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251429 23 + 83442489 AACAGT-GGGTCATGGTGTCAGGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098781 23 + 4267968 AACAGT-GGGTCATGGTGTCAGGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083555 23 - 2193130 AGCAGT-GGGTCATTGTGTCACGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049714 23 - 80997621 AACAGT-TGGTCATGGTGTCAGGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106346 23 + 10377808 AACAGT-TGGTCATGGTGTCAGGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997652 23 - 8458610 AGCAGT-GGGTCATGGTGTCAGGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936245 23 + 75148670 AACAGT-TGGTCATGGTGTCAGGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192647 23 + 4244037 AACAGT-TGGTCATGGTGTCAGGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205205 23 + 4569836 AACAGT-TGGTCATGGTGTCAGGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148500 24 - 159171411 AGCAGTGGGGTCATGATGTCAGAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1881507 23 + 3513951 AGCAGT-AAGTCATAGTGTCAGGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5143 23 - 4077172 AGCAGT-GGGTCATGGTGTCAGGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022951 23 - 7032639 AGCAGT-CAGTCATGGTGTCAGAG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22868665 23 + 28711273 AGCAGT-GGGTCATGGCGTCCTGT i otoGar3.GL873537 C 0 T 7897 s mm10.chr11 22146187 23 - 122082543 AGGTGT-GGGTCATGGTGTCAGGA i mm10.chr11 I 12644 C 0 s canFam3.chr9 21491757 23 + 61074082 ACGATT-CACTCATGGTGTCGCCG i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 522959 22 - 852752 AGCAGG-AAGTCATGGTGTCAGG- i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=753658.000000 s hg38.chr17_JH159148v1_alt 35809 64 + 88070 GTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGA s panTro5.chr17 16346911 64 + 83181570 GTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACTCCTTGCAATCTGGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251452 64 + 83442489 GTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACTCCTTGCAATCTGGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098804 64 + 4267968 GTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083578 64 - 2193130 GTGAAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049737 64 - 80997621 GTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106369 64 + 10377808 GTGGAAG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997675 64 - 8458610 GTGGAAG-GTGAGTTTCTGTTCAGAGGTGAGTTTCCAAGAAT----TTGATGACCCCTTGCAGTCTGGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936268 64 + 75148670 GTGGAGG-GTGGGTTTCTGATCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATTGGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192670 64 + 4244037 ATGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205228 64 + 4569836 GTGAAGG-GTGGGCTTCTGTTCAGAGGTGAATTTCCCAGAAT----CTGATGACCCCTTGCAATCTAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148524 64 - 159171411 GTGGAGG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCTTCCAATCTGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1881530 64 + 3513951 GTGGAGG-GTGAGTTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCCTCCAATCTGGG i saiBol1.JH378271 C 0 T 18209 s cebCap1.NW_016107543v1 5166 64 - 4077172 GTGGAGG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCTTCCAATCTGGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7022974 64 - 7032639 GTGGAGG-GTGGGCTACTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCCTCCAATCTGGG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22860791 64 + 28711273 GTGGAGG-GTGGGTTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGCTGATGCCTTCCAATGTGGA i otoGar3.GL873537 T 7897 C 0 s mm10.chr11 22146210 64 - 122082543 GAGGAGG-GTGATAGTCTATTCCCAGGTGAGTTTTACACAAT----GTAGCAAGTTCTTCCAGTCAGGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21491780 69 + 61074082 GGGGAGGCGTGGGCTTCTGTTCTGAGGTGACGTTCTCAGATTCTGACTGATGCCTCCTTCCATTCTGGG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 522981 59 - 852752 ATGGAGG---GGGCTCGTGTTCAGAGGTG---TTTGCAGAAT----CTGATGGCTCCTTTAATTCTGTG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=923033.000000 s hg38.chr17_JH159148v1_alt 35873 80 + 88070 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAAACAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT s panTro5.chr17 16346975 80 + 83181570 CCTTTTATGCACCTGGC--------CTCCAAAGTTTCCTCCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251516 80 + 83442489 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCTCCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098868 80 + 4267968 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCGCCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083642 80 - 2193130 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACG-TTGTTTCCCACAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049801 80 - 80997621 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCTATAGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106433 80 + 10377808 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCTATAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997739 81 - 8458610 CCTTTTGTAAACCTGGC--------CTCCAAAGTGTCCACCAATCTGCAGGGTTTTTCTTTGTTGCTGTTTACACTTGTTTTCTATAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936332 80 + 75148670 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCTATAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192734 80 + 4244037 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACA-TTGTTTTCCACAGT i manLeu1.NW_012106252v1 C 0 T 10406 s colAng1.NW_012122154v1 2205292 81 + 4569836 CCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCTGCAGGATTTTTCTTTGTTGCTGTTTACAATTGTTTTCCATAGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148588 80 - 159171411 CCTTTTATACATGTGGC--------CTTCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1863385 80 + 3513951 CCTTTTATACATCGGGC--------CTCCAACGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT i saiBol1.JH378271 T 18209 C 0 s cebCap1.NW_016107543v1 5230 80 - 4077172 CCTTTTATACACGTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTTCCACAGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023038 80 - 7032639 CCTTTTATACATGTGGC--------CTCCAATGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACA-TTGTTTCTCACAGT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22860855 80 + 28711273 CCTTTTATACACTGGGC--------CTCCAAAGTTTGGACCAATGGGCAGAAGTTTTCCTTGTTGTTGTTGACA-CTGTTTTCCATAAT i otoGar3.GL873537 C 0 I 2 s mm10.chr11 22146274 75 - 122082543 CCTTTTATACAACAGGC--------CTCCAAGGTTTGGACCAATCAGAAGGAGGTTTCTTTCTTGTT-----TA-TTATTTTCCATATT i mm10.chr11 C 0 C 0 s canFam3.chr9 21491849 81 + 61074082 GCTTTTATACACTGGACCCCCTCAACCCCAACGTATGGACCAATGGGCAGGACTTCCCT-------TGTTTATA-CCGTTTTCCATAGT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 523040 75 - 852752 TCTTTTATACTCTGGGC--------C-CCAATATTT-AACTAATCAGCTGATCTTTCCCCTATTATTG---ACA-TTGTTTACCATGGA i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=397748.000000 s hg38.chr17_JH159148v1_alt 35953 52 + 88070 CATTGTGGT---ATTGTCAAAGGGGACGTTGTTTCCTAAA-GGTTATGAATCTTTT s panTro5.chr17 16347055 52 + 83181570 CATTGTGGT---ATTGTCAAAGGGGACGTTGTTTCCTAAA-GGTTATGAATCTTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251596 52 + 83442489 CATTGTGGT---ATTGTCAAAGGGGACGTTGTTTCCTAAA-GGTTATGAATCTTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4098948 52 + 4267968 CACTGTGGT---ATTGTCAAAGGGGACGTTGTTTCCTAAA-GGTTATGAATCTTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083722 52 - 2193130 CATTTTGGT---ATTGTCAAAGGGGAAGTTGTTTCCTAAA-GATTATGAATCTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049881 52 - 80997621 CAGTCTGGG---ACTGTCAAAGGGGAAGTTGTTTCCTAAA-GATTATGAATCTTTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106513 52 + 10377808 CAGTCTGGG---ACTGTCAAAGGGGAAGTTGTTTCCTAAA-GATTATGAATCTTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997820 52 - 8458610 CAGTTTGGC---ATTGTCAAAGAGGAAGTCATTTCCCAAA-TGTTATGAATCTTTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936412 52 + 75148670 CAGTTTGGG---ACTGTCAAAGGGGAAGTTGTTTCCTAAA-GATTATGAATCTTTT i chlSab2.chr16 C 0 I 20009 s colAng1.NW_012122154v1 2205373 52 + 4569836 CAGTTTGGC---ATTGTCAAAGAGGAAGTCATTTCCTAAA-TGTTATGAATCTTTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148668 52 - 159171411 CCGATTGGG---ATTGTCAAAGGGGAAGTTGTTTTTGAAA-TCTTATGAATCTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1863465 52 + 3513951 CCGTTTGGG---ATTGTCAAAGGGGAAGTTGTTTCTGAAA-TCTTATGAATCTTTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5310 52 - 4077172 CCGTTTGGG---ATTGTCAAAGGGGAAGTTGTTTTTAAAA-TCTTATGAATCTTTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023118 52 - 7032639 CTATTTGGG---ATTGTCAAAGGGGAAGTTGTTTTTGAAA-TCTTATGAATCTTTT i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22860937 51 + 28711273 CTAGCTGA----ATTATGAAGGAGGAAGTTGTTTCCTAAG-GGTTAAAACTCTTCC i otoGar3.GL873537 I 2 C 0 s mm10.chr11 22146349 51 - 122082543 TAATTTGTG---TTCATCAAGGAAGAATTCCTTACCCAA--TGCTCTGAATCATTT i mm10.chr11 C 0 C 0 s canFam3.chr9 21491930 49 + 61074082 CACTGGCGG---CTGGTAGAAGAGGAAG---TTCCCTAAG-TGTTAGGAATCCCTA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 523115 54 - 852752 --TAGTGGGCAAACTATCAAGAAGGATGTTTTCCCCCAAAGTGTTATGACTCTTCT i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2192814 10406 + 4244037 T e rheMac8.chr16 30135516 2040 - 77216781 I a score=63120.000000 s hg38.chr17_JH159148v1_alt 36005 6 + 88070 GAAAGT s panTro5.chr17 16347107 6 + 83181570 GAAAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251648 6 + 83442489 GAAAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099000 6 + 4267968 GAAAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083774 6 - 2193130 GAAAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049933 6 - 80997621 GAAAGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106565 6 + 10377808 GAAAGT i macNem1.NW_012014910v1 C 0 I 17 s cerAty1.NW_012006043v1 1997872 6 - 8458610 GAAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64956473 6 + 75148670 GAAAGT i chlSab2.chr16 I 20009 C 0 s colAng1.NW_012122154v1 2205425 6 + 4569836 GAAAGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148720 6 - 159171411 GAAAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1863517 6 + 3513951 GAAGGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5362 6 - 4077172 GAAGGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023170 6 - 7032639 GAAAGT i aotNan1.NW_018502359v1 C 0 I 10 s otoGar3.GL873537 22860988 6 + 28711273 AATAGT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146400 6 - 122082543 GCAAGC i mm10.chr11 C 0 C 0 s canFam3.chr9 21491979 6 + 61074082 GAGAAT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 523169 6 - 852752 CAAAGT i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2192814 10406 + 4244037 T e rheMac8.chr16 30135516 2040 - 77216781 I a score=13567.000000 s hg38.chr17_JH159148v1_alt 36011 2 + 88070 AA s panTro5.chr17 16347113 2 + 83181570 AA i panTro5.chr17 C 0 I 8 s panPan2.chr17 16251654 2 + 83442489 AA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099006 2 + 4267968 AA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083780 2 - 2193130 AA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997878 2 - 8458610 AA i cerAty1.NW_012006043v1 C 0 I 8 s chlSab2.chr16 64956479 2 + 75148670 AA i chlSab2.chr16 C 0 I 5266 s colAng1.NW_012122154v1 2205431 2 + 4569836 AA i colAng1.NW_012122154v1 C 0 I 8 s calJac3.chr5 46148726 2 - 159171411 AA i calJac3.chr5 C 0 I 8 s saiBol1.JH378271 1863523 2 + 3513951 AA i saiBol1.JH378271 C 0 I 3 s cebCap1.NW_016107543v1 5368 2 - 4077172 AA i cebCap1.NW_016107543v1 C 0 I 8 s otoGar3.GL873537 22860994 2 + 28711273 AA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146406 1 - 122082543 -A i mm10.chr11 C 0 C 0 s canFam3.chr9 21491985 1 + 61074082 -A i canFam3.chr9 C 0 C 0 e aotNan1.NW_018502359v1 7023176 10 - 7032639 I e manLeu1.NW_012106252v1 2192814 10406 + 4244037 T e dasNov3.JH570468 523175 0 - 852752 C e macNem1.NW_012014910v1 2106571 17 + 10377808 I e macFas5.chr16 28049939 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=-3987.000000 s hg38.chr17_JH159148v1_alt 36013 17 + 88070 TTTTCAGAAGAAAATTA s panPan2.chr17 16251656 2 + 83442489 GG--------------- i panPan2.chr17 C 0 C 0 s mm10.chr11 22146407 4 - 122082543 --TTCA----------- i mm10.chr11 C 0 C 0 s dasNov3.JH570468 523175 5 - 852752 ------------AAGTG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7023176 10 - 7032639 I e cebCap1.NW_016107543v1 5370 8 - 4077172 I e canFam3.chr9 21491986 0 + 61074082 C e manLeu1.NW_012106252v1 2192814 10406 + 4244037 T e otoGar3.GL873537 22860996 0 + 28711273 C e saiBol1.JH378271 1863525 3 + 3513951 I e calJac3.chr5 46148728 8 - 159171411 I e colAng1.NW_012122154v1 2205433 8 + 4569836 I e chlSab2.chr16 64956481 5266 + 75148670 I e cerAty1.NW_012006043v1 1997880 8 - 8458610 I e macNem1.NW_012014910v1 2106571 17 + 10377808 I e macFas5.chr16 28049939 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I e nomLeu3.chrUn_GL397460_1 2083782 0 - 2193130 C e gorGor5.CYUI01015385v1 4099008 0 + 4267968 C e panTro5.chr17 16347115 8 + 83181570 I a score=2298.000000 s hg38.chr17_JH159148v1_alt 36030 6 + 88070 TTTAAT s saiBol1.JH378271 1863528 6 + 3513951 TTTAAT i saiBol1.JH378271 I 3 I 5809 s mm10.chr11 22146411 5 - 122082543 -TTACT i mm10.chr11 C 0 C 0 s dasNov3.JH570468 523180 6 - 852752 TTTAAT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7023176 10 - 7032639 I e cebCap1.NW_016107543v1 5370 8 - 4077172 I e canFam3.chr9 21491986 0 + 61074082 C e manLeu1.NW_012106252v1 2192814 10406 + 4244037 T e otoGar3.GL873537 22860996 0 + 28711273 C e calJac3.chr5 46148728 8 - 159171411 I e colAng1.NW_012122154v1 2205433 8 + 4569836 I e chlSab2.chr16 64956481 5266 + 75148670 I e cerAty1.NW_012006043v1 1997880 8 - 8458610 I e macNem1.NW_012014910v1 2106571 17 + 10377808 I e macFas5.chr16 28049939 0 - 80997621 C e rheMac8.chr16 30135516 2040 - 77216781 I e nomLeu3.chrUn_GL397460_1 2083782 0 - 2193130 C e gorGor5.CYUI01015385v1 4099008 0 + 4267968 C e panPan2.chr17 16251658 0 + 83442489 C e panTro5.chr17 16347115 8 + 83181570 I a score=-17715.000000 s hg38.chr17_JH159148v1_alt 36036 35 + 88070 TTTCTGTTGCTTAATTTCTTAGTTTTCTGTTATTT s panPan2.chr17 16251658 7 + 83442489 --------GTTTAAT-------------------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099008 9 + 4267968 ------GGGTTTAAT-------------------- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083782 8 - 2193130 ------AGGTTTAA--------------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049939 11 - 80997621 ----AAGGGTTTAAT-------------------- i macFas5.chr16 C 0 I 1 s otoGar3.GL873537 22860996 8 + 28711273 ------GTGTTTAA--------------------- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146416 13 - 122082543 TATCTGGTGATAA---------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 21491986 10 + 61074082 -----GGTGCTTAAC-------------------- i canFam3.chr9 C 0 I 5 s dasNov3.JH570468 523186 6 - 852752 -------CATTCC---------------------- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018502359v1 7023176 10 - 7032639 I e cebCap1.NW_016107543v1 5370 8 - 4077172 I e manLeu1.NW_012106252v1 2192814 10406 + 4244037 T e saiBol1.JH378271 1863534 5809 + 3513951 I e calJac3.chr5 46148728 8 - 159171411 I e colAng1.NW_012122154v1 2205433 8 + 4569836 I e chlSab2.chr16 64956481 5266 + 75148670 I e cerAty1.NW_012006043v1 1997880 8 - 8458610 I e macNem1.NW_012014910v1 2106571 17 + 10377808 I e rheMac8.chr16 30135516 2040 - 77216781 I e panTro5.chr17 16347115 8 + 83181570 I a score=46788.000000 s hg38.chr17_JH159148v1_alt 36071 7 + 88070 TCTGTTG s panTro5.chr17 16347123 7 + 83181570 TCTGTTG i panTro5.chr17 I 8 C 0 s panPan2.chr17 16251665 6 + 83442489 -CTGTTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099017 6 + 4267968 -CTGTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083790 7 - 2193130 TCTGTTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049951 5 - 80997621 --TGTCT i macFas5.chr16 I 1 C 0 s cerAty1.NW_012006043v1 1997888 7 - 8458610 TCTGTTT i cerAty1.NW_012006043v1 I 8 C 0 s chlSab2.chr16 64961747 7 + 75148670 TCTGTTT i chlSab2.chr16 I 5266 C 0 s manLeu1.NW_012106252v1 2182408 7 + 4244037 TCTGTTT i manLeu1.NW_012106252v1 T 10406 C 0 s colAng1.NW_012122154v1 2205441 7 + 4569836 TCTGTTT i colAng1.NW_012122154v1 I 8 C 0 s calJac3.chr5 46148736 7 - 159171411 TCTGTTT i calJac3.chr5 I 8 C 0 s saiBol1.JH378271 1869343 7 + 3513951 TCTGTTT i saiBol1.JH378271 I 5809 C 0 s cebCap1.NW_016107543v1 5378 7 - 4077172 TCTGTTT i cebCap1.NW_016107543v1 I 8 C 0 s aotNan1.NW_018502359v1 7023186 7 - 7032639 TCTGGTT i aotNan1.NW_018502359v1 I 10 C 0 s otoGar3.GL873537 22861004 7 + 28711273 TCTGTTT i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22146429 0 - 122082543 C e canFam3.chr9 21491996 5 + 61074082 I e dasNov3.JH570468 523192 0 - 852752 C e macNem1.NW_012014910v1 2106571 17 + 10377808 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=2161043.000000 s hg38.chr17_JH159148v1_alt 36078 270 + 88070 CTTAATTGTAGTTTACTCATAGAAAG-TTTATTTTCGATAAA--AGGAAGCCCCTCTCAAC-ATCTGCATCGTTCCTGATGTGACCATCTTCTGATTATGTGAT--AGTTCCTG----GTGACCG--GTTAGGCTCAGGA--AGTTCTCTCTACCCAGCCTC-CTTCTTTGGTTGTATGTAG---ATTGGGAA-----GTGTCTGTTGCG----GG-----AAGCGTGA-------TGCTGATGTGTTCACAATGACTAAATGAATTCATATCTGTGGCCTAGATTGTTCAGCCACCAAAGTCTGATTC s panTro5.chr17 16347130 270 + 83181570 CTTAATTGTAGTTTACTCATAGAAAG-TTTGTTTTCGATAAA--AGGAAGCCCCTCTCAAC-ATCTGCATCGTTCCTGATGTGACCATCTTCTTATTATGTGAT--AGTTCCTG----GTGACCG--GTTAGGCTCAGGA--AGTTCTCTCTACCCAGCCTC-CTTCTTTGGTTGTATGTAG---ATTGGGAA-----GTGTCTGTGGGG----GG-----AAGCGTGA-------TGCTGATGTGTTCACAATGACTAAATGAATTCATATCTGTGGCCTAGATTGTTCAGCCACCAAAGTCTGATTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251671 270 + 83442489 CTTAATTGTAGTTTACTCATAGAAAG-TTTGTTTTCGATAAA--AGGAAGCCCCTCTCAAC-ATCTGCATCGTTCCTGATGTGACCATCTTCTTATTATGTGAT--AGTTCCTG----GTGACCG--GTTAGGCTCAGGA--AGTTCTCTCTACCCAGCCTC-CTTCTTTGGTTGTATGTAG---ATTGGGAA-----GTGTCTGTGGGG----GG-----AAGCGTGA-------TGCTGATGTGTTCACAATGACTAAATGAATTCATATCTGTGGCCTAGATTGTTCAGCCACCAAAGTCTGATTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099023 271 + 4267968 CTTAATTGTAGTTTACTCATAGAAAG-TTTGTTTTCGATAAA--AGGAAGCCCATCTCAACAATCTGCATCGTTCCTGATGTGACCATCTTCTGATTATGTGAT--AGTTCCTG----GTGACCG--GTTAGGCTCAGGA--AGTTCTCTCTACCCAGCCTC-CTTCTTTGGTTGTATGTAG---ATTGGGAA-----GTGTCTGTGGGG----GG-----AAGCGTGA-------TGCTGATGTGTTTACAATGACTAAATGAATTCGTATCTGTGGCCTAGATCGTTCAGCCACCAAAGTCTGATTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2083797 269 - 2193130 CTTAATTGTAGTTTACTCATAGAAA--TTTGTTTTCGATAAA--AGGAAGCCCATCTCATC-ATCTGCATCTTTCCTGATGTGACCATCTTCTGATTATGTGAT--AGTTCCTG----GTGACCG--GTTAGGCTCAGGA--AGTTCTCTCTACCCAGCCGC-CTTCTTTGGTTGTGTGTAG---ATTGGGAA-----GTGTCTGTGGGG----GG-----CAGCGTGA-------TGCTGATGTGTTCACAATGACTAAATGAATTCATGTCTGTGGCCTAGACTGTTCAGCCACCAAAGTCTGATTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28049956 269 - 80997621 CTTAATTGTG-TTTACTCATAGAAAC-TTTGTTTCAGATAAA--AGGAAGCCTGTCTCATC-ATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTGTT--TGTTCCTG----GTGACTG--GGGAGGTTCAGGA--AGTTCTCTCTACCCAGCCTC-TTTCTTTGGCTATACCTAG---GTTGGTAA-----GTGTCTGTGGGG----AG-----AAGCGCAA-------CGCTGATATGTTCACAATGACACAATGAATCCATACCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106588 269 + 10377808 CTTAATTGTG-TTTACTCATAGAAAC-TTTGTTTCAGATAAA--AGGAAGCCTGTCTCATC-ATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTGTT--TGTTCCTG----GTGACTG--GGGAGGTTCAGGA--AGTTCTCTCTACCCAGCCTC-TTTCTTTGGCTATACCTAG---GTTGGTAA-----GTGTCTGTGGGG----AG-----AAGCGCAA-------TGCTGATATGTTCACAATGACAAAATGAATCCATACCTGTGCTCAAGACTGTTCAGCCACCAAAATCTGATTC i macNem1.NW_012014910v1 I 17 C 0 s cerAty1.NW_012006043v1 1997895 270 - 8458610 CTTAATTGTGAATTACTCATAGAAAC-TTTGTTTCAGATAAA--AGGAAGGCAGTCTCATC-ATCGGCTTGGTTCCTGCTCTGACCATCATCTGGTCATGTGAT--AGTTCCTG----GTGACTG--GGGAGGCTCAGGA--AGTTCTCTCTGCCCAGTCTC-ATCCTTTGGCTCTATGTAG---ACTGGGAA-----GTGTCTGTGGGG----AG-----AAGCATGA-------TGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACCAAAGCTTGATTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64961754 269 + 75148670 CTTAATTGTGAATTACTCATAGAAAC-TTTGTTTCAGATGAA--AGGAAGCCCATCTCATC-ATCAGCATCATTCCTGCTCTGACAGTCCTCTGGTGATGTGAT--AGTTCCTG----GTGATCC--CGGAGGCTCAGGA--AGTTCCGTCTTCCCCGCCTC-AT-GGTTGTCTGTATGTGG---CCTGGGAA-----GTGTCTGTGGGG----AG-----AAGCATGA-------TGCTGATCTACTTACTGTAACAAAGGGAATCCATGCCTGGGCCCAAGACTACTCACCCAACAAATTCTGACTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182415 270 + 4244037 CTTAATTGTGAATTACTCATAGAAAC-TTTGTTTCAGATAAA--AGGAAGGCAGTCTCATC-ATCGGCTTGGTTCCTGCTCTGACCATCATCTGGTCATGTGAT--AGTTCCTG----GTGACTG--GGGAGGCTCAGGA--AGTTCTCTCTGCCCAGTCTC-ATCCTTTGGCTCTATGTAG---ACTGGGAA-----GTGTCTGTGGGG----AG-----AAGCATGA-------TGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACCAAAGCTTGATTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205448 269 + 4569836 CTTAATTGTGAATTACTCATAGAAAC-TTTGTTTCAGATAAA--AGGAAGGCAGTCTCATC-ATCAGCTTGGTTCCTGCTCTGACCATCATCTGGTCGTGTGAT--AGTTCCTG----GTGACTG--GGGAGGCTCAGGA--AGTTCTCTCTGCCCAGTCTC-ATCCTTTGGCTGTATGTAG---ACTGGGAA-----GTGTCTGT-GGG----AG-----GAGCATGA-------TGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACCAAAGTTTGATTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46148743 267 - 159171411 CTTAATTGTGAATTACTCACAGAAACTTTTGTTTCAGATAAA--AGGAAGCCCGTGTCATC-ATTAGCATGGTTCCTGCTCTGACCATCTTCTGGTCATGTGAT--AGTTCCTG----GTGACTG--GGAAGGCTC---A--AGTTCTCTCTA-GCAACCTC-CTTCTTTGGCTGTATGTAG---ATTGGGAA-----GTGTCTGCGGGG----AA-----AAGTGTGA-------CGCTCATATATTTATAGTGACCAAAGGAACCCATGTCTGTGCCCAAAACTGCTCAGCTACCAAAATCTGATTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1869350 266 + 3513951 CTTAATTGTTAATTACTCACAGAAAC-TTCGTTTCAGATAAA--AGGAAGCCCCTGTCATC-ATTAGCATGGTTCCTGCTCTGACCATCTTCTGGTCATGTGAT--AGTTCCTG----GTTACTG--GGGACGCTC---A--AGTTCTGTCTA-CCAACCTC-CTTCTTTGGCTGTATGTAG---ATTGGAAA-----GTGTCTGCAGGG----AA-----AAGTGTGA-------TGCACATATTTTTACAGTGACCAAAGGAACCCACGTCTGTGCCCAAAACTGCTCAGCCACCAAAGTCTGAATC i saiBol1.JH378271 C 0 I 460 s cebCap1.NW_016107543v1 5385 266 - 4077172 CTTAATTGTGAATTACTCACAGAAAC-TTTGTTTCAGATAAA--AGGAAGCCCATGTCATC-ACTAGCATGGTTCCTGCTCTGACCATCTTCTGGTCATGTGAT--AGTTCCTG----GTGACTG--GGGAGGCTC---A--AGTTCTCTCTA-CCAACCTC-CTTCCTTGGCTGTATGTAG---ATTGGGAA-----GTGTCTGTGGGG----AA-----AAGTGTGA-------TGCTCATATTTTTACAGTGACCAAAGGAAGCCATGTCTGTGCCCAAAACTGCTCAGCTACCAAAGTCTGATTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023193 265 - 7032639 CTTAATTGTGAATTACTCACAGAAAC-TCTGTTTCAGATGAA--AGGAAGCCCGTGTCATC-ATTAGCATGGTTCCTGCTCTGACCATCTTCTGGTCATGTGAT---GTTCCTG----GTGACTG--GGGAAGCTC---A--AGTTCTCTCTA-CCAACCTC-TTTCTTTGGCTGTATGTAG---ATTGGGAA-----ATGTCTGCGGGG----AA-----AAGTATGA-------TGTTCATATTTTTATAATGATCAAAAGAACCCATGTCTGTGCCAAAAACTGCTCAGCCACCAAAGTCTGATAC i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861011 272 + 28711273 CTTAATTGAGAATAACTCATCGAAAC-TTC-TTTTAGATAAA--AGAAAG----------C-ATT------GTGCCTGCTCTGGTCACCATCTGATCACATGAC--AGTTCCTG----CTGGCCT--GGGAGGGTCAAGA--GATTCACCCTGCTCA-CCTT-TTCCTGTGACCGTACGCAGTCAATTAGAAAAAAACGTGATTATAATG----AAATAATAAACATGGAAGTGTCTGCTGGTATGTTTACAGTGATGAACTGAATCCATGCCTGGGTCCAAGTCTGTTCACCCACAAAAGCCCGGCTC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146429 254 - 122082543 CTTACTTGAAG---ACTTACTTGAAG-TT--TTTCCAACAAATCAGGGATTCATCC----C-ACCAGTTTTGTTATAACTCTGATGGTCATCTGGGCCTTCGTT--AGCTCCTG----ACTGTAT--GGCAATATCAAGATTACTGTATTCTTGCAACCTTC-TCCCCATATCCCTACTTAG---AAGTATAA-----ATGTCTCTGCAT----AT-----GAGTGTGG-------TG------TATTCACAATCATG----GACTCCACACCTATTTCCCTGTCTTTTTGCCCG-CAATGTCCAATTC i mm10.chr11 C 0 C 0 s canFam3.chr9 21492001 270 + 61074082 -TTAATTGAGAGTAACTCATAGGAAC-ATTG--TCAGAGGGA--AGCAAGATGGTCACATT-AGCAGCCTCGCTCTTGCTTCCGGGGCCATGGGATCACGTGATGCAGTTCCTGGGAAGTGGTTG--GTGAGTC-----A--GTTTCGTGCTCCTTGCCCAG-TTAGTTTGGTTGCATGCAG---ACTAGGA------GTATCCCTGAGGTGAAGG-----GAGCTTGA-------TGGTGATATGTTCATAGTGATGAATTGCAATCATGCTGGAGCCCGAGTCTGTTTCCCCA-AAGTGCCTCATTC i canFam3.chr9 I 5 I 2 s dasNov3.JH570468 523192 264 - 852752 CTTAATTGAGA--TAGGTATAGAAAC-TGC-TTTCGGTTATG--AGGATGGTGGTCACCTC-CTCAGCATCATTCCCTGCCCCTTCATCATCTG-TCATGTGAT--AGTTCCCT----CTGGCCTGCGGTAGGTCCTAAC--AGTCGTTGCTCCCCAGCTTTATTCCTTTGGCTGTATTTAG---ATTGGCCA-----GTCTATCTGGGG----GC-----GTGCATGA-------TGCTTATATTTTCACAGTGACAAATTGGATCCCTGCCTGGAACTAACTTTGTTCACCCACTGAAGCCC----- i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=115197.000000 s hg38.chr17_JH159148v1_alt 36348 12 + 88070 AAGACTAACAGG s panTro5.chr17 16347400 12 + 83181570 AAGACTAACAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251941 12 + 83442489 AAGACTAACAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099294 12 + 4267968 AAGACTAACAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084066 12 - 2193130 AAGACTAAGAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28050225 11 - 80997621 -AGACTAACAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106857 12 + 10377808 AAGACTAACAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1998165 12 - 8458610 AAGGTTAACAGG i cerAty1.NW_012006043v1 C 0 T 6034 s chlSab2.chr16 64962023 12 + 75148670 AAGACTAACAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182685 12 + 4244037 AAGGTTAACAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205717 12 + 4569836 AGGGCTAACAGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149010 12 - 159171411 AAGGCTAACAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870076 12 + 3513951 AAGTCTAACAGG i saiBol1.JH378271 I 460 C 0 s cebCap1.NW_016107543v1 5651 12 - 4077172 AAGTCTAACAGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023458 12 - 7032639 AAGTCTAACAGG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861283 12 + 28711273 AAGACTAACAGG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146683 8 - 122082543 ----CAAACTGT i mm10.chr11 C 0 I 6 s canFam3.chr9 21492273 12 + 61074082 GACGCCCGCAGG i canFam3.chr9 I 2 C 0 e dasNov3.JH570468 523456 0 - 852752 C e rheMac8.chr16 30135516 2040 - 77216781 I a score=634771.000000 s hg38.chr17_JH159148v1_alt 36360 77 + 88070 CATTGCTCTCT--GTACAACCCACACCACCTGTGTCTTTCAGCTCCATCAAAGTCACTTGGGAAGAGGGTGATTGGTAC s panTro5.chr17 16347412 77 + 83181570 CATTGCTCTCT--GTACAACCCACACCACCTGTGTCTTTCAGCTCCATCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16251953 77 + 83442489 CATTGCTCTCT--GTACAACCCACACCACCTGTGTCTTTCAGCTCCATCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099306 77 + 4267968 CATTGCTCTCT--GTACAACCTACACCACCTGTGTCTTTCAGCTCCATCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084078 77 - 2193130 CATTGCTCTCT--GTACAATCCACACCACCTGTGTCTTTCAGCTCCATCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28050236 77 - 80997621 CATCTCTCTCT--GTACAACCCACACCACCTGTGTCTTTCAGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106869 77 + 10377808 CATCTCTCTCT--GTACAACCCACACCACCTGTGTCTTTCAGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992143 77 - 8458610 CATCTCTCTCT--GTACAACCCACACCACCTGTGTCTTTCGGTTCCCTCAAAGTCACTTGGGAAGAGGGTGATTGGTAC i cerAty1.NW_012006043v1 T 6034 I 70 s chlSab2.chr16 64962035 75 + 75148670 CATCTCTC--T--GTGCCACCCACACCACCTGTGTCTTTCAGTTCTTTGAACATCACTTGGGAAGAGGGTGTCTGGCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182697 77 + 4244037 AATCTCTCTAT--GTACGACCTACTTTACCTGTCTCTTCCAGTTCTACAAAAGCCACTTGGGAAGAGGGTGTTCGGCAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205729 76 + 4569836 CATCTCTCTAT--GTGAGACCTACTTAACCTGTCTCTTCCAGTTCTACAAAAGCCTCTT-GGAAGAGGATGTTTGGCAC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149022 75 - 159171411 --TATCTCTCT--GTAAAACACACACCACCTGTGTCTTTCAGTTCCATCAAAATCACTTGGGAAGAGGGTGTTTGGCAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870088 75 + 3513951 --CATCTCTCT--GTAGAACACACACCACCTGTGTCTTTCAGTTCCATCAAAATCACTTGGGAAGAGGGTGTTTGGTAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5663 73 - 4077172 --CATCTCTCT--GTAGA--ACACGTCACCCGTGTCTTTCAGTTCCACCAAAATCACTTGGGAAGAGGGTGTTTGGCAC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023470 75 - 7032639 --CATCTCTGT--GTAGAACACACACCACCTGTGTCTTTCAGTTCCATCAAAATCACTTGGGAAGAGGGTGTTTGGCAC i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861295 56 + 28711273 ----CATCTCT--GTACAACCTACTCCACCCATGTCTCCCAGTTCTGTCAAA-----------------CATTTGGCAC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146697 77 - 122082543 TGTCAATCTCT--GTGTAAATTCCTCTCACTGTGTATCTGAGGCATAGTAAGGGTGCTGTGAGCTAGGGTTTCTGGAAC i mm10.chr11 I 6 C 0 s canFam3.chr9 21492285 79 + 61074082 CATCTGTCTCTTGGAGCACCCTACCTCGTTTGCATAGGGCAGTGCATTCAAAGACACTTGGGTGGAGGACATCTGGCAT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 523456 77 - 852752 CATTTTTCTCC--ATTGTAACAACTTCTCCGGCAAATCCCTGTTTTATCAAAGATATTTGGGTAGATGTTGTTTAGCAT i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30135516 2040 - 77216781 I a score=181902.000000 s hg38.chr17_JH159148v1_alt 36437 21 + 88070 AATGTGTTTTATGTGTCAGAG s panTro5.chr17 16347489 21 + 83181570 AATGTGTTTTATGTGTCAGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252030 21 + 83442489 AATGTGTTTTATGTGTCAGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099383 21 + 4267968 AATGTGTTTTATGTGTCAGAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084155 21 - 2193130 AGTGTATTTTACGTGTCAGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28050313 20 - 80997621 -GTGCATCCTGTGTGTCAGAG i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2106946 20 + 10377808 -GTGCATTCTGTGTGTCAGGG i macNem1.NW_012014910v1 C 0 I 1 s chlSab2.chr16 64962110 21 + 75148670 AGTGTGTTCCATGTGGCGGAG i chlSab2.chr16 C 0 I 5414 s manLeu1.NW_012106252v1 2182774 21 + 4244037 AATGTATTCCATGTGGCAGAG i manLeu1.NW_012106252v1 C 0 I 1 s colAng1.NW_012122154v1 2205805 21 + 4569836 AATGTGTTCCACGTGGCAGAG i colAng1.NW_012122154v1 C 0 I 1 s calJac3.chr5 46149097 21 - 159171411 AGTGTGTTCTATGTGGCAGAG i calJac3.chr5 C 0 I 1 s saiBol1.JH378271 1870163 21 + 3513951 AGTGTGTTCTATGTGGCAGAG i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 5736 21 - 4077172 CGTGTGTTCTATGTGGCAGAG i cebCap1.NW_016107543v1 C 0 I 1 s aotNan1.NW_018502359v1 7023545 21 - 7032639 AGTGTGTTCTATGTGACAGAG i aotNan1.NW_018502359v1 C 0 I 1 s otoGar3.GL873537 22861351 21 + 28711273 CGTGTGTTTCATGTGGCAGAG i otoGar3.GL873537 C 0 I 1 s mm10.chr11 22146774 19 - 122082543 AATGTGTTTCA--TAGCAGAG i mm10.chr11 C 0 I 9 s canFam3.chr9 21492364 21 + 61074082 CATGTCTTCCATATGTCAAGG i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 523533 21 - 852752 AATCTCTTCCACATGGCAAAT i dasNov3.JH570468 C 0 I 1 e cerAty1.NW_012006043v1 1992220 70 - 8458610 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=78370.000000 s hg38.chr17_JH159148v1_alt 36458 12 + 88070 AGAACCAAAGCA s panTro5.chr17 16347510 12 + 83181570 AGAACCAAATCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252051 12 + 83442489 AGAACCAAATCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099404 12 + 4267968 AGAACCAAAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084176 12 - 2193130 AGAACCAAAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28050334 12 - 80997621 AGAATCAAAGCA i macFas5.chr16 I 1 C 0 s macNem1.NW_012014910v1 2106967 12 + 10377808 AGAATCAAAGCA i macNem1.NW_012014910v1 I 1 C 0 s manLeu1.NW_012106252v1 2182796 12 + 4244037 AGAGCCAAAGCA i manLeu1.NW_012106252v1 I 1 T 6170 s colAng1.NW_012122154v1 2205827 12 + 4569836 AGAACCAAAGCA i colAng1.NW_012122154v1 I 1 C 0 s calJac3.chr5 46149119 12 - 159171411 AGAATCGAAGTA i calJac3.chr5 I 1 C 0 s saiBol1.JH378271 1870185 12 + 3513951 AGAATCAAAGTC i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 5758 12 - 4077172 AGAATTGAAGTA i cebCap1.NW_016107543v1 I 1 C 0 s aotNan1.NW_018502359v1 7023567 12 - 7032639 AGAATGGAAGTA i aotNan1.NW_018502359v1 I 1 C 0 s otoGar3.GL873537 22861373 12 + 28711273 CGAGCCAGAGTA i otoGar3.GL873537 I 1 C 0 s mm10.chr11 22146802 12 - 122082543 TAAACCAATACT i mm10.chr11 I 9 I 5 s canFam3.chr9 21492386 11 + 61074082 CGAATCGA-GCA i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 523555 12 - 852752 AGAAGCAAAACA i dasNov3.JH570468 I 1 C 0 e chlSab2.chr16 64962131 5414 + 75148670 I e cerAty1.NW_012006043v1 1992220 70 - 8458610 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=81188.000000 s hg38.chr17_JH159148v1_alt 36470 11 + 88070 GGTGGGTACAA s panTro5.chr17 16347522 11 + 83181570 GGTGGGTACAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252063 11 + 83442489 GGTGGGTACAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099416 11 + 4267968 GGTGGGTACAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084188 11 - 2193130 GGTGGGTACAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28050346 11 - 80997621 GGTGGGTACAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106979 11 + 10377808 GGTGGGTACAA i macNem1.NW_012014910v1 C 0 C 0 s colAng1.NW_012122154v1 2205839 11 + 4569836 AACAGGTAGAA i colAng1.NW_012122154v1 C 0 I 3 s calJac3.chr5 46149131 11 - 159171411 GATGGGTACAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870197 11 + 3513951 GGTGGGTACAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5770 11 - 4077172 GGTGGGAACAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023579 11 - 7032639 GATGGGTACAA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861385 11 + 28711273 GGTTGGCAGAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146819 11 - 122082543 AATGAaaacaa i mm10.chr11 I 5 I 20 s canFam3.chr9 21492397 11 + 61074082 GGTGGATAGAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 523567 11 - 852752 AGTAGATAGAA i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2182808 6170 + 4244037 T e chlSab2.chr16 64962131 5414 + 75148670 I e cerAty1.NW_012006043v1 1992220 70 - 8458610 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=140349.000000 s hg38.chr17_JH159148v1_alt 36481 26 + 88070 ---AGAGAAGTCCAG----TGTGATTTAGA--TAA s panTro5.chr17 16347533 26 + 83181570 ---GGAGAAGTCCAG----TGGGATTTAGA--TAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252074 26 + 83442489 ---GGAGAAGTCCAG----TGGGATTTAGA--TAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099427 26 + 4267968 ---GGAGAAGTCCAG----TGGGATTTAGA--TAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084199 26 - 2193130 ---GGAGAAGTCCAG----TGGGATTTAGA--TAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28050357 26 - 80997621 ---GGAGAAGTCCAG----TGGGATTTAGA--TAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2106990 26 + 10377808 ---GGAGAAGTCCAG----TGGGATTTAGA--TAG i macNem1.NW_012014910v1 C 0 C 0 s chlSab2.chr16 64967545 26 + 75148670 ---AGAGAATTCCAC----TGGGATTTAGA--GAG i chlSab2.chr16 I 5414 C 0 s colAng1.NW_012122154v1 2205853 26 + 4569836 ---GGAGGAGTTCAC----TGGAATTCATG--AAG i colAng1.NW_012122154v1 I 3 T 6247 s calJac3.chr5 46149142 26 - 159171411 ---AGAGAAGTCCAC----TGGGATTTAGA--CAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870208 26 + 3513951 ---GGAGAAGTCCAC----TGGGATTTAGA--TAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5781 26 - 4077172 ---GGAGAAGTCCAC----TGGGATTTAGA--TAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023590 26 - 7032639 ---AGAGAAGTCCGC----TGGGATTTAGA--TAG i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861396 26 + 28711273 ---GAAGCAGCAAAC----CAGGACTAGGA--AGG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146850 30 - 122082543 ---acaaacaCCCAGCACTTAGGAATAAGC--AGA i mm10.chr11 I 20 C 0 s canFam3.chr9 21492408 15 + 61074082 ------------------ACAGGACTAAAC--CAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 523578 31 - 852752 GAAGAAGAATTACCC----TGGAATTCAGAATTAA i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2182808 6170 + 4244037 T e cerAty1.NW_012006043v1 1992220 70 - 8458610 I e rheMac8.chr16 30135516 2040 - 77216781 I a score=1371964.000000 s hg38.chr17_JH159148v1_alt 36507 153 + 88070 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtctgg---gagtgagggactt--------------------ac-caggatgagaatg---------------tgggactttctgtaacat-aactactttagattcaggcaaacctgcatgagctgTA---GCTCTAGCC----CTAACTCTGG---------------TA s panTro5.chr17 16347559 157 + 83181570 CATCAGGCAATCTTTGCCCTGgggtgacca----ttcatcttgatt-------------agtctgg---gagtgagggactt--------------------ac-caggatgataatg---------------tgggactttctgtcacat-aactgctttagattcaggcaaacctgcatgagctgTG---GCTCTAGCCCTAACTAACTCTGG---------------TA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252100 157 + 83442489 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------agtctgg---gagtgagggactt--------------------ac-caggatgataatg---------------tgggactttctgtcacat-aactgctttagattcaggcaaacctgcatgagctgTG---GCTCTAGCCCTAACTAACTCTGG---------------TA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099453 153 + 4267968 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtttgg---gagtgagggactt--------------------ac-caggatgagaatg---------------tgggactttctgtaacat-aactgctttagattcaggcaaacctgcaggagCCGTG---GCTCTAGCC----CTAACTCTGG---------------TA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084225 154 - 2193130 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcctgatt-------------tgtctgg---gagtgacgggctt--------------------acgcaggatgagaata---------------cggggctttctgtaacat-aactgctttagattcaggcaaacctgcatgagctgTg---gctctagcc----ctaactctgg---------------ta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137556 153 - 77216781 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtctgg---gagtgatgggctt--------------------ac-caggatgagaatg---------------tgggactttGTGTAACAT-AACTACTTTAGATTTAGTCAAACCAGCCTGAATTGTG---GCTCTAGCC----CTAACTCTGG---------------TA i rheMac8.chr16 I 2040 C 0 s macFas5.chr16 28050383 153 - 80997621 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtctgg---gagtgatgggctt--------------------ac-caggatgagaatg---------------tgggactttGTGTAACAT-AACTACTTTAGATTTAGTCAAACCAGCCTGAATTGTG---GCTCTAGCC----CTAACTCTGG---------------TA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107016 153 + 10377808 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtctgg---gagtgatgggctt--------------------ac-caggatgagaatg---------------tgggactttGTGTAACAT-AACTACTTTAGATTTAGTCAAACCAGCCTGAATTGTG---GCTCTAGCC----CTAACTCTGG---------------TA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992290 153 - 8458610 CATCAGGCAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtctgg---gagtgatgggctt--------------------ac-caggatgagaatg---------------tgggactttGTGTAACAT-AACTACTTTAGATTTAGTCAAACCAGTCTGAATTGTG---GCTCTAGCC----CTAACTCTGG---------------TA i cerAty1.NW_012006043v1 I 70 C 0 s chlSab2.chr16 64967571 154 + 75148670 CATAAAGCAATCTATCCCCTGGGGCGACCA----TTCGTTCTGACT-------------TACCTGT---GAGTGTGGTGATT--------------------AC-CAGGATGAGAATG---------------TAGGACTTTCTATCACGT-AACTGGTTGAGATTCAGACCAACCAGCATGTGCTGTG---GCTCTAGCC----TTAAACCTAG--------------TTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2176638 153 + 4244037 CATCAGGCAATCTTTGCCCTGgggtgacca----ttcatcttgatt-------------tgtctgg---gagtgatgggctt--------------------ac-caggatgagaatg---------------tgggactttGTGTAACAT-AACTACTTTAGATTTAGTCAAACCAGCCTGAATTGTG---GCTCTAGCC----CTAACTCTGG---------------TA i manLeu1.NW_012106252v1 T 6170 C 0 s colAng1.NW_012122154v1 2199632 153 + 4569836 CATCAGGGAATCTTTGCCCtggggtgacca----ttcatcttgatt-------------tgtctgg---gagtgatgggctt--------------------ac-caggatgagaatg---------------tgggactttGTGTAACAT-AACTACTTTAGATTTAGTCAAACCAGCCTGAATTGTG---GCTCTAGCC----CTAACTCTGG---------------TG i colAng1.NW_012122154v1 T 6247 C 0 s calJac3.chr5 46149168 153 - 159171411 CATCAAGCAATCTTTGCCCtggggtgacca----ttcatcctgatt-------------tgtctgg---gagtgaggggctt--------------------ac-caggaatagaatg---------------taggactttctgtgacat-aactgctttagattgaggccaaccagcatgagctgTG---TCTC-AGCT----CTGATCCTGG--------------TTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870234 153 + 3513951 CATCAAGCAATCTTTGCCCTGGTgtgaccc----ttcgtcctgatt-------------tgtctgg---gagtgaggggctt--------------------ac-caggaatagaatg---------------taagactttctatgacat-aactgctttggattcaggccaaccagcatgagCCGTG---GCTC-AGCC----ATAAGCCTGG--------------TTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5807 153 - 4077172 CATCAAGCACTCTTTGTCCTGgggtgacca----ttcattctgatt-------------tgtctgg---gagtgaggggctt--------------------ac-caggaatagaatg---------------taggactttcTCTGACAT-AACTGCTTTAGATTCAGACCAACCAGCATGAGCCATG---TCTC-AGCC----CTAATCCTGG--------------TTA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023616 153 - 7032639 CGTCAAGCAATCTTTGCCCtggggtgacca----ttcatcctgctt-------------tgtctgg---gagtgaggggctt--------------------ac-caggaatagaatg---------------taggactttctatgacat-aactgCTTTAGATTGAGGCCAACCTGCATGAGCGGTG---GCTC-AGCC----CTAAGCCTGG--------------TTA i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861422 163 + 28711273 TGTCA------TTTTAC----AGGTGACCA----TTCACTTTGGTT-------------TGCCTGGACTGAATGAATAGTTC--------------------AC-AACAGTGAGAATA---------------TGAGATCTTTTGTGATAT-GATCACCATAGATCCAGGGAAACCAGCATAAACTGAGGACGCTT-AGCC----CTAACCCTGGATATGGGGGTTTGGTTA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146880 194 - 122082543 CATCAGGGGATGTGT------GGGTGAGCA----TGAGTCTTGACTCTGACTGGGGCAGCTCCTGG---GGTAGATGTACTTTTAGCTTTAGAGCCAGACAAAC-TGGAGTGGGCAAGATGACTCCAGTGCACAGGGGCTGTCTGCAGCATCAAGGATCTTAGACT--GGTGATCTTTCCCATGATTCT---CTTTTACTT----CTAACCCTAT---------------CT i mm10.chr11 C 0 C 0 s canFam3.chr9 21492423 141 + 61074082 CATCCATGAACATACTTCCT-gagtgaccagcgtcctgctctgatt-------------tacccag---aaatgggtgtttt--------------------cc-cagg------ccg---------------tgggccgttcagtggtat-aagtggggcagtttgggatgagtcgg---------tg---accctCGTC----CTAACCTTGT---------------TA i canFam3.chr9 C 0 T 11546 s dasNov3.JH570468 523609 127 - 852752 --------------CAACCTGAAGT--TCC----ACCATCCTTGTT-------------TCACCAG---GGCTGTGGG--TT--------------------CC-CATG------ATG---------------TGGGGCTTTG-GTGATCA-AACTTGGTGTGGTTTAGGAAACCCAG-ATGAGATTCC---AGTCTAGTC----CTGACTTGTG---------------TC i dasNov3.JH570468 C 0 C 0 a score=79502.000000 s hg38.chr17_JH159148v1_alt 36660 10 + 88070 CTAACA--CAAT--- s panTro5.chr17 16347716 10 + 83181570 CTAACA--CAAT--- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252257 10 + 83442489 CTAACA--CAAT--- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099606 10 + 4267968 CTAACA--CACT--- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084379 10 - 2193130 ctaaca--cagt--- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137709 10 - 77216781 CTAGCA--TAGT--- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050536 10 - 80997621 CTAGCA--TAGT--- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107169 10 + 10377808 CTAGCA--TAGT--- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992443 10 - 8458610 CTAGCA--TAGT--- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967725 10 + 75148670 CTAGCA--CAGT--- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2176791 10 + 4244037 CTAGCA--TAGT--- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199785 10 + 4569836 CTAGCA--TAGT--- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149321 10 - 159171411 CCAGCA--CAGT--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870387 10 + 3513951 CCAGCA--CAGT--- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5960 10 - 4077172 ACAGCA--CAGT--- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023769 10 - 7032639 CCAGCA--CAGT--- i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861585 10 + 28711273 CTAACT--GAAT--- i otoGar3.GL873537 C 0 I 110 s mm10.chr11 22147074 6 - 122082543 CT------CTGT--- i mm10.chr11 C 0 C 0 s canFam3.chr9 21481018 10 + 61074082 TTAACA--TATT--- i canFam3.chr9 T 11546 I 14 s dasNov3.JH570468 523736 15 - 852752 CTACCACTCAGTAAC i dasNov3.JH570468 C 0 C 0 a score=68085.000000 s hg38.chr17_JH159148v1_alt 36670 9 + 88070 ---CAGGGCCAT s panTro5.chr17 16347726 9 + 83181570 ---CAAGGCCAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252267 9 + 83442489 ---CAAGGCCAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099616 9 + 4267968 ---CAGGGCCAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084389 9 - 2193130 ---cagggccat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137719 9 - 77216781 ---CAGTGCCAT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050546 9 - 80997621 ---CAGTGCCAT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107179 9 + 10377808 ---CAGTGCCAT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992453 9 - 8458610 ---CAGTGCCAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967735 9 + 75148670 ---TAGCGTCAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2176801 9 + 4244037 ---CAGTGCCAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199795 9 + 4569836 ---CGTTGCCAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149331 9 - 159171411 ---CCGTGCCAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870397 9 + 3513951 ---CAGTGCCAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5970 9 - 4077172 ---CAGTGCCAT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023779 9 - 7032639 ---CAGTGCCAT i aotNan1.NW_018502359v1 C 0 C 0 s mm10.chr11 22147080 8 - 122082543 ----CCGGCCTT i mm10.chr11 C 0 I 2 s canFam3.chr9 21481042 9 + 61074082 ---ATGCACTAT i canFam3.chr9 I 14 I 1 s dasNov3.JH570468 523751 12 - 852752 CTCAAGGGACAC i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22861595 110 + 28711273 I a score=45730.000000 s hg38.chr17_JH159148v1_alt 36679 6 + 88070 TTCTTC s panTro5.chr17 16347735 4 + 83181570 TTCT-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252276 4 + 83442489 TTCT-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099625 4 + 4267968 TTCT-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084398 6 - 2193130 ttcttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137728 6 - 77216781 TTCTTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050555 6 - 80997621 TTCTTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107188 6 + 10377808 TTCTTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992462 6 - 8458610 TTCTTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967744 6 + 75148670 CTCTTC i chlSab2.chr16 C 0 T 5394 s manLeu1.NW_012106252v1 2176810 6 + 4244037 TTCTTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199804 6 + 4569836 TTCTTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149340 6 - 159171411 TTCTTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870406 6 + 3513951 TTCTTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5979 6 - 4077172 TTCTTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023788 6 - 7032639 TTCTTC i aotNan1.NW_018502359v1 C 0 C 0 s otoGar3.GL873537 22861705 6 + 28711273 ttcttc i otoGar3.GL873537 I 110 C 0 s mm10.chr11 22147090 6 - 122082543 TCCTTC i mm10.chr11 I 2 I 6 s canFam3.chr9 21481052 5 + 61074082 TTTTG- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 523763 6 - 852752 ACCTGC i dasNov3.JH570468 C 0 C 0 a score=2036244.000000 s hg38.chr17_JH159148v1_alt 36685 233 + 88070 --TCTCTCTGTCTATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATACCTGATTTGTCTTGGAGTTCCAACATA-TTTAAACATTTTTTA---GGTATACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTTCCAACT-----TGATATA-----AC-------TGTAAATACATCTGTGTTCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCCCTTTCAGTTATATTTCCTTACTCATCCC s panTro5.chr17 16347739 231 + 83181570 ----TCTCCGTCTATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATACCTGATTTGTCTTGGAGTTCTAACATA-TTTAAACATTTTTTA---GGTATACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTTCCAACT-----TGATATA-----AC-------TGTAAATACATCTGTGTTCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCGCTTTCAGTTATATTTCCTTACTCATCCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252280 231 + 83442489 ----TCTCCGTCTATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATACCTGATTTGTCTTGGAGTTCTAACATA-TTTAAACATTTTTTA---GGTATACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTTCCAACT-----TGATATA-----AC-------TGTAAATACATCTGTGTTCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCGCTTTCAGTTATATTTCCTTACTCATCCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099629 231 + 4267968 ----TCTCTGTCTATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATACCTGATTTGTCTTGGAGTTCTAACATA-TTTAAACATTTTTTA---GGTATACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTTCCAACT-----TGATATA-----AC-------TGTAAATACATCTGTGTTCCCATTACCAGGTTAGGAAATAGAAATTAATCCCATTCCCTTTCAGTTATATTTCCTTACTCATCCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084404 233 - 2193130 --tctctctgtctatttctttttaatgaaggaattagatgagttgagatgatacctgatttgtcttggagttctaacatA-TTAAAACATTTTTAA---GGTATCCCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTTCCAACT-----TGATATA-----AC-------TGTAAATACATCTGTGTTCCCATTACCGGGTTAGGAAATAGAAATTAATCCCATTCCCTTTCAGTTATATTTCCTTACTCATCCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137734 225 - 77216781 --TCTCTTTCTCCATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCCAACATA-TTAAAACATTGTTTA---GGTGCACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTCCCAATT-----TGATATA-----ACTT-----TGTAAATACATCTATGTTCCCATTACTGGGTTATGAAATAGAAATTAATCCCATTCCCTTTCAG----------TTACTCATCCC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050561 225 - 80997621 --TCTCTTTCTCCATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCCAACATA-TTAAAACATTGTTTA---GGTGCACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTCCCAATT-----TGATATA-----ACTT-----TGTAAATACATCTATGTTCCCATTACCGGGTTATGAAATAGAAATTAATCCCATTCCCTTTCAG----------TTACTCATCCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107194 225 + 10377808 --TCTCTTTCTCCATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCCAACATA-TTAAAACATTGTTTA---GGTGCACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTCCCAATT-----TGATATA-----ACTT-----TGTAAATACATCTATGTTCCCATTACTGGGTTATGAAATAGAAATTAATCCCATTCCCTTTCAG----------TTACTCATCCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992468 225 - 8458610 --TCTCTTTCTCCATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCTAACATA-TTAAAACATTGTTTA---GGTGCACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTCCCAATT-----TGATATA-----ACTT-----TGTAAATACATCTATGTTCCCATTACCGGGTTACGAAATAGAAATTAATCCCATTCCCTTTCAG----------TTACTCATCCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962356 241 + 75148670 --TCTCTCTACATATTTCTTTTTAATGAAGCAATTAGATGAGCTGAGATGATACCTGATTCATCGTGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGCAAGGT-ATTAATTTCCAACT-----TGATATAGTATTATAT-----TGTAAATATATTTAAGGCCCCATTACCCGATTAGGAAATAGAAATTAATCCCATTCTCTCCTAATTATATCCTCTTACTCATTCC i chlSab2.chr16 T 5394 C 0 s manLeu1.NW_012106252v1 2176816 225 + 4244037 --TGTCTTTCTCCATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCTAACATA-TTAAAACATTGTTTA---GATGCACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTCCCAATT-----TGATATA-----ACTT-----TGTAAATACATCTATGTTCCCATTACCGGGTTACGAAATAGAAATTAATCCCATTCCCTTTCAG----------TTACTCATCTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2199810 225 + 4569836 --TCTCTTTCTCCATTTCTTTTTAATGAAGGAATTAGATGAGTTGAGATGATATCTGATTCGTCTTGGAGTTCTAATATA-TTAAAACATTGTTTA---GAAGCACCATTCATTTTGGAAGAA-TGCAAATT-ATTAATTCCCAATT-----TGATATA-----ACTT-----TGTAAATACATCTATGTTCCCATTAGCGGGTTACGAAATAGAAATTAATCCCATTCCCTTTCAG----------TTACTCATCCC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149346 226 - 159171411 ----------TGTATTTC-TTTTAATGAAGGAATTAGTTGAGTTGAGATGACACCTGATTCATCTTGGAATTGTAACATA-GTTAAACATTATTTA---GGTACAGAATTCATTTAGGAAGAA-TGTAAATT-ATGAATTTTCAACT-----TGAGCTA-----ACTT-----TGTAAATACATCTGTGATCCCGTTACCAGGTTAGGAAACAGAAATTAATCCCATTCCCTTTAGATTATATTCTCTTACTCATTAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870412 226 + 3513951 ----------TGCATTTC-TTTTAATGAAGGAATTAGGTGAGTTGAGATGACCCCTGTTTCGTCTTGGAGTTCCAACATA-TTTAAACATTTTTTA---GGTACACAATTCATTTAGGAAGAA-TGCCAATT-ATTAATTTCTGACT-----TGAGATA-----ACTT-----TGTAAATACATCGTTGATCCCATTACCAAGTTAGGAAACAGAAATTAATCCCATTCCCTTTAGATTATATTCTCTTTCTCATTAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5985 223 - 4077172 ----------TGTATTTC-TGTTCATGAAGGAATTAAGTTAGTTGAGACGACACCTGATTTGTC-TGGAGTTGTAACATG-TTTAAACATTTTTCA---GGTACATGATTCATTTAGGAAGAA-TGCCAATT-TTTAATTTCTGACT-----TGAGATT-----GCTT-----TGTAAATGCATC--TGATTCCATTACCAGGTTAGGAAACAGAAATTAATCCCATTCCCTTTAAATTATATTCTCTTACTCATTAT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018502359v1 7023794 226 - 7032639 ----------TGTATTTC-TTTTAATGAAGGAATTAGGTGAGTTGAGAATACATCTAATTCTTTTTGGAATTTTAACATA-TTTATACATTTTTCA---GGTACACAATTCATTTAGGAAGAA-TGCAAATT-ATGAATTTCCAACT-----TGAGATA-----ACTT-----TGTAAATACATCTGTGATCCCACTACCAGGTTAGGAAACAGAAATTAATCCCATTCCCTTTAGATTATATTCTCTTACTCATTAC i aotNan1.NW_018502359v1 C 0 N 0 s otoGar3.GL873537 22861711 241 + 28711273 --tttttctctcttttgctttTCAATGAGGGAATTAGATTAGTTGCAGTGATACCTGATTTGCCTTTGTGATCTAACATA-TT--AACATTTTGGGGGTGGTATACCACTTTTTAAAAAAGAAGCGCAAATTAACTAATTTCCAGCTATAGAGAATATC-----ACAA-----AGTGAATACATCCCTGTCACTATAACCAAGTTAGG--ATGTAAATTAATTCCCCTCCTTCCAAATTACATCCTCTTACTCATCCC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22147102 223 - 122082543 ---CATTTCTTTTCTTTCTATTCCATGAAGGAATCATGT-ACCTAATTTATTACCCATTTCACCTGTGAGGACCAAGATA-T---GCCCCCTTCCT---TTTCTACTACTCATACTAATA-AA-TGTAAATT-ATTAATTTCTCATT-----TGAGAGA-----ATAA---AGAGCAAACACAGCCATACCAGTATTA-------AAGAAATGGAAACCAA-CCCAGTTCCTACAAATCATTTCATGTCACTCACCCC i mm10.chr11 I 6 C 0 s canFam3.chr9 21481057 187 + 61074082 -------TTTTCTCCTATTTTTAATTGAAGGGG--------------------------TAGTCTTGGTG-------ATA-GTGCTCCTTTTTATA---AAT-TATAATACATT-------AA-----AATC-GATAATTTCAAATC-----TGATAGA-----ATATCACCGAGTGAACCC--CCATGTCGCTATTACCAGGTTAACAAAAAGAACTTAATTTAATCCCCTTCAAATTATAATCC-TTATTATTCCC i canFam3.chr9 C 0 T 3101 s dasNov3.JH570468 523769 181 - 852752 CACCCAACCCTGCACTTTTTCTTCATGAGGGAGTTAGATTAGATCACAT---ACCTGACATTTCTTTGAATTCTAACATA-T----------TTTA--------------------------A----------ACTAATATTCTCCT-----AAAGATA-----ACAT--------------ATCTGTGTCGATATAATCAAGTTTTTAAACAGAACATAAACCCACAGTCT-CAAATTATGCTaccactctcctc-- i dasNov3.JH570468 C 0 C 0 a score=256662.000000 s hg38.chr17_JH159148v1_alt 36918 32 + 88070 CCAAAACCG----CTAATCACTCTATCAAG---TTGTAA s panTro5.chr17 16347970 32 + 83181570 CCAAAGCCG----CTAATCACTCTATCAAG---TTGTAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252511 32 + 83442489 CCAAAGCCG----CTAATCACTCTATCAAG---TTGTAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099860 32 + 4267968 CCAAAACCG----CTAATCACTCTATCAAG---TTGTAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084637 32 - 2193130 CCAAAACTG----CTAATCACTGTATCAAA---TTGTAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137959 31 - 77216781 CCAA-ACCG----CTCATCACTCTGTCAAG---TTGTAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050786 31 - 80997621 CCAA-ACCG----CTCATCACTCTGTCAAG---TTGTAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107419 31 + 10377808 CCAA-ACTG----CTCATCACTCTGTCAAG---TTGTAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992693 31 - 8458610 CCAA-ACCG----CTCATCACTCTGTCAAG---TTGTAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962597 32 + 75148670 CAAAGACAG----CTAATCACTCTATCAAG---TTGTAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177041 31 + 4244037 CCAA-ACCG----CTCATCACTCTGTCAAG---TTGTAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200035 31 + 4569836 CCAA-ACTG----CTCATCACTCTGTCACG---TTGTAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149572 32 - 159171411 CCAAAACAG----ATAATCCCTCTATCAAG---TTCTAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870638 32 + 3513951 CCAAAACAG----ATAATCCCTCTATCAAG---TTTTAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6208 32 - 4077172 CCCAAACAG----ATAATCCTTCTATCAAG---TTGTAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 0 32 - 94492 CCAAAACAG----ATAATCCCTCTATCAAG---TTGTAA i aotNan1.NW_018505111v1 N 0 C 0 s otoGar3.GL873537 22861952 32 + 28711273 ----AATAGGTCCCTAATCTCTCTATTGAT---TTGTAA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22147325 33 - 122082543 CAAAGGCTG----TTCCTACTACCATCCAGGGTCTGT-- i mm10.chr11 C 0 C 0 s dasNov3.JH570468 523950 28 - 852752 tcaa----g----ataatcactgtactaac---ttgcaa i dasNov3.JH570468 C 0 I 66269 e canFam3.chr9 21481244 3101 + 61074082 T a score=126540.000000 s hg38.chr17_JH159148v1_alt 36950 13 + 88070 CCCTGTAGGTCAA s panTro5.chr17 16348002 13 + 83181570 CCCTGTAGGTCAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252543 13 + 83442489 CCCTGTAGGTCAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099892 13 + 4267968 CCCTGTAGGTCAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084669 13 - 2193130 CCCTGTAGGTCAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30137990 13 - 77216781 CCCTGTAGGTCAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050817 13 - 80997621 CCCTGTAGGTCAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107450 13 + 10377808 CCCTGTAGGTCAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992724 13 - 8458610 CCCTGTAGGTCAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962629 13 + 75148670 TCCAGTAGGTAAC i chlSab2.chr16 C 0 I 5407 s manLeu1.NW_012106252v1 2177072 13 + 4244037 CCCTGTAGGTCAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200066 13 + 4569836 CCCTGTAGGTCAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149604 13 - 159171411 CACTGTAGTTCAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870670 13 + 3513951 CACTGTAGTTCAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6240 13 - 4077172 CACTGTAGTCCAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 32 13 - 94492 CACTGTAGTTCAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861984 13 + 28711273 CACTGTAGATACA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22147358 11 - 122082543 --TTGTCGTCCAG i mm10.chr11 C 0 C 0 e canFam3.chr9 21481244 3101 + 61074082 T e dasNov3.JH570468 523978 66269 - 852752 I a score=206348.000000 s hg38.chr17_JH159148v1_alt 36963 24 + 88070 TTTGGC--TTTT----CCTTTTTTACTTCT s panTro5.chr17 16348015 24 + 83181570 TTTGGC--TTTT----CCTTTTTCACTTCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252556 24 + 83442489 TTTGGC--TTTT----CCTATTTCACTTCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099905 24 + 4267968 TTTGGC--TTTT----CCTTTTTTACTTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084682 24 - 2193130 TTTGGC--TTTT----CCTTTTTTACTTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138003 24 - 77216781 TTTGGC--TTTT----CCTTTTTTACTTCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050830 24 - 80997621 TTTGGC--TTTT----CCTTTTTTACTTCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107463 24 + 10377808 TTTGGC--TTTT----CCTTTTTTACTTCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992737 24 - 8458610 TTTGGC--TTTT----CCTTTTTTACTTCT i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2177085 24 + 4244037 TTTGGC--TTTT----CCTTTTTTACTTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200079 24 + 4569836 TTTGGC--TTTT----CCTTTTTTACTTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149617 24 - 159171411 TCTGCC--TTTT----TCTTTTTTACTTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870683 26 + 3513951 TTTGGCTTTTTT----TTTTTTTTACTTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6253 24 - 4077172 TTTGGC--TTTT----TCTTTTTTACTTCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 45 24 - 94492 TTTGAC--TTTT----TCTTTTTTACTTCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861997 22 + 28711273 --------TTTTGAGGTGTTTTTGACATTT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22147369 24 - 122082543 TCCTGG--GCAT----CATGTTTAACCTCA i mm10.chr11 C 0 C 0 e canFam3.chr9 21481244 3101 + 61074082 T e dasNov3.JH570468 523978 66269 - 852752 I e chlSab2.chr16 64962642 5407 + 75148670 I a score=155487.000000 s hg38.chr17_JH159148v1_alt 36987 16 + 88070 GTGTGAATAAAAATTA s panTro5.chr17 16348039 16 + 83181570 GTGTGAATAAAAATTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252580 16 + 83442489 GTGTGAATAAAAATTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099929 16 + 4267968 GTGTGAATAAAAATTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084706 16 - 2193130 GTGTGAATAAAAATTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138027 16 - 77216781 GTGCGAATAAAAATTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050854 16 - 80997621 GTGCGAATAAAAATTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107487 16 + 10377808 GTGCGAATAAAAATTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992761 16 - 8458610 GTGTGAATAAAAATTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64968049 16 + 75148670 ATGTGAATAAAAAGTA i chlSab2.chr16 I 5407 C 0 s manLeu1.NW_012106252v1 2177109 16 + 4244037 GTGCGAATAAAAATTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200103 16 + 4569836 GTGTGAATAAAAATTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149641 16 - 159171411 GTGTGAACTAAAATGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870709 16 + 3513951 GTGTGAATTAAAATGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6277 16 - 4077172 GTGTGAATTAAAATGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 69 16 - 94492 GTGTGAATTAAAATGA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22862019 13 + 28711273 ACGTAAAAGAAAA--- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22147393 16 - 122082543 ATGCCAATCAAAATCA i mm10.chr11 C 0 T 13865 e canFam3.chr9 21481244 3101 + 61074082 T e dasNov3.JH570468 523978 66269 - 852752 I a score=202388.000000 s hg38.chr17_JH159148v1_alt 37003 29 + 88070 CAAAATTTATTTCTCTATTTCTTTCGCAT s panTro5.chr17 16348055 29 + 83181570 CAATATTTATTTCTCTATTTCTTTCACAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252596 29 + 83442489 CAATATTTATTTCTCTATTTCTTTCACAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099945 29 + 4267968 CAATATTTATTTCTCTATTTCTTTCGCAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084722 29 - 2193130 TAATATTTGTTTCTCTATTTCTTTTGCAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138043 27 - 77216781 TAATATATGTT--TCTGTTTCTTTTGCAT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050870 29 - 80997621 TAATATATGTTTCTCTGTTTCTTTTGCAT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107503 29 + 10377808 TAATATATGTTTCTCTGTTTCTTTTGCAT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992777 29 - 8458610 TAATATATGTTTCTCTGTTTCTTTTGCAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64968065 29 + 75148670 TAGTATTTGCTTCTCTATTTGTTTGTCAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177125 29 + 4244037 TAATATATGTTTCTCTGTTTCTTTTGCAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200119 29 + 4569836 TAATATATGTTTCTCTATTTCTTTTGCAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149657 29 - 159171411 TAATATTTTCTTCTCTATTTTTTTTGCAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870725 17 + 3513951 GAATATTTCC------------TTTGCAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6293 29 - 4077172 GAATATTTTCTTCTCAATTTCTTTTGCAT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 85 29 - 94492 GAATATTTCCTTCTCTATTTCTTTTGCAT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22862032 28 + 28711273 -AAAATTCAACTGGCCACTGTCTTTACAT i otoGar3.GL873537 C 0 I 5348 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21481244 3101 + 61074082 T e dasNov3.JH570468 523978 66269 - 852752 I a score=87187.000000 s hg38.chr17_JH159148v1_alt 37032 10 + 88070 AATCGCAAGT s panTro5.chr17 16348084 10 + 83181570 AATCGCAAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252625 10 + 83442489 AATCGCAAGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099974 10 + 4267968 AATCGCAAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084751 10 - 2193130 AATCTCAAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138070 10 - 77216781 AATCACAAGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28050899 10 - 80997621 AATCACAAGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107532 10 + 10377808 AATCACAAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992806 10 - 8458610 AATCACAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64968094 10 + 75148670 AATCAAAAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177154 10 + 4244037 AATCACAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200148 10 + 4569836 AATCACAAGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149686 10 - 159171411 AGTCAAAAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870742 10 + 3513951 AATCAAAAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6322 10 - 4077172 AATCAAAAGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 114 10 - 94492 AATCAAAAGT i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21481244 3101 + 61074082 T e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=163515.000000 s hg38.chr17_JH159148v1_alt 37042 16 + 88070 AATAATTACCGCCTAG s panTro5.chr17 16348094 16 + 83181570 AATAATTATCGCCTAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252635 16 + 83442489 AATAATTATCGCCTAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4099984 16 + 4267968 AATAATTATCGCCTAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084761 16 - 2193130 AATAATTATTGCCTAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138080 16 - 77216781 AATAATTATCACCTAG i rheMac8.chr16 C 0 I 321 s macFas5.chr16 28050909 16 - 80997621 AATAATTATCACCTAG i macFas5.chr16 C 0 I 321 s macNem1.NW_012014910v1 2107542 16 + 10377808 AATAATTATCACCTAG i macNem1.NW_012014910v1 C 0 I 308 s cerAty1.NW_012006043v1 1992816 16 - 8458610 AATAATTATCACCTAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64968104 16 + 75148670 AATCATTATCacctag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2177164 16 + 4244037 AATAATTATCACCTAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200158 16 + 4569836 AATAattatcgcctag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149696 16 - 159171411 AATAATTATTGCCTAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870752 16 + 3513951 AATAATTATTGCCTAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6332 16 - 4077172 AATAGTTATTGCCCTg i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 124 16 - 94492 AATAATTATTGCCTAG i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39587344 16 - 61074082 AAAAACTGTCACCTAG i canFam3.chr9 T 3025 C 0 e mm10.chr11 22147409 13865 - 122082543 T e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=459548.000000 s hg38.chr17_JH159148v1_alt 37058 47 + 88070 TCATTTTGCACTCTTCATGTCAGCAGATTAGAAGGCAGAGAACAGAG s panTro5.chr17 16348110 47 + 83181570 TCATTTTGCACTCTTCATGTCAGCAGATTAGAAGGCAGAGAACAGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252651 47 + 83442489 TCATTTTGCACTCTTCATGTCAGCAGATTAGAAGGCAGAGAACAGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100000 47 + 4267968 TCATTTTGCATTCTTTATGTCAGCAGATTAGAAGGCAGAGAACAGAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084777 47 - 2193130 TCATTTTGCACTCTTCATGTCAGCAGATTAGAAGGCAGAGAACAGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138417 47 - 77216781 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG i rheMac8.chr16 I 321 C 0 s macFas5.chr16 28051246 47 - 80997621 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG i macFas5.chr16 I 321 C 0 s macNem1.NW_012014910v1 2107866 47 + 10377808 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG i macNem1.NW_012014910v1 I 308 C 0 s cerAty1.NW_012006043v1 1992832 47 - 8458610 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64968120 47 + 75148670 tcattttggactcttcctgtcagcagagcagcagacagagaaaggag i chlSab2.chr16 C 0 T 5378 s manLeu1.NW_012106252v1 2177180 47 + 4244037 TCATTTTGCACTCTTTATGTCAGCTAAGCAGAAGGCAGAGGACACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200174 47 + 4569836 tcattttgcactctttatgtcagctgagcagaaggcagaggacacag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149712 47 - 159171411 TCATTTTACACTCTTCATGTCAGCAGATCAGAAGGCAAAGAACAGAG i calJac3.chr5 C 0 I 7 s saiBol1.JH378271 1870768 47 + 3513951 TCATTTTACACTCTTCATGTCAGCAGATCAGAAAGGAAAGAACAGAG i saiBol1.JH378271 C 0 I 7 s cebCap1.NW_016107543v1 6348 47 - 4077172 tcattttacactcttcatgtcagcagagcagaaggcaaagaagagag i cebCap1.NW_016107543v1 C 0 I 7 s aotNan1.NW_018505111v1 140 47 - 94492 TCATTTTACACTCTTCATGTCAGCAGATCGGAGGGCAAAGAACAGAG i aotNan1.NW_018505111v1 C 0 I 7 s canFam3.chr9 39587360 47 - 61074082 TCATTTTGTACTCCTCATGTTAGTAGACGAGCATGTAGAGAAAAGGG i canFam3.chr9 C 0 I 7 e mm10.chr11 22147409 13865 - 122082543 T e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=711592.000000 s hg38.chr17_JH159148v1_alt 37105 72 + 88070 TTGGTGAGGGGTAATTATCCTGAAGGCGTAGAATGT--AGGAgaatgtatctgtagctcaggagattt-actgaa s panTro5.chr17 16348157 72 + 83181570 TTGGTGAGGGGTAATTATCCTGAAGGCGTAGAATGT--AGGACAATGTATCTGTAGCTCAGGAGATTT-ACTGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252698 72 + 83442489 TTGGTGAGGGGTAATTATCCTGAAGGCGTAGAATGT--AGGACaatgtatctgtagctcaggagattt-actgaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100047 72 + 4267968 TTGGTGAGGGGTAATTATCCTGAAGGCGTAGAATGT--AGGAgaatgtatctgtagctcaggagattt-actgaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084824 72 - 2193130 TTGGTGAGGGGTAATTATCCTGAAGGCATAGAATGT--AGGAgaatgtatctgtagctcaggagattt-actgaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138464 72 - 77216781 TTGGTGAGGGGTAATTATTCTGAAGGCATAGAATGT--Agaagaatgtatctgtagctcgggagattt-actgaa i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28051293 72 - 80997621 TTGGTGAGGGGTAATTATTCTGAAGGCATAGAATGT--AGAAGAATGTATCTGTAGCTCGGGAGATTT-ACTGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107913 72 + 10377808 TTGGTGAGGGGTAATTATTCTGAAGGCATAGAATGT--Agaagaatgtatctgtagctcgggagattt-actgaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992879 72 - 8458610 TTGGTGAGGGGTAATTATTCTGAAGGCATAGAATGT--AGGAgaatgtatccgtagctcgggagattt-actgaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962789 72 + 75148670 TTGATGACGGGTAATTATCCTCAAGCCATATAGTGT--AGGAGAATGTATCTATACCTCAGAAGATTT-ACTTAG i chlSab2.chr16 T 5378 C 0 s manLeu1.NW_012106252v1 2177227 72 + 4244037 TTGGTGAGGGGTAATTATTCTGAAAGCATAGAATGT--AGGAgaatgtatccgtagctcgggagattt-actgaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200221 72 + 4569836 ttggtgaggggtaattattctgaaggcatagaatgt--aggagaatgtatctgtagctcaggagattt-actgaa i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149766 71 - 159171411 TTGGTGAGGAGTAATTATCCTGAAGTCGGAGAATGT--AGGAGAATCTATCTGTAGCTCA-GAGATTT-ACTGAA i calJac3.chr5 I 7 C 0 s saiBol1.JH378271 1870822 72 + 3513951 ATGGTGAGGTGTAATTATCCTGAAGTCAGAGAATAT--AGGTGAATCTATCTGTAGCTCAGGGGATTT-ACTGAA i saiBol1.JH378271 I 7 C 0 s cebCap1.NW_016107543v1 6402 72 - 4077172 ttggttaggagtaattatcctgaAGTCAAAGAACTT--AGGGGAATCTATCTGTAGCTCGGGAGATTT-ACTGAA i cebCap1.NW_016107543v1 I 7 C 0 s aotNan1.NW_018505111v1 194 72 - 94492 TTGATGAGGAGCTATTATCCTGAAGTCGGAGAATGT--AGGGGATTCTCTCTGTAGCTCAGGAGATTT-ACTGAA i aotNan1.NW_018505111v1 I 7 C 0 s canFam3.chr9 39587414 75 - 61074082 TCGGTGATGGATAATTATCATAAAAAGGTAGACTGCAGAGAGAAAGGTATCTGGAACTCAGGAGATTTCACTGGA i canFam3.chr9 I 7 I 1462 e mm10.chr11 22147409 13865 - 122082543 T e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=1969197.000000 s hg38.chr17_JH159148v1_alt 37177 218 + 88070 tatgttaatttactagcactgccatgataaaccactacaaaccaagtggctgaaatttattttctcacagttctgaaggctagtagtctgaatttaaggtgttgacaaggttgtttttacctgaggactgttaggaaagcatctcttccaggtgtctctccttgacttgtaaatgcctgtcttctccatatgtctcttacatgatcttccttctagat s panTro5.chr17 16348229 218 + 83181570 tatgttaatttactagcactgccatgataaaccactgcaaaccaagtggctgaaatttattttctcacagttctgaaggctagtagtctgaatttaaggtgttggcaaggttgtttttacctgaggactgttaggaaagcatctattccaggtgtctctccttgaattgtaaatgtctgtcttctccatgtgtctcttacatgatcttccttctagat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252770 218 + 83442489 tatgttaatttactagcactgccatgataaaccactgcaaaccaagtggctgaaatttattttctcacagttctgaaggctagtagtctgaatttaaggtgttgacaaggttgtttttacctgaggactgttaggaaagcatctattccaggtgtctctccttgacttgtaaatgtctgtcttctccatgtgtctcttacatgatcttccttctagat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100119 218 + 4267968 tatgttaatttactagcactgccatgataaaccactacaaagcaagtggctgaaatttattttctcacagttctgaaggctagtagtctgaatttaaggtgttgacaaggttgtttttacctgaggactgttaggaaagcatctattccaggtgtctctccttgacttgtaaatgtctgtcttctccatgtgtctcttacatgatcttccttctagat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2084896 218 - 2193130 tatgttaatttactagcactgccatgataaaacactacaaaccaagtggctgaaatttattttctcacagttctgaaagctagtagtctgaatttaaggtgttgacaaggttgtttttacctgaggactgttaggaaagcatctattccaggtatctctgcttgacttgtaaatgtctgtcttctctatgtgtctgttacatgatcttccttccaaat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138536 218 - 77216781 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaatttaaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttctccacctgtctcttacatgatcttccttctagat i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28051365 218 - 80997621 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaatttaaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttctccacctgtctcttacatgatcttccttctagat i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2107985 218 + 10377808 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaatttaaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttctccacctgtctcttacatgatcttccttctagat i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1992951 218 - 8458610 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaatttaaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttctccacctgtctcttacatgatcttccttgtagat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962861 217 + 75148670 tatattgatttactaacactgccatgatgaattactgcaaaccaagt-gcttaaatttattttttcacagtcccaaaggctattagtccgaaattaaggtgttggtaatgttgttttgatctgaaggctgcgagggaagtatctgttcccagtctttctccttaacttgcagatgtctatcatttccatgtgtgtttcatataatttttctactatat i chlSab2.chr16 C 0 I 131 s manLeu1.NW_012106252v1 2177299 218 + 4244037 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaatttaaggtgttgacaaggttgtttttacctgaggattgttagggaagtatctgttccaggtgtctgtccttgacttgtagatgtctgtcttctccacctgtctcttacatgatcttccttctagat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200293 218 + 4569836 tatgttaatttactagcactgccatgataatctactacaaaccaagtggcttaaatttattttcccacagttctgaagagtagcagcctgaatttaaggtgttgacaaggttgtttttacctgaggattgttaggaaagtatctgttccaggtgtctctccttgacttgtagatatctgtcttctccacgtgtctcttacatgatcttccttctagat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46149837 214 - 159171411 tatatgaatttac-agcactgccatgataaactactacaaaccaagtggcttaaatttattttctcatagttctgaaggccagcagtctgaatttcaggtgtggacaaggttgtttttgcctgaagagtgtaaggaatgtatctgctcctggtct-cctccttgatttgtagatgtgtgtcttctccatgagtctc--atgttagcttccttctagaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1870894 218 + 3513951 tatattaatttactagcactgccatgataaactactacaaaccaaatggcttaaactgattttctcatagttctgaaggctagcagtctcaattccaggtgtggacaaggctgtttttgcctgaagactgtaaggaaagtatctgttcctggtctccctccttgacttgtagatgtgtgtcttttccctgtgtctcttacgttagcttccttctagaa i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6474 218 - 4077172 tatattaatttactagcactgccatgataaagtactacaaaccaagtggcttaaatttattttctcatagtgctgtaggctagcagtctgaatttcaggtgtggacaaggttgtttttgcctgaagactgtaaggaacgtatctgttcctggtctccctccttgacttgtagatgtgtgtcttctccatgtgtctcttatgttagcttccttctagaa i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 266 212 - 94492 tatgttaatttactagcactgccatgataaactactacaaaccaagtggcttaaatgtattctctcatagttctgaaggccagcagtctggatttcaggtgtggacaaggttgtttttgcctgaagactgtaaggaaagtatccgtttcaggtgt-cctccttgacttgtagatgtgtgtcttctccatgtgtctc-----ttagcttccttcttgag i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=1111630.000000 s hg38.chr17_JH159148v1_alt 37395 136 + 88070 gcacatggcgtctgaacttccccattctatacaggcatcagtcctattgaatcaggggcctaacttgttccaatatgacctgatcttaactaattatgttttcaatgacctcatttcaatatgaattttgggggac s panTro5.chr17 16348447 136 + 83181570 gcacatggcgtctgaacttccccattctatacaggcatcagtcctattgaatcagaggcctaacttgtttcaatatgacctgatcttaactaattatgttttcaatgacctcatttcaatatgaattttgggggac i panTro5.chr17 C 0 C 0 s panPan2.chr17 16252988 136 + 83442489 gcacatggcgtctgaacttccccattctatacaggcatcagtcctattgaatcagaggcctaacttgtttcaatatgacctgatcttaactaattatgttttcaatgacctcatttcaatatgaattttgggggac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100337 136 + 4267968 gcacgtggcgtctgatcttccccattctatacaggcatcagtcctattgaatcagaggcctaacttgttccaatatgacctgatcttaactaattatgttttcaatgacctcatttcaatatgaattttgggggac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085114 136 - 2193130 gcacatggcgtctgaacagccccattctatacaggcatcagtcctattgaatcagaggtctatcttgttccgatatgacctgatcttaactaattacattttcaatgaccttatttgaatatgaattttgggggac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138754 135 - 77216781 gcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattaca-tttcagtgaccttatttgaatatgaattttgggggag i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28051583 135 - 80997621 gcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattaca-tttcagtgaccttatttgaatatgaattttgggggag i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108203 135 + 10377808 gcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattaca-tttcagtgaccttatttgaatatgaattttgggggag i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993169 135 - 8458610 gcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattaca-tttcagtgaccttatttgaatatgaattttgggggag i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2177517 135 + 4244037 gcacatggcctctgaacttccccattctatacaggcaccagtcctattgaatcagaggcctaacttattccaatatgacctgatcttaactaattaca-tttcagtgaccttatttgaatatgaattttgggggag i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200511 136 + 4569836 gcacacggcctctgaacttccccattctatacaggcatcagtcctattaaatcagaggcctaacttattccaatatgacctgatcttagctaattacattttcagtgaccttatttgaatatgaattttgggggag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46150051 135 - 159171411 gcacactgcctctgaacttccccattctacac-ggcatcagtcatattgaatcagacccctaactgattccaatatgacctgatctttactaattacgttttcaatgactctatttgagtatgaatttgtggagac i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1871112 136 + 3513951 gcacactgcctctgaacttccccattctatacaggcatcagtcacattgaatcagaggcctaactgattccagtatgacctgatcttaactaattacattttcagtgactctatttGAGTATGAATTTGTGGAGAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6692 136 - 4077172 gcacactgcctctgaacatcctcattctagacaagcatcagtcatattgaatcagaggcctaactgattccaatatgatctgatcttaactaattacattttcaatgactctatttgagtatgaatttgtggagac i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 478 136 - 94492 gcacactgcctctggacttccccattctatacaggtatcagtcatattgaatcagaggcctaactgattccagtatgtcctgatcttaactaattacattttcaatgactctatttGAGTATGAATTTGTGGAGAC i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e chlSab2.chr16 64963078 131 + 75148670 I a score=1237253.000000 s hg38.chr17_JH159148v1_alt 37531 140 + 88070 tc-attcaacccataacactggagaatctcatactgtgtccatgcccagagataaccacaagtgagtgaaaacagcaatcacagtggacagtggtacagtaactagtggctcagaccctttgggcaggaacatctgggtta s panTro5.chr17 16348583 140 + 83181570 tc-attcaacccataacaCTGGAGAATCTCATACTGTGTCCATGCCCAGTGATAACCACAAGTGAGTGAAAACAGCAATCACAGTGGACAATGGTACAGTAAGTAGTGGCTCAGACCCTTTGGGCAGGAACATCTGGGTTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253124 140 + 83442489 tc-attcaacccataacactggagaatctcatactgtgtccatgcccagtgataaccacaagtgagtgaaaacagcaatcacagtggacaatggtacagtaagtagtggctcagaccctttgggcaggaacatctgggtta i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100473 140 + 4267968 tc-attcaacccataacactggagaatctcatactgtgtccatgcccagtgataaccacaagtgagtgaaaacagcaatcacagtggacaacggtacagtaactagtggctcagaccctttgggcaggaacatctgggtta i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085250 140 - 2193130 ac-attcaacccataacactggagaatctcatagcgtgtccatgctcagtgataaccacaaatgagtgaaaccagcaatcacagcggacaatggtacagtaactagcggctcagaccctttgggcaggaacatctgggtta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30138889 140 - 77216781 ac-attcaacccatagtactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacagtggacaatggtacagtaactagtggctcagaccctttgggcaggaacgtctgggtta i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28051718 140 - 80997621 ac-attcaacccatagtactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacagtggacaatggtacagtaactagtggctcagaccctttgggcaggaacgtctgggtta i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108338 140 + 10377808 ac-attcaacccatagtactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacagtggacaatggtacagtaactagtggctcagaccctttgggcaggaacgtctgggtta i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993304 140 - 8458610 ac-attcaacccataacactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacagtggataatggtacagtaactagcggctcagaccctttgggcaggaacgtctgggtta i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963209 140 + 75148670 TG-AATTAACCCATAACACTGCAGAatctcatagtgtgtccatgcccagtgataaccacagatgagtaagaacagcaatcacaggggacagtggtatagtaactagaggctcagaccctttaggaaggaagttctgagcta i chlSab2.chr16 I 131 I 59 s manLeu1.NW_012106252v1 2177652 140 + 4244037 ac-attcaacccataacactggagaatctcgtggtgtgtccatgctcagtgataaccacacaggagtgaaaacagcaatcacagtggataatggtacagtaactagtggctcagaccctttgggcaggaacgtctgggtta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200647 140 + 4569836 ac-attcaacccataacactggagaatctcgtggtgtgtccatgctcagtgataaccacacatgagtgaaaatggcaatcacagcggacaatggtacagtaactagcggctcagaccctttgggcaggaacgtctgggtta i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46150186 141 - 159171411 acaagtcagcccataacaCTGAAGAATCTCATAGTGTATCCGTGCCTGCTGATAATCACCGATGAGTGAAAAGAGCAATCACAGCAGAGAATGATACAGTCACTAGCAGCTCAGACCTTTCAGAGAGGAAGCTCTGGTTTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1871248 140 + 3513951 AC-AGTCAACCCATAACACTGAAGAATCTCATAGTGTGTCCACGCCCGGTGATAACCACCAGTGACTGAAGACAGCAATCACAGTGGACAATGGCACAGTAACTAGCAGCTCAGCCCTTTCAGACAGGAAGGTCTGGTTTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 6828 140 - 4077172 acaagtcaacccataacaCTGATGAATCTCCTTGTGTGTCCATGCCCGGCGATAACCACCAATGAGTGAAAACAGCAACCACA-TGGACAATGGTACAGTACCAAGCAGCTCAGACATTTCAGGAAGGAAGTTCTGGTTTA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 614 141 - 94492 ACAAGTCAACCCCTAAGACTGAAGACTCTCATAGTGTGTCCATGCCCGGTGATAACCACCCACGAGTGAAAACGGCAATCACGGTGGACAATGGTACAGTAACTAGCAGCTCAGACCTTTCAGACAGGTAGGTCTGGTTTA i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=464829.000000 s hg38.chr17_JH159148v1_alt 37671 59 + 88070 ctccttccggaaattatctagagtagtaaaagttctggaaagtggtgaaggaactatag s panTro5.chr17 16348723 59 + 83181570 CTCCTTCCGGAAATTATCTAGAGTAGCAAAAGTTCTGGAAAGTGGTGAAGGAACTATAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253264 59 + 83442489 ctccttccggaaattatctagagtagcaaaatttctggaaagtggtgaaggaactatag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100613 59 + 4267968 ctccttccggaaattatctagagtagcaaaagttctggaaagtggtgaaggaactatag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085390 59 - 2193130 ctccttctggaaattatctagagcagcaaaagtgctggacagtggtgaaggaagtatag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30139029 59 - 77216781 ctccttcaggaaattatctagagcaacaaaagtgctggacagtggtgaaggaaatatag i rheMac8.chr16 C 0 I 1 s macFas5.chr16 28051858 59 - 80997621 ctccttcaggaaattatctagagcaacaaaagtgctggacagtggtgaaggaaatatag i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2108478 59 + 10377808 ctccttcaggaaattatctagagcaacaaaagtgctggacagtggtgaaggaaatatag i macNem1.NW_012014910v1 C 0 I 1 s cerAty1.NW_012006043v1 1993444 59 - 8458610 ctccttcaggaaattatctagagcaacaaaagtgctgggcagtggtgaaggaaatatag i cerAty1.NW_012006043v1 C 0 I 1 s manLeu1.NW_012106252v1 2177792 59 + 4244037 ctccttcaggaaattatctagagcaacaaaagtgctggacagtggtgaaggaaatatag i manLeu1.NW_012106252v1 C 0 I 1 s colAng1.NW_012122154v1 2200787 59 + 4569836 ctccttcaggaaattatctagagcgacaaaagtgctggacagtggtgagggaaatatag i colAng1.NW_012122154v1 C 0 I 1 s calJac3.chr5 46150327 59 - 159171411 CTCCTTCAGGAAAGTATGTAGAGCAACAAAAGTGCTGGACAGTGGTGAATGAAGTATCG i calJac3.chr5 C 0 I 1 s saiBol1.JH378271 1871388 59 + 3513951 CTCCTTCAGGAAAATACATAGGGCAGTGAAACTGCTGGACAGTGGTGACAGAAGTATAG i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 6968 59 - 4077172 CTCCTTCAGGAAAGTACATAGTGCAACAAAGGTGCTGGACAGTGGTGAAAGAAGTATAG i cebCap1.NW_016107543v1 C 0 I 1 s aotNan1.NW_018505111v1 755 58 - 94492 CTCGTTCAGGAAAGTATCTAGAGCAACAAAA-TGCTGGACAGTGATGAAGGAAGTATAG i aotNan1.NW_018505111v1 C 0 I 1 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e chlSab2.chr16 64963349 59 + 75148670 I a score=137183.000000 s hg38.chr17_JH159148v1_alt 37730 17 + 88070 acttttgataattaatg s panTro5.chr17 16348782 17 + 83181570 ACTTTTGATAATTAATG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253323 17 + 83442489 acttttgataattaatg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100672 17 + 4267968 acttttgataattaatg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085449 17 - 2193130 acttttgataattaatg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30139089 17 - 77216781 aCTTTCGATAATTAATG i rheMac8.chr16 I 1 I 31425 s macFas5.chr16 28051918 17 - 80997621 actttcgataattaatg i macFas5.chr16 I 1 C 0 s macNem1.NW_012014910v1 2108538 17 + 10377808 actttcgataattaatg i macNem1.NW_012014910v1 I 1 C 0 s cerAty1.NW_012006043v1 1993504 17 - 8458610 acttttgataattaatg i cerAty1.NW_012006043v1 I 1 C 0 s chlSab2.chr16 64963408 17 + 75148670 actggtaataattaatg i chlSab2.chr16 I 59 C 0 s manLeu1.NW_012106252v1 2177852 17 + 4244037 acttttgataattaatg i manLeu1.NW_012106252v1 I 1 C 0 s colAng1.NW_012122154v1 2200847 17 + 4569836 acttttgataattaatg i colAng1.NW_012122154v1 I 1 C 0 s calJac3.chr5 46150387 17 - 159171411 ACTTGTGGTAATTTGTG i calJac3.chr5 I 1 C 0 s saiBol1.JH378271 1871448 17 + 3513951 ACTTGTGGTGGCTTGTG i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 7028 17 - 4077172 AGTTGTGGTAATTTGTG i cebCap1.NW_016107543v1 I 1 C 0 s aotNan1.NW_018505111v1 814 17 - 94492 ACTTGTGGTAATTTGTG i aotNan1.NW_018505111v1 I 1 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I a score=597971.000000 s hg38.chr17_JH159148v1_alt 37747 73 + 88070 gagattatggctgtcaggtgcaccctattatagcagcagtaactgttgcttgttccattggccttcattttAC s panTro5.chr17 16348799 73 + 83181570 GAGATTATGACTGTCAGGTGCACCCTATTATAGCAGCAGTAACTGTTACTTGTTTCATTGGCCTTCATTTTAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253340 73 + 83442489 gagattatgactgtcaggtgcaccctattatagcagcagtaactgttgcttgttccattggccttcattttAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100689 73 + 4267968 gagattatgactgtcaggtgcaccctattatagcagcagtaactgttgcttgttccactggccttcattttAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085466 73 - 2193130 gagattatgactgtcaggtgCATCCTATTATAGCAGCAGTAACTGTTGCTTGTTCCATTGGGCTTCATTTTAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28051935 73 - 80997621 gagattatgactgtcaggtgtaccttattatagcagcagtaactgttgcttgttccattggccttcattttAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108555 73 + 10377808 gagattatgactgtcaggtgtaccttattatagcagcagtaactgttgcttgttccattggccttcattttAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993521 73 - 8458610 gagattatgactgtcaggtgtaccttattatagcagcagtaactgttgcttgttccattggccttcattttAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963425 73 + 75148670 gagattgtgaatctcaAGTGCACTGTATTACAGCAGCAGTAAGTGTAACTTATTTCATTGGCCTTCATTTTAC i chlSab2.chr16 C 0 I 33 s manLeu1.NW_012106252v1 2177869 73 + 4244037 gagattatgactgtcaggtgtACCTTATTATAGCAGCAGTAACAGTTGCTTGTTCCATTGGCTTTCATTTTAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200864 73 + 4569836 gagattatgactgtcagatgtaccttattatagcaacagtaactgttgcttgttccattggccttcattttAC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46150404 73 - 159171411 GAGATGATGAGTCTCAGGTGCACCTTATTACAGTAGCAGCACCTGTTGCTTGTTTCATTGGCCTTCATTTTAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1871465 73 + 3513951 GAGATGATGAGTCTCGGGTGCACCTTACTGTAGTGGCAGTAACTGTTCCTTGTTCCATTGGCCTTCATTTTAT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7045 73 - 4077172 GAGATGATGAGTCTCAGGTGCACCTTATTATAGTAGCCGTAACTGTTCCTTGTTCCATTGGCCTTCATTTTAT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 831 73 - 94492 GAGATTTTGAGTCTCAGGTGCCCTTTATTATAGTAGCAGTAACTGTGGCTTGTTCCATTGGCCTTCATTTTAT i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=233224.000000 s hg38.chr17_JH159148v1_alt 37820 38 + 88070 ATATCTCTCCCCCTCctttcttt-----gcttcttaatttc--------------------t-c s panTro5.chr17 16348872 38 + 83181570 ATATCTCTCCCcctcctttcttt-----gcttcttaatttc--------------------t-c i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253413 38 + 83442489 ATATCTCTCCCCCTCCTTTCTTT-----GCTTCTTAATTTC--------------------t-c i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100762 38 + 4267968 ATATCTCTCCCcttcctttcttt-----gcttcttaatttc--------------------t-c i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085539 58 - 2193130 ATATGTCTCCCcctcctttcttt-----gcttcttagtttctcctccctcccttccttcctt-c i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052008 38 - 80997621 ATATCTCTCCCCCTCCTTTCTTT-----GCTTTTTAatttc--------------------t-c i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108628 38 + 10377808 ATATCTCTCCCCCTCCTTTCTTT-----GCTTTTTAATTTC--------------------t-c i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993594 38 - 8458610 ATATCTCTCCCCCTCctttcttt-----gctttttaatttc--------------------t-c i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2177942 38 + 4244037 ATATCTCTCCCCCTCctttcttt-----gctttttaatttc--------------------t-c i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200937 38 + 4569836 ATATCTCTCCccctcctttcttc-----gctttttaatttc--------------------t-c i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46150477 41 - 159171411 ATAT--CTCCCCCTCCTTTCTTTCCATTCCTTCTTAGTTTC--------------------T-c i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1871538 44 + 3513951 ATATCACTCCCCCTCCTTTCTTCTCTTAGCTTCTTAATTTC--------------------TAc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7118 44 - 4077172 ACATCTCTCCCCCTCCTTTCTTTTCTTAGGTTTTCAGttcc--------------------ttc i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 904 43 - 94492 Atctctctccctttcctctctttccttagcttcttagtttt--------------------t-c i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e chlSab2.chr16 64963498 33 + 75148670 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=205565.000000 s hg38.chr17_JH159148v1_alt 37858 34 + 88070 cttccttccttccttctttccttccttccttcct s panTro5.chr17 16348910 34 + 83181570 cttccttccttccttctttccttccttccttcct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253451 34 + 83442489 cttccttccttccttctttccttccttccttcct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100800 26 + 4267968 cttccttcc--------ttctttccttccttcct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085597 34 - 2193130 cttccttccttccttccttccttccttccttcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052046 34 - 80997621 cttccttccttccctccctccttccttccctccc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108666 34 + 10377808 cttccttccttccctccctccttccttccctccc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993632 34 - 8458610 cttccttccttccctccctccttccttccctccc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963531 34 + 75148670 ctttcttccttctttctttcttttcttttctcct i chlSab2.chr16 I 33 C 0 s manLeu1.NW_012106252v1 2177980 34 + 4244037 cttccttccctccctccctccttccttccctccc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2200975 34 + 4569836 cttccttccttccctccctccttccctctctcct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46150518 34 - 159171411 ctccctccctccctccctccctccctccctccct i calJac3.chr5 C 0 I 952 s saiBol1.JH378271 1871582 30 + 3513951 ctacctcccttcttcccttcttccctttct---- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7162 26 - 4077172 cttcctccctccctccctccctccct-------- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 947 34 - 94492 cctcatcccttctttccttccttcctttcttcca i aotNan1.NW_018505111v1 C 0 I 4 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=55837.000000 s hg38.chr17_JH159148v1_alt 37892 14 + 88070 ccctccctccctct s panTro5.chr17 16348944 14 + 83181570 tcctccctccctct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253485 14 + 83442489 tcctCCCTCCCTCT i panPan2.chr17 C 0 M 318 s gorGor5.CYUI01015385v1 4100826 14 + 4267968 ccctccctccctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085631 14 - 2193130 tccttcctccctcc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052080 14 - 80997621 tcccttctttcttt i macFas5.chr16 C 0 I 2 s macNem1.NW_012014910v1 2108700 14 + 10377808 tcccttctttcttt i macNem1.NW_012014910v1 C 0 I 2 s cerAty1.NW_012006043v1 1993666 13 - 8458610 t-ccttccttcctt i cerAty1.NW_012006043v1 C 0 I 2 s chlSab2.chr16 64963565 14 + 75148670 ttctttctttcttt i chlSab2.chr16 C 0 I 2 s manLeu1.NW_012106252v1 2178014 14 + 4244037 tccctccctccctc i manLeu1.NW_012106252v1 C 0 I 2 s colAng1.NW_012122154v1 2201009 14 + 4569836 ttctttctttcttt i colAng1.NW_012122154v1 C 0 I 2 s saiBol1.JH378271 1871612 14 + 3513951 cccttccttctctt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7188 14 - 4077172 cccttccttccttc i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 985 14 - 94492 tccatccttctctc i aotNan1.NW_018505111v1 I 4 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=12730.000000 s hg38.chr17_JH159148v1_alt 37906 6 + 88070 ctctct s panTro5.chr17 16348958 6 + 83181570 ctctct i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100840 6 + 4267968 ctctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085645 6 - 2193130 ctctct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052096 6 - 80997621 ttctct i macFas5.chr16 I 2 C 0 s macNem1.NW_012014910v1 2108716 6 + 10377808 ctttct i macNem1.NW_012014910v1 I 2 C 0 s cerAty1.NW_012006043v1 1993681 6 - 8458610 ctccct i cerAty1.NW_012006043v1 I 2 C 0 s chlSab2.chr16 64963581 6 + 75148670 ttcttt i chlSab2.chr16 I 2 C 0 s manLeu1.NW_012106252v1 2178030 6 + 4244037 tccctc i manLeu1.NW_012106252v1 I 2 C 0 s colAng1.NW_012122154v1 2201025 6 + 4569836 ttcttt i colAng1.NW_012122154v1 I 2 C 0 s saiBol1.JH378271 1871626 1 + 3513951 c----- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7202 6 - 4077172 cttcct i cebCap1.NW_016107543v1 C 0 I 61 s aotNan1.NW_018505111v1 999 6 - 94492 ctgcct i aotNan1.NW_018505111v1 C 0 I 3 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=207.000000 s hg38.chr17_JH159148v1_alt 37912 6 + 88070 ttctc------------------------t s panTro5.chr17 16348964 6 + 83181570 ttctc------------------------t i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100846 6 + 4267968 ttctc------------------------t i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085651 6 - 2193130 ctctc------------------------t i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052102 30 - 80997621 ctctctctctctttctttctctttctttct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108722 1 + 10377808 -----------------------------t i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993687 19 - 8458610 ccctccctccctccctcc-----------t i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963587 6 + 75148670 ctttc------------------------t i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2178036 6 + 4244037 cctcc------------------------t i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2201031 6 + 4569836 ctttc------------------------t i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1871627 6 + 3513951 tttcc------------------------t i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018505111v1 1008 6 - 94492 ttctc------------------------t i aotNan1.NW_018505111v1 I 3 I 78 e mm10.chr11 22147409 13865 - 122082543 T e cebCap1.NW_016107543v1 7208 61 - 4077172 I e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=43292.000000 s hg38.chr17_JH159148v1_alt 37918 13 + 88070 ttctttctttctt s panTro5.chr17 16348970 5 + 83181570 ttctt-------- i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100852 13 + 4267968 ttctttctttttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085657 13 - 2193130 ttctttctttctc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052132 13 - 80997621 ttctttctttctt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108723 13 + 10377808 ttctttctttctt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993706 13 - 8458610 ttctttctttctt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963593 13 + 75148670 ttctttctttctt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2178042 13 + 4244037 ttctttctttctt i manLeu1.NW_012106252v1 C 0 I 21584 s colAng1.NW_012122154v1 2201037 13 + 4569836 ttctttctttctt i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1871633 13 + 3513951 ccctctcttcttc i saiBol1.JH378271 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 1014 78 - 94492 I e cebCap1.NW_016107543v1 7208 61 - 4077172 I e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=11987.000000 s hg38.chr17_JH159148v1_alt 37931 14 + 88070 tttc------------------------tttttctttc s panTro5.chr17 16348975 4 + 83181570 ----------------------------------tttc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100865 6 + 4267968 tt--------------------------------tttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085670 38 - 2193130 tctctccttccttccttaattccttccttctttcttcc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052145 14 - 80997621 ------------------------tctttctttctttc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108736 14 + 10377808 ------------------------tctttctttctttc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993719 14 - 8458610 ------------------------tctttctttctttc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963606 14 + 75148670 ------------------------tctttctttctttc i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2201050 14 + 4569836 ------------------------tctttctttctttc i colAng1.NW_012122154v1 C 0 I 81 s saiBol1.JH378271 1871646 14 + 3513951 ------------------------cttccctttcttcc i saiBol1.JH378271 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 1014 78 - 94492 I e cebCap1.NW_016107543v1 7208 61 - 4077172 I e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=35424.000000 s hg38.chr17_JH159148v1_alt 37945 27 + 88070 ----tttctttc--tcttt-----------------------cttctttttctctc s panTro5.chr17 16348979 27 + 83181570 ----tttctttc--tcttt-----------------------cttctttttctctc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100871 27 + 4267968 ----tttctttc--tcttt-----------------------cttctttttctctc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085708 50 - 2193130 ----tttctttc--tttttttcttccttccttccttcctttccctttctttctttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052159 24 - 80997621 ----tttctttctttcttt-----------------------ctttcttt-----c i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108750 24 + 10377808 ----tttctttctttcttt-----------------------ctttcttt-----c i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993733 29 - 8458610 ----tttctttctttcttt-----------------------ctttctttccctcc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963620 29 + 75148670 ----tttctttctttcttt-----------------------tctttttttctctc i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1871660 28 + 3513951 ctcctttcttccttccctt-----------------------cctcctttc----- i saiBol1.JH378271 C 0 I 3 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 1014 78 - 94492 I e cebCap1.NW_016107543v1 7208 61 - 4077172 I e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e dasNov3.JH570468 523978 66269 - 852752 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e colAng1.NW_012122154v1 2201064 81 + 4569836 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=2978.000000 s hg38.chr17_JH159148v1_alt 37972 2 + 88070 tc s panTro5.chr17 16349006 2 + 83181570 tc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100898 2 + 4267968 tc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085758 2 - 2193130 tt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052183 2 - 80997621 tt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108774 2 + 10377808 tt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993762 2 - 8458610 tt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963649 2 + 75148670 ta i chlSab2.chr16 C 0 C 0 s dasNov3.JH570468 590247 2 - 852752 TC i dasNov3.JH570468 I 66269 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 1014 78 - 94492 I e cebCap1.NW_016107543v1 7208 61 - 4077172 I e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e saiBol1.JH378271 1871688 3 + 3513951 I e calJac3.chr5 46150552 952 - 159171411 I e colAng1.NW_012122154v1 2201064 81 + 4569836 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=11533.000000 s hg38.chr17_JH159148v1_alt 37974 18 + 88070 tccttcct-----------------------------------------gccttccttc s panTro5.chr17 16349008 18 + 83181570 tccttcct-----------------------------------------gccttccttc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100900 18 + 4267968 tccttcct-----------------------------------------gccttccttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085760 18 - 2193130 tctttctt-----------------------------------------tctttctttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052185 59 - 80997621 tctttctttctctttctttcttttttctttctttctttctttctttctttctttctttc i macFas5.chr16 C 0 I 24 s macNem1.NW_012014910v1 2108776 8 + 10377808 tctttctt--------------------------------------------------- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993764 8 - 8458610 tctttctt--------------------------------------------------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963651 18 + 75148670 tctttctt-----------------------------------------tctttctttc i chlSab2.chr16 C 0 I 22 s saiBol1.JH378271 1871691 16 + 3513951 tactttct-----------------------------------------ttctttct-- i saiBol1.JH378271 I 3 C 0 s cebCap1.NW_016107543v1 7269 18 - 4077172 tcctttct-----------------------------------------tcctcccttc i cebCap1.NW_016107543v1 I 61 C 0 s dasNov3.JH570468 590249 17 - 852752 TCTTGCCT-----------------------------------------GCCTGCCTT- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 1014 78 - 94492 I e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e colAng1.NW_012122154v1 2201064 81 + 4569836 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=910.000000 s hg38.chr17_JH159148v1_alt 37992 1 + 88070 t s panTro5.chr17 16349026 1 + 83181570 t i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100918 1 + 4267968 t i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085778 1 - 2193130 t i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cebCap1.NW_016107543v1 7287 1 - 4077172 t i cebCap1.NW_016107543v1 C 0 I 3 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 1014 78 - 94492 I e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e dasNov3.JH570468 590266 0 - 852752 C e otoGar3.GL873537 22862060 5348 + 28711273 I e saiBol1.JH378271 1871707 0 + 3513951 C e calJac3.chr5 46150552 952 - 159171411 I e colAng1.NW_012122154v1 2201064 81 + 4569836 I e chlSab2.chr16 64963669 22 + 75148670 I e cerAty1.NW_012006043v1 1993772 0 - 8458610 C e macNem1.NW_012014910v1 2108784 0 + 10377808 C e macFas5.chr16 28052244 24 - 80997621 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=24733.000000 s hg38.chr17_JH159148v1_alt 37993 20 + 88070 ctc--------------tctctctttctttcttt s panTro5.chr17 16349027 10 + 83181570 c------------------------tctttcttt i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100919 10 + 4267968 c------------------------tctctcttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085779 34 - 2193130 ttctttctttctttctttctttctttctttcttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052268 20 - 80997621 -------------tctttctttcttt-tctcttt i macFas5.chr16 I 24 I 3 s macNem1.NW_012014910v1 2108784 20 + 10377808 -------------tctttctttcttt-tctcttt i macNem1.NW_012014910v1 C 0 I 3 s cerAty1.NW_012006043v1 1993772 21 - 8458610 -------------tctttctttctttctttcttt i cerAty1.NW_012006043v1 C 0 I 167 s chlSab2.chr16 64963691 21 + 75148670 -------------tctttctttctttctttcttt i chlSab2.chr16 I 22 I 14 s colAng1.NW_012122154v1 2201145 20 + 4569836 -------------tctttctttctttctttctt- i colAng1.NW_012122154v1 I 81 C 0 s saiBol1.JH378271 1871707 20 + 3513951 --------------ctttctttctttctttcttt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7291 20 - 4077172 --------------ccttcgtcctttcctccctc i cebCap1.NW_016107543v1 I 3 C 0 s aotNan1.NW_018505111v1 1092 16 - 94492 ------------------ctttctttcttttctt i aotNan1.NW_018505111v1 I 78 C 0 s dasNov3.JH570468 590266 17 - 852752 --------------TGTGcctgccttccttc--- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=120571.000000 s hg38.chr17_JH159148v1_alt 38013 26 + 88070 ctttcctcctt---cctttcttccttcca s panTro5.chr17 16349037 26 + 83181570 ctttcctcctt---cctttcttccttcca i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100929 26 + 4267968 ctttcctcctt---cctttcttccttcca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085813 26 - 2193130 ctcccctcctt---cctttcttccttcca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052291 26 - 80997621 ctttcctcctt---cctttcttccttcca i macFas5.chr16 I 3 C 0 s macNem1.NW_012014910v1 2108807 26 + 10377808 ctttcctcctt---cctttcttccttcca i macNem1.NW_012014910v1 I 3 C 0 s cerAty1.NW_012006043v1 1993960 26 - 8458610 ctttcctcctt---cctttcttccttcca i cerAty1.NW_012006043v1 I 167 C 0 s chlSab2.chr16 64963726 26 + 75148670 ccttccttttt---ctttctttctttctt i chlSab2.chr16 I 14 C 0 s colAng1.NW_012122154v1 2201165 26 + 4569836 ctttcctcctt---cctttcttccttcca i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1871727 26 + 3513951 ctttctttctt---tctttctttctttct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7311 28 - 4077172 ctttctttcttcc-tctttctttctttct i cebCap1.NW_016107543v1 C 0 I 1 s aotNan1.NW_018505111v1 1108 29 - 94492 ctttctttcctctatctttgtttccttct i aotNan1.NW_018505111v1 C 0 I 1 s dasNov3.JH570468 590283 26 - 852752 attccttctgt---ccttccttctcttcc i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e calJac3.chr5 46150552 952 - 159171411 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=49753.000000 s hg38.chr17_JH159148v1_alt 38039 8 + 88070 tccctcct s panTro5.chr17 16349063 8 + 83181570 tccctcct i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100955 8 + 4267968 tccctcct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085839 8 - 2193130 tccctcct i nomLeu3.chrUn_GL397460_1 C 0 I 24 s macFas5.chr16 28052317 8 - 80997621 tccctcct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108833 8 + 10377808 tccctcct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993986 8 - 8458610 tccctcct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963752 8 + 75148670 tctttcct i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2201191 8 + 4569836 tctctcct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46151504 8 - 159171411 ttccttcc i calJac3.chr5 I 952 C 0 s saiBol1.JH378271 1871753 8 + 3513951 ttctttct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7340 8 - 4077172 ttcctcct i cebCap1.NW_016107543v1 I 1 C 0 s aotNan1.NW_018505111v1 1138 8 - 94492 tcccgccc i aotNan1.NW_018505111v1 I 1 C 0 s dasNov3.JH570468 590309 8 - 852752 tctctcct i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16253499 318 + 83442489 M a score=240950.000000 s hg38.chr17_JH159148v1_alt 38047 36 + 88070 ttccttcttc--cttccctctctccttccc--tcctttct s panTro5.chr17 16349071 36 + 83181570 ttccttcttc--cttccctctctccttccc--tcctttct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253819 35 + 83442489 ttccttcttc--ctt-cctctctccttccc--tcctttct i panPan2.chr17 M 318 C 0 s gorGor5.CYUI01015385v1 4100963 35 + 4267968 ttccttcttc--cttccctct-tccttcct--tcctttct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085871 36 - 2193130 ttccttcttc--cttccctctctccttccc--tccttcct i nomLeu3.chrUn_GL397460_1 I 24 C 0 s macFas5.chr16 28052325 36 - 80997621 ttccttcttc--cttccttctctccttccc--tcctttct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108841 36 + 10377808 ttccttcttc--cttccttctctccttccc--tcctttct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1993994 36 - 8458610 ttccttcttc--cttccttctctccttccc--tcctttct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963760 38 + 75148670 tccttccttc--cttccttctttctttctctttcctttct i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2201199 36 + 4569836 ttccttcttc--cttccctctctccttccc--tcctttct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46151512 36 - 159171411 ttcctccctc--cctccctccctccccccc--tccctttg i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1871761 36 + 3513951 ttctttcttt--ctttctttccttctgtcc--ttccttca i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 7348 36 - 4077172 tccctccctc--ctatcctccctccttccc--tcctttta i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 1146 36 - 94492 tccctccttc--cctccatttctccctccc--tccctcct i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 590317 38 - 852752 tacctccttcctcttccctccctcctttct--ttctttct i dasNov3.JH570468 C 0 I 38825 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=1769820.000000 s hg38.chr17_JH159148v1_alt 38083 267 + 88070 tccttccccccttctttccttc---------------------cttcctttcttctc--------tctttctttcatttttcc-------------------------------------------------atctttcttcttcctctcattt--tctgtttttcctctttctcctcttcctttcctcctcctcttccttc-----------------ttCTAGAGTTTGTGGCTGCCCACCACACTTAAGAAGCAAA-------------------------------GATTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGATAGGATTTCCTTATCCCATTCCTA-TATCTTGGATCTTAGTATGCTCAGACCAATATGCATTTGCCCAAA s panTro5.chr17 16349107 267 + 83181570 tccttccccccttctttccttc---------------------cttcctttcttctc--------tctttctttcatttttcc-------------------------------------------------gtctttcttcttcctctcattt--tctgtctttcctctttctcctcttcctttcctcctcctcttccttc-----------------ttcTAGAGTTTGTGGCTGCCCACCACACTTAAGAAGCAAA-------------------------------GATTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGATAGGATTTCCTTATCCCATTCCTG-TATCTTGGATCTTAGTATGCTCAGACCAATATGCATTTGCCCAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16253854 267 + 83442489 tccttccccccttctttccttc---------------------cttcctttcttctc--------tctttctttcatttttcc-------------------------------------------------gtctttcttcttcctctcattt--tctgtctttcctctttctcctcttcctttcctcctcctcttccttc-----------------ttcTAGAGTTTGTGGCTGCCCACCACACTTAAGAAGCAAA-------------------------------GATTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGATAGGATTTCCTTATCCCATTCCTG-TATCTTGGATCTTAGTATGCTCAGACCAATATGCATTTGCCCAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4100998 267 + 4267968 tccttccccccttctttccttc---------------------cttcctttcttctc--------tctttctttcatttttcc-------------------------------------------------gtctttcttcttcctctcattt--tctgtttttcctctttctcctcttcctttcCTCCTCGTCCTCCTTC-----------------TTCTAGAGTTTGTGGCTGCCCACCACACTTAAGAAGCAAA-------------------------------GATTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGATAGGATTTCCTTATCCCATTCCTA-TATCTTGGATCTTAGTATGCTCAGACCAATATGCATTTGCCCAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085907 316 - 2193130 tccttccccccttctttccttc---------------------cttccccccttctt--------tccttccttcctttcttctctttctttctttctctttctttctttcttctttgtctttctttcatttttctttcttcttcctctcattt--tctgtttttcctctttctcctcttcctttcctcctcctcttccttA-----------------TTCTAGTGTTTGTGGCTGCCCATCACATTTAAGAAGCAAC-------------------------------GATTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGATAGGATTTCCTTATCCCATTCCTA-TATCTTGGatcttagtgtgctcagaccaatatgcatttgccagaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052361 269 - 80997621 tccttcccctcttctttccttc---------------------cctcctttcttctctc------tctttctttcatttttct-------------------------------------------------gtctttcttcttcCTCTCATTT--TCCGTTTGTCCTCTTTCTCCTCTTCCTTTCCTCCTCCTCTTCCTTC-----------------TTCTAGAGTTTGTGGCCGCCCACCACATTTAAGAAGCAAA-------------------------------GACTGAGTCTGTGTGGAGCAAATGGTAGGTTGTAGATAGGATTTCCTTATCCCATCCCTA-TATCTTGGATCTTAGTGTGCTCAGACTAATTTGCATTTGCCAGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2108877 269 + 10377808 tccttcccctcttctttccttc---------------------cctcctttcttctctc------tctttctttcatttttct-------------------------------------------------gtctttcttcttcctctcattt--tccgtttgtcctctttctcctcttcctttcctcctcctcttccttc-----------------ttcTAGAGTTTGTGGCCGCCCACCACATTTAAGAAGCAAA-------------------------------GACTGAGTCTGTGTGGAGCAAATGGTAGGTTGTAGATAGGATTTccttatcccatcccta-tatcttggatcttagtgtgctcagactaatttgcatttgccagaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1994030 269 - 8458610 tccttcccctcttctttccttc---------------------cctcctttcttctctc------tctttctttcatttttct-------------------------------------------------gtctttcttctttctctcattt--tccgtttgtcctctttctcctcttcctttcctcctcctcttccttc-----------------ttCTAGAGTTTGTGGCTGCCCACCACGTTTAAGAAGCAAA-------------------------------GACTGAGTCTGTGTGGAGCAAATGGTAGGTTGTAGATAGGATTTCCTTATCCCATCCTTA-TATCTTGGatcttagtgtgctcagactaatgtgcatttgccagaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963798 295 + 75148670 ttccttccctctttcttttttctttttttctttcttcttttattttccttccttccctctgttgttctgtttttctttctttc-------------------------------------------------atctttcctcctcctctcatct--tctgtcccttcccttcctccgcttcctctcttcctcttcttccttc-----------------ttCTAGAGCTTGTGGCTGTCCATCGTATTTAAGTAGCAAT-------------------------------ATTTGACT-TGAGTGGAGCTAATTGTAGGTCATAGACAAGTTTTCATGACTGCACCCATA-TATCTTGGATATTAGTGTGCTTGGATTAATTTCCATCTGTCAGAG i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2201235 270 + 4569836 tccttgccctcttctttccttc---------------------cctcctttcttctctc------tctttctttcatttttct-------------------------------------------------gtctttcttcttcctctcattt--tctgtttgtcctctttctcctcttcctttcctcttcctcttccttc-----------------ttcTAGAGTTTGTGGTCGCCCACCACATTTAAGAAGCAAA-------------------------------GACTGAGTCTGTGTGGAGCAAATGGTAGGTTGTAGATAGGATTTCCTTATCCCATCCCTATTATCTTGGATCTTAGTGTGCTCAGACTAATATGCATTTGCCAGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46151548 260 - 159171411 accctccttccctccttctttc---------------------cttccttcct---c--------cctccctcccttctttct-------------------------------------------------gtctttcttcttcctctcatct--tctgttcttcctctttctcctcttcctctcc---tcgtcttccttc-----------------ttctAGAGTTTGTGGTTGCTTACCGCATTTAAGAAGCAAA-------------------------------GGTTGGGTCTGTGTGGAGCAAATGGTAGAGTGTAGCTAAGATTTCATTATTCCAC-CCTG-TATCTTGGatcttagtgtactcagaccaatatacattcgccagaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1871798 263 + 3513951 tccttctttcctttcttccttc---------------------cttccttcct------------tctctctttcAtcttttt-------------------------------------------------gtctttcttctccttctcatct--tctgttcttcctctttctcctcttcctctcctcttcatcttccctc-----------------ttctAGAGTTTGTGGTTGTTTACCACATTTAAGAAGCAAA-------------------------------GATTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGCTTAGATTTCATCATCCCACACCTT-TGTCTTGGAACTTAGTGTTCTCATACCAATATGCATTTGCCAGAA i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 7384 267 - 4077172 tccttttttccttatttcctcc---------------------ctcccttccttcat--------tctctctttcatctttct-------------------------------------------------gtctgtcttcttcctctcatct--tctgttcttcctctttctcctcttcctctcctcctcgtcttccttc-----------------ttcTAGAGTTTGTGGTTGCTTACCACATTTAAGAAGCAAA-------------------------------GATTGGGTCTGTGAGGAGCAAATGGTAGGTTGTAACTAAGATTTCATCATCCCACCCCTG-TATCTTGGATCTCAGTGTACTCAGATCAATATGCGTTTGCCAGAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 1182 259 - 94492 tccgtcctaccttccttccttc---------------------cctcccttcc---a--------tctctctttcatctttct-------------------------------------------------g----tcttcctcctctcatct--cctgttcttcctctttctcctcttcctctcctcCTTGTCTTCCTTC-----------------TTCTAGGCTTTGTGGTTGCTTACCACATTTAAGAAGCAAA-------------------------------GTTTGGGTCTGTGTGGAGCAAATGGTAGATTGTAGCTAAGATTTCATTATCCCAC-CCTG-TATCTTGGATCTTAGTGTACTCAGACCAACATGCATTTGCCAGAA i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 629180 310 - 852752 tcctaccttccttccttccttc-----------------------ttctttctgatc--------tatctttttttcccactc-------------------------------------------------accttccctctgtccccaattctgtctatttcttctactcctccccttctcctcctcttcatcttcttccACTTTTTACCCCATATATTTAAAAAATTGTGTATAT-----GAATTTGAATAGGAAAAACAGATTGGAGTAAGCTTAACATGACGTGTGATTCAACCTCTGCAGAGGAAAGGTTGTATTCTACATTAAGTTTTAAACACCCACCCATG-CATCTTGTATCCTGGTGTAGTCAGATTGATTTCCATCTACCAATA i dasNov3.JH570468 I 38825 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2178055 21584 + 4244037 I e otoGar3.GL873537 22862060 5348 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=2153258.000000 s hg38.chr17_JH159148v1_alt 38350 277 + 88070 TCTGCATCTGTGTGCCTATGGGCTCTTGTATTGTTACTGCAGAAAGTCATGTCGCCTGTGCGTGCCACACAgagaaaaacactcaaccaatgattccagagcactggtttgtgaagactctagcttcctcattcctgaagtaggataattctaatttg-------tttgtttttcattatttctaatagtgttttgtttggtttaagctt-taattggtcactgtgat-actagtttaatagtctacccttttctgtgtcacttctccaatacctgctggtgtgat s panTro5.chr17 16349374 277 + 83181570 TCTGCATCTGTGTGCCTACAGGCTCTTGTATTGTAACTGCAGAAAGTCATGTTGCCTGTGCGTGCCACATAgagaaaaacactcaaccaatgattccagagcgctgatttgtgaagactctagcttcctcattcctgaagtaggataattataatttg-------tttgtttttcattatttctaatagtgttttgtttggtttaagctt-taattggtcactgtgat-actagtttaatagtctacccttttctgtgtcacttctccaatacctgctgttgtgat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254121 278 + 83442489 TCTGCATCTGTGTGCCTACAGGCTCTTGTATTGTAACTGCAGAAAGTCATGTCGCCTGTGCGTGCCACATAgagaaaaacactcaaccaatgattccagagcgctgatttgtgaagactctagcttcctcattcctgaagtaggataattataatttg-------tttgtttttcattatttctaatagtgttttgtttggtttaagcttataattggtcactgtgat-actagtttaatagtctacccttttctgtgtcacttctccaatacctgctggtgtgat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101265 277 + 4267968 TCTGCATCTGTGTGCCTACAGGCTCTTGTATTGTAACTGCAGAAAGTCATGTCGCCTGTGCGTGCCACACAgagaaaaacactcaaccaatgattccagagagctgatttgtgaagactctagcttcctcattcctgaagtaggataattctaatttg-------tttgtttttcattatttctaatagtgttttgtttggtttaagctt-taattggtcactgtgat-actagtttaatagtctacccttttctgtgtcacttctccaatacctgctggtgtgat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2086223 277 - 2193130 tctgcatctctgtgcctatgggctcttgtactgtaactgcagaaagtcatgtcgcctgtgcatgccacacagagaaaagcactcaaccaatggttccagacagctgatttgtgaagagtctagcttcctcatttctgaagtagaataattctaatttg-------tttgtttttcattatttctgatagtattttgtttggtttaagctt-taattggtcactgtgat-actagtttaatagtctacccttttctgtatcacttctccaatacctgctggtgtgat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052630 277 - 80997621 TCTGCATCTCTGTGCCTACGGGCTCTTGTATTGTAACTGCAGAAAGTCAAGTCGTCTGTGCGTGCCACACAgagaaaaacactcaaccaatgattccggagagctgatttgtgaagactctagcttcctcattcctgaagtaggataattctaatttg-------tttgtttttcattatttcTGGTAGTATTTTGTTTTGTCTAAGATT-TAGTTGGTCCCCGTGAT-ACTAATTTTATAGTCTACCCTTTTCTGTGTCACTTCTTCAATACCtgctggtgtgat i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2109146 277 + 10377808 tctgcatctctgtgcctacgagctcttgtattgtaactgcagaaagtcaagtcgtctgtgcatgccacacagagaaaaacactcaaccaatgattccggagagctgatttgtgaagactctagcttcctcattcctgaagtaggataattctaatttg-------tttgtttttcattatttcTGGTAGTATTTTGTTTTGTTTAAGATT-TAGTTGGTCCCCGTGAT-ACTAATTTTATAGTCTACCCTTTTCTGTGTCACTTCTTCAATACCtgctggtgtgat i macNem1.NW_012014910v1 C 0 I 2484 s cerAty1.NW_012006043v1 1994299 277 - 8458610 tctgcatctctgtgcctacgggctcttgtattgtaactgcagaaagtcatgtcgcctgtgcatgccacacagagaaaaacactcaaccaatgattccggagagctgatttgtgaagactctagcttcctcattcctgaagtaggataattctaatttg-------tttgtttttcattatttctgatagtattttgttttgtttaagctt-tagttggtcaccgtgac-actaatttaatagtctacccttttctgtgtcacttcttcaatacctgctggtgtgat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964093 276 + 75148670 TCTGCATCTCTGTGCCTAAGGGCTCTTGTATTGCACCTGTAGAAAGTCATGTCACCTGTGAATGCAACACAGAGGAAAACActcaaccaacaattctggagagctgatttataaagactctagcttcctcattcctgaagtaggataattctag-ctg-------tgtgtttttcatcatttctgataattttccctgtaacataagttt-cagttggtgactgtgat-actgacttaatagtgaacccttttctgtgtcacttccccactccctaccagtgtgat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2199639 276 + 4244037 TCTGCATCTCTGTGGCCAAGGGCTCTGGTATTGCAGCTGTAGAAAGTCATGTCACCTGTGAAGGCAACACAgagaaaaacactcaaccaatgattctggagagctgatgtataaagactctagcttcctcattcctgaagtagggtaattctag-ctg-------tgtgtttttcatcttttctgatagatttccctttagtttaaagtt-taattgctcactgtgat-actgacttaatagtgaaccctcttctgtatcacttccccagttcctaccagtgtaat i manLeu1.NW_012106252v1 I 21584 C 0 s colAng1.NW_012122154v1 2201505 269 + 4569836 TCTGCATCTCTGTGCCTATGGGCTCTTGTATTGTAACTGCAGAAAGTCATGTCTCCTGTGCATGCCACACAGAGAAAAA--------CAATGATTCCGGAGAGCTGATTTGTGAAGACTCTAGCTTCCTCATTCCTGAAGTAGGATAATTCTAATTTG-------TTTGTTTTTCATTATTTCTGATAGTATTTTGTTTTGTTTAAGCTT-TAGTTGGTCACCGTGAT-ACTAATTTAATAGTctacccttttctgtgtcacttcttcaatacttgctggtgtgat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46151808 273 - 159171411 tctgcatctctgtgcctaagggctcttgtattgcaactgaagaaagtcaagtcacctgtgcatgtcacacagag-aaatcattcaaccaatggttctggagagttgatttatgaagactctagctttgtccctcctgaagc-aggtcattctaacttg-------tttttttttcatcatttctgac-aatttttttttgttttaagc-t-taattggtcactgtgat-actaatttcttagtgtacccttttctttatcacttctccagcatctactgttgtgat i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872061 275 + 3513951 TCTCCATCTCTGTGCCTAAGGTCTCTTGCGTTGCAATTGAAGAAAGTCATGTCACCTGTGCACGTCACACACAG-AAagcattcaaccaatgattctggagagttgatttatggagactctagctttgttcttcctgaagtaagataattctaatttg--------ttgtttttcatcatttctgacaaatttttgtttggtttaagctt-tatttggtcactgtgat-actagtttagtagtgtacccttttctgtatcacttctccaacatctactggtgtgat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7651 282 - 4077172 TCTGCATCTCTGTGCCTAAGGGCTCTTGTATTGCAACTGAGGAAGGTGAAGTCACCTGTGCATGTCACACAGAG-AAATCATTCAACCAATGATTCTGGACAGTTGATTTATGAAGACCCTAACTTTGTCCTTCCTGAAGCAGGACAATTCTAAttttttttttttttttttttCATCATTTCTGACAATTTTTTGTTTCTTTTAAGC-T-TAATTGGTCCCTGTGAT-ACTAATTTATTAGTGTAcccttttctttatcacttctccagcctctactgttgtgat i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 1441 274 - 94492 TCTGCAACTCTGTGCCTAAGGGCTCTTGTATTGCAACTGAAGAAAGTCAAGTCACCTGTGCGTGTCACCCAGAG-AAATCATtcaaccaatgattctggagagttgatttatgaagactctaactttgtccttcctgaagcaggataattccaatttg--------tttttttccatcatttctgccaattttttgtttgttttcagc-t-taattggtcactgtggt-gctaatttagtagtgtacccttttctttatcacttctccagcatctactgttgtgag i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 629490 272 - 852752 TCTGAATGTCTCTTCCTAACAGCTTCTATTAAGCAAGTGGAGAAAGTCATGTATCCTGTGCATATCTTGctgagaaaaacactaaacccataattttggagatttggctt-taaagaccccagttccctcattcctttaatagaataattcaaacat--------tgtgtttat----acacctgataggttccattcaagtttaaactt-cacttgtgcattgtgacgacctgcttgatagtgtaattttccttgtgccactttcccaattcttaacagtgcaat i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=985388.000000 s hg38.chr17_JH159148v1_alt 38627 159 + 88070 ctgcactttcc-aataaactactttcactggaatatttttcttggagtttgtt-atggga-aaaccaaact-----CTGATATTACATTTcctctctcagactcaattttctcatctctacaatgggaacattaatacctactttgaatgtttcttcaagaattaat s panTro5.chr17 16349651 159 + 83181570 ctgcactttcc-aataaactactttcactggaatatttttcttggagtttgtt-atggga-aaaccaaact-----CTGATATTACATTTcctctctcatactcaattttctcatctctacaatgggaacattaatacctactttgaatgtttcttcaagaattaat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254399 159 + 83442489 ctgcactttcc-aataaactactttcactggaatatttttcttggagtttgtt-atggga-aaaccaaact-----CTGATATTACATTTcctctctcagactcaattttctcatctctacaatgggaacattaatacctactttgaatgtttcttcaagaattaat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101542 159 + 4267968 ctgcactttcc-aataaactactttcactggaatatttttcttggagtttgtt-atggga-aaaccaaact-----CTGATATTACATTTcctctctcagactcaattttctcatctctacaatgggaacattaatacctactttgaatgtttcttcaagaattaat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2086500 158 - 2193130 ctgtattttcc-aataaactactttcactggaatatttttctagaagtttgtt-atgcgg-aaaccaaaTT-----CTGATATTAcatttcctctctcagcctcaattttctcatctctacaatgggaacattaatacc-actttgaatgtttcttcaagaattaat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1994576 159 - 8458610 ctgcacttttc-aataaactactttcactggaatatttttctcggagtttgtt-atggga-aaaccaaact-----CTGATATTACATTTcctctctcagtctcaattttctcatctccacaatgggaacattaatacctactttgaatgtttcctgaagaattaat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964369 160 + 75148670 ctgcacttccc-agtaaactactttcactggaatcttttcttcagagtctctt-ctatgagaaactaatct-----atgacaATACGTTCActctctcagcctcaaatttctcatctctacaaagggaacattaatacctattttgaaagtttgttaaagagttaat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2199915 160 + 4244037 ctgcatttccc-aataaactagtttccctggaatcttttcttcagcgtctctt-ctgggagaaACTTATCT-----GTGACATTATGttaactccctcagcctcaattttcttatctctaccatgggaacatgaacacctattctgaaagtttgttaaagaattaat i manLeu1.NW_012106252v1 C 0 T 21127 s colAng1.NW_012122154v1 2201774 159 + 4569836 ctgcactttcc-aataaactactttcactggaatatttttctcggagtttgtt-atggga-aaaccaaact-----CTGATATTACGTTTcctctctcagtctcaattttctcatctccacaatgggaacattaatacctactttgaatgtttctttaagaattaat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152081 159 - 159171411 tcgtacttttc-aataaactactttcactggaatattttcctcagagtttgtt-atggga-aaaccaaact-----CTGATACTAcacttcttctctcagaatcagttgtctcatctctacaatgggaacattaacacctaatttgaaggtttcttcaagaattaat i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872336 159 + 3513951 cggtagttttc-aataaactactttcactggaatatttt-ctaagagtttgttgatagga-aaaccgaaCT-----CTGATATTACATTTcctctctcagtctcaattttctcatctctacaatgggaacattaacacctcctttgagtgtttcttcaataattaat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 7933 159 - 4077172 tcgtacttttc-aataaactactttcactggaatattttcctcagagtttctt-atggga-aaaccaaact-----CCGATAGTAcactttctctcccagcctatattttctcatctctacagtgggaacattaatacctaccttgaatgtttcttcaagaattaat i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 1715 159 - 94492 ccattcttttc-aacaaactactttcactggaatattttcctcagagtttgtt-atggga-aaaccaaact-----CTGATACTAcacttcctctctcagcctcaattttctcatctctacaatgggaacattaacacctactttgaatgtttcttcaggaatgaat i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 629762 166 - 852752 ttatacttccctaataaactactttcacttgaatctttttcttggcattgtac-atgggagaaaccaaaccaTATGATggcattactttaactctcttagcttttatttcctcatctctaaaaggaaggtattaatgcctaccttgctagcttcttcaagaatttga i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=347107.000000 s hg38.chr17_JH159148v1_alt 38786 60 + 88070 gataatgttcataaagcatttaat-caatacccattaaatagtaggcaacctaggacatat s panTro5.chr17 16349810 60 + 83181570 gataatgttcataaagcatttaat-caatacccattaaatagtaggcaacctaggacatat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254558 60 + 83442489 gataatgttcataaagcatttaat-caatacccattaaatagtaggcaacctaggacatat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101701 60 + 4267968 gataatgttcataaagcatttaat-caatacccattaaatagtaggcaacctaggacatat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2086658 60 - 2193130 gataatgttcataaagaatttaat-caatacccattaaatagtaggcaacttaggacatat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1994735 60 - 8458610 gataatgttcataaagcatttaac-caataaccattaaatggtaggcaacctaggacatat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964529 54 + 75148670 agtaatgtacacaaagcacttagc-caat-accatcatatagcaggcatcccagaa----- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2178948 60 + 4244037 GATAATGTTCATAAAGCATTTAAC-CAATAACCATTAAATGGTAGGCAACCTAGGACATAT i manLeu1.NW_012106252v1 T 21127 C 0 s colAng1.NW_012122154v1 2201933 60 + 4569836 gataatgttcataaagcatttaAT-CAATAACCATTAAATGGTAGGTAACCTAGGACATAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152240 60 - 159171411 gataatatccataaggcatttagt-taatgcccatgaaatggtaggcagcctaggacatat i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872495 60 + 3513951 gaaaatatccataaaagttttagt-caatacccatgaaatagtaggcaacccaggacatat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8092 60 - 4077172 gattatatccacaaggcatttagt-caatacccatgtaatagtaggcAACCTGTGACTTAT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 1874 60 - 94492 gataatgtccataaggcatttaat-caatgcccatgaaatagtaggcaagctaggacatat i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 629928 61 - 852752 gataatctatacagagcatctagtccaataccttgtgagcagtGGACAAACCAGAATATTT i dasNov3.JH570468 C 0 T 84952 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=403731.000000 s hg38.chr17_JH159148v1_alt 38846 76 + 88070 tag---ttttttttTTGTCCAGAGAA------------------------------------CTCCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATC s panTro5.chr17 16349870 76 + 83181570 tag---ttttttttTTGTCCAGAGAA------------------------------------CTCCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254618 76 + 83442489 tag---ttttttttTTGTCCAGAGAA------------------------------------CTCCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101761 76 + 4267968 tag---ttttttttTTGTCCAGAGAA------------------------------------CTCCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2086718 78 - 2193130 tagtt-ttttttttTTGTCCAGAGAA------------------------------------CTTCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATC i nomLeu3.chrUn_GL397460_1 C 0 I 1569 s cerAty1.NW_012006043v1 1994795 79 - 8458610 tagttTTCGTTTTTTTGTCCAGAGAA------------------------------------CTTCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964583 73 + 75148670 ------ttagtgttttgttCAGAAAA------------------------------------TTCCTAATTTTAATGTTGAAGATAAGAATATTTTTGTAATAATTAACTAGATC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179008 79 + 4244037 TGGTTTTCGTTTTTTTGTCCAGAGAA------------------------------------CTTCTAATTTTAATGTTGAAGATAAGAATACATGAATAATAATTAACCAGATC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2201993 79 + 4569836 TAGTTTTCACTTTTTTGTCCAGAGAA------------------------------------CTTCTAATTTTAATGTTGAAGACAAGAATACATGAATAATAATTAACCAGATC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152300 112 - 159171411 tag---ttgttTCTATGTCCATAGAAAATATTCTGTTTTATTCTACAGGATGTTCATAGAACATTCTAATTTTAATGTTGAAGATAAGAAACCATGAATCATAATTAACTAGATT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872555 76 + 3513951 tag---ttgtttttTTGTCCATAGAA------------------------------------CTTCTAGTTTTAATGTTGAAGGTAAGAAAACATGAATCATAATTAACTAGATT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8152 76 - 4077172 TAG---TTGTTTTTTTGTCCATAGAA------------------------------------CTTCTAGTTTTAATGTTGAAGATAAGAAAACATTAGTAATAATTATGTAGATT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 1934 76 - 94492 tag---ttgtttttATATCCCTAGAA------------------------------------CTTCCAGTTTTAATGTTGATGATAAAAAAACATGAATAATAATTAACTAGATG i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=304061.000000 s hg38.chr17_JH159148v1_alt 38922 57 + 88070 AACTCACTTCTTTCtttactagctttattgaggcataattgataaataaaaataaaa s panTro5.chr17 16349946 57 + 83181570 AACTCACTTCTTTCtttactagctttattgaggcataattgataaataaaaataaaa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254694 57 + 83442489 AACTCACTTCTTTCtttactagctttattgaggcataattgataaataaaaataaaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101837 57 + 4267968 AACTCACTTCTTTCtttactagctttattgaggcataattgataaataaaaataaaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088365 57 - 2193130 aacTCACTTCTTTCtttactagctttactgaggcataattgataaataaaaataaaa i nomLeu3.chrUn_GL397460_1 I 1569 C 0 s cerAty1.NW_012006043v1 1994874 57 - 8458610 AACTCACTTCTTTCtttactagctttattgaggcataattgataaataaaaataaaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964656 52 + 75148670 AACTAAATACATTtttttctagctgtgctgaggtataattgacaaatg-----aaaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179087 57 + 4244037 AACTCACTTCTTTCtttactagctttattgaggcataattggtaaataaaaataaaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202072 57 + 4569836 AACTCACTTCTTTCtttactagctttattgaggcataattgataaataaaaataaaa i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152412 56 - 159171411 AACTAACTTCATt-tttactagctttattgagacacaattgaccaataaagatgaaa i calJac3.chr5 C 0 I 1 s saiBol1.JH378271 1872631 52 + 3513951 AACTAACTTCATt-tttactagctttattgaggcaca----actaacaaaaataaaa i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 8228 56 - 4077172 AACTAACTTCTTt-tttactggctttattgagacacaattgacaaataaaaataaaa i cebCap1.NW_016107543v1 C 0 I 1 s aotNan1.NW_018505111v1 2010 56 - 94492 AACTATCTTCTTt-tttgatagctttattgagacacacttgacaaataaaaataaaa i aotNan1.NW_018505111v1 C 0 I 48 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=147840.000000 s hg38.chr17_JH159148v1_alt 38979 49 + 88070 ttgtgtatatttaatgtgtacga---------------------------------------------------ggtgatgttt--------------------------tgag--------------------------atatgtatatac s panTro5.chr17 16350003 49 + 83181570 ttgtgtatatttaatgtgtacga---------------------------------------------------ggtgatgttt--------------------------tgag--------------------------atatgtatatac i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254751 49 + 83442489 ttgtgtatatttaatgtgtacga---------------------------------------------------ggtgatgttt--------------------------tgag--------------------------atatgtatatac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101894 49 + 4267968 ttgtgtatatttaatgtgtacga---------------------------------------------------ggtgatgttt--------------------------tgag--------------------------atatgtatatac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088422 75 - 2193130 ttgtgtatatttaatgtgtatga---------------------------------------------------ggtgatgttt--------------------------tgagatatatatatacgtatatatatacatatatatatatac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1994931 49 - 8458610 ttgtgtatatttaatgtgtacaa---------------------------------------------------cgtgatgttt--------------------------tgag--------------------------atatatgtatat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964708 45 + 75148670 ttgtatatatttcaggaatacaa---------------------------------------------------ggtgatgctc--------------------------tgac--------------------------ata----tatat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179144 49 + 4244037 ttgtgtatatttaatgtgtacga---------------------------------------------------cgtgatgttt--------------------------tgag--------------------------atatatgtatat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202129 49 + 4569836 ttgtgtatatttaatgtatacaa---------------------------------------------------cgtgatattt--------------------------tgag--------------------------atatgtgtgtat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152469 124 - 159171411 ttgtgtgtgtctaaagtgtaTgaaggaaggcagggaggaaggagaaactaagaaggaatggaaagaaaggaggGGGAGATATATAAAATGAAGGCCAATGGAACAAGCAACAGg--------------------------atatatatat-- i calJac3.chr5 I 1 C 0 s saiBol1.JH378271 1872684 47 + 3513951 ttgtgtatatttaatgtgtgtga---------------------------------------------------ggtgttgttt--------------------------cagg--------------------------atatatacat-- i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 8285 49 - 4077172 ttgtgtatgtctaaagtgtatga---------------------------------------------------ggtgttgttt--------------------------cagg------------------------atatatatatat-- i cebCap1.NW_016107543v1 I 1 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 2066 48 - 94492 I e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=448840.000000 s hg38.chr17_JH159148v1_alt 39028 91 + 88070 ttattgtga-attatcatatattccttagctcacatagtt-accatttcctttttatttttgtggtgtaaacacttcagatctaccttcttag s panTro5.chr17 16350052 74 + 83181570 ttattgtga-atcatcatatattccttagctcacatagtt-accatttcctttttatttttgtggtgtaaacactt----------------- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254800 74 + 83442489 ttattgtga-atcatcatatattccttagctcacatagtt-accatttcctttttatttttgtggtgtaaacactt----------------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4101943 74 + 4267968 ttattgtga-atcatcatatattccttagctcacatagtt-accatttcctttttatttctgtggtgtaaacactt----------------- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088497 74 - 2193130 ttattgtga-atcatcatatattccttagctcacatagtt-accatttcctttttatttttgtggtgtgaacactt----------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1994980 92 - 8458610 ttattgtgatatcatcatatattccttagctcacatagta-gccatttcctttttacttttgtggtgtgaacacttcagatctaccttcttag i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964753 88 + 75148670 tcattgtga----atagcatattcattaggtcacgtagtt-accatttcctttttatttttgtggtgtgaacatttaagatctaccttctcag i chlSab2.chr16 C 0 I 5566 s manLeu1.NW_012106252v1 2179193 92 + 4244037 ttattgtgatatcatcatatattccttagctcacatagtt-gccatttccttttaacttttgtggtgtgaacacttcagatctaccttcttag i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202178 92 + 4569836 ttattgtgatatcatcatatattccttagctcacatagtt-accatttcctttttatttttgtgttgtgaacacttcagatctaccttcttag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152593 92 - 159171411 ttattgtgaaatcataatatattccctaactcacatagtt-acaatttccttttcacttttatggtgtgaatacctcagatctaccttcttag i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872731 92 + 3513951 ttattgtaaaatcataatatattccttagctcacatagtt-acaatttccttttcatttgtatgctgtgaacagctcagatctaccttcttag i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8334 93 - 4077172 ttattgtgaaatcataatatattccttagctcacatagttaacaatttccttttcatttttatggtgtgaacagctcagatctaccttcttag i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2114 92 - 94492 ttattgtgaaatcataatatattccttagctcacatggtc-acaatttccttttcatttgtatggtgtgaacacctcagatctaccttcttag i aotNan1.NW_018505111v1 I 48 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=-12022.000000 s hg38.chr17_JH159148v1_alt 39119 9 + 88070 caacactcc-- s panTro5.chr17 16350126 1 + 83181570 --------c-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254874 1 + 83442489 --------c-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102017 1 + 4267968 --------c-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088571 1 - 2193130 --------c-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1995072 1 - 8458610 --------c-- i cerAty1.NW_012006043v1 C 0 I 2 s manLeu1.NW_012106252v1 2179285 1 + 4244037 --------c-- i manLeu1.NW_012106252v1 C 0 I 2 s colAng1.NW_012122154v1 2202270 1 + 4569836 --------c-- i colAng1.NW_012122154v1 C 0 I 2 s calJac3.chr5 46152685 3 - 159171411 --------caa i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872823 3 + 3513951 --------aaa i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8427 3 - 4077172 --------caa i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2206 3 - 94492 --------caa i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e chlSab2.chr16 64964841 5566 + 75148670 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=23180.000000 s hg38.chr17_JH159148v1_alt 39128 18 + 88070 agatctaccttcttagca s panTro5.chr17 16350127 18 + 83181570 agatctaccttcttagca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254875 18 + 83442489 agatctaccttcttagca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102018 18 + 4267968 agatctaccttcttagca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088572 18 - 2193130 aaatctaccttcttagca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s chlSab2.chr16 64970407 18 + 75148670 agatctaacttcttggca i chlSab2.chr16 I 5566 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 2209 0 - 94492 C e cebCap1.NW_016107543v1 8430 0 - 4077172 C e canFam3.chr9 39587489 1462 - 61074082 I e manLeu1.NW_012106252v1 2179286 2 + 4244037 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e saiBol1.JH378271 1872826 0 + 3513951 C e calJac3.chr5 46152688 0 - 159171411 C e colAng1.NW_012122154v1 2202271 2 + 4569836 I e cerAty1.NW_012006043v1 1995073 2 - 8458610 I e macNem1.NW_012014910v1 2109423 2484 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=607762.000000 s hg38.chr17_JH159148v1_alt 39146 92 + 88070 catttcaggtataaaataaagcatttttgttaactatagtcacgttgctgtacactagatctgcagaactgactcatcttgcataaccgaTG s panTro5.chr17 16350145 92 + 83181570 catttcaggtataaaataaagcatttttgttaactatagtcacgttgctgtacactagatctgcagaactgactcatcttgcataaccgaTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254893 92 + 83442489 catttcaggtataaaataaagcatttttgttaactatagtcacgttgctgtacactagatctgcagaactgactcatcttgcataaccgaTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102036 92 + 4267968 catttcaggtataaaataaagcatttttgttaactatagtcacgttgctgtacactagatctgcagaactgactcatcttgcataaccgaTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088590 92 - 2193130 catttcaggtataaaataaagcatttttgttaactatagtcacgttgctgtacactagatctgcagaactgactcagcttgcataactgaTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2111907 89 + 10377808 catttcaggtataaaataaagtattt---ttagctataaccacactactgtacagtaggtctacagaatttattcatcttgcataactgaTG i macNem1.NW_012014910v1 I 2484 C 0 s cerAty1.NW_012006043v1 1995075 91 - 8458610 -acttcaggtataaaataaagcatttttgttaactatagtcatgttgctgtacactagatctgcagaactgactcatcttgcataactgaTG i cerAty1.NW_012006043v1 I 2 C 0 s chlSab2.chr16 64970425 89 + 75148670 aatttcaggtatatgataaagtgttt---ataactatagtgacattactgtacagtagatgtgctgaactgattcatctttcataactgaTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179288 91 + 4244037 -acttcaggtataaaataaagcatttttgttaactatagtcatgttgctgtacactagatctgcagaactgactcatcttgcataactgaTG i manLeu1.NW_012106252v1 I 2 C 0 s colAng1.NW_012122154v1 2202273 91 + 4569836 -acttcaggtataaaataaagcatttttgttaactatagtcacgttgctgtacactagatctgcagaactgactcatcttgcataactgaTG i colAng1.NW_012122154v1 I 2 C 0 s calJac3.chr5 46152688 91 - 159171411 -attttgggtatacattaaaacatttttgttaaccatagtcactttgttgtacactagatctgcagaagttactcatcttgcacaactgaTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872826 91 + 3513951 -atttcaggtatacaataaaatattgttgttcactacagtcactttgttgtacactagatctgcagaagttacttatcttgcaaaactgaTG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8430 91 - 4077172 -atttcttgtatgcaataaaacatttttgttaactatcgtcacgttgttgtacactagatctgcagaagttactcatcttgcaaaactgaTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2209 91 - 94492 -atttcgggtatataataacacattttttaaaactatagtcacgttgttgtacactagatctgcagaagttactcatcttgcaaaactgaTG i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e dasNov3.JH570468 629989 84952 - 852752 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=490174.000000 s hg38.chr17_JH159148v1_alt 39238 79 + 88070 TTGGTCAAA--GAGAATGTGATAGTTCTTCAGTTTCTTTACCCCATTATGCAACAACTATCA-CAGTCAG------------TGGCTTTTGTCC s panTro5.chr17 16350237 79 + 83181570 TTGGTCAAA--GAGAATGTGATAGTTCTTCAGCTTCTTTACCCCATTATGCAACAACTATCG-CAGTCAG------------TGGCTTTTGTCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16254985 79 + 83442489 TTGGTCAAA--GAGAATGTGATAGTTCTTCAGCTTCTTTACCCCATTATGCAACAACTATCG-CAGTCAG------------TGGCTTTTGTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102128 79 + 4267968 TTGGTCAAA--GAGAATGTGATAGTTCTTCAGCTTCTTTACCCCATTATGCAACAACTATCG-CAGTCAG------------TGGCTTTTGTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088682 79 - 2193130 TTGGTCAAA--GAGAATGTGATAGTTCTTCAGCTTCTTTACCCCATTATGCAACAACTATCA-CAGTCAG------------TGGCTTTTGTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2111996 79 + 10377808 TTGGCCAAA--GTGAATGTTTTAGGTCTTCATCTTCTTTACCCTGTCACCCAAGAAGAATCA-CAGTCAA------------TGGATTTTGTCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1995166 79 - 8458610 TTGGTTAAA--GAGAATGTGATAGTTCTTCACCTTCTTTGCCCCATTATGCAACAGCTATCA-CAGTCAG------------TGGCTTTTGCCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970514 78 + 75148670 CTGGTCAAA--GAGAATGTCCTAGTT-TTCATCTCCGTTACTTCATCCCTGAACAATGATCA-CAGTAAG------------CGGCCGTTGTCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179379 79 + 4244037 TCGGTCAAA--GAGAATGTGATAGTTCTTCACCTTCTTTACCCCATTATGCAACAGCTATCA-CAGTCAC------------TGGCTTTTGTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202364 79 + 4569836 TTGGTCAAA--GAGAATGTGATAGTTCTTCAACTTCTTTACCCCATTATGCAACAACTATCA-CAGTCAG------------TGGCTTTTGTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152779 90 - 159171411 TTGGTCAGA---ACAATGTGATAGTTCTTCATCTTCTTTACCCCATCACATAATAACTATCA-CAGTCAGTATCACAGTCATTGACTTTCGTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872917 78 + 3513951 GTGGTCAAA---AGAATGTGATAGTTCTTCACCTTTTTTACCCCATCACACAATGACTATCA-CAGTCAG------------TGACCTTTGTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8521 78 - 4077172 TTGGTCAAA---AGAATGTGATATTTTTTCATCTTCTTTATCCCATCAAACAATGACTATCA-CAGTCAG------------TGACTTTTGTCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2300 78 - 94492 TTGGTCAAA---AGAATGTGATAGGTCTTCACCTTCTTCACCCCATCACACAATGACCATCA-CAGTCAG------------TGACTTTCGTCT i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 545037 82 - 852752 TTGGTTGAACCCAGAATATTTTGATTCCTCATCTCATTCACCCATCACTTCATTGGTAATCAGCAGGTAG------------AAAGTTCAGACT i dasNov3.JH570468 T 84952 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 39587489 1462 - 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=250334.000000 s hg38.chr17_JH159148v1_alt 39317 36 + 88070 CTTAGCTGAGTCTTCTGAGCATTCTAGATACACCAC s panTro5.chr17 16350316 36 + 83181570 CTTAGCTGAGTCTTCTGAGCATTCTAGATACACCGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255064 36 + 83442489 CTTAGCTGAGTCTTCTGAGCATTCTAGATACACCGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102207 36 + 4267968 CTTAGCTGAGTCTTCTGAGCATTCTAGATACACTGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088761 36 - 2193130 CTTAGCTGAGTCTTCTGAGCATTCTAGATACATTGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2112075 36 + 10377808 CTTAGCCAAGTCTTCAAAGCATTCTAGGTACACAGT i macNem1.NW_012014910v1 C 0 I 8943 s cerAty1.NW_012006043v1 1995245 36 - 8458610 CTTAGCTGAGTCTTCAGAGCATCCTAGATATGCCGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970592 35 + 75148670 CTTAGCTAAGTCTTCAGAGCA-TCTAGATTCACAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179458 36 + 4244037 TTTAGCTGAGTCTTCAGAGCATTCTAGATACACCAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202443 36 + 4569836 CTTAGCTGAGTCTTTAGAGCATTGTAGATACACCGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152869 36 - 159171411 CTTAGCTGAGTCTTCAGAGCATTCTAGATACACTGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1872995 36 + 3513951 GTTAGCTGAGTGTTCAGAGCATTCTAGATACACCAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8599 36 - 4077172 GTTAGCTGAGTCTTCAGAGCATTCAAGATACACCAC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2378 36 - 94492 CTTAGCTGAGTCTTCAGAGCATTCTAGATACACCGC i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39588951 36 - 61074082 CTTGGCAGCCTGTCCAGAGCCTCCCATAGAGCTAGT i canFam3.chr9 I 1462 C 0 s dasNov3.JH570468 545119 31 - 852752 CTTGGTTG-----TCTGAACAAGTTCGACACATGCT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=56910.000000 s hg38.chr17_JH159148v1_alt 39353 7 + 88070 CTCAGAA s panTro5.chr17 16350352 7 + 83181570 CTCAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255100 7 + 83442489 CTCAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102243 7 + 4267968 CTCAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088797 7 - 2193130 CTCAGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121054 7 + 10377808 CTCAAAA i macNem1.NW_012014910v1 I 8943 C 0 s cerAty1.NW_012006043v1 1995281 7 - 8458610 CTTAGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970627 7 + 75148670 CTCAGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179494 7 + 4244037 CTTAGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202479 7 + 4569836 CTTAGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152905 7 - 159171411 CTCAGAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1873031 7 + 3513951 CTCAGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8635 7 - 4077172 CTCAGAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2414 7 - 94492 CTCAGAA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39588987 7 - 61074082 CTCCAAT i canFam3.chr9 C 0 T 1647 s dasNov3.JH570468 545150 7 - 852752 TTTGGAT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1126896.000000 s hg38.chr17_JH159148v1_alt 39360 156 + 88070 GCTGGTATCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGGTATTTCTACCACTCCCATGCCGGTAGGAGGTCCCAAGAAGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAATGAATCCCTCC--ATGACTGAATACTT s panTro5.chr17 16350359 156 + 83181570 GCTGGTATCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGGTATTTCTACCACTCCCATGCCGGGAGAAGGTCCCAAGAAGGTGGACCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAATGAATCCCTTC--ATGACTGAATACTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255107 156 + 83442489 GCTGGTATCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGGTATTTCTACCACTCCCATGCCGGGAGGAGGTCCCAAGAAGGTGGACCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAATGAATCCCTCC--ATGACTGAATATTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102250 156 + 4267968 GCTGGTATCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGGTATTTCTACCACTCCCATGATGGTAGGAGGTCCCAAGAAGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAGTGAATCCCTCC--ATGACTGAATACTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088804 156 - 2193130 GCTGGTGTCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGGTATTTCTACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGCGGCCCAGGTCCCTAACTTTTCTAATTCTCTCAGAGCCAGTATCAATGAATCCCTCC--ATGACTGAATACTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121061 156 + 10377808 GTTGGCATCTGTCATGGAAATCCACATTGTTAGCTCATCAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCCGACTTTTCAATTTCTCTCAGAGTCAGCATCAATCAATCCTTAC--ATGAGTGAATGCTT i macNem1.NW_012014910v1 C 0 T 8943 s cerAty1.NW_012006043v1 1995288 156 - 8458610 GCTGGCATCTGTCCTGGAAACCTACATCGTTAGCTCCTCAGAGGTATTTCTATCATTCCCATGCTGGTAGGAGGTCCCAAGAAGGGGGCCCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAATCAACCCCTCC--ATGATTGAATACTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970634 156 + 75148670 GTTGGCATCTGTCATGGAAATCTACTTTGCTAGCTCATCAGAGGTATTTCCACCACTCCCATGGTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCCAAACTTTATATTTCTCTCAGAGCCAATATCAATCAATCCTTCC--ATGAGTGAGTGCTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179501 156 + 4244037 GCTGGCGTCTGTCCTGGTAACCTACATCGTTAGCTCCTCAGAGGTATTTCTATCATTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAATCAACCCCTCC--ATGATTGAATACTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202486 156 + 4569836 GCTGGCATCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGCTATTTCTATCATTCCCATGCTGGTAGGAGGTCCCAAGAAGGGGGCCCAGGTCCCTAACTTTTCTAATTCTCTCAGGGCCAGTATCAATCAACCCCTCC--ATGATTGAATACTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46152912 156 - 159171411 GTTGGCATCTGTCTTGGAAACCTACCTTGTTAGCTCTTCAGAAGTATTTTTACCCGTCCCACGCCGGCAGGAGGTCCCAAGATGGTGGCCCAGGTCCCTAACAGTTCTAATTCTCTCAGGGCCAGTATCAATCAATCATTCC--ATGACTGAATACTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1873038 156 + 3513951 GTTGGCATCTGTCTTGGAAACCTACATTGTTAGCTCATTAGAGGTATTTTTACCCGTCCCACGCTGGTAGGAGGTCACAAGATGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTTAGGGACAGTACCAATCAATTCTTCC--ATGACTGAATACTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8642 156 - 4077172 GTTGGCATCTGTCTTGGAAACCTACATTGTTAGCTCATCAGAGGTATTTTTACCCATCCCATGCTGGTAGGAGGTGCCAAGATGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTCGGGGTCAGTATCAATCAATTATTCC--ATGACTGAATACTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2421 156 - 94492 GTTGGCATCTGTCCTGGAAACCTACATTGGTAGCTCATCAGAGGTACTTTTACCCATCCCACGCTGGTAGGAGGTCCCAAGATGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTCGGGGCCGGTATCAATCCATCGTTCC--ATGACTGAATACTT i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478143 132 + 61074082 GTTGGTGTGTGCCCTGGGCAGGAGCCTTCCTGGTTCTTCAGAGGTCCCTCCACTGCTCCT-------------------GGGAGTTGACACAGGG-CCTAGGTTTCCTCTTCCTCT------CAGTCTGAATTAAGCATCTCAAATCCCTGAGCACCA i canFam3.chr9 T 3101 I 1 s dasNov3.JH570468 545157 114 - 852752 TCTGGTGTGCTTCCCTCATATGTGTACTGTTAGGTCATCACAGATACTTCTTTTGCTCTCA--------------------AGGAAGGACAAAGTCCCTGAACCTTCTATTACTGTCA-AGTCAGTATCAGGCTT----------------------- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=-748.000000 s hg38.chr17_JH159148v1_alt 39516 1 + 88070 -C s panTro5.chr17 16350515 1 + 83181570 -C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255263 1 + 83442489 -C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102406 1 + 4267968 -C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088960 1 - 2193130 -C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1995444 1 - 8458610 -C i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970790 1 + 75148670 -A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179657 1 + 4244037 -C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202642 1 + 4569836 -C i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153068 1 - 159171411 -C i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1873194 1 + 3513951 -C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8798 1 - 4077172 -C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2577 1 - 94492 -C i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 545271 1 - 852752 G- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21478275 1 + 61074082 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macNem1.NW_012014910v1 2121217 8943 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=98124.000000 s hg38.chr17_JH159148v1_alt 39517 15 + 88070 AGTTGCATCATCAGT--- s panTro5.chr17 16350516 15 + 83181570 AGTTGCATCATCAGT--- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255264 15 + 83442489 AGTTGCATCATCAGT--- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102407 15 + 4267968 AGTTGCATCATCAGT--- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088961 15 - 2193130 AGTTGCATCATCAGT--- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2112274 15 + 10377808 GGTTGCATCATCAGT--- i macNem1.NW_012014910v1 T 8943 C 0 s cerAty1.NW_012006043v1 1995445 15 - 8458610 AGTTGCATCATCAGT--- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970791 12 + 75148670 ACTTG---CATCAAT--- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179658 15 + 4244037 AGTTGCATCATCAGT--- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202643 15 + 4569836 AGTTGCATCATCAGT--- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153069 15 - 159171411 AGTTGCGTCATCAGT--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1873195 15 + 3513951 AGGTGCATCAGCAGT--- i saiBol1.JH378271 C 0 T 12136 s cebCap1.NW_016107543v1 8799 15 - 4077172 ATTTGCATCATCACT--- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2578 15 - 94492 AGTTGCGTACTCAGT--- i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478276 15 + 61074082 AGCTGCATCATTACT--- i canFam3.chr9 I 1 I 4 s dasNov3.JH570468 545272 15 - 852752 ---TGTAGCTTCCTTTCA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=588699.000000 s hg38.chr17_JH159148v1_alt 39532 80 + 88070 TCAGGAACAAAAGCGCCAGTTTTCCATCTATCATGACTTCCATGAATGAGAAAGTTCTTCCACGTTTCCTCCTTCTTAAA s panTro5.chr17 16350531 80 + 83181570 TCAGGAACAAAAGCGCCAGTTTTCCATCTATCATGACTTCCATGAATCAGAAAGTTCTTCCACGTTTCCTCCTTCTTAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255279 80 + 83442489 TCAGGAACAAAAGCGCCAGTTTTCCATCTATCATGACTTCCATGAATCAGAAAGTTCTTCCACGTTTCCTCCTTCTTAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102422 80 + 4267968 TCAGGAACAAAAGCGCCAGTTTTCCATCTATCATGACTTCCATGAATGAGAAAGTTCTTCCACGTTTCCTTCTTCTTAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088976 80 - 2193130 TCAGGAACAAAAGCACCAATCTTCCATCTATCATGACTTCCATGAATGAGAAAGTTCTTACACTTTTCCTCCTTCTTAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2112289 80 + 10377808 TTGGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGCACACATTTTTCTACTTTTAGTCCTTCTTACA i macNem1.NW_012014910v1 C 0 I 12650 s cerAty1.NW_012006043v1 1995460 80 - 8458610 TCAGGAACAAAAGCACCAGTCTTCCATCTGTCATGACTTCCATGAATGAGAAAGTTCTTCCACTTTTCCTCCTTCTTAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970803 76 + 75148670 TCAGGACCAAAAGCACCAG-CTTCTGTCTATCATGACTTCTATGAATGCACAAGTTCT---ACTTTGCTCCTTTCTTACA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179673 80 + 4244037 TCAGGAACAAAAGCACCAGTCTTCCATCTGTCATGACTTCCATGAATGAGAAAGTTCTTCCACTTTTCCTCCTTCTTAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202658 80 + 4569836 TCAGGAACAAAAGCACCAGTCTTCCATCTATCATGACTTCCATGAATGAGAAAATTCTTCCACTTTTCTTCCTTCTTAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153084 80 - 159171411 TCAGGAACAAAAGTACCAGTCTTCCATCTATCGTGTCTTCCACAAATGAGAAAGTTCTTCCACTTTTCCTCCTTCTTAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1861074 80 + 3513951 TCAGGAACAGAAGTACCAGTCTTCCGTCTATTGTGTCTTCCACAAATGAGAAAGTTCTGCCACTTTTCCTCCTTCTTAAA i saiBol1.JH378271 T 12136 C 0 s cebCap1.NW_016107543v1 8814 80 - 4077172 TCAGGAACAAAAGTACCAGTCTTCCATCTATCGTGTCTTCCACGAATGAGAAAGTTCTACCACTTTTCCTTCTTCTTAAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2593 80 - 94492 TCAGGAACAAAAGTACTAGTCTTCCATCTATCGTGTCTTCCAGGAATGAGAAAGTCCTTCCACTTTTCCTCCTTCTTAAA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478295 79 + 61074082 TCAGGACCAGAAGTGCTAGGCTTCTGTCTCTGGCAACTCCTATGAATGCCCACATTTTTTCTC-TTTCTTCTTCCTCACA i canFam3.chr9 I 4 I 10 s dasNov3.JH570468 545287 77 - 852752 TCACAATTAAAAGCAGCAGCCTCCTATCTGTCATAACTCTCATGTATGCACAGGTTCTTCTATTTGTTTTTCGACAA--- i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=173778.000000 s hg38.chr17_JH159148v1_alt 39612 21 + 88070 TTCTTCTGATTTCC-CTGGAAA s panTro5.chr17 16350611 21 + 83181570 TTCTTCTGATTTCC-CTGGAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255359 21 + 83442489 TTCTTCTGATTTCC-CTGGAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102502 21 + 4267968 TTCTTCTGATTTCC-CTGGAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089056 21 - 2193130 TTCTTCTGATTTCC-CTGGAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2125019 21 + 10377808 TTCTTCTGATTTCC-CTGGAAA i macNem1.NW_012014910v1 I 12650 C 0 s cerAty1.NW_012006043v1 1995540 21 - 8458610 TTCTTCTGATTTCT-CTGGAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970879 21 + 75148670 TTCTTCTGATTTCC-CTGGAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179753 21 + 4244037 TTCTTCTGATTTCC-CTGGAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202738 21 + 4569836 TTCTTCTGATTTCC-CTGGAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153164 21 - 159171411 TTCTACTGATATCC-CTGAAAA i calJac3.chr5 C 0 I 1 s saiBol1.JH378271 1861154 21 + 3513951 TTCTACTGATTTCC-CTGGAAA i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 8894 21 - 4077172 TTCTACTGATTTCC-CTGGAAA i cebCap1.NW_016107543v1 C 0 I 1 s aotNan1.NW_018505111v1 2673 21 - 94492 TTCTACTGATTTCC-CTGAAAA i aotNan1.NW_018505111v1 C 0 I 11 s canFam3.chr9 21478384 21 + 61074082 TCCCTCCATTTTTT-CTGCCCA i canFam3.chr9 I 10 I 9 s dasNov3.JH570468 545364 19 - 852752 ---TACTTGTTTCCACTAAAAA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=20899.000000 s hg38.chr17_JH159148v1_alt 39633 11 + 88070 CACAGGTTTTT- s panTro5.chr17 16350632 11 + 83181570 CACAGGTTTTT- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255380 11 + 83442489 CACAGGTTTTT- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102523 11 + 4267968 CACAGGTTTTT- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089077 11 - 2193130 CAGAGGTTTCT- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2125040 11 + 10377808 CAAAAGTTTTT- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1995561 11 - 8458610 CACAGGTTTTT- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970900 10 + 75148670 CACA-GTTTTT- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2179774 11 + 4244037 CACAGGTTTTT- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202759 11 + 4569836 CACAGGGTTTT- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153186 10 - 159171411 CAGAAGAACT-- i calJac3.chr5 I 1 C 0 s saiBol1.JH378271 1861176 10 + 3513951 CAGAAGAATT-- i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 8916 10 - 4077172 CAGAAGAATT-- i cebCap1.NW_016107543v1 I 1 C 0 s canFam3.chr9 21478414 11 + 61074082 CAGGCAGCTTT- i canFam3.chr9 I 9 C 0 s dasNov3.JH570468 545383 10 - 852752 --CAATGCTTTA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 2694 11 - 94492 I e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=59276.000000 s hg38.chr17_JH159148v1_alt 39644 9 + 88070 GGTTTCTTG s panTro5.chr17 16350643 9 + 83181570 GGTTTCTTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255391 9 + 83442489 GGTTTCTTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102534 9 + 4267968 GGTTTCTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089088 9 - 2193130 GGTTTCCTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2125051 9 + 10377808 TGTTTCTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1995572 9 - 8458610 GGTCTCTTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64970910 9 + 75148670 AGTTTCTTG i chlSab2.chr16 C 0 I 426 s manLeu1.NW_012106252v1 2179785 9 + 4244037 GGTCTCTTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202770 9 + 4569836 GGTCTCTTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153196 9 - 159171411 GGTTTCTTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1861186 9 + 3513951 CGTTTCTTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8926 9 - 4077172 GGTTTCTTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2705 9 - 94492 GGTTTCTTT i aotNan1.NW_018505111v1 I 11 C 0 s canFam3.chr9 21478425 8 + 61074082 -CTTTCCCT i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 545393 9 - 852752 ATTTTCCTC i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=195346.000000 s hg38.chr17_JH159148v1_alt 39653 26 + 88070 AGATGCTTCCTATTTGCCTCACAAAA s panTro5.chr17 16350652 26 + 83181570 AGATGCTTCCTATTTGCCTCACAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255400 26 + 83442489 AGATGCTTCCTATTTGCCTCACAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102543 26 + 4267968 AGATGCTTCCTATTTGCCTCACAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089097 26 - 2193130 AGATGCTTCCTATTTGCCTCACAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2125060 26 + 10377808 AGATGCTTCATATTGGCCTCACAAAA i macNem1.NW_012014910v1 C 0 I 6169 s cerAty1.NW_012006043v1 1995581 26 - 8458610 AGATGCTTCCTATTTGCCTCACAAAA i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2179794 26 + 4244037 AGATGCTTCCTATTTGCCTCACAAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202779 26 + 4569836 AGATGCTTCCTATTTGCCTCACAAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153205 26 - 159171411 AGATGCTTCCTATTTGCCTCACAAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1861195 26 + 3513951 ACGTGCTTCCTATTTGCCTCACAAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8935 26 - 4077172 AGATGCTTCCTATTTGTCTCACAAAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2714 26 - 94492 AGATGCTTCCTGTTTGTCTCGCAAAA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478434 26 + 61074082 CAATGCTTCACAGTTCCTGCACCAAA i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 545402 26 - 852752 ACATGCTTTCATTGTACCTGAAAAAG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e chlSab2.chr16 64970919 426 + 75148670 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=441759.000000 s hg38.chr17_JH159148v1_alt 39679 84 + 88070 CTCAGAAGGTTGTTTTATACCT----------------TTATGGTTTGTACAAAG---TCATACATGCCCATTGCATAGTC----CCTCAATCCCCAAAT-TTGTTTC- s panTro5.chr17 16350678 84 + 83181570 TTCAGAAGGTTGTTTTATACCT----------------TTATGGTTTGTGCAAAG---TCATACATGCCCATTGCATAGTC----CCTCAATCCCCAAAT-TTGTTTC- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255426 84 + 83442489 TTCAGAAGGTTGTTTTATACCT----------------TTATGGTTTGTGCAAAG---TCATACATGCCCATTGCATAGTC----CCTCAATCCCCAAAT-TTGTTTC- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102569 84 + 4267968 CTCAGAAGGTTGTTTTATACCT----------------TTATGGTTTGTGCAAAG---TCATACATGCCCATTGCATAGTC----CCTCAATCCCCAAAT-TTGTTTC- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089123 82 - 2193130 CTCAGAAGGTTGTTTTATACCT----------------TTATGGTTTGTGC--AG---TCATACATGCCCATTGCATAGTC----CCTCAATCCCCATAT-TTGTTTC- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1995607 100 - 8458610 CTCAGAAGGTTGTTTTATGCCTTTAGTTGGCACAGAGATTATGGTTTGTGCAAAG---GCATACATGCCCATTGCATAGTC----CCTCGATCCCCAAAT-TTGTTTC- i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2179820 100 + 4244037 CTCAGAAGGTTGTTTTATGCCTTTAGTTGGCACAGAGATTATGGTTTGTGCAAAG---GCATACATGCCCATTGCATAGTC----CCTCGATCCCCAAAT-TTGTTTC- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202805 100 + 4569836 CTCAGAAGGTTGTTTTATGCCTTTAGTTGGCACAGAGATTATGGTTTGTGCAAAG---GCATACATGCCCATTGCATAGTC----CCTCGATCCCCAAAT-TTGTTTT- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153231 100 - 159171411 CACAGAAGGTCGTTTTCTACCTTTAGTCGGCACAGAGATTATGGTTTGTGCAAAG---CCATACATGCCCACTGGATAGTC----CCTCAATCCCCAAAT-GTGTTTT- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1861221 100 + 3513951 CACAGAAGGTTGTTTTCTACCTTTAGTCTGCACAGAGATTATGGTTTGTGCAAAG---CCATACATGCCCACTGGTTAGTC----CCTCAATCCCTAAAT-TTGTTTT- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 8961 100 - 4077172 CACACAAGGTTGTTTTCTACCTTTAGTCAGCACAGAGATTATGGTTTGTGCAAAG---CCACACATGCCCATTGGATAGTC----CCTCAATCCCCAAAT-ATTTTTT- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2740 99 - 94492 CACAGAAGGTTGTTTTCCACCTTTAGTAGGCACAGAGATCACGGTTTGTGCACAG---CCATACGTG-CCAGTGGATAGTC----CCTCAGTCCCCACAT-TTGTTTT- i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478460 103 + 61074082 TGCTGGTGGTTGTGTTGTTCCCCTTGATTTTTCAGAGGTCCCAGATGAGTCCAAGTCATCATACATGCCCACTGAACGGTC----TCTCAGACCCTGATG-TCATCCT- i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 545428 99 - 852752 --CAGAAAAGTTATCCTTACTCTTTGGTGGACCAGA--TTGTAGATCGATGAAAA---TCATACATGACCA---CAAAGCTTTAATTTCAATCCTAAAGCACTGTTCTT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e chlSab2.chr16 64970919 426 + 75148670 I e macNem1.NW_012014910v1 2125086 6169 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1165170.000000 s hg38.chr17_JH159148v1_alt 39763 159 + 88070 ACTTAATTTTCCTAATAACATTTTGATTTGAGGGACAATTTGACTTAA------TGTG----GCTTAATGTATGGTCCATATTTTAGAAGGAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTATTCAGGAGAAGGAAGCCATATAAGAATATTATTTACGTGATAC s panTro5.chr17 16350762 159 + 83181570 ACTTAATTTTCCTAATAACATTTTGATTTGAGGGACAATTTGACTTAA------TGTG----GCTTAATGTATGGTCCATATTTTAGAAGAAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTGTTCAGGAGAAGGAAGCCATATAAGAATATTATTTACGTGATAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255510 159 + 83442489 ACTTAATTTTCCTAATAACATTTTGATTTGAGGGACAATTTGACTTAA------TGTG----GCTTAATGTATGGTCCATATTTTAGAAGAAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTGTTCAGGAGAAGGAAGCCATATAAGAATATTATTTACGTGATAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102653 159 + 4267968 ACTTAATTTTCCTAATAACATTTTGATTTGAGGGACAATTTCACTTAA------TGTG----GCTTAATGTATGGTCCATATTTTAGAAGGAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTATTCAGGAGAATGAAGCCATATAAGAATATTATTTACGTGATAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089205 159 - 2193130 ACTTAATTTTCCTAATAACATTTTGATTTGAGGGACAATTTGACTTAA------TGTG----GCTTGATGTATGGTCCATATTTTAGAAGGAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTATTCAGGAGAAAGAAGCCATATAAGAATATTATTTACATTATAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2131255 157 + 10377808 ACTTAATTTTCCTCATAACATTTCTATTAG-GGGACAAATTGTTTTAA------TGTG----GCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTC-ATTTACTTTGTCATTAGGTATTCAGGAGATGGAGGCCATATAAGAATTTTATTTACATGATAC i macNem1.NW_012014910v1 I 6169 C 0 s cerAty1.NW_012006043v1 1995707 159 - 8458610 ACTTAATTTTTCTAATAACATTTTGATTTGAGGGACAATTTGACTTAA------CGTG----GCTTAATGTATGGTCCATATTTTAGAAGGAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTATTCAGGAGAAGGAAGCCATATAAGAATATTATTTATGTGATAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971345 157 + 75148670 ACTTAATTTTCCTCATAACATTTCGATTAG-GGGACAAATTGTCTTAA------CGTG----GCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTC-ATTTACTTTGTCATTAGGTATTCAGGAGACAGAGGCCATATAAGAATTTTATTTACATGATAC i chlSab2.chr16 I 426 C 0 s manLeu1.NW_012106252v1 2179920 159 + 4244037 ACTTAATTTTTCTAATAACATTTTGATTTGAGGGACAATTTGACTTAA------CGTG----GCTTAATGTATGGTCCATATTTTAGAAGGAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTATTCAGGAGAAGGAAGCCATATAAGAATATTATTTATGTGATAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2202905 159 + 4569836 ACTTAATTTTTCTAATAACATTTCTATTTGAGGGACAATTTGACTTAA------CGTG----GCTTAATGTATGGTCCATATTTTAGAAGGAATAACTTAAATTCTTTTTGCTTTGTCAACAGGTATTCAGGAGAAGGAAGCCATATAAGAATATTATTTATGTGATAC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153331 158 - 159171411 ACATAATTTTCCTAATAACAATTTGATGTGAGGGACAATTTCACTTAA------TGTG----GCTTAATGTATTGTCCACATTTTAGAGGAAATAACTTAATTTCATTTTGCTTTGTCAACAGGTATTCAGGAGAAGGAAGCCATATAAGAAT-TTATTTACATGATAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1861321 158 + 3513951 ACATAATTTTCCTAATAACAGTTTGATTTGAGGGACAATTTGACTTAA------TG-G----GCTTAATGTATTGTCCATATTTTAGAGGAAATAACTTAATTTCATTTTACCTTCTCAACAGGTTTTCAGGAGAAGGAAGCCATATAAGAATATTATTTATATGATAT i saiBol1.JH378271 C 0 I 12201 s cebCap1.NW_016107543v1 9061 159 - 4077172 ACTTAATTTTCCTCATAACATTTTGATTTGAGGGACAGTTTGATTTAG------TGTT----GCTTAATATATTGTCCACATTTTAGAGGAAATAACTTAATTTCATTTTGCTTTGTCAACAAGTATTCAGGAGAAGGAAGCCGTAGAACAATATTATTTACATGATAT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2839 159 - 94492 GCTTCATTTTCCTGATAACAGTTTGATTTGAGGGACAATTTGACTTAA------TGTG----GCTTAATGTATTGTCCACATTTTAGAGGAAATAACTTAATATCATTTTGCTTTATCAACAGGTATTCAGGAGAAGGAAGCCATATAAGAATATTATTTACATGATAT i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478564 154 + 61074082 TCTTCCTTTTCTTGGGAACATGTTGATCACAACACCAATTATGTTCCA------GTTGAGGAGCACAATGT---------GTTTGGCAGAAAGTTGCCTGACAGCTCTGGACTCTGCCTAGAGGTCTTGAGCACCAGGAGGACATAGCAGAAAAGGTCTTCCATGACCC i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 545527 161 - 852752 ACTTAATTTTCTAAATAATGTTTTGATCCA---GAAGAGCTGACTTAAAATTGGTGGA----ACACAATATCTCATGTAGGTTTTGCAAGGTTTTACTTAGTTCCTTTTTA-TCTGCTAACAACTTCTCAGAAGAAAGAAGTCATATAAGAATTTGATTTGCACGAGAC i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=24565.000000 s hg38.chr17_JH159148v1_alt 39922 8 + 88070 CAGGAAAA s panTro5.chr17 16350921 8 + 83181570 CAGGAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255669 8 + 83442489 CAGGAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102812 8 + 4267968 CAGGAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089364 8 - 2193130 CAGGAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2131412 8 + 10377808 TGAGAATG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1995866 8 - 8458610 CAGGAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971502 8 + 75148670 TAAGATTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2180079 8 + 4244037 CAGGAAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203064 8 + 4569836 CAGGAAAA i colAng1.NW_012122154v1 C 0 C 0 s canFam3.chr9 21478718 8 + 61074082 CACAATGA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 545688 8 - 852752 CAAGGAGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 2998 0 - 94492 C e cebCap1.NW_016107543v1 9220 0 - 4077172 C e otoGar3.GL873537 22862060 5348 + 28711273 I e saiBol1.JH378271 1861479 12201 + 3513951 I e calJac3.chr5 46153489 0 - 159171411 C e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1627646.000000 s hg38.chr17_JH159148v1_alt 39930 258 + 88070 AAAT-----CCCCAAATGAGATCCTCTCTCATGAGGACACAATGCATTCTCAAAAT--TTTCTGATGCAGATTAATTGAATAAATAGCTGGTCAAAGACTGAGACA---AAAAGGGATCCTCACTCAGGGCAGCTATTAAATGCCGTCCCTGTTGTCATCCCATGTAGCTATTACTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----GAACAGAAATGTCGTCTGCAAATATGAGAGATTATACCTCCCA-CATTAAATAAA---- s panTro5.chr17 16350929 258 + 83181570 AAAT-----CCCCAAATGAGATCCTCTCTCATGAGGACACAATGCATTCTCAAAAT--TTTCTGATGCAGATTAGTTGAATAAATAGCTGGTCAAAGACTGAGACA---AAAAGGGATCCTCACTCAGGGCAGCTATTAAATGCCGTCCCTGTTGTCATCCCATGTAACTATTACTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----GAACAGAAATTTCGTCTGCAAATATGAGAGATTATACCTCCCA-CATTAAATAAA---- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255677 258 + 83442489 AAAT-----CCCCAAATGAGATCCTCTCTCATGAGGACACAATGCATTCTCAAAAT--TTTCTGATGCAGATTAGTTGAATAAATAGCTGGTCAAAGACTGAGACA---AAAAGGGATCCTCACTCAGGGCAGCTATTAAATGCCATCCCTGTTGTCATCCCATGTAACTATTACTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----GAACAGAAATTTCGTCTGCAAATATGAGAGATTATACCTCCCA-CATTAAATAAA---- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4102820 258 + 4267968 AAAT-----CCCCAAATGAGATTCTGTCTCATGAGGACACAATGCATTCTCAAAAT--TTTCTTATGCAGATTAATTGAATAAATAGCTGGTCAAAGACTGAGACA---AAAAGGGATCCTCACTCAGGGCAACTGTTAAATGCCGTCCCTGTTGTCATCCCATGTAGCTATTACTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----GAACAGAAATGTCATCTGCAAATATGAGAGATTATACCTCCCA-CATTAAATAAA---- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089372 258 - 2193130 AAAT-----CCCCAGATGAGACCCTCTCTCATGAGGACACAATGCATTCTCAAAAT--TTTCTGATGCAGATTAATTGAATAAATAGCTGGTCAAAGACTGAGACA---AAACGGGATCCTCACTCAGGGCAGCTATTAAATGCAGTCCCTGTTGTCATCCCATGTAGCTATTACTCACTGAGGTGTGGAAAACTAGTTTGGGA---AGACCTTTGT-----GAACAGCAATGTTATCTGCAAATATGTGAGATTATACCTCCCA-CATTAAATAAA---- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2131420 262 + 10377808 AGTCA----CTTCAGACGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTCCAATGCAGATGAATTGAATGATTGGCTAGTCAGAGGCTGAGATA---AAAAGATCCCTGCATTCAAGGCAGCCATTAAATGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAATTAATTTGGGA---ATTCTTTTGT-----GAACAAGAATATTATCTGCAAATATGAGAGATTATTCCTCTCATTGTTAAATAAA---- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1995874 259 - 8458610 AAAAT----TCCCAAATGAGATCCTCACTCATGAGGACACAATGCATACTCAAAAA--TTTCTGATGCAGATTAATTAAATGAATAGCTGGTCAACGGCTGAGACA---AAAAGGAATCCTCACTCAGGGCAGCTATTAAATGCAGTCCCTGTTGTCATACCACGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----TAACAGAAATGTTATCTGCAAATATGAGAGATTATACCTTCCA-CGTTAAATAAA---- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971510 265 + 75148670 AGTCA----CTTCAGATGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTTCAATGCAGATGAATTGAATGATTGGCTGGTCAGAGGCTGAGATA---AAAAGATCTCTGCATTCAGGGCAGCCATTAACTGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAACTAAGTTGGAAATGAAGTTTGTGT-----GAACAAAAATGTTATCTGCAAATATAAGTGATTAATCCTCTCATTGTTAAAGAAA---- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2180087 258 + 4244037 AAAT-----CCCCAAATGAGATCCTCACTCATGAGGACACAATGCATACTCAAAAA--TTTCTGATGCAGATTAATTAAATGAATAGCTGGTCAACGGCTGAGACA---AAAAGGAATCCTCACTCAGGGCAGCTATTAAATGCAGTCCCTGTTGTCATACCACGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----TAACAGAAATGTTATCTGCAAATATGAGAGATTATACCTTCCA-CGTTAAATAAA---- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203072 259 + 4569836 AAAAT----CCCCAAACGAGACCCTCACTCATGAGGACACAATACATTCTCAAAAA--TTTCTGATGCAGATTAATTAAATGAATAGCTGGTCAAAGGCTGAGACA---AAAAGGAATCATCACTCAGGGCAGCTATTAAATGCAGTCCCTGTTGTCATACCATGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTGGGA---AGATCTTTGT-----GAACAGAAATGTTATCTGTAAATATGAGAGATTATACCTCCCA-CGTTAAATAAA---- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153489 257 - 159171411 AAAT-----CCTCAGATCAGACTCTCTTTCATGGGGGCACAATGCATTCTCACAAA--TGTTTGATCCAGATTAATTGAATAAATACCTGGTCAGAGGTAGAGAGG----AAAGAGATCCACATTCAGGGGAGCTATTAAATGCAATCCCGGTTTTCATACCATGTAGCTATTACTCAGTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----GAACAGAAATGTTATCTGCAAATGTGAGAGATTATACCACCCA-TGTTCACTAAA---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1873680 262 + 3513951 AAAT-----TCTCAGATCAGACTCTCTTTC-TTGGGACAGAATGCATTCTCACAAA--TGTTTGATGCAGATTAATTGAATAAGTAGCTGGTCAGAGGCAGAGTGG---AAAAGAGAGCCACATTCAGGGGAGCTATTAAATGCAGTCCCTGTTTTCATACCATGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTTTGAACAGAACAGAAATGTTATCTGCAAATATGAGAGATTATACCGCCCA-TGTTCAATAAA---- i saiBol1.JH378271 I 12201 C 0 s cebCap1.NW_016107543v1 9220 262 - 4077172 AAAT-----CCCCAAATGAGACTCTCTTTC-ATGGGACACCATGCATTCTCACAAA--TGTTTGATGCAGATTAATTGAATAAATAGCTGGTCAGGGACGGAGAGG---AAAAGAGATCCACATTCAAGGGAGCTATTAAATGCAGTCCCTGTTTTCATACTATGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTCGGA---AGACCTTTGAGAACAGAACAGAAATGTTATCTGCAAATATGAGAGATTATACCACCCA-TGTTCAATGAA---- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 2998 257 - 94492 AAAT-----CCCCAAATGAGACTCTCTTTC-ATGGGACACAGTGCATTCTCACAAA--TGCTTGACGCAGATTAATTGAATAAATAGCTGGTCAGAGGCGGAGAGG---AAAAGAGAGCCAGATTCAGGGGAGCTATGAAATGCAGTCCCTGTTCTCATACCGTGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTGGGA---AGACCTTTGT-----GAACAGAAATGTTATCTGCAAATATGAGAGATTACACCGCCCA-TGTTCAATAAA---- i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21478726 252 + 61074082 GTGT-----GTTCAGTTGCAGCCTTTGGTTGTGAGGACACCAT--AGGCTCACCTA--TCTTTGATGCGGAAGAG-TGCATGAGGGGCTGGATGGGGCCTGAGGAAATCAAAGGGTCCCTGTGTGCACAGGAGCTCTCCGGGGCAGGGCCTGCTGCCCTCACACAGGGCTCCTGGTCGCTGAGGTTTAGGACACGAATATCT-----CTACCTTTGT--------CCCAGACATCTCTCACATGTACAGGAGAATAAA-TTTCCA-TGGTCAACGAA---- i canFam3.chr9 C 0 I 4 s dasNov3.JH570468 545696 212 - 852752 ----AGTCCCTTTAGATCACCTCCCTGTTCAT-AGGACAACACAGATTCTCAAAA---TATTTGA-GCTGATGAATTGCATCAGTGTCT----------------------------------------TCATCTACCCACTGCT-------TGATTAAACCAT--CATTACTGCTCACTTAGGTCATGGAAACTGATTTGCAA---AGACCTTTGT-----GTACCACAATATTACCTG--AATGTTTAAGGTTAGTCCTTCTC-TTTTTAAAGATGATG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22862060 5348 + 28711273 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=4416220.000000 s hg38.chr17_JH159148v1_alt 40188 622 + 88070 CTCAAGTGCATGTCTTGCTATTGCTGAGTC-T-CAATATCATTTCT-ACTT-TACCG-AGAGTTAAATGTAAGTGTTCTTGGGCAGAAAGAGAAGCTCTCACCTTGGACTAGAGTCTGTCCTTTATTAGCTACATAAAATCACACACTAAATTGttctcagctg--aaaaattgaggtaataatacataataataactctgttttcagaatcaaattggataatac-----------atataGCATGCAATATGTGTGTAAATC-TC-ATATCAGCAATTCTG-----TAAAATAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAATATATAGGTAAGA----------ATCCCTGCTACTAGGGACATAGCCCAAAGTTACAATGAAAAGAAGAAAGAAGGGTAAAAGAAACATGAGGACAAAATTGAAAACAAAAATATGATTGCAAAGATT-----------ATTGATCAGTTGCAGAAA------------------------------CCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTCTTGACTTTAGAGTCG-AATGGAGACCATGTCTCCACATTGAGAACACATGAAGCTGGCACATGATCCACAAAGTGTAAGGAAAAA-AGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCTGATTCCCAAGATTTTAAACA s panTro5.chr17 16351187 617 + 83181570 CTCAAGTGCATGTCTTGCTATTGCTGAGTC-T-CAATATCATTTCT-ACTT-TACCG-AGAGTTAAATGTAAGTGTTCTTGGGCAGAAAGAGAAGCTCTCACCTTGGACTAGAGTCTGTCCTTTATTAGCTACATAAAATCACACATTAAATTGttctcagctg--aaaaattgtggtaataatacataataata----tgttttcagaatcaaattggataatac-----------atatagcgtgcAATAT-TGTGTAAATC-TC-ATATCAGCAATTCTG-----TAAAATAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAATATATAGATAAGA----------ATCCCTGCTACTAGGGACATAGCCCAAAGTTACAATGAAAAGAAGAAAGAAGGGTAAAAGAAACATGAGGACAAAATTGAAAACAAAAATATGATTGCAAAGATT-----------ATTGATCAGTTGCAGAAA------------------------------CCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTCTTGACTTTAGAGTCA-AATGGAGACCATGACTCCACATTGAGAACACATGAAGCTGGCACATGATCCACAAAGTGTAAGGAAAAA-AGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCTGATTCCCAAGATTTTAAACA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16255935 618 + 83442489 CTCAAGTGCATGTCTTGCTATTGCTGAGTC-T-CAATATCATTTCT-ACTT-TACCG-AGAGTTAAATGTAAGTGTTCTTGGGCAGAAAGAGAAGCTCTCACCTTGGACTAGAGTCTGTCCTTTATTAGCTACATAAAATCACACATTAAATTGTTCTCAGCTG--AAAAATTGTGGTAATAATACATAATAACA----TGTTTTCAGAATCAAATTGGATAATAC-----------ATATAGCATGCAATATGTGTGTAAATC-TC-ATATCAGCAATTCTG-----TAAAATAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAATATATAGGTAAGA----------ATCCCTGCTACTAGGGACATAGCCCAAAGTTACAATGAAAAGAAGAAAGAAGGGTAAAAGAAACGTGAGGACAAAATTGAAAACAAAAATATGATTGCAAAGATT-----------ATTGATCAGTTGAAGAAA------------------------------CCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTCTTGACTTTAGAGTCA-AATGGAGACCATGACTCCACATTGAGAACACATGAAGCTGGCACATTATCCACAAAGTGTAAGGAAAAA-AGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCTGATTCCCAAGATTTTAAACA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103078 622 + 4267968 CTCAAGTGCATGTCTTGCTATTGCTGAGTC-T-CAATATCATTTCT-ACTT-TACCG-AGAGTTAAATGTAAGTGTTCTTGGGCAGAAAGAGAAGCTCTCACCTTGGACTAGAGTCTGTCCTTTATTAGCTACATAAAATCACACACTAAATTGTTCTCAGTTG--AAAAATTGAGGtaataatacataataataatTCTGTTTTCAGAATCAAATTGGATAATAC-----------ATATAGCATGCAATATGTGTGTAAATC-TC-ATATCAGCAATTCTG-----TAAAATAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAATATATAGGTAAGA----------ATCCCTGCTACTAGGGACATAGCCCAAAGTTACAATGAAAAGAAGAAAGAAGGGTAAAAGAACCATGAGGACAAAATTGAAAACAAAAATATGATTGCAAAGATT-----------ATTGATCAGTTGCAGAAA------------------------------CCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTCTTGACTTTAGAGTCA-AATGGAGACCATGACTCCACATTGAGAACACGTGAAGCTGGCACATGATCCACAAAGTGTAAGGAAAAA-AGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCTGATTCCCAAGATTTTAAACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2089630 620 - 2193130 CTCAAGTGCATGTCTTGCTATTGCTGAGTC-T-CAATATCATTTCT-ACTT-TACT---GAGTTAAATGTAAGTGTTCCTGGGTGGAAAGAGAAGCTCTCACCTTGGACCAGAGTCTGTCCTTTATTAGCTACATAAAATCACACATTAAATTGTTCTCAGCTG--AAAAATTGAGGtaataatacataataataattctgttttcagaatcaaattggataatac-----------ataTAGCATGCAATATGTGTGAAAATC-CC-TTATCAGCAATTATG-----TAAAATAAAACACCATATGAGATGAAGGACGGTTCAGAATTTATTCAGAAACATATAGGTAAGA----------ATCCCTGCTACTAGGGACATAGACCAGAGTTACCATGAAAAGAACAAAGAAGGGTAAAAGAACCATGAGGACAAAATTGAAAACAAAAATATGATTGCAAAGATT-----------ATTGATCAGTTGCAGAAA------------------------------CCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTCTTGACTTTAGAGTCA-AATGGAGACCATGACTCCCCATTGAGAACATATGAAGCTGGCACATGATCCACGAAGTGTAAGGAAAAA-AGAATCAGGATGAAGTATTCTGCCCTCTCTCAAGCTGATTCACAAGATTTTAAACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2131682 623 + 10377808 CTCAAGTGCATGTCTTGCTATTGCTGACTT-C-CAATGTCA-TTCC-ACTA-TATTG-AGAATTAAATGTAAGTGTCCTTGGCCAGAAAGAgaggacctcagcttggatcagaatctgtcccttattagctacataacatcgcatattaaatttttttcaggtg--aaaaatgaaggcaataatagatgaccatc----tgttttgagaatcaaattggataatac-----------ctatggtatgtgatacgtatgtaaaTC-CC-ATATCAGGAATGCTTTCAAATAAAACAAAACACCATATGAGATGAA-GATGGTTCAGAGTTTATTCAGAAACATAGAGTTAAGA----------ATCTCTGCTACCAGGAACACAACCCAAAGTTATCATGAAAAGAAGAAAGAAGGATAGAAGAACCATGAAGAGGATATTGAAAACAAATATATGATTGCAAGGATT-----------ATTGCTCAGTTGCAGAAG------------------------------CCTA-------------AATTC------------CTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAGCTGAGACCATGACTCCAAATTGAGAGCACACGAAGCTGGCACATGATCCACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCATCTAGCAGATTCCCAAGATTTTAAACA i macNem1.NW_012014910v1 C 0 I 190 s cerAty1.NW_012006043v1 1996133 623 - 8458610 CTTAAGTGCATGTCTTACTCTTGCTGAGTC-C-CAATATCATTTCT-ACTT-TACTG-AGAGTTAAATGTAAATGTTCTTGGGCAGAAAGAGAAGCTCTCACCTTGGACCAGAGTCTGTCCTTTATTAGCTACATAAAATCACACATTAAATTGttctcagctg--aaaaattgaggtaataatacatgactgtc----tgttttcagaatcaaattggataatac-----------atataGTATGCAATATGCGTGTAAATC-CC-ATATCAACAATTCGGTAAAATAAAACAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAACGTATAGGTAAGA----------ATCCCTGCTACTAGGGACATAGCCCAAAGTTACCGTGAAAAGAAGAAAGAAGGGTAAAAGAACCACGAGGACAAAATTGAAAAGGAAAATATGATTGTAAAGATT-----------ATTGATCATTTGCAGAAA------------------------------TCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTTTTGACTTTAGAGTCA-AATGGGGACCATGACTCCACACTGAGAACACATGAAGCTGGCACATGATCCACCAGGTGTAAGGAAAAA-AGAATCAGGGTGAAGTATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971775 621 + 75148670 CTCAAGTGCATGTCTTGCTAGTGTTGACTT-C-CAATGTCATTTCT-ACTA-TATTG-AGAGTTAAATGTAAGTGTCCTTGGACAGAAAGAGAGGACCTCAGCTTGGATCAGAATCTGTCCTTTATTAGCTACATAACATCACACATTAAATTTTTTTCAGGTG--AAAAATGAAGGTAATAATAGATGACCATC----TGTTTTGAGAATCAAATTGGATAATAA-----------TTATGGTATGTGATACGTATGTAAATC-CT-ATATCAGAAATGCTTTCAAATAAAACAAAACACCATATGAGATGAA-GATGGTTCAGAGTTTATTCAGAAACATATAGTTAAGA----------ATCTCTGCTACCAGGAACACAACCC--AGTTATCATGAAAAGAAGAAAGAAGGATAGAAGAACCATGAAGAGGATATTGAAAACAAATATATGATTGCAAAGATT-----------ATTGCTCAGTTGCAGAAG------------------------------CCTA-------------AATTC------------CTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAGCTGAGACCGTGACTCCAGATTGAGAGCACACGAAGCTGGCACATGATCCACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCGTCTAGCAGATTC-CAAGATTTTAAACA i chlSab2.chr16 C 0 T 26370 s manLeu1.NW_012106252v1 2180345 623 + 4244037 CTTAAGTGCATGTCTTACTCTTGCTGAGTC-C-CTATATCATTTCT-ACTT-TACTG-AGAGTTAAATGTAAATGTTCTTGGGCAGAAAGAGAAGCTCTCACCTTGGACCAGAGTCTGTCCTTTATTAGCTACATAAAATCACACATTAAATTGttctcagctg--aaaaattgaggtaataatacatgactgtc----tgttttcagaatcaaattggataatac-----------atataGTATGCAATATGTGTGTAAATC-CC-ATATCAACAATTCTGTAAAATAAAACAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAACATACAGGTAAGA----------ATCCCTGCTACTAGGGACACAGCCCAAAGTTACCATGAAAAGAAGAAAGAAGGGTAAAAGAACCATGAGGACAAAATTGAAAACAAAAATATGATTGTAAAGATT-----------ATTGATCATTTGCAGAAA------------------------------TCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTTTTGACTTTAGAATCA-AATGGGGACCATGACTCCACACTGAGAACACATGAAGCTGGCACATGATCCACAAGGTGTAAGGAAAAAG-GAATCAGGGTGAAGTATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203331 635 + 4569836 CTTAAGTGCATGTCTTGCTCTTGCTGACTC-C-CGATATCATTTCT-ACTT-TACTG-AGAGTTAAATGTAAATGTTCTTGGGTGGAAAGAGAAGCTCTCCCCTTGGACCAGAGTCTGTCCTTTATTAGCTACGTAAAATCACACATTAAATTGttctcagctg--aaaaattgaggtaataatacatgactgtc----tgttttcagaatcaaattggataatacatataGTACATATATAGTATGCAATATGCATGTAAATC-CC-ATATCAACAATTCTGCACAATAAAACAAAACACCATATGAGATGAAGGATGGTTCAGAATTTATTCAGAAACATATAGGTAAGA----------ATTCCTGCTACTAGGGACATAGCCCAAAGTTACCATGAAAAGAAGAAAGAAGGGTAAAAGAACCATGAGCACAAAATTGAAAATGAAAATATGATTGTAAAGGTT-----------GTTGATCACTTGCAGATA------------------------------CCTA-------------AGTTT------------CTTAGAAGGAGAGAATGAAGCTCTTGACTTTAGAGTCA-AATGGAGACCACGACCCCACATTGAGAACACATGAAGCTGGCACATGATCCACAAGGTGTAGGGAAAAAAAGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46153746 633 - 159171411 CTC-AGTGCATGTCTTGCTCTTACTGAATC-C-CAGTATCATTTCT-ACTG-AACTG-AGAGTTAAATAGGAGGGTTCTTGGGTAGAAAGAGAAGATCTCACCTTGGACCCGAGTCTGTCCTTTATTAGCTACATCAAATCACACAATAAATTGTTCTCAGCTG--AAAAATTGAGGCAATTACACATGAGCATC----TGTTTTCAGAATCAAATTGGATGTTAC-----------ATATAGCATGTGACATGTGTGTAGATC-AT-TTATCAGGAATTCTGTAGAATAAAACAAAACACCATATGAGATGGAGGATGGTTCATAATTTATTTAGTAACACATAGGTAAGA----------ATCTGTGCTACAAGGGACATAGTCCAGAGTTGTCATAAATAGGAGAAAGAAGGGC--AAAAACCATGAGGAGAAAATTGAAAATGAAAATACAATTGCAAAGATTCAGTTGATCAAAAGGATCAATTACAGAAA------------------------------CGCA-------------AATTT------------CTGAGAAGCAGAGAATGAAGCTCTTGAAGTTAGACTCAAAGCTGAGACCAGGACTCCAAACTGAGGACACAGGAAGCTGGCACATGATCCACAAAGTGTCAGGAGAAAGAGAATCAGGACGAAGTACTCTGCCCTCCCTCAAGCTGAATCACAAGATTTTAAACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1873942 596 + 3513951 CTC-AGTGCTTGTCTTTTTCTTACTGAATC-C-CAATATCATTTCT-ACTT-TACTG-AGAATTAAATCGGAGTGTTGTTGGGCAGAAAGAGAGGATCTCACCTTGGACCTGAGTCTGTCCTTTATTAGCTACATCAGAGCACACAATAAATTGTTCTCGGCTG--AATAATTGAGGCAATAACACATGAGCATC----TGTTTTCAGAATCAAGTTGCATATTAC-----------ATATAGGATGCAATATGTGTGTAAATC-CC-TTAGC---AATTCTGTAGAATAAAACAAAACACCATATGAGATGGAGGATGGTTCAGAATTTATTGAGAAACATATTGGTAAGA----------ATCTGTGCTATAAGGGACTTAGCCCAGAGTTATTGTAAAAAGTAGAAAGGAGGGTA-AAAAACCATGAGGAGGAAATTGAAAATGAAAATATGATTGCAAAGATT-----------ATGGATACGTTGCAGAAA------------------------------TCTA-------------AATTT------------CTGTGAAACAGAGAATGAAGCTCTTGACTTTAGAGTCAAAGCTGAGAT-----------------------GGCAGCTGGCACATAATTCCCAAAATGTAAGGAG-AAGAGAACCAGGACGAAGTACTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 9482 621 - 4077172 CTC-AGTGCATGTCTTGCTCTTACTGAATC-C-CAATATCATTTCT-ACTT-TACTG-AGAGTTAAATAGGGGTGTTCTTGGGTGGAAAGAGAAGATCGAACTTTGGACCTGAGTCTGTCCTTTATTAGCTACATCAAATCACACATTAAATTGTTCTCAGCTG--AAAAATTGAGGTAATAACACATGAGCATC----TGTTTTCAGAATCAAATTGGATGTTAC-----------GTATAGCATGCAATATGTGTGTAAATT-CC-ATAGCAGCAATTCTGTAGAATAAAACAAAGCACCATATGAGATGGAGGATGGTTCAGAATTTATTTAGTCACACATAGGTAAGA----------ATATGTGCTACGAAGGGCATAGTCCATAGTTATCATAAAAAGAAGAAAAAAGGGTA-AAAAACTCTGAGGAGGAAATTGAAAATGAAAATATGATTCTGAGGATT-----------ATGGATCAGTTGAAGAAA------------------------------TCTA-------------AATTT------------CTGAGAAGCAGAGAATGAAGCTTTTGTCTTTAGAGTCAAGGCTGAGACCATGACTCC-AACTGAGGACATAGGAAGCTGGACCATGATCCCCAAAGTGTAAGAAG-AAGAGAATCAGGACAAAGTACTCTGCCCTCCCTCAACCTGATTTACGAGATTTTAAACA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 3255 623 - 94492 CTC-AGTGCATGTCTTGCTCTTACTGAATC-C-CAACATCATTTCT-ACTT-TACTG-AGAGTCAAATAGGAGTGTTCTTGGGCAGTAAGAGAAGATCTCACCTTGGACCCGAGTCTGTCCTTTATTAGCTACATCAAATCACACATTAAATTGTTGTCAGCTG--AAAAATTGAGGTAATAACACATGAGCATC----TGTTTTCAGAATCAAATTGGATATTAC-----------GTATAGCATGCAATATGTGTGAAGATC-TT-TCATCAGGAATTCTGTAGAATAAGACAAAACACCATACGAGATGGAGGATGGTTCAGAATTTATTCAGAAACGTATAGGTAAGT----------ATCCCTGCTATGAGGGACGTAGTCCAGAGTTATCATAAGAAGAAGAAAGAAGGGTA-AGAAACCATCAGGAGGAAATTGAAAATGAAAGTATGATTGCATAGATT-----------ATGGATCAGTTGCAGAAA------------------------------TCCA-------------AATTT------------CTGAGAAGCAGAGAATGAAGCTCTTGACTTTAGAGTGAAGGCTGAGACCATGACTCCAAATTGAGGACACATGAAACTGGCACATGATCCCCAAAGTGTAAGGAGAAAGAGAATCAGGAAGAAGTACTCTGCCCTCCCTCAACCTGATTCACAAGATTTTGAACA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867408 629 + 28711273 CTCAAGTGCACAGCTCACCAGTTCTCATTCTC-CAGTAGCAGTTCT-AGTTGCTTTG-AGATGGACATGCAGGTGCCCTTGAGCAGACACCGCAGACCCAGTCCTGGATGTCAGTGTGACTATTATTCACTACAAGACATTATGCTATGAAGTTTTCTCATCTGAAAAAAATGATATTAACAATACAAGGGTAAC----TGTATTGAAAAGAAAAATGGATAATAT-----------ATATGGCATGCCATACGTATACAAGTTGCT-GTATCAGAAA-GAAGTACAATGGAACAAAACACAACACGAGATGAATAAAGGCTCACAATTTATTAAGAAATACTTAGATAAGA----------ATGTTTG------------------------ATGATAAAAAGAAGAAAAAAGGATATTAAAAATGTGAGT---CAATTCAAAAAGAAAGCTTGATTATGATAATG-----------ATTGGTCAATATCAGAAACC-ATGAAAAGA--TGAGAGGGTTTGTTTTCCTA-------------AGTTA------------CTTAGAGGGAGAGAGTGAAGGTCTTGATATTACAGTCAAAGCCAAGACTGTAACTCCAAAGCAAGAATACAAGAAGCTGGCATGTGATCCCTTAGGGATGAGGAAGAAGAGAATCAGGAAGAAGTACTCTGCACTTGCTCCACCTGATTCACAAAGATGTAAAGA i otoGar3.GL873537 I 5348 C 0 s canFam3.chr9 21478982 640 + 61074082 CTCCACCCAGAAGCTTGCTGGAGCTCAGGC-C-CAGGGTGTTTCCTAACTG-GTCTGCAGATGGGAATGTGAGTGCCCTTTAGCCAGGGCAGAAGATGCAGCCTGGCATCCGATTCTGTCCCTT-TCAGCTCTGTGACATAACATTATAGGATCTCCTCACCTG---CAAATGGAGATACAAATTTGTGGGGGAC----TATA-GGAGACTCCAAATGGATAATGC-----------ACATAGTATGGGACCC-TGTGCATACA-TT-TTGTCATGAATGTTGAACAAGGACATGGA-CACCATATGGGATGCAGAATGGTACAGGGTTTATTAAGAGA--TATAGGTGAGACCCTCCCCCCACCACTGCATGGAGGGAGGCCTTTGAAAGGT-TCATGCAAGGATGAAAAGAGGATACAAGGACTGTGAGGAA-----TGGAATAGAAAACTTGATCCTAAA---C-----------TTTCATTAGTGTCAGATA------------------------------CTTATCTATGATGCATGAATTTTTTTCTCTACACCTTAGTGGGATGGAAGTGAGATCTGCACTGTGTTGTAT-TGCAGATATGATGAATCCATA-TAACTATATAGGAAGCTGGCACATGATTTACAGA----CAGAAAGAACAGACTCAGTGAGAAGGGACATATATTTCATAAAGGTACTTCACATTCTTTGGAATA i canFam3.chr9 I 4 C 0 s dasNov3.JH570468 545908 582 - 852752 TTCAATAGTGCATCTTGCTAACTCTCGATC-TGCAGCACCATTTCT-ACTTACACTG-AGATGGAAGTGTAAGAAACCTCCACCAGAGCCAGAAGACCCAGTTCTGGATCTGAGTTTGGGCATTTTTACATACATGACTTTACACAAGTGAATTTTCT-AGGTG--AT-------------------------------TATTATGAGGCAGAGAACAGATAATGC-----------CTATGG-----GATATGTATATAAATC-CCTATATCAGGAAGTCTGTACAACAAAAGGGAA----ACATGATAT-AATGATG----AGAGTTTATTGAGAGG----GAGGCAAGT----------------------------------CAAAGTGATCATAAAAAGAAGAGATCAGAACA-GAGAATCATGGATATA----TAAAATTTAAAATATGATTATGAAGATT-----------AAGGATCAAATAAAAAAACCAATGAAAAGAGTTAGGAGCACTTGTTTGCTTA-------------AGTTC------------CATGGAAGTAGTGGGTGAATTTCTTGACGTCAGAGTAAGAGCTGAGGCCATTCAGTCATGTCATGAATATAAGAAG-TAAAACATAAACCAGAAGATATAAGGAAGAAGGTAATTAGAGTGAAATATTCTGCACCTCAGCCAGCTCATTAACAAGCTTTTTAACA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=41457.000000 s hg38.chr17_JH159148v1_alt 40810 8 + 88070 GGCAAAGA s panTro5.chr17 16351804 8 + 83181570 TGCAAAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256553 8 + 83442489 TGCAAAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103700 8 + 4267968 TGCAAAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090250 8 - 2193130 TGCGACAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1996756 8 - 8458610 TGCAAAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946026 8 + 75148670 TGCAGAGA i chlSab2.chr16 T 26370 I 69 s manLeu1.NW_012106252v1 2180968 8 + 4244037 TGCAAAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203966 8 + 4569836 CGCAAAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154379 8 - 159171411 TGCAAAAA i calJac3.chr5 C 0 I 15 s saiBol1.JH378271 1874538 8 + 3513951 TGCAGCaa i saiBol1.JH378271 C 0 I 13 s cebCap1.NW_016107543v1 10103 8 - 4077172 TGCAGAAA i cebCap1.NW_016107543v1 C 0 I 2 s aotNan1.NW_018505111v1 3878 8 - 94492 TGCAGAAA i aotNan1.NW_018505111v1 C 0 I 4 s otoGar3.GL873537 22868037 6 + 28711273 --TATAGA i otoGar3.GL873537 C 0 I 2 s canFam3.chr9 21479622 7 + 61074082 -GCCTAAT i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 546490 8 - 852752 TGCAGATG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=243035.000000 s hg38.chr17_JH159148v1_alt 40818 60 + 88070 AAT-AAAAA----AAAT--TGGTGAAAGCATACTGTGTA-TCAGTAAAGT-TTGAAAGTAAATCTGTCT s panTro5.chr17 16351812 60 + 83181570 AAT-AAAAA----AAAT--TGGTGAAAGCATACTGTGTA-TCAGTAAAGT-TTGAAAGTAAATTTATCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256561 59 + 83442489 AAT--AAAA----AAAT--TGGTGAAAGCATACTGTGTA-TCAGTAAAGT-TTGAAAGTAAATTTATCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103708 61 + 4267968 AATAAAAAA----AAAT--TGGTGAAAGCATACTGTGTA-TCAGTAAATT-TTGAAAGTAAATTTGTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090258 60 - 2193130 AAT-AAAAA----ACAT--TCGTGAAAGCATACTGTGTA-TCAGTAAAGT-TTGAAAGTAAATTTGTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1996764 61 - 8458610 AATAAAAAA----AAAT--TGGTGAAAGCATACTGTGTG-TCAGTAAAGT-TTGAAAGTAAATTTGTCT i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2180976 61 + 4244037 AATAAAAAA----AAAT--TGGTGAAAGCATACTGTGTG-TCAGTAAAGT-TTGAAAGTCAATTTGTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2203974 61 + 4569836 AAT-TAAAA----AAAT--TGGTGAAAGCATACTGTGTGTTCAATAAAGT-TTGAAAATAAATTTGTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154402 49 - 159171411 AAA-AAAAG----ATAT--TGGTGAGAGCATTCTGTGTT-------------GGAAAGTAAATTTGTCC i calJac3.chr5 I 15 C 0 s saiBol1.JH378271 1874559 49 + 3513951 aaa-aaaag----aaaT--TGGTGAGAGCATACTGTGTT-------------TGAAAGCAAATTTGTCC i saiBol1.JH378271 I 13 C 0 s cebCap1.NW_016107543v1 10113 49 - 4077172 AAA-AAAAG----ATAC--TGGTGAGAGCATACTGTGTT-------------TGAAAGCAAATTTGTCC i cebCap1.NW_016107543v1 I 2 C 0 s aotNan1.NW_018505111v1 3890 49 - 94492 AAA-AAAAG----AAAT--TGGTGACAGCATACTGTGTT-------------TGAAAGTAAATTTGTCC i aotNan1.NW_018505111v1 I 4 C 0 s otoGar3.GL873537 22868045 62 + 28711273 AAT-AATAG----AAATTATGGTTAAAGCATACTGGCCT-TCAGAAAAGT-TTAGAAGAGATTTTGTCC i otoGar3.GL873537 I 2 C 0 s canFam3.chr9 21479630 48 + 61074082 AGT-CTTAA----ACAT-------------TACAGTG-A-TTGGAAATGG-GTGATGGCAAACATTTTT i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 546498 62 - 852752 ----AATAACTCCATTT--TGTTGAGAGCATGCTGGGTG-TCAGTAAAGTCTAGGAAGTAATTTTGTCC i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e chlSab2.chr16 64946034 69 + 75148670 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=2881.000000 s hg38.chr17_JH159148v1_alt 40878 1 + 88070 T s panTro5.chr17 16351872 1 + 83181570 T i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256620 1 + 83442489 T i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103769 1 + 4267968 T i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090318 1 - 2193130 T i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1996825 1 - 8458610 T i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2181037 1 + 4244037 T i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204035 1 + 4569836 T i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154451 1 - 159171411 C i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874608 1 + 3513951 C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10162 1 - 4077172 C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 3939 1 - 94492 C i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21479678 1 + 61074082 T i canFam3.chr9 C 0 I 65 s dasNov3.JH570468 546560 1 - 852752 C i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e otoGar3.GL873537 22868107 0 + 28711273 C e chlSab2.chr16 64946034 69 + 75148670 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=107336.000000 s hg38.chr17_JH159148v1_alt 40879 20 + 88070 CTGAAAGATAAGTGAGTTGG s panTro5.chr17 16351873 20 + 83181570 CTGAAAGATAAGTGAGTTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256621 20 + 83442489 CTGAAAGATAAGTGAGTTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103770 20 + 4267968 CTGAAAGATAAGTGAGTTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090319 20 - 2193130 CTGAAAGTTAAGTGAGTTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1996826 20 - 8458610 CTGAAAGATAAGTGAGTTGG i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2181038 20 + 4244037 CTGAAAGATAAGTGAGTTGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204036 20 + 4569836 CTGAAATATAAGTGAGTTGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154452 20 - 159171411 CTGAAAGATAAGTAAGTTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874609 19 + 3513951 CTGAAAGATAAGTTAGTAG- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10163 20 - 4077172 CTGAGAGATAAGTTAGTTGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 3940 20 - 94492 CTGAAAGATAACTTAGTTGG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 546561 20 - 852752 AGGAAAGTTGGGTCAGTTGA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21479679 65 + 61074082 I e otoGar3.GL873537 22868107 0 + 28711273 C e chlSab2.chr16 64946034 69 + 75148670 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=997815.000000 s hg38.chr17_JH159148v1_alt 40899 207 + 88070 GTctgggtgtggtagctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgagggcaggagttccagacaagtctgatcaacatggtgaaaactactaaaaatactaaaaatacaaaaaattagccaggcgtggtggcacaggcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaa s panTro5.chr17 16351893 205 + 83181570 ggctgggtgtggtagctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgagggcaggagttccagacaaatctgatcaacatggtgaaaac--ctgtctctactaaaaatacaaaaaattagccaggcgtggtggcacaggcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256641 205 + 83442489 ggctgggtgtggtagctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgagggcaggagttccagacaaatctgatcaacatggtgaaaac--ctgtctctactaaaaatacaaaaaattagccaggcgtggtggcacaggcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103790 205 + 4267968 ggctgggtgtggtagctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgagggcaggagttccagacaagtctgatcaacatggtgaaaac--ctgtctctactaaaaatacaaaaaattagccaggcgtggtggcacaggcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090339 205 - 2193130 ggccgggtgtggtggctcacacctgtaatcccagcactttgggaggctgagagaggtggatcacttgagatcaggagctccagacaagcctgatcaacatggtgaaacc--ctgtctctactaaaaatacaaaaaattagccaggtatggtggcacaggcatgtaatcccagctactcaggaggctgaggcaggagaatcacttgaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1996846 205 - 8458610 ggctgggcgtggtggctcatacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttccagaccaccctgatcaacatggtgaagct--ctgtctctactaaaaatacaaaaaattagccaggcgtggtggcacaggcatgtaatcccagctactaaagaggctgaggcaggagaatcgcttgaa i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2181058 205 + 4244037 ggctgggcgtggtggctcatacctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagttccagaccaccctgatcaacatggtgaagct--ctgtctctactaaaaatacaaaaaattagccaggcgtggtggcacaggcatgtaatcccagctactaaagaggccgaggcaggagaatcgcttgaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204056 205 + 4569836 ggctgggcgtggtggctcatacctgtaatcccagcactttgggaggttgaggcaggtggatcacttgaggtcaggagttccagcccaccctgatcaagatgatgaaact--ctgtctctactaaaaatacaaaaatgtagccaggcgtggtggcacaggcatgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaa i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154472 203 - 159171411 ggttgggcacggtggctcacgcctataatcccaatattttggggggttgaggtgggtggatcacttgaggtcaggcatttgagaccagcctgatcaacatggtgaaact--ccatgtctactaaaaat--aaaaaattagtcaggcgtggtggaataggcctgtaatcccagctagttgggaggctgaggcaggagagttggttgat i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874628 205 + 3513951 ggccgggcagggtggctcacacctctaatcccagtattttggggggttgaagtgggtgaatcacttgagatcaggtgtttgagaccagcctgatcaacatggtgaaaat--ccatctttactaaaaatacaaaaaattagccaggcatggtggaacagacctgtcatcccagctagttgggaggttgaggcaggagaattggttgaa i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10183 204 - 4077172 Agccgggctgggtggctca-aactgtaatcccaatattttgcagggctcagctgggtaaatcacttgaggtcaggtgtttgagaccagcctgatcaacatggtgaaact--ccgtctatactaaaaatacaaaaaattagccaggcatggtggaacaggtctgtaatcccagctagttgcgaggctgaggcaggagaattggttgaa i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 3960 205 - 94492 ggctgggcagggtgactcacgcctgtaatcccaatattctgggtggctcaggttggtgaatgacttgaggtcaggtgtttgagaccagcctgattaacatggtgaaact--ctgtctctactaaaaatagaaaaaattggccagtcgtggtggaacaggcctgtaatcccagctagttgggaggctgaggcaggataattggttgaa i aotNan1.NW_018505111v1 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21479679 65 + 61074082 I e dasNov3.JH570468 546581 0 - 852752 C e otoGar3.GL873537 22868107 0 + 28711273 C e chlSab2.chr16 64946034 69 + 75148670 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=287792.000000 s hg38.chr17_JH159148v1_alt 41106 70 + 88070 cccagaagatggaggttgcagcgagccgagagcgtgctactgcactccagcctgggtg--acagtgaggctc s panTro5.chr17 16352098 70 + 83181570 cccaggagatggaggttgcagcgagccgagagcgtgctactgcactccagcctgggtg--acagcgaggctc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256846 70 + 83442489 cccaggagatggaggttgcagtgagctgagagcgtgctactgtactccagcctgggtg--acagcgaggctc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4103995 70 + 4267968 cccaggagatggaggttgcagcgagccgagagcgtgctactgcactccagcctgggtg--acagcgaggctc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090544 70 - 2193130 cccaggagacagaggttgcagtgagccgagagcgtgctactgcactccagcctgggtg--acagcgaggctc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997051 72 - 8458610 cctgggatgcagaggctgcattgagccgagagtgtgctacagcactccagcctgggcgacacagcaaggctc i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2181263 72 + 4244037 cctgggatgcagaggctgcattgagccgagagtgtgctacagcactccagcctgggcgacacagcaaggctc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204261 72 + 4569836 cctcggaggtagaggctgcagtgagccaagagtgtgctaccgctctccagcctgggcaacacagcaaggctc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154675 72 - 159171411 cctgggaggcaaaggttacagtgagctaaaatcatgctactgtactccagcctgggtgatagagtgagaatc i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874833 72 + 3513951 cctgggaggcagaggttacagtgagccaaaatcaagctactgcactccagcctgggtgacaaagtgagactc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10387 72 - 4077172 cctgggagacagaggttacagtgagccaagatcacgctactgtactccaccctgggtgacagagtgagactc i cebCap1.NW_016107543v1 C 0 I 23 s aotNan1.NW_018505111v1 4165 72 - 94492 cctgggaggcagaggttacagtgagccaagatcacgctattgcactccagcctgggtgacagagtgagaata i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868107 10 + 28711273 CCCATAAGAT-------------------------------------------------------------- i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21479679 65 + 61074082 I e dasNov3.JH570468 546581 0 - 852752 C e chlSab2.chr16 64946034 69 + 75148670 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=35423.000000 s hg38.chr17_JH159148v1_alt 41176 20 + 88070 cgtctca-----aaagaaaaaaaaG s panTro5.chr17 16352168 20 + 83181570 cgtctca-----aaagaaaaaaaaa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256916 20 + 83442489 cgtctca-----aaagaaaaaaaaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104065 20 + 4267968 cgtctca-----aaagaaaaaaaaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090614 20 - 2193130 tgtctca-----aaagaaaaaaaaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997123 18 - 8458610 catctca-----aaagaaaaaaa-- i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2181335 18 + 4244037 catctca-----aaagaaaaaaa-- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204333 18 + 4569836 catctca-----aaagaaaaaaa-- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154747 15 - 159171411 tgtctca------aaaaaaaa---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874905 16 + 3513951 tgtctca-----gaaaagaaa---- i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018505111v1 4237 21 - 94492 tgtttcaaaaaaaaaaaaaaa---- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868117 2 + 28711273 -------------------AA---- i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e cebCap1.NW_016107543v1 10459 23 - 4077172 I e canFam3.chr9 21479679 65 + 61074082 I e dasNov3.JH570468 546581 0 - 852752 C e chlSab2.chr16 64946034 69 + 75148670 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=27885.000000 s hg38.chr17_JH159148v1_alt 41196 10 + 88070 GTCAGTTGAG s panTro5.chr17 16352188 10 + 83181570 GTCAGTTGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256936 10 + 83442489 GTCAGTTGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104085 10 + 4267968 GTCAGTTGAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090634 10 - 2193130 GTCAGTTGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997141 10 - 8458610 GTCAGTTGGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946103 10 + 75148670 GTCAGTTGAG i chlSab2.chr16 I 69 C 0 s manLeu1.NW_012106252v1 2181353 10 + 4244037 GTCAGTTGGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204351 10 + 4569836 GTCAGTTGGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154762 6 - 159171411 GTGAGA---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874921 6 + 3513951 GTCAGA---- i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018505111v1 4258 6 - 94492 GTGAGA---- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868119 10 + 28711273 GTCATTTGAT i otoGar3.GL873537 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e cebCap1.NW_016107543v1 10459 23 - 4077172 I e canFam3.chr9 21479679 65 + 61074082 I e dasNov3.JH570468 546581 0 - 852752 C e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=9236.000000 s hg38.chr17_JH159148v1_alt 41206 4 + 88070 CAGA s panTro5.chr17 16352198 4 + 83181570 CAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256946 4 + 83442489 CAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104095 4 + 4267968 TAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090644 4 - 2193130 CAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997151 4 - 8458610 CAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946113 4 + 75148670 CAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181363 4 + 4244037 CAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204361 4 + 4569836 CAGA i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22868129 3 + 28711273 AAA- i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 546581 4 - 852752 CAGT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e aotNan1.NW_018505111v1 4264 0 - 94492 C e cebCap1.NW_016107543v1 10459 23 - 4077172 I e canFam3.chr9 21479679 65 + 61074082 I e saiBol1.JH378271 1874927 0 + 3513951 C e calJac3.chr5 46154768 0 - 159171411 C e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=91739.000000 s hg38.chr17_JH159148v1_alt 41210 13 + 88070 AGGTTGTTGTGTG s panTro5.chr17 16352202 13 + 83181570 AGGTTGTTGTGTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256950 13 + 83442489 AGGTTGTTGTGTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104099 13 + 4267968 AGGTTGTTGTGTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090648 13 - 2193130 AGGTCGTTTTGTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997155 13 - 8458610 AGATTGTTGTGTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946117 13 + 75148670 AAGTTGTTGTGAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181367 13 + 4244037 AGATTGTTGTGTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204365 13 + 4569836 AGATTGTTGTGTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154768 13 - 159171411 ATGTCGTTGTGTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874927 13 + 3513951 AGATTGCTGTATA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10482 13 - 4077172 AGGTTGTTGTGTT i cebCap1.NW_016107543v1 I 23 C 0 s aotNan1.NW_018505111v1 4264 13 - 94492 AGGTTGTTGTGTA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868132 13 + 28711273 AGATTGTTGTGTG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 546585 13 - 852752 AGGTTGGTCTGTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e canFam3.chr9 21479679 65 + 61074082 I e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=110260.000000 s hg38.chr17_JH159148v1_alt 41223 13 + 88070 AGGATGATGGTCC s panTro5.chr17 16352215 13 + 83181570 AGGATGATGGTCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256963 13 + 83442489 AGGATGATGGTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104112 13 + 4267968 AGGATGATGGTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090661 13 - 2193130 AGGATGATGGTCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997168 13 - 8458610 AGGATGATGGTCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946130 13 + 75148670 AAGATAGTGGTTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181380 13 + 4244037 AGGATGATGGTCC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204378 13 + 4569836 AGGATGATGGTCC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154781 13 - 159171411 AGGATGATGGTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874940 13 + 3513951 AGGATGATGGTCC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10495 13 - 4077172 AGGATGATGGTCC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4277 13 - 94492 AGGATAGTGGTCC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868145 13 + 28711273 ATGATGATGGTCT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21479744 13 + 61074082 AAGAGAGTGGTCC i canFam3.chr9 I 65 I 17134 s dasNov3.JH570468 546598 13 - 852752 CACTTGGTGATCT i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=83736.000000 s hg38.chr17_JH159148v1_alt 41236 16 + 88070 TCTGTGGTGCTGCTCA s panTro5.chr17 16352228 16 + 83181570 TCTGTGGTGCTGCTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256976 16 + 83442489 TCTGTGGTGCTGCTCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104125 16 + 4267968 TCTGTGGTGCTGCTCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090674 16 - 2193130 TCTGCGGTGCTGCCCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997181 16 - 8458610 TCTGCCGTGCTGCTCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946143 16 + 75148670 TCTTGGGAATTGATCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181393 16 + 4244037 TCTGCCGTGCTGCTCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204391 16 + 4569836 TCTGCCGTGCTGCTCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154794 16 - 159171411 TTGTCAGGGCTGATCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874953 16 + 3513951 TTGGCAATGCTGATCA i saiBol1.JH378271 C 0 T 12186 s cebCap1.NW_016107543v1 10508 16 - 4077172 TTGGCAGTGCTGATCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4290 16 - 94492 TTGGCAGTGCTGATCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868158 16 + 28711273 TTTGGAGAGTGGATCA i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21496891 16 + 61074082 TATGGCAAGTTGCTCA i canFam3.chr9 I 17134 C 0 s dasNov3.JH570468 546611 15 - 852752 -TTGGCGAGTTGATCA i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=127287.000000 s hg38.chr17_JH159148v1_alt 41252 15 + 88070 GCAACAAGAATGCTG s panTro5.chr17 16352244 15 + 83181570 GCAACAAGAATGCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16256992 15 + 83442489 GCAACAAGAATGCTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104141 15 + 4267968 GCAACAAGAATGCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090690 15 - 2193130 GCAACAAGAAGGCTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1997197 15 - 8458610 GCAACAAGAAGGCTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946159 15 + 75148670 GCAGCAAGAAGGCTG i chlSab2.chr16 C 0 I 26412 s manLeu1.NW_012106252v1 2181409 15 + 4244037 GCAACAAGAAGGCTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204407 15 + 4569836 GCAACAAGAAGGCTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46154810 15 - 159171411 GCAGCAGCAGGGCTG i calJac3.chr5 C 0 I 27 s saiBol1.JH378271 1862783 15 + 3513951 GCAGCAGCAAGGCGG i saiBol1.JH378271 T 12186 I 42 s cebCap1.NW_016107543v1 10524 15 - 4077172 GCACCAGGAAGGCTG i cebCap1.NW_016107543v1 C 0 I 42 s aotNan1.NW_018505111v1 4306 15 - 94492 GCAGCAGCAAGGCTG i aotNan1.NW_018505111v1 C 0 I 42 s otoGar3.GL873537 22868174 15 + 28711273 GCAGCGGGAAGGCTG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21496907 15 + 61074082 GCAGCAGCAAGGCTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 546626 15 - 852752 GCAGCAGGAAGGCTG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22147409 13865 - 122082543 T e macNem1.NW_012014910v1 2132305 190 + 10377808 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1227547.000000 s hg38.chr17_JH159148v1_alt 41267 144 + 88070 ------------------------------------------------------------GCAGCAGCTGGACACACAGCAGGCTGGGCAGTAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTGAGGCAACCAGGCAGGCAGACAGTCGTGGGGTGGTAGCAGGTTCTTCTGCAGTACACAGGTGCACAG------------GAGCTGCT--- s panTro5.chr17 16352259 144 + 83181570 ------------------------------------------------------------GCAGCAGCTGGACACACAGCAGGCTGGGCAGTAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCAGGTTTAGGCAACCACGCAGGCAGACACTCGTGGGGTGGTAGCAGGTTCTTCTGCAGTACACAGGTGCACAG------------GAGCTGCT--- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257007 144 + 83442489 ------------------------------------------------------------GCAGCAGCTGGACACACAGCAGGCTGGGCAGTAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCAGGTTTAGGCAACCAGGCAGGCAGACACTCGTGGGGTGGTAGCAGGTTCTTCTGCAGTACACAGGTGCACAG------------GAGCTGCT--- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104156 144 + 4267968 ------------------------------------------------------------GCAGCAGCTGGACACACAGCAGGCTGGGCAGTAGCA------------------GGGCTGGCAGCAGCTGTATCCACAGC-TCAGGTTTAGGCAACCAGGCAGGCAGACACTTGTGGGGAGGTAGCAGGTTCTTCTGCAGTACACAGGTTCACAG------------GAGCTGCT--- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090705 144 - 2193130 ------------------------------------------------------------GCAGCAGCTGGACACACAGCAGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCAGGTCTAGGCAACCAGGCAGGCAGACACTTGTGGGGTGGTAGCAGGTTCTTCTGCAGTACACAGGTGCACAG------------GAGCTGCT--- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132495 144 + 10377808 ------------------------------------------------------------GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCATAGC-TCTGGTTTAGGCAACCAGGCAGGCAGACACTTGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCACAG------------GAGCTGGT--- i macNem1.NW_012014910v1 I 190 C 0 s cerAty1.NW_012006043v1 1997212 144 - 8458610 ------------------------------------------------------------GCAGCAGGTGGACACACAGCAGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTTAGGCAACCAGACAGGCAGATGCATGTAGGGTGGTAGCAGGTTCTCCTGCAGTAGACAGGTGCACAG------------GAGCTGGT--- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972586 144 + 75148670 ------------------------------------------------------------GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCATAGC-TCTGGTTTAGGCAACCAGGCAGGCAGACACATGTAGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCACAG------------GAGCTGGT--- i chlSab2.chr16 I 26412 C 0 s manLeu1.NW_012106252v1 2181424 144 + 4244037 ------------------------------------------------------------GCAGCAGGTGGACACACAGCAGGCTGGGCGGCAGCA------------------GGACTGGCAGCAGCTGGATCCACAGC-TCTGGTTTAGGCATCCAGACAGGCAGATGCATGTAGGGTGGTAGCAGGCTCTCCTGCAGTAGACAGGTGCTCAG------------GAGCTGGT--- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204422 144 + 4569836 ------------------------------------------------------------GCAGCAGCTGGACACACAGCAGGCTGGGTGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTTAGGCAACCAGGCAGGCAGACGTATGTAGGGTGGTAACAGGTTCTCCTGCAGTACACAGGTGCACAG------------GAGCTGGT--- i colAng1.NW_012122154v1 C 0 I 346 s calJac3.chr5 46154852 144 - 159171411 ------------------------------------------------------------GCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTTAGGCAGCCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTCCTCGTGCAGTACACAGGTGCACAG------------GAGCTGGT--- i calJac3.chr5 I 27 C 0 s saiBol1.JH378271 1862840 144 + 3513951 ------------------------------------------------------------GCAGCAGGTGGTCTCACAGCAGGCTGGGTGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTCAGGCAACCGGGCAGGCGGACACATGTGGGGTGGTAGCAGGTTCTTGTGCAGTACACAGGGGCACAG------------GAGCTGTT--- i saiBol1.JH378271 I 42 C 0 s cebCap1.NW_016107543v1 10581 144 - 4077172 ------------------------------------------------------------GCAGCAGGTGGTCTCACAGCTGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTCAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTACTGCAGTATACAGGTACACAG------------GAGCTGGT--- i cebCap1.NW_016107543v1 I 42 C 0 s aotNan1.NW_018505111v1 4363 144 - 94492 ------------------------------------------------------------GTAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCA------------------GGGCTGGCAGCAGCTGGATCCACAGC-TCTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTGCTGCAGTACACAGGTGCACAG------------GAACTGGT--- i aotNan1.NW_018505111v1 I 42 C 0 s otoGar3.GL873537 22868189 94 + 28711273 ------------------------------------------------------------------------------------------------------------------------GCAGCAGCTA--------------GGTTCAGACAGCCAGGCAGGCAGACGCAGGTGGGCTGGTAGCAGGTCCTGGTGCAGTAGACAGGTGCACAGC-------TGCTGGGCTGGC--- i otoGar3.GL873537 C 0 I 52 s mm10.chr11 22133544 121 - 122082543 ------------------------------------------------------------GCAGCAACTGGCCACACA---GGCTGGTTTGCAGCA---------------GGTGGTTTCACAGCAGCTGGGTTGGCAGCAGCTGGT-----CACACAGGTTGGCTTACA-----------GCAGCAGGTGGTCCTGTAGCAGGTGGTTTCACAG----------------------- i mm10.chr11 T 13865 C 0 s canFam3.chr9 21496922 132 + 61074082 ------------------------------------------------------------GCAGCAGCTAGACACACAGCATGTGGGCTTGCAGCAGGTGGTCCTGCAGCAGGTGGTGTGACAGCACGTTGGGCGGCAGC-A---------GCAA---------------------GGCTGGCAGCAGCTGGACCCGCAGCCACTGGACCCACAG------------CAGCTGGG--- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 546641 216 - 852752 ACAGTAACTGGACGCACAACAAGGGTTGCTGTAGAAGCTGGGCCGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTGACAGCAGGATGGGCGGCAGCA------------------GGGCTGGCAGC---TGGATCCGCAGC-TCTGGGGTTGGCAACCAGGCAAGCAGCAGCATGTTGGGTGGTAGCAGGTTCTCCTGCAGTACACGGGGCCACTGTAAGCAGGCTCGCAGCAGGTTCT i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=335801.000000 s hg38.chr17_JH159148v1_alt 41411 46 + 88070 ----------CTGG-----CCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC s panTro5.chr17 16352403 46 + 83181570 ----------CTGG-----CCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257151 46 + 83442489 ----------CTGG-----CCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104300 46 + 4267968 ----------CTGG-----CCACAGCTGGACCCACAGCTGGTTTGGCCACAGAAGCTGGAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090849 46 - 2193130 ----------ATGG-----CCATAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132639 46 + 10377808 ----------CTGG-----CCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997356 34 - 8458610 ----------TTGG-----------------CCACAGCTGGTTTGGCCACAGCAGCTGGAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972730 46 + 75148670 ----------CTGG-----CCACAGCAGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181568 34 + 4244037 ----------TTGG-----------------CCACAGCTGGTTTGGCCACAGTAGCTGGAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204912 46 + 4569836 ----------CTGG-----CCACAGCTGGACCCACAGTTGGCTTGCCCACAGCAGCTGGAC i colAng1.NW_012122154v1 I 346 C 0 s calJac3.chr5 46154996 46 - 159171411 ----------CTGA-----CCACAGCTGGAGCCACAGCTGGTTTGGCCACAGCAGCTGGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1862984 46 + 3513951 ----------CTGA-----CCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGAC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10725 34 - 4077172 ----------CTG-----------------GCCACAGCTGGTTTGGCCACAGCAGCTGGAC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4507 34 - 94492 ----------CTG-----------------GCCACAGCTGGTTTGGCTACAGCAGCTGGAC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868335 43 + 28711273 ----------CTTA-----CAGCAGGTGGTTGGACAGCAGGTTGGAAGGCAGCAGCTT--- i otoGar3.GL873537 I 52 C 0 s mm10.chr11 22133665 39 - 122082543 ----------------------CTGCTGGGCTGACAGCAGGGTGGGCTACAGCAGCTGGTC i mm10.chr11 C 0 I 105 s canFam3.chr9 21497054 46 + 61074082 ----------CTGG-----CAGCAGCTGGACACACAGCATGTGGGCTTGCAGCACGTGGTC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 546857 61 - 852752 GTAGCAGTGATTGGGGCAGCAGCAGGTGGATTCACTGCAGGTTTGGCCACAGGAGCTGGAC i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=305933.000000 s hg38.chr17_JH159148v1_alt 41457 32 + 88070 CCACAGCAGATGGGCTGGTAGCAGGGTGTGCT s panTro5.chr17 16352449 32 + 83181570 CCACAGCAGGTGGGCTGGCAGCAGGGTGTGCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257197 31 + 83442489 CCACAGCAGGT-GGCTGGTAGCAGGGTGTGCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104346 32 + 4267968 CCACAGCAGGTGGGCTGGTAGCAGGGTATGCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090895 32 - 2193130 CCATAGCAGGTGGGCTGGTAGCACGGTGTGCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132685 32 + 10377808 CCACAGCAGGTGGGCTGGCAGCAGGGTGTGCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997390 32 - 8458610 CCACAGCAGGTGGGCTGGCAGCAGGGTGTGCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972776 12 + 75148670 CCACAGCAGGTG-------------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181602 32 + 4244037 CCACAGCAGGTGGGCTGGCAGCAGGGTGTGCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204958 32 + 4569836 CCAAAGCAGGTGGGCTGGCAGCAGGGTGTGCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155042 32 - 159171411 CCACAGCAGGTGGGCTGGCAGCAGGATGTGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1863030 32 + 3513951 CCACAGCATGTGGGCTGGCAGCAGGGTGTGCT i saiBol1.JH378271 C 0 I 11907 s cebCap1.NW_016107543v1 10759 32 - 4077172 CCACAGCAGGTGGGCTGGCAGCAGGATGTGCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4541 32 - 94492 CCGCAGCAGGTGGGCTGGCAGCAAGGTGTGCT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868378 27 + 28711273 -----CCAGTGGGGCTGGCAACAGGGTGTGCT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133809 32 - 122082543 TCACAGCAGCTGGGCTGGCAACAGGGTGGGCT i mm10.chr11 I 105 C 0 s canFam3.chr9 21497100 32 + 61074082 CTGCAGCAGGTGGTGTGACAGCACGTTGGGAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 546918 32 - 852752 CCACAGCGGGTCGACTGACAGCAGGGAGTGGT i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=553649.000000 s hg38.chr17_JH159148v1_alt 41489 58 + 88070 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTG s panTro5.chr17 16352481 58 + 83181570 GCAGCAGGAA---------------------------------------------------------GGCTGGCAACAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTTGTCCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257228 58 + 83442489 GCAGCAGGAA---------------------------------------------------------GGCTGGCAACAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104378 85 + 4267968 GCAGCAGGAA------------GGCTGGCAACAGCTGGTCACACA------------------GGTGGGCTGGCAACAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090927 58 - 2193130 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132717 58 + 10377808 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTTCTA i macNem1.NW_012014910v1 C 0 I 126 s cerAty1.NW_012006043v1 1997422 58 - 8458610 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAA---ATGGGCTGGCAGCAGGTGGTTCTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972788 48 + 75148670 -------------------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181634 58 + 4244037 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGGTGGTCACACAA---ATGGGCTGGCAGCAGGTGGTCCTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2204990 52 + 4569836 GCAGCAGGAA---------------------------------------------------------GTCCGGCAGCAGCTGGTCACACAG---ATGGGCTGGCAGCAGGTG------ i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155074 58 - 159171411 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1874969 58 + 3513951 GCAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTTACACAG---GTGGGCTGGCAGCAAGTGGTCCTG i saiBol1.JH378271 I 11907 C 0 s cebCap1.NW_016107543v1 10791 58 - 4077172 ACAGCAGGAA---------------------------------------------------------GGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4573 85 - 94492 GCAGCACGAA------------GGCTGGCAGCAGCTGGTCACACA------------------GGTGGGCTGGCAGCAGCTGGTCACACAG---GTGGGCTGGCAGCAGGTGGTCCTG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868405 43 + 28711273 ------------------------------------------------------------------------GCAGTAGGTGGTCTCACAT---GTTGGCCACCAGCAGGTGGTCCTG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133841 100 - 122082543 GCAGCAGCTAGTTATACAGATTGGCTTATAGCAGGTGGTTTCACA--CAT-------------GCTGGGCTGGCAGCAGCTGTTTATACTG---GTTGGCTTACAGCAGGTGGTCCTA i mm10.chr11 C 0 C 0 s canFam3.chr9 21497132 106 + 61074082 GCAGCAGCAA------------GGCTGGCAGCAGCTGGACCCGCAGCCACTGGACCCACAGCAGCTTGGCTGGCAGCAGCTGGACACACAGCATGTGGGCTTGCAGCAGGTGGTCCTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 546950 58 - 852752 GCAGCAGGAA---------------------------------------------------------GGTTGGCAGCAGCTGGTCACACAG---GTTGGCCGGCAGTAGGTGGTCCTA i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=674328.000000 s hg38.chr17_JH159148v1_alt 41547 61 + 88070 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGTAAGGCTGGCAGCAGCTGGACACACAGC s panTro5.chr17 16352539 61 + 83181570 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257286 61 + 83442489 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104463 61 + 4267968 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2090985 61 - 2193130 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAACAGCTGGACACACAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132901 61 + 10377808 CAGCAGGTGTTTTGACAGCAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i macNem1.NW_012014910v1 I 126 C 0 s cerAty1.NW_012006043v1 1997480 61 - 8458610 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972836 61 + 75148670 CAGCAGGTGTTTTGACAGCAAGTTGGGCGGCAACAAGGCTGGCAACAGCTGGACACACAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181692 61 + 4244037 CAGCAGATGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205042 52 + 4569836 ---------TTTTGACAGCAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155132 61 - 159171411 CAGCAGGTGTTTTGACAGCAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875027 61 + 3513951 CAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCACAGC i saiBol1.JH378271 C 0 T 6403 s cebCap1.NW_016107543v1 10849 61 - 4077172 CAGCAGGTGTTTTGACAGCAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4658 61 - 94492 CAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868448 61 + 28711273 CGGCAGGTGGTTGGACAGCAAGTTGGGCGGCAGCAGGGCTGGAGGCAGCTGTACTCATAGC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133941 19 - 122082543 CAGCAGGTGGTTTCACAGC------------------------------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 21497238 61 + 61074082 CAGCAGGTGGTATGACAGCATGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACCCACAGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547008 57 - 852752 CAGCAGGTGGTCTGACAGCAGAGTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACCCA---- i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=675760.000000 s hg38.chr17_JH159148v1_alt 41608 74 + 88070 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACAATGG-----------------------------------------TGGGCTGCCAGCAGGTAGTCCTGCAGCAA s panTro5.chr17 16352600 74 + 83181570 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACAATGG-----------------------------------------TGGGCTGCCAGCAGGTAGTCCTGCAGCAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257347 74 + 83442489 AGGAGGGCTGTCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACAATGG-----------------------------------------TGGGCTGCCAGCAGGTAGTCCTGCAGCAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104524 74 + 4267968 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------TACAATGG-----------------------------------------TGGGCTGCCAGCAGGTAGTCCTGCAGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091046 74 - 2193130 AGGTGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACAATGG-----------------------------------------TGGGCTTCCAGCAGGTAGTCCTGCAGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2132962 74 + 10377808 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGCAGCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997541 74 - 8458610 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACAGTGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGTGACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972897 74 + 75148670 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGCAGCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181753 74 + 4244037 TGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACAGTGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGTGACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205094 74 + 4569836 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGCAGCAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155193 74 - 159171411 AGGAGGGCTGGCAGCAGGGTGTGCTGCAGCAGCTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGCAGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868685 74 + 3513951 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGCTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTAGTCCTGCAGCAG i saiBol1.JH378271 T 6403 C 0 s cebCap1.NW_016107543v1 10910 74 - 4077172 AGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGCTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGCAGCAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4719 74 - 94492 AAGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGGTGGT-------CACACAGG-----------------------------------------TGGGCTTCCAGCAGGTGGTCCTGCAGCAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868509 74 + 28711273 AGCTGGGCTGGCAGCAGGGTGTGCTGCAACAGGTGGC-------CTCACAGG-----------------------------------------TGGGCTGCCAGTAGATGGTCCTGCAGCAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22133960 71 - 122082543 AGCTGGGCTGGTAGCGGGATGGACTGCAAC---TGGT-------CACATAGG-----------------------------------------TTGGTCTGCAGCAGGTAGTCCTGCAGCAA i mm10.chr11 C 0 I 4 s canFam3.chr9 21497299 122 + 61074082 ATGTGGGCTTACAGCTCGAGGTCCTGCAGGAGGTGGTGTGACAGCACGTTGGGAGGCAGCAGCAAGGCTCACAGCAGCTGGATCCACAGCATCTGGGCTCGCAGCAGGTGGTCCTGTTGCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547065 6 - 852752 --------------------------------------------------------------------------------------------------------CAAGAA------------ i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=132596.000000 s hg38.chr17_JH159148v1_alt 41682 16 + 88070 GTGGTC---------------------------------------------CTGCAGCAGG s panTro5.chr17 16352674 16 + 83181570 GTGGTC---------------------------------------------CTGCAGCAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257421 16 + 83442489 GTGGTC---------------------------------------------CTGCAGCAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104598 16 + 4267968 GTGGTC---------------------------------------------CTGCAGCATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091120 16 - 2193130 GTGGTC---------------------------------------------CTGCAGCATG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133036 16 + 10377808 GTGGTC---------------------------------------------CTGCAGCACG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997615 16 - 8458610 GTGGTC---------------------------------------------CTGCAGCACG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972971 16 + 75148670 GTGGTC---------------------------------------------CGGCAGCACG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181827 16 + 4244037 GTGGTC---------------------------------------------CTGCAGCACG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205168 16 + 4569836 GTGGTC---------------------------------------------CTGCAGCACG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155267 16 - 159171411 GTGGTC---------------------------------------------CGGCAGCACG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1868759 16 + 3513951 GTGTTT---------------------------------------------TGACAGCAAG i saiBol1.JH378271 C 0 I 6764 s cebCap1.NW_016107543v1 10984 16 - 4077172 GTGGTC---------------------------------------------CTGCAGCAGG i cebCap1.NW_016107543v1 C 0 I 60 s aotNan1.NW_018505111v1 4793 16 - 94492 GTGGTC---------------------------------------------CTGCAGCACG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868583 61 + 28711273 GTGGTTAGACAGCAAGCTGGGTGGCAGCAGCTGGGCTGGCAGCAGGGCGTGCTGCAGCAGG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21497421 16 + 61074082 GTGGTC---------------------------------------------TTGCAGCACG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547071 16 - 852752 CTGGAC---------------------------------------------CCACAGCAGG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22134031 4 - 122082543 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=33255.000000 s hg38.chr17_JH159148v1_alt 41698 3 + 88070 TAG s panTro5.chr17 16352690 3 + 83181570 TAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257437 3 + 83442489 TAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104614 3 + 4267968 TAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091136 3 - 2193130 TAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133052 3 + 10377808 TAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997631 3 - 8458610 TAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972987 3 + 75148670 TAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181843 3 + 4244037 TAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205184 3 + 4569836 TAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155283 3 - 159171411 TAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875539 3 + 3513951 TAG i saiBol1.JH378271 I 6764 C 0 s cebCap1.NW_016107543v1 11060 3 - 4077172 TAG i cebCap1.NW_016107543v1 I 60 C 0 s aotNan1.NW_018505111v1 4809 3 - 94492 TAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868644 3 + 28711273 TGG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21497437 3 + 61074082 TGG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547087 3 - 852752 TGG i dasNov3.JH570468 C 0 C 0 e mm10.chr11 22134031 4 - 122082543 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1550367.000000 s hg38.chr17_JH159148v1_alt 41701 149 + 88070 GCTGACAGCCAGGGGAGCAAC---AGTGGGTCATGTTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGGAT----TTGATGACCCCTTGCAATCTGGACCTTTTATACATGTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGA s panTro5.chr17 16352693 149 + 83181570 GCTGACAGTGAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGGAT----TTGATGACCCCTTGCAATCTGGACCTTTTATACATGTGGC--------CTCCAAAGTTTCCACCAGTCAGCAGGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257440 149 + 83442489 GCTGACAGTGAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGGAT----TTGATGACCCCTTGCAATCTGGACCTTTTATACATGTGGC--------CTCCAAAGTTTCCACCAGTCAGCAGGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104617 149 + 4267968 GCTGACAGCAAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----TTGATGACCCCTTGCAATCTGGACCTTTTATACATCTGGC--------CTCCAAAGTTTCCACCAGTCAGCAGGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091139 149 - 2193130 GCTGACAGCAAGGGGAACAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGACTTCTGTTCAGAGGTGAGTTTCCCAGAAT----TTGATGACCTCTTGCAATCTGGACCTTTTATACGCGTGGC--------CTCCAAAGTTTCCACAAGTCAGCAGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133055 149 + 10377808 GCTGACAGCAAGGGGAGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAAG-GTGGGCTTCTATTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997634 149 - 8458610 GCTGACAGCAAGAGGAGCAGC---AGTGGGTCATGGTGTCAGGGGTGGAAG-GTGAGTTTCTGTTCAGAGGTGAGTTTCCAAGAAT----TTGATGACCCCTTGCAGTCTGGACCTTTTGTAAACCTGGC--------CTCCAAAGTGTCCACCAATCTGCAGGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972990 149 + 75148670 GCTGGCAGCAAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGACG-GTGGGTTTCTATTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2181846 149 + 4244037 GCTGACAGCAAGAGGAGCAGC---AGTGGGTCATGGTGTCAGGGGTGGAAG-GTGAGTTTCTGTTCAGAGGTGAGTTTCCAAGAAT----TTGATGACCCCTTGCAGTCTGGACCTTTTGTAAACCTGGC--------CTCCAAAGTGTCCACCAATCTGCAGGG i manLeu1.NW_012106252v1 C 0 I 308 s colAng1.NW_012122154v1 2205187 149 + 4569836 GCTGGCAGCAAGGGGAGCAAC---AGTTGGTCATGGTGTCAGGCGTGAAGG-GTGGGCTTCTGTTCAGAGGTGAATTTCCCAGAAT----CTGATGACCCCTTGCAATCTAGACCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCTGCAGGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155286 149 - 159171411 GCTGGCAGCAAGGGGAGCAGC---AGTGGGTCATGATGTCAGAAGTGGACG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCTTCCAATCTGGGCCTTTTATACATGTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875542 149 + 3513951 GCTGGCAGCAAGGGGAGCAGC---AGTGGGTCATGGTGTCAGGGGTGGATG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACTCCTTCCAATCTGGGCCTTTTATACATCTGGC--------CTCCAACGTTTCCACCAATCAGCAGGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11063 149 - 4077172 GCTGGCAGCAAGGGGAGCAGC---AGTAGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCGGAAT----CTGACGGCTCCTTCCAATCTGGGCCTTTTATACACCTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4812 149 - 94492 GCTGGCAGCAAGGGGAGCAGC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGATCCTGTTCAGAGGTGAGTTTCCCAGAAT----TTGATGACCCCCTCTAATCTGGACCTTTTATACATGTGGC--------CTCCAAAGTTTCCACCAATCAGCAGGA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868647 146 + 28711273 ACTGGCAGCAAGGGGAGCAGC---AGTGGGTCATGGCGTCCTGTGTGGAGG-GTGGGCTCCTGTTCAGAGGTGAGTGTCCCAGAAT----CTGCTGATGCCTTCCAATGTGGACCTTTTATATACTGGGC--------CTCCGAAGTTTGGACCAATTGGCA--- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134035 150 - 122082543 GCTGACTGCAAGGGGAGCAGCAAGAGTTGGTCATGGTGTCAAG-ATGGTTG-G-AGGTTCCTGTTAACAGGTGAGTTTCCTACAAT----ATGATGAGTTCTTGCATTCTGGCCATTTTATATGCCAGAC--------CTCCAAGGTTTGGACCAATCAGCAGGA i mm10.chr11 I 4 C 0 s canFam3.chr9 21497440 165 + 61074082 GCTGGCAGCACGGGGAGCAGCACGATTCACTCATGGTGTCGCCGGGGGAGGCGTGGGCTTCTGTTCTGAGGTGACGTTCTCAGATTCTGACTGATGCCTCCTTCCATTCTGGCGCTTTTATACACTGGACCCCCTCAACCCCAACGTATGGACCAATGGGCAGGA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547090 143 - 852752 GCTGGCAGCAGGGAGAGCAGC---AGGAGGTCATGGTGTCAGGGTTAAAGG---GGGCTCGTGTTCAGAGATG--TTTCCCAGAAT----CCGATGGCTCCTTTAATTCTGTGTCTTTTATAC-CCTGGG--------TCCCAATATTT-GACCAATCAGCAGGT i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=693483.000000 s hg38.chr17_JH159148v1_alt 41850 89 + 88070 TTTTTCTTTCTTGCTGTTTACAG-TTGTTTTCCATAGTCAGTTTG-GCATTGTCAAAGAGGAAGTCATTTCCTAAA-TGTTATGAATCTTTG s panTro5.chr17 16352842 89 + 83181570 TTTTTCTTTCTTGCTGTTTACAA-TTGTTTTCCATAGTCAGTTTG-GCATTGTCAAAGAGGAAGTCATTTCCTAAA-TGTTATGAATCTTTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257589 89 + 83442489 TTTTTCTTTCTTGCTGTTTACAA-TTGTTTTCCATAGTCAGTTTG-GCATTGTCAAAGAGGAAGTCATTTCCTAAA-TGTTATGAATCTTTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104766 89 + 4267968 TTTTTCTTTCTTGCTGTTTACAA-TTGTTTTCCATAGTCAGTTTG-GCACTGTCAAAGAGGAAATCATTTCCTAAA-TGTTATGAATCTTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091288 89 - 2193130 TTTTTCCTTCTTGCTGTTTACAA-TTGTTCTCCATAGTCAGTTTG-GCATTGTCAAAATCGAAGTCATTTCCTAAA-TGTTATGAATCTTTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133204 88 + 10377808 CTTTTCCTTGTTGCTGTTTAC-A-TTGTTTTTCATACGCACTTTG-CGATCGTCAAAGGGGAAGTTGTTTCTGAAA-TCTTATGAATCTGTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997783 89 - 8458610 TTTTTCTTTGTTGCTGTTTAC-ACTTGTTTTCTATAGTCAGTTTG-GCATTGTCAAAGAGGAAGTCATTTCCCAAA-TGTTATGAATCTTTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973139 88 + 75148670 CTTTTCCTTGTTGCTGTTTAC-A-TTGTTTTTCATACTCCCTTTG-TGATCGTCAAAGGGGAAGTTGTTTCTGAAA-TCTTATGAATCTGTT i chlSab2.chr16 C 0 T 36763 s manLeu1.NW_012106252v1 2182303 89 + 4244037 TTTTTCTTTGTTGCTGTTTACAA-TTGTTTTCTATAGTCAGTTTG-GCATTGTCAAAGAGGAAGTCATTTCCCAAA-TGTTATGAATCTTTG i manLeu1.NW_012106252v1 I 308 C 0 s colAng1.NW_012122154v1 2205336 89 + 4569836 TTTTTCTTTGTTGCTGTTTACAA-TTGTTTTCCATAGTCAGTTTG-GCATTGTCAAAGAGGAAGTCATTTCCTAAA-TGTTATGAATCTTTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155435 88 - 159171411 CTTTTCCTTGTTGCTGTTTAC-A-TTGTTTTCCACAGTCCGATTG-GGATTGTCAAAGGGGAAGTTGTTTTTGAAA-TCTTATGAATCTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875691 88 + 3513951 CTTCTCATTGTTGCTGTTTAC-A-TTGTTTTCTATAGTCAGTTTG-GGATTATCAAAGAGGAAGTCATTTACTAAA-TGCTATGAATCTTTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11212 88 - 4077172 CTTTTCCTTGTTGCTGTTTAC-A-TTGTTTTCTATAGTCAGTTTG-GGATTATGAAAGAGGAAGTCATTTCCTAAA-TGCTATGAATCTTTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 4961 86 - 94492 CTGTTCCTTGTTGCTGTTTAC-A-TTGTTTTCTATAGTCAGTTTG-GGATTATCAAAGAGGAAGTCATTTCCTGAA-TGTTATGAATCTT-- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868793 87 + 28711273 CATTTTTTTCCTGTTGTTTCC-A-TTGTTTTCTATGGTCACTGGGTGAATTATAAAGGAAGAAGTTG--TAGTAAG-TGCTAAGAATATATC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134185 83 - 122082543 CTTTTCCTTGATGTTGTTTAC-A-CCATTTTCCATATTCAGTTTG-TGTTTCATAAGGAAGTG-----TTTCTCAA-TGTTATGCATCATTT i mm10.chr11 C 0 C 0 s canFam3.chr9 21497605 78 + 61074082 --CTTCCCT-----TGTTTAT-A-CCGTTTTCCATAGTCACTGGC-GGCTGGTAGAAGAGGAAGT---TCCCTAAA-TGTTAGGAATCCCTA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547233 87 - 852752 CTTTTCCCTATTATTG---AC-A-TTGTTTACCTTAGATAGTGGGCAAACTACCAAGGAGGATGTTTTCCCCCAAAGTGTTGTGACTCTTTT i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=604023.000000 s hg38.chr17_JH159148v1_alt 41939 71 + 88070 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTAAATTACTCGTAGAAA-CTTTGTTTCAGATAAAAGGAAGG s panTro5.chr17 16352931 71 + 83181570 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTAAATTACTCGTAGAAA-CTTTGTTTCAGATAAAAGGAAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257678 71 + 83442489 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTAAATTACTCGTAGAAA-CTTTGTTTCAGATAAAAGGAAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104855 71 + 4267968 GAAAGTAAGGGTTTATTCTGTTTCTTAACTGTAAATTACTCGTAGAAA-CTTTGTTTCAGATAAAAGGAAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091377 71 - 2193130 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCACAGAAA-CTTTGTTTCAGATAAAAGGAAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133292 71 + 10377808 GAAAGTAAGTGTTTAATCTGTTTGTTAATTGAGAATTACTCATAAAAA-CTTCGTTTCAGATAAAAGGAAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997872 71 - 8458610 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAA-CTTTGTTTCAGATAAAAGGAAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936464 70 + 75148670 TAAAGTAAGGGTTTAATATGTCTCTTAATTGTG-TTTACTCATAGAAA-CTTTGTTTCAGATAAAAGGAAAC i chlSab2.chr16 T 36763 C 0 s manLeu1.NW_012106252v1 2182392 71 + 4244037 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAA-CTTTGTTTCAGATAAAAGGAAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205425 71 + 4569836 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAA-CTTTGTTTCAGATAAAAGGAAGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155523 72 - 159171411 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCACAGAAACTTTTGTTTCAGATAAAAGGAAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875779 71 + 3513951 GAAAGTAAGAGTTTAATCTGTTTCTTACTTGTGAATTACTCATAGAAA-TGTTGTTTTAAGTAAAAGGAAGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11300 71 - 4077172 GAAAGTAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCATAGCAAATGTCATTT-AAGTAAAAGGAAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5047 66 - 94492 -----TAAGGGTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAA-TGTTGTTTCAAGTAAAAGGAAGG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22868880 70 + 28711273 AGAAGTAAGTTTTTGATCCGTTTCCTAATTGCTAATAACTCGTAGAAA-CTGT-TTTCAGATAAAAGGAAAG i otoGar3.GL873537 C 0 I 152 s mm10.chr11 22134268 56 - 122082543 GAAAGT------------TGATTCTTATTCCAGAGTAAATCATGGGAA-CTC--TTTCA-ACAGGGGCAAGG i mm10.chr11 C 0 C 0 s canFam3.chr9 21497683 67 + 61074082 GAGAATAGGTGCTTAA--CAGTTTTTAATTGAGAGTAACTCATAGGAA-CATTG--TCAGAGGGAAGCAAGA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547320 68 - 852752 CAAAGTAAGTGTTTAATCATTCCCGTCATTGAGA--TATGTATAGAAA-CTGC-TTTCAGTTATGAGGAAGG i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=590762.000000 s hg38.chr17_JH159148v1_alt 42010 73 + 88070 CAGTCTC-----------------------------------------------------------ATCATCAGCTTCGTTCCTGCTCTGACCAGCATCTCGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- s panTro5.chr17 16353002 73 + 83181570 CAGTCTC-----------------------------------------------------------ATCATCAGCTTCGTTCCTGATCTGACCAGCATCTCGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257749 73 + 83442489 CAGTCTC-----------------------------------------------------------ATCATCAGCTTCGTTCCTGCTCTGACCAGCATCTCGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104926 73 + 4267968 CAGTCTC-----------------------------------------------------------ATCATCAGCTTCGTTCCTGCTCTGACCAGCATCTCGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091448 73 - 2193130 CAGTCTC-----------------------------------------------------------ATCATCAGCTTCGTTCCTGCTCTGACCATCATCTCGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133363 73 + 10377808 CAGTCTC-----------------------------------------------------------ATTATCAGCATCATTCCTGCTCTGACCATCATCCCGTCATGTGAT--AGTTCCTG----GTGATGTGGGAGG- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1997943 73 - 8458610 CAGTCTC-----------------------------------------------------------ATCATCGGCTTGGTTCCTGCTCTGACCATCATCTGGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936534 73 + 75148670 CTGTCTC-----------------------------------------------------------ATCATCAGCATCGTTTCTGCTCTGACCATCTTCTCATTATGTGTT--TGTTCCTG----GTGACTGGGGAGG- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182463 73 + 4244037 CAGTCTC-----------------------------------------------------------ATCATCGGCTTGGTTCCTGCTCTGACCATCATCTGGTCATGTGAT--AGTTCCTG----GTGACTGGGGAGG- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205496 73 + 4569836 CAGTCTC-----------------------------------------------------------ATCATCAGCTTGGTTCCTGCTCTGACCATCATCTGGTCGTGTGAT--AGTTCCTG----GTGACTGGGGAGG- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155595 73 - 159171411 CCGTGTC-----------------------------------------------------------ATCATTAGCATGGTTCCTGCTCTGATTATCTTCTGGTCATGTGAT--AGTTCCTG----GTGACTGGGAAGG- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875850 73 + 3513951 CAGTTTC-----------------------------------------------------------ATCAACAGCCTGCTTCCTGCTCTGACCATCATCTTGTCATGTGAT--AGTTCCTG----GTGACCAGGGAGG- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11371 73 - 4077172 CCATTTC-----------------------------------------------------------ATCATCAGCCTGCTTCCTACTCTGACCATCATCTTGTCATATGGT--AGTTCCTG----GTGACCAGGGAGG- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5113 73 - 94492 CAGTCTC-----------------------------------------------------------ATCATCAACCTGCTTCCTGCTCTGACCATCATCTTGTCATGTGAT--AGTTCCTG----GTGACCAGGGAGG- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869102 131 + 28711273 cagcctccctcccccaccaataaagacctttcatacaaAAAAAAAAAAAATAAGGAAAGTGATCATATCATCAGCATCATTCCTGCTGTGGTCATCACCT-GTCCTGTCAT--AATTCCTA----CTGGCCTGGGAGG- i otoGar3.GL873537 I 152 C 0 s mm10.chr11 22134324 73 - 122082543 GTATTGC-----------------------------------------------------------ACTACCATTCTCGCTGTATCCTTGATCATTATCTGATCATGTGGT--AGGCCTTA----AAATCTTGGGAGA- i mm10.chr11 C 0 C 0 s canFam3.chr9 21497750 79 + 61074082 TGGTCAC-----------------------------------------------------------ATTAGCAGCCTCGTTCTTGCTTCCGGGGCCGTGGGATCACGTGATGCAGTTCCTGGGACGTGGTTGGTGAGT- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 547388 72 - 852752 TGGTCAC-----------------------------------------------------------CTCCTCAGCATCATAGCTGCCCTG-TCATCATCT-GCCATGTGCT--AGTTCCCA----CTGGCCTGTGGTGG i dasNov3.JH570468 C 0 I 4141 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=143551.000000 s hg38.chr17_JH159148v1_alt 42083 22 + 88070 CTCAGGAAGTTCTCTCTGCCCA s panTro5.chr17 16353075 22 + 83181570 CTCAGGAAGTTCTCTCTGCCCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257822 22 + 83442489 CTCAGGAAGTTCTCTCTGCCCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4104999 22 + 4267968 CACAGGAAGTTCTCTCTGCACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091521 22 - 2193130 CTCAGGAAATTCTCTCTGCCCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133436 20 + 10377808 --CAGATAGTTCTCTCTGCCCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 1998016 22 - 8458610 CTCAGGAAGTTCTCTCTGCCCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936607 22 + 75148670 TTCAGGAAGTTCTCTCTACCTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182536 22 + 4244037 CTCAGGAAGTTCTCTCTGCCCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205569 22 + 4569836 CTCAGGAAGTTCTCTCTGCCCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155668 18 - 159171411 CTC---AAGTTCTCTCTAG-TA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875923 22 + 3513951 CTCAGGAAGTTCTCTCTGTCCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11444 22 - 4077172 CTCAAGAAGTTCTCTGTGCCCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5186 22 - 94492 CTCAGGAAGTTCTCTCTGCTCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869233 22 + 28711273 GTTTCAAAGTTCTCTCTGCCCA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134397 17 - 122082543 GTCAGAG-----TATCTGTTTA i mm10.chr11 C 0 C 0 s canFam3.chr9 21497829 16 + 61074082 C------AGTTTCGTGGTCCTA i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 547460 4141 - 852752 I e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1475311.000000 s hg38.chr17_JH159148v1_alt 42105 183 + 88070 GTCTCATC-CTTTGGCTGTATGTAGACTGGGAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTCTGATTCAAGA--CT--GA--TAGGCAT---CTCTCTAT--GTACAACCTACTTTACCTGTCTCTTCCAGTTCT s panTro5.chr17 16353097 182 + 83181570 GTCTCATC-CTTTGGCTGTATGTAGACTGGGAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC---------AAGTCTGATTCAAGA--CT--GA--CAGGCAT---CTCTCTAT--GTACAACCTACTTTACCTGTCTCTTCCAGTTCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16257844 183 + 83442489 GTCTCATC-CTTTGGCTGTATGTAGACTGGGAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTCTGATTCAAGA--CT--GA--CAGGCAT---CTCTGTAT--GTACAACCTACTTTACCTGTCTCTTCCAGTTCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105021 183 + 4267968 GTCTCATC-CTTTGGCTGTATGTAGTCTGGGAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTCTGATTCAAGA--CT--GA--CAGGCAT---CTCTCTAT--GTACAACCTACTTTACCTGTCTCTTCCAGTTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091543 183 - 2193130 GTCTCATC-CTTTGGCTGTATGTAGACTGGGAGGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCGTGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTCTGATTCAAGA--CT--GA--CAGGCAT---CTCTCTAT--GTGCAACCTACTTTACCTGTCTCTTCCAGTTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2133456 182 + 10377808 GCCTCAT--GGTTGGCTGTATGTAGACTGGGAAATGTCTGTGGGC------------------------------AGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCGGCCCCAAGCCTGTTCACCCACA--------AAAGTCTAATTCAAGA--GT--AA--CAAGCAT---CTTTCTTG--CTACAACCTACTCCCTCTGTGTCTTCCAGTTCT i macNem1.NW_012014910v1 C 0 T 16748 s cerAty1.NW_012006043v1 1998038 166 - 8458610 GTCTCATC-CTTTGGCTCTATGTAGACTGGGAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGCTTGATTCAAGG--TT--AA--CAGGAAT---CTCTCTAT--GTACGACCTACTTCCC----------------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936629 183 + 75148670 GCCTCTTT-CTTTGGCTATACCTAGGTTGGTAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCTACC--------GAAGTTTGATTCAAGG--TT--AA--CAGGCAT---CTCTCTAT--GTACGACCTACTTTACCTGTCTCTTCCAGTTCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182558 183 + 4244037 GTCTCATC-CTTTGGCTCTATGTAGACTGGGAAGTGTCTGTGGGG------------------------------AGAAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGCTTGATTCAAGG--TT--AA--CAGGAAT---CTCTCTAT--GTACGACCTACTTTACCTGTCTCTTCCAGTTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205591 182 + 4569836 GTCTCATC-CTTTGGCTGTATGTAGACTGGGAAGTGTCTGTGGG-------------------------------AGGAGCATGATGTTGATATATTCACAGTGGTGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTTTGATTCAGGG--CT--AA--CAGGCAT---CTCTCTAT--GTGAGACCTACTTAACCTGTCTCTTCCAGTTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155686 181 - 159171411 ACCTCCTT-CTTTGGCTGTATGTAGATTGGGAAGTGTCTGCGGGG------------------------------AAAAGTGTGACGCTCATATATTTATAGTGACCAAAGGAACCCATGTCTGTGCCCAAAACTGCTCAGTCACC--------AAAGTCTGATTCAAGA--CT--AA--CAGGTA-----TCTCTCT--GTAAAACACACACCACCTGTGTCTCTCAGTTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1875945 213 + 3513951 GCCTCATC-CTTTGGTTGTATGTAGACTGCAAAGCATCTGTGAGGAGATACTATTTCGTGAGGGATAATTTTCACAAAGCCATGATGCTGGTATATTCACAGTGATGAATTGAATCCATGCTTGGGACCAAGACTGTTTACCCACC--------AAAGTCTGATTCAATA--CT--AA--CAGGTAT---CTCTCTCT--GTACAGCTTACTTTACCTGTTTCTTCCAGTTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11466 183 - 4077172 GCCTCATC-CTTTGGCTGTATGTAGACTGGAAAGCGTCTGTGAGG------------------------------AGAAGCATGATGCTGATATATTCACAGTAATGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTCTGATTCGATA--CT--AA--CAGGCAT---CTCTCTCT--GTACAGCTTACTTTACCTGTCTCTTCCAGTTCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5208 183 - 94492 GCCTAATC-CTTTGGCAGTATGTGGACTGGACAGCGTCTGTGAGG------------------------------AGAAGCATGATGCTGATATATTCACAGTGATGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACC--------AAAGTCTGATCTAATA--CT--AA--CAGGCAT---CTCTCTCT--GTACAGCTTACTTTACCTGTCTCTTCCAGTTGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869255 183 + 28711273 GCCTGTTG-CTTGTGCTGTATGTAGATTGGGAGGGGTCTTTGGGG------------------------------AGAAGTGGGGTGCTGATATGTGCAGATTGTTGAATTGAATCCATGCTTTGGTCCAAGTTTGTTCACCTGCA--------AAAGCCAGAGCCAACA--CT--AA--CAGGCAT---CTCTTCCT--GTACAACCTACTGCAGGGGTGTTTCCCAGTTCT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134414 147 - 122082543 --TTAATC-TTTTATCTGTACTTAGCTTATGAGGTATCTCTG---------------------------------A-----ATGATAATGCTACATTCACTGTGA-------------------AAACCAGGCTGGCTCTCTCTCCTTTTTCACAAATCCTTACTTCAGA--TT--AGCCCAGGGAT---CTGTTTAT-------------------CATCTCTTCCACCTAT i mm10.chr11 C 0 I 4 s canFam3.chr9 21497845 190 + 61074082 GCCCAGTTAGTTTGGTTGCATGCAGACTGGGAA-TATCCCTGAGGTGAA--------------------------GGGAGCTTGATGGTGATATGTTCATAGTGATGAATTGCAACCATGCTGGAGCCCGAGTCTGTTTCCCCA-A--------AGTGCCTCATTCCAGACGCC--CG--CAGGCAT---CTGTCTCTTGGAGCACCCTACCTCGTTTGCATAGGGCAGTGCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 551601 187 - 852752 gccTCTGT-CTTTGGCTGTATTTAGATTGGCAAGTGCTTCTGGGG------------------------------TGT-GCATGATGCTGATATTTTCACAGTGAAAAATTGGATCCCTGCCTGGAACTAACTTTGTTCACCCACA--------GAAGCCTGATTCAAGG--CTGCAA--CAGGCATTTGTTTTCTCT--GTTGTAACAACTCCTCTGGCAAATCCCTATTTT i dasNov3.JH570468 I 4141 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=482388.000000 s hg38.chr17_JH159148v1_alt 42288 58 + 88070 ATAAAAGCCTCTTGGGAAGAGGGTGTTCAGCACAATGTGTGCTATGTGGCAGAGCAGA s panTro5.chr17 16353279 58 + 83181570 ATAAAAGCCTCTTGGGAAGAGGGTGTTCAGCACAATGTGTTCTATGTGGCAGAGCAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258027 58 + 83442489 ATAAAAGCCTCTTGGGAAGAGGGTGTTCAGCACAATGTGTTCTATGTGGCAGAGCAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105204 58 + 4267968 ATAAAAGCCTCTTGGGAAGAGGGTGTTCAGCACAATGTGTTCCATGTGGCAGAGCAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091726 57 - 2193130 ATAAAAGCCTCTTGGGAAGAGGGTGTTC-GAATAATGTGTTCCATGTGGCAGAGCAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2116890 58 + 10377808 TTGAATGTCACTTGGGAAGAGGGTGTCTGGCAGAGTGTGTTCCATGTGGCAGAGCAGA i macNem1.NW_012014910v1 T 16748 T 7525 s cerAty1.NW_012006043v1 1998204 55 - 8458610 ---AAAGCCACTTGGGAAGAGGGTGTTCGGCACAATGTATTCCATGTGGCAGAGCAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936812 58 + 75148670 ACAAAAGCCACTTGGGAAGAGGGTGTTCGGCACAATGTGTTCCATGTGGCAGAGCAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182741 58 + 4244037 ACAAAAGCCACTTGGGAAGAGGGTGTTCGGCACAATGTATTCCATGTGGCAGAGCAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205773 57 + 4569836 ACAAAAGCCTCTT-GGAAGAGGATGTTTGGCACAATGTGTTCCACGTGGCAGAGCAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155867 58 - 159171411 ATCAAAATCACCTGGGAAGAGGGTGTTTGGCACAGTGTGTTCTATGTGGCAGAGCAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876158 57 + 3513951 AT-GAAGCCTCTTGGAAAGAGGGGGTTCAGCACAACGTGCTCTAGGAGGCAGTGTGGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11649 57 - 4077172 AG-GAAGCCTCTTGGAAAGAGGGGGTTCAGCACAATGTGCTCCAGGTGGCAGTGTGGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5391 57 - 94492 AT-GAagcctcttggaaagagggctttcagcacaatgtgctccAGGTGGCAGAGTGGA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869438 58 + 28711273 ATCCATGACACCTGGGAAGAGGATGTTTTTTACAATCTATTCCATGTGGTAAAGCAGA i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134565 56 - 122082543 ACCAAAGTCACCTGGGAGGAAGATATCTGGCACCATATGCTCCATAT--CAGGGTAGA i mm10.chr11 I 4 C 0 s canFam3.chr9 21498035 58 + 61074082 TTCAAAGAAACTTGGGTGGAGGACATCTGGCATCATGTCTTCCATATGTCAAGGCCGA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 551788 58 - 852752 ATCAAAAATATTTGGGTAGATGTTGTTTAGCATAATCTCTTCCACATGGCTAATCAGA i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=114073.000000 s hg38.chr17_JH159148v1_alt 42346 18 + 88070 GCCAAAGCAAACACGTAG s panTro5.chr17 16353337 18 + 83181570 GCCAAAGCAAACACGTAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258085 18 + 83442489 GCCAAAGCAAACACGTAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105262 18 + 4267968 GCCAAAGCAAACACATAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091783 18 - 2193130 GCCAAAGCAAACAGGTAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998259 18 - 8458610 GCCAAAGCAAACAGGTAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936870 18 + 75148670 GCCAAAGCAAACAGGTAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182799 18 + 4244037 GCCAAAGCAAACAGGTAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205830 18 + 4569836 ACCAAAGCAAACAGGTAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155925 18 - 159171411 ATTGAAGTAGTTGAGTAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876215 18 + 3513951 ACCAAAGCAGACAGGTAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11706 18 - 4077172 ACCAAAGCAGACAGGTAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5448 18 - 94492 ACCAAAGCAGACAGGTAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869496 18 + 28711273 AAGAAAGCATATGGACAG i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22134621 18 - 122082543 CTTAGAGGAGTAATATGG i mm10.chr11 C 0 I 12180 s canFam3.chr9 21498093 17 + 61074082 -ATCGAGCAGGTGGATAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 551846 18 - 852752 AGCAAAACAAGGAGACAG i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1053988.000000 s hg38.chr17_JH159148v1_alt 42364 182 + 88070 AAAGAGGAGGGGTTCACTGGAATTCACAAAGCATCAAGCAATCTACGTG--CTGCggtgaccattcacc-----ctgatttgtctgggactgagg-ggcttaccagcatgagaatg---tgggactGGG--AATTACTGTGACATT---ACT----GCTTGAGGTCCAGGCAAAGCAATATGAGCT--GTGGCTCTAGCCCTAA s panTro5.chr17 16353355 182 + 83181570 AAAGAGGAGGGGTTCACTGGAATTCACAAAGCATCAAGCAATCTACGTG--CTGCggtgaccattcatc-----ctgatttgtctgggactgagg-ggcttaccagcatgagaatg---tgggactGGG--AATTACTGTGACATT---ACT----GCTTTAGGTCCAGGCAAAGCAATATGAGCT--GTGGCTCTAGCCCTAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258103 182 + 83442489 AAAGAGGAGGGGTTCACTGGAATTCACAAAGCATCAAGCAATCTATGTG--CTGCggtgaccattcatc-----ctgatttgtctgggactgagg-ggcttaccagcatgagaatg---tgggactGGG--AATTACTGTGACATT---ACT----GCTTTAGGTCCAGGCAAAGCAATATGAGCT--GTGGCTCTAGCCCTAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105280 182 + 4267968 AAAGAGGAGGAGTTCACTGGAATTCACAAAGCATCAAGCAATCTACGTG--Ctggggtgaccgttcatc-----ctgatttgtctgggactgagg-ggcttatcagcatgagaatg---tgggactGGG--AATTACAGTGACATT---ACT----GCTTTAGGTCCAGGCAAAGCAATATGAGCT--GTGGCTCTAGCCCTAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091801 182 - 2193130 AAAGAGGAGGAGTTCACTGGAATTCACAAAGCATCAAGCAATCTACGTG--Ctggggtgaccattcatc-----ctgatttgcctgggactgaag-agcttaccagcatgagagtg---tgggactggg--aattactgtgacata---act----gctttaggtccaggcaaagcagtatgagct--gTGGCTCTAGCCCTAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998277 182 - 8458610 AAAGAGGAGGAGTTCACTGGAATTCTCAAAGCATCAAGCAATGTACCTG--CTgggtcgaccattcatc-----ctgatttgcctgggactgaga-ggcttactaacatgagaatg---tgtgactggg--aattactgtgacata---act----gctctaggtccaggcaaagcagtatgagct--gTGGCTCTAGCCCTAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64936888 182 + 75148670 AAAGAGGAGGAGTTCACTGGAATTCTCAAAGCATCAAGCAATCTACCTG--Ctggggcgaccattcatc-----ctgatttgcctgggactgagg-ggcttactaacatgagaatg---tgcgactggg--aattactgtgacata---act----gctctaggtccaggcaaagcagtatgagct--gTGGCTCTAGCCCTAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182817 182 + 4244037 AAAGAGGAGGAGTTCACTGGAATTCTCAAAGCATCAAGCAATGTACCTG--CTGgggcgaccattcatc-----ctgatttgcctgggactgaga-ggcttactaacatgagaATG---TGTGACTGGG--AATTACTGTGACATA---ACT----GCTCTAGGTCCAGGCAAAGCAGTATGAGCT--GTGGCTCTAGCCCTAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2205848 182 + 4569836 AAAGAGGAGGAGTTCACTGGAATTCATGAAGCATCAAGCAATCTACGTG--Ctggggtgaccattcatc-----ctgatttgcctgggactgagg-ggcttactaacatgagactg---tgggactggg--aattactgtgacata---act----gctgtaggtccaggcaaagcagtacgagct--gTGGCTGTAGCCCTAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46155943 173 - 159171411 AAA---GAGAAGTCCACTGGGATTTAGATAGCATCAAGCTATCTA-ATGCCCtggggtgaccattcatc-----ctgatttgtctgggagtgagg-ggcttaccaggaatagaatg---ta------gg--actttctgtgacata---act----gctttagattgaggccaaccagcatgagct--gT-GTCTCAGCTCTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876233 152 + 3513951 AAAGAGGAGGAGTTCACTGGAATTCACAAAGCCTCAAGCAATCTACATG--Ctggggtgagcattcatc-----ctgatttgcctgggtctgagg-ggcttaccagCAAGAAAATG---TAAGAGTGGG--AGTTACTGTGACATA---ACT------------TTG------------------------GCTCTAGCCCTAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11724 182 - 4077172 AAAGAGGAGGAGGTCACTGGAATTCACAAAGACTCAAGCAATCTAAGTG--CTGgggtgagcattcatc-----ctgatttgcctgggactgagt-ggcttaccagcatgagaATG---TAAGAGCGGG--AATTACTGTGACATA---ACT----GCTCTAGGTCCAAGAAAAGCAGTCTGAGCT--TCGGCTCTAGCCCTAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5466 182 - 94492 AAAGAGGAGGAGTTCACTGGAATTCACAAAGTCTCAAGTAATCTACGTG--Ctggggtgagcattcatc-----ctgatttgcctgggactgagg-agcttaccagTATGAGAATG---TAAGAGTGGG--AATTACTGTGACATA---ACT----GCTCTAGGTCCAGGAAAAGCAGTCTGAGCT--GCGGCTCTAGCCCTAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869514 155 + 28711273 AAGGATAAGTAGCATACTGGGAGTAACAAGGGTTCA----------GTG--TGagggtgaca--tcatc-----ttgattagcctg-----------gcttacaaagatgagaaag---tg------gg--agcttctgtgatatg---act----gccatagatccaggcaaaccaggatgagtt-ggtgacTTGTGTTCTAT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146819 179 - 122082543 AATGAaaacaagcaaac--gaaggaacaaacaaacaaacaCCCAGCACT--TAGGAATAAGCAGACATC-----AGGGGATGTGTGGG--------------TGAGCATGAGTCTTGACTCTGACTGGGGCAGCTCCTGGGGTAGATGTACTTTTAGCTTTAGAGCCAGACAAACTGGAGTGGGCAAGATGACTCCAGTGC--A i mm10.chr11 I 12180 C 0 s canFam3.chr9 21498110 151 + 61074082 AAACAGGACTAAACCA--------------GCATCCATGAACATACTTC--CTg-agtgaccagcagtcctgctctgatttacccagaaatgggt-gttttccc------aggccg---tg------gg--ccgttcagtggtata---agt----g----------gggcagtttgggatgagtc-ggtgactctCGTCCTAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 551864 161 - 852752 AAGAAGAAGAATCACCCTGGAATTCAGAAAGTTTCAATTAAT----ACC--CTGGG--GATCTACCATC-----CTTGTTTCACTAGGGCTGTGGTTTCCTCACGATATGGGGCTT---TG------GG--GATCA---------A---ACT----TGGTCTGGTTCAGGCAAACCAG-ATGAGAT--TCCAGtctagtcctga i dasNov3.JH570468 C 0 I 61 e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=130586.000000 s hg38.chr17_JH159148v1_alt 42546 27 + 88070 TCCAGGTTACTGGCA---------------------CAATCATTGCCA--------------- s panTro5.chr17 16353537 27 + 83181570 TCCAGGTTACTGGCA---------------------CAATCATTGCCA--------------- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258285 27 + 83442489 TCCAGGTTACTGGCA---------------------CAATCATTGCCA--------------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105462 27 + 4267968 TCCAGGTTACTGGCA---------------------CAATCATTGCCA--------------- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2091983 27 - 2193130 TCCAGGTTGCTGGCA---------------------CAATCATTGCCA--------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998459 27 - 8458610 TCCAGGTTACTGGCA---------------------CAATCATTGCCA--------------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937070 27 + 75148670 TCCAGGTTACTGGCA---------------------CAATCACTGCCA--------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2182999 27 + 4244037 TCCAGGTTACTGGCA---------------------CAATCATTGCCA--------------- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206030 27 + 4569836 TCCAGGTTACTGACA---------------------CAGTCATTGCCA--------------- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156116 27 - 159171411 TCCTGGTTACCAGCA---------------------CAGTCCGTGCCA--------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876385 27 + 3513951 CCCAGGCTACTGGGA---------------------CGGTCATTGGCA--------------- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11906 27 - 4077172 CCCAGGCTACTGACA---------------------TGGTCATTGACA--------------- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5648 27 - 94492 CCCAGGCTACTGGCA---------------------CGGTCATTGGCA--------------- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869669 26 + 28711273 CCCCCGGTACCATCA---------------------GAATTAA-GTTA--------------- i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22146998 48 - 122082543 CAGGGGCTGTCTGCAGCATCAAGGATCTTAGACTGGTGATCTTTCCCA--------------- i mm10.chr11 C 0 T 12303 s canFam3.chr9 21498261 50 + 61074082 CCTTGTTAACCAGCAGAGTGAGT-------------TATTTAATGACACTGACTCCACAGTTA i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 552025 61 - 852752 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=-109788.000000 s hg38.chr17_JH159148v1_alt 42573 53 + 88070 TT------------tctctgtctctgtctctg----------tctc------tgtctctgtctctgtctctctctctc--------------------------------------------tct s panTro5.chr17 16353564 95 + 83181570 TTTCTTtgtctctgtctctgtctctgtctctg----------tctc------tgtctctgtctctgtctctctctctctctctgtctctgtctctgtctc--------------tctctctttct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258312 119 + 83442489 TTTCTTtgtctctgtctctgtctctgtctctgtctctctctctctc------tgtctctgtctctgtctctctctctctctctgtctctgtctctctctctgtctctgtctctgtctctctctct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105489 61 + 4267968 TTtctctgtctctgtctctgtctctgtctctg----------tctc------tgtctctgtctctgtctctctc------------------------------------------------tct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092010 28 - 2193130 TT----------------------------------------tctc------tgtctctgtctctctctctctc--------------------------------------------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998486 26 - 8458610 TT------------tctctgtctctgtctctc----------tctc------------------------tc----------------------------------------------------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937097 44 + 75148670 TT------------tctctgtctctgtctctg----------tctc------tgtctctgtctctgtctctc----------------------------------------------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183026 49 + 4244037 TT------------tctctgtctctgtctctg----------tctc------tgtctctgtctctgtctttctc------------------------------------------------tct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206057 28 + 4569836 TT------------tctctgtctctgtctctg----------tctc------tg----------------tc----------------------------------------------------- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156143 5 - 159171411 TT----------------------------------------TCT-------------------------------------------------------------------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876412 5 + 3513951 TC----------------------------------------TCT-------------------------------------------------------------------------------- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11933 8 - 4077172 tc----------------------------------------tct--------------------------ctc--------------------------------------------------- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5675 14 - 94492 tc----------------------------------------tctc--------------------tctcgctc--------------------------------------------------- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869695 51 + 28711273 CT--TAGGTCACGGACGGAGCCTTTTTTTCCT----------TCTC------TGTCTTTCTTACTTTTT-------------------------------------------------------- i otoGar3.GL873537 C 0 T 8013 s mm10.chr11 22134743 42 - 122082543 ------------CTTCTGTATTACTATCTCAT----------TTTG------CTATCCTTTCTCTATTCT------------------------------------------------------- i mm10.chr11 T 12303 C 0 s canFam3.chr9 21498311 53 + 61074082 --------CTGTTttctcttcctcccttcccc----------tccccccgtgcattcccttctcctcctct------------------------------------------------------ i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 552025 61 - 852752 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=48885.000000 s hg38.chr17_JH159148v1_alt 42626 16 + 88070 ctctctctgtctctCT s panTro5.chr17 16353659 16 + 83181570 ctctctctgtctctCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258431 16 + 83442489 ctctctCTGTCTCTCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105550 16 + 4267968 ctctctctgtctctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092038 1 - 2193130 ---------------t i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998512 13 - 8458610 ---tctctctctctct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937141 13 + 75148670 ---tctctctctctTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183075 16 + 4244037 ctgtctctctctctCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206085 13 + 4569836 ---tctctctctCTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156148 3 - 159171411 -------------TCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876417 6 + 3513951 ----------CTCTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11941 13 - 4077172 ---tctctctctctct i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5689 13 - 94492 ---tctctctctctTT i aotNan1.NW_018505111v1 C 0 C 0 s mm10.chr11 22134785 16 - 122082543 CTTTCTCAGTTGCTTT i mm10.chr11 C 0 C 0 s canFam3.chr9 21498364 16 + 61074082 tttcccttgtctttct i canFam3.chr9 C 0 I 5841 e dasNov3.JH570468 552025 61 - 852752 I e otoGar3.GL873537 22869746 8013 + 28711273 T e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=15498.000000 s hg38.chr17_JH159148v1_alt 42642 3 + 88070 GT-----T s panTro5.chr17 16353675 3 + 83181570 GT-----T i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258447 3 + 83442489 GT-----T i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105566 3 + 4267968 GT-----T i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092039 3 - 2193130 GT-----T i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998525 3 - 8458610 GT-----T i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937154 3 + 75148670 GT-----T i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183091 3 + 4244037 GT-----T i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206098 3 + 4569836 GT-----T i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156151 8 - 159171411 GTATTTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876423 3 + 3513951 GT-----T i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11954 3 - 4077172 GT-----T i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5702 3 - 94492 GT-----T i aotNan1.NW_018505111v1 C 0 C 0 s mm10.chr11 22134801 3 - 122082543 TC-----T i mm10.chr11 C 0 C 0 s canFam3.chr9 21504221 3 + 61074082 gt-----c i canFam3.chr9 I 5841 C 0 e dasNov3.JH570468 552025 61 - 852752 I e otoGar3.GL873537 22869746 8013 + 28711273 T e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=31875.000000 s hg38.chr17_JH159148v1_alt 42645 3 + 88070 TTC s panTro5.chr17 16353678 3 + 83181570 TTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258450 3 + 83442489 TTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105569 3 + 4267968 TTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092042 3 - 2193130 TTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998528 3 - 8458610 TTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937157 3 + 75148670 TTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183094 3 + 4244037 TTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206101 3 + 4569836 TTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156159 3 - 159171411 TTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876426 3 + 3513951 TTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11957 3 - 4077172 TTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5705 3 - 94492 TTC i aotNan1.NW_018505111v1 C 0 C 0 s mm10.chr11 22134804 3 - 122082543 TTC i mm10.chr11 C 0 C 0 s canFam3.chr9 21504224 3 + 61074082 ttc i canFam3.chr9 C 0 T 23154 s dasNov3.JH570468 552086 3 - 852752 ttc i dasNov3.JH570468 I 61 C 0 e otoGar3.GL873537 22869746 8013 + 28711273 T e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=7710.000000 s hg38.chr17_JH159148v1_alt 42648 1 + 88070 A s panTro5.chr17 16353681 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258453 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105572 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092045 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998531 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937160 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183097 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206104 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156162 1 - 159171411 A i calJac3.chr5 C 0 C 0 s saiBol1.JH378271 1876429 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11960 1 - 4077172 A i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5708 1 - 94492 A i aotNan1.NW_018505111v1 C 0 C 0 s mm10.chr11 22134807 1 - 122082543 T i mm10.chr11 C 0 I 8 s canFam3.chr9 21481073 1 + 61074082 A i canFam3.chr9 T 23154 C 0 s dasNov3.JH570468 552089 1 - 852752 a i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22869746 8013 + 28711273 T e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=452088.000000 s hg38.chr17_JH159148v1_alt 42649 74 + 88070 GTGAGGGAATTAGGTGAGTTGAGATGATATCTGATTCCTCTTTGAGGTTTACCAttgtttaaa-actttttaaat s panTro5.chr17 16353682 74 + 83181570 ATGAGGGAATTAGGTGAGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCGTTGTTTAAA-ACTTTTTAAAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258454 74 + 83442489 ATGAGGGAATTAGGTGAGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCGTTGTTTAAA-ACTTTTTAAAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105573 74 + 4267968 ATGAGGGAATTAGATGAGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCATTGTTTAAA-ACTTTTTAAAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092046 73 - 2193130 GTGAGGGAATTAGATGAGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCA-TGtttaaa-actttttaaat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998532 73 - 8458610 ATGAGGGAATTAGATGAGTTGAGATGATATCTGATTTCTCTTTGAGGTCTACTA-TGTTTAAA-ACTTTTTAAAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937161 73 + 75148670 ATGAGGGAATTAGATGCGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCG-TGTTTAAA-ACTTTTTAAAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183098 73 + 4244037 ATGAGGGAATTAGATGAGTTGAGATGATATCTGATTTCTCTTTGAGGTCTACTA-TGTTTAAA-ACTTTTTAAAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206105 73 + 4569836 ATGAGGGAATTAGATGAGTTGAGATGATATCTGATTCCTCTTTGAGGTCTACCA-TGTTTAAA-ACTTTTAAAAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5 46156163 74 - 159171411 ATGAAGGAATTAGTTGAGTTGAGATGACACCTGATTCATCTTGGAGTTGTAACA-TAGTTAAACATTATTTAGGT i calJac3.chr5 C 0 N 0 s saiBol1.JH378271 1876430 73 + 3513951 ATGAGGAGATTAGATGAGTTCAGATGATACCTGATTTCTCTTTGAGGTCTTCCA-TGTTTAAA-ACTTTTTAAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 11961 72 - 4077172 ATGAGGAAATTAGATGAGTTCAGATGATACCTGATTTCTCTTTGATTTTTTCCA-TGTTTAAA-ACTTTTTAGT- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5709 72 - 94492 GTGAGGAAATTAGATG-GTTCAGATGATACCTGATTTCTCTTTGAGGTCTTCCA-TGTTTAAA-ACTTTTTAAGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861733 72 + 28711273 ATGAGGGAATTAGATTAGTTGCAGTGATACCTGATTTGCCTTTGTGATCTAACA-TA-TTAAC-ATTTTGGGGGT i otoGar3.GL873537 T 8013 I 2 s mm10.chr11 22134816 71 - 122082543 ATGGGTTAA--AAATAAGTTGAAATGGTTCCTAATTTGTTTGTGGCGGCAAATG-TATTTAAA-ACATTTGGAAG i mm10.chr11 I 8 I 1 s canFam3.chr9 21481074 41 + 61074082 TTGAAGGGGT------AGTCTTGGTGATAG-TGCTCCTTTTTATAAAT--------------------------- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 552090 66 - 852752 -tgagggagttagattagatcac---atacttgacgtttctttgaattctaaca-tATTTTAA-ACTAATAT--- i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=951770.000000 s hg38.chr17_JH159148v1_alt 42723 165 + 88070 tataccattcatttcagaagag-tgcaaatt-atgaa-ttccaacttgatataatattacattataaatacatctaagtccccattaccagtt---tacaaaatagaaattaattccattccctccaaattatatctttttacttatctccaaaggtagctagtcactc--ta s panTro5.chr17 16353756 165 + 83181570 TATACCATTCATTTCAGAAGAG-TGCAAATT-ATGAA-TTCCAACTTGATATAATATTACATTATAAATACATCTAAGTCCCCATTACCAGTT---TACAAAATAGAAATTAACTCCATTCCCTCCAAATTATATCTTTTTACTTATCTCCAAAGGTAGCTAGTCACTC--TA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258528 165 + 83442489 TATACCATTCATTTCAGAAGAG-TGCAAATT-ATGAA-TTCCAACTTGATATAATATTACATTATAAATACATCTAAGTCCCCATTACCAGTT---TACAAAATAGAAATTAATTCCATTCCCTCCAAATTATATCTTTTTACTTATCTCCAAAGGTAGCTAGTCACTC--TA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105647 166 + 4267968 TATACCATTCATTTCAGAAGAG-TGCAAATT-ATAAATTTCCAACTTGATATAATATTACATTATAAATACATCTAAGTCCCCATTACCAGTT---TACAAAATAGAAATTAATTCCATTCCCTCCAAATTATATCTTTTAACTTATCTCCAAAGGTAGCTAGTCACTC--TA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092119 166 - 2193130 tatacagttcatttcagaagag-tgcaaatt-atgaatttccaacttgatataatattactttgtaaatacatctaagtccccattaccagtt---tacaaaatagaaattaattccattccctccaaattatatctttttacttatctccaaaggtagctagtcactc--ta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998605 166 - 8458610 TATACCATTCATTTCAGAAGAA-TGCAAATT-ATTAATTTCCAGCTTGATACAATATTACATTGTAAATACATCTAAGTCCCCATGACCAGTT---TACAAAACAGAAATTAATTCCATTCCATCCAAATTATATCTTTTTACTCATCTCCAAAGGTAGCTAGTCACTC--TA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937234 166 + 75148670 TATACCATTCATTTCAGAAGAA-TGCAAATT-ATTAATTTCCAGCTTGATACAATATTACATTGTAAATACATCTAAGTCCCCATGACCAGTT---TACAAAACAGAAATTAATTCCATTCCATCCAAATTATATCTTTTTACTCATCTCCAAAGGTAGCTAGTCATTC--TA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183171 166 + 4244037 TATACCATTCATTTCAGAAGAA-TGCAAATT-ATTAATTTCCAGCTTGATACAATATTACATTGTAAATACATCTAAGTCCCCATGACCAGTT---TACAAAACAGAAATTAATTCCATTCCATCCAAATTATATCTTTTTACTCATCTCCAAAGGTAGCTAGTCACTC--TA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206178 166 + 4569836 TATACCATTCATTTCAGAAGAA-TGCAAATT-ATTAATTTCCAACTTGATACAATATTACATTGTAAATACATCTAAGTCCCCATGACCAGTT---TATGAAATAGAAATTAATTCCATTCCATCCAAATTATATCTTTTTACTCATCTCCAAAGGTAGTCCGTCACTC--TA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1876503 161 + 3513951 TATACCATTTGTTTCAGAAGAA-TGCAAATT-ATTAATTCATATCTTCAT---ATATTATATTGTAAATACATCTAGGTCTCCATTACCAGTT---TACAAAATAGAAATTAATTCAATTCCCTCCAA--TATATTTTCTCATTTGTCTTCAAAGGTAGCTAGTCACTC--TA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12033 164 - 4077172 TATACCATTTGTTTCAGAAGAA-TGCAAATT-ATTAATTCGTATCTTCATATAATATTATATTGTAAATACATCTAGGTCTCCATTACCAGTT---TACAAAATAGAAATTAATTCAATTCCCTCCAA--TATATCTTTTTATTTGTCTTCCAAGGTAGCTAGTCACTC--TA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5781 163 - 94492 TATACCATTTGTCTCAGAAGAA-TGCAAAGT-ATTAATTC-TACCTTCAAATAATATTATATTGTAAATACATCTAGGTCTCCATTACCAGTT---TACAAAATAGAAATTAATTCAATTCCCTCCAA--TATATCTTCTTATTTGTCTTCAAAGGTAGCTAGTCACTC--TA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861807 166 + 28711273 TATACCACTTTTTAAAAAAGAAGCGCAAATTAACTAATTTCCAGCTATAGAGAATATCACAAAGTGAATACATCCCTGTCACTATAACCAAGT---TA--GGATGTAAATTAATTCCCCTCCTTCCAAATTACATCCTCTTACTCATCCCAATAGGTCCCTAATCTCTC--TA i otoGar3.GL873537 I 2 C 0 s mm10.chr11 22134888 162 - 122082543 TCTACTGTACATATTGAAAGAG--ACAAGCT-ATG---TTATGG-TGGAAAGGATATGACAAAATAAACATGCC--AGTCTC-ATTACTAATCAGGTAAGAAGTACAAATTTATCTAATTTT-TACAAACAATACCCTCTCACTATTTCTCAAGGAGAGATGATCACTTTGTA i mm10.chr11 I 1 C 0 s canFam3.chr9 21481115 149 + 61074082 TATAATAC-------------A-TTAAAATC-GATAATTTCAAATCTGATAGAATATCACCGAGTGAACCC--CCATGTCGCTATTACCAGGT---TAACAAAAAGAACTTAATTTAATCCCCTTCAAATTATAATCCTTA--TTATTCCCAAAGGTATGTATGTATTC--TA i canFam3.chr9 C 0 I 38610 s dasNov3.JH570468 552156 107 - 852752 ------------------------------------------------------TCTCCCAAAGATAACACATCCATGTCACTATTATGAGGT---TTTTAAACAGAACTTAAGCCCACGGTCTCAAA---TTATGCTaccactcacctcccaaga----ttattactg--ta i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=432624.000000 s hg38.chr17_JH159148v1_alt 42888 76 + 88070 tcaagttttaatcctgtaggtcagttttgtttttttctttgacttttatgtaaataaaa-attatagaatttgctt---c s panTro5.chr17 16353921 76 + 83181570 TCAAGTTTTAATCCTGTAGGTCAGTTTTGGTTTTTTCTTTGACTTTTATGTAAATAAAA-ATTATAGAATTTGCTT---C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258693 75 + 83442489 TCAAGTTTTAATCCTGTAGGTCAGTTTTGG-TTTTTCTTTGACTTTTATGTAAATAAAA-ATTATAGAATTTGCTT---C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105813 76 + 4267968 TCAAGTTTTAATCCTGTAGGTCAGTTTTGGTTTTTTCTTTGACTTTTATGTAAATAAAA-ATTATAGAATTTGCTT---C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092285 76 - 2193130 tcaagttttaatcctgtaggtcagttttggctttttctttgacttttatgtaaataaaa-attacagaatttgctt---c i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998771 76 - 8458610 TCAAGTTATAATCCTGTAGGTCAGTTTTGGATCTTTCTTTGACTTTTATGTAAATAAAA-ATTATAGAATGTGCTT---C i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937400 75 + 75148670 TCAAATTATAATCCTGTAGGTCAGTTTTGGATCTTTCTTTGAC-TTTATGTAAATAAAA-ATTATAGAATGTGCTT---C i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183337 76 + 4244037 TCAAGTTATAATCCTGTAGGTCAGTTTTGGATCTTTCTTTGACTTTTATGTAAATAAAA-ATTATAGAATGTGCTT---C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206344 76 + 4569836 TCAAGTTGTAATCCTGTAGGTCAGTTTTGGATCTTTCTTTGACTTTTGTGTAAATAAAA-ATTATAGAATGTACTT---C i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1876664 70 + 3513951 TCAAGTTATAATCCTGAAGGTCAGTTTTGGCTTTTTCTTTGACTTGTATGT------AA-ATTATAGAATTTGCTT---C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12197 76 - 4077172 TCAAGTTATAATCCTGAAGGTCAGTTTTGGCTTTTTCTTTGACTTGTATGTAAATACAA-ATTATAGAATTTGCTT---C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 5944 76 - 94492 TCAAGTTATAATCCTGAAGGTCAGTTTTGGCTTTTTCTTTGACTTGTATGTAAATAAAA-ATTATAGAATTTGCTT---C i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861973 74 + 28711273 TTGATTTGTAACACTGTAGATACATTTTGAGGTGTT-TTTGACATTTACGTAAAAGAAA-A----AAAATTCAACTGGCC i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22135050 67 - 122082543 TCAAGTT----TACTTATGGCCAG---TGAAGCCAACTTTGGCGTCTTTGCAAATAAAA-GTTAT--AATTGATTT---C i mm10.chr11 C 0 C 0 s dasNov3.JH570468 552263 74 - 852752 ctaacttgcaa-attgcatgaaagttatgactgtttc--tgacattgttttaagtgaaatactatagaattgactt---c i dasNov3.JH570468 C 0 I 6077 e canFam3.chr9 21481264 38610 + 61074082 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=28217.000000 s hg38.chr17_JH159148v1_alt 42964 5 + 88070 actgt s panTro5.chr17 16353997 5 + 83181570 ACTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258768 5 + 83442489 ACTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105889 5 + 4267968 ACTGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092361 5 - 2193130 actgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998847 5 - 8458610 AATGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937475 5 + 75148670 AATGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183413 5 + 4244037 AATGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206420 5 + 4569836 ACTGT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1876734 5 + 3513951 ATTGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12273 5 - 4077172 ATTGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6020 5 - 94492 ATTGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22862047 5 + 28711273 ACTGT i otoGar3.GL873537 C 0 C 0 s mm10.chr11 22135117 5 - 122082543 TCTAT i mm10.chr11 C 0 N 0 e canFam3.chr9 21481264 38610 + 61074082 I e dasNov3.JH570468 552337 6077 - 852752 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=20256.000000 s hg38.chr17_JH159148v1_alt 42969 4 + 88070 gttt s panTro5.chr17 16354002 4 + 83181570 GATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258773 4 + 83442489 GATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105894 4 + 4267968 GTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092366 4 - 2193130 attt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998852 4 - 8458610 GTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937480 4 + 75148670 GTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183418 4 + 4244037 GTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206425 4 + 4569836 GTTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1876739 4 + 3513951 GTTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12278 4 - 4077172 GTTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6025 4 - 94492 GTTT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22862052 4 + 28711273 CTTT i otoGar3.GL873537 C 0 I 5332 e canFam3.chr9 21481264 38610 + 61074082 I e dasNov3.JH570468 552337 6077 - 852752 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=119834.000000 s hg38.chr17_JH159148v1_alt 42973 20 + 88070 TTGGCATAATCAAAAGCAGC s panTro5.chr17 16354006 20 + 83181570 TTGGCATAATCAAAAGCAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258777 20 + 83442489 TTGGCATAATCAAAAGCAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105898 20 + 4267968 TTGGCATAATCAAAAGCAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092370 20 - 2193130 TTGGCATAATCAAAAGCAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998856 20 - 8458610 TTGGCATAATCAAAAGCAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937484 20 + 75148670 TTGGCATAACCAAAAGCAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183422 20 + 4244037 TTGGCATATTCAAAAGCAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206429 20 + 4569836 TTGGCATAATCAAAAGCAGC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1876743 20 + 3513951 TTGGCGTAATCAAaagcagc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12282 20 - 4077172 TTGGCATAATCAAAAGCAGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6029 20 - 94492 TTGGCATAATCAAAAGCAGC i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 21481264 38610 + 61074082 I e dasNov3.JH570468 552337 6077 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=811449.000000 s hg38.chr17_JH159148v1_alt 42993 139 + 88070 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTAATATTCCATGAGGGATAATTTTCGTGAAGCCATAGAGCGTAGGGAG-AATATATCTGAAACTCAAGAAATTT s panTro5.chr17 16354026 139 + 83181570 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTAATATTCCATGAGGGATAATTTTTGTGAAGCCATAGAGCATAGGGAG-AATATATCTGAAACTCAAGAGATTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258797 139 + 83442489 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTAATATTCCATGAGGGATAATTTTCGTGAAGCCATAGAGCGTAGGGAG-AATATATCTGAAACTCAAGAGATTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4105918 139 + 4267968 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTAATATTCCATGAGGGATAATTTTCATGAAGCCATAGAGCATAGGGAG-AATATATCTGAAACTCAAGAGATTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092390 139 - 2193130 AATTATAACACGGTCACTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTATATAAAGGAGTTAATATTTCATGATGGATAATTTTCATGAAGCCATAGAGTGTAGGGAG-AATATATCTGAAACTCAAGAGATTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1998876 139 - 8458610 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTGCTATTTCATGAGGGATAATTTTCATGAAGCCATAGAGTATAGGGAG-AATATATCTGAAACTCAAGAGATTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937504 139 + 75148670 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTGCTATTTCATGAGGGATAATTTTCATGAAGCCATAGAGTATAGGGAG-AATATATCTGAAACTCAAGAGATTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183442 139 + 4244037 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTAGATAAAGGAGTTGCTATTTCATGAGGGATAATTTTCATGAAGCCATAGAGTATAGGGAG-AATATATCTGAAACTCAAGAGATTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206449 139 + 4569836 AATTATAACCTGGTCATTTCATTTTGGATCCTTCATGTTAGCAGACCAGCAGGTACATAAAGGAGTTACTATTTCATGAGGGATAATTTTCATGAAGCCATAGAGTATAGGGAG-AATATATCTGAAACTCAAGAGATTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1876763 133 + 3513951 aattataacctggtca------tttggacccttcatgtcagaacagcagcagatagataaaggagttactatTTCATGAGGGATAATTTTCACAAAGCCATATAGTgtagggag-aatgtatctggaactcaagagattt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12302 133 - 4077172 AATTATAACCTGGTCA------TTTGGACCCTTCATGTCAGCACAGCAGCAGATAGATAAAGGAGTTACTATTTCATGAGGGATAATTTTCACAAAGCCATGTAGTgtagggag-aatgtatctggaactcaagagattt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6049 133 - 94492 AATTATAACCTGGTCA------TTTGGAACCTTCATGTCAGCATGGCAGCAGATAGATAAAGAAGTTACCATTTCATGAGGGATAATTTTCACAAAGCCATATAGTgtagggag-aatgtatctggaactcaagagattt i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39587347 135 - 61074082 AACTGTCACCTAGTCA-----TTTTGTACTCCTCATGTTAGTAGACGAGCATGTAGAGAAAAGGGTCACTGTTCGGTGATGGATAATTATCATAAAAAGGTAGACTGCAGAGAGAAAGGTATCTGGAACTCAGGAGATTT i canFam3.chr9 T 1647 I 2025 e dasNov3.JH570468 552337 6077 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=2078499.000000 s hg38.chr17_JH159148v1_alt 43132 400 + 88070 ACTATATATATTAAAGCATTACActgccattaaaaactatggcaaatcaagtggctgaagtttattttctcacagttctgaaggctaaaataaaggtgttggcaatgttgttttcatctgagggctgtgagggaaatatctgtttcaggtctctctccttgacctgtagatgtctatcttctccatgtgtctcttacatcatcttccctctatatgcatcctgtttgaatttcccctgtttatacagacaccagtcacattgaatcagaagcacaatttattccaatatgaccttatcttaccatcttgca-tttaagtgaccctatttGAATATGAGTTCTTGGGGACACAATTCGACCCATAACCTTGGAATATCTCGTAGTGTATCCATGCCCATTGA s panTro5.chr17 16354165 399 + 83181570 ACTATATATATTAAAGTATTACActgccattaaaaactgtggcaaatcaagtggctgaagtttattttctcacagttctgaaggctaaaataaaggtgttggcaatggtgttttcatctgagggctgtgagggaaatatctgtttcaggtctctc-ccttgacctgtagatgtctatcttctccatgtgtctcttacgtcatcttccctctatatgcatcctgtttgaatttcccctttttatacagacatcagtcacattgaatcagaagcacaatttattccaatatgaccttatcttaccatattgca-tttaaatgaccctatttGAATATGAGTTCTTGGGGACACAATTCGACCCATAACCTTGGAATATCTAGTAGTGTATCCATGCCCATTGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16258936 398 + 83442489 ACTATATATATTAAAGTATTACActgccattaaaaac--tggcaaatcaagtggctgaagtttattttctcacagttccgaaggctaaaataaaggtgttggcaatggtgttttcatctgagggctgtgagggaaatatctgtttcaggtctctctccttgacctgtagatgtctatcttctccatgtgtctcttacgtcatcttccctctatatgcatcctgtttgaatttcccctttttatacagacatcagtcacattgaatcagaagcacaatttattccaatatgaccttatcttaccatattgca-tttaaatgaccctatttGAATATGAGTTCTTGGGGACACAATTCTACCCATAACCTTGGAATATCTCGTAGTGTATCCATGCCCATTGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106057 400 + 4267968 ACTATATATATTAAAGTATTACActgccattaaaaactatggcaaatcaagtggctgaagtttattttctcacagttctgaaggctaaaataaaggtgttggcaatgttgttttcatctgagggctgtgagggaaatatctgttccaggtctctctccttgacctgtagatgtctatcttctccatgtgtctcttaagtcatcttccctctatatgcatcctgtttgaatttcccctttttatacagacatcagtcacattgaatcagaagcacaatttattccaatatgaccttatcttaccatattgca-tttaaatgaccctatttGAATATGAGTTCTTGGGGACACAATTCGACCCATAACCTTGGAATATCTCGTAGTGTATCCGTGTCCATTGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092529 400 - 2193130 ACTATATATATTAAAGTATTACActgccattaaaaactatggcaaatcaagtggctgaaatttattttcttacagttctgaaggctaaaataaaggtgtttgcaatgttgttttcatctgagggctgtgagggaagtatctgttccaggtctgtctccttgacctgtggatgtctatcttctccatgtgtctcttacatcatcttccctctatatgcatcctgtttgaatttcccctttttatacagacatcagtcatattgaatcagaagcacaatttattccaatatgatcttatcttaccatattgca-tttaaatgaccctatttGAATATGAGTTCTTGGGGACACAATTCGACCCATAACCTTGGAATATCTCGTAGTGTATCCATGCCCAGTGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999015 401 - 8458610 ACTATAtgtatttaagtattatactgccattaaaaactatggcaaatcaagtggctgaaatttattttctcacagttctgaaggctaaaatgaaggtgttggcaatgttgttttcatctgagggctgtgagggaagtatctgttccagatctctctccttgacctgtagatgtctatcttctccatgtgtgtcttacatcatcttccctctacatgcgtccgatctcaatttcccctttttatgcaggcatcagtcgtattgagtcagaggcacaatttattccaatatgaccttatattaccatattgcattttaaatgatcctatttgaatatgaattattgaggacacaattcaacccataacCTCAGAATATCTCAGAGTGTATCCATGCCCAGTGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64937643 401 + 75148670 ACTATATGTATTTAAGTATTATActgccattaaaaactatggcaaatcaagtggctgaaatttattttctcacagttctgaaggctaaaatgaaggtgttggcaatgttgttttcatctgagggctgtgagggaagtatctgttccaggtctctctccttgacctgtagatgtctatcttctccatgtgtgtcttacatcatcttccctctatatgcgtctggtctcaatttcccctttttatacagacatcagtcgtattgagtcagaggcacaatttattccaatatgaccttatgttaccatattgcattttaaatgaccctatttGAATATGAGTTATTGAGGACACAATTCAACCCATAACCTCGGAATATCTCAGAGTGTATCCATGCCCAGTGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183581 401 + 4244037 ACTATATGTATTTAAGTATTATActgccattaaaaactatggcaaatcaagtggctgaaatttattttctcacagttctgaaggctaaaatgaaggtgttggcaatgttgttttcatctgagggctgtgagggaagtatctgttccagatctctctccttgacctgtagatgtctatcttctccatgtgtgtcttacatcatcttccctctacatgcgtccgatctcaatttcccctttttatgcaggcatcagtcgtattgagtcagaggcacaatttattccaatatgaccttatattaccatattgcattttaaatgatcctatttGAATATGAATTATTGAGGACACAATTCAACCCATAACCTCAGAATATCTCAGAGTGTATCCATGCCCAGTGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206588 401 + 4569836 ACTGTAtgtatttaagtattatactgccattaaaaactatggcaaatcaagtggctgaaatttattttctcacagttctgaaggctaaaatgaaggtgatggcaatgttgttttcatctgagggctgtgagggaagtatctgttccaggtctctctctttgacctgtagatgtctatcttctccatgtgtctcttacatcatcttccctctatatgcgtcctgtctcaatttcccctttttatacagacatcagtcggattgaatcagaggcacaatttattccaatatgaccttatgttatcatattgcattttaaatgaccctatttGAATATGAGTTCTTGAGGACACAATTCAACCCATAACCTCGGAATATCTCAGAGTGTATCCACGCCCATTga i colAng1.NW_012122154v1 C 0 I 10 s saiBol1.JH378271 1876896 395 + 3513951 actggatatattaatttattacactgccatgaaaaactatga-----caagtggcttaaatttacgttctcacagttctgaaggctaaaattaaggtgttggcaatgctgttttcctctgagggctgtgagggaagtgcctgttccaggttgctctccttgacctgtggatatctatcttctccatatgtctcttacatcatcttccctctctatgcatcctgttttaattctcccttttcatacagacatcagtcatattgaatcagaggcacaatttatcccaatatcacctcatcttaacatattgca-tttaaatgaccctatttgaatataaattcttggggacacaattcaacccataacccgggagtatcttatagtgaatccatacacagtga i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12435 385 - 4077172 actggatatattaatttattatactgccatgaaaaactatga-----caagtggcttaaatttatgttctcacagttccgaaggctaaaattaaggtgttgggaatgctgttttcctctgagggctgtgagggaattgcctgttccaggtcgttctccttgacctgtggatatctatcttctctatgtgtctcttacatcatcttccctctctatgcatcctgttttaattcccccttttcatacagacatcagtcttattgaatcagaggca----------caatatcacctcatcttaacatattgca-tttaaatgaccctatttgaatataaattcttggggacacaattcaacccataaccctggagtatcttatagtgtatccatgcacagtga i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6182 395 - 94492 actggatatattaatttattacactgccattaaaaactatga-----caagtggcttaaatttatgttctcacagttctgaaggctaaaattaaggtgttggcaatgctgttttcctctgagggctgtgagggaagtgcctgttccaggtcgctctccttgacctgtggatatctatctcctccatgtgtctcttacatcatcttccctctctatgtgtcctgttttaattccctcttttcatacagacatcagtcatagtgaatcagaggcacaatttattccaatatcacctcatcttaatatattgca-tttaaatgacactatttgagtataaattcttggggacacaattcaacccataaccctggagtatcttatagtgtatccatgcacagtga i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 552337 6077 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=212210.000000 s hg38.chr17_JH159148v1_alt 43532 51 + 88070 TAAACACAAATGAGTAACAAAAGCAACCACAGTTGGACAATGGTGTAGTAA s panTro5.chr17 16354564 51 + 83181570 TAAACATAAATGAGTAACAAAAGCAACCACAGTTGGACAATGGTATAGTAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259334 51 + 83442489 TAAACATAAATGAGTAACAAAAGCAACCACAGTTGGACAATGGTATAGTAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106457 51 + 4267968 TAAACACAAATGAGTAACAAAAGCAACCACAGTTGGACAGTGGTATAGTAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092929 50 - 2193130 TAAACACAAATGAGTAACAAAAGC-ACCACAGTTGGACGATGGTATAGTAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999416 51 - 8458610 TAAACACAAATGAGTAACAAAAGCAACCACAGTTGGACAATGGTATAGTAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64938044 51 + 75148670 TAAACACAAATGAGTAACAAAAGCAACCACGGTTGGACAATGGTATAGTAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2183982 51 + 4244037 TAAACACAAATGAGTAACAAAAGCAACCACAGTTGGACAATGGTATAGTAA i manLeu1.NW_012106252v1 C 0 M 505 s saiBol1.JH378271 1877291 47 + 3513951 tacacacaaatgagtaacagaagcaaccacagctggacaatggttta---- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12820 47 - 4077172 cacacactaatgagtaacaaaagcaatcacagttgggcaatggtata---- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6577 47 - 94492 tgcacacaaatgagtaacaaaagcaaccacagttggacaatggtata---- i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 552337 6077 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=126392.000000 s hg38.chr17_JH159148v1_alt 43583 39 + 88070 GTAACTAGAGGGTAAGACCCATCAGGCAGGAAGTTCTGA s panTro5.chr17 16354615 39 + 83181570 GTAACTAGAGGGTAAGACCCATCAGGCAGGAAGTTCTGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259385 39 + 83442489 GTAACTAGAGGGTAAGACCCATCAGGCAGGAAGTTCTGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106508 39 + 4267968 GTAactagagggtaagacccatcaggcaggaagttctga i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2092979 39 - 2193130 GTAACTAGAGGGTAAGACCCATCAGGCAGGAAGTTCTGA i nomLeu3.chrUn_GL397460_1 C 0 T 7632 s cerAty1.NW_012006043v1 1999467 39 - 8458610 GTAACTAGAGGGTAAGACCCATCAGGCAGGAAGTTCTGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64938095 26 + 75148670 -----------GTA--TCCCATCAGGCAGGAAGTTCTGA i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1877338 39 + 3513951 gtagctagagagtcagatccattagtcaggaagttctga i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12867 39 - 4077172 gtcactagagactcagatccattagtcaggaagttctga i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6624 39 - 94492 gtaactagagggtcagatccattagtcaggaagttctga i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e dasNov3.JH570468 552337 6077 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=204649.000000 s hg38.chr17_JH159148v1_alt 43622 64 + 88070 GCTACTTCATCAGGCAATTATCTAAACTAACAGGAGTGCTGGCCAGTGATGAA-GGGAGTATAGA s panTro5.chr17 16354654 64 + 83181570 GCTACCTCATCAGGCAATTATCTAGACCAACAGGAGTGCTGGCCAGTGATGAA-GGGAGTATAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259424 64 + 83442489 GCTACCTCATCAGGCAATTATCTAGACCAACAGGAGTGCTGGCCAGTGATGAA-GGGAGTATAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106547 65 + 4267968 gctacctcatcaggcaattatctagaccaacaggagtgctggccagtggtgaaggggagtataga i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085386 63 - 2193130 gttactccttctggaaattatctagagcagcaaaagtgctggacagtggtgaa-ggaagtatag- i nomLeu3.chrUn_GL397460_1 T 7632 C 0 s cerAty1.NW_012006043v1 1999506 65 - 8458610 GCTACCTCATCAGGCAATTATCTAGACCAAGAGGAGTGCTGGTTAGTGGCGAAGGGGAATATAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64938121 65 + 75148670 GCTACCTCATCAGGCAATTATCTAGACCAAGAGGAGTGCTGGTCAGTGGTGAAGGGGAGTATAGA i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1877377 64 + 3513951 gctactccttcaggcaattatctacatcaaccagagtgctggccaggggtgaa-gggaatataga i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12906 64 - 4077172 gctactccttcaggcaattatctagatcaaccagagtgctggccaggggtgaa-gggaatataga i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6663 64 - 94492 gctactccttcaggcagttatctagatcaaccagagtgctggccaggggtgaa-gggaatataga i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e dasNov3.JH570468 552337 6077 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=210897.000000 s hg38.chr17_JH159148v1_alt 43686 56 + 88070 ACTGGCGGAAACTGATGGAGATTATGAATCTCAGAAGCACCCTATTACAGCAGTAG s panTro5.chr17 16354718 56 + 83181570 ACTGGCGGAAACTGATGGAGATTATGAATCTCAGAAGCACCCTATTACAGCAGTAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259488 56 + 83442489 ACTGGCGGAAACTGATGGAGATTATGAATCTCAGAAGCACCCTATTAAAGCAGTAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106612 56 + 4267968 actggcggaaactgatggagattatgaatctcagAAGCACCCTATTACAGCAGTAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2085449 56 - 2193130 acttttgataattaatggagattatgactgtcaggtgCATCCTATTATAGCAGCAG i nomLeu3.chrUn_GL397460_1 C 0 I 9350 s cerAty1.NW_012006043v1 1999571 56 - 8458610 ACTGGTGGAAACTGATGGAGATTATGAATCTCAGAAGCACCCTATTACAGCAGCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64938186 56 + 75148670 ACTAGTGGAAACTGATGGAGATTATGAATTTCAGAAGCACCCTATTACAGCAGCAG i chlSab2.chr16 C 0 C 0 s saiBol1.JH378271 1877441 56 + 3513951 actggtggaaactgatggagattataaatctcagAATTAACTCATTACAGCAGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 12970 56 - 4077172 actggtggaaaccgatggagattatgaatttcagAAGGACTCCATTACAGCAGCAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6727 56 - 94492 actggtggaaactgatggagattatgaatctcagAAGGAACCCATTACAGCAGCAG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 558414 55 - 852752 ACTGGTAGTAGAGGTGGAAGATTATGAAT-TCAGTTACATCTTTCCACAGCAGCAG i dasNov3.JH570468 I 6077 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=16263.000000 s hg38.chr17_JH159148v1_alt 43742 7 + 88070 ---------------------TTTCTTt s panTro5.chr17 16354774 7 + 83181570 ---------------------TTTCTTt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259544 7 + 83442489 ---------------------TTTCTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106668 7 + 4267968 ---------------------TTTCTTt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094855 7 - 2193130 ---------------------tctctct i nomLeu3.chrUn_GL397460_1 I 9350 C 0 s cerAty1.NW_012006043v1 1999627 7 - 8458610 ---------------------tttcttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64938242 7 + 75148670 ---------------------tttcttt i chlSab2.chr16 C 0 I 303 s saiBol1.JH378271 1877497 7 + 3513951 ---------------------TAtcttt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13026 7 - 4077172 ---------------------TAtcttt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6783 7 - 94492 ---------------------TATCTtt i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 558469 27 - 852752 TAACTGTAGCTTGTTTCACAGTCTCTT- i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=17513.000000 s hg38.chr17_JH159148v1_alt 43749 7 + 88070 tcccttc s panTro5.chr17 16354781 7 + 83181570 tcccttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259551 7 + 83442489 TCCCTTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106675 7 + 4267968 tcccttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094862 7 - 2193130 ttctttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999634 7 - 8458610 cttcttc i cerAty1.NW_012006043v1 C 0 I 100 s saiBol1.JH378271 1877504 7 + 3513951 tctcttc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13033 7 - 4077172 tctcttc i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 6790 7 - 94492 tctcttc i aotNan1.NW_018505111v1 C 0 I 7806 s dasNov3.JH570468 558496 7 - 852752 TTGCTTG i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=-13638.000000 s hg38.chr17_JH159148v1_alt 43756 3 + 88070 cc-----------t s panTro5.chr17 16354788 14 + 83181570 ccttcccttccctt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259558 3 + 83442489 CC-----------T i panPan2.chr17 C 0 I 322 s gorGor5.CYUI01015385v1 4106682 9 + 4267968 ccttccctt----- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094869 3 - 2193130 tct----------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1877511 3 + 3513951 ------ttt----- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13040 3 - 4077172 ------ttt----- i cebCap1.NW_016107543v1 C 0 C 0 s dasNov3.JH570468 558503 3 - 852752 ------TCT----- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e cerAty1.NW_012006043v1 1999641 100 - 8458610 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=23686.000000 s hg38.chr17_JH159148v1_alt 43759 29 + 88070 cccttcccttcccttcccttcct--------------------tccctt s panTro5.chr17 16354802 49 + 83181570 cccttcccttcccttcccttcctttcccttcccttcccttccctccctt i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106691 29 + 4267968 cccttcccttcccttcccttcct--------------------tccctt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094872 28 - 2193130 -tctttctttctttttccttcct--------------------tccttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1877514 29 + 3513951 tcctttctttgcatttctttctt--------------------tctctc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13043 29 - 4077172 tcctttcttttcctttctttgct--------------------tttctt i cebCap1.NW_016107543v1 C 0 I 38 s dasNov3.JH570468 558506 25 - 852752 Gccttcctt---ccttccttcct--------------------tcctt- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e cerAty1.NW_012006043v1 1999641 100 - 8458610 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16259561 322 + 83442489 I a score=9392.000000 s hg38.chr17_JH159148v1_alt 43788 36 + 88070 c-ccttcctttcccctcccct---ccccacccctcccctc s panTro5.chr17 16354851 36 + 83181570 c-ctttcctttcccctcccct---ccccacccctcccctc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106720 39 + 4267968 c-ccttcctttcccctcccccccacccctcccctcccctc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094900 40 - 2193130 ctctttccttgattcttcctttctttctttctttcttttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1877543 16 + 3513951 -tccttccttccttctt----------------------- i saiBol1.JH378271 C 0 C 0 s dasNov3.JH570468 558531 34 - 852752 --ccttccttccttccttccttccttccttccttcc---- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 13072 38 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e cerAty1.NW_012006043v1 1999641 100 - 8458610 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16259561 322 + 83442489 I a score=1987.000000 s hg38.chr17_JH159148v1_alt 43824 4 + 88070 -ccct s panTro5.chr17 16354887 4 + 83181570 -ccct i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106759 4 + 4267968 -ccct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094940 4 - 2193130 -ttct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999741 4 - 8458610 -ctct i cerAty1.NW_012006043v1 I 100 C 0 s saiBol1.JH378271 1877559 4 + 3513951 -tcct i saiBol1.JH378271 C 0 C 0 s dasNov3.JH570468 558565 4 - 852752 ttcc- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 13072 38 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16259561 322 + 83442489 I a score=69088.000000 s hg38.chr17_JH159148v1_alt 43828 60 + 88070 -TTCTTTCT-TTCTTTC---------CTT-ttccttccttccttcccct---tccttccttccttccttccttca s panTro5.chr17 16354891 61 + 83181570 -ctctttctcttctttc------tttctt-tttctttctttctttcCTT------ttccttccttccttccttca i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106763 57 + 4267968 -cTCTTTCTCTTCTTTC------TCTCTT-TTTCTTTCTTTCCTT----------ttccttccttccttccttca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2094944 60 - 2193130 -ttctttct-ttctttc------tttctt-cttttttctttctttcttt------ccttttccttccttccttca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999745 72 - 8458610 -ttctttct-ttctttctctctctctctc-cttccttccttccttccttccttccttccttccttccttccttcc i cerAty1.NW_012006043v1 C 0 I 4 s saiBol1.JH378271 1877563 59 + 3513951 -tccttcct-tccctcc------ttcttc-ctttcttccttccttcctt---tcttccctccctccctctc---- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13110 59 - 4077172 -tccttcct-tccttcc------ttcctt-ccttcctccctccctccct---ccctccctccctcccttcc---- i cebCap1.NW_016107543v1 I 38 C 0 s dasNov3.JH570468 558569 64 - 852752 ttccttcct-tccttcc------ttccttccttccttccttccttccttccttccttccttccttccttcc---- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I e panPan2.chr17 16259561 322 + 83442489 I a score=39640.000000 s hg38.chr17_JH159148v1_alt 43888 14 + 88070 ttccttccttcctt s panTro5.chr17 16354952 14 + 83181570 ttccttccttcctt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259883 14 + 83442489 ttccttccttcctt i panPan2.chr17 I 322 C 0 s gorGor5.CYUI01015385v1 4106820 14 + 4267968 ttccttccttcctt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2095004 14 - 2193130 ttctttccttcctt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999821 14 - 8458610 ttccttccttcctt i cerAty1.NW_012006043v1 I 4 I 68 s saiBol1.JH378271 1877622 14 + 3513951 tccctccttccttt i saiBol1.JH378271 C 0 I 2 s cebCap1.NW_016107543v1 13169 14 - 4077172 ttcctttcttcctt i cebCap1.NW_016107543v1 C 0 I 2 s dasNov3.JH570468 558633 14 - 852752 ttccttcctttctt i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=59459.000000 s hg38.chr17_JH159148v1_alt 43902 46 + 88070 ------TTCA--CTCTCTTTCCTT-------------CTGTC-------TCTTGCTCTCTTTCTTCCTC-------CGTTC------------ s panTro5.chr17 16354966 46 + 83181570 ------TTCA--CTCTCTTTCCTT-------------CTGTC-------TCTTGCTCTCTTTCTTCCTC-------CGTTC------------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259897 46 + 83442489 ------ttca--ctctctttcctt-------------ctgtc-------tcttgctctctttcttcctc-------cgttc------------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106834 46 + 4267968 ------TTCA--CTCTCTTTCCTT-------------CTGTC-------TCTTGCTCTCTTTCTTCCTC-------CGTTC------------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2095018 48 - 2193130 ------ttcattctctctttcctt-------------ctctc-------tcttgctccctttcttcctc-------tgttt------------ i nomLeu3.chrUn_GL397460_1 C 0 C 0 s saiBol1.JH378271 1877638 39 + 3513951 ------ttct--ttctttcttATT-------------CTCTC-------TC--GCTCTCTTTCTTCCTC------------------------ i saiBol1.JH378271 I 2 C 0 s cebCap1.NW_016107543v1 13185 41 - 4077172 ------ttcc--ctccttcttatt-------------ctctc-------tcttgctctctttcttcctc------------------------ i cebCap1.NW_016107543v1 I 2 C 0 s dasNov3.JH570468 558647 91 - 852752 ttttctttct--ttcTCTTTCcttgcttgtttgcttgctttcttgcttttcttgctttctctctttttctctagctcattccatcccccatcc i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e manLeu1.NW_012106252v1 2184033 505 + 4244037 M e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e chlSab2.chr16 64938249 303 + 75148670 I e cerAty1.NW_012006043v1 1999835 68 - 8458610 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=2727257.000000 s hg38.chr17_JH159148v1_alt 43948 732 + 88070 ----CTTTCTTCCTGTCTGTGTATA--------------------------TTGTCTTCTT-CCCATATCTTTCCTAGTTTTTTCCTCCTCTCTCACCTTCTGTTCCTCCTCTTCCTCCTCC---TCCTTTTTCTCCTAGAGTTCATGGC----TGTCCATTACATTTAAGAAGGAAAG-------------------------ATTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGGGTGCTCATACCAATTTCCATCTGCCTGAATCTGCATCTCTGTGCCTTAGGGCTCTTGTATTGCAACTACAGAAAGTCATGTCACCTGTGCACACTACAGGGAGAAAAATATTCAACTGAAAATTCTAAAgagtggatttatacagactctagcttcttcactgctgaagtttgagaattcaaagttgtgtgtttttcatcatttctgaaaaatttccctttagcttaagcttcagttgatctctgtgat-actggcttaatagtatacccttttctgtatcactgccacaatcccttct-ggcctgttctgccc-ttcctaatacactgtattcattggaatctttttctcagagtatcttctgggaaaaaccaaactatgacaTTaca-----tctctcagcctcaatttcctcatctctacaattagaacactaatgcctactttgaaagttttttcaataattaatgataatgtacataaaagattta-cacaatatccatcaaatgataggcaactgaaaaca s panTro5.chr17 16355012 732 + 83181570 ----CTTTCTTCCTGTCTGTGTATA--------------------------TTGTCTTCTT-CCCATATCTTTCCTAGTTTTTTCCTCCTCTCTCACCTTCTGTTCCTCCTCTTCCTCGTCC---TCGTTTTTCTCCTAGAGTTCATGGC----TGTCCATTACATTTAAGAAGGAAAG-------------------------ATTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGGGTGCTCATACCAATTTCCATCTGCCTGAATCTGCATCTCTGTGCCTTAGGGCTCTTGTATTGCAACTACAGAAAGTCATGTCACCTGTGCACACTACAGGGAGAAAAATATTCAACTGAAAATTCTAAAgagtggatttatacagactctagcttcttcactcctgaagtttgagaattcaaagttgtgtgtttttcatcatttctgaaaaatttccctttagcttaagcttcagttgatctctgtgat-actggcttaatagtatgcccttttctgtatcactgccacaatcccttct-gtcctgttctgccc-ttcctaatacactgtattcattggaatctttttctcagagtatcttctgggaaaaaccaaactatgacaTTaca-----tctctcagcctcaatttcctcatctctacaattagaacactagtgcctactttgaaagttttttcaatgattaatgataatgtacataaaagattta-cacaatatccatcaaatgataggcaactgaaaaca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16259943 732 + 83442489 ----ctTTCTTCCCGTCTGTGTATA--------------------------TTGTCTTCTT-CCCATATCTTTCCTAGTTTTTTCCTCCTCTCTCACCTTCTGTTCCTCCTCTTCCTCGTCC---TCCTTTTTCTCCTAGAGTTCATGGC----TGTCCATTACATTTAAGAAGGAAAG-------------------------ACTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGGGTGCTCATAccaatttccatctgcctgaatctgcatctctgtgccttagggctctTGTATTGCAACTACAGAAAGTCATGTCACCTGTGCACACTACAGGGAGAAAAATATTCAACTGAAAATTCTAAAGAGTGGATTTATACAGACTCTAGCTTCTTCACTCCTGAAGTTTGAGAATTCAAAGTTGTGTGTTTTTCATCATTTCTGAAAAATTTACCTTTAGCTTAAGCTTCAGTTGATCTCTGTGAT-ACTGGCTTAATAGTATGCCCTTTTCTGTATCACTGCCACAATCCCTTCT-GTCCTGTTCTGCCC-TTCCTAATACACTGTATTCATTGGAATCTTTTTCTCAGAGTATCTTCTGGGAAAAACCAAACTATGACATTaca-----tctctcagcctcaatttcctcatctctacaattagaacactaatgcctactttgaaagttttttcaataattaatgataatgtacataaaaaattta-cacaatatccatcaaatgataggcaactgaaaaca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4106880 732 + 4267968 ----CTTACTTCCTGTCTGTGTATA--------------------------TTGTCTTCTT-CCCATATCTTTCCTAGTTTTTtcctcctctctcaccttctgttcctcctcttcctcctcc---tcctttttctcctAGAGTTCATGGC----TGTCCATTACATTTAAGAAGGAAAG-------------------------ATTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGGGTGCTCATACCAATTTGCATCTGCCTGAATCTGCATCTCTGTGCCTTAGGGCCCTTGTATTGCAACTACAGAAAGTCATGTCACCTGTGCACACTACAGGGAGAAAAATATTCAACTGAAAATTCTAAAgagtggatttatacagactctagcttcttcgctcctgaagtttgagaattcaaagttgtgtgtttttcatcatttctgaaaaatttccctttagcttaagtttcatttgatctctgtgat-actggcttaatagtatacccttttctgtatcactgccacagtcccttct-ggcgtgttctgccc-ttcctaatacattgtattcattggaatctttttctcagagtatcttctgggaaaaaccaaactatgacaTTaca-----tctctcagcctcaatttcctcatctctacaattagaacactaatgcctactttgaaagttttttcaataattaatgataatgtacgtaaaagattta-cacaatatccatcaaatgataggcaactgaaaaca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2095066 731 - 2193130 ----ctttcttcctgtctgtgtata--------------------------ttgtcttctt-cccatatctttcctagttttttcctcctctctcaccttctgttcctcctcttcctccctc---tcctctttctCCTAGAGTTCATGGC----TGTCCACTACATTTAAGAAGGAAAG-------------------------ACTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCACACCTGTATATCATGGAACTTAGTGTGCTCGTGCCAATTTCCGTCTGCCTGAATCTGCATCTCTGTGCCTTAGGGCTCTTGTATTGCAACTACAGAAAGTCATGTCACCTGTGCACGCTACAGGGCGAAAAATATTCAAGTGAAAATTCTAAAGAGTGGATTTATACAGACTCTAACTTCTTCACTCCTGAAGTCTGAGAGTTCAAAGTTGCGTGTTTTTCATCATTTCTGAAAAATTTCCCTTTAGCTTAAGCTTCAGTTGATCTCTATGAT-ACTGGCTTAATAGTATACCCTTTTCTGTATCACTTCCACAATCCCTTCT-GGCGTGTTCTGCCC-TTCCTAATACACTGTATTGATTGGAATCTTTTTCACAGAGTATCTTCTGGG-AAAACCAAACTATGacattaca-----tctctcagcctcaatttcctcatctctaaaattagaacactaatgcctactttgaaagttttttcaataattaatggtaatgtacataaaggattta-cacaatatccatcaaatgataggcaactgaaaaca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 1999903 735 - 8458610 ----ctttcttcctctttgtgtata--------------------------ttgtcttctt-cccgtatctttcttagttttttcctcctctgtcaccttctgttcctcctcttcCTCCTCC---TCCAGTTTCTCCTGGAGTTCATGGC----AGTCCACTACATTTAAGAAGGAAAG-------------------------ATTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGTGTGCTCTTACCAATTTCCATCTGCCTGAATCTGCACCTCTGTGCCTTAGGGCTCTTGTATTGCAACTACAAAAAGTCATGTCACCTGTGCATGCTACAGGGAGAAAAATActcaactgaaaatactaaagagtggatttataaagactctagcttcttcactcctgaagtttgagaattcaaagttgtgtgtttttcatcatttctgataaattttcctttagcttaagcttcagttgatctctgtggt-actggcttaatagtata-ccttttCTGTATCACTTCCACAGTCCCTTCT-GGTGTGATCTGCCC-TTCCGAGTACACTATATTCATTGGTATCTTTTTCTCAGAGTATCTTCTGGGAAAAACCAAACTATGACACTTCATTacctctctcagcctcaatttcctcatctctacaattggaacactaatgcctactttgaaagctttttcaatacttaatgataatgtacataaaagattta-cacaatatccgtcaagtgataggccactgaaaac- i cerAty1.NW_012006043v1 I 68 C 0 s chlSab2.chr16 64938552 736 + 75148670 ----ctttcttcctctctgtgtata--------------------------ttgtcttctt-cccgtatctttcttagttttttcctcctctctcaccttctgttcctcctcttcctcctcc---tcctctttctcctGGAGTTCATGGC----TGTCCACTACATTTAAGAAGGAAAG-------------------------ACTGGACTTGAA---TGGAGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGTGTGCTCTTACCAATTTCCATCTGCCTGAATCTGCACCTCTGTGCCTTAGGGCTCTTGTATTACAACTATAAAAAGTCATGTCACCTGTGCATGCTAAAGGGAGAAAAATACTCAACTGAAAATTCTAAAgagtggatttataaagagtctagcttcttcactcctgaagtttgagaattcaaagttgtgtgtttttcatcatttctgataaattttcctttagcttaagcttcagttgatctctgtggt-actggcttaatagtatacccttttctgtatcacttccacagtcccttct-ggtgtgatctgccc-ttcctagtacactatattcattggtatctttttctcagagtatcttctgggaaaaaccaaactatgacattacattacctctctcagcctcaatttcctcatctctacaattggaacactaatgcctactttgaaagttttttcaatacttaatgataatgtacataaaagattta-cacaatatgcatcaaatgataggcaactgaaaac- i chlSab2.chr16 I 303 C 0 s manLeu1.NW_012106252v1 2184553 735 + 4244037 ----CTTTCTTCCTCTCTGTGTATA--------------------------TTGTCTTCTT-CCCGTATCTTTCTTAGTTTTTtcctcctctgtcaccttctgttcctcctcttcctcctcc---tcctctttctcctGGAGTTCATGGC----AGTCCACTACATTTAAGAAGGAAAG-------------------------ATTGGACTTGAA---TGGTGCAAATGTT---------ACTGTAGACAGGTCTTCATTACCATACCTGTATATCATGGAACTTAGTGTGCTCTTACCAATTTCCATCTGCCTGAATCTGCACCTCTGTGCCTTAGGGCTCTTGTATTGCAACTACAAAAAGTCATGTCACCTGTGCATGCTATAGGGAGAAAAATACTCAACTGAAAATACTAAAGAGTGGATTTATAAAGACTTTAGCTTCTTCACTCCTGAAGTTTGAGAATTCAAAGTTGTGTGTTTTTCATCATTTCTGATAAATTTTCCTTTAGCTTAAGCTTCAGTTGATCTCTGTGGT-ACTGGCTTAATAGTATA-ccttttctgtatcacttccacagtcccttct-ggtgtgatctgccc-ttccgagtacactatattcattggtatctttttctcagagtatcttctgggaaaaaccaaactatgacaTTTCATTacctctctcagcctcaatttcctcatctctacaattggaacactaatgcctactttgaaacctttttcaatacttaatgataatgtacataaaagattta-cacaatatccgtcaagtgataggcaactgaaaac- i manLeu1.NW_012106252v1 M 505 C 0 s saiBol1.JH378271 1877677 723 + 3513951 -------------------TGTATT--------------------------TTTTATTGTT-CTCATTTCTTTCTTAGTTtttttctcctctctcaccttctgtttctcctcttcctcctccttttcctctttcttctAAGGTTCATGAT----TGTCCACCAAATTTAAGAAGCAAAG-------------------------ATTGGATTTGAG---TGGAGCAAATGGT-------AGATCATAGACTGGTCTTCATTACCACACCTGTTTATCATGAAACCTagtgtgctcggaccaattttcatctgccagcatctgcttctctgtcccttagggctctTGTATTGCAAATACAGAAAGTTATGTCACCTGTACATGCTAGAGGGAGAAAAATATTCAACTAATGATTCTGGAGAGTGGATTTATGAAGACTCCAGCTTTCTCATTCCTGAAGTAGGACAATTCTGATTTGTGTGTTTTTCATCATTTCTGATAAATTTCCCTTTAGCTTAAGCTTCAGTCGATCTCTGTCAT-GCTGACATCATAGTCTACCCTTTTCTGTATCACTTCCATAATCCCTCCT-GGTGCGATCTGCAC-TTCCTGATACACTACATGCATTGGAACCTTTTTCTCAGAGTATCTTCTGAGAAAAACCAAACTATGACAttacattacttctcttagcctcagtttcctcatgtctatgtttggaacactaatgcctgttttgaaagttt----aagaattaatcataatgtacataaaagattta-gtcaatatccatcagataataggcaactgaaaaca i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13226 726 - 4077172 -------------------tatatt--------------------------ttttattttt-ctcatttctttcttagtttttttctcctctctcaccttctgttcctcctcttcctcctccttttcctctttcttCTAAGGTTCGTGAT----TTTTCACCACATTTACGAAGCAAAG-------------------------ATTGGATTTGAG---TGGAGCAAATGGT-------AGATCATAGACTGGTCTTCATTACCACACCTGTTTATCATGAAACCTAGTGTGCTCGGACCAATTTCCATCTGCCAGAATCTGCATCTCTGTCCCATAGGTCTCTTGTATTGCAAACACAGAAAGTCATGTCACCTGTACATGCTAGAGGGAGAAAAATATTCAACTAATGATTCTGGAGAGTGGATTTATGAAGACTCCAGCTTTCTCATTCCTGAAGTAGGACAATTCTAATTTCTGCGTTTTTCATCATTTCTGATAAAATTCCCTTTAGCTTAAGCTTCAGTTGATCTCTGTCAT-ACTGGCTTCATAGCCTACTCTTTTCTGTATCACTTCCATAATCCCTCCT-GGTGTGATCTGCAC-TTCCTGATACGCTACCTGCATTGGAA-CTTTTTCTCAGAGTATCTTCTGAGAAAAACCAAACTATGACAttacattacttctcttggcctcagtttcctcatgtctatgtttggaacactaatgcctattttgaaagtttgttcaagaattaatgataacgtacttaaaagattta-gtcaatatccatcaaataataggcaactgaaaaca i cebCap1.NW_016107543v1 C 0 C 0 s dasNov3.JH570468 558738 800 - 852752 ctcccttctttccttcttctttccggtcaaatcttttaactcccagtcaccttctctccttccccatttccgtctatttcttcaactcctc-ctctccttcttgtcctctttatcttcctct---acttcttgcttcttATTTTTAAAAAATTGTATACACGACTTTGAATAGGAAAAACAGTTTTTAGTAAGCCTAACGTGGTATGTGATTCAAACTGTGAAGGAAAAGTTGTATTCTACATTATATTCTGATCAGCA-----ACCCATGTATTTTAT----CTTGTTGTATTTGAATTATCTTCCATCTTCCAATATCTGCACCTCTCTTCCTAACAGCTCTTTTTAAGCAAGTATAGAAAGTCATGTGTCCTGTGCTTACCTTGACCAGAAAAACTGTAAACCCAAAATTTTGgggagttggctt-taagaaccccagcctcctaatttctcaagaagaatagtttcaaactttgtgttttacatta--tcttaaagcttccattcaagtttaagcctcagttgcccactgtgatggccagcttcatagtgtaattttccctgtgccactttcccaattacttatcagtgtaatctccactttcctaATGAATTACTTTGACTGGAATCTTCCTCTCGACATTGTACATGGGAGAAACTATACCATGACAttactttaactctcttagctttgatttcctcgtctctaaaagggagatattaatatctaccatgccagcttcTTCAAGAATTTGAGATTATCTATACAGAACATCTAGTCCAATATCTAGTGAGAAATGGAAAACCCAGAACA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=576487.000000 s hg38.chr17_JH159148v1_alt 44680 170 + 88070 tattatttcttttCTCTCCAG-AAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTATAATAATTAACTAGATCAAC----tttttttcttttactttaagttccaggacacatgtgcagaatgtgcaggtttgttgagtaggtatacatgtgccatgattgtttg s panTro5.chr17 16355744 171 + 83181570 tattatttcttttCTCTCCAG-AAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTATAATAATTAACTAGATCAAC---ttttttttcttttactttaagttccaggacacatgtgcagaatgtgcaggtttgttgagtaggtatacacgtgccatgattgtttg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16260675 170 + 83442489 tattgtttcttTTCTCTCCAG-AAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTATAATAATTAACTAGATCAAC----tttttttcttttactttaagttccaggacacatgtgcagaatgtgcaggtttgttgagtaggtatacacgtgccatgattgtttg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4107612 171 + 4267968 tattatttcttttCTCTCCAG-AAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTATAATAATTAACCAGATCAAC---ttttttttcttttactttaagttccaggacacatgggcagaatgtgcaggtttgttgagtaggtatacatgtgccatgattgtttg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2095797 170 - 2193130 tattatttcttttCTCTCCAGAAAATTCCTAAACTAATTTTAATGTTGATGATAAGAGTATATTTATAATAATTAATTAGATCAAA-----ttttttcttttaatttaagttccaggacacatgtgcagaatgtgcaggtttgttgagtaggtatacatgtgccatgattgtttg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2000638 172 - 8458610 -attagttcttttCTCTCCAGAAAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTCTAATAATTAACTAGATCTACt--ttttttttcttttactttaagttcctggacacatgtgcagaatgtgcaggcttgttgaataggtatacatgtgccatgattgtttg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64939288 171 + 75148670 -attagttcttTTCTCTCCAGAAAATCCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTCTAATAATTAACTAGATCTAC---ttttttttcttttactttaagttcctggacacatgtgcagaatgtgcaggcttgttgaataggtatacatgtgccatgattgtttg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2185288 172 + 4244037 -attagttcttttCTCTCCAGAAAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATATTTCTAATAATTAACTAGATCTACt--ttttttttcttttactttaagttcctggacacatgtgcagaatgtgcaggcttgttgaataggtatacatgtgccatgattgtttg i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1878400 170 + 3513951 tattagttcttttCTATCTAGAAAATTCCTAAACTAATTTTAATATTGATGATAAGAATATGTTTATAACAAATAACTAGGTCAACTAACtttttttct-----tttaacttctgggatgcatatggagaatgtgcgtgcttgttacataggtatacaaatgccatggttgtttg i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 13952 170 - 4077172 tattagttcttttCTGTCCAGAAAATTCCTAAACCAATTTTAACGTTGATGATAAGAATATGTTTATAATAAATAACTAGGTCAACTAACTTTttttct-----tttaacttctgggatgcatatggagaatgtgcatgtttgttacatatgtatacaagtgccacagttgtttg i cebCap1.NW_016107543v1 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e macNem1.NW_012014910v1 2116948 7525 + 10377808 T e macFas5.chr16 28052907 0 - 80997621 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1405449.000000 s hg38.chr17_JH159148v1_alt 44850 264 + 88070 ctgcacctatcaacctgtcctctaggtcttaagccctgcatgcattaggtatttgtcctaatgctctccctccccttgcccccgacccccccaacaggccctggtgtgtgatgttcccctccctgtgtctgtgtgttctggttgatcaactcccacttatgagtgagatcatgtggtgtttggttttctgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtccctgcaaaggatatgaactcattgt s panTro5.chr17 16355915 264 + 83181570 ctgcacctatcaacctgtcctctaggtcttaagccctgcatgcagtaagtatttgtcctaatgctctccctccccttgcccccgacccccccaacaggccctggtgtgtgatgttcccctccctgtgtctgtgtgttctggttgatcaactcccacttatgagtgagaccatgcggtgtttggttttctgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtccctgcaaaggatatgaactcattgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16260845 264 + 83442489 ctacacctatcaacctgttctctaggtcttaagccctgcatgcattaagtatttgtcctaatgctctccctccccttgcccccgacccccccaacaggccctggtgtgtgatgttcccctccctgtgtctgtgtgttctggttgatcaactcccacttatgagtgagatcatgcggtgtttggttttctgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtccctgcaaaggatatgaactcattgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4107783 264 + 4267968 ctgcacctatcaacctgtcctctaggtcttaagccctgcatgcattaggtatttgtcctaatgctctccctcccctttcccccgacccccacaacaggccctggtgtgtgatgttcccctccctgtgtctgtgtgttctggttgatcaactcccacttatgagtgagatcatgcggtgtttggttttctgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtccctgcaaaggatatgaactcattgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2095967 251 - 2193130 ctgcacctatcaacctgtcctctaggtcttaagccctgcatgcattaggtgtttgtcctaatgctctccctccccttgcccccgaccccctcaacaggccctgatgtgtgatgttcccctccctgtgtccgtgtgttctcgttgatcaactcccacttatga-------------gtgtttggttttctgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtccctgcaaaggacatgaactcattct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28052907 260 - 80997621 ctgcacctatcaacctgtcctctaggtcttaaaccctacatgcattaggtatttgtcctaatgctctcactccccttgcctccggcccccccgacaggccctggtgtgtgatgttcccctccctgtgtccatgtgttctcgttgatcagctcccacttatgagtgagatcatgcggtgtttggttttccgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtctctgcaaaggacatgaactca---- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2109423 260 + 10377808 ctgcacctatcaacctgtcctctaggtcttaaaccctacatgcattaggtatttgtcctaatgctctcactccccttgcctccggcccccccgacaggccctggtgtgtgatgttcccctccctgtgtccatgtgttctcgttgatcagctcccacttatgagtgagatcatgcggtgtttggttttccgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtctctgcaaaggacatgaactca---- i macNem1.NW_012014910v1 T 7525 C 0 s cerAty1.NW_012006043v1 2000810 260 - 8458610 ctgcacctatcaacctgtcctctaggtcttaaaccctacatgcattaggtatttgtcctaatgctctcactccccttgcctccggcccccccgataggccctggtgtgtgatgttcccctccctgtgtccatgtgttctcattgatcaactcccacttacgagtgagatcatgcggtgtttggttttccgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtctctgcaaaggacatgaactca---- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64939459 260 + 75148670 ctgcacctatcaacctgtcctctgggtcttaaaccctacatgcattaggtatttgtcctaatgctctcactccccttgcctccagcacccccgacaggccctggtgtgtgatgttcccctccctgtgtccgtgtgttctcgttgatcagctcccacttatgagtgagatcatgcggtgtttagttttctgctcctgtgttactttgctgagaatgatggcttccggcttcttccatgtccctgcaaaggacatgaactca---- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2185460 260 + 4244037 ctgcacctatcaacctgtcctctaggtcttaaaccctacatgcattaggtatttgtcctaatgctctcactccccttgcctccggcccccccgataggccctggtgtgtgatgttcccctccctgtgtccgtgtgttctcgttgatcaactcccacttatgagtgagatcatgtggtgtttggttttccgctcctgtgttactttgctgagaatgatggcttccagcttcttccatgtctctgcaaaggacatgaactca---- i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1878570 261 + 3513951 ctgcacctatcaacccatcatctaggtcttaagccc--agcatgttagatatttgtcctaatgctctccctccttttgccccctaccctct-gacaggccctggtgtgtgatgctcccttccttgtgtgcatgtgttctcattgatcaacttccacttatgagggagaacatgtggtgtttggtttactgttcttgtgttagtttgctgagaatgatggcttccagcttcatccatgtccctgcaaaggacacgatctcttttt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 14122 263 - 4077172 ctgcacctatcaacccgtcatctaggtcttaagccctgaatgtgttagatatttgtcctaatgctctccctccttttgccccctaccctct-gacaggccctggtgtgtgatgctcccttccttgtgtccatgtgttctcattggtcaactcccacttatgagtgagaacatgcggtgtttggttttctgttcttgtgttagtttcctgagaatgatggcttccagcttcatccatgtccctgcaaaggacatgatctcttttt i cebCap1.NW_016107543v1 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2206989 10 + 4569836 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=2751343.000000 s hg38.chr17_JH159148v1_alt 45114 425 + 88070 tttt-----tatggctgcataggattccatggtttatatgtgccacattttctttatccagtctatcactgatgggcatttgggttggttccaagtctttgctattgtaaatactgctgcaataaacatatatgtgcatgtgtttttatagtagaatcatttatattcctttgagtatatacccggtaataggattgctgagtcaaatgg-tttttc-tggttctagatccttgaggaattgccacactgtcttacacagtggttgaactaattcactatcccaccaacagtgt-aaaagcattcctatttctccacagcctctccagcatctattgtttcctgactttttaataatcaccattatgactggcatgagatggtatctcaatgtggttttgatttgcatttctctaatgatcaatgatgatgag s panTro5.chr17 16356179 426 + 83181570 tttt-----tatggctgcataggattccatggtgtatatgtgccacattttctttatccagtctatcactgatgggcatttgggttggttccaagtctttgctattgtaaatactgctgcaataaacatatatgtgcatgtgtttttatagtagaatcatttatattcctttgagtatatacccggtaataggattgctgagtcaaatggttttttc-tggttctagatccttgaggaattgccacactgtcttacacagtggttgaactaattcactatcccaccaacagtgt-aaaagcgttcctatttctccacagcctcgccagcatctattgtttcctgactttttaataatcaccattatgactggcatgagatggtatctcaatgtggttttgatttgcatttctctaatgatcaatgatgatgag i panTro5.chr17 C 0 C 0 s panPan2.chr17 16261109 422 + 83442489 tttt-----tatggctgcataggattccatggtgtatatgtgccacattttctttatccagtctatcactgatgggcatttgggttggttccaagtctttgctattgtaaatactgctgcaataaacatatatgtgcatgtgtttttatagtagaatcatttatattcctttgagtatata---ggtaataggattgctgagtcaaatgg-tttttc-tggttctagatccttgaggaattgccacactgtcttacacagtggttgaactaattcactatcccaccaacagtgt-aaaagcgttcctatttctccacagcctcgccagcatctattgtttcctgactttttaataatcaccattatgactggcatgagatggtatctcaatgtggttttgatttgcatttctctaatgatcaatgatgatgag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4108047 425 + 4267968 tttt-----tatggctgcataggattccatggtgtatatgtgccacattttctttatccagtctatcactgatgggcatttgggttggttccaagtctttgttattgtaaatactgctgcaataaacatatatgtgcatgtgtttttatagtaggatcatttatattcttttgagtatatacccggtaataggattgctgagtcaaatgg-tttttc-tggttccagatccttgaggaattgccacactgtcttacacagtggttgaactaattcactatcccaccaacagtgt-aaaagcgttcctatttctccacagcctcgccagcatctattgtttcctgactttttaataatcaccattatgactggcatgagatggtatctcaatgtggttttgatttgcatttctctaatgatcagtgatgatgag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2096218 425 - 2193130 tttt-----tatggctgcataagatttcatggtgtatatgtgccacgttttctttatccagtctatcattgatgggcatttgggttggttccaagtctttgctattgtaaatactgcagcaataaacatatatgtgcatgtgtttttatagtagaatcatttatattcctttgagtatatacccagtaataggattgctgagtcaaatgg-tttttc-cggttctagatccttgaggaattgccacactgtcttacacagtggttgaactaatttacaatctcaccaacagtgt-aaaagcattcctacttctccacagcctcgccagcatctattgtttcctgactttttaataattaccattatgactggcatgacatggtagctcattgtggtttcgatttgcatttctctaatgatcaatgatgatgag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28053167 426 - 80997621 tttt-----tatggctgcataggattctatggtgtatatgtgccacattttctttatccagtctgtcatcgatgggcatttgagttggttccaagtctttgctaatgtaaatactgctgcagtaaacatatatgtgcatgtgcttttatagtagaatcatttacattcctttgagtatgtacccagtaatgggattgctgagtcaaatgg-tatttc-tggttgtagatccttgtggaattgccacactgtcttacacagtggttgaactaatttacaatcccaccaacagtgtaaaaagcgttcctatttctccacagcctcgtcagcatctattgtttcctgactttttaataatcgccattctgactggcgtgagatggtatctcattgaggttttgatgtgcatttctctaatgatcaatgatgatgaa i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2109683 427 + 10377808 tttt-----tatggctgcataggattctatggtgtatatgtgccacattttctttatccagtctgtcatcgatgggcatttgagttggttccaagtctttgctaatgtaaatactgctgcagtaaacatatatgtgcatgtgcttttatagtagaatcatttacattcctttgagtatgtacccagtaatgggattgctgagtcaaatgg-tatttcttggttgtagatccttgtggaattgccacactgtcttacacagtggttgaactaatttacaatcccaccaacagtgtaaaaagcgttcctatttctccacagcctcttcagcatctattgtttcctgactttttaataatcgccattctgactggcgtgagatggtatctcattgaggttttgatgtgcatttctctaatgatcaatgatgatgaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2001070 426 - 8458610 tttt-----tatggctgcataggattctatggtgtatatgtgccacattttctttatccagtctgtcatcgatgggcatttgagttggttccaagtctttgctaatgtaaatactgctgcagtaaacatatatgtgcatgtgcttttatagtagaatcatttacattcctttgagtatgtacccagtaatgggattgctgagtcaaatgg-tatttc-tggttgtagatccttgtggaattgccacactgtcttacacagtggttgaactaatttacaatcccaccaacagtgtaaaaagcgttcctatttctccacagcctcatcagcatctattgtttcctgactttttaataatcgccattctgactggcgtgagatggtatctcattgaggttttgatgtgcatttctctaatgatcaatgatgatgaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64939719 426 + 75148670 tttt-----tatggctgcataggattctatggtgtatatctgccacattttctttatccagtctatcatcaatgggcatttgggttggttccaagtctttgctaatgtaaatactgctgcagtaaacatatatgtgcatgtgcttttatagtagaatcatttacattcctttgagtatatacccagtaatgggattgcagagtcaaatgg-tatttc-tggttgtagatccttgtggaattgccacactgtcttacacagtggttgaactaatttacaatcccaccaacagtgtaaaaagcgtttctatttctccacagcctcaccggcatctattgtttcctgactttttaataatcgccattctgactggcgtgagatggtatctcactgaggttttgatgtgcatttctctaatgatcaatgatgatgag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2185720 426 + 4244037 tttt-----tatggctgcataggattctatggtgtatatgtgccacattttctttatccagtctgtcatcgatgggcatttgagttggttccaagtctttgctaatgtaaatactgctgcagtaaacatatatgtgcatgtgcttttatagtagaatcatttacattcctttgagtatgtacccagtaatgggattgctgagtcaaatgg-tatttc-tggttgtagatccttgtggaattgccacactgtcttacacagtggttgaactaatttacaatcccaccaacagtgtaaaaagcgttcctatttctccacagcctcgccagcatctattgtttcctgactttttaataatcaccattctgactggcgtgagatggtatctcattgaggttttgatgtgcatttctctaatgatcaatgatgatgaa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2206999 426 + 4569836 tttt-----tatggctgcataggattctatggtgtatatgtgctacattttctttatccagtctgtcatcgatgggcatttgggttggttccaagtctttgctaatgtaaatactgctgcagtaaacatatatgtgcatgtgcttttatagtagaatcatttacattcctttgagtatatacccagtaatgggattgctgagtcaaatga-tatttc-tggttgtagatccttgaggaattgccacactgtcttacactgtggttgaactaatttacaatcccaccaacagtgtaaaaagcattcctatttctccacagcctcgtcagcatctattgtttcctgactttttaataattgccattctgactggcatgagatggtatctcattgaggttttgatttgcatttctctaatgaacaatgattatgag i colAng1.NW_012122154v1 I 10 C 0 s saiBol1.JH378271 1878831 428 + 3513951 --ttgtgtgtgtggctgcataacgttccatggtgtatatgtgccacattttctttatccagtctatcattgatgagtacctgggatggttccaagtctttgctattgtaaatagtgctacaataaacatatatgtgcatatgtttttatagtagtatcatttatattcctttggggatctacctagtagtggcattgctgagtcaaatgg-tatttc-tggttttagatccttgaggaatttccacactgtcttccacagtggttgaacgaatttacaattccaccaacagcat-aaaagcatttctatttctccacagcctcaccagcatctgttgtttcctgactttttaataatcaccattctgactggcatgagatggtatctcattgtggttttagcttacatttctctaatgatcagtgatgatgag i saiBol1.JH378271 C 0 T 12903 s cebCap1.NW_016107543v1 14385 423 - 4077172 --tt-----tgtggctgcataacattccatggtgtatatgtgccacattttctttatccagtctatcattgatgagcatttgggctggttccaagtctttgctattgcaaatagtgctgcaataaacatatatgtgcatgtgtttttataacagaatcgttcatattcctttgggtatctacctagtagtggcattgctgagtcaaatgg-tatttc-tggttttagatccttgaggaatttccacactgtcgtccacagtggttgaactaatttacaattccaccaacagcgt-aaaagcatttctatttctccatagcctcatcagcatctattgtttccttactttttaatgatcaccattctgactggcgtgagatggtatctcattgtggttttagcttacatttctctaatgatcagtgataatgag i cebCap1.NW_016107543v1 C 0 I 5976 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=923831.000000 s hg38.chr17_JH159148v1_alt 45539 201 + 88070 ctttttttcat--atgtttgttggccacataaaagtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatgaggttgtttgtttttcttgtaaacttgtttaagttccttgtagattctggattttagacctttgtcagatgggtagattgcaaaaattctcacccattctgtaggttgtgtgttctctct s panTro5.chr17 16356605 201 + 83181570 ctttttttcat--atgtttgttgcccacataaaagtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatgaggttgtttgtttttcttgtaaacttgtttaagttccttgtagattctggattttagacctttgtcagatgggtagattgcaaaaattctctcccattctgtaggttgtgtgttctctct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16261531 201 + 83442489 ctttgtttcat--atgtttgttggccacataaaagtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatgaggatgtttgtttttcttgtaaacttgtttaagttccttgtagattctggattttagacctttgtcagatgggtagattgcaaaaattctctcccattctgtaggttgtgtgttctctct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4108472 201 + 4267968 ctttttttcat--atgtttgttggccacataaaagtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatgaggttgtttgtttttcttgtaaacttgtttaagttccttgtagattctggattttagacctttgtcagatgggtagattgcaaaaattctctcccattctgtaggttgtgtgttctctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2096643 201 - 2193130 ctttttttcat--atgttcgttggccacataaaagtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttgtttttcttgtaaacttgtttaagatccttgtagattccggatattagacctgtgtcagatgggtagattgcaaaaattctctcccattctgtaggttgtgtgttctctct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28053593 201 - 80997621 ctttttttttc--atgtttgttggccacataaaaatcttctttcgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttgtttttcttgtaaacttgtttaagttccttgtagattctggatattagacctttgtcagatgggtagattgcaaaagttctctcccattctgtaggctgtatgctcttttt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2110110 201 + 10377808 ctttttttttc--atgtttgttggccacataaaaatcttctttcgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttgtttttcttgtaaacttgtttaagttccttgtagattctggatattagacctttgtcagatgggtagattgcaaaagttctctcccattctgtaggctgtatgctcttttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2001496 194 - 8458610 ctttttttttc--atgtttgttggccacataaaaatcttcttttgagaagtatctgttcatatcctttgcccactttttgatggggttgtttatttttcttgtaaa-------aagttccttgtagattctggatattagacctttgtcagatgggtagattgcaaaagttctctcccattctgtaggctgtatgctcttttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64940145 199 + 75148670 gtttttttttcatatgtttgttggccacataaaaatcttcttttgagaagtgtctgttcatatcctttgtccactttttgatgggg----ttgtttttcttgtaaacttgtttaagttccttgtagattctggatattagacctttgtcagatgagtagattgcaaaagttctctcccattctgtgggctgtgtactcttttt i chlSab2.chr16 C 0 I 318 s manLeu1.NW_012106252v1 2186146 201 + 4244037 ctttttttttc--atgtttgttggccacataaaaatcttcttttgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttgtttttcttgtaaacttgtttaagttccttgtagattctggatattagacctttgtcagatgggtagattgcaaaagttctctcccattctgtaggctgtatgctcttttt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2207425 198 + 4569836 -ttattttttc--ata--tgttggccacataaaaatcttcttttgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttgtttttcttgtaaacttgtttacgttccttgtagattctggatattagacctttgtcagatgggtagattgcaaaagttctctcccattctgtaggctgtgtgcccttttt i colAng1.NW_012122154v1 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 14808 5976 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1879259 12903 + 3513951 T e rheMac8.chr16 30139106 31425 - 77216781 I a score=275478.000000 s hg38.chr17_JH159148v1_alt 45740 56 + 88070 gatgatagtttattttgctgtgcaggagctatttagtttaattagatcccatttgt s panTro5.chr17 16356806 56 + 83181570 gatgatagtttattttgctgtgcaggagctatttagtttaattagatcccatttgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16261732 56 + 83442489 gatgatagtttattttgctgtgcaggagctatttagtttaattagatcccatttgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4108673 56 + 4267968 gatgatagtttattttgctgtgcaggagctatttagtttaattagatcccatttgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2096844 56 - 2193130 gatgacagtttattttgctgtgcagaagctatttagtttaattagatcttatttgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28053794 56 - 80997621 gatgatagtttcttttgctgtgcagaagctatttagtttaattagatcccatttgt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2110311 56 + 10377808 gatgatagtttcttttgctgtgcagaagctatttagtttaattagatcccatttgt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2001690 56 - 8458610 gatgatagtttcttttgctgtgcagaagctatttagtttaattagatcccatttgt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64940662 56 + 75148670 gatgatagtttcttttgctgtgcagaagctatttagtttaattagatcccatttgt i chlSab2.chr16 I 318 C 0 s manLeu1.NW_012106252v1 2186347 56 + 4244037 gatgatagtttcttttgctgtgcagaagctatttagtttaattagatcccatttgt i manLeu1.NW_012106252v1 C 0 I 184 s colAng1.NW_012122154v1 2207623 56 + 4569836 gatgatagtttcttttgctgtgcagaagctatttagtttaattagatcccatttgt i colAng1.NW_012122154v1 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 14808 5976 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1879259 12903 + 3513951 T e rheMac8.chr16 30139106 31425 - 77216781 I a score=6421245.000000 s hg38.chr17_JH159148v1_alt 45796 1375 + 88070 caattttggcttttgttgtgatagtttttggcatttttgtcatgaagtctttgcccatgtctatgtcctgaaagttattgcctaggttttcttctagggtttttatgattttgggtttcacatttaagtctttaatccatcttgagttaacttttgtataaggtgtaatgaaggggtccactttcagttttctgcatgtggctagccagttttcccagccccatttattaaatagggaatcttttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctgttttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttcttttgtttgggattgttttggtgatacgggctcttttttggttccatatgaaatttaaagtag-----tttttttttaaattttgtgaagaaagtcaagggtagcttgatgggaatagcatttaatctataaattacttcgggcagcatggccgttttcatgatattgattctttctatccatgatcatgtaatgattttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtagtttcccttgaagaggtccttcacatcccttgtaagttgtattcctaggtattttattctctttgttgcaattgtgaatgggagttcactcatgatttggctctctgcttgtctattatcggtgtataagaatgcttgtgatttttgt-cattgattttgtatcttgagactttgttaaagttgcttatcagcttaaggagtttttaggatgagacactgaggttttctaaatatagaatcacgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgcc-tttatttctttcttttgcctgattgtcctggccagaacttccaatactatgttgaataggagtggtgagagagggcgttcttgtcttgtgccattttcaaagggaatgcttccagcttttgccc------attcagtataatattggctatgggtttgtcaaaaatagctcttattattttgagatatgttccatcaatacctagtttattgagagtttttaagatgaaggatgttgaattttatcgaaggccttttctgcatctattgagataatcatgtggtttttatcattggttctgtttatgtgatggattatgtttattgatttgcatatgttgaaccagccttgcatcccagggatgaag-caatttgatcatggtggataagctttttgatgtgctgctagatttgg s panTro5.chr17 16356862 1377 + 83181570 caattttggcttttgttgtgatagtttttggcatttttgtcatgaagtctttgcccatgtctatgtcctgaaagttattgcctaggttttcttctagggtttttgtgattttgggtttcacatttaagtctttaatccatcttgagttaacttttgtataaggtgtaatgaaggggtccactttcagttttctgcatatggctagccagttttcccagccccgtttattaaatagggaatcttttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctgttttgataccactaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttcttttgtttgggattgtcttggtgatacgggctcttttttggttccatatgaaatttaaagtag----tttttttttttaattttgtgaaggaagtcaagggtggcttgatgggaatagcatttaatctataaattacttcgggcagcatggccattttcatgatattgattctttctatccatgatcatgtaatgattttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtagtttcccttgaagaggtccttcacatcccttgtaagttgtattcctaggtattttattctctttgttgcaattgtgaatgggagttcactcatgatttggctctctgcttgtctattatcggtgtataagaatgcttgtgatttttgcacattgattttgtatcttgagactttgttaaagttgcttatcagcttaaggagtttttaggatgagatgctgaggttttctaaatatagaatcacgtcatctgcaaacaaagacaatttgactccctctcttcctatctgaatgcc-tttatttctttctcttgcatgattgtcctggccagaacttccaatactatgttgaataggagtggtgagagagggcgttcttgtcttgtgccattttcaaagggaatgcttccagcttttgccc------attcagtataatattggctatgggtttgtcaaaaatagctcttcttattttgagatatgttccatcaatacctagtttattgagagtttttaacatgaaggatgttgaattttatcgaaggccttttctgcatctattgagatgatcatgtggtttttatcattggttctgtttatgtgatggattatgtttattgatttgcatatgttgaaccagccttgcatcccagggatgaag-caatttgatcatggtggataagctttttgatgtgctgctagatttgg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16261788 1375 + 83442489 caattttggcttttgttgtgatagtttttggcatttttgtcatgaagtctttgcccacgtctatgtcctgaaagttattgcctaggttttcatctagggtttttgtgattttgggtttcacatttaagtctttaatccatcttgagttaacttttgtataaggtgtaatgaaggggtccactttcagttttctgcatatggctagccagtttttccagccctgtttattaaatagggaatcttttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctgttttgataccactaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttcttttgtttgggattgtcttggtgatacgggctcttttttggttccatatgaaatttaaagta------ttttttttttaattttgtgaaggaagtcaagggtagcttgatgggaatagcatttaatctataaattacttcgggcagcatggccattttcatgatattgattctttctatccatgatcatgtaatgattttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtagtttcccttgaagaggtccttcacatcccttgtaagttgtattcctaggtattttattctctttgttgcaattgtgaatgggagttcactcatgatttggctctctgcttgtctattatcggtgtataagaatgcttgtgatttttgcacattgattttgtatcttgagactttgttaaagttgcttatcagcttaaggagtttttaggatgagatgctgaggttttctaaatatagaatcacgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgcc-tttatttctttctcttgcatgattgtcctggccagaacttccaatactatgttgaataggagtggtgagagagggcgttcttgtcttgtgccattttcaaagggaatgcttccggcttttgccc------attcagtataatattggctatgggtttgtcaaaaatagctcttattattttgagatatgttccatcaatacctagtttattgagagtttttaacatgaaggatgttgaattttatcgaaggccttttctgcatctattgagatgatcatgtggtttttatcattggttctgtttatgtgatggattatgtttattgatttgcatatgttgaaccagccttgcatcccagggatgaag-caatttgatcatggtggataagctttttgatgtgctgctagatttgg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4108729 1385 + 4267968 caattttggcttttgttgtgatagtttttggcatttttgtcatgaagtctttgcccatgtctatgtcctgaaagttattgcctaggttttcttctaggctttttatgattttgggtttcacatttaagtctttaatccatcttgagttaacttttgtataaggtgtaatgaaggagtccactttcagttttctgcatatggctaaccagttttcccagccccgtttattaaatagggaatcttttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctgttttgataccagtaccatgctgttgtggttacagttgctttgtagtatagtttgaagtcaggtggcatgatgcctccagctttgttcttttgtttaggattgtcttggtgatacgggcgcttttttggttccatatgaaatttaaagtagtttttttttttttttaattttgtgaagaaagtcaagggtagcttgatgggaatagcatttaatctataaattacttcgggcagtatggccattttcatgatattgattctttctatccatgatcatgtaatgattttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtagattcccttgaagaggtccttcacatcccttgtaagttgtattcctaggtattttattctc--tgttgcaattgtgaatgggagttcactcatgatttggctctctgcttgtctattatcggtgtataagaatgcttgtgatttttgcacattgattttgtatcttgagactttgttaaagttgcttatcagcttaaggaatttttaggatgagacgctgaggttttctaaatatagaatcacgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgcc-tttatttctttctcttgcctgattgtcctggccagaacttccaatactatgttgaataggagtggtgagagagggtgttcttgtcttgtgccattttcaaagggaatgcttccagcttttgcccattcagattcagtataatattggctatgggtttgtcaaaaatagctcttattattttgagatatgttccatcaatatctagcttattgagagtttttaacatgaaggatgttgaattttatcgaaggccttttctgcatctatcgagataatcatgtggtttttatcattggttctgtttatgtgatggattatgtttattgatttgcatatgttgaaccagccttgcatcccagggatgaag-caatttgatcatggtggataagctttttgatgtgctgctagatttgg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2096900 1370 - 2193130 caatttgggcttttgttgtgatggtttttggcatttttatcatgaaatctttgcccatgtctatgtcctgaatgttattgcctaggttttcttctagggtttttatgattttgggtttcacatttaagtctttaatccatcttgagttaacttttgtataaggtgtaatgaaggggtccagtttcagttttctgcatatggctagccagttttcccaaccctgtttattaaatagggaatcttttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttttattccattggtctacatatctgttttgataccagtaccatgctattgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctccagctttgttcttttgtttaggattgtcttggtgatatggg--cttttttggttccatatgaaatttaaagtag-----tttttttttaaattttgtgaagaaagtcaaggatagcttgatgggaatagcattgaatctataaattacttcaggcagtatggccattttcatgatatagattctttctatccatgatcatgt-----ttttcaatttgtttgtgtcccctcttatttccttgagca-tggtttgtagtttcccttgaagaagtccttcaagtcctttttaagttgtattcctaggtattttattctctttgttgcaattgtgaatgggagttcactcatgatttggctctctgcttgtctattattgatgtataggaatgcttgtgatttttgcacattgattttgtatcttgagactttgttaaagttgcttttcagcttaaggagtttttaggatgagaggctgaggttttctaaatatagaatcacatcatctgcaaacaaagacaattttacttcctcccttcttatctgaatgccttttatttctttctcttgcctgattgccctggccagaacttccaatactatgttgaataggagtggtgagacagggcattcttgtcttgtgccattttcaaagggaatgcttccagcttttgccc------attcagtataatattggctatgggtttgtcaaaaatagctcttattattttgagaaatgtcccatcaatatctagtttattgagagtttttaacaagaaggatgttgaattttatcgaaggccttttctgcatctactgagataatcacgtggtttttatcattagttctgtttatgtgatggattacgtttattgatttgcatatgttgaaccagccttgcatcccaggaatgaagccaatttgatcatggtggataagctttttgatgtgctgctagatttgg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28053850 1376 - 80997621 caattttggcttttgttgccattgtttttggcatttttgtcatgaagtctttgtccatgcctgtgtcctgaatggtattgcctagtttttcttctagggtttttgtgatttggggttttacatttaagtctttaatccatcttgagttaa-ttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagccccatttgttaaatagggaatcctttccccatttcttgtttttgtcatatttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatataactattttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctcccgctttgttcttttgtttaggattgtcttggtgatatgggctcttttttggttccatatgaaatttaaagtag-----ttttaaaaaaaattttgcaaagacagtcaaggatagtttgatgggaatagcattgaatgtagaaattactttgggcagtatggccattttcatgatattgattcttcctatccatgagcatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtggtttcccttgaagaggtccttcatgtcccttgtaagttgtattcctaggtgttttattctctttgttgcaattgtgaatgggagttcactcatga-caagctctctgcttgtctattgttggtgtataggaatacttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagtttttaggctgagatgctgatgttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgctctttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccttgtcttgtcccattttcagagggaatgcttaaagcttttgccc------attcagtataatattggctatgggtttgttataaatagttcttattattttgagatatgttccatcaatacctggtttattgagagtttttaacatgaaggatgttgaattttaatgaaggccttttctgtatctattgagataatcatgtggtttttatcattggttgtgtttatgtgatagattatgtttgttgatttgcatatgttgaaccagccttacatcccagggatgaagccaatttgatcatggcggataagctttttgatgtactgctagatatgg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2110367 1376 + 10377808 caattttggcttttgttgccattgtttttggcatttttgtcatgaagtctttgtccatgcctgtgtcctgaatggtattgcctagtttttcttctagggtttttgtgattttgggttttacatttaagtctttaatccatcttgagttaa-ttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagccccatttgttaaatagggaatcctttccccatttcttgtttttgtcagatttgtcaaagatcagatggttgttgatgcgtggtgttatttctgaggtctcagttctgttccattggtctatatatctattttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctcccgctttgttcttttgtttaggattgtcttggtgatatgggctcttttttggttccatatgaaatttaaagtag-----ttttaaaaaaaattttgcaaagacagtcaaggatagtttgatgggaatagcactgaatctataaattactttgggcagtatggccattttcatgatattgattctttctatccatgagcatgtgaggtttttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtggtttcccttgaagaggtccttcatgtcccttgtaagttttattcctaggtgttttattctctttgttgcaattgtgaatgggagttcactcatga-caagctctctgcttgtctattgttggtgtataggaatacttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagtttttaggctgagatgctgatgttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatttgaatgctctttgtttttttctcttgcctgattgccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccttgtcttgtgccattttcagagggaatgcttaaagcttttgccc------attcagtataatattggctatgggtttgttataaatagttcttattattttgagatatgttccatcaatacctggtttattgagagtttttaacatgaaggatgttgaattttaatgaaggccttttctgtatctattgagataatcatgtggtttttatcattggttgtgtttatgtgatagattatgtttgttgatttgcatatgttgaaccagccttacatcccagggatgaagccaatttgatcatggcggataagctttttgatgtactgctagatatgg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2001746 1376 - 8458610 caattttggcttttgttgccattgtttttggcattattgtcatgaagtctttgtccatgcctgtgtcctgaatggtattgcctagtttttcttctagggtttttgtgattttgggttttacatttaagtctttaatccatcttgagttaa-ttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagccccatttgttaaatagggaatcctttccccatttcttgtttttgtcagatttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctattttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctcccgctttgttcttttgtttaggattgtcttggtgatatgggctgttttttggttccatacgaaatttaaagtag-----ttttaaaaaaaattttgcaaagacagtccaggatagtttgatgggaatagcactgaatctataaattactttgggcagtatggccattttcatgatattgattctttctatccatgagcatgtgatgtttttcaatttgtttgtgtcccctcttatttctttgagcagtggtttgtggtttcctttgaagaggtccttcatgtcccttgtaagttgtattcctaggtgttttattctctttgttgcaattgtgaatgggagttcactcatga-caagctctctgcttgtctattgttggtgtataggaatacttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagtttttaggctgagatgctgatgttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgccctttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccttgtcttgtgccattttcaaagggaatgcttaaagcttttgccc------attcagtataatattggctatgggtttgttataaatagttcttattattttgagatatgttccatcaatacctggtttattgagagtttttaacatgaaggatgttgaattttaatgaaggccttttctgtatctattgagataatcatgtggtttttatcattggttgtgtttatgtgatagattatgtttgttgatttgcatatgttgaaccagccttacatcccagggatgaagccaatttgagcatggcggataagctttttgatgtactgctagatatgg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64940718 1376 + 75148670 caattttggcttttgttgcgattgtttttggcatttttgtcatgaagtctttgtccatgcctgtgtcctaaatggtattgcctagtttttcttctagggtttttgtgattttgggttttgcatttaagtctttaatccatcttgagttaa-ttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagtcagttttcccagccccatttgttaaatagggaatcctttccccatttcttgtttttgtcagatttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttttgttccattggtctatatatctattttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctcccgctttgttcttttgtttaggattgtcttggtgatatgggctcttttttggttccatatgaaatttaaagtag-----ttttaaaaaaaattttgtaaagacagtcaaggatagtttgatggaaatagcactgaatctataaattactttgggcagtatggccattttcatgatattgattctttctatccatgagcgtgtgatgtttttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtggtttcccttgaagaggtccttcatgtcccttgtaagttgttttcctaggtgctttattctctttgttacaattgtgaatgggagttcactcatga-caagctctctgcttgtctattgttggtgtataggaatacttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagtttttaggctgagatgctgatgttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgccctttatttctttctcttgcctaattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccttgtcttgtgccattttcaaagggaatgcttctagcttttgccc------attcagtataatattggctatgggtttgttataaatagttcttattattttgagatatgttccatcaatacctggtttattgagagtttttaacatgaaggatgttgaattttaatgaaggccgtttctgtatctattgagataatcatgtggtttttatcattggttgtgtttatgtaatggattatgtttgttgatttgcatatgttgaaccagccttacatcccagggatgaagccaatttgatcatggtggataagctttttgatgtactgctagatatgg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2186587 1375 + 4244037 caattttggcttttgttgccattgtttttggcatttttgtcatgaagtctttgtccatgcctgtgtcctgaatgatattgcctagtttttcttctagggtttttgtgattttgggttttacatttaagtctttagtccatcttgagttaa-ttttgtataaggtgtgaggaaggggtccagttccagttttctgcatatggctagccagttttcccagccccatttgttaaatagggaatcctttccccatttcttgtttttgtcagatttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctattttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctcccgctttgttcttttgtttaggattgtcttggtgatatgggctcttttttggttccatatgaaatttaaagtag-----ttttaaaaaaatttttgcaaagacagtcaaggatagtttgatgggaatagcactgaatctataaattactttgggcagtatggccattttcatgatattgattctttctatccatgagcatgtgatgtttttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtggtttcccttgaagaggtccttcatgtcccttgtaaattgtattcctaggtattttattctctttgttgcaattgtgaatgggag-tcactcatga-caagctctctgcttgtctattgttggtgtataggaatacttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggaatttttaggctgagatgctgatgttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatgccctttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccttgtcttgtgccattttcaaagggaatgtttaaagcttttgccc------attcagtataatattggctatgggtttgttataaatagttcttattattttgagatatgttccatcaatacctggtttattgagagtttttagcatgaaggatgttgaattttaatgaaggccttttctgtatctattgagataatcatgtggtttttatcattggttgtgtttatgtgatggattatgtttgttgatttgcatatgttgaaccagccttacatcccagggatgaagccaatttgatcatggcggataagctttttgatgtactgctagatatgg i manLeu1.NW_012106252v1 I 184 C 0 s colAng1.NW_012122154v1 2207679 1357 + 4569836 caattttggcttttgttgcgattgtttttggcgtttttgtcatgaagtctttgtccatgcctatgtcctgaacggtgttgcctagtttttcttctagggtttttgtgattttgggttttacatttaagtctttaatccatcttgagttag-tttcgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagccccatttgttaaatagggaatcctttccctatttcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtctcagttctgttccattggtctatatatctcttttgataccagtaccatgctgttgtggttacagttgccttgtagtatagtttgaagtcaggtagcatgatgcctcccactttgttcttttgtttaggattgtcttggtgatatgggctcttttttggttccatatgaaatttaaagtag-----ttttaaaaaaaagtttgcaaagaaagtcgaggatagcttgatgggaatagcactgaatctataaattactttgggcagtatggacattttcatgatattgattctttctatccatgagcatgtgatgtttttcaatttgtttgtgtcccctcttatttccttgagcagtggtttgtggtttcccttgaagaggtccttcatgtcccttgtaagttgtattcctaggtgttttattctctttgttgcaattgtgaatgggagttcactcatgatttggctctctgcttgtctattgttggtgtataggaatacttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagtttttaagctgagatgctgatgttttctaaatatagaatcacgtcatctgtaaacaaagacaatttggcctcctctcttcctatctaaatgccctttatttctttctcttgtctgattaccctg--------------------gttgaataggagtggtgagagagagcatccttgtcttgtgccattttcaaagggaatgcttctagcttttgccc------gttcagtataatattagctatgtgtttgtcataaatagttcttactattttgagatatgttccatcaatacctggtttattgagagtttttaacatgaaagatgctgaattttaacgaaggccttttctgtatctattgagataatcatgtggtttttatcattggttgtgtttatgtgatgggttatgtttattgatttgcatatgttggaccagccttacatcccagggatgaagccaatttgatcatggtggataagctttttgatgtactgctagatttgg i colAng1.NW_012122154v1 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 14808 5976 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1879259 12903 + 3513951 T e rheMac8.chr16 30139106 31425 - 77216781 I a score=1094214.000000 s hg38.chr17_JH159148v1_alt 47171 248 + 88070 tttttactaactttactgaggtataat---------tgaataaaaattgtatatatttaaggtataaaaagtgatgttttga------tatatat--atttat----------------agtgagatattcatcacagtgaagctaattcacatattcattagctcacatacttgc----------------------------------------------------catttCAGgtataaaataaaatattttta---cctacagccacactactgtacactaggtctgcagagcttatttaccttgcatacctgaTCTTGGCCAAAGTGAATG s panTro5.chr17 16358239 247 + 83181570 tttttactaactttactgaggtataat---------tgaataaaaattgtatatatttaaggtataaaaagtgatgttttga------tatatat---ttttt----------------agtgagatattcaccacagtgaagctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctacagccacactactgtacactaggtctgcagaacttatttacctcgcataactgaTCTTGGCCAAAGTGAATG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263163 250 + 83442489 tttttactaactttactgaggtataat---------tgaataaaaattgtatatatttaaggtataaaaagtgatgttttga------tatatatatattttt----------------agtgagatattcaccacagtgaagctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctacagccacactactgtacactaggtctgcagaacttatttacctcgcataactgaTCTTGGCCAAAGTGAATG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110114 250 + 4267968 tttttactaactttactgaggtataat---------tgaataaaaattgtatatatttaaggtataaaaagtgatgttttga------tatatatatatttat----------------agcgagatattcaccacagtgaagctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctacagccacactactgtacactaggtctgcagaacttatttaccttgcataactgaTCTTGGCCAAAGTGAATA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098270 248 - 2193130 tttttactgactttactgaggtataat---------tgaataaaaattgtgtatatttaaggtatacaaagtgatgttttga------catatat--atttat----------------agtgaggtattcaccacagtgaagctaattaacatattcattcgctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctatggccacactaccgtacactaggtctgcagaacttattcaccttgcataaccgaTGTTGGCCAAAGTAAATG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055226 275 - 80997621 tttttataaactttattgaggtataattg------atgaataaaaattgtatgtatttaaggtatacaaagtgatgtgtgtgtatatatatatatatacatatatatatagtgagatatagtgagattttcaccacagtgtggctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctataaccacactactgtacagtaggtctacagaacttattcatcttgcataactgaTGTTGGCCAAAGTGAATG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2111743 269 + 10377808 tttttataaactttattgaggtataattg------atgaataaaaattgtatgtatttaaggtatacaaagtgatgtgtgtg------tatatatatacatatatatatagtgagatatagtgagattttcaccacagtgtggctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctataaccacactactgtacagtaggtctacagaatttattcatcttgcataactgaTGTTGGCCAAAGTGAATG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003122 269 - 8458610 tttttataaactttattgaggtataattg------atgaataaaaattgtatgtatttaaggtatacaaagtgatgtgtgtg------tatatatatacatatatatatagtgagatatagtgagattttcaccacagtgtggctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctataaccacactactgtacagtaggtctgcagaacttattcatcttgcataactgaTGTTGGCCAAAGTGAATG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942094 269 + 75148670 tttttataaactttattgaggtataattg------atgaataaaaattgtatgtatttaaggtatacaaagtgatgtgtgtg------tatatatatacatatatatatagtgagatatagtgagattttcaccacagtgtggctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctataaccacactactgtacagtaggtctgcagaacttattcatcttgcataactgaTGTTGGCCAAAGTGAATG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2187962 269 + 4244037 tttttataaactttattgaggtataattg------atgaataaaaattgtatgtatttaaggtatacaaagtgatgtgtgtg------tatatatatacatatatatatagtgagatgtagtgagattttcaccacagtgtggctaattcacatattcattagctcacatacttgc----------------------------------------------------catttcaggtataaaataaagtattttta---gctataaccacactactgtacagtaggtctgcagaacttattcatctttcataactgaTGTTGGCCAAAGTGAATG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2209036 195 + 4569836 tttTTATAaactttattgaggtataattg------atgaataaaaattgtatgtatttaaggtatacaaagtgatgttcgta------tatgtatgtatatat------------------------------------------------------------------------------------------------------------------------------atttcaggtataaaataaagtattttta---gctatagccacactactgtacagtaggtctgcagaacttattcatcttgcataactgaTGTTGGCCAAAGTGAATG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866356 294 + 3513951 Tttttactagctttattgaggcactactgacaaataaaaataaaaattgtgtatatttaatgtgtatgaggtgttgtttcag------gatatatatatttat----------------tgtaaaat------cata-------------atatattccttagctcacgtagttacaatttccttttcacttttatggtgtgaacagctcaggtctaccttcttagaaaatttcaggtatacaataaaacattgttgttcactaaagtcacgttgttgtacactagatctgcagaagttactcatcttgcgatactgaTGTTGGTCAAAA-GAATG i saiBol1.JH378271 T 12903 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 14808 5976 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e dasNov3.JH570468 559538 0 - 852752 C e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=306261.000000 s hg38.chr17_JH159148v1_alt 47419 56 + 88070 TTTTAGGTCTTCATCTCCTTTACCCTGTCACCCCAGAAGAATCA--CAGTCAATGGAT s panTro5.chr17 16358486 56 + 83181570 TTTTAGGTCTTCATCTCCTTTACCCTGTCACCCCAGAAGAATCA--CAGTCAATGGAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263413 56 + 83442489 TTTTAGGTCTTCATCTCCTTTACCCTGTCACCCCAGAAGAATCA--CAGTCAATGGAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110364 56 + 4267968 TTTTAGGTCTTCATCTCCTTTACCCTGTCACCCCAGAAGAATCA--CAGTCAATGGAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098518 56 - 2193130 TTTTAGGTCTTCGTCTCCTTTACCCTGTCACCCAAGAAGAATCA--CAGTCAATGGAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055501 56 - 80997621 TTTTAGGTCTTCATCTTCTTTACCCTGTCACCCAAGAAGAATCA--CAGTCAATGGAT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112012 56 + 10377808 TTTTAGGTCTTCATCTTCTTTACCCTGTCACCCAAGAAGAATCA--CAGTCAATGGAT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003391 56 - 8458610 TTTTAGGTCTTCATCTTCTTTACCCTGTCACCCAAGAAGAATCA--CAGTCAATGGAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942363 56 + 75148670 TTTTAGGTCTTCATCTTCTTTACCCTGTCACCCACGAAGAATCA--CAGTCAATGGAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188231 56 + 4244037 TTTTAGGTCTTCATCTTCTTTACCCTGTTACCCAAGAAGAATCA--CAGTCAATGGAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2209231 56 + 4569836 TTTTAGGTCTTCATCTCCTTCACCCTGTCACCCAAGAAGAATCA--CAGTCAATGGAT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866650 56 + 3513951 TGACAGTTCTTCACCTTCTTTACCCCATCACACAATGACTATCA--CGGTCATTGACC i saiBol1.JH378271 C 0 C 0 s dasNov3.JH570468 559538 55 - 852752 TTTTCATTCTTCACCTGCTTCACCCCATCCCTCATT--GAATCAGCAGGTAGAAAGA- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 6797 7806 - 94492 I e cebCap1.NW_016107543v1 14808 5976 - 4077172 I e canFam3.chr9 39587482 2025 - 61074082 I e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=159043.000000 s hg38.chr17_JH159148v1_alt 47475 19 + 88070 TTTGTCTCTTAGCCAAGTC s panTro5.chr17 16358542 19 + 83181570 TTTGTCTCTTAGCCAAGTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263469 19 + 83442489 TTTGTCTCTTAGCCAAGTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110420 19 + 4267968 TTTGTCTCTTAGCCAAGTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098574 19 - 2193130 TTTGTCTCTTAGCCAAGTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055557 19 - 80997621 TTTGTCTCTTAGCCAAGTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112068 19 + 10377808 TTTGTCTCTTAGCCAAGTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003447 19 - 8458610 TTTGTCTCTTAGCCAAATC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942419 19 + 75148670 TTTGTCTCTTAGCCAAGTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188287 19 + 4244037 TTTGTCTCTTAGCCAAGTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2209287 19 + 4569836 TTTGTCTCTTAGCCAAGTC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866706 19 + 3513951 TTTGTCTGTTAGCTGAGTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20784 19 - 4077172 TTTGTCTGTTAGCCAAGTC i cebCap1.NW_016107543v1 I 5976 C 0 s aotNan1.NW_018505111v1 14603 19 - 94492 TTTGTCTCTTAGCCAAGTC i aotNan1.NW_018505111v1 I 7806 C 0 s dasNov3.JH570468 559593 19 - 852752 TCAGATTTTTGGCTGACTC i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 39587482 2025 - 61074082 I e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=2381095.000000 s hg38.chr17_JH159148v1_alt 47494 327 + 88070 TCCAAAGCACTCTAGGTACACAGTCTCAGAAGTTGGGATCCGTCCTGGAAGTCTACATCGTTAGCTCATCAGAGGTATTTCTAGCACTCCCATGCTGGTAGGAGGTCCCACAAAGGTAATCCAGGTCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGTCCTTCCATTAGTGAATGCTTGGGTTGCATCATCAGTTCAGGGCCAAAAGCACCAGCCATCTGCCTATCATGACTTCTATGAATGTACACA------TTTTTCTACTTTCAGTCCGTCTTACATTCTTCTGATTTCCCTGAAAACACAAATGTTTATTTCCTTTAGA s panTro5.chr17 16358561 327 + 83181570 TCCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGGATCCGTCCTGGAAGTCTACATCGTTAGCTCATCAGAGGTATTTCTAGCACTCCCATGCTGGTAGGAGGTCCCACAAAGGTAATCCAGGTCCCAGACTTTTCTATTTCTCTCAGAACCAGTATAAATCAGTCCTTCCATTAGTGAATGCTTGGGTTGCATCATCAGTTCAGGGCCAAAAGCACCAGCCGTCTGTCTATCATGACTTCTAAGAATGTACACA------TTTTTCTACTTTCAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACACAAATCTTTATTTCCTTTAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263488 327 + 83442489 TCCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGGATCCGTCCTGGAAGTCTACATCGTTAGCTCATCAGAGGTATTTCTAGCACTCCCATGCTGGTAGGAGGTCCCACAAAGGTAATCCAGATCCCAGACTTTTCTATTTCTCTCAGAACCAGTATAAATCAGTCCTTCCATTAGTGAATGCTTGGGTTGCATCATCAGTTCAGGGCCAAAAGCACCAGCCGTCTGTCTATCATGACTTCTAAGAATGTACACA------TTTTTCTACTTTCAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACACAAATCGTTATTTCCTTTAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110439 325 + 4267968 TCCAAAGCATTCTAGGTACACAGTCTCAGAAGCTGGGATCCGTCCTGGAAGTCTACATCGTTAGCTCATCAGAGGTATTTCTAGCACTCCCATGCTGGTAGGAGGTCCCACAAAGGTAA--CAGGTCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGCCCTTCCATTAGTGAATGCTTGGGTTGCATCATCAGTTCAGGGCCAAAAGAACCAGCCATCTGTCTATCATGACTTCTATGAATGTACACA------TTTTTCTACTTTCAGTCCTTCTTATATTCTTCTGATTTCCCTGAAAACACAAATCTTTATTTCCTTTAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098593 327 - 2193130 TTCAAAGCATTTGAGGTACACAGTCTCAGAAGTTGGCACCTGTCCTGGAAGTCTACATTGTTAGCTCATCAGAGGTATTTCTAGCACTCCCATGCTGGTAGGAGGTCCCACAAAGGTAACCCAGGTCCCCGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGTCCTTCCATTAGTGAATGCTTGGGTTGCATCACCAGTTCAGGGCCAAAAGCACCAGCCATCTGTCTACCATGACTTCTATGAATGTACACA------TTTTTCTACTTTCAGTCCTTCTTACATTCTTCTGATTTCTCTGAAAACACAAACCTTTATTTCCTTTAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055576 326 - 80997621 TTCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGCATCTGTCCTGGAAGTCTACATTGTTAGGTCATCAGAGGTATTTCTAGCACTTCCATGCTGGTAGGAGGTCCCACAAAGGTAACCCAGGCCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGTCCTTCCATTAGTGAATACTT-GGTTGCATCATCAGTTTGGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGCACACA------TTTTTCTACTTTTAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACGCAAATCTTTATCTCCTTTAGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112087 326 + 10377808 TTCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGCATCTGTCCTGGAAGTCTACATTGTTAGGTCATCAGAGGTATTTCTAGCACTTCCATGCTGGTAGGAGGTCCCACAAAGGTAACCCAGGCCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGTCCTTCCATTAGTGAATACTT-GGTTGCATCATCAGTTTGGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGCACACA------TTTTTCTACTTTTAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACGCAAATCTTTATTTCCTTTAGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003466 326 - 8458610 TTCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGCATCTGTCCTGGAAGTCTACATTGTTAGGTCATCAGAGGTATTTCTAGCACTTCCGTGCTGGTAGGAGGTCCCACAAAGGTAACCCAGGCCCCAGACTTTTCTGTTTCTCTCAGAGCCAGTATAAATCAGTCCTTCTATTAGTGAATACTT-GGTTGCATCATCAGTTTGGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGCACACA------TTTTTCTACTTTTAGTCCTTCTTACATTCTTCTTATTTCCCTGAAAACACAAATCTTTATTTCCTTTAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942438 327 + 75148670 TTCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGCATGTGTCCTGGAAGTCTACATTGTTAGGTCATCAGAGGTATTTCTAGCACTTCCATGCTGGTAGGAGGTCCCACAAAGGTAACCCAGGCCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCGGTCCTTCCATTAGTGAATACTTGGGTTGCATCATCAGTTTGGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGAACACA------TTTTTCTACTTTTAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACACAAATCTTTATTTCCTTGAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188306 327 + 4244037 TTCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGCATCTGTCCTGGAAGTCTACATTGTTAGGTCATCAGAGGTATTTCTAGCACTTCCATGCTGGTAGGAGGTCCCACAAAGGTAACCCAGGCCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGTCCTTCCATTAGTGAATACTTGGGTTGCATCATCAGTTTGGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGCACACA------TTTTTCTACTTTTAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACACAAATCTTTATTTCCTTTAGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2209306 327 + 4569836 TTCAAAGCATTCTAGGTACACAGTCTCAGAAGTTGGCATCTGTCCTGGAAGTCTACATTGTTAGGTCATCAGAGGTATTTCTAGCACTTCCATGCTGGTAGGAGGTCCCACAAAGGCAACCCAGGCCCCAGACTTTTCTATTTCTCTCAGAGCCAGTATAAATCAGTCCTTCCATTAGTGAATACTTGGGTTGCATCATCAGTTCAGGGCCAACAGCACCAGCCATCTGTCTACCATGACTTCGATGAATGCACACA------TTTTTCTACTTTTAGTCCTTCTTACATTCTTCTGATTTCCCTGAAAACACAAATCTTTATTTCCTTTAGA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866725 315 + 3513951 TTCAGAGCATTCTAGATACACCACCTCAGAAGTTGGCATCTGTCTTGGAAACCTACACTGTTAGCTCATCAGAGGTATTTTTACCCTTCTCATGCTGGTAGGTGGTCCTACGATGGTGGCCCAGGCCCCTAACTTTTCTAATTCTCTTAGGGCCAATATCACTCAATCATTGCAGGACTGAATAATTCCATTGTATCATCAGTTCAGGAACAAAAGTACCAGTCTTCCATCTATCGTGTCTTCCACGGATGAAAAAGAAAAAGTTCTGCCACTTTTCCTATTTCTTAAATTCTACTGATTTCCCTGGAAA------------------TCAGA i saiBol1.JH378271 C 0 I 18627 s cebCap1.NW_016107543v1 20803 320 - 4077172 TTCAGAGCATTCTAGATTCGCAGTATCAGAAGCTGGCATCTGTCATGGAAATCTACATTGGTAGCTCATCAGATATATTTCTACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGATCCCCGACTTTTCTATTTCTCTCAGAGCCATGATTAATCAATCCTTCCATAAGTGAATGCTTAGCTTG---CATCAGCTCAGGACCAAAAGCACCAATC-TCTGTCTATCATGGTTTCTAAGAATGCACAAG---------TTCTACTTTTCTCCTTTCTTACATTCTTCTGATTTCCCTGAAAACACAAGATTTTAGTTTCTTTGGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14622 312 - 94492 TTCAGAGCATTCTAGATTCACAGTCTCAGAAGCTGGCATCTGTCATGGAAATCTACACTGGTAGCTCATCAGAGGTATTTCTACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGCGACCCAGGTCCCCGACTTTTCTATTTCACTCAGGGCCATGATTAATCAGTCCTTCCATAAGTGAATGCTTAGCTCG---CATCAGCTCAGGACCGAAAGCACCAACC-TCTGTCTATCATGGTTTCTATGAATGCACAAG---------TTCTGCTTTTCTCTTTTCTTACATTCTTCTGATTTCCCTGGAAACAC--------AGTTTCTTTAGA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21519874 302 + 61074082 TCCAGAGCCTCCTGGAGAGCAAGTCTCCAATGTTGGAGTGTGCCTGGGGCAGGAGCCTTCCTAGCTCTACAAAGGTCCCTCTAGGGCTCCCAGG-------------------AGGTGACCCAGGGCCTAGG-TCTCCTCTTCCTCTCAAAGCC----TGAATCAAACCTCAGATACCTTAGTATCAAGGCAGCACCATTAGTTCAGGAGCAGAAGTGCCAGCCCTTTGTCTATCATGACTCCTATGAATGCCCACA------TTCTTTTCTCTTTCTTCTTCCTCATATTTGTCCCATCCCCCT-AGAACAGGCAGCTTTCTTTCCCTCCAA i canFam3.chr9 I 38610 C 0 s dasNov3.JH570468 559612 268 - 852752 CTCAAAGCCTTCCAGACATACACTTTTGGATATGGTGTTTTTCCCTCATTACATATACTGTTAACTCATCAGAGGTAT-------ACTTCTA------------------------------AAGTCTCT-ACCCTTCTTTTATGCCCA-AGCCAGTA----CCAGGCTTTAATCTAATGAATACTTATGTAGCATCTTTTCTTCACCACTAAAA-TATCAGCCTTCTGTCTGTCATAACTCTGATGAGTGCACATT------TTTTAATACT--------------CAAATATATGTTTCCCATGCAGACG-GGCTTTTTATTTCCCTTGGA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=44322.000000 s hg38.chr17_JH159148v1_alt 47821 5 + 88070 TGCTT s panTro5.chr17 16358888 5 + 83181570 TGCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263815 5 + 83442489 TGCTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110764 5 + 4267968 TGTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098920 5 - 2193130 TGCTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055902 5 - 80997621 TGTTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112413 5 + 10377808 TGTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003792 5 - 8458610 TGTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942765 5 + 75148670 TGTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188633 5 + 4244037 TGTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2209633 5 + 4569836 TGATT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1885667 5 + 3513951 TGCTT i saiBol1.JH378271 I 18627 C 0 s cebCap1.NW_016107543v1 21123 5 - 4077172 TGCTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14934 5 - 94492 TGCTT i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520176 5 + 61074082 TGCTT i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 559880 5 - 852752 TACTT i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=99526.000000 s hg38.chr17_JH159148v1_alt 47826 17 + 88070 AATTTTGGCCTCATAAA s panTro5.chr17 16358893 17 + 83181570 AATTTTGGCCTCATAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263820 17 + 83442489 AATTTTGGCCTCATAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110769 17 + 4267968 AATTTTGGCCTCATAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098925 17 - 2193130 AATTTTGGCCTCATGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055907 17 - 80997621 AATTTTGGCCTCATAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112418 17 + 10377808 AATTTTGGCCTCATAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003797 17 - 8458610 AATTTTGGCCTCATAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942770 17 + 75148670 AATTTTGGCCTCATAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188638 17 + 4244037 AATTTTGGCCTCATAAA i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1885672 17 + 3513951 CATGTTGGTCTCACAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21128 17 - 4077172 CATGTTGGCCTCACAAA i cebCap1.NW_016107543v1 C 0 T 6286 s aotNan1.NW_018505111v1 14939 17 - 94492 CATGTTGGCCTCACAAA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520184 14 + 61074082 AGTTCCTGCACCAA--- i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 559885 16 - 852752 CCTTTTTACCTCAAGA- i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=157068.000000 s hg38.chr17_JH159148v1_alt 47843 36 + 88070 GCATAGAAGATTGTTTTAACCCATTAGATAACTCAG s panTro5.chr17 16358910 29 + 83181570 AC-------ATTGTTTTAACCCATTAGATAGCTCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263837 29 + 83442489 AC-------ATTGTTTTAACCCATTAGATATCTCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110786 36 + 4267968 ACATAGAAGATTATTTTAACCCATTAGATAGCTCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098942 36 - 2193130 ACATAGAAGATTGTTGTAACCCATTAGATAGCTCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055924 36 - 80997621 ACATAGAAGATTGTTTTAACCCATCAGATAGCTCAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112435 36 + 10377808 ACATAGAAGATTGTTTTAACCCATCAGATAGCTCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003814 36 - 8458610 ACATAGAAGATTGTTTTAACCCATCAGATAGCTCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942787 36 + 75148670 ACATAGAAGATTGTTTTAACCCATCAGGTAGCTCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188655 36 + 4244037 ACATAGAAGATTGTTTTAACCCATCAGATAGCTCAG i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1885689 32 + 3513951 ATGCAGAAGG----TTTATTCCCTTCCTTGGCTCAG i saiBol1.JH378271 C 0 T 18681 s aotNan1.NW_018505111v1 14956 36 - 94492 ATGCAGAAGGTTGTTTTATTCCCTTCCTTGGCTCAG i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520198 36 + 61074082 ATGCCAGAGATTGTTTTGTTCCCTTCTATGATTCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 559901 36 - 852752 AAACAGGTGGTGGTTTAGTTTCCTTAGATGGTCAAG i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=502474.000000 s hg38.chr17_JH159148v1_alt 47879 89 + 88070 AGATTATGGATTATGCAAAG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCTAAACTTTGTCCTTACTTAATTTTCCTGATAACATTT s panTro5.chr17 16358939 89 + 83181570 AGATTATGGATTATGCAAAG---TCATATGCGCCTGTTGCATAGTGTCTCAATCCTAAACTTTGTCCTTATTTAATTTTCCTGATAACATTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263866 89 + 83442489 AGATTATGGATTATGCAAAG---TCATATGCGCCTGTTGCATAGTGTCTCAATCCTAAACTTTGTCCTTATTTAATTTTCCTGATAACATTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110822 89 + 4267968 AGATTATGGATTATGCAAAG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCTAAACTTTGTCCTTACTTAATTTTCCTGATAACATTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2098978 89 - 2193130 AGATTATGGATTATGCAAAG---TCATATGTGCCTGTTGCATGGTGTCTCAATCCCAAACTTTGTCCTTACTTAATTTTCCTGATAACATTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28055960 87 - 80997621 AGATTATGGATTATGC--AG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCCAAACTTTGTCCTTACTTAATTTTCCTGACAGCATTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112471 87 + 10377808 AGATTATGGATTATGC--AG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCCAAACTTTGTCCTTACTTAATTTTCCTGACAGCATTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003850 87 - 8458610 AGATTATGGATTATGC--AG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCCAAACTTTGTCCTTACTTAATTTTCCTGACAGCATTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942823 87 + 75148670 AGATTATGGATTATGC--AG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCCAAACTTTGTCCTTACTTAATTTTCCTGACAGCATTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188691 87 + 4244037 AGATTATGGATTATGC--AG---TCATATGTGCCTGTTGCATAGTGTCTCAATCCCAAACTTTGTCCTTACTTAATTTTCCTGACAGCATTT i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1867040 88 + 3513951 AGATTATGGTTTGTGCAAAG---CCATACATGCCCACTCGATAGTCCCTCAATCCCTAAATATGTT-TTACATAATTTTCCTAGTAACAGTT i saiBol1.JH378271 T 18681 I 2 s aotNan1.NW_018505111v1 14992 89 - 94492 AGATCATGGATTGTGCCAAG---TCTTACACGCCCATTGCATAGTTTCTCAATTCCCAGCTTTGTTCTTACTTAATTTTCCTCATAACGTTT i aotNan1.NW_018505111v1 C 0 T 6562 s canFam3.chr9 21520234 92 + 61074082 AGGTCCTGCATTACTCCAAGTCATCATACATGCCCACTGCACAGGCGCTTGGTCCGAGATCTTCCCCTTCCTTCCTTTTCTTGGGGACATGT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 559937 89 - 852752 AGATTTTGAATTGATCAAAA---TCACACAAGCACATTGTACTGTTTTCAGTTGTCAAGATTTATCCTTACTTAATTTTCTTAGTAATGCTT i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=311070.000000 s hg38.chr17_JH159148v1_alt 47968 72 + 88070 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAAGGTATGGTCTGTATTTTACATGGAATTACTTAATTCC s panTro5.chr17 16359028 72 + 83181570 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAAGGTATGGTCTGTATTTTACATGGAATTATTTAATTCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16263955 72 + 83442489 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAAGGTATGGTCTGTATTTTACATGGAATTATTTAATTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110911 72 + 4267968 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAAGGTATGGTCTGTATTTTACATGGAATTACTTAATTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2099067 72 - 2193130 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------G--TAAGGTATGGTCTGTATTTTACATGGAATTACTTAATTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28056047 72 - 80997621 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAATGTATGGTCTGTGTTTTACATGGAATTACTTAATTCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112558 72 + 10377808 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAATGTATGGTCTGTGTTTTACATGGAATTACTTAATTCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2003937 72 - 8458610 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAATGTATGGTCTGTGTTTTACATGGAATTACTTAATTCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942910 72 + 75148670 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAATGTATGGTCTGTGTTTTATGTGGAATTACTTAATTCC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188778 72 + 4244037 TTATCAGGAAGTCAAATTGTCTAAATGTTGC------A--TAATGTATGGTCTGTGTTTTACATGGAATTACTTAATTCC i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1867130 65 + 3513951 ATTTCAGGGA--CAATTTGACTTAATGTTGC------T--TAATGCATTGTCCACATTTTAGAGGAAA-----TAATTTC i saiBol1.JH378271 I 2 C 0 s canFam3.chr9 21520326 68 + 61074082 TGATCATAATGCCAAATT------ACATTCC------AGCTGGGGAGCAGGATGTGTTTGGCAGAAAGTTGCCTGATGCC i canFam3.chr9 C 0 I 120 s dasNov3.JH570468 560026 70 - 852752 TGATCAAGG---CAAATTG----AAAGCTGTTAGAGAA--CAATATCTTGTCTAGGATCAGCAGGCATTTAGTTATTCC- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=14532.000000 s hg38.chr17_JH159148v1_alt 48040 3 + 88070 ATT s panTro5.chr17 16359100 3 + 83181570 ATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16264027 3 + 83442489 ATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110983 3 + 4267968 ATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2099139 3 - 2193130 ATT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28056119 3 - 80997621 ATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112630 3 + 10377808 ATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2004009 3 - 8458610 ATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942982 3 + 75148670 ATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188850 3 + 4244037 ATT i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1867195 3 + 3513951 GTT i saiBol1.JH378271 C 0 C 0 s dasNov3.JH570468 560096 3 - 852752 CTT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e canFam3.chr9 21520394 120 + 61074082 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=346429.000000 s hg38.chr17_JH159148v1_alt 48043 86 + 88070 TTGCTCTTTCAATGAAATTT--CAGC----AGGAGGCCAGATATGAATTTGATTTATTTGATACGAAG----GAATT-------------AGTCTCTTCAAATGAGGAT s panTro5.chr17 16359103 86 + 83181570 TTGCTGTTTCAATGAAATTT--CAGG----AGGAGGCCAGATATGAATTTGATTTATTTGATACGAAG----GAATT-------------AGTCTCTTCAAATGAGGAT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16264030 86 + 83442489 TTGCTGTTTCAATGAAATTT--CAGG----AGGAGGCCAGATATGAGTTTGATTTATTTGACACGAAG----GAATT-------------AGTCTCTTCAAATGAGGAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4110986 86 + 4267968 TTGCTCTTTCAATGAAATTT--TAGG----AGGAGGCCAGATATGAATTTGATTTATTTGATAAGAAG----GAATT-------------AGTCTCTTCAAATGAGGAT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2099142 86 - 2193130 TTGCACTTTCAAAGAAATTT--CAGG----AGGAGGCCAGATATGAATTTGATTTATATGATACGAAG----GAATT-------------AGTCTCCTCAAATGAGGAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28056122 89 - 80997621 TTGCTCTTTCAATGAAATTT--CAGG-AGAAGGAGGCCAGATATGAATTTGATTTATGTGATACAAAG----GAATT-------------AATCTATTCAGAAGAGGAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112633 89 + 10377808 TTGCTCTTTCAATGAAATTT--CAGG-AGAAGGAGGCCAGATATGAATTTGATTTATGTGATACAAAG----GAATT-------------AATCTATTCAGAAGAGGAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2004012 86 - 8458610 TTGCCCTTTCAATGAAATTT--CAGG----AGGAGTCCAGATATGAATTTGATTTATGTGATACAAAG----GAATT-------------AATCTATTCAGAAGAGGAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64942985 89 + 75148670 TTGCTCTTTCAATGAAATTT--CAGG-AGAAGGAGGTCAGATATGAATTTGATTTGTGTGATACAAAG----GAATT-------------AATCTATTCAGAAGAGGAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188853 89 + 4244037 TTGCTCTTTCAATGAAATTT--CAGG-AGAAGGAGGCCAGATATGAATTTGATTTATGTGATACAAAG----GAATT-------------AATCTATTCAGAAGAGGAC i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1867198 93 + 3513951 TTGCTTTGTCAACAGGTATC--CAGG-AGAGGGAAGCCATATACGAATATTATTTACATGATATAAATTCTCAGATC-------------AGACTCTCTTTCTTGGGAC i saiBol1.JH378271 C 0 C 0 s canFam3.chr9 39589507 100 - 61074082 TTACTATATTGAGAGAGATT--TAGT-AGAAGGAGGCTATTCA-GAATTGGATTTACACAATACAGAG----AAAGTCAGTTTAGATAAGAGTCTCTCTTG-TGAGGAC i canFam3.chr9 I 2025 C 0 s dasNov3.JH570468 560099 87 - 852752 ----TTATCCATTGACATGTGCTAGGAAGAAAGATGTCACACA-GAATTTGTTTTGCACAAGACCATG----GAACA-------------GGTCCCTTTAGAAGAGCAT i dasNov3.JH570468 C 0 I 34 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=78865.000000 s hg38.chr17_JH159148v1_alt 48129 17 + 88070 ATGATGCATTCTGAAAA s panTro5.chr17 16359189 17 + 83181570 ATGATGCATTCTGAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16264116 17 + 83442489 ATGATGCATTCTGAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4111072 17 + 4267968 ATGATGCATTCTGAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2099228 17 - 2193130 ACGATGCATTCTGAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28056211 17 - 80997621 ACGATGCATTCTGAAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112722 17 + 10377808 ACGATACATTCTGAAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2004098 17 - 8458610 ACGATGCATTCTGAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64943074 17 + 75148670 ACGATGCATTCTGAAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188942 17 + 4244037 ATGATGCATTCTGAAAA i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1867291 17 + 3513951 AGAATGCATTCTCACAA i saiBol1.JH378271 C 0 C 0 s canFam3.chr9 39589607 17 - 61074082 ACAGTGGATGCTAACTA i canFam3.chr9 C 0 T 2106 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=6940.000000 s hg38.chr17_JH159148v1_alt 48146 3 + 88070 GTT s panTro5.chr17 16359206 3 + 83181570 GTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16264133 3 + 83442489 GTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4111089 2 + 4267968 G-T i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2099245 3 - 2193130 GTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28056228 3 - 80997621 GTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112739 3 + 10377808 GTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2004115 3 - 8458610 GTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64943091 3 + 75148670 GTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188959 3 + 4244037 GTT i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1867308 3 + 3513951 ATG i saiBol1.JH378271 C 0 I 12313 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=3458549.000000 s hg38.chr17_JH159148v1_alt 48149 893 + 88070 TTTGATGTGtcctcttgaaaaccagaacaaggcaaacatgccatatctcaccactcctattcaaaatagtaatgaaagtcctagccagagaaatatggcaagagaaataaagtaaaggtatctagataggaaaagtggaagttaaactatctctgtgtgtgaagaagattttacacccagaaaacctcattgtctctacccaaaaactccttgatctgattagcaacttcagcaaagtttcaggatacaaaattattgtacaaaaatcagtagcattcctatacaccaacaacatccaagttgagagccaaatcaataatgtaatccttttcacaatagccac-aaaaaacaacaaaatacctaggaatacagccaaccagggaggtgaaagatctctgcaacaagaattgcaaaacactgctcaaagaaattaaagatgacacaaacaaattgaaacatattttatgctcatgggtagaaagaatcaatattgttaaaatggccatactccctaaagcaatttacagattcagtatcactcctatcaaactaccaatgacagccttcacagaatgag-a-aaaaaaatgttttacaattcatatggaaccaaaaaagagcctgaatggccaaggcaatcctaagcaaaaataacaaagctgaagacatcacattatctgacttcaaactacattac-aggctgcaataaccaaaaccgcatggtactggtacaaaaacagacacacagaccaatggaacagaatacagagcccagaaataatgttgcacacctacaacatgtgatcttcagcaaagttgatgaaaataggcagtgggga-aaagactcctgatttaataaatggtgctga------gataactggctagtcatttgcagaaga s panTro5.chr17 16359209 894 + 83181570 TTTGATGTGtcctcttgaaaaccagaacaacgcaaacatgccatatctcaccactcctattcaaaatagtaatgaaagtcctagccagagaaatatggcaagagaaataaagtaaaggtatctagataggaaaagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcattgtctctacccaaaaactccttgatctgattagcaacttcagcaaagtttcaggacacaaaattattgtacaaaaatcagtagcattcctatacaccaacaacatccaagttgagggccaaatcaataatgtaatccttttcacaatagccac-aaaacacaacaaaatacctaggaatacagccaaccagggaggtgaaagatctctacaacaagaattgcaaaacactgctcaaagaaattaaagatgacacaaacaaattgaaacacattttatgctcatgggtagaaagaatcagtattgttaaaatggccatactccctaaagcaatttacagattcagtatcactcctatcaaactaccaatgacagccttcacagaatgagaa-aaaaaaaagttttacaattcatatggaaccaaaaaagagcctgaatggccaaggcgatcctaagcaaaaataacaaagctgaagacatcacattatctgacttcaaactacattac-aggctgcaataaccaaaacctcatggtactggtacaaaaacagacacatagaccaatggaacagattacagagcccagaaataatgttgcacacctacaacatgtgatcttcagcaaagttgatgaaaataggcagtgggga-aaagactcctgatttaataaatggtgttga------gataactggctagtcatttgcagaaga i panTro5.chr17 C 0 C 0 s panPan2.chr17 16264136 894 + 83442489 TTTGATGTGtcctcttgaaaaccagaacaatgcaaacatgccatatctcaccactcctattcaaaatagtaatgaaagtcctagccagagaaataaggcaagagaaataaagtaaaggtatctagataggaaaagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcattgtctctacccaaaaactccttgatctgattagcaacttcagcaaagtttcaggacacaaaattattgtacaaaaatcagtagcattcctatacaccaacaacatccaagttgagggccaaatcaataatgtaatccttttcacaatagccac-aaaacacaacaaaatacctaggaatacagccaaccagggaggtgaaagatctctacaacaagaattgcaaaacactgctcaaagaaattaaagatgacacaaacaaattgaaacacattttatgctcatgggtagaaagaatcagtattgttaaagtggccatactccctaaagcaatttacagattcagtatcactcctatcaaactaccaatgacagccttcacagaatgagaa-aaaaaaaagttttacaattcatatggaaccaaaaaagagcctgaatggccaaggcgatcctaagcaaaaataacaaagctgaagacatcacattatctgacttcaaactacattac-aggctgcaataaccaaaacctcatggtactggtacaaaaacagacacatagaccaatggaacagattacagagcccagaaataatgttgcacacctacaacatgtgatcttcagcaaagttgatgaaaataggcagtgggga-aaagactcctgatttaataaatggtgctga------gataactggctagtcatttgcagaaga i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4111091 894 + 4267968 TTTGATGTGtcctcttgaaaaccagaacaaggctaacatgccatatctcaccactcctattcaaaatagtaatgaaagtcctagccagagaaatatggcaagagaaataaagtaaaggtatctagataggaaaagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcattgtctctacccaaaaactccttgatctgattagcaacttcagcaaagtttcaggatataaaattattgtacaaaaatcagtagcattcctatacaccaacaacatccaagttgagagccaaatcaataatgtaatcctttccacaatagccac-aaaaaacaacaaaatacctaggaatacagccaaccagggaggtgaaagatctctacaacaagaattgcaaaacactgctcaaagaaattaaagatgacacaaacaaattgaaacacattttatgctcatgggtagaaagaatcaatattgttaaaatggccgtactccctaaagcaatttacagattcagtatcactcctatcaaactaccaatgacagccttcacagaatgagaa-aaaaaaatgttttacaattcatatggaaccaaaaaagagcctgaatggccaaggccatcctaagcaagaataacaaagctgaagacatcacattatctgacttcaaactacattac-aggctgcaataaccaaaaccgcatggtactggtacaaaaacagacacatagaccaatggaacagaaaacagagcccagaaataatgtggcacacctacaacatgtgatcttcagcaaagttgatgaaaataggcagtgggga-aaagactcctgatttaataaatggtgctga------gttaactggctagtcatttgcagaaga i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2099248 893 - 2193130 TTTGATGCGtcctcttgaaaaccagaacaagacaaacatgccatatctcaccactcctattcaaaatagtaatggaagttctagccagagaaatatggcaagagaaataaaataaaggtatctagataggaaaagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcatagtctctacccaaaagctccttgatctaattggcaacttcagcaaagtttcaggatactaaattattgtacaaaaatcagtagtattcctatacaccaacaacatcccagttaagagccaaatcaataatgtaatccttttcacaatagccac-aaaaaacaacaaaatacctaagaatacagcccacctgggaggtgaaagatctctacaacaagaattgcaaaacactgctcaaagaaattaaagatgacacaaacaaactgaaacacattttatgctcatgggtagaaagaatcaatattgttaaaatgaccatactccctaaagcaatgtaccgattcaatatcattcctatcaaactaccaatgacaaccttcacagaatgag-g-aaaaaaatgttttacaattcatgtggaaccaaaaaagagcctgaatggccaaggcaatcctaagcaaaaataacaaagctgaagacatcacattatctgacttcaaactacattac-aggctacaataaccaaaactgcatggtactggtacaaaaacagacacatagaccaatgggacagaatacagagcccagaaataatgttgcacacctacaacatgtgatcttcagcaaagctgatgaaaataggcaatgggga-aaagactcctgatttaataagtggtgctga------gataactggctagtcatttgcagaaga i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28056231 893 - 80997621 TTTGATGCAAcctcttgaaaaccagaacaagacaaacatgccatatcttaccagtcctattcaaaatagtaatggaagtcctagccagagaaatatggcaagagaaagaaattaaaggtatctagataggaagagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcatagtctctacccaaaagctccttgatctgattagcaacttcagcaaagtttcaggatacaaaattattgtagaaaaatcagtagcattcctatacaccaacaacatccaagctgagagcaaaatcaataatgtaatccttttcacaatagccac-aaaaaacaacaaaatacctaggaatacagccaaccagggaggtgaaaaatc-ctacaacaagaattgcaaaacactgctcaaagaaattagagatgacaaaaacaaattgaaacacattttatgttcatgggtagaaagaatcaatattgttaaagtggccatactccctaaaacaatttacagattcaatattactcctatcaaactaccaatgacagccttc-cagcatgat-g-aaaaaaatgttttacaattcatatggaaccaaaaaagagtctgaatggccaaggcaatcataagcaaaaataacaaagctgaagacgtcacattatctgacttcaaactacattacaaggctacaataaccaaaaccacatggtactggtacaaaaacagacacatagaccagtggaacagaatacagaacccagaaataatgttgcacacctacaacatgtggtctttagcaaagttgatgaaaacaggcaatggggaaaaagactccttatttaataaatggtgctga------gataactggctagccatttgcagaaga i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2112742 894 + 10377808 TTTGATGCAAcctcttgaaaaccagaacaagacaaacatgccatatcttaccagtcctattcaaaatagtaatggaagtcctagccagagaaatatggcaagagaaagaaattaaaggtatctagataggaagagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcatagtctctacccaaaagctccttgatctgattagcaacttcagcaaagtttcaggatacaaaattattgtagaaaaatcagtagcattcctatacaccaacaacatccaagctgagagcaaaatcaataatgtaatccttttcacaatagccacaaaaaaacaacaaaatacctaggaatacagccaaccagggaggtgaaaaatc-ctacaacaagaattgcaaaacactgctcaaagaaattagagatgacaaaaacaaattgaaacacattttatgttcatgggtagaaagaatcaatattgttaaagtggccatactccctaaaacaatttacagattcaatattactcctatcaaactaccaatgacagccttc-cagcatgat-g-aaaaaaatgttttacaattcatatggaaccaaaaaagagtctgaatggccacggcaatcataagcaaaaataacaaagctgaagacgtcacattatctgacttcaaactacattacaaggctacaataaccaaaaccacatggtactggtacaaaaacagacacatagaccagtggaacagaatacagaacccagaaataatgttgcacacctacaacatgtggtctttagcaaagttgatgaaaacaggcaatggggaaaaagactccttatttaataaatggtgctga------gataactggctagccatttgcagaaga i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2004118 895 - 8458610 TTTGATGCAAcctcttgaaaaccagaacaagacaaacatgccatatcttaccagtcctattcaaaatagtaatggaagtcctatccagagaaatatggcaagagaaagaaattaaaggtatctagataggaagagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcatagtctctacccaaaagctccttgatctgattagcaacttcagcaaagtttcaggatacaaaattattgtagaaaaatcagtagcattcctatacaccaacaacatccaagctgagagcaaaatcaataatgtaatccttttcacaatagccac-aaaaaacaacaaaatacctaggaatacagccaaccaaggaggtgaaaaatc-ttacaacaagaattgcaaaacactgctcaaagaaattagagataacaaaaacaaattgaaacacattttatgttcatgggtagaaagaatcaatattgctaaagtggccatactccctaaaacaatttacagattcaatattactcctatcaaactaccaatgacagccttcacagcatgat-gaaaaaaaatgttttacaattcatatggaaccaaaaaagagcctgaatggccaaggcaatcataagcaaaaataacaaagctgaagacatcacgttatctgacttcaaactacattacaaggctacaataaccaaaaccacatggtactggtacaaaaacaggcacatagaccagtggagcagaatacagaacccagaaataatgttgcacacctacaacatgtggtcttcagcaaagttgatgaaaacaggcaatggggagaaagactccttatttaataaatggtgctga------gataactggctagccatttgcagaaga i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64943094 898 + 75148670 TTTGATGCAAcctcttgaaaaccagaacaagacaaacatgccatatcttaccagtcctattcaaaatagtaatggaagtcctagccagagaaatatggtaagagaaagaaattaaaggtatctagataggaagagtggaaattaaactatctctgtgtgtgaataagattttacacccagaaaacctcatagtctctacccaaaa-ctccttgatctgattagcaacttcagaaaagtttcaggacacaaaattattgtagaaaaatcagcagcattcctatacaccaacaacatccaagctgagagcaaaatcaacaatgtaatccttttcacaatagccac-aaaaaacaacaaaatacctaggaatacagccaaccagggaggtgaaaaatc-ctacaacaagaattgcaaaacactgctcaaagaaattagagatgacaaaaacaaattgaaacacattttatgttcatgggtagacagaatcaatattgttaaagtggccatactccctaaaacaatttacagattcaatattactcctatcaaactaccaatgacaggcttc-cagcatgat-g-aaaaaaatgttttacaattcatatggaaccaaaaaagagtctgaatggccaaggcaatcataagcaaaaataacaaagctgaagacgtcacattatctgacttcaaactacattacaaggctacaataaccaaaaccacatggtactggtacaaaaacagacacatagaccagtggaacagaatacagaacccagaaataatgttgcacacctacaacatgtggtctttagcaaagttgatgaaaacaggcaatggggaaaaagactccttatttaataaatggtgctggctatttaataactggctagccatttgcagaaaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2188962 893 + 4244037 TTTGATGCAAcctcttgaaaaccagaacaagacaaacatgccatatcttaccagtcctattcaaaatagtaatggaagtcctagccagagaaatatggcaagagaaagaaattaaaggtatctagataggaagagtggaagttaaactatctctgtgtgtgaataagattttacacccagaaaacctcatagtctctacccaaaagctccttgatctgattagcaacttcagcaaagtttcaggatacaaaattattgtagaaaaatcagtagcattcctatacaccaacaacatccaagctgagagcaaaatcaataatgtaatccttttcacaatagccac-aaaaaacaacaaaatacctaggaatacagccaaccagggaggtgaagaatc-ctacaacaagaattgcaaaacactgctcaaagaaattagagatgacaaaaacaaattgaaacacattttatgttcatgggtagaaagaatcaatattgttaaagtggccatactccctaaaacaatttacagattcaatattacttctatcaaactaccaatgacagccttc-cagcatgat-g-aaaaaaatgttttacaattcatatggaaccaaaaaagagtctaaatggccaaggcaatcataagcaaaaataacaaagctgaagatgtcacattatctgacttcaaactacattacaaggctacaataaccaaaaccacatggtactggtacaaaaacagacacatagaccagtggaacagaatacagaacccagaaataatgttgcacacctacaacatgtggtctttagcaaagctgatgaaaacaggcaatggggaaaaagactccttatttaataaatggtgctga------gataactggctagctatttgcagaaga i manLeu1.NW_012106252v1 C 0 I 6236 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1867311 12313 + 3513951 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1392341.000000 s hg38.chr17_JH159148v1_alt 49042 358 + 88070 ttgaaactggaccccttccttacatggtatacaaaaatcaactcaagatggatcaaaaacttacatgtaaaacctaaggctataaaaacgctggcagacaacctaggcaataccattctaaacataggaccaggcaaggattttatgatgaagtcaccaaaagtaattgtaaaaagagaaaaaattgacaaatgggacctaattaaacttaagagcttctgcacagcaaaagaaactatcaacagagtaaacagacaacctacagaatgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttaa-------------------------acaaatttacaagcaaaaaccaa s panTro5.chr17 16360103 358 + 83181570 ttgaaactggaccccttccttacatggtatacaaaaatcaactcaagatggatcgaagacttacatgtaaaatctaaggctataaaaaccctggcagacaacctaggcaataccattctaaacataggaccaggcaaggattttatgatgaagtcaccaaaagtaattgtaaaaagagaaaaaattgacaaatgggacctaattaaacttaagagcttgtgcacagcaaaagaaactatcaacagagtaaacagacaacctacagaatgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttaa-------------------------acaaatttacaagcaaaaaccaa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16265030 358 + 83442489 ttgaaactggaccccttccttacatgatatacaaaaatcaactcaagatggatcgaagacttacatgtaaaacctaaggctataaaaaccctggcagacaacctaggcaataccattctaaacataggaccaggcaaggattttatgatgaagtcaccaaaagtaattgtaaaaagagaaaaaattgacaaatgggacctaattaaacttaagagcttctgcacagcaaaagaaactatcaacagagtaaacagacaacctacagaatgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttaa-------------------------acaaatttacaagcaaaaaccaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4111985 358 + 4267968 ttgaaactggaccccttccttacatggtatacaaaaatcaactcaagatggatcaaagacttacatgtaaaacctaaggctataaaaaccctggcagacgacctaggcaataccattctaaacataggaccaggcaaggattttatgatgaagtcaccaaaagtaattgtaaaaagagaaaaaattgacaaatgggacctaattaaacttaagagcttctgcacagcaaaagaaactatcaacagagtaaacagacaacctacagaatgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttta-------------------------acaaatttacaagcaaaaaccaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2100141 383 - 2193130 ttgaaactggaccccttccttacatggtatacaaaaatcgcctcaagatggatcaaagacatacatgtaaaacctaaggctataaaaaccctggcagacaacctaggcaataccattctaaacataggaccaggcaaggattttatgatgaagtcaccaaaagtaattgcaaagggagaaaaaattgacaaatgggacctaattaaactaaagagcttctgcacagcaaaagaaactatcaacagagtaaacagacaacctacagaatgggagagaatatttgcaagctatctatccaacaaaggtttaatatccagaatctataaggaagttaatatccagaatctataaggaagttacacaaatttacaagcaaaaaccaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28057124 357 - 80997621 ttgaaactggaccccttccttacatgatatacaaaaatcaactcaagatggatcaaagacatacatgtaaaacctaaggctgtaaaaaccctga-agacaccctaggcaataccattcccaacatagggccaggcaaggattttatgacgaagtcaccaaaagtaattgcaaaaagagaaaaaattggcaaatggaacctaattaaactaaagagcttctgcacagcaaaagaaactatgaacagagtaaacagacaacctacagactgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttaa-------------------------acaaatttacaagcaaaacccaa i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2113636 357 + 10377808 ttgaaactggaccccttccttacatgatatacaaaaatcaactcaagatggatcaaagacatacatgtaaaacctaaggctgtaaaaactctga-agacaccctaggcaataccattcccaacatagggccaggcaaggattttatgacaaagtcaccaaaagtaattgcaaaaagagaaaaaattggcaaatggaacctaattaaactaaagagcttctgcacagcaaaagaaactatgaacagagtaaacagacaacctacagaccgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttaa-------------------------acaaatttacaagcaaaacccaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2005013 357 - 8458610 ttgaaactggaccccttccttacatgacatacaaaaatcaactcaagatggatcaaagacatacatgtaaaacctaaggctgtaaaaaccctga-agacaacctaggcaataccattcccaacataggaccaggcaaggattttatgatgaagtcaccaaaagtagttgcaaaaagagaaaaaattggcaaatggaacctaattaaactaaagagcttctgcacagcaaaagaaactatgaacagagtaaacagacaacctacagactgggagagaatatttgcaagctatctatccaacaaaggtctaatatcaagaatatgtaaggaagttaa-------------------------acaaatttacaagcaaaacccaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64943992 357 + 75148670 ttgaaactggaccccttccttacatgatatacaaaaatcaactcaagatggatcaaagacatacatgtaaaacctagggctgtaaaaaccctga-agacaccctaggcaataccattcccaacatagggccaggcaaggattttatgatgaagtcaccaaaagtaattgcaaaaagagaaaaaattggcaaatggaacctaattaaactaaagagcttctgcacagcaaaagaaactatgaacagagtaaacagacaacctacagactgggagagaatatttgcaagctatctatccaacaaaggtctaatatccagaatctgtaaggaagttaa-------------------------acaaatttacaagcaaaacccaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2196091 357 + 4244037 ttgaaactggaccccttccttacatgatatacaaaaatcaactcaagatggatcaaagacatacatgtaaaacctaaggctgtacaaaccctga-agacaccctagtcaatactattcccaacatagggccaggcaaggattttatgatgaagtcaccaaaagtagttgcaaaaagagaaaaaattggcaaatggaacctaattaaactaaagagcttctgcacagcaaaagaaactatgaacagagtaaacagacaacctacagactgggagagaatatttgcaagctgtctatccaacaaaggtctaatatccagaatatgtaaggaagttaa-------------------------acaaatttacaagcaaaacccaa i manLeu1.NW_012106252v1 I 6236 C 0 e aotNan1.NW_018505111v1 15081 6562 - 94492 T e cebCap1.NW_016107543v1 21145 6286 - 4077172 T e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1867311 12313 + 3513951 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=966596.000000 s hg38.chr17_JH159148v1_alt 49400 180 + 88070 acaatctcattagaaagtggtcaaaggacacgaacagacacttttcaaaagaagacattcaagcggcc-aaaaaggatatgaacaaatgatcaacatcactgatgattagagaaatgcaagttaaaaccacaatgagatgccctctgacacaagtcagaatagctcttattaaagtcaaaa s panTro5.chr17 16360461 180 + 83181570 acaatctcattagaaagtggtcaaaggacattaacagacacttttcaaaagaagacattcaagtggcc-aaaaaggatatgaacaaaggatcaacatcactgatcattagagaaatgcaagttaaaaccacaatgagatgccctctgacacaagtcagaatagctcttgttaaagtcaaaa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16265388 180 + 83442489 acaatctcattagaaagtggtcaaaggacatgaacagacacttttcaaaagaagacattcaagcggac-aaaaaggatatgaacaaaggatcaacatcactaatcattagagaaatgcaagttaaaaccacaatgagatgccctctgacacaagtcagaatagctcttgttaaagtcaaaa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4112343 181 + 4267968 acaatctcgttagaaagtggtcaaaggacatgaacagacacttttcaaaagaagacattcaagcggctaaaaaaggatacgaacaaatgatcaacatcactgatcattagagaaatgcaagttaaaaccacaatgagatgccctctgacacaggtcagaatagctcttattaaagtcaaaa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2100524 180 - 2193130 acaatctcattagaaagtggtcaaaggacatgaacagacccttttcaaaagaagacattcaagcggcc-aaaaaggatatgaacaaatgatcaacatcactgatcattagagaaatgcaagttaaaaccacaatgagatgccctctgacacaagtcagaatagctcttattaaagtcaaaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28057481 179 - 80997621 ataatctcattagaaagtggtcaaaggacatgaacagacacttttcaaaagaagacattcaagcggcc-aaaaagggaatgaacaaatgatcaacgtcactgatcgttagagaaacgcaagttaaaaccacaatgagatactctctgacacaa-tcagaatggctcttattaaagtcaaaa i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2113993 179 + 10377808 ataatctcattagaaagtggtcaaaggacatgaacagacacttttcaaaagaagacattcaagcggcc-aaaaagggaatgaacaaatgatcaacgtcactgatcgttagagaaatgcaagttaaaaccacaatgagataccctctgacacaa-tcagaatggctcttattaaagtcaaaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2005370 179 - 8458610 acaatctcattagaaagtggtcaaaggacatgaacagacacttttcaaaagaagacattcaagcggcc-aaaaagggaatgaacaaatgatcaacgtcactgatcattagagaaatgcaagttaaaaccacaatgagataccctctgacacaa-tcagaatggctcttattaaagtcaaaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64944349 179 + 75148670 ataatctcattagaaagtggtcaaaagacatgaacagacacttttcaaaagaagacattcaagcggcc-aaaaagggaatgaacaaatgatcaacatcgctgatcgttagagaaatgcaagttaaaaccacaatgagataccctctgacacaa-tcagaatggctcttattaaagtcaaaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2196448 179 + 4244037 acaatctcattagaaagtggtcaaaggacatgaacagacacttttcaaaagaagacattcaagcggcc-aaaaagggaatgaacaaatgatcaacgtcattgatcgttagagaaatgcaagttaaaaccacaatgagataccctctgacacaa-tcagaatggctcttattaaagtcaaaa i manLeu1.NW_012106252v1 C 0 C 0 s cebCap1.NW_016107543v1 14859 176 - 4077172 acagtcttattagaaagtggtcaaaggacatgaaca----cttttcaaaagaagacattcaagtggcc-aaaaagcatgtgaacaaataatcaacatcactgatcattagagaaattcatgttaaatccgcaatgagatactttctgacactagtcagaatggctattactaaagtccaaa i cebCap1.NW_016107543v1 T 6286 C 0 s aotNan1.NW_018505111v1 8519 176 - 94492 acaatcttattagaaagtggtcaaaggacatgaaca----cttttcaaaagaagacattcaagtggcc-aaaaagcatatgaacaaataatcaacatcactgatcattagagaaattcatgttaaatccacaatgagataccctctgacacgagtcagaatggctattactaaagtccaaa i aotNan1.NW_018505111v1 T 6562 C 0 e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1867311 12313 + 3513951 I e colAng1.NW_012122154v1 2209638 0 + 4569836 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=1869796.000000 s hg38.chr17_JH159148v1_alt 49580 293 + 88070 aataaaagatgctggcaagtttttgtag--aaaaagaaacacttatacactgttggtggaattgcacattagtttaaccattatggaaagcagttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatta----------ttgggtatatacccaaatgcatataaattgttctaccataaagacacatgcatgcg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaacttaaaatgtacatcaaaagtagactggataaagaaaatgtgtttc s panTro5.chr17 16360641 293 + 83181570 aataaaagatgctggcaagtttttgtag--aaaaagaaacacttatacactgttggtggaattgtacattagtttaaccattatggaaagcagttttgggatctctcaaagaacttagaattaatattcgacccagcaattcaatta----------ttgtgtatatatccaaatgaatataaattgttctaccataaagacacatgcatgtg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaacttaaaatgtacatcaaaagtagactggataaagaaaatgtgtttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16265568 293 + 83442489 aataaaagatgctggcaagtttttgtag--aaaaagaaacacttatacactgttggtggaattgtacattagtttaaccattatggaaagcagttttgggatctctcaaagaacttagaattaatattcgacccagcaattcaatta----------ttgtgtatatatccaaatgaatataaattgttctaccataaagacacatgcatgtg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaacttaaaatgtacatcaaaagtagactggataaagaaaatgtgtttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4112524 293 + 4267968 aataaaagatgctggcaagtttttgtag--aaaaaggaacacttatacactgttggtggaattgtacattagtttaaccattatggaaagcagttttgggatctctcaaagaacttagaattaatattcgacccagcaattcaatta----------ttgggtatatacccaaatgaatataaattgttctaccataaagacacatgcatgca-tatgttcattgcagcactactcacaatagcaaagacatagagtcaacttaaaatgtacatcaaaagtagactggataaagaaaatgtgtttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2100704 293 - 2193130 aataaaagatactggcaagtttttgtag--aaaaaggaacacttatacactgttggtggaattgtacattagtttaaccattatggaaagcagttttgggatatctcaaagaacttagaattaatatgtggcccagcaattcaatta----------ttgggtatacacccaaatgaatataaattgttcttccataaagacacatgcatgcgttatgttcattgcagcactactcacaatagcaaagacatagagtcaac-taaaatgtacgtcaaaagtagactggataaagaaaatgtgttac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28057660 292 - 80997621 aataaaagatgatggcaaggttttgtag--aaaaaggaacacttacacaatgttggtggaattgtacattagtttaaccattgtggaaagcagttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatca----------ctgggtatatatcgaaatgaatataaattgtcctaccataaagacacatgcatgcg-tatgttcattgcagcactactcacaatagaaaagacatagagtcaac-taaaatgtgcatcaaaagtagattggataaagaaaatgtgctac i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2114172 291 + 10377808 aataaaagatgatggcaaggttttgtag--aaaaaggaacacttacacaatgttggtggaattgtacattagtttaaccattgtggaaagcagttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatca----------ctgggtatatatcgaaatgaatataaattgtcctaccataaagacacatgcatgcg-tatgttcattgcagcactactcacaatagaaaagacatagagtcaac-taaaatgtgcatc-aaagtagattggataaagaaaatgtgctac i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2005549 292 - 8458610 aataaaagatgatggcaaggttttgtag--aaaaaggaacgcttacacaatgttggtggaattgtacattagtttaaccattgtggaaagcagttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatca----------ctgggtatatatccaaatgaatataaattgtcctaccataaagacacatgcatgcg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaac-taaaatgtgcatcaaaagtagattggataaagaaaatgtgctac i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64944528 292 + 75148670 aataaaagatgatggcaaggttttgtag--aaaaaggaacatttacacaatggtggtggaattgtacattagtttaactatagtggaaagcagttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatca----------ctgggtatatatccaaatgaatataaattgtcctaccataaagacacatgcatgtg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaac-taaaatgtgcatcaaaagtagattggataaagaaaatgtgctac i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2196627 302 + 4244037 aataaaagatgatggcaagattttgtag--aaaaaggaacacttacacaatgttggtggaattgtacattagtttaaccattgtggaaagcggttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatcactgggtatatctgggtatatatccaaatgaatataaattgtcctaccataaagacacatgcatgcg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaac-taaaatatgcatcaaaagtagattggataaagaaaatgtgctac i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2209638 292 + 4569836 aataaaagatgatggcaaggttttttag--aaaaaggaacacttacacaatgttggtggaattgtacattagtttaaccattgtggaaagcacttttgggatctctcaaagaacttagaattaatatttgacccagcaattcaatca----------ttggttatatatccaaatgaatataaattgtcctaccataaagacacatgcatgcg-tatgttcattgcagcactactcacaatagcaaagacatagagtcaac-taaaatgtgcatcaaaagtagattggataaagaaaatgtgctac i colAng1.NW_012122154v1 C 0 C 0 s cebCap1.NW_016107543v1 15035 294 - 4077172 aataaaagatgctgccaatgttttgtagaaaaaaaaaaacacttatacactgttggtgagactgcacattagtttaaccattgtggaaagcagttttgggatctctcaaagaacttacaattattatttgacccagcaatccaatta----------ttgggtaaatacccaaaggaatataaattgctctaccataaagacatatgcatgcc-tatgtccattgcagcgctactgacaatagcaaagacatggaatcaac-taaaatgtgcatcaaaagtagactggataaagaaaatgtgttac i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 8695 293 - 94492 aataaaagatgctgccaacgttttgtag-gaaaaaaaatcacttacacagtgttggtgagactgcacattagtttaaccattgtggaaagcagttttgggatctctcaaagaacttacaattattatttggcccaacaatccaatta----------ttggatatatacccaaaggaatataaattgttctaccataaagatatatgcatgca-tatgtccattgaagcactactcacaatagcaaagatatagaatcaac-taaaatttgcatcaaaagtagactggataaagaaaatgtgttac i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e saiBol1.JH378271 1867311 12313 + 3513951 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=1480130.000000 s hg38.chr17_JH159148v1_alt 49873 209 + 88070 atatacaccatggaatactatacag----aaaaaaaaggaaaaaaagaacaagatgatgtcctttgcagcaacacagatggagccggaggccattatcccaagggaactaacacaggaacagaaaaccaaataacacatgttctcacataagagtgggggccaaacattgaatacatatgaacacaaagaagggaacaacagacactggaact s panTro5.chr17 16360934 209 + 83181570 atatacaccatggaatactatacag----aaaaaaaaggaaaaaaagaacaagatgatgtcctttgcagcaacgcagatggagccggaggccattatcccaagggaactaacacaggaacagaaaaccaaataccacatgttctcacataagagtgggggccaaacattgaatacatatgaacacaaacaagggaacaacagacactggaact i panTro5.chr17 C 0 C 0 s panPan2.chr17 16265861 207 + 83442489 atatacaccatggaatactatacag----aaaaaaa--ggaaaaaagaacaagatgatgtcctttgcagcaacgcagatggagccggaggccattatcccaagggaactaacacaggaacagaaaaccaaataccacatgttctcacataagactgggggccaaacattgaatacatatgaacacaaagaagggaacaacagacactggaact i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4112817 209 + 4267968 atatacaccatggaatactatacag----aaaaaaaaggaaaaaaagaacaaaatgatgtcctttgcagcagcacagatggagccggaggccattatcccaagggaactaacacaggaacagaaaaccaaataccacatgttctcacataagagtgggggccaaacattgaatacatatgaacacaaagaagggaacaacagacactggaact i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2100997 208 - 2193130 atatacaccatagaacactatacag----aaaaaaa-ggaaaaaatgaacaaggtgatgtcctttgcagcaacacagatggagctggaggccattatcccaagggaactgacacaggaacagaaaaccaaataccacatgttctcacataagagtgggggccaaacatcgaatacatatgaacacaaagaagggaacaacagacactggaact i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28057952 213 - 80997621 atatacaccataaaatactatacagaaaaaaaaaaaaaagaaaaaagaacaagatgatgtcctttgcagcaacacggatggagctggaggccattatcccaagggaactaacccaggaacagaaaaccaaataccacatgtcctcacttaagagtgggagccaaacattgaatgcatatgaacacaaagacaggaacaacagacactggaact i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2114463 213 + 10377808 atatacaccataaaatactatacagaaaaaaaaaaaaaagaaaaaagaacaagatgatgtcctttgcagcaacacggatggagctggaggccattatcccaagggaactaacccaggaacagaaaaccaaataccacatgttctcacataagagtgggagccaaacattgaatgcatatgaacacaaagacaggaacaacagacactggaact i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2005841 211 - 8458610 atatacaccataaaatactatacag--aaaaaaaaaaaagaaaaaagaacaagatgatgtcctttgcaacaacacggatggagctggaggccattatcccaagggaactaacccaggaacagaaaaccaaataccacatgttctcacataagagtgggagccaaacattgaatgcatatgcacacaaagacaggaacaacagatactggaact i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64944820 204 + 75148670 atatacaccataaaatactatacag-aaaaaaaaaaaaagaaaaaagaacaagatgatgtc--------caacacagatggagctggaggccattatcccaagggaactaacccaggaacagaaaaccaaataccacatgttctcacataagagtaggagccaaacattgaatgcatatgaacacaaagacaggaacaacagacactggaact i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2196929 208 + 4244037 atatacaccataaaatactatacag-----aaaaaaaaagaaaaaagaacaagatgatgtcctttgcagcaacacagatggagctggaggccattatcccaagggaactaacccaggaacagaaaaccaaataccacatgttctcacataagagtgggagccaaacattgaatgcatatgcacacaaagacaggaacaacagacactggaact i manLeu1.NW_012106252v1 C 0 T 6212 s colAng1.NW_012122154v1 2209930 210 + 4569836 atatacaccataaaatgctatacag---aaaaagaaaaagaaaaaagaacaagatgatgtcctttgcagaaacacagatggagctggaggccattatcccaagggaactaacccaggaacagaaaaccaaataccacatgttctcacgtaagagtgggagccagacattgaatacatatgaacacaaagacaggagcaacagacactggaact i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1879624 203 + 3513951 atatacccaaaggaatgctatacag----------acattaaaaaagaatgagatcgtatcctttgcagcaacacagatggagctggaggccattatcccaagggaactaacacaggaatataaaaccaaaaaccacatgttctcacttaacagtgggagccaaacattgaatgcatatgaacacaaagaggggaaaaacagacactgggact i saiBol1.JH378271 I 12313 C 0 s cebCap1.NW_016107543v1 15329 201 - 4077172 atatacagcatagaatactatacag----------acattaaaaaagaacaagatcatgtcctttgcagcaacacagttggagctggaggccgttatcccaagggaactaacacaggaacataaaaccaaaaaccacatgttctcacttg--agtgggagccaaacattgaatacatatgaacacaaagaggggaacaacagacactgggact i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 8988 203 - 94492 atatacagcatagaatactatacag----------acattaaaaaagaacgagatcacgtcctttgcagcaacacagatggagctggaggcctttatcccaagggaactaacacaggaacataaaaccaaaaaccacatgttctcacttaagcgtgggagccaaacattgaatacatatgaacataaagaggggaacaacagacactgggact i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=313647.000000 s hg38.chr17_JH159148v1_alt 50082 46 + 88070 tacctgtgggtggactgtgggaggagaatgagaatcaaaaaactgc s panTro5.chr17 16361143 46 + 83181570 tacctgtgggtggactgtgggaggagaatgagaatcaaaaaactgc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266068 46 + 83442489 tacctgtgggtggactgtgggaggagaatgagaatcaaaaaactgc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113026 45 + 4267968 tacctgtgggtggactgtgggaggagaatgagaat-aaaaaactgc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2101205 45 - 2193130 tacctgtgggtggactgtgggaggagaatgaggat-caaaaactgc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28058165 46 - 80997621 tacctgtgggtgaagtgtgggaggaggacgaggatcaaaaaactgc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2114676 46 + 10377808 tacctgtgggtgaagtgtgggaggaggacgaggatcaaaaaactgc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006052 46 - 8458610 tacctgtgggtgaagtgtgggaggaggacgaggatcaagaaactgc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945024 46 + 75148670 tacctgtgggggaagtgtgggaggaggacgaggatcaaaaaactgc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2190925 46 + 4244037 tacctgtgggtgaagtgtgggaggaggacgaggatcaaaaaactgc i manLeu1.NW_012106252v1 T 6212 C 0 s colAng1.NW_012122154v1 2210140 46 + 4569836 tacctgtgggtgaagtgtgggaggaggatgaggatcaaaaaactgc i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1879827 46 + 3513951 tatttgtggctggagggtgggaggagaatgagaatcaaaaaactgg i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 15530 46 - 4077172 tatttgtgggtggagggtgggaggagaatgagaatcaaaaaactgg i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9191 46 - 94492 tatttgtgggtggagagtgggaggaaactgggaatcaaaaaactgg i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=1059319.000000 s hg38.chr17_JH159148v1_alt 50128 127 + 88070 ctatcaggtattatgcttattacctgggtgaagaactaatctgtacaccaaaccctgcaacacacaatttaactataaaataacccggcacacgtacccctgaaccttaaaaaaaggttaaaaaaTT s panTro5.chr17 16361189 127 + 83181570 ctatcaggtattatgcttattacctgggtgaaaaactattctgtacaccaaaccctgcaacacacaatttaactataaaataaaccggcacacgtacccctgaaccttaaaaaaaggttaaaaaaTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266114 127 + 83442489 ctatcaggtattatgcttattacctgggtgaaaaactattctgtacaccaaaccctgccacacacaatttaactataaaatacaccggcacacgtacccctgaaccttaaaaaaaggttaaaaaaTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113071 127 + 4267968 ctatcaggtactatgcttattacctgggtgaaaaactaatctgtacaccaaaccctgcaacacacaatttaactataaaataaactggcacacgtacccctgaaccttaaaaaaaggttaaaaaaTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2101250 126 - 2193130 ctatcaggtgttatgcttcttacctgggtgaaaaaccaatctgtacaccaaaccctgcaacacacaatttaactataaaataaaccagcacacgtacccctggaccttaaaaaaa-gttaaaaaaTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28058211 127 - 80997621 ctctctggtattatgcttattatctgggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactatgaaataaactggcacacatacccctgaaccttaaaaaaatgctaaaaaaTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2114722 127 + 10377808 ctctctggtattatgcttattatctgggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactatgaaataaactggcacacatacccctgaaccttaaaaaaatgctaaaaaaTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006098 127 - 8458610 ctctctggtattatgcttattatctgggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactataaaataaactggcacacgtacccctgaaccttaaaaaaatgttaaaaaaTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945070 127 + 75148670 ctctctggtattatgcttattatctgggtgacgaaatcatctgtacaccaaaccctgcaacgcacaatttaactataaaataaaccggcgcacgtacccctgaaccttaaaaaaatgttaaaaCATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2190971 127 + 4244037 ctctctggtattatgcttattatctgggtgacaaaataatctgtaccccaaaccctgcaacacacaatttaactataaaataaactggcacacgtacccctgaaccttacaaaaatgttaaaaaaTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2210186 126 + 4569836 ctctctggtattatgcttattatctgggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactacaaaataaactagcacacgtacccctgaaccttaaaaaaa-gttaaaaaaTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 712 126 - 12755 ctcttgggtattatgcttattatctaggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactataaaataaacctgcacacatacccctgaaccttaaaaaga-gttaaaaaTTT i calJac3.chr5_ACFV01180105_random N 0 C 0 s saiBol1.JH378271 1879873 126 + 3513951 ttcttgggtattatgcttattatctaggtgacaaagtaatctgtacaccaaaccctgcaacacacaatttaactataaaataaacctgcacacatacccctgaaccttaaaaaaa-gttaaaaaTTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 15576 126 - 4077172 ctcttgggtattatgcttattatctaggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactataaaataaacctgcacacatacccctgaaccttaaaaaaa-gttaaaaaTTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9237 126 - 94492 ctcttgggtattatgcttattatctaggtgacaaaataatctgtacaccaaaccctgcaacacacaatttaactataaaataaacctgcacgcacacccctgaaccttaaaaaaa-gttaaacaaTT i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39589624 2106 - 61074082 T e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=20354.000000 s hg38.chr17_JH159148v1_alt 50255 4 + 88070 TCTT s panTro5.chr17 16361316 4 + 83181570 TCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266241 4 + 83442489 TCTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113198 4 + 4267968 TCTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2101376 4 - 2193130 TCTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28058338 4 - 80997621 TATC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2114849 4 + 10377808 TATC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006225 4 - 8458610 TATC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945197 4 + 75148670 TATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191098 4 + 4244037 TATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2210312 4 + 4569836 TATT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 838 3 - 12755 -CTT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1879999 4 + 3513951 ACTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 15702 4 - 4077172 TCTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9363 4 - 94492 TCTT i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520514 4 + 61074082 TCTT i canFam3.chr9 I 120 C 0 e dasNov3.JH570468 560186 34 - 852752 I e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=1518199.000000 s hg38.chr17_JH159148v1_alt 50259 176 + 88070 TGATGCACGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCTGCATTCATGACAGCTGCTAAATGCAGACCCTGCTGCTGTATCATGTAGCTGTTGCTCACTGACGGCTGGGCAATTAATTTGGGAAGACTTTTGTGAACTGAAATGTTATCTCTTGCCAAATAC-TAGA s panTro5.chr17 16361320 176 + 83181570 TGATGCACGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCTGCATTCATGACAGCTGCTAAATGCAGACCCTGCTGCTGTATCATGTAGCTGTTGCTCACTGACGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACTGAAATGTTATCTCTTGCCAAATAC-TAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266245 176 + 83442489 TGATGCACGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCTGCATTCATGACAGCTGCTAAATGCAGACCCTGCTGCTGTATCATGTAGCTGTTGCTCACTGACGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACTGAAATGTTATCTCTTGCCAAATAC-TAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113202 176 + 4267968 TGATGCACGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCTGCATTCATGACAGCTGCTAAATGAAGACCCTGCCGCTGTATCATGTAGCTGTTGCTCACTGATGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACTGAAATGTTATCTCTTGCCAAATAC-TAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2101380 176 - 2193130 TGATGCACGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCTGCATTCATGACAGCTGCTAAATGCAGACCCTGCTGCTGTATCATGTAGCTGTTGCTCACTGACTGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACCCAAATGTTATCTCTTGCCAAATAC-TAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28058342 176 - 80997621 TGATGCAGGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCCACATTCAGGACAGCTGCTAAATGCAGCCCTTGCTGCTGTACCATGTAGCTGTTGCTCACTGATGCGTGGGCAATTAATTTGGGAAGACTTTTGTGAACGAAAATGTTATCTCTTGCCAAACAC-TAGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2114853 176 + 10377808 TGATGCAGGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCCACATTCAGGACAGCTGCTAAATGCAGCCCTTGCTGCTGTACCATGTAGCTGTTGCTCACTGATGCGTGGGCAATTAATTTGGGAAGACTTTTGTGAACGAAAATGTTATCTCTTGCCAAACAC-TAGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006229 176 - 8458610 TGATGCAGGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCCACATTCAGGACAGCTGTTAAATGCAGCCCTTGCTGCTGTACCATGTAGCTGTTGCTCACTGATGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACCAAAATGTTATCTCTTGCCAAACAC-TAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945201 176 + 75148670 TGATGCAGGTGAATTGAACGATTGGCTGGTATAGGCC---------AATAGGA----TCCCCACATTCAGGACAGCTGCTAAATGCAGCCCTTGCTGCTGTACCATGTAGCTGTGGCTCACTGATGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACCAAAATATTACCTCTTGCCAAACAC-TAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191102 170 + 4244037 TGATGCAGGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCCACATTCAGGACAGCTGCTAAATGCAGCCCTTGCTGCTGTACCA------TGTTGCTCACTGATGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACCAAAATGTTATCTCTTGCCAAACAC-TGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2210316 176 + 4569836 TGATGCAGGTGAATTGAATGATTGGCTGGTATAGGCC---------AATAGGA----TCCCTGCATTCAGGACAGCTGCTAAATGCAGCCCTTGCTGCTGTACCATGTAGCTGTTGCTCACTGATGGGTGGGCAATTAATTTGGGAAGACTTTTGTGAACCGAAATGTTATCTCTTGCCAAACAC-TAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 841 183 - 12755 TAATGCAGGTGAATTGAATGATTGGCTGGTATAGGCT-GAGACAA-AATAAAA----TCCCTGCATTCAGGGCAGCTGCTAAATGCAGCCCCTACTGCTGTACCATGTAGCTGTTCCTCATTGACCTGTGGGAAACTGATTTGGGAAGACCTTTGTGAACTGAAATGTTGTCTCTTGCCAAATAT-TAGA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1880003 183 + 3513951 TAATGCAGGTGAATTGAACGATTGGCTGGTATAGGCT-GAGACAA-AGTAGAA----TCCTTGCATTCAGGGCAGCTGCTAAATGCAGCCCCTGCTGCTGTACCATGTAGCTGTTCCTCATTGACCTGTGGGAAACTAATTTGGGAAGACCTTTGTGAACCAAAATGTTGTCTCTTGCCAAATAC-TAGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 15706 183 - 4077172 TAATGCAGGCAAATTGAATGATTGGCTGGTATTGGCT-GAGACAA-AATAGAA----TCCTTGCATTCAGGGCAGCTGCTAAATGCAGCCCCTGCTGCTGTACCATGTAGCTGTTCCTCATTGACCTGTGGGAAACTAATTTGGGAAGACCTTTGTGAACCAAAATGTTGTCTCTTGCCAAATAC-TAGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9367 183 - 94492 TAATGCAGGTGAATTGAATGATTGGCTGGTATAGACT-GAGACAA-AATAGAA----TCCCTGCATTCAGGGCAGCTGCTAAATGCAGCCCCTGCTGCTGTACCGTGTAGCTGTTCCTCATTGACCTGTGGGAAACTAATTTGGGAAGACCTTTGTGAACTGAAATATTGTCTCTTGCCAAATAC-TACA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520518 171 + 61074082 TGATGC-GGAGGGGTGCATGAGGGACTGGATGGGGCCCAAGGCAACCAAAGGG----CTCCTGTGCACAGGAACTCTAC--AAGGAAGGGCCCACTGCCCTCACACAGGGATTCTGGTCACTGAGGTGTAGGACACAA---TGTCTACAACTTTGT---CCCAGATGTTCC------CCACATATGTAGG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 560220 178 - 852752 TGATGCCAGTGAATGGCATCAGTGCATGGAAAGAGCCTGAGA----CAAAGGATGTCTCCCTGTGCT-ACGGAATTTCTTACACATAGCCATTGATACCTT-TCATGTCATTCATACTCACTGAGTTGTGGGAAACTGATTTGGAAAGAGCTTTGTACATGGAAACATTAACTGATATCTAACA------ i dasNov3.JH570468 I 34 C 0 e otoGar3.GL873537 22862056 5332 + 28711273 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=1519474.000000 s hg38.chr17_JH159148v1_alt 50435 169 + 88070 GATTA--TTATTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAATC-C-CAATGTCATTACTACTT--TATTGAGAGTTAAATGTAAGTGTCTTTGGACAGAAAGAGAAGACGCAACCTTGCATCAGAGTCTGTCCACTATTAGCTACATAACATCACACATT s panTro5.chr17 16361496 169 + 83181570 GATTA--TTATTTCCATTGTTAAAT--AA---ACTCAAGTGCATGACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAAATGTAAGTGTCTTTGGGCAGAAAGAGAAGACGCAACCTTGCATCAGAGTCTGTCCACTATTAGCTACATAACATCACACATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266421 169 + 83442489 GATTA--TTATTTCCATTGTTAAAT--AA---ACTCAAGTGCATGACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAAATGTAAGTGTCTTTGGGCAGAAAGAGAAGACGCAACCTTGCATCAGAGTCTGTCCACTATTAGCTACATAACATCACACATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113378 168 + 4267968 GATTA--TTATTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAAATGT-AGTGTCTTTGGACAGAAAGAGAAGACGCAACCTTGCATCAGAGTCTGTCCACTATTAGCTACATAACATCACACATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2101556 169 - 2193130 GATTA--TTCTTTCCACTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTAAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTTAATGTAAGTGTCTTTGGACAGAAAGAGAAGACGCAACCTTGCATCAGAGTCTGTCCACTATTAGCTACATAACGTCACACATT i nomLeu3.chrUn_GL397460_1 C 0 I 239 s macFas5.chr16 28058518 169 - 80997621 GATTA--TTCTTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAATCTTGCATCAGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115029 169 + 10377808 GATTA--TTCTTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAATCTTGCATCAGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006405 169 - 8458610 GATTA--TTCTTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAATCTTGCATCAGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945377 169 + 75148670 GATTA--TTCTTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGATGCAGTCTTGCATCAGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191272 169 + 4244037 GATTA--TTCTTTCCATTGCTAAAT--AA---ACTCAAGTGTGTAACTTGCTAGTGCTGAGTC-C-CAATGTCATTTCTACTT--TATTGAGAGTTAATTGTAAGTGTCTTTGGGCAGAAAGAGAAAATGCAATCTTGCATCAGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2210492 169 + 4569836 GATTA--TTCTTTCCATTGTTAAAT--AA---ACTCAAGTGCATAACTTGCTAGTGCTGAGTC-C-CAATGTCGTTTCTACTT--TATTGAGAGTTAATTGTAAGTGTCTTTGGACAGAAAGAGAAGAAGCAATCTTGCATCAGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1024 160 - 12755 GGTTG-TTTTTTTCCCTTGTGAGGT--AA---ACTCAAGTGGCTAACTTGCTACTGC-----------AAGTCCTTTCTACTT--TATTGAGAGTTAAATGTAAGTG-CTTTGGACAGAAAGAAAAGACGCAACCTTGGTTCCAAGTCTGTCCACTATTAGCTACGTAACATCACACATT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1880186 169 + 3513951 GGTCG-TTTTTTTCCCTTGTGAGGT--AA---ACTCAAGTGCCTAACTTGCTAGTGCTGGGTT-C-CAATGTCATTCCTACTT--TATTGAGAGTTAAATGTAAGGG-CTTTGGACAGAAAGAGAAGACGCAACCTTGGTTCTGAGTCTGTCCACTGTTAGCTACATAACATCACACATT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 15889 169 - 4077172 GGTTG-TTTTTTTCCCTT-TGAGGT--AA---ACTCAAGTGCCTAACTTGCTAGTGCTGAGTT-C-CAGTGTCATTTCTACTT--TATTGAGAGTTAAATGTAAGTGTCTTTGGACAGAAAGAGAAGACGCAAACTTGGTTCCGAGTCTGTCCACTATTAGCTACATAACATCACACATT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9550 170 - 94492 GGTTGTTTTTTTTCCCTTGTGAGGT--AA---ACTCAAGTGCCTAACTTGCTAGTGCTGAGTT-C-CACTGTCATTTCTACTT--TATTGAGAGTTAAATGTAAGTG-CTTTGGACAGAAAGAGAAGATGCAACCTTGGTTCCGATTCTGTCCACTATTAGCTACATAACATCACACATT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867388 165 + 28711273 gattt--ttgttgttgttgTT-----------GCTCAAGTGCACAGCTCACCAGTTCTCATTCTC-CAGTAGCAGTTCTAGTT-GCTTTGAGATGGACATGCAGGTGCCCTTGAGCAGACACCGCAGACCCAGTCCTGGATGTCAGTGTGACTATTATTCACTACAAGACATTATGCTAT i otoGar3.GL873537 I 5332 C 0 s canFam3.chr9 21520689 173 + 61074082 GGAGA--CCAGTTCCATGGTCAATG--AAGACACTCAACTGAATAGCTTGCTGGAGCTCAGGG-C-CAGGGTGTTTCCTAACTGGTCTGCAGATGGGAATGTGAGCGCCCTTCAGCCAGGGCAGGAGATACAGCCTGGCATCTGATTCTGCCC-CTGTCAGCTCTGTGACATGATGTCAT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 560398 172 - 852752 -GTTA--TTATTTCTTTGCCAAAATGGAA---TTTAAAAAATCTATCTTACTAGAGCTCGGTC-TGTAGCACCATTTCTCATT-GCCTTGAGATGCAAGTGTAAGAGACCTCCACCAGAAACGGAAGACCCAGTTCTTGATCTAAGTTGGTGCATTTCTACATACATGACTTTACACAAG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=1435973.000000 s hg38.chr17_JH159148v1_alt 50604 163 + 88070 AAAACtttcccagttg--gaaaatggaggcaataatacatgactgtctgttttgagaatcaaattgggtaatacatatGGTATGTG--ATATATGTGTAAATC-CC-ATATCAGGAATGTT-TTCAAATAAAACA-AATCACCATATGGTATGAATAATAGTTCCAAATTT s panTro5.chr17 16361665 163 + 83181570 AAaattttcccagttg--gaaaatggaggcaataatacatgactgtctgttttgagaatcaaattgggtaatacatatGGTATGTG--ATATATGTGTAAATC-CC-ATATCAGGAATGTT-TTCAAATAAAGCA-AATCACCATATGGGATGAATGATAGTTCCAAATTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266590 163 + 83442489 AAaattttcccagttg--gaaaatggaggcaataatacatgactgtctgttttgagaatcaaattgggtaatacatatGGTATGTG--ATATATGTGTAAATC-CC-ATATCAGGAATGTT-TTCAAATAAAGCA-AATCACCATATGGGATGAATGATAGTTCCAAATTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113546 163 + 4267968 AAaattttcccatttg--gaaaatggaggcaataatacatgactgtctgttttgagaatcaaattgggtaatacatatgGTATGTG--ATATATGTGTAAATC-CC-ATATCAGGAATGTT-TTCAAATAAAACA-AATCACCATATGGGATGAATAATAGTTCCAAATTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2101964 163 - 2193130 aaaAttttcccagttg--gaaaatggaggcaataatacatgactgtctgttttgagaatcaaattgggtaatacatatagtatgtg--agagATGTGTAAATC-CC-GTATCAGGAACGTT-TTCAAATAAAACA-AATCACCATATGGGATGAATAATCGTTCCAAATTT i nomLeu3.chrUn_GL397460_1 I 239 C 0 s macFas5.chr16 28058687 163 - 80997621 AAaattttcccagttg--gaaaatggaggcaataatacactactgtctgttttgagaatcaaattaggtaatacatACAGTAGGTG--ATATATGCGTAAATC-CC-ATATCAGGAATGCT-TTCAAATAAAACA-AAGCACCATATGTGATGAAGAATGGTTCCGAATTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115198 163 + 10377808 AAAATTTTCCCAGTTG--GAAAATGGAGGCAATAATACACTACTGTCTGTTTTGAGAATCAAATTGGGTAATACATACAGTAGGTG--ATATATGCGTAAATC-CC-ATATCAGGAATGCT-TTCAAATAAAACA-AAGCACCATATGTGATGAAGAATGGTTCCGAATTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006574 163 - 8458610 AAaattttcccagttg--gaaaatggaggcaataatacactactgtctgttttgagaatcaaattgggtaatacatataGTAGGTG--ATACATGCATGAATC-CC-ATATCAGGAATGCT-TTCAAATAACACA-AAGCACCATATGTGATGAAGAATGGTTCTGAATTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945546 163 + 75148670 AAaattttcccagttg--gaaaatggaggcaataatacactactgtccgttttgagaatcaaattgggtaatacatataGTAGGTG--ATACATGCGTAAATC-CC-ATATCAGGAATGCT-TTCAAATAAAACA-AAGCACCATATGTGATGAAGAATGGTTCCGAATTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191441 163 + 4244037 AAaattttcccagttg--gaaaatggaggcaataatacactactgtctgttttgagaatcaaattgggtaatatatataGTAGGTG--ATACATGCGTGAATC-CC-ATATCAGGAATGCT-TTCAAATAAAACA-AAGCACCATATGTGATGAAGAATGGTTCTGAATTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2210661 163 + 4569836 AAaatttttccagttg--gaaaatggaggcaataatacactactgtctgttttgagaatcaaattgggtaatacGCACAGTAGGTG--ATATATGTGTAAATC-CC-ATATTAGGAATGCT-TTCAAATAAAACA-AAGCACCATACGGGATGAAGAATGGTTCCAAATTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1184 163 - 12755 AAATTTTTCGCAGTTG--GAAAATGGAGGCAATACAACATGACTGTCTATTTTGAGAATCAAATTGGGTAATACATATAGTGTGTG--ATGTGTGTGTAAATC-CC-ATATCAGGAATGCT-TTGAAAGAATCCA-AGACACCATATGAGATGAAGAATGGTTCTGAATTC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1880355 163 + 3513951 AAAATTTTCGCAGTTG--GAAGATGGAGGCAATAAAACATGACTGTCTATTTTGAGAATCAAATTGGGTAATACATATAGTGTGTG--ATGTGTGTGTAAACT-CC-GTGTCAGGAATGCT-TTAAAATAATACA-AGACACCATATGAGATGAAGAATGGTTCTGAATTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16058 159 - 4077172 AAAATGTTCACAGTTG--GAAAATGGAGGCAATAAAACATGA----CTATTTTGAGAATCAAATTGGGTAACACATATAGTGTGTG--ATGTGTGTATAAATC-CC-ATGTCAGGAATGCT-TTAAAATAATACA-AGACACCATATGAGACAAAGAATGGTTCTGAATTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9720 163 - 94492 AAaattttcacagttg--gaaaatggaggcaataaaacatgactgtttattttgagaatcaaattgggtaatacatataGTGTGAG--ATGTGTGTGTAAATC-CC-ATATCAGGAATGCT-TAAAAATAATACA-AGACACCATATGAGATGAAGAATGGTTCCGAATTT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867553 165 + 28711273 GAAGTTTTCTCATCTGAAAAAAATGATATTAACAATACAAGGGTAACTGTATTGAAAAGAAAAATGGATAATATATATGGCATGCC--ATACGTATACAAGTTGCT-GTATCAGAAAGAAG-TAC-AATGGAACA-AAACACAACACGAGATGAATAAAGGCTCACAATTT i otoGar3.GL873537 C 0 I 7279 s canFam3.chr9 21520862 160 + 61074082 GGGATTTTATCATCT---CCAAGTGGAGATACAAATTTGTGGGGGATTATA-GGAGGCTCTAAATGGATAATGCACGTGGTATGGA--ACTTGTGTATACATCGTG-ATGTTGTGAGCACT----GAAGAAGACATGGACACCATATGGGATGCAGAATGATACACGGTTT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 560570 157 - 852752 TGAATATTCA-AATCA--GAAGGGAGAGGCACTATTTACTGGATGGTTTTTATG--------GTCAGAGAATTCATAAAGTATGGGGTATGCGTATATAAATC-CCTATATCAGAAAGGCCATACAACAAAAGTG-AAACATGATATG-GATGACTGATAAGGATGAATGG i dasNov3.JH570468 C 0 I 6 e rheMac8.chr16 30139106 31425 - 77216781 I a score=3876245.000000 s hg38.chr17_JH159148v1_alt 50767 432 + 88070 ATTTATT-------------------------------------AAGAAATA---TATATGTAAG-ATCCCTGGT-TATAGGGAGATAACCC---AAAGTGATCATTAAAAGAAGGAAGCAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGC---------------------AA------------------------------CTTAAGTTT-C---TTAAGTGA-----AGAGAATGAAGCTCTTGACTTT---TGAGTCAAAGCTGAGACCATGACTCAAAATTGAGAACACATGA-----------------AGCTGGCACATGATTCACAAGGTATAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAATATGCAGAGAATTCATAAAAATTTGGGTGAGAACATGGTTGCTGTCAGCAGT-----AAGGTAAATTAGTCCTCCAAAAGATAAGTCAGTTGAGCAGAAGGTTGTTGTGTGAAGATGG--TTGT s panTro5.chr17 16361828 432 + 83181570 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATCCCTGGT-TATAGGGAGATAACCC---AAAGTGATCATTAAAAGAAGGAAGCAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGC---------------------AA------------------------------CTTAAGTTT-C---TTAAGTGA-----AGAGAATGAAGCTCTTGACTTT---TGAGTCAAAGCTGAGACCATGACTCAAAATTGAGAACACATGA-----------------AGCTGGCACATGATTCACAAGGTATAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACATGCAGAGAATTCATAAAAATTTGGGTGAGAACATGGTTGCTGTCAGCAGT-----AAGGTAAATTAGTCCTCCAAAAGGTAAGTCAGTTGAGCAGAAGGTTGTTGTGTGAAGATGG--TGGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16266753 432 + 83442489 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATCCCTGGT-TATAGGGAGATAACCC---AAAGTGATCATTAAAAGAAGGAAGCAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGC---------------------AA------------------------------CTTAAGTTT-C---TTAAGTGA-----AGAGAATGAAGCTCTTGACTTT---TGAGTCAAAGCTGAGACCATGACTCAAAATTGAGAACACATGA-----------------AGCTGGCACATGATTCACAAGGTATAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACATGCAGAGAATTCATAAAAATTTGGGTGAGAACATGGTTGCTGTCAGCAGT-----AAGGTAAATTAGTCCTCCAAAAGGTAAGTCAGTTGAGCAGAAGGTTGTTGTGTGAAGATGG--TGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4113709 432 + 4267968 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATCCCTGGT-TATAGGGAGATAACCC---AAAGTAATCATTAAAAGAAGGAAGCAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGCGAATA--------------------TTCTTAATCATTTGAAGC---------------------AA------------------------------CTTAAGTTT-C---TTAAGTGA-----AAAGAATGAAGCTCTTGACTTT---TGAGTCAAAGCTGAGACCATGACTCAAAATTGAGAACACATGA-----------------AGCTGGCACATGATTCACAAGGTATAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAGACATGCAGAGAATTCATAAAAATTTGGGTGAGAACATGGTGGCTGTCAGCAGT-----AAGGTAAATTAGTCCTCCAAAAGATAAGTCAGTTGAGCAGAAGGTTGTTGTGTGAAGATGG--TGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102127 469 - 2193130 ATTTATTAAGCGAGATTCTGTCTCaaaaaaataaaaaataaaaaaagaaata---tataagtaaG-ATCCCTGGT-TATAGGGAGATAACCC---AGAGTGATAGTTAAAAGAAGGAAGGAGTATACAAGATTCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAAGTGA-----AGAGAATGAAGCTCTTGACTTT---TGAGTCAAAGCTGAGACCATGACTCAAAATTGAGAACACATGA-----------------AGCTGGCACATGATCCACAAGGTATAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCCTCCCTCAAGCTGATTCACAAGATTTTAAACATGCAGAGAATTCATTAAAATTTGGGTGAGAGCATGGTGGCTGTCAGCAGT-----AAGGTAAATTAGTCCTCCAAAAGATAAGTCAGTTGAGCAGAAGGTTGTTGTGTGAAGTTGG--TGGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28058850 432 - 80997621 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATTCCTGGT-TCTCGGGAGATAGCCC---AAAGTGATCATTAAAAGAAGGAAGGAGGATACAAGAATCATGAATATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTGAAGTTT-C---TTAGGTGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGTTGAGATCATGACTCCAAATTGAGAACACACAA-----------------AGCTGGCACATGATCCACAAGGTGTAA-GAAAAAGAGAA----------------TCAGGACGAAG-------TATTCTGCCATCCCTGAAGCTGATTCACAAAATATTAAACATGCAGAGAGTTCATAAAAATGTGGGCGACAGCATGGTGGCTGTCAGCAGC-----AAAGTAAACTAGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGTTGTTGTGAGAAGATAG--TGGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115361 432 + 10377808 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATTCCTGGT-TCTTGGGAGATAGCCC---AAAGTGATCATTAAAAGAAGGAAGGAGGATACAAGAATCATGAATATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGCTGA-----GGAGAATGAAGCTCTTGACTTT---AGAGTCAAAAATGAGATTATGACTCCAAATTGAGAACACACAA-----------------AGCTGGCACATGATCCACAAGGTGTAA-GAAAAAGAGAA----------------TCAGGACGAAG-------TATTCTGCCATCCCTGAAGCTGATTCACAAAATATTAAACATGCAGAGAGTTCATAAAAATGTGGGCGACAGCATGGTGGCTGTCAGCAGC-----AAAGTAAACTAGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGTTGTTGTGAGAAGATAG--TGGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2006737 432 - 8458610 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATTCCTGGT-TCTCGGGAGATAGCCC---AAAGTGATCATTAAAAGAAGGAAGGAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGTGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGTTGAGATCATGACTCCAAATTGAGAACACACAA-----------------AGCTGGCACATGATCCACAAGGTGTAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TACTCTGCCGTCCCTGAAGCGGATTCACAAGATATTAAACATGCAGAGAGTTCATTAAAATGTGGGCGACAGCATGGTGGCTGTCAGCAGC-----AAAGTAAACTGGTCCCCCAAAAGATAAGTCGGTTGAGCAGAAAGTTGTTGTGTGAGGACGG--TGGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64945709 432 + 75148670 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATTCCTGGT-TCTCGGGAGATAGCCC---AAAGTGATCATTAAAAGAAGGAAGGAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGTGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGTTGAGATCATGACTCCAAATTGAGAACACACAA-----------------AGCTGGCACATGATCCACAAGGTATAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCGTCCCTGAAGCTGATTCACAAGATATTAAACATGCAGAGAGCTCATAAAAATGTGGGCGACAGCATGGTGGCTGTCAGCAGC-----AAAGTAAACTAGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGTTGTTGTGAGAAGATAG--TGGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2191604 432 + 4244037 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATTCCTGAT-TCTCGGGAGATAGCCC---AAAGTGATCATTAAAAGAAGGAAGGAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----CATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGTGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGTTGAGATCATGACTCCAAATTGAGAACACACAA-----------------AGCTGGCATATGATCCACAAGGTGTAA-GAAAAAGAGAA----------------TCAGGATGAAG-------TATTCTGCCGTCCCTGAAGCTGATTCACAAGATATTAAACATGCAGAGAGTTCATAAAAATGTGGGCGACAGCATGGTGGCTGTCAGCAGC-----AAAGTAAACTGGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGTTGTTGTGAGAAGATGG--TGGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2210824 431 + 4569836 ATTTATT-------------------------------------AAGAAATA---TATAGGTAAG-ATTCCTGGT-TCTCGGGAGATAGCCC---AAAGTGATCATTAAAAGAAGGAAGGAGGATACAAGAATCATGAGTATATTGAAA-AGAAAA-----TATAGTTGTGAAGA--------------------TTCTTAATCATTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGTGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGTTGAGATCATGACTCCAAATTGAAAACACACAA-----------------AGCTGGCACATGATCCACAACGTGTAA-GAAAAAGAGAA----------------TCAGGATGAAA-------TATTCTG-CATCCCTGAAGCTGATTCACAAGATATTAAACATGCAGAGAGTTCATAAAAATGTGGGCGACAGCATGGTGGCTGTCAGCAGC-----ATAGTGAACTAGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGTTGTTGTGAGAAGATGG--TGGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1347 431 - 12755 ATTTATT-------------------------------------GAGGAGTA---TATAGGTAAGAATCCCTGTT-TTTAGGGAGATAACCC---AAAGTGATCACTAAAAGAAGAAAGGAGGATACACGAATCATGAGTACATTGAAA-AGAAAA-----CATAATCGTGAAGA--------------------TTCTTGATCAGTTGCAGA---------------------AA------------------------------CTTAAGTTT-T---TTAGGGGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGCTGAGACCATGATTCTAAATTGGGAACACATAA-----------------AGCTGGCACATGATCCACAAGGTGTAAGGAAAAAGAGAA----------------TCAAGATGAAG-------TACTCTGACCTCCCACAAGCTGATTGACAAGATTTTAAACATGTAGAGAATTCATAAAAATGTGGACGAGAGCATGGT---TTCTGGCAGC-----AAAGTAAATTGGTCCCCCAAAAGATAAGTTGGTTGAGCAGAAAGCTGTTGTGTGAGGATAG--TGGT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1880518 431 + 3513951 ATTTATT-------------------------------------AAGAAACA---TATAGGTAAGAATCCCTGCT-TCTAGGGAGATAACCC---AAAGTGATCACTAAAAGAAGAAAGGAGGGTACAAGAATCATGAGTACATTGAAA-AGAAAA-----CATAATTGTGAAGA--------------------TTCTTGATCAGTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGGGA-----AGAGAATGAAGCTCTTGATGTT---AGAATCAAAGCTGAAACCATGACTCTAAATTGAGAACACATGA-----------------GGCTGGCACATGAACCACAAGGCGTAAGGAAAAAGAGAA----------------TCAGGATGAAG-------TACTCTGACCTCCCACAAGCTGATTGACAAGATTTTCAACATGTAGAGAATTCATAAAAATGTGGACGAGAGCATGGT---TGCCAGCAGC-----AAAGTAAATTGGTCCACCAAAAGATAAGTTGGTTGAGCAGAGAGCTGTTGTGTGAGGATGG--TGGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16217 431 - 4077172 ATTTATT-------------------------------------AAGGAATA---TACAGGTGAGAATCCCTGTT-TCTAGGGAGATAACCC---AAAGTGATCACTAAAAGAAGAAAGGAGGATACAAGAATCATGAGTACATTGAAA-AGAAAA-----CATAATTGTGAAGA--------------------TTCTTGATCAGTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGGGA-----AGAGAACGAAGCTCTTGACTTT---AGAGTCAAAGCTGAGACCATGACTCTAAATTGAGAACACATGA-----------------GGCTGGCACATGATCCACAAGGTGTAAGGAAAAAGAGAA----------------TCAGGATGAAG-------TACTCTGACCTCCCACAAGCTGATTGACAAGATTTTAAACATGTAGAGAATTCATAAAAATGTGGACGAGAGCATGGT---TGCCAGCAGC-----AAAGTAAATTGGTCCCCCAAAAGATAAGTCAGTTGAGCAGAGAGCTGTTGTGTGAGGATGG--TGGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 9883 429 - 94492 ATTTATT-------------------------------------GAGGAATA---TATAGGTAAGAATCCCTGTT-TCTAGGGAGATAACCC---AAAGTGATCACTAAAAGAAGAAAGGAGGATACAAGAATCATGAGTACATTGAAA-AGAAAA-----CATAATTGTGAAGA--------------------TTCTTGATCAGTTGCAGA---------------------AA------------------------------CTTAAGTTT-C---TTAGGGGA-----AGAGAATGAAGCTCTTGACTTT---AGAGTCAAAGCTGAGACCGTGACTCTAAATTGAGAACGCATGA-----------------AGCTGGCACATGATCCACAAG--GTAAGGAAAAAGAGAA----------------TCAGGATGAAG-------TACTCTGACCTCCCACAAGCTGATTGACAAGATTTTAAACAAGTAGAGAATTCATAAAAATGTGGATGAGAGCATGGT---TGCCAGCAGC-----AAAGTAAATTGGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGCTGTGGTGTGAGGATGG--TGGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22874997 429 + 28711273 ATTTATT-------------------------------------AGGAATTAAACTCCATGTAAG-------------TAGGGAGAGAATGT---AAAGTGGGCATAAAGGGTAAAGGATAGGGCACAAAAATAGTGAATTCATTGGGA-AAAATATCACTCATTATTGGGAAGAGTTCAGAGAAAAGCCATAGGTTTTTGTCTGTTTGCTGA---------------------GT------------------------------TTTGGGGCTAC---TTAGAGTG-----AAAGGATGAAGATGT--------------CCACATCTGAGAACATGACTCAAGATTAAGAACAGGCAAAATAGACCAAGAGCTGGAGCTGCCACTTG----ACAGCTACTGA-GGAGAAAAG--------------------TGGATGAAG-------TAGGCTGAC-TCCATCAAGCAGACACTTGAGACCCTTAATAACAAGACAATCCAAGGGTAGATGGATGATAGCAAGCC----------------------TAGAGGGG--CTGCATGAGCTTGGTTGGCTGA-TGCCAAGTTGAAATGTGGTGAGTGTTTGGT i otoGar3.GL873537 I 7279 C 0 s canFam3.chr9 21521022 474 + 61074082 ----ATT-------------------------------------AA--AAGG---TATAGGTGAGACCTCCCCCC-TGCATGGAGGGAGCCCTTTGATGTGTTCATGCAAGGATGAGAAAAGGATACAAGGACTGTGAGGACACGGAAAGAGAAAA-----CATGAT-GCCAAGA--------------------CT-TTCATTAGTGGCAGACCTCTGTACAATAGGCATAAGGA------------------------------CTTGTGTCT-CTAATTTAGTGATACAGATAGGATGAAGATCTTGACTATGAAGGAGTCAAGGCAAAGGTCGTGATTCCAAATC-AGGATGCATGA-----------------G--TGGCACATGATCCATAAGATGAAA-GAAGAAGAGAATAATAATCCATAAGATTAAGGAAGAAGGGATAAATGGTCCACATTTCATCAAGCTTACTCATTAGCTTGTAAATAGGCAGATGAGTGACAAAAACATTGGCAATTGTATGCTGGCTTTGAGAAACGTTTGACAGTAACTTTGTTTCCCAAACAGCAATTTTTT------------TTTTTTCCGATGATGG--CTCT i canFam3.chr9 C 0 T 18894 s dasNov3.JH570468 560733 463 - 852752 ATTTCTT-------------------------------------TAGAAACG---AATGCATAAG-ACCCCTTGCATCAAGGGAGGCAAGTC---AAAGTGATCATAAAAAGAAGATATCATGACACAAGAATCATGGCTATATTAATA-ATAAAA-------TGATTATGTAGA--------------------TGATGGATCAATTACAGA---------------------AACCTATCAAAAGAGTTATGGGCACTTGTTTGCTTAAGTTA-C---TTGGAGGT-----AGTGG-TGAATTTCTCGGCATC---AGAGTGAAAGCTGAGGACATTCGGACATGTCGTGAATATAAAA-----------------AG-TAACACACAATCCAGAAGACATGAGGAAGAAGGTAA----------------TCAGGGTAAAA-------GAGTCCACACTCCACCAGGCGGATTCATAAACTTTTCAACATGCTGATGAATAACT-CCATTTTATTGAGAGCATGCTGGTTGTCAGTAAGTCTAGAAAGAGATTTTGTCCCAGGAATGGTGGATCTGTTGA-TAGAAGGTTGATCTGTGCAGTTGG--TGGT i dasNov3.JH570468 I 6 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=313424.000000 s hg38.chr17_JH159148v1_alt 51199 28 + 88070 TCTC-TTGGGAC--TTGATCAGCAGCAAGAA s panTro5.chr17 16362260 28 + 83181570 TCTC-TTGGGAC--TTGATCAGCAGCAAGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267185 28 + 83442489 TCTC-TTGGGAC--TTGATCAGCAGCAAGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114141 28 + 4267968 TCTC-TTGGGAC--TTGATCAGCAGCAAGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102596 28 - 2193130 TCTC-TTGGGAC--TTGATCAGCAGCAAGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059282 28 - 80997621 TCTC-TTGGGAG--TTGATCAGCAGCAAGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115793 28 + 10377808 TCTC-TTGGGAG--CTGATCAGCAGCAAGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007169 28 - 8458610 TCTC-TTGGGAG--TTGATCAGCAGCAAGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946141 28 + 75148670 TCTC-TTGGGAA--TTGATCAGCAGCAAGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192036 28 + 4244037 TCTC-TTGGGAG--TTGATCAGCAGCAAGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211255 28 + 4569836 TCTC-TTGGCAG--TTGATCAGCAGCAAGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1778 28 - 12755 TCTC-TTGGGAG--TTAATCAGCAGCAAGAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1880949 28 + 3513951 TCTC-TTGGGAG--TTAATCACCAGCAAGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16648 28 - 4077172 TCTC-TTGGGAG--TTAATTAGCAGCAAGAA i cebCap1.NW_016107543v1 C 0 T 6142 s aotNan1.NW_018505111v1 10312 28 - 94492 TCTC-TTGGGAG--TTAATCAGCAGCAAGAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875426 31 + 28711273 CTTCATTAGGAGTATTGATCAGCAGCAGGAA i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502602 28 + 61074082 TCTA-TAGCAAG--TTGCTCAGCAGCAGCAA i canFam3.chr9 T 18894 C 0 s dasNov3.JH570468 561196 27 - 852752 -TTT-TTGCAAG--TTGATCAGCAGCAGGAA i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=30600.000000 s hg38.chr17_JH159148v1_alt 51227 2 + 88070 GG s panTro5.chr17 16362288 2 + 83181570 GG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267213 2 + 83442489 GG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114169 2 + 4267968 GG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102624 2 - 2193130 GG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059310 2 - 80997621 GG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115821 2 + 10377808 GG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007197 2 - 8458610 GG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946169 2 + 75148670 GG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192064 2 + 4244037 GG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211283 2 + 4569836 GG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1806 2 - 12755 GG i calJac3.chr5_ACFV01180105_random C 0 I 6028 s saiBol1.JH378271 1880977 2 + 3513951 GG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10534 2 - 4077172 GG i cebCap1.NW_016107543v1 T 6142 C 0 s aotNan1.NW_018505111v1 10340 2 - 94492 GG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875457 2 + 28711273 GG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502630 2 + 61074082 GG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561223 2 - 852752 GG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=15300.000000 s hg38.chr17_JH159148v1_alt 51229 1 + 88070 C s panTro5.chr17 16362290 1 + 83181570 C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267215 1 + 83442489 C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114171 1 + 4267968 C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102626 1 - 2193130 C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059312 1 - 80997621 C i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115823 1 + 10377808 C i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007199 1 - 8458610 C i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946171 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192066 1 + 4244037 C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211285 1 + 4569836 C i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7836 1 - 12755 C i calJac3.chr5_ACFV01180105_random I 6028 C 0 s saiBol1.JH378271 1880979 1 + 3513951 C i saiBol1.JH378271 C 0 T 12401 s cebCap1.NW_016107543v1 10536 1 - 4077172 C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10342 1 - 94492 C i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875459 1 + 28711273 C i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502632 1 + 61074082 C i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561225 1 - 852752 C i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=267542.000000 s hg38.chr17_JH159148v1_alt 51230 21 + 88070 TGGCAGCAGCTGGACACACAG s panTro5.chr17 16362291 21 + 83181570 TGGCAGCAGCTGGACACACAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267216 21 + 83442489 TGGCAGCAGCTGGACACACAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114172 21 + 4267968 TGGCAGCAGCTGTACACACAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102627 21 - 2193130 TGGCAGCAGCTGGACACACAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059313 21 - 80997621 TGGCAGCAGCTGGACACACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115824 21 + 10377808 TGGCAGCAGCTGGACACACAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007200 21 - 8458610 TGGCAGCAGCTGGACACACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946172 21 + 75148670 TGGCAGCAGCTGGACACACAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192067 21 + 4244037 TGGCAGCAGCTGGACACACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211286 21 + 4569836 TGGCAGCAGCTGGACACACAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7837 21 - 12755 TGGCAGCAGCTGGACACACAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868579 21 + 3513951 TGGCAGCAGCTGGACACACAG i saiBol1.JH378271 T 12401 C 0 s cebCap1.NW_016107543v1 10537 21 - 4077172 TGGCAGCAGCTGGACACACAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10343 21 - 94492 TGGCAGCAGGTGGTCACACAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875460 14 + 28711273 TGGCAGCAGCTGGA------- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502633 21 + 61074082 TGGCAGCAGCTGGATCCACAG i canFam3.chr9 C 0 I 150 s dasNov3.JH570468 561226 21 - 852752 TGACAGCAACTGGACACACAG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=690544.000000 s hg38.chr17_JH159148v1_alt 51251 60 + 88070 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCGGGGCGGCAGCAG s panTro5.chr17 16362312 60 + 83181570 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267237 60 + 83442489 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114193 60 + 4267968 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAgcaggctgggcggcagcag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102648 60 - 2193130 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059334 60 - 80997621 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115845 60 + 10377808 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007221 60 - 8458610 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAACAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946193 60 + 75148670 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192088 60 + 4244037 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211307 60 + 4569836 ------------------GTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7858 60 - 12755 ------------------GTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868600 60 + 3513951 ------------------GTGGGTTGGCAGCATGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGTGGCAGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10558 60 - 4077172 ------------------GTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTCACAGCTGGCTGGGCGGCAGCAG i cebCap1.NW_016107543v1 C 0 I 6058 s aotNan1.NW_018505111v1 10364 60 - 94492 ------------------GTGGGCTGGCAGCAGATGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGTAGCAG i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21502804 60 + 61074082 ------------------GTGGGCTTGCAGCAGGTGGTCCTACAGCAGGTGGTTTGACAGCAAGTTGGGCGGCAGCAG i canFam3.chr9 I 150 I 3 s dasNov3.JH570468 561247 77 - 852752 CAAAAGCTGCTGCAGTAGCTGGGGTGGCTGCACGTGTTTCTACAGCA-GTGGTCTGACAGCAGGATGGGTGGCAGCAG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22875474 0 + 28711273 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=27200.000000 s hg38.chr17_JH159148v1_alt 51311 2 + 88070 GG s panTro5.chr17 16362372 2 + 83181570 GG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267297 2 + 83442489 GG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114253 2 + 4267968 gg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102708 2 - 2193130 GG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059394 2 - 80997621 GG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115905 2 + 10377808 GG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007281 2 - 8458610 GG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946253 2 + 75148670 GG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192148 2 + 4244037 GG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211367 2 + 4569836 GG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7918 2 - 12755 GG i calJac3.chr5_ACFV01180105_random C 0 T 6112 s saiBol1.JH378271 1868660 2 + 3513951 GG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16676 2 - 4077172 GG i cebCap1.NW_016107543v1 I 6058 C 0 s aotNan1.NW_018505111v1 10424 2 - 94492 GG i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21502867 2 + 61074082 GG i canFam3.chr9 I 3 C 0 s dasNov3.JH570468 561324 2 - 852752 GG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22875474 0 + 28711273 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=13600.000000 s hg38.chr17_JH159148v1_alt 51313 1 + 88070 C s panTro5.chr17 16362374 1 + 83181570 C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267299 1 + 83442489 C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114255 1 + 4267968 c i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102710 1 - 2193130 C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059396 1 - 80997621 C i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115907 1 + 10377808 C i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007283 1 - 8458610 C i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946255 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192150 1 + 4244037 C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211369 1 + 4569836 C i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1808 1 - 12755 C i calJac3.chr5_ACFV01180105_random T 6112 C 0 s saiBol1.JH378271 1868662 1 + 3513951 C i saiBol1.JH378271 C 0 I 12317 s cebCap1.NW_016107543v1 16678 1 - 4077172 C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10426 1 - 94492 C i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21502869 1 + 61074082 C i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561326 1 - 852752 C i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22875474 0 + 28711273 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=832294.000000 s hg38.chr17_JH159148v1_alt 51314 82 + 88070 TGGCAGCAGCTGGATCCACAGCT-CTGGTTGAGGCAACCAGGCAGGCAGACAGTCGTCGGGTAGTAGCAGGTTCTTCTGCAGT s panTro5.chr17 16362375 82 + 83181570 TGGCAGCAGCTGGATCCACAGCT-CTGGTTGAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAGTAGCAGGTTCTTCTGCAGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267300 82 + 83442489 TGGCAGCAGTTGGAGCCACAGCT-CTGGTTGAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAGTAGCAGGTTCTTCTGCAGT i panPan2.chr17 C 0 I 28587 s gorGor5.CYUI01015385v1 4114256 82 + 4267968 tggcagcagctggagccacagct-caggtttaggcaaccaggcaggcagacagTCGTGGGGTAGTAGCAGGTTCTTCTGCAGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102711 82 - 2193130 TGGCAGCAGCTGGAGCCACAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAGTAGCAGGTTCTTCTGCAGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059397 82 - 80997621 TGACAGCAGCTGGATCCATAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115908 82 + 10377808 TGGCAGCAGCTGGATCCATAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACATATGTGGGGTGGTAGCAGGTTCTTCTGCAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007284 82 - 8458610 TGGCAACAGCTGGATCCATAGCT-CTGGTCTAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946256 82 + 75148670 TGGCAGCAGCTGGATCCATAGCT-CTGATTTAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192151 82 + 4244037 TGGCAGCAGCTGGATCCATAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACACTTGTGGGGTGGTAGCAGGTTCTTCTGCAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211370 82 + 4569836 TGGCAGCAGCTGGATCCATAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACACATGTGGGGTGATAGCAGGTTCTTCTGCAGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1809 82 - 12755 TGGCAGCAGCTGGATCCACAGCT-CTGGTTTAGGCAACCAGGAAGGCAGACACACGTGGGGTAGTAGCAGGTTCTCGTGCAGT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1880980 82 + 3513951 TGGCAGCAGCTGGATCCACAGCT-CTGGTTTAGGCAACCAGGCAGACAGACACATGTGGGGTGGTAGCAGGTTCTGCTGCAGT i saiBol1.JH378271 I 12317 C 0 s cebCap1.NW_016107543v1 16679 82 - 4077172 TGGCAGCAGCTGGATCCACAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACACATGTGGGATGGTAGCAGGTTCTGCTACAGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10427 82 - 94492 TGGCAGCAGCTGGATCCACAGCT-CTGGTTTAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCCTGCAGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875474 68 + 28711273 --------------TCCACAGCC-CAGGTTCAGACAACCAGGCAGGCAGACGCATGTGGGCTGGTAGCAGGTCCTGGTGCAGT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502870 31 + 61074082 TGGCAGCAGCTGGACCCGCAGCCACTGG--------ACC-------------------------------------------- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561327 67 - 852752 TGGCAGCAGCTGGATTTGCAGCT-CTGGGGTTGGCAGCCAGGCAGGCAG---------------TAGCAAGTGTGGGAGCAGT i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=290848.000000 s hg38.chr17_JH159148v1_alt 51396 29 + 88070 ACACAGGTGCACAGGAGCTGCTCTGGCCA s panTro5.chr17 16362457 29 + 83181570 ACACAGGTGCACAGGAGCTGCTCTGGCCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295969 29 + 83442489 ACACAGGTGCACAGGAGCTGCTCTGGCCA i panPan2.chr17 I 28587 C 0 s gorGor5.CYUI01015385v1 4114338 29 + 4267968 ACACAGGTGCACAGGAGCTGCTCTGGCCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102793 29 - 2193130 ACACAGGTGCACAGGAGATGCTCTGGCCA i nomLeu3.chrUn_GL397460_1 C 0 I 6917 s macFas5.chr16 28059479 29 - 80997621 AGACAGGTGCACAGGAGCTGGTCTGGTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2115990 29 + 10377808 AGACAGGTGCACAGGAGCTGGTCTGGTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007366 29 - 8458610 AGACCGGTGCACAGGAGCTGGTCTGGCCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946338 29 + 75148670 AGACAGGTGCACAGGAGCTGGTCTGGCCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192233 29 + 4244037 AGACAGGTGCACAGGAGCTGGTCTGGCCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211452 29 + 4569836 AGACAGGTGCACAGGAGCTGGTCTGGCCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1891 29 - 12755 ACACAGGTGCACAGGAGCTGGTCTGGCCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881062 29 + 3513951 ACACAGGTGCACAGGAGCTAGTCTGGCCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16761 29 - 4077172 ACACAGGTGCACAGGAGCTGGTCTGGCCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10509 29 - 94492 ACACAGGTGCACAGGAGCTGGTCTGGCCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875542 29 + 28711273 AGACGGGTGCACAGCTGCTGGGCTGGCAG i otoGar3.GL873537 C 0 I 15 s canFam3.chr9 21502901 20 + 61074082 ---------CACAGCAGCTGGGCTGGCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561394 11 - 852752 -----------CAGG-------CTGGCAG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=253652.000000 s hg38.chr17_JH159148v1_alt 51425 30 + 88070 CAGCTGGACCCACAGCTGGTTTGGCCACAG s panTro5.chr17 16362486 30 + 83181570 CAGCTGGACCCACAGCTGGTTTGGCCACAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295998 30 + 83442489 CAGCTGGACCCACAGCTGGTTTGGCCACAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114367 30 + 4267968 CAGCTGGACCCACAGCTGGTTTGGCCACAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109739 30 - 2193130 CAGCTGGACCCACAGCTGGTTTGGCCACAG i nomLeu3.chrUn_GL397460_1 I 6917 T 6947 s macFas5.chr16 28059508 30 - 80997621 CAGCTGGACCCACAGCTGGTTTGGCCACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116019 30 + 10377808 CAGCTGGACCCACAGCTGGTTTGGTCACAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007395 30 - 8458610 CAGCTGGACCCACAGCTGGTTTGGCCACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946367 10 + 75148670 CAGCTGGACC-------------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192262 30 + 4244037 CAGCTGGACCCACAGTTGGTTTGGCCACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211481 30 + 4569836 CAGCTGGACCCACAGCAAGTTTGGCCACAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1920 30 - 12755 CAGCTGGAGCCACAGCTGGTTTGGCCACAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881091 30 + 3513951 CAGCTGGACCCACAGCTGGTTTGGCCACAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16790 30 - 4077172 CAGCTGGACCCACAGCAGGTGGGCTGACAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10538 18 - 94492 CAGCC------------GGTTTGGCCACAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875586 27 + 28711273 CAAGTGGGGAGGCAGCAGGGCTGGCAG--- i otoGar3.GL873537 I 15 C 0 s canFam3.chr9 21502921 30 + 61074082 CAGCTGGACACACAGCATGCGGGCTTGCAG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561405 30 - 852752 CAGCTGGACCCACAGGAGGTTTGGCCACAA i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=56347.000000 s hg38.chr17_JH159148v1_alt 51455 6 + 88070 CAGCTG s panTro5.chr17 16362516 6 + 83181570 CAGCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296028 6 + 83442489 CAGCTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114397 6 + 4267968 CAGCTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102822 6 - 2193130 CAGCTG i nomLeu3.chrUn_GL397460_1 T 6947 C 0 s macFas5.chr16 28059538 6 - 80997621 TAGCTG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116049 6 + 10377808 TAGCTG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007425 6 - 8458610 CAGCTG i cerAty1.NW_012006043v1 C 0 I 5669 s manLeu1.NW_012106252v1 2192292 6 + 4244037 CAGCTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211511 6 + 4569836 CAGCTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1950 6 - 12755 CAGCTG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881121 6 + 3513951 CAGCTG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16820 6 - 4077172 CAGGGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10556 6 - 94492 CAGCTG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875613 6 + 28711273 CAGCTG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502951 6 + 61074082 CAGGTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561435 6 - 852752 GAACTG i dasNov3.JH570468 C 0 C 0 e chlSab2.chr16 64946377 0 + 75148670 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=366063.000000 s hg38.chr17_JH159148v1_alt 51461 45 + 88070 GACC---------------------------------------------------------------------------------------------------CACAGCAGATGGGCTGGCAGCAGGTTGTGCTGCAGCAGGAA s panTro5.chr17 16362522 45 + 83181570 GACC---------------------------------------------------------------------------------------------------CACAGCAGATGGGCTGGCAGCAGGGTGTGCTGCTGCAGGAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296034 45 + 83442489 AACC---------------------------------------------------------------------------------------------------CACAGCAGATGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114403 45 + 4267968 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102828 45 - 2193130 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059544 45 - 80997621 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116055 45 + 10377808 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013100 45 - 8458610 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i cerAty1.NW_012006043v1 I 5669 C 0 s chlSab2.chr16 64946377 41 + 75148670 -------------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192298 144 + 4244037 GACCCACAGCAGGTGGGCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGTTTTGACAGCAAATTGGGTGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211517 45 + 4569836 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGTAGGAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1956 15 - 12755 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTG------------------------------ i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881127 45 + 3513951 GACC---------------------------------------------------------------------------------------------------CACAGCAGGTGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16826 15 - 4077172 GTGC---------------------------------------------------------------------------------------------------TACAGCAGGAA------------------------------ i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10562 45 - 94492 GACC---------------------------------------------------------------------------------------------------CGCAGCAGGTGGGCTGGCAGCAGGGCACGCTGCAGCAGGAA i aotNan1.NW_018505111v1 C 0 I 108 s otoGar3.GL873537 22875619 43 + 28711273 GACA---------------------------------------------------------------------------------------------------CACAGCAGCTGGACTGGCAGCAGGGTGTGCTACAGCAGG-- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21502957 45 + 61074082 GTCC---------------------------------------------------------------------------------------------------TACAGCAGGTGGTCTGACAGCACGTTGGGCGGCAGCAGCAA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561441 45 - 852752 GACC---------------------------------------------------------------------------------------------------CACAGCTGGTGGGCTGGCAGCAGGAATTGCTGCAACAGGAA i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=311210.000000 s hg38.chr17_JH159148v1_alt 51506 25 + 88070 GGCTGGCAGCAGCTGGTCAGACAGG s panTro5.chr17 16362567 25 + 83181570 GGCTGGTAGCAGCTGGTCACACAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296079 25 + 83442489 GGCTGGCAGCAGCTGGTCACACAGG i panPan2.chr17 C 0 T 28501 s gorGor5.CYUI01015385v1 4114448 25 + 4267968 GGCTGGCAGCAGCTGGTCACACAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102873 25 - 2193130 GGCTGGCAGCAGCTGGTCACACAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059589 25 - 80997621 GGCTGGCAGCAGCTGGTCACACAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116100 25 + 10377808 GGCTGGCAGCAGCTGGTCACACAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013145 25 - 8458610 GGCTGACAGCAGCTGGTCACACAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946418 25 + 75148670 GGCTGGCAGCAGCTGGTCACACAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192442 25 + 4244037 GGCTGGCAGCAGCTGGTCACACAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211562 25 + 4569836 GGCTGGCAGCAGCTGGTCACACAGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1971 25 - 12755 GGCTGGCAGCAGCTGGTCACACAGG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881172 25 + 3513951 GGCTGGCAGCAGCTGGTCACACAGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16841 25 - 4077172 GGCTGGCAGCAGCTGGTCACACAGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10715 25 - 94492 GGCTGGCAGCAGCTGGTCACACAGG i aotNan1.NW_018505111v1 I 108 C 0 s otoGar3.GL873537 22875662 12 + 28711273 -------------TGGTGACAGAGG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503002 25 + 61074082 GGCTGGCAGCAGCTGGACACACAGC i canFam3.chr9 C 0 I 3 s dasNov3.JH570468 561486 25 - 852752 GGGTGGCAGCAGCTGGGCACACAGG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=547173.000000 s hg38.chr17_JH159148v1_alt 51531 62 + 88070 TGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGCTGGGCGGCAGC---AAGGC s panTro5.chr17 16362592 47 + 83181570 TGGGCTG---------------GCAACAGGTGTTTTGACAGCAAGCTGGGCGGCAGC---AAGGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267603 60 + 83442489 TGGGCTGGCAGCAGGTGATCCTGCAGCAGGNG-TTTGACAGCAAGCT-GGTGGCAGC---AAGGC i panPan2.chr17 T 28501 C 0 s gorGor5.CYUI01015385v1 4114473 62 + 4267968 TGGGCTGGCAGCCGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGCTGGGCGGCAGC---AAGGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102898 62 - 2193130 TGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTTGGGTGACAGC---AAGGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059614 47 - 80997621 TGGGCTG---------------GCAGCATGTGTTTTGACAGCAAGTTGGGCGGCAGC---AAGGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116125 47 + 10377808 TGGGCTG---------------GCAGCAGGTGTTTTGACAGCAAGTTGGGCGGCAGC---AAGGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013170 47 - 8458610 TGGGCTG---------------GCAGCAGGTGTTTTGACAGCAAATTGGGTGGCAGC---AAGGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64946443 47 + 75148670 TGGGCTG---------------GCAGCAGGTATTTTGACAGCAAGTTGGGCGACAGC---AAGGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192467 47 + 4244037 TGGGCTG---------------GCAGCAGGTGTTTTGATAGCAAGTTGGGCGGCAGC---AAGGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211587 47 + 4569836 TGGGCTG---------------GCAGCAGGTGTTTTGACAGCAAATTGGGTGGCAAC---AAGGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 1996 62 - 12755 TGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTTGGGCGGCAGC---AAGGC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881197 62 + 3513951 TGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTTGGGTGGCAGC---AAGGC i saiBol1.JH378271 C 0 I 115 s cebCap1.NW_016107543v1 16866 62 - 4077172 TGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCATGTTGGGCGGCAGC---AAGGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10740 62 - 94492 TGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCATGTTGGGCGGCAGC---AAGGC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875674 57 + 28711273 TGGGTTTCCAGCAGGTAGTTCTGCAGCAGGTGGTTGGACAGCAAGTTGGGAGGCAGC-------- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503030 65 + 61074082 CGGGCTTGCAGCAGGTGGTCCTACAGCAGGTGGTCTGACAGCACGTTGGGCGGCAGCAGCAAGGC i canFam3.chr9 I 3 I 45 s dasNov3.JH570468 561511 47 - 852752 TTGGCCG---------------GCAGCAGGTGGTCTGACAGCAGAGTGGGCGGCAGC---AAGGC i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=144199.000000 s hg38.chr17_JH159148v1_alt 51593 12 + 88070 TGGCAGCAGCTA s panTro5.chr17 16362639 12 + 83181570 TGGCAGCAGCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267663 12 + 83442489 NGGCAGCAGCTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114535 12 + 4267968 TGGCAGCAGCTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102960 12 - 2193130 TGGCAGCAGCTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059661 12 - 80997621 TGGCAGCAGCTG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116172 12 + 10377808 TGGCAGCAGCTG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013217 12 - 8458610 TGGCAGCAGCTG i cerAty1.NW_012006043v1 C 0 T 5798 s chlSab2.chr16 64946490 12 + 75148670 TGGCAGCAGCTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192514 12 + 4244037 TGGCAGCAGCTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211634 12 + 4569836 TGGCAACAGCTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 2058 12 - 12755 TGGCAGCAGCTG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881374 12 + 3513951 TGGCAGCAGCTG i saiBol1.JH378271 I 115 C 0 s cebCap1.NW_016107543v1 16928 12 - 4077172 TGGCAGCAGCTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 10802 12 - 94492 TGGCAGCAGCTG i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21503140 12 + 61074082 TGGCAGCAGCTG i canFam3.chr9 I 45 C 0 s dasNov3.JH570468 561558 12 - 852752 TGGAAGCAGCTG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22875731 0 + 28711273 C e rheMac8.chr16 30139106 31425 - 77216781 I a score=371797.000000 s hg38.chr17_JH159148v1_alt 51605 35 + 88070 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT s panTro5.chr17 16362651 35 + 83181570 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267675 35 + 83442489 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114547 35 + 4267968 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2102972 35 - 2193130 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059673 35 - 80997621 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116184 65 + 10377808 GACACACAGCAGGAGGGCTGGCAGCAGCTGGACACACAGCAGGTGGGCTGGCAGCAGGGTGTGCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007431 35 - 8458610 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i cerAty1.NW_012006043v1 T 5798 C 0 s chlSab2.chr16 64946502 35 + 75148670 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192526 35 + 4244037 GACACACAGCTGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2211646 35 + 4569836 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGAGCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 2070 35 - 12755 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881386 35 + 3513951 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16940 35 - 4077172 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i cebCap1.NW_016107543v1 C 0 T 6040 s aotNan1.NW_018505111v1 10814 35 - 94492 GACACACAGCAGGA------------------------------GGGCTGGCAGCAGGGTGTGCT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875731 22 + 28711273 -------------A------------------------------GGGCTGGCAGCAGGGTGTGCT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503152 35 + 61074082 GACACAGAGCATGC------------------------------GGGCTTGCAGCACGTGGTCCT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561570 17 - 852752 GACCCACA-----A------------------------------GAACTGGA------------- i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=443693.000000 s hg38.chr17_JH159148v1_alt 51640 51 + 88070 GCTGCAGG---------------TGGT-----------------------------------------------CACA-GT-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT s panTro5.chr17 16362686 51 + 83181570 GCTGCAGG---------------TGGT-----------------------------------------------CACA-GT-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCACGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267710 66 + 83442489 GCTGCAGG---------------TGGT-----------------------------------------------CACA-GT-GGTGGGCTTCCAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114582 66 + 4267968 GCTGCAGG---------------TGGT-----------------------------------------------CACA-GT-GGTGGGCTTCCAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCAGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103007 66 - 2193130 GCGGCAGG---------------TGGT-----------------------------------------------CACA-GT-GGTGGGCTTCCAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059708 51 - 80997621 GCTGCAGG---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i macFas5.chr16 C 0 I 15 s macNem1.NW_012014910v1 2116249 51 + 10377808 GCTGCAGG---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i macNem1.NW_012014910v1 C 0 I 15 s cerAty1.NW_012006043v1 2007466 51 - 8458610 GCTGCAGG---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i cerAty1.NW_012006043v1 C 0 I 15 s chlSab2.chr16 64946537 51 + 75148670 GCTGCAGG---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i chlSab2.chr16 C 0 I 20296 s manLeu1.NW_012106252v1 2192561 51 + 4244037 GCTGCAGG---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i manLeu1.NW_012106252v1 C 0 I 15 s colAng1.NW_012122154v1 2211681 67 + 4569836 GCAGCAGGAAGGCTGGCAGCAGCTGGT-----------------------------------------------CACA-CGTGGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i colAng1.NW_012122154v1 C 0 I 15 s calJac3.chr5_ACFV01180105_random 2105 51 - 12755 GCAGCAGC---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i calJac3.chr5_ACFV01180105_random C 0 I 15 s saiBol1.JH378271 1881421 51 + 3513951 GCTGCAGC---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i saiBol1.JH378271 C 0 I 15 s cebCap1.NW_016107543v1 10935 51 - 4077172 GCTGCAGC---------------TGGT-----------------------------------------------CACA-CA-GGTGGGCTTC---------------CAGCAGGTGGTCCTGCAGCAGGT i cebCap1.NW_016107543v1 T 6040 I 75 s aotNan1.NW_018505111v1 10849 48 - 94492 GCTGCAGG---------------TGGT-----------------------------------------------CACA-CT-GGTGGGCTCC---------------CAGCAGGTGGTCCTGCAGCA--- i aotNan1.NW_018505111v1 C 0 I 3 s otoGar3.GL873537 22875753 51 + 28711273 GCAGCAGG---------------TGGT-----------------------------------------------CTCA-CA-GGTGGGTTGC---------------CAGCAGGTGGTCCTGCAGCAGGT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503187 99 + 61074082 GCAGCAGG---------------TGGTGTGACAGCACGTTGGGCGGCAGCAGCAAGGCTCGCAGCAGCTGGATCCACAGCA-GCTGGGTTCG---------------CAGCAGGTGGTCCTGCAGCACGT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561587 12 - 852752 ----------------------------------------------------------------------------------------------------------------------CCCACAGCTGGT i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=1398053.000000 s hg38.chr17_JH159148v1_alt 51691 120 + 88070 AGGCTGACAGCAAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACCTTTTATACACC s panTro5.chr17 16362737 120 + 83181570 AGGCTGACAGCATGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTAGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACCTTTTATACACC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16267776 120 + 83442489 AGGCTGACAGCAAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACCTTTTATACACC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114648 120 + 4267968 AGGCTGACAGCAAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGTTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACCTTTTATACACC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103073 120 - 2193130 AGGCTGACAGCAAGGGGAGCAAC---AGTGGGTCATGGTTTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACCTTTTATACACC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059774 120 - 80997621 AGGCTGACAGCAAGGGGAGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAAG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTACAATCTGGACCTTTTATACACC i macFas5.chr16 I 15 C 0 s macNem1.NW_012014910v1 2116315 120 + 10377808 AGGCTGGCAGCAAGGGGAGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAAG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGACCTTTTATACACC i macNem1.NW_012014910v1 I 15 C 0 s cerAty1.NW_012006043v1 2007532 120 - 8458610 AGGCTGACAGCAAGGGGAGCAAC---AGTGGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGACCTTTTATACACC i cerAty1.NW_012006043v1 I 15 C 0 s chlSab2.chr16 64966884 120 + 75148670 AGGCTGGCAGCAAGAGGAGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAATTTCCCAGAAT----CTGATGACCCCTTGCAATCTGGACTTTTTATACACC i chlSab2.chr16 I 20296 C 0 s manLeu1.NW_012106252v1 2192627 120 + 4244037 AGGCTGACAGCAAGGGGAGCAAC---AGTTGGTCATGGTGTCAGGGATGGAGG-GTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAAT----GTGATGACCCCTTGCAATCTGGACCTTTTATACACC i manLeu1.NW_012106252v1 I 15 C 0 s colAng1.NW_012122154v1 2211763 120 + 4569836 AGGCTGACAGCAAGGGGAGCAAC---AGTTGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTTCTGTTCAGAGGTGAATTTCCCAGAAT----CTGATGACCCCTTGCAATCTAGACCTTTTATACACC i colAng1.NW_012122154v1 I 15 C 0 s calJac3.chr5_ACFV01180105_random 2171 120 - 12755 AGGCTGGCAGCAAGGGGAGCAGC---AGTGGGTCATGATGTCAGGGATGGAGG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCTTCCAATCTGGACCTTTTATACATG i calJac3.chr5_ACFV01180105_random I 15 C 0 s saiBol1.JH378271 1881487 120 + 3513951 AGGCTGGCAGCAAGGGGAGCAGC---AGTAAGTCATAGTGTCAGGGGTGGAGG-GTGAGTTCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCCTCCAATCTGGGCCTTTTATACATC i saiBol1.JH378271 I 15 C 0 s cebCap1.NW_016107543v1 11061 120 - 4077172 AGGCTGGCAGCAAGGGGAGCAGC---AGTAGGTCATGGTGTCAGGGGTGGAGG-GTGGGCTCCTGTTCAGAGGTGAGTTTCCCGGAAT----CTGACGGCTCCTTCCAATCTGGGCCTTTTATACACC i cebCap1.NW_016107543v1 I 75 I 6010 s aotNan1.NW_018505111v1 10900 120 - 94492 AGGCTGGCAGCAAGGGGAGCAGC---AGTCGGTCATGGTGTCAGGGGCGGAGG-GTGGGATCCTGTTCAGAGGTGAGTTTCCCAGAAT----CTGGTGACTCCTTCCAATCTGGGCCTTTTATACACC i aotNan1.NW_018505111v1 I 3 C 0 s otoGar3.GL873537 22875804 119 + 28711273 GGGTTGGCAACAAGAGGAGCAGC---AGTGGGTCATGGTGTC-TGTATCGAGG-ATGGGTTCCTGTTCAGAGGTGACCTTCCTAGAAT----CTGCTGATGTCTTCCAATATGGGCCTTTTATACACT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503286 128 + 61074082 GGGCTGGCAGCACGGGGAGCAGCACGATTCACTCATGGTGTCGCAGGTGGAGGCGTGGGCTTCTGTTCTGAGGTGACGTTCTCAGATTCTGACTGATGCCTCCTTCCATTCTGGGGCTTTTATACACT i canFam3.chr9 C 0 I 8 s dasNov3.JH570468 561599 116 - 852752 GGGCTGGCAGCAGGGAGAGCAGC---AGGAGGTCATGGTGTCAGGGTTGAAGG---GGATTCCTGTTCAGAGATG--TTTCCCAGAAT----CTGATGATTCCTTTAATTCTGCATCTTTTATATACT i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=871638.000000 s hg38.chr17_JH159148v1_alt 51811 89 + 88070 TGGCTTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACACTGTTTTCCACAG-TCCCTTTGGGATTGTCAAAGGGG s panTro5.chr17 16362857 88 + 83181570 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTTCTGTTTACATTGTTTTCC-CAG-TCCGTTTGTGATTCTCAAAGGGT i panTro5.chr17 C 0 I 5511 s panPan2.chr17 16267896 89 + 83442489 TGGCTTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACACTGTTTTCCACAG-TCCCTTTGGGATTGTCAAAGGGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114768 89 + 4267968 TGGCTTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACACTGTTTTCCACAG-TCCCTTTGGGATTGTCAAAGGGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103193 87 - 2193130 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCC-CAG-TCCGTTTGTGATTCTCAAAGGG- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059894 87 - 80997621 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACATTGTTTTCCACAG-TGCGTTTGTGA-TCTCAAAGGG- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116435 89 + 10377808 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACATTGTTTTCCACAG-TGCGTTTGTGATTCTCAAAGGGT i macNem1.NW_012014910v1 C 0 I 16738 s cerAty1.NW_012006043v1 2007652 89 - 8458610 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACATTGTTTTCCACAG-TGCATTTGTGATTCTCAAAGGGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967004 89 + 75148670 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCCACAA-TCCTTTTGGGATTGTCAAAGGGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192747 89 + 4244037 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACATTGTTTTCCACAG-TGCATTTGTGATTCTCAAAGGGT i manLeu1.NW_012106252v1 C 0 I 29 s colAng1.NW_012122154v1 2211883 89 + 4569836 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTGCTGTTTACATTGTTTTCCATAG-TATGTTTGTGATTCTCAAAGGGT i colAng1.NW_012122154v1 C 0 I 24287 s calJac3.chr5_ACFV01180105_random 2291 89 - 12755 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCCACAG-TCTGTTTGGGATTGTCAAAGGGG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881607 89 + 3513951 TGGCCTTCAAAGTTTCCACCAATCAACAGTACTTTTCCTTGTTGCTGTTTACATTGTTTTCCACAG-TCTGTTTGGGATTGTCAAAGGGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17191 89 - 4077172 TGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTATATTGTTTTCCACAG-TCCGTTTGGGATTGTCAAAGGGG i cebCap1.NW_016107543v1 I 6010 C 0 s aotNan1.NW_018505111v1 11020 89 - 94492 TGGCCTCCAAAGTTTCCACCAATCAGTAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTCCACAG-TCCGTTTGGGATTGTCAAAGGGG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22875923 86 + 28711273 GGGCCTCCAAAGTTTGGACCAATGGGTAAAATTTTTCCTTGT---TGTTTCCACTGTTTTGCATGG-TCACTGGGTGAATTATAAAGGAG i otoGar3.GL873537 C 0 I 1 s canFam3.chr9 21503422 82 + 61074082 TCACCCCCAACGTATGGACCAATGGGCAGGACTTCCCT-------TGTTTATACCGTTTTCCATAG-TCACTGGCGGCTGGTAGAAGAGG i canFam3.chr9 I 8 C 0 s dasNov3.JH570468 561715 86 - 852752 -AGGTCTCAATATTTGGACCAATATGCAGTTCTATTCCTTGT---TGTGTATATTGTTTTCCATAGATACAGAGCGAACTGTCAACGAGG i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=16824.000000 s hg38.chr17_JH159148v1_alt 51900 2 + 88070 AA s panTro5.chr17 16368456 2 + 83181570 AA i panTro5.chr17 I 5511 C 0 s panPan2.chr17 16267985 2 + 83442489 AA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114857 2 + 4267968 AA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103280 2 - 2193130 TA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059981 2 - 80997621 TA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133262 2 + 10377808 AA i macNem1.NW_012014910v1 I 16738 C 0 s cerAty1.NW_012006043v1 2007741 1 - 8458610 -A i cerAty1.NW_012006043v1 C 0 I 26078 s chlSab2.chr16 64967093 2 + 75148670 AA i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2236259 2 + 4569836 AA i colAng1.NW_012122154v1 I 24287 C 0 s calJac3.chr5_ACFV01180105_random 2380 2 - 12755 AA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881696 2 + 3513951 AA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17280 2 - 4077172 AA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11109 2 - 94492 AA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876010 2 + 28711273 AA i otoGar3.GL873537 I 1 I 4 s canFam3.chr9 21503504 2 + 61074082 AA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561801 2 - 852752 AA i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2192836 29 + 4244037 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=162158.000000 s hg38.chr17_JH159148v1_alt 51902 37 + 88070 ATTGTTTCTGAAAACTTATGAATCTTTTGAA---AGTAAG s panTro5.chr17 16368458 36 + 83181570 GTTGTTACTGAAATCTTATGAACCTTTT-AA---ACTAAG i panTro5.chr17 C 0 T 5520 s panPan2.chr17 16267987 37 + 83442489 ATTGTTTCTGAAATCTTATGAATCTTTGGAA---AGTAAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114859 35 + 4267968 GT--TTTCTGAAGTCTTATGAATCTTTGGAA---AGTAAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103282 28 - 2193130 GTTGTTTCCTTAAGGTTA--AAC------AG---ATTAA- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28059983 28 - 80997621 GTTGTTTC------CTTAAG-----GTTAAACAGACTAA- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133264 37 + 10377808 GTTGTTTCTGAAATCTTATGAATCTGTTGAA---AGTAAG i macNem1.NW_012014910v1 C 0 T 16748 s cerAty1.NW_012006043v1 2033820 37 - 8458610 GTTCTTTCTTAAAATTTATGAATCTGTTGAA---AGTAAG i cerAty1.NW_012006043v1 I 26078 T 26085 s chlSab2.chr16 64967095 37 + 75148670 GTTCTTTCTTAAAAGTTATGAATATGTTGAA---AGTAAG i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2236261 37 + 4569836 GTTCTTTCTTAAAAGTTATGAATCTGTTGAA---AGTAAG i colAng1.NW_012122154v1 C 0 T 24297 s calJac3.chr5_ACFV01180105_random 2382 37 - 12755 GTTGTTTCTGAACTCTTATGAATCTTTTGAA---ACTAAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881698 37 + 3513951 GTTGTTTCTGAACTCTTATGAATCTTTTGAA---AGTAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17282 37 - 4077172 GTTGTTTCTGAACTCTTATGAATCTTTTGAA---AGTAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11111 37 - 94492 GTTATTTCTGAACTCTTATGAATCTTTTGAA---AGTAAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876016 35 + 28711273 GTTGTAGT--AAGTGTTAAGAATATATCAGA---AGTAAG i otoGar3.GL873537 I 4 I 2 s canFam3.chr9 21503506 34 + 61074082 ---GTTCCCTAAGTGTTAGGAATCCCTAGAG---AATGGG i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 561803 35 - 852752 -TTTTTTCCTGACATTT-TGCTTCTGTTGAA---AATTAG i dasNov3.JH570468 C 0 C 0 e manLeu1.NW_012106252v1 2192836 29 + 4244037 I e rheMac8.chr16 30139106 31425 - 77216781 I a score=3316.000000 s hg38.chr17_JH159148v1_alt 51939 2 + 88070 -GG s panTro5.chr17 16362974 2 + 83181570 -GG i panTro5.chr17 T 5520 C 0 s panPan2.chr17 16268024 2 + 83442489 -GG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114894 2 + 4267968 -GG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103310 2 - 2193130 -GG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28060011 2 - 80997621 -GG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116553 2 + 10377808 -GG i macNem1.NW_012014910v1 T 16748 C 0 s chlSab2.chr16 64967132 2 + 75148670 -GG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192865 2 + 4244037 -GG i manLeu1.NW_012106252v1 I 29 C 0 s colAng1.NW_012122154v1 2212001 2 + 4569836 -GG i colAng1.NW_012122154v1 T 24297 C 0 s calJac3.chr5_ACFV01180105_random 2419 2 - 12755 -GA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881735 2 + 3513951 -GA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17319 2 - 4077172 -GA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11148 2 - 94492 -GA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21503541 1 + 61074082 -G- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 561838 2 - 852752 TG- i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22876051 2 + 28711273 I e cerAty1.NW_012006043v1 2033857 26085 - 8458610 T e rheMac8.chr16 30139106 31425 - 77216781 I a score=1051346.000000 s hg38.chr17_JH159148v1_alt 51941 106 + 88070 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCCTTTCAGATAAAAGGAAGCCCATCTCATCATCAGCATCATTCCTGCTCTGACCATCATCTAGTCA s panTro5.chr17 16362976 106 + 83181570 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGACACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGTTCTGACCATCATCTGGTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268026 106 + 83442489 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCCTTTCAGATAAAAGGATGCCCATCTCATCATCAGCATCATTCCTGCTCTGACCATCATCTAGTCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4114896 106 + 4267968 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCCTTTCAGATAAAAGGAAGCCCATCTCATCATCAGCATCATTCCTGCTCTGACCATCATCTAGTCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103312 106 - 2193130 TTTAATCTCTCTCTTAATTGTGAATTACTCATAGAAACTTTGTTGCAGATAAAAGGAAGCCCATCTCATCATCAGCATCATTCCTGCTCTGACTATCATCTGGTCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28060013 106 - 80997621 TTTAATCTGTTTCTTAATTGTTAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATTTCAACATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116555 106 + 10377808 TTTAATCTGTTTCTTAATTGTTAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATTTCAACATCAGCATCTTTCCTGCTCTGACCATCGTCTGGTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007772 106 - 8458610 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATCTTATCATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCA i cerAty1.NW_012006043v1 T 26085 C 0 s chlSab2.chr16 64967134 106 + 75148670 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCGTTTCAGATAGAAGGAAGCTCCTCTCATCATCGGCATCATTCCTGCTCTGACAATCCTCTGGTCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192867 106 + 4244037 TTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATCTCATCATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2212003 106 + 4569836 TTTAATCTGTTTCTTAATTGTTAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATTTCATCATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 2421 106 - 12755 TTTAATCTGTTTCTTAATTGTGAATTATTCATGGAGATGTTGTTTCAGATAAAAGGAATGAGGTCTCATCATCAGCATCATTCTTGCTCTGACCATCTTCTGGTCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881737 106 + 3513951 TTTAATCTGTTTCTTAATTGTGAATTATTCATGGAATTGTTGTTTCAGATAAAAGGAATGAGGTCTCATCATCAGCATCACTCTTGCTCTGACCATCTTCTGGTCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17321 106 - 4077172 TTTAATCTGTTTCTTAATTGTGAATTATCCATGGAAATGTTGTTTCAGATAAAAGGAATGAGGTCTCATCATCAGCATCATTCTTGCTCTGACCATCATCTTGTCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11150 106 - 94492 TTTAATCTGTTTCTTAATTGTGAATTATTCATGGAAATGTTGTTTCAGATAAAAGGAATGAGGTCTTATCATCAGCATGGTTCCTGCTCTGACCATCTTCTGGTCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876053 105 + 28711273 TTTGATCTGTTTCCTAATTGTGAATAACTCATAGAAACTGT-TTTCAGATAAAAGGAAAGTGATCATATCATCAGCATTGTTCCTGCTCTGGTCGCCACCTGGTCC i otoGar3.GL873537 I 2 C 0 s canFam3.chr9 21503542 102 + 61074082 CTTAACATGTTT--TAATTGAGAGTAACTCATAGGAAGATTGT--CAGAGGGAAGCAAGGTGGTCACGTTAGCAGCCTCGTTCTTGCTTCCGGGGCCGTGGGATCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 561840 100 - 852752 TTTAATCATTTTCCTAATTA--AAGCATTCATAGAATCTT--TTTCAGACTTAAGGACGGCGATCACATCCTCACCATCATTCCTGCCCC-ATCATCATCT-GTCA i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30139106 31425 - 77216781 I a score=209985.000000 s hg38.chr17_JH159148v1_alt 52047 20 + 88070 TGTGAT--AGTTCTTGGTGATC s panTro5.chr17 16363082 20 + 83181570 TGTGAT--AGTTCCTTTTGATC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268132 20 + 83442489 TGTGAT--AGTTCTTGGTGATC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115002 20 + 4267968 TGTGAC--AGTTCTTGGTGATC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103418 20 - 2193130 TGTGAT--AGTTCCTGTTGATC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170531 20 - 77216781 TGTGAT--AGGTCCTGGTAATA i rheMac8.chr16 I 31425 C 0 s macFas5.chr16 28060119 20 - 80997621 TGTGAT--AGTTCCTGGTGATC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116661 20 + 10377808 TATGAT--AGTTCCTGGTGATC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007878 20 - 8458610 TATGAT--AGTTCCTGGTGATC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967240 20 + 75148670 TGTGAT--AGGTCCTGGTAATA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192973 20 + 4244037 TATGAT--AGTTCCTGGTGATC i manLeu1.NW_012106252v1 C 0 I 26417 s colAng1.NW_012122154v1 2212109 20 + 4569836 TATGAT--AGTTCCTGGTGATC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 2527 20 - 12755 TGTGAT--CATTCCTAGTGACC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881843 20 + 3513951 TGTGAT--CATTCCTGGTGACC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17427 20 - 4077172 TGTGAT--AGTTCCGGGTGACC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11256 20 - 94492 TGTGAT--CATTCCTGGTGACC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876158 20 + 28711273 TGTGAT--AATTCCTACTGGCC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503644 22 + 61074082 CGTGATGCAGTTCCTGGGAAGT i canFam3.chr9 C 0 I 4 s dasNov3.JH570468 561940 20 - 852752 TGTGAT--AGTTCCCGCTGGCC i dasNov3.JH570468 C 0 C 0 a score=1064836.000000 s hg38.chr17_JH159148v1_alt 52067 107 + 88070 --TGGGAAGCTCAG-GAAATTCTCTCTGCCCAGCCTCAC--AGTTG-GCTGTATGTAGACTGGGAAGTGTCTGTGGGGAGA----AGCATGATGCTGATATATTTACGGTGACAAAA s panTro5.chr17 16363102 107 + 83181570 --TGGGAGGCTCAG-GAAGTTCTCTCTGTCCAGCCTCGT--GGCTG-GCTGTATGTAGACTGGGAAGTGTCTGTGGGGAGA----AGCATGATGCTGATATATTTACAGTGAGAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268152 107 + 83442489 --TGGGAAGCTCAG-GAAGTTCTCTCTGCCCAGCCTCAC--GGTTG-GCTGTATGTAGACTTGGAAGTGTCTGCGGGGAGA----AGCATGATGCTGATATATTTACGGTGACAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115022 107 + 4267968 --TGGGAAGCTCAG-GAAGTTCTCTCTGCCCAGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAGTGTCTGTGGGGAGA----AGCATGATGCTGATATATTTACGGTGACAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103438 107 - 2193130 --TGGGAGGCTCAG-GAAGTTCTCTCTGCCCAGCCTCAT--GGTTG-GCTGTATGTAGCCTGGGAAGTGTCTGTGGGGAGA----AGCATGATGCTGATATATTTACAGTGACAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170551 107 - 77216781 --TGGGAGACTCAC-GTACTTCTTTCTGCCCAGCCTCAC--GGTTG-GCTGAATGTGGTCTGAGAAGTGCCTGTGGGGAGA----AGTATGATGTTGATAAATTTATGGTGACAAAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28060139 107 - 80997621 --CGGGAGGCTCAG-GAAGTTCTCTCTGCCCAGCCTCAT--AGTTG-GCTGTATGTAGACTGGGAAGCGTCTGTGGGGAGA----AGCATGATGCTGATATATTTATGGTGACAAAA i macFas5.chr16 C 0 M 801 s macNem1.NW_012014910v1 2116681 107 + 10377808 --TGGGAGGCTCAG-GAAGTTCTCTCTGCCCAGTCTCAT--AGTTG-GCTGTATGTAGACTGGGAAGTGTCTGTGAGGAGA----AGCATGATGCTGATATATTTATGGTGACAAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2007898 107 - 8458610 --CAGGAGGCTCAG-GAAGTTCTCTCTGCCCAGCCTCAT--AGTTA-GCTGTATGTAGACTGGGAAGTGTTTGTGAGGAGA----AGCATGATGCTGATATATTTATGGTGACAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967260 107 + 75148670 --TGGGAGACTCAC-GTACTTCTCTCTGCCCAGCCTCAC--GGTTG-GCTGAATGTGGTCTGAGAAGTGCCTGTGGGGACA----AGTATGATGTAGATAAATTTATGGTGACAAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219410 107 + 4244037 --CGGGAGGCTCAG-GAAGTTCTCTCTGCCCAGTCTCAT--GGTTG-TCTGTATGTGTCATGGGAAGTGTCTGTGGGGAGA----AGCATGATGCTGATCTACTTACCGTGACAAAA i manLeu1.NW_012106252v1 I 26417 C 0 s colAng1.NW_012122154v1 2212129 107 + 4569836 --CGGGAGGCTCAG-GAAGTTCTCTCTGCCCAGCGTCAT--AGTTG-GCTGTATGTAGACTGGGAAGTGTCTGTGAGGAGA----AGCATGATGCTGATATGTTTATAGTGACAAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 2547 106 - 12755 --AGGGAGGCTCAT-GAAGTTCTCTT-GCCCAGCCTCAC--GTTTG-GCTGTGTGTAGGCTGGGCAGTGTCTTTGGGGAGA----AGCATGATCCCGATATATTTACAGTGACAAAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881863 106 + 3513951 --AGGAATACTCAT-GAAGTTCTCTC-GCCCAGCCTCAT--GTTTG-GCTGTGTGTAGACTGGGGAGTGTCTGTGGGGAGA----AGCATGATGCCGATATATTTACAGTGACAAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17447 106 - 4077172 --AGGAAGGCTCAT-GAAGTTCTCTC-GCCCAGCCTCAC--GTTTG-GCTGTGTGTAGACTGGGCAGTGTCAGTGGGGAGA----AGCACGATGCCATTATATTTACAGGGACAAAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11276 106 - 94492 --AGGGAGGCTCAG-GAGGTTCTCTC-GCCCAGCCCCAT--GTTTG-GCTGTGTGTAGACTGAGCAGTGTCTGTGGGGAGA----AGCATGATGCCGATATATTTACAGTGACAAAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876178 108 + 28711273 --TGGGAGGGTTCC-AAAGTTCTCTCTGCTCACCCTATT--ACTTGTGTTGTATGTAGATTAGGAAGGGTCTATGGGGAGT----GGTGAGGTGCTGATATGTGCATGTTGTTGAAT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21503670 111 + 61074082 ----GGTGAGTCAGTTTCGTGCTCCTTGCCCAGCATTGGTAGTTTG-GCTGCATGCAGACTGGG-AGTATCCCTGAGGTGAAGGGAGCTTGATGGTTATATGTTCATAGTGATGAAT i canFam3.chr9 I 4 C 0 s dasNov3.JH570468 561960 110 - 852752 TGGGGAGGGTCCTT-ACAGTTGTTGGTCCCCAACTTTGTTCCTTTG-GCTGTAC-TAGATTGGCAAGTACACCTAGGGGCA----TGCATGATACTGATACAACCCCAGGGACAAAT i dasNov3.JH570468 C 0 C 0 a score=2292941.000000 s hg38.chr17_JH159148v1_alt 52174 271 + 88070 TGAATCCATGCCTGGGCCCAAGACAATTCACCCACCAAAT-TCTGACTCAAGA--CT--AACAGGCA----TCT--CT----GTGCAATCCTCA---CCACCTGTGTCTTTCAGTTATTTGAACGTCACTTGGGAAGAGGGTGTCTGTCACAGTGTGTTCC----ATGTGGCAGAGCCGATCGAGAGCAGGTGGATGC--AGAG------A-----AATCCACTGGGATTTAGACAGCATCAAGCAATCTACGCCCAGGGGTGAGCATTCAT-----TCTCACTTGTCTGCGAGTGTGGGGATTACCGGGA s panTro5.chr17 16363209 269 + 83181570 TGAATCCATGCCTGGGCCAAAGACTAGTCACCCACCAAAT-TCTGACTCAAGA--CT--AACAGGCA--TCTCT--CT----GTGCAACCCTCA---CCACC--TGTCTTTCAGTTCTTTGAACGTCACTTGGGAAGAGGGTGTTTGTCACAGTGTGTTCC----ATGTGGCAGAGCAGATCGAGAGCAGGTGGGTGC--AGAT------T-----AATCCACTGGGATTTAGACAGCATCAAGTAATCTATGCCC-TGAGTGACCATTCAT-----TCTGACTTGTCTGTGAGCGTGGCGATT-CCAGGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268259 273 + 83442489 TGAATCCATGCCTGGGCCCAAGACAATTCACTCACCAAAT-TCTGACTCAAGA--CT--AACAGGCA--TCTCT--CT----GTGCAATCCTCA---CCACCTGTGTCTTTCAGTTATTTGAACGTCACTTGGGAAGAGGGTGTCTGTCACAGTGTGTTCC----ATGTGGCAGAGCAGATCGAGAGCAGGTGGATGC--AGAG------A-----AATCCACTGGGATTTAGGCAGCATCAAGCAATCTACGCCCAGGGGTGAGCATTCAT-----TCTCACTTGTCTGCGAGTGTGGGGATTACCGGGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115129 273 + 4267968 TGAATCCATGCCTGGGCCGAAGACAATTCACCCACCAAAT-TCTGACTCAAGA--CT--AACTGGCA--TCTCT--CT----GTGCAATCCTCA---CCACCTGTGTCTTTCAGTTATTTGAACGTCACTTGGGAAGCGGGTGTTTGTCACAGTGTGTTCC----ATGTGGCAGAGCAGATCGAGAGCAGGTGGATGC--AGAA------A-----AATCCACTGGGATTTAGACAGCATCAAGCAATCTACGCCCAGGGGTGACCATTCAT-----TCTCACTTGTCTGCAAGTGTGGGGATTACCGGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103545 267 - 2193130 TGAATCCATGCCTGGGCCCAAGACTAGTCACCCACCAAAT-TCTGACTCAAGA--CT--AACAGGCA--TCTCT--CT----GTGCAACCCTCA---CTACCTGTGCCTTTCAGTTCTTTGAACATCAC-----AAGAGGGTGTCTGTCACAGTGTATTCC----ATGTGGCAGAGCAGATCGAGAGCAGATGGATGC--AGAG------A-----AATTCACTGGGATTTAGACAACATCAAGCAATCTATGCCC-TGAGTGACCATTCAT-----TCTGCCTTGTCTGCGAGTGTGGTGATCACCAGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170658 275 - 77216781 TGAATCCATTCCTGGGCCCAAGACTATTCACCCACCAAAT-TCTGATTGAAGA--CT--AATAGGTATCTCTCT--CT----GTGCAACCCTGA---CCACCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGAGAGTATCTGGCAGAGTGTGTTCC----ATGTGGCAGAGCAGATTGAGAGCAAGTGGATGC--AGAG------A-----ATTCCACTGGGATTTAGAGAGCATAAAGCAATGTATGCCCTGGGGCGACCAGTCAT-----TCTGACTTACCTGTGAGTGTGGTGATTACCAGGA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116788 272 + 10377808 TGAATCCATGCCTGGGCCCAAGACTATTCACCCACCAAAT-TCTGATTCAAGA--CT--AACAGGCA--TCTCT--CT----ATGCAACCCACA---CCACCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGAGGGTGTCTGGCAGAGTGTGTTCC----ATGTGGCAGAGCAGATTGAGAGCAGGTGGATGC--AGAG------A-----AGTCCACTGGGATTTAGACAGCATCAAGCAATCTACGCCCT-GAGTGACCAGTCAT-----TCTGATTTGTCTGCGAGTGTGGCGATTACCAGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2008005 272 - 8458610 TGAATCCATGCCTGGGCCCAAGACTATTCACCCACCAAAT-TCTGATTCAAGA--CT--AACAGGCA--TCTCT--CT----GTGCAACCCACA---CCATCTGTGTCTTTCAGTTCTTTGAAGGTCACTTGGGAAGAGGGTGTCTGGCAGAGTGTGTTCC----ATGTGGCAGAGCAGATTGAGAGCAGGTGGATGC--AGAG------A-----AATCCACTGGAATTTAGACAGCATCGAGCAATCTATGCCCT-CAGTGACCAGTCAT-----TCTGACTTGTCTGCGAGTGTGGCGATTACCAGGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967367 273 + 75148670 TGAATCCATTCCTGGGCCCAAGACTATTCACCCATCAAAT-TCTGATTGAAGA--CT--AATAGGTA--TCTCT--CT----GTGCAACCCACA---CCACCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGAGGGTGTCTGGCAGAGTGTATTCC----ATGTGGCAGAGCAGATTGAGAGCAAGTGGATGC--AGAG------A-----ATTCCACTGGGATTTAGAGAGCATAAAGCAATCTATCCCCTGGGGCGACCATTCGT-----TCTGACTTACCTGTGAGTGTGGTGATTACCAGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219517 273 + 4244037 GGAATCCATGCCTGGACCCAAGACTATTCACCCACCAAAT-TCTAGCTCAAGA--CT--AACAGGCA--TCTCC--CT----GTGCGCCCCTCA---CCATCTGTGTCTTTCAGTTCTTTGAACATCACTTGGGAAGAGGGTGTCTGGCAGAGTGTGTTCC----ATGTGGCAGAGCAGATCGAGAGCAAGTGGATGC--AGGG------A-----AATCCACTGGGATTTTGACAGCGTCGAGCAATCTAAGCCTGTGCGTGACTATTCAT-----TCTGACTTGTCTGTGAGTGTGGCGATTACCGGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2212236 275 + 4569836 TGAATCCATGCCTGGGTCCAAGACTATTCACCCACCAAAT-TCTGATTCAAGA--CT--AACAGGCA--TCTCT--CT----GTGCAACCCACACTCCCACCTGTGTCTTTCAGTTCTTTGCATGTCACTTGGGAAGAGGGTGTCTGGTAGAGTGTGTTCC----ATGTGGCAGAGCAGATGGAGAGCAGGTGGATGC--AGAG------A-----AATCCACTGGGATTTAGACAGCATCAAGCAATCTATGCCCT-GAGTAACCAGTCAT-----TCTGATTTGTCTGTGAGTGTGGCGATTACCAGGA i colAng1.NW_012122154v1 C 0 I 6273 s calJac3.chr5_ACFV01180105_random 2653 277 - 12755 TGAGTCCATGCCTGGGCCCAAGACTATTCACCAACAAAAT-TCTAATTCAAGA--CT--AACATGCA--TCTCT--C------TGCAACCTATA---CCACCTGTGTCTTTTGATTCTGTGAACGTCACTTGGGAAGAGGGTGCCTGGCACAGTGTGTTCCATGCACGTGGCAGAGCTGATCAAGCGTAGGTGGATGCAAAGAG------A-----AATCCACTGGGATTTTGGCAGTATTAAGCCATCTATGCCCTGgggtgaccattcat-----tctgacttgtctgggagtgtggggattaccagaa i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1881969 273 + 3513951 TGAATCCATGCCTGGGCCCAAGACTATTCACCAACCAAAT-TCTAATTCAAGA--CT--AGCAGGCA--TCTCT--C------TGCAACCTATA---CCACCTGTGTTTTTCGGTTCTGTGAACGTCACTTGGGAA----ATGTCTGGCACAGTGTGTTCCATGCATGTGGCAGAGCCAATCGAGCGTAGGTGGATGCAAAGAG------A-----AATCCACTGGGATTTTGGCAGCATCAAGCAATCTATGCCCTGGGGTGACCACTCAT-----TCTGACTTGTCTGCGAGTGTGGGGATTACCAGAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17553 277 - 4077172 TGAATCCATGCCTGGGCCCAAGACTATTCACCAGCCAAAT-TCTAATTCAAGA--CT--AACAGGCA--TCTCT--C------TGCAACCTATA---CCACCCGTGTCTTTGGATTCTGTGAACGTCACTTGGGAAGAGGGTGCCTGGCACAGTGTGTTCCCTGTATGTGGCAGGGTCGATCGAGCGTAGGTGGATGCAAAGAG------A-----AATCCACTGGGATTTTGGCAGCATCAAGCAATCTATGCCCTGGGGTGACCATTCAT-----TCTGACTTGTCTGCCAGTGTGGGGATTACCAGAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11382 277 - 94492 TTAATCCATGCCTGGGCCCAACACTATTCACCAACCAAAT-TCTAATTCAAGA--CT--AACAGGCA--TCTCT--C------TGCAACCTATA---CCACCTGTGTCTTTCGGTTCTGTGAACGTCACTTGGGAAGAGGGTGCCTGGCACAGTGTGTTCCATGCATGTGGCAGAGCCGATCGAGCATAGGTGGATGCAAAGAG------A-----AATCCACTGGGATTTTGGCAGCATCAAGCAATCTATGCCCCGGGGTGACCATTCAT-----TCTGATTTGTCTGCGAGTGTGGCGATTACCAGAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876286 254 + 28711273 TAAATCCATGCTTTGGTCTAAGTTCATTCACTTGCAAAAG-CCAGAACCAACA--CT--AACAGGCA--TCTCTTCCT----GTACAACCTACT---GCAGGGGTGTCTCCCAGTTCTATCCATGACACTTGGGAAGAGGATGTTT-TTATAATTTGCTCC----ATGTGGCAGAG---AACCAAAGCAGATAGACAG--AAGG------ATAAGTAGTACACCGGCAATAAGAACGTATCA----------GTTTGTgggtga-cattcac-----tttgatttgcctg---gtgt--------ccaaag i otoGar3.GL873537 C 0 I 1 s canFam3.chr9 21503781 272 + 61074082 TGCAATCATGCTGGAGCCCGAGTCTGTTTCCCCA--AAGTGCCTCATTCCAGAGGCC--CGCAGGCA--TCTGT--CTCTTGGAGCACCCTACC---TCGTTTGCATAGGGCAGTGCATTCAAAGAAACTTGGGTGGAGGACATCTGGCATCATGTCTTCC----ATATGTCAAGGCCGAATC-GAGCAGGTGGATAG--AAAC------A--------------GGACTAAACCAGCATCCATGAACATACTTCCT-GAGTGACCAGCAGTCCTGCTCTGATTTACCCAGAAATGAGTGTTTTCCCAGGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 562070 277 - 852752 TGGCTCCCTGCCTTTGTCCAAGACTTTTCACCAAATGAAG-CCTCATTCAAGA--CTGCAACAAGAA--TTTAT--CT-------TACTCTGTG---GCAAATTTAGTCTACCATTCTATGAAAGATATTTTGGTAGAAGATGCTTGGCATACTCCTTTC-----ATATGGCAAAACAGAAGTAAAGCAGGTGGATAG--AAGGGAGCATA-----ATTATACTGTGATTCAGAAGGTATCAGTCAATTTACATCTTGATgtgacaaaccat-----cttggtttgcccaaagctgtggggcttccccgga i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28060246 801 - 80997621 M a score=700701.000000 s hg38.chr17_JH159148v1_alt 52445 91 + 88070 TGAGAATGTAGAACTTTCTA-TGACATAACTGCTTGAGATTCAGGCCAACGTGCATAAGCTG-TG-GCTCTAGCCATAACCCTGGTTACTAGCA s panTro5.chr17 16363478 90 + 83181570 TGAGAATGTAGGACTCTCTA-TGGCATAACTGCTTGAGATTCAGGCCAACCAGCATGTGCTT-TG-GCTCTAGCCGCAACCC-GGTTACTAGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268532 91 + 83442489 TGAGAATGTAGAACTTTCTA-TGACATAACTGCTTGAGATTCAGGCCAATGTGCATAAGCTG-TG-GCTCTAGCCATAACCCTGGTTACTAGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115402 91 + 4267968 TGAGAATGTAGAACTTTCTA-TGACATAACTGCTTGAGATTGAGGCCAACGTGCATAAGCTG-TG-GCTCTAGCCATAACCCTGGTTACTAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103812 90 - 2193130 CGAGAATGTAGAACTCTCTA-TGGCATTACTGCTCGAGATTCAGGCCGACCAGCATGTGCTG-TG-GCTCTAGACGCAACCC-GGTTACTAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170933 91 - 77216781 TGAGAATGTAGGACTTTCTA-TCACATAACTGGTTGAGATTCAGACCAACCAGCATGTGCTG-TG-GCTCTAGCCTTAAACCTAGTTACTAGCA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2117060 90 + 10377808 CGAGAATGTAGGGCTTTCTA-TGACATAACTGATTGAGATTCAGGCCAACCAGCATGCACTC-TG-GCTCTAG-CTGCAACCCAGTTACTAGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2008277 91 - 8458610 TGAGAGTGTAGAACTTTCTG-TGACATAACTGCTTGAGATTCAGGCCAATGAGCACGAGCTA-TG-GCTCTAGCCATAACCCTGGTTACTAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967640 91 + 75148670 TGAGAATGTAGGACTTTCTA-TCACGTAACTGGTTGAGATTCAGACCAACCAGCATGTGCTG-TG-GCTCTAGCCTTAAACCTAGTTACTAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219790 91 + 4244037 TGATAATGGAGGACTTTCTA-TCACATAACTGCTTGAGATTCAGGGCAACGAGTATGAGCTG-TG-CTTCTAGCCTTAAAACTAGTGACTAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218784 90 + 4569836 CGAGAATGTAGGACTTTCTA-TGACATAACTGACTGAGATTCAGGCCAACCAGCATACGCTC-TG-GCTCTAGCCAC-AACCCGGTTACTAGCA i colAng1.NW_012122154v1 I 6273 C 0 s calJac3.chr5_ACFV01180105_random 2930 91 - 12755 tgagaatgtagcactttcta-tgacataaccgctttagtttcaggccaaccagcatgagctg-TG-GTTCTGGCCCTAACCCTGGTTACTAGCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882242 90 + 3513951 TGAGAATGTAGCACTTTCTA-TGACATAATTGCTTTAGATTCAGGCCAACCAGCATGAGCTG-TG-GTTCTAGCCCTAACCCTGGTTACTA-CA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17830 91 - 4077172 TGAGAATGCAGCACTTTCTA-TGACATAACTGCTTTAGATTCAGGCCAACCGGCATGAGCTG-TG-GTTCTAGCCCTAACCCTGGTTACTGGCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11659 91 - 94492 TGAGAATGTAGCACCTTCTA-TGACATAACTGCTTTAGATTCAGGTCAACCAGCATGAGCCG-TG-GTTCTAGCCCTAACCCTGGTTACTAGCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876541 92 + 28711273 ggaaaacgtgtgagtttctg-tgatatgactgccatagatccaggcaaaccaggatgagctgatt-acactaTGTCTAACCCTGGGTACCAACA i otoGar3.GL873537 I 1 C 0 s canFam3.chr9 21504053 65 + 61074082 ------TGTGGG------------TATAAGCGGGGCATTTTGGGGTGAGTCGG----------TG-ACCCTCGTCCTAACCTTGTTAACCAGCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 562347 86 - 852752 ------cgtgtgatttttcagtgctaatgctgggacagtttctggcaaactgg-acaagttg-aacactcCagtcctaaccctgtttactagca i dasNov3.JH570468 C 0 I 27781 e macFas5.chr16 28060246 801 - 80997621 M a score=11339.000000 s hg38.chr17_JH159148v1_alt 52536 2 + 88070 CA s panTro5.chr17 16363568 2 + 83181570 CA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268623 2 + 83442489 CA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115493 2 + 4267968 CA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103902 2 - 2193130 CA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171024 2 - 77216781 CA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2117150 2 + 10377808 CA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2008368 2 - 8458610 TG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967731 2 + 75148670 CA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219881 2 + 4244037 AA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218874 2 + 4569836 CA i colAng1.NW_012122154v1 C 0 T 5961 s calJac3.chr5_ACFV01180105_random 3021 2 - 12755 CA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882332 2 + 3513951 CA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17921 2 - 4077172 TA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11750 2 - 94492 CA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876633 2 + 28711273 GA i otoGar3.GL873537 C 0 I 7 s canFam3.chr9 21504118 2 + 61074082 GA i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 562433 27781 - 852752 I e macFas5.chr16 28060246 801 - 80997621 M a score=22208.000000 s hg38.chr17_JH159148v1_alt 52538 5 + 88070 GTCAG s panTro5.chr17 16363570 5 + 83181570 GTAAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268625 5 + 83442489 GTCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115495 5 + 4267968 GCCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103904 5 - 2193130 GTGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171026 5 - 77216781 GTAAG i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2117152 5 + 10377808 GTAAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2008370 5 - 8458610 TTCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64967733 5 + 75148670 GTTAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219883 5 + 4244037 GTAAG i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3023 5 - 12755 GGTAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882334 5 + 3513951 GTTAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17923 5 - 4077172 GGAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11752 5 - 94492 GGTAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876642 5 + 28711273 ACTAA i otoGar3.GL873537 I 7 C 0 s canFam3.chr9 21504120 5 + 61074082 GTGAG i canFam3.chr9 C 0 I 15749 e dasNov3.JH570468 562433 27781 - 852752 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e macFas5.chr16 28060246 801 - 80997621 M a score=82804.000000 s hg38.chr17_JH159148v1_alt 52543 13 + 88070 TATCAt------ttcttct s panTro5.chr17 16363575 13 + 83181570 CAGCAT------GTCTTCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268630 13 + 83442489 TATCAt------ttcttct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115500 13 + 4267968 TATCAt------ttcttct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103909 13 - 2193130 CATCAT------GTCTTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171031 13 - 77216781 CGTCAT------TTCTTCT i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2117157 13 + 10377808 CATTAT------GTCTTCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2008375 13 - 8458610 TGTCGt------ttcttct i cerAty1.NW_012006043v1 C 0 I 115 s chlSab2.chr16 64967738 13 + 75148670 CGTCAT------CTCTTCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219888 13 + 4244037 CATCAT------TTCTTCT i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3028 13 - 12755 TGTCAT------TTCTTCT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882339 13 + 3513951 TGTTAT------GTCTTCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17928 13 - 4077172 TGTTAT------TTCTTCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11757 13 - 94492 TGTCAT------TTCTTCT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876647 19 + 28711273 TGTCACTGGttatttttct i otoGar3.GL873537 C 0 C 0 e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e macFas5.chr16 28060246 801 - 80997621 M a score=14599.000000 s hg38.chr17_JH159148v1_alt 52556 2 + 88070 ct s panTro5.chr17 16363588 2 + 83181570 CT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268643 2 + 83442489 ct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115513 2 + 4267968 ct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103922 2 - 2193130 CT i nomLeu3.chrUn_GL397460_1 C 0 I 6 s rheMac8.chr16 30171044 2 - 77216781 CT i rheMac8.chr16 C 0 T 4005 s macNem1.NW_012014910v1 2117170 2 + 10377808 CT i macNem1.NW_012014910v1 C 0 I 10598 s chlSab2.chr16 64967751 2 + 75148670 CT i chlSab2.chr16 C 0 T 19227 s manLeu1.NW_012106252v1 2219901 2 + 4244037 CT i manLeu1.NW_012106252v1 C 0 T 14555 s calJac3.chr5_ACFV01180105_random 3041 2 - 12755 CT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882352 2 + 3513951 CT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17941 2 - 4077172 CT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11770 2 - 94492 CT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876666 2 + 28711273 ca i otoGar3.GL873537 C 0 C 0 e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e cerAty1.NW_012006043v1 2008388 115 - 8458610 I e macFas5.chr16 28060246 801 - 80997621 M a score=7802.000000 s hg38.chr17_JH159148v1_alt 52558 3 + 88070 ttc s panTro5.chr17 16363590 3 + 83181570 CTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268645 3 + 83442489 ttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115515 3 + 4267968 ttc i gorGor5.CYUI01015385v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3043 3 - 12755 CTC i calJac3.chr5_ACFV01180105_random C 0 I 6 s saiBol1.JH378271 1882354 3 + 3513951 CTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17943 3 - 4077172 CTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11772 3 - 94492 CTC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876668 3 + 28711273 ttc i otoGar3.GL873537 C 0 C 0 e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e chlSab2.chr16 64967753 19227 + 75148670 T e cerAty1.NW_012006043v1 2008388 115 - 8458610 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I a score=8704.000000 s hg38.chr17_JH159148v1_alt 52561 4 + 88070 tttc s panTro5.chr17 16363593 4 + 83181570 TCTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268648 4 + 83442489 tttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115518 4 + 4267968 tttc i gorGor5.CYUI01015385v1 C 0 C 0 s saiBol1.JH378271 1882357 4 + 3513951 TCTC i saiBol1.JH378271 C 0 I 6 s cebCap1.NW_016107543v1 17946 4 - 4077172 TCTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11775 4 - 94492 TCTC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22876671 4 + 28711273 tctc i otoGar3.GL873537 C 0 C 0 e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e chlSab2.chr16 64967753 19227 + 75148670 T e cerAty1.NW_012006043v1 2008388 115 - 8458610 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I a score=1911.000000 s hg38.chr17_JH159148v1_alt 52565 1 + 88070 t s panTro5.chr17 16363597 1 + 83181570 T i panTro5.chr17 C 0 I 2 s panPan2.chr17 16268652 1 + 83442489 t i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115522 1 + 4267968 t i gorGor5.CYUI01015385v1 C 0 C 0 s cebCap1.NW_016107543v1 17950 1 - 4077172 T i cebCap1.NW_016107543v1 C 0 I 995 s aotNan1.NW_018505111v1 11779 1 - 94492 T i aotNan1.NW_018505111v1 C 0 I 1019 s otoGar3.GL873537 22876675 1 + 28711273 t i otoGar3.GL873537 C 0 C 0 e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e chlSab2.chr16 64967753 19227 + 75148670 T e cerAty1.NW_012006043v1 2008388 115 - 8458610 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I a score=945.000000 s hg38.chr17_JH159148v1_alt 52566 9 + 88070 tagacggag s panPan2.chr17 16268653 9 + 83442489 tagacggag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115523 9 + 4267968 tagacggag i gorGor5.CYUI01015385v1 C 0 C 0 s otoGar3.GL873537 22876676 1 + 28711273 t-------- i otoGar3.GL873537 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e chlSab2.chr16 64967753 19227 + 75148670 T e cerAty1.NW_012006043v1 2008388 115 - 8458610 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I e panTro5.chr17 16363598 2 + 83181570 I a score=4259.000000 s hg38.chr17_JH159148v1_alt 52575 5 + 88070 tcttt s panPan2.chr17 16268662 5 + 83442489 tcttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115532 5 + 4267968 tcttt i gorGor5.CYUI01015385v1 C 0 C 0 s cerAty1.NW_012006043v1 2008503 5 - 8458610 tcttg i cerAty1.NW_012006043v1 I 115 C 0 s chlSab2.chr16 64948526 5 + 75148670 tcttg i chlSab2.chr16 T 19227 C 0 s otoGar3.GL873537 22876677 5 + 28711273 tattt i otoGar3.GL873537 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e colAng1.NW_012122154v1 2218876 5961 + 4569836 T e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I e panTro5.chr17 16363598 2 + 83181570 I a score=12063.000000 s hg38.chr17_JH159148v1_alt 52580 7 + 88070 ctctgtc s panPan2.chr17 16268667 7 + 83442489 ctctgtc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115537 7 + 4267968 ctctgtt i gorGor5.CYUI01015385v1 C 0 C 0 s cerAty1.NW_012006043v1 2008508 7 - 8458610 ctctgtc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948531 7 + 75148670 ctctgtc i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2212915 7 + 4569836 ctctgtc i colAng1.NW_012122154v1 T 5961 C 0 s otoGar3.GL873537 22876682 7 + 28711273 ctctttc i otoGar3.GL873537 C 0 T 14972 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I e panTro5.chr17 16363598 2 + 83181570 I a score=247155.000000 s hg38.chr17_JH159148v1_alt 52587 182 + 88070 gcctagactggagtgcagtggcgtgatctcggctcactgcaacgtctgattcctcgattcaggggattcacctgcctcagcctcccgagtagctgccactacagatgccggccaccatgcccggctaatttttg-----------------tatttttagtag----agagagggttt--------cacc--atatttgtcaggctggtctcg s panPan2.chr17 16268674 182 + 83442489 gcctaggctggagtgcagtggcgtgatctcggctcactgcaacgtctgattccttggttcaagggattcacctgcctcagcctcccgagtagctgcgactacagatgccggccaccatgcccggctaatttttg-----------------tatttttagtag----agagagggttt--------cacc--atatttgtcaggctggtctcg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115544 182 + 4267968 gcctaggctggagtgcagtggtgtgatctcggctcactgcaacgtctgattcctccgttcaagggattcacctgcctcagcctcccgagtagctgcgactacagatgccggccaccatgcccggctattttttg-----------------tatttttagtag----acagagggttt--------cacc--atatttgtcaggctggtctcg i gorGor5.CYUI01015385v1 C 0 C 0 s cerAty1.NW_012006043v1 2008515 182 - 8458610 gcccaggctgaagtgcagtgttgtgaactcggctcactgcaacctccacctcccgggttcaagggattctcctgcctcagcctcccgagtagctgggactacaggttcccgccaccatgcctggcttatttttt-----------------tatttttagtag----agagagggttt--------cacc--aaatttgtcaggctggtttca i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948538 182 + 75148670 gcccaggctgaagtacagtggtgtgaactcggctcactgcaacctctgcatcccgggttcaaggggttctcctgcctcagactcctgagtagctgggactacaggtgcccgccaccatgcctggctaatttttt-----------------tatttttagtag----agagagggttt--------cacc--aaatttgtcaggctggtttca i chlSab2.chr16 C 0 C 0 s colAng1.NW_012122154v1 2212922 182 + 4569836 gcccaggctgaagcgcagtggtgtgaactcggctcactgcaacctccgcctcccgggttcaagggattctcttgcctcagcctcccaagtagctgagactacaggtgtccgccaccatgcctggctaatttttt-----------------tatttttagtag----agagagggttt--------cacc--aaatttatcaggctggtttca i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 5760901 206 - 28711273 cccttgggtagagtgccatggc---atcacagctcacagcaacatccaactcctgggctcaagcgagtttcctgcctcagcctcccaagtagctgagaccacaggcacccgccacaatgcccagttattttttggttgcagctgtcattgttgtttttggtgggcctgggctggatttgaacccgccaccttaggtgtatgtggctggc---- i otoGar3.GL873537 n 14972 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e manLeu1.NW_012106252v1 2219903 14555 + 4244037 T e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I e panTro5.chr17 16363598 2 + 83181570 I a score=144666.000000 s hg38.chr17_JH159148v1_alt 52769 75 + 88070 aactcctgaccttgtgagctgcctg------------------cctcggcctcccaaagtgctgatattacaggcatgagccaccatccacag s panPan2.chr17 16268856 75 + 83442489 aactcctgaccttgtgagctgcctg------------------cctcggcctcccaaaatgctgatattacaggcatgagccaccATCCACAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115726 75 + 4267968 aactcctgaccttgtgagctgcccg------------------ccttggcctcccaaagtgctgatattacaggcgtgagccaccatccacag i gorGor5.CYUI01015385v1 C 0 C 0 s cerAty1.NW_012006043v1 2008697 75 - 8458610 aactcctgacattgtgagctgcctg------------------cctcggcctcccaaagtgctgatattacaagcgtgagccaccgtacacag i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948720 75 + 75148670 aactcctgacattgtgagctgcctg------------------ccctggcctcccaaagtgctgatgttacaggcgtgagccaccgtgcacag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205348 75 + 4244037 AActcctgacattgtgagctgcctg------------------cctcggcctcccaaagtgctgatattacaggcgtgagccaccgtgcacag i manLeu1.NW_012106252v1 T 14555 C 0 s colAng1.NW_012122154v1 2213104 75 + 4569836 aactcctgacattgtgagctgcctg------------------cctcggcctcccaaagtgctgatattacaggcgtgagccaccgtgcacag i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 5761107 91 - 28711273 --accttagccacttgagccacaggNNNNNNNNNNNNNNNNNNNNtcagcctcccaagtagctgggaccacaggcacctgccacaatgcccag i otoGar3.GL873537 C 0 n 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I e panTro5.chr17 16363598 2 + 83181570 I a score=10067.000000 s hg38.chr17_JH159148v1_alt 52844 7 + 88070 ccTCTCC s panPan2.chr17 16268931 7 + 83442489 CCTCTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115801 7 + 4267968 ccTCTCC i gorGor5.CYUI01015385v1 C 0 C 0 s cerAty1.NW_012006043v1 2008772 7 - 8458610 ccTTTAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948795 7 + 75148670 ccTTTAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205423 7 + 4244037 ccTTTAT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213179 7 + 4569836 ccTTTAT i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22861717 7 + 28711273 tctcttt i otoGar3.GL873537 T 14972 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T e nomLeu3.chrUn_GL397460_1 2103924 6 - 2193130 I e panTro5.chr17 16363598 2 + 83181570 I a score=4095.000000 s hg38.chr17_JH159148v1_alt 52851 1 + 88070 T s panTro5.chr17 16363600 1 + 83181570 T i panTro5.chr17 I 2 C 0 s panPan2.chr17 16268938 1 + 83442489 T i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115808 1 + 4267968 T i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103930 1 - 2193130 T i nomLeu3.chrUn_GL397460_1 I 6 C 0 s cerAty1.NW_012006043v1 2008779 1 - 8458610 T i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948802 1 + 75148670 T i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205430 1 + 4244037 T i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213186 1 + 4569836 T i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22861724 1 + 28711273 t i otoGar3.GL873537 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e saiBol1.JH378271 1882361 6 + 3513951 I e calJac3.chr5_ACFV01180105_random 3046 6 - 12755 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T a score=54830.000000 s hg38.chr17_JH159148v1_alt 52852 15 + 88070 TCTATTTAATGAATT s panTro5.chr17 16363601 15 + 83181570 TCTTTTTAATGAAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268939 15 + 83442489 TCTATTTAATGAATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115809 15 + 4267968 TCTATTTAATGAATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103931 15 - 2193130 TCTTTGTAATGAAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2008780 15 - 8458610 TCCATTTAATGAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948803 15 + 75148670 TCCATTTAATGAAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205431 15 + 4244037 TCCATTTAATGAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213187 15 + 4569836 TCCATTTAATGAAGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3052 15 - 12755 TCCTTTGAATGGAGG i calJac3.chr5_ACFV01180105_random I 6 C 0 s saiBol1.JH378271 1882367 15 + 3513951 TCCTTTGAATGAAGG i saiBol1.JH378271 I 6 C 0 s otoGar3.GL873537 22861725 15 + 28711273 gctttTCAATGAGGG i otoGar3.GL873537 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e macNem1.NW_012014910v1 2117172 10598 + 10377808 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T a score=1607982.000000 s hg38.chr17_JH159148v1_alt 52867 295 + 88070 AATTAGATGAGTTGAGATGACACCTGATTCATCGTGGAGTTCTAACATGtttaaaacattttcta---ggaattaccattcatttcagaggaa-tgcaaatt-attaatttccaacttgatacattattatattgtaaatacatctatgtccccattacatctatgttagaaaatagaaattaatcccattctctcccaattatatcctcttactcattcccaaagacagctaatcactctgtcaagttgtaatcctatagctaacttttg----gctttaaaaaatattcatgtaaataaaaa s panTro5.chr17 16363616 293 + 83181570 AATTAGATGAGTTGAGATGATGCCTGATTCATCATGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTAT-ACCATTCATTTGAGAAGAA-TGCAAATT-ATTAATTTTCAACTTGATATAGTATTATATTGTAAATACATCTATGTCCCCATTACATCTATGTTAGGAAATAGAAATTAATTCCATTCTCTCCCAATTATATGCTCTTACTCTTTCCCAAAGACAGCTAATCACTCTATCA-GTTGTAATCCAGTAGGTAACTTTTG----GTTTTTTAAAGTTTTCATGTGAATAAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16268954 294 + 83442489 AATTAGATGAGTTGAGATGACACCTGATTCATCGTGGAGTTCTAAGATGTTTAAAACATTTTCTA---GGAAT-ACCATTCATTTCAGAGGAA-TGCAAATT-ATTAATTTCCAACTTGATACATTATTATATTGTAAATACATCTATGTCCCCATTACATCTATGTTAGAAAATAGAAATTAATCCCATTCTCTCCCAATTATATCCTCTTATTCATTCCCAAAGACAGCTAATCACTCTGTCAAGTTGTAATCCTGTAGCTAACTTTTG----GCTTTAAAAAATATTCATGTAAATAAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4115824 294 + 4267968 AATTAGATGAGCTGAGATGACACCTGATTCATCGTGGAGTTCTAACACATTTAAAACATTTTCTA---GGAAT-ACCATTCATTTCAGAGGAA-TGCAAATC-ATTAATTTCCAACTTGATACATTATTATATTGTAAATACATCTATGTCCCCATTACCTCTATGTTAGAAAATAGAAATTAATTCCATTCTCTCCCAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCACTCTGTCAAGTTGTAATCCTGTAGGTAACTTTTG----GCTTTAAAAAATATTCATGTAAATAAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2103946 293 - 2193130 AATTAGATGAGTTGAGATGATGCCTGATTCATCACGGAGTTCTAACATGTTTAAAACGTTTTCTA---GGTGT-ACCATTCATTTGAGAAAAA-TGCAAACT-AGTAATTTTCAACTTGATATAGTATTATATTGTAAATACATCTATGT-CCCATTACATCTATGTTAGGAAATAGAAATTAATCCCATTCTCTCCCAATTTTATGCTCTTACTCATTCCCAAAGACAGCTAATCACTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG----GCTTTTTAAAGTTTTCATGTGAATAAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2127770 291 + 10377808 AATTAGATTAGTTGAGATGATACCTGATTCATCATGGAGTTCTAATATGTTTAAACCATTTTCTA---GGTAT-ACCATTCATTTGAGAAAAA-TGCAAATT-ATTAATTTCCAACTTGATATAATATTATATTGTAAATACATCTATGTCCCCATTA---CCAGGTTAGGAAATAGAAATTAATCCCATTCTCTCCTAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCTCTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG----GCTTTTTAAAGTCTTCATGTGAGTAAAAA i macNem1.NW_012014910v1 I 10598 C 0 s cerAty1.NW_012006043v1 2008795 294 - 8458610 AATTAGATGAGTTGAGATGACACCTGATTCATCATGGAGTTCTAACATGTTTAAAACATTTTCTA---GATAC-ACCATTCATTTCAGAGGAA-TGCAAATT-ATTAATTTCCAACTTGATACAGTGTTATATTGTAAATACATCTATGTCCCCATTACATCTATGTTAGGAAATAGAAATTAATCTCATTCTCTCCCAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCACTCTGCTACATTCTAATCCAGTGGGTGACTTTTG----GCTTTAAAAAATGTTTGTGTAAATAAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64948818 294 + 75148670 AATTAGATGAGTTGAGATGACACCTGATTCATCGTGGAGTTCTAACATGTTTAACACATTTTCTA---GATAC-ACCATTCATTTCAGAGGAA-TGTAAATT-ATTAATTTCCAACTTGATACAGTATTATATTGTAAATACATCTATGTCCCCAGTACATCTATGTTAGGAAATAGAAATTAATCTCATTCTCTCCCAATTATATCCTCTTACTCGTTCCCAAAGACAGCTAATCACTCTGTTATGTTCTAATCCAGTAGGTAACTTTTG----GCTTTAAAAAATGTTCATGTAAATAAAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205446 294 + 4244037 AATTAGATGAGTTGAGATGACACCTGATTCATCATGGAGTTCTAACATGTTTAAAACATTTTCTA---GATAC-ACCATTCATTTCAGAGGAA-TGCAAATT-ATTAATTTCCAACTTGATACAGTATTATATTGTAAATACATCTATGTCCCCATTACATCTATGTTAGGAAATAGAAATTAATCTCATTCTCTCCCAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCACTCTGTTACGTTCTAATCCAGTAGGTAACTTTTG----GCTTTAAAAAATGTTTGTGTAAATAAAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213202 291 + 4569836 AATTAGATGAGTTGAGATGACACCTCATTTATCGGGGAGTTCTAACATGTTTAAAACATTTTCTA---GATAC-ACCATTCATTTCGGAGGAA-TGCAAATT-ATTAATTTCCAACTTTATACAGTATTATATTGTAAATACATCTATGTCCCCATTGCATCTATGTTAGGAAATAGAAATTAGtctcattctctcccaattatatcctcttactcattctcaAA---AGCTAATCACTCTGTTAAGTTCTAATCCAGTAGGTAACTTTTG----GCTTTAAAAAGTGTTCATGTAAATAAAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3067 291 - 12755 AATTAGATGAGTTGAGATGATACCTGATTCATCTTGGAGTTCTGACATGTTTAAAACATTTTTTA---GATAT-ACCATTCACTTCAGAAGAA-TGCAAATT-ATTAATTTCTAACTTGACATAACATTATGTTGTAAACACACCTATGTCCCCATTA---CGAGGTTAGGAAATAGAAATTAATCCCCTTCTCTCCCAATTATATTCTCTTACTCATTCCCAAAAACAGCTAATCACTCTATCAAGTTGTAATCCATTAGGTAAATTTTA----GCTTTTTAAAATTTTCATGTGAATAAAAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882382 291 + 3513951 AATTAGATGAGTTGAGATGATACCTGATTCAACTTGGAGTTCTGACATGTTTAAAATATTTTTCA---GGTAT-ACCATTCATTTCAGAAGAA-TGCAAATT-ATTAATTTCTAATTTGATACAGCATTATGTTGTAAACACACCCATGTCCCCATTA---TGAGGTTAGGAAATAGAAATTAATCCCCTTCTTTCCCAATTATGTTCTCTTACTCATTCCCCAAAACAGCTAATCACTCTATCAAGTTGTAATCCATTAGATAAATTTTA----GCTTTTTAAAATTTTCATGTGAATAAAAG i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22861740 292 + 28711273 AATTAGATTAGTTGCAGTGATACCTGATTTGCCTTTGTGATCTAACATATT---AACATTTTGGGGGTGGTAT-ACCACTTTTTAAAAAAGAAGCGCAAATTAACTAATTTCCAGCTATAGAGAATATCACAAAGTGAATACATCCCTGTCACTATAA---CCAAGTTAGG--ATGTAAATTAATTCCCCTCCTTCCAAATTACATCCTCTTACTCATCCCAATAGGTCCCTAATCTCTCTATTGATTTGTAACACTGTAGATACATTTTGAGGTGTTTTTGACA---TTTACGTAAAAGAAAA i otoGar3.GL873537 C 0 I 5356 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T a score=200904.000000 s hg38.chr17_JH159148v1_alt 53162 40 + 88070 ttacagtatttgcttctctatttctTTAGCATAATCAAAA s panTro5.chr17 16363909 40 + 83181570 GTATAGTATTTGCTTCTCTATTTCTTTGGCAGAAACAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269248 40 + 83442489 TTACAGTATTTGCTTCTCTATTTCTTTAGCATAATCAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116118 40 + 4267968 TTACAGTATTTGCTTCTCTATTTCTTTAGCATAATCAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2104239 40 - 2193130 GTATAGTATTTGCTTCTCTATTTCTTTGGCATAAACAAAA i nomLeu3.chrUn_GL397460_1 C 0 I 6939 s macNem1.NW_012014910v1 2128061 40 + 10377808 GTGTAGTATTTACTTCTCTATTTCTTTGTCATAAACAAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009089 40 - 8458610 TTATAGTATTTACTTCTCTATTTCTTTGGCATAATCAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949112 40 + 75148670 TTATAATATTTACTTCTCTATTTCTTTGGCATAATCAAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205740 40 + 4244037 TTATAGTATTTACTTCTCTATTTCTTTGGCATAATCAAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213493 40 + 4569836 TTATAGTATTTGTTTCTCTATTTCTTTGGCATAATCAAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3358 40 - 12755 TGATGGGATTTGCTTCTCTATTTCTTTGGCATAATCAAAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882673 40 + 3513951 TTATGGTATTTGTGTCTCTGTATCTTTGGCATAATCAAAA i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T a score=847467.000000 s hg38.chr17_JH159148v1_alt 53202 168 + 88070 GTAATCgttattgcatagtcactttggactcttcatgtcaggagagcagcagacagagaaaggagttactatttggtgaggggtaattatcctcaagccacatagtgtaggagaatgtatctatagctcaggtgatttactgagtatattaacttactagcagtgcca s panTro5.chr17 16363949 168 + 83181570 GTAATCTTTATcgcctagtcattttggactcttcatataagcaaagcagcagacagagaaagtagttactatttggtgagggATAATTACCCTCAAGCCATATAGTGTAGCAGAATATATCTATAGCTCAGGAGATTTACTGAGtgtattaatttactagcactgccc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269288 168 + 83442489 GTAATCgttattgcatagtcactttggactcttcatgtcaggagagcagcagacagagaaaggagttactatttggtgaggggtaattatcctcaaaccatatagtgtaggagaatgtatctatagctcaggtgatttactgagtatattaacttactagcagtgcca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116158 168 + 4267968 GTAATCgttattgcatagtcactttggactcttcatgtcaggagagcagcagacagagaaaggagttactatttggtgaggggtaattatcctCAAGCCATATAGTGTAGGAGAATGTATCTATAGCTCAGGAGATTTACTGAGtgtattaacttactagcagtgcct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111218 168 - 2193130 GGAATCGTtatcgcttagtcattttggactcttcctgtcagcagagcagcagacagagaaaggagttactatttggtgaggggtaattatctttaagctataaagTGTAGCAGAATATATCTATAGCTCAGGATACTTAGTAAGtatattaacttactagcactgcca i nomLeu3.chrUn_GL397460_1 I 6939 C 0 s macNem1.NW_012014910v1 2128101 168 + 10377808 GTAATCCTTATcacctagtaattttggcctcttcctgtcagcagagcagcagacagagaaaggagttactatttggtgaggggtaattatcctTAAGCCATATAGTATAGCAGAATGTATTTATAGCTCAGGATACTTAGTAAGtatattaacttactagcactgcca i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009129 168 - 8458610 GTAATCCTTATTGCAtagtcactttggactcttcatatcaggagagcagcagacagagaaaggagttactatttggtgaggagtaattatcctcaagccatatagtgtaggagaatatatctatagctcaggagatttacggagtatattaacttgctatcagtgcca i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949152 168 + 75148670 GTAATCCTTATTGCATAGTCATTTTGGACTCTTCATATCAGGAGAGCAGCAGACAGAGAAAGGAGTTACTATTTGGTGAGGAGTAATTATCCTCAAGCCACATCGTGTAGGAGAATATATCTATAGCTCAGGAGATTTACGGAGtatattaacttgctatcagtgcca i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205780 168 + 4244037 GTAATCCTTATTGCATAGTcactttggactcttcatatcaggagagcagcagacagagaaaggagttactatttggtgaggagtaattatcctCAAGCCATATAGTGTAGGAGAATATATCTATAGCTCAGGAGATTTACGGAGtatattaacttgctatcagtgccg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213533 168 + 4569836 GTAATCCTTATTGCATAGTcactttggactcttcatatcaggagagcagcagacagagaaaggagttactatttggtgaggagtaattatcctcaagccatatagtgtaggagaatatatctatagctcaggagatttatggagtatattaacttgctatcagtgccg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3398 162 - 12755 GTAATCgttattgcttagtcattttggactcttcgtgtcagcagaccagcagacagagaaaggagttactatttggtgaggagtaaGTATCCTCCAGCCACCTATTGCAGGAGAA------TATAGCTCAGGAGATTTACTGAAtgtattaatttactagcactgcca i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882713 161 + 3513951 GTAATCgttattgcttagtcattttggactcttcatgtcagcagaccagcagacagagaaaggag-tactatttggtgaggagtaattatcctcatGCCACCTATTGTAGGAGAA------TATAGCTCAGGAGATTTACTGAGtatattaatttactagcactgcca i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28060246 801 - 80997621 M e rheMac8.chr16 30171046 4005 - 77216781 T a score=444056.000000 s hg38.chr17_JH159148v1_alt 53370 82 + 88070 -tggtaaattactgcaaaccaagtggcttaaatttattttttcacagttccaaaggcctctagtctggaattaagctgttggc s panTro5.chr17 16364117 80 + 83181570 -tgataaattactgaaaaa-aagtggcttaaatttatttat-caaagttccgaaggcctcttttctgaaattaaggtgttggc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269456 82 + 83442489 -tggtaaattactgcaaaccaagtggcttaaatttattttttcacagttctaaaggcctctagtctggaattaaactgttggc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116326 82 + 4267968 -tggtaaattactgcaaaccaagtggcttaaatttattttttcacagtttcgaaggcctctagtctggaattaagctgttggc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111386 67 - 2193130 -taataaattactgtaaaccaagtggcttaaatttagttttttacagt---------------tcggaaattaagatgttggc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061047 82 - 80997621 -tgataaattactgcaaaccaagtggcttaaatttattttttcacagttccaaaggcttctagtctgaaattaaggtgttggc i macFas5.chr16 M 801 C 0 s macNem1.NW_012014910v1 2128269 67 + 10377808 -tgataaattactgtaaaccaagtggcttaaatttattttttcacagttcca---------------aaattaaggtgtttgc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009297 82 - 8458610 -tgataaattactgcaaaccaagtgacttaaatttattttttcacagttccgaaggcttctagtctgaaattaaggtgttggc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949320 82 + 75148670 -tgataaattactgcaaaccaagtggcttaaatttattttttcacagttccgaaggcttctagtctgaaattaaggtgttggc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2205948 82 + 4244037 -tgataaattactgcaaaccaagtggcttaaatttattttttcacagttccgaaggcttctagtctgaaattaaggtgttggc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213701 82 + 4569836 -tgataaattactgcaaaccaagtggattaaatttattttttcacagttccgaaggcttctagtctgaaattaaggtattggc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3560 83 - 12755 taaacaaattactgcaaaccaagtgacttaaatttgttttgtcacagttccaaaggctactagtctaaaattaaggtgctggc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1882874 83 + 3513951 taaacaaattactgcaaacaaagcgacttaaatttgttttgtcacagttccgaaggctactagtctaaaattaaggtgttggc i saiBol1.JH378271 C 0 I 399 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e cebCap1.NW_016107543v1 17951 995 - 4077172 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=29297.000000 s hg38.chr17_JH159148v1_alt 53452 5 + 88070 aatgt s panTro5.chr17 16364197 5 + 83181570 aatat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269538 5 + 83442489 aatgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116408 5 + 4267968 aatgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111453 5 - 2193130 aatgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061129 5 - 80997621 aatgt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128336 2 + 10377808 aa--- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009379 5 - 8458610 aatgt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949402 5 + 75148670 aatgt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206030 5 + 4244037 aatgt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213783 5 + 4569836 aatat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 3643 5 - 12755 aatgt i calJac3.chr5_ACFV01180105_random C 0 I 396 s saiBol1.JH378271 1883356 5 + 3513951 aatgt i saiBol1.JH378271 I 399 C 0 s cebCap1.NW_016107543v1 18946 5 - 4077172 aatgt i cebCap1.NW_016107543v1 I 995 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=214834.000000 s hg38.chr17_JH159148v1_alt 53457 34 + 88070 tgttttcatctgaagcctgcgagggaagtatctg s panTro5.chr17 16364202 34 + 83181570 tgttttcatcggaagactgcgagggaagtatctg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269543 34 + 83442489 tgttttcatctgaaggctgcgagggaagtatctg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116413 34 + 4267968 tgttttcatctgaaggctgcgagggaagtatctg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111458 34 - 2193130 tgttttcatctgaagcctgtgagggaagtacctg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061134 34 - 80997621 tgttttcatctgaagcctgtgagggaagtatctg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128338 34 + 10377808 tgttttcatctgaaggctgtgagggaagtgtctg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009384 34 - 8458610 tgttttcatctgaaggctgtgagggaaggatctg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949407 34 + 75148670 tgttttcatctgaagcctgtgagggaagtatctg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206035 34 + 4244037 tgttttcatctgaagcctgtgagggaaggatctg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213788 34 + 4569836 tgttttcatctgaagcctgtgagggaagtatctg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4044 28 - 12755 tgttttcatctgaggtccatgaggaaaa------ i calJac3.chr5_ACFV01180105_random I 396 C 0 s saiBol1.JH378271 1883361 28 + 3513951 tgttttcatctgagggctgtgagggaaa------ i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 18951 28 - 4077172 tgttttcatctgaagcctatgagggaaa------ i cebCap1.NW_016107543v1 C 0 C 0 e aotNan1.NW_018505111v1 11780 1019 - 94492 I e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=2484259.000000 s hg38.chr17_JH159148v1_alt 53491 306 + 88070 ttccaggtctctctccttgacttgtagatgtctatcatttccatgtgtgtttgacataagttttctactatatgcatactgtctctgaatttcccccttgtgtatagatatcagtcatatttaatcagaagcctaattgtttccgatatgaccttttcttatcacataacattttaaatgattctatttgaacatgaattttggaggacacaaattaacccataacactgcagaatctcatagtgtgtccatgcccagtgataaccacaaaacagtaaaaacagtaatcacagcggacagtggtat s panTro5.chr17 16364236 305 + 83181570 ttccaggtctctgtccctgacgtgtcgaagtctatcatctccaagtgtgtttgacataatttttctactatatccatactgtctctgaatttctcccttgtggatagaca-cagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttatcagataacattttagatgattctatttgaatatgaattttgagggacACAAATGAACCCATAACACTGCAGAatctcatagtgtgtccatgcccagtgataaccacaaatgagtaaaaacagcaatcacggtggacaatggtat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269577 306 + 83442489 ttccaggtctctctccttgacttgtagatgtctatcatttccatgtgtgtttgacataagttttctactatatgcatactgtctctgaatttcccccttgtgtatggatatcagtcatatttaatcagaagcctaattgtttccaatatgaccttttcttatcacataacattttaaatgattctatttgaacatgaattttggaggacacaaattaacccataacactgcagaatctcatagtgtgtccatgcccagtgataaccacaaaacagtaaaaacagtaatcacagcggacagtggtat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116447 299 + 4267968 ttccaggtctctctccttgacttgtaggtgtctatcatttccatgtgtgtttgacataagttttctactatatgcatactgtctctgaatttcccccttgtgtatagatatcagtcatatttaatcagaagcctaattgtttccaatatgaccttatc-------acaacattttaaatgattctatttGAACATGAATTTTGGAGGACACAAATTAACCCGTAACACCGCAGAatctcttagtgtgtccatgcccagtgataaccacaaaacagtaaaaacagtaatcacagccgacagtggtat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111492 306 - 2193130 ttccaggtctctctccttgacttgttgatgtctatcatttccatgtgcgtttgacataatttttctgttatatgcatactgtctctgaatttcccccttttatatagacatcagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttatcacataacactttaaatgattctatttGAATATGAGTTTTGGGGGAGAAAAATTAACCCATAAcactggagaatctcatagtgtgtccatgtccagtgataaccagaaatcagtaagaacagcaatcacagtggacagtggtat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061168 306 - 80997621 atccaggtctctctccttgacttgtcgatgtctatcatttccatgtgtgtttgacagaatttttctactgtatgcatactgtctttgaattttccccttgtatatagacatcagtcatatttaatcagaggtctaattgtttccaatatgaccttatcttgtcacatagcattttaaatgattctatttgtatatgaattttggaggacacaaattaacccataacaCTGCAGAatctcatagtgcgtccatgcccagtgataaccacagatgagtaagaacagcaatcacagcggacaatggtat i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128372 297 + 10377808 ttccacgtttctctccttgacttgttgatgtctatcatttccatgtgtgtttgacataatttttctactatatgcatactgtctctgaatttcccctttctatgcagacatcagtcatatttaatcagaggaccaattgtttccaatatgactttgtcttaacatgtaacatttcaaatgcttttacttgtgtatgaattttggtggacacaaattaacccataacaCTGGCGAATCTCATAGAGTGTccatgcccaatgataaccacaaatg---------agcaatcccagtggacgatggtat i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009418 306 - 8458610 ttccaggtctctctccttgacttgtagatgtctatcatttccatgtgtgtttgacataatttttctactatatgcatactgcctgtgaattttccccttgtatatagacatcagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttgtcacatagcattttaaatgattctatttatatatgaattttggaggacacgaattaacccataacactgcagaatctcatagtgtgtccatgcccagtgataaccacagatgagtaagaacagcaatcacagcggacaatggtat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949441 304 + 75148670 ttccaggtctctctccttgacttgttgatgtctatcattccca--tgtgtttgacagaatttttctactatatgcatactgtctgtgaattttccccttgtatatagacatcagtcatatttaatcagaggtctaattgtttccaatatggccttgtcttgtcacatagcattttaaatgattctatttGTGTATGAATTTTGGAGGACACAAATTAACCCATAACACTGCAGAatctcatagtgtgtccatgcccagtgataaccacagatgagtaagaacagcaatcacagcggacaatggtat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206069 306 + 4244037 ttccaggtctctctccttgacttgtagatgtctatcatttccatgtgtgtttgacataatttttctactatatgcatactgcctgtgaattttccccttgtatatagacatcggtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttgtcacatagcattttaaatgattctatttATATATGAATTTTGGAGGACACGAATTAACCCATAACACTGCAGAatctcatagtgtgtccatgcccagtgataaccacagatgagtaagaacagcaatcacagcggacaatggtat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2213822 306 + 4569836 ttccaggtttctctccttgacttgttgatgtctatcatttccatgtgtgtttgacacaatttttctactatatgcatactgtctctgaattttccccttgtatatagacatcagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttgtcacatagcattttaaatgattctatttgtatatgaattttggaggacacaaattaacccataacactgcagaatctcatagtgtgtccacgcccagtgataactacagatgagtaagaacagcaatcacagcagacaatggtat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4072 306 - 12755 ttccagctctctctccttgacttgtagttgtctatcatttccatgtgtgattgacgtaatttttctactatctgcagactgtctctgaatttcccccttttatatagacatcagtcatatttaatcacaggcccaattgtttccaacatgaccttgtcttattatataatatttaaaatgattccatttgaatatgaattttgggggacacaaattaacccataacactggagaatctcatagtgtgtccatacccagtaacaaccacaaatgagtaaaaacgggaatcacagtggacaatggtat i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1883389 304 + 3513951 ttccag--ctctctccttgacttgcagatgtctatcatttccatgtgtgtttgacaacatttttctactatctgcatgctgtctgtgaatttcccccttctatatagacatcagtcatatttaatcacgagcccgattgtttccaatatgaccttgccttattatataacatttaaaatgattctatttgaatatgaattttgagggacACAAATTAACCTGTAAcactggagaatctcatagtgtgtccatgcccagtaataatcacaaataagtaaaaacaacaatcacagtggacaatggtat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 18979 305 - 4077172 ttccagctctctctccttgacttgtagatgtctatcatttccatgtatgtttgacataatttttctactgtctgcatactgtctctgaatttcccccttttaagtagacatcagtcatatttaatcacaggcccgattgtttccaatatgagctt-tttcattacataatatttaaaatggttctatttGAATATGAACTTTGGGGGACACAAATTAGTCCATAAcactggagaatctcatagtgtgtctgtgcccagtaataaccacaaatgagtaaaaacaggaatcacagtggacaatggtat i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 12799 306 - 94492 ttccagctctctctccttgacttgtagatgtctatcatttccatgtgtgtttggcataatttttctactatctgcatattgtctctgaatttcccccttttatatagacatcagtcatatttaatcacaggcccaattgtttccaatatgaccttatcttattacataacacttaaaatgattctgtttgaatatgaattttgggggacacaaattaacccataacaCCAGAGAatctcgtagtgtgtccatgctcagtaataaccacaaatgagtaaaaacaggaatcacagtggacaatggtat i aotNan1.NW_018505111v1 I 1019 C 0 e canFam3.chr9 21504125 15749 + 61074082 I e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=1180490.000000 s hg38.chr17_JH159148v1_alt 53797 150 + 88070 agtaaccagg---ggctcagacccttcaggaaggatgctctgagctactccctca-gg------------------cagttatctagacaaacaagagtgctggccaggggtgaagggagaataggactggtggtaattaatggagcttatgaatctcaggtgCACTGTATT s panTro5.chr17 16364541 149 + 83181570 agtaaccagg---ggctcagacccttcaggaaggatgctctgagctactctatca-g-------------------cagttatctagaccaacaagagtgctggccaggggtgaagggaGAATAGAACTCTTGGTAATTAACGGAGTTTATGAAACTTAGGCGCACTGTATT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269883 150 + 83442489 agtaaccagg---ggctcagacccttcaggaaggatgctctgagctactccctca-gg------------------cagttatctggacaaacaagagtgctggccaggggtgaagggagaataggactggtggtaattaatggagcttatgaatctcaggtgCACTGTATT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116746 150 + 4267968 agtaaccagg---ggctcagacccttcaggaaggatgctctgagctactccctca-gg------------------cagttatctagacaaacaagagtgctggccaggggtgaagggaGAATAGGACTGGTGGTAATTAATGGAGCTTGTGAATCTCAGGTGCACTGTATT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111798 150 - 2193130 ggtaactaga---ggctcagacccttcaggaaggaagttctgagctactctatca-gg------------------cagttatccagaccaagaagagtgctggccaggggtgaagggagaatagaaccggtggtaattaatggagattgtgaatctcaggtgcactgtact i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061474 149 - 80997621 agtaactaga---ggctcagacccttcaggaaggacattctgagctactgcctcg-g-------------------cagttatctagagcaacaagagtgctggccaggggtgaaaggagaatagaactggtgggaattaatggagattatgaatctcagGGGCACTGTATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128669 148 + 10377808 agtaactaga---ggctcagacccttcaggaaggaagttctgagctacttcttcatg-------------------tggttacctagaccaaga--agtgctggccagggatgaaaggagaatagaactggtggtaattaatggagattgtgaatctcaggtgCACTGTATT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009724 149 - 8458610 agtaactaga---ggctcagatccttcaggaaggacattctgagctactgcctca-g-------------------cagttatctagaccaacaagagtgctggccaggggtgaaaggagaatagaactggtagtaattaatggagattatgaatctcagGGGCACTGTATT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949745 149 + 75148670 agtaactaga---ggctcagacccttcaggaaggacattctgagctactgcttcg-g-------------------tagttatctagaccaacaagagtgctggccaggggtgaaaggagaatagaactggtggtaattaatggagattatgaatctcaCAGGCACTGTATT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206375 149 + 4244037 agtaactaga---ggctcagacccttcaggaaggacattctgagctactgcctcg-g-------------------cagttatctagaccaacaagagtgctggccaggggtgaaaggagaatagaactggtggtaattaatggcgattatgaatctcagGGGCACTGTATT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214128 149 + 4569836 agtaactaga---ggctcagaccgttcaggaaggatgttctgagctactccctcg-g-------------------cagttatctagaccaacaagagtgctggccaagagtgaaaggagaatagaactggtggtaattaatggagattatgaatctcaggtgcaccgtatt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4378 144 - 12755 agtaactaga---ggctcagacgcttcaggaaggaagttctgaggtattccatca-gg------------------cagttatctagaccaacaggagtgctggccaggggtgaagagagaatagaactggtggtaattaatggagttcatgaatctcaggtgcaa------ i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1883693 145 + 3513951 agtaactagacttggctcagacacttcaggaaggaagttctgaggtattccatca-gg------------------cagt--tctagaccaacaggagtgctggccaggggtgaagggagaatagaactgatggtaattaacggagttcatgaatctcaggtgCAA------ i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19284 144 - 4077172 agtaactaga---ggctcagatgtttcaggaaggaagttctgaggtattccatca-gg------------------cagtcatctagaccaacaggagtgctggccaggggtgaagggaGAAGAGAACTGGTGGTAATTAATGGAGTTCACAAATCTCGGGTGCAA------ i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13105 144 - 94492 agtaagtaga---ggctcagatgcttcaggaaggaagttctgaagtattccatca-gg------------------cagttatctagaccaacaggagtgctggccagaggtgaagggagaacagaactggtggtaattaatggagttcatgaatctcaggtgCAA------ i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39587518 167 - 61074082 AGTAATCAGA---CACTCAGATCCATTGGACAGGATTATCTGGGTTACTCCATTG-GGACATTATCCAAAATAATAGAAATATCCAAAATAATAGAAGCATTGGCTA-AGATAAAGGAAATATAGGACTACTAGCAAAAGATGGAGACGATGAGTATTCGTTGCACGCTACT i canFam3.chr9 T 2106 C 0 e dasNov3.JH570468 562433 27781 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=713103.000000 s hg38.chr17_JH159148v1_alt 53947 91 + 88070 ATAGCAGCAGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATATCTCACTTCCTCCCCCAGCTtttcgtttccttct-----------------------------tcatttttcttt s panTro5.chr17 16364690 91 + 83181570 ATAGCAGAAGTAAGTGTAGATTATTTAA--------TTGGCCTTCAT---TTTATATCTCACTTCCTCTCctttcttttcctttccttct-----------------------------tctttcttcttt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270033 91 + 83442489 ATAGCAGCAGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATGTCTCACTTCCTCCCCCAGcttttcgtttccttct-----------------------------tcatttttcttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116896 91 + 4267968 ATAGCAGCAGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATATCTCACTTCCTCCCCCAGcttttcatttccttct-----------------------------tcatttttcttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111948 91 - 2193130 atagcagcagtaagtgtagcttatttca--------ttggccttcat---tttACATCTCActtcctctcctttcttttcatttccttct-----------------------------tctctctccttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061623 91 - 80997621 ACAGCAGAAGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATATCTCACTTTCTCCCCTAACTTttcctttccttct-----------------------------tcatttttcttt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128817 119 + 10377808 ACAGCAGCAGTAAGTGTTGC-TATTTCA--------CTGGTATTCAT---TTTACATCTTACttcctctcctttcttttcctttacttcttctctctccttcctttctctctccctccctcccttttcttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009873 91 - 8458610 ACAGCAGAAGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATATCTCACTTTCTCCCCTAActtttcctttccttct-----------------------------tcatttttcttt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949894 91 + 75148670 ACAGCAGAAGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATATCTCACTTTCTCCCCTAACTTttcctttccttct-----------------------------tcatttttcttt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206524 91 + 4244037 ACAGCAGAGGTAAGTGTAGCTTATTTCA--------TTGGCCTTCAT---TTTATATCTCACTTTCTCCCCTAActtttcctttccttct-----------------------------tcatttttcttt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214277 91 + 4569836 atagcagaggtaagtgtagcttatttca--------ttggccttcat---tttataTCTCACTTCCTCCCCTAACTTttcctttccttct-----------------------------tcattattcttt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4522 87 - 12755 atagcagcagtaagtgtagcttatttca--------ttgaccttcat---tttatat----cttcctctcctttcttttccttttcttct-----------------------------tccttccttttt i calJac3.chr5_ACFV01180105_random C 0 I 13 s saiBol1.JH378271 1883838 91 + 3513951 ATAGCAGCAGTAAGTGCAGCTTATTTCG--------TTGACTTTCAT---TTTATATCTTACttcctctcctttcttttccttttcttct-----------------------------tccttcctttTT i saiBol1.JH378271 C 0 I 12 s cebCap1.NW_016107543v1 19428 91 - 4077172 ATAGCAGCAGTAAGTGTCGCTTATTTCA--------CTGACCTTCAT---tttgtatcttacttcctctcctttcttttccttttctcct-----------------------------tccttccttttt i cebCap1.NW_016107543v1 C 0 I 108 s aotNan1.NW_018505111v1 13249 91 - 94492 ATAGCAGCAGTAAGTGTAGCTTGTTTCA--------TTGACCTTCAT---tttatatcttacttcctctcctttcttttccttttcgtct-----------------------------tccttccttttt i aotNan1.NW_018505111v1 C 0 I 5 s canFam3.chr9 39587685 67 - 61074082 ACAGTGCCAGTAGCTGCCGCTTCTTCCA--------TTAGACTTCCT---GTTATA---------CACCCCTTTATTTTCCTCCCCA-------------------------------------------- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 590214 90 - 852752 aTAGTAGCAGTAATTGTAGAATGTTTCACAGTATCTCTTGCCTGCCTGCCTTTGTGcctgccttccttcattccttctgtccttccttct----------------------------------------- i dasNov3.JH570468 I 27781 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=16037.000000 s hg38.chr17_JH159148v1_alt 54038 2 + 88070 ct s panTro5.chr17 16364781 2 + 83181570 ct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270124 2 + 83442489 ct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116987 2 + 4267968 at i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112039 2 - 2193130 ct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061714 2 - 80997621 ct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128936 2 + 10377808 ct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009964 2 - 8458610 ct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949985 2 + 75148670 ct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206615 2 + 4244037 ct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214368 2 + 4569836 ct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4622 2 - 12755 TT i calJac3.chr5_ACFV01180105_random I 13 C 0 s saiBol1.JH378271 1883941 2 + 3513951 CT i saiBol1.JH378271 I 12 C 0 s aotNan1.NW_018505111v1 13345 2 - 94492 ct i aotNan1.NW_018505111v1 I 5 I 96 s canFam3.chr9 39587752 2 - 61074082 CC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 590304 2 - 852752 ct i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 19519 108 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=17277.000000 s hg38.chr17_JH159148v1_alt 54040 6 + 88070 ttcttt s panTro5.chr17 16364783 6 + 83181570 ttcttt i panTro5.chr17 C 0 I 253 s panPan2.chr17 16270126 6 + 83442489 ttcttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116989 2 + 4267968 tt---- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112041 6 - 2193130 cttcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061716 6 - 80997621 tttgtt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128938 6 + 10377808 ttcttt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2009966 6 - 8458610 tttgtt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949987 6 + 75148670 tttgtt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206617 6 + 4244037 tttgtt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214370 6 + 4569836 ttcttt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4624 6 - 12755 TACTTt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1883943 6 + 3513951 TACTTT i saiBol1.JH378271 C 0 C 0 s canFam3.chr9 39587754 6 - 61074082 TTCTTC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 590306 6 - 852752 tcctct i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 13347 96 - 94492 I e cebCap1.NW_016107543v1 19519 108 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=10985.000000 s hg38.chr17_JH159148v1_alt 54046 4 + 88070 -ttct s panPan2.chr17 16270132 4 + 83442489 -ttct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116991 4 + 4267968 -ttct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112047 4 - 2193130 -tcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061722 4 - 80997621 -tcct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128944 4 + 10377808 -ctct i macNem1.NW_012014910v1 C 0 I 94 s cerAty1.NW_012006043v1 2009972 4 - 8458610 -tcct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949993 4 + 75148670 -tcct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2206623 4 + 4244037 -tcct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214376 4 + 4569836 -ccct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4630 4 - 12755 -ttct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1883949 4 + 3513951 -CTCT i saiBol1.JH378271 C 0 C 0 s canFam3.chr9 39587760 3 - 61074082 --TCT i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 590312 4 - 852752 ctcc- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 13347 96 - 94492 I e cebCap1.NW_016107543v1 19519 108 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=113346.000000 s hg38.chr17_JH159148v1_alt 54050 28 + 88070 tcaatcaccccttc--tccttccttccttc s panPan2.chr17 16270136 28 + 83442489 tcaatcaccccttc--ttcttccttccttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4116995 28 + 4267968 tcaatcacccctcc--tccttccttccttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112051 19 - 2193130 t---------cttt--tccttccttccttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061726 28 - 80997621 tcaatcaccccttc--tccttccttccttc i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2009976 28 - 8458610 tcaatcaccccttc--tccttccttccttc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64949997 28 + 75148670 tcaatcactccttc--tccttccttccttc i chlSab2.chr16 C 0 I 1 s manLeu1.NW_012106252v1 2206627 28 + 4244037 tcaatcaccccttc--tccttccttccttc i manLeu1.NW_012106252v1 C 0 T 7367 s colAng1.NW_012122154v1 2214380 28 + 4569836 tcaatcaccccttc--tccttccttccttc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4634 27 - 12755 ttccttcctccctc---ccttccttcctcc i calJac3.chr5_ACFV01180105_random C 0 I 2 s saiBol1.JH378271 1883953 27 + 3513951 TTCCTCCCTCCCTC---Cctccctcccttc i saiBol1.JH378271 C 0 I 2 s canFam3.chr9 39587764 29 - 61074082 -CCAACAttcctttcttatttccttccttc i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 590316 25 - 852752 ---ttacctccttc--ctcttccctccctc i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 13347 96 - 94492 I e cebCap1.NW_016107543v1 19519 108 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macNem1.NW_012014910v1 2128948 94 + 10377808 I e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=4473.000000 s hg38.chr17_JH159148v1_alt 54078 10 + 88070 --atgttttttt s panPan2.chr17 16270164 10 + 83442489 --atgttttttt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117023 10 + 4267968 --atgttttttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112070 10 - 2193130 --ctttcttctt i nomLeu3.chrUn_GL397460_1 C 0 I 169 s macFas5.chr16 28061754 8 - 80997621 --atgttttt-- i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2010004 8 - 8458610 --aggttttt-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950026 8 + 75148670 --tgtttttt-- i chlSab2.chr16 I 1 C 0 s manLeu1.NW_012106252v1 2199288 8 + 4244037 --aggttttt-- i manLeu1.NW_012106252v1 T 7367 C 0 s colAng1.NW_012122154v1 2214408 8 + 4569836 --atgttttt-- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4663 8 - 12755 --cctttctt-- i calJac3.chr5_ACFV01180105_random I 2 I 1 s saiBol1.JH378271 1883982 8 + 3513951 --ccttcttt-- i saiBol1.JH378271 I 2 I 1 s dasNov3.JH570468 590341 10 - 852752 ctttctttct-- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 13347 96 - 94492 I e cebCap1.NW_016107543v1 19519 108 - 4077172 I e canFam3.chr9 39587793 0 - 61074082 C e otoGar3.GL873537 22862032 5356 + 28711273 I e macNem1.NW_012014910v1 2128948 94 + 10377808 I e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=68140.000000 s hg38.chr17_JH159148v1_alt 54088 25 + 88070 ttggttcctttatccct-----tcccttcc s panPan2.chr17 16270174 28 + 83442489 --ggttcctttatccctacccttcccttcc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117033 24 + 4267968 -tggttcctttatccct-----tcccttcc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112249 25 - 2193130 ttccttcctttctctct-----ctctctct i nomLeu3.chrUn_GL397460_1 I 169 C 0 s macFas5.chr16 28061762 25 - 80997621 ttcattcctttttccct-----tcccttcc i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2010012 25 - 8458610 ttcatttctttttccct-----tcccttcc i cerAty1.NW_012006043v1 C 0 I 5 s chlSab2.chr16 64950034 25 + 75148670 ttcattcctttttccct-----tcccttcc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2199296 25 + 4244037 ttcattcctttttccct-----tcccttcc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214416 25 + 4569836 ttcattcctttttccct-----tccctttc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4672 24 - 12755 ttcctcgcttttcctct-----ctctctt- i calJac3.chr5_ACFV01180105_random I 1 I 1 s saiBol1.JH378271 1883991 24 + 3513951 cttctccctctctctct-----cttgctt- i saiBol1.JH378271 I 1 I 1 s dasNov3.JH570468 590351 24 - 852752 -ttcttccttccttcct-----tccAGTCT i dasNov3.JH570468 C 0 I 5 e aotNan1.NW_018505111v1 13347 96 - 94492 I e cebCap1.NW_016107543v1 19519 108 - 4077172 I e canFam3.chr9 39587793 0 - 61074082 C e otoGar3.GL873537 22862032 5356 + 28711273 I e macNem1.NW_012014910v1 2128948 94 + 10377808 I e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=32524.000000 s hg38.chr17_JH159148v1_alt 54113 11 + 88070 ctttccttttc- s panPan2.chr17 16270202 11 + 83442489 ctttccttttc- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117057 11 + 4267968 ctttccttttc- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112274 11 - 2193130 ttctctctttc- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2129042 11 + 10377808 ttctttctttc- i macNem1.NW_012014910v1 I 94 C 0 s cerAty1.NW_012006043v1 2010042 11 - 8458610 cttccctttcc- i cerAty1.NW_012006043v1 I 5 C 0 s chlSab2.chr16 64950059 11 + 75148670 cttccctttcc- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2199321 11 + 4244037 cttcccttccc- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214441 11 + 4569836 ctttcttttcc- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4697 11 - 12755 cttgcttgctt- i calJac3.chr5_ACFV01180105_random I 1 I 3 s saiBol1.JH378271 1884016 11 + 3513951 ctttcttgctt- i saiBol1.JH378271 I 1 I 1 s canFam3.chr9 39587793 10 - 61074082 -tttccttttt- i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 590380 11 - 852752 -TTTTCCTCCCA i dasNov3.JH570468 I 5 C 0 e aotNan1.NW_018505111v1 13347 96 - 94492 I e cebCap1.NW_016107543v1 19519 108 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28061787 0 - 80997621 C e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=6542.000000 s hg38.chr17_JH159148v1_alt 54124 4 + 88070 cttc- s panPan2.chr17 16270213 4 + 83442489 cttc- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117068 4 + 4267968 cttc- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112285 4 - 2193130 tttc- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2129053 4 + 10377808 ttct- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010053 4 - 8458610 tttc- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950070 4 + 75148670 tttc- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2199332 4 + 4244037 ttcc- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214452 4 + 4569836 tttc- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4711 3 - 12755 -ctc- i calJac3.chr5_ACFV01180105_random I 3 I 6 s saiBol1.JH378271 1884028 3 + 3513951 -ctc- i saiBol1.JH378271 I 1 I 6 s aotNan1.NW_018505111v1 13443 1 - 94492 ---c- i aotNan1.NW_018505111v1 I 96 I 4 s canFam3.chr9 39587804 4 - 61074082 attc- i canFam3.chr9 I 1 I 1 s dasNov3.JH570468 590391 4 - 852752 -CTCA i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 19519 108 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28061787 0 - 80997621 C e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=1560.000000 s hg38.chr17_JH159148v1_alt 54128 4 + 88070 -cttt s panPan2.chr17 16270217 4 + 83442489 -cttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117072 4 + 4267968 -cttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112289 4 - 2193130 -tttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2129057 3 + 10377808 -ctt- i macNem1.NW_012014910v1 C 0 I 2 s cerAty1.NW_012006043v1 2010057 3 - 8458610 -ctt- i cerAty1.NW_012006043v1 C 0 I 2 s chlSab2.chr16 64950074 3 + 75148670 -ctt- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2199336 3 + 4244037 -ttt- i manLeu1.NW_012106252v1 C 0 I 21863 s colAng1.NW_012122154v1 2214456 3 + 4569836 -ctt- i colAng1.NW_012122154v1 C 0 I 12 s calJac3.chr5_ACFV01180105_random 4720 3 - 12755 -ttt- i calJac3.chr5_ACFV01180105_random I 6 C 0 s saiBol1.JH378271 1884037 3 + 3513951 -ttt- i saiBol1.JH378271 I 6 C 0 s cebCap1.NW_016107543v1 19627 3 - 4077172 -ttt- i cebCap1.NW_016107543v1 I 108 C 0 s aotNan1.NW_018505111v1 13448 3 - 94492 -ttt- i aotNan1.NW_018505111v1 I 4 C 0 s canFam3.chr9 39587809 3 - 61074082 -ctc- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 590395 4 - 852752 CCTT- i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28061787 0 - 80997621 C e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=100661.000000 s hg38.chr17_JH159148v1_alt 54132 29 + 88070 cttcctcccttct---ctttttcttttttgtt--- s panPan2.chr17 16270221 28 + 83442489 cttcctcccttct---ctttttcttttt-gtt--- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117076 29 + 4267968 cttcctcccttct---ctttttcttttttgtt--- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112293 29 - 2193130 cttccttccttct---ttcttctttctttctt--- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061787 25 - 80997621 ----cttctctct---ctctttcttttttctt--- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129062 29 + 10377808 tttctttctttct---ttctttctttctttct--- i macNem1.NW_012014910v1 I 2 C 0 s cerAty1.NW_012006043v1 2010062 29 - 8458610 cttctctctctct---ttcctttttgtttctt--- i cerAty1.NW_012006043v1 I 2 C 0 s chlSab2.chr16 64950077 26 + 75148670 ---ctctctctct---ttcttttttgtttctt--- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221202 30 + 4244037 cttccttccctctg--ttgttctgtttttctt--- i manLeu1.NW_012106252v1 I 21863 C 0 s colAng1.NW_012122154v1 2214471 29 + 4569836 cttctctctctct---ttcttttttgtttctt--- i colAng1.NW_012122154v1 I 12 C 0 s calJac3.chr5_ACFV01180105_random 4723 27 - 12755 cttccttttttct---ctc--tctttcttttt--- i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884040 23 + 3513951 cttcctctttttt---ctc------tcttttt--- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19630 29 - 4077172 cttcctctttttt---ctctctctttcttttt--- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13451 32 - 94492 cttcctctttttttgcctctctctttcttttt--- i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39587812 29 - 61074082 cttcctATGATTT---CTTCTTCTCTATAATT--- i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 590399 29 - 852752 ---CCCTCTGTCC---CCACTTCCGCCTATTAATA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T e panTro5.chr17 16364789 253 + 83181570 I a score=309644.000000 s hg38.chr17_JH159148v1_alt 54161 37 + 88070 tcttttctctttcct---cctctcatcttctgttccttct- s panTro5.chr17 16365042 40 + 83181570 tcttttctctttccttctcctctcatcttctgtcccttct- i panTro5.chr17 I 253 C 0 s panPan2.chr17 16270249 37 + 83442489 tcttttctctttcct---cctctcatcttctgttccttct- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117105 37 + 4267968 tcttttctctttcct---cctctcatcttctgttccttct- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112322 37 - 2193130 ccttccttttgtcct---ccactcatcttctgtcccttct- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061812 40 - 80997621 tcttttctctttcctcctcctctcatcttctgttacttct- i macFas5.chr16 C 0 I 6 s macNem1.NW_012014910v1 2129091 40 + 10377808 ttctttctttcttctcctccactcatcttctgtcccttct- i macNem1.NW_012014910v1 C 0 T 10301 s cerAty1.NW_012006043v1 2010091 40 - 8458610 tcttttctctttcctcttcctctcatcttctgttccttct- i cerAty1.NW_012006043v1 C 0 I 9 s chlSab2.chr16 64950103 40 + 75148670 tcttttctctttcctcctcctctcatcttctattccttct- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221232 40 + 4244037 tctttcgtctttcctcctcttctcatcttctgtcccttcc- i manLeu1.NW_012106252v1 C 0 T 5518 s colAng1.NW_012122154v1 2214500 40 + 4569836 tcttttctctttcctcctcctctcatcttctgttccttct- i colAng1.NW_012122154v1 C 0 I 9 s calJac3.chr5_ACFV01180105_random 4750 40 - 12755 tcttttctctttccttctCCTCTCAtcttctgtcccttct- i calJac3.chr5_ACFV01180105_random C 0 I 9 s saiBol1.JH378271 1884063 40 + 3513951 tcttttctctttccttctcctctcctctcctgtcccttct- i saiBol1.JH378271 C 0 I 9 s cebCap1.NW_016107543v1 19659 37 - 4077172 tcttttgtctttcctt---ctctcatcttctatcccttct- i cebCap1.NW_016107543v1 C 0 I 9 s aotNan1.NW_018505111v1 13483 40 - 94492 tcttttccctttccttctcctcccatcttctgtcccttct- i aotNan1.NW_018505111v1 C 0 I 9 s canFam3.chr9 39587842 33 - 61074082 tcttctttttctcctcctc-------cttcttttccttat- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 590428 37 - 852752 ----TTTCTTCGACTCCTCCTTTACTTCTCTTCCCCTTCAT i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=992775.000000 s hg38.chr17_JH159148v1_alt 54198 136 + 88070 cttcctct----cctctg---------cttcttccttctttTAGAGCTTGTGGCTCTCCATCACATT-----TAAACAGCAAA------------------------GATTTGACTTGAGTGGAGC-------------TAATTGTAGATCTCAGA-CAAGTTTTCGTAAGTGCGCCCATATATCTTGCATG s panTro5.chr17 16365082 145 + 83181570 cttcctctgcttcctctct----tcctcttcttctttcTCCTAGAGCTTGTGGCTGTCCATCCTATT-----TAAGTAGCAAA------------------------TATTTGACTTGAGTGGAGC-------------TAGCTGTAGATCGTAGA-CAAGTTTTCATGACTGCACCCATATATCTTGGATG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270286 136 + 83442489 cttcctct----cctctg---------cttcttccttcttCTAGAGCTTGTGGTTCTCCATCACATT-----TAAACAGCAAA------------------------GATTTGACTTGAGTGGAGC-------------TAATTGTAGGTCTCAGA-CAAGTTTTCGTAAGTGCGCCCATATGTCTTGCATG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117142 136 + 4267968 cttcctct----cctctg---------cttcttccttcttCTAGAGCTTGTGGCTCTCCATCACGTT-----TAAACAGCAAA------------------------GATTTGACTTGAGTGGAGC-------------TAATTGTAGGTCTCAGA-CAGGTTTTCGTAAGTGCGCCCATATATCTTGCATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112359 145 - 2193130 cttactcc----tctttctcaccttctcttcttccttcttCTAGAGCTTGTGGCTGTCCATCACATT-----TAAGTAGCAAA------------------------GGTTTTACTTGAGTGGAGC-------------TAATTGTATATCGTAGA-TAACTCTTCATGACTGCACCCATATATATTAGatc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28061858 136 - 80997621 cttcctct----cctctg---------cttctttcttcttCTAGAGCTTGTGGCTGTGCATCACATT-----TATACAGCAAA------------------------GATCTGACTTGAGTGGAGG-------------TACTTGTAGGTCTCAGA-CAAGTTTTCATAAGTTCACCCATATATCTTGCATG i macFas5.chr16 I 6 C 0 s macNem1.NW_012014910v1 2118830 134 + 10377808 cttcctct----cttcct---------cttcttccttCTCCTAGA-CTTGTGGCTGTCCATCATATT-----TAAGTAGCAAA------------------------TATTTGACTTGAGTGGAGC-------------TAATTGT-GATCGTAGA-CAAGTTTTCATGATTGCATCCCTATATCTTGGATA i macNem1.NW_012014910v1 T 10301 C 0 s cerAty1.NW_012006043v1 2010140 136 - 8458610 cttcctct----cctctg---------cttctttcttcttctAGAACTTGTGGCTGTACATCACATT-----TATACAGCAAA------------------------GATCTGACTTGAGTGGAGG-------------TACTTGTAGGTCTCAGA-CAAGTTTTCATAAGTTCACCCATATATCTTGCATG i cerAty1.NW_012006043v1 I 9 C 0 s chlSab2.chr16 64950143 136 + 75148670 cttcctct----cctctg---------cttctttcttcttCTAGAGCTTGTGGCTGTGCATCACATT-----TATACAGCAAA------------------------GATCTGATGTGAGTGGAGG-------------TACTTGTAGGTCTCAGA-CAAGTTTTCATAAGTTCACCCATATATCTTGCATG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2215754 136 + 4244037 CTTCCTCT----CTTCCT---------CTTCTTCCTTCTCATAGAGCTTGTGGCTGTTCATCGTATT-----TAAGTAGCAAA------------------------TATTTGACTTGAGTGGAGC-------------TAATTGTAGATCGTAGA-CAAGTTTTCATGACTTCACCCATATATCTTGGATA i manLeu1.NW_012106252v1 T 5518 C 0 s colAng1.NW_012122154v1 2214549 136 + 4569836 cttcctct----cctctg---------cttctttcttcttCTAGAGCTTGTGGCTGTGCATCACATT-----TAAACAGCAAA------------------------GATCTGACTTGAGTGGAGG-------------TAATTGTAGGTCTCAGA-CAAGTTTTCATAAGTTCACTCATATATCTTGcatg i colAng1.NW_012122154v1 I 9 C 0 s calJac3.chr5_ACFV01180105_random 4799 136 - 12755 cttcctct----cctcct---------cattttccttcctctAGAGCTTGTGGCTGTCCATGACATT-----TAAGTAGCAAA------------------------GATTTGACTTGAGTGGAGC-------------TAATTGTAGACTGTAGA-AAAGTTTTCATGACTGCGCCCATATAACTTGGATC i calJac3.chr5_ACFV01180105_random I 9 C 0 s saiBol1.JH378271 1884112 136 + 3513951 cctcctct----cctcct---------ctttttccttctTTTAGAGCTTGTGGCTGTCCATGACATT-----TAAGTAGCAAA------------------------GATCTGACTTGAGTGGAGC-------------TAATTGTAGATTGTAGA-AAAGTTTTCACGACTGCACCCATATAACTTGAATC i saiBol1.JH378271 I 9 C 0 s cebCap1.NW_016107543v1 19705 136 - 4077172 cttcctct----cctcct---------ctttttccttcttCTAGAGTTTGTGGCTGTGCATGACATT-----TAAGCAGCAAA------------------------GATTTGACTTGAGTGGAGC-------------TAATTGTAGGTTGTAGA-AAAGTTTTCATGACTGCACCCATATAACTTGGATC i cebCap1.NW_016107543v1 I 9 C 0 s aotNan1.NW_018505111v1 13532 136 - 94492 cttcctct----ccttct---------ctttttccttcttCTAGAGCTTGTGGTTGTCCATGACATT-----TAAGTAGCAAA------------------------TATCTGACTTGAGTGGAGC-------------TAATTGTAGATTGTAGA-AAAGTTTTCATGACTGCACCCATATAACTTGGatc i aotNan1.NW_018505111v1 I 9 C 0 s canFam3.chr9 39587875 125 - 61074082 ------------------------------tcatctttttctAGAAATTGTGGGTCTCCATCACCTT-----GAAAAAACAGA------------------------GATTAGTC-TGAGAGGAACAAAGATGATGTATTCATTGTAGATGATATA-------TTCAATACCTCACTTctatgtgctgagta i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 590465 162 - 852752 CTTCCTTTA---TTTCTT---------ATTCCTTATTTTTCAAAAAATTGTA----TACATGATTTTGAATATGAAAAACAAATTGGGGTAAGTTAACATGGTGTGTGACTCGATCTGTATGGAGG-------------AAAATTTGTATTCTGCATTATGTTTTGATTACC-CACCCAAGTATCTTATATC i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30171046 4005 - 77216781 T a score=1352748.000000 s hg38.chr17_JH159148v1_alt 54334 131 + 88070 TTAGTGTGCTTGGATTAATTTCCATCTGTCAGAGTCCGCATCTC-------------TGTGGCCAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------CCACCTGTG-------------------AATGCAACACAgagaaaaacactcaaccaatgattct s panTro5.chr17 16365227 131 + 83181570 TTAGTGTGCTTAGATcaatttctatctgtcaaaatctgcatctc-------------tctgcctaagggctctt------gt-attgcagctgcagaaagtcatg--------ccacctgtg-------------------aatgcaacacagagaaaaacactcaaccaatgattct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270422 131 + 83442489 TTAGTGTGCTTGGATTAATTTCCATCGGTCAGAGTCCGCATCTC-------------TGTGGCTAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------CCACCTGTG-------------------AATGCAACACAgagaaaaacactcaaccaatgattct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117278 131 + 4267968 TTAGTGTGCTTGGATTAATTTCCATCTGTCAGAGTCCGCATCTC-------------TGTGGCTAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------CCACCTGTG-------------------AATGCAACACAgagaaaaacactcatccaatgattct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112504 131 - 2193130 ttagtgtgcttggactaatttccttctgttagaatctgcatctc-------------tgtgcctaagggctctt------gt-attgctgctgtaagaagtcatg--------tcacctgtg-------------------aatgcaacacagagaaaaacactcaaccaatgattct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167041 131 - 77216781 TTAATGTGCTTGGATTAatttccatctgtcaaaatctgcatctc-------------tgtgcctaagggctctT------GT-ATTGCAGCTGTAGAAAGTCATG--------CCACCTGTG-------------------AAGGCAACACAGAGAAAAACACTCAACCAGTGATTCT i rheMac8.chr16 T 4005 C 0 s macFas5.chr16 28061994 131 - 80997621 TTAGTGTGCTTGGATTAATTTCCATCTGTCAGAGTCTGCATCTC-------------TATGGCTAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------TCACCTGTG-------------------AAGGCAACACAgagaaaaacactcaaccaatgattct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2118964 131 + 10377808 TTAGTGTGCTTGGATTAATTTCCATCTGTCAAAATCTGCATCTC-------------TGTGCCTAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------CCACCTGTG-------------------AATGCAACACAGAGAAAAACACTCAACCAGTGATTCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010276 131 - 8458610 TTAGTGTGCTTGGATTAATTTCCATCTGTCAGAGTCTGCATCTC-------------TGTGGCCAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------TCACCTGTG-------------------AAGGCAACACAgagaaaaacactcaaccaatgattct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950279 131 + 75148670 TTAGTGTGCTTGGATTAATTTCCATCTGTCAGAGTCTGCATCTC-------------TGTGGCCAACGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------TCACCTGTG-------------------AAGGCAACACAgagaaaaacactcaaccaacgattct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2215890 131 + 4244037 TTAGTGTGCTTGGATTAATTTCCATCTGTCAAAATCTGCATCTC-------------TGTGCCTAAGGGCTCTT------GT-ATTGCAGCTGTAGAAAGTCATG--------TCACCTGTG-------------------AATGCAACACAGAGGAAAACACTCAACCAGTGATTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214685 131 + 4569836 ttagtgtgcttggattaatttccatctgtcagagtctgcatctc-------------tgtggctaagggctctt------gt-atcgcagctgtagagagtcatg--------tcacctgtg-------------------aaggcaacacagagaaaaacgctcaaccaatgattct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4935 124 - 12755 TTAGTGTGCTTGGActaattt-------ccagaatctgcatctc-------------tgtgcctaaggactctt------gt-attgcagctatagaaagtcatg--------tcacctgtg-------------------catgacacacagaggaaaacactcaaccaatgattct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884248 131 + 3513951 TTAGTGTGCTTGGAATAatttccatctgccagaatctgcatctc-------------ggtgcctaaggactctt------gt-attgcagctgtagaaagtcatg--------tcacctgtg-------------------catgacacacagagaaaaacactcaaccaatgattct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19841 131 - 4077172 TTATTGTGCTTggactaatttccatctgccagaatctgcatctc-------------tgtgcctaaggactctt------ga-attgcagctgtagaaagccatg--------ttacctgtg-------------------catgacacacacagaaaaacactcaaccaatgattct i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13668 131 - 94492 ttagtgtgcttggactaatttccatctgccagaatctgcatctc-------------tgtgcctaaggactctt------gt-attgcagctgtagaaagtcatg--------tcacctgtg-------------------catgacacacagagaaaaacactcaaccaatgattct i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39588000 174 - 61074082 ttagtgtcttt----tcaaatccatctgctgaagacttaatccccaatgagatgacatttagagatgggatctttaagaggtaattatatttggatgaggttatgaggatgaaccccctataataggattgatgttcttataatgagagacagagaccaaagctctctcactttctct i canFam3.chr9 C 0 I 718 s dasNov3.JH570468 590627 130 - 852752 TTGGTGTATTCGGATTATCTTCCATCTTCCAATATCTGCACCTC-------------TCCTCCTAACAGCCCTT------TT-TAAACAAGTGTACAAAGTCATG--------TGCCCTGTG-------------------TATATCTTGCTGAGAAAAACAC-AAACCCATATTTTT i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=1474299.000000 s hg38.chr17_JH159148v1_alt 54465 150 + 88070 ggag---agctgatttataaagactctagcttcctcattcctgaagtaggataattct-agctgtgtgtttttcatcatttctgatagttttccctttagtttaagctttagttggtgactgtgat-actgactttatagtgtacccttttctgt s panTro5.chr17 16365358 150 + 83181570 ggag---agctgatttataaagactctagcttcctcattcctgaagtaggataattcc-agctatgtgtttttcaccatttctgataattttcactttagtttaagctttagttggtgactgtgat-actgacttaatagtgtacccttttctgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270553 150 + 83442489 ggag---agctgatttataaagactctagcttcctcattcctgaagtaggataattct-aactgtgtgtttttcatcatttctgatagttttccctttagtttaagctttagttggtgactgtgat-actgactttatagtgtgcccttttctgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117409 150 + 4267968 ggag---agctgatttataaagactctagcttcctcattactgaagtaggataattct-agctgtgtgtttttcatcatttctgatagttttccctttagtttaagctttagttggtggctttgat-actgactttatagtgaacccttttctgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112635 150 - 2193130 ggag---agctgatttataaagactctagcttcctcattcctgaagtaggataattct-agctgggtgtatttcgtcatttctgataattttccctttagtttaagctttagctggtgactgtgat-actgacttgatagtgtacccttttctgt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167172 153 - 77216781 GGAGATTAGTTGATTTATAAAGACTCTAGCTTCCTCATTCCTGAAGTAGGATAATTCT-AGCTGTGTGTTTTTCATCATTTCTGATAATTTTCCCTTTAGTTTAAGCTTTAGTTGGTGACTGTGAT-ACTGACTTAATAGTGAAcccttttctgt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28062125 150 - 80997621 ggag---agctgatttgtaaagactctagcttcctcattcctgaagtaggataattct-agctgtgtgtttttcaacttttctaacaggtttccctttagtttaaagtttagttggtgactgtgat-actgacttaatagtgaaccctcttctgt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2119095 147 + 10377808 GGAG---AGCTGATTTATAAAGACTGTAGCT---TCATTCCTGAGGTAGGATAATTCT-AGCTGTGTGTTTTTCATCATTTCTGATAATTTTCGCTTTAGTTTAAGCTTTAGTTGGTGACTGTGAT-ACTGACTTAATAATGAACCCTTTTCTGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010407 150 - 8458610 ggag---agctgatgtataaagactctagcttcctcattcctgaagtagggtaattct-agctgtgtgtttttcatcttttctgatagatttccctttagtttaaagtttaattgctcactgtgat-actgacttaatagtgaaccctcttctgt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950410 150 + 75148670 ggag---aactgatttataaagactctagcttcctcattcctgaagtagggtaattct-agctgtgtgtttttcatcttttctgatagatttccctttagtttaaagtttaattgctcactgtgat-actgacttaatagtgaaccctcttctgt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216021 150 + 4244037 GGAG---AGCTGATTTATAAAGACTCTAGCTTCCTCATTCCTGAAGTAGGATAATTCT-AGCTGTGTGTTTTTCATCATTTCTGATAATTTTCCCTATAGTTTAAGCTTTAGTTGGAGACTGTGAT-ACTGACTTAATAGTGAAcccttttctgt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214816 150 + 4569836 ggag---agctgatttataaagactctagcttcctcattcctgaagtaggataattct-agctgtgtgtttttcatcttttctgataggtttccctttagtttaaagtttagttggtgacagtgat-actgccttaatagtgaaccctcttctgt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5059 150 - 12755 ggag---tgctgatttatgaagactccagcttcctcattcctgaagtaggataattct-agctgtgtcgttttcatcatttctgacagttttccctttagtttaagcttcagttggtcactctgat-attggcttaatagtgtaccattttctgt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884379 150 + 3513951 ggag---tgctgatttatgaagactctagcttcctcattcctgaagtaggataattct-agctgtatctttttcatcatttctgatagttttccctttaatttaagctttagttggtcactgtgat-actggcttaatagtgtaccatttTCTGT i saiBol1.JH378271 C 0 I 123 s cebCap1.NW_016107543v1 19972 150 - 4077172 ggag---tgctgatttatgaagactgtagcttcctcattcctgaagtaggataattct-agctgtgtctttttcatcatctctgatagttttccctttagtttaagctttagttggtcagcgtgat-actggcttaatagtgtaccattttctgt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13799 145 - 94492 ggag---tgctgatttatgaagactctagcttcctcattcctgaagtaggataattct-agctgtgtcttttccatcatttctgatagttttctc-----tttaagctttagctggtcactgtgat-actggcttaatagtgtaccattttctgt i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 590757 132 - 852752 GGAG---AGTTGACTT-TAAAGACCCCA-----------------gtagaataattccaaactttgtgttttacacta--tctgatagcttccattcacgttgaaacttcagttccccactgtgatggcctgcttgatagtgtaattttccctgt i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=1648152.000000 s hg38.chr17_JH159148v1_alt 54615 190 + 88070 atcacttccccaattcc-taccggtgtgatctgcacttccc-agtaaactagtttcactggaatcttttcttcaaagtcttttc-gggagaaactaatctatgacaTTATGttaactccctcagcctcaattttcttatctctacgctgggaatattaatacctattctgaaagtttgttaaagagttaataa s panTro5.chr17 16365508 186 + 83181570 atcacttccccaatccc-taccagtatgatctgcacttccc-agtaaactagtttcagtggaatttttt-ttcagagtctcttctgggagaaACTCATCTATTACTATACATTAActc----agcctcaaatttttcacctctacaaggggaaaattaatacctattttgaaagtttgttaaatagttaataa i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270703 190 + 83442489 atcacttccccaattcc-taccggtgtgatctgcacttccc-agtaaactagtttcactggaatcttttcttcaaagtcttttc-aggagaaactaatctatgacaTTATGttaactccctcagcctcaattttcttatctctacgctgggaatattaatacctattctgaaagtttgttaaagagttaataa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117559 190 + 4267968 atcacttccccaattcc-taccggtgtgatctgcacttccc-agtaaactagtttcactggaatcttttcttcaaagtcttttc-gggagaaactaatctatgacaTTATGttaactccctcagcctcaattttcttatccctacgctgggaatattaatacctattctgaaagtttgttaaagagttaataa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112785 191 - 2193130 atcacttctccaatccc-taccagtgtgatctgcacttccc-agtaaactagtttcactggaatgctttcctcagagtctcttctgggagaaactaatctatgacaATACCCCAActctctcaccctcaattttctcatctccacaaagggaatattaatatctattttgaaagtttgttaaagaattaataa i nomLeu3.chrUn_GL397460_1 C 0 I 305 s rheMac8.chr16 30167325 191 - 77216781 atcacttccccaatccc-taccagtgtgatctgcacttccc-agtaaactactttcactggaatctttttttcagagtctcctctttgagaaacgaatctatgacaATACGTTCActctctcagcctcaaatttctcatctctacaaagggaacattaatacctattttgaaagtttgttaaagagttaataa i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28062275 191 - 80997621 atcacttccccagttcc-taccaatgtgatctgcatttccc-gataaactagtttccctggaagcttttcttcagagtctcttctgggagaaacttatctacgacaTTATGttaactccttcagtctcaattttcttatctctacgatgggaacattaatgtctattctgaaagtttgttaaagaattagtgg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2119242 177 + 10377808 ATCGCTTCCCCAATCCC-TAC------------cacttccc-agtaaactactttcactggaatctttttttcagagtctcttctatgagaaactaatctatgacaATACGTTCActctctcagcctcaaatttctcatctctacaaagggaacattaatacctattttgaaagtttgtt--agagttaacaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010557 191 - 8458610 atcacttccccagttcc-taccagtgtaatctgcatttccc-aataaactagtttccctggaatcttttcttcagcgtctcttctgggagaaACTTATCTGTGACATTATGttaactccctcagcctcaattttcttatctctaccatgggaacatgaacacctattctgaaagtttgttaaagaattaatga i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950560 191 + 75148670 atcacttccccagttcc-taccagtgtaatctgcatttccc-aataaactagtttccctggaatcttttcttcagagtctcttctgggagaaACTTATCTGTGACATTATGttaactccctcagcctcaattttcttatctctaccatgggaacatgaacacctattctgaaagtttgttaaagaattaatga i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216171 191 + 4244037 atcacttccccaatccc-tatcagtgtgatctgcacttccc-agtaaactactttcactggaatctttttttcagagtctcttctatgagaaactaatctatgacaATACGTTCActctctcagcctcaaatttctcatctctacaaagggaacattaatacttatgttgaaaaattgttaaagagttaataa i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2214966 191 + 4569836 atcacttccccagttcc-taccaatgtgatccgcatttccc-aataaactagtttccctggaatcttttcttcagagtctcttctgggagaaacttatctatgacaTTATGttaactccctcagcctcaattttcttatctctatgatgggaacattaatgcctattctgaaagtttgttaaagaattagtga i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5209 181 - 12755 atcacttccccaatccc-caccagtgtaatctgcacttcc-----caactgctttcactaggatcctttcctcagtgtctcttctgagagaaactaaactatgacaTTGTAttaactctcttagtctcagttgtctcatctctacgatgagaacattaatacctattttgaaagtttgctaaagagt------ i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884652 181 + 3513951 ----attatacaATccc-taccagtgtaatctgcacttccg-aataaactactttcactagaatcttttcctcagtgtctcttctgagagaaactaaactatgacGTTGTGttaactctcttagcctcagttgtctcatctctatgatgagaacattaatacccattttgaaagtttgctaaagaat------ i saiBol1.JH378271 I 123 C 0 s cebCap1.NW_016107543v1 20122 185 - 4077172 atcacttcctcaatccc-taccagtgtaaactgcacttccc-aatgaactactttcactagaatcttttcctcagtgtctcttctgagagaaactaaactacgacaTTGTGttaactctcttagcctcagttgtctcatctctacgatgagaacattaatacctattttgaaagtttgctaaaaaat------ i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13944 185 - 94492 atcacttccccaatccc-taccagtgtaatctgcacttcct-aataaactactttcgctagaatcttttcctcagtgtatcttctgagagaaactaaactatgacaTTGTGttaactgtcttagcctcagttgtctcatctgtaccatgagaacattaatacctattttgaaagtttgctaaagaat------ i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 590889 193 - 852752 gtcacattcccaattccttaacagtgtaatctgcacttcccaaataaatttcttaaacttgaatctttttcttggcattgcacatgggagaaaccatactacggcattactttaactctcttacccttgatttcctcatctctaaaagggagatattaatacctaccttgccagcttctttaagaatttgaga i dasNov3.JH570468 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=522503.000000 s hg38.chr17_JH159148v1_alt 54805 72 + 88070 taatgtacacaaagtgtttag-caaatacccatcctatagcaggcaatcCAGAACATATTAGTG-TTTCTTGTT s panTro5.chr17 16365694 65 + 83181570 ta---tacacaaagcatttat-ccagtacccatcatagagcaggcAACACAGAA----TTAGTG-TTTTTTGTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270893 72 + 83442489 taatgtacacaaagtgtttag-caaatacccatcctatagcaggcaatcCAGAACATATTAGTG-TTTCTTGTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117749 72 + 4267968 taatgtacacaaagtgtttag-caaatactcatcatataacaggcaatcCAGAACATATTAGTG-TTTCTTGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113281 67 - 2193130 taatgtacacaaagcatttaT-CCAATATGTCTCCTATAGCAGGCAGCCCGGAA----TTAGTG-ATT-TTGTT i nomLeu3.chrUn_GL397460_1 I 305 C 0 s rheMac8.chr16 30167516 68 - 77216781 taaggtacacaaagcacttag-ccaatacccatccgatagcaggcatcccaga----attagtG-TTTTTTTTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28062466 73 - 80997621 taatgtacagaaagcgtttag-caaatgcccatcatatagcaggcaatcCAGAACATATTAGTGTTTTTTTGTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2119419 67 + 10377808 taatgtacacaaagcatttag-ccaatacccatcagatagcaggcatcccaga----attagtg--tttttgtt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010748 73 - 8458610 taatgtacacaaagcgtttag-caaatgcccaccatatagcaggcaatcCAGAACATATTAGTGTTTGTTTGTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950751 73 + 75148670 taatgtacacaaagcgtttag-caaatgcccatcatatagcaggcaatcCAGAACATATTAGTGTTTGTTTGTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216362 69 + 4244037 taatgtatgcaaagcacttag-ccaatacccatcagatagcaggcatcccaga----attagtgtttttttgtt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215157 73 + 4569836 ttatgtacacaaagtgtttag-caaatgcccatcatatagcaggcaatcCAGAACGTATTAGTGTTTTTTTGTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5390 72 - 12755 taatgttcacaaagcatttag-ccaatacccaccatagagtaggcaacccagaacatgctggtG-TTTTTTGTT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884833 73 + 3513951 taatgtacgcaaagcatttag-caaatatgcatcatagagtaggccacccagaatatattgCTGTTTTTTTGTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20307 72 - 4077172 taatgtacacaaagcatttag-caAATATGCATCATAGTGTAGGCAACCCAGAATATATTCGTG-TTTTTTGTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14129 72 - 94492 tattgtacacaaagcatttag-aaaatacgcatcatagaataggcaacccagaatatattggtG-TTTTTTGTT i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 591082 72 - 852752 taatctatacagagcatctagtccaatatcttgtgagcagt-GGAAAACCAGAACATTTTAATT-CTTCATCTT i dasNov3.JH570468 C 0 T 57967 e canFam3.chr9 39588174 718 - 61074082 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=23880.000000 s hg38.chr17_JH159148v1_alt 54877 2 + 88070 CA s panTro5.chr17 16365759 2 + 83181570 CA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270965 2 + 83442489 CA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117821 2 + 4267968 CA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113348 2 - 2193130 CA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167584 2 - 77216781 TA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28062539 2 - 80997621 CA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2119486 2 + 10377808 CA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010821 2 - 8458610 CA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950824 2 + 75148670 CA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216431 2 + 4244037 CA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215230 2 + 4569836 CA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5462 2 - 12755 CA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884906 2 + 3513951 CA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20379 2 - 4077172 CA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14201 2 - 94492 CA i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 533187 2 - 852752 CA i dasNov3.JH570468 T 57967 I 96718 e canFam3.chr9 39588174 718 - 61074082 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=369770.000000 s hg38.chr17_JH159148v1_alt 54879 39 + 88070 GAAAATTACCAATTTTAATGTTGAAGATAGGAATATTTT s panTro5.chr17 16365761 39 + 83181570 GAAAATTCCCAAGTTTTATGTTGAAGATAAGAATATTTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16270967 39 + 83442489 GAAAATTACCTATTTTAATGTTGAAGATAGGAATATTTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117823 39 + 4267968 GAAAATTACCAATTTTAATGTTGAAGATAAGAATATTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113350 39 - 2193130 GAAAATTTCTAACTTTAATGTTGAAGATAAGAATATTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167586 39 - 77216781 GAAAATTCCTAATTTTCATGTTGAAGATAAGAATATTTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28062541 39 - 80997621 GAAAATTCCCAATTTTAATGTTGAAGATAAGAATATTTT i macFas5.chr16 C 0 M 426 s macNem1.NW_012014910v1 2119488 39 + 10377808 GAAAATTCCTAATTTTAACGTTGAAGGTAAGAATATTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010823 39 - 8458610 GAAAATTCCCAAGTTTAATGTTGAAGATAAGAATACTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950826 39 + 75148670 GAAAATTCCCAATTTTAATGTTGAAGATAAGAATACTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216433 39 + 4244037 GAAAACTCCTAATTTTCATGTTGAAGATAAGAATATTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215232 39 + 4569836 GAAAATTTCCAATTTTAATGTTGAAGATAAGAATACTTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5464 39 - 12755 GAAAGTTCCTAATTTTAACCTTGAAGATAAGAATGTTTT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884908 39 + 3513951 GAAAATTCCTAATTTTAATGTTGAAGATAAGAATATTTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20381 39 - 4077172 GAAAATTCCTAATTTCAATGTTGAAGATAAGGATATTTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14203 39 - 94492 GAAAATTCCTAATTTTAATGTTGAAGATAAGAATATTTT i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e dasNov3.JH570468 533189 96718 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=316998.000000 s hg38.chr17_JH159148v1_alt 54918 47 + 88070 TGTAATAATTAACTAGATCAACTAAATAC-TTTttttcctagctgtat s panTro5.chr17 16365800 47 + 83181570 TGTAATAATTAAATAGATCAACTAAATAC-GTTtttttctagctgtat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271006 47 + 83442489 TGTAATAATTAACTAGATCAACTAAATAC-TTtttttcctagctgtat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117862 48 + 4267968 TGTAATAATTAACTAAATCAACTAAATACTTTTttttcctagctgtat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113389 44 - 2193130 TGTAATAATTAACTAGATCAACTAAATAC----ttttcctagcagtat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167625 47 - 77216781 TGTAATAATTAACTAGATCAACTGAATAC-ATTtttttctagctgtac i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2119527 47 + 10377808 TGTAATAATTAACTAGATCAAATAAATGC-ATTtttttctagctgtat i macNem1.NW_012014910v1 C 0 I 1120 s cerAty1.NW_012006043v1 2010862 46 - 8458610 TGTAATAATTAACTAGATCAACTAAATAC--Ttttttcctatctgtac i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950865 46 + 75148670 TGTAATAATTAACTAGATCAACTAAATAC--TTttttcctatctgtac i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216472 46 + 4244037 TGTAATAATTAACTAGATCAACTAAATAC--ATtttttctagctgtac i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215271 46 + 4569836 TGTAATAATTAACTAGATCAACTAAATAC--Ttttttcctatctgtac i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5503 45 - 12755 TATAATAATTAAT-GGATCAACTAGATAC--TTttttcctagctgtac i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884947 41 + 3513951 TATAGTAATTAAC-AGATCAAC----TAC--Ttttttcctagctgtac i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20420 45 - 4077172 TATAATAGTTAAC-AGATCAACTAAATAC--TTttttcctagctatac i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14242 43 - 94492 TATAATAATTAAG-AGATCAACTAAATAC--ttttt--ctagctgtac i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e dasNov3.JH570468 533189 96718 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=484749.000000 s hg38.chr17_JH159148v1_alt 54965 60 + 88070 tgaggtataattgacaaataaaagttgtatctatttcaggtatacaaggtgatgttctg--------------------a s panTro5.chr17 16365847 60 + 83181570 tgaggtataattgacaaacaaaaattgtgtacatttcaggtatacaaggtgatgctctg--------------------a i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271053 60 + 83442489 tgaggtataattgacaaataaaagttgtatctatttcaggtatacaaggtgatgttctg--------------------a i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117910 60 + 4267968 tgaggtataattgacaaataaaagttgtatctatttcaggtatacaaggtgatgctctg--------------------a i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113433 60 - 2193130 tgaggtgtaattgacaaataaaaattgtgtctgtttcaggtatacaaggtgatgctcta--------------------a i nomLeu3.chrUn_GL397460_1 C 0 T 25005 s rheMac8.chr16 30167672 60 - 77216781 tgaggtataattgacaaatgaaaattgtgtatatttcaggtatacaaggtgatgctctg--------------------a i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2120694 60 + 10377808 tgaggtataattgacaaatgaaaattgtgtatatttcaggtatacaaggtgatgctctg--------------------a i macNem1.NW_012014910v1 I 1120 C 0 s cerAty1.NW_012006043v1 2010908 60 - 8458610 tgaggtataattgacaaatgaaaattgtgtatatttcaggtatacaaggtgatgctctg--------------------a i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950911 60 + 75148670 tgaggtctaattgacaaataaaaatcgtatctatttcaggtatacaaggtgatgctctg--------------------a i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216518 60 + 4244037 tgaggtataattgacaaatgaaaattgtgtatatttcaggtatacaaggtgatgctctg--------------------a i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215317 60 + 4569836 tgaggtataattgacaaataaaaatcgtatctatttcaggtatacaaggtgatgctctg--------------------a i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5548 69 - 12755 tgaggaataattgacaaataaaaattattcatatttcaggtatacaaggtgat-ctctg----------atatatatata i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1884988 80 + 3513951 tgaggaataactgacaaataaaaattattcatatttcaggtatacaaggtgatgctctgatatatatatatatatatata i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20465 60 - 4077172 tgaggaataattgacaaataaaaattattcatatttcaggtacacaaggtgatgctctg--------------------a i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14285 60 - 94492 tgaggaataattgacaaataaaaattattcatatttcaggtatacaaggtgatgctctg--------------------a i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e dasNov3.JH570468 533189 96718 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=663890.000000 s hg38.chr17_JH159148v1_alt 55025 85 + 88070 tatatatattccttgtga---ataatatgtttattaggtcacgaagctaccatttccttttaatttttgtggtgtgaacatttaagat s panTro5.chr17 16365907 85 + 83181570 tatagatattcattgtga---ataacatatttattaggtcacttagttaccatttcctttttatttttctggtgtgaacatttaagat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271113 85 + 83442489 tatatatattccttgtga---ataatatgtttattaggtcacgaagctaccatttccttttaatttttgtggtgtgaacatttaagat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4117970 85 + 4267968 tatatatattccttgtga---ataatatgtttattaggtcacgaagctaccatttccttttaatttttgtggtgtgaacatttaagat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088488 88 - 2193130 tatatatacttattgtgaatcatcatatattccttagctcacatagttaccatttcctttttatttttgtggtgtgaacacttcaaat i nomLeu3.chrUn_GL397460_1 T 25005 C 0 s rheMac8.chr16 30167732 85 - 77216781 tatatatattcattgtaa---atagcatatttattaggtcacgtagttaccatttcctttttatttttgtggtgtgaacatttaagat i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2120754 85 + 10377808 tatatatattcattgtaa---atagcatatttattaggtcacatagttaccatttcctttttatttttgtggtgtggacatttaagat i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2010968 85 - 8458610 tacatatattcattgtga---ataatatatttgttaggtcacttagttaccatttcctttgtatttttgtggtgcgaacatttaagat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64950971 85 + 75148670 tacatatattcattgtga---ataatatatttgttaggtcacttagttaccatttcctttttatttttgtggtgcgaacatttaagat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216578 85 + 4244037 tatatatattcattgtga---atagcatatttactaggtcatgtagttaccatttcctttttatttttgtggtgtgaacattcaagat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215377 85 + 4569836 tacatatattcattgtga---ataatatatttcttaggtcacttagttaccatttcctttttatttttgtggtgcgaatatttaagat i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5617 85 - 12755 tatatatattcattgtga---ataacatctttatcagctcgtgtagtcaccatttcttttttatttttatggtgtgaacatttaagat i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885068 85 + 3513951 tatatatatacattgtga---attacatctttattagctcacatagataccatttcctttttatttttatgatgtgagcatttaagat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20525 85 - 4077172 tatatatattcattgtga---atgacatctttattagctcacgtggttaccatttcctttttatttttatggtgtgaacattgaagat i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14345 85 - 94492 tatatatattcattgtga---ataacatctttattagctcacatagttgccatttcctttttatttttatggtgtgaacatttaagat i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e dasNov3.JH570468 533189 96718 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=793691.000000 s hg38.chr17_JH159148v1_alt 55110 113 + 88070 ctaccttcttggtaaatttcaggtatatgataaag---tgttattaactatagtcacattac----tgtacagtagacatgctgaacttattcatctttcataaatgaTGCTAGTCAAAG s panTro5.chr17 16365992 113 + 83181570 ctaccttctcagtaaatttcaggtatatgataaag---tgtttttaactatagtcatattac----tgtacattagacctactgaacttattcatctttcataactgaTGCTAGTCAAAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271198 113 + 83442489 ctaccttcttggtaaatttcaggtatatgatgaag---tgttattaactatagtcacattac----tgtacagtagacatgctgaacttattcatctttcataaatgaTGCTAGTCAAAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118055 113 + 4267968 ctaccttcttggtaaatttcaggtatatgataaag---tgttattaactatagtcacattac----tgtacagtagacatgctgaacttattcatctttcataaatgaTGCTAGTCAAAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088576 116 - 2193130 ctaccttcttagcacatttcaggtataaaataaagcatttttgttaactatagtcacgttgc----tgtacactagatctgcagaactgactcagcttgcataactgaTGTTGGTCAAAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167817 112 - 77216781 ctaccttctcagttaatttcagatatatgataaag---tgtttttcgctatagtcacattac----tgtacattagaaatgctgaacttattcatgtttcataactgaTGCTATTC-AAG i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2120839 112 + 10377808 gtaacttctcagttaatttcagatatatgataata---tgtttttaactatagtcacattgc----tgtacattagacatgctaaacttattcatctttcataactgaTGCTAGTC-AAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011053 113 - 8458610 ctaacttctcggtaaacttcagctatatgataaag---tgtttttaactatagtcacattac----tgtacagtagatgtgctgaactgattcatctttcataactgaTGCTGGTCAAAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951056 113 + 75148670 ctaacttcttggtaaacttcagctatatgataaag---tgtttttagctatagtcacattac----tgtacagtagatgtgctgaactgattcatctttcataactgaTGCTGGTCAAAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216663 112 + 4244037 ctaccttctcagttaatttcagatatatgataata---tgtttttaactatagtcacattac----tgtacattagaaatgctgaacttattcatctttcataactgaTGCTATTC-AAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215462 107 + 4569836 ctaacttctcggtaaacttcagctatatgataaag---tgtttt------tagtcacattac----tgtacagtagacgtgctgaactgattcatctttcataactgaTGCTGGTCAAAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5702 113 - 12755 ctaccttctcagcaaatttcaagtatatgataaag---tatttttagctgtagtcacattac----cgtacagtagacatgctgagcttattcatcttgcatagctaaTGTTAGTCAAAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885153 113 + 3513951 ataacttctgagcaaatttcaggtacacgataaag---tatttttaactgtagtcacattac----tatacagtagacatgctgagcttattcatcttgcatagctaaTGTTAGTCAAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20610 113 - 4077172 ataccttctcagcaaatttcaggtacatgataaag---tatttttaactatagtcacattac----cgtacagtagacatgctgagcttattcatcttgcgtagctaaTGTTAATCAAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14430 112 - 94492 ttactttctcagcaagtttcaggcatatgataaag---catttttaactgcagtcacattac----catacagtagacatgctgagcttatt-atcttgcatagctgaTGTCAGTCAAAG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 629907 73 - 852752 ctagcttcttcaagaatttgagataatctatacag---agcatc------tagtc-caataccttgtgagcagtGGACAAACC------------------------------------- i dasNov3.JH570468 I 96718 T 96763 e canFam3.chr9 39588174 718 - 61074082 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=116921.000000 s hg38.chr17_JH159148v1_alt 55223 14 + 88070 AGAATGTCCTAGTT- s panTro5.chr17 16366105 14 + 83181570 AGAATGTCCTAGTT- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271311 14 + 83442489 AGAATGTCCTAGTT- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118168 14 + 4267968 AGAATGTCCTAGTT- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088692 15 - 2193130 AGAATGTGATAGTTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167929 14 - 77216781 AGAATGTCCTAGCT- i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2120951 14 + 10377808 AGAATGTCCTAGTT- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011166 14 - 8458610 AGAATGTCCTAGTT- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951169 14 + 75148670 AGAATGTCCTAGTT- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216775 14 + 4244037 AGAATGTCCTAGTT- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215569 14 + 4569836 AGAATGTCCTAGTT- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5815 14 - 12755 AGAATGTCCTAGTT- i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885266 14 + 3513951 AGAATGTCCTAGTA- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20723 14 - 4077172 AGAATAGCCTAGTT- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14542 14 - 94492 AGAATGTCCTAGTT- i aotNan1.NW_018505111v1 C 0 C 0 e canFam3.chr9 39588174 718 - 61074082 I e dasNov3.JH570468 629980 96763 - 852752 T e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=396915.000000 s hg38.chr17_JH159148v1_alt 55237 53 + 88070 TTCATCTCCTTTA---------CTTCAACCCTGAACGATGATCACAGTAAGTGGC-CGTTGTC s panTro5.chr17 16366119 53 + 83181570 TTCATCTCCTTTA---------CTTCATCCCTGAACGATGATGACAGTAGGTGGC-TGTTGTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271325 53 + 83442489 TTCATCTCCTTTA---------CTTCATCCCTGAACGATGATCACAGTAAGTGGC-CCTTGTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118182 53 + 4267968 TTCATCTCCTTTA---------CTTCATCCCTGAACGATGATCACAGTAAGTGGC-CGTTGTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088707 53 - 2193130 TTCAGCTTCTTTA---------CCCCATTATGCAACAACTATCACAGTCAGTGGC-TTTTGTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167943 53 - 77216781 TTCATCTCCTTTA---------CTTCATCCCTGAACGATGATCACAGTAAGTGGC-CGTTATC i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2120965 53 + 10377808 TTCATCTCCTTTA---------CTTCATCCCTGAATGATGATCACAGTAAGTGGC-CGTTATC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011180 53 - 8458610 TTCATCTCCTTTA---------TTTCATCACCAAACGATGATCACAGTAAGCAGC-CTTCGTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951183 53 + 75148670 TTCATCTCCTTTA---------TTTCATCACCAAATGATGATTACAGTAAGTGGC-CTTCGTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216789 53 + 4244037 TTCATCTCCTTTA---------CTTCACCCCTGAACGATGATCACAGTAAGTGGC-CGTTATC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215583 53 + 4569836 TTCATCTCCTTTA---------TTTCATCACCGAGCGATGATCACAGTAAGCGGC-CTTCGTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5829 53 - 12755 CTCATCTCCTTTA---------CTTCATCACTGAACGATGATCACCGTAAGCGGT-CCTTGTC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885280 53 + 3513951 CTCCTCTCCTTTA---------TTTCATCACTGAACAATGATCACAGTAAGTGGC-CTTTGTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20737 53 - 4077172 TTCATCTCCTTTA---------CTTCATCACTGAACGTTGATCACAGTAACTGGC-CTTTGTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14556 53 - 94492 CTTATCTCATTTA---------CTTCATCACTAAACGATGATCACAGTAAGCGGC-CTTTGTC i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39588892 58 - 61074082 TTCCTCACCTCTGAATGCAAACCCCCATCTCTGAATGAC-----CAGCAGGAGGCACAACTGG i canFam3.chr9 I 718 C 0 e dasNov3.JH570468 629980 96763 - 852752 T e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=132683.000000 s hg38.chr17_JH159148v1_alt 55290 13 + 88070 TCTTAGCCAAGTC s panTro5.chr17 16366172 13 + 83181570 TCTTAGCCAAGTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271378 13 + 83442489 TCTTAGCCAAGTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118235 13 + 4267968 TGTTAGCCAAGTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088760 13 - 2193130 TCTTAGCTGAGTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30167996 13 - 77216781 TCTTAGCCAAGTC i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121018 13 + 10377808 TCTTAGCCAAGTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011233 13 - 8458610 TCTTAGCCAAGTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951236 13 + 75148670 TCTTAGCCAAGTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216842 13 + 4244037 TCTTAGCCAAGTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215636 13 + 4569836 TCTTAGCCAAGTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5882 13 - 12755 TCTTAGCCAAGTC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885333 13 + 3513951 TCTTAGCCAAGTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20790 13 - 4077172 TGTTAGCCAAGTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14609 13 - 94492 TCTTAGCCAAGTC i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 39588950 11 - 61074082 TCTTGGC--AGCC i canFam3.chr9 C 0 n 0 s dasNov3.JH570468 533217 13 - 852752 TCTTGACTGACTC i dasNov3.JH570468 T 96763 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=721444.000000 s hg38.chr17_JH159148v1_alt 55303 91 + 88070 TTCAGAGCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTTTTAGCTGATCAGAGGTAA------------------------TTCTAGCACTCCA s panTro5.chr17 16366185 91 + 83181570 TTCAGAGCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTGTTAGCTCATCAGAGGTAT------------------------TTCTACCACTCCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271391 91 + 83442489 TTCAGAGCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTTTTAGCTGATCAGAGGTAC------------------------TTCTAGCACTCCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118248 91 + 4267968 TTCAGAGCATTCTAGATTCATAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTTTTAGCTGATCAGAGGTAC------------------------TTCTAGCACTCCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088773 91 - 2193130 TTCTGAGCATTCTAGATACATTGCCTCAGAAGCTGGTGTCTGTCCTGGAAACCTACATTGTTAGCTCCTCAGAGGTAT------------------------TTCTACCACTCCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168009 112 - 77216781 TTCAGAGCA-TCTAGATT--CAGTTTCAAAAGTTGGCATCTGTCATGGAAATCCACATTGTTAGCTCATCAGAGGTATGAGCTCATCAGAGCTCATCAGAGGTACCAGCACTCCC i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121031 90 + 10377808 TTCAGAGCA-TCTACATTCACAGTCTCAAAAGTTGGCATCTGTCATGGAAATCCACATTGTTAGCTCATCAGAGGTAT------------------------TTCCACCACTCCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011246 89 - 8458610 TTCAGCGCATTCTAGATT--CAGTCTCAGAAGTTTGCATCTGTCATGGAAATCCCCATTGTTAGCTCATCAGAGGTAC------------------------TTCTAGCACTCCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951249 89 + 75148670 TTCAGCGCATTCTAGATT--CAGTCTCAGAAGTTTGCATCTGTCATGGAAATCCCCATTGTTAGCTCATCAGAGGTAC------------------------TTCTAGCACTCCC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216855 90 + 4244037 TTCAGAACA-TCTAGATTCACAGTCTCAAAAGTTGGCATCTGTCATGGAAATCCACACTGTTAGCTCATCAGAGGTAT------------------------TTCCACCACTCCC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215649 89 + 4569836 TTCAGCGCATTCTAGATT--CAGTCTCAGAAGTTCGCATCTGTCATGGAAATCTACATTGTTAGCTGATCAGAGGTAC------------------------TTCTAGCACTTCC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5895 91 - 12755 TTCAGAGCATTCTAGATTCACAGTCTCAGAAGTCGGCATCTGCCATGGAAATCTACATTGATGGCTCATCAGAGGTAT------------------------TTCTACCGCTCCC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885346 91 + 3513951 TTCAGAACATTTTAGATTCACAGTCTCAGAAGTCGGCATCTGTCATGGAAATCTACATAGGTAGCTCATCAGATGTAT------------------------TTCTACCACTCCC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20803 91 - 4077172 TTCAGAGCATTCTAGATTCGCAGTATCAGAAGCTGGCATCTGTCATGGAAATCTACATTGGTAGCTCATCAGATATAT------------------------TTCTACCACTCCC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14622 91 - 94492 TTCAGAGCATTCTAGATTCACAGTCTCAGAAGCTGGCATCTGTCATGGAAATCTACACTGGTAGCTCATCAGAGGTAT------------------------TTCTACCACTCCC i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21519874 91 + 61074082 TCCAGAGCCTCCTGGAGAGCAAGTCTCCAATGTTGGAGTGTGCCTGGGGCAGGAGCCTTCCTAGCTCTACAAAGGTCC------------------------CTCTAGGGCTCCC i canFam3.chr9 I 15749 C 0 s dasNov3.JH570468 533230 90 - 852752 CTCAAAGCCTTCCAGGCACACAAT-TCTGGATATGGTGTTTTCCCCTTATACAAATACCATTAGCTCATCAGAGATAC------------------------TTTAAAGTCTCTA i dasNov3.JH570468 C 0 I 58430 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=267939.000000 s hg38.chr17_JH159148v1_alt 55394 31 + 88070 GTGCT-GGTAGGAGGTCCGAAGAAGGTGACCC s panTro5.chr17 16366276 31 + 83181570 CTGTT-GGTAGGAGGCCCCAAGAAGGTGCCCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271482 31 + 83442489 ATGCT-GGTAGGAGGTCCGAAGAAGGTGACCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118339 31 + 4267968 ATGCT-GGTAGGAGGTCTGAAGAAGGTGACCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088864 31 - 2193130 ATGCT-GGTAGGAGGTCCCAAGAAGGCGGCCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168121 31 - 77216781 ATGCT-GGTAGGAGATCCCAAGAAGGTGATCC i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121121 31 + 10377808 ATGCT-GGTAGGAGGTCCCAAGAAGGTGACCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011335 31 - 8458610 ATGCT-GGTAGGAGGTCCCACGAAGGTGACCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951338 31 + 75148670 ATGCT-GGTAGGAGGTCCCAAGAAGGTGACCC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216945 31 + 4244037 ATGCT-GGTAGGAGGTCCCAAGAAGGTGACCC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215738 31 + 4569836 ATGCT-GGTAGGAGGTCCCAAGAAGGTGACCC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 5986 31 - 12755 ATGCT-GGTAGGAGGTCCCAAGAAGGTGACCC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885437 32 + 3513951 ATGCTGGGTTGGAGGTCCCAAGAAGGTGACCC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20894 31 - 4077172 ATGCT-GGTAGGAGGTCCCAAGAAGGTGACCC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14713 31 - 94492 ATGCT-GGTAGGAGGTCCCAAGAAGGCGACCC i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21519965 12 + 61074082 A-----GG---------------AGGTGACCC i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 533320 58430 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=812714.000000 s hg38.chr17_JH159148v1_alt 55425 104 + 88070 AGGTCCCCAACTTTTATATTTCTCTCAGAGCCTGTATCAATCAATCTTTCCATGGGTGAATGCTTAGCTTA---CATCGG---TTCAGGACCCAAAGCACTAACC-TCTGT s panTro5.chr17 16366307 104 + 83181570 AGGTCCCCAACTTTTCAATTTCTCTCAGAGCCAGCATCAATCAATCCTTTCATGAGTGAATGGTTATCTTA---CATCAG---TTCAGGACCCGAAGCACCAACC-TCTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271513 104 + 83442489 AGGTCCCCAACCTTTATATTTCTCTCAGAGCCTGTATCAATCAATCTTTCCATGGGTGAATGCTTAGCTTA---CGTCGG---TTCAGGACCCAAAGCACTAAAC-TCTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118370 104 + 4267968 AGGTCCCCAACCTTTATATTTCTCTCAGAGCCTGTATCAATCAATCTTTCCATGGGTGAATGCTTAGCTTA---CATCGG---TTCAGGACCCAAAGCACTAACC-TCTGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2088895 108 - 2193130 AGGTCCCTAACTTTTCTAATTCTCTCAGAGCCAGTATCAATGAATCCCTCCATGACTGAATACTTCAGTTGCATCATCAG---TTCAGGAACAAAAGCACCAATCTTCCAT i nomLeu3.chrUn_GL397460_1 C 0 I 19134 s rheMac8.chr16 30168152 104 - 77216781 AGGTCCCCGACTTTTCAATTTCTCTCAGAGCCAGTAGCAATCAATCCTTACATGAGTGAATGCTTATCTTA---CATCAG---TTCAGGACCCGAAGCACCAACC-TCTGT i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121152 104 + 10377808 AGGTCCCCGACTTTTCAATTTCTCTCAGAGTCAGCATCAATCAATCCTTACATGAGTGAATGCTTATCTTA---CATCAG---TTCAGGACCCGAAGCACCAACC-TCTGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011366 104 - 8458610 AGGTCCCCGACCTTTATATTTCTCTCAGAGCCAGTATCAATCAATCATTCCGTGGGTGAATGCTTAACTTA---CATCAG---TTCAGGACACAAAGTATCAACC-TCTGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951369 104 + 75148670 AGGTCCCCGACCTTTATATTTCTCCCAGAGCCAGTATCAATCAATCATTCCGTGGGTGAATGCTTAACTTA---CATCAG---TTCAGGACACAAAGCATCAACC-TCTGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2216976 104 + 4244037 AGGTCCCCAACTTTTCAATTTCTCTCAGAGTCAGCATCAATCAATCCTCACGCAAGTGAATGCTTATCTTA---CATCAG---TTCAGGACCCGAAGCACCAACC-TCTGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215769 104 + 4569836 AGGTCCCCGACCTTTATATTTCTCTCAGAGCCAGTATCAATCAATCATTCCGTGGGTGAATGCTTAGCTTA---CATCAG---TTCAGGACACAAAGCATCAACC-TCTGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6017 104 - 12755 AGGTCTCCAATTTTTCTATTTCTCTCAGGGCCACGATTAATCAATCCTTCCATAAGTGAATGCTTCGCCTC---CATCAG---CTCAGGACCAAAAGCACTAACC-TCTGT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885469 104 + 3513951 AGGTGCCTGACTTTTCTATTTCTCTCAGGGCCATGATTAATCAATCCTTCCATAAGTGAATGCTTAGCTTG---TATCAG---CTCAGGACCAAAAGCACCAACC-TCTGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20925 104 - 4077172 AGATCCCCGACTTTTCTATTTCTCTCAGAGCCATGATTAATCAATCCTTCCATAAGTGAATGCTTAGCTTG---CATCAG---CTCAGGACCAAAAGCACCAATC-TCTGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14744 104 - 94492 AGGTCCCCGACTTTTCTATTTCACTCAGGGCCATGATTAATCAGTCCTTCCATAAGTGAATGCTTAGCTCG---CATCAG---CTCAGGACCGAAAGCACCAACC-TCTGT i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21519977 103 + 61074082 AGG-GCCTAGGTCTCCTCTTCCTCTCAAAGCCTG----AATCAAACCTCAGATACCTTAGTATCAAGGCAGCACCATTAG---TTCAGGAGCAGAAGTGCCAGCCCTTTGT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 591750 103 - 852752 AAGTCTCTAGCCCTTCTATTACTCCCA-AGCCAGTACAAGACTAT----ACACTAACGAATGCTGATGTAG---CATCTTTTCTTCATGACAGAATGCACCAGTGTTCTGT i dasNov3.JH570468 I 58430 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=1349037.000000 s hg38.chr17_JH159148v1_alt 55529 158 + 88070 CTATTATGACTTCTATGAATGCACAAGTTCTACT---TTGCTCCTTTCTTACATTCTTCTGATTTCCCTGGAAACACAAGTTTTTCATTTCTTTGAATGCTTCCTATTGGCCTCACAA-AATGCAGAAGGCTGTTTCATTCCCTTACTTGGCTCAGAGATTA s panTro5.chr17 16366411 158 + 83181570 CTATTATGTCTTCTATGAATGCACAAGTTCTACC---TTGCTCCTTTCTTACATTCTTCTGATTTCCGTGGAAACAGAAGTTTTTCATTTCTTTAGATTCTTCATATTGGCCTCACAA-AATGTGGAAGGTTGTTTTATTCCGTTCCTTAGCTCAGAGATTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271617 158 + 83442489 CTATTATGACTTCTATGAATGCACAAGTTCTACT---TTGCTCCTTTCTTACATTCTTCTGATTTCCCTGGAAACACAAGTTTTTCATTTCTTTGAATGCTTCCTATTGGCCTCACAA-AATGCAGAAGGCTGTTTCATTCCCTTACTTGGCTCAGAGATTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118474 158 + 4267968 CTATTATGACTTCTATGAATGCACAAGTTCTACT---TTGCTCCTTTCTTACATTCTTCTGATTTCCCTGGAAACACAAGTTTTTCATTTCTTTGAATGCTTCCTATTGGCCTCACAA-AATGCAAAAGGCTGTTTCATTCCCTTACTTGGCTCAGAGATTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108137 158 - 2193130 cTATCATGACTTCTATGAATGCAGAAGTTCTACT---TTGCTCCTTTCTTACATTATTTTGATTTCCCTGAAAATACAAGTGTTTTGTTTCTTTAGATGGTTCATATTGTCCTCAAAA-ACTGCAGAAGGTTGTTTCATTCCCTTCCTTCTCTCAGAGATAA i nomLeu3.chrUn_GL397460_1 I 19134 C 0 s rheMac8.chr16 30168256 156 - 77216781 CTATCATGACTTCTATGAAGGCACAAGTTCTACT---TTGCTCCTTTCTTACCTTCTTCTGATTTCCCTGGAAACAAAAGTTTTTTGTTTCTTTAGATGCTTCATATTGGCCTCACAA-AATGT-GAAGGTTGTTTTATTCCC-TCCTCGGCTCAGAGATTA i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121256 156 + 10377808 CTATCATGACTTCTATGAAGGCACAAGTTCTACT---TTGCTCCTTTCTTGCCTTCTTCTGATTTCCCTGGAAACAAAAGTTTTTTGTTTCTTTAGATGCTTCATATTGGCCTCACAA-AATGT-GAAGGTTGTTTTATTCCC-TCCTCGGCTCAGAGATTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011470 158 - 8458610 CTAGTATGACTTCTATGAAGGCACAAGTTCTACT---TTGCTCCTTTCTTACCTTCTTCTGATTTTCCTGGAAACACAAGTTTTTCATTTCTTTAGATGCTTCATATTGGCATCACAA-ATTGCAGAAGGCTGTTTCTTTCCCTTCCTTGGCTCAGAGATTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951473 158 + 75148670 CTATTATGACTTCTACGAATGCACAAGTTCTACT---TTGCTCCTTTCTTACATTCTTCTGATTTTCCTGGAAACACAAGTTTTTCATTTCTTTAGATGCTTCATATTGGCATCACAA-AATGCAGAAGACTGTTTCTTTCCCTTCCTTGGCTCAGAGATTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217080 156 + 4244037 CTATCATGACTTCTATGAAGGCACAAGTTCTACT---TTGCTCCTTTCTTGCCTTCTTCTGATTTCCCTGGAAGCAAAAGTTTTTTGTTTCTTTAGATGCTTCATATTGGCCTCACAA-AATGT-GAAGGTTGTTTTATTCCC-TCCTCGGCTCAGAGATTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2215873 158 + 4569836 CTATTATGACTTCTATGAATGCACAAGTTCTACT---TTGCTCCTTTCTTACATTCTTCTGATTTTCCTGGAAACACAAGTCTTTCATTTCTTTAGATGCTTCATATTGGCATCACAA-AATACGGAAGGCTGTTTCTTTCCCTTCCTCAGCTCAGAGATTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6121 158 - 12755 CTATCATGGCTTCTACGTATGCACAAGTTCTACT---TTTCTCCTTTCTTACATTCTTCTGATTTCCCTGGAAACACAAGATTTTAGTTTCTTTAGATGCTTCATGTTGGCCTCATGA-AATGGAGAAGTTTGTTTTATTCCCTTCCTTGGCTCAGAGATTA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885573 154 + 3513951 CTATCATGGCTTCTATGAATGCACAAGTTCTACT---TTTCTCCTTTCTTATGTTCTTCTGATTTCCCTGGAAACACGAGATTTTAGTTTCTGTAGTTGCTTCATGTTGGTCTCACAA-AATGCAGAA----GGTTTATTCCCTTCCTTGGCTCAGAGATCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21029 158 - 4077172 CTATCATGGTTTCTAAGAATGCACAAGTTCTACT---TTTCTCCTTTCTTACATTCTTCTGATTTCCCTGAAAACACAAGATTTTAGTTTCTTTGGATGCTTCATGTTGGCCTCACAA-AATGCAGACGGTTGTTTTATTCCCTTCCTTGGCTCAGAGATTA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14848 150 - 94492 CTATCATGGTTTCTATGAATGCACAAGTTCTGCT---TTTCTCTTTTCTTACATTCTTCTGATTTCCCTGGAAACAC--------AGTTTCTTTAGATGCTTCATGTTGGCCTCACAA-AATGCAGAAGGTTGTTTTATTCCCTTCCTTGGCTCAGAGATCA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520080 160 + 61074082 CTATCATGACTCCTATGAATGCCCACATTCTTTTCTCTTTCTTCTTCCTCATATTTGTCCCATCCCCCTAGAA-CAGGCAGCTTTCTTTCCCTCCAATGCTTCACAGTTCCTGCACCA-AATGCCAGAGATTGTTTTGTTCCCTTCTATGATTCAGAGGTCC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 591853 157 - 852752 CTGTCAAAACTCTGATGAGTGCACGGTTTTT--T---CCACTTTTTCTCCATATTTATTTTTTTCCTATGGAAACATGAGCTTTTATTTCCCTCAAATACTTCATTTTTACCTCAAGAGAACAACGGCAGTTGTTTAGTTTTCTTAGACAGTCTAGAGATTG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28062580 426 - 80997621 M a score=234988.000000 s hg38.chr17_JH159148v1_alt 55687 21 + 88070 TGGATTGTGCCAAG---TCTTACA s panTro5.chr17 16366569 21 + 83181570 TGGGTTGTGCCAAG---TCTTACA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271775 21 + 83442489 TGGATTGTGCCAAG---TCTTACA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118632 21 + 4267968 TGGATTGTGCCAAG---TCTTACA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108295 21 - 2193130 TGGATTGTGCCAAG---TCTTACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168412 21 - 77216781 TGGATTGTGCCAAG---TCGTACA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063006 21 - 80997621 TGGATTGTGCCAAG---TCTTACA i macFas5.chr16 M 426 C 0 s macNem1.NW_012014910v1 2121412 21 + 10377808 TGGATTGTGCCAAG---TCGTACA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011628 21 - 8458610 TGGATTGTGCCAAG---TCTTACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951631 21 + 75148670 CGGATTGTGCCAAG---TCTTATA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217236 21 + 4244037 CGGATTGTGCCAAG---TCGTACA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216031 21 + 4569836 TGGATTGTGCCAAG---TCTTACA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6279 21 - 12755 TGGATTGTGCCAAG---TCTTACA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1885727 21 + 3513951 TGTATTGTGCCAAG---ACTTACA i saiBol1.JH378271 C 0 T 18681 s cebCap1.NW_016107543v1 21187 21 - 4077172 TGGATTGTGCCAAG---TCTTACA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14998 21 - 94492 TGGATTGTGCCAAG---TCTTACA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520240 24 + 61074082 TGCATTACTCCAAGTCATCATACA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592010 21 - 852752 TGAATTGATCAAAA---TCACTCA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=1689891.000000 s hg38.chr17_JH159148v1_alt 55708 199 + 88070 TGCCCATTGTGTAGTTTCTCAATTCTCA-GCTTTGTTCTTACATAATTTCCCTCATAACA-TTACAATTA-GGGGACAAATTGTCTTAATG-TGGCAAAATGTATGGTCTGCATTTTACAAGAAATAACTTAGTTTCATT-TACTTCATCAATAGGTATTCAGGAGATGAAGGCTGTATAAGTATTTTATTTACATGATATTGA s panTro5.chr17 16366590 199 + 83181570 TGCCCATTGCATAGTTTCTCAATTCCCA-GCTTTGTTCTTACATAATTTTACTCATAACA-CTTCAAGTA-GGGGACAAATTGTCTTAACG-TGGCATAATGTATGGTCTGTGTTTTACAAGGAATAACTTAGTTTCATT-TACTTTGTCAATAGGTATTCAGGAGACCGATGCTGTATAAGAATTTTATTTACATCACACTGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271796 199 + 83442489 TGCCCATTGTGTAGTTTCTCAATTCTCA-GCTTTGTTCTTACATAATTTCCCTCATAACA-TTTCAATTA-GGGGACAAATTGTCTTAATG-TGGCAAAATGTATGGTCTGTATTTTACAAGAAATAACTTAGTTTCATT-TACTTCATCAATAGGTATTCAGGAGATGAAGGCTGTATAAGTATTTTATTTACATGATATTGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118653 198 + 4267968 TGCCCATTGTGTAGTTTCTCAATTCTCA-GCTTTGTTCTTACATAATTTCCCTCATAACA-TTTCAATTA-GGGGACAAATTGTCTTAATG-TGGCA-AATGTATGGTCTGTATTTTACAAGAAATAACTTAGTTTCATT-TACTTCATCAATAGGTATTCAGGAGATGAAGGCTGTATAAGTATTTTATTTACATGATACTGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108316 195 - 2193130 TGCCCATGGCATACTTTCTCAATTCCCA-GCTTTGTTCT----TAATTTTCCTCATAACA-TTTCAATTA-GGGGACAAATTTTCTTAATG-TGGCATAAGGTACAGTCTGTATTTTACAAGGAATAACTTGGTTTCATT-TACTTTGTCAATAGGTATTCAGGAGACAGAGGCCATATAACAATTTTATTTACATGATATCGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168433 199 - 77216781 CGCCCAGTGTGCAGTTTCTCAGTTCTCA-GCTTTGTTCTTAGTTAATTTTCCTCATAAGA-TTTCAAGTA-GGGGACAAATTGTCTTAATG-TGGCATAATGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATT-TACTTCATCAATAGGTATTCAGAAGACAGAGGCTGCATAAACATTTTATTTACATGATACTGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063027 199 - 80997621 TGCCCATTGAGTAGTTTCTCAATTCCCA-GCTTTGTTCTTACATAATTTTCCTCATAACA-TTTCAATTA-GGGGACAGATGGTCTTAATG-TGGCAAAAGATATGGTCTGTATTTTACAAGAAATAACTCAGTTTCATT-TACTTTGTCAATAGGTATTCAGGAGATGAAGGCTGTATAAGAATTTTATTTACATGATATTGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121433 198 + 10377808 CGCCCAGTGTGTAGTTTGTCAGTTCTCA-GCTTTGTTCTTAGTTAATTTTCCTCATAAGA-TTTCAAGTA-GGGGACAAATTGTCTTAATG-TGGCATAATGTATGGTCTGTATGTTACAAGGAATAGCTTAGTTTCATT-TAATTTGTCAATAGGTATCCAGGACA-GGGGGCCGTATAAATATTTTATTTATATGATACCAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011649 199 - 8458610 TGCCCATTGAGTAGTTTCTCAATTCCCA-ACTTTGTTCTTACATAATTTTCCTCATAACA-TTTCAATTA-GGGGACAAATTGTCTTAATG-TGGCAAAAGATACGGTCTGTATTTTACAAGAAATAACTTAGTTTCATT-TACTTTGTCAATGGGTATTCAGGAGATGAAGGCTGTATAAGAATTTTATTTGCATGATATCGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951652 199 + 75148670 TGCCCATTGAATAGTTTCTCAATTCCCA-GCTTTGTTCTTACATAATTTTCCTCATAACA-TTTCAATTA-GGGGACAAATTGTCTTAATG-TGGCAAAAGATACGGTCTGTATTTTACAAGAAATAACTTAGTTTCATT-TACTTTCTCAATAGGTATTCAGGAGATGAAGGCTGTATAAGAATTTTATTTACATGATATCGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217257 198 + 4244037 TGCCCAGTGTGTAGTTTCTCAGTTCTCA-GCTTTGTTCTTAGTTAATTTTCCTCATAAGA-TTTCAAGTA-GGGGACAAATTGTCTTAATG-TGGCATAATGTATGGTCTGTATTTTACAAGGAATAGCTTAGTTTCATT-TAATTTGTCAATAGATATCCAGGACA-GGGGGCCGTATAAATATTTTATTTATATGATACCAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216052 199 + 4569836 TGCCCATTGAGTAGTTTCTCAATTCCCA-GTTTTGTTCTTACATAATTTTCCTCATAACA-TTTCAATTA-GGGGACAAATTGTCTTAATG-TGGCATAATGTATGGTCTGTATTTTACAAGAAATAACTTAGTTTCATT-TACTTTGTCAATAGGTATTCAGGAGATGAAGGCTGTATAAGAATTTTATTTACATGATATGGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6300 195 - 12755 TGCCCATTGCATAGTTTCTCAATTCCCA-GCTTTGTTCT----TGATTTTCCTCATAACA-TTTCAATTA-GGAGACAGATAGTCTTCATG-TGGCATAATGTGTGGTCTGTATTTTACAAGGAATAACTTAGTTTTCTT-TACTTTGTCAATAGATATTCAGGAGATGAGGGCCATATAAGAATTCTATTTACATGATACCAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1867067 195 + 3513951 TGCCCACTCGATAGTCCCTCAATCCCTA-AATATGTTTT-ACATAATTTTCCTAGTAACAGTTTGATTTC-AGGGACAATTTGACTTAATG-TTGCTTAATGCATTGTCCACATTTTAGAGGAAATAATTTCGT----TT-TGCTTTGTCAACAGGTATCCAGGAGAGGGAAGCCATATACGAATATTATTTACATGATATAAA i saiBol1.JH378271 T 18681 I 6421 s cebCap1.NW_016107543v1 21208 199 - 4077172 TGTCCATTGCGTAGTTTCTCAATTCCCA-GCTTTGTTTTTACTTAATTTTTCTTGTAACA-TTTCAATTA-GTGGACAGATACTCTTCATG-TGGCATAATGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTTATT-TACTTTTTCAATAGATATTCAGGAGATGGGGGCCATATAAGAATTTTATTTACATGATACCAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15019 199 - 94492 CGCCCATTGCATAGTTTCTCAATTCCCA-GCTTTGTTCTTACTTAATTTTCCTCATAACG-TTTCAATTA-GGGGACAGATAGTCTTCATG-TGGCATAATGTATGGTCTGTATTTTACAAGGAGTAACTTAGTTTTATT-TAATTTGTCAATAGATATTCAGAAGATGGGAGCCATATAAGAATTTTATCTATATGATACCAA i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520264 195 + 61074082 TGCCCACTGCACAGGCGCTTGGTCCGAG-ATCTTCCCCTTCCTTCCTTTTCTTGGGGACA-TGTTGATCATAATGCCAAATTACATTCCAG-CTG----GGGAGCAGGATGTGTTTGGCAGAAAGTTGCCTGATGCCTCTGGACAATGCCAAGAGGTCCTGAGCACCAGGAAGGCATACCAGAAGGGGTCTTCCGTGTCCCT-- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592031 178 - 852752 TGCCCATTGCACTGTTTTCAGTGTGTCATGATTTTTCCTTATTTAATTTTCTTAGTAATG-ATTTCACCA---AGACAAACTGACTGACAGTTGGTGGAACACAATATCT-TGTTTTA----------------TTTATT-TCCTTTATCCGTCGACATGTGCTGGATGAGGGTCACACTGAATTTTTGCT----CGAGACCAA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=68960.000000 s hg38.chr17_JH159148v1_alt 55907 9 + 88070 -CAACAAGTT s panTro5.chr17 16366789 9 + 83181570 -GAATAAGTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16271995 9 + 83442489 -CAACAAGTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118851 9 + 4267968 -CAATAAGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108511 9 - 2193130 -GAATAAGTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168632 9 - 77216781 -GTAAAAGTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063226 9 - 80997621 -GAATAAGTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121631 9 + 10377808 -GAATATGTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011848 9 - 8458610 -GAATAAGTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951851 9 + 75148670 -GAATAAGTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217455 9 + 4244037 -GAATAAGTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216251 9 + 4569836 -GAATAAGTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6495 9 - 12755 -GAATAAGTC i calJac3.chr5_ACFV01180105_random C 0 C 0 s cebCap1.NW_016107543v1 21407 9 - 4077172 -GAATAAGTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15218 9 - 94492 -GAATAAGTC i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520459 9 + 61074082 -CAATGTGTG i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592209 10 - 852752 GGAGCAGGTC i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e saiBol1.JH378271 1867262 6421 + 3513951 I a score=1776436.000000 s hg38.chr17_JH159148v1_alt 55916 227 + 88070 TCTTCAGATGAGACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCTTTTTTTGATGTAGATGAATTGAATGAGTGGCTGGTCAGAGGCTGAGACA---AAAAGAGAT-CCCTGCATTCAGGGCAGCCATTAAATGCAGTCCCTGCTGCCATATCACGCAGCTGTTTCTCACTGAGGTGTGGGAAA-----TTGGGAA---TT----TTT-----TGT-----A----AACAAAAACGTTATCTGCAAATATAAGA s panTro5.chr17 16366798 221 + 83181570 TCTTCAGATGAGGCTCCGTCTCCTGAGTCCACAATACATTCTCAAGCATTTTTTGATGCATATGAATGGAATGAATGGCTGGTCAGAGGCTCAGACA---AAA--AGAT-CTCTGCATTCAGGGCAGCCGTTAAA-------------GGCATATCATTCAGCCTTTGCTCACTGAGGTGTGGGGAAC-TACTTCGGGA---TT----TTTTTGTGTGT-----G----AACAAAAGTGTTATCTGCAAATATGTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272004 227 + 83442489 TCTTCAGATGATACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCTTTTTTTGATGCAGATGAATTGAATGAGTGGCTGGTCAGAGGCTGAGACA---AAAAGAGAT-CCCTGCATTCAGGGCAGCCATTAAATGCAGTCCCTGCTGCCATATCATGCAGCTGTTTCTCACTGAGGTGTGGGAAA-----TTGGGAA---TT----TTT-----TGT-----A----AACAAAAACGTTATCTGCAAATATAAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4118860 227 + 4267968 TCTTCAGATGAGACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCTTTTTTTGATGCAGATGAATTGAATGAGTGGCTGGTCAGAGGCTGAGACA---AAAAGAGAT-CCCTGCATTCAGGGCAGCCATTAAATGCAGTCCCTGCTGCCATATCATGCAGCTGTTGCTCACTGAGGTGTGGGAAA-----TTGGGAA---TT----TTT-----TGT-----A----AACAAAAACGTTATCTGTAAATATAAGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108520 233 - 2193130 TCTTCAGATGGGACTC--TCTCATGAGTCCACAATGAATTCTCAAGCATTTTTTGATGCAGATGAATTGAATGAATGGCTGGTCAGAGGATGAGACA---AAAAGAGAT-CCCTGCTTTCAGGGCAGCCATTAAATGCAGTCCCTGCTGCCATATCATGCAGCTGTTGCTCACTGAGGTGTGGGAAACTTATTTGGGAAAACTT----TTT-----TGT-----G----AACAAGAATGTTATCTGCAAATGTAAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168641 235 - 77216781 TCTTCAGAT-AGACTCCCTCTCATGAGTCCACAATACATTCTCAAGCATTTTTTGTTGCAGTAAAAGTGAATGAATGGCTGGTTGGAGACTGAGAAA---ACA--CAGT-CCCTGCACTCAGGGCAGCCATTAAATGCAGTTCCTGCTGCCATATCATGCACCTGTTCCTCATTCAGGTGTGGGAAATTATGCTGGTAA---TT--TTTTT-----TGT-----GTGTTAACAAAAACGTTATCTGCAAATATGAGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063235 218 - 80997621 TCTTCAGATGAGACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCA-TTTTTTATGCAGATGCATAGAATGAATGGCTGGTCAGAGGCTGAGACA---AAA--AGAT-CCCTGCATTCAGG-------------GCAGTCCCTGCTGCCACATCGTGCAGCTGTTGCTCGCCGAGGTGTGGGAAACTAATTAGGGAA---TT--TTTTT-----TAT-----C----AACAAAAATGTTAGCTGCAAACATGAGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121640 234 + 10377808 TCTTCAGATGAGACTCCCTCTCATGAGTCCACAATGAATTCTCCAGCAGTTTTTGATGCAGGTGAATGGAATCAATGGCTGATCAGAGGCTGAGATG---AAA--AGAT-CTCTGCATTCAGGGCAGCCATTAAATGCAGTCCCTGCTGCCATATCATGCAACTCTTGCTCACTGAGGTGCAGGAAACTAAGTTGGAAA---TTAAGTTTA-----TGT-----G----AACAAAAATGTTATCTGCCAATATAAGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2011857 218 - 8458610 TCTTCAGATGAGACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCA-TTTTTTATGCAGATGCATAGAATGAATGGCTGCTCAGAGGCTGAGACA---AAA--AGAT-CCCTGCATTCAGG-------------GCAGTCCCTGCTGCCACATCATGCAGCTGTTGCTCACTGAGGTGTGGGAAACTAATTAGGGAA---TT--TTTTT-----TGT-----A----AACAAAAATGTTAGCTGCAAACATGAGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64951860 219 + 75148670 TCTTCAGATGAGACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCA-TTTTTTATGCAGATGCATAGAATGAATGGCTGGTCAGAGGCTGAGACA---AAA--AGAT-CCCTGCATTCAGG-------------GCAGTCCCTGCTGCCATATCATGCAGCTGTTGCTTACTGAGGTGTGGGAAACTAATTAGGGAA---TT-TTTTTT-----TGT-----A----AACAAAAATGTTAGCTGCAAACGTGAGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217464 234 + 4244037 CCTTCAGATGAGACTCCCTCTCATGAGTCCACAATGAATTCTCAAGCAGTTTTTGATGCAGGTGAATGGAATCAATGGCTGATCAGAGGCTGAGATG---AAA--AGAT-CTCTGCATTCAGGGCAGCCATTAAATGCAGTCCCTGCTGCCATATCATGCAACTGTTGCTCACTGAGGTGCAGGAAACTAAGTTGGAAA---TTAAGTTTA-----TGT-----G----AACAAAAATGTTATCTGCAAATATAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216260 230 + 4569836 TCTTCAGATGAGACTCTCTCTCATGAGTCCACAATAAATTCCCAAGCA-TTTTTTATGCAGATGCATAGAATGAATGGCTGGTCAGAGGCTGAGAC----AAA--AGAT-CCCTGCATTCAGGGCAGTCATTAAATGCAGTCCCTGCTGCCATATCATGCAACTGTTGCTCACTGAGGTGTGGGAAACTAATTAGGGAT---TT--TTTTT-----TGT-----T----AACAAAAATGTTAGCTGCAAACAGGAGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6504 232 - 12755 CCTTCAATTGAGACTCTCTCTCATGAGGACACAATCAATTCTCAAGCATTTTTTGATGCAGATGAATTGAATGAATGGCTCGTCAGAGGCTGAGATA---AAAAGAGAT-CC-TGCATTCAGGGCAGCTATTAAATGCAGTCCCCGCTGCCATATCATGCAGCAGTTGCTCACTGAAGTGTGGGAAATGAATTTGGGAA---TA---TTTT-----TGT-----G----AACAAAAATGTTATCTGCAAATATGAAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1873683 234 + 3513951 TTCTCAGATCAGACTCTCTTTCTTG-GGACAGAATGCATTCTCACAAA-TGTTTGATGCAGATTAATTGAATAAGTAGCTGGTCAGAGGCAGAGTGG---AAAAGAGAG-CC--ACATTCAGGGGAGCTATTAAATGCAGTCCCTGTTTTCATACCATGTAGCTATTGCTCACTGAGGTGTGGAAAACTAATTTGGGAA---GA---CCTT-----TTTGAACAG----AACAGAAATGTTATCTGCAAATATGAGA i saiBol1.JH378271 I 6421 C 0 s cebCap1.NW_016107543v1 21416 233 - 4077172 CCTTCAGATAAGACTCTCTCTCATGAGGACACAATGAATTCTCAAGCATTTTTTGATGTAGATGAATTGAATGAATGGCTCATCAGAGGCTGAGACA---AAAAGAGGT-CCCCAGATTCAGGGCAGCTATTAAATGCAGTCCCTGCTGCCATATCATGTAGCAGTTGCTCACTGGAGAGTGGGAAATGAATTTGGGAA---TA---CTTT-----TGT-----G----AACAAAAATGTTATCTGCAAATATGAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15227 232 - 94492 CCTTCAGATGAGAGTCTCTCTCATGCGGACACAATGAATTCTCAAGCA-TTTTTGATGCAGATGAATTGAATGAATGGCTCGTCAGAGGCTGAAACA---AAAAGAGAT-CCCTGCATTCAGGGCAGCTATTAAATGCAGTCCCTGCTGCCATATCATGCAGTGGTTGCTCACTGAAGTGTGGGAAATGAATTTGGGAA---TA---TTTT-----TGT-----G----AACAAAAATGTTATCTGCAAATATGAAG i aotNan1.NW_018505111v1 C 0 C 0 s canFam3.chr9 21520468 222 + 61074082 TGTTCATCTGCAGCCCTCAGTCATGAGGACACCGTAGGCTCAC---CTATCTTTGATGCGGAGGGGT-GCATGAGGGACTGGATGGGGCCCAAGGCAACCAAA--GGGC-TCCTGTGCACAGG--AACTCTACAAGGAAGGGCCCACTGCCCTCACACAGGGATTCTGGTCACTGAGGTGTAGGACACAATGTCTACAA---CT----TTG-----TCC-----C---------AGATGTTCCCCACATATGTAGGG i canFam3.chr9 C 0 I 2 s dasNov3.JH570468 592219 228 - 852752 CCTTTAGATGAGCATCCCTAACTTCA-CATAAAGTGGAGTCTCAAAA--TATGTGATGCCGGTGAATGGCATCCCTGAGTGGAAAGAGCCTGAGGCA---AACAACGTCACCCTGTGTTAAGGG-ATCTCTTATACATAGCCATTGATACC-TTTCACATCATTGTTGCTCACTGAGGTGTTGAAAACTGATTTGGAAA---GA---GCTT-----TGT-----A----CATGGAAACATTAACTG-ATATTCAACA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=1141759.000000 s hg38.chr17_JH159148v1_alt 56143 127 + 88070 --GATTATTTGTCCTATTGTT-AAAA-AAACTCAAGTATATGACTTGCTAATAC-TTACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAATGTAAGTGTCCTTGGGCAGAAAGAGAGgacct-cagcttg s panTro5.chr17 16367019 127 + 83181570 --GATTATTCCTCTCATTGTT-AAAT-AAACTCAAGTACATGTCTTGCTAGTGC-TGACT-TCCAGTGTCATTTCTA-C-TATATTG-GGAGTTAAATGTAAGTGTCCTTAGGCAGAAAGAgaggacct-caccttt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272231 128 + 83442489 --GATTATTTGACCTATTGTTAAAAA-AAACTCAAGTATATGACTTGCTAATAC-TTACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAATGTAAGTGTCCTTGGGCAGAAAGAGAGgacct-cagcttg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119087 127 + 4267968 --GATTATTTGTCCTATTGTT-AAAA-AAACTCAAGTATATGACTTGCTAATAC-TTACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAATGTAAGTGTCCTTGGGTAGAAAGAGAGgacct-cagcttg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108753 126 - 2193130 --GATCATTCCTCTCATTGTT-AAAT-AAAATCAAGTGCATGTCTTGCTAGTGC-TGTCT-TCCAATGTCATCTC-A-C-TGTATTG-AGAGTTAAACGTAAGTGTCCTTGGGCAGAATGAGAGGACCC-CAGCTTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30168876 127 - 77216781 --GATTATTCCTCTCACTGTT-AAAT-AAACTCAAGTGCAAGTCTTGCTAATGC-TGACT-TCCAATGTCATTTC-A-C-TATATTG-AGAGTTAAATGTAAGTGCTCTCGGCCAGAAAGAGAGAACTTCCACCTTG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063453 127 - 80997621 --GATTATTTATCTCATTGTT-CAAT-AAACTCAAGTGCATGTCTTGCTAGTGC-TGACT-TCCAATGTCTTTTCTA-C-TATATTG-AGAGTTAACCATAAATGTCCTTGGGCAGAAAGAGAGGACCT-CAGCTTG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2121874 127 + 10377808 --GATTAATCCTCTCGTTGTT-AAAG-AAACTCAAGTGCATGTCTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAATGTAAGTGTCCTTGGATAGAAAGAGAGGACCT-CAGCTTG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012075 127 - 8458610 --GATTATTTATCTCATTGTT-AAAT-AAACTCAAGTGCATGTCTTGGTAATGC-TAACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAACATAAATGTCCTTGGGCAGAAAGAGAGGACCT-CAGCTTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952079 127 + 75148670 --GATTATTTATCTCATTGTT-AAAT-AAACTCAAGTGCATGTCTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAACATGAATGTCCTTGGGCAGAAAGAGAGGACCT-CAGCTTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217698 127 + 4244037 --GATTAATCCTCTCATTGTT-AAAG-AAACTCAAGTGCATGTCTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATATTG-AGAGTTAAATGTAAGTGCCCTTGGGTAGAAAGAGAGGACCT-CAGTTCG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216490 127 + 4569836 --GATTATTTATCTCATTGTT-AAAT-AAACTCAAGTGCATGTCTTGGTAATGC-TAACT-TCCAATGTCATTTGTA-C-TATATTG-AGAGTTAAATGTAAATGTCCTTGGGCAGAAAGAGAGGACCT-CAGCTTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6736 127 - 12755 --GATTATTCCTCTTATTGTT-AAAC-AAACTCAAGCGCATGTCTTGCTAGTGC-TGACT-TTCAAGGTCATTTCTA-C-CTTATTG-AGAGTTAAATGTAATTGTCCTTGGGCAGAAGGAAAGGACCT-CATTTTG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1873917 125 + 3513951 --GATTATACCGCCCA-TGTT-CAAT-AAACTC-AGTGCTTGTCTTTTTCTTAC-TGAAT-CCCAATATCATTTCTA-C-TTTACTG-AGAATTAAATCGGAGTGTTGTTGGGCAGAAAGAGAGGATCT-CACCTTG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21649 127 - 4077172 --GATTATTCCTCTTACTGTT-AAGC-AAACTCCAGTGCATGTCTTGCTAGTGC-TGACT-TTCAAGGTCATTTCTA-C-CTTATTG-AGAGTTAAATGTAATTGTCCTTGGACAGAAGGAGAGGACCT-CATCTTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15459 127 - 94492 --GATTATTCCTCTTATCGTT-AAAC-AAACTCAAGTGCATGTCTTGCTAGTGC-TGACT-TTCAAAGTCATTTCTA-C-CTTATTG-AGAGTTAAATGTAATTGTCCTTGGGCAGAAGGAGAGGACCT-CATCTTG i aotNan1.NW_018505111v1 C 0 I 334 s otoGar3.GL873537 22867388 123 + 28711273 --gatttttgttgttgttgTT--------GCTCAAGTGCACAGCTCACCAGTTC-TCATTCTCCAGTAGCAGTTCTAGT-TGCTTTG-AGATGGACATGCAGGTGCCCTTGAGCAGACACCGCAGACCC-AGTCCTG i otoGar3.GL873537 I 5356 C 0 s canFam3.chr9 21520692 128 + 61074082 --GACCAGTTCCATGGTCAAT-GAAG-ACACTCAACTGAATAGCTTGCTGGAGC-TCAGG-GCCAGGGTGTTTCCTAAC-TGGTCTGCAGATGGGAATGTGAGCGCCCTTCAGCCAGGGCAGGAGATA--CAGCCTG i canFam3.chr9 I 2 C 0 s dasNov3.JH570468 592447 128 - 852752 GTTATTATTTCT----TTGCC-AAATGGAATTCAAAAATCCATCTTGCTAACACTTGATC-TGCAGCACCATTTCTC-CTTACCTTG-AGAGGCAAGTCTAAGAGACCTCCACCAGAGCCAGAAGACCC-AGTTCTC i dasNov3.JH570468 C 0 C 0 a score=21913.000000 s hg38.chr17_JH159148v1_alt 56270 2 + 88070 ga s panTro5.chr17 16367146 2 + 83181570 ga i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272359 2 + 83442489 ga i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119214 2 + 4267968 ga i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108879 2 - 2193130 GA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169003 2 - 77216781 GA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063580 2 - 80997621 GA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122001 2 + 10377808 GA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012202 2 - 8458610 GA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952206 2 + 75148670 GA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217825 2 + 4244037 GA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216617 2 + 4569836 GA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6863 2 - 12755 GA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874042 2 + 3513951 GA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21776 2 - 4077172 GA i cebCap1.NW_016107543v1 C 0 I 337 s otoGar3.GL873537 22867511 2 + 28711273 GA i otoGar3.GL873537 C 0 I 2 s canFam3.chr9 21520820 2 + 61074082 GC i canFam3.chr9 C 0 I 2 s dasNov3.JH570468 592575 2 - 852752 CA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15586 334 - 94492 I a score=-29430.000000 s hg38.chr17_JH159148v1_alt 56272 3 + 88070 -ca---a s panTro5.chr17 16367148 3 + 83181570 -cc---a i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272361 3 + 83442489 -ca---a i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119216 3 + 4267968 -ca---a i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108881 3 - 2193130 -CC---A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169005 6 - 77216781 -CCGCAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063582 3 - 80997621 -AC---A i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122003 3 + 10377808 -TC---A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012204 3 - 8458610 -AC---A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952208 3 + 75148670 -AC---A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217827 3 + 4244037 -TC---A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216619 3 + 4569836 -AC---A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 6865 3 - 12755 -TC---A i calJac3.chr5_ACFV01180105_random C 0 I 314 s saiBol1.JH378271 1874044 3 + 3513951 -CC---T i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22867515 1 + 28711273 -T----- i otoGar3.GL873537 I 2 C 0 s canFam3.chr9 21520824 2 + 61074082 -CT---- i canFam3.chr9 I 2 C 0 s dasNov3.JH570468 592577 3 - 852752 TCT---- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15586 334 - 94492 I e cebCap1.NW_016107543v1 21778 337 - 4077172 I a score=105851.000000 s hg38.chr17_JH159148v1_alt 56275 17 + 88070 gagtctgccctttacta s panTro5.chr17 16367151 17 + 83181570 gagtctgccctttacta i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272364 17 + 83442489 gagtctgccctttacta i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119219 17 + 4267968 gagtctgccctttacta i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108884 17 - 2193130 GAGTCTGTCTTTTATTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169011 16 - 77216781 AAATCTGCCT-TTAGTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063585 17 - 80997621 GAGTCTGCCCTTTACTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122006 16 + 10377808 GAATCTGTCC-TTATTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012207 17 - 8458610 GAGTCTTCCCTTTACTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952211 17 + 75148670 GAGTCTGCCCTTTAGTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217830 16 + 4244037 GAATCTGTCC-TTATTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216622 17 + 4569836 GAGTCTGCCCTTTACTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7182 16 - 12755 GAGTCTGTCCATTATT- i calJac3.chr5_ACFV01180105_random I 314 C 0 s saiBol1.JH378271 1874047 17 + 3513951 GAGTCTGTCCTTTATTA i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22867516 17 + 28711273 CAGTGTGACTATTATTC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21520826 16 + 61074082 GATTCTGCCC-CTGTCA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592580 17 - 852752 GAGTTTGGGCATTTCTA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15586 334 - 94492 I e cebCap1.NW_016107543v1 21778 337 - 4077172 I a score=16757.000000 s hg38.chr17_JH159148v1_alt 56292 2 + 88070 gc- s panTro5.chr17 16367168 2 + 83181570 gc- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272381 2 + 83442489 gc- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119236 2 + 4267968 gc- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108901 2 - 2193130 GC- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169027 2 - 77216781 GT- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063602 2 - 80997621 GC- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122022 2 + 10377808 GC- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012224 2 - 8458610 GC- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952228 2 + 75148670 GC- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217846 2 + 4244037 GC- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216639 2 + 4569836 GC- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7198 2 - 12755 GC- i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874064 2 + 3513951 GC- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22115 2 - 4077172 GC- i cebCap1.NW_016107543v1 I 337 C 0 s otoGar3.GL873537 22867533 2 + 28711273 AC- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21520842 2 + 61074082 GC- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592597 2 - 852752 -CA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15586 334 - 94492 I a score=249912.000000 s hg38.chr17_JH159148v1_alt 56294 27 + 88070 tacataaca-tcaca-c-attaaattgttc s panTro5.chr17 16367170 27 + 83181570 tacataaca-tcaca-c-attaaatttttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272383 27 + 83442489 tacataaca-tcaca-c-attaaattgttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119238 27 + 4267968 tacataaca-tcaca-c-attaaattgttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108903 27 - 2193130 TACATAACA-TCACA-C-ATTAAATTGTAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169029 29 - 77216781 TACATAACATTCACA-CAATTAAATTGTTC i rheMac8.chr16 C 0 I 38 s macFas5.chr16 28063604 27 - 80997621 TACATAACA-TCACA-C-ATTAAATTGTAC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122024 27 + 10377808 TACATATCA-TCACA-C-ATTAAATTGTTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012226 27 - 8458610 TACATAACA-TCACA-C-ATTAAATTGTAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952230 27 + 75148670 TACATAACA-TCACA-C-ATTAAATTGTAc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217848 27 + 4244037 TACATATCA-TCACA-C-ATTAAATTGTTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216641 27 + 4569836 TACATAACA-TCACA-T-AGTAAATTGTAC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7200 27 - 12755 CACATAACA-TCACA-C-ATTAAATTGttc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874066 27 + 3513951 TACATCAGA-GCACA-C-AATAAATTGTTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22117 27 - 4077172 TACATAATA-TCACA-T-ATTAAATTGttc i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15920 27 - 94492 TACATAACA-TCACA-C-ATTAAATTGttc i aotNan1.NW_018505111v1 I 334 C 0 s otoGar3.GL873537 22867535 27 + 28711273 TACAAGACA-TTATG-C-TATGAAGTTTTC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21520844 27 + 61074082 TCTGTGACA-TGATGTC-ATGGGATTTTA- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592599 27 - 852752 CACATGACT-TTACA-CAAGTCAATTTTC- i dasNov3.JH570468 C 0 C 0 a score=280627.000000 s hg38.chr17_JH159148v1_alt 56321 38 + 88070 tcagctgaaa-aaatggaggtaataacacacgaccatct s panTro5.chr17 16367197 38 + 83181570 tcagctgaaa-aaatggagttaataatacacgatcatct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272410 38 + 83442489 tcagctgaaa-aaatggaggtaataacacacgaccatct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119265 38 + 4267968 tcagctgaaa-aaatggaggtaataacacacgaccatct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108930 38 - 2193130 TCAGCTAAAA-AAATGAAGGTAATAATACATGACTATCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28063631 38 - 80997621 TCAACTGAAA-GAATGGAGGTAATAATACGTGATCATAT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122051 38 + 10377808 TCAGCCAAAA-AAATGAAGGTAACAATACATGACCATCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012253 38 - 8458610 TCAACTGAAA-GAATGGAGGTAATAATACATGATCATAT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952257 38 + 75148670 tcaactgaaa-gaatggaggtaataatacatgatcatat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217875 38 + 4244037 TCAGCTGAAA-AAATGAAGGTAACAATACATGACCGTCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216668 38 + 4569836 TCAACTGAAA-GAATGGAGGTAATAATACATGATCATAT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7227 37 - 12755 tcagctgaaa--aatgaaggtaataatccatgaccatct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874093 37 + 3513951 TCGGCTGAAT--AATTGAGGCAATAACACATGAGCATCT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22144 37 - 4077172 tcagctgaaa--aatgaaggtaataatccatgaccatct i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15947 37 - 94492 tcagctgaaa--aatgaaggtaataatccatgaccatct i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867562 39 + 28711273 TCATCTGAAAAAAATGATATTAACAATACAAGGGTAACT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21520871 36 + 61074082 TCATCTCCAA---GTGGAGATACAAATTTGTGGGGGATT i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592626 36 - 852752 AAGTCTGAAG-GGA--GAGGCAATATTTACTGGGAGGTT i dasNov3.JH570468 C 0 C 0 e rheMac8.chr16 30169058 38 - 77216781 I a score=499564.000000 s hg38.chr17_JH159148v1_alt 56359 51 + 88070 gt-tttgag--aatcaaattgg-ataatacctat-GGTATGTGATATGTGTGTAAA s panTro5.chr17 16367235 51 + 83181570 gt-tttgag--aatcaaattgg-ataatacctat-ggtatgtgaTATGTGTGTATA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272448 51 + 83442489 gt-tttgag--aatcaaattgg-ataatacctat-GGTATGTGATATGTGTGTAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119303 51 + 4267968 gt-tttgag--aatcaaattgg-ataatacctat-GGTATGTGATATGTGTGTAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108968 51 - 2193130 GT-TTTGAG--AATCAAATTGG-ATAATACCTAT-GGTATGTGATATGTGTGTAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169096 52 - 77216781 GT-TTTGAG--AATCAAATTGGAATAATACCTAT-CGTATGTGATATATGTGTAAA i rheMac8.chr16 I 38 C 0 s macFas5.chr16 28063669 51 - 80997621 GT-TTTGAG--AGTCAAGTTGG-ATAATACCTAT-GATATGTGATATGTATATAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122089 51 + 10377808 GT-TTTGGG--AATCAAGCTGG-ATAATACCTAT-GGTATATGATATGTGTGTAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012291 51 - 8458610 GT-TTTGGG--AATAAAATTGG-ATAATACCTAT-GGTATGTGATATGTATGTAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952295 51 + 75148670 gt-tttgag--aatcaaattgg-ataatgcctat-GGTATGTGATATGTATGTAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217913 51 + 4244037 GT-TTTGGG--AATCAAGCGGG-ATAATACCTAT-GGTATATGATATGTGTGTAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216706 52 + 4569836 GTATTTGAG--AATCAAATTGG-ATAATACCTAT-GCTATGTGATATGTATGTAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7264 51 - 12755 gt-tctgag--gatcaaattaa-ataatacatat-gGTATGTTATATGTGTGTAAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874130 51 + 3513951 GT-TTTCAG--AATCAAGTTGC-ATATTACATAT-AGGATGCAATATGTGTGTAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22181 51 - 4077172 gt-tctgag--gatcaaattaa-ataatacatat-gGTATGTTATATGTGTGTAAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15984 51 - 94492 gt-tctgca--gatcaaattaa-ataatacatat-gGTATGTGACATGTGTGTAAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867601 51 + 28711273 GT-ATTGAA--AAGAAAAATGG-ATAATATATAT-GGCATGCCATACGTATACAAG i otoGar3.GL873537 C 0 I 46640 s canFam3.chr9 21520907 50 + 61074082 --ATAGGAG--GCTCTAAATGG-ATAATGCACGT-GGTATGGAACTTGTGTATACA i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 592662 50 - 852752 TT-TATGAGGCAGTAAAAC----CTCatatttataaatatataa-atgtttataaa i dasNov3.JH570468 C 0 C 0 a score=2012522.000000 s hg38.chr17_JH159148v1_alt 56410 219 + 88070 -TCTCATATCAGG-AATGCTTTC-ATATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGATGGTTCAGAG-TTTATTCAGAAACATATAGCTAAGAATCTCTG---CTGGTAGCAGAAACATAACCC---AAAGTTA---TG-AAAAGAAGAAAGAAGGATACAAGAACCATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC s panTro5.chr17 16367286 219 + 83181570 -TCCCATATCAGG-AATGCTTTC-AAATAAAACA-AAA--CACTATATGAGAT--G-A-----------AGATGGTTCAGAG-TTTATTCAGAAACATATAGGTAAGAATCTCTG---C---TACCAGGGACATAACCC---AAAGTTATCGTG-AAAAGAAGAAAGAAGGATACAAAAACCATGAGAAGGATATTGAAAATGAAAATATGATTGCAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272499 222 + 83442489 -TCTCATATCAGG-AATGCTTTC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGATGGTTCAGAG-TTTATTCAGAAACATATAGCTAAGAATCTCTG---CTGGTAGCAGAGACATAACCC---AAAGTTATCATG-AAAAGAAGAAAGAAGGATACAAGAACCATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119354 222 + 4267968 -TCCCATATCAGG-AATGCTTTC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGATGGTTCAGAG-TTTATTCAGAAACACATAGCTAAGAATCTCTG---CTGGCAGCAGAGACATAACCC---AAAGTTATCATG-AAAAGAAGAAAGAAGGATACAAGAACGATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109019 218 - 2193130 -TCCCATATCAGG-AATGCTTTC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGATGATTCAGAG-TTTATTCAGAAATATATAGGTAAGAATCTCTG---C---TACCAAGGACATAA-CC---AAAGTTATCATG-AAAAGAAGAAAGAAGGATACAAGAACCATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAA-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTATATTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169148 229 - 77216781 -TCCCATATCAGGAAATATTTTT-AAATAAAACA-AAAACCAGCATATGAGATTGA-G-----------GGATGGTTCAGAACTTTACTCAGAAA-ACATAGCAAAGAATTTCCTTGCC---TACCAGGGACATAACTC---AAAGTTATCATGAAAAAAAAGAAAAAAGGATAGCAAGAACATGAGGACGATATTGAAAACAAAAATATAATTGCAAAGTTTTATCGATCAG---TTCAGAA---------------------A------------------------------ACCTAAATTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063720 219 - 80997621 -TCCCATATCAGG-AGTGATTCC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------AGTTGGTTCCAAG-TTTATTCAGAAACATATAGCTAAGAATCTCTG---T---TACCAGGGACATAACCC---AAAGTTATCATG-AAAAGAAGAAAGAAGGATACAAGAAACATGAGGAGGATATTGAAAACAAAAATATGATTGTAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122140 219 + 10377808 -TCCCATATCAGA-AATGCTTTC-AAATAAAACA-AAA--CACCTTATGAGAT--G-A-----------GGATAGTTCAGAG-TTTATTCAGAATCATATAGCTAAGAACTTCTG---C---TACCAGGGACATAACCC---AAAGTTATCATG-AACACAAGAAAGAAGGATACAAGAAACATAAGGAGGATATTGAAAACAAAAATACGATTGCAAAG-ATTATTGATCAA---TTGCAGA---------------------A------------------------------ACCTAAATTG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012342 219 - 8458610 -TCCCATATCAGG-AATGATTCC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGTTGGTTCCAAG-TTTATTCAGAAACAAATAGCTAAGAATCTCTG---T---TACCAGAGACATAACCC---AAAGTTATCATG-AAAAGAAGAAAGAAGGATACAAGAAACATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952346 219 + 75148670 -TCCCATATCAGG-AATGATTCC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGTTGGTTCCAAG-TTTATTCAGAAACATATAGCTAAGAATCTCTG---T---TACCAGAGACATAACCC---AAAGTTATCATG-AAAAGAAAAAAGAAAGATACAAGAAACATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAG-ATTATTGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2217964 218 + 4244037 -TGCCATATCAGA-AATTCTTTC-AAATAAAACC-AAA--CACCTTATGAGAT--G-A-----------GGATACTTCAGAG-TTTATTCAGAATCATATAGCTAAGAACTTCTG---C---TACCAGGGACATAACCC---AAAGTTATCATG-AACACAAGAAAGAAGGATACAAGAAACATAAGGAGGATATTGAAAACAAAAA-AAGATTGCAAAG-ATTATTGATCAA---TTGCAGA---------------------A------------------------------ACCTAAATTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216758 219 + 4569836 -TCCCATATTAGG-AGTGATTCC-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------AGTTGGTTCAGAG-TTTATTCAGAAACATATAGCTAAGAATCTCTG---T---TACCAGGGACATAACCC---AAAGTTATCATG-AAAAGAAGAAAGAAGGATACAAGAAACATGAGGAGGATATTGAAAACAAAAATATGATTGCAAAG-ATTATTGATCAG---TTGTAGA---------------------A------------------------------ACCTAAATTC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7315 215 - 12755 -TCCCATATCAAG-AATGCTTTA-AAATAAAACA-AAA--CACCATGTGAGAT--G-A-----------GGATGGTTCAGAG-TTTATTCAGAAACATGTAGGCAAGAATGTCTG---C---TACCAGGAACATGACCC---AAAGTCATCATG-AAAAGAAGAAAGACA----CAAGAACAATGAGGAGGATATTGAAGACAAAATTATGACTACAAAG-ATTATGGATTAG---TTGCAGA---------------------A------------------------------ACCTAAATTT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874181 216 + 3513951 -TCCCTTAGC----AATTCTGTA-GAATAAAACA-AAA--CACCATATGAGAT-GG-A-----------GGATGGTTCAGAA-TTTATTGAGAAACATATTGGTAAGAATCTGTG---C---TATAAGGGACTTAGCCC---AGAGTTATTGTA-AAAAGTAGAAAGGAGGGT-AAAAAACCATGAGGAGGAAATTGAAAATGAAAATATGATTGCAAAG-ATTATGGATACG---TTGCAGA---------------------A------------------------------ATCTAAATTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22232 219 - 4077172 -TCCCATATCAGG-AATGCTTTA-AAATAAAACA-AAA--CACCATATGAGAT--G-A-----------GGATGGTTCAGAG-TTTATTCAGAAACATGTAGGCAAGAATCTCTG---C---TACCAGGAACATGACCC---AAAGTTATCATG-AAAAGAAGAAAGAAAGATACAAGAACAATGAGGAGGATATTGAAGACAAAATTATAACTGCAAAG-ATTATGGATCAG---TTGCAGA---------------------A------------------------------ACCTAAATTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16035 219 - 94492 -TCCCATATCAGG-AATGCTTTA-AAATAAAATA-AAA--CACCATATGAGAT--G-A-----------GGATGGTTCAGAG-TTTATTCAGAAACATGTAGGTAAGAGTCTCTG---C---TACCAGGAACATAGTCC---AAAGTTATCATG-AAAAGAAGAAAGAAAGATACAAGAACAATGAGGAGGATATTGAAAACAAAATTATGATCGCAAAG-ATTATGGATTAT---TTGCAGA---------------------A------------------------------ACCTAAATTT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22914292 213 + 28711273 -TCTTATGAAGGA-AATGCTCTAGAAATAAATAC-AAA--TGCAAGAGAAGAT--G-T-----------GAGGCAATACAGG-TTTATTAGGAAATAAGCAGGGGAGACTCCCCT---C---AACTAGGAAAACAATGT---AAAGTGGCCATA-AAAGGGGAAAAGAAGAGGGC-ACAATAATAAGGAATACATTGA----GAAAATATCACTT------ATCATTGAGAAGAGTTAGGAAA---------------------A------------------------------AAGTAGGTTT i otoGar3.GL873537 I 46640 T 19683 s canFam3.chr9 21520958 235 + 61074082 -CGTGATGTTGTG-AGCACT----GAAGAAGACATGGA--CACCATATGGGAT--GCA-----------GAATGATACACGG-TTTATT--AAAAGGTATAGGTGAGACCTCCCC---C---CTGCATGGAGGGAGCCCTTTGATGTGTTCATG-CAAGGATGAGAAAAGGATACAAGGACTGTGAGG---ACACGGAAAGAGAAAACATGA-TGCCAAG-ACT-TTCATTAG---TGGCAGACCTCTGTACAATAGGCATAAGG------------------------------ACTTGTGTCT i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 592712 253 - 852752 tCTCTGTATCAGA-AAGGCTATA-GAACAAAAGGGAAA--CATGATGTG-GAT--G-ACTGATTTGGATGAATGGTAGAGAA-TTTATTTAGAAACGTATACATAAGACTCCTTG---C---ATCAAGGGAGGCAAGTC---AAAG-GATCATA-AAAAGAAGATAGCATGACACAAGAATCAT---GGCTATATTAAAAGCAAA---GTGATTATGAAG-ATTATGGATCAA---TTAGAGA---------------------AGTCTATGGAAAGAGCTATGAACACTTGTTTGCTTAAGTT- i dasNov3.JH570468 C 0 C 0 a score=1926520.000000 s hg38.chr17_JH159148v1_alt 56629 235 + 88070 C---------TTAGAAGCAGAGAATGAAG----CTC--TTGACTTT---TGAGTCAAAGCTGAGACCATGAC-TCAAAATTGA-GAACACACGAA-GCTGGCACA---------TGATCCACAAAG-TGTAAGGAAAAAGAG-AAT----------------CAGGATGAAG-------TATT-CTGCCCTCCCT-CAAGCAGATTCCCAAGATTTTAAACAGGTAGAGAATT--CATAAAA-----------ATTT-GGGTGAGAG-CATGG--T-GGCTGTCAGCAGC-----AAATT----AAATTAGTCCCCC---AA-- s panTro5.chr17 16367505 235 + 83181570 C---------TTAGAAGCAAAGAATGAAG----CTC--TTGATTTT---TGAGTCAAAGCTGAGATCATGAC-TCCAAATTGA-GAACAGACGAA-GCTGGCACA---------TGATCCACAAGG-TGTAAGGAAAAAGGG-AAT----------------GAGGATGAAG-------TATT-CTGCCATCCCT-CAAGCAGATTCCCAAGATTTTAAACATGTAGAGAATT--CATAAAA-----------ATTT-GGGTGAAAG-CATGG--T-GGCTGTCAGCAGC-----AAAAT----AAATTAGTCCCTC---AA-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272721 235 + 83442489 C---------TTAGAAGCAGAGAATGAAG----CTC--TTGACTTT---TGAGTCAAAGCTGAGACCATGAC-TCAAAATTGA-GAACACACGAA-GCTGGCACA---------TGATCCACAAAG-TGTAAGGAAAAAGAG-AAT----------------CAGGATGAAG-------TATT-CTGCCATCCCT-CAAGCAGATTCCCAAGATTTTAAACATGTAGAGAATT--CATAAAA-----------ATTT-GGGTGAGAG-CATGG--T-GGCTGTCAGCAGC-----AAATT----AAATTAGTCCCCC---AA-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119576 234 + 4267968 C---------TTAGAAGCAGAGAATGAAG----CTC--TTGACTTT---TGAGTCAAAGCTGAGACCATGAC-TCAAAATTGA-GAACACACGAA-GCTGGCACG---------TGATCCACAAGG-TGTAAGGAAAAA-AG-AAT----------------CAGGATGAAG-------TATT-CTGCCCTCCCT-CAAGCAGATTTCCAAGATTTTAAACATGCAGAGAATT--CATAAAA-----------ATTT-GGGTGAGAG-CATGG--T-GGCTGTCAGCAGC-----AAATT----AAATTAGTCCCCC---AA-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109237 235 - 2193130 C---------TTAGAAGCAGAGAATGAAT----CTC--TTGACTTT---TGAGTCAAAGCTAAGATCATGAT-TCCAAATTGA-GAACAGACGAA-GCTGGCACA---------TGATCCACAAGG-TGTAAGGAAAAAGAG-AAT----------------CCTGATGAAG-------TATT-CTGCCCTCTCT-CAAGCAGATTCCCAAGATTTTAAACATACAGAGAATT--CATAAAC-----------ATTT-AGGTGACAG-CATGG--T-GGCTGTCAGCAGC-----AAAGT----AAATTAGTCCCTC---AA-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169377 254 - 77216781 CCT-------TCAGAAGCAGAGAATGAAA----CTCTTTTGACTTT---CAAGTGAAAGCTGAAACCATGACTTCCAAATTGAGGAACACACGAAGGCTGGCACA---------TGATCCACAAGGTTGGAAGGTAAAAGAGAAAT----------------CAGGAGAAGG-------TATTCCTGCCCTCCCTCAAAACAGATTCCAAGAT-TTTAAACATGCAGATAATTCCCATAAAA-----------ATTTGGGGTGAGAGCCACAG--TGGGCTGTCAGCAGC-----AAAGT---AAAATTAGTCCCCCCCAAA-- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28063939 234 - 80997621 C---------TTAGAAGCAGAGAATGAAG----ATC--TTGAGTTT---TGAGTCAAAGCTGAGACCATGAC-CCCGAATTGA-GAACACACGAA-GCTGGCACA---------TGATCCACAAGG-TGGAAGGAAAAGGAG-AAT----------------CAGGATGAAG-------TATT-TTGCTGTCCCT-GAAGCAGATTCCCAAGA-TTCATAAATGCAGAGAATT--CATAAAA-----------ATTT-GGGTGAGGG-CATGG--T-GACTGTCAGCAGC-----AAACT----AAATTAGTCCCCC---AA-- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122359 233 + 10377808 C---------TTAGAAGCAGAGAAGGAAG----CAC--TTGAATAT---CGAGTC-AAGCTGGGACAATGAC-CCCAAGTTGA-GAACACACGAA-GCTGGCACA---------TGATCCACAAGG-TGGAAGGAAAAGGAG-AAT----------------CAGGATGAAG-------TATT-TTGCCATCCGT-GACACAGATTCCCAAGA-CTCATACACGCAGAGAATT--CATACAA-----------ATTT-GGGTGAGAG-CATGG--T-GGCTGTCAGCAGC-----AAAGT----AAATTAGTCCCCC---AA-- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012561 234 - 8458610 C---------TTAGAAGCAGAGAATGAAG----ATC--TTGAGTTT---TGAGTCAAAGCTGAGACCATGAC-TCCAAATTGA-GAACACACAAA-GCTGGCACA---------TGATCCACAAGG-TGGAAGGAAAAGGAG-AAT----------------CAGGATGAAG-------TATT-TTGCTGTCCCT-GAAGCAGATTCCCAAGA-TTTATACATGCAGAGAATT--CATAAAA-----------ATTT-GGGTGAGGG-CATGG--T-GACTGTTAGCAGC-----AAAGT----AAATTAGTCCCCC---AA-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952565 234 + 75148670 C---------TTAGAAGCAGAGAATGAAG----ATC--TTGAGTTT---TGAGTGAAAGCTGAGACCATGAC-TCCAAACTGA-GAACACACAAA-GCTGGCACA---------TGATCCACAAGG-TGGAAGGAAAAAGAG-AAT----------------CAGGATGAAG-------TATT-TTGCCGTCCAT-GAAGCAGATTCCCAAGA-TTTATACATGCAGATAATT--CATAAAA-----------ATTT-GGGTGAGGG-CATGG--T-GACTGTTAGCAGC-----AAAGT----AAATTAGTCCCCC---AA-- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218182 234 + 4244037 C---------TTAGAAGCAGAGAACGAAG----CTC--TTGAATAT---TGAGTCAAAGCTGAGACCATGAC-CCCGAATTGA-GAACACACGAA-GCTGGCACA---------TGATCCACAAGG-TGGAAGGAAAAAGAG-AAT----------------CAGGATGAAG-------TATT-TTGCCGTCCGT-GAAGCAGATTCCCAAGA-CTCATACACGCATAGAATT--CATAAAA-----------ATTT-GGGTGAGAG-CATGG--T-GGCTGTCAGCAGC-----AAAGT----AAATTAGTCCCCC---AA-- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2216977 234 + 4569836 C---------TTAGAAGCAGAGAATGAAG----CTC--CTGAGTTT---TGAGTCAAAGCTGAGATCATGAC-TCCAAATTGA-GAACACACAAA-GCTGGCACA---------TGATCCACAAGG-TGGAAGGAAAAAGAG-AAT----------------CAGGATGAAG-------TATT-TTGCTGTCCCT-GAAGCAGATTCCCAAGA-TTTATACATGCAGAGAATT--CATAAAA-----------ATTT-AGGTGAGGG-CATGG--T-GACTGTTAGCAGC-----AAAGT----AAGTTAGTCCTCC---AA-- i colAng1.NW_012122154v1 C 0 I 195 s calJac3.chr5_ACFV01180105_random 7530 231 - 12755 C---------TGAGAAGCAGAGAATGAAG----CTC--TTGACTTT---AGAGTCAAAGCTGAGACCATGAC-TCCAAACTGA-AGACACAGGAA-CCTGGCACA---------TGTTCCACACGG-TGTAAGG----AAAG-AAT----------------CAGGATGAAG-------TACT-CTGCCCTCCCT-CAAGCTGATTCACAAGATTTTAAACATGGAGAGAATT--CATAAAA-----------ACGT-GGGTGAGAG-TATGG--T-GGTGGTCAGCAGC-----AAAGT----AAATTACTTCCCC---AA-- i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874397 216 + 3513951 C---------TGTGAAACAGAGAATGAAG----CTC--TTGACTTT---AGAGTCAAAGCTGAGAT-------------------------GGCA-GCTGGCACA---------TAATTCCCAAAA-TGTAAGG-AGAAGAG-AAC----------------CAGGACGAAG-------TACT-CTGCCCTCCCT-CAAGCTGATTCACAAGATTTTAAACATGCAGCaaaaa--aaaaaaagaaaaaaaaagaaaT-TGGTGAGAG-CATAC--T--GTGTTTG----------AAAGC----AAATTTGTCCCCT---GA-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22451 235 - 4077172 C---------TGAGAAGCAGAGAATGAAG----CTC--TTGACTTT---AGAGTCAAAGCTGAGACCATGAC-TCCAAACTGA-AGACACAGAAA-CCTGGCACA---------TGATCCACAAGG-TGTAAGGAAAAACAG-AAT----------------CAGGATGAAG-------TACT-CTGCCTTCCCT-CAAGCTGATTCAAAAGATTTTAAACATGGAGAGAATT--CATAAAA-----------ATTT-GGGTGAGAG-CATGG--T-GGCGGTCAGCAGC-----AAAGT----AAATTAGTTCCCC---AA-- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16254 235 - 94492 C---------TGAGAAGCAGAGAATGAAG----CTC--TTGACTTT---AGAGTCAAAGCTGAGACCATAAC-TCCAAACTGA-GAACACAGGAA-GCTGTCACG---------TGATCGCCAAGG-TGTAAGGAAAAAGAG-AAT----------------CAGGATGAAG-------TATT-CTGCCTTCCCT-CATGCTGATTCACAAGATTTTAAACATGGAGAGAATT--CATAAAA-----------ATGT-GGGTGAGAG-CATGG--T-GGCAATCAGCAGC-----AAAGT----AAATTAGTTCCCG---GA-- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22894822 206 + 28711273 C---------TTAGAGTGAAAGGATAAAGAGGACTC--TT-------------CCACATCTGAGAACATGAT-GCAAGGTTAA-GAAGAGAAAAA-GTAGCCAAGAGTTGGAGCTGGTGCTCAACA-GATAAAGAGGAGAAA-AGT------------------AGATGAAG-------CACG-CTGCCCTCCAT-CAAGCGAACACTTGAGACATTTTTTAATGGGACAATC--CAAGGGT-----------AGTT--GATGATGG-CAAAGCCT-GG--------------------------------------------- i otoGar3.GL873537 T 19683 C 0 s canFam3.chr9 21521193 270 + 61074082 -CTAATTTAGTGATACAGATAGGATGAAG----ATC--TTGACTATGAAGGAGTCAAGGCAAAGGTCGTGAT-TCCAAATC-A-GGATGCATGAG---TGGCACA---------TGATCCATAAGA-TG-AAAGAAGAAGAG-AATAATAATCCATAAGATTAAGGAAGAAGGGATAAATGGT-CCACATTTCAT-CAAGCTTACTCATTAGCTTGTAAATAGGCAGATGAGT--GACAAAA-----------ACAT-TGGCAATTG-TATGC--T-GGCTTTGAGAAACGTTTGACAGT----AACTTTGTTTCCC---AA-- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 592965 230 - 852752 ---------ACTTGAGGTAGTGGGTGAA-----TTT--TTGATGTC---AGAGTGAAAGCTGAGGACAT----TCAATCATGT-GAATATAAGAA-G-TAACACA---------CAATCCAGATAA-TATAAGGAAAAGAAG---T----------------CAGGGTGAAA-------TAGT-CCACACTCCAT-CAAGCTGATTTATAAGCTTTTAAACATGCAGATGAAT--AACTCC------------ATTT-TGTTGAGAG-CATGC--T-GGATGTCAGT--------AAAGTCTAGAAAGTGGTTTTGT---GGGA i dasNov3.JH570468 C 0 C 0 a score=131622.000000 s hg38.chr17_JH159148v1_alt 56864 17 + 88070 AAGATAAGTC---AGTTGAG s panTro5.chr17 16367740 17 + 83181570 AAGATAAATC---AGTTGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272956 17 + 83442489 AAGATAAGTC---AGTTGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119810 17 + 4267968 AAGATAAGTC---AGTTGAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109472 17 - 2193130 AAGATAAGTC---AGTTGAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169631 20 - 77216781 AGGATCAGTCCCAATTGGAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064173 17 - 80997621 AAGATAAGTC---AGTTGAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122592 17 + 10377808 AAGATAAGTC---AGTCGAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012795 17 - 8458610 AAGATCAGTC---AGTGGAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952799 17 + 75148670 AAGATAAGTC---AGTGGAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218416 17 + 4244037 AAGATCAGTC---AGTCGAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217406 17 + 4569836 AAGATAAGTC---AGTTGAG i colAng1.NW_012122154v1 I 195 C 0 s calJac3.chr5_ACFV01180105_random 7761 17 - 12755 AAGATAAGTC---AGTTGAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874613 17 + 3513951 AAGATAAGTT---AGTAGgg i saiBol1.JH378271 C 0 I 293 s cebCap1.NW_016107543v1 22686 17 - 4077172 AAGATAAGTC---AGTTGAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16489 17 - 94492 AAGACAAGTC---AGTTGAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895028 15 + 28711273 AGAGTGATTT---TGTTG-- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521463 9 + 61074082 ACAGCAATT----------- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593195 16 - 852752 ATGACGGGTC---AGTTGA- i dasNov3.JH570468 C 0 C 0 a score=1215908.000000 s hg38.chr17_JH159148v1_alt 56881 117 + 88070 CAGAA----AGTTGTTGTGTG-AGGAT--GGTGGTTCT---CTTGGGACTTGATCAGCAGCAAAAAGGCTG---ACAGCAGCTGGACACA------------------CAGGTGGGCT---GGAAGCAA----------------GT-GGTCTCACAGCAGGCTGGGC s panTro5.chr17 16367757 132 + 83181570 CTGAA----GGTTGTTGTGTG-AGGAT--GGTAGTTCT---CTTAGGAGTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACGGCAGGCTGGGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16272973 132 + 83442489 CAGAA----AGTTGTTGTGTG-AGGAT--GGTGGTTCT---CTTGGGACTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGTACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAAGT-GGTCTCACAGCAGGCTGGGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119827 132 + 4267968 CAGAA----AGTTGTTGTGTG-AGGAT--GGTGGTTCT---CTTGGGACCTGATCAGCAGCAAAAAGGCTG---ACAGCAGCTGTACACA------------------CAGGTGGGCG---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAgcaggctgggc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109489 128 - 2193130 CAGAG--------GTTGTGTG-AGGAT--GGTAGTTCT---CTTGGGAGTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169651 137 - 77216781 CAGAA----GGTTCTTGTGTT-AGGGACGGGTGGTTCT---CTTGGGATGTTATCAACAGCAAGAAGGCTG---GCAGCAGTT-GTCACA------------------CAGGGTGGCCTTGGAAAGCAAGTGGTCCTGCCAGCAGGT-GGTCTCACAGCAGGCTGGGC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064190 130 - 80997621 CAGCA----AGTTGT--TGTG-AGGAC--GGTGGTTCT---CTTGAGACTTAATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2122609 132 + 10377808 CAGAA----AGTTCTTGTGTG-AGGAC--GGTGGTTCT---CTTGGGACTTGATCAGCAGCAAGAAGGCTG---GCAGCAGTTGGTCACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012812 130 - 8458610 CAGCA----AATTGT--TGTG-AGGAT--GGTGGTTCT---CTTGGGACTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAACAGGT-GGTCTCACAGCAGGCTGGGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952816 133 + 75148670 CAGCA----AATTGT--TGTG-AGGAT--GGTGGTTTT---CTTGGGACTTGATCAGCAGCAAGAAGGCTGGCAGCAGCAGCGGGACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218433 132 + 4244037 CAGAA----AGTTGTTGTGTG-AGGAC--GGTGGTTCT---CTTGGGACTTGATCAGCAGCAGGAAGGCTG---GCAGCAGTTGGTCACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217423 130 + 4569836 CATCA----AGTTGT--TGTG-AGGAC--CGTGGTTCT---CTTGGGACTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGAAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7778 132 - 12755 CAGAA----GGCTGTTGTGTG-AGGAT--GGTGGTCCT---CTTGGGAGTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGCAGCAGGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1874923 132 + 3513951 CAGAA----GATTGCTGTATA-AGGAT--GATGGTCCT---TGGCAATGCTGATCAGCAGCAGGAAGGCTG---GCAGCAGCTGGTTACA------------------CAGGTGGGCT---GGCAGCAAGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i saiBol1.JH378271 I 293 C 0 s cebCap1.NW_016107543v1 22703 132 - 4077172 CAGAA----GGCTGTTGTGTG-AGGAT--GGTGGTTTT---CTTGGGAGTTGATCAGCAGCAAGAAGGCTG---GCAGCAGCTGGACACA------------------CAGGTGGGCT---GGCAGCAGGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16506 132 - 94492 CAGAA----GGCTGTTGTGTG-AGGAT--GGTGGTTCT---CTTGGGAGTTGATCAGCAGCAAGAAGGCTG---GCAGCAGGTGGTCACA------------------CAGGTGGGCC---GGCAGCAGGTGGTCCTG-CAGCAGGT-GGTCTCACAGCAGGCTGGGC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895043 72 + 28711273 CAGGACCTGGGTTGGGGGATGCAAAAC--TGGAATGTG---GCAGGTGCTTGGTCTTCAGCAAGAGTGTTG-----ATCAGC-------------------------------------------------------------------------------------- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521472 96 + 61074082 -----------TTTTTTTTTT-CCGAT--GATGGCTCTAGGCATGGCA----ATCAACAGCAGGAAGGCTG---GCAGCAG----------------------------------------GG---------GTCCTA-CAATAGGTAGGTGTTGCAGTATGGTGGA- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593211 149 - 852752 TAGAA----GGTTGGTCTGTG-CACTT--GGTGGTTTT----TGGCCAGTTGATCAGCAGCAGGAAGGCTG---ACAGCAACTGGACACACAGCAAGGGCTGCTGCAGCAGCTGGGGT---GGCAGCAGGTGGTTCTA-CAGCAGGT-GGTGTGACAGCAGGATGGGT i dasNov3.JH570468 C 0 C 0 a score=13073.000000 s hg38.chr17_JH159148v1_alt 56998 1 + 88070 G s panTro5.chr17 16367889 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273105 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119959 1 + 4267968 g i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109617 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169788 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122741 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012942 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952949 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218565 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217553 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7910 1 - 12755 G i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875055 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22835 1 - 4077172 G i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16638 1 - 94492 G i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895115 1 + 28711273 A i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521568 1 + 61074082 G i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593360 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e macFas5.chr16 28064320 1 - 80997621 I a score=541245.000000 s hg38.chr17_JH159148v1_alt 56999 39 + 88070 GCAGCAGGGCTGGCAGCAGTTGGAGCCACAGCTCTGGTT s panTro5.chr17 16367890 39 + 83181570 GCAGCAGGGCTGGCAGCAGTTGGAGTCACAGCTCTGGTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273106 39 + 83442489 GCAGCAGGGCTGGCAGCAGTTGGAGCCACAGCTCTGGTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119960 39 + 4267968 gcagcagggctggcagcagctggagccacagctcaggtt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109618 39 - 2193130 GCAGCAGGGCTGGCAGCAGCTGGAGCCACAGTTCTGGTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169789 38 - 77216781 GCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCT-GTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064321 39 - 80997621 GCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i macFas5.chr16 I 1 C 0 s macNem1.NW_012014910v1 2122742 39 + 10377808 GCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2012943 39 - 8458610 GCAGCAGGGCTGGCAACAGCTGGATCCATAGCTCTGGTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952950 39 + 75148670 GCAGCAGGGCTGGCAGCAGTTGGATCCATAGCTCTGGTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218566 39 + 4244037 GCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217554 39 + 4569836 GCAGCAGGGCAGGCAGCAGCTGGATCCATAGCTCTGGTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7911 39 - 12755 GCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875056 39 + 3513951 GCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22836 39 - 4077172 GCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i cebCap1.NW_016107543v1 C 0 T 6167 s aotNan1.NW_018505111v1 16639 39 - 94492 GCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895116 39 + 28711273 GCAGGAAGGCTGGCAGCAGCTGGATCCACAGCCCAGGTT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521569 39 + 61074082 GAAGCAAGGATGGCAGCAGCTGGATCTGAAGCCCTGGGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593361 39 - 852752 GCAGCAAGGCTGGCAGCAGCTGGATCCGCAGCTCTGGTG i dasNov3.JH570468 C 0 C 0 a score=309106.000000 s hg38.chr17_JH159148v1_alt 57038 22 + 88070 TAGGCAACCAGGCAGGCAGACA s panTro5.chr17 16367929 22 + 83181570 TAGGCAACCAGGCAGACAGACA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273145 22 + 83442489 GAGGCAACCAGGCAGGCAGACA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4119999 22 + 4267968 taggcaaccaggcaggcagaca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109657 22 - 2193130 TAGGCAACCAGGCAGGCAGACA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169827 22 - 77216781 TAGGCAACCAGGCAGGCAGACA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064360 22 - 80997621 TAGGCAACCAGGCAGGCAGACA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2122781 22 + 10377808 TAGGCAACCAGGCAGGCAGACA i macNem1.NW_012014910v1 C 0 I 3719 s cerAty1.NW_012006043v1 2012982 22 - 8458610 TAGGCAACCAGGCAGGCAGACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64952989 22 + 75148670 TAGGCAACCAGGCAGGCAGACA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218605 22 + 4244037 TAGGCAACCAGGCAGGCAGACA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217593 22 + 4569836 TAGGCAACCAGGCAGGCAGACA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7950 22 - 12755 TAGGCAACCAGGCAGGCAGACA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875095 22 + 3513951 CAGGCAACCGGGCAGGCAGACA i saiBol1.JH378271 C 0 I 12313 s cebCap1.NW_016107543v1 16708 22 - 4077172 TAGGCAACCAGGCAGGCAGACA i cebCap1.NW_016107543v1 T 6167 C 0 s aotNan1.NW_018505111v1 16678 22 - 94492 TAGGCAACCAGGCAGGCAGACA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895155 22 + 28711273 CAGACAGCCAGGCAGGCAGACA i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521608 21 + 61074082 TAGGCATCCAGGCAGGTAAAA- i canFam3.chr9 C 0 I 1 s dasNov3.JH570468 593400 22 - 852752 TTGGCAGCCAGGCAGGCAGCAG i dasNov3.JH570468 C 0 C 0 a score=87735.000000 s hg38.chr17_JH159148v1_alt 57060 11 + 88070 GTTGTGGGGTA s panTro5.chr17 16367951 11 + 83181570 CTTGTGGGGTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273167 11 + 83442489 GTTGTGGGGTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120021 11 + 4267968 gTCGTGGGGTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109679 11 - 2193130 GTCGTGGGGTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169849 11 - 77216781 CATGTGGGGTG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064382 11 - 80997621 CATGTGGGGTG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2013004 11 - 8458610 CATGTGGGGTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953011 11 + 75148670 CATGTGGGGTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218627 11 + 4244037 CACGTGGGGTG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217615 11 + 4569836 CATGTGGGGTG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7972 11 - 12755 CACATGGGGTG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1887430 11 + 3513951 CACGTGGGGTG i saiBol1.JH378271 I 12313 C 0 s cebCap1.NW_016107543v1 16730 11 - 4077172 CATGTGGGATG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16700 11 - 94492 CACGTGGGGTG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895177 11 + 28711273 CAGGTGGGCTG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521630 10 + 61074082 CAGGTAGGCT- i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 593422 11 - 852752 CATGTTGGATG i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2122803 3719 + 10377808 I a score=551433.000000 s hg38.chr17_JH159148v1_alt 57071 49 + 88070 GTAGCAGGTTCTTCTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGCTCTGGTCA------------ s panTro5.chr17 16367962 49 + 83181570 GTAGCAGGTTCTTCTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGCTCTGACCA------------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273178 49 + 83442489 GTAGCAGGTTCTTCTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGCTCTGGTCA------------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120032 49 + 4267968 GTAGCAGGTTCTTCTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGCTCTGGTCA------------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109690 49 - 2193130 GTAGCAGGTTCTTCTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGCTCTGGCAA------------ i nomLeu3.chrUn_GL397460_1 C 0 I 30 s rheMac8.chr16 30169860 49 - 77216781 GTAGCAGGTTCTTCTGCAGTAGACA-GG-----GG-CA-------------------------CAG-GAGCTGATCTGGCCA------------ i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064393 49 - 80997621 ATAGCAGGTTCTTCTGCAGTAGACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126522 50 + 10377808 GTAGCAGGTCCTTCTGCA-TAGACAGGG-----TGCCA-------------------------CAG-GAGCTGATCTGCGCA------------ i macNem1.NW_012014910v1 I 3719 C 0 s cerAty1.NW_012006043v1 2013015 49 - 8458610 GTAGCAGGTCCTCCTGCAGTAGACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953022 49 + 75148670 GTAGCAGGTCCTCCTGCAGTAGACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218638 49 + 4244037 ATAGCAGGTCCTCCTGCAGTAGACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217626 49 + 4569836 ATAGCAGGTTCTTCTGCAGTAGACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 7983 49 - 12755 GTAGCAGGTTCTCGTACAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i calJac3.chr5_ACFV01180105_random C 0 I 3 s saiBol1.JH378271 1887441 49 + 3513951 GTAGCAGGTTCTCGTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i saiBol1.JH378271 C 0 T 18821 s cebCap1.NW_016107543v1 16741 49 - 4077172 GTAGCAGGTTCTGCTACAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16711 49 - 94492 ATAGCAGGTTCTCCTGCAGTACACA-GG-----TG-CA-------------------------CAG-GAGCTGGTCTGGCCA------------ i aotNan1.NW_018505111v1 C 0 I 18 s otoGar3.GL873537 22895188 49 + 28711273 GTAGCAGGTCCTGGTGCAGTAGACA-GG-----TG-CA-------------------------CAG-CTGCTGGGCTGGCAG------------ i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521640 49 + 61074082 GTAAGAGGTTCTACTATAGTACACA-GG-----TG-CA-------------------------CAGCAAGCTGG-CTGGCAA------------ i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593433 91 - 852752 GTAGCAGGTTCTCTGGCAGTACACA-GGGCCACTG-CAAGCTGGCTGGCAGGAGGTTGTGTAGCAG-CAACTGGGGTGGCAGCAAGGCTGGTAG i dasNov3.JH570468 C 0 C 0 a score=138091.000000 s hg38.chr17_JH159148v1_alt 57120 10 + 88070 CAGCTGGACC s panTro5.chr17 16368011 10 + 83181570 CAGCTGGACC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273227 10 + 83442489 CAGCTGGACC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120081 10 + 4267968 CAGCTGGACC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109769 10 - 2193130 CAGCTGGACC i nomLeu3.chrUn_GL397460_1 I 30 C 0 s rheMac8.chr16 30169909 10 - 77216781 CAGCTGGACC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28064442 10 - 80997621 CAGCTGGACC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126572 10 + 10377808 CAGCTGGACC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013064 10 - 8458610 CAGCAGGACC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953071 10 + 75148670 CAGCAGGACC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218687 10 + 4244037 CAGCTGGACC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217675 10 + 4569836 CAGCTGGACC i colAng1.NW_012122154v1 C 0 I 129 s calJac3.chr5_ACFV01180105_random 8035 10 - 12755 CAGCTGGACC i calJac3.chr5_ACFV01180105_random I 3 C 0 s saiBol1.JH378271 1868669 10 + 3513951 CAGCTGGACA i saiBol1.JH378271 T 18821 C 0 s cebCap1.NW_016107543v1 16790 10 - 4077172 CAGCTGGACC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16778 10 - 94492 CAGCTGGACC i aotNan1.NW_018505111v1 I 18 C 0 s otoGar3.GL873537 22895237 10 + 28711273 CAGGAGGTGC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521689 10 + 61074082 CAGCTGGACC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593524 10 - 852752 CAGCTGGATC i dasNov3.JH570468 C 0 C 0 a score=93025.000000 s hg38.chr17_JH159148v1_alt 57130 6 + 88070 CACAGC s panTro5.chr17 16368021 6 + 83181570 CACAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273237 6 + 83442489 CACAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120091 6 + 4267968 CACAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109779 6 - 2193130 CACAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169919 6 - 77216781 CACAGC i rheMac8.chr16 C 0 I 30 s macFas5.chr16 28064452 6 - 80997621 CACAGC i macFas5.chr16 C 0 I 15803 s macNem1.NW_012014910v1 2126582 6 + 10377808 CACAGC i macNem1.NW_012014910v1 C 0 I 29 s cerAty1.NW_012006043v1 2013074 6 - 8458610 CACAGC i cerAty1.NW_012006043v1 C 0 I 30 s chlSab2.chr16 64953081 6 + 75148670 CACAGC i chlSab2.chr16 C 0 I 30 s manLeu1.NW_012106252v1 2218697 6 + 4244037 CACAGC i manLeu1.NW_012106252v1 C 0 I 30 s colAng1.NW_012122154v1 2217814 6 + 4569836 CACAGC i colAng1.NW_012122154v1 I 129 C 0 s calJac3.chr5_ACFV01180105_random 8045 6 - 12755 CGCAGC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868679 6 + 3513951 CACAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16800 6 - 4077172 CACAGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16788 6 - 94492 CGCAGC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895247 6 + 28711273 CACAGC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521699 6 + 61074082 CACAGT i canFam3.chr9 C 0 I 2 s dasNov3.JH570468 593534 6 - 852752 CACAGC i dasNov3.JH570468 C 0 C 0 a score=6990.000000 s hg38.chr17_JH159148v1_alt 57136 3 + 88070 ------------AGG------------------ s panTro5.chr17 16368027 3 + 83181570 ------------AGG------------------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273243 3 + 83442489 ------------AGG------------------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120097 3 + 4267968 ------------AGG------------------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109785 3 - 2193130 ------------AGG------------------ i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169955 3 - 77216781 ------------AGG------------------ i rheMac8.chr16 I 30 C 0 s macFas5.chr16 28080261 3 - 80997621 ------------AGG------------------ i macFas5.chr16 I 15803 C 0 s macNem1.NW_012014910v1 2126617 3 + 10377808 ------------CAG------------------ i macNem1.NW_012014910v1 I 29 C 0 s cerAty1.NW_012006043v1 2013110 3 - 8458610 ------------AGG------------------ i cerAty1.NW_012006043v1 I 30 C 0 s chlSab2.chr16 64953117 3 + 75148670 ------------AGG------------------ i chlSab2.chr16 I 30 C 0 s manLeu1.NW_012106252v1 2218733 3 + 4244037 ------------AGG------------------ i manLeu1.NW_012106252v1 I 30 C 0 s colAng1.NW_012122154v1 2217820 3 + 4569836 ------------AGG------------------ i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8051 3 - 12755 ------------AGG------------------ i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868685 3 + 3513951 ------------AGG------------------ i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16806 3 - 4077172 ------------AGG------------------ i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16794 3 - 94492 ------------AGG------------------ i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895253 3 + 28711273 ------------AAG------------------ i otoGar3.GL873537 C 0 I 19742 s canFam3.chr9 21521707 1 + 61074082 ------------A-------------------- i canFam3.chr9 I 2 C 0 s dasNov3.JH570468 593540 33 - 852752 AGATTTGGCCACAGGAGCTGGATCCACTGCTGG i dasNov3.JH570468 C 0 C 0 a score=510627.000000 s hg38.chr17_JH159148v1_alt 57139 49 + 88070 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT s panTro5.chr17 16368030 49 + 83181570 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273246 49 + 83442489 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAACAGCTGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120100 49 + 4267968 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109788 49 - 2193130 TGGGCTGGCAGCAGGGTGTGCTGCAACAGGAAGGCTGGCAGCAGCTGGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30169958 49 - 77216781 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080264 49 - 80997621 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126620 49 + 10377808 TGGGCTGGCAGCAGGGCGTGCTGCAGCAGGAAGGTGGCAGGCCGCTGGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013113 49 - 8458610 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGACAGCAGCTGGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953120 19 + 75148670 TGGGCTGG------------------------------CAGCAGCTGGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218736 49 + 4244037 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGACAGCAGCTGGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217823 49 + 4569836 AGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8054 49 - 12755 TGGGCTGGCAGCAGGGTGTGCTGCAGCAGGAAGGCTGGCAGCAGCTGGT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868688 34 + 3513951 AGGGCTGGCAGCAGGGTGTGCT---------------GCTGCAGCTGGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 16809 49 - 4077172 TGGGCTGACAGCAGGGTGTGCTACAGCAGGAAGGCTGGCAGCAGCTGGT i cebCap1.NW_016107543v1 C 0 T 11918 s aotNan1.NW_018505111v1 16797 49 - 94492 TGGGCTGGCAGCAAGGCGTGCTGCAGCACGAAGGCTGGCAGCAGCTGGT i aotNan1.NW_018505111v1 C 0 I 27 s otoGar3.GL873537 22914998 47 + 28711273 TGGGCTGGCAGCAGGGTGTGCGGCAGCAGGTGG--TGACAGAGGTGGGT i otoGar3.GL873537 I 19742 I 2 s canFam3.chr9 21521708 33 + 61074082 TTGGTTCATAGC------TACTG---------GACTCACAGCAGCTGA- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593573 49 - 852752 TAGCCTGGCAGCAGGGAGTGCTGCAAAAGGAAGGGCTGCAGCAGCTGGT i dasNov3.JH570468 C 0 C 0 a score=613941.000000 s hg38.chr17_JH159148v1_alt 57188 50 + 88070 CACACAGGTGGGCTGG---------------CAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC s panTro5.chr17 16368079 65 + 83181570 CACACAGGTGGGCTGGCAGCAGGTGGTCCTACAGCAGGTGTTTTGACAGCAAGTT----GGGTGGCAGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273295 50 + 83442489 CACACAGGTGGGCTGG---------------CAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120149 50 + 4267968 CACACAGGTGGGCTGG---------------CAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109837 65 - 2193130 CACACAGGTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTT----GGGTGACAGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170007 50 - 77216781 CACACAGGTGGGCTGG---------------CAGCAAGTGTTTTGACAGCAAGTT----GGGCGGCAGC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080313 50 - 80997621 CACACAGGTGGGCTGG---------------CAGCAAGTGTTTTGACAGCAAGTT----GGGCGGCAGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126669 53 + 10377808 CACACAGGTGGGCTGG---------------CAGCAAGTGTTTTGACA-CAAGTTTTGCGGCTGGCAGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013162 50 - 8458610 CACACAGATGGGCTGG---------------CAGCAGGTGTTTTGACAGCAAATT----GGGTGGCAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953139 50 + 75148670 CACACAGGTGGGCTGG---------------CAGCAGGTGTTTTGACAGCAACTT----GGGTGACAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2218785 50 + 4244037 CACACAGGTGGGCTGG---------------CAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i manLeu1.NW_012106252v1 C 0 I 8078 s colAng1.NW_012122154v1 2217872 50 + 4569836 CACACAGGTGGGCTGG---------------CAGCAGGTGTTTTGACAACAAATT----GGGCGGCAGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8103 65 - 12755 CACACAGGTGGGCTGGCAGCAGGTGGTCCCGCAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868722 65 + 3513951 CACACAGGTGGGCTTCCAGCAGGTAGTCCTGCAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 4940 65 - 4077172 CACACAGGTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i cebCap1.NW_016107543v1 T 11918 C 0 s aotNan1.NW_018505111v1 16873 65 - 94492 CACACAGGTGGGCTGGCAACAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTT----GGGCGGCAGC i aotNan1.NW_018505111v1 I 27 C 0 s otoGar3.GL873537 22915047 50 + 28711273 CCAGCAGGTGGTCCTG---------------CAGCAGGTGGTTGGACAGCAAGTT----GGGGGGCAGC i otoGar3.GL873537 I 2 C 0 s canFam3.chr9 21521741 49 + 61074082 -GAGCAGGTAGACCTT---------------CAGCAAGTGGTTTGACTTCATGTT----GGAGGTAAGC i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593622 65 - 852752 CACACAGGTTGGCTGGCAGCAGGTGGCCCTACTGCAGGTGGTCTGACAGCACAGT----GGGCGGCAGC i dasNov3.JH570468 C 0 C 0 a score=393533.000000 s hg38.chr17_JH159148v1_alt 57238 34 + 88070 AAGGCTGGCAGC-AGCTGGAAACACAGCA--------------------------GGAGGG s panTro5.chr17 16368144 34 + 83181570 AAGGCTGGCAGC-AGCTGGAAACACAGCA--------------------------GGAGGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273345 34 + 83442489 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120199 34 + 4267968 AAGGCTGGCAGC-AGCTGGAAACACAGCA--------------------------GGAGGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109902 34 - 2193130 AAGGCTGGCAGC-AACTGGACACACAGCA--------------------------GGAGGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170057 34 - 77216781 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGTGGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080363 34 - 80997621 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGTGGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126722 60 + 10377808 -AGGCTGGCAGCAAGCTGGACACACAGCAGAGGGGCTGGAGCAGCTGGCACAAGCGGTGGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013212 34 - 8458610 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953189 34 + 75148670 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226913 34 + 4244037 AAGGCTGGCAAC-AGCTGGACACACAGCA--------------------------GGAGGG i manLeu1.NW_012106252v1 I 8078 C 0 s colAng1.NW_012122154v1 2217922 34 + 4569836 AAGGCTGGCAAC-AGCTGGACACACAGCA--------------------------GGAGGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8168 34 - 12755 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1868787 34 + 3513951 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i saiBol1.JH378271 C 0 I 18939 s cebCap1.NW_016107543v1 5005 34 - 4077172 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16938 34 - 94492 AAGGCTGGCAGC-AGCTGGACACACAGCA--------------------------GGAGGG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915097 19 + 28711273 AGGGCTGGCAGC-AGCTGGG----------------------------------------- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521790 28 + 61074082 AAGGCTGATAAT-AGCTGGACCCATAGCA-------------------------------- i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593687 29 - 852752 AAGGCTGGCAGC-AGCTGGACCCACAAGA--------------------------A----- i dasNov3.JH570468 C 0 C 0 a score=156813.000000 s hg38.chr17_JH159148v1_alt 57272 15 + 88070 CTGGCAGCAGGGTGT s panTro5.chr17 16368178 15 + 83181570 CTGGCAACAGGGTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273379 15 + 83442489 CTGGCAGCAGGGTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120233 15 + 4267968 CTGGCAGCAGGGTGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109936 15 - 2193130 CTGGCAGCAGGGTGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170091 15 - 77216781 CTGGCAGCAGGGTGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080397 15 - 80997621 CTGGCAGCAGGGTGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126782 15 + 10377808 CTGGCAGAAGGGTGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013246 15 - 8458610 CTGGCAGCAGGGTGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953223 15 + 75148670 CTGGCAGCAGGGTGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226947 15 + 4244037 CTGGCAGCAGGGTGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217956 15 + 4569836 CTGGCAGCAGGGTGT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8202 15 - 12755 CTGGCAGCAGGGTGT i calJac3.chr5_ACFV01180105_random C 0 C 0 s cebCap1.NW_016107543v1 5039 15 - 4077172 CTGGCAGCAGGGTGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16972 15 - 94492 CTGGCAGCAGGGTGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915116 15 + 28711273 CTGGCAGCAGGGTGT i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521818 1 + 61074082 --------------T i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593716 5 - 852752 CTGGA---------- i dasNov3.JH570468 C 0 C 0 e saiBol1.JH378271 1868821 18939 + 3513951 I a score=56278.000000 s hg38.chr17_JH159148v1_alt 57287 5 + 88070 GCTGC s panTro5.chr17 16368193 5 + 83181570 GCTGC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273394 5 + 83442489 GCTGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120248 5 + 4267968 GCTTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109951 5 - 2193130 GCTGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170106 5 - 77216781 GCTGC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080412 5 - 80997621 GCTGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126797 5 + 10377808 GTTGC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013261 5 - 8458610 GCTGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953238 5 + 75148670 GCTGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226962 5 + 4244037 GCTGC i manLeu1.NW_012106252v1 C 0 T 34404 s colAng1.NW_012122154v1 2217971 5 + 4569836 GCTGC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8217 5 - 12755 GCTGC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1887760 5 + 3513951 GCTGC i saiBol1.JH378271 I 18939 C 0 s cebCap1.NW_016107543v1 5054 5 - 4077172 GCTGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16987 5 - 94492 GCTGC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915131 5 + 28711273 GCTGC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521819 3 + 61074082 GTT-- i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 593721 0 - 852752 C a score=77666.000000 s hg38.chr17_JH159148v1_alt 57292 12 + 88070 T---------------------------GCAGG---TGGTCA s panTro5.chr17 16368198 12 + 83181570 T---------------------------GCAGG---TGGTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273399 12 + 83442489 T---------------------------GCAGG---TGGTCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120253 12 + 4267968 T---------------------------GCAGG---TGGTCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109956 12 - 2193130 G---------------------------GCAGG---TGGTCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170111 12 - 77216781 T---------------------------GCAGG---TGGTCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080417 12 - 80997621 T---------------------------GCAGG---TGGTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126802 15 + 10377808 T---------------------------GCCAGGCTTGGTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013266 12 - 8458610 T---------------------------GCAGG---TGGTCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64953243 12 + 75148670 T---------------------------GCAGG---TGGTCA i chlSab2.chr16 C 0 I 2954 s manLeu1.NW_012106252v1 2192563 12 + 4244037 T---------------------------GCAGG---TGGTCA i manLeu1.NW_012106252v1 T 34404 C 0 s colAng1.NW_012122154v1 2217976 12 + 4569836 T---------------------------GCAGG---TGGTCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8222 12 - 12755 A---------------------------GCAGC---TGGTCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1887765 12 + 3513951 T---------------------------GCAGC---TGGTCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5059 12 - 4077172 T---------------------------GCAGC---TGGTCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16992 39 - 94492 TGCATGTGGTCACACAGGTGGGCTGGCAGCAGC---TGGTCG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915136 9 + 28711273 ---------------------------AGCAGG---TGG--- i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521822 6 + 61074082 ------------------------------------TGTCCA i canFam3.chr9 C 0 C 0 e dasNov3.JH570468 593721 0 - 852752 C a score=80919.000000 s hg38.chr17_JH159148v1_alt 57304 14 + 88070 C-AGTG-GTGGGCTT-C s panTro5.chr17 16368210 14 + 83181570 C-AGTG-GTGGGCTG-C i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273411 14 + 83442489 C-AGTG-GTGGGCTT-C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120265 14 + 4267968 C-AGTG-GTGGGCTT-C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109968 14 - 2193130 C-AGTT-GTGGGCTG-C i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170123 14 - 77216781 C-ACAG-GTGGGCTT-C i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080429 14 - 80997621 C-ACAG-GTGGGCTT-C i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126817 17 + 10377808 CAACAGAGTGGGCTTCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013278 14 - 8458610 C-ACAG-GTGGGCTT-C i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2192575 14 + 4244037 C-ACAG-GTGGGCTT-C i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2217988 14 + 4569836 C-AGTG-GTGGGCTT-C i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8234 14 - 12755 C-ACAG-GTGGGCTT-C i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1887777 14 + 3513951 C-ACAG-GTGGGCTT-C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5071 14 - 4077172 C-ACAG-GTGGGCTT-C i cebCap1.NW_016107543v1 C 0 I 18115 s aotNan1.NW_018505111v1 17031 14 - 94492 C-ACAG-GTGGGCTT-C i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915145 5 + 28711273 -----------GCCT-C i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521828 14 + 61074082 C-AGCT-ACTGGTTC-C i canFam3.chr9 C 0 I 1 e dasNov3.JH570468 593721 0 - 852752 C e chlSab2.chr16 64953255 2954 + 75148670 I a score=144847.000000 s hg38.chr17_JH159148v1_alt 57318 13 + 88070 CAGCAGG--TGGTCC s panTro5.chr17 16368224 13 + 83181570 CAGCAGG--TGGTCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273425 13 + 83442489 CAGCAGG--TGGTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120279 13 + 4267968 CAGCAGG--TGGTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109982 13 - 2193130 CAGCAGG--TGGTCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170137 13 - 77216781 CAGCAGG--TGGTCC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080443 13 - 80997621 CAGCAGG--TGGTCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126834 15 + 10377808 CAGCAGGCCTGGTCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013292 13 - 8458610 CAGCAGG--TGGTCC i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2192589 13 + 4244037 CAGCAGG--TGGTCC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218002 13 + 4569836 CAGCAGG--TGGTCC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8248 13 - 12755 CAGCAGG--TGGTCC i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1887791 13 + 3513951 CAGCAGG--TGGTCC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 23200 13 - 4077172 CAGCAGG--TGGTCC i cebCap1.NW_016107543v1 I 18115 C 0 s aotNan1.NW_018505111v1 17045 13 - 94492 CAGCAGG--TGGTCC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915150 13 + 28711273 CAGCAGG--TGGTCC i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521843 13 + 61074082 AAGCAGG--TAGGCT i canFam3.chr9 I 1 C 0 s dasNov3.JH570468 593721 2 - 852752 -------------CC i dasNov3.JH570468 C 0 C 0 e chlSab2.chr16 64953255 2954 + 75148670 I a score=261045.000000 s hg38.chr17_JH159148v1_alt 57331 24 + 88070 TGCAGCAGGTGGTCCTGCAGCATG s panTro5.chr17 16368237 9 + 83181570 TGCAGCAG---------------G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273438 24 + 83442489 TGCAGCAGGTGGTCCTGCAGCACG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120292 24 + 4267968 TGCAGCAGGTGGTCCTGCAGCACG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2109995 9 - 2193130 TGCAGCAG---------------G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170150 24 - 77216781 TGCAGCAGGTGGTCCTGCAGCACG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080456 24 - 80997621 TGCAGCAGGTGGTCCTGCAGCACG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126849 24 + 10377808 TGCAGCAGGTGGTCCTGCAGCACG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013305 24 - 8458610 TGCAGCAGGTGGTCCTGCAGCATG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64956209 24 + 75148670 TGCAGCAGGTGGTCCTGCAGCATG i chlSab2.chr16 I 2954 C 0 s manLeu1.NW_012106252v1 2192602 24 + 4244037 TGCAGCAGGTGGTCCTGCAGCACG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218015 24 + 4569836 TGCAGCAGGTGGTCCTACAACACG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8261 24 - 12755 TGCAGCAGGTGGTCCGGCAGCACG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1887804 24 + 3513951 TGCAGCAGGTGGTCCTGCAGCACG i saiBol1.JH378271 C 0 T 12289 s cebCap1.NW_016107543v1 23213 24 - 4077172 TGCAGCAGGTGGTCCTGCAGCACG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 17058 24 - 94492 TGCAGCAGGTGGTCCTGCAGCACG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915163 24 + 28711273 TACAGCAGGTTGTCCTGCAGCAGG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521856 24 + 61074082 GGCAGCAGATGGTCCCATGACACA i canFam3.chr9 C 0 C 0 s dasNov3.JH570468 593723 24 - 852752 CACAACAGGTGGACTGGCAGCAGG i dasNov3.JH570468 C 0 C 0 a score=828782.000000 s hg38.chr17_JH159148v1_alt 57355 69 + 88070 TAGGCTGACAGCAAGGGGAGCAAC--AGT--GGG--TCATGGTGTCAGGGGTAGAGGG-TGGGCTTCTGTTCAGAG s panTro5.chr17 16368246 69 + 83181570 TAGGCTGACAGCAAGGGGAGCAAC--AGT--GGG--TCATGGTGTCAGGGATGGAGGG-TGGGCTTCTGTTAAGAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273462 69 + 83442489 TAGGCTGACAGCATGGGGAGCAAC--AGT--GGG--TCATGGTGTCAGGGGTAGAGGG-TGGGCTTCTGTTCAGAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120316 69 + 4267968 TAGGCTGACAGCAAGGGGAGCAAC--AGT--GGG--TCATGGTGTCAGGAGTAGAGGG-TGGGCTTCTGTTCAGAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110004 69 - 2193130 TGGGCTGACAGCAAGGGGAGCAAC--AGT--AGG--TCATGGTGTCAGGGGTGGAGGG-TGGGCTTCTGTTCAGAT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170174 69 - 77216781 TAGGCTGACAGCAAGGGGAGCAAC--AGT--TGG--TCATGGTGTCAGGGGTGGAAGG-TGGGCTTCTGTTCAGAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080480 69 - 80997621 TAGGCTGACAGCAAGGGGAGCAAC--AGT--TGG--TCATGGTGTCAGGGGTGGAAGG-TGGGCTTCTGTTCAGAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126873 72 + 10377808 TA-GCTGACAGCAAGGGGACGCAC--AGTCATGGATCCATGGTGTCAGCGTGGGAAAG-GTGGGTTCTGTTCAGAG i macNem1.NW_012014910v1 C 0 I 1 s cerAty1.NW_012006043v1 2013329 69 - 8458610 TAGGCTGACAGCAAGGGGAGCAAC--AGT--TGG--TCATGGTGTCCGGGGTGGAGGG-TGGGCTTCTGTTCAGAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64956233 69 + 75148670 TAGGCTGACAGCAAGGGGAGCAAC--AGT--TGG--TCATGGTGTCAGGGGTGGAGGG-TGGGTTTCTAATCAGAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192626 69 + 4244037 TAGGCTGACAGCAAGGGGAGCAAC--AGT--TGG--TCATGGTGTCAGGGATGGAGGG-TGGGCTTCTGTTCAGAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218039 69 + 4569836 TAGGCTGACAGCAAGGGGAGCAAC--AGT--TGG--TCATGGTGTCAGGGGTGGAGGA-TGGGCTTCTGTTCATAG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8285 69 - 12755 TAGGCTGGCAGCAAGGGGAGCAGC--AGT--GGG--TCATGGTGTCAGGTGGGGAGTG-TGGGCTCCTGTTCAGAG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875539 69 + 3513951 TAGGCTGGCAGCAAGGGGAGCAGC--AGT--GGG--TCATGGTGTCAGGGGTGGATGG-TGGGCTCCTGTTCAGAG i saiBol1.JH378271 T 12289 C 0 s cebCap1.NW_016107543v1 23237 69 - 4077172 TAGGCTGGCAGCAAGGGGAGCAGC--AGT--AGG--TCATGGTGTCAGGGGTGGAGGG-TGGGCTTCTGTTCAGAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 17082 69 - 94492 TAGGCTGGCAGCAAGGGGAGCAGC--AGT--GGG--TCATGGTGTCAGGGGTGGAGGG-TGGGCTCCTGTTCAGAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915187 69 + 28711273 TGGGCTGGCAGCAAGGGGAGCAGC--AGT--GGG--TCATGTTATCCTGTGTGGAGGA-TGGGTTCTTGTTTAGAG i otoGar3.GL873537 C 0 C 0 s canFam3.chr9 21521880 72 + 61074082 TAAGCTGGTACCAAGGAAAGCAACAGAGT--GGC--TCATGGTCTCAGGTATAGGGCATTGAGTTTCTGTGGAGAG i canFam3.chr9 C 0 N 0 s dasNov3.JH570468 593747 66 - 852752 TGGGCTGGCAGCAGGGAGAGCAGC--AGG--AGG--TCATGGCATCAGG-GTGGAGGG---GGCTCGTGTTCAGAG i dasNov3.JH570468 C 0 C 0 a score=83865.000000 s hg38.chr17_JH159148v1_alt 57424 7 + 88070 GTGAGTT s panTro5.chr17 16368315 7 + 83181570 GTGAGTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273531 7 + 83442489 GTGAGTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120385 7 + 4267968 GTGAGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110073 7 - 2193130 GTGAGTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170243 7 - 77216781 GTGAATT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080549 7 - 80997621 GTGAATT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2126946 7 + 10377808 GTAATTT i macNem1.NW_012014910v1 I 1 C 0 s cerAty1.NW_012006043v1 2013398 7 - 8458610 GTGAGTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64956302 7 + 75148670 GTGAGTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2192695 7 + 4244037 GTGAGTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218108 7 + 4569836 GTGAGTT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8354 7 - 12755 GTGAGTT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875608 7 + 3513951 GTGAGTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 23306 7 - 4077172 GTGAGTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 17151 7 - 94492 GTGAGTT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915256 7 + 28711273 GTGAGTT i otoGar3.GL873537 C 0 T 19640 s dasNov3.JH570468 593813 5 - 852752 --GTGTT i dasNov3.JH570468 C 0 C 0 a score=1235858.000000 s hg38.chr17_JH159148v1_alt 57431 107 + 88070 TCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTT--CCGTTTACATTGTTTTCC s panTro5.chr17 16368322 107 + 83181570 TCCCAAAATCTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AATTTTCCACCAATCAGCAGGACTTTTCCTTGTTG--CTGTTTACATTGTTTTCC i panTro5.chr17 C 0 I 1 s panPan2.chr17 16273538 107 + 83442489 TCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTT--CTGTTTACATTGTTTTCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120392 107 + 4267968 TCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTT--CCGTTTACATTGTTTTCC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110080 107 - 2193130 TCCCAGAATCTGATGACCGCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACTAATCAGCAGGACTTTTCCTTGTTG--CTGTTTACATTGTTTTCC i nomLeu3.chrUn_GL397460_1 C 0 I 1 s rheMac8.chr16 30170250 107 - 77216781 TCCCAGAATCTGATGACCCCTTGCAATCGGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTG--CTATTTACATTGTTTTCC i rheMac8.chr16 C 0 I 1 s macFas5.chr16 28080556 107 - 80997621 TCCCAGAATCTGATGACCCCTTGCAATCGGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTG--CTATTTACATTGTTTTCC i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2126953 109 + 10377808 TCCCAGATCTTGATGACCCCTTGCATCTGGACCACTTTATACACCTGGCCTCCAACAGGTTTCCACCAATCAGCAGGATATTTCCTTGTTGGCTTATTTAC--TGTTTCCC i macNem1.NW_012014910v1 C 0 T 10564 s cerAty1.NW_012006043v1 2013405 106 - 8458610 TCCCAGAATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCA-GACTTTTCCTTGCTG--CTGTTTACATTGTTTTCC i cerAty1.NW_012006043v1 C 0 I 1 s chlSab2.chr16 64956309 107 + 75148670 TCCCAGAATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTG--CTGTTTACATTGTTTTCC i chlSab2.chr16 C 0 I 1 s manLeu1.NW_012106252v1 2192702 107 + 4244037 TCCCAGAATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTG--CTGTTTACATTGTTTTCC i manLeu1.NW_012106252v1 C 0 I 1 s colAng1.NW_012122154v1 2218115 107 + 4569836 TCCCAGAATCTGATGACCCCTTGCAATCTAGACCTTTTATACACCTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGCTG--CTGTTTACATTGTTTTCC i colAng1.NW_012122154v1 C 0 I 1 s calJac3.chr5_ACFV01180105_random 8361 107 - 12755 TCCCAAAATCTGAGAACTCCTTCCAATCTGGGCCTTTTATACATGTGGCCTCCA--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTG--CTGTTTACATTGTTTTCC i calJac3.chr5_ACFV01180105_random C 0 I 1 s saiBol1.JH378271 1875615 107 + 3513951 TCCCAGAATCTGATGACTCCTTCCAATCTGGGCCTTTTATACATCTGGCCTCCA--ACGTTTCCACCAATCAGCAGGACTTCTCATTGTTG--CTGTTTACATTGTTTTCT i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 23313 107 - 4077172 TCCCAGAATCTGGTGACCCCTTCCCATCTGGACCTTTTATCCACCTGGCCTCTG--AAGCTTCCACCAATCAGCAGGACTTTTCCTTGTTG--CTGTTTACATTGCTTTCA i cebCap1.NW_016107543v1 C 0 I 1 s aotNan1.NW_018505111v1 17158 107 - 94492 TCCCAGAATTTGATGACCCCTTCCAATCTGGACCTTTTATACACCTGGCCTCCG--AAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTG--TTGTTTACATTGTTTTCT i aotNan1.NW_018505111v1 C 0 I 1 s otoGar3.GL873537 22895623 107 + 28711273 TCCCAGAATCTGCTGATGCCTTCCAATGTGGACCTTTTATACACTGGGCCTCCA--AAGTTTGGACCAATGGGCAGAATTTTTCCTTGTTG--TTGTTGACACTGTTTTCC i otoGar3.GL873537 T 19640 I 8 s dasNov3.JH570468 593818 106 - 852752 TCCCAGAATCTGATGGCTCCTTTAATTCTGCATCTTTTATACAC-TGGCCTCCA--ATATTTGGACTGATAGGCAGGTCTATTTCTTGTTG--TTGTTGACATTGTTTCCT i dasNov3.JH570468 C 0 C 0 a score=197781.000000 s hg38.chr17_JH159148v1_alt 57538 26 + 88070 ------CAGTCCGTTTGTGATTCTCAAAGGGT s panTro5.chr17 16368430 26 + 83181570 ------CAGTCCATTTGGGATTGTCAAAGGGG i panTro5.chr17 I 1 T 5511 s panPan2.chr17 16273645 26 + 83442489 ------CAGTCCATTTGTGATTCTCAAAGGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120499 26 + 4267968 ------CAGTCCATTTGTAATTCTCAAAGGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110188 26 - 2193130 ------CAGTCTGTTTGGGATTGTCAAAGGGG i nomLeu3.chrUn_GL397460_1 I 1 I 1 s rheMac8.chr16 30170358 26 - 77216781 ------CAATCCTTTTGGGATTGTCAAAGGGG i rheMac8.chr16 I 1 C 0 s macFas5.chr16 28080664 26 - 80997621 ------CAATCCTTTTGGGATTGTCAAAGGGG i macFas5.chr16 I 1 C 0 s macNem1.NW_012014910v1 2116498 26 + 10377808 ------CAGTGCGTTTGTGATTCTCAAAGGGT i macNem1.NW_012014910v1 T 10564 C 0 s cerAty1.NW_012006043v1 2013512 26 - 8458610 ------CAGTGCATTTGTGATTCTCAAAGGGT i cerAty1.NW_012006043v1 I 1 C 0 s chlSab2.chr16 64956417 26 + 75148670 ------CAGTCCTTTTGGGATTTTCAAAGGGG i chlSab2.chr16 I 1 I 5298 s manLeu1.NW_012106252v1 2192810 26 + 4244037 ------CAGTGCATTTGTGATTCTCAAAGGGT i manLeu1.NW_012106252v1 I 1 C 0 s colAng1.NW_012122154v1 2218223 26 + 4569836 ------TAGTATGTTTGTGATTCTCAAAGGGT i colAng1.NW_012122154v1 I 1 C 0 s calJac3.chr5_ACFV01180105_random 8469 26 - 12755 ------CAGTCCGATTGGGATTGTCTAAGGGG i calJac3.chr5_ACFV01180105_random I 1 I 1 s saiBol1.JH378271 1875723 26 + 3513951 ------TAGTCAGTTTGGGATTATCAAAGAGG i saiBol1.JH378271 I 1 I 1 s cebCap1.NW_016107543v1 23421 26 - 4077172 ------CAGTCTGTTTAGGATTGTCAAAGGGG i cebCap1.NW_016107543v1 I 1 I 30 s aotNan1.NW_018505111v1 17266 26 - 94492 ------CAGTCAGTTTGGGATTGTCAAAGGGG i aotNan1.NW_018505111v1 I 1 I 1 s otoGar3.GL873537 22895738 20 + 28711273 ------CAGCT------GAATTATGAAGGAGG i otoGar3.GL873537 I 8 I 1 s dasNov3.JH570468 593924 27 - 852752 TAGATGCAAAGCAC-----ATTGTCAAGGAGG i dasNov3.JH570468 C 0 C 0 a score=88756.000000 s hg38.chr17_JH159148v1_alt 57564 19 + 88070 AGTTGTTTCCTTAAG------------GTTA s panTro5.chr17 16362945 19 + 83181570 AGTTGTTTCCTTAAG------------GTTA i panTro5.chr17 T 5511 C 0 s panPan2.chr17 16273671 19 + 83442489 AGTTGTTTCCTTAAG------------GTTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120525 19 + 4267968 AATTGTTTCCTTAAG------------GTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110215 19 - 2193130 AGTTGTTTCTGAAAT------------CTTA i nomLeu3.chrUn_GL397460_1 I 1 I 2 s rheMac8.chr16 30170384 20 - 77216781 AAGTTCTTTCTTAAAA-----------GTTA i rheMac8.chr16 C 0 I 20 s macFas5.chr16 28080690 31 - 80997621 AAGTTCTTTCTTAAAAGTTATGAATCTGTTG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116524 19 + 10377808 AGTTGCTTCCTTAAG------------GTTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013538 19 - 8458610 AGTTGTTTCCTTAAG------------GTTA i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2192836 19 + 4244037 AGTTGTTTCCTTAAG------------GTTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218249 19 + 4569836 AGTTGTTTCCTTAAG------------GTTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8496 19 - 12755 AGTTGTTTTTGAAAT------------CTTA i calJac3.chr5_ACFV01180105_random I 1 I 10 s saiBol1.JH378271 1875750 19 + 3513951 AGTCATTTACTAAAT------------GCTA i saiBol1.JH378271 I 1 I 10 s aotNan1.NW_018505111v1 17293 19 - 94492 AGTTGCTTCTGAAAT------------CTGA i aotNan1.NW_018505111v1 I 1 I 10 s otoGar3.GL873537 22895759 19 + 28711273 AGTTGTTTCCTAAGT------------GTTG i otoGar3.GL873537 I 1 C 0 s dasNov3.JH570468 593951 19 - 852752 AAGTTTTTCCTGATG------------TTTT i dasNov3.JH570468 C 0 C 0 e cebCap1.NW_016107543v1 23447 30 - 4077172 I e chlSab2.chr16 64956443 5298 + 75148670 I a score=4664.000000 s hg38.chr17_JH159148v1_alt 57583 1 + 88070 A s panTro5.chr17 16362964 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273690 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120544 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110236 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 I 2 C 0 s macFas5.chr16 28080721 1 - 80997621 A i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116543 1 + 10377808 A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013557 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2192855 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218268 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22895778 1 + 28711273 A i otoGar3.GL873537 C 0 I 8 s dasNov3.JH570468 593970 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17312 10 - 94492 I e cebCap1.NW_016107543v1 23447 30 - 4077172 I e saiBol1.JH378271 1875769 10 + 3513951 I e calJac3.chr5_ACFV01180105_random 8515 10 - 12755 I e chlSab2.chr16 64956443 5298 + 75148670 I e rheMac8.chr16 30170404 20 - 77216781 I a score=11942.000000 s hg38.chr17_JH159148v1_alt 57584 9 + 88070 -------ACAGATTAA s panTro5.chr17 16362965 9 + 83181570 -------ACAGATTAA i panTro5.chr17 C 0 I 5520 s panPan2.chr17 16273691 9 + 83442489 -------ACAGATTAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120545 9 + 4267968 -------ACAGATTAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110237 9 - 2193130 -------ACCTTTTAA i nomLeu3.chrUn_GL397460_1 C 0 I 6 s macFas5.chr16 28080722 6 - 80997621 -------A---AGTAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2116544 9 + 10377808 -------ACAGACTAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013558 9 - 8458610 -------ACAGATTAA i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2192856 9 + 4244037 -------ACAGATTAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218269 9 + 4569836 -------ACAGATTAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8525 8 - 12755 --------GAAAGTAA i calJac3.chr5_ACFV01180105_random I 10 I 1 s saiBol1.JH378271 1875779 8 + 3513951 --------GAAAGTAA i saiBol1.JH378271 I 10 I 1 s cebCap1.NW_016107543v1 23477 8 - 4077172 --------AAAAGTAA i cebCap1.NW_016107543v1 I 30 I 1 s aotNan1.NW_018505111v1 17322 8 - 94492 --------AAAAGTAA i aotNan1.NW_018505111v1 I 10 I 1 s otoGar3.GL873537 22895787 9 + 28711273 -------CAATAGTAA i otoGar3.GL873537 I 8 C 0 s dasNov3.JH570468 593971 16 - 852752 CTTCTGTTCAATGTAA i dasNov3.JH570468 C 0 C 0 e chlSab2.chr16 64956443 5298 + 75148670 I e rheMac8.chr16 30170404 20 - 77216781 I a score=10035.000000 s hg38.chr17_JH159148v1_alt 57593 1 + 88070 G s panTro5.chr17 16368494 1 + 83181570 G i panTro5.chr17 I 5520 C 0 s panPan2.chr17 16273700 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120554 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110252 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 I 6 C 0 s macFas5.chr16 28080728 1 - 80997621 G i macFas5.chr16 C 0 I 1 s macNem1.NW_012014910v1 2116553 1 + 10377808 G i macNem1.NW_012014910v1 C 0 I 10578 s cerAty1.NW_012006043v1 2013567 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2192865 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 I 26417 s colAng1.NW_012122154v1 2218278 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8534 1 - 12755 G i calJac3.chr5_ACFV01180105_random I 1 C 0 s saiBol1.JH378271 1875788 1 + 3513951 A i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 23486 1 - 4077172 G i cebCap1.NW_016107543v1 I 1 C 0 s aotNan1.NW_018505111v1 17331 1 - 94492 G i aotNan1.NW_018505111v1 I 1 C 0 s otoGar3.GL873537 22895796 1 + 28711273 G i otoGar3.GL873537 C 0 I 1 s dasNov3.JH570468 593987 1 - 852752 G i dasNov3.JH570468 C 0 I 1 e chlSab2.chr16 64956443 5298 + 75148670 I e rheMac8.chr16 30170404 20 - 77216781 I a score=1798884.000000 s hg38.chr17_JH159148v1_alt 57594 184 + 88070 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGACACTTTGTTTCAGATAAAAGGAAGGCAATCTCATCATCAGCATCATTCCTGTTCTGACCATCATCTGGTCATGTGA--TAGTTCCTGTTGATCTGGGAGGCTCAGGA-AGTT-------------CTCTCTGGCCAGCCTCAT--G-TTTGGCTGTATGTAGACTGG s panTro5.chr17 16368495 182 + 83181570 GTTTAATCTGTTTCTTAATTGTGAGTTACTCATAGAAAGTTTGTTTCAGATAAAAGGAAGCCCGTCTCATCATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA--TAGTTCCTGGTGATCCGGGAGG--CAGAT-AGTT-------------CTCTCTGTCCAGCCTCAT--G-TTTGGCTGTATGTAGACTGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273701 184 + 83442489 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGACACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGTTCTGACCATCATCTGGTCATGTGA--TAGTTCCTTTTGATCTGGGAGGCTCAGGA-AGTT-------------CTCTCTGTCCAGCCTCGT--G-GCTGGCTGTATGTAGACTGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120555 184 + 4267968 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGACACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGTTCTGACCATCATCTGGTCATGTGA--TAGTTCCTGTTGATCTGGGAGGCACAGGA-AGTT-------------CTCTCTGTCCAGCCTCAT--G-GCTGGCTGTATGTAGACTGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110253 184 - 2193130 GTTCAATCTGTTTCTTAATTGTGAGTTACTCATAGAAAGTTTGTTTCAGATAAAAGGAAGGCAGTCTCGTCATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA--TAGTTCCTGTTGATCTGGGAGGCTCAGGA-AGTT-------------CTCTCTGCCCAGCCTCAT--G-GTTGGCTGTATGTAGCCTGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170424 184 - 77216781 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTTGTTTCAGATGAAAGGAAGCCCCTCTCATCATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCATGTGA--TAGGTCCTGGTAATATGGGAGACTCACGT-ACTT-------------CTTTCTGCCCAGCCTCAC--G-GTTGGCTGAATGTGGTCTGA i rheMac8.chr16 I 20 C 0 s macFas5.chr16 28080730 184 - 80997621 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCGTTTCAGATGAAAGGAAGCCCATCTCATCATCAGCATCATTCCTGCTCTGACAATCATCTGGTCATGTGA--TAGGTCCTGGTAATATGGGAGACTCACGT-ACTT-------------CTCTCTGCCCAGCCTCAC--G-GTTGGCTGAATGTGGTCTGA i macFas5.chr16 I 1 C 0 s macNem1.NW_012014910v1 2127132 184 + 10377808 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCGTTTCAGATGAAAGGAAGCCCATCTCATCATCAGCATCATTCCTGCTCTGACAATCATCTGGTCATGTGA--TAGGTCCTGGTAATATGGGAGACTCACGT-ACTT-------------CTCTCTGCCCAGCCTCAC--G-GTTGGCTGAATGTGGTCTGA i macNem1.NW_012014910v1 I 10578 C 0 s cerAty1.NW_012006043v1 2013568 197 - 8458610 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATCTCATCATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCATATGA--TAGTTCCTGGAGATCCGGGAGGCTCAGGA-AGTTCTCTCTGCCCAGCCTCTCTGCCCAGCCTCAT--A-GTTGGCTGTATGTAGACTGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64961741 184 + 75148670 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTTGTTTCAGATGAAAGGAAGCCCATCTCATCATCAGCATCATTCCTGCTCTGACAGTCCTCTGGTGATGTGA--TAGTTCCTGGTGATCCCGGAGGCTCAGGA-AGTT-------------CCGTCTTCCCCGCCTCAT--G-GTTGTCTGTATGTGGCCTGG i chlSab2.chr16 I 5298 C 0 s manLeu1.NW_012106252v1 2219283 184 + 4244037 GTTTAATCTGTTTCTTAATTGTGAATTACTCATAGAAACTTTGTTTCAGATGAAAGGAAGCCCATCTCATCATCAGCATCTTTCCTGCTCTGACTATCGTCTGGTGATGTGA--TAGTTCCTGGTGATCCGGGAGGCTCAGGA-AGTT-------------CTCTCTGCCCAGTCTCAT--G-GTTGTCTGTATGTGTCATGG i manLeu1.NW_012106252v1 I 26417 C 0 s colAng1.NW_012122154v1 2218279 184 + 4569836 GTTTAATCTGTTTCTTAATTGTTAATTACTCATAGAAACTTCGTTTCAGATAAAAGGAAGCCCATTTCATCATCAGCATCTTTCCTGCTCTGACCATCATCTGGTCATATGA--TAGTTCCTGGTGATCTGGGAGGCTCAGGA-AGTT-------------CTCTCTGCCCAGCCTCAT--A-GTTGGCTGTATGTAGACTGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8535 185 - 12755 GTTTAATCTGTTTCTTAATTGTGAGTTACTCATAGAAATGTTGTTTCAAGTAAAAGGAAGGCAGTCTCATCATCAGCATGCTTCCTGCTCTGACCATCATCTTGTCATGTGA--TAGTTCCTGGTGACCAGGGAGGCTCAGGA-AGTT-------------CTCTCTGCCCAGCCTCAT-CT-TTTGGCTGTATGTAGACTGG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875789 185 + 3513951 GTTTAATCTGTTTCTTACTTGTGAATTACTCATAGAAATGTTGTTTTAAGTAAAAGGAAGGCAGTTTCATCAACAGCCTGCTTCCTGCTCTGACCATCATCTTGTCATGTGA--TAGTTCCTGGTGACCAGGGAGGCTCAGGA-AGTT-------------CTCTCTGTCCAGCCTCAT-CC-TTTGGTTGTATGTAGACTGC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 23487 184 - 4077172 GTTTAATCTGTTTCTTAATTGAGAATTAGTCATAGAGACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCACCATTCCTGCTCTGACCTTCATCTGGTCATGTGAGTGAGTTCCTGTGG--TGGGGAGGCTCAGGA-AGTT-------------CTCTCTGCCCAGCCTCAT--G-TTTGACCGTATGCAGACTGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 17332 183 - 94492 GTTTAATCTGTTTCTTAATTGAGAATTAGTCATAGAGACTTTGTTTCAGATACAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGCTCTGACCTTCATCTGGTCACGTGAGTGAGTTCCTGTGG--CTGGGAGGCTCAGGA-AGTT-------------CTCTCTGCCCAGCCTCAT--G-TTTGACTGTATGCAGA-TGA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22895798 183 + 28711273 GTTTAATCTGTTTCTTCATTGAGAATAACTCCTAGAAACTGT-TTTCAGATACAAGGAAAGTGATCACATCATTAGCATTTTTTCTGCTCTGGTCACTTTGTGGTCATGTGA--TAATTCCTGCTG-TCTGGGAGGGTCCAGA-AGTT-------------CTCTCTTCCTAGTCTGTT--GCTTTCCCTGTATGTCTATTGG i otoGar3.GL873537 I 1 T 26666 s dasNov3.JH570468 593989 181 - 852752 GTTTAATCGTTCTCTTAATTAAGAG-AGTTCATAGAA--TTGTTTTTAGACATAAGGAAGGCGGTCATATCCTCAGAA-CATTCCTGTTCTG-TCATCATCT-GTCACGTGA--TAGTTGTCGCTGGCTGGGGAGGGTCCTTACAGTC-------------GTCAATCCCCAGCTTGGTTTC-TTTGGCTGTACTTAGATTTG i dasNov3.JH570468 I 1 C 0 a score=280249.000000 s hg38.chr17_JH159148v1_alt 57778 31 + 88070 GAAGTGTCTGTGGGGAGAAG------------------------------CATGATGCTGA s panTro5.chr17 16368677 31 + 83181570 GAAGTGTCAGTGGGGAGAAG------------------------------CATGATGCTGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273885 31 + 83442489 GAAGTGTCTGTGGGGAGAAG------------------------------CATGATGCTGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120739 31 + 4267968 GAAGTGTCTGTGGGGAGAAG------------------------------CATGATGCTGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110437 31 - 2193130 GAAGTGTCTGTGGGGAGAAG------------------------------CATGATGCTGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170608 31 - 77216781 GAAGTGCCTGTGGGGAGAAG------------------------------TATGATGTTGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080914 31 - 80997621 GAAGTGCCTGTGGGGAGAAG------------------------------TATGATGTTGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127316 31 + 10377808 GAAGTGCCTGTGGGGAGAAG------------------------------TATGATGTTGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013765 31 - 8458610 GAAGTGTCTGTGAGGAGAAT------------------------------CATGATGCTGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64961925 31 + 75148670 GAAGTGTCTGTGGGGAGAAG------------------------------CATGATGCTGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219467 31 + 4244037 GAAGTGTCTGTGGGGAGAAG------------------------------CATGATGCTGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218463 31 + 4569836 GAAGTGTCTGTGAGGAGAAG------------------------------CATGATGCTGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8720 31 - 12755 AAAGCACCTGTGAGGAGAAG------------------------------CATGATGCTAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1875974 61 + 3513951 AAAGCATCTGTGAGGAGATACTATTTCGTGAGGGATAATTTTCACAAAGCCATGATGCTGG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 23671 31 - 4077172 GAGGTGTCTGTGGGCAGGGG------------------------------CATGATGCTGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 17515 31 - 94492 GAAGTGTCTGTGGGCAGGGG------------------------------TGTGATGCTGG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 594170 31 - 852752 CAAGTGCACCTGGCGGTGTA------------------------------CATGATGCTGG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22895981 26666 + 28711273 T a score=861754.000000 s hg38.chr17_JH159148v1_alt 57809 88 + 88070 TATATTTACAGTGACAAAATGAATCCATGCCTGGGCCCAAGACTAGTCACCCACCAAATTCTGACTCAAGACT--AGCAGGCA------TCTCTCT s panTro5.chr17 16368708 88 + 83181570 TATATTTACAGTGACAAAATGAATCCATGCCTGGGCCCAAGACTATTCACCCACCAAATTCTGACTCAAGACT--AACAGGCA------TCTCTCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16273916 88 + 83442489 TATATTTACAGTGAGAAAATGAATCCATGCCTGGGCCAAAGACTAGTCATCCACCAAATTCTGACTCAAGACT--AACAGGCA------TCTCTCT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120770 88 + 4267968 TATATTTACAGTGACAAAATGAATCCATGCCTGGGCCCAAGACTAGTCACCCACCAAATTCTGAGTCAAGACT--AACAGGCA------TCTCTCT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110468 88 - 2193130 TGTATTTACAGTGACAAAATGAATCCATGCCTGGGCCCAAGACTAGTCACCCACCAAATTCTGACTGAAGACT--AACAGGCA------TCTCTCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170639 90 - 77216781 TAAATTTATGGTGACAAAATGAATCCATTCCTGGGCCCAAGACTATTCACCCACCAAATTCTGATTGAAGACT--AATAGGTAT----CTCTCTCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28080945 90 - 80997621 TAAATTTATGGTGACAAAATGAATCCATTCCTGGGCCCAAGACTATTCACCCACCAAATTCTGATTGAAGACT--AATAGGTAT----CTCTCTCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127347 88 + 10377808 TAAATTTATGGTGACAAAATGAATCCATGCCTGGTGCCAAGACTATTCACCCACCAAATTCTGATTGAACACT--AATAGGTA------TCTCTCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013796 88 - 8458610 TATATTTATGGTGACAAAATGAATCCATGCCTGGGCCCAAGACTATTCACCCACCAAATTCTGATTCAAGACT--AACAGGCA------TCTCTCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64961956 88 + 75148670 TCTACTTACTGTAACAAAGGGAATCCATGCCTGGGCCCAAGACTACTCACCCAACAAATTCTGACTCAAGACT--AACAGGCA------TCTCTCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219498 88 + 4244037 TCTACTTACCGTGACAAAAGGAATCCATGCCTGGACCCAAGACTATTCACCCACCAAATTCTAGCTCAAGACT--AACAGGCA------TCTCCCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218494 88 + 4569836 TATATTTACGGTGATAAAATGAATCCATGCCTGGGTCCAAGACTATTCACCCACCAAATTCTGATTCAAGACT--AACAGGCA------TCTCTCT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8751 86 - 12755 TATACTCACAGTGATGAATTGAATCCATGCTTGGGACCAAGACTGTTCACCCACCAA--TCTGATTCAATACT--AACAGGCA------TCTCTCT i calJac3.chr5_ACFV01180105_random C 0 I 2 s saiBol1.JH378271 1876035 88 + 3513951 TATATTCACAGTGATGAATTGAATCCATGCTTGGGACCAAGACTGTTTACCCACCAAAGTCTGATTCAATACT--AACAGGTA------TCTCTCT i saiBol1.JH378271 C 0 I 2 s cebCap1.NW_016107543v1 23702 88 - 4077172 TATGTTCACAACGATGAATTGAATCCATGCCTGGCCCCAAGCTTGTTCACCCACAAAAGTCTGATTCAAGAGT--AACAGGCA------TCTCTCT i cebCap1.NW_016107543v1 C 0 I 2 s aotNan1.NW_018505111v1 17546 88 - 94492 TATGTTCACAATGATGAATTGAATCCATGCCTGGCCCCAAGCCTATTCACCCACAAAAGTCTGATTCAAGAGT--AACAGGCA------TCTCTCT i aotNan1.NW_018505111v1 C 0 T 6184 s otoGar3.GL873537 22869315 88 + 28711273 TATGTGCAGATTGTTGAATTGAATCCATGCTTTGGTCCAAGTTTGTTCACCTGCAAAAGCCAGAGCCAACACT--AACAGGCA------TCTCTTC i otoGar3.GL873537 T 26666 I 2 s dasNov3.JH570468 594201 96 - 852752 TATGTTCCCAGTGAAAAATTGGATCCCTGCCTGCATTCAAGAATATTCATCCACAAAAGCCTGATTCAAGGCTGCAACAAGAATTTACCTTTCTCT i dasNov3.JH570468 C 0 C 0 a score=10000.000000 s hg38.chr17_JH159148v1_alt 57897 1 + 88070 G s panTro5.chr17 16368796 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274004 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120858 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110556 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170729 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081035 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127435 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013884 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962044 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219586 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218582 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8839 1 - 12755 G i calJac3.chr5_ACFV01180105_random I 2 C 0 s saiBol1.JH378271 1876125 1 + 3513951 G i saiBol1.JH378271 I 2 C 0 s cebCap1.NW_016107543v1 23792 1 - 4077172 C i cebCap1.NW_016107543v1 I 2 C 0 s otoGar3.GL873537 22869405 1 + 28711273 G i otoGar3.GL873537 I 2 C 0 s dasNov3.JH570468 594297 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17634 6184 - 94492 T a score=629410.000000 s hg38.chr17_JH159148v1_alt 57898 74 + 88070 -TGCAACCCACACCACC--TGTCTTTCAGTTCTTTGAACATCACTTGGGAAGAGGGTGTTTGTCACAGTGTGTTCCA s panTro5.chr17 16368797 76 + 83181570 -TGCCACCCACATCATCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGACGGTGACTGGCACAGTGTGTTCCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274005 74 + 83442489 -TGCAACCCTCACCACC--TGTCTTTCAGTTCTTTGAACGTCACTTGGGAAGAGGGTGTTTGTCACAGTGTGTTCCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120859 76 + 4267968 -TGCAATCCTCACCACCTGTGTCTTTCAGTTATTTGAACGTCACTTGGGAAGCGGGTGTTTGTCACAGTGTGTTCCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110557 76 - 2193130 -TGCCACCCACATCATCTGTGTCTTTCAGTTCTTTGAACGTCACTTGGGAAGACGGTGTCTGGCACAGTGTGTTCCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170730 76 - 77216781 -TGCAACCCTGACCACCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGAGAGTATCTGGCAGAGTGTGTTCCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081036 76 - 80997621 -TGCAACCCTGACCACCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGAGAGTATCTGGCAGAGTGTGTTCCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127436 76 + 10377808 -TGCAACCCTGACCACCTGTGTCTTTCAGTTCTTTGAATGTCACTTGGGAAGAGAGTATCTGGCAGAGTGTGTTCCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013885 76 - 8458610 -TGCAACCCACACCATCTGTGTCTTTCAGTTCTTTGAAGGTCACTTGGCAAGAGGGTGTCTGGCCGTGTGTGTTCCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962045 76 + 75148670 -TGCCACCCACACCACCTGTGTCTTTCAGTTCTTTGAACATCACTTGGGAAGAGGGTGTCTGGCAGAGTGTGTTCCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219587 76 + 4244037 -TGCGCCCCTCACCATCTGTGTCTTTCAGTTCTTTGAACATCACTTGGGAAGAGGGTGTCTGGCAGAGTGTGTTCCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218583 75 + 4569836 -TGCAACCCACACCACCTGTGTCTTTCAGTTATTTGCATGTCACTTGG-AAGAGGGTGTCTGGCAGAGTGTGTTCCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8840 75 - 12755 -TACAGCTTACTTTACCTGTTTCTTCCAGTTCTATGAAGC-CTCTTGGAAAGAGGGCGTTCAGCACAATGTGCTCCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876126 75 + 3513951 -TACAGCTTACTTTACCTGTTTCTTCCAGTTCTATGAAGC-CTCTTGGAAAGAGGGGGTTCAGCACAACGTGCTCTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 23793 74 - 4077172 -TCCACCCTACTCCACCTG--TCTTCCAGTTCTATCAAACTCACTTGGGAAAAGGGTGTTTGGCACAATGTATTCCA i cebCap1.NW_016107543v1 C 0 T 18120 s aotNan1.NW_018505111v1 11450 76 - 94492 -TGCAACCTATACCACCTGTGTCTTTCGGTTCTGTGAACGTCACTTGGGAAGAGGGTGCCTGGCACAGTGTGTTCCA i aotNan1.NW_018505111v1 T 6184 I 4 s otoGar3.GL873537 22869406 76 + 28711273 -TACAACCTACTGCAGGGGTGTTTCCCAGTTCTATCCATGACACCTGGGAAGAGGATGTTTTTTACAATCTATTCCA i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 594298 75 - 852752 TGGCAACTTACTCCATCAGTGAATGCCA-TTCTATGAAAGATATTTGGGTAGAAAATACTTGGCATA-CACCTTTCA i dasNov3.JH570468 C 0 C 0 a score=999207.000000 s hg38.chr17_JH159148v1_alt 57972 128 + 88070 TGTGGCAGAGCAGATCGAGAGCAGGTGG-----ATGCA--------GATAAATCCACTGGGATTTAGACAGCATCAAGTAATCTATGCCCT-GAGTGACCATTCATTCTGACTTGTCTGTGAGCGTGGCGA-TTCCAGAATGA s panTro5.chr17 16368873 130 + 83181570 TGTGGCAGAGCAGATCGAGAACAGGTGG-----ATGCA--------GAGAAATCCGCTGAGATTTAGACAGCATCAAGCAATGTATGCCCTAGGACGACCATTCATTCTGACTTGTCTGGGAGTGTGGGGATTTCCAGGATGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274079 128 + 83442489 TGTGGCAGAGCAGATCGAGAGCAGGTGG-----GTGCA--------GATTAATCCACTGGGATTTAGACAGCATCAAGTAATCTATGCCCT-GAGTGACCATTCATTCTGACTTGTCTGTGAGCGTGGCGA-TTCCAGGATGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4120935 128 + 4267968 TGTGGCAGAGCAGATCGAGAGCAGGTGG-----ATGCA--------GAGAAATCCACTGAGATTTAGACAGCATCAAGTAATCTATGCCCT-GAGTGACCATTCATTCTGACTTGTCTGTGAGCGTGGCGA-TTCCAGGATGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110633 130 - 2193130 TGCGGCAGAGCAGATAGAGAACAGGTGG-----ATGCA--------GAGAAATCCACTGGGATTTAGACAGCATCAAGCAATCTATGCCCTAGGGCGACCATTCATTCTGACTTGTCTGGGAGTGTGGGGATTTCCAGGATGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170806 130 - 77216781 TGTGGCAGAGCAGATTGAGAGCAAGTGG-----ATGCA--------GAGAATTCCACTGGGATTTAGAGAGCATAAAGCAATGTATGCCCTGGGGCGACCAGTCATTCTGACTTACCTGTGAGTGTGGTGATTACCAGGATGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081112 130 - 80997621 TGTGGCAGAGCAGATTGAGAGCAAGTGG-----ATGCA--------GAGAATTCCACTGGGATTTAGAGAGCATAAAGCAATGTATGCCCTGGGGCGACCAGTCATTCTGACTTACCTGTGAGTGTGGTGATTACCAGGATGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127512 130 + 10377808 TGTGGCAGAGCAGATTGAGAGCAAGTGG-----ATGCA--------GAGAATTCCACTGGGATTTAGAGAGCATAAAGCAATGTATGCCCTGGGGCGACCAGTCATTCTGACTTACCTGTGAGTGTGGGGATTACCAGGATGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2013961 129 - 8458610 TGTGGCAGAGCAGATTGAGAGCAGGTGG-----ATGCA--------GAGAAATTCACTGGGATTTAGACAGCATCAAGCAATCTATGCCCT-GAGTGACCAGTCATTCTGACTTGTCTGCGAGTGTGGCGATTACCAGAACAA i cerAty1.NW_012006043v1 C 0 I 1403 s chlSab2.chr16 64962121 130 + 75148670 TGTGGCGGAGCAGATTGAGAGCAGGTGG-----ATGCA--------GAGAAATCTACTGGGATTTTGACAGCATTGAGCAATCTATGCCTGAGCGTGACTATTCATTCTGACTTGCCTGTGAGTGTGGTGATTACCGGGATGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219663 130 + 4244037 TGTGGCAGAGCAGATCGAGAGCAAGTGG-----ATGCA--------GGGAAATCCACTGGGATTTTGACAGCGTCGAGCAATCTAAGCCTGTGCGTGACTATTCATTCTGACTTGTCTGTGAGTGTGGCGATTACCGGGATGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218658 129 + 4569836 TGTGGCAGAGCAGATGGAGAGCAGGTGG-----ATGCA--------GAGAAATCCACTGGGATTTAGACAGCATCACGCAATCTATGCCCT-GAGTGACCAGTCATTCTGACTTGTCTGCAAGTGTGGCGATTACCAGGACGA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 8915 135 - 12755 GGTGGCAGAGTGGAACCCAAGCTGACAGGTAGAAAGAG--------GAGGAGTTCACTGGAATTCACGAAGCCTCAAGCAATCCACATGCTGgggtgagcattcatcctgatttgtctgggactgaggggcttaccagcatgt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876201 135 + 3513951 GGAGGCAGTGTGGAACCAAAGCAGACAGGTAGAAAGAG--------GAGGAGTTCACTGGAATTCACAAAGCCTCAAGCAATCTACATGCtggggtgagcattcatcctgatttgcctgggtctgaggggcttaccagCAAGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5747 132 - 4077172 TGTGGCAGAGCAGAATTGAAGTAGGTGG---GAACAAG--------GAGAAGTCCACTGGGATTTAGATAGCATCAAGCACTCTTTGTCCTGgggtgaccattcattctgatttgtctgggagtgaggggcttaccaggaata i cebCap1.NW_016107543v1 T 18120 C 0 s aotNan1.NW_018505111v1 11530 132 - 94492 TGTGGCAGAGCCGATCGAGCATAGGTGG---ATGCAAA--------GAGAAATCCACTGGGATTTTGGCAGCATCAAGCAATCTATGCCCCGGGGTGACCATTCATTCTGATTTGTCTGCGAGTGTGGCGATTACCAGAATGA i aotNan1.NW_018505111v1 I 4 C 0 s otoGar3.GL873537 22869482 113 + 28711273 TGTGGTAAAGCAGAAAGAAAGCATATGG-----ACAGA--------AGGATA---AGTAGCATACTGGGAGTAACAAGGGTTCAGTGTGa--gggtgac--atcatcttgattagcctg----------gcttacaaagatga i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 594373 131 - 852752 TATGGCAAAGCAGAAGCAAAGCAGGTGG-----ATAGAAGAAGAAGAATAATTATACCAGAATTCAGAAAGTATCGATCAATTTACAACCTGATgtgacaaatcatcccagtttgccca-aagctgggggtttccct------ i dasNov3.JH570468 C 0 C 0 a score=414491.000000 s hg38.chr17_JH159148v1_alt 58100 53 + 88070 GAATGTA------GGACTCTCTATGGCATAAATGCTTGAGATTCAGGCCAACCAG-CATG s panTro5.chr17 16369003 53 + 83181570 GAATGGA------GGACTTTCTATCACGTAACTGCTTGAGATTCAGGCCAACCAG-CATG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274207 53 + 83442489 GAATGTA------GGACTCTCTATGGCATAACTGCTTGAGATTCAGGCCAACCAG-CATG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121063 53 + 4267968 GAATGTA------GGACTCTCTATGACATAACTGCTTGAGATTCAGACCAACCAG-CACG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110763 53 - 2193130 GAATGGA------GGACTTTCTATCACATAACTGCTTGAGATTCAGGCCAACCAG-CATG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170936 53 - 77216781 GAATGTA------GGACTTTCTATCACATAACTGGTTGAGATTCAGACCAACCAG-CATG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081242 53 - 80997621 GAATGTA------GGACTTTCTATCACATAACTGGTTGAGATTCAGACCAACCAG-CATG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127642 53 + 10377808 GAATGTA------GGACTTTCTATCACATAACTGGTTGAGATTCAGACCAACCAG-CATG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015493 53 - 8458610 gaaTGTA------GGACTTTCTATGACATAACTGATTGAGATTCAGGCCAACCAG-CATG i cerAty1.NW_012006043v1 I 1403 C 0 s chlSab2.chr16 64962251 53 + 75148670 TAATGGA------GGACTTTGTATCACATAACTGGTTGAAATTCAGGCCAACGAG-TATG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219793 53 + 4244037 TAATGGA------GGACTTTCTATCACATAACTGCTTGAGATTCAGGGCAACGAG-TATG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218787 53 + 4569836 GAATGTA------GGACTTTCTATGACATAACTGACTGAGATTCAGGCCAACCAG-CATA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9050 59 - 12755 gAATGTGAGAGTGGGAATTACTGTGACATAACTGCTCTAGGTCTAGGAAAAGCAG-TCTG i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876336 31 + 3513951 AAATGTAAGAGTGGGAGTTACTGTGACATAA----------------------------- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 5879 53 - 4077172 gaatgta------ggactttcTCTGACATAACTGCTTTAGATTCAGACCAACCAG-CATG i cebCap1.NW_016107543v1 C 0 I 11954 s aotNan1.NW_018505111v1 11662 53 - 94492 GAATGTA------GCACCTTCTATGACATAACTGCTTTAGATTCAGGTCAACCAG-CATG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22869595 53 + 28711273 gaaagtg------ggagcttctgtgatatgactgccatagatccaggcaaaccag-gatg i otoGar3.GL873537 C 0 I 7 s dasNov3.JH570468 594504 52 - 852752 ggatgtg------ggattttcagtgttaaaactaggacagtctctgtcaaattggaca-- i dasNov3.JH570468 C 0 C 0 a score=127229.000000 s hg38.chr17_JH159148v1_alt 58153 23 + 88070 TGCTGTG-GCTCTAGTCGC-AACCC s panTro5.chr17 16369056 24 + 83181570 TGCTCTG-GCTCTAGCCCTAAACCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274260 23 + 83442489 TGCTTTG-GCTCTAGCCGC-AACCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121116 23 + 4267968 TGCTCTG-GCTCTAGCCGC-AACGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110816 24 - 2193130 TGCTGTG-GCTCTAGCCCTAAACCT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30170989 24 - 77216781 TGCTGTG-GCTCTAGCCTTAAACCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081295 24 - 80997621 TGCTGTG-GCTCTAGCCTTAAACCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127695 24 + 10377808 TGCTGTG-GCTCTAGCCTTAAACCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015546 23 - 8458610 CACTCTG-GCTCTAG-CTGCAACCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962304 24 + 75148670 AGCTGTG-CTTCTAGCCTTAAACCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219846 24 + 4244037 AGCTGTG-CTTCTAGCCTTAAAACT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218840 23 + 4569836 CGCTCTG-GCTCTAG-CCACAACCC i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9109 23 - 12755 AGCTGTG-GCTCTAGTCCT-AACCC i calJac3.chr5_ACFV01180105_random C 0 I 1 s saiBol1.JH378271 1876367 21 + 3513951 --CTTTG-GCTCTAGCCCT-AACCC i saiBol1.JH378271 C 0 I 1 s cebCap1.NW_016107543v1 17886 23 - 4077172 AGCTGTG-GTTCTAGCCCT-AACCC i cebCap1.NW_016107543v1 I 11954 I 1 s aotNan1.NW_018505111v1 11715 23 - 94492 AGCCGTG-GTTCTAGCCCT-AACCC i aotNan1.NW_018505111v1 C 0 I 51 s otoGar3.GL873537 22869655 17 + 28711273 gacTTGT-GTTCTATCCC------- i otoGar3.GL873537 I 7 I 18 s dasNov3.JH570468 594556 24 - 852752 agttgaacactccaGTCTT-AACCC i dasNov3.JH570468 C 0 I 1 a score=92859.000000 s hg38.chr17_JH159148v1_alt 58176 11 + 88070 GGTTACT---AGCA s panTro5.chr17 16369080 11 + 83181570 AGTTACT---AGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274283 11 + 83442489 GGTTACT---AGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121139 11 + 4267968 AGTTACT---AGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110840 11 - 2193130 AGTTACT---AGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171013 11 - 77216781 AGTTACT---AGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081319 11 - 80997621 AGTTACT---AGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127719 11 + 10377808 AGTTACT---AGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015569 11 - 8458610 GGTTACT---AGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962328 11 + 75148670 AGTGACT---AGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219870 11 + 4244037 AGTGACT---AGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218863 11 + 4569836 GGTTACT---AGCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9133 11 - 12755 GGTTATT---GACA i calJac3.chr5_ACFV01180105_random I 1 C 0 s saiBol1.JH378271 1876389 11 + 3513951 GGCTACT---GGGA i saiBol1.JH378271 I 1 C 0 s cebCap1.NW_016107543v1 17910 11 - 4077172 GGTTACT---GGCA i cebCap1.NW_016107543v1 I 1 C 0 s otoGar3.GL873537 22869690 14 + 28711273 AGTTACTTAGGTCA i otoGar3.GL873537 I 18 C 0 s dasNov3.JH570468 594581 11 - 852752 GTTTACT---TGCA i dasNov3.JH570468 I 1 I 31613 e aotNan1.NW_018505111v1 11738 51 - 94492 I a score=25714.000000 s hg38.chr17_JH159148v1_alt 58187 7 + 88070 C--------AGTAAG------ s panTro5.chr17 16369091 15 + 83181570 GTAACTAGAAGTAAG------ i panTro5.chr17 C 0 I 96 s panPan2.chr17 16274294 7 + 83442489 C--------AGTAAG------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121150 7 + 4267968 C--------AGTAAG------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110851 7 - 2193130 C--------AGTAAG------ i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171024 7 - 77216781 C--------AGTAAG------ i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081330 7 - 80997621 C--------AGTAAG------ i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127730 7 + 10377808 C--------AGTAAG------ i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015580 7 - 8458610 C--------AGTAAG------ i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962339 7 + 75148670 A--------AGTAAG------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219881 7 + 4244037 A--------AGTAAG------ i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218874 7 + 4569836 C--------AATAAG------ i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9144 7 - 12755 T--------AGTTAT------ i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876400 7 + 3513951 C--------GGTCAT------ i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17921 7 - 4077172 T--------AGGAAG------ i cebCap1.NW_016107543v1 C 0 C 0 s otoGar3.GL873537 22869704 7 + 28711273 C--------GGACGG------ i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 626205 13 - 852752 C--------AGTAACCTCAAG i dasNov3.JH570468 I 31613 C 0 e aotNan1.NW_018505111v1 11738 51 - 94492 I a score=1918.000000 s hg38.chr17_JH159148v1_alt 58194 22 + 88070 CAGCA-----------------------------TGtcttctctctctctc------ s panPan2.chr17 16274301 20 + 83442489 CAGCA-----------------------------TGTCT--TCTCTCTCTC------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121157 22 + 4267968 CAGCA-----------------------------TGTCTTCTCTCTCTCCC------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110858 10 - 2193130 ----------------------------------TGTCATTTCT------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171031 18 - 77216781 CGTCA-----------------------------TTTCTTCTCTCCA---------- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081337 18 - 80997621 CGTCA-----------------------------TTTCTTCTCTCCA---------- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127737 18 + 10377808 CGTCA-----------------------------TTTCTTCTCTCCA---------- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015587 18 - 8458610 CGTTA-----------------------------TGTCTTCTCTCTT---------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962346 18 + 75148670 CATCT-----------------------------TTTCTTCTCTCTA---------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219888 18 + 4244037 CATCA-----------------------------TTTCTTCTCTCTA---------- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218881 18 + 4569836 CGTTA-----------------------------TGTCTTCTCTCTC---------- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9151 47 - 12755 TGGCACctctctcttgatctctctctctctctcgctctctctctctc---------- i calJac3.chr5_ACFV01180105_random C 0 I 4 s saiBol1.JH378271 1876407 5 + 3513951 TGGCA---------------------------------------------------- i saiBol1.JH378271 C 0 I 4 s cebCap1.NW_016107543v1 17928 18 - 4077172 TGTTA-----------------------------TTTCTTCTCTCTC---------- i cebCap1.NW_016107543v1 C 0 I 4 s otoGar3.GL873537 22869711 22 + 28711273 -------------------------AGCCTTTTTTTCCTTCTCTGTC---------- i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 626218 24 - 852752 GGACA-----------------------------TACCTTCACCCAA----ACCTGC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 11738 51 - 94492 I e panTro5.chr17 16369106 96 + 83181570 I a score=-2242.000000 s hg38.chr17_JH159148v1_alt 58216 1 + 88070 -t s panTro5.chr17 16369202 1 + 83181570 -T i panTro5.chr17 I 96 C 0 s panPan2.chr17 16274321 1 + 83442489 -T i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121179 1 + 4267968 -T i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110868 1 - 2193130 -T i nomLeu3.chrUn_GL397460_1 C 0 C 0 s chlSab2.chr16 64962364 1 + 75148670 -C i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219906 1 + 4244037 -C i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9202 1 - 12755 -t i calJac3.chr5_ACFV01180105_random I 4 C 0 s saiBol1.JH378271 1876416 1 + 3513951 -T i saiBol1.JH378271 I 4 C 0 s cebCap1.NW_016107543v1 17950 1 - 4077172 -T i cebCap1.NW_016107543v1 I 4 C 0 s otoGar3.GL873537 22869733 1 + 28711273 -T i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 626242 1 - 852752 A- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 11738 51 - 94492 I e colAng1.NW_012122154v1 2218899 0 + 4569836 C e cerAty1.NW_012006043v1 2015605 0 - 8458610 C e macNem1.NW_012014910v1 2127755 0 + 10377808 C e macFas5.chr16 28081355 0 - 80997621 C e rheMac8.chr16 30171049 0 - 77216781 C a score=3994.000000 s hg38.chr17_JH159148v1_alt 58217 2 + 88070 ct s panTro5.chr17 16369203 2 + 83181570 CT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274322 2 + 83442489 CT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121180 2 + 4267968 CT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110869 2 - 2193130 CT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s chlSab2.chr16 64962365 2 + 75148670 AT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219907 2 + 4244037 AT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218899 1 + 4569836 -G i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9203 2 - 12755 ct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876417 2 + 3513951 CT i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22869734 2 + 28711273 TT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 626243 2 - 852752 CT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 11738 51 - 94492 I e cebCap1.NW_016107543v1 17951 0 - 4077172 C e cerAty1.NW_012006043v1 2015605 0 - 8458610 C e macNem1.NW_012014910v1 2127755 0 + 10377808 C e macFas5.chr16 28081355 0 - 80997621 C e rheMac8.chr16 30171049 0 - 77216781 C a score=59433.000000 s hg38.chr17_JH159148v1_alt 58219 11 + 88070 atttctTTTTA s panTro5.chr17 16369205 11 + 83181570 ATTTCTTTTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274324 11 + 83442489 ATTTCTTTTTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121182 11 + 4267968 GTTTCTTTTTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110871 11 - 2193130 ATTTCTTTTCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171049 8 - 77216781 ---TTTTTTAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081355 8 - 80997621 ---TTTTTTAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127755 8 + 10377808 ---TTTTTTAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015605 8 - 8458610 ---TCTTTTTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962367 11 + 75148670 ATTTCTTTTTA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219909 11 + 4244037 ATTTCTTTTTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218900 11 + 4569836 CTTTCTTTTTA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9205 11 - 12755 ctctGTTTTCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876419 11 + 3513951 CTCTGTTTTCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17951 11 - 4077172 ATTTCCTTTGA i cebCap1.NW_016107543v1 C 0 C 0 s otoGar3.GL873537 22869736 11 + 28711273 CTTACTTTTTA i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 626245 10 - 852752 GTTTTTTCTT- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 11738 51 - 94492 I a score=15764.000000 s hg38.chr17_JH159148v1_alt 58230 2 + 88070 AT s panTro5.chr17 16369216 2 + 83181570 AT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274335 2 + 83442489 AT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121193 2 + 4267968 AT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110882 2 - 2193130 AT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171057 2 - 77216781 AA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081363 2 - 80997621 AA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127763 2 + 10377808 AA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015613 2 - 8458610 AT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962378 2 + 75148670 AT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2219920 2 + 4244037 AT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218911 2 + 4569836 AT i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9216 2 - 12755 AT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876430 2 + 3513951 AT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17962 2 - 4077172 AT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11789 2 - 94492 AT i aotNan1.NW_018505111v1 I 51 C 0 s otoGar3.GL873537 22869747 2 + 28711273 AT i otoGar3.GL873537 C 0 T 8014 e dasNov3.JH570468 626255 0 - 852752 C a score=1423972.000000 s hg38.chr17_JH159148v1_alt 58232 158 + 88070 GAAGGAATTAGATGAGTTGAGATGATGCCTGATTCATCATGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGCAAATT-ATTAATTTTCAACTTGATATAGTATTATATTGTAAATACATCTGTGTCCCCATTA-C s panTro5.chr17 16369218 157 + 83181570 GAAGGGATTAGATGAGTTGAGATGATACCTGATTCATCGTGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTATATCATTCACTTGAGAAGAA-TGCAAATT-ATTAATTTCCAACCTGATATAGTATTACATTGTAAATACATCTATGTCCCCATTA-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274337 158 + 83442489 GAAGGAATTAGATGAGTTGAGATGATGCCTGATTCATCATGGAGGTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGCAAATT-ATTAATTTTCAACTTGATATAGTATTATATTGTAAATACATCTATGTCCCCATTA-C i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121195 156 + 4267968 GAAGGAATTAGATGAGTTGAGATGATGCCTGATTCATCATGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAA-AA-TGCAAACT-ATTAATTTTCAACTTGATATAGTATTATATTGTAAATACATCTATGT-CCCATTA-C i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2110884 157 - 2193130 GAAGGGATTAGATGAGTTGAGATGATACCTGATTCATCGTGGAGTTCTAACACGTTTAAAACATTTTCTA---GGTATCTCATTCATTTGAGAAGAA-TGCAAATT-ATTAATTTCCAACCTGATATAGTATTACATTGTAAATACATCTATGTCCCCATTA-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171059 157 - 77216781 TGAAGAATTAGATGAGTTGAGATGATACCTGATTCATCATGGAGTTCTAATATGTTTAAACGATTTTCTA---GGTATACCATTCATTTGAGAAAAA-TGCAAATT-ATTAATTTCCAACTTGATATAATATTATATTGTAAATACATCTATGTCCCCATTA-- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081365 157 - 80997621 TGAAGAATTAGATGAGTTGAGATGATACCTGATTCATCATGGAGTTCTAATATGTTTAAACCATTTTCTA---GGTATACCATTCATTTGAGAAAAA-TGCAAATT-ATTAATTTCCAACTTGATATAATATTATATTGTAAATACATCTATGTCCCCATTA-- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127765 157 + 10377808 TGAAGAATTAGATTAGTTGAGATGATACCTGATTCATCATGGAGTTCTAATATGTTTAAACCATTTTCTA---GGTATACCATTCATTTGAGAAAAA-TGCAAATT-ATTAATTTCCAACTTGATATAATATTATATTGTAAATACATCTATGTCCCCATTA-- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015615 157 - 8458610 GAAGGAATTAGATGAGTTGATATGACGCCTGGTTCATCGTGGAATTCTAACATGTTTAGAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGTAAAGT-ATTAATTTCCAGCTTGATATCGTATTATTTTGTAAATACATCTATGGCTCCATTA-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962380 158 + 75148670 GAAGCAATTAGATGAGCTGAGATGATACCTGATTCATCGTGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGCAAGGT-ATTAATTTCCAACTTGATATAGTATTATATTGTAAATATATTTAAGGCCCCATTAC- i chlSab2.chr16 C 0 I 4 s manLeu1.NW_012106252v1 2219922 157 + 4244037 GAAGGAATTAGATGAGCTGAGATGATACCTGATTCATCGGGGAGTTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGCAAAGT-ATTAATTTCCAAATTGATATAGTATTATATTGTAAATATATTTATGGCCCCATTA-- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2218913 157 + 4569836 GAAGGAATTAGATGAGTTGATATGACCCCTGGTTCATCGTGGAATTCTAACATGTTTAAAACATTTTCTA---GGTATACCATTCATTTGAGAAGAA-TGTAAAGT-ATTAATTTCCAGCTTGATATAGTATTATCTTGTAAATACCTCTATGGCTCCATTA-- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9218 156 - 12755 GAGGAAATTAGATGAGTTCAGGTGATAGCTGATTTCTCTTTGAGGTCTTCCATGTTTAAAAC-TTTTTAA---GTTATACCATTTGTTTCAGAAGAA-TGCAAATT-ATTAATTAGTATCTTGATATAATATTATATTGTAAATACAGCTAGGTCTCCATTA-- i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876432 153 + 3513951 GAGGAGATTAGATGAGTTCAGATGATACCTGATTTCTCTTTGAGGTCTTCCATGTTTAAAAC-TTTTTAA---GTTATACCATTTGTTTCAGAAGAA-TGCAAATT-ATTAATTCATATCTTCAT---ATATTATATTGTAAATACATCTAGGTCTCCATTA-- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 17964 157 - 4077172 GAAGGAATTAGATGAGTTGAGATGATACCTGATTCATCTTGGAGTTCTGACATGTTTAAAACATTTTTTA---GGTATACCATTCATTTCCGAAGAA-TGCAAATT-ATTAATTTCTAACTTGATATAACATTATGTTGTAAACACACCTATGTCCCCATTA-- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11791 157 - 94492 GAAGCAATTAGATGAGTTGAGATGATACCTGATTCATCTTGGAGTTCTGACATGTTTAAAACATTTTTTA---GGTATACCATTCATTTCAGAAGAA-TGCAAATT-ATTAATTTCTAACTTGATCTAACATAATGGTGTAAACACACCTATGTCCCCATTA-- i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861735 157 + 28711273 GAGGGAATTAGATTAGTTGCAGTGATACCTGATTTGCCTTTGTGATCTAACATATT---AACATTTTGGGGGTGGTATACCACTTTTTAAAAAAGAAGCGCAAATTAACTAATTTCCAGCTATAGAGAATATCACAAAGTGAATACATCCCTGTCACTAT---- i otoGar3.GL873537 T 8014 C 0 s dasNov3.JH570468 626255 97 - 852752 -AAGGAATTAGATTAG---ATCTTATACCTGATGTTTCTTTGAAGTCTAACATATTTTAAAC-------T---AATattc------------------tcccaaag-at--------------------------------aacatacccatgtcactgtta-- i dasNov3.JH570468 C 0 C 0 a score=31556.000000 s hg38.chr17_JH159148v1_alt 58390 7 + 88070 ATCTATG s panTro5.chr17 16369375 5 + 83181570 --CCAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274495 7 + 83442489 ATCTATG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121351 7 + 4267968 ATCTATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111041 5 - 2193130 --CCAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171216 5 - 77216781 --CCAGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081522 5 - 80997621 --CCAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127922 5 + 10377808 --CCAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015772 5 - 8458610 --CTAGG i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2220079 5 + 4244037 --CCAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219070 5 + 4569836 --CTAGG i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9374 5 - 12755 --CCAGT i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876585 5 + 3513951 --CCAGT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 18121 5 - 4077172 --CGAGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11948 5 - 94492 --CGAGG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861892 7 + 28711273 AACCAAG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 626352 5 - 852752 --tcagg i dasNov3.JH570468 C 0 C 0 e chlSab2.chr16 64962538 4 + 75148670 I a score=1219120.000000 s hg38.chr17_JH159148v1_alt 58397 133 + 88070 TTAGGAAATAGAAATTAATTCCATTCTCTCCCAATTATATGCTCTTACTCATTCCCAAAGACAGCTAATCACTCTATC-AGTTGTAATCCTGTAGGTAATTTTTG-GT--TTTTTA--AAGTTTTCATGTGAATAAAAA s panTro5.chr17 16369380 131 + 83181570 TTAGGAAATAGAAATTAATGCCATTCTCTCCCAATTATATCCGCTTACTCATTTCCAA--ACAGCTAATCACTCTATCAAGTTATAATCCAGTAGATGA-CTTTG-GC--TTTTTA--AATTTTTCACGTGAATAAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274502 133 + 83442489 TTAGGAAATAGAAATTAATTCCATTCTCTCCCAATTATATGCTCTTACTCATTCCCAAAGGCAGCTAATCACTCTATC-AGTTGTAATCCTGTAGGTAACTTTTG-GT--TTTTTA--AAGTTTTCATGTGAATAAAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121358 133 + 4267968 TTAGGAAATAGAAATTAATTCCATTCTCTCCCAATTATATGCTCTTACTCTTTCCCAAAGACAGCTAATCACTCTATC-AGTTGTAATCCTGTAGGTAACTTTTG-GC--TTTTTA--AAGTTTTCATGTGAATAAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111046 132 - 2193130 TTAGGAAATAGAAATTAATCCCATTCTCTCCCAGTTATATCCGCTTACTCATTTCCAA--ACAGCTAATCACTCTATCAAGTTATAATCCAGTAGGTGACTTTTG-GC--TTTTTA--AAATTTTCACGTGAATAAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171221 134 - 77216781 TTAGGAAATAGAAATTAATCCCATTCTCTCCCAATTATATCCTCTTACTCTTTCTCAAGGACAACTAATCACTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG-GC--TTTTTA--AAGTTTTCATGTGAATAAAAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081527 134 - 80997621 TTAGGAAATAGAAATTAATCCCATTCTCTCCCAATTATATCCTCTTACTCTTTCTCAAGGACAACTAATCACTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG-GC--TTTTTA--AAGTTTTCATGTGAATAAAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2127927 134 + 10377808 TTAGGAAATAGAAATTAATCCCATTCTCTCCTAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCTCTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG-GC--TTTTTA--AAGTCTTCATGTGAGTAAAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015777 134 - 8458610 TTAGGAAATAGAAATTAATCCTATTCTTTCCTGATTATATCCTCTTATTCATTCCCAAAGACAACTAATCACTCTATCAAGTTGTAATCCAGTAGGTAAGTTTTG-GC--TTTTTA--AAGTTTTCATGTGAATAAAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962542 134 + 75148670 TTAGGAAATAGAAATTAATCCCATTCTCTCCTAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCACTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG-GC--TTTTTA--AAGTTTTCATGTGAGTAAAAA i chlSab2.chr16 I 4 C 0 s manLeu1.NW_012106252v1 2220084 134 + 4244037 TTTGGGAAGAGAAATTAATCCCATTCTCTCCTAATTATATCCTCTTACTCATTCCCAAAGACAGCTAATCTCTCTATCAAGTTGTAATCCAGTAGGTAACTTTTG-GC--TTTTTA--AAATTTTCATGTGAGTAAAAA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219075 134 + 4569836 TTAGGAAACAGAAATTAATCCCATTCTTTCCCAATTATATCCTCTTATTCATTCCCAAAGACAGCTAATCACTCTATCAGGTTGTAATCCAGTAGGTAAGTTTTG-GC--TTTTTA--AAGTTTTCATGTGAATAAAAA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9379 134 - 12755 TTACAAAATAGAAATCAATTCAGTTCCCTCCAA--TATATCTTCTTATTTGTCTTCAAAGGTAGCTAGTCACTCTATTAAGTTATAATCCTGAAGGTCAGTTTTG-GC--TTTTTCTTTGACTTGTATGTAAATAAAAA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876590 128 + 3513951 TTACAAAATAGAAATTAATTCAATTCCCTCCAA--TATATTTTCTCATTTGTCTTCAAAGGTAGCTAGTCACTCTATCAAGTTATAATCCTGAAGGTCAGTTTTG-GC--TTTTTCTTTGACTTGTATGT------AAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 18126 134 - 4077172 TTAGGTAATAGAAATTAATTCCCTTCTCTCCCAATTATATTCTCTTACTCATTCCCAAAAACAGCTAATCACTCTGGCAAGTTGTAATCCATTAGGTAAATTTTA-GC--TTTTTA--AAATTTTCATGTGAATAAAAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 11953 134 - 94492 TTAGGAAATAGAAATTAATCCCCTTCTCTCCCAATTATATTCTCTTACTCATTCCCAAAAACAGCTAATCACTCTATCAAGTTGTAATCCATTAGGTAAATTTTA-GC--TTTTTA--AAATTTTCATGTGAATAAAAA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22861899 133 + 28711273 TTAGG--ATGTAAATTAATTCCCCTCCTTCCAAATTACATCCTCTTACTCATCCCAATAGGTCCCTAATCTCTCTATTGATTTGTAACACTGTAGATACATTTTGAGG--TGTTTT--TGACATTTACGTAAAAGAAAA i otoGar3.GL873537 C 0 I 5356 s dasNov3.JH570468 626357 126 - 852752 ttaaaaagcagaatttaatcctactgccttcaaattatactaccaccctcactcccaa-----gataatcactgtgct-gatcgcaaacta-caaatatgttatg-acagtttttg--acagttttaaatgaaata--- i dasNov3.JH570468 C 0 C 0 a score=729840.000000 s hg38.chr17_JH159148v1_alt 58530 91 + 88070 GTATAGTATTTGCTTCTCTATTTCTTTGGCATAAA--CAAAAGTAATCTTTATCGCCTAGTCATTTTGGACTCTTCATATAAGCAAAGCAGCA s panTro5.chr17 16369511 91 + 83181570 TTATAGTATTTGCTTCTCTATTTCTTTGTTATAAT--CAAAAGGAATCGTTATcacctagtcattttggactcttcccgtcagcagagcagca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274635 91 + 83442489 GTATAGTATTTGCTTCTCTATTTCTTTGGCAGAAA--CAAAAGTAATCTTtatcgcctagtcattttggactcttcatataagcaaagcagca i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121491 91 + 4267968 GTATAGTATTTGCTTCTCTATTTCTTTGGCATAAA--CAAAAGTAATCTTTATcgcctagtcattttggactcttcatataagcaaagcagca i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111178 91 - 2193130 TTATAGTATTTGCTTCTCTATTTCTTTGTTATAAT--CAAAAGGAATCGTtatcgcttagtcattttggactcttcctgtcagcagagcagca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171355 91 - 77216781 GTATAGTATTTGCTTCTCTATTTGTTTGTCATAAT--CAAAAGGAATCAGtatcacctagtcattttggactcttcctgtcagcagagcagca i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081661 91 - 80997621 GTATAGTATTTGCTTCTCTATTTGTTTGTCATAAT--CAAAAGGAATCAGTATCacctagtcattttggactcttcctgtcagcagagcagca i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128061 91 + 10377808 GTGTAGTATTTACTTCTCTATTTCTTTGTCATAAA--CAAAAGTAATCCTTATcacctagtaattttggcctcttcctgtcagcagagcagca i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2015911 91 - 8458610 TTATAGTATTTGCTTCTCTCTTTATTTGGCATAAA--CAAAAGTAATATTTATCGCCGAGTCATTTTGGACTCCTCATACAAGCAAAGCAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962676 91 + 75148670 GTGTAGTATTTACTTCTCTATTTCTTTGTCATAAA--GAAAAGTAATCCTTGTCACCTAGTTATTTTGGCTTCTTCCTGTCAGCAGAGCAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220218 91 + 4244037 GTGTAGTATTTACTTCTCTATTTCTTTGTCATAAA--CAAAAGTAATCCTTATCACCTAGTAATTTTGACCTCTTCCTGTCAGCAGAGCAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219209 91 + 4569836 TTATAGTATTTGCTTCTCTATTTATTTGGCATAAA--CAAAAGTAATCTTTATCacctagtcattttggactcttcatacaagcaaggcagca i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9513 90 - 12755 TCATAGAATTTGCTTCATTGTGTTTTTGGCATaat--tgaaagcagcaattataacctggtca-tttggacccttcatgtcagcacagcagca i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876718 90 + 3513951 TTATAGAATTTGCTTCATTGTGTTTTTGGCGTAAT--CAAaagcagcaattataacctggtca-tttggacccttcatgtcagaacagcagca i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 18260 91 - 4077172 TTATGGTATTTGCTTCTCTACTTCTTTGGCATAAT--CAAAAGTAATCgttattgcttagtcattttggactcttcatgtcagcagaccagca i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 12087 90 - 94492 TTATGGTATTTGCTTCTCTATTTCTTAGGCATAAT--CAAAA-TAATTGTTATTGcttagtcattttggactcttcatgtcagcagaccagca i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 626483 91 - 852752 atatagaattggcttctttctcactgcattatcattctgaaatttgtcttcata--ctcatcataatttactcatcattctagctgtgtagta i dasNov3.JH570468 C 0 I 3664 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=956994.000000 s hg38.chr17_JH159148v1_alt 58621 116 + 88070 GAC-AGAGAAAGTAGTTACTATTTGGTGAGGGATAATTACCCTCAAGCCATATAGTGTA-GCAGAATATATCTATAGCTCAGGAGATTTACTGAGtatattaatttactagcactgcc s panTro5.chr17 16369602 116 + 83181570 gac-agaggaaggagttactatttggtgaggggtaattATCTTTAAGCCATATAGTGTA-GCAGAATATATCTATAGCTCAGGATACTTAGTAAGtatattaacttaccagcactgcc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274726 116 + 83442489 gac-agagaaagtagttactatttggtgagggataattACCCTCAAGCCATATAGTGTA-GCAGAATATATCTATAGCTCAGGAGATTTACTGAGtgtattaatttactagcactgcc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121582 116 + 4267968 gac-agagaaagtagttactatttggtgagggataattaccctcaagccatatagtgta-gcagaatatatctatagctcaggagatttactgagtatattaatttactagcactgcc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111269 116 - 2193130 gac-agagaaaggagttactatttggtgaggggtaattatctttaagctataaagTGTA-GCAGAATATATCTATAGCTCAGGATACTTAGTAAGtatattaacttactagcactgcc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171446 116 - 77216781 gac-agagaaaggagttactatttggtgaggggtaattatcctTAAGCCATATAGTATA-GCAGAATGTATTTATAGCTCAGGATACTTAGTAAGtatattaacttactagcactgcc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081752 116 - 80997621 gac-agagaaaggagttactatttggtgaggggtaattatccttaaGCCATATAGTATA-GCAGAATGTATTTATAGCTCAGGATACTTAGTAAGtatattaacttactagcactgcc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128152 116 + 10377808 gac-agagaaaggagttactatttggtgaggggtaattatcctTAAGCCATATAGTATA-GCAGAATGTATTTATAGCTCAGGATACTTAGTAAGtatattaacttactagcactgcc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016002 116 - 8458610 GAG-AGAGAAAGGAGTTACTATTTGGCGAGGGATAATTACCCTCAAGCCATATAGTTTA-GCAAAATATATCAATAGCTCAGGAGGTTTACTGAAtatattaatttactagcactgcc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962767 117 + 75148670 GACAAGAGAAAGGAGTTACTATTTGATGACGGGTAATTATCCTCAAGCCATATAGTGTA-GGAGAATGTATCTATACCTCAGAAGATTTACTTAGtatattgatttactaacactgcc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220309 117 + 4244037 GACAAGGGAAAGGAGTTACTATTTGATGTTGGGTAATTATCCTCAAGCCATACAGTGTA-GGAGAATATATCTATACCTCAGAAGATTTACTTAGtatattgatttactagcactgct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219300 116 + 4569836 gag-agagaaaggagttactatttggtgagggataattaccctcaagccatatagtgta-gcaaaatatatctatagctcaggagatttactgagtatattaatttactagcactgcc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9603 115 - 12755 gat-agataaaggagttactatTTCGTGA-GGATAATTTTCACAAAGCCATATAGCATAGGGAGAATGTATCTGGAACTCAAGAGATTTACTGGAtatattaatttatt-acactgcc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876808 116 + 3513951 gat-agataaaggagttactatTTCATGAGGGATAATTTTCACAAAGCCATATAGTgtagggagaatgtatctggaactcaagagatttactggatatattaatttatt-acactgcc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 18351 110 - 4077172 gac-agagaagggagttactatttggtgaggagcaattatcctCCAGCCACCTACTGTA-GGAGAATAT------AGCTCAGGAGATTTACTGAGtatattaatttactggcactgcc i cebCap1.NW_016107543v1 C 0 I 1197 s aotNan1.NW_018505111v1 12177 110 - 94492 gac-agaggaaggagttactatttggtgaggagtaattatcttCAAGCCACCTATTGTA-GGAGAATAT------AGCTCAGGAGATTTACTGAGtatattaatttactagcactgcc i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=453041.000000 s hg38.chr17_JH159148v1_alt 58737 93 + 88070 ctg-atgaattactg-aaaaaaagtggcttaaatttat-ttatcaaagttctgaaggcctcttttctgaaattaaggtgttggcaatgttgttttc s panTro5.chr17 16369718 80 + 83181570 ata-ataaattactgtaaaccaagtggcttaaatttatcttttcacag---------------ttcagaaattaaggttttggcaatgttgttttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16274842 93 + 83442489 ctg-ataaattactg-aaaaaaagtggcttaaatttat-ttatcaaagttctgaaggcctcttttctgaaattaaggtgttggcaatgttgttttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121698 93 + 4267968 ctg-atgaattactg-aaaaaaagtggcttaaatttat-ttatcaaagttctgaaggcctcttttctgaaattcaggtgttggcaatgttgttttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111385 80 - 2193130 ata-ataaattactgtaaaccaagtggcttaaatttagttttttacag---------------ttcggaaattaagatgttggcaatgttgttttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171562 77 - 77216781 atg-ataaattactgtaaaccaagtggcttaaatttattttttcacagt---------------tccaaaattaaggtgtttgcaa---tgttttc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081868 77 - 80997621 atg-ataaattactgtaaaccaagtggcttaaatttattttttcacagt---------------tccaaaattaaggtgtttgcaa---tgttttc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128268 77 + 10377808 atg-ataaattactgtaaaccaagtggcttaaatttattttttcacagt---------------tccaaaattaaggtgtttgcaa---tgttttc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016118 93 - 8458610 ctg-atgaattactg-aaaaaaagtggcttcaattta-tttatcaaagttatgaagacctctactctgaaatcaaggtgttggcaatattgttttc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962884 94 + 75148670 atg-atgaattactgcaaaccaagt-gcttaaatttattttttcacagtcccaaaggctattagtccgaaattaaggtgttggtaatgttgttttg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220426 95 + 4244037 atg-atgaattactgcaaaccaagtggcttaaatttattttttcatggtcccaaaggctattagtctgaaattaaggtgttagcaatgttgttttc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219416 93 + 4569836 ctg-atgaattactg-aaaaaaagtggcttcaattta-tttatcaaagttatgaagacctctattctgaaattaaggtgttggcaatattgttttc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9718 79 - 12755 ----atgaaaaactatga--caaatggcttaaatgtatgtt---acagttctgaagg--------ctaaaattaaggtgttggcaatgctgttttc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1876924 82 + 3513951 ----atgaaaaactatga--caagtggcttaaatttacgttctcacagttctgaagg--------ctaaaattaaggtgttggcaatgctgttttc i saiBol1.JH378271 C 0 C 0 s aotNan1.NW_018505111v1 12287 96 - 94492 ataaacaaattactgcaaatcaagtgacttaaatttgttttgtcacagttccgaaggctactagtctaaaattaaggtgttggcaatgttgttttc i aotNan1.NW_018505111v1 C 0 I 1099 e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=2242587.000000 s hg38.chr17_JH159148v1_alt 58830 370 + 88070 atctgaagactgcgagggaagtatctgttccacgtctctctccctgacgtgtcaaagtctatcatctccaagtgtgtttgacataatttttctattatatccatact-gtctctgaatttctcccttgtgaatagaca-cagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttatcagataacactttagatgattctatttgaatatgaattttgagggacGCAAATGAACCCATAACACTGCAGAatctcacagtgtgtccatgcctagtgataaccacaaatgagtaaaaacaacaatcacgg-tggacaatggtatagtaaccaggggctcagacccttcaggaaggatgctct s panTro5.chr17 16369798 372 + 83181570 atctgaagcctgtgagggaagtacatgttccaggtctctctccttgacttgttgatgtctatcatttccatgtgtgtttgacataatttttctgttacatgcatgctggtctctgaatttcccccttttgtatagacatcagtcatatttaatcagaggcctaattgtttccaatatgaccttgccttatcacataacactttaaatgattctatttgaatatgagttttgggggacacaaattaacccataacaCTGGAGAATCTCATAGTGTGTCCATGTCCAGTGATAACCACAAATCGGTAAGAACAGCAATCACAG-TGGACAGTGGTATAGTAACTAGAGGCTCAGACAATTTAGGAAGGAagttat i panTro5.chr17 C 0 I 9 s panPan2.chr17 16274935 368 + 83442489 atcggaagactgcgagggaagtatctgttccaggtctctctccctgacgtgtcgaagtctatcatctccaa--gtgtttgacataatttttctactatatccatact-gtctctgaatttctcctttgtggatagaca-cagtcatatttaatcagaggcctaattgtttccaatatgaccctgtcttatcagataacattttagatgattctatttgaatatgaattttgagggacacaaatgaacccataacaCTGCAGAatctcatagtgtgtccatgcccagtgataaccacaaatgagtaaaaacagcaatcacgg-tggacaatggtatagtaaccagggtctcagacccttcaggaaggatgctct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4121791 370 + 4267968 atctgaagactgcgagggaagtaactgttccaggtctctctccctgacgtgtcgaagtctatcatctccaagtgtgtttgacataatttttctattatatccatact-atctctgaatttctcccttgtggatagaca-cagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttatcagataacattttagatggttctatttgaatatgaattttgagggacacaaatgaacccataacactgcagaatctcatagtgtgtccatgcccagtgataaccacaaatgagtaaaaacagcaatcacgg-tggacaatggtatagtaaccaggggctcagacccttcaggaaggatgctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111465 371 - 2193130 atctgaagcctgtgagggaagtacctgttccaggtctctctccttgacttgttgatgtctatcatttccatgtgcgtttgacataatttttctgttatatgcatact-gtctctgaatttcccccttttatatagacatcagtcatatttaatcagaggcctaattgtttccaatatgaccttgtcttatcacataacactttaaatgattctatttGAATATGAGTTTTGGGGGAGAAAAATTAACCCATAAcactggagaatctcatagtgtgtccatgtccagtgataaccagaaatcagtaagaacagcaatcacag-tggacagtggtatggtaactagaggctcagacccttcaggaaggaagttct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171639 360 - 77216781 atctgaaggctgtgagggaagtgtctgttccacgtttctctccttgacttgttgatgtctatcatttccatgtatgtttgacataatttttctactatatgcatact-gtctctgaatttcccctttctatgcagacatcagtcatatttaatcagaggaccaattgtttccaatatgactttgtcttaacatgtaacatttcaaatgcttttacttgtgtatgaattttggtggacacaaattaacccataacaCTGGCGAatctcat--agtgtccatgcccaatgataaccacaaatg---------agcaatcccag-tggacaatggtatagtaactagaggctcagacccttcaggaaggaagttct i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28081945 362 - 80997621 atctgaaggctgtgagggaagtgtctgttccacgtttctctccttgacttgttgatgtctatcatttccatgtatgtttgacataatttttctactatatgcatact-gtctctgaatttctcctttctatgcagacatcagtcatatttaatcagaggaccaattgtttccaatatgactttgtcttaacATGTAACATTTCAAATGCTTTTACTTGTGtatgaattttggtggacacaaattaacccataacaCTGGCGAATCTCATAGAGTGTccatgcccaatgataaccacaaatg---------agcaatcccag-tggacaatggtatagtaactagaggctcagacccttcaggaaggaagttct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128345 362 + 10377808 atctgaaggctgtgagggaagtgtctgttccacgtttctctccttgacttgttgatgtctatcatttccatgtgtgtttgacataatttttctactatatgcatact-gtctctgaatttcccctttctatgcagacatcagtcatatttaatcagaggaccaattgtttccaatatgactttgtcttaacatgtaacatttcaaatgcttttacttgtgtatgaattttggtggacacaaattaacccataacaCTGGCGAATCTCATAGAGTGTccatgcccaatgataaccacaaatg---------agcaatcccag-tggacgatggtatagtaactagaggctcagacccttcaggaaggaagttct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016211 369 - 8458610 atctgaaggctgtgagagacgtatctgttccaggtttctctccttgacttgtagatgtctatcatttccatgtgtgtttgacagaatttttctactatatgcatact-gtctccgaatttctcccttgta-atagaca-cagtcatatttaatcagaggcctaattgtttccagtgtgaacttatcttatcagataacattttaaatgattctatttGAATTTGAATTTTGAGGGACACAAATTAACCCATAACATTGCAGAatctcatagtgtgttcatgcccagcgataaccacaaatgagtaaaaatagcaatcacag-tggacaattgtatagaaactagaggctcagacccttcaagaaggaagctct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64962978 365 + 75148670 atctgaaggctgcgagggaagtatctgttcccagtctttctccttaacttgcagatgtctatcatttccatgtgtgtttcatataatttttctactatat-catact-gtct--gaatttcccccatgta--tagatattagtcatatttaatcagagaccTCAGTGTTTCCCATATGAACTTGTCTT-TCACATAACATTTTAAATGATTCTATTTGTATATGAATTTTGGTGGACATGAATTAACCCATAACACTGCAGAatctcatagtgtgtccatgcccagtgataaccacagatgagtaagaacagcaatcacag-gggacagtggtatagtaactagaggctcagaccctttaggaaggaagttct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220521 366 + 4244037 gtctgaaggctgcgagggaaggatctgtttccggtctttctcctTAACTTGCAGATGTCTATTATTTCCATGTGTGTTTCATATAATTTTTCTACTATAT-CATACT-GTCT--GAATTTCCCCCATGTA--TAGATATCAGTGATATTTAATCAGAGACCTAAGTGTTTCCCATACGAACTTGTCTTGTCACATAACATTTTAAATGATTCTATTTGTGTATGAATTTTGGTGGACACGAATTAACCCATAACACTGCAGAatctcatagtgtgtccatgcccagtgataaccacagatgagtaagaacagcaatcacag-tggacagtggtatagtaacgagaggctcagacccttcaggaaggaagttct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219509 369 + 4569836 atctgaaggctgtgagagaagtatctgttccaggtttctctccttgacttgtagatgtctatcatttccatgtgtgtttgacagaatttttctactatatgcatact-gtctccgaatttctcccttgta-gtagaca-cagtcatatttaatcagaggcctaattgtttccaatttcacattgtcttatcagataacattttaaatgattctatttgaatatgaattttgagggacacaaattaacccataacactgcagaatctcatagtgtgtccatgcccagcgataaccacaaatgagtaaaaacagcaatcacag-tagacaattgtatagaaactagaggctcagacccttcaggaaggaagctct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 9797 369 - 12755 ctctgaaggctgtgaaggaagtgcctgttccaggtcactctccttgacctgtggatgtctatcttctccatgtgtctcttacatcatcttccctctctatgcatcct-gttt--taattcccccttttcattcagacatcagtcatattgaatcagaggcacaatttattccaatattacctcatcttaacatattgca-tttaaatgaccctatttGAATATAAATTCTTGGGGACATAACTGAACCCATAACCCTGGAGTATCTTATAGTGTGTCCATGCACAGTGATACACACAAATGAGTAACAAAagcaaccacagttggacaatggtatagtaactagagagtcagatccattagtcaggaagttca i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877006 369 + 3513951 ctctgagggctgtgagggaagtgcctgttccaggttgctctccttgacctgtggatatctatcttctccatatgtctcttacatcatcttccctctctatgcatcct-gttt--taattctcccttttcatacagacatcagtcatattgaatcagaggcacaatttatcccaatatcacctcatcttaacatattgca-tttaaatgaccctatttgaatataaattcttggggacacaattcaacccataacccgggagtatcttatagtgaatccatacacagtgatacacacaaatgagtaacagaagcaaccacagctggacaatggtttagtagctagagagtcagatccattagtcaggaagttct i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=49350.000000 s hg38.chr17_JH159148v1_alt 59200 7 + 88070 gagctac s panPan2.chr17 16275303 7 + 83442489 gagctac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122161 7 + 4267968 gagctac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111836 7 - 2193130 gagctac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30171999 7 - 77216781 gagctac i rheMac8.chr16 C 0 I 27 s macFas5.chr16 28082307 7 - 80997621 gagctac i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128707 7 + 10377808 gagctac i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016580 7 - 8458610 gagctac i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963343 7 + 75148670 gagctat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220887 7 + 4244037 gagctac i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219878 7 + 4569836 gaactac i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10166 7 - 12755 gagctac i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877375 7 + 3513951 gagctac i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e panTro5.chr17 16370170 9 + 83181570 I a score=9977.000000 s hg38.chr17_JH159148v1_alt 59207 2 + 88070 tc s panPan2.chr17 16275310 2 + 83442489 tc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122168 2 + 4267968 tc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111843 2 - 2193130 tc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28082314 2 - 80997621 tt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128714 2 + 10377808 tt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016587 2 - 8458610 tc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963350 2 + 75148670 tc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220894 2 + 4244037 tc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219885 2 + 4569836 tc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10173 2 - 12755 tc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877382 2 + 3513951 tc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30172006 27 - 77216781 I e panTro5.chr17 16370170 9 + 83181570 I a score=96754.000000 s hg38.chr17_JH159148v1_alt 59209 26 + 88070 tatca-gcagttatctagaccaaca--ag s panTro5.chr17 16370179 27 + 83181570 tatcaggcagttatccagATCAAGA--AG i panTro5.chr17 I 9 C 0 s panPan2.chr17 16275312 26 + 83442489 tatca-gcagttatctagaccaaca--ag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122170 26 + 4267968 tatca-gcagttatctagaccaaca--ag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111845 27 - 2193130 tatcaggcagttatccagaccaaga--ag i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28082316 25 - 80997621 cttcatgtggttacctagaccaaga---- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128716 25 + 10377808 cttcatgtggttacctagaccaaga---- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016589 27 - 8458610 tatcaggcagttatctagaccaacaag-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963352 26 + 75148670 tatca-gcaattatctagaccaaga--ag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220896 26 + 4244037 tatca-gcaattaattagaccaaga--ag i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219887 27 + 4569836 tatcaggcagttatctagaccaaca--ag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10175 27 - 12755 cttcaggcaattatctagatcaacc--ag i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877384 27 + 3513951 cttcaggcaattatctacatcaacc--ag i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30172006 27 - 77216781 I a score=267380.000000 s hg38.chr17_JH159148v1_alt 59235 37 + 88070 agtgctggccaggggtgaagggaGAATAGAACTCTTG s panTro5.chr17 16370206 37 + 83181570 ACTGCTGGCCAGCGGTGAAGGGAGAATAGAACTGGTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275338 37 + 83442489 agtgctggccaggggtgaagggagaatagaaCTCTTG i panPan2.chr17 C 0 T 5381 s gorGor5.CYUI01015385v1 4122196 37 + 4267968 agtgctggccaggggtgaagggagaatagaaCTCTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111872 37 - 2193130 agtgctggccaggggtgaagggagaatagaaccggtg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172033 37 - 77216781 agtgctggccagggatgaaaggagaatagaactggtg i rheMac8.chr16 I 27 C 0 s macFas5.chr16 28082341 37 - 80997621 agtgctggccagggatgaaaggagaatagaactggtg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128741 37 + 10377808 agtgctggccagggatgaaaggagaatagaactggtg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016616 37 - 8458610 agtgctggccaggggtgaagggagaatagaactggtG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963378 37 + 75148670 aatgctgtccaggggtgaagggagaatagaactggta i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220922 37 + 4244037 aatgctgtccaggggtgaatggagaatagaactggtg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219914 37 + 4569836 agtgctggccagggatgaagggagaatagaactaatg i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10202 37 - 12755 agtgctggccaggggtgaagggaatacagaactggtg i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877411 37 + 3513951 agtgctggccaggggtgaagggaatatagaactggtg i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=319423.000000 s hg38.chr17_JH159148v1_alt 59272 52 + 88070 GTAATTAACGGAGTTTATGAAACTTAGGTGCACTGTATTATAGCAGAAGTA-A s panTro5.chr17 16370243 52 + 83181570 GTAATTAACGGAGACTGTGAATCTCAGGTGCACTGTACTATAGCAGCAGTA-A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16269994 52 + 83442489 gtaattaatggagcttatgaatctcaggtgCACTGTATTATAGCAGCAGTA-A i panPan2.chr17 T 5381 C 0 s gorGor5.CYUI01015385v1 4122233 52 + 4267968 GTAATTAACTGAGTTTATGAAACTTAGGTGCACTGTATTATAGCAGAAGTA-A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111909 52 - 2193130 gtaattaatggagattgtgaatctcaggtgcactgtactatagcagcagta-a i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172070 52 - 77216781 gtaattaatggagattgtgaatctcaggtgCACTGTATTACAGCAGCAGTA-A i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082378 52 - 80997621 gtaattaatggagattgtgaatctcaggtgCACTGTATTACAGCAGCAGTA-A i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128778 52 + 10377808 gtaattaatggagattgtgaatctcaggtgCACTGTATTACAGCAGCAGTA-A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016653 52 - 8458610 ATAATTAATGGAGTTTATGAAACTCGGGTGCACTGTATTATAGCAGAAGTA-A i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963415 52 + 75148670 ataattaatggagattgtgaatctcaAGTGCACTGTATTACAGCAGCAGTA-A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2220959 52 + 4244037 ataattaatggagattgtgaatctcaggtgCACTGTATTACAGCAGCAGTA-G i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2219951 52 + 4569836 gTAATTAATGGAGTTTGTGAAACTCAGGTGCACTGTATTATAGCAGAAGTA-A i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10239 51 - 12755 gaaactgatggagattatgaatctcagAAGGAACCCATTACAGCAGAAGTA-- i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877448 52 + 3513951 gaaactgatggagattataaatctcagAATTAACTCATTACAGCAGCAGTAt- i saiBol1.JH378271 C 0 T 5993 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=341816.000000 s hg38.chr17_JH159148v1_alt 59324 77 + 88070 GTGTAGATTATTTAATTGGCCTTCGTTTTATATCTCActtcctctcctttcttttcctttccttc----ctctttctt-----------------ctt s panTro5.chr17 16370295 77 + 83181570 GTGTAGCTTATTTCATTGGCCTTCATTTTACATCTCActtcctctcctttcttttcatttccttc----ttctctctc-----------------ctt i panTro5.chr17 C 0 T 5592 s panPan2.chr17 16270046 77 + 83442489 GTGTAGCTTATTTCATTGGCCTTCATTTTATGTCTCACTTCCTCCCCCAGcttttcgtttccttc----ttcattttt-----------------ctt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122285 76 + 4267968 GTGTAGATTATTTAATTGGCCTTCA-TTTATATCTCActtcctctcctttcttttcctttccttc----ttctttctt-----------------ctt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2111961 77 - 2193130 gtgtagcttatttcattggccttcattttACATCTCActtcctctcctttcttttcatttccttc----ttctctctc-----------------ctt i nomLeu3.chrUn_GL397460_1 C 0 I 6 s rheMac8.chr16 30172122 76 - 77216781 GTGTTG-CTATTTCACTGGTATTCATTTTACAtcttacttcctctcctttcttttcctttacttc----ttctctctc-----------------ctt i rheMac8.chr16 C 0 I 2 s macFas5.chr16 28082430 76 - 80997621 GTGTTG-CTATTTCACTGGTATTCATTTTACAtcttacttcctctcctttcttttcctttacttc----ttctctctt-----------------ctt i macFas5.chr16 C 0 I 2 s macNem1.NW_012014910v1 2128830 76 + 10377808 GTGTTG-CTATTTCACTGGTATTCATTTTACATCTTACttcctctcctttcttttcctttacttc----ttctctctc-----------------ctt i macNem1.NW_012014910v1 C 0 I 2 s cerAty1.NW_012006043v1 2016705 77 - 8458610 GTGTAGATTATTTAATTGGCCTTCATTTTATATCTCActtcctctcctttcttttcctttccttc----ttctttcct-----------------ttc i cerAty1.NW_012006043v1 C 0 I 2 s chlSab2.chr16 64963467 93 + 75148670 GTGTAACTTATTTCATTGGCCTTCATTTTACATCTAACGTCCTCCTCTTtttctttcttt-ctct----ctttcttccttctttctttcttttctttt i chlSab2.chr16 C 0 I 2 s manLeu1.NW_012106252v1 2221011 76 + 4244037 GTGTAGCTTATGTCATTGGCCTTCATTTTACATCTCACttcctcctttttctttttcttt-cttt----ctctctgtc-----------------ttt i manLeu1.NW_012106252v1 C 0 I 2 s colAng1.NW_012122154v1 2220003 77 + 4569836 GTGTAGATTATTTAATTGTTCTTCATTTTATATCTCACTTCCTCCCctttcttttcctttccttc----ttctttctt-----------------tct i colAng1.NW_012122154v1 C 0 I 2 s calJac3.chr5_ACFV01180105_random 10290 34 - 12755 ----------------------------------tcttttctcttcttttcctttctttgctttt------------------------------ctt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1871507 81 + 3513951 CTGTTCCTTGTTCCATTGGCCTTCATTTTATATATCACTCCCCCTCCTTTCTTCTCTTAGCTTCTTAATTTCTAccta-----------------cct i saiBol1.JH378271 T 5993 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=19592.000000 s hg38.chr17_JH159148v1_alt 59401 9 + 88070 tctttcttt s panTro5.chr17 16364780 9 + 83181570 tctttcttt i panTro5.chr17 T 5592 C 0 s panPan2.chr17 16270123 9 + 83442489 tctttcttt i panPan2.chr17 C 0 I 5596 s gorGor5.CYUI01015385v1 4122361 9 + 4267968 tgtttcttt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112044 9 - 2193130 ccttccttc i nomLeu3.chrUn_GL397460_1 I 6 C 0 s rheMac8.chr16 30172200 7 - 77216781 tttctct-- i rheMac8.chr16 I 2 C 0 s macFas5.chr16 28082508 7 - 80997621 tttctct-- i macFas5.chr16 I 2 C 0 s macNem1.NW_012014910v1 2128908 7 + 10377808 tttctct-- i macNem1.NW_012014910v1 I 2 C 0 s cerAty1.NW_012006043v1 2016784 7 - 8458610 tctttct-- i cerAty1.NW_012006043v1 I 2 C 0 s chlSab2.chr16 64963562 7 + 75148670 cctttct-- i chlSab2.chr16 I 2 C 0 s manLeu1.NW_012106252v1 2221089 7 + 4244037 tccttct-- i manLeu1.NW_012106252v1 I 2 C 0 s colAng1.NW_012122154v1 2220082 7 + 4569836 tctttct-- i colAng1.NW_012122154v1 I 2 C 0 s calJac3.chr5_ACFV01180105_random 10324 9 - 12755 tctttctct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1871588 9 + 3513951 cccttcttc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=49886.000000 s hg38.chr17_JH159148v1_alt 59410 25 + 88070 ctttctttcttttc-----tttctttcttt--- s panTro5.chr17 16364789 22 + 83181570 ctttct---tttcc-----ttccttccttt--- i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122370 22 + 4267968 cttttc---ctttc-----ttccttccttt--- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112053 25 - 2193130 ttttccttccttcc-----tttctttcttc--- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172207 25 - 77216781 ctccctccctccct-----tttctttcttt--- i rheMac8.chr16 C 0 I 14 s macFas5.chr16 28082515 24 - 80997621 ctccctccctccct-----tttctttctt---- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128915 25 + 10377808 ctccctccctccct-----tttctttcttt--- i macNem1.NW_012014910v1 C 0 I 14 s cerAty1.NW_012006043v1 2016791 24 - 8458610 ttccttccttcctt-----tctctttctt---- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963569 25 + 75148670 ttctttctttcttt-----ctttctttctt--- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221096 25 + 4244037 ttcttttcttttct-----tgtctttcttt--- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2220089 30 + 4569836 ttctttctttctttctttctttctttcttt--- i colAng1.NW_012122154v1 C 0 I 12634 s calJac3.chr5_ACFV01180105_random 10333 27 - 12755 cgttccttccttcc-----ttccttccttc-ct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1871597 28 + 3513951 ccttcttccctttc-----tcccttccttctct i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e panPan2.chr17 16270132 5596 + 83442489 I a score=17750.000000 s hg38.chr17_JH159148v1_alt 59435 22 + 88070 tccttccttccttcctt-----ttttc s panTro5.chr17 16364811 14 + 83181570 ttctcccttcc-------------tgc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122392 14 + 4267968 ttctcccttcc-------------tgc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112078 27 - 2193130 ttcttcctttctttcttccctgctttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28082539 7 - 80997621 ------------tcttt-----ct--- i macFas5.chr16 C 0 I 4 s cerAty1.NW_012006043v1 2016815 22 - 8458610 tttttccttccttcttt-----ctttc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963594 22 + 75148670 tctttctttctttcttt-----ctttc i chlSab2.chr16 C 0 I 28 s manLeu1.NW_012106252v1 2221121 22 + 4244037 tctttctttttttcctt-----ctttc i manLeu1.NW_012106252v1 C 0 T 5508 s calJac3.chr5_ACFV01180105_random 10360 22 - 12755 tccttccttccttcctt-----ccttc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1871625 22 + 3513951 tctttcctccctctctt-----cttcc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e macNem1.NW_012014910v1 2128940 14 + 10377808 I e rheMac8.chr16 30172232 14 - 77216781 I e panPan2.chr17 16270132 5596 + 83442489 I a score=12328.000000 s hg38.chr17_JH159148v1_alt 59457 3 + 88070 ctc s panTro5.chr17 16364825 3 + 83181570 ctc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122406 3 + 4267968 ctc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112105 3 - 2193130 ttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172246 3 - 77216781 ctc i rheMac8.chr16 I 14 C 0 s macFas5.chr16 28082550 3 - 80997621 ctc i macFas5.chr16 I 4 C 0 s macNem1.NW_012014910v1 2128954 3 + 10377808 ctc i macNem1.NW_012014910v1 I 14 C 0 s cerAty1.NW_012006043v1 2016837 3 - 8458610 ctc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963644 3 + 75148670 ctc i chlSab2.chr16 I 28 I 44 s calJac3.chr5_ACFV01180105_random 10382 3 - 12755 ctt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1871647 3 + 3513951 ttc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e panPan2.chr17 16270132 5596 + 83442489 I a score=34548.000000 s hg38.chr17_JH159148v1_alt 59460 18 + 88070 ccttcctccctcccttcc s panTro5.chr17 16364828 18 + 83181570 cctccctccctcccttcc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122409 18 + 4267968 cctccctccatcccttcc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112108 18 - 2193130 cttccttttctcttttct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172249 18 - 77216781 ccttccttccttcctttt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082553 14 - 80997621 tctcccttccttcc---- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128957 14 + 10377808 ccttccttccttcc---- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016840 14 - 8458610 ccttccttcctttc---- i cerAty1.NW_012006043v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10385 18 - 12755 ccttccttccttccttcc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1871650 18 + 3513951 cctttcttccctcctttc i saiBol1.JH378271 C 0 I 5832 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e chlSab2.chr16 64963647 44 + 75148670 I e panPan2.chr17 16270132 5596 + 83442489 I a score=30977.000000 s hg38.chr17_JH159148v1_alt 59478 21 + 88070 cttcccttctctctcccttt---c s panTro5.chr17 16364846 24 + 83181570 cttcccttctctctctctctatat i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122427 24 + 4267968 cttcccttctctctctctctatat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112126 21 - 2193130 tttcctttctttctctcttt---c i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172267 21 - 77216781 tttcctttctttctttcttt---c i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082567 20 - 80997621 -ttcctttttttcttccttt---c i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128971 20 + 10377808 -ttcctttttttcttccttt---c i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016854 19 - 8458610 --tccgcctaccctctctct---c i cerAty1.NW_012006043v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10403 15 - 12755 ------tAttctctcttgct---c i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877500 16 + 3513951 -----cttttctcttctttt---c i saiBol1.JH378271 I 5832 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e chlSab2.chr16 64963647 44 + 75148670 I e panPan2.chr17 16270132 5596 + 83442489 I a score=52377.000000 s hg38.chr17_JH159148v1_alt 59499 36 + 88070 tctctctt------tc-tttctt--tctcttt------ctttctttctttt s panTro5.chr17 16364870 41 + 83181570 tctttctt------tc-tttcgg--tctcttt-ccttccttccttccttcc i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122451 43 + 4267968 tctttctt------tcttttctt--tctttctttctttctttctttctttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112147 37 - 2193130 tttttctt------tc-tttctt--tctcctt-----ccttccttcctttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172288 36 - 77216781 --tttctt------tc-tttctt--tctttct----ttctttctttctttc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082587 36 - 80997621 --tttctt------tc-tttctt--tctttct----ttctttctttctttc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2128991 30 + 10377808 --tttctt------tc---------tctttct----ttctttctttctttc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016873 23 - 8458610 --t----------------------tttctct----ttctttctttctttc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963691 40 + 75148670 tctttctt------tc-tttctttctttttct----ttccttccttccttc i chlSab2.chr16 I 44 I 3 s calJac3.chr5_ACFV01180105_random 10418 24 - 12755 --------------tt-tttctt--cctctct--attttttat-------- i calJac3.chr5_ACFV01180105_random C 0 T 5824 s saiBol1.JH378271 1877516 45 + 3513951 -ctttctttgcatttc-tttctt--tctctct--ccttccttccttctttc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e panPan2.chr17 16270132 5596 + 83442489 I a score=63924.000000 s hg38.chr17_JH159148v1_alt 59535 21 + 88070 tatctttctttctttcttttt s panTro5.chr17 16364911 21 + 83181570 ttccttccttccttccttcct i panTro5.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122494 21 + 4267968 tttctttctttctttctttct i gorGor5.CYUI01015385v1 C 0 I 15 s nomLeu3.chrUn_GL397460_1 2112184 21 - 2193130 ctcttttcttttcttttcttt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172324 21 - 77216781 tttctttctttctttctttct i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082623 21 - 80997621 tttctttctttctttctttct i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129021 21 + 10377808 tttctttctttctttctttct i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016896 21 - 8458610 tttctttctctctctctttct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963734 21 + 75148670 tttctttctttctttctttct i chlSab2.chr16 I 3 C 0 s calJac3.chr5_ACFV01180105_random 4618 21 - 12755 TATATTTACTTtttctttcct i calJac3.chr5_ACFV01180105_random T 5824 C 0 s saiBol1.JH378271 1877561 14 + 3513951 -------cttccttccttccc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e panPan2.chr17 16270132 5596 + 83442489 I a score=6006.000000 s hg38.chr17_JH159148v1_alt 59556 1 + 88070 t s panTro5.chr17 16364932 1 + 83181570 t i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275728 1 + 83442489 t i panPan2.chr17 I 5596 C 0 s gorGor5.CYUI01015385v1 4122530 1 + 4267968 t i gorGor5.CYUI01015385v1 I 15 C 0 s nomLeu3.chrUn_GL397460_1 2112205 1 - 2193130 t i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172345 1 - 77216781 t i rheMac8.chr16 C 0 I 4 s macFas5.chr16 28082644 1 - 80997621 t i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129042 1 + 10377808 t i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016917 1 - 8458610 t i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963755 1 + 75148670 t i chlSab2.chr16 C 0 I 1 s calJac3.chr5_ACFV01180105_random 4639 1 - 12755 t i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877575 1 + 3513951 t i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I a score=54047.000000 s hg38.chr17_JH159148v1_alt 59557 16 + 88070 ccttccttccttcctt s panTro5.chr17 16364933 16 + 83181570 ccttccttccttcctt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275729 16 + 83442489 ccttccttccttcctt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122531 16 + 4267968 cctgccttccttcctt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112206 16 - 2193130 cctttctttctctctt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28082645 12 - 80997621 ----tctttctttctt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129043 12 + 10377808 ----tctttctttctt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016918 16 - 8458610 ccttccttccttcctt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963757 16 + 75148670 ccttccttccttcctt i chlSab2.chr16 I 1 C 0 s calJac3.chr5_ACFV01180105_random 4640 16 - 12755 cctccctcccttcctt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877576 16 + 3513951 ccttcttcctttcttc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e rheMac8.chr16 30172346 4 - 77216781 I a score=3767.000000 s hg38.chr17_JH159148v1_alt 59573 2 + 88070 cc s panTro5.chr17 16364949 2 + 83181570 tc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275745 2 + 83442489 cc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122547 2 + 4267968 cc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112222 2 - 2193130 tc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2016934 2 - 8458610 tc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963773 2 + 75148670 cc i chlSab2.chr16 C 0 I 65 s calJac3.chr5_ACFV01180105_random 4656 2 - 12755 cc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877592 2 + 3513951 ct i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e macNem1.NW_012014910v1 2129055 0 + 10377808 C e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=21566.000000 s hg38.chr17_JH159148v1_alt 59575 34 + 88070 c------------------------ctccctcagttcctccccgctccctcctttccc s panTro5.chr17 16364951 34 + 83181570 c------------------------ctccctcggttcctccttgctccctcctttccc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275747 34 + 83442489 c------------------------ctccctcggttcctccccgctccctcctttccc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122549 58 + 4267968 ttcgttccttccttccttcctttccctccctcggttcctccctgctccctcctttccc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112224 34 - 2193130 t------------------------ttttctttctttctttctccttccttccttcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2016936 33 - 8458610 ------------------------tttctcttcctccctcctgcctccctctattcc- i cerAty1.NW_012006043v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 4658 24 - 12755 ----------------------------------tccttcctttcttcttcctcgctt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877594 24 + 3513951 ----------------------------------tccttcctttcttccctccctccc i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e manLeu1.NW_012106252v1 2221143 5508 + 4244037 T e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e chlSab2.chr16 64963775 65 + 75148670 I e macNem1.NW_012014910v1 2129055 0 + 10377808 C e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=13830.000000 s hg38.chr17_JH159148v1_alt 59609 38 + 88070 tccctccctc-cttcctgtccttccttccttccttct----tt------ s panTro5.chr17 16364985 18 + 83181570 tccc---------tcctgtccgtcc----------------tt------ i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275781 42 + 83442489 tccctccctc-cttcctgtccttccttccttccttctttcctt------ i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122607 22 + 4267968 tccc---------tcctgtccgtctttcc------------tt------ i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112258 30 - 2193130 ttct---------ctctctctctctttctctctttct----tt------ i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2129055 33 + 10377808 ----ctcttt-ctttct-ttctttctttctttctttc----tt------ i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2016969 36 - 8458610 -ccttccttc-cttcct-tccttccttccttccttcc----tt------ i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2215635 37 + 4244037 tccttccttc-cttcct-tccttccgtccttccttcc----tt------ i manLeu1.NW_012106252v1 T 5508 C 0 s calJac3.chr5_ACFV01180105_random 4682 44 - 12755 ttcctctctctctttct-tgcttgctttctctctctt----tctttctt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877618 43 + 3513951 tctctccctc-cttcct-ttctttctttctttcttAT----TCTCTCTC i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e chlSab2.chr16 64963775 65 + 75148670 I e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=4300.000000 s hg38.chr17_JH159148v1_alt 59647 2 + 88070 cc s panTro5.chr17 16365003 2 + 83181570 cc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275823 2 + 83442489 cc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122629 2 + 4267968 cc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112288 2 - 2193130 ct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2129088 2 + 10377808 tc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2017005 2 - 8458610 cc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963840 2 + 75148670 tt i chlSab2.chr16 I 65 C 0 s manLeu1.NW_012106252v1 2215672 2 + 4244037 cc i manLeu1.NW_012106252v1 C 0 I 5525 s calJac3.chr5_ACFV01180105_random 4726 2 - 12755 cc i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877661 2 + 3513951 GC i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2220119 12634 + 4569836 I e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=61644.000000 s hg38.chr17_JH159148v1_alt 59649 14 + 88070 t-tccttccttctct s panTro5.chr17 16365005 14 + 83181570 t-tccttccttctct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275825 14 + 83442489 t-tccttccttctct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122631 14 + 4267968 t-tccttccttctct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112290 14 - 2193130 t-tccttccttcctt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2129090 14 + 10377808 t-ttctttctttctt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2017007 14 - 8458610 t-tccttccttcctt i cerAty1.NW_012006043v1 C 0 I 2 s chlSab2.chr16 64963842 14 + 75148670 t-tccttccttccct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221199 14 + 4244037 t-tccttccttccct i manLeu1.NW_012106252v1 I 5525 C 0 s colAng1.NW_012122154v1 2232753 14 + 4569836 t-tccttccttccct i colAng1.NW_012122154v1 I 12634 C 0 s calJac3.chr5_ACFV01180105_random 4728 14 - 12755 t-tttttctctctct i calJac3.chr5_ACFV01180105_random C 0 I 5700 s saiBol1.JH378271 1877663 15 + 3513951 TCTCTTTCTTCCTCT i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=18342.000000 s hg38.chr17_JH159148v1_alt 59663 9 + 88070 ctgtctttc s panTro5.chr17 16365019 9 + 83181570 ctgtctttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275839 9 + 83442489 ctgtctttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122645 9 + 4267968 ctgtctttc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112304 8 - 2193130 ctttc-ttc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2017023 9 - 8458610 ctctcattc i cerAty1.NW_012006043v1 I 2 C 0 s chlSab2.chr16 64963856 9 + 75148670 ctgttgttc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221213 9 + 4244037 ctgttgttc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2232767 9 + 4569836 ctgttgttc i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1877678 9 + 3513951 GTATTTTTT i saiBol1.JH378271 C 0 I 2 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e calJac3.chr5_ACFV01180105_random 4742 5700 - 12755 I e macNem1.NW_012014910v1 2129104 0 + 10377808 C e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=50373.000000 s hg38.chr17_JH159148v1_alt 59672 13 + 88070 tgtttttctttcc s panTro5.chr17 16365028 13 + 83181570 tgtttttctttcc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275848 13 + 83442489 tgtttttctttcc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122654 13 + 4267968 tgtttttctttcc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112312 13 - 2193130 tttctttcttcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2017032 13 - 8458610 tgtttttctttct i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963865 13 + 75148670 tgtttttctttct i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221222 13 + 4244037 tgtttttctttct i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2232776 13 + 4569836 tgtttttctttct i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10442 13 - 12755 tgttctcatttct i calJac3.chr5_ACFV01180105_random I 5700 C 0 s saiBol1.JH378271 1877689 13 + 3513951 TGTTCTCATTTCT i saiBol1.JH378271 I 2 C 0 e aotNan1.NW_018505111v1 12383 1099 - 94492 I e cebCap1.NW_016107543v1 18461 1197 - 4077172 I e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macNem1.NW_012014910v1 2129104 0 + 10377808 C e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=18713.000000 s hg38.chr17_JH159148v1_alt 59685 14 + 88070 ttctt--ttctctttc s panTro5.chr17 16365041 14 + 83181570 ctctt--ttctctttc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16275861 14 + 83442489 ttctt--ttctctttc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122667 14 + 4267968 ttctt--ttctctatc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112325 10 - 2193130 tcctt--ttgtc---- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s cerAty1.NW_012006043v1 2017045 10 - 8458610 tttct--ctttc---- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963878 10 + 75148670 ttcat--ctttc---- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221235 10 + 4244037 ttcgt--ctttc---- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2232789 10 + 4569836 tccgt--ctttc---- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10455 16 - 12755 ttcttAGTTTTcttct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877702 16 + 3513951 TTCTTAGTTtttttct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19658 14 - 4077172 ttctt--ttgtctttc i cebCap1.NW_016107543v1 I 1197 C 0 s aotNan1.NW_018505111v1 13482 14 - 94492 ttctt--ttccctttc i aotNan1.NW_018505111v1 I 1099 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macNem1.NW_012014910v1 2129104 0 + 10377808 C e macFas5.chr16 28082657 0 - 80997621 C e rheMac8.chr16 30172346 4 - 77216781 I a score=19994.000000 s hg38.chr17_JH159148v1_alt 59699 3 + 88070 ctt s panTro5.chr17 16365055 3 + 83181570 ctt i panTro5.chr17 C 0 I 5483 s panPan2.chr17 16275875 3 + 83442489 ctt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122681 3 + 4267968 ctt i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30172350 3 - 77216781 ctc i rheMac8.chr16 I 4 C 0 s macFas5.chr16 28082657 3 - 80997621 ctc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129104 3 + 10377808 ctc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2017055 3 - 8458610 ctt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64963888 3 + 75148670 ctc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221245 3 + 4244037 ctc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2232799 3 + 4569836 ctc i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10471 3 - 12755 cct i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877718 3 + 3513951 cct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19672 3 - 4077172 ctt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13496 3 - 94492 ctt i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e nomLeu3.chrUn_GL397460_1 2112335 0 - 2193130 C a score=1055014.000000 s hg38.chr17_JH159148v1_alt 59702 130 + 88070 cTCCTCTCATCTTCTGTCCCTtctcttcctctgcttcctctcttcctcttcttcctTCTCCTAGAGGTTGTGGCTGCCCATCCTATTTAAGTAGCAAATATTTGACTTGAGTGGAGCTAATTGTAGATTG s panTro5.chr17 16370541 130 + 83181570 ctccactcatcttctgtcccttctcttactcctctttctcacctcctcttcttccttcttctAGATCTTGTGGCTGTCCATCACATTTAAGTAGCAAAGGTTTTACTTGAGTGGAGCTAATTGTAGATCA i panTro5.chr17 I 5483 C 0 s panPan2.chr17 16275878 130 + 83442489 ctcctctcatcctctgtcccttctcttcctctgctttctctcttcctcttcttccttcTCCTAGAGCTTGTGGCTGCCCATCCTATTTAAGTAGCAAATATTTGACTTGAGTGGAGTTAATTGTAGATTG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122684 127 + 4267968 ---ctctcatcttctgtcccttctcttcctctgcttcctctcttcctcttcttctttcTCCTAGAGCTTGTGGCTGTCCATCCTATTTAAGTAGCAAATATTTGACTTGAGTAGAGCTAGTTGTAGATCG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112335 130 - 2193130 ctccactcatcttctgtcccttctcttactcctctttctcaccttctcttcttccttcttCTAGAGCTTGTGGCTGTCCATCACATTTAAGTAGCAAAGGTTTTACTTGAGTGGAGCTAATTGTATATCG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172353 127 - 77216781 ctccactcatcttctgtcccttctcttactcctctttctcacctcctcttcttc---cttctAGAGCTTGTGGCTGTCCATCACATTTAAGTAGCAAAGATTTGACTTGAGTGGAGCTAATTGTGGATCG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082660 130 - 80997621 ctccactcatcttctgtcccttctcttactcctctttctcacctcctcttcttccttcttCTAGAGCTTGTGGCTGTCCATCACATTTAAGTAGCAAAGATTTGACTTGAGTGGAGCTAATTGTGGATCG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129107 130 + 10377808 ctccactcatcttctgtcccttctcttactcctctttctcacctcctcttcttccttcttctAGAGCTTGTGGCTGTCCATCACATTTAAGTAGCAAAGATTTGACTTGAGTGGAGCTAATTGTGGTTCG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2017058 130 - 8458610 ctcctcttatcttctttcccttctctttttcagcttcctctcttcctcttcttccttcTCATAGAGCTTGTGGCTGTTCATCGTATTTAAGTAGCAAATATTTGACTTGAGTGGAGCTAATTGTAGATCG i cerAty1.NW_012006043v1 C 0 I 13322 s chlSab2.chr16 64963891 129 + 75148670 ctcctctcatcttctgtcccttcccttcctccgcttcctctcttcctcttcttccttcttCTAGAGCTTGTGGCTGTCCATCGTATTTAAGTAGC-AATATTTGACTTGAGTGGAGCTAATTGTAGGTCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221248 129 + 4244037 ctcttctcatcttctgtcccttcccttcctccacttcctctcttcctcttcttccttCTCCTAGAGCTTGTGGCTGTCCATCGTATTTAAGTAGC-AATATTTGACTTGAGTGGAGCTAATTGTAGGTCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2232802 129 + 4569836 cacttctcatcttctgtcccttcccttcctccacttcctctcttcctcttcttccttCTCCTAGAACTTGTGGCTGTCCATCGTATTTAAGTAGC-AATATTTGACGTGAGTGGAGCTAACTGTAGGTCA i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10474 116 - 12755 ---ctctca---------ccttctgttcctcctcttc--ctcctccttttcctctttcttctAAGGTTCATGATTGTCCACCACATTTAAGAAGCAAAGATTGGATATGAGTGGAGCAAATGATAGATCA i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877721 116 + 3513951 ---ctctca---------ccttctgtttctcctcttc--ctcctccttttcctctttcttctAAGGTTCATGATTGTCCACCAAATTTAAGAAGCAAAGATTGGATTTGAGTGGAGCAAATGGTAGATCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19675 127 - 4077172 ---ctctcatcttctatcccttctctttctcctcttcctctcctcctctttttccttcttCTAGAGTTTGTGGCTGTGCATGACATTTAAGCAGCAAAGATTTGACTTGAGTGGAGCTAATTGTAGGTTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13499 130 - 94492 ctcctcccatcttctgtcccttctctttctcctcttcctctccttctctttttccttcttCTAGAGCTTGTGGTTGTCCATGACATTTAAGTAGCAAATATCTGACTTGAGTGGAGCTAATTGTAGATTG i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=4319535.000000 s hg38.chr17_JH159148v1_alt 59832 498 + 88070 TAGACAAGTTTTCATGACTGCACCCATATATCTTGGATGTTACTGTGCTTggatcaatttccatctgtcaaaatctgcatctctgtgcctaagggctcttgtattgcagctgtagaaagtcatgccacctgtgaatgcaacacagagaaaaacactcaaccaatgattctggagagctgatttataaagactttagcttcctcattcctgaagtagggtaattctag-ctgtgtg-tttttcatcatttctgatagttttccctttagtttaagctttagttggtgactgtgatactgacttaatagtgtgccttcttctgtatcacttccccagtccctaccggtgtgatctgcacttctcagtaaactagtttccctggaatattttcttcaaagtctcttctgggagaaactaatctatgacaATACGttaactctctcagcctcaaatttctcatctctacaaggggaacattaatacctattttgaaagtttgtt s panTro5.chr17 16370671 498 + 83181570 TAGGTAAGTTTTCATGACTGCACCCATATATATTAGatcttagtgtgcttggactaatttccatctgttagaatctgcatctctgtgcctaagagctcttgtattgctgctgtaagaagtcatgtcacctgtgaatgcaacacagagaaaaactctcaaccaatgattctggagagctgatttataaagactctagcttcctcattcctgaagtaggataactctag-ctgtgtgtttttttgtcatttctgatagttttccctttagtttaagctttagttggtgactgtgatactgacttgatagtgtacccttttctgtatcacttccccaat-cctaccagtgtgatctgcacttccgaataaactagtttcactggaacgctttcctcagagtctcttctgggagaaactaatctatgacaATACACTAActctctcagcctcaattttttcatctctacaaagggaacattaatacctgttttgaaagtttgtt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276008 497 + 83442489 TAGACAAGTTTTCATGACTGCACCCATATATCTTGGATGTTACTGTGCTTggatcaatttccatctgtcaaaatctgcatctctgtgcctaagggttcttgtattgcagctgtggaaagtcatgccacctgtgaatgcaacacagagaaaaacactcaaccaatgattctggagagctgatttataaagactttagcttcctcattcctgaagtagggtaattctag-ctgtgtg-tttttcatcatttctgatagttttccctttagtttaagctttagttggtgactgtgatactgacttaatagtgtgccttcttctgtatcacttctccaatccctaccggtgtgatctgcacttcccagtaaactagtttccttggaatcttttcttcaaagtctcttctgggagaaactaatctatgacaATATGttaactctctcagcctcaaatttctcatctcta-aaggggaacattattacctattttgaaagtttgtt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4122811 493 + 4267968 TAGACAAATTTTCATGACTGCACCCATATATCTTGGatgttagtgtgcttggatcaatttctatctgtcaaaatctgcatctctgtgcctaagggctcttgtgttgcagctgcagaaagtcatgccacctgtgaatgcaacacagagaaaaacactcaaccaatgattctggagagctgatttataaagactctagcttcctcattcctgaagtaggataattccac-ctatgtg-tttttcatcatttctgataattttcactttagtttaagctttagttggtgactgtgatactgacttaatagtgtacccttttctgtatcacttccccagtccctaccagtatgatctgcacttcccagtaaactagtttcactggaat-tttttttcagagtctcttctgggagaaactcatctatgacTATACGTTAA----ctcagcctcaaatttctcatctctacaaggggaacattaatacctattttgaaagtttgtt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112465 498 - 2193130 TAGATAACTCTTCATGACTGCACCCATATATATTAGatcttagtgtgcttggactaatttccttctgttagaatctgcatctctgtgcctaagggctcttgtattgctgctgtaagaagtcatgtcacctgtgaatgcaacacagagaaaaacactcaaccaatgattctggagagctgatttataaagactctagcttcctcattcctgaagtaggataattctag-ctgggtg-tatttcgtcatttctgataattttccctttagtttaagctttagctggtgactgtgatactgacttgatagtgtacccttttctgtatcacttctccaatccctaccagtgtgatctgcacttcccagtaaactagtttcactggaatgctttcctcagagtctcttctgggagaaactaatctatgacaATACCCCAActctctcaccctcaattttctcatctccacaaagggaatattaatatctattttgaaagtttgtt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172480 496 - 77216781 TAGACAAGTTTTCATGACTGCATCCATATATATTAGATCGTAGTGTGCTTggactaatttccatctgttagactctgcatcactgtgcctaagggctcttgtattgctgctgtaagaagtcatgtcacctgggaaggcaacacagagaaaaacactcaaccaatgattctggagagctgatgtataaaga--ctagcttcctcattcctgaagtaggataattctag-ctgtgtg-tttttcatcatttctgataattttccctttagtttaagctttagttggtgactgtgatactgacttaatagtgaacccctttctgtatcacttccccaatccctaccaatgtgatctgcacttcccagtaaactgctttcactagaatctttttttcagagtctcttctgggagaaactaatctatgacaATACACTAActctcgcagcctcgattttctcatctctacaaagggaacgttaatacctattttgaaagtttgtt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28082790 496 - 80997621 TAGACAAGTTTTCATGACTGCATCCATATATATTAGATCGTAGTGTGCTTGGACTAATTTCCATCTGTTAGACTCTGCATCACTGTGCCTAAGGGCTCTTGTATTGCTGCTGTAAGAAGTCATGTCACCTGGGAAGGCAACACAgagaaaaacactcaaccaatgattctggagagctgatgtataaaga--ctagcttcctcattcctgaagtaggataattctag-ctgtgtg-tttttcatcatttctgataattttccctttagtttaagctttagttggtgactgtgatactgacttaatagtgaacccttttctgtatcacttccccaatccctaccaatgtgatctgcacttcccagtaaactgctttcactagaatctttttttcagagtctcttctgggagaaactaatctatgacaATACACTAActctctcagcctcgattttctcatctctacaaagggaacgttaatacctattttgaaagtttgtt i macFas5.chr16 C 0 I 313 s macNem1.NW_012014910v1 2129237 496 + 10377808 TAGACAAGTTTTCATGACTGCATCCATATATATTAGATCGTAGTGTGCTTGGACTAATTTCCATCTGTTAGACTCTGCATCACTGTGCCTAAGGGCTCTTGTATTGCTGCTGTAAGAAGTCATGTCACCTGGGAAGGCAACACAgagaaaaacactcaaccaatgattctggagagctgatgtataaaga--ctagcttcctcattcctgaagtaggataattctag-ctgtgtg-tttttcatcatttctgataattttccctttagtttaagctttagttggtgactgtgatactgacttaatagtgaacccttttctgtatcacttccccaatccctaccaatgtgatctgcacttcccagtaaactactttcactggaatctttttttcagagtctcttctgggagaaactaatctatgacaATACACTAActctctcagcctcgattttgtcatctctacaaagggaacgttaatacctattttgaaagtttgtt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2030510 498 - 8458610 TAGACAAGTTTTCATGACTGCACCCATATATCTTGGATATTAATGTGCTTGGATTAATTTCCATCTGTCAAAATCTGCATCTCTGTGCCTAAGGGCTCTTGTATTGCAGCTGTAGAAAGTCATGCCACCTATGAATGCAACACAGAGAAAAACACTCAACCAGTGATTCTGGACAGCTGATTTATAAAGACTCTAGCTTCCTCATTCCTGAAGTAGGATAATTCTAG-CTGTGTG-TTTTTCATCATTTCTGATAATTTTCCCTTTAACGTAAGCTTCAGTTGGTGACTGTGATACTGACTTAATAGTGAAcccttttctgtgtcacttccccaatccctaccagtgtgatctgcgcttcccagtaaactactttcactggaatctttttttcagagtctcttctatgagaaactaatctatgacaATACGTTCATtctctcagcctcaaatttctcgcctctacaaagggaacattaatacctattttgaaagtttgtt i cerAty1.NW_012006043v1 I 13322 C 0 s chlSab2.chr16 64964020 498 + 75148670 TAGACAAGTTTTCATGACTGCACCCATATATCTTGGATATTAGTGTGCTTGGATTAATTTCCATCTGTCAGAGTCTGCATCTCTGTGCCTAAGGGCTCTTGTATTGCACCTGTAGAAAGTCATGTCACCTGTGAATGCAACACAGAGGAAAACActcaaccaacaattctggagagctgatttataaagactctagcttcctcattcctgaagtaggataattctag-ctgtgtg-tttttcatcatttctgataattttccctgtaacataagtttcagttggtgactgtgatactgacttaatagtgaacccttttctgtgtcacttccccactccctaccagtgtgatctgcacttcccagtaaactactttcactggaatcttttcttcagagtctcttctatgagaaactaatctatgacaATACGTTCActctctcagcctcaaatttctcatctctacaaagggaacattaatacctattttgaaagtttgtt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221377 496 + 4244037 TAGACAGGTTTTCATGACTGCACCCATATATCTTGGATATTAATGTGCTTGGATTAATTTCCATCAGTCAAAATCTGCATCTCTGTGCCTAAGGGCTCTTGTATTGCAGCTGTAGAAAGTCATGCCACCTGTGAATGCAACACAGAGG-AAACACTCAACCAGTGATTCTGGAGAGCTGATTTATAAAGACTCTAGCTTCCTCATTCCTGAAGAAGGATAATTCTAG-CTGTGTG-TTTTTCATCATTTCTGATAATTTTCCCTTTAACATAAGCTTTAGTTGGTGACTGTGATACTGACTTAATAGTGAActcttttctgtatcactt-cccaatccctaccagtgtgatctgcacttcccagtaaactactttcactagaacctttttttctgagtctcttctatgagaaactaatctatgacaATACGATAActctctcagcttcaaatttctaatccctacaaagggaacattaatacctattttgaaagtttgtt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2232931 495 + 4569836 TAGACAAGTTTTCATGACTGCACCCATATATCTTGGCTATTAGTGTGCTTGGATTAATTTCTGTCCATCAAAATCTGCATCTCTGTGCCTAAGGGCTCTTGCATTGCAGCTGTAGAAAGTCATGCCACCTGTG-ATGCAACGCAGGGGAAACCACTCAACCAGTGATTCTGGAGAGCTGATTTATAAAGACTCTAGCTTCTTCATTCCTGAAGTAGGATAATTCTAG-CTGTGTG-TTTTTCATCATTTCTGATAATTTTCCCTTTAACATAAGCTTCAGTTGGTGACAGTGATACTGACTTAATAGTGAACAc-tttccgtatcacttccccaatccctaccagtgtgatctgcac-taccagtaaactactttcactggaatctttttttcagagtctcttttgtgataaactaatctatgacaATATGttaactctctcagcctcaaatttctcatctctacaaagggaacattaatacctactttgaaaatttgtt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 10590 487 - 12755 CAGACTGGTCTTCATTACCACACCTGTTTATCATGAAACCTAGTGTGCTCAGACCAATTTCCATCTGTCAGAATCTGCATCTCTGTCCCTTAGGGCTATTGTATTGCAAATACAGAAAGTCACGTCACCTGTACATGCTAGAGGgagaaaagcattcaactaatgactct-gagaatggatttatgaagactccagctttctcattcctgaagtaggacaattctaatttgtgtg-tttttcatcatttctgataaatttccctttagcttaagcttcagttgatctctgtcatggtggcttcatagcctaccctttTCTGTATCAGTTCCATAATCCCTCCCGGTGTGATCTGCACTTCCTGATACAC-----GCTTTGGAACCTTTCTCTCAGACTGTCTTCTGAGA------AAACTACGACAttacattacttctcttagcctcgatttcctcatgtctatgtttggaacactaatgactattttgaaagtttgtt i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1877837 496 + 3513951 TAGACTGGTCTTCATTACCACACCTGTTTATCATGAAACCTagtgtgctcggaccaattttcatctgccagcatctgcttctctgtcccttagggctctTGTATTGCAAATACAGAAAGTTATGTCACCTGTACATGCTAGAGGGAGAAAAATATTCAACTAATGATTCTGGAGAGTGGATTTATGAAGACTCCAGCTTTCTCATTCCTGAAGTAGGACAATTCTGATTTGTGTG-TTTTTCATCATTTCTGATAAATTTCCCTTTAGCTTAAGCTTCAGTCGATCTCTGTCATGCTGACATCATAGTCTACCCTTTTCTGTATCACTTCCATAATCCCTCCTGGTGCGATCTGCACTTCCTGATACACTACATGCATTGGAACCTTTTTCTCAGAGTATCTTCTGAGAAAAACCAAACTATGACAttacattacttctcttagcctcagtttcctcatgtctatgtttggaacactaatgcctgttttgaaagttt--- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 19802 498 - 4077172 TAGAAAAGTTTTCATGACTGCACCCATATAACTTGGATCTTATTGTGCTTggactaatttccatctgccagaatctgcatctctgtgcctaaggactcttgaattgcagctgtagaaagccatgttacctgtgcatgacacacacagaaaaacactcaaccaatgattctggagtgctgatttatgaagactgtagcttcctcattcctgaagtaggataattctag-ctgtgtc-tttttcatcatctctgatagttttccctttagtttaagctttagttggtcagcgtgatactggcttaatagtgtaccattttctgtatcacttcctcaatccctaccagtgtaaactgcacttcccaatgaactactttcactagaatcttttcctcagtgtctcttctgagagaaactaaactacgacaTTGTGttaactctcttagcctcagttgtctcatctctacgatgagaacattaatacctattttgaaagtttgct i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 13629 493 - 94492 TAGAAAAGTTTTCATGACTGCACCCATATAACTTGGatcttagtgtgcttggactaatttccatctgccagaatctgcatctctgtgcctaaggactcttgtattgcagctgtagaaagtcatgtcacctgtgcatgacacacagagaaaaacactcaaccaatgattctggagtgctgatttatgaagactctagcttcctcattcctgaagtaggataattctag-ctgtgtc-ttttccatcatttctgatagttttctct-----ttaagctttagctggtcactgtgatactggcttaatagtgtaccattttctgtatcacttccccaatccctaccagtgtaatctgcacttcctaataaactactttcgctagaatcttttcctcagtgtatcttctgagagaaactaaactatgacaTTGTGttaactgtcttagcctcagttgtctcatctgtaccatgagaacattaatacctattttgaaagtttgct i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=44446.000000 s hg38.chr17_JH159148v1_alt 60330 6 + 88070 aaatag s panTro5.chr17 16371169 6 + 83181570 aaagaa i panTro5.chr17 C 0 I 308 s panPan2.chr17 16276505 6 + 83442489 aaatag i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123304 6 + 4267968 aaatag i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112963 6 - 2193130 aaagaa i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30172976 6 - 77216781 aaagaa i rheMac8.chr16 C 0 I 313 s macFas5.chr16 28083599 6 - 80997621 AAAGAA i macFas5.chr16 I 313 C 0 s macNem1.NW_012014910v1 2129733 6 + 10377808 aaagaa i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031008 6 - 8458610 aaagag i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964518 6 + 75148670 aaagag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221873 6 + 4244037 aaagag i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233426 6 + 4569836 aaagag i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 11077 6 - 12755 caagaa i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1878333 5 + 3513951 -aagaa i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20300 6 - 4077172 aaaaaa i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14122 6 - 94492 aaagaa i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=31470.000000 s hg38.chr17_JH159148v1_alt 60336 7 + 88070 ttaataa s panTro5.chr17 16371483 7 + 83181570 ttaataa i panTro5.chr17 I 308 C 0 s panPan2.chr17 16276511 7 + 83442489 ttaataa i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123310 7 + 4267968 ttaataa i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2112969 7 - 2193130 ttaataa i nomLeu3.chrUn_GL397460_1 C 0 I 305 s rheMac8.chr16 30173295 7 - 77216781 TTAATAA i rheMac8.chr16 I 313 C 0 s macFas5.chr16 28083605 7 - 80997621 TTAATAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129739 7 + 10377808 ttaGTAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031014 7 - 8458610 ttaataa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964524 7 + 75148670 ttaatag i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221879 7 + 4244037 ttaatag i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233432 7 + 4569836 ttcacaa i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 11083 7 - 12755 ttaatga i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1878338 7 + 3513951 ttaatca i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20306 1 - 4077172 t------ i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14128 1 - 94492 t------ i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=21840.000000 s hg38.chr17_JH159148v1_alt 60343 2 + 88070 ta s panTro5.chr17 16371490 2 + 83181570 ta i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276518 2 + 83442489 ta i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123317 2 + 4267968 ta i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113281 2 - 2193130 ta i nomLeu3.chrUn_GL397460_1 I 305 C 0 s rheMac8.chr16 30173302 2 - 77216781 TA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28083612 2 - 80997621 TA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2129746 2 + 10377808 TA i macNem1.NW_012014910v1 C 0 I 299 s cerAty1.NW_012006043v1 2031021 2 - 8458610 ta i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964531 2 + 75148670 ta i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221886 2 + 4244037 ta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233439 2 + 4569836 ta i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 11090 2 - 12755 ta i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1878345 2 + 3513951 ta i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20307 2 - 4077172 ta i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14129 2 - 94492 ta i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=69994.000000 s hg38.chr17_JH159148v1_alt 60345 8 + 88070 atgtacac s panTro5.chr17 16371492 8 + 83181570 atgtacac i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276520 8 + 83442489 atgtacac i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123319 8 + 4267968 atgtacac i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113283 8 - 2193130 atgtacac i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30173304 8 - 77216781 ATGTACAC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28083614 8 - 80997621 ATGTACAC i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2031023 8 - 8458610 aggtacac i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964533 8 + 75148670 atgtacac i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221888 8 + 4244037 atgtacac i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233441 8 + 4569836 atgtacac i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 11092 8 - 12755 atgtacat i calJac3.chr5_ACFV01180105_random C 0 C 0 s saiBol1.JH378271 1878347 8 + 3513951 atgtacat i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20309 8 - 4077172 atgtacac i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14131 8 - 94492 ttgtacac i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macNem1.NW_012014910v1 2129748 299 + 10377808 I a score=954561.000000 s hg38.chr17_JH159148v1_alt 60353 138 + 88070 aaagcatttatccagtacccatcatagagcaggcAACACAGA----ATTAGTG-TTTTTTGTTCAGAAAATTC-----CCAAGTTTTATGTTGAAGATAAGAATATTTTTGTAATAATTAAATAGATCAACTAAATACGTTtttttct-- s panTro5.chr17 16371500 134 + 83181570 aaagcatttagccaatatgtctcctatagcaggcagcccaGA----ATTAGTG-TTTTT-GTTCAGAAAATTT-----CTAATTTTAATGTTGAAGATAAGAATATTTTTGTAATAATTAACCAGATCAACCAAATAC---tttttcg-- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276528 136 + 83442489 aaagcatttagccaatacccatcacatagcaggcAACACAGA----ATTAGTG-ATTTTTGTTCAGAAAATTT-----CTAATGTTAATGTTGAAGATAAGAATATTTTTGTAATAATTAACTAGATCAACTAAATAC--Ttttttca-- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123327 137 + 4267968 aaagcatttatccagtacccatcatagagcaggcAACACAGA----ATTAGTG-ATTTTTGTTCAGAAAATTC-----CCAAGTTTTATGTTGAAGATAAGAATATTTTTGTAATAATTAAATAGATCAACTAAATAC-GTtttttct-- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113291 134 - 2193130 aaagcatttaTCCAATATGTCTCCTATAGCAGGCAGCCCGGA----ATTAGTG-ATTTT-GTTCAGAAAATTT-----CTAACTTTAATGTTGAAGATAAGAATATTTTTGTAATAATTAACTAGATCAACTAAATAC---ttttcct-- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30173312 129 - 77216781 AAAGCCTTTAGCCAATACCCATCCTATGGTAGGCAGCCCAGA----ATTAGTG--TTTTTGTTCAGAAAATTT-----CTAATTTTCATGTTGAAGA-----ATATTTTTGTAATAATTAACTAAATCAACTAAATAC---tttttct-- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28083622 129 - 80997621 AAAGCCTTTAGCCAATACCCATCCTATGGTAGGCAGCCCAGA----ATTAGTG--TTTTTGTTCAGAAAATTT-----CTAATTTTCATGTTGAAGA-----ATATTTTTGTAATAATTAACTAAATCAACTAAATAC---tttttct-- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130047 129 + 10377808 aaaGCCTTTAGCCAATACCCATCCTATGGTAGGCAGCCCAGA----ATTAGTG--TTTTTGTTCAGAAAATTT-----CTAATTTTCATGTTGAAGA-----ATATTTTTGTAATAATTAACTAAATCAACTAAATAC---tttttct-- i macNem1.NW_012014910v1 I 299 C 0 s cerAty1.NW_012006043v1 2031031 136 - 8458610 aaagcacttagccaatacccatcagatagcaggcatcccaga----attagtG-TTTTTTGTTCAGCAAATTC-----CTAATTTTCATGTTGAAGATAAG-AATTTTTTGTAATAATTAACTAGATCAACTAAATACA-Ttttttct-- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964541 135 + 75148670 aaagcacttagccaata-ccatcatatagcaggcatcccaga----attagtg---ttttgttCAGAAAATTC-----CTAATTTTAATGTTGAAGATAAGAATATTTTTGTAATAATTAACTAGATCAACTAAATACATTtttttct-- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2221896 138 + 4244037 aaaacatttagccaatacccatcagatagcaggcatcccaga----attagtG-TTTTTTGTTCAGAAAATTC-----CTAATTTTAACGTTGAAGGTAAGAATATTTTTGTAATAATTAACTAGATCAACTAAATACATTtttttct-- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233449 139 + 4569836 aaagcatttagccaatacccatcatatagcaggcatcccaga----attggtgtttttttgttCAGAAAATTC-----CTAATTTTCATGTTGAAGGTTAGAATATTTTTGTAATAATTAACTAGATCAACTAAATACATTtttttct-- i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 11100 144 - 12755 aaaagatttagtcaatatccatcaaataataggcaactgaaaacatattagttcGTTTCTGTCCAGAAAATTCCTAAACTAATTTTAATGTTGATGATAAGAATATGTTTATAATAAATAACTAGATAAACTA---AC---TTTttttct i calJac3.chr5_ACFV01180105_random C 0 I 4 s saiBol1.JH378271 1878355 144 + 3513951 aaaagatttagtcaatatccatcagataataggcaactgaaaacatattagttcttttCTATCTAGAAAATTCCTAAACTAATTTTAATATTGATGATAAGAATATGTTTATAACAAATAACTAGGTCAACTA---AC---tttttttct i saiBol1.JH378271 C 0 T 5849 s cebCap1.NW_016107543v1 20317 140 - 4077172 aaagcatttagcaAATATGCATCATAGTGTAGGCAACCCAGAATATATTCGTG-TTTTTTGTTCAGAAAATTC-----CTAATTTCAATGTTGAAGATAAGGATATTTTTATAATAGTTAAC-AGATCAACTAAATAC---TTttttcct i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14139 138 - 94492 aaagcatttagaaaatacgcatcatagaataggcaacccagaatatattggtG-TTTTTTGTTCAGAAAATTC-----CTAATTTTAATGTTGAAGATAAGAATATTTTTATAATAATTAAG-AGATCAACTAAATAC---tttttct-- i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=53334.000000 s hg38.chr17_JH159148v1_alt 60491 6 + 88070 agctgt s panTro5.chr17 16371634 6 + 83181570 agctgt i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276664 6 + 83442489 aagtgt i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123464 6 + 4267968 agctgt i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113425 6 - 2193130 agcagt i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30173441 6 - 77216781 agctgt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28083751 6 - 80997621 agctgt i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130176 6 + 10377808 agctgt i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031167 6 - 8458610 agctgt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964676 6 + 75148670 agctgt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222034 6 + 4244037 agctgt i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233588 6 + 4569836 agctgt i colAng1.NW_012122154v1 C 0 C 0 s calJac3.chr5_ACFV01180105_random 11248 6 - 12755 agttgt i calJac3.chr5_ACFV01180105_random I 4 N 0 s saiBol1.JH378271 1872650 6 + 3513951 agcttt i saiBol1.JH378271 T 5849 C 0 s cebCap1.NW_016107543v1 20457 6 - 4077172 agctat i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14277 6 - 94492 agctgt i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=1616147.000000 s hg38.chr17_JH159148v1_alt 60497 219 + 88070 attgaggtataattgac--aaacaaaaa-ttgtgtacatttcaggtatagaaggtgatgctct--gatatatatattgattgtga----ataacatatttattaggtcacttagttaccatttcctttttatttttctggtgtgaacatttaagatctaccttctcagtaaatttcaggtatatgataaagtgttttta---actatagtcatattactgtacattagacc s panTro5.chr17 16371640 219 + 83181570 attgaggtataattgac--aaataaaaa-ttgtgtctatttcaggtatagaaggtgatgctct--aatatatatatccattgtga----ataacatgtttattagcccacgtagttaccatttcctttttatttttgtggtgtgaacatacaagatctaacctcttggcaaatttcaggtgtatgatacagtgtttaca---actatagtgacactactgtacagtagaca i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276670 220 + 83442489 gcttacgtaaaattgac--aaataaaaatttgtgtatatttcaggtatacaacatgatgctct--gatatatatattcattgtga----ataacatatttattaggtcacttagttaccatttcctttttatttttctggtgtgaacatttaagatctaccttctcagtaaatttcaggtatatgataaagtgttttta---actatagtcatattactgtacattagacc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123470 219 + 4267968 attgaggtataattgac--aaacaaaaa-ttgtgtacatttcaggtatacaaggtgatgctct--gatatatatattcattgtga----ataacatatttattaggtcacttagttaccatttcctttttatttttctggtgtgagcatttaagatctaccttctcagtaaatttcaagtatatgataaagtgttttta---actatagtcatattactgtgcattagacc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113431 219 - 2193130 attgaggtgtaattgac--aaataaaaa-ttgtgtctgtttcaggtatacaaggtgatgctct--aatgtatgtatccattgtga----ataacatatttattagcacacgtagttaccatttcctttttatttttgttgtgtgaacatataagatctaacttcttggcaaatttcaggtatatgataaagtgtttata---actatagtgatattactgtacattagaca i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30173447 219 - 77216781 attgaggtgtaattaac--aaataaaaa-ttgtgtctatttcaggtatgaaaggtgaagctct--aatatatatattcattggga----ataacatatgtattagcccatgtagttaccatttcctttttatttttgtggtgtgaacattcaagatctaacttcttggcaaatttcaggtatgtgataaagtgtttata---actatagtgacattactgtacagtagaca i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28083757 219 - 80997621 attgaggtgtaattaac--aaataaaaa-ttgtgtctatttcaggtatgaaaggtgaagctct--aatatatatattcattggga----ataacatatgtattagcccatgtagttaccatttcctttttatttttgtggtgtgaacattcaagatctaacttcttggcaaatttcaggtatgtgataaagtgtttata---actatagtgacattactgtacagtagaca i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130182 219 + 10377808 attgaggtgtaattaac--aaataaaaa-ttgtgtctatttcaggtatgaaaggtgaagctct--aatatatatattcattggga----ataacatatgtattagcccatgtagttaccatttcctttttatttttgtggtgtgaacattcaagatctaacttcttggcaaatttcaggtatgtgataaagtgtttata---actatagtgacattactgtacagtagaca i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031173 219 - 8458610 actgaggtataattgac--aaatgaaaa-ttgtgtatatttcaggtatacaaggtgatgctct--gatatatatattcattgtga----atagcatatttattaggtcacgtagttaccatttcctttttatttttgtgatgtgaacatttaagatctaccttctcagttaatttcagatatatgataatatgtttttc---actatagtcacattactgtacattagaaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964682 219 + 75148670 gctgaggtataattgac--aaatgaaaa-ttgtatatatttcaggaatacaaggtgatgctct--gacatatatattcattgtga----atagcatattcattaggtcacgtagttaccatttcctttttatttttgtggtgtgaacatttaagatctaccttctcagttaatttcagatatatgataacgtgttttta---gctatagtcacattactgtacattagaca i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222040 213 + 4244037 attgaggtataattgac--aaatgaaaa-ttgtgtatatttcaggaatacaaggtgatgctct--ggtatatatattcactgtga----atagcatatttattaggtcacgtagttaccatttcctttttatttttgtagtgtgaacatttaagatctaccttctcagtttatttcagatatatgataaagtgttttta---gctatagtcacattactatagac------ i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2233594 219 + 4569836 actgaggtataatcgac--aaatgaaaa-ttgtgtctatttcaggtatacaaggtgatgctct--aatatatatattcattgtga----atagcatatttattaggtcacgtggttaccatttccttttaatttttgtggtgtgaacatttaagatgtaacttctcagttaatttcagatatatgataaagtgttttta---gctatagtcacattactgtacattagact i colAng1.NW_012122154v1 C 0 I 7632 s saiBol1.JH378271 1872656 230 + 3513951 attgaggcacaactaacaaaaataaaaa-ttgtgtatatttaatgtgtgtgaggtgttgtttcaggatatatacatttattgtaaaatcataatatattccttagctcacatagttacaatttccttttcatttgtatgctgtgaacagctcagatctaccttcttagaaaatttcaggtatacaataaaatattgttgttcactacagtcactttgttgtacactagatc i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 20463 219 - 4077172 actgaggaataattgac--aaataaaaa-ttattcatatttcaggtacacaaggtgatgctct--gatatatatattcattgtga----atgacatctttattagctcacgtggttaccatttcctttttatttttatggtgtgaacattgaagatataccttctcagcaaatttcaggtacatgataaagtattttta---actatagtcacattaccgtacagtagaca i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14283 219 - 94492 actgaggaataattgac--aaataaaaa-ttattcatatttcaggtatacaaggtgatgctct--gatatatatattcattgtga----ataacatctttattagctcacatagttgccatttcctttttatttttatggtgtgaacatttaagatttactttctcagcaagtttcaggcatatgataaagcattttta---actgcagtcacattaccatacagtagaca i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=2436566.000000 s hg38.chr17_JH159148v1_alt 60716 306 + 88070 tactgaacttattcatctttcataactgaTGCTAGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACGATGATGACAGTAAGTGGCTGTTGTCTCTTAGCCAAGTCTTCAGAGCATTCTAGATTCACAGTCTCAGAAGT-GGCATCTGTCATGGAAATCTACATTGTTAGCTCATCAGAGGTATTTCTACCACTCCCCTGCTTGTAGGAGGCCCCAAGAAGGTGACCTAGGTCCCCAATCTTTGTATTTCTCACAGATCCAGTATCAATCAA-CCTTCCGTGGGTGAATGCTT s panTro5.chr17 16371859 308 + 83181570 tgctgaacttattcacctttcataactgaTGCTAGTCAAAAGGAATGTCCTAGTT-TTCATGTCCTTTACTTCATCCCTGAACGATGATCACAGTAAGCGGCCTTCATCCCTCAGCCAAGTCTTCAGAGCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTGTTAGCTCATCAGAGGTGTTTCTACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGATCCAGGTCCCCAAACTTTGTATTTCTGTCAGAGCCAGTATCAATCGATCTTTCCCTGAGTGAATGCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16276890 307 + 83442489 tactgaacttattcatctttcataactgaTGCTAGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACGATGATGACAGTAAGTGGCTGTTGTCTCTTAGCCAAGTCTTCAGAGCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTGTTAGCTCATCAGAGGTATTTCTACCATTCCTCTGTTGGTAGGAGGCCCCAAGAAGGTGACCTAGGTCCCCAATCTTTGTATTTCTCACAGATCCAGTATCAATCAA-CCTTCCATGGGTGAATGCTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123689 308 + 4267968 tactgaacttattcatctttcataactgaTGCTAGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACGATGATGACAGTAAGTGGCTGTTGTCTCTTAGCCAAGTCTTCAGAGCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCTACATTGTTAGCTCATCAGAGGTATTTCTACCACTCCCCTGCTTGTAGGAGGCCCCAAGAAGGTGCCCCAGGTCCCCGACTTTTCAATTTCTCTCAGAGCCAGCATCAATCAATCCTTTCATGAGTGAATGGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113650 308 - 2193130 tgctgaacttattcatctttcataactgaTGCTGGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACGATGATCACAGTAAGTGGCCTTCAACCCTCAGCCAAGTCTTTAGACCATTCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATGTACATTGTTAGCTCTTCAGAGGTATTTCTACCACTCCCCTGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCCAAACTTTATATTTCTCTCAGAGCCAGTATTGATCAGTCCTTCCATGAGTGAATGCTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30173666 307 - 77216781 cgctgaactgattcatcattcataactgaTGCTGGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACAATGATCACAGTAAGCGGCCGTTGTCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTCACAGTCTCAGAAGTTGGCATCTATCATGGAAATCTACTTTGTTAGCTCATTAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCTAAACTTTTTATTTCTCTTAGAGCCAGTATCAATCAATCCTTCCATGAGTGAATGCTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28083976 307 - 80997621 tgctgaactgattcatcattcataactgaTGCTGGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACAATGATCACAGTAAGCGGCCGTTGTCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTCACAGTCTCAGAAGTTGGCATCTATCATGGAAATCTACTTTGTTAGCTCATTAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCTAAACTTTTTATTTCTCTTAGAGCCAGTATCAATCAATCCTTCCATGAGTGAATGCTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130401 307 + 10377808 tgctgaactgattcatcattcataactgaTGCTGGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACTTCATCCCTGAACAATGATCACAGTAAGCGGCTGTTGTCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTCACAGTCTCAGAAGTTGGCATCTATCATGGAAATCTACTTTGTTAGCTCATTAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCTAAACTTTTTATTTCTCTTAGAGCCAGTATCAATCAATCCTTCCATGAGTGAATGCTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031392 306 - 8458610 tgctgaacttattcatctttcataactgaTGCTAGTC-AAGAGAATGTCCTAGCT-TTCATCTCCTTTACTTCATCCCTGAACGATGAACACAGTAAGTGGCCGTTATCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTCACAGTCTCAAAAGTTGGCATCTGTCATGGAAATCCACATTGTTAGCTCATCAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGGCCCAGGTCCCCGACTTTTCAATTTCTCTCAGAGCCAGTATCAATCAATCCTCACATGAATGAATGCTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64964901 306 + 75148670 tgctgaacttactcatctttcataactgaTGCTAGTC-AAGAGAATGTCCTAGCT-TTCGTCTCCTTTACTTCACCCCTGAACGATGATCACAGTAAGTGGCCGTTATCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTCACAGTCTCAGAAGTTGGCATCTGTCATGGAAATCCACATTGTTAGCTCATCAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGCCCCAAGAAGGTGACCCAGGTCCCCGACTTTTCAATTTCTCTCAGAGCCAGTATCAATCAATCCTTACATGAGTGAATGCTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222253 306 + 4244037 tgatgaacttatttatctttcataactgaTGCTAGTC-AAGAGAATATCCTAGTT-TTCATATCCTTTACTTCACCCCTGAACGATGATCACAGTAAGCGGCCGTTATCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTTGCAGTATCAAAAGTTGGCATCTGTCATGGAAATCCACACTGTTAGCTCATCAGAGGTATTTCCACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGGTCCCCGACTTTTCAATTTCTCTCCGAGTCAGCATCAATCAATCCTCACATGAGTGAATGCTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2241445 307 + 4569836 tgctgaactgattcatctttcataactgaTGCTGGTCAAAGAGAATGTCCTAGTT-TTCATCTCCTTTACCTCATCCCTGAACAATAATCACAGTAAGCGGCCGTTGTCTCTTAGCCAAGTCTTCAGAGCA-TCTAGATTCACAGTCTCAGAAGTTGGCATCTGCCATGGAAATCTACTTTGTTAGCTCATCAGAGGTATTTCCACCACTCCCATGCTAGTAGGAGGTCCCAAGAAGGTGACTCAGGTCCCCAAACTTTATATTTCTCTGAGAGCCAGTATCAATCAATCCTTCCATGAGTGAATGCTT i colAng1.NW_012122154v1 I 7632 C 0 s saiBol1.JH378271 1872886 308 + 3513951 tgcagaagttacttatcttgcaaaactgaTGGTGGTCAAA-AGAATGTGATAGTTCTTCACCTTTTTTACCCCATCACACAATGACTATCACAGTCAGTGACCTTTGTCTGTTAGCTGAGTGTTCAGAGCATTCTAGATACACCACCTCAGAAGTTGGCATCTGTCTTGGAAACCTACATTGTTAGCTCATTAGAGGTATTTTTACCCGTCCCACGCTGGTAGGAGGTCACAAGATGGTGGCCCAGGTCCCTAACTTTTCTAATTCTCTTAGGGACAGTACCAATCAATTCTTCCATGACTGAATACTT i saiBol1.JH378271 C 0 T 6282 s cebCap1.NW_016107543v1 20682 308 - 4077172 tgctgagcttattcatcttgcgtagctaaTGTTAATCAAAGAGAATAGCCTAGTT-TTCATCTCCTTTACTTCATCACTGAACGTTGATCACAGTAACTGGCCTTTGTCTGTTAGCCAAGTCTTCAGAGCATTCTAGATTCGCAGTATCAGAAGCTGGCATCTGTCATGGAAATCTACATTGGTAGCTCATCAGATATATTTCTACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGTGACCCAGATCCCCGACTTTTCTATTTCTCTCAGAGCCATGATTAATCAATCCTTCCATAAGTGAATGCTT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14502 307 - 94492 tgctgagctta-ttatcttgcatagctgaTGTCAGTCAAAGAGAATGTCCTAGTT-CTTATCTCATTTACTTCATCACTAAACGATGATCACAGTAAGCGGCCTTTGTCTCTTAGCCAAGTCTTCAGAGCATTCTAGATTCACAGTCTCAGAAGCTGGCATCTGTCATGGAAATCTACACTGGTAGCTCATCAGAGGTATTTCTACCACTCCCATGCTGGTAGGAGGTCCCAAGAAGGCGACCCAGGTCCCCGACTTTTCTATTTCACTCAGGGCCATGATTAATCAGTCCTTCCATAAGTGAATGCTT i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=321383.000000 s hg38.chr17_JH159148v1_alt 61022 42 + 88070 AGCTTG---AATCAGTTCAGGACCCGAAGCAAAAACC-TCTGTCTA s panTro5.chr17 16372167 42 + 83181570 AGCTTG---CACCAGTTCAGAACCAAAAGCACCAACC-TCTGTCTA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16277197 42 + 83442489 AGCTTG---AATCAGTTCAGGACCCGAAGCACCAACC-TCTGTCTA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4123997 42 + 4267968 ATCTTA---CATCAGTTCAGGACCTGAAGCACCAACC-TCTGTCTA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2113958 42 - 2193130 AGCTTG---CGTCAATTCAGGACCAAAAGCACCAACC-TCTGTCTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30173973 42 - 77216781 AACTTG---CATCAGTTCAGGACCAAAAGCACCAACC-TCTGTCTA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28084283 42 - 80997621 AACTTG---CATCAGTTCAGGACCAAAAGCACCAACC-TCTGTCTA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130708 42 + 10377808 AACTTG---CATCAGTTCAGGACCAAAAGCACCAACC-TCTGTCTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031698 42 - 8458610 ATCTTA---CATCAGTTCAGGACCCGAAGCACCAACC-TCTGTCTA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965207 42 + 75148670 ATCTTA---CATCAGTTCAGGACCCGGAGCACCAACC-TCTGTCTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222559 42 + 4244037 ATCTTA---CATCAGTTCAGGACCCGAAGCACCAACC-TCTGTCTA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2241752 42 + 4569836 AACTTG---CATCAGTTCAGGACCAAAAGCACCAACC-TCTGTCTA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866912 46 + 3513951 CCATTGTATCATCAGTTCAGGAACAAAAGTACCAGTCTTCCATCTA i saiBol1.JH378271 T 6282 I 18618 s cebCap1.NW_016107543v1 20990 42 - 4077172 AGCTTG---CATCAGCTCAGGACCAAAAGCACCAATC-TCTGTCTA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14809 42 - 94492 AGCTCG---CATCAGCTCAGGACCGAAAGCACCAACC-TCTGTCTA i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I a score=24705.000000 s hg38.chr17_JH159148v1_alt 61064 5 + 88070 TCATG s panPan2.chr17 16277239 5 + 83442489 TCATG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124039 5 + 4267968 TTATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114000 5 - 2193130 TCATG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174015 5 - 77216781 TCATG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28084325 5 - 80997621 TCATG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130750 5 + 10377808 TCATG i macNem1.NW_012014910v1 C 0 C 0 s colAng1.NW_012122154v1 2241794 5 + 4569836 TCATG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1885576 5 + 3513951 TCATG i saiBol1.JH378271 I 18618 C 0 s cebCap1.NW_016107543v1 21032 5 - 4077172 TCATG i cebCap1.NW_016107543v1 C 0 I 2 s aotNan1.NW_018505111v1 14851 5 - 94492 TCATG i aotNan1.NW_018505111v1 C 0 I 2 e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e panTro5.chr17 16372209 0 + 83181570 C a score=14471.000000 s hg38.chr17_JH159148v1_alt 61069 5 + 88070 ACTTC s panPan2.chr17 16277244 5 + 83442489 ACTTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124044 5 + 4267968 TCTTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114005 5 - 2193130 ACTTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174020 5 - 77216781 ACTTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28084330 5 - 80997621 ACTTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2130755 5 + 10377808 ACTTC i macNem1.NW_012014910v1 C 0 C 0 s colAng1.NW_012122154v1 2241799 5 + 4569836 ACTTC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1885581 5 + 3513951 GCTTC i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e panTro5.chr17 16372209 0 + 83181570 C a score=2548.000000 s hg38.chr17_JH159148v1_alt 61074 1 + 88070 T s panPan2.chr17 16277249 1 + 83442489 T i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114010 1 - 2193130 T i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174025 1 - 77216781 T i rheMac8.chr16 C 0 I 358 s macFas5.chr16 28084335 1 - 80997621 T i macFas5.chr16 C 0 I 65 s macNem1.NW_012014910v1 2130760 1 + 10377808 T i macNem1.NW_012014910v1 C 0 T 9502 s colAng1.NW_012122154v1 2241804 1 + 4569836 T i colAng1.NW_012122154v1 C 0 T 19716 s saiBol1.JH378271 1885586 1 + 3513951 T i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=476.000000 s hg38.chr17_JH159148v1_alt 61075 1 + 88070 G s panPan2.chr17 16277250 1 + 83442489 G i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114011 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 T 9498 s macFas5.chr16 28084401 1 - 80997621 G i macFas5.chr16 I 65 C 0 s saiBol1.JH378271 1885587 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2241805 19716 + 4569836 T e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e macNem1.NW_012014910v1 2130761 9502 + 10377808 T e rheMac8.chr16 30174026 358 - 77216781 I e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=5438.000000 s hg38.chr17_JH159148v1_alt 61076 29 + 88070 -----------TTTCTTTTTTTTTTC-TTTCtttttttttt s panPan2.chr17 16277251 23 + 83442489 -----------TTTCTTTttttt-------ctttttttttt i panPan2.chr17 C 0 C 0 s macFas5.chr16 28084402 30 - 80997621 -----------TTTCTTGtttttttcttttctttttttctt i macFas5.chr16 C 0 C 0 s saiBol1.JH378271 1885588 40 + 3513951 TGAATGCACAAGTTCTACTTTTCTCC-TTTCTTATGTTCTT i saiBol1.JH378271 C 0 T 18670 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e colAng1.NW_012122154v1 2241805 19716 + 4569836 T e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e macNem1.NW_012014910v1 2130761 9502 + 10377808 T e rheMac8.chr16 30174026 358 - 77216781 I e nomLeu3.chrUn_GL397460_1 2114012 9498 - 2193130 T e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=-558.000000 s hg38.chr17_JH159148v1_alt 61105 3 + 88070 tct s panPan2.chr17 16277274 2 + 83442489 tt- i panPan2.chr17 C 0 C 0 s macFas5.chr16 28084432 2 - 80997621 tt- i macFas5.chr16 C 0 I 252 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e saiBol1.JH378271 1885628 18670 + 3513951 T e colAng1.NW_012122154v1 2241805 19716 + 4569836 T e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e macNem1.NW_012014910v1 2130761 9502 + 10377808 T e rheMac8.chr16 30174026 358 - 77216781 I e nomLeu3.chrUn_GL397460_1 2114012 9498 - 2193130 T e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=219358.000000 s hg38.chr17_JH159148v1_alt 61108 2429 + 88070 ttcactttaagttctagggtacatgtgcacaatgtgcaggtttgttacatatgtatacgtgcaccataatggtgtgctgcacccattaactcgttatttacattagatatatctcctaatgctatccctccccactcccctcaccccataataggccccggtgtgtgatgttccccttcctgcgtccaacggttctcattgttcaattgccacctatgactgagaatgtgtggtgtttggttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggctgcatagtattctgtggtgtatatgtgtcacattttcttaatcccatctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttgtagatccttgaggaatcaccacaccgtcttccacaatggttaaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatagccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgtcttttggctgcataaatgtcttcttttgagaagtgtctgtttatatccttcatccagtttttgatgggatggtttgtttttttcttgtaaatttgtttgagttctttgtagattctggatatttgccctttgtcagatgagtagatttcaaaaattttctcccattctgtaggctgcctgttcactctgatggtagtttcttttgctgtgcagaagttctttagtttaattagatcccatttgtcaattttggcttttattgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaacatttaagtctttaatccatcttaaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacgtatgactagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatacctctgttttggtaccagtaccatgatgtttttgttactatagccttttagtatagttttaagttaggtagcatgatgactccagctttgttcttttggcttaggagtgtcttggcaatgcaggcccttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagcttaatgggaatggcattgaatctatgaattaccctgggcagtatggccattttcatgatattgattcttcctatccatgagcatgggatgttcttccatttgtttgtgtcctcttttatttcattgagcagaggtttgtagttctccttgaagaggtccttcacgtcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttccttcatgatttggctctctctttgtctgttattggtgtataacaatgcttgtgatttttgcactttgattttatatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagatgatggggttttctaaatatacaatcatgtcacctgcaaacagggacaatttgacttcctcttttcctaattgaataccatttatttctttctcctgcctgattgccctggccagaacttccaacact--gttgaataggagtggtgagagagggcatccctgtcttgtgccggttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatcgtcccatcaatacctaatttattgagagtttttagcatgaggagttgttgaattttgtcaaaggccttttctgcatctattgagatatcacgtggttttgtctttggttctgcttatatgctggattatgtttattgatttgcatatgttgaaccagccttgcatcccagggatgaagcccactttatcatgttggatcagctttttgatgtgctgctgaattcagtttgccagtattttaatgaggatttttgcatcaatgttcatcagggatat s panPan2.chr17 16277276 2427 + 83442489 ---actttaagttctagggtacatgtgcacaatgtgcagttttgttacatatgtatacgtgcaccatgatggtgtgctgcacccattaactcgttatttacattagatatatctcctaatgctatccctccccactcccctcaccccatcacaggccccggtgtgtgatgttccccttcctgcgtccaacggttctcattgttcaattgccacctatgagtgagaacgtgtggtgtttggttttttgtccttgcgatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatccttttttatggctgcatagtattccgtggtgtatatgtgtcacattttcttaatcccatctatcattgatggacatttgggttggttccaagtctttgctattgtgaataatgccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatcaccacactgtcttctacaatggttaaactagtttacagtcccatcaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcgccattctaattggtgtgagatggtatctcattgtggttttgatttgcgtttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgtttatatccttcatccactttttgatgggatggtttgtttttt-ctcgtaaatttgtttgagttctttgtagattctggatattcgccctttgtcagatgagtagatttcaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatctcatttgtcaattttggcttttattgccattgcttttggtgttttagacgtgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaacatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagttttctacatatggctagccagttttcctagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatacctctgttttggtaccagtaccatgatgttttggttactatagccttgtagtatagttttaagttaggtagcatgatgcctccagctttgttcttttggcttaggattgtcttggcaatgcgggcccttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagcttaatgggaatggcattgaatctatgaattaccctgtgctgtatggccattttcatgatattgattcttcctatccatgagtatgggatgttcttccatttgtttgtgtcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtctttcacgtcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttccttcatgatttggctctctgtttgtctgttattggtgtataacaatgcttgtgatttttgcacattgattttatatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacaatggggttttctaaatatacaatcatgtcatctgcaaacagggactatttgactttctcttttcctaattgaataccctttatttctttctcctgcctgattgccctggccagaacttaaaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatcgtctcatcaatacctaatttattgagagtttttagcatgaagagttgttgaattttgtcaaaggccttttctgcatctattgagatatcatgtggttttgtctttggttctgcttatacgctggattatgtttattgatttgcgtatgttgaaccagccttgcatcccagggatgaagcccactttatcatgttggatcagctttttgatgtgctgctgaattcagtttgccagtattttaatgaggatttttgcatcaatgttcatcagggatat i panPan2.chr17 C 0 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e saiBol1.JH378271 1885628 18670 + 3513951 T e colAng1.NW_012122154v1 2241805 19716 + 4569836 T e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e macNem1.NW_012014910v1 2130761 9502 + 10377808 T e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I e nomLeu3.chrUn_GL397460_1 2114012 9498 - 2193130 T e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=957321.000000 s hg38.chr17_JH159148v1_alt 63537 3637 + 88070 tggtcgaaaattctctttttttgttgtgtctctgccaggctttggtatcaggatgatgctggcctcataaaatgagttagggaggagtccctctttttctattgattataatagtttcagaagaaatggtaccagctcctccttgtacctctggtagaatttggctgtgaatccgtctgctcctggacttttttttggttggtaggctattaattattgcctcaatttcagagcctgttattggtctattcagggattcagcttcttcctggtttagtctttattcatttcttcaagattttctagtttatttgcatagaggtgtttatagtattctctgatggtagtctgtatttctgtgggattggtggtgatatcccatttatcattttttattgcgtctatttgattcttctctcttttcttctttattagtcttgctaacggtctatcaattttgttgatcttttcaaaaaaccagcgactggattcattgattttttgaagggtttttcatgtctctatttccttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgattgctcttgcttctctagttcttttaattgtgatgttagggtgtcaattttagatctttcctgctttgtcttgtgggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcatttgtttcaaagaatatctttatttctgccttcattttgttatgtacccagtagtcattcaggagcaggttgttcagttttcatgtaactgagtggttttgagtgagtttctaaatcctcagttctagtttgattgcaccgttgtctgagagacagtttgttataatttctcttctcttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataagtgtgatgtggtgctgagaagaatgtatattctgttgatttggggtggagagctctgtagatgtctatgaggtccgtttggcgtagagctgagttcaatttctagatatccttgttaacttcctgtctcgttgatctgtctaatgttgacagtggggtgttacattctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattgggtgcttatatatttaggatagttagctattcttgttgagttgatccctttaccattatgcaatggccttctttgtctctttttatctttgttgatttaaagtcagttttatcacagactacaattgcaaaccctcctttttttt----ttccatttgcttggtagatcttcctccatccctttattttgagcatatgtgtgtctctgtatgggagatgggtctcctgaatacagcacactgatgggtcttgactctttatccaatttgccagtctgtgtctttcaactggagcatttagcccatttacacttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatgttagctggttattttgctcgttagttgatgcagtttcttcctagcattgacagcctttacaatttggcatgtttttgcagtggctggtaccagttgttcctttctatgtttagtgcttccttcaggagctcttgtaaggcaggcctggtggtgacaaaatctctcagcatttgcctgtctgtaaagtattttatttctccttcacttatgaagcttagtttggctggatatgaaattctgggttgaaaattcttttctttaagaatgttgaatattggcccccactctcttctggcttgtagagtttctgccgagagatctgctgttagtctgatgggcttccctttgtgggtaacccgacgtttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcgaggagtatctttgtggtgttctctgtatttcctgaatttgaatattcgcctgtcttgctaggttggggaagttctcctcgataatatcctgcagagtgttttccaactcggtttcattctccccgtcactttcaggtacaccaatcagatgtagatttggtcttttcagatagtcccatatttcttggaggctttgttcctttctttttactcttttttctctaaacttctcttctctcttcatttcattcctgtgatcttcaatcactgataccctttcttccagttgattgaatttgctactgaagcttgtgcattcgtcacgtagttctcatgccatggttttcagctccatcaggtcatttaaggacttctctacactggttattttagttagccatttgtctaatcttttttcaaggtttttagcttctttgcaatgggttcgaacttcctcttttagcttggagaagtttgttcatctgaagccttcttctctcaactcatcaaagtcattctccatccagctttgttccgttgctggcaaggagctgtgctcctctggaaggtgagaggcac-ctgatttttagaattttcagcttttctgctctgtttctccccatctttgtgattttatctacctttggtctttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccttctaacagtcaggaccctcagctgcaggtctgttggagtttgctgaaggtccactccagaccctgtttgcctgggtatcggcagcggaggctgcagaacagcgaatattgctgaacagtaaatgttgctgcctgatcatttctctgg-agcttcatctcagaggggtatctggccatgtgaggtctcagactgcccctactggagggtgtctcccagttaggctacttgggggtcagggacccacttgaggaggcagtctgtctgttctcagatctcaaactgtgtgctaggagaaccactactctcttcaaagctgtcagac-gggacatttaagtctgcagaggtttctgctgccttttgtttggctatgccctgccccagaggtggagtctacagtggcaggcaggcctccttgagctgtggtgggctccacccagttcgagcttcctggccacttt----atctactcaagcctcagccatggcaggcgcccctcccccagcctcactgccaccttgcagttcgatctcagactgctgtgctaacaatgagagaggctctgtgggcgtggg-ctctctgagccaggcatgggacataatctcctggtgtgccgtttgtaagaccattggaaaagggcagtattagggtgtgagtgacccagttttccaggtgccatctgtcacagcttcccccgactccttgcaattcctgggtgaggcaatgcctcgccctgctttggctcatgctcagtgggctgcacccactgtcctgcacccactgtccaacaagccccagtgagatgaacccggtacctcagttggaaatgcagaaatcaaccatcttctgcgtcactcatgctgggagctgtagactggagctgttcccattcagccaccttggaa s panPan2.chr17 16279703 3646 + 83442489 tggtctaaaattctctttttttgttgtgtctctgccaggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctcttcttctattgattataatagtttcagaagaaatggtaccagctcctccttgtacctctggtagaatttggctgtgaatccgtctgctcctggacttttttttggttggtaggctattaattattgcctcaatttcagagcctgttattggtctattcagggattcagcttcttcctggtttagtctttatccatttcttcaagattttctagtttatttgcatagaggtgtttatagtattctctgatggtagtttgtatttctgtgggattggtgatgatatcccctttatcattttttattgcgtctatttgattcttctctcttttcttctttatcagtcttgctagcggtctatcaattttgttgatcttttcaaaaaaccagctactggattcattgattttttgaagggttttttgtgtctctatctccttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgattgctcttgcttctctagttcttttaattgcgatgttagggtgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtatgttgtgtctttgttctcattggtttcaaagaatatctttatttctgccttcattttgttatgtacccagtagtcattcaggagcaggttgttcagttttcatgtagctgagtggttttgagtgagtttctaaatcctcagttctagtttgattgcactgttgtctgagagacagtttgttataatttctgttcttttacatttgctgaggagggctttacttccaactatgtggtcaattttggaataagtgtgatgtggtgctgaggagaatgtatattctgttgatttggggtggagagttctgtagatgtctatgaggtccgtttggtgtagagctgagttcaatttctagatatccttgttaacttcctgtctcgtcgatctgtctaatattgacagtggggtgttacattctcccattattattgtgtgggagtctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattgggtgcgtatatatttaggatagttagctattcttgttgagttgatccctttaccattatgcaatggccttctttgtctctttttatctttgttggtttaaagtttgttttatcagagactaggattgcaacccctgctttttttt-gttttccatttgcttggtagatcttcctccatccctttattttgagcctatgtgtgtctctgtatgtgagatgggtctcctgaatacagcacgctgatgggtcttgactctttatccaatttgccagtctgtgtctttcaactggagcatttagcccatttacacttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatgttagctggttattttgctcgttagttgatgcagtttcttcctagcattgacagtctttacaatttggcatgtttttgcagtggctggtaccggttgttcctttctatgtttagtgcttccttcaggagctcttgtaaggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaagtattttatttctccttcacttatgaagcttagtttggctggatatgaaattctgggttgaaaattcttttctttaagaatgttgaatattggcccccactctcttctggcttgtagagtttctgctgagagatctgctgttagtctgatgggcttccctttgtgggtaacccgacgtttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcgaggagtatctttgtggtgttctctgtatttcctgaatttaaatatttgcctgtcttgctatgttggggaagttctcctcgataatatcctgcagagtgttttccaactcggtttcattctccctgtcactttcaggtacatcaattagacgtagatttggtcttttcacatagtcccatatttcttggaggctttgttcctttctttttactcttttttctctaaccttctcttctcacttcatttcattcatttgatcttcaatctctgatatcctttcttccagtcgattgaattggctactgaagcttgtgcattcgtcacgtagttctcatgccatggttttcagctccatcaggtcatttaaggacttctctacactggttattttagttagccatttgtctaatcttttttcaaggtttttagcttctttgcgatgggttcgaacttcctcttttagcttggagaagtttgatcgtctgaagccttcttctctcaactcatcaaagtcattctccgtccagctttgttccattgctggcgaggagctgtgttcctctggaaggtgagaggcactctgatttttagaattttcagcttttctgctctgtttctccccatccttgtggttttatctacctttggtctttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccttctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccactccagaccctgtttgcctgggtattggcagcggaggctgcagaacagcgaatattgctcaacagtaaatgttgctgcctgatcgtttctctgg-agcttcatctcagaggggtatccggccatgtgaggtctcagactgcccctactgcagggtttctcccagttaggctactcgggggtcagggacccacttgaggaggcagtctgtctgttctcagatctcaaactctgtgctgggagaaccactactctcttcaaagctgtcagacagggacatttaagtctgcagaggtttctgctgccttttgttcggctatgccctgccccagaggtggagtctacagcggcaggcaggcctccttgagctgtggtgggctccacccagtttgagcttcctggccactttgtttatctactcaagcctcagccatggcaggcgcccctcccctagcttcactgacaccttgcagttcgatctcagactgctgtgctagcaatgagagaggctctgtgggtgtggg-ctctctgaaccaggcgtgggacataatctcctggtgtgccatttgtaagaccattggaaaagggcagtattagggtgggagtgacccagttttccaggtgccatctgtcacagcttcccccgactccttgcacttcctgggtgaggcaatgcctcgccctgctttggctcatgctcagtgggctgcacccactgtcctgcacccactgtccaacaagccccagtgagatgaactcggtacctcagttggaaatgcagaaatcaaccatcttctgcgtcgctcatgctgggagctgtagactggagctgttcccatttggccaccttggaa i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2104514 3616 - 2193130 tggtctaaaattctctttttttgttgtgtctctgccaggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattataatagtttcagaaggaatggtaccagctcctccttgtacctctggtagaatttggcggtgaatccatctgctcctggac-tttttttggttggtaggctattaattattgcctcaatttcagagtctgttattggtctattcagggattcaacttcttcctggtttagtctttacccatttcttcaagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttctgtgggatcggtggtgatatctcctttatcattttttattgcgtctatttgattcttctctcttttcttctttattagtcttgctagcggtctatcaattttgttgatcttttcaaaaaaccagctcctggattcattgatttcttgaagggcttttcgtgtctctatccccttcagttctgctctggtcttagttatttcttgccttctgctagcttttgaatgtgattgctcttgcttctttagttcttttaattgtgatgttagggtgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttgaatgtgtcccagagattctggtatgttgtgtctttgttcttgttggtttcaaagaacatctttatttctgccttcatttcattatgtacccagtagtcattcaggtgcaggttgttcagtttccatgtagctgagtggttttgagtgagtttcctaatcccgagttct----------------------------agtttgttataatttctgtt-ttttacatttgctgaggagtgctttacttccaactatgtggtcaattttggaataagtgtgatgtggtgctgagaagaatgtatattctgttggtttggggt--agagttctgtagatgtctatgaggtccatttggtgtagagctgagttcaatttctagatatccttgttaactttctgtcttgttgatctgtctaatgttgacagtggggtgttaaaatctcccattattattgtgtgggaatctaagtctctttgtaggtctctaaggacttgctttatgaatctgggtgctcctgtattgggtgcatagatatttaggatagttagctattcttgttgaattgatccctttaccattatgcaatggccttctttgtctcttttgatctttgttggtttaaagtctgttttatcagagactgggattgcaactcttactttttttttgttttccatttgcttggtagatcttcctccatccctttattttgagcctctgtgtgtctctgtatgtgagatgggtctcctgaatacagcacactgatgggtcttgactctttatccaatttgccagtctgtgtctttcaactggagcatttagcccatttacatttaaggtaaatattgttacgtgtgaatttgaccctgtcattatgatgttagctggttattttgctcgttagttgatgcagtttcttcctagcattgatggtctttaaaatttggcatgtttttgcagtggctggtaccggttgttcctttctgtgtttagtgcttccttcaggagctcttgtaaggcgggcctggtggtgacaaaatctctcagcatttgcttgtctgtaaagcattttatttctccttcacttatgaagcttagtttggctggatatgaaattctgggttgaaaattcttttctttaagaatgttgaatattggcccccactctcttctggcttgtagagtttctgccgagagatctgctcttagtctgatggacttccctttgtgggtaacccgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatctgacaattatgtgtcttggagttgctcttctcgaggagtatctttgtggcattctctgtatttcctgaatttgaatatttgccattcttgctaggttggggaagttctcctggaaaatatcctgcagagtgttttccaactt-gtttcattctccccgtcactttcaggtacaccaatcagacgtagatttggtcttttcacatagtcccatatttcttggaggctttgttcctttctttttactcttttttctctaaacttctcttttcacttcatttaattcattcaatcttcaatcactgataccctttcttccagttgattgaatcggctactgaagcttgtgcattcatcacgtagttctcatgccatggttttcagctccatcaggtcatttaaggacttctctacactggttattttagttagtcatttgtctaatcttttttcaaggtttttagcttctttgcagtgggttcgaacttcctcctttagcttggagaagtttgattgtctgaagccttcttctctcaactcatcaaagtcattctccatccagctttgttccattgctggcgaggagctgtgttcctttggaaggagagaggtgctctgatttttagaattttcagcttttctgctctgtttctccccatctttgtggttttatctacctttggtctttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccttctaacagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccaccccagaccctgtttgcctgggtatgagcagcagaggctgcagaacagcaaatattgctgaacagtaaatgttgctgcctgatcgttcctctggaagctttgtctcagaggggtacctggccatgtgaggtctcagactgcccctactggaggatgtctcccagttaggctacttgggggtcagggacccacttgaggaggcagtctgtctgttctcagatctcaaactccgtgctgggagaaccactactctcttcaaagctgtcagacagggacatttaagtctgcagaggtttctgctgccttttgttcggctatgacctgccccagaggtggagtctacagtggcaggcaggcctccttgagctgtggtgggctccacccagttcgagcttcctggccactttgtttatctactcaagcctcagccatggcaggcgcccctcccccagcctcgctgccgccttgcagttcgatctcagactgctctgctggcaatgagcgaggctctgtgggcatgggaccctctgagccaggcgtgggacataatctcctggtgtgccgtttgtaagaccattggaaaagggcagtattagggtgggagtgacccagttttccaggtgccatctgtcacagcttcccctgactccttgcacttcctgggtgaggcaatgccttgtcttgctttggctcatgctcagtgggctgcacccactgtcctgcactcactgtccaataagccccagtgagatgaacccggtacctcagttggaaatgcagaaatcacctatcttctgcatcgctcacgctgggagctgtagactagagctgttcctattcggccaccttggaa i nomLeu3.chrUn_GL397460_1 T 9498 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e dasNov3.JH570468 626574 3664 - 852752 I e otoGar3.GL873537 22862032 5356 + 28711273 I e saiBol1.JH378271 1885628 18670 + 3513951 T e colAng1.NW_012122154v1 2241805 19716 + 4569836 T e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e macNem1.NW_012014910v1 2130761 9502 + 10377808 T e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=2635.000000 s hg38.chr17_JH159148v1_alt 67174 10 + 88070 cttcccccTT s panPan2.chr17 16283349 10 + 83442489 ctgcccccTA i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108130 10 - 2193130 ctgcccccTA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s dasNov3.JH570468 630238 10 - 852752 CTTCTGTCTG i dasNov3.JH570468 I 3664 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e manLeu1.NW_012106252v1 2222601 0 + 4244037 C e otoGar3.GL873537 22862032 5356 + 28711273 I e saiBol1.JH378271 1885628 18670 + 3513951 T e colAng1.NW_012122154v1 2241805 19716 + 4569836 T e chlSab2.chr16 64965249 0 + 75148670 C e cerAty1.NW_012006043v1 2031740 0 - 8458610 C e macNem1.NW_012014910v1 2130761 9502 + 10377808 T e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C e panTro5.chr17 16372209 0 + 83181570 C a score=30540.000000 s hg38.chr17_JH159148v1_alt 67184 7 + 88070 TCATGAC s panTro5.chr17 16372209 7 + 83181570 TCATGAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283359 7 + 83442489 TCATGAC i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108140 7 - 2193130 TCATGAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121259 7 + 10377808 TCATGAC i macNem1.NW_012014910v1 T 9502 C 0 s cerAty1.NW_012006043v1 2031740 7 - 8458610 TCATGAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965249 7 + 75148670 TCATGAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222601 7 + 4244037 TCATGAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2222089 7 + 4569836 TCATGAC i colAng1.NW_012122154v1 T 19716 C 0 s saiBol1.JH378271 1866958 7 + 3513951 TCGTGTC i saiBol1.JH378271 T 18670 C 0 s dasNov3.JH570468 630248 7 - 852752 TCATAAC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 14856 2 - 94492 I e cebCap1.NW_016107543v1 21037 2 - 4077172 I e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C a score=15384.000000 s hg38.chr17_JH159148v1_alt 67191 3 + 88070 TTC- s panTro5.chr17 16372216 3 + 83181570 TTC- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283366 3 + 83442489 TTC- i panPan2.chr17 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108147 3 - 2193130 TTC- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macNem1.NW_012014910v1 2121266 3 + 10377808 TTC- i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031747 3 - 8458610 TTC- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965256 3 + 75148670 TTC- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222608 3 + 4244037 TTC- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2222096 3 + 4569836 TTC- i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866965 3 + 3513951 TTC- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21039 3 - 4077172 TTC- i cebCap1.NW_016107543v1 I 2 C 0 s aotNan1.NW_018505111v1 14858 3 - 94492 TTC- i aotNan1.NW_018505111v1 I 2 C 0 s dasNov3.JH570468 630255 3 - 852752 -TCT i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I e gorGor5.CYUI01015385v1 4124049 0 + 4267968 C a score=12422.000000 s hg38.chr17_JH159148v1_alt 67194 2 + 88070 TA s panTro5.chr17 16372219 2 + 83181570 TA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283369 2 + 83442489 TA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124049 2 + 4267968 TA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2108150 2 - 2193130 TA i nomLeu3.chrUn_GL397460_1 C 0 I 5860 s macNem1.NW_012014910v1 2121269 2 + 10377808 TA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031750 2 - 8458610 TA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965259 2 + 75148670 TA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222611 2 + 4244037 TA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2222099 2 + 4569836 TA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866968 2 + 3513951 CA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21042 2 - 4077172 TA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14861 2 - 94492 TA i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630258 2 - 852752 GA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I a score=336087.000000 s hg38.chr17_JH159148v1_alt 67196 57 + 88070 TGAATGCAGAAG---------TTCTACTTTGCTCCTTTCTTACATTATGTTGATTTCCCTGAAAAC s panTro5.chr17 16372221 57 + 83181570 TGAATGCACATG---------TTCTACTTTGCTCCTTTCTTACATTCTTCCGATTTCCCTGCAAAC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283371 57 + 83442489 TGAATGCAGAAG---------TTCTACTTTGCTCCTTTCTTACATTATTTTGATTTCCTTGAAAAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124051 57 + 4267968 TGAATGCACAAG---------TTCTACCTTGCTCCTTTCTTACATTCTTCTGATTTCCGTGGAAAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114012 57 - 2193130 TGAATGCATATG---------TTCTACTTTGCTCCTTTCTTACGTTCTTCTGAGTTCCCTGGAAAC i nomLeu3.chrUn_GL397460_1 I 5860 C 0 s macNem1.NW_012014910v1 2121271 57 + 10377808 TGAAGGCACAAG---------TTCTACTTTGCTCCTTTCTTGCCTTCTTCTGATTTCCCTGGAAAC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031752 57 - 8458610 TGAAGGCACAAG---------TTCTACTTTGCTCCTTTCTTGCCTTCTTCTGATTTCCCTGGAAAC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965261 57 + 75148670 TGAAGGCACAAG---------TTCTACTTTGCTCCTTTCTTACCTTCTTCTGATTTCCCTGGAAAC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222613 57 + 4244037 TGAAGGCACAAG---------TTCTACTTTGCTCCTTTCTTACCTTCTTCTGATTTCCCTGGAAAC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2222101 57 + 4569836 TGAAGGCACAAG---------TTCTACTTTGCTCCTTTCTTACCTTCTTCTGATTTCCCTGGAAGC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1866970 66 + 3513951 CGGATGAAAAAGAAAAAGTTCTGCCACTTTTCCTATTTCTTAAATTCTACTGATTTCCCTGGAAAT i saiBol1.JH378271 C 0 I 18609 s cebCap1.NW_016107543v1 21044 57 - 4077172 AGAATGCACAAG---------TTCTACTTTTCTCCTTTCTTACATTCTTCTGATTTCCCTGAAAAC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14863 57 - 94492 TGAATGCACAAG---------TTCTGCTTTTCTCTTTTCTTACATTCTTCTGATTTCCCTGGAAAC i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630260 57 - 852752 TGAATGCACAGT---------TTTTTCTACATTTTCTCCTCAAATATATCTGTTCCCCATGCAAAC i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I a score=7796.000000 s hg38.chr17_JH159148v1_alt 67253 3 + 88070 ACA s panTro5.chr17 16372278 3 + 83181570 ACC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283428 3 + 83442489 ACA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124108 3 + 4267968 AGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114069 3 - 2193130 ACA i nomLeu3.chrUn_GL397460_1 C 0 I 5 s macNem1.NW_012014910v1 2121328 3 + 10377808 AAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2031809 3 - 8458610 ACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965318 3 + 75148670 AAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222670 3 + 4244037 ACA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2222158 3 + 4569836 AAA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1885645 3 + 3513951 ACG i saiBol1.JH378271 I 18609 C 0 s cebCap1.NW_016107543v1 21101 3 - 4077172 ACA i cebCap1.NW_016107543v1 C 0 C 0 s dasNov3.JH570468 630317 3 - 852752 ATG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 14920 0 - 94492 C e otoGar3.GL873537 22862032 5356 + 28711273 I e macFas5.chr16 28084434 252 - 80997621 I e rheMac8.chr16 30174026 358 - 77216781 I a score=37692.000000 s hg38.chr17_JH159148v1_alt 67256 8 + 88070 AGTTTTTC s panTro5.chr17 16372281 7 + 83181570 -GTTTTCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283431 8 + 83442489 AGTTTTTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124111 8 + 4267968 AGTTTTTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114077 8 - 2193130 AGTTTTTA i nomLeu3.chrUn_GL397460_1 I 5 C 0 s macFas5.chr16 28084686 8 - 80997621 aGTTTTCA i macFas5.chr16 I 252 C 0 s macNem1.NW_012014910v1 2121331 8 + 10377808 AGTTTTTT i macNem1.NW_012014910v1 C 0 I 9780 s cerAty1.NW_012006043v1 2031812 8 - 8458610 AGTTTTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64965321 8 + 75148670 AGTTTTTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222673 8 + 4244037 AGTTTTTT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2222161 8 + 4569836 AGTTTTTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1885648 8 + 3513951 AGATTTTA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21104 8 - 4077172 AGATTTTA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14920 3 - 94492 -----ACA i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630320 8 - 852752 AACTTTTA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I e rheMac8.chr16 30174026 358 - 77216781 I a score=237422.000000 s hg38.chr17_JH159148v1_alt 67264 28 + 88070 GTTTCTTTAGATGGTTCATATTATCCTC s panTro5.chr17 16372288 28 + 83181570 GTTTCTTTAGATGCCTCATATTGGTCTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283439 28 + 83442489 ATTTCTTTAGATGGTTCATATTATCCTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124119 28 + 4267968 ATTTCTTTAGATTCTTCATATTGGCCTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114085 28 - 2193130 GTTTCTTTAGATGCCTCGTATTGGTCTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174384 28 - 77216781 GTTTCTTTAGATGCCTCATATTGGTCTT i rheMac8.chr16 I 358 I 2 s macFas5.chr16 28084694 28 - 80997621 GTTTCTTTAGATGCCTCATATTGGTCTT i macFas5.chr16 C 0 I 2 s macNem1.NW_012014910v1 2131119 28 + 10377808 GTTTCTTTAGATGCCTCATATTGGTCTT i macNem1.NW_012014910v1 I 9780 I 2 s cerAty1.NW_012006043v1 2031820 28 - 8458610 GTTTCTTTAGATGCTTCATATTGGCCTC i cerAty1.NW_012006043v1 C 0 I 6074 s chlSab2.chr16 64965329 28 + 75148670 GTTTCTTTAGATGCTTCATATTGGCCTC i chlSab2.chr16 C 0 I 5882 s manLeu1.NW_012106252v1 2222681 28 + 4244037 GTTTCTTTAGATGCTTCATATTGGCCTC i manLeu1.NW_012106252v1 C 0 I 2 s colAng1.NW_012122154v1 2222169 28 + 4569836 GTTTCTTTAGATGCTTCATATTGGCCTC i colAng1.NW_012122154v1 C 0 I 2 s saiBol1.JH378271 1885656 28 + 3513951 GTTTCTGTAGTTGCTTCATGTTGGTCTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21112 28 - 4077172 GTTTCTTTGGATGCTTCATGTTGGCCTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14923 28 - 94492 GTTTCTTTAGATGCTTCATGTTGGCCTC i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630328 28 - 852752 TTTCCCTCAGATACTTCCTTTTTACCTC i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=14006.000000 s hg38.chr17_JH159148v1_alt 67292 6 + 88070 -AAAAAC s panTro5.chr17 16372316 6 + 83181570 -ACAAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283467 6 + 83442489 -AAAAAC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124147 6 + 4267968 -ACAAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114113 6 - 2193130 -ACAAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174414 4 - 77216781 ---AAAA i rheMac8.chr16 I 2 C 0 s macFas5.chr16 28084724 4 - 80997621 ---AAAA i macFas5.chr16 I 2 C 0 s macNem1.NW_012014910v1 2131149 4 + 10377808 ---AAAA i macNem1.NW_012014910v1 I 2 C 0 s cerAty1.NW_012006043v1 2037922 4 - 8458610 ---AAAA i cerAty1.NW_012006043v1 I 6074 C 0 s chlSab2.chr16 64971239 4 + 75148670 ---AAAA i chlSab2.chr16 I 5882 C 0 s manLeu1.NW_012106252v1 2222711 4 + 4244037 ---AAAA i manLeu1.NW_012106252v1 I 2 C 0 s colAng1.NW_012122154v1 2222199 4 + 4569836 ---AAAA i colAng1.NW_012122154v1 I 2 I 20011 s saiBol1.JH378271 1885684 6 + 3513951 -ACAAAA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21140 6 - 4077172 -ACAAAA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14951 6 - 94492 -ACAAAA i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630356 7 - 852752 AAGAAAA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=16037.000000 s hg38.chr17_JH159148v1_alt 67298 2 + 88070 TG s panTro5.chr17 16372322 2 + 83181570 TT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283473 2 + 83442489 TG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124153 2 + 4267968 TG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114119 2 - 2193130 TG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174418 2 - 77216781 TG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28084728 2 - 80997621 TG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131153 2 + 10377808 TG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2037926 2 - 8458610 TG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971243 2 + 75148670 TG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222715 2 + 4244037 TG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242214 2 + 4569836 TG i colAng1.NW_012122154v1 I 20011 C 0 s saiBol1.JH378271 1885690 2 + 3513951 TG i saiBol1.JH378271 C 0 T 18656 s cebCap1.NW_016107543v1 21146 2 - 4077172 TG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14957 2 - 94492 TG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630363 2 - 852752 CA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=466815.000000 s hg38.chr17_JH159148v1_alt 67300 62 + 88070 CAGAAGGTTGTTTCATTCCCTTCCTTCTCATAGAGATAATGGATTGTGCCAAGTCTTACATG s panTro5.chr17 16372324 62 + 83181570 CAGAAGGTTCTTTCATTCCCTTCCTTGGTTTAGAGATTATGGATTGTGCCACGTCTTACATA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283475 62 + 83442489 CAGAAGGTTGTTTCATTCCCTTCCTTCTCACAGAGATAATGGATTGTGCCAAGTCTTACATG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124155 62 + 4267968 TGGAAGGTTGTTTTATTCCCTTCCTTAGCTCAGAGATTATGGGTTGTGCCAAGTCTTACATG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114121 62 - 2193130 AAGAAGGTTCTTTCATTCCCTTCCTTGGTTCAGAGATTATGGATTGTGCCAAGTCTTACATA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174420 62 - 77216781 CAGAAGGTTATTTCATTCCCTTCCTTGGTTCAGAGATTATGGATTGTGTCAAGTCTTACATA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28084730 62 - 80997621 CAGAAGGTTATTTCATTCCCTTCCTTGGTTCAGAGATTATGGATTGTGTCAAGTCTTACATA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131155 62 + 10377808 CAGAAGGTTATTTCATTCCCTTCCTTGGTTCAGAGATTATGGATTGTGTCAAGTCTTACATA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2037928 62 - 8458610 CAGAAGGTTATTTCGTTCCCTTCCTTGGTTCAGAGATTACGGATTGTGTCAAGTCTTACATA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971245 62 + 75148670 CAGAAGGTTATTTCATTCCCTTCCTTGGTTCAGAGATTATGGATTGTGTCAAGTCTTACATA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222717 60 + 4244037 T-GAAGGTTGTTTTATTCCC-TCCTCGGCTCAGAGATTACGGATTGTGCCAAGTCGTACACG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242216 62 + 4569836 CAGAAGGTTATTTCATTCCCTTCCTTGGTTCAGAGATTAAGGATTGTGTCAAGTCTTACATA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1867036 33 + 3513951 CAGA-----------------------------AGATTATGGTTTGTGCAAAGCCATACATG i saiBol1.JH378271 T 18656 I 18679 s cebCap1.NW_016107543v1 21148 62 - 4077172 CAGACGGTTGTTTTATTCCCTTCCTTGGCTCAGAGATTATGGATTGTGCCAAGTCTTACATG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 14959 62 - 94492 CAGAAGGTTGTTTTATTCCCTTCCTTGGCTCAGAGATCATGGATTGTGCCAAGTCTTACACG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630365 62 - 852752 GAGGTGGTGGTTTAGTTTCCTTAGATGGTGTAGAGATTGTGAATAGATCAAAGTCACACATG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=2649337.000000 s hg38.chr17_JH159148v1_alt 67362 329 + 88070 CCCATTGCACACTTTCTCAATTCCCAGCTTTGTTC-TTACTTAATTTTCCTCATAACGTCTCAATTATGGGACAAATTTTC------TTAATGTGGCATAAGGTACAGTCTGTGTTTTACAAGGAATAACTTAGTTTCATTTACTTCGTCAATAGGTGTTCAGGAGATGGAGGCCATATAACAATTTTATTTACATGATATCGA-GAATAAGTTCCTTCAGATGAGACTCTCTC--ATGAGTCCACAATGAATTCTCAAGCAT-TTTTTGATGCAGATGAATTGAATGAATGACTGGTCAGAGGATGAGACAAAAAGAGATCCCTGCTTTCAGGGCAGCC s panTro5.chr17 16372386 331 + 83181570 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGGGACAAATTCTC------TTAATGTGGCATAAGGTGTGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTGACTTTGTCAACAGGTATTCAGGAGGGGGAGGCCGTGTAAGAATTTTATTTACATCATACTGA-GAATAAGTCACTTCAGATGAGACTCTCTCTTATGATGATATGATGAATTCTCAAGCATCTTTTTGATGCGTATGAGTTGAATGATTGGCTGGTCAGAGGCTGAGACAAAAAGA--TCCCTGCATTCAGGGCAGCC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283537 329 + 83442489 CCCATTGCACACTTTCTCAATTCCCAGCTTTGTTC-TTACTTAATTTTCCTCATAACGTTTCAATTATGGGACAAATTTTC------TTAATGTGGCATAAGGTACAGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTCGTCAATAGGTGTTCAGGAGATAGAGGCTACATAACAATTTTATTTACATGATATCGA-GAATAAGTTCCTTCAGATGAGACTCTCTC--ATGAGTCCACAATGAATTCTCAAGCAT-TTTTTGATGCAGATGAATTGAATGAATGGCTGGTCAGAGGATGAGACAAAAAGAGATCCCTGCTTTCAGGGCAGCC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4124217 328 + 4267968 CCCATTGCATAGTTTCTCAATTCCCAGCTTTGTTC-TTACATAATTTTACTCATAACACTTCAAGTA-GGGACAAATTGTC------TTAACGTGGCATAATGTATGGTGTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTTGTCAATAGGTATTCAGGAGACCGATGCTGTATAAGAATTTTATTTGCATCACACTGA-GAATAAGTTTCTTCAGATGAGGCTCTATCTCCTGAGTCCACAATAAATTCTCAAGCAT-TTTTTGATGCAGATGAATTGAATGAATGGCTGGTCAGAGGCTCAGACAAAAAGA--TCTCTGCATTCAGGGCAGCC i gorGor5.CYUI01015385v1 C 0 I 5769 s nomLeu3.chrUn_GL397460_1 2114183 331 - 2193130 CCCATTGCATACTTTCTCAATTCCCAGCTTTATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGGGACAAATTGTC------TTAATGTGGCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTTCTTTTTCAATAGGTATTCAGGAGAGGGAGGCCGTGTAAGAATTTTATTTACATCATACTGA-GAATAAGTCACTTCAGATGAGACTCTCTCTTATGATGATATAATGAATTCTCAAGCATCTTTTTGATGCAGATGAATTGAATGATTGGCTGGTCAAAGGCTGAGATAAAAAGA--TCCCTGCATTCAGGGCAGCC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174482 331 - 77216781 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGGGACAAATTGTT------TTAATGTGGCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTTGTCATTAGGTATTCAGGAGATGGAGGCCATATAAGAATTTTATTTACATGATACTGA-GAATGAGTCACTTCAGACGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTCCAATGCAGATGAATTGAATGATTGGCTAGTCAGAGGCTGAGATAAAAAGA--TCCCTGCATTCAAGGCAGCC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28084792 331 - 80997621 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGGGACAAATTGTT------TTAATGTGGCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTTGTCATTAGGTATTCAGGAGATGGAGGCCATATAAGAATTTTATTTACATGATACTGA-GAATGAGTCACTTCAGACGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTCCAATGCAGATGAATTGAATGATTGGCTAGTCAGAGGCTGAGATAAAAAGA--TCCCTGCATTCAAGGCAGCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131217 331 + 10377808 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCTATTAGGGGACAAATTGTT------TTAATGTGGCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTTGTCATTAGGTATTCAGGAGATGGAGGCCATATAAGAATTTTATTTACATGATACTGA-GAATGAGTCACTTCAGACGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTCCAATGCAGATGAATTGAATGATTGGCTAGTCAGAGGCTGAGATAAAAAGA--TCCCTGCATTCAAGGCAGCC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2037990 331 - 8458610 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGGGACAAATTGTC------TTAATGTGGCATAAGGTACAGTCTGTATTTTACAAGGAATAACTTAGTTTCGTTTACTTTGTCATTAGGTAGTCAGGAGATGGAGGCCATATAAGAATTTTATTTACATGATACTGA-GAATGAGTCACTTCAGATGAGAGTCTCTCTCATGATGATATAAAGTATTCTCAAGCATCTTTTCAATGCAGATGAATTGAATGATTGGCTGGTCAGAGGCTGAGAAAAAAAGA--TCCCTGCATTCAGGGCAGCC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971307 331 + 75148670 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGGGACAAATTGTC------TTAACGTGGCATAAGGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTTGTCATTAGGTATTCAGGAGACAGAGGCCATATAAGAATTTTATTTACATGATACTAA-GATTGAGTCACTTCAGATGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTTCAATGCAGATGAATTGAATGATTGGCTGGTCAGAGGCTGAGATAAAAAGA--TCTCTGCATTCAGGGCAGCC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2222777 328 + 4244037 CCCAGTGTGCAGTTTCTCAGTTCTCAGCTTTGTT-CTTAGTTAATTTTCCTCATAAGATTTCAAGTAGGGGACAAATTGTC------TTAATGTGGCATAATGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTAATTTGTCAATAGGTATCCAGGAGA-GGGGGCCATATAAATATTTTATTTATATGATGCCAA-GAATAAATTTATTCAAATGAGACTCCCTCTTATGAGTCCACAATGAATTCTCAAGCAG-TTTTTGATGCAGGTGAATGGAATGAATGGCAGGTCAGAGGCTGAGATGAAAAGA--TCTCTGCATTCAGGGCAGCC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242278 331 + 4569836 CCCATTGCATACTTTCTCAATTCCCAGCTTAATTCCTTACTTAATTTTCCTCATAACATTTCGATTAGGAGACAAATTGTC------TTAATGTGGCATAAGATATGGTCTGTATTTTACAAGGAATAACTTAGTTTCATTTACTTTGTCATTAGGTATTCAGGAGACGGAGGCCATATAAGAATTTTATTTACGTGATACTGA-GAATGAGTCACTTCAGATGAGACTCTCTCTCATGATGATATAATGAATTCTCAAGCATCTTTTCAATGCAGATGAATTGAATGATTGGCTGGTCAGAGGCTAAGATAAAAAGA--TCCCTGCATTCAGGGCAGCC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1885748 331 + 3513951 CCCATTGCATAGCTTCTCAATTCCCAGCTTTGTTC-TTACTTAATTTTCATCATAACATTTCAATTAGGGAACAGATAGTC------TTCATGTGGCATAATGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTTATTTACTTTGACAATTGATATTCAGGAGATGGGGGCCATATAAGAATTTCATTTACATGATACCAA-GAATAAGTCCCTTCAGATGAGACTCTCTCTCGTGAAGACACAATGAATTCTCATGCAT-TTTTTGGTGCAGATGAATTGAATGAATGGCTCGTCAAAGGCTGAGACAAGAAGAGATCCCTGCATTCAGGGCAGCT i saiBol1.JH378271 I 18679 C 0 s cebCap1.NW_016107543v1 21210 331 - 4077172 TCCATTGCGTAGTTTCTCAATTCCCAGCTTTGTTT-TTACTTAATTTTTCTTGTAACATTTCAATTAGTGGACAGATACTC------TTCATGTGGCATAATGTATGGTCTGTATTTTACAAGGAATAACTTAGTTTTATTTACTTTTTCAATAGATATTCAGGAGATGGGGGCCATATAAGAATTTTATTTACATGATACCAA-GAATAAGTCCCTTCAGATAAGACTCTCTCTCATGAGGACACAATGAATTCTCAAGCAT-TTTTTGATGTAGATGAATTGAATGAATGGCTCATCAGAGGCTGAGACAAAAAGAGGTCCCCAGATTCAGGGCAGCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15021 330 - 94492 CCCATTGCATAGTTTCTCAATTCCCAGCTTTGTTC-TTACTTAATTTTCCTCATAACGTTTCAATTAGGGGACAGATAGTC------TTCATGTGGCATAATGTATGGTCTGTATTTTACAAGGAGTAACTTAGTTTTATTTAATTTGTCAATAGATATTCAGAAGATGGGAGCCATATAAGAATTTTATCTATATGATACCAA-GAATAAGTCCCTTCAGATGAGAGTCTCTCTCATGCGGACACAATGAATTCTCAAGCA--TTTTTGATGCAGATGAATTGAATGAATGGCTCGTCAGAGGCTGAAACAAAAAGAGATCCCTGCATTCAGGGCAGCT i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630427 316 - 852752 TCCATTGTACTGTTTTCAGTTGTCAAGGTTTGTCC-TTACTTAATTTTCATAGTAATACTTAGATCA--AGACAAATTGACTGGAAGTTGGTGGAGCACAATATCTTGTCT----------AGGATCAGATTTATTTATTTCCTTTTATCCATTGACATGTGCTAGA---AGGTCACAC-TGAATT---TTTGCATGAGACCAAGGAGCAGGTCCCTTTAGATGAGCATTCCTAACTTCAC-ACAATGTGGAGTCTCAAAA---TATGTGATGCTGGTGAATGGCATCCATGTGTGGAAAGAGCCTGAGACAAAAACCTGTCCCTGTGTTAAGGGGATCT i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=877260.000000 s hg38.chr17_JH159148v1_alt 67691 110 + 88070 ATTAAATGCAGTCCCTGCTGCCATATCATGCAGCTGTTGCTCACTGAGGTGTGGGAAAC--TTATTTGGGAAAACT---TTTTTGTGAACAAAAATGTTATCTGCAAATATAAGA s panTro5.chr17 16372717 109 + 83181570 ATTAAATGCAGTCCCTGCTGCCATGTCGTGCAGCTGTTGCTCACTGAGGTGTGGGAAAAAATAATTTGGGA---TT---TTTTTGTGAATAAAAATATTATCTGCAAATATGAGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283866 110 + 83442489 ATTAAATGCAGTCCCTGCTGCCATATCATGCAGCTGTTGCTCACTGAGGTGTGGGAAAT--TTATTTGGGAAAACT---TTTTTGTGAACAAAAATGTTATCTGCAAATATAAGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130314 110 + 4267968 ATTAAATGCAGTCCCTGCTGCCATGTCATGCAGCTGTTGCTCACTGAGGTGTGGGAAAAAATAATTTGGGA--TTT---TTTTTGTGAATAAAAATATTATCTGCAAATAGGAGA i gorGor5.CYUI01015385v1 I 5769 C 0 s nomLeu3.chrUn_GL397460_1 2114514 108 - 2193130 ATTAAATGCAGTCCCTGCTGCCATGTCATGCAGCTGCTGCTCACTGAGGTGTGGGAAAA--TAATTTGGGA-ATTT---TTTGTGTGAA-AAAAATATTATCGGCAAATATGAGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174813 108 - 77216781 ATTAAATGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAAT--TAATTTGGGA--ATT---CTTTTGTGAACAAGAATATTATCTGCAAATATGAGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085123 108 - 80997621 ATTAAATGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAAT--TAATTTGGGA--ATT---CTTTTGTGAACAAGAATATTATCTGCAAATATGAGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131548 108 + 10377808 ATTAAATGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAAT--TAATTTGGGA--ATT---CTTTTGTGAACAAGAATATTATCTGCAAATATGAGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038321 111 - 8458610 ATTAAATGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGCGGGAAAC--TAAGTTGGAA--ATTAAGTTTGTGTGAACAAAAATGTTATCTGCAAATATAAGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971638 111 + 75148670 ATTAACTGCAGTCCCTGCTGCCATATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAAC--TAAGTTGGAA--ATGAAGTTTGTGTGAACAAAAATGTTATCTGCAAATATAAGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223105 111 + 4244037 ATTAAATGCAGTCCCTGCTGCCATATCATGCAACTGTTGCTCACTGAGGTGTGGGAAAC--TAAGTAGGAA--ATTAAGTTTGTGTGAACAAAAATGTTATCTGCAAATATAAGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242609 108 + 4569836 ATTAAATGCAGTCCCTGCTGCCCTATTATGCAGCTGTTGCTCACTGAGGTGTGGGAAAC--TAATTTGGGA--ATC---TTTTTGTGAACAAAAATATTATCTGCAAATATGAGA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886079 108 + 3513951 GTCAAACGCAGTCCCTGCTGCCATATCATGCAGTGGTTGCTCACTAGAGTGTGGGAAAT--GAATTTGGGA--ATA---TTTTTGTGAACAAAAATGTTATCTTCAAATATGAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21541 108 - 4077172 ATTAAATGCAGTCCCTGCTGCCATATCATGTAGCAGTTGCTCACTGGAGAGTGGGAAAT--GAATTTGGGA--ATA---CTTTTGTGAACAAAAATGTTATCTGCAAATATGAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15351 108 - 94492 ATTAAATGCAGTCCCTGCTGCCATATCATGCAGTGGTTGCTCACTGAAGTGTGGGAAAT--GAATTTGGGA--ATA---TTTTTGTGAACAAAAATGTTATCTGCAAATATGAAG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 630743 106 - 852752 GTTACATATAGCCACTGATATCTT-TCACATCACTGTTGATCACTGAGGTGTTGGAAAC--TGATTTGGAA--AGA---GCTTTGTATGTGGAAGCATTAACTG-ATATACAAGA i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22862032 5356 + 28711273 I a score=72658.000000 s hg38.chr17_JH159148v1_alt 67801 8 + 88070 GATCATTC s panTro5.chr17 16372826 8 + 83181570 GATTATTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16283976 8 + 83442489 GATCATTC i panPan2.chr17 C 0 I 11031 s gorGor5.CYUI01015385v1 4130424 8 + 4267968 GATTATTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114622 8 - 2193130 GATTATTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174921 8 - 77216781 GATTATTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085231 8 - 80997621 GATTATTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131656 8 + 10377808 GATTATTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038432 8 - 8458610 GATTAATC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971749 8 + 75148670 GATTAATC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223216 8 + 4244037 GATTAATC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242717 8 + 4569836 GATTATTC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886187 8 + 3513951 GATTATTC i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 21649 8 - 4077172 GATTATTC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15459 8 - 94492 GATTATTC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867388 8 + 28711273 gatttttg i otoGar3.GL873537 I 5356 C 0 s dasNov3.JH570468 630849 7 - 852752 -GTTATTT i dasNov3.JH570468 C 0 C 0 a score=1175784.000000 s hg38.chr17_JH159148v1_alt 67809 135 + 88070 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATGTTGAGAGTTAAATGTAAGTGTCCTTGGGCAGAAAGAgaggacctcagcttggatcagaatctgtcct s panTro5.chr17 16372834 135 + 83181570 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATGTTGAGAGTTAAATGTAAGTGTCCTTTGGCAGAAAGAgaggacctcagcttggatcagaatctgtcct i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295015 135 + 83442489 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATGTTGAGAGTTAAATGTAAGTGTCctttggcagaaagagaggacctcagcttggatcagaatctgtcct i panPan2.chr17 I 11031 C 0 s gorGor5.CYUI01015385v1 4130432 134 + 4267968 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATGTTGAGAGTTAAAAGTAAGTGTCctt-ggcagaaagagaggaccccagcttggatcagaatctgtcct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114630 134 - 2193130 CTCTCATTGTTACA--TAAACTC--AAGTGCATGC---CTTGCTAGTGC-TGACT-TCCAATGTCATCTC-A-C-TATATTGAGAGTTAAATGCAAGTGTCCTTGGGCAGAAAGggaagacctcagcttggatcagaatctgtcct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30174929 134 - 77216781 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTATTGC-TGACT-TCCAATGTCA-TTCCA-C-TATATTGAGAATTAAATGTAAGTGTCCTTGGCCAGAAAGAGAGGACCTCAGCTTGGATCAGAATCTGTCCC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085239 134 - 80997621 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTATTGC-TGACT-TCCAATGTCA-TTCCA-C-TATATTGAGAATTAAATGTAAGTGTCCTTGGCCAGAAAGAGAGGACCTCAGCTTGGATCAGAATCTGTCCC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131664 134 + 10377808 CTCTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTATTGC-TGACT-TCCAATGTCA-TTCCA-C-TATATTGAGAATTAAATGTAAGTGTCCTTGGCCAGAAAGAgaggacctcagcttggatcagaatctgtccc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038440 134 - 8458610 CTCTCATTGTTAAA--CAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCA-TTCCA-C-TATATTGAGAATTAAATGTAAGTGCCCTTGGCCAGAAAGAGAGGAACTCAGCTTGGATCAGAATCTGTCCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971757 135 + 75148670 CTCTCATTGTTAAA--GAAACTC--AAGTGCATGT---CTTGCTAGTGT-TGACT-TCCAATGTCATTTCTA-C-TATATTGAGAGTTAAATGTAAGTGTCCTTGGACAGAAAGAGAGGACCTCAGCTTGGATCAGAATCTGTCCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223224 133 + 4244037 CTCTCATTGTTAAA--GAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCATTTCTA-C-TATATTGAGAGTTAAATGTAAGTGTCGTTGG-TAGAAAGAGAGGACCTCAGCTTGGATCAGAATCTGTCC- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242725 134 + 4569836 CTTTCATTGTTAAA--TAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TCCAATGTCA-TTCCA-C-TATATTGAGAATTAAATGTAAGCGTCCTTGGCCAGAAAGAGAGAACCTCAGCTTGGATCAGAATCTGTCCT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886195 135 + 3513951 CTCTTATTGTTAAA--CAAACTT--AAGTGCATGT---TTTGCTAGTGC-TGACT-TTCAAGGTCATTTCTA-C-CTTATTGAGAGTTAAATGTAATTGTCGTTGGGCAGAAGGAGAGGACCTCATCTTGGATCAGACTCTGTCCT i saiBol1.JH378271 C 0 I 315 s cebCap1.NW_016107543v1 21657 135 - 4077172 CTCTTACTGTTAAG--CAAACTC--CAGTGCATGT---CTTGCTAGTGC-TGACT-TTCAAGGTCATTTCTA-C-CTTATTGAGAGTTAAATGTAATTGTCCTTGGACAGAAGGAGAGGACCTCATCTTGGATCAGACTCTGTCCT i cebCap1.NW_016107543v1 C 0 I 318 s aotNan1.NW_018505111v1 15467 135 - 94492 CTCTTATCGTTAAA--CAAACTC--AAGTGCATGT---CTTGCTAGTGC-TGACT-TTCAAAGTCATTTCTA-C-CTTATTGAGAGTTAAATGTAATTGTCCTTGGGCAGAAGGAGAGGACCTCATCTTGAATCAGACTCTGTCCT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22867396 131 + 28711273 ttgttgttgTT--------GCTC--AAGTGCACAG---CTCACCAGTTC-TCATTCTCCAGTAGCAGTTCTAGT-TGCTTTGAGATGGACATGCAGGTGCCCTTGAGCAGACACCGCAGACCCAGTCCTGGATGTCAGTGTGACTA i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 630856 140 - 852752 ----CTTTGCTAAAATGGAATTCAAAAGTCCTTGTTCCCCTGCTAATGCTTGGTC-TGCACCACCATTTCTC-CTTACCTTGAGATGGAAGTGTGAGAGACCTCCACCAGAGCTAGAGGACCCAGTTCTGGATCTGAGTTTGTGCA i dasNov3.JH570468 C 0 C 0 a score=12376.000000 s hg38.chr17_JH159148v1_alt 67944 1 + 88070 t s panTro5.chr17 16372969 1 + 83181570 t i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295150 1 + 83442489 t i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130566 1 + 4267968 t i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114764 1 - 2193130 t i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175063 1 - 77216781 T i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085373 1 - 80997621 T i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131798 1 + 10377808 t i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038574 1 - 8458610 T i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971892 1 + 75148670 T i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223357 1 + 4244037 T i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242859 1 + 4569836 T i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886645 1 + 3513951 T i saiBol1.JH378271 I 315 C 0 s cebCap1.NW_016107543v1 22110 1 - 4077172 T i cebCap1.NW_016107543v1 I 318 C 0 s aotNan1.NW_018505111v1 15602 1 - 94492 T i aotNan1.NW_018505111v1 C 0 I 317 s otoGar3.GL873537 22867527 1 + 28711273 T i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 630996 1 - 852752 T i dasNov3.JH570468 C 0 C 0 a score=35331.000000 s hg38.chr17_JH159148v1_alt 67945 7 + 88070 tattagc s panTro5.chr17 16372970 7 + 83181570 tattagc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295151 7 + 83442489 tattagc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130567 7 + 4267968 tattagc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114765 7 - 2193130 ttttagc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175064 7 - 77216781 TATTAGC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085374 7 - 80997621 TATTAGC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131799 7 + 10377808 tattagc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038575 7 - 8458610 TATTAGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971893 7 + 75148670 TATTAGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223358 7 + 4244037 TATTAGC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242860 7 + 4569836 TATTAGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886646 6 + 3513951 TATTAC- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22111 6 - 4077172 TATTGC- i cebCap1.NW_016107543v1 C 0 C 0 s otoGar3.GL873537 22867528 7 + 28711273 TATTCAC i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 630997 7 - 852752 TTCTACA i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 15603 317 - 94492 I a score=690187.000000 s hg38.chr17_JH159148v1_alt 67952 83 + 88070 tacataacatcacatattaattttttttcaggtg--aaaaatgaaggtaataatgcatgaccacctgttttgagaatcaaattgg s panTro5.chr17 16372977 83 + 83181570 tacataacatcacatattaattttttttcaggtg--aaaaatgaaggtaataatacatgaccacctgttttgagaatcaaattgg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295158 83 + 83442489 tacataacatcacatattaattttttttcaggtg--aaaaatgaaggtaataatacattaccacctgttttgagaatcaaattgg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130574 82 + 4267968 tatataacatcacatattaa-tttttttcaggtg--aaaaatgaaggtaataatacatgaccacctgttttgagaatcaaattgg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114772 82 - 2193130 tacatgacaacacacattac-attttttcaggtg--aaaaatgaaggtaataatacatgatcatctgttttgagaatcaaattgg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175071 83 - 77216781 TACATAACATCGCATATTAAATATTTTTCAGGTG--AAAAATGAAGGCAATAATAGATGACCATCTGTTTTGAGAATCAAATTGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085381 83 - 80997621 TACATAACATCGCATATTAAATTTTTTTCAGGTG--AAAAATGAAGGCAATAATAGATGACCATCTGTTTTGAGAATCAAATTGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131806 83 + 10377808 tacataacatcgcatattaaatttttttcaggtg--aaaaatgaaggcaataatagatgaccatctgttttgagaatcaaattgg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038582 83 - 8458610 TACATAACATCATATATTAAATTTTTTTCAGGTG--AAAAAGGAAGGTAATAATAGATGACCATCTGTTTTGAGAATCAAATTGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971900 83 + 75148670 TACATAACATCACACATTAAATTTTTTTCAGGTG--AAAAATGAAGGTAATAATAGATGACCATCTGTTTTGAGAATCAAATTGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223365 84 + 4244037 TACATATCATCACACATTAAATTATTCTCAGCTG-AAAAAATGAAGGTAACGATACATAACCAACTGCTTTGAGAATCAAGTTGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242867 83 + 4569836 TACATAACATCACATATTAATTTTTTTTCAGGTG--AAAAATGAAGGTAATAACAGATGACCATCTGTTTTGAGAATCAAATTGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886652 83 + 3513951 TACATAACATCACACATTAAATttttctcagctg--aaaaatgaaggtaataatccatgaccatctgttctgaggatcaaattaa i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22117 83 - 4077172 TACATAATATCACATATTAAATTGttctcagctg--aaaaatgaaggtaataatccatgaccatctgttctgaggatcaaattaa i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 15920 83 - 94492 TACATAACATCACACATTAAATTGttctcagctg--aaaaatgaaggtaataatccatgaccatctgttctgcagatcaaattaa i aotNan1.NW_018505111v1 I 317 C 0 s otoGar3.GL873537 22867535 85 + 28711273 TACAAGACATTATGCTATGAAGTTTTCTCATCTGAAAAAAATGATATTAACAATACAAGGGTAACTGTATTGAAAAGAAAAATGG i otoGar3.GL873537 C 0 I 7349 s dasNov3.JH570468 631004 80 - 852752 TATGTGACTACACAAGTCAA--TTTTCTAATCTG--AAGAGAGG-GGCAATATTTACTAGGTGGTTTTTAAGAGGCAGAGAATAG i dasNov3.JH570468 C 0 C 0 a score=829778.000000 s hg38.chr17_JH159148v1_alt 68035 92 + 88070 ataataactatggtatgtgaTATGTGTGTAAATCCC-ATATCAGGAGTGCTTTCAAATAAAACAAA-ACACTATATGAGATGAGGATGGTTCAG s panTro5.chr17 16373060 92 + 83181570 ataatacctatggtatgtgaTATGTGTGTAAATCCC-ATATCAGGAGTGCTTTCAAATAAAACAAA-ACACCATATGAGATGAGGATGGTTCAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295241 92 + 83442489 ataatacctatGGTATGTGATATGTGTGTAAATCCC-ATATCAGGAGTGCTTTCAAATAAAACAAA-ACACCATATGAGATGAGGATGGTTCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130656 92 + 4267968 ataatacctatggtatgtgataagtgtgtaaaTCCC-ATATCAGGAATGCTTTCAAATAAAACAAA-ACACTATATGAGACGAGGATGGTTCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114854 92 - 2193130 ataatacctatggtatgtgaTATGTGTGTAAATCCC-ATATCAGGAATGCTTTCAAATAAAACAAA-ACACCATATGAAATGAGGATGATTCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175154 92 - 77216781 ATAATACCTGTGGTATGTGATACGTATGTAAATCCC-ATATCAGGAATGCTTTCAAATAAAACAAA-ACACCATATGAGATGAAGATGGTTCAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085464 92 - 80997621 ATAATACCTATGGTATGTGATATGTATGTAAATCCC-ATATCAGGAATGCTTTCAAATAAAACAAA-ACACCATATGAGATGAAGATGGTTCAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131889 92 + 10377808 ataatacctatggtatgtgatacgtatgtaaaTCCC-ATATCAGGAATGCTTTCAAATAAAACAAA-ACACCATATGAGATGAAGATGGTTCAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038665 92 - 8458610 ATAATAATTATGGTATGTGATACGTATGTAAATCCC-ATATCACAAATGCTTTCAAATAAAACAAA-ACACCATATGAGATGAAGATGGTTCAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64971983 92 + 75148670 ATAATAATTATGGTATGTGATACGTATGTAAATCCT-ATATCAGAAATGCTTTCAAATAAAACAAA-ACACCATATGAGATGAAGATGGTTCAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223449 92 + 4244037 ATAATACCTATGGTATATGATATGTGTGTAAATCCC-ATATCAGAAATTCTTTCAAATAAAACAAA-ACACCTTATGAGATGAGGATACTTCAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2242950 92 + 4569836 ATAATACCTATGGTATGTGATACATATGTAAATCCC-GTATCAGGAATGCTTTCAAATAAAACAAA-ACACCATATGAGATAAAGATGGTTCAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886735 90 + 3513951 ataatacatatgGTATGT--TATGTGTGTAAACCCC-ATATCAGGAATGCTTTAAAATAAAACAAA-ATACCATATGAGATGAGGATGGTTCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22200 92 - 4077172 ataatacatatgGTATGTTATATGTGTGTAAATCCC-ATATCAGGAATGCTTTAAAATAAAACAAA-ACACCATATGAGATGAGGATGGTTCAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16003 92 - 94492 ataatacatatgGTATGTGACATGTGTGTAAATCCC-ATATCAGGAATGCTTTAAAATAAAATAAA-ACACCATATGAGATGAGGATGGTTCAG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 631084 94 - 852752 ATAATGACTATGGTAAGGGATTTGTATAAAAATCCCTATGTCAGAAGGGCCATACAACAAGAGGGGCACATGATATGGATGAATAATGGTAGAG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22867620 7349 + 28711273 I a score=9096.000000 s hg38.chr17_JH159148v1_alt 68127 1 + 88070 A s panTro5.chr17 16373152 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295333 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130748 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114946 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175246 1 - 77216781 A i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085556 1 - 80997621 A i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131981 1 + 10377808 A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038757 1 - 8458610 C i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972075 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223541 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243042 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886825 1 + 3513951 A i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22292 1 - 4077172 A i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16095 1 - 94492 A i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22874969 1 + 28711273 A i otoGar3.GL873537 I 7349 I 24219 s dasNov3.JH570468 631178 1 - 852752 A i dasNov3.JH570468 C 0 C 0 a score=1724703.000000 s hg38.chr17_JH159148v1_alt 68128 199 + 88070 ATTTATTCAGAAACATATAGGTAAGGATTTCTGCTACCAGGGACACAACACAAATTTATCATGAAAAGAAGAAAGA-AGGATACAAGAACGA---------TGAGGAGGATATTGAAAACAAA---------A-----AAAA--GATTGCAAAGATCATCGATCAGTTGCAGAAACCTA------------------------------AATTCCTTAGAAGCAGGGAATGAAGCTCTTGACTTTAGAGTCAAAG s panTro5.chr17 16373153 200 + 83181570 ATTTATTCAGAAACATATAGGTAAGGATCTCTGCTACCAGGGACACAACCCAAATTTATCATGAAAAGAAGAAGGA-AGGATACGAGAACCA---------TGAGGAGGATATTGAAAACAAA---------A-----AAAA-AGATTGCAAAGATCATCGATCAGTTGCAGAAACCTA------------------------------AATTCCTTAGAAGCAGGGAATGAAGCTCTTGACTTTAGAGTCAAAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295334 199 + 83442489 ATTTATTCAGAAACATATAGGTAAGGATCTCTGCTACCAGGGACACAACCCAAATTTATCATGAAAAGAAGAAGGA-AGGATACAAGAACCA---------TGAGGAGGATATTGAAAACAAA---------A-----AAAA--GATTGCAAAGATCATCGATCAGTTGCAGAAACCTA------------------------------AATTCCTTAGAAGCAGGGAATGAAGCTCTTGACTTTAGAGTCAAAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130749 201 + 4267968 ATTTATTCAGAAACATACAGGTAAGGATCTCTGCTACCAGGGACACAACCCAAATTTATCATGAAAAGAAGAAAGA-AGGATACAAGAACGA---------TGAGGAGGATATTGAAAACAAA---------A-----AAAAAAGATTGCAAAGATCATTGATCAGTTGCAGAAGCCTA------------------------------AATTCCTCAGAAGCAGAGAATGAAGCTCTTGACTTTAGAGTCAAAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2114947 205 - 2193130 GTTTATTCAGAAACATATAGGTAAGAATCTCTGCTACCAGGGACACAACCCAAATTTATCATGAAAAGAAG---GA-AGGATACAAGAATGA---------TGAGGAGGATATTGAaaacaaacaaacaaaca-----aaaa--aaTTGCAAAGATTATTGATCAGTCGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAACGAAGCTCATGACTTTAGAGTCAAAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175247 199 - 77216781 GTTTATTCAGAAACATAGAGTTAAGAATCTCTGCTACCAGGAACACAACCCAAAGTTATCATGAAAAGAAGAAAGA-AGGATAGAAGAACCA---------TGAAGAGGATATTGAAAACAAA---------T-----ATAC--GATTGCAAAGATTATTGCTCAGTTGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085557 199 - 80997621 GTTTATTCAGAAACATAGAGTTAAGAATCTCTGCTACCAGGAACACAACCCAAAGTTATCATGAAAAGAAGAAAGA-AGGATAGAAGAACCA---------TGAAGAGGATATTGAAAACAAA---------T-----ATAC--GATTGCAAAGATTATTGCTCAGTTGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2131982 199 + 10377808 GTTTATTCAGAAACATAGAGTTAAGAATCTCTGCTACCAGGAACACAACCCAAAGTTATCATGAAAAGAAGAAAGA-AGGATAGAAGAACCA---------TGAAGAGGATATTGAAAACAAA---------T-----ATAT--GATTGCAAGGATTATTGCTCAGTTGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038758 208 - 8458610 GTTTATTCAGAAACATATAGTTAAGAATCTCTGCTACCAGGAACACAACCCAAAGTTATCATGAAAAGAAGAAAGA-AGGATAGAAGAACCAAAGAAGGATAGAAGAGGATATTGAAAACAAA---------T-----ATAT--GATTGCAAAGATTATTGATCAGTTGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972076 197 + 75148670 GTTTATTCAGAAACATATAGTTAAGAATCTCTGCTACCAGGAACACAACCC--AGTTATCATGAAAAGAAGAAAGA-AGGATAGAAGAACCA---------TGAAGAGGATATTGAAAACAAA---------T-----ATAT--GATTGCAAAGATTATTGCTCAGTTGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2223542 198 + 4244037 GTTTATTCAGAATCATATAGCTAAGAACTTCTGCTACCAGGGACATAACCCAAAGTTATCATGAACACAAGAAAGA-AGGATACAAGAAACA---------TAAGGAGGATATTGAAAACAAA---------------AAAA--GATTGCAAAGATTATTGATCAATTGCAGAAACCTA------------------------------AATTCCTTAGAAGCAGAGAACGAAGCTCTTGAATATTGAGTCAAAG i manLeu1.NW_012106252v1 C 0 I 2560 s colAng1.NW_012122154v1 2243043 199 + 4569836 GTTTATTCAGAAACATATAGTTAAGAATCTCTGCTACCAGGAACACAACCCAAAGTTATCATGAAAAGAAGAAAGG-AGGATAGAAGAACCA---------TGAAGAGGATATCAAAAACAAA---------T-----ATAT--GATTGCAAAGATTATTGCTCAGTTGCAGAAGCCTA------------------------------AATTCCTTAGAAGCAGAGAATGAAGCTCATGACTTTAGAGTCACAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1886826 199 + 3513951 GTTTATTCAGAAACATGTAGGCAAGAATCTCTGCTACCAGGAATATGACCCAAAGTTACCACAAAAAGAAGAAAGA-AAGATACAAGAACAA---------TGAGGAGGATACTGAAAACAAA---------A-----TTAT--GACTGCAAAGATTATGGATTAGTTTCAGAAACCTA------------------------------AATTTCTGAGAAACAGAGAATGAAGCTCTTGACTTTAGAGTCAAAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22293 199 - 4077172 GTTTATTCAGAAACATGTAGGCAAGAATCTCTGCTACCAGGAACATGACCCAAAGTTATCATGAAAAGAAGAAAGA-AAGATACAAGAACAA---------TGAGGAGGATATTGAAGACAAA---------A-----TTAT--AACTGCAAAGATTATGGATCAGTTGCAGAAACCTA------------------------------AATTTCTGAGAAGCAGAGAATGAAGCTCTTGACTTTAGAGTCAAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16096 199 - 94492 GTTTATTCAGAAACATGTAGGTAAGAGTCTCTGCTACCAGGAACATAGTCCAAAGTTATCATGAAAAGAAGAAAGA-AAGATACAAGAACAA---------TGAGGAGGATATTGAAAACAAA---------A-----TTAT--GATCGCAAAGATTATGGATTATTTGCAGAAACCTA------------------------------AATTTCTGAGAAGCAGAGAATGAAGCTCTTGACTTTAGAGTCAAAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899189 187 + 28711273 ATTTATTAGGAAATAAACAGGGGAGACTTTTCAAAACACGGAAAACAATTTAAAACGGTTATAAAGGGGAAAAGGGTAGGGTACGAGAA------------TAAGGAATACATGGAGAAAAAA---------ATTCACTTAT--CATTGGGAAG----------AGTTA-AGAAGTCAT------------------------------AGGTTTTTGTCTGCTGAGTTTGGGGGC----GGCTTAGAGTGATAG i otoGar3.GL873537 I 24219 I 17 s dasNov3.JH570468 631179 223 - 852752 ATTTATTTAGAAACATATAGATAAGACTCCTTGCCTCTAGGGAGACAACTCAAAGTTATCATGAAAACAAGAAAAC-ATGGCACAAGGGTCA---------T---GGGTATATTAAAAATAAA---------A--------T--GATTAGGTAGGTTATAGATCAATCACAGAAACCCATGGAAAGAGTTATGAGCACTTGTTTGCTTCAGTTACTTGGAGTTAGTGGGTGAATTTCTTGACTTCAGAGTGAAAG i dasNov3.JH570468 C 0 C 0 a score=3547904.000000 s hg38.chr17_JH159148v1_alt 68327 383 + 88070 CTGAGACCATGACTCAAACTTGAGAACAGATGAAGCTGGCACATGATC-----------CACAAGGTGTAAGGAAAAAGAGAATCAGGATGAAGTATTCTGCCCTCCCTCAAGCAGATTTCCAAGATTTTAAACATGTAGAGAATTCATAA--AAATTTGGGTGAGAGC-ATGGTGGCTGTCAGCAGC------AAATTAAATTAGTCCCCCAAAAGATGAGTCAGTTGAGCAGAAATTTGTTGTG-----TGAGGATGGTGGTTCTCT--TGGAACGTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCACGGCTGGCAGCAGTTGGAGCCACAGCTCTGGTT s panTro5.chr17 16373353 383 + 83181570 CTGAGACCATGACTCAAACTTGAGAACAGATGAAGCTGGCACATGATC-----------CACAAGGTGTAAGGAAAAAGAGAATCAAGATGAAGTATTCTGCCATCCCTCAAGCAGATTCCCAAGATTTTAAACATGTAGAGAATTCATAA--AAATTTGGGTGAGAGC-ATGGTGGCTGTCAGCAGC------AAATTAAATTAGTTTCCCAAAAGATAAGTCAGTTGAGCAGAAATTTGTTGTG-----TGAGGATGGTGGTTCTCT--TGGAATGTGATCAGCAGCAAGAAGGCTGGCAACAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGTGGCAGCAGGGCTGGCAGCAGCTGGAGCCACAGCTCTGGTT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295533 383 + 83442489 CTGAGACCATGACTCAAACTTGAGAACAGATGAAGCTGGCACATGATC-----------CACAAGGTGTAAGGAAAAAGAGAATCAGGATGAAGTATTCTGCCATCCCTCAAGCAGATTCCCAAGATTTTAAACATGTAGAGAATTCATAA--AAATTTGGGTGAGAGC-ATGGTGGCTGTCAGCAGC------AAATTAAATTAGTTGCCCAAAAGATAAGTCAGTTGAGCAGAAATTTGTTGTG-----TGAGGATGGTGGTTCTCT--TGGAACGTGATCAGCAGCAAGAAGGCTGGCAACAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGTGGCAGCAGGGCTGGCAGCAGCTGGAGCCACAGCTCTGGTT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4130950 383 + 4267968 CTGAGACCATGACTCAAAATTGAGAACAGACGAAACTGGCACATGATC-----------CACAAGGTGTAAGGAAAAAGAGAATCAAGATGAAGTATTCTGCCCTCCCTCAAGTAGATTCCCAAGATTTTAAACATGTAGAGAATTCATAA--AAATTTGGGTGAGAGC-ATGGTGGCTGTCAGCAGC------AAATTAAATTAGTCCCCCAAAAGATGAGTCAGTTGAGCAGAAATTTGTCATG-----TGAGGATGGTGGTTCTCT--TGGAACGTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGTACACA------------------CAGGTGGTCGGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGAGCCACAGCTCTGGTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115152 383 - 2193130 CTGAGACCATGACTCAAAATTGAGAACACACAAAGCTGGCACATGATC-----------CACAAGGTATAAGGAAAAACAGAATCAGGATGAAGTTTTCTGCTGTCCCTCAAGCAGATTCCCAAGATTTTAAACATGCAGAGAATTCATAA--AAATTTGGGTGACAGC-ATGGTGGCTGTCAGCAGC------AAATTAAATTAGTCCCCCAAAAAATAAGTCAGTTGAGCAGAAAGTTGTTGTG-----TGAGGATAGTGGTTCTCT--TGGGAGTTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAACAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGAGCCACAGTTCTGGTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175446 383 - 77216781 CTGAGACCATGACTCCAAATTGAGAGCACACGAAGCTGGCACATGATC-----------CACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCGTCTAGCAGATTCCCAAGATTTTAAACATACAGAGAATTCATAA--AAATTTGGGTGACAGC-ACGGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATCAGTCAGTGGGGCAGAAAGTTGTTGTG-----TGAGGACGGTGGTTGTCT--TGGGACTTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28085756 383 - 80997621 CTGAGACCATGACTCCAAATTGAGAGCACACGAAGCTGGCACATGATC-----------CACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCGTCTAGCAGATTCCCAAGATTTTAAACATACAGAGAATTCATAA--AAATTTGGGTGAGAGC-ACGGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATCAGTCAGTGGGGCAGAAAGTTGTTGTG-----TGAGGACGGTGGTTGTCT--TGGGACTTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132181 383 + 10377808 CTGAGACCATGACTCCAAATTGAGAGCACACGAAGCTGGCACATGATC-----------CACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCATCTAGCAGATTCCCAAGATTTTAAACATACAGAGAATTCATAA--AAATTTGGGTGAGAGC-ACGGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATCAGTCAGTGGAGCAGAAAGTTGTTGTG-----TGAGGACGGTGGTTGTCT--TGGGACTTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2038966 383 - 8458610 CTGAGACCATGACTCCAGATTGAGAGCACACGAAGCTGGCACATGATC-----------CACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCATCTAGCAGATTCCCAAGATTTTAAACATGCAGAGAGTTCATAA--AAATGTGGGTGAGAGC-ACAGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATCAGTCAGTCGAGCAGAAAGTTGTTGTG-----TGAGGACGGTGGTTCTCT--TGGGACTTGATCAGCAGCAAGAAGGCTGGCAGCAGTTGGTCACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972273 382 + 75148670 CTGAGACCGTGACTCCAGATTGAGAGCACACGAAGCTGGCACATGATC-----------CACAAGGGGTAAGAAAAAAGAGAAACAGGATGAAGTATTCTGACATCCGTCTAGCAGATT-CCAAGATTTTAAACATGCAGATAATCCATAA--AAATTTGGGTGAGAGC-ATGGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATCAGTCAGTTGAGCAGAAAGTTGCTGTG-----TGAGGACGGTGGTTCTCT--TGGGAGCTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226300 383 + 4244037 CTGAGACCATGACTCCAAATTGAGAACACACGAAGCTGGCACATGATC-----------CACAAGGTGGAAGGTAAAAGAGAATCAGGATGAAGTATTCTGCCCTCTCTCAAGCAGATTCCCAAGATTTTAAACATGCAGATAATTCATAA--AAATTTGGGTGAGAGC-ATGGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATAAGTCAATTGAGCAGAAGGTTCTTGTG-----TGAGGACGGTGGTTCTCT--TGGGAGTTGATCAACAGCAAGAAGGCTGGCAGCAGTTGGTCACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCATAGCTCTGGTT i manLeu1.NW_012106252v1 I 2560 C 0 s colAng1.NW_012122154v1 2243242 383 + 4569836 CTGAGACCATGACTCCAAATTGAGAGCACACGAAGCTGGCACATGATC-----------CACAAGGTGGAAGGAAAAAGAGAAACAGGATGAAGTATTCTGCCCTCCCTCCAGCAGAGTCCCAAGATTTTATACATGCAGAGAATTCATAA--AAATTTGGGTGAGAGC-ACGGTGGCTGTCAGCAGC------AAAGTAAATTAGTCCCCCAAAAGATAAGTCAGTTGAGCAGAAAGTTGTTGTG-----TGAGGACGGTGGTTCTCT--TGGGACTTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGAAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGAGCCACAGCTCTGGTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1887025 383 + 3513951 CTGAGACCATGACTCCAAACTGAGCACACAGGAACCTGGCACATGATC-----------CACAAGGTGTAAGGAGAAAGAGAATCAGGATGAAGTACTCTGCCCTCCCTCGAGCTGAATCACCAGATTTTAAACATGGAGAGAATTCATAA--AAATGTGGGTGAGAGC-ATGGTGGCAGTCAGCAGC------AAAGTAAATTAGTTCCCCAAAAGATAAGTCAGTTGAGCAGAAGGCTGTTGTG-----TGAGGATGGTGATTCTCT--TGGGAGTTGATCAGCAGCAGGAAGGCTGGCAGCAGCTGGTCACA------------------CAGGTGGGCTGGCAGCAGGTGGTCCTACAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 22492 383 - 4077172 CTGAGACCATGACTCCAAACTGAAGACACAGAAACCTGGCACATGATC-----------CACAAGGTGTAAGGAAAAACAGAATCAGGATGAAGTACTCTGCCTTCCCTCAAGCTGATTCAAAAGATTTTAAACATGGAGAGAATTCATAA--AAATTTGGGTGAGAGC-ATGGTGGCGGTCAGCAGC------AAAGTAAATTAGTTCCCCAAAAGATAAGTCAGTTGAGCAGAAGGCTGTTGTG-----TGAGGATGGTGGTTTTCT--TGGGAGTTGATCAGCAGCAAGAAGGCTGGCAGCAGCTGGACACA------------------CAGGTGGGCTGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i cebCap1.NW_016107543v1 C 0 T 12225 s aotNan1.NW_018505111v1 16295 383 - 94492 CTGAGACCATAACTCCAAACTGAGAACACAGGAAGCTGTCACGTGATC-----------GCCAAGGTGTAAGGAAAAAGAGAATCAGGATGAAGTATTCTGCCTTCCCTCATGCTGATTCACAAGATTTTAAACATGGAGAGAATTCATAA--AAATGTGGGTGAGAGC-ATGGTGGCAATCAGCAGC------AAAGTAAATTAGTTCCCGGAAAGACAAGTCAGTTGAGCAGAAGGCTGTTGTG-----TGAGGATGGTGGTTCTCT--TGGGAGTTGATCAGCAGCAAGAAGGCTGGCAGCAGGTGGTCACA------------------CAGGTGGGCCGGCAGCAGGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGCAGGGCTGGCAGCAGCTGGATCCACAGCTCTGGTT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899393 289 + 28711273 GTGAAAACATTAGTGAAGATGAAGAACAGATGAAGTAGAC-CAAGATTTGGAGCTAGTGCTCAACAGATAAAGAG-GAGAGAAGT-GGATAAAACATGCTGCCCTCCATCAGGCAGACACTTGAGACCCTTTATAACAAGATGATCCAAAC--ATAGTTTGATGATGGC--------------------------------------------AAAGCT-------TGGAGTGTGATTTTGTTGTAGAACCTGGGTTGGGTGATGCCACAGTGGAATGTTGCCTTCAGCAAGAGTGTTGA-----------------------------------------------------------------------------------TCAGCAGCAGGAAGGCTGGCAGCAGCTGGATCCACAGCCCAGGTT i otoGar3.GL873537 I 17 C 0 s dasNov3.JH570468 631402 401 - 852752 CTGAGGACATTAAGTCA---TGTGACTATGAGAAGC-AATACATGATC-----------CAGAAGACATGAGGAAGAAGGTAATCAAGGTGAAATAGTCTGCACTCCATCAAATGGATTCACAAGCTTTTAAACATACAGATAA---ATAACTCCATTTTGTTGAGAGTGAAGCTGGGTATCAGTAAAGTCTAGGCAGTGATTTTGTCCCAGGAGTGACGGGTCAGTTGA-TAGAAGGCTGGTCTG-----TGCACTTGGTGGTT-TTT--GGTGAGTTGATCAGCAGCACAAAGGCTGACAGCAACTGGACACACAGCAAGGGCTGCTGCAGCAGCTGGGGTGGCAGCAGGTGGTTCTACAGCAGGTGGTCTGACAGCAGGATGGGCGGCAGCAAGGCTGGCAACAGGTGGATCTGCAGCTCTGGGG i dasNov3.JH570468 C 0 C 0 a score=1276156.000000 s hg38.chr17_JH159148v1_alt 68710 129 + 88070 TAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAGTAGCAGGTTCTTCTGCAGTACACAGGTGCA------------------------------------------CAGGAGCTGCTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA s panTro5.chr17 16373736 117 + 83181570 TAGGCAACCAGGCAGGCAGACATTCGTGGGGTAGTAGCAGGTTCTTCTGCAGTACACAGGTGTA------------------------------------------CAGGAGCTGCTCTGGCCACAGCTGG------------TTTGGCCACAGCAGCTGGACCCACAGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16295916 129 + 83442489 GAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAGTAGCAGGTTCTTCTGCAGTACACAGGTGCA------------------------------------------CAGGAGCTGCTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGAACCCACAGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131333 129 + 4267968 TAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAGTAGCAGGTTCTTCTGCAGTACACAGGTGCA------------------------------------------CAGGAGCTGCTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115535 129 - 2193130 TAGGCAACCAGGCAGGCAGACAGTCGTGGGGTAATAGCAGGTTCTTCTGCAGTACACAGGTGCA------------------------------------------CAGGAGCTGCTCTGGCAACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175829 129 - 77216781 TAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGGGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTTGACCCACAGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086139 129 - 80997621 TAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGGGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTTGACCCACAGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132564 129 + 10377808 TAGGCAACCAGGCAGGCAGACACTTGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039349 129 - 8458610 TAGGCAACCAGGCAGGCAGACACACGTGGGGTGATAGCAGGTCCTCCTGCAGTAGACAGGTGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972655 129 + 75148670 TAGGCAACCAGGCAGGCAGACACATGTAGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCAGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226683 129 + 4244037 TAGGCAACCAGGCAGGCAGACACATGTGGGATGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCA------------------------------------------CAGGAGCTGATCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243625 129 + 4569836 TAGGCAACCAGGCAGGCAGACACATGTGGGGTGGTAGCAGGTTCTTCTGCAGTAGACAGGTGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTAGTTTGGCCACAGCAGCTGGACCCACAGCA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1887408 129 + 3513951 TAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTCGTGCAGTACACAGGTGCA------------------------------------------CAGGAGCTGGTCTGGCCACAGCTGGACCCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i saiBol1.JH378271 C 0 I 15242 s cebCap1.NW_016107543v1 10650 117 - 4077172 CAGGCAACCAGGCAGGCAGACACACGTGGGGTGGTAGCAGGTTCTACTGCAGTATACAGGTACA------------------------------------------CAGGAGCTGGTCTGG------------CCACAGCTGGTTTGGCCACAGCAGCTGGACCCACAGCA i cebCap1.NW_016107543v1 T 12225 C 0 s aotNan1.NW_018505111v1 16678 117 - 94492 TAGGCAACCAGGCAGGCAGACACACGTGGGGTGATAGCAGGTTCTCCTGCAGTACACAGGTGCA------------------------------------------CAGGAGCTGGTCTGG------------CCATAGCTGGTTTGGCCACAGCAGCTGGACCCGCAGCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899682 99 + 28711273 CAGACAACCAGGCAGGCAGACGCAGGTGGGCTGGTAGCAGGTCCTGGTGCAGTAGACAGGTGCA------------------------------------------CAGCTGCTGGGCTGG------------------------------CAGCAGGAGGTGCCACAGCA i otoGar3.GL873537 C 0 I 1 s dasNov3.JH570468 631803 171 - 852752 TTGGCAGCCAGGCAGGCAGCAGCATGTTGGGTGGTAGCAGGTTCTCCTGCAGTACACGGGGCCACTGCAAGCTGGCTGGCAGCAGGTTGTGTAGCAGCAACTGGGGCGGCAGCAAGGCTGACAGCTGCTGGACCCACCGCAGGTTTGGCCATAGGAACTGGACCCACAGCA i dasNov3.JH570468 C 0 C 0 a score=24121.000000 s hg38.chr17_JH159148v1_alt 68839 3 + 88070 GGT s panTro5.chr17 16373853 3 + 83181570 GGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296045 3 + 83442489 GAT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131462 3 + 4267968 GGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115664 3 - 2193130 GGT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175958 3 - 77216781 GGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086268 3 - 80997621 GGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132693 3 + 10377808 GGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039478 3 - 8458610 GGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972784 3 + 75148670 GGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226812 3 + 4244037 GGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243754 3 + 4569836 GTT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1902779 3 + 3513951 GGT i saiBol1.JH378271 I 15242 I 159 s cebCap1.NW_016107543v1 10767 3 - 4077172 GGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16795 3 - 94492 GGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899782 2 + 28711273 GA- i otoGar3.GL873537 I 1 C 0 s dasNov3.JH570468 631974 3 - 852752 GGT i dasNov3.JH570468 C 0 C 0 a score=247430.000000 s hg38.chr17_JH159148v1_alt 68842 28 + 88070 GGGCTGGCAGCAGGTTGTGCTGCAG---------------------------CAG s panTro5.chr17 16373856 28 + 83181570 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296048 28 + 83442489 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131465 28 + 4267968 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115667 28 - 2193130 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175961 28 - 77216781 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086271 28 - 80997621 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132696 28 + 10377808 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039481 28 - 8458610 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972787 13 + 75148670 GGGCTGGCAGCAG------------------------------------------ i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2226815 28 + 4244037 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i manLeu1.NW_012106252v1 C 0 I 7686 s colAng1.NW_012122154v1 2243757 28 + 4569836 GGGCTGGCAGCAGGGTGTGCTGCAG---------------------------CAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1902941 28 + 3513951 GGGCTGGCAGCAGGGTGTGCTGCTG---------------------------CAG i saiBol1.JH378271 I 159 C 0 s cebCap1.NW_016107543v1 10770 28 - 4077172 GGGCTGGCAGCAGGATGTGCTACAG---------------------------CAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16798 55 - 94492 GGGCTGGCAGCAAGGCGTGCTGCAGCACGAAGGCTGGCAGCAGCTGGTCACACAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899784 14 + 28711273 GGGACGGCAGCAGG----------------------------------------- i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 631977 28 - 852752 GGGCTGGCAGCAGGGAGTGGTGCAG---------------------------CAG i dasNov3.JH570468 C 0 C 0 a score=7350.000000 s hg38.chr17_JH159148v1_alt 68870 1 + 88070 G s panTro5.chr17 16373884 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296076 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131493 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115695 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30175989 1 - 77216781 G i rheMac8.chr16 C 0 I 195 s macFas5.chr16 28086299 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132724 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039509 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2234529 1 + 4244037 G i manLeu1.NW_012106252v1 I 7686 C 0 s colAng1.NW_012122154v1 2243785 1 + 4569836 G i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1902969 1 + 3513951 C i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10798 1 - 4077172 G i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16853 1 - 94492 G i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 632005 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22899798 0 + 28711273 C e chlSab2.chr16 64972800 0 + 75148670 C a score=2545.000000 s hg38.chr17_JH159148v1_alt 68871 1 + 88070 A s panTro5.chr17 16373885 1 + 83181570 A i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296077 1 + 83442489 A i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131494 1 + 4267968 A i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115696 1 - 2193130 A i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176185 1 - 77216781 A i rheMac8.chr16 I 195 C 0 s macFas5.chr16 28086300 1 - 80997621 A i macFas5.chr16 C 0 I 195 s macNem1.NW_012014910v1 2132725 1 + 10377808 A i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039510 1 - 8458610 A i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2234530 1 + 4244037 A i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243786 1 + 4569836 A i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1902970 1 + 3513951 T i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10799 1 - 4077172 A i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16854 1 - 94492 T i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 632006 1 - 852752 G i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22899798 0 + 28711273 C e chlSab2.chr16 64972800 0 + 75148670 C a score=15690.000000 s hg38.chr17_JH159148v1_alt 68872 2 + 88070 AG s panTro5.chr17 16373886 2 + 83181570 AG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296078 2 + 83442489 AG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131495 2 + 4267968 AG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115697 2 - 2193130 AG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176186 2 - 77216781 AG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086496 2 - 80997621 AG i macFas5.chr16 I 195 C 0 s macNem1.NW_012014910v1 2132726 2 + 10377808 AG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039511 2 - 8458610 AG i cerAty1.NW_012006043v1 C 0 I 141 s manLeu1.NW_012106252v1 2234531 2 + 4244037 AG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243787 2 + 4569836 GG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1902971 2 + 3513951 GG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10800 2 - 4077172 AG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16855 2 - 94492 GG i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 632007 2 - 852752 AG i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22899798 0 + 28711273 C e chlSab2.chr16 64972800 0 + 75148670 C a score=513432.000000 s hg38.chr17_JH159148v1_alt 68874 50 + 88070 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTACAG s panTro5.chr17 16373888 50 + 83181570 GCTGGTAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTACAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296080 50 + 83442489 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGATCCTGCAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131497 50 + 4267968 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCAAA---CAGGTGGGCTGGCAGCAGGTGGTCCTGCAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115699 50 - 2193130 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTGCAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176188 50 - 77216781 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTTCTACAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086498 50 - 80997621 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTTCTACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132728 50 + 10377808 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTTCTACAG i macNem1.NW_012014910v1 C 0 I 126 s cerAty1.NW_012006043v1 2039654 50 - 8458610 GCTGACAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTACAG i cerAty1.NW_012006043v1 I 141 C 0 s chlSab2.chr16 64972800 39 + 75148670 -----------CT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTACAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234533 50 + 4244037 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243789 150 + 4569836 GCTGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAGGTGGTCCTACAGCAGGTGTTTTGACAACAAGTTGGGCGGTAGCAAGGCTGACAACAGCTGGACACACAGCCGGAGGGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTACAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1902973 50 + 3513951 TCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTTCCAGCAGGTGGTCCTGCAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10802 50 - 4077172 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAGCAGGTGGTCCTGCAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16857 50 - 94492 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---CAGGTGGGCTGGCAACAGGTGGTCCTGCAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899798 53 + 28711273 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGACACACAGCAGCTGGGCTGGCAGCAGGGTGTGCTACAG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 632009 50 - 852752 GCTGGCAGCAGCT----------------------------------------------------------------------------------------------------GGTCACA---AAGGTTGGCTGGCAGTAGGTGGTCCTACAG i dasNov3.JH570468 C 0 C 0 a score=171548.000000 s hg38.chr17_JH159148v1_alt 68924 15 + 88070 CAGGTGTTTTGACAG s panTro5.chr17 16373938 15 + 83181570 CAGGTGTTTTGACAG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296130 15 + 83442489 CAGGTGTTTTGACAG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131547 15 + 4267968 CAGGTGTTTTGACAG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115749 15 - 2193130 CAGGTGTTTTGACAG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176238 15 - 77216781 CAGGTGTTTTGACAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086548 15 - 80997621 CAGGTGTTTTGACAG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132904 15 + 10377808 CAGGTGTTTTGACAG i macNem1.NW_012014910v1 I 126 C 0 s cerAty1.NW_012006043v1 2039704 15 - 8458610 CAGGTGTTTTGACAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972839 15 + 75148670 CAGGTGTTTTGACAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234583 15 + 4244037 CAGGTGTTTTGACAG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243939 15 + 4569836 CAGGTGTTTTGACAG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1903023 15 + 3513951 CAGGTGTTTTGACAG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10852 15 - 4077172 CAGGTGTTTTGACAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16907 15 - 94492 CAGGTGTTTTGACAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899851 13 + 28711273 CAGGTG--GTGACAG i otoGar3.GL873537 C 0 I 123 s dasNov3.JH570468 632059 15 - 852752 CAAGTGGTCTGACAA i dasNov3.JH570468 C 0 C 0 a score=475900.000000 s hg38.chr17_JH159148v1_alt 68939 47 + 88070 CAAGTTGggcggcagcaaggctggcagcagctggacacacagcaggc s panTro5.chr17 16373953 47 + 83181570 CAAGTTGGGCAGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296145 47 + 83442489 CAAGCTGGGTGGCAGCAAGGCTGGCAGCAGCTAGACACACAGCAGGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131562 47 + 4267968 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115764 47 - 2193130 CAAGTTGGGTGACAGCAAGGCTGGCAACAGCTGGACACACAGCAGGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176253 47 - 77216781 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086563 47 - 80997621 CACGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132919 47 + 10377808 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039719 47 - 8458610 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972854 47 + 75148670 CAAGTTGGGCGGCAACAAGGCTGGCAACAGCTGGACACACAGCAGGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234598 47 + 4244037 CAAGTTGGGCGGCAGCAAGGCTGGCAACAGCTAGACACACAGCAGGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2243954 47 + 4569836 CAAGTTGGGCGGCAGCAAGGCTGGCAACAGCTGGACACACAGCAGGA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1903038 47 + 3513951 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10867 47 - 4077172 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16922 47 - 94492 CAAGTTGGGCGGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGA i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 632074 39 - 852752 CAGAGTGGGCGGCAGCAAGGCTGGCAGCAACTGGACCCA-------- i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22899864 123 + 28711273 I a score=135420.000000 s hg38.chr17_JH159148v1_alt 68986 12 + 88070 gggctggcagca s panTro5.chr17 16374000 12 + 83181570 GGGCTGGCAGCA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296192 12 + 83442489 GGGCTGGCAGCA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131609 12 + 4267968 GGGCTGGCAGGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115811 12 - 2193130 GGGCTGGCAGCA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176300 12 - 77216781 GGGCTGGCAGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086610 12 - 80997621 GGGCTGGCAGCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132966 12 + 10377808 GGGCTGGCAGCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039766 12 - 8458610 GGGCTGGCAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972901 12 + 75148670 GGGCTGGCAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234645 12 + 4244037 GGGCTGGCAGCA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244001 12 + 4569836 GGGTTGGCAGCA i colAng1.NW_012122154v1 C 0 I 1 s saiBol1.JH378271 1903085 12 + 3513951 GGGCTGGCAGCA i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10914 12 - 4077172 GGGCTGGCAGCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16969 12 - 94492 GGGCTGGCAGCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899987 12 + 28711273 GGGCTGGCAGCA i otoGar3.GL873537 I 123 C 0 e dasNov3.JH570468 632113 0 - 852752 C a score=10500.000000 s hg38.chr17_JH159148v1_alt 68998 1 + 88070 g s panTro5.chr17 16374012 1 + 83181570 G i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296204 1 + 83442489 G i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131621 1 + 4267968 G i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115823 1 - 2193130 G i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176312 1 - 77216781 G i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086622 1 - 80997621 G i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132978 1 + 10377808 G i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039778 1 - 8458610 G i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972913 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234657 1 + 4244037 G i manLeu1.NW_012106252v1 C 0 C 0 s saiBol1.JH378271 1903097 1 + 3513951 G i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 10926 1 - 4077172 G i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16981 1 - 94492 G i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22899999 1 + 28711273 G i otoGar3.GL873537 C 0 C 0 e dasNov3.JH570468 632113 0 - 852752 C e colAng1.NW_012122154v1 2244013 1 + 4569836 I a score=56010.000000 s hg38.chr17_JH159148v1_alt 68999 5 + 88070 gGTGT s panTro5.chr17 16374013 5 + 83181570 GGTGT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296205 5 + 83442489 GGTGT i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131622 5 + 4267968 GGTGT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115824 5 - 2193130 GGTGC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176313 5 - 77216781 GGTGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086623 5 - 80997621 GGTGT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132979 5 + 10377808 GGTGT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039779 5 - 8458610 GGTGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972914 5 + 75148670 GGTGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234658 5 + 4244037 GGTGT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244014 5 + 4569836 GGTGT i colAng1.NW_012122154v1 I 1 C 0 s saiBol1.JH378271 1903098 5 + 3513951 GGTGT i saiBol1.JH378271 C 0 T 15343 s cebCap1.NW_016107543v1 10927 5 - 4077172 GGTGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 16982 5 - 94492 GGTGT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22900000 5 + 28711273 GGTGT i otoGar3.GL873537 C 0 C 0 e dasNov3.JH570468 632113 0 - 852752 C a score=289795.000000 s hg38.chr17_JH159148v1_alt 69004 31 + 88070 GCTGCT---------------------------GCAGGTGGTCACAGTGGTGGGCTTC s panTro5.chr17 16374018 31 + 83181570 GCTGCT---------------------------GCAGGTGGTCACAGTGGTGGGCTTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296210 31 + 83442489 GCTGCT---------------------------GCAGGTGGTCACAGTGGTGGGCTGC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131627 31 + 4267968 GCTGCT---------------------------GCAGGTGGTCACAGTGGTGGGCTTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115829 31 - 2193130 GCTGCT---------------------------GCAGGTGGTCACAGTTGTGGGCTTC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176318 31 - 77216781 GCTGCT---------------------------GCAGGTGGTCACACAGGTGGGCTTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086628 31 - 80997621 GCTGCT---------------------------GCAGGTGGTCACACAGGTGGGCTTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2132984 31 + 10377808 GCTGCT---------------------------GCAGGTGGTCACACAGGTGGGCTTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039784 31 - 8458610 GCTGCT---------------------------GCAGGTGGTCACACAGGTGGGCTTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972919 31 + 75148670 GCTGCT---------------------------GCAGGTGGTCACACAGGTGGGCTTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234663 31 + 4244037 GCTGCT---------------------------GCAGGTGGTCACACAGGTGGGCTTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244019 31 + 4569836 GCTGCT---------------------------GCAGGTGGTCACAGTGGTGGGCTTC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1887760 31 + 3513951 GCTGCT---------------------------GCAGCTGGTCACACAGGTGGGCTTC i saiBol1.JH378271 T 15343 C 0 s cebCap1.NW_016107543v1 10932 31 - 4077172 GCTGCT---------------------------GCAGCTGGTCACACAGGTGGGCTTC i cebCap1.NW_016107543v1 C 0 I 12237 s aotNan1.NW_018505111v1 16987 58 - 94492 GCTGCTGCATGTGGTCACACAGGTGGGCTGGCAGCAGCTGGTCGCACAGGTGGGCTTC i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22900005 31 + 28711273 GCTGCA---------------------------GCAGGTGGTCTCACAGGTGGGCTGC i otoGar3.GL873537 C 0 C 0 e dasNov3.JH570468 632113 0 - 852752 C a score=4004978.000000 s hg38.chr17_JH159148v1_alt 69035 399 + 88070 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCAGGTAGGCTGACAGCAAGGGGAGCAACAGTGGGTCATGGTGTCAGGGGTGGAGGGTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACATCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTACACTGTTTTCCATACTCCCTTTGCGA--TTGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTTTTGAAAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA s panTro5.chr17 16374049 398 + 83181570 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCATGTAGGCTGACAGCAAGGGGAGCAACAGTGGGTCATGGTGTCAGGGGTGGAGGGTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACATCTGGCCTCCAA-TTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTACACTGTTTTCCATACTCCCTTTGCGA--TTGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTTTTGAAAGTAAGGGTTTAATCTGTTTTTTAATTGAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCACCAGCATCATCCCTGCTCTGACCATCATCTGGTCATGTGA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296241 383 + 83442489 ---------------CAGCAGGTGGTCCTGCAGCATGTAGGCTGACAGCAAGGGGAGCAACAGTGGGTCATGGTGTCAGGGGTGGAGGGTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACATCTGGCCTCCAA-TTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTACACTGTTTTCCATACTCCCTTTGCGA--TTGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTTTTGAAAGTAAGGGTTTAATCTGTTTTTTAATTGAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCACCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4131658 397 + 4267968 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCATGTAGGCTGACAGCAAGGGCAGCAACAGTGGGTCATGG-GTCAGGGGTGGAGGGTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACATCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTACACTGCTTTCCATACTCCCTTTGGGA--TTGTCAAAGGGGAAGTTG-TTCTG--AAATCTTATGAATCTTTTGAAAGTAAGGGTTTAATCTGTTTTTTAATTGAGAATTACTCATGAAAACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGTTCTGACCATCATCTGGTCATGTGA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2115860 398 - 2193130 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGACAGCAAGGGGAGCAACAGTGGGTCATGGTGTCAAGGGTGGAGGGTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCCACTTATCTTGTTTTCCACAGTCCGTTTGTGA--TTTTCAAAGGGT-AGTTGTTTCTG--AAATCTTATGAATCTTTCGAAAGTAAGGGTTTAATCTGTTTTTTAATTGAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176349 395 - 77216781 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGACAGCAAGGGGAGCAACAGTTGGTCATGGTGTCAGGGGTGGAAGGTGGGCTTCTATTCAGAGGTGAGTTTCCCAGAATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTTCATACTCTCTTTGCGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAGTGTTTAATC----TGTTAATTGAGAATTACTCATAAAAACTTCGTTTCAGATAAAAGGAAGTCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28086659 399 - 80997621 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGACAGCAAGGGGAGCAACAGTTGGTCATGGTGTCAGGGGTGGAAGGTGGGCTTCTATTCAGAGGTGAGTTTCCCAGAATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTTCATACTCCCTTTGCGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAGTGTTTAATCTGTTTGTTAATTGAGAATTACTCATAAAAACTTCGTTTCAGATAAAAGGAAGTCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133015 399 + 10377808 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGACAGCAAGGGGAGCAACAGTTGGTCATGGTGTCAGGGGTGGAAGGTGGGCTTCTATTCAGAGGTGAGTTTCCCAGAATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTTCATACGCACTTTGCGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAGTGTTTAATCTGTTTGTTAATTGAGAATTACTCATAAAAACTTCGTTTCAGATAAAAGGAAGTCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCCCGTCATGTGA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2039815 399 - 8458610 CAGCAGGTGGTCCTGCAGCAGGTGGTTCTGCAGCACGTAGGCTGGCAGCAAGGGGAGCAACAGTGGGTCATGGTGTCAGGGGTGGAGGGTGGGTTTCTATTCAGAGGTGAGTTTCCCAGAATGTGATGACCCCTGGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCATCAGGACTTTTTCTTGTTGCTGTTTACATTGTTTTTCATACTCCCTTTGCGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAGTGTTTAATCTGTTTGTTAATTGATAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAATCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCCGGTCATGTGA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64972950 399 + 75148670 CAGCAGGTGGTCCTGCAGCAGGTGGTCCGGCAGCACGTAGGCTGGCAGCAAGGGGAGCAACAGTGGGTCATGGTGTCAGGGGTGGACGGTGGGTTTCTATTCAGAGGTGAGTTTCCCAGAATCTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTTCATACTCCCTTTGTGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAGTGTTTAATCTGTTTGTTAATTAAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAATCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2234694 399 + 4244037 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGGCAGCAAGGGGAGCAACAGTTGGTCATGGTGTCAGGGGTGGAGGGTGGGTTTCTATTCAGAGGTGAGTTTCCCAGGATGTGATGACCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCATCAGGACTTTTTCTTGTTGCTGTTTACATTGTTTTTCATACTCCCTTTGCGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAATGTTTAATCTGTTTGTTAATTGAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAATCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCCGGTCATGTGA i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244050 384 + 4569836 CAGCAGGTGGTCCT---------------GCAGCACGTAGGCTGGCAACAAGGGGAGCAACAGCGGGTCATGGTGTCAGGGGTGGAGGGTGGGCTTCTATTCAGAGGTGAGTTTCCCAGAATCTGATGATCCCTTGCAATCTGGACCTTTTATACACCTGGCCTCCAAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGTTTTTCATACTCCCTTTGCGA--TCGTCAAAGGGGAAGTTGTTTCTG--AAATCTTATGAATCTGTTGAAAGTAAGTGTTTATTCTGTTTGTTAATTGAGAATTACTCATAAAAACTTTGTTTCAGATAAAAGGAAATCAGTCTCATTATCAGCATCATTCCTGCTCTGACCATCATCTGGTCATGTGA i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1887791 398 + 3513951 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGGCAGCAAGGGGAGCAGCAGTGGGTCATGGTGTCAGGGGTGAACGGTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAATATGGTGACTCCTTCCAATCTGGACCTTTTATACACCTGGCCTCTGAAGTTTCCACCAATCAGCAGGACATTTCCTTGTTGCTGTTTACATTGTTTTCTACAGTCAGTTTGGGA--TTATCCAAGGGGAAGTTGCTTCTG--AAATCTGATGAATTTTTTAAAAGTAA-GGTTTAATCTGTTTCTTAATTGATAATTTGTCATAGAGACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGCTCTGACCTTCATCTGGTCATGTGA i saiBol1.JH378271 C 0 I 2 s cebCap1.NW_016107543v1 23200 399 - 4077172 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGGCAGCAAGGGGAGCAGCAGTAGGTCATGGTGTCAGGGGTGGAGGGTGGGCTTCTGTTCAGAGGTGAGTTTCCCAGAATCTGGTGACCCCTTCCCATCTGGACCTTTTATCCACCTGGCCTCTGAAGCTTCCACCAATCAGCAGGACTTTTCCTTGTTGCTGTTTACATTGCTTTCAACAGTCTGTTTAGGA--TTGTCAAAGGGGAAGTTGCTTCTG--AAATCTGGTGAATTTTTTAAAAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATTAGTCATAGAGACTTTGTTTCAGATAAAAGGAAGGCAGTCTCATCATCAGCACCATTCCTGCTCTGACCTTCATCTGGTCATGTGA i cebCap1.NW_016107543v1 I 12237 I 2 s aotNan1.NW_018505111v1 17045 399 - 94492 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAGCACGTAGGCTGGCAGCAAGGGGAGCAGCAGTGGGTCATGGTGTCAGGGGTGGAGGGTGGGCTCCTGTTCAGAGGTGAGTTTCCCAGAATTTGATGACCCCTTCCAATCTGGACCTTTTATACACCTGGCCTCCGAAGTTTCCACCAATCAGCAGGACTTTTCCTTGTTGTTGTTTACATTGTTTTCTACAGTCAGTTTGGGA--TTGTCAAAGGGGAAGTTGCTTCTG--AAATCTGATTAACTTTTTAAAAGTAAGGGTTTAATCTGTTTCTTAATTGAGAATTAGTCATAGAGACTTTGTTTCAGATACAAGGAAGGCAGTCTCATCATCAGCATCATTCCTGCTCTGACCTTCATCTGGTCACGTGA i aotNan1.NW_018505111v1 C 0 I 24 s otoGar3.GL873537 22900036 392 + 28711273 CAGCAGGTGGTCCTGCAGCAGGTGGTCCTGCAACATGTGGGCTGGCAACAAGGGGAGCAACAGTGGGTCATGGTGTC-TGTGTGGAGGGTGGGTTCCTGTTCAGAGGTGAGTTTCCCAGAATCTGCTGATGTCTTCCAATGTTGACCTTTTATACACTGGGCCTCTGATGTTTGGACCAATCAGCAGAATTTTTCCTTGTAG---TTTACAATGTTTTTCATAATCAATGGGTGAATTAATAAAGTGGGAAGTTGTTTCCT--AAGTGTTAAGAATCTTTCAGAAGT----GTTTGATCTGTTTCTTAATTGAGAATAACTCCTAGAAACTGT-TTTCAGATACAAGGAAAGTGATCACATCATCAGCATTTTTTCTGCTCTGGTCACTATGTGGTCATGTCA i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 632113 372 - 852752 ---------------CAAGAACTGGACCCACAGCAGGTGGGCTGGCAGCAGGGAGAGCAGCAGGAGGTCATGGCGTGGTGGGTGGAGA--GGGTTCGTGTTCAGAG--GGGTTTCCCAGAATCTGATGGCTCCTTTAATTCTGCATCTTTTATACACTGAGCCCC--AATATTTGACCAATCAGCAGGTCTTTTCCTTATTATTG---ACATTGTTTT-CATAAATAGTGGGCAAA-TTATCAAGGAGGATGTT-TTCCTGCAAAGTGTTATTAATCTTTCCAAAGTAAGTGTTTAATCATTTTCATAATTGGGA--CATTTATAGAAATATT-TTTCGTTTATGAAGAAGGTGGTCACATCCTCACCATCCTTCCTGCCCCAGTCATCATCT-GTCATGTGA i dasNov3.JH570468 C 0 C 0 a score=175519.000000 s hg38.chr17_JH159148v1_alt 69434 22 + 88070 TAGTTCCTGGTGATCCGGGAAG s panTro5.chr17 16374447 22 + 83181570 TAGTTCCTGGTGATCCGGGAGG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296624 22 + 83442489 TAGTTCCTGGTGATCCGGGAGG i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132055 22 + 4267968 TAGTTCCTGGTGATCCAGGAGG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116258 22 - 2193130 TAGTTCCTGGTGATCCGGGAGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30176744 22 - 77216781 TAGTTCCTGGTGATGTGGGAGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087058 22 - 80997621 TAGTTCCTGGTGATGTGGGAGG i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133414 22 + 10377808 TAGTTCCTGGTGATGTGGGAGG i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040214 22 - 8458610 TAGTTCCTGGTGATCCGGGAGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973349 22 + 75148670 TAGTTCCTGGTGATCCGGGAGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235093 22 + 4244037 TAGTTCCTGGTGATCCGGGAGG i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244434 22 + 4569836 TAGTTCCTGGTGATCCGGGAGG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1888191 20 + 3513951 GAGTTCCTGTGG--CTGGGAGG i saiBol1.JH378271 I 2 I 2 s cebCap1.NW_016107543v1 23601 20 - 4077172 GAGTTCCTGTGG--TGGGGAGG i cebCap1.NW_016107543v1 I 2 I 2 s otoGar3.GL873537 22900428 22 + 28711273 TAATTCCTGCTGGCCTGGGAGG i otoGar3.GL873537 C 0 I 2 s dasNov3.JH570468 632485 22 - 852752 TAGTTCCTGCTGGCCTGAGGAG i dasNov3.JH570468 C 0 I 3 e aotNan1.NW_018505111v1 17444 24 - 94492 I a score=1390025.000000 s hg38.chr17_JH159148v1_alt 69456 146 + 88070 C--AGATAGTTCTCTCTGTCCAGCCTCAT--GGTTG-ACTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGTTATGTTCACAGTGATGCATTGAATCCGTGCCCGGCACCAAGCCTATTTACCCACAAA-AGTCTGATTC s panTro5.chr17 16374469 146 + 83181570 C--AGATAGTTCTCTCTGTCCAGCCTCAT--GGTTG-ACTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATGTTCACAGTGATGCATTGAATCCGTGCCCGGCACCAAGCCTATTTACCCACAAA-AGTCTGATTC i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296646 146 + 83442489 C--AGATAGTTCTCTCTGTCCAGCCTCAT--GGTTG-ACTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATGTTCACAGTGATGCATTGAATCCGTGCCCGGCACCAAGCCTATTTACCCACAAA-AGTCTGATTC i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132077 146 + 4267968 C--GGATAGTTCTCTCTGTCCAGCCTCAT--GGTTG-ACTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATGTTCACAGTGATGCATTGAATCCGTGCCCGGCACCAAGCCTATTTACCCACAAA-AGTCTCATTC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116280 146 - 2193130 C--AGATAGTTCTCTCTGTCCAGCCTCAT--GGTTG-ACTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATGTTCACAGTGACGCATTGAATCTGTGCCCGGCACCAAGCCTATTTACCCACAGA-AGTCTGATTC i nomLeu3.chrUn_GL397460_1 C 0 I 279 s rheMac8.chr16 30176766 146 - 77216781 C--AGATAGTTCTCTCTGCCCCGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCGGCCCCAAGCCTGTTCACCCACAAA-AGTCTAATTC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087080 146 - 80997621 C--AGATAGTTCTCTCTGCCCCGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCGGCCCCAAGCCTGTTCACCCACAAA-AGTCTAATTC i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133436 146 + 10377808 C--AGATAGTTCTCTCTGCCCCGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCGGCCCCAAGCCTGTTCACCCACAAA-AGTCTAATTC i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040236 146 - 8458610 C--AGATAGTTCTCTCTGCCCCGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTTGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCAGCCCCAAGCCTGTTCACCCACAAA-AGTCTAATTC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973371 148 + 75148670 CTCAGGAAGTTCTGTCTGCCCAGTCTCAT--AGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCGGCCCCAAGCCTGTTCACGCACAAA-AGTCTAATTC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235115 143 + 4244037 C-----AGATACTCTCTGCCCTGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCAGCCCCAAGCCTGTTCACCCACAAA-AGTCTAATTC i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244456 147 + 4569836 C--AGATAGTACTCTCTGCCCCGCCTCAT--GGTTG-GCTGTATGTAGACTGGGAAATGTCTGTGGGCAGTCGCGTGATGCTGATATATTCACAGTGATGCATTGAATCCATGCCCGGCCCCAAGCCTGTTCACGCACAAAGAGTAATGTTC i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1888213 146 + 3513951 C--AGAAAGTTCTCTCTGCCCAGCCTCAT--GTTTG-ACTGTATGCAGACTGGGAGGTGTCTGTGGGCAGGGGCGTGATGCTGATATGTTCACAATGATGAATTGAATCCATGCCTGGTTCCAAGCCTGTTCACCCACAAA-AGTCTGATTC i saiBol1.JH378271 I 2 C 0 s cebCap1.NW_016107543v1 23623 146 - 4077172 C--AGGAAGTTCTCTCTGCCCAGCCTCAT--GTTTG-ACCGTATGCAGACTGGGAGGTGTCTGTGGGCAGGGGCATGATGCTGATATGTTCACAACGATGAATTGAATCCATGCCTGGCCCCAAGCTTGTTCACCCACAAA-AGTCTGATTC i cebCap1.NW_016107543v1 I 2 C 0 s aotNan1.NW_018505111v1 17468 145 - 94492 C--AGGAAGTTCTCTCTGCCCAGCCTCAT--GTTTG-ACTGTATGCAGA-TGAGAAGTGTCTGTGGGCAGGGGTGTGATGCTGGTATGTTCACAATGATGAATTGAATCCATGCCTGGCCCCAAGCCTATTCACCCACAAA-AGTCTGATTC i aotNan1.NW_018505111v1 I 24 C 0 s otoGar3.GL873537 22900452 146 + 28711273 C--CGGAAGTTCTCTCTGTCCTTCCTGTT--GGTTTCCCTGCATGTATATTGGGAAATGTCTATGGGGAGG-GCATGGTACTGATATGTGCAGGTTGTTGAATTGAATCCATGCTTTGGTCCAAGTTTGTTTACCTCCAAA-AGCCTGAGTG i otoGar3.GL873537 I 2 C 0 s dasNov3.JH570468 632510 144 - 852752 C--TTACCTTTTTCTCTCCCCAGTTTTATTCATTTG-ACTGT---CAGATTGCCAGGTGCACCTGGGGGTGTGCATGATGCTGATACGTTCCCTGTGACAAACGGGATCCCTGCCTGGGTCCAAATCTGTTCACCCACAA--AGCCTGATTC i dasNov3.JH570468 I 3 C 0 a score=1987944.000000 s hg38.chr17_JH159148v1_alt 69602 229 + 88070 -AAG----AGTAACAAGCATCTTTC----TCGCTACAAACTATTCCACCTGTGTCTTCCAGTTCTATTACACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTATTCCAAAATGCGGAGCTAGACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCGAGT-GTCTCTGTGATGGTGTTGCCATTTACcctgatttgcctgggactgaagggtttaccagca--------tg s panTro5.chr17 16374615 229 + 83181570 -AAG----AGTAACAAGCATCTTTC----TTGCTACAAACTATTCCACCTGTGTCTTCCAGTTCTATTACACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTATTCCAAAATGCAGAGCTAGACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCAAGT-GTCTCTGTGATGGTGTTGCCATTTACcctgatttgcctgggactgaagggtttaccagca--------tg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16296792 229 + 83442489 -AAG----AGTAACAAGCATCTTTC----TCGCTACAAACTATTCCACCTGTGTCTTCCAGTTCTATTACACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTATTCCAAAATGCAGAGCTAGACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCAAGT-GTCTCTGTGATGGTGTTGCCATTTACcctgatttgcctgggactgaagggtttaccagca--------tg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132223 228 + 4267968 -AAG----AGTAACAAGCATCTTTC----TCGCTAC-AACTATTCCACCTGTGTCTTCCAGTTCTATTACACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTGTTCCAAAATGCAGAGCTAGACCCAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCAAGT-GTCTCTGTGATGGTGTCGCCATTTACcctgatttgcctgggactgaagggtttaccagca--------tg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116705 229 - 2193130 -aaG----AGTAACAAGCATCTTTC----TGGCTACAACCTATTCCACCTGTGTCTTCCAGTTCTATTAAACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTGTTCCAAAATGCAGAGCTAGACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCAAGT-GTCTCTGTGATGGTGTTGCCGTTTACTctgatttgcctgggactgaagggtttaccagca--------tg i nomLeu3.chrUn_GL397460_1 I 279 C 0 s rheMac8.chr16 30176912 238 - 77216781 -AAG----AGTAACAAGCATCTTTC----TCGCTACAACCTACTCCCTCTGTGTCTTCCAGTTCTCTTAAACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCACCAAATGGTTTCCGTGATGGTgtggccatttatcccgatttgcctgtgactgagaggtttaccagcatgagaatgtg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087226 238 - 80997621 -AAG----AGTAACAAGCATCTTTC----TCGCTACAACCTACTCCCTCTGTGTCTTCCAGTTCTCTTAAACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCACCAAATGGTTTCCGTGATGGTgtggccatttatcccgatttgcctgtgactgagaggtttaccagcatgagaatgtg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133582 238 + 10377808 -AAG----AGTAACAAGCATCTTTC----TTGCTACAACCTACTCCCTCTGTGTCTTCCAGTTCTCTTAAACTCAC-TAGGGAAAGGGTGTTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCACCAAATGGTTTCCGTGATGGTgtggccatttatcccgatttgcctgtgactgagaggtttaccagcatgagaatgtg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040382 238 - 8458610 -AAG----AGTAACAAGCATCTTTC----TCGCTACAACCTACTCCCCCTGTGTCTTCCAGTTCTCTTAAACTCAC-TGGGGAAAGGGTGTTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCACCAAATGGTTTCTGTGATGGTGTGGCCATTTATCCCGATTTGCCTGTGACGGAGAGGTTTACCAGCATGAGAATGTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973519 238 + 75148670 -AAG----AGTAACAAGCATCTTTC----TCGCTACAACCTACTCCCCCTGTGTCTTCCAGTTCTCTTAAACTCAC-TGGGGAAAGGGTGTTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCAAATGGTTTCTGTGATGGTGTGGCCATTTATCCCGATTTGCCTGTGACTGAGAGGTTTACCAGCATGAGAATGTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235258 238 + 4244037 -AAG----TGTAACAAGCATCTTTC----TCGCTACAACCTACTCCCCCTGTGTCTTCCAGTTCTCTTAAACTCAC-TGGGGAAAGGGTGTTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCGAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCACCAAATGGTTTCTGTGATGGTgtggccatttatcccgatttgcctgtgactgagaggtttaccagcatgagaatgtg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244603 238 + 4569836 -AAG----AGTAACAAGCATCATTC----TCGCTACAACCTACTCCCCCTGTGTCTTCCAGTTCTCTTAAACTCAC-TGGGGAAAGGGTATTTGGCACAATGTGTTGCAAAATGCAGAGCTACACCAAAGCAGGTGGGTAGAAAAAGG---AG---TCCACTGGGAT---TCAGAAAGCATCAAATGGTTTCTGTGATGGTgtggccatttatcctgatttgcctgtaattgagaggtttaccagcatgagaatgtg i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1888359 245 + 3513951 -AAG----AGTAACAGGCATCTCTCTCTTTCTCTCCAACCTACTCCACCTGTGTCTTCCAGTTCTATCAAACTCACTTGGGAAAAGGGTGTTTGGCACAATGTGTTCCAAGATGCAGAGCCAGACCAAAGCAGGTAGGTAGACAAAGG---GG---TCCACTGAGATTCATCAGAAAGCATCAGATGGTCTCTGTGGTGGTGTGACCATTTATCCCGATTTGCCTGGGACTTACAGG-TTACCAGCATGAGAATGTG i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 23769 236 - 4077172 -AAG----AGTAACAGGCATCTCTC----TCTCTCCACCCTACTCCACC--TGTCTTCCAGTTCTATCAAACTCACTTGGGAAAAGGGTGTTTGGCACAATGTATTCCAAGATGCAGAGCCAGACCAAAGAAAGTGTGTAGACAAAGG---AG---TCCACTGAGAT---TCAGAAAGCATCAGATGGTCTCTGCGGTGGTGTGACCATTTATCCTGATTTGCCTGGGACTGACAGG-TTACCAGCATGAGAATGTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 17613 242 - 94492 -AAG----AGTAACAGGCATCTCTCTCCTTCTCTCCAACCTACTCCACCTGTGTTTTCCAGTTCTATCAAACTCACTTGGGAAAAGGGTGTTTGGCACAATGTGTTCCAAGATGCAGAGCCAGACCAAAGCAGGTGGGTAGACAAAGG---AG---TCCACTGAGAT---TCAGAAAGCATCAAATGGTCTCTGTTGTGGTgtgaccgtttatcccaatttgcctgggactgacagg-ttaccagcatgagaatgtg i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22900598 221 + 28711273 -AAC----ACTAACAGCTATCTCTC----TCTGTAGAACCTACTCCAGAGGTTTATCCCAGTTCTATGAATGACAGTTGGGAAGAAGATATTTTTTACAATCTGTTCCATGTGGCAGAGAGGAGCCATATTAGGTTGATAGGAGGAGAGTTAG---TATTCTGGGAC---TAAGAAGGTATCA----GTTTGTG-------GGTGACATTCACCTGTATTTGGCT----------GGCTTACAAAGATGAGAATGTG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 632654 236 - 852752 AAAGCTACAACAACAGGCTTTTTTTTTTTTCTGTGGCACCCACCTCTGCT-TGTATCAAATATCAAAGATATTTGC-TTGGAGAA---TGTTCAGCAGAATTTCTTCCATATGGAAATTCACAAGCAAAACAGGAGGATTGAAGCAGG---AGAATTACATTGGTAT---TCAGAAAGTTTCAATCCGTTTGCATCGTGGAGT--TCCACCATCCTTGTTTTACCATGGCTGTGGGGTTCCCCACAATG-------- i dasNov3.JH570468 C 0 I 2779 a score=414143.000000 s hg38.chr17_JH159148v1_alt 69831 46 + 88070 ggactctctgtgacgtaagtgctctagattcgggcaaatcaagctg s panTro5.chr17 16374844 46 + 83181570 ggactctctgtgACGTAAGTGCTCTAGATTCGGGAAAATCAAGCTG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297021 46 + 83442489 ggactctctgtgatgtaagtgctctagattcgggcaaatcaagctg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132451 46 + 4267968 ggactctctgtgatgtaagtgctctagattcgggcaaatcaggctg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116934 46 - 2193130 ggactctctgtgACGTAAGTGCTCTAGATTCGGGCAAATTAAGCGG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177150 46 - 77216781 ggactctgtgcgacataagtgctctagattcgggcaaatcaagctg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087464 46 - 80997621 ggactctgtgcgacataagtgctctagattcgggcaaatcaagctg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133820 46 + 10377808 ggactctgtgcgacataagtgctctagattcgggcaaatcaagctg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040620 46 - 8458610 GGACTCTGTGCGACATAAGTGCCCTAGATTCGGGCAAATCAAGCTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973757 46 + 75148670 GGACTCTGTGCGACATAAGTGCTCTAGATTCGGGCAAATCAAGCTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235496 46 + 4244037 ggactctgtgcgacataagtgctgtagattcgggcaaatcaagctg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244841 46 + 4569836 ggactctgtgtgatataagtgctctagattcgggcaaatcaagctg i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1888604 43 + 3513951 GAACTCTCTGTGACATAAGTGCTCTAGATTTGGGCAAATCAAG--- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 24005 46 - 4077172 GAACTCTTTGTGATATAGGTGCTCTAGATTTGGGCAAATCAAGCTG i cebCap1.NW_016107543v1 C 0 I 5287 s aotNan1.NW_018505111v1 17855 46 - 94492 gaactctctgtgACATAAGTGCTCTAGATTTGGGCAAATCAAGCTG i aotNan1.NW_018505111v1 C 0 I 4966 s otoGar3.GL873537 22900819 46 + 28711273 TGAGTTTCTGTAATACACTTACCATAGATCCAGACAAATCCAGATG i otoGar3.GL873537 C 0 C 0 e dasNov3.JH570468 632890 2779 - 852752 I a score=112743.000000 s hg38.chr17_JH159148v1_alt 69877 16 + 88070 agtt-ctggtcCTAGct s panTro5.chr17 16374890 16 + 83181570 AGTT-CTGGTCCTAGCT i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297067 16 + 83442489 agtt-CTGTTCCTAGct i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132497 16 + 4267968 agtt-ctggtcCTAGct i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116980 16 - 2193130 AGTT-CTGGTCCTAGct i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177196 16 - 77216781 agtt-ctggtcCTAGCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087510 16 - 80997621 agtt-ctggtcCTAGCT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133866 16 + 10377808 agtt-ctggtcCTAGCT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040666 16 - 8458610 AGTT-CTGGTCCTAGCT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973803 16 + 75148670 AGTT-CTGGTCCTAGCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235542 16 + 4244037 agtt-ctggtcCTAGCT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244887 16 + 4569836 agtt-ctggtcCTAGCT i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1888647 12 + 3513951 -----CTGGTCCTAGCC i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22900865 17 + 28711273 AGCTGGTGACACTAGCT i otoGar3.GL873537 C 0 T 45378 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I a score=6248.000000 s hg38.chr17_JH159148v1_alt 69893 2 + 88070 tg s panTro5.chr17 16374906 2 + 83181570 TG i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297083 2 + 83442489 tg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132513 2 + 4267968 tg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116996 2 - 2193130 tg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177212 2 - 77216781 TT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087526 2 - 80997621 TT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133882 2 + 10377808 TT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040682 2 - 8458610 TT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973819 2 + 75148670 TG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235558 2 + 4244037 TT i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244903 2 + 4569836 TG i colAng1.NW_012122154v1 C 0 C 0 s saiBol1.JH378271 1888659 2 + 3513951 TG i saiBol1.JH378271 C 0 T 14031 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e otoGar3.GL873537 22900882 45378 + 28711273 T a score=54767.000000 s hg38.chr17_JH159148v1_alt 69895 22 + 88070 ttaa---------ttctaatactttttgta-------------------t--------------------------------------------------------------------- s panTro5.chr17 16374908 23 + 83181570 TTAA---------TTCTAATACTTTTTATA------------------TT--------------------------------------------------------------------- i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297085 23 + 83442489 ttaa---------ttctaatactttttatt------------------at--------------------------------------------------------------------- i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132515 22 + 4267968 ttaa---------ttctaatactttttgta-------------------t--------------------------------------------------------------------- i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2116998 35 - 2193130 ttaagcttgctagttctaatactttttgta---------------ctttt--------------------------------------------------------------------- i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177214 34 - 77216781 TTGA---------TTCTAATACtttttgtattttgtgt-------ttttt--------------------------------------------------------------------- i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087528 37 - 80997621 TTGA---------TTCTAATACTTTTTGTATTTTGTGT----GTGTGTTT--------------------------------------------------------------------- i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133884 106 + 10377808 TTGA---------TTCTAATACtttttgtattttgtgt----ggtttttttttttttttttGGTGAGGGTGATATTATATTTTTTTTAAATTTAAAACATTAAATATTCCTTGCTGGTA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040684 36 - 8458610 TTGA---------TTCTAATACtttttgtattttgtg-----gttttttt--------------------------------------------------------------------- i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973821 34 + 75148670 TTGA---------TTCTAATACTTTTTGTATTTTGTG-------TGTTTT--------------------------------------------------------------------- i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235560 36 + 4244037 TTGA---------TTCTAATACtttttgtattttgtgt-----ttttttt--------------------------------------------------------------------- i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244905 41 + 4569836 TTGA---------TTCTAACACTTTTTGTATTTTGTGTGTGTGTGTTTTT--------------------------------------------------------------------- i colAng1.NW_012122154v1 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e otoGar3.GL873537 22900882 45378 + 28711273 T e saiBol1.JH378271 1888661 14031 + 3513951 T a score=2145741.000000 s hg38.chr17_JH159148v1_alt 69917 361 + 88070 ttttttttg---------------------------gtgtgac----agaaaattgcacatgtgcagtcatgactcataaaaaatagtaatagttttcttcgctttataagagtatttttaatcttgc--------------tttttttttggcccttgtccaggggtagaccctccagggcaatgtctaatagaatggtgtagtgtatatctttttatattcgttggatagaaaggagaactctcagtatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctattccttattttctgagagacagaaaactgaaaatgtactgaaatttacaaaatgctttttctttataagctgaaataatgttat s panTro5.chr17 16374931 361 + 83181570 TTTTTTTTG---------------------------GTGTGAC----AGAAAATTGTACATGTGCAGTCATGACTCATAAAaaatagtaatagttttcttcgctttataagagtatttttaatcttgc--------------tttttttttggcccttgtccaggggtagaccctccaggacaatgtctaatagaatggtgtagtgtatatctttttatatttgttggatagaaaggagaactctcagtatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctattccttattttctgagagacagaaaactgaaaatgtactgaaatttacaaaatgctttttctttataagctgaaataatgttat i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297108 361 + 83442489 ttttttttg---------------------------gtgtgac----agaaaattgtacatgtgcagtcatgactcataaaaaatagtaatagttttcttcgctttataagagtatttttaatcttgc--------------tttttttttggcccttgtccaggggtagaccctccaggacaatgtctaatagaatggtgtagtgtatatctttttatatttgttggatagaaaggagaactctcagtatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctattccttattttctgagagacagaaaactgaaaatgtactgaaatttacaaaatgctttttctttataagctgaaataatgttat i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132537 360 + 4267968 ttttttttg---------------------------gtgtgac----agaaaattgtacatgtgcagtcatgactcgtaaaaaatagtaatagttttctttgctttataagagtatttttaatcttgc---------------ttttttttggcccttgtccaggggtagaccctccaggacaatgtctgatagaatggtgtagtgtatatctttttatattctttggatagaaaggagaactctcagtatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctattccttattttctgagagacagaaaactgaaaatgtactgaaatttgcaaaatgctttttctttataagctgaaataatgttat i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117033 360 - 2193130 ttttttttg---------------------------ctgtgac----agaaaattgcacatgtgcagtcgtgactcgtaaaaaatagtaatagttttcttcgctttataagagtattttaaatcttgc---------------ttttttttggcccttgtccaggggtagaccctccaggacaatgtctaatagaatggtgtagtgtatgtctttttatattctttggatagaaaggagaactctcagtatttcacaattaattacaatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctattccttattttctgagagatagaaaactgaaaatatactgaaatttacaaaatgctttttctttataagctgaaatcatgttat i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177248 375 - 77216781 ttttttttG---------------------------GTGTGAC----AGAAAATTGTACATGTGCAGTCATGACTCATAAAAAATAGTAATAGTTTTCTCCACTTTATAAGAGTAttttcaatcttgctttcttttttttttttttttttttgcccttgtccaggcatagaccctccaggacaatgtctaatagaatgttgtagtgtgtgtctttttatattcttcggatagaaaggagaactctcaggatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctagtccttattttctgagagatagaaaactgaaaatgttttgaaatttacaaaatcctttttctttataagctgaaataatgtaat i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087565 372 - 80997621 TTTTTTTTG---------------------------GTGTGAC----AGAAAATTGTACATGTGCAGTCATGACTCATAAAAAATAGTAATAGTTTTCTCCACTTTATAAGAGTAttttcaatctttctttct---ttttttttttttttttgcccttgtccaggcatagaccctccaggacaatgtctaatagaatggtgtagtgtgtgtctttttatattcttcggatagaaaggagaactctcaggatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctagtccttattttctgagagatagaaaactgaaaatgttttgaaatttacaaaatcctttttctttataagctgaaataatgtaat i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2133990 375 + 10377808 TTTTTTTTG---------------------------GTGTGAC----AGAAAATTGTACGTGTGCAGTCATGACTCATAAAAAATAGTAATAGTTTTCTCCACTTTATAAGAGTATTTTCAATCTTGCTTTCTTTcttttttttttttttttgcccttgtccaggcatagaccctccaggacaatgtctaatagaatggtgtagtgtgtgtctttttatattcttcggatagaaaggagaactctcaggatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctagtccttattttctgagagatagaaaactgaaaatgtattgaaatttacaaaatcctttttctttataagctgaaataatgtaat i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2040720 370 - 8458610 ttttttttG---------------------------GTGTGAC----AGAAAATTGTACATGTGCAGTCATGACTCATAAAAAATAGTAATAGTTTTCTCCACTTTATAAGAGTAttttcaatcttgcttt-----ttttttttttttttttgcccttgtccaggcgtagaccctccaggacaatgtctaatagaatggtgtagtgtgtgtctttttatattcttcggatagaaaggagaactctcaggatttcacaattaattacaatgctttctgtcttttttatagattcatttcatcatagcaacagggcttgttctattccttattttctgagagatagaaaactgaaaatgtattgaaatttacaaaatcctttttctttatacgctgaaataatgtaat i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64973855 368 + 75148670 TTTATTTTG---------------------------GTGTGAC----AGAAAATTGTACATGTGCAGTCATGACTCATAAAAAATAGTAATAGTTTTCTCCACTTTATAAGAGTAttttcaatcttgc-------tttttttttttttttttgcccttgtccaggcgtaggcccaccgggacaatgtctaatagaatggtgtagtgtgtatctttttttattcttcggatagaaaggagaactctcagtatttcacaattaattaccatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttctattccttattttctgagaggtagaaaactgaaaatgtattaaaatttacaaaatcctttttctttataagctgaaataatgttat i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235596 373 + 4244037 ttttttttg---------------------------gtgtGAC----AGAAAATTGTACATGTGCAGTCATGACTCATAAAAAATAGTAATAGTTTTCTCCACTTTATAAGAGTATTTTCAATCTTGCTTT--TTtttttttttttttttttgcccttgtccaggcgtagaccctccaggacaatgtctaatagaatggtgtagtgtgtgtctttttatattcttcggatagaaaggagaactctcaggatttcacaattaattacgatgctttctgtcttttttgtagattcatttcatcatagcagcagggcttgttctattccttattttctgagagatagaaaactgaaaatgtattgaaatttacaaaatcctttttctttatacgctgaaataatgtaat i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2244946 370 + 4569836 TTTTTTTTG---------------------------GTGTGAC----AGAAAATTGTACATGTGCAGTCACGACTCATAAAAAATAGTAATAG-TTTCTCCACTTTATAAGAGTAttttcaatcttgtttt----tttttttttttttttttgcccttgtccaggcgtagacccaccaggacaatgtctaatagaatggtgtagtgtgtatctttttatattcttcggatagaaaggagaactctcagtatttcacaattaattatgatgctttctgtcttttttgtagattcatttcatcatagcaacagggcttgttttattccttattttctgagagacagaaaactgaaaatgtattgaaatttacaaaatcctttttctttataagctgaaataatgttat i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22855504 362 + 28711273 ttttttttgactctttccttctattttttgttcctCATGttacctgtagttttttggaaatgcatagtcat-----atcatctataatggtagctttattcatttcatagtaat-taaaaaatctttt----------------------------ttatccattcttaaaccctcgaggacaatgttgaataggatggtgtgg---atgtctttgaatattcttggtatagcagggacactgctcaatattttgtaattaagtgtga----ttctg-cctttttgtagactctttttatcagaataattaagctttttctatgctttgtttattaagatactctatcttgaaaa--cattgagatttatgaaatgctttttctttatgtgttgagataatATTAT i otoGar3.GL873537 T 45378 I 6709 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=188840.000000 s hg38.chr17_JH159148v1_alt 70278 33 + 88070 gattattctacctttt-cagtaagtgttgtttta s panTro5.chr17 16375292 34 + 83181570 gattattctaccttttccagtaagtgttatttta i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297469 34 + 83442489 gattattctaccttttccagtaagtgttatttta i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132897 33 + 4267968 gattattctacctttc-cagtaagtgttatttta i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117393 34 - 2193130 aattattctaccttttccagtaaatattatttta i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177623 34 - 77216781 gattattctaccttttccagtaaatgttatttta i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087937 34 - 80997621 gattattctaccttttccagtaaatgttatttta i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2134365 34 + 10377808 gattattctaccttttccagtaaatgttatttta i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2041090 34 - 8458610 gattattctaccttttccagtaaatgttatttta i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64974223 34 + 75148670 gattattctaccttttccagtaaatgttatttta i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2235969 34 + 4244037 gattattctaccttttccagtaaatgttatttta i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2245316 34 + 4569836 gattattctaccttttccagtaaatgttatttta i colAng1.NW_012122154v1 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e otoGar3.GL873537 22855866 6709 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=1264723.000000 s hg38.chr17_JH159148v1_alt 70311 215 + 88070 ttctatgttttttgagacagagtcttgcttcgtcacccaggctggagtgcagtggtacaatcttggctcactgcaatctccacctcccgggttcaagagattctcttgcctcagcctcccgagtagctgggactatgggagcacaccaccatgcccag------------------------------ctaacttttgta-tttttaatagagacagagtttcaccatgttggccagctgatcgcg s panTro5.chr17 16375326 215 + 83181570 ttctatgttttttgagacagagtcttgcttcatcacccaggctggagggcagtggtacaatcttggctcactgcaatctccacctcccgggttcaagagattctcttgcctcagcctcctgagtagctgggactatgggagcacaccaccatgcccag------------------------------ctaatttttgta-tttttaatagagacagggtttcaccatgttggccagctgatcgcg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297503 215 + 83442489 ttctatgttttttgagacagagtcttgcttcatcacccaggctggagggcagcggtacaatcttggctcactgcaatctccacctcccgggttcaagagattctcttgcctcagcctcctgagtagctgggactatgggagcacaccaccatgcccag------------------------------ctaatttttgta-tttttaatagagacagggtttcaccatgttggccagctgatcgcg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4132930 215 + 4267968 ttctatgttttttgagacagagtcttgctccgtcacccaggctggagtgcagtggtacaatcttggctcactgcaatctccacctcccgggttcaagagattctcttgcctcagcctcccgagtagctgggactatgggagcacaccaccatgcccag------------------------------ctaatttttgta-tttttaatagagacagggtttcaccatgttggccagctgatcgcg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117427 215 - 2193130 ttctatgttttttgagacagagtcttgctccgtcacccaggttggagtgcagtggtacaatctcggctcactgcaatctctacttcccaggtttaagagattctcttgcctcaacctcctgagtagttgggactacgggagaacaccaccatgcccag------------------------------ctaatttttgta-tttttaatagagacagggtttcaccacgttggccagctgatcgcg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177657 215 - 77216781 ttttatgttttttgagacagagtcttgttttgtcacccaggctggagtgcagtggtgcaatctctgctcactgcaatctccacctgctgggttcaagagattctcttgcctcagcctcccaagtagctgagactatgagtgcacaccaccatgcctgg------------------------------ttaatttttgta-tttttaatagagacaggatttcaccacgttggccagctgattgcc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28087971 215 - 80997621 ttttatgttttttgagacagagtcttgttttgtcacccaggctggagtgcagtggtgcaatctctgctcactgcaatctccacctgctgggttcaagagattctcttgcctcagcctcccaagtagctgagactatgagtgcacaccaccatgcctgg------------------------------ttaatttttgta-tttttaatagagacaggatttcaccacgttggccagctgattgcc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2134399 215 + 10377808 ttttatgttttttgagacagagtcttgttttgtcacccaggctggagtgcagtggtgcaatctctgctcactgcaatctccacctgctgggttcaagagattctcttgcctcagcctcccaagtagctgagactatgagtgcacaccaccatgcctgg------------------------------ttaatttttgta-tttttaatagagacaggatttcaccacgttggccagctgattgcc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2041124 216 - 8458610 ttttatgttttttgagacagagtcttgttttgtcacccaggctggagtgcagtggtgcaatctctgctcactgcaatctccacctgctgggttcaagagattctcttgcgtcagcctcccaagtagctgagactatgggtgcacaccaccatgcctgg------------------------------ttaatttttatattttttaatagagacaggatttcaccacgttggccagctgattgcc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64974257 215 + 75148670 ttttatgttttttgagacagagtcttgttttgtcgcccaggctggagtgcagcggcgcaatctcggctcactgtagtctccacctcccgggttcaagagattctcttgcctcagcctcccaagtagctgagactacgggcgcacaccaccatgcctgg------------------------------ttaatttttgta-tttttaatagagacagggtttcaccacactggccagcagattgcc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2236003 215 + 4244037 ttttatgttttttgagacagagtcttgttttgtcacccaggctggagtgcagtggtgcaatctctgctcactgcaatctccacctgctgggttcaagagattctcttgcgtcagcctcccaagtagctgagactatgggtgcacaccaccatgcctgg------------------------------ttaatttttgta-tttttaatagagacaggatttcaccacgttggccagctgattgcc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2245350 213 + 4569836 ttttatgttttatgagacagcgtcttgttttgtcgcccaggctggagtgcagtggcacaatctcggctcactgcaatctccacctcccgggttcaagagattctcttgcctcagcctcccaagtagctgagactatgggcgcacaccaccatgcctgg------------------------------ttaa-ttttgta--ttttaatagagacagggtttaaccacgttggccagtagattgcc i colAng1.NW_012122154v1 C 0 C 0 s otoGar3.GL873537 22862575 241 + 28711273 tttttttttttttgagacagaggctcactatgttgccctcagtagagtaccatggtg---tcacagctcacagcaacctcaaactcttgggcttaagtgattctcttgcctcagcctcccaagtagctgggactataggtgcccgccacaacgcctggcAGGAAACCACTGTACTACAGGTGCTGAGCCCAATAACAGTC-TTTTTAATCTAG-TATTGttttctcgtgtttgtctactggtagtt i otoGar3.GL873537 I 6709 I 169 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=222331.000000 s hg38.chr17_JH159148v1_alt 70526 39 + 88070 aactcctgacctcaagagatccacctgcctcggcttccc s panTro5.chr17 16375541 39 + 83181570 aactcctgacctcaagagatccacctgcctcggcttccc i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297718 39 + 83442489 aactcctgacctcaagagatccacctgcctcggcttccc i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4133145 39 + 4267968 aactcctgacctcaagagatccacctgcctcggcttctc i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117642 39 - 2193130 aactcctgaactcaagtgatccacctgcctctgcttccc i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177872 39 - 77216781 aactcctgatctcaagtgatccacctgcctcggcctccc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28088186 39 - 80997621 aactcctgatctcaagtgatccacctgcctcggcctccc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2134614 39 + 10377808 aactcctgatctcaagtgatccacctgcctcggcctccc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2041340 39 - 8458610 aactcctgatctcaagtgatccacctgcctcggcctccc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64974472 39 + 75148670 aactcctgacctcaagtgatctacctgcctcggcttccc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2236218 39 + 4244037 aactcctgatctcaagtgatccacctgcctcggcctccc i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2245563 39 + 4569836 aactcctgacctcaagtgattcacctgtctcggcttccc i colAng1.NW_012122154v1 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e otoGar3.GL873537 22862816 169 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=331460.000000 s hg38.chr17_JH159148v1_alt 70565 60 + 88070 aaaatgtgtt----------------------------------------------------attttaaaagttgattaatgttca----aatattagcccagtcttgcatttctg s panTro5.chr17 16375580 60 + 83181570 aaaatgtgtt----------------------------------------------------attttaaaagttgattaatgttca----aatattagcccagtcttgcatttctg i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297757 60 + 83442489 aaaatgtgtt----------------------------------------------------attttaaaagttgattaatgttca----aatattagcccagtcttgcatttctg i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4133184 60 + 4267968 aaaatgtgtt----------------------------------------------------attttaaaagttgattaatgttca----aatattagcccagtcttgtatttctg i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117681 60 - 2193130 aaaatgtgtt----------------------------------------------------attttaaaagttgattaatgatca----aatattagctcagtcttgtatttctg i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177911 60 - 77216781 aaagtgtgtt----------------------------------------------------atttaaaaagttgattaatgtcta----aatgttagcccagtcttgtatttttt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28088225 60 - 80997621 aaagtgtgtt----------------------------------------------------atttaaaaagttgattaatgtcta----aatgttagcccagtcttgtatttttg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2134653 60 + 10377808 acaatgtgtt----------------------------------------------------atttaaaaagttgattaatgtcta----aatgttagcccagtcttgtatttttg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2041379 60 - 8458610 aaagtgtgtt----------------------------------------------------atttaaaaagttgattaatgtcca----aatgttagcccagtcttgtagttttg i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64974511 60 + 75148670 aaagtgtgtt----------------------------------------------------atttaaaaagttaattaatattca----aatgttagctcagtcttgtatttttg i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2236257 60 + 4244037 aaagtgtgtt----------------------------------------------------atttaaaaagttgattaatgtcca----aatgttagcccagtcttgtatttttg i manLeu1.NW_012106252v1 C 0 C 0 s colAng1.NW_012122154v1 2245602 60 + 4569836 aaagtgtatt----------------------------------------------------atttaaaaagttgattaatgttca----aacgttagcccagtcttgtatttctg i colAng1.NW_012122154v1 C 0 N 0 s otoGar3.GL873537 22862985 116 + 28711273 aaaatgtgttgaaatttataaaatgagataatgttatgattgttctgtttttagtaaatgtgacttaaattgttgattcatgttcagatggatgttgaaccaaccttgcatttctg i otoGar3.GL873537 I 169 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=455671.000000 s hg38.chr17_JH159148v1_alt 70625 94 + 88070 aaaacaattcatgtggttacgatcatatgtatatgccattggattttatttacttatattttgtttaggatatttacTATCATTGCATTCCAAA s panTro5.chr17 16375640 94 + 83181570 aaaacaattcatgtggttacgatcatatgtatatgccactggattttatttacttatattttgtttaggatatttacTATCATTGCATTCCAAA i panTro5.chr17 C 0 C 0 s panPan2.chr17 16297817 94 + 83442489 aaaacaattcatgtggttacgatcatatgtatatgccactggattttatttacttatattttgtttaggatatttacTATCATTGCATTCCAAA i panPan2.chr17 C 0 C 0 s gorGor5.CYUI01015385v1 4133244 94 + 4267968 aaaacaattcatgtggttacgatcatatgtatatgccactggattttatttacttatattttgtttaggatatttacTATCATTGCATTCCAAA i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117741 94 - 2193130 aaaacaattcatgtggttatgatcatatgtatatgccactggattttatttacctatattttgtttaggatatttacTATCATTGCATGCCAAA i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30177971 94 - 77216781 aaaacaattcatgtggttatgatcatatgcatatgctactggattttgcttatttatattttgtttgggatACTTACGATCATTGCATTCCAAA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28088285 94 - 80997621 aaaacaattcatgtggttatgatcatatgcatatgctactggattttgcttatttatattttgtttgggatACTTACGATCATTGCATTCCAAA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2134713 94 + 10377808 aaaacaattcatgtggttatgatcatatgcatatgctactggattttgcttatttatattttgtttgggatACTTACGATCATTGCATTCCAAA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2041439 94 - 8458610 aaaacaattcatgtggttatgatcatatgcatatgctactggattttgcttatttatattttgtttgggatacttacaATCATTGCATTCCAAA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64974571 94 + 75148670 aaaacaattcatgtggttatgatcatatgcatacgctactggattttgcttatttatattttgtttgggatACTTACGATCATTGCATTCCAAA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2236317 94 + 4244037 aaaacaattcatgtggttatgatcatatgcatatgctactggattttgcttatttatattttgtttgggatacttacaATCATTGCATTCCAAA i manLeu1.NW_012106252v1 C 0 C 0 s otoGar3.GL873537 22863101 49 + 28711273 aaaacaattcatgtggttatgaccatatgtatatggcac--gatattgatt------------------------------------------- i otoGar3.GL873537 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 632890 2779 - 852752 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=656346.000000 s hg38.chr17_JH159148v1_alt 70719 125 + 88070 AATATATTCTCCTATTCTTACTCTATTTCCTCTACCTTCTCTAAGTAAAGAAATTCCGAATATAGCAAAATT-CCTACCCTTCTGTG-CCCAATTTGACCTTGATGTGACCCCCTGTATTGGTTTTT s panTro5.chr17 16375734 125 + 83181570 AATATATTCTCCTATTCTTACTCTATTTCCTCTACCTTCTCTAAGTAAAGAAATTCCGAATATAGCAAAATT-CCTACCCTTCTGTG-CCCAATTTGACCTCGATGTGACCCCCTGTATTGGTTttt i panTro5.chr17 C 0 N 0 s panPan2.chr17 16297911 125 + 83442489 AATATATTCTCCTATTCTTACTCTATTTCCTCTACCTTCTCTAAGTAAAGAAATTCCGAATATAGCAAAATT-CCTACCCTTCTGTG-CCCAATTTGACCTTGATGTGACCCCCTGTATTGGTtttt i panPan2.chr17 C 0 N 0 s gorGor5.CYUI01015385v1 4133338 124 + 4267968 AATATATTCTCCTATTCTTACTCTATTTCCTCTACCTTCTCTAAGTAAAGAAATTCTGAATATAGCAAAATT-CCTACCCTTCTGTG-CCCAATTTGACCTTGATGTGACCCCC-GTATTGGTTTTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117835 124 - 2193130 AATATATTCTCCTATTCTTACTCTATTTCCTCTACCTTCTCTAAGTAAAGAAATTCTGAATATAGCAAAATT-CCTACCCTTCTGTG-CCCAATTTGACCTTGATGTGACCCCT-GTATTGGTTTTT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30178065 121 - 77216781 AATATATTCTCCCATTCTTACTCTATTTCCTCTACCTTCTC----TAAAGAAATTCTGAATACAACAAAATT-CCTACCCTTCTGTG-CCAAATTTGACCTTGATGTGACCCCCTGTATTGGTTTTT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28088379 121 - 80997621 AATATATTCTCCCATTCTTACTCTATTTCCTCTACCTTCTC----TAAAGAAATTCTGAATACAACAAAATT-CCTACCCTTCTGTG-CCAAATTTGACCTTGATGTGACCCACTCTATTGGTTTTT i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2134807 121 + 10377808 AATATATTCTCCCATTCTTACTCTATTTCCTCTACCTTCTC----TAAAGAAATTCTGAATACAACAAAATT-CCTACCCTTCTGTG-CCAAATTTGACCTTGATGTGACCCCCTGTATTGGTTTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2041533 121 - 8458610 AATATATTCTCCCATTCTTACTCTATTTCCTCTACCTTCTC----TAAAGAAATTCTGAATACAACAAAATT-CCTACCCTTCTGTG-CCAAATTTGACCTTGATGTGACCCCCTGTATTGGTTTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64974665 121 + 75148670 AATATATTCTCCCATTCTTACTCTATTTCCTCTACCTTCTC----TAAAGAAATTCTGAATACAGCAAAATT-CCTACCCTTCTGTG-CCCAATTGGACCTTGATGTGACCCCCTGTATTGGTTTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2236411 120 + 4244037 AATATATTCTCCCATTCTTACTCTATTTCCTCTACCTTCTC----TAAAGAAATTCTGAATACAAC-AAATT-CCTACCCTTCTGTG-CCAAATTTGACCTCGATGTGACCCCCTGTATTGGTTTTT i manLeu1.NW_012106252v1 C 0 C 0 s otoGar3.GL873537 22863150 111 + 28711273 --------------tgcttattctatGTCCTCTACCTTCTTTAAATAAATAAGTTCTAAACACTCCAGGATT-TGTGCCCTATGGTA-CCCAATTTGACCTTGATGTTATTCCCTGTATTAGCATTT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 635669 126 - 852752 AATTTATTCTTCTGTTGTTACTCT-CTTCTTTGGTGTTCTCTAAATGAGTTAGTTGTGATTGTGGCAAGATTCCCCATTCTCCTGAGATTCAGTTTGGTTTCAGTGTTAATGTCTATATTGATGTTT i dasNov3.JH570468 I 2779 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=1440044.000000 s hg38.chr17_JH159148v1_alt 70844 395 + 88070 CTAAAGGCAATTTCATGCCCCATGAAATACTCTAGCAGTTCTATTGCAGAGTGTGGGCTTGGGGATCAACAGTTCTTTTTTCAACAGGG-----------------------------GCACTAGACTATCCCATGGGTCCCTTTCAAACACAC--ACACCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAGTTGTAGT-CTTTCTTATCTACTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGAAATCTGTACTTAGTCATTTCTACAACAATATTGTGTTAATCTAGAAAACGTGAGTGAGGAATTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGCATATGTAGGTATCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAGTGTGATTGGTGGATC s gorGor5.CYUI01015385v1 4133462 397 + 4267968 CTAAAGGCAATTTCATGCCCCATGAAATACTCTAGCAGTTCTATTGCAGAGTGTGGGCTTGGGGATCAACAGTTCTCTTTTCAACAGGG-----------------------------GCACTAGAGTATCCCATGGGTCCCTTTCTGACACACAGACACCCCATGGAGGGAACTCCCAGGAGATACTTGTAGCCCAGTTGTAGT-CTTTCTTATCTACTTTG-ACAGAAACAATGAAGTCTAGCCCAACTATCTGAAATCTGTACTTAGTCATTTCTACAACAATATTGTATTAATCTAGAGAACATGTGTGAGGAATTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACAGCAGGATATGTAGGTACCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAGTGTGATTGGTGGATC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2117959 395 - 2193130 CTGAAGGCAATTTCATGCCCCATGAAATAGTCTAGCAATTCTATTGCAGAGCGTGGGCTTGGGGCTCAACAGCTCTCTTTTCAACAGGG-----------------------------GCACTAGACTATCCCATGGGTCCCTTTCTGACACAC--ACACCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAGTTGTAGT-CTTTCTTATCTACTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGGAATCTATACTTAGTCATTTCTACAACAATATTGTATTAATCTAGAGAACTTGAGTGAGGAATTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATGTAGATATCACTTAAATTCATTGAGGAGAACC-------TGGGGGAAAGTGTGATTGGTGGATC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s rheMac8.chr16 30178186 392 - 77216781 CTGAAGGCAATTTCATGTCCCATGAGATACTCTAGCAGTTCTGTTGCAGAGTGTGGGCT-GGGGGTCAACAGTTCTC--TTCAGCAGGA-----------------------------GGACTAGACTATCCCATGGATCCCTTTCTGACACAC--ACATCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAGTTGTTGT-CTTTCTTATCTTCTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGAAATCTATGCTTAGTCATTTCTGCAACAATACTGTATTAATCTAGAGAACGTGAGTAAGGAGTTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATGTAGGTATCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAATGTGATTGGTGGATC i rheMac8.chr16 C 0 I 128 s macFas5.chr16 28088500 392 - 80997621 CTGAAGGCAATTTCATGTCCCATGAGATACTCTAGCAGTTCTGTTGCAGAGTGTGGGCT-GGGGGTCAACAGTTCTC--TTCAGCAGGA-----------------------------GGACTAGACTATCCCATGGATCCCTTTCTGACACAC--ACATCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAGTTGTTGT-CTTTCTTATCTTCTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGAAATCTATGCTTAGTCATTTCTGCAACAATACTGTATTAATCTAGAGAACGTGAGTAAGGAGTTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATGTAGGTATCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAATGTGATTGGTGGATC i macFas5.chr16 C 0 I 98 s macNem1.NW_012014910v1 2134928 392 + 10377808 CTGAAGGCAATTTCATGTCCCATGAGATACTCTAGCAGTTCTGTTGCAGAGTGTGGGCT-GGGGGTCAACAGTTCTC--TTCAGCAGGA-----------------------------GGACTAGACTATCCCATGGGTCCCTTTCTGACACAC--ACATCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAGTTGTTGT-CTTTCTTATCTTCTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGAAATCTATGCTTAGTCATTTCTGCAACAATACTGTATTAATCTAGAGAACGTGAGTAAGGAGTTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATGTAGGTATCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAATGTGATTGGTGGATC i macNem1.NW_012014910v1 C 0 I 128 s cerAty1.NW_012006043v1 2041654 392 - 8458610 CTGAAGGCAATTTCATGTCCCATGAGATACTCTAGCAGTTCTGTTGCAGAGTGTGGGCT-GGGGGTCAACAGTTCTC--TTCAGCAGGG-----------------------------GGACTAGACTATCCCATGGGTCCCTTTCTGACACAC--ACATCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAATTGTTCT-CTTTCTTATCTCCTTTG-ACAGAAACAAAGAAGTCTAGCCCAATTATCTGAAATCTATGCTTAGTCATTTCTACAACAATACTGTATTAATCTAGAGAACGTGCGTAAGGAGTTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATGTAGGTATCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAATGTGATTGGTGGATC i cerAty1.NW_012006043v1 C 0 I 219 s chlSab2.chr16 64974786 391 + 75148670 CTGGAGGCAATTTCATGTCCCATGAGATACTCTAGCAGTTCTGTTGCAGAGTGTGGGCT--GGGGTCAACAGTTCTC--TTCAGCAGGG-----------------------------GGACTAGACTATCCCATGGGTCCCTTTCTGACACAC--ACACCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAATTGTTGT-CTTTCTTATCTCCTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGAAATCTATGCTTAGTCATTTCTACAACAGTACTATATTAATCTAGAGAATGTGAGTAAGGAGTTGTCTTTAATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATATAGGTATCAGTTAAATTCGTTGAGGAGAACC-------TGGGGGAAAGTGTGATTTGTGGATC i chlSab2.chr16 C 0 I 132 s manLeu1.NW_012106252v1 2236531 392 + 4244037 CTGAAGGCAATTTCATGTCCCATGAGATACTCTAGCAGTTCTGTTGCAGAGTGTGGGCT-GGGGGTCAACAGTTCTC--TTCAGCAGGG-----------------------------GGACTAGACTATCCCATGGGTCCCTTTCTGACACAC--ACATCCCATGGGGGGAACTCCCAGGAGATACTTGTAGCCCAATTGTTGT-CTTTCTTATCTCCTTTG-ACAGAAACAATGAAGTCTAGCCCAATTATCTGAAATCTATGCTTAGTCATTTCTACAACAATACTGTATTAATCTAGAGAACGTGAGTAAGGAGTTGTCTTTTATCTGCAACTCAAATTATAGGAGGAGGAAATTACATCAGGATATGTAGGTATCAGTTAAATTCATTGAGGAGAACC-------TGGGGGAAAATGTGATTGGTGGATC i manLeu1.NW_012106252v1 C 0 I 81 s otoGar3.GL873537 22863261 423 + 28711273 CTGAGTGCATTTTCATGCCCGATAAAATACACTAGCAGAGTTATTGTATGTTCTGAGCCTGGGGAACAACTGTTTCTTTTTAAATAGGAAAAGTACACTATAACATGCACTTTAAGATGCACTATAACATCCCACAGGTCCCTTTAAAACACAC--AAA--CCATG--GGGAATTCCAAGGAGAAACATATAGCCAAATTGCAGA-ATTTGTTACCTACTTTGAACAGAAATAGCAAAGTCTGGATCAATTTTCTAAAATTAATAATTGTTTGTATCT---ATAATACTGTGTTAATACAGAGAACATAAGTGAGCAATTGCACTTAACTTTTAACTCAAAGTATAGGAAGAGGAAATTATTCTGGGATTTATAAGCAGCAGCTAAAGTTATTGAAGAAAACCTGGAGGGTGGGGGGAGGTGTGA--GGTGAATC i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 635795 365 - 852752 CTGAAGGCAC----------------ATAAACTAGTAATGCTATTG--AAGTTTTAGTTCAGTGTGCAACAGTCTTCTGTCATATGGGT-----------------------------ACATTACAATAGTTCAAGGCTTACTTTCTGATGCAC------TGCTTTGGAGGAATTCCACAGAAAAACTTGTAACCAAATAGTTGAGTTTTGTTTTCCTCATTA-ACAGAGGCAACAAATTTGGGTTCAATTTTCTGAAATTAA--ATTGATCACATCTACAAAAATTTTATATTTTTCTAGAGAACATTAATGAAGAGTTGTCCTTATCACTCAGCTCAAATCATCAACAGAAAAAATTACTTCATGACCAGTA-ACATCAGCACAA------GAAGGGAAAC-------TAGGAAAAAGTGCGATTGGTGGATC i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=15753.000000 s hg38.chr17_JH159148v1_alt 71239 36 + 88070 CCAAATAACGAGACAGTGGTATCAGATTATCACTTG s gorGor5.CYUI01015385v1 4133859 36 + 4267968 CCAAATAACGAGATAGTGGTATCAGATTATCACTTG i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2118354 36 - 2193130 ACAAATAACAATATAGTGGTATCAGATTATCACTTG i nomLeu3.chrUn_GL397460_1 C 0 C 0 s otoGar3.GL873537 22863684 36 + 28711273 ATAAGTAAAAGGCTGTTGGTATCAGATCATCGCCTG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 636160 36 - 852752 ACTCCTTACAAACCAATGGTTCCAGATGATCAGCTT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2236923 81 + 4244037 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64975177 132 + 75148670 I e cerAty1.NW_012006043v1 2042046 219 - 8458610 I e macNem1.NW_012014910v1 2135320 128 + 10377808 I e macFas5.chr16 28088892 98 - 80997621 I e rheMac8.chr16 30178578 128 - 77216781 I a score=1705.000000 s hg38.chr17_JH159148v1_alt 71275 2 + 88070 AT s gorGor5.CYUI01015385v1 4133895 2 + 4267968 AT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2118390 2 - 2193130 AT i nomLeu3.chrUn_GL397460_1 C 0 C 0 s manLeu1.NW_012106252v1 2237004 2 + 4244037 AT i manLeu1.NW_012106252v1 I 81 I 1 s otoGar3.GL873537 22863720 2 + 28711273 AT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 636196 2 - 852752 AG i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64975177 132 + 75148670 I e cerAty1.NW_012006043v1 2042046 219 - 8458610 I e macNem1.NW_012014910v1 2135320 128 + 10377808 I e macFas5.chr16 28088892 98 - 80997621 I e rheMac8.chr16 30178578 128 - 77216781 I a score=-916.000000 s hg38.chr17_JH159148v1_alt 71277 4 + 88070 -TAAC s gorGor5.CYUI01015385v1 4133897 4 + 4267968 -TAAC i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2118392 4 - 2193130 -TAAC i nomLeu3.chrUn_GL397460_1 C 0 C 0 s macFas5.chr16 28088990 4 - 80997621 -TAAC i macFas5.chr16 I 98 I 26 s manLeu1.NW_012106252v1 2237007 3 + 4244037 -TAT- i manLeu1.NW_012106252v1 I 1 C 0 s otoGar3.GL873537 22863722 4 + 28711273 -CAAC i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 636198 4 - 852752 AAAA- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64975177 132 + 75148670 I e cerAty1.NW_012006043v1 2042046 219 - 8458610 I e macNem1.NW_012014910v1 2135320 128 + 10377808 I e rheMac8.chr16 30178578 128 - 77216781 I a score=1463754.000000 s hg38.chr17_JH159148v1_alt 71281 397 + 88070 AAACACATAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGCCTATTGCACTGAGTTTTACATGTAGATTTTTGAAGAGAGTGGAAAGTAAACACTGAGTTT-CCTGAGAATATAAGTAGACGTGTATGACA--GAATATCATTATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACACTAACATGTAAGAAATATCACTATTTAG-ACCCTACAGAGGGATGGCTTTGGATAGAAaaata----agattagattgcccttggaa-------cttcaaagttacacaaaaagaaacagagcaaagttatgcacaggcatcttaaaaagaatgaatggcttcgaagctagccaaatttATTCTAGTCTGG-TAAGGA----TTTGAAA-ATGA----A----TATTTCTT s gorGor5.CYUI01015385v1 4133901 397 + 4267968 AAACACCTAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGCCTATTGCACTGAGTTTTACATGTAGATTTTTGAAGAGAGGGGAAAGTAAACACTGAGTTT-CCTGAGAATATA---AGACATGTATGACA--GAATATCATTATCGGTTCTTAAATATTAT-GCAGAAATGAATGAAGTGAAAGTTTACACTAACATGTAAGAAATATCACTATTTAG-GCCCTACAGAGGGATGGCTTTGGATAGAAaaataagagagattagaatgctcttggaa-------cttcaaagttacacaaaaagaaacagagcaaagttatgcacaggcatcttgaaaagaatgaatggcttcgaagctagccaaatttattctagtctga-tAAGGA----TTTGAAA-ATGA----A----TATTTCTT i gorGor5.CYUI01015385v1 C 0 C 0 s nomLeu3.chrUn_GL397460_1 2118396 401 - 2193130 AAACACATAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGCCTACTGCACTGAGTTTTACATGTAGATTTTTGAAGAGAGTGGAAAGAAAACACTGAGTTT-CCTGAGAATATAAGTAGACATGTATGACA--GAATATCATAATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACACTAACATGTAAGAAAtatcactatttag-gccctatagagagatggctttggacagaaaaataagagagattagattgcccttggaa-------cttcaaagttacacaaaaagaaacagagcaaatttatgcacagacatcttaaaatgaatgaatggcttcgaggctagccaaatttattctagtctga-tAAGGA----TTTCAAA-GTGA----A----TATTTCTT i nomLeu3.chrUn_GL397460_1 C 0 N 0 s rheMac8.chr16 30178706 402 - 77216781 AAACATACAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGGCTATTGCACTGAGTTTTACATGTAGAGTTTTGAAGATAGTGGAAAGGAAACACTGAGTTT-CCTGAGAATATAAGGAGACGTGTGTGATA--GAATATCATAATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACATTAACATGTAAGAAGtatcactatttag-gccctacagagagatggctttggacagaaaaataagagaagttagattgcccttggaa-------cttcaaagttacacaaaaagaaaaagagcaaagttatgcaaagccatcttaaaaagaatgaatggctttgaggctagccaaatttatactagtctga-tAAGGA----TTTGAAAAATGA----A----TATTTCTT i rheMac8.chr16 I 128 C 0 s macFas5.chr16 28089020 402 - 80997621 AAACATACAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGGCTATTGCACTGAGTTTTACATGTAGAGTTTTGAAGATAGTGGAAAGGAAACACTGAGTTT-CCTGAGAATATAAGGAGACGTGTGTGATA--GAATATCATAATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACATTAACATGTAAGAAGtatcactatttag-gccctacagagagatggctttggacagaaaaataagagaaattagattgcccttggaa-------cttcaaagttacacaaaaagaaaaagagcaaagttatgcaaagccatcttaaaaagaatgaatggctttgaggctagccaaatttatactagtctga-tAAGGA----TTTGAAAAATGA----A----TATTTCTT i macFas5.chr16 I 26 C 0 s macNem1.NW_012014910v1 2135448 402 + 10377808 AAACATACAAAACATGAAAGCCCATGCAGCTCTCTAACAACAGGGCTATTGCACTGAGTTTTACGTGTAGAGTTTTGAAGATAGTGGAAAGGAAACACTGAGTTT-CCTGAGAATATAAGGAGACGTGTGTGATA--GAATATCATAATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACATTAACATGTAAGAAGtatcactatttag-gccctacagagagatggctttggacagaaaaataagagaaattaaattgcccttggaa-------cttcaaagttacacaaaaagaaaaagagcaaagttatgcaaagccatcttaaaaagaatggatggctttgaggctagccaaatttATACTAGTCTGA-TAAGGA----TTTGAAAAATGA----A----TATTTCTT i macNem1.NW_012014910v1 I 128 C 0 s cerAty1.NW_012006043v1 2042265 402 - 8458610 AAACATACAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGGCTATTGCACTGAGTTTTACATGTGGAGTTTTGAAGATAGTGGAAAGGAAACACTGAGTTT-CCTGAGAATATAAGGAGACGTGTATGATA--GAATATCATAAGCAGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACATTAACATGTAAGAAGtatcactatttag-gccctacagagagatggctttggacagaaaaataagagaaattagattgcccttggaa-------cttcaaagttacacaaaaagaaaaagagcaaagttatgcaaagccatcttaaaaagaatgaatggctttgaggctagccaaatttATACTAGTCTGA-TAAGGA----TTTGAAAAATGA----A----TATTTCTT i cerAty1.NW_012006043v1 I 219 C 0 s chlSab2.chr16 64975309 395 + 75148670 AAACATACAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGTCTATTGCACTGAGTTTTACATGTAGATTTTTGAAGAGAGTGCAAAGGAAACACTGAGTTT-CCTGAGAATATAAGGAGACGTATATGACA--GAATATCATAATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACACTAACATGTAAGAAGTATCACTATTTAG-GCCCTACAGAGAGATGGCTTTGGACagaaaaataag-------agattgcccttggaa-------cttcaaagttacacaaaaagaaaaagagcaaagttatgcaaagccatcttaaaaagaatgaatggctttgaggctagccaaatttattctagtctga-tAAGGA----TTTGAAACACGA----A----TATTTCTT i chlSab2.chr16 I 132 C 0 s manLeu1.NW_012106252v1 2237010 402 + 4244037 AAACATACAAAACATGAGAGCCCATGCAGCTCTCTAACAACAGGGCTATTGCACTGAGTTTTACATGTGGAGTTTTGAAGACAGTGGAAAGGAAACACTGAGTTT-CCTGAGAATATAAGGAGACGTGTATGATA--GAATATCATAATCGGTTCTTAAATATTATGGCAGAAATGAATGAAGTGAAAGTTTACACTAACATGTAAGAAGtatcactatttag-gccctacagagagatggctttggacagaaaaataagagaaattagattgcccttggat-------cttcaaagttacacaaaaagaaaaagagcaaagttatgcaaagccatcttaaaaagaatgaatggctttgaggctagccaaatttATACTAGTCTGA-TAAGGA----TTTGAAAAATGA----A----TATTTCTT i manLeu1.NW_012106252v1 C 0 C 0 s otoGar3.GL873537 22863726 373 + 28711273 AAACACCTCAGACATGAAAGCCCATAGAAC-ATGTAAAGCCAGACCCAGTCCACTGAG-TTTACATGTAGATTTTAGTTGAGATTGGAGAGGAAATGCGGAGTTTGCCTGAGCATACTGTTAAACTTATATGACATGTAATATCATAATTGGC-----AAAATGATGGCAGAAATGAACCCAATAAAAGTGTACCCTAACACATAAGAAACATCACAGATTGG-ACACCACAGAGAGTTGTCATGGGACAGGAAAATAAGAGAGAATAGATTGCCCTTG--------------------------AAAGGAACAAATTAAAGCTATG------CACCTTA----GAATGAATGGTGTCAAGGCTGGCAGATCTTATTCCAGTCTGA-TGAGGA----GTCAAAACCTGAATTTA----TATTTCTT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 636202 413 - 852752 AAACACACAAAATTTGAGAGTCAAGGCAACTTTCAAAATACATTCCTACCTCACTGAGTTTTACATTTAGAATTTGTAAGAC-GTGGGAAGT--ATCATGAGTTA-CCTGAATATATAATTAAACATATATGATGTGTAATATCCTAATTGGCTCTTAAATGACATGGCATAAGTAAACCTAATGAAAGCTTATACTAACATCTTAGATAGGTCACACTCTGGTACTCT----GAAAATTCTATAAAACCACATaagaagagagagaagattatccttggagtgtgactcttaaaaatatcataaaagagagcagagccaaaatatgtacaggcaatttaaagaaaaagaatggcttcaagattagc-aaatttactctagtctggttcaggatttgtttgaaaaatga----atgtgtATATCTT i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=61504.000000 s hg38.chr17_JH159148v1_alt 71678 20 + 88070 ATATGGGAATGTGGCATTCA s gorGor5.CYUI01015385v1 4134298 20 + 4267968 ATATGGGAATGTGGCATTCA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30179108 20 - 77216781 AAATGGGAATGGGGTATTCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28089422 20 - 80997621 AAATGGGAATGGGGTATTCA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2135850 20 + 10377808 AAATGGGAATGGGGTATTCA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2042667 20 - 8458610 AAATGGGAATGGGGTATTCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64975704 20 + 75148670 AAATGGGAATGGGGTATTCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2237412 20 + 4244037 AAATGGGAATGGGGTATTCA i manLeu1.NW_012106252v1 C 0 C 0 s otoGar3.GL873537 22864099 20 + 28711273 AAATAGGAGCagggtgttca i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 636615 20 - 852752 AAATGTAATTGGAGTAATTA i dasNov3.JH570468 C 0 T 11792 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=6552.000000 s hg38.chr17_JH159148v1_alt 71698 2 + 88070 AA s gorGor5.CYUI01015385v1 4134318 2 + 4267968 AA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30179128 2 - 77216781 AA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28089442 2 - 80997621 AA i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2135870 2 + 10377808 AA i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2042687 2 - 8458610 AA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64975724 2 + 75148670 AA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2237432 2 + 4244037 AA i manLeu1.NW_012106252v1 C 0 C 0 s otoGar3.GL873537 22864119 2 + 28711273 aa i otoGar3.GL873537 C 0 I 50595 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e saiBol1.JH378271 1888661 14031 + 3513951 T a score=9861467.000000 s hg38.chr17_JH159148v1_alt 71700 4121 + 88070 TTCTTCCCTCtgggaatatatgtaggagtgaaattgccacgtcataggaaacacttataatcagcattagtagaAAGAAAAAAGCAGTGTTTCAACATTTTACAACCAGTAGTGACTCCTGCTTGACCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttatgttttagatttgcatttatttgatgactaatgtctaataggcattggttgttcctttttcctttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgttaatttcttagtgttttatagATTTTGGACGTATGTTCTGACTAGTGT----------------atagatagatagatagatagatagatagatagatagatagataATGTGGAGATTATTTTCTATAAACTTATATAAGATATATATGTATCAGGAGTTTATCATTTATTGAGTGGATATGGTATAAATATTTTGTCACATGCTGTGTTTTATCTTTCCTTTTTGCTCTCTTTTTTTTGTTAAATTTTGTTTTTAATTTTTACCAAAACATGAATCCTGTTAT-Tgtcatttaacaatggggataggttctgagaaatgaaccactaggtaattttgtcattgtgtgaacattgtagagtgtacttaaacctggatcatatagcttactatacatctaggctatttgatatggcctatt-TTTAAAAattatactttaagttctggggtacatgtgcagaacgtgcaaatttgttacataagtatacacgtgccatggtggtttgctgcacccatcaacccgtcatctacattaggtatttcacttaatgctatccctcctgtatccccctactccctgacaggccctggtgtgtgatgttcccctccctgtgtccatgtgtgctcattgttcagctctcacttatgagtgagaacatgcagtgtttggttttctgttcttgtgttagtttgctgagaataatggtttccagcttcatccatgtccctgcaaaggacatgaactcattttttttatggctacatagtattccatggtgtatatgtgccacattttctttatccagtctatcactgatgggcatttgtgttggttccaagtctttgctattgcaaacagtgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcatttgggtatatactcagtaatgggattgctggggcaaatggtatttctggttctagatccttcaggaattgccacactgtcttccacagtggttgaactaatttacagtcccaccaacagtgtaaaaatgtgcctatttctccacatcctctccagcctctgttgtttcttgcctttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttacatttctctaatgaccagtgatgatgagctttctttcatatgtttgttagctaaatgtcttcttttgagaagtgtctgttcatatccttcacccactttttgataggggttttgcccatgcctgtgtcctgaatggtactgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtctttaatccatcttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatcctttccccattgcttgtttatgtgaggtttgtaaaagatcagatggttgtagatatgtggtgttatttctgaggtttctattctgttccattcgtctatacatctgttttggtactaataccatggattttggctactgtagccttgtagtattgtttgaagtcaggtagcatgatgccttcagctttgttctttttgctgaggattgtctcagctatgcaggctcttttttggttccatatgaaatttaaagtag---ttttttctaattctgtgaagaaagtcaatggtagcttgatggggatagcattgaatatataaattactttgggcagtattgtcattttcatgatattgattcttcctatccattaccatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttaaagaggtccctcacatctcgtgtaagttgtattcctaagtattttattctctttgtagcaattgtgaatgggagttcacttatgatttggctctctgcttgtctattattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgagattttgctgaagttgcttatcagcttaaggagtttttgggctgagacgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatttgagtatgctttatttctttcttttgcctgattactctggccagaacttccaatactatgttgaatagcagtggtgagagagggtatccctgtcttgtgtcggttttcaaagggaatgcctccagcttttgcccattcagtattatattatctgtgggtttatcataaatagctcttattattttgagatacgttccatcaatacctagtttattgagtg--tttttagcatgaagaggtgtcgaagtttattgaaggccttttcttcatctatcaagataatcatgtggtttttgtcattggttctattaatgtgatagattacatttattgatttgcttatgttgaaccagtcttgcatccgagggatgaagtcgacttgattgtggtggataagctttgtaatgtggtgctggattcggtttgccagtattttatagaggattttcgcaccaatgttcatcagggatattggcttgagattttctttttttgttatgtttttgcccagttttagcattagaatgatgctggcctcataaaatgagttagggaggagtctacctttttctattgtttggaatagttttagaaggaatggtaccagctcctctttgtgcctctgatagaatttggctgtgaatccgtctggtcctgggct-----tttt----------------ttttggttggtaggctattaattactgcctcaatttcagaacttgctattggtgtatttagggattcgaattcttcctggtttagtcttcggagggtgtgtgtgtccaggaattaatccatttcttctagattttctagtttatttgagtagaggtgtttatagtattctctgatggtagtttgtatttctgtgggatcagtggtaatct-cccgtttatcattttttattgtgtctctttgagtctcctctcttttcttctttattagtctggctagtgctctattttgtaaatcttttcaagaaatcagctcctggattcattgattttttgaaggattttttgtgtctctatctccttcagttctgctctgatcatagttatttcttgtcttttgtgagctattgaatttgtttgctgttgcttctctagttctttaaattgtgatgttagggtgtcgattttagatctttcccactttctcatgtgggcatttagtgctataaatttccctctaaacactgctttagctgtgtcccagagattctggtacattgtgtctttgttctcattggtttcaaataacttatttatttctaccttaattttgttatttaccca-tagtcattcaggagcaggttgttcagtttccatgtagttgtgtggttttgagtttctttctttctttcttctttctttctttctttctttctttctttctttctttctttcttctttcttctttctttctttttttgagacagagtctcgctctgtcacccaggctgtagtgcagtagcgtgatcttggctcactgcaacctctgtctcccgggttcaagcgattctcctgcctcagcctcctgagtagctggaattacaggcgcttgccaccatgcctgcctaaattttttgtatttttcgtagagacacggcttcaccgtgttagccagaatggtctcgatctcctaaccttgtgatctgccca-ctcggcctcccaaagtgctgggattacaggcatgagccac s gorGor5.CYUI01015385v1 4134320 4103 + 4267968 TTCTTCTCTCtgggaatatatgtaggagtgaaattgccacatcatgggaaacacttataatcagcattagtagaAAGAAAAAAGCAGTGTTTCAACATTTTACAACCAGTAGTGACTCCTGCTTGACCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttatgttttagatttgcatttatttgatgactaatgtctaataggcattggttgttcctttttcctttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgttaatttcttagtgttttatagATTTTGGACATATGTTCTGACTAGTGTataga--------tagatagatagatagatagatagatagatagatagatagatagataATGTGGAGATTATTGTCTATAAATTTATATAAGATATATATGTATCAGGAGTTTATCATTTATTGAGTGGATATGGTATAAATATTTTGTCACATGCTGTGTTTTATCTTTCCTTTTTGCTCTCTTTTTTTTGTTAAATTTTGTTTTTAATTTTTACCAAAACGTGAATCCTgttatgtgtcatttaacaatggggatatgttctgagaaatgaaccactaggtaattttgtcattgtgcgaacattgcagagtgtacttaaacctggatcatatagcttactatacatctaggctatttgatatggcctatt-ttttaaaattatactttaagttctggggtacatgtgcagaacgtgcaaatttgttacataagtgtacacgtgccatggtggtttgctgcacccatcaacccgtcatctacattaggtatttcacttaatgctatccctcctctatccccctactccctggcaggccccggtgtgtgatgttcccctccctgtgtccatgtgtgctccttgttcagctcccacttatgagtgagaacatacagtgtttggttttctgttcttgtgttagtttgctgagaataatggtttccagcttcatccatgtccctgcaaaggacatgaactcattctttttatggctacatagtattccatggtgtatatgtgccacattttctttatccagtctatcactgat-ggcatttgtgttggttccaagtctttgctattgcgaatagtgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcgtttgggtatatactcagtaatgggattgctggggcaaatggtatttctggttctagatccttcaggaattgccacactgtcttccacagtggttgaactaatttacagtcccaccaacagtgtaaaaatgtgcctatttctccacatcctctccagcctctgttgtttcttgcc-ttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttacatttctctaatgaccagtgatgatgagctttctttcatatgtttgttagctaaatgtcttcttttgagaagtgtctgttcatatccttcacccactttttgataggggttttgcccatgcctgtgtcctgaatggtaccgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtctttaatccatcttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatcctttccccattgcttgtttaagtgaggtttgtaaaagatgagatggttgtagatatgtggtgttatttctgaggtttctattctgttccattcgtctatacatctgttttggtactaataccatgca-tttggctactgtagccttgtagtatagtttgaagtcaggtagcatgatgcctccagctttgttctttttgctgaggattgtctcaactatgcaggctcttttttggttccatatgaaatttaaagtag---ttttttctaattctgtgaagaaagtcaatggtagcttgatggggatagcattgaatatataaattactttgggcagtatggtcattttcatgatattgattcttcctatccattagcatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttaaagaggtccttcacatctcatgtaagttgtatccctaagtattttgttctctttgtagcaattgtgaatgggcgttcactcatgatttggctctctgcttgtctattattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttgtcagcttaaggagtttttgggctgagacgatggggttttctaaatatagagtcatgtcatctgcatacaaagacaatttgacttcctctcttcctatttgagtatgctttatttctttctcttgcctgattactctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccttgtcttgtgttggttttcaaaggg-atgcctccagcttttgcccattcagtattatattatctgtgggtttgtcataaatagctcttatta-tttgagatacattccatcaatacctagtttattgagtg--tttttagcatgaaggggtgtcgaagtttattgaaggccttttcttcatctatcgagataatcatgtggtttttgtcattggttctattaatgtgatagattacatttattgatttgcgtatgttgaaccagccttgcatccgaggaatgaagtcgacttgattgttgtggataagctttgtaatgtggtgctggattcggtttgccagtattttatagaggattttcgcatcgatgttcatcagggatattggcttgagattttc-ttttttgttgtgtctttgaccagttttagtatcagaatgatgctggcctcataaaatgagttagggaggagcctacctttttctattgtttggaatagttttagaaggaatggtaccagctcctctttgtgcctctgatagaattcggctgtgaatccgtctggtcctgg--c-----tttt----------------ttttggttggtaggctattaattactgcctcaatttcagaacttgttattggtgtattcagggattcgaattcttcctagtttagtcttcggagggtgtgtgtgtccaggaattaatccatttcttctagattttctagtttatttgagtagaggtgtttatagtattctctgatggtagtttgtatttctgtgggatcagtggtaatct-cccctttatcattttttattgtgtctctttgagtctcctctc-tttcttctttattagtctggctagtggtctattttgtaaatcttttcaagaaatcaactcctggattcattgattttttgaagaattttttgtgtctctatctccttcagttctgctctgatcacagttatttcttgtcttttgcgagctgttgaatttgtttgctgttgcttctctagttcttttaattgtgatgttagggtttcgattttagatcgttcccactttctcatgtgggcatttggtgctataaatttccctctaaacactgctttagctgtgtcccagagattctggtacattgtgtctttgttctcattggtttcaaataacttatttatttctaccttaattttgttatttaccca-tagtcattcaggagcaggttgttcagtttccatgtagttgtgtggttttgagtgagtttctt------ttctttctttctttctttctttctttctttctttctttctttct------ttctttc-----ttttttgagacagagtcttgctctgtcacccaggctgtagtgcagtggcatgatcttggctcactgcaagctttgtctcccgggttcaagtaattctcctgcctcagcctcctgagtagctggaattacaggtgcttgccaccatgcctgcctaaa-tttttgtatttttcttagagacagggcttcaccgtgttagccagaatggtctcgatctcctaaccttgtgatctgccca-cttggcctcccaaagttctgggattacaggcatgagccac i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30179130 4083 - 77216781 TTCttctctctgggtatatatgtgggagtgaaattgccatgtcataggaaacacgtataatcagcattagtagaaagaaaaaagcagtgtttcaaCATTTTACAACTGGTAGTGACTCCTGCTTGATCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttgtgttttagatttgcatttatttgatgactaatgtctattaggcattggttgttgctctttcttttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgtcagtttcttagtgttttgtagattttggatatatGTCCTGACTAGTAT----------------atagatagatagatagatagatagatagatagatagatagataAAATGGAGATCATTGTCTATAAACTTATATAAGATATATATGTATCAGGAGTTTATCATTTATTGAATGGATATGTTATAAAT-TTTTATCACATGCTGTGTTGTATCTTTCCTTTTTGCTCTCTTTTTTTGGTTAAATTTTGTTTTTAATTTTTACCAAAACGTGAATCTTgttatgtgtcatttaacaatggggatatgttctgagaaatgaaccattaggtaattttgtcattgtgcaaacattgtagcatgtacttaaacctagatcatatagcttactacacatctaggctatttgatatggcctattgttTAAAAattatactttaagttctggggtacatgcgcagaacgtgcaaatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaggcatttctcctaatactatccctcccctagcccctcaccctctcacaggccccggtgtgtgatgtttccctcccggtgtccatgtgtgctcattgtttaactcccacttatgagtgagaatatgtggtgtttggttttctgttcctgtgtgagtttgctgagaatgatgatttccagcgtcatccatgtccccacaaaggacatgaactcatcctttttatggctatgtagtattccatggtgtgtatgtgccacattttctttatccagtctatcattgatgggtatttgtgttggttccaagtctttactattgtgaacactgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcgtttgggtatacgctcagtaataggattgctggggcaaatggtatttctggttctagatctttcaggaattgccacactatcttccacaatggttgaactaatttacactcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcatctgttgtttcttgactttttaatgattgccattctaactggcgtgagatggtatctcattgtggttttgatttacatttctctaatgactagtgatgatgagctttctttcatatatttgttagctaaatgtcttcttttgagaagtgtctcttcacgtccttcacccactttttgatagggATtttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtctttaacccatcttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccagtttccccaacatcatttattaaatagggaagcctttccccattgcttgtttttgtgaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtttctattctgttccattggtctatatatctgttttggtaccagtaccatgcgttttggctactgtagccttgtagtatagtttgaagacaggtagcatgatgcctccagctttgttctttttgctgaggattgtcttggctatacgggctcttttttggttccatatgaactttaaagta--ttttttttctaattctgtgagtaaagtcaatggtagcttgatggggatagcattgaatgtagaaattactttgggcagtatggtcattttcatgatattgattcttcctatccatgagtatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttgtattcctaagcatttcattctctttgcagcaattgtgaatgggagttcacttatgatttgactctctgcttgtctattattggtgtataggaatgtttgtggtttttgcacattgattgtgtatcctgagactttgctgaagttacttatcagcttagggagtttttaggctgagatgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatacactttatttctttctcttgcctgattaccctggccagaacttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccggttttcaaagggaatgtctccagcttttgcccatttagtatgatattgtctgtgggtctgtcataaatagctcttattattttgagatacgttccatcaatacctagtttattgagagt-tttttagtatgaagggctgttgaagtttattgcaggccttttctgcatctattgagataatcatgtggtttttgtcattggttcttttaatgtgatgggttacatttattgacttgcgtacattgaaccagccttgcgtcggagggatgaagccgagttgattgtggtggataagctttgtaatgtggtgctggatttggtttgccagtattttagagaggattttcgcatcaatgttcatcagggatattggcttgaagttttctttttctgttgtgtttttgcactgttttagtatcaggatgatgctggcctcataaaatgagttagggaggagactctctttgtctattgtttggaataattttagaaggaatggtaccagctcctctttgtacctctgatagaattcatctgtgaatctgtctggtcttgggctttttattttattttattttattttattttggttggtaggctattaattactgcctcaatttcagaacttgttattggtgtattcagggattcgaattcttcctggtttagtcttgggagggtgtatgtatccaggaattaatccatttcttctagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttccatggaatcagtggtgatct-cccctttatcattttttattgtgtctctttgattcttctttcttttcttctttattagtctggctagcagtctattttgtaaatcttttcaagaaaccagctcctggattcactgattttttgaaggattttttgtgtctctatctccttcagttctgctctgatctcagttatttcttgcctcctgctagctactgaatttgtttgctgttgcttctctagttcttttaattgtgatgttagggtgtcgattttagatctttcccactttctcatgtgggcatttagtgctataaatttctctctaaacactgctttagctgtgtttcagagattctggtacattgtgtctctgttctcattggtttcaaagaacttatttatttctaccttaatttcgttatttacccagtagtcattcaggagcaggttgttcagtttccatgtagttgtgtggctttgagtgaatttctt-----------------------------------------------------------tttc-----tcttttgatatggagtctcactctgtcacccacgctgtagtgcagtggcgtgatcttggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcttcctgagtagttggagttacaggtgcgtgccaccatgcctgtctaatttttttgtatttttcgtagagacagggtttcaccatgttagccagaatggtcttgatctcctgaccttgtgatatgcccaccttggccttccaaagtgctgggattagaggcgtgagccac i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28089444 4084 - 80997621 TTCttctctctgggtatatatgtgggagtgaaattgccatgtcataggaaacacgtataatcagcattagtagaaagaaaaaagcagtgtttcaacattttacaactggtagtgactcctgcttgatcctaatattgtgaaccttctgaattgtactggtatgtatttgtgttttagatttgcatttatttgatgactaatgtctattaggcattggttgttgctctttcttttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgtcagtttcttagtgttttgtagattttggatatatGTCCTCACTAGTGT----------------atagatagatagatagatagatagatagatagatagatagataAAATGGAGATCATTGTCTATAAACTTATATAAGATATATATGTATCAGGAGTTTATCATTTATTGAATGGATATGTTATAAAT-TTTTATCACATGCTGTGTTGTATCTTTCCTTTTTGCTCTCTTTTTTTGGTTAAATTTTGTTTTTAATTTTTACCAAAACGTGAATCCTgttatgtgtcatttaacaatggggatatgttctgagaaatcaaccattaggtaattttgtcattgtgcaaacattgtagcatgtacttaaacctagatcatatagcttactacacatctaggctatttgatatggcctattgttTAAAAattatactttaagttctggggtacatgcgcagaacgtgcaaatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaggtatttctcctaatactatccctcccctagcccctcaccctctcacaggccccggtgtgtgatgttcccctcccggtgtccatgtgtgctcattgtttaactcccacttatgagtgagaatatgtggtgtttggttttctgttcctgtgtgagtttgctgagaatgatgatttccagcgtcatccatgtccccgcaagggacatgaactcatcctttttatggctatgtagtattccatggtgtgtatgtgccacattttctttatccagtctatcattgatgggtatttgtgttggttccaagtctttactattgtgaacactgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcgtttgggtatacgctcagtaataggattgctggggcaaatggtatttctggttctagatctttcaggaattgccacactatcttccacaatggttgaactaatttacactcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcatctgttgtttcttgactttttaatgattgccattctaactggcgtgagatggtatctcattgtggttttgatttacatttctctaatgactagtgatgatgagctttctttcatatatttgttagctaaatgtcttcttttgagaagtgtctcttcacgtccttcacccactttttgatagggATtttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtctttaacccatcttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccagtttccccaacatcatttattaaatagggaagcctttccccattgcttgtttttgtgaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtttctattctgttccattggtctatatatctgttttggtaccagtaccatgcgttttggctactgtagccttgtagtatagtttgaagacaggtagcatgatgcctccagctttgttctttttgctgaggattgtcttggctatacgggctcttttttggttccatatgaactttaaagtag-ttttttttctaattctgtgagtaaagtcaatggtagcttgatggggatagcattgaatgtagaaattactttgggcagtatggtcattttcatgatattgattcttcctatccatgagtatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttgtattcctaagcatttcattctctttgcagcaattgtgaatgggagttcacttatgatttgactctctgcttgtctattattggtgtataggaatgtttgtggtttttgcacattgattgtgtatcctgagactttgctgaagttacttatcagcttagggagtttttaggctgagatgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatacactttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccctgtcttgtgccggttttcaaagggaatgtctccagcttttgcccatttagtattatattgtctgtgggtctgtcataaatagctcttattattttgagatacgttccatcaatacctagtttattgagagt-tttttagtatgaagggctgttgaagtttattgcaggccttttctgcatctattgagataatcatgtggtttttgtcattggttcttttaatgtgatgggttacatttattgacttgcgtacattgaaccagccttgcgtcggagggatgaagccgagttgattgtggtggataagctttgtaatgtggtgctggatttggtttgccagtattttagagaggattttcgcatcaatgttcatcagggatattggcttgaagttttctttttctgttgtgtttttgcactgttttagtatcaggatgatgctggcctcataaaatgagttagggaggagactctctttgtctattgtttggaataattttagaaggaatggtaccagctcctctttgtacctctgatagaattcatctgtgaatctgtctggtcttgggctttttattttattttattttattttattttggttggtaggctattaattactgcctcaatttcagaacttgttattggtgtattcagggattcgaattcttcctggtttagtcttgggagggtgtatgtatccaggaattaatccatttcttctagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttccatgggatcagtggtgatct-cccctttatcattttttattgtgtctctttgattcttctttcttttcttctttattagtctggctagcagtctattttgtaaatcttttcaagaaaccagctcctggattcactgattttttgaaggattttttgtgtctctatctccttcagttctgctctgatctcagttatttcttgcctcctgctagctactgaatttgtttgctgttgcttctctagttcttttaattgtgatgttagggtgtcgattttagatctttcccactttctcatgtgggcatttagtgctataaatttctctctaaacactgctttagctgtgttccagagattctggtacattgtgtctctgttctcattggtttcaaagaacttatttatttctaccttaatttcgttatttacccagtagtcattcaggagcaggttgttcagtttccatgtagttgtgtggctttgagtgaatttctt-----------------------------------------------------------tttc-----tcttttgatatggagtctcactctgtcacccacgctgtagtgcagtggcgtgatcttggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcttcctgagtagttggagttacaggcgcgtgccaccatgcctgtctaatttttttgtatttttcgtagagacagggtttcaccatgttagccagaatggtctcgatctcctgaccttgtgatatgcccaccttggccttccaaagtgctgggattagaggcgtgagccac i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2135872 4079 + 10377808 TTCttctctctgggtatatatgtgggagtgaaattgccatgtcataggaaacacgtataatcagcattagtagaAAGAAAAAAGCAGTGTTTCAACATTTTACAACTGGTAGTGACTCCTGCTTGATCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttgtgttttagatttgcatttatttgatgactaatgtctattaggcattggttgttgctctttcttttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgtcagtttcttagtgttttgtagATTTTGGATATATGTCCTGACTAGTGg----------------atagatagatagatagatagatagatagatagatagatagataAAATGGAGATCATTGTCTATAAACTTATATAAGATATATATGTATCAGGAGTTTATCATTTATTGAATGGATATGTTATAAAT-TTTTATCACATGCTGTGTTGTATCTTTCCTTTTTGCTCTCTTTTTTTGGTTAAATTTTGTTTTTAATTTTTACCAAAACGTGAATCCTgttatgtgtcatttaacaatggggatatgttctgagaaatgaaccattaggtaattttgtcattgtgcaaacattgtagcatgtacttaaacctagatcatatagcttactacacatctaggctatttgatatggcctattgttTAAAAattatactttaagttctggggtacatgcgcagaacgtgcaaatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaggtatttctcctaatactatccctcccctagcccctcaccctctcacaggccccggtgtgtgatgttcccctcccggtgtccatgtgtgctcattgtttaactcccacttatgagtgagaatatgtggtgtttggttttctgttcctgtgtgagtttgctgagaatgatgatttccagcgtcatccatgtccccgcaaaggacatgaactcatcctttttatggctatgtagtattccatggtgtgtatgtgccacattttctttatccagtctatcattgatgggtatttgtgttggttccaagtctttactattgtgaacactgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcgtttgggtatacactcagtaatacgattgctggggcaaatggtatttctggttctagatctttcaggaattgccacactatcttccacaatggttgaactaatttacactcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcatctgttgtttcttgactttttaatgattgccattctaactggcgtgagatggtatctcattgtggttttgatttacatttctctaatgactagtgatgatgagctttctttcatatatttgttagctaaatgtcttcttttgagaagtgtctcttcacgtccttcacccactttttgatagggATtttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtctttaacccatcttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccagtttccccaacatcatttattaaatagggaagcctttccccattgcttgtttttgtgaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtttctattctgttccattggtctatatatctgttttggtaccagtaccatgcgttttggctactgtagccttgtagtatagtttgaagacaggtagcatgatgcctccagctttgttctttttgctgaggattgtcttggctatacgggctcttttttggttccatatgaactttaaagtag-ttttttttctaattctgtgagtaaagtcaatggtagcttgatggggatagcattgaatgtagaaattactttgggcagtatggtcattttcatgatattgattcttcctatccatgagtatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttgtattcctaagcatttcattctctttgcagcaattgtgaatgggagttcacttatgatttgactctctgcttgtctattattggtgtataggaatgtttgtggtttttgcacattgattgtgtatcctgagactttgctgaagttacttatcagcttagggagtttttaggctgagatgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatacactttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccctgtcttgtgccggttttcaaagggaatgtctccagcttttgcccatttagtattatattgtctgtgggtctgtcataaatagctcttattattttgagatacgttccatcaatacctagtttattgagagt-tttttagtatgaagggctgttgaagtttattgcaggccttttctgcatctattgagataatcatgtggtttttgtcattggttcttttaatgtgatgggttacatttattgacttgcgtacattgaaccagccttgcgtcggagggatgaagccgagttgattgtggtggataagctttgtaatgtggtgctggatttggtttgccagtattttagagaggattttcgcatcaatgttcatcagggatattggcttgaagttttctttttctgttgtgtttttgcactgttttagtatcaggatgatgctggcctcataaaatgagttagggaggagactctctttgtctattgtttggaataattttagaaggaatggtaccagctcctctttgtacctctgatagaattcatctgtgaatctgtctggtcttgggct-----ttttattttattttattttattttggttggtaggctattaattactgcctcaatttcagaacttgttattggtgtattcagggattcgaattcttcctggtttagtcttgggagggtgtatgtatccaggaattaatccatttcttctagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttccatgggatcagtggtgatct-cccctttatcattttttattgtgtctctttgattcttctttcttttcttctttattagtctggctagcagtctattttgtaaatcttttcaagaaaccagctcctggattcactgattttttgaaggattttttgtgtctctatctccttcagttctgctctgatctcagttatttcttgcctcctgctagctactgaatttgtttgctgttgcttctctagttcttttaattgtgatgttagggtgtcgattttagatctttcccactttctcatgtgggcatttagtgctataaatttctctctaaacactgctttagctgtgttccagagattctggtacattgtgtctctgttctcattggtttcaaagaacttatttatttctaccttaatttcgttatttacccagtagtcattcaggagcaggttgttcagtttccatgtagttgtgtggttttgagtgaatttctt-----------------------------------------------------------tttc-----tcttttgatatggagtctcactctgtcacccacgctgtagtgcagtggcgtgatcttggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcttcctgagtagttggagttacaggcgcgtgccaccatgcctgtctaatttttttgtatttttcgtagagacagggtttcaccatgttagccagaatggtctcgatctcctgaccttgtgatatgcccaccttggccttccaaagtgctgggattagaggcgtgagccac i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2042689 4085 - 8458610 TTCttctctctgggtatatatgtaggagtgaaattgccatgtcataggaaacacgtataatcagcattagtagaAAGAAAAAAGCAGTGTTTCAACATTTTACAACTGGTAGTGACTCCTGCTTGACCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttgtgttttagatttgcatttatttgatgactaatgtctattaggcattggttgttgctctttcttttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgtcagtttcttagtgttttgtagATTTTGGATATATGTCTTGACTAGTGTataga--------tagatagatagatagatagatagatagatagatagatagatagataAAATGGAGATCATTGTCTATAAACTTATATAAG-TATATATGTATCAGGAGTTTATCATTTATTGAATGGATATGTTATAAAT-TTTTATCACATGCTGTGTTGTATCTTTCCTTTTTGCTCTCTTTTTTTTGTTAAATTTTGTTTTTAATTTTTACCAAAACGTGAATCCTgttatgtgtcatttaccaatggggatatgttctgagaaatgaaccattaggtaattctgtcattgtgcgaatattgtagcatgtacttaagcctagatcatatagcttactacacatctaggctatttgatatggcctattgttTAAAAattatactttaagttctggggtacatgtgcagaacgtgcaaatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaagtatttctcctaatactatccctcccctagcccctcaccctctcacaggccccggtgtgtgatgttcccctcccggtgtccatgtgttctcattgttcaactcccacttatgagtgagaatatgtggtgtttggttttctgttcctgtgtgagtttgctgagaatgatgatttccagcatcatccatgtccccgcaaaggacatgaactcatcctttttatggctatgtagtattccatggtgtgtatgtgccacattttctttatccagtctatcattgatgggtatttgtgttggttccaagtctttactattgtgaacactgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcgtttgggtatacgctcagtaataggattgctggggcaaatggtatttctggttctagatctttcaggaattgccacactatcttccacaatggttgaactaatttacactcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcatctgttgtttcttgactttttaatgattgccattctaactggcatgagatggtatctcattgtggttttgatttacatttctctaatgactagtgatgatgaactttctttcatatatttgttagcgaaatgtcttcttttgagaagtgtctcttcacgtccttcacccactttttgatagggATtttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtc-ttaatccatcttgagttaatttttgtataaggtgtaaggaaggggtctagtttcagttttctgcatatggctagccagtttccccaacatcatttattaaatagggaagcctttccccattgcttgtttttgtgaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtttctattctgttccactggtctatatatctgttttggtaccagtaccatgcgttttggctactgtagccttgtagtatagtttgaagacaggtagcatgatgcctccagctttgttctttttgctgaggattgtcttggctatacgggctcttttttggttccatatgaactttaaagtag-ttttttttctaattctgtgggtaaagtcaatggtagcttgatggggatagcattgaatgtagaaattactttgggcagtatggtcattttcatgatattgattcttcctatccatgagtatgaaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttgtattcctaagcatttcattctctttgcagcaattgtgaatgggagttcacttatgatttgactctctgcttgtctattattggtgtataggaatgtttgtggtttttgcacattgattgtgtatcttgagactttgctgaagttgcttatcagcttagggagtttttaggctgagacgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatacactttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccctgtcttgtgccggttttcaaagggaatgtctccagcttttgcccatttagtatgatattgtctgtgggtctgtcataaatagctcttattattttgagatacgtttcatcaatacctagtttattgagagt-tttttagcatgaagggctgttgaagtttattgaagaccttttctgcatctattgagataatcatgtggtttttgtcattggttcttttaatgtgatggattacatttattgacttgcatacgttgaaccagccttgcatcggagggatgaagccgagttgattgtggtggataagctttgtaatgtggtgctggatttggtttgccagtattttagagaggattttcgcatcaatgttcatcagggatattggcttgaagttttctttttctgttgtgtttttgcactgttttagtatcaggatgatgttggcctcataaaatgagttagggaggagactctctttgtctattgtttggaataattttagaaggaatggtaccagctcctctttgtacctctgatagaattcatctgtgaatccgtctggtcttgggat-----ttttattttattttattttattttggttggtaggctattaattactgcctcaatttcagaacttgttattggtgtattcagggattcgaattcttcctggtttagtcttgggaaggtgtatatatcctggaattaatccatttcttctagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttccatgggatcagtggtgatct-cccctttatcattttttattgtgtctctttgattcttctttcttttcttctttattagtctggctagcagtctattttgtaaatcttttcaagaaaccagctcctggattcactgattttttgaaggattttttgtgtctctatctccttcagttctgctctgatctcagttatttcttgccttctgctagctactgaatttgtttgctgttgcttctctagttcttttaattgtgatgttagggtgtcgattttagatctttcccactttctcatgtgggcatttagtgctataaatttccctctaaacactgctttagccgtgtcccagagattctggtacattgtgtctctgttctcattggtttcaaagaacttatttatttctaccttaatttcgttatttacccagtagtcattcaggagcaggttgttcagtttccatgtagttgtgtggctttcagtgaatttctt-----------------------------------------------------------tttc-----tcttttgatatggagtctcactctgtcacccacgctgtagtgcagtggcgtgatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcttcctgagtagttggagttacaggcgcgtgccaccatgcctgtctaatttttttgtatttttcgtagagacagtgtttcaccatgttagccagaatggtctcgatctcctgaccttgtgatatgcccaccttggccttccgaagtgctgggattacaggcttgagccac i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64975726 4096 + 75148670 TTCttctctctgggtatatatgtaggagtgaaattgccatgtcataggaaacacgtataatcagcattagtagaAAGAAAAAAGCAGTGTTTCAACATTTTACAACCAGTAGTGACTCCTGCTTGACCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttgtgctttagatttgcatttatttgatgactaatgtctattaggcattggttgttgctctttcctttttcataagatgcctgttcaagtcttctacccatacttcttcgtggttgtcaatttcttagtgttttatagattttggatatatgtcctggctaGTGTatagatagataggtagatagatagatagatagatagatagatagatagatagatagataATGTGGAGATCATTGTCTATAAACTTGTATAAGATATATATGTATCAGGAGTTTATCATTTATTGAATAGATATGTTATAAATATTTTATCACATGTTGTGTTGTATGTTTCCTTTTTGCTCTCTTTTTTTGGTTAAATTTTGTTTTTAATTTTTACCAAAACGTGAATCCTAttatgtgtcatttaacaatggggatatgttctgagaaatgaaccattaggtaattttatcattgtgcgaacattgtagagtgtacttaaacctagatcatacagcttactacacatctaggctatttgatatggcctattgttTAAAAattatactttaagttctggggtacatgcaaagaacgtgcaaatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaggtatttctcctaatgctacccctcccctagcccctcaccccccaacaggccctggtgtgtgatgttcccctctctgtgtccatatgttctcattgttcaactcccacttatgagtgagaatatacggtgtttggttttctgttcctgtgtgagtttgctgagaatgatgatttccagcttcatccatgtccccgcaaaggacatgaactcatcctttttatggctatgtagtattccatggtgtgtatgtgccacattttctttatccagtctatcattgatgggtgtttgtgttggttccaagtctttactattgtgaacagtactgcaataaacatatgtgtgcatgtgcctttacagtagaataatttataatcatttgggtatacactcagtaatgggattgctggggcaaacggtatttctggttctagatccttcaggaattgccacattgtcttccacaatggttgaactaatttacactcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcatctgttgtttcttgactttttaatgattgccattctaaccggcgtgagatggtatctcattgtggttttgatttacgtttctctaatgaccagtgatgatgagctttctttcatatatttgttagctaaatgtcttcttttgagaagtgtctcttcatatccttcacccactttttgatagggGTtttgcccatgcctatgtcctcaatggtattgcctaggttttcttctagggtttttatggttttaggtcttatgtttaagtctttaatccattttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccggtttccccaacatcgtttgttaaatagggaaggctttccccattgcttgtttttgtgaggtttgtcaaagatcagattgttgtagatgtgtggtgttatttctgaggtttctattctgttccattggtctatacatctgttttggtaccagtaccatgcgttttggctactgtagccttgtagtatagtttgaagacagatagcatgatgcctccagctttgttctttttgctgaggattgtctcagctatgcgggctcttttttggctccatatgaaatttaaagtag--tttttttctaattctgtgaagaaagtcaatggtagcttgatgtggatagtattgaatgtataaattactttgggcagtatggtcattttcacaatattgattcttcctatccatgagcatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttgaaaaggtccttcatatccctt-taagttgtattcctaagcattttattctctttgcagcaattgtgaatgggagttcactcatgatttggctctctggttgtctattattggtgtataggaatgtttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttagggagtttttaggctgagatgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatttgaatacactttatttctttctcttgcctgattaccctggccagaacttccaacgctatgttgagtaggagtggtgagagagggcatccttgtcttgtgccggttttcaaagggaatgtctccagcttttgcccatttagtattatattgtctgtgggtctgtcaaaaatagctcttattattttgagatacgttccatcaatacctagtttatt--gagtgtttttagcaagaaggggtgttgaagtttattgaaggccttttctgcatctattgagatcatcatgtggtttttgtcattggttcttttaatgtgatggattacatttattgatgtgcgtacgttgaaccagccttgcatcggagagatgaagccgagttgattgtggtggataagctttgtaatgtggtgctggatttggtttg-cagtattttagagaggatttttgcatcaatgttcatcagggatattgacttgaaattttctttttttgttgtgtttttgcatggttttagtatcaggatgacgctggccccataaaatgagttaggggggagtctctctttgtctattgtttggaataattttagaaagaatggtaccagctcctctttgtacctctgatagaattcatctgtgaatctgtctggttttgggcttttc-ttttcttttcttttctttttttttggttggtaggctattaattacggcctcaatttcaggacttgttattggtgtattcagggattcgaattcttcctggtttagtcttgggagggtgtatgtgtccaggaattaatccatttcttctagattttctagtttatttgcatagaggtgtttatagtattctctgatggtagtttgtatttccatggaatcagtggtgatctccccctttatcattttttattgtgtctctttgattcttctttcttttcttctttattagtctggctagcagtctattttgtaaatcttttcaagaaaccagctgctggatgcactgattttttgaaggattttttgtgtctctatctccttcagttctgctctgatcttagttatttcttgccttctgctagctactgaatttgtttgctgttgcttctctagttcttttaattgtaatgttagggtgtcgattttagatctttcccactttctcatgtgggcatttagtgctataaatttccctctaaacactgctttagctgtgtcccagagattctggtacattgtgtctctgttctcattggtttcaaagaacttatttatttctaccttaatttcgttatttacccagtagtcattcaggagcaggtcgttcagtttccatatagttgtgtggctttcagtgaAtttctt-----------------------------------------------------------tttt-----tcttttattacggagtctcgctctgtcacccaggctatagtgcagtggcgtgatcttggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagttttctgagtagttggagttacaggcgcgtgccaccatgcgtgtctaatttttttgtatttttcgtagagacagggtttcaccatgttagccagaatggtctcgatctcctgaccttgtgatccgcccgcctcggcc-tccaaagtgctgggattacaggcgtgagccac i chlSab2.chr16 C 0 I 27 s manLeu1.NW_012106252v1 2237434 4055 + 4244037 TTCttctctctgggtatatatgtaggagtgaaattgccatgtcataggaaacacgtataatcagcattagtagaAAGAAAAAAGCAGTGTTTCAACATTTTACAACCGGTAGTGACTCCTGCTTGACCCTAATATTGTGAACCTTCTGAATtgtactggtatgtatttgtgttttagatttgcatttatttgatgactaatgtctattaggcattggttgttgctctttcttttttcataagatgcctgttcaagtcttctacccatacttcttcatggttgtcagtttcttagtgttttgcagATTTCGGATATATGTCTTGACTAGTGTataga--------tagatagatagatagatagatagatagatagatagatagatagataAAATGGAGATCATTGTCTATAAAC--ATATAAGATATATATGTATCAGGAGTTTATCATTTATTGAATGGATATGTTATAAAT-TTTTATCACATGCTGTGTTGTATCTTTCCTTTTTGCTCTCTTTTTTTTGTTAAATTTTGTTTTTAATTTTTACCAAAACATGAATCCTGTTA--TgtcatttaacaatggggatatgttctgagaaatgaaccattaggtaattttgtcattgtgcgaacattgtagcatgtacttaaacctagatcatatagcttactacacatctaggctatttgatatggcctattgttTAAAAattatactttaagttct-gggtacatgcgcagaacgtgcaaatttgttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaggtatttctcctaatactatccctcccctagcccctcaccctctcacaggccccggtgtgtgatgttcccctcccggtgtccatgtgttctcattgttcatctcccacttatgagtgagaatatgtggtgtttggttttctgttcctgtgtgagtttgctgagaatgatgatttccagcatcatccatgtccccgcaaaggacatgaactcatcctttttatggctatgtagtattccatggtgtgtatgtgccacattttctttatccagtctatcattgatgggtatttgtgttggttccaagtctttactattgtgaacactgctgcaataaacatatgtgtgcatgtgcctttatagtagaatgatttataatcgtttgggtatacgctcagtaataggattgctggggcaaatggtatttctggttctagatctttcaggaattgccacactatcttccacaatggttgaactaatttacactcccaccaacagtataaaagtgttcctatttctccacatcctctccagcatctgttgtttcttgactttttaatgattgccattctaactggcgtgagatggtatctcattgtggttttgatttacatttctctaatgactagtgatgatgagctttctttcatatatttgttagctaaatgtcttcttttgagaagtgtctcttcacgtccttcacccactttttgatagggATtttgcccatgcctatgtcctgaatggtattgcctaggttttcttctacggtttttatggttttaggtcttatgtttaagtctttaatccatcttgagttaatttttgtataaagtgtaaggaaggggtccactttcagttttctgcatatggctagccagtttccccaacatcatttattaaatagggaagcctttccccattgcttgtttttgtgaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggtttctattctgttccattggtctatatatctgttttggtaccagtaccatgcgttttggctactgtagccttgtagtatagtttgaagacaggtagcatgatgcctccagctttgttctttttgctgaggattgtcttggctatacgggctcttttttggttccatatgaactttaaagtagtttttttttctaattctgtgagtaaagtcaatggtagcttgatggggatagcattgaatgtagaaattactttgggcagtatggtcattttcatgatactgattcttcctatccatgagtatggaatgtttttccatttgtttgtgtcctcttttatttccttgagcagtggtttgtagttctccttgaagaggtccttcatatcccttgtaagttgtattcctaagcatttcattctctttgcagcaattgtgaatgggagttcacttatgatttgactctctgcttgtctgttattggtgtataggaatgtttgtggtttttgcacattgattgtgtatcctgagactttgctgaagttgcttatcagcttagggagtttttaggctgagacgatggggttttctaaatatagaatcatgtcatctgcaaacaaagacaatttgacttcctctcttcctatctgaatacactttatttctttctcttgcctgattaccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccctgtcttgtgccggttttcaaagggaatgtctccagcttttgcccatttagtattatattgtctgtgggtctgtcataaatagctcttattattttgagatacattccatcaatacctagtttattgagagtttttttagcatgaagggctgttgaagtttattgaaggccttttctgtatctattgagataatcatgtggtttttgttattggttcttttaatgtgatggattacatttattgacttgcgtacgttgaaccagccttgcgtcggagggatgaagccgagttgattgtggtggataagctttgtaatgtggtgctggatttggtttgccagtattttagagaggactttcgcatcaatgttcatcagggatattggcttgaagttttctttttctgttgtgtttttgcactgttttagtatcaggatcatgctggcctcataaaatgagttagggaggagactctctttgtctattgtttggaataattttagaaggaatagtaccagctcctctttgtacctctgatagaattcatctgtgaatccgtctggtcttgggct-----ttttattttattttattttattttggttggtaggctattaattactgcctcaatttcagaacttgttattggtgtattcagggattcgaattcttcctggtttagtcttgggaaggtgtgtgtatccaggaattaatccatttcttctagattttctagtttatttgcgtagaggtgtttatagtattctctgatggtagtttgtatttccatgggatcagtggtgatct-cccctttatcattttttattgtgtctctttgattcttctttcttttcttctttattagtctggctagcagtctattttgtaaatcttttcaagaaaccagctcctggattcactgattttttgaaggattttttgtgtctctatctccttcagttctgct---------------------cttctgctagctactgaatttgtttgctgttgcttctctagttcttttaattgtgatgttagggtgttgattttagatcattcccactttctcgtgtgggcatttagtgctataaatttctctctaaacactgctttagccatgtcccagagattctggtacattgtgtctctgttctcattggtttcaaagaacttatttatttctgcctttattttgttatttacccagtagtcattcaggagcaggttgttcagtttccatgtagttgtgtggctttc--------tctt-----------------------------------------------------------tttt-----tcttttgatacggagtctcactctgtcacccaggctgtagtgtagtggcatgatcttggcttactgcaacctctgcctcccgggttcaagcaattctcctgcctcagctttctgagtagttggagttacaggcgcgtgccaccatgcctgtctaatttttttgtatttttcgtagagacagggtttcaccatgttagccagaatggtctcgatctcctgaccttgtgatatgcccacctcggccttccaaagtgctgggattataggcatgagccac i manLeu1.NW_012106252v1 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T a score=412286.000000 s hg38.chr17_JH159148v1_alt 75821 233 + 88070 cgtgcctggccttgagtgagtttcttaatccttagttctaatttgattgcactgtgatctgagagactgttttacttccaattatg-tggtgaaatttagagtgctatgttgtagtgagaagaatgtttattctgttgatttcaggtggagagttctgtagatgtctattaggtccac-ttggtccag--agttgatttcaagtcctgaatatccttg-ttaattttctgtctcattg s gorGor5.CYUI01015385v1 4138423 233 + 4267968 cgtgcctagccttgagtgagtttcttaatccttagttctaatttgattgcactgtgatctgagagactgttttacttccaattatg-tggagaaatttagagtgctatgttgtggtgagaagaatgtttattctgttgatttggggtggagagttctgtagatgtctattagatccac-ttggtccag--agctgatttcaactcctgaatatccttg-ttaattttctgtctcattg i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30183213 232 - 77216781 tgtgcccgaccttgagtgagtttcttaatcctgagttctaatttgattgcactgtgatctgagagactgttttacttccaattatg-tggtcaaacttagagtgttatgttgtactgagaagaatgtata-tctgttgatttggagtggagagttctgtagatgtctgttaggtccac-ttggtccag--agctgatttcaagtcctgaatatccttg-ttaattttctgtctcattg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28093528 232 - 80997621 tgtgcccgaccctgagtgagtttcttaatcctgagttctaatttgattgcactgtgatctgagagactgttttacttccaattatg-tggtcaaacttagagtgttatgttgtactgagaagaatgtata-tctgttgatttggagtggagagttctgtagatgtctattaggtccac-ttggtccag--agctgatttcaagtcctgaatatccttg-ttaattttctgtctcattg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2139951 236 + 10377808 tgtgcccgaccttgagtgagtttcttaatcctgagttctaatttgattgcactgtgatctgagagactgttttacttccaattatgctggtcaaacttagagtgttatgttgtactgagaagaatgtata-tctgttga-ttggagtggagagttctgtagatgtctattaggtccactttggtccagcaagctgatttcaagtcctgaatatccttgtttaattttctgtctctttg i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2046774 232 - 8458610 tgtgcccgaccttgagtgagtttcttaatcctgagttctaatttgattgcactgtgatctgagagactgttttacttccaattatg-tggtcaaacttagagtgttatgttgtactgagaagaatgtata-tctgttgatttggagtggagagttctgtagatgtctattaggtccac-ttggtccag--agctgatttcaagtcctgaatatccttg-ttaattttctgtctcattg i cerAty1.NW_012006043v1 C 0 C 0 s manLeu1.NW_012106252v1 2241489 233 + 4244037 tgtgcctggccttgagtgagtttcttaatcctgagttctaatttgattgcactgtgatctgagagactgttttacttccaattatg-tggtcaaacttatagtgttatgttgtgctgagaagaatgtatattctgttgatttggggtggagagttctgtagatgtctattaggtccac-ttggtccag--agctgatttcaagtcctgaatatccttg-ttaattttctgtctcATTG i manLeu1.NW_012106252v1 C 0 I 334 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I a score=180833.000000 s hg38.chr17_JH159148v1_alt 76054 167 + 88070 ttctgtctgatattgacagtggggtgttaaagtct-cc--c----acttttttttttttgagatggagtcttgctctgtcgcccaggctgtagtgcggtggt-gtgatctcggttcactgcaacctccacttcctgggctca-------ctcctgcctcagcctcctgagtagctgggatta s gorGor5.CYUI01015385v1 4138656 167 + 4267968 ttccgtgtaatattgacagtggggtgttaaagtct-cc--c---tttttttttttttttgagatggagtcttgctccgtcgcccaggctgtagtgcggtggt-gtgatctcggttcactgcaacct-cacttcctgggctca-------ctcctgcctcagcctcctgagtagctgggatta i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30183445 174 - 77216781 ttctgtctaatattgacagttgagtgttaacgtct-cctac---ttttttttttttttttagatggagtct---tctgtcgcccaggctatagtgcagtggt-gcaatgttggttcactgcaacctccacctcctgggctcaagcaattctcctgcctcagcctcctgagtagctgggatta i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28093760 174 - 80997621 ttctgtctaatattgacagttgagtgttaacgtct-cctac---ttttttttttttttttagatggagtct---tctgtcgcccaggctatagtgcagtggt-gcaatgttggttcactgcaacctccacctcctgggctcaagcaattctcctgcctcagcctcctgagtagctgggatta i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2140187 172 + 10377808 -tctgtctaatattgacagttgagtgttaacgtctccctac---ttttttttttttttttagatggagtct---tctgtcgcccaggctatagtgcagtggt-gcaatcttggttcactgcaacctccacctcct-ggctcaagcaattctccc-ctgcagcctcctgagtagctgggatta i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2047006 173 - 8458610 ttctgtctaatattgacagtggagtgttaatgtct-cctactttttttttttttttttttagatggagtct---tctgtc-cccaggctat-gtgcagtggtggcgatcttggttcactgcaacctccacctcct-ggctcaagcaa--ctcctgcctcagcctcctgagtagctgggatta i cerAty1.NW_012006043v1 C 0 I 200 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2241722 334 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I a score=94191.000000 s hg38.chr17_JH159148v1_alt 76221 132 + 88070 taggcacgtgccacaatgcctggttaa-----------tttttttttgtatttttagtagagacggggtttcaccatgttatccaggatggtctccatctcctgac-ctcatgatctgcccg-cctcggcctcccaaagtgctgg s gorGor5.CYUI01015385v1 4138823 135 + 4267968 aaggcacgtgccacaatgcctggttaa--------ttttttttttttgtatttttagtagagacggggtttcaccatgttatccaggatggtctccatctcctgac-ctcatgatctgcccg-cctcggcctcccaaagtgctgg i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30183619 140 - 77216781 caggcacgagccaccatgcctgct--a-tttttttttttttttttttgtatttttagtagagactgggtttcactgtgttagccaggatggtctcgatctcctgac-cttgtgatctgcccg-cctcggcctcccaaagtgctgg i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28093934 141 - 80997621 caggcacgagccaccatgcctgct--attttttttttttttttttttgtatttttagtagagactgggtttcactgtgttagccaggatggtctcgatctcctgac-cttgtgatctgcccg-cctcggcctctcaaagtgctgg i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2140359 134 + 10377808 caggcacgagcca-catg-ctgct--a-----cttttttttttttttgtatttttagtagagact-ggtttcactgtgttagccaggatggtctcgatctcctgacacttgtgatctgcccgccctcggcctc-caaagtgctgg i macNem1.NW_012014910v1 C 0 I 7289 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2241722 334 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I e cerAty1.NW_012006043v1 2047179 200 - 8458610 I a score=9046.000000 s hg38.chr17_JH159148v1_alt 76353 19 + 88070 gattactgatgtgagccac s gorGor5.CYUI01015385v1 4138958 19 + 4267968 gattactgatgtgagccac i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30183759 19 - 77216781 gattacaggcgtgagccac i rheMac8.chr16 C 0 I 33 s macFas5.chr16 28094075 19 - 80997621 gattacaggcgtgagccac i macFas5.chr16 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2241722 334 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I e cerAty1.NW_012006043v1 2047179 200 - 8458610 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=1336.000000 s hg38.chr17_JH159148v1_alt 76372 9 + 88070 catactcag s gorGor5.CYUI01015385v1 4138977 9 + 4267968 cacactcag i gorGor5.CYUI01015385v1 C 0 C 0 s macFas5.chr16 28094094 9 - 80997621 tgcacccgg i macFas5.chr16 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2241722 334 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I e cerAty1.NW_012006043v1 2047179 200 - 8458610 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e rheMac8.chr16 30183778 33 - 77216781 I a score=27631.000000 s hg38.chr17_JH159148v1_alt 76381 306 + 88070 ccttgagtgagtttcttaatcctgagttctaatttcatcgcactgtgatctcagagactgtttgttatgatttccattcttttgcatttgctgaggaatgttttatttttaattatgtggtcaattttagagtaagtgctatgtggtgctgagaaaaatgtatattctgttgatttggggtggagagttctgtagatatctactaggtctgcttggcccagagctgagttcaagtcctgaatatctttgttaattttctgtcttgttgatctgtcgaatactgacagtggggtgttaaagtctctc s gorGor5.CYUI01015385v1 4138986 305 + 4267968 ccttgagtgagtttcttaatcctgaattctaatttcattgcactgtgatctcagagactgtttgttatgatttccattcttttgcatttgctgaggaatgttttatttttaattatgtggtcagttttagagtaagtgctatgtggtgctgagaaaaatgtatattctgttgatttggggtggagagttctatagatatctactaggtctgcttggcccagagctgagttcaagtcctgaatatc-ttgttaattttctgtcttgttgatctgtctaatactgacagtggggtgttaaagtctctc i gorGor5.CYUI01015385v1 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2241722 334 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I e cerAty1.NW_012006043v1 2047179 200 - 8458610 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e macFas5.chr16 28094103 0 - 80997621 C e rheMac8.chr16 30183778 33 - 77216781 I a score=2794.000000 s hg38.chr17_JH159148v1_alt 76687 30 + 88070 acta--tttttttttttaagatggagtcttgc s gorGor5.CYUI01015385v1 4139291 32 + 4267968 actatttttttttttttaagatggagtcttgc i gorGor5.CYUI01015385v1 C 0 C 0 s macFas5.chr16 28094103 20 - 80997621 ACTAtttttttttttt----------tttt-- i macFas5.chr16 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e manLeu1.NW_012106252v1 2241722 334 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e chlSab2.chr16 64979822 27 + 75148670 I e cerAty1.NW_012006043v1 2047179 200 - 8458610 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e rheMac8.chr16 30183778 33 - 77216781 I a score=4697474.000000 s hg38.chr17_JH159148v1_alt 76717 2747 + 88070 tctgtcacccaggctggagtgcagtggcacgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagactctccagtagctgggattacaggtgcgtgccaccatgctcagctcatttttgtattttttagtagagatggggtttcaccatgctcgccaggctggtcttgaactcttgacctcatgatccacccaccttggcctcccaaaacgctgggattacaggtgtgagtcaccatgcccggccagtctcccattattattgtgtgggagtctaagtctttttgtagggctctaagaacttgctttataaatccgggtgctcctgtattgggtgcatatatgcttaggttaggtttctcttcttgttgcattgattcctttaccattatgtaatgccc---tttgtcttttttgatatttgttggtttaaagtctgttttatcagaggccaggattgcaacacctgc----ttttttt-ttgttgctttccatttgcttggtaaatattcctccatcactttattttgggcctatgtgtgtcttcgcatgtgagacgggtctgatgaatacagtataccgataggtctcaattttcgcatgtgagacaggtctgatgaatacagtacaccgataggtcttaattctttatccaatttgccagtgtgcgtcttttaattggggcatttagcccatttacttttaaggttaacattgttatatgtgaatttgatcctgtctttatgatgccagctggttattttgcccattagttgatgcagtttcttcatagtgtcgatggactttaaaatttggtatgtttttgcagtggctggtaccagttttttctttccatatttagtgcttccttcaggagctcttgtaaggcaggactggtggtgacaatatccttcaccatttgcttgtctgtaaaggattttatttctcctttacttatgaagcttagtttggctggatatgagattctgggttgaaagttcttttatttaagaatgttgaatattggcccccactctcttctggcttctagggtatctgcagagagatccactattagtctgatgggcttcctggcttccctttgtgggtaacccgacctttctctttggctgcccttaaca-ttttttccttcatttcaaccttggtgaatctgacaattatgtgtcttggggttgctcttctggaggagtatctttgtggtgttctctgtatttcctaaatttgaatgttggcctgtcttgctaggttggggaagttctcctggataatatcctgaagtgtgttttctaactcggttccattctccccatcactttcaggtacaccaatcaaacataggtttggtcttttcacatagtcccatatttcttggaggctttgttcattcctttttattcttttttctctaatcttgtcttcacgctttatttcattaagttgatcttgaatctctgatatcctttcttctgcttgatccatttggtcattgatacttgtatatgcttcacaaaattctcgtgctgtgtttttcagctacatcaggtcatttatgttcttttctaaactgattattctagttagcagttcctgtaacattttataaaggttcttggcttccttgaattgggttagaacatgcacctttagctcagaggagtttgttattacccaccttctgaaacctacttctgtcaattcatcaaacttattctctgtccagatttgttcccttgctggtgaggagttgtaatcctttggaagagaagaggcattctggtttttggaattttcagccttttcttgtgctggtttttcctcatcttcttggatttatccacctttggtctttgatattggtaacctttggattgggtttttgcgtgggcatcctttttgttgatattgatgctgttgctttctgtttgttagttttccttctaacagtcaggcccctcttctgcaggtctgctggagtttgctgaaggtccactccagaccctgtttgcctgggtattgctgcctgctccttcctctggaagctttgtcccagggg-gcacctgccagatgccagccggagctctccgctatgaggtgtctgttgactcctgctgggagg--------agtcaggaggcatgtgggtcagagacccacctgaggaggcagtctgtcccttagcagagcttgagcgctgtgctgggagaacagttgatctcttcagagcccgcaggcaggaacgtttgagtctgctgctgaagctgtgcccacagctgccccaccccacaggtgctctgtcccagggagatgggagttttatctgtaagcccctgaatggggctgctgcctttctttcagagatgacctcccgagacaggaggaatatagagcggcagtctggccacagtggctttgctgtgctgaggt-ggttccgcacccagttcgaaattcccggcaactttgtttacactgtgaggggaaaactgcctactcaagctttggcagtggtgggcgcccctccccgcaccaagctcgagtgtcccaggtcgacttcagactgctgtgctgccagcgagaatttcaagccagtgaattttagcttgttgggtgccttgggggtgggatctgctgaacaagaccactcggctccctggcttcagcccctttccagggtagtgaacagttttgtgccgctggcattccaggcaccactaggatatgaaaa s gorGor5.CYUI01015385v1 4139323 2691 + 4267968 tctgtcacccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagactctccagtagctgggattacaggtgtgcgccaccatgctcagctcatttttgtattttttagtagagacagggttttaccatgctcaccaggctggttttgaactcttgacctcatgatccacccaccttggcctcccaaaacgctgggattacaggtgtgagtcaccatgcccagccagtctcccattattattttgtgggagtctaagtctttttgtagggctctaagaacttgctttataaatctgggtgctcctgtattgggtgcatatatgcttaggataggtttctcttcttgttgcattgattcctttaccattatgtaatgtcc----ttgtcttttttgatctttgttggtttaaagtctgttttatcagaggccaggattgcaacacctgc----ttttttt-ttgctgctttccatttgcttggtaaatatacctccatcactttattttgggcctatgtgtgtcttcgcatgtgagacg---------------------------------------------------ggtctgatgaatacagtacaccgataggtcttaattctttatccaatttgccagtgtgcatcttttaattggggcattta-cccatttacatttaaggttaacattgttatatgtgaatttgatcctgtctttatgatgctagctggttattttgcccattagttgatgcagtttcttcatagtgtcgatggactttaaaatttggtatgtttttgcagtggctggtaccagttttttctttccatatttagtgcttccttcaggagctcttgtaaggcaggactggtggtgacaatatccttcaccatttgcttgtctgtaaaggattttatttctcctttacttatgaagcttagtttggctggatatgagattctgggttgaaagttcttttatttaagaatgttgaatattggcctccactctcttctggcttgtagggtatctgcagagagatccactattagtctgacgggcttcctggcttccctttgtgggtaacccgacctttctc-ttggctgcccttaata--tttttccttcatttcaaccttggtgaatccgacaactatgtgtcttggggttgctcttctggaggagtatctttgcagtgttctctgtatctcctaaatttgaatgttggcccatcttgctaggttggggaagttctcctggataatatcctgaagtgtgttttctaacttggttccattctccccatcactttcaggtacaccaatcaaacataggtttggtcttttcacatagtcccatatttcttggaggctttgttcattcctttttattc-tttttctctaatcttgtcttcacgctttatttcattaagttgatcttgaatctctgatatcctttcttctgcttgatccatttggtcattggtacttgtatgtgcttcacaaaattctcgtgctgtgtttttccgctacatcaggtcatttatgttcttttctaaattgattattctagttagcagttcctgtaacattttataaaggttcttggcttccttgaattgggttagaaaatgcacctttagctcagaggagtttgttattacctaccttctgaaacctacttctgtcaattcatcaaactcattctctgtccagatttgttcccttgctggtgaggagttgtaatcctttggaagagaagaggcattctggtttttggaattttcagcctttt-ttgtgctggtttttcctcatcttcttggatttatccacgtttggtctttgatattggtaacctttggattgggtttttgcgtgggcatcctttttgttgatattgatgctgttgctttctgtttgttagttttccttctaacagtcaggcccctcttctgcaggtctgctggagtttgctgaaggtccactccagaccctgtttgcctgggtattgctgcctgctccttcctctggaagctttgtcccagggg-gcacctgccagatgccagccggagctctccactatgaggtgtctgttgactcctgctgggaga--------agtcaggaggcatgtgggtcagagacccacctgaggaggcagtctgtcccttagcagagcttgagtgctgtgctgggagaacagtggatctcttcagagcccgcaggcaggaacctttgagtctgctgctgaagctgtgcctacagctgccccaccccacaggtgctctgtcccagggagatgggagttttatctgtaagcccctgaatggggctgctgcctttctttcagagatgacctcccaagacaggaggaatatagagcggcagtctggccacagtggctttgctgtgctgaggtgggttccgcacccagttcgaacttcccggcaactttgtttacactgtgaggggaaaactgcctactcaagcttcagcaatggtgggcgcccctccccgcaccaagctcgagcgtcccaggtcgatttcagactgctttgctgccagcgagaatttcaagccagtgaattttagcttgttgggtgccttgagggtgggatctgctgaacaaggccactcggctccctggcttcagcccctttccagggtagtgaacagttttgtgccactggcattccaggcaccactaggatatgaaaa i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30183811 2680 - 77216781 tctgtcacccaggctggagtgcactggcacgatcctggcttactgcaacttccgcctcctgagttcatgccattctcctgcctcagcctctccagtagctgggattacaggtgcgcaccaccatgccaagctcgtttttgtatttttt-gtagagacagggcttcagcatgttgaccaggcaggtcttgaactcttgatctcatgatccacccaccttggcctctcaaagtgctgggattacaggtgtgagccaccttgcccagccagtctcccactattattgtgtgagagtctaagtctttttgtaggtctctaagaacttactttatgaacctgggtgctcctgtattgggtgcatatgtacttaggataggtagctcttcttgttgcattaatccctttaccattatgtaatgactttctttgtcttgtttgatctttgttggtttaaagtctgttatatcagagactaggattgcaatacctgcttttttttttttttgttgttttccatttgcttggtaaatcttcctccatcactttattttgagcctatgtgtgtctttgcacatgagatg---------------------------------------------------ggtctgctgaatatagtacactg---------tatcctttatccaatttgccagtctgtgtcttttaattggggcatttagcccatttacgtttaagattaacaatg-tatatgtgaatttgatcctgtctttatgatgctaataggttattttgcccattagttgatgcagtttctccatagtgttgatggcctttaaaatatggcatgtttttgcagtcactggtaccagtttttcctttccacatttagtgcttccttcgggaactcttgtaaggcaggactggtggtgacaaaatccttcatcatttgcttgtctgtaaaggattttatttctcctttatttatgaagcttagattggctggatatgagattctgggttgaaacttcttttatttaagaatgttgaatattgacccctactctcttctggcttgtg--gtatctgcagagagatccactgttaatctgatg--------ggcttccctttgtgggtaacccaacctttctctttggctgcccttaacatttttttccttcatttcaaccttagtgaatctgacaattatgtgtcttggggttgctcttctcgaggagtatctttatggtgttctctgtatttcctgaatttgaatgttggcctgttttactaggtttgggaagttct-ctggaaaatatcctgaagtgtgttttctaacttggttccattctccccatcactttcgggtacaccaatcaaacataggtttggtcttttcacatagtcctatatttcttggaggctttgttcattcctttttattcttttttctctaatcttgccttcacgctttatttcattaagttgatcttgaatctctgatatcctttcttctgcttgatccatttggccattgatacttgtgtatgcttcacaaaattctcgtgctatgtttttcagctccatcaggtcatttatgttctcttctaaactgattattctagttggcagttcctgtaaccttttataaaggttcttagcttccttgaattgggtttgaacatgtacctttagctcggaggagtttgttattacccaccttctgaaacctacctctgtcaattcatcaaactcattctctgtacagatttgttcccttgctggcgaggagttgtgatcctttggaggagaagaggcattctggtttttggaattttcagcctttt-ttgtgctgatttttcctcatcttcatggatttatccacctttggtctttgatattggtaaccttc-caatgggtttttgtgtgggcatcttttttgttgatgttgatgctgttgctttttgtttgctagttttccttctaacagtcaagctcctcctctgcacgtctgctggagtttgctggaactccactccagaccctgtgtgcctgggtattgctgcctgctctttcctctggaagcttcgtaccagaggagcacctgccagatgccagccagagctctcctggatgaggtgtctgttgactcctactgggaggtgtctctccgtcaggaggcatgtgggtcagagacccccctgaggaggcagtctgtcccttagcagagcctgagcactgtgctggaagagcagtggatctcttcagagctggcaggcaggaacgtttaagt---ctgctgaagctgcgcccacagctgccccttccgccaggtgctctgtcccagggagatgggagttttatctataagcccctgattgaggctgctgcctttctttcagagaatgcttgcccagagaggaggaatctagagaggcagtctggccacagtgtcttcgccgtgctgaggtgggttctgcacccagttcgaacttcccagcagctttgtttacactgagaggggaaaaccacccactcaagtttcagtaatggcagacatccctccccgcaccaggctctagtgtcccaggttggcttcagactgctgtgctggcagc--------caagccagtggatcttagcttggtgggtgccttggtggtgggatccactgagcaagaccatttggctccctggcttcagccccctttccggggagtgaatggttctgtctcactggcgttccagccaccactagggtatgaaaa i rheMac8.chr16 I 33 I 47 s macFas5.chr16 28094123 2676 - 80997621 tctgtcacccaggctggagtgcactggcacgatcctggcttactgcaacttccgcctcctgagttcatgccattctcctgcctcagcctctccagtagctgggattacaggtgcgcaccaccatgccaagctcgtttttgtatttttt-gtagagacagggcttcagcatgttgaccaggctggtcttgaactcttgatctcatgatccacccaccttggcctctcaaagtgctgggattacaggtgtgagccaccttgcccagccagtctcccactattattgtgtgagagtctaagtctttttgtaggtctctaagaacttactttatgaacctgggtgctcctgtattgggtgcatatgtacttaggataggtagctcttcttgttgcattgatccctttaccattatgtaatgactttctttgtcttgtttgatctttgttggtttaaagtctgttatatcagagactaggattgcaatacctgc----ttttttttttgttgttttccatttgcttggtaaatcttcctccatcactttattttgagcctatgtgtgtctttgcacatgagatg---------------------------------------------------ggtctgctgaatatagtacactg---------tatcctttatccaatttgccagtctgtgtcttttaattggggcatttagcccatttacatttaagattaacaatg-tatatgtgaatttgatcctgtctttatgatgctaataggttattttgcccattagttgatgcagtttctccatagtgttgatggcctttaaaatatagcatgtttttgcagtcactggtaccagtttttcctttccacatttagtgcttccttcaggaactcttgtaaggcaggactggtggtgacaaaatccttcatcatttgcttgtctgtaaaggattttatttctcctttatttatgaagcttagattggctggatatgagattctgggttgaaacttcttttatttaagaatgttgaatattgacccctactctcttctggcttgtg--gtatctgcagagagatccactgttaatctgatg--------ggcttccctttgtgggtaacccaacctttctctttggctgcccttaacatttttttccttcatttcaaccttagtgaatctgacaattatgtgtcttggggttgctcttctcgaggagtatctttatggtgttctctgtatttcctgaatttgaatgttggcctgttttactaggtttgggaagttct-ctggaaaatatcctgaagtgtgttttctaacttggttccattctccccatcactttcgggtacaccaataaaacataggtttggtcttttcacatagtcctatatttcttggaggctttgttcattcctttttattcttttttctctaatcttgccttcacgctttatttcattaagttgatcttgaatctctgatatcctttcttctgcttgatccatttggccattgatacttgtgtatgcttcacaaaattctcgtgctatgtttttcagctccatcaggtcatttatgttctcttctaaactgattattctagttggcagttcctgtaaccttttataaaggttcttagcttccttgaattgggtttgaacatgtacctttagctcggaggagtttgttattacccaccttctgaaacctacttctgtcaattcatcaaactcattctctgtacagatttgttcccttgctggcgaggagttgtgatcctttggaggagaagaggcattctggtttttggaattttcagcctttt-ttgtgctgatttttcctcatcttcatggatttatccacctttggtctttgatattggtaaccttc-caatgggtttttgtgtgggcatcttttttgttgatgttgatgctgttgctttttgtttgctagttttccttctaacagtcaagctcctcctctgcacgtctgctggagtttgctggaactccactccagaccctgtgtgcctgggtattgctgcctgctctttcctctggaagcttcgtaccagaggagcacctgccagatgccagccagagctctcctggatgaggtgtctgttgactcctactgggaggtgtctctccgtcaggaggcatgtgggtcagagacccccctgaggaggcagtctgtcccttagcagagcctgagcactgtgctggaagagcagtggatctcttcagagctggcaggcaggaacgttgaagt---ctgctgaagctgcgcccacagctgccccttccgccaggtgctctgtcccagggagatgggagttttatctataagcccctgattgaggctgctgcctttctttcagagaatccttgcccagagaggaggaatctagagaggcagtctggccacagtgtcttcgccgtgctgaggtgggttctgcacccagttcgaacttcccagcagctttgtttacactgagaggggaaaaccacccactcaagtttcagtaatggcagacatccctccctgcaccaggctctagtgtcccaggttggcttcagactgctgtgctggcagc--------caagccagtggatcttagcttggtgggtgccttggtggtgggatccactgagcaagaccatttggctccctggcctcagccccctttccggggagtgaatggttctgtctcactggcgttccagccaccactagggtatgaaaa i macFas5.chr16 C 0 I 8 s cerAty1.NW_012006043v1 2047379 2675 - 8458610 tctgtcacccaggctggagtgcactggcacgatcctggcttactgcaacttccgcctcctgagttcatgccattctcctgcctcagcctctccagtagctgggattacaggtgcgcaccaccatgccaagctcgtttttgtatttttt-gtagagacagggcttcagcatgttgaccaggctcgtcttgaactcttgatctcatgatccacccaccttggcctctcaaagtgctgggattacaggtgtgagccaccttgcccggccagtctcccactattattgtgtgagagtctaagtctttttgtaggtctctaagaacttactttatgaatctgggtgctcctgtattgggtgcatatgaacttaggataggtagctcttcttgttgcattgatccctttaccattatgtaatgactttctttgtcttgtttgatctttgttggtttaaagtctgttatatcagagactaggattgcaacacatgc----tttttttgttgttgttttccatttgcgtggtaaatcttcctccatcactttattttgagcctatgtgtgtctttgcacatgagatg---------------------------------------------------ggtctgctgaatatagtacactg---------tatcctttatccaatttgccagtctgtgtcttttaattggggcatttagcccatttacatttaagattaacaatg-tatatgtgaatttgatcctgtctttatgatgctaataggttattttgcccattagttgatgcagtttcttcatagtgttgatggcctttaaaatatggcatgtttttgcagtcactggtaccagtttttcctttccacatttagtgcttccttcaggaactcttgtaaggcaggactggtggtgacaaaatccttcatcatttgcttgtctgtaaaggattttgtttctcctttatttatgaagcttagattggctggatatgagattctgggttgaaacttcttttatttaagaatgttgaatattggcccctactctcttctggtttgta--gtatctgcagagagatccactgttagtctgatg--------ggcttccctttgtgggtaacccaacctttctctttggctgcccttaacatttttttccttcatttcaaccttagtgaatctgacaattatgtgtcttggggttgctcttctcgaggagtatctttatggtgttctctgtatttcctgaatttgaatgttggcctgttttgctaggtttgggaagttct-ctggataatatcctgaagtgtgttttctaacttggttccattctcctcatcactttcgggtacaccaatcaaacataggtttggtcttttcacatagtcctatatttcttggaggctttgttcattcctttttattcttttttctctaatcttgccttcacactttatttcattaagttgatcttgaatctctgatatcctttcttctgcttcatccatttggccattgatacttgtgtatgcttcacaaaattctcgtgctatgtttttcagcttcatcaggtcatttatgttctcttctaaactgattattctagttggcagttcctgtaaccttttataaaggttcttagcttccttgaattgggtttgaacatgtacctttagctcggaggagtttgttattacccaccttctgaaacctacttctgtcaattcatcaaactcattctctgtacagatttgttcccttgctggcgaggagttgtgatcctttggaggagaagaggcattctggtttttggaattttcagcctttt-ttgtgctggtttttcctcatcttcatggatttatccacctttggcctttgatattggtaaccttc-caatggggttttgtgtgggcatcctttttgttgatgttgatgctgttgctttttgtttgctagttttccttctaacagtcaagctcctcctctgcaggtctgctggagtttgctggaactccactccagaccctgtgtgcctgggtattgctgcctgctccttcctctggaagcttcgtcccaggggagcacctgccagatgccagccagagctctcctgtatgaggtgtctgttgactcctactgggaggtgtctctccgtcaggaggcatgtgggtcagagacccccctgaggaggcagtctgg-ccttagcagagcctgagcactgtgctggaagagcagtggatctcttcagagctggcaggcaggaatgtttaagt---ctgctgaagctgcgcccacagctgccccttcccccaggtgctctgtcccagggagatgggagtcttatctataagcccctgattgaggctgctgcctttctttcagagaatccttgcctagacaggaggaatctagagaggcagtctggccacagtgtcttcgccgtgctgaggtgggttctgcacccagttcgaactttccagcagctttgtttacactgagaggggaaaaccacccactcaagtttcagtaatggcagatatccctccctgcaccaggctctagtgtcccaggttggcttcagattgctgtgctggcagc--------caaaccagtggatcttagcttggtgggtgccttggtggtgggatccactgagcaagaccatttggctccctggcctcagccccctttccgcagagtgaatggttctgtctcactggcattccagccaccactagggtatgaaaa i cerAty1.NW_012006043v1 I 200 I 21 s chlSab2.chr16 64979849 2667 + 75148670 tctgtcacccaggctagagtgcattggcatgatcctggcttatcgtgacttccacctcctgagttcacgccattctcctgcctcagcctctccagtagctgggattacaggtgcgtactaccatgccaagctcatttttgtatttttt-gtagagacagggcttcagcatgttgaccaggctggtcttgaactcttgatctcatgatccacccaccttggcctcccaaagtgctgggattacaggtgtgagccaccttgcccggccGgtctcccactattattgtgtgagagtctaagtctttttgtaggtctctaagaacttgctttatgaatctgggtgctcctgtattgggtgcatatatacttaggataggtagctcttcttgttgcattgatctctttacctttatgtaatgaccttctttgtcttgtttgatctttgttggtttaaagtctgttttaccagagactaggattgcaacacctgc----tttttttgttgttgctttccatctgcttggtaaatcttcctccatcactttattttgagcctct-tgtgtctttgcacatgagacg---------------------------------------------------ggtctgttgaatatagtacactg---------tatcctttatccgatttaccagtctgtgccttttaattggggcatttagcccatttacatttaagattaatgttg-tatatgtgaatttgatcctgtctttatgatgctagttggttattttgcccattaattgatgcagtttcttcatagtgttgatagcctttaaaatttggcatgtttttgcagtcactggtaccagtttttcctttccacatttagtgcttccttcaggaactcttgtaaggcaggactggtggtgacaaaatccttcatcatttgcttgtctgtaaaggattttatttctcctttatttatgaagcttagtttggctggatatgagattctgggttgaaagttcttttatttaagaatattgaatattggcccccactctcttctggcttgca--gtatctgcagagagatccactgttagtctgttg--------ggcttccctttgggggtaacccaacctttctctttggctgcccttaacatttttttccttcatttcaaccttagtgaatctgacaattatgtgtcttggggttgctcttctcaaggagtatctttatggtgttctctgtatttcctgaatttgaatgttggcctgttttgctaggtttgggaagttct-ctggataatatcctgaagtgtgttttctaacttggttccattctccccatcactttcaggtacaccaatcaaacataggtttggtcttttcacatagtcctgtatttcttggaggctttgtttattcctttttattcttttttctctaatcttgccttcatgctttatttcattaagttgatcttgaatctctgatatcctttcttctgcttgatccatttggtcattgatacttgtgtatgcttcacaaaattctcatgctatgttattcagctccatca-gtcatttatgttcttttctaaactgattagtctagttagcagttcctgtaaccttttataaaggttcttagcttccttgaattgggttagaacatgtacctttagctcggagaagtttgttattatccaccttctgaaacctacttctgtcaattcatcaaactcattctctgtacagatttgttcccttgctggtgaggagttgtgatcctttggaggagaagaggcattctggtttttggaattttcagcctttg-ttgtgctggtttttcctcatcttcatggatttatcccccgttggcctttgatattggtaaccttc-cagtggggttttgtgtgggtatcctttttgttgatgttgatgctgttgctttttgtttgctagttttccttctaacagtcaagctcctcctctgcaggtctgctggagtttgctggaactccactccagaccctgtttgcctgggtattgctgcctgctccttcctctggaagattcgtaccagaggagcacctgccagatggcagccagagctctcct-------gtgtctgttgactcctactgggaggtgtctctccgtccggtggcatgtgggtcagagacccccctgaggaggcagtctgtcccttagcagagcctgagcactgtgctggaagagcagtggatctcttcggagctggcaggcaggaacgtttaagt---ctgctgaagctgcgcccacagctgccccttcccccaggtgctctgtcccagggagatgggagccttacctataagcccctgaatggggctgctgcctttctttcagagaatccctgcccagagaggaggactctagagaggcagtctggccacagtgtctttgccatgctgaggtgggttctgcacccagttcgaacttcccaggagctttgtttacactgagaggggaaaacggcccactcaagtttcagtaatggcagacgtccctccccccaccaggctcgagtgtcccaggttggcttcagactgctgcgctggcagc--------caaaccagtggatcttagcttggtgggtgccttggtggtgggatccgctgagcaagaccatttggctccctgggctcagccccctttccagggagtgaatggttctgtctcactggcgttccagccaccactagggtatgaaaa i chlSab2.chr16 I 27 I 22 s manLeu1.NW_012106252v1 2242056 2665 + 4244037 tctgtcacccaggctggagtgcattggcacgatcctggcttactgtgacttccacctcctgagttcacgccattctcctgcctcagcctctccagtagctgggattacaggtgcgtaccaccatgccaagctcatttttgtatttttt-gtagagacagggcttcagcatgttgaccaggctggtcttgaactcttgatctcatgatccacccaccttggcctcccaaagtgctgggattacaggtgtgagccaccttgcccggccGgtctcccactattattgtgtgagagtctaagtctttttgtaggtctctaagaacttgctttgtgaatctgggtgctcctgtattgggtgcatgtgtacttaggataggtagctcttcttgttgcattgatctctttaacattatgtgatgaccttctttgtcttgtttgatctttgttggtttaaagtctgttttaccagagactaggattgcaacacctgc----tttttttgttgttgctttccatttgcttggtaaatcttcctccatcactttattttgagcctat-tgtgtctttgcacatgagacg---------------------------------------------------ggtctgctgaatgtagtacactg---------tatcctttatccaatttggcagtctgtgtcttttaattggggcatttagcccatttacatttaagattaatgttg-tatatgtgaatttgatcctgtctttatgatgctagttggttattttgcccattagttgatgcagtttcttcatagtgttgatagcctttaaaatttggcatgtttttgcagtcactggtaccagtttttcctttccacatttagtgcttccttcaggaactcttgtaagtcaggactggtggtgacaaaatccttcatcatttgcttgtctgtaaaggattttatttctcctttatttatgaagcttagtttggctagatatgagattctaggttgaaagttcttttatttaagaatattgaatattggctcccactctcttctggcttgca--gtatctgcagagagatccactgttagtctgatg--------ggcttccctttgtgggtaacccaacctttctctttggctacccttaacatttttttccttcatttcaaccttagtgaatctgacagttatgtgtcttggggttgctcttctcgaggagtatctttatggtgttttctgtatttcctgaatttgaatgttggcctgttttgctaggtttgggaagttct-ctgcataatatcctgaagtgtgttttctaacttggttccattctccccatcactttcaggtacaccaatcaaacataggtttggtcttttcacatagtcctatatttcttggaggctttgtttattcctttttattcttttttctctaatcttgccttcacactttatttcattaagttgatcttgaatctctgatatcctttcttctgcttgatccatttggtcattgatacttgcgtatgcttcacaaaattctcgtgctctgtttttcagctccatcaggtcatttatgttcttttctaaacagattattctagttagcagtt-------ccttttataaaggttcttagcttcctcgaattgggttagaacatgtacctttagctcggagaagtttgttattatccaccttctgaaacctacttctgtcaattcatcaaactcattctctgtacagatttgttcccttgctggtgaggagttgtgatcctttggaggagaagaggcattctggtttttggaattttcagcctttg-ttgtgctggtttttcctcatcttcatggatttatccacctttggcctttgatattggtaacctt----ggaaggttttgtgtgggcatcctttttgttgatgttgatgctgttgctttttgtttgctagttttccttctaacagtcaagctcctcctctgcaggtctgctggagtttgctggaactccactccagaccctatgtgcctgggtattgctgcctgctccttcctctggaagcttcgtcccaggggagcacctgccagatgccagccagagctctcctgtatgaggtgtctgttgactcctactgggaggtgtctctccgtcaggaggcatgtgggtcagagacccccctgaggaggcagtccgtcccttagcagagcctgagcactgtgctggaagagcagtggatctcttcggagctggcaggcaggaacgtttaagt---ctgctgaagctgcgcccacagctgccccttccgccaggtgctctgtccccgggagatgggagttttatctataagcccctgattgaggctgctgcctttctttcagagaatccttgcccagagaggaggaatctagagaggcagtctgaccacagtgtcttcgccgtgctgaggtgggttctgcacccagttcgaacttcccagcagctttgtttacactgagaggggaaaaccacccacttaagtttcagtaatggcagacatccctccctgcaccaggctctagtgtcccaggttggcttcagactgctgtgctggcagc--------caagccagtggatcatagcttggtgggtgccttggtggtgggatccactgagcaagaccatttggctccctggcctcagccccctttctggggagtgaatggttctgtctcactggcgttccagccaccactagggtatgaaaa i manLeu1.NW_012106252v1 I 334 I 22 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=12958.000000 s hg38.chr17_JH159148v1_alt 79464 27 + 88070 caacaacaacaacaa----caaagcaaaaca s gorGor5.CYUI01015385v1 4142014 27 + 4267968 caacaacaacaacaa----caaagcaaaaca i gorGor5.CYUI01015385v1 C 0 C 0 s macFas5.chr16 28096807 27 - 80997621 GAAAAACAAAAACCA----AAAACCAAAAAA i macFas5.chr16 I 8 I 12 s cerAty1.NW_012006043v1 2050075 27 - 8458610 caaaaaccaaaaaac----caaaccaaaaca i cerAty1.NW_012006043v1 I 21 I 4 s chlSab2.chr16 64982538 26 + 75148670 aaaaaacaaaaaaac----cgaaacaaaaC- i chlSab2.chr16 I 22 C 0 s manLeu1.NW_012106252v1 2244743 30 + 4244037 aaaaaccaaaaaaccgaaacaaaacaaaac- i manLeu1.NW_012106252v1 I 22 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e rheMac8.chr16 30186491 47 - 77216781 I a score=2122604.000000 s hg38.chr17_JH159148v1_alt 79491 1215 + 88070 aaaacacaaaactcctacagctagcttggtgtttgcccaaacagccacccagttttgtgcttgaagcccagggccgtggtg--gtaggcacccgagggaatctcctggtctgtgagttgtgaagaccatagaaaa-gcatagtagctggaccagatagcaccatccccagaaataccatttgattcagcaatccctttactggatatatacccaaaggaatagaaatcattctatcataaagatacatgcatgcatatgttcactgcagcactactcacaatagcaaagacatggaaccaacccaaatgcccatcaagagtagactggataaagaaaatatgatacatgtacacaatggaatactatgcagccataaaaaggaactggatcatgtcctttgtagggacatggatggagctagaagctgttattctcagcaaactaacacaggaacagaaaaccaaaatgacatgttttcatttataagtgggagctgaatgatgggaacacatggacaaacgttggggtgggagaacaacacatactggggcctgttgcaggcaatgagagggagggcatcaggaagaacagttaatgggttctgggcttaatacttgggtgatgggttgatctgtgtagcaaaccaccatggca--catttacctatgtaacaaacctgcacatcctgcacacgtatcccagaacttaaaataaaagttgataaaataaaaaATAAATAATTTA-Aaaaattttttaaaatttctggagacagatgatggttgtctaacaacatgagtgtacttacttccactgaactgtatatgtaaaaatgattataattgtggttgggcacggtggctcacacctgtaatcccaacactttgagaggctgaggcaggtggatcacgaggtaaggtatttgagaccaatctggccaacatagtgaaaccccatctctactaaaactacaaaaaattaaccaggcatggtggcacatgcctgtagtcccagctactcgggaggctgaggcaggaggatcgctcgaacctggaaggcggaggttgcagtgagctgagaacgtgccactgcactccagcctgggtgacagagcaaaattccatctcaaaaataa--------ataaataaataaagattataattgtaaattttatgtgtattttaccacaataaaaaaaCAGTAAGCCAGGAATAAAAAGTTTTGATG s gorGor5.CYUI01015385v1 4142041 1225 + 4267968 aaaacacaaaactcctacagctagcttggtgtttgcccaaacagccacccagttttgtgcttgaagcccagggccgtggtggtgtaggaacctgagggaatctcctggtctgtgagttgtgaagactatagaaaa-gcatagtatctggaccagatagcaccatccccagaaataccatttgattcagaaatccctttactgggtatatacccaaagaaatagaaatcattctattataaagatacatgcatgcatatgttcactgcagcactactcacaatagcaaagacatggaaccaacccaaatgcccatcaagagtagactggataaagaaaatatgatacatgtacacaatggaatactatgcagccataaaaaggaactggatcatgtcctttgtagggacatggatggagctagaagctgttattctcagcaaactaacacaggaacagaaaaccaaaatgacatgttttcatttataagtgggagctgaataatgggaacacatggacaaatgttggggtgggagaacaacacacactggggcctgttgcaggcaatgagagggagggcatcaggaagaacagctaatggattctgggctcaatacttgggtgatgggttgatctgtgcagcaaaccaccatggca--catttacctatgtaacaaacctgcacatcctgcacatgtatcccagaacttaaaataaaagttgataaaataaaaaATAAATAATTTA-AAAATTTTTTTaaaatttctggagacagatgatggttgtctaacaacatgaatgtacttacttccactgaactgtatatgtaaaaatgattataattgtggttgggcacggtggctcacacctgtaatcccaacactttgagaggctgaggcaggtggatcatgacgtaaggtatttgagaccagtctggccaacatagtgaaaccccgtctctactaaaactacaaaaaattaaccaggcatggtggcacttgcctgtagtcccagctactcaggaggctgaggcaggagaatcgctcaaacctggaaggcagaggttgcagtgagctgagaacgtgccagtgcactccagcctgggtgacagagcaaaattccgtctcaaaaataagtaaatacataaataaataaaGATTATAATTGTAAATTTTATGTGTATTTTACCACAATAAAAAAACAGTAAGCCAGGAATAAAAAGTTTTGATG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30186538 1204 - 77216781 aaaacaaaaacctcctgcagctagctcagtgtttgcccaaacagctgcccagttttgtgcttgaagcccagggccctggtggtgtaggcacctgagggaatctcctcgtctatgagttgtgaagaccataggaaa-----agtatctgggcccgatagcaccatccccagaaataccatttgatccagcaatcccattactgagtatatacccaaaggaatagaaatcattctattacaaagatacatgcatgtgtatgttcactgcagcactattcacaatagcaaagacatggaaccaacccaaatgcccatcaagagtagactggataaagaaaatgtgatacatatacaccatggaatactttgcagccataaaaaggaactagatcatgtcctttgtaggaacatggatggagctagaagccgttattctcagcaaactaacacaggaacagaaaaccaaaacgacatgttctcatttataagtgggagctgaatgacgggaacacatgcacacatggtggagcaggagaacaacacatactggggcctgtcacaggcaatgggagggagagcatcaggaagaacagttaatgggtcctgggcttaaaacctgggtgataggttgatctgtgcagcaaaccaccatggcactcatttacctatgtaacaaacctgcacatcctgcacatgtatcccagaacttaaaataaaagttgataaaataaaaaATAAATAATttt-aaaaattta-aaaaatgtctggagatggatgatagttgcctaacaacatgaatgtatttactgccactaaactgtgtatgtaaaaatgattgtaactgtggctgggcacggtggctcatacctgtaatcctagtactttgggatgccaaggcaggtggattatgaggtcaggcgtttgagaccagcctggccaacatagtgaaatcccatctccactaaatatacaaaaaattagctggtcatggtggtatacgcct---gtcccagctactcgggaggctgaggtaggagaattgcttgaatctggaaggcggaggttgcagtgagccgagaacgtgccactatactccagccttggctggagagcaagactccatct------aaa--------aaaaaaaaaaaaagattataattgtaaattttatgtgtattttactgcagt-aaaaaaCAGTAAGCCACGAATAAAAAGTTTTGACG i rheMac8.chr16 I 47 C 0 s macFas5.chr16 28096846 1202 - 80997621 aaaacaaaaacctcctgcagctagctcagtgtttgcccaaacagctgcccagttttgtgcttgaagcccagggccctggtggtgtaggcacctgagggaatctcctggtctatgagttgtgaagaccataggaaa-----agtatctgggcccgatagcaccatccccagaaataccatttgatccagcaatcccattactgagtatatacccaaaggaatagaaatcattctattacaaagatacatgcatgtgtatgttcactgcagcactattcacaatagcaaagacatggaaccaacccaaatgcccatcaagagtagactggataaagaaaatgtgatacatatacaccatggaatactttgcagccataaaaaggaactagatcatgtcctttgtaggaacatggatggagctagaagccgttattctcagcaaactaacacaggaacagaaaaccaaaacgacatgttctcatttataagtgggagctgaatgacaggaacacatgcacacatggtggagcaggagaacaacacgtactggggcctgtcacaggcaatgggagggagagcatcaggaagaacagttaatgggtcctgggcttaaaacctgggtgataggttgatctgtgcagcaaaccaccatggcactcatttacctatgtaacaaacctgcacatcctgcacatgtatcccagaacttaaaataaaagttgataaaataaaaaATAAATAATttt-aaaaattta-aaaaatgtctggagatggatgatagttgcctaacaacatgaatgtatttactgccactaaactgtgtatgtaaaaatgattgtaactgtggctgggcacggtggctcatacctgtaatcctagtactttgggatgccaaggcaggtggattatgaggtcaggcgtttgagaccagcctggccaacatagtgaaatcccatctccactaaatatacaaaaaattagctgggcatggtggtatacgcct---gtcccagctactcgggaggctgaggtaggagaattgcttgaatctggaaggcggaggttgcagtgagccgagaacgtgccactacactccagccttggcgacagagcaagactccatct--------a--------aaaaaaaaaaaaagattataattgtacattttatgtgtattttactgcagt-aaaaaaCAGTAAGCCACGAATAAAAAGTTTTGACG i macFas5.chr16 I 12 C 0 s cerAty1.NW_012006043v1 2050106 1207 - 8458610 aaaacaaaaacctcctgcagctagctcagtgtttgcccaaacagctgcccagttttgtgcttgaagcccagggccctggtggtgtaggcacctgagggaacctcctggtctatgagttgtgaagaccataggaaa-----agcatctgggcctgatagcaccatccccagaaataccatttgatccagcaatcccattactgagtatatacccaaaggaatagaaatcattctattacaaagatacatgcatgtatatgttcactgcagcactattcacaatagcaaagacatggaaccaacccaaatgcccaccaagagtagactggataaagaaaatgtgagacatatacaccatggaatactttgcagccataaaaaggaactagatcatgtcctttgtaggaacatggatggagctagaagccgttattctcagcaaactaacacaggaacagaaaaccaaaacgacatgttctcatttataagtgggagctgaatgacgggaacacatgcacacatggtggagcaggagaacaacacatactggggcctgtcacaggcaatgggagggagagcatcaggaagaacagttaatgggtcctgggcttaaaacctgggtgataggttgatctgtgcagcaaaccaccatggcactcatttacctatgtaacaaacctgcacatcctgcacatgtatcccagaatttaaaataaaagttgataaaataaaaaATAAATAATTGTAAAAAATTta-aaaaatgtctggagatggatgatagttgcctaacaacatgaatgtatttactgccactaagctgtgtatgtaaaaatgattgtaactgtggctgggcacggtggctcatacctgtaatcctagtactttgggatgccaaggcaggtggattatgaggtcaggcgtttgagaccagcctggccaacatagtgaaatcccatctccactaaatatacaaaaaattagctgggcatggtggtatacgcct---gtcccagctactcgggaggctgaggcaggagaattgcttgaacctggaaggcggaggttgcagtgaaccgagaacgtgccactacactccagccttggtgacacagcaagactccatct----caaaa--------aaaaaaaaaaaaagattataattgtaaattttatgtgtattttactgcagt-aaaaaaTAGTAAGCCACAAATAAAAAGTTTTGACA i cerAty1.NW_012006043v1 I 4 C 0 s chlSab2.chr16 64982564 1206 + 75148670 aaaacaaaaacctccttcagctagctcagtgtttgcccaaacagttgcccagttttgtgcttgaagcccagggccccggtggtgtaggcacctgagggaatctcctggtctatgagttgtgaagaccataggaaaagtgtagtatctgggcccaatagcaccatccccagaaataccatttgatccagcaatcccattactgagtatatacccaaaggaatagaaatcattctgttacaaagatacatgcacgtgtatgttcactgcaacactattcacaatagcaaagacatggaaccaacccaaatgcccatcaagagtagactggataaagaaaatgtgatacatatacaccatggaatactatgcagccacaaaaaggaactagatcatgtcctttgtaggaacatggatggagctagaagccgttattctcagcaaactaacacaggaacagaaaatcaaaacgacatgttctcatttataagtgggagctgaatgatgggaacacatgcacacgtggtggggcaggagaacaacacatactggggcctgtcgcaggcaatgggaaggacagcatcagaaagaacagctaatgggtcctgggcttaaaacctgggtgattggttgatctgtgcagcaaaccaccatggcactcatttacctatgtaaaaaacctgcacatcctgcacatgtatcccagaacttaaaataaaagttgataaaagaaaaaATAAATAATTAA-AAAAATTTT-aaaaatgtctggagatggatgatagttgcctaacaacatgaatgtatttactgccactaaactgtgtatgtaaaaatgattgtaactgtggctgggtgcggtggctcatacctgtaatcctagtactttgggatgccaaggcaggtggattatgaggtcaggcgtttgagaccagcctggccaacatagtgaaatcccatctccactaaatatacaaaaaattagctgagcatggtggtatacgcct---gtcccagctactcgggaggctgaggtaggagaattgcttgaacctggaaggcggaggttgcagtgagccgagaacgtgccactacactccagccttggcgacagagcaagactccatct-----------------aaaaaaaaaaaaaaattataattgtaaattttatgtgtattttactgcagt-aaaaaaCAGTAAGCCACGAATAAAAAGTTTTGACG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2244773 1211 + 4244037 aaaacaaaaacctcctgcagctagctcagtgtttgcccaaacagctgcccagttttgtgcttgaagcccagggccctggtggtgtaggcacctgagggaatctcctggtctatgagttgtgaagaccataggaaa-----agtatctgggcccgatagcaccatccccagaaataccatttgatccagcaagcccattactgagtatatacccaaaggaatagaaatcattctattacaaagatacatgcatgtgtatgttcactgcaacactattcacaatagcaaagacatggaaccaacccaaatgcccatcaggagtagactggataaagaaaatgtgatacatatacaccatggaatactttgcagccataaaaaggaactagatcatgtcctttgtaggaacatggatggagctagaagccgttattctcagcaaactaacacaggaacaggaaaccaaaacgacatgttctcatttataagtgggagctgaatgacgggaacacatgcacacatggtggagcaggagaacaacacatactggggcctgtcacaggcaatgggagggagagcatcaggaagaacagttaatgggtcctgggcttcaaacctgggtgataggttgatctgtgcagcaaaccaccatggcactcatttacctatgtaacaaacctgcacatcctgcacatgtatcccagaacttaaaataaaagttgataaaataaaaaATAAATAATTGT-AAAAATTTtaaaaaatgtctggagatggaagatagttgcctaacaacatgaatgtatttactgccactaaactgtgtatgtaaaaatgattgtaactgtggctgggcacggtggctcatacctgtaatcctagtactttgggatgccaaggcaggtggattatgaggtcaggcgtttgagaccagcctggccaacatagtgaaatcccatctccactaaatatacaaaaaattagctgggcatggtggtacacgcct---gtcccagctactcgggaggctgaggcaggagaattgcttgaacctggaaggcggaggttgcagtgaaccgagaacgtgccactacactccagccttggtgacacagcaagactccatctcaaaaaaaa--------aaaaaaaaaaaaagattataattgtaaattttatgtgtattttactgcagt-aaaaaaTAGTAAGCCACAAATAAAAAGTTTTGACA i manLeu1.NW_012106252v1 C 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=7231.000000 s hg38.chr17_JH159148v1_alt 80706 3 + 88070 TGA s gorGor5.CYUI01015385v1 4143266 3 + 4267968 TGG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30187742 3 - 77216781 TGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28098048 3 - 80997621 TGG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2051313 3 - 8458610 TGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64983770 3 + 75148670 TGG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2245984 3 + 4244037 TGG i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 2470 3 + 37134 TGG i calJac3.chr5_ACFV01176693_random N 0 C 0 e aotNan1.NW_018505111v1 17901 4966 - 94492 I e cebCap1.NW_016107543v1 24051 5287 - 4077172 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=669610.000000 s hg38.chr17_JH159148v1_alt 80709 172 + 88070 AAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAATGTGGCCTAAGTTTTTTGGGCCATGACTTAATCTTCTATTACCATTTATTTAGGTGACCAGAAGAATGAGGACAAACAGAATGCCAATTCCATTATTTCAACAAACAAGTATTTCTAGATGAGCCTCTCACACCA s gorGor5.CYUI01015385v1 4143269 172 + 4267968 AAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAATGTGGCCTAAGTTTTATGGGGCATGACTTAATCTTCTATTACCATTTATTTAGGTGACCAGAAGAATGAGGACAAACAGAATGCCAATTCCATTATTTCAACAAACAAGTATTTCTAGATGAGCCTCTCACACCA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30187745 172 - 77216781 GAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGAGTGACTTAATCTCCTATTACCATTTATTTAGGTGACCAGAAGAAGGAGGACATACAGAACGCCAATTCCATGACTTCAACAAACAAGTATTTCTAGATGAGCCTCTCACACCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28098051 172 - 80997621 GAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGAGTGACTTAATCTCCTATTACCATTTATTTAGGTGACCAGAAGAAGGAGGACATACAGAACGCCAATTCCATGACTTCAACAAACAAGTATTTCTAGATGAGCCTCTCACACCA i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2051316 172 - 8458610 GAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGAGTGACTTAATCTCCTATTACCATTTATTTAGGTGACCAGAAGAAGGAGGACATACAGAACGCCAATTCCCTGACTTCAACAAACAAGTATTTCTAGATGAGCCTCTCACACCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64983773 172 + 75148670 GAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGAGTGACTTAATCTCCTATTACCATTTATTTAGGTGACCAGAAGAATGAGGACATACAGAACGCCAATTCCATGACTTCAACAAACAAGTATTTCTAGATGAGCCTCTCACACCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2245987 172 + 4244037 GAACAAATTATCTCTCAAAGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGAGTGACTTAATCTCCTATTACCATTTATTTAGGTGACCAGAAGAAGGAGGACATACAGAACGCCAATTCCCTGACTTCAACAAACACGTATTTCTAGATGAGCCTCTCACACCA i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 2473 172 + 37134 AAACAAATTATCTCTCAATGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGCATGACTTAATCTCCTATTACCATTTATTTAGGTGACCAGAAGAATGAGGACATACAGAATGCCAATTCCATGACTTCAACAAACAGATATTTCTAGATGAGCCTCTCAAACCA i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 29338 172 - 4077172 AAACAAATTATCTCTCAATGTTTGGGTGCAAATGAAGTGTGGCCTAAATTTTATGGGGCATGACTTAATCTCCTGTTACCATTTATGTGGGTGACCAGAAGAATGAGGACATACAGAATGCCAATTCCATGACTTCAACAAACATATATTTCCAGATGAGCCTCTCACACCA i cebCap1.NW_016107543v1 I 5287 C 0 s aotNan1.NW_018505111v1 22867 172 - 94492 AAACAAATTATCTCTCAACGTTTGGGTGCAAATGAAGTGTGGCCTAAGTTTTATGGGGCATGACTTAATCTCCTGTTACCATTTATTTAGGTGACCAGAAGAATGAGGACATACAGAATGCCAATTCCATGACTTCAACAAACAGATATTTCTAGATGAGCCTCTCACACCA i aotNan1.NW_018505111v1 I 4966 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=471780.000000 s hg38.chr17_JH159148v1_alt 80881 157 + 88070 AAGTcccaggacagaggcaggaacacaatgggtgctcaaaaatatttAAAGAACTTCACCAGTGCCTGACAAGAGACTGAGAATATAAAATGTTCACATGATTCACGAGGGCTCTTAAAACGAGTTGTTGCTCTTAAGATGTGGCTATTGGTTAGGG s gorGor5.CYUI01015385v1 4143441 157 + 4267968 AAGTcccaggacagaggcaggaacacaatgggtgctcaaaaatatttAAAGAACTTCACCAGTGTCTGACAACAGACTGAGAACATAAAATGTTCACATGATTCACGAGGGCTCTTAAAACAAGTTGTTGCTCTTAAGATGTGGCTATTGGTTAGAG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30187917 157 - 77216781 AAGTcccaggacagaggcaggaacacaatgggtgctcaaaaatatttAAAGACGTTCACCAGCGGCTGACAAGAGACTGAGAAAATAAAATGTTCACGTGATTCAGGAGGGCTCTTAAAACAAATTGTTGCTCTTAAGATGTGGCTATTGGTTAGGG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28098223 157 - 80997621 AAGTcccaggacagaggcaggaacacaatgggtgctcaaaaatatttAAAGACGTTCACCAGCGGCTGACAAGAGACTGAGAAAATAAAATGTTCACGTGATTCAGGAGGGCTCTTAAAACAAATTGTTGCTCTTAAGATGTGGCTATTGGTTAGGG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2051488 157 - 8458610 AAGTcccaggacagaggcaggaacacaatgggtgctcaaaaatatttAAAGACGTTCACCAGCGGCTGACAAGAGACTGAGAAAATAAAATGTTCACGTGATTCAGGAGGGCTCTTAAAACAAATTGTTGCTCTTAAGATGTGGCTATTGGTTAGGG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64983945 157 + 75148670 AAGTcccaggacagaggcaggaacacaataggtgctcaaaaatatttAAAGATGTTCACCAGCAGCTGACAAGAGACTGAGAAAGTAAAATGTTCACGTGGTTCAGGAGGGCTCTTAAAACAAATTGTTGCTCTTAAGATGTGGCTATTGGTTAGAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2246159 157 + 4244037 AAGTCCCAGGACAGAGGCAGGAGCACAATGGGTGCTCAAAAATATTTAAAGACGTTCACCAGCGGCTGACAAGAGACTGAGAAAATAAAATGTTCACGTGATTCACGAGGGCTCTTAAAACAAATTGTTGCTCTTAAGATGTGGCTGTTGGTTAGGG i manLeu1.NW_012106252v1 C 0 C 0 s cebCap1.NW_016107543v1 29510 157 - 4077172 AAGTCCTAGGAGAGAGGCAGGAACAGAATGGGTGCTCAAAAATATTTAAAGAAGTTCACCAGCAGCTGAGCAGAGACTGAGAAAATAAAATGTTCACATGATTCACAAGGGCTCTGAAAACAAGTTGTTGATCTTAAGATGTGACTATTTGTTAGGG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 23039 157 - 94492 AAGTCCTAGGACAGAGGCAGGAACAGAATGGGTGCTCAAAAATATTTAAAGAAGTTCACCAGCGGCTGAGCAGAGACTGAGAAAATAAAATGTTTACATGATCCACAAGGGCTCTGAAAACAAGTTGTTAATCTTAAGATGTGACTATTGGTTAGGG i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e calJac3.chr5_ACFV01176693_random 2645 0 + 37134 C e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=414735.000000 s hg38.chr17_JH159148v1_alt 81038 122 + 88070 GAATGAATTTGGAAAGAACTTTGTTAGTAGAAAATGGTCTGCAAATGCGTGGAATTGGTGTTTCCATTGTCAGAGAACAACTTCGAGTGCACCCCTTCCCGGTTCTAAGTCCTTAGTATAAT---------------- s gorGor5.CYUI01015385v1 4143598 122 + 4267968 GAATGAATTTGGGAAGAACTTTGTTAGTAGAAAATGATCTGCAAATGCGTGGAATTGGTGTTTCCATTGTCGGAGAACAACTTCGAGTGCACCCCTTCCCGGTTCTAAGTACTTAGTATAAT---------------- i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30188074 122 - 77216781 GAATGAATTTGGGATGAACTTTGTTACTAGAAAATGATCTGCCAGTGCATGGAATTGGTGTTTCCATTGTCGGAGAACAACTTCAAGTGCACCTCTTCCCCGTGCTAAGTTCTTAGTATAAt---------------- i rheMac8.chr16 C 0 I 335 s macFas5.chr16 28098380 122 - 80997621 GAATGAATTTGGGATGAACTTTGTTACTAGAAAATGATCTGCCAGTGCATGGAATTGGTGTTTCCATTGTCGGAGAACAACTTCAAGTGCACCTCTTCCCCGTGCTAAGTCCTTAGTATAAt---------------- i macFas5.chr16 C 0 I 316 s cerAty1.NW_012006043v1 2051645 122 - 8458610 GAATGAATTTGGGATGAACTTTGTTACTAGAAAATGATCTGCCAGTGCATGGAATTGGTGTTTCCATTGTCGGAGAACAACTTCAAGTGCACCTCTTCCCGGTGCTAAGTCCTTAGTATAAt---------------- i cerAty1.NW_012006043v1 C 0 I 314 s chlSab2.chr16 64984102 122 + 75148670 GAATGAATTTGGGATGAACTTTGTTACTAGAAAATGATCTGCCAGTGCATGGAATTGGTGTTTCCATTGTCGGAGAATAACTTCAAGTGCACCTCTTCCCGGTGCTAAGTCCTTAGTATAAt---------------- i chlSab2.chr16 C 0 I 325 s manLeu1.NW_012106252v1 2246316 122 + 4244037 GAATGAATTTGGGATGAACTTTGTTACTAGAAAATGATCTGCCAGTGTATGGAATTGGTGTTTCCATTGTCGGAGAATAACTTCAAGTGCACCTCTTCCCGGTGCTAAGTCCTTAGTATAAt---------------- i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 2645 138 + 37134 GAATGAATTTGGGAAGAGCTTTGTTAGTAGAAAACGATCTGCAAATGCATGGAATTGGTGTGTCTATTGTCAGAGAACAACGTAAACCACACCTATTCCTGGTGCTAAGTCCTTAGCATAAATTCTTCTTTATAGTAA i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 29667 138 - 4077172 GAATAAATTTGGGAAGAGCTTTGTTAGTAGAAAATGGTCTGCAAATGCATGGAATTGGTGTGTCTACTGTCAGAGAACAACGTAAACCACACCTCTTCCTGGTGCTAAGTCCTTAGTATAAATTCTTCTTTATAGTCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 23196 138 - 94492 GAATGAATTTGGGAAGAGCTTTGTTAGTAGAAAATGATCTGCGAATGCATGGAATTGGTGTGTCTACTGTCAGAGAACGACGTAAGCCGCACCTCTTCCCGGTGCTAAGTCCTTAGTACAAATTCTTCTTTATAGTAA i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=4095.000000 s hg38.chr17_JH159148v1_alt 81160 1 + 88070 T s gorGor5.CYUI01015385v1 4143720 1 + 4267968 T i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30188531 1 - 77216781 t i rheMac8.chr16 I 335 C 0 s macFas5.chr16 28098818 1 - 80997621 T i macFas5.chr16 I 316 C 0 s cerAty1.NW_012006043v1 2052081 1 - 8458610 T i cerAty1.NW_012006043v1 I 314 C 0 s chlSab2.chr16 64984549 1 + 75148670 T i chlSab2.chr16 I 325 C 0 s manLeu1.NW_012106252v1 2246438 1 + 4244037 t i manLeu1.NW_012106252v1 C 0 I 884 s calJac3.chr5_ACFV01176693_random 2783 1 + 37134 T i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 29805 1 - 4077172 T i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 23334 1 - 94492 T i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=811594.000000 s hg38.chr17_JH159148v1_alt 81161 307 + 88070 CTGTAAATGTGACATCAGTAGAGGTgaaatcagaaaccctgagcctagagccaattctgtccatccttagctacatgacacgatgcaggccactttactcatcttggTTCTGTCCAAGTTTGAGGCTTCTATGTGACTTAGATGAGATAATATATGTGAGATGcaaaacaatcactgaaacaaaacaaaacacaacaCAGGAGGCACTATAGTAAACGCTTTATTAGGAAATAAATAAAGCAATGCTCCTTTCTGCTAAGAAGATAATACAGAGTTGTCATGGAA-AGTCACAAAAGTGAGTATTAAT s gorGor5.CYUI01015385v1 4143721 307 + 4267968 CTGTAAATGTGACAGCAGTAGAGGTGAAATCAGAAACCCTGAGCCTAAAGCCAATTGTGTCCATCCTTAGCTACATGACACGATGCAGTCCACTTTACTCATCTTGGTTCTGTCCAAGTTTGAGGCTTCTATGTGATTTAGATGAGATAATATATGTGAGATGcaaaacaatcactgaaacgaaacaaaacacaacaCAGGAGGCACTATAGTAAACACTTTATGAGAAAATAAATAAAGCAACGCTCCTTTCAGCTAAGAAGATAATACAGAGTTGTCATGGAA-AGTCACAAAAGTGAGTATTAAT i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30188532 302 - 77216781 ctataaatGTGACAGCAGCAGAGCTGAAATCAGAAACCAAGAGCTTAGAGCCGATTCTGTCCATCATTAGCTACATGACACGATGCAGGCCACTTTGCTCATCTTGGTTCTGTCCATGTTTGAGGCTATTATGTTAGTTAGATGAGATAATATATGTGAGATGCAAAGCAATCATAGACACAAAACAAAACACAATACAGGAGGCACTATAGTAAATACTTTATTAGGAAATAAAT-----AACCCTCCTTGCAGCTAGGAAGATAATACAGAGTCGTCATGGGA-AGTCACAAAAATGAGTATTATG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28098819 302 - 80997621 CTATAAATGTGACAGCAGCAGAGCTGAAATCAGAAACCCTGAGCCTAGAGCCGATTCTGTCCATCCTTAGCTACATGACACGATGCAGGCCACTTTGCTCATCTTGGTTCTGTCCATGTTTGAGGCTACTATGTTACTTAGATGAGATAATATATGTGAGATGCAAAGCAATCATAGACACAAAACAAAACACAATACAGGAGGCACTATAGTAAAGACTTTATTAGGAAATAAAT-----AACCCTCCTTGCAGCTAGGAAGATAATACAGAGTCGTCATGGGA-AGTCACAAAAATGAGTATTATG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052082 306 - 8458610 CTGTAAATGTGACAGCAGCAGAGCTGAAATCAGAAACCCTGAGCCTAGAGCCGATTCTGTCCATCCTTAGCTACATGACACGATGCAGGCCACTTTGCTCATCTTGGTTCTGTCCATGTTTGAGGCTACTATGTTACTTAGATGAGATAATATATGTGAGATGGAAAGCAATCATAGACACAAAACAAAACACAATACAGGAGGCACTATAGTAAAGACTTTATTAGGAAATAAAT-AAACAACCCTCCTTGCAGCTAGGAAGATAATACAGAGTCGTCATGGGA-AGTCACAAAAATGAGTATTATG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64984550 306 + 75148670 CTGTAAATGTGACAGCAGCAGAGCTGAAATCAGAAACCCTGAGCCTAGAGCCGATTCTGTCCATCCTTAGCTACATGACACGATGCAGGCCACTTTGCTCATCTTGGTTCTGTCCAAGTTTGAGGCCACTATGTTACTTAGATGAGATAACATATGTGAGATGCAAAGCAATCATAGACACAAAACAAAACACAATACAGGAGGCACTATAGTAAAGACTGTATTAGGAAATAAAT-AAGCAACCCTCCTTGCAGCTAGGAAGATAATACAGAGTTGTCATGGAA-AGTCACAAAAATGAGTATTATG i chlSab2.chr16 C 0 C 0 s calJac3.chr5_ACFV01176693_random 2784 298 + 37134 TTGTGAATTTGACagcgccacagctgaaatcagaaatcctgggcctagacccgattctgtctgtccttagctacgtgacatgatgcaggtcattttactcatcttgacTCTGTCCAAGTTTGAGGCTGTCATGTGACTTAGATGAGATAGTGTATGTGAGTTGCAAAACAATCATAGAAACAACACAAAACATAGTACAGGGGGCACTGTAGTAAAGACTTTACTAGGACAT-----AAGCAATGCTCCTTTCAGCTAGGAGAATAC-----GGTTGTCATGGAAGAGTCACAAAAATTCATATTATA i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 29806 307 - 4077172 CTGTAAATGTGACAACACCACAGCTgaaatcagaaaccctgggcctagacccgattctgtctgtccttagctacatggcatgacgcaggtcactttactcaccttggttctGTCCAAGTTTGAGGCTGTCATGTGACTTAGATTAGATAATGTATGTGAGATGCAAAACAATCATGGAAACAATACAAAACATAATACAGGAGACATGATAGTAAAGGCTTTATTAGGAAATAAAC-AAGCAATGCTCCTTTCAGCTAGGAAGATAATACAGAGTTGTCATAGAAGAGTCACAAAAATTTGTATTATA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 23335 304 - 94492 CTGTAAATGTGACAGCACCACAGCTGCaatcagaaaccccgggcctagacccgattctgtccatccttagctacatggcatgacgcaggtcactttactcatcttggttctgtccaagtttgaggctgtcatgtgacttagatgagataATGTATGTGAGATGCAAAACAATCATAGAAACAATACAAAGCATAATACAGGAGGCACGA---TAAAGGCTTTATTAGGAAATAAAC-AAGCAATGCTCCTTTCAGCTAGGAAGATAATACAGAGTTGTCATGGAAGAGTCACAGAAATTTGTATTATA i aotNan1.NW_018505111v1 C 0 C 0 e manLeu1.NW_012106252v1 2246439 884 + 4244037 I e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=357407.000000 s hg38.chr17_JH159148v1_alt 81468 94 + 88070 TTGAAACAAAATGATATTTATCATTGTAAAGATCTAATAAGggccgggtgtggtggctcatggctgtaatcccaacactttgggaggccgaggt s gorGor5.CYUI01015385v1 4144028 94 + 4267968 TTGAAACAAAATGATATTTATCATTGTAAAGATCTAATAAGggccaggtgtggtggctcatggctgtaatcccaacactttgggaggccaaggt i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30188834 94 - 77216781 TTGAAACAAAATGATATTTATCATTGTAAAGATCTAATAAGggccgggtgtggtggctcatggctgtaatcccagcactttgggaggctgaggt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099121 94 - 80997621 TTGAAACAAAATGATATTTATCATTGTAAAGATCTAATAAGggccgggtgtggtggctcatggctgtaatcccagcactttgggaggctgaggt i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052388 94 - 8458610 TTGAAACAAAATGATATTTATCATTGTAAAGATCTAATAAAggctgggtgtggtggctcatggctgtaatcccagcactttgggaggccgaggt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64984856 91 + 75148670 TTGAAACACA---ATATTTATCATTTTAAAGATCTAATAAGggccgggtgtggtggctcatggctgtaatcccagcactttgggaggccgaggt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2247323 94 + 4244037 TTGAAACAAAATGATATTTATCATTTTAAAGATCTAATAAGggcggggtgtggtggctcatggctgtaatcccagcactttgggaggccgaggt i manLeu1.NW_012106252v1 I 884 C 0 s calJac3.chr5_ACFV01176693_random 3082 94 + 37134 TTGAAATAAAATGATATTTATCATTGTAAAGATCTAATAAGggctgggtgtggtggcttatgcctataatcccagcactttgggaggccaaggt i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 30113 92 - 4077172 TTGAAACAAAATG--ATTTATCATTGTAAAGATCTAATAAGggccaggtgtggtggcttatgcctataatcccagcactttgggaggccaaggt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 23639 94 - 94492 TTGAAACAAAATGATATTTATCATTGTAAAGATCTAATAAGggctgggtgtggtggcttatgcctataatcccagcactttgggaggccaaggt i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=874980.000000 s hg38.chr17_JH159148v1_alt 81562 530 + 88070 gggcagatctcctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac-aaaaaattagtcagatgtggtggcaggaacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagcacagaggtgtcagtgagctgagatcgcgccattgcactttagcctgggcaacaagagtgaaactctgtttaaaaaaa-aa--gaaaaaaaaaTT--AATAAGACAGCTATGAGAATTT--TTTTTCTTTTTAGAAATTTTCCTAGAGTAAAAAAACAAAGATAATTTTGTCAACGCTCAGATCATAAATCCAGGTCAAGAACAGATGAAGCTGACCAGCAGCTGGCTCAATGAAGAGACTATCGGAGTGAAAAAGGCTACACTCATTAAGCAAGTTCAT-AATTTGTTAACAAGAAGATGACTGACAGTTTAGTGACAGTATGTATGTTATCAGCAGAGGAAGTGGAGTGAGTTTGCCATAGAAATGGATATCTggc s gorGor5.CYUI01015385v1 4144122 530 + 4267968 gggcagatctcctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatac-aaaaaattggtcggatgtggtggcaggaacctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagcacagaggtgtcagtgagctgagatcgcgccattgcactttagcctgggcaacaagagtgaaactctgtctcaaaaaa-ag--aaaaaaaaaaTT--AATAAGACAGCTATGAGAATTT--TTTTTCTTTTTAGAAATTTTCCTAGAGTAAAAAAACAAAGATAATTTTGTCAATGCTCAGATCATAAATCCAGGTCAAGAACAAATGAATCTGACCAGCAGCTGGCTCAATGAAAAGAATATCAGAGTGAAAAAGGCTGCACTCATTAAGCAAGTTCAT-AATTTGTTAACAAGAAGATGACTGACAGTTTAGTGACAGTATGTATGTTATCAGCAGAGGAAGTGGAGTGAGTTTGCCATAGAAATGGATATCTggc i gorGor5.CYUI01015385v1 C 0 C 0 s chlSab2.chr16 64984947 538 + 75148670 gggcggatcacctgaagtcaggagttcaagaccagcctggccaacatggtgaatccctgtctctactaaaaatacaaaaaaattagtcgggtgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcatttgaacctgggagcatggaggagtcagtgagctgagatcgtgccattgcactttaacctgggcaataagagtgaaactctgtctcaaaaaa-aaagaaaaaaaaaaaTCGAATAAGACAGCTATGAGAATTTTCTTTTTCTTTTTATAAATTTTCCTAGGGTAAAAAAGCAAAGATCATTTCGTCAACGCTCAGAGCATAAATCCAGGTCAAGAACAGATGAAGCTGACCAGCAGCTGGCTCAATGAAGAGAATATTGGGGTGAAAAAGGCTACACTCATTAAGCAAGCTCATAAATCTGTTAACAAGAAGATGACTGACAGTTTAGTGACAGCATGTATGTTATCAGCAGAGGAAGTGGAGTGAGTTTGCCATAGAAATGGATATCTggc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2247417 536 + 4244037 gggtggatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaatccctgtctctactaaaaatacaaaaaaattagtcgggtgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcatttgaaactgggagcatggaggagtcagtgagctgagatcgtgccattgcactttaacctgggcaatgagagtgaaactctgtctcaaaaaa-aa--gaaaaaaaaaaTCGAATAAGACAGCTATGAGAATTTTCTTTTTCTTTTTATAAATTTTCCTAGGGTAAAAAAACAAAGATCATTTCGTCAACGCTCAGACCATAAATCCAGGTCAAGAACAGATGAAGCTGACCAGCAGCTGGCTCAAAGAAGAGAATATCAGAGTGAAAAAGGCTACACTCACTAAGCAAGCTCATAAATCTGTTAACAAGAAGATGACTGACAGTTTAGTGACAGCATGTATGTTATCAGCAGAGGAAGTGGAGTGAGGTTGCCATAGAAATGGATATCTGGC i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 3176 533 + 37134 gggcagatcacctgcgatcgagagtttgagacctgcctggccaacatggtaaaaccccatctctactaaaaatac-aaaaaattagccaggtgtggcggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggag-gcggaggttgcagtgagccaagattgtgccattgcactccaccctgggcaataagagtgaaactctgtttcaaaaagaaa--aaaaaaaGATCT--AATAAGACAGCTATGAGAGTTTTCTTTTTCTTTTTAGAAATTTTCTTAGGGTTAAAAAACAAAGATCATTTTGTCAAGGCTCAGACCATAAATCCAGGTCAAGAACAGATGAAACTGACTAGCAGCTGGCTCAGTGAAGAGAATATTGGAGTGAAAAAGATTGCATTCATTAAGCAACCTCATAAATCTGTTAACAAGAAGATGACTGACAGTTTAGTGACAGCATATATGTTATCAGCAGAGGAAGTGGAGTGGGTTTGCCATAGAAATGGATATCTGgg i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 30205 532 - 4077172 gggcggatcacctgagatcaggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaatac-aaaaaattagccaggtgtggtggcaggcaccggtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaa-gcagaggttgcagtgagctgagattgcaccattgcactccaccctaggcaataagagtgaaattccgtctcaaaaag-aa--aaaaaaaGATCT--AATAAGACAGCTATGAGAGCTTTCTTTTTTTTTTTAGAAATTTTCCTAGGGTAAAAAAACAGAGATCATTTTGTCAAGGCTCAGACCATAAATCCACATCAAGAACAGATGAAGCTGACCAGCAGCTAGGTCAATGAAGAGAATATTGGAGTGAAAAAGATTGCACTCATTAAGCAACCTCATAAATCTGTTAACAAGAAGATGACTGACAGTTTACTGACAGCATATATGTTATCAGCAGAGGAAGTGGAGTGAGTTTGCCACAGATATGGATAACTGgg i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 23733 529 - 94492 gggcggatcacctgagatccggagtttgagaccagcctggccaacatggtaaaaccccatctctactaaaaatac-aaaaaatcagccaggtatggtggcaggcaccggtaatctcagctactcaggaggctgaggcaggagaatcacttgaacctgggag-gcggaggttgcagtgagccgagattgcgccattgcactccaccctgggcaataagagtgaaattccgtttcaaaaag--a--aaaaaaaGATCT--AATAAGACAGATATGAGAGTTTTCTTTTTCTTTTTAGAAATATTCCTAGGGTAAAAAAAC--AGATCATTTTGTCAAAGCTCAGACCATAAATCCAGGTCAATAACAGATGAAGCTGACCAGCAGCTGGCTCAATGAAGAGAATATTGGAGTGAAAAAGATTGCACTCATTAAGCAACCTCATAAATCTGATAACAGGAAGATGACTGACAGTTTACTGACAGCATATATGTTATCAGCAGAGGAAGTAGAGTGAGTTTGCCACAGAAATGGATATCTGgg i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1888661 14031 + 3513951 T e cerAty1.NW_012006043v1 2052482 0 - 8458610 C e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e macFas5.chr16 28099215 0 - 80997621 C e rheMac8.chr16 30188928 0 - 77216781 C a score=98538.000000 s hg38.chr17_JH159148v1_alt 82092 51 + 88070 ctgggcgtggtggctcatgcctgtaatcccagcactttgggaggtcaaggc s gorGor5.CYUI01015385v1 4144652 51 + 4267968 ctgggcgtggtggctcatgcctgtaatcccagcactttgggaggtcaaggc i gorGor5.CYUI01015385v1 C 0 C 0 s chlSab2.chr16 64985485 51 + 75148670 ctgggcgggttggctcatgcctgtaatcccaacactttgggaggctgaggt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2247953 51 + 4244037 ccgggcgggttggctcatgcctgtaatcccaacactttgggaggctgaggt i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 3709 51 + 37134 ccctgcatggtggcttacgcctgtaatcctagcactttgggaggccaaggt i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1874630 51 + 3513951 ccgggcagggtggctcacacctctaatcccagtattttggggggttgaagt i saiBol1.JH378271 T 14031 C 0 s cebCap1.NW_016107543v1 30737 51 - 4077172 ccctgcatggtggcttacgcctgtaatcctagcactttgggaggccaaggt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24262 51 - 94492 ccctgcatggtggcttactcttgtaatcctagcactttgggaggccaaggt i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e cerAty1.NW_012006043v1 2052482 0 - 8458610 C e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e macFas5.chr16 28099215 0 - 80997621 C e rheMac8.chr16 30188928 0 - 77216781 C a score=965970.000000 s hg38.chr17_JH159148v1_alt 82143 265 + 88070 gggtggatcatctgaggtcaggtgtttgaga-ccagcctgaccaacatggagaaaccccatctctacgaaaaatac--aaaattagctgggcatgatggcgtatgcctgtaatctcagctactcgggaggctgaggcaggggaatggctggaacccaggaggtggaggttgcggtgagctaagatcatgccattgcactccagcctgggcaacaagagcgaaactgggtctcaaaaaaaa--------------------------------------------------------------aaa------------aaaaa---------------aaaaagaataaaTGG-----------ATACC s gorGor5.CYUI01015385v1 4144703 264 + 4267968 gggtggatcatctgaggtcaggtgtttgaga-ccagcctgaccaacatggagaaaccccatctctacgaaaaatac--aaaattagctgggcatgatggtgcatgcctgtaatcccagctactcgggaggctgaggcaggggaatggctggaacccaggaggtggaggttgcggtgagctaagatcatgccattgaactccagcctgggcaacaagagcgaaactaggtctc-aaaaaaa--------------------------------------------------------------aaa------------aaaaa---------------aaaaTGAATAAATGG-----------ATACC i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30188928 275 - 77216781 gagtggatcacctgaggtcaggagttcgaga-ccagcctgaccaacatggagaaaccctgtctctactagaaatac--aaaattagccgggtgtggtggtgcatgcctgtaatcccagccactcgggaggctgaggcaggagaatggcttgaacccaggaggcggacgttgcagtgagctgagatcatgccattgcactccagcctgggcaacaagagcaaaactatgtcaa-aaaaaaa--------------------------------------------------------------aaa------------aaaaa---------------aaaaaaagtaaaaGAAAGAAATGGATATATC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099215 275 - 80997621 gagtggatcacctgaggtcaggagttcgaga-ccagcctgaccaacatggagaaactccgtctctactagaaatac--aaaattagccgggtgtggtggtgcatgcctgtaatcccagccactcgggaggctgaggcaggagaatggcttgaacccaggaggcggacgttgcagtgagctgagatcatgccattgcactccagcctgggcaacaagagcaaaactatgtcaa-aaaaaaa--------------------------------------------------------------aaa------------aaaaa---------------aaaaaaagtaaaaGAAAGAAATGGATATATC i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052482 243 - 8458610 gagtggatcacctgaggtcaggagttcgagacccagcctgaccaacatggagaaaccccgtctctactagaaatac--aaaattagccgggtgtggtggtgcatgcctgtaatcccagccactcgggaggctgaggcaggagaatggcttgaacccaggaggcagaggttgcagtgagctgagatcatgccattgcactccagcctg------------------------------------------------------------------------------------------------aa------------aaaaa---------------aaaaaaagtaaaagaaagaaaTGGATATATC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985536 290 + 75148670 gggtggatcacctgaggtcaggagttcgaga-ccagcctgaccaacatggcgaaaccccatctctactagaaatac--aaaattagctgggcatggtggcgcatgcctgtaatcctagctactcgggaggctgaggcaggagaatggcttgaacccaggaggcggaggttgcagtgagctgagatcgtgccattgcattccagcctgggcaacaagagcaaaactatgtcaa-aaaaaaa--------------------------------------------------------------aaa------------aaaaaaaggaaaaggaaaGGAAAAAAAGTAAAAGAAAGAAAGGGATATATC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248004 290 + 4244037 gggtagatcacctgaggtcaggagttcgaga-ccagcctgaccaacatggagaaaccccatctctactagaaatac--aaaattagctgggcatggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatggcttgaacccaggaggcggaggttgcagtgagctgagatcgtgccattgcattccagcctgggcaacaagagcaaaactatgtcaa-aaaaaaa--------------------------------------------------------------aaa------------aaaaaaaaggaaaggaaaGAAAAAAAAGTAAAAGAAAGAAAGGGATATATC i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 3760 285 + 37134 gggtggatcacctgaggttgggagtttgaga-ccagcctgacaaatatggagaaaccctgtctctactaaaaatac--aaaattagccgggcatggtggcacatgcctataatcccagttactcaggatgctgaggcaggagaatcacttctacccaggaggtggaggttgcggtgagccgagatcatgccattgcactccagcctgggcaacaagagtgaaactccatctc-aaaaaaa--------------------------------------------------------------aaaaaaaaaagagaaaagaa---------------aagaaaaaagaaagaaaGAAATGG--ATATC i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1874681 240 + 3513951 gggtgaatcacttgagatcaggtgtttgaga-ccagcctgatcaacatggtgaaaatccatctttactaaaaatacaaaaaattagccaggcatggtggaacagacctgtcatcccagctagttgggaggttgaggcaggagaattggttgaacctgggaggcagaggttacagtgagccaaaatcaagctactgcactccagcctgggtgacaa-agtgagactctgtctc-agaaaag--------------------------------------------------------------aaa--------------------------------------------------------------- i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 30788 340 - 4077172 gggtggatcacctgaggttgggagttcgaga-ccaacctgatagatatggagaaaccctgtctctactaagaatac--aaaattagccaggcatggtgacacatgcctgtaatcccagctactcaggatgctgaggcaggagaatcacctcaacccgggaggtggaggttgcgatgaactgagatcatgccattgcactccagcctgggcaacaagagtgaaactccgtctc-aaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaa-------aaaaaaaaaa---------------aaaaaaatagaaagaaataaaTGG--ATATC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24313 262 - 94492 gggtggatcacctgaggttgggagttcgaga-ccagcctgacaaatatggagaaaccctgtctctactaaaaatac--aaaattagccgggcatggtggcacatgcctgtaatcccagctactcaggatgctgaggcaggagaatcacttcaacccgggaggtggaggttgcggtgagctgagatcatgccattgcactctagcctgggcaacaagagtgaaactccgtctc-aaaaaaa--------------------------------------------------------------aag--------------------------------------aaagaaagaaaGAGATGG--ATATC i aotNan1.NW_018505111v1 C 0 C 0 e dasNov3.JH570468 636635 11792 - 852752 T e otoGar3.GL873537 22864121 50595 + 28711273 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=17945.000000 s hg38.chr17_JH159148v1_alt 82408 4 + 88070 TGGC s gorGor5.CYUI01015385v1 4144967 4 + 4267968 TGGC i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189203 4 - 77216781 TGGC i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099490 4 - 80997621 TGGC i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052725 4 - 8458610 TGGC i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985826 4 + 75148670 TGGC i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248294 4 + 4244037 TGGC i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4045 4 + 37134 TGCC i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 31128 4 - 4077172 TGGC i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24575 4 - 94492 TGGC i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 624843 4 - 852752 TGGT i dasNov3.JH570468 T 11792 C 0 e otoGar3.GL873537 22864121 50595 + 28711273 I e saiBol1.JH378271 1874921 0 + 3513951 C e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=197387.000000 s hg38.chr17_JH159148v1_alt 82412 56 + 88070 TGGTCTGATGATGG--AAGTTTA---------TTCTATGCAGGTAGTAATCTGTGGTAA---GTTGATCA s gorGor5.CYUI01015385v1 4144971 56 + 4267968 TGGTCTGATGATGG--AAGTTTA---------TTCTATGCAGGTAGTAATCTGTGGTAA---GTTGATCA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189207 56 - 77216781 TGGTCTGATCATGG--AACTTTA---------TTCCATGTAGATAGCGATCTGTGGTAA---GTTGATCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099494 56 - 80997621 TGGTCTGATCATGG--AACTTTA---------TTCCATGTAGATAGCGATCTGTGGTAA---GTTGATCA i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052729 56 - 8458610 TGGTCTGATCATGG--AACTTTA---------TTCCATGTAGATAGCGATCTGTGGTAA---GTTGATCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985830 55 + 75148670 TAGTCTGATCATGG--AACTTTA----------TCCATGTAGATAGTGATCTATGGTAA---GATGATCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248298 56 + 4244037 TAGTCTGATCATGG--AACTTTA---------TTCCATGTAGATAGTGATCTGTGGTAA---GATGATCA i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4049 59 + 37134 TATTCTGATGATGG--AAGTTTG---------TATTATGCAGGTAGTGATCTGTGGTGGTAAGTTGATCA i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1874921 48 + 3513951 ---------GTCAG--AAGATTG---------CTGTATAAGGATGATGGTCCTTGGCAAT--GCTGATCA i saiBol1.JH378271 C 0 I 27626 s cebCap1.NW_016107543v1 31132 56 - 4077172 TATTCTGATGATGG--AAGTTTG---------TATTATGCGGGTAGTGATCTGTGGTAA---GTTGATCA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24579 56 - 94492 TGTTCTGATGATGG--AAGTTTG---------TATTATGCAGGTAGTGATCTGTGGCAA---GTTGATCA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22914716 61 + 28711273 TAGTTTGATGATGGCAAAGCCTGGAGAGTGATTTTGGTGCAG-----GACCTG-GGTTA---GGCGATGC i otoGar3.GL873537 I 50595 C 0 s dasNov3.JH570468 624847 56 - 852752 GGGTCAGTTGACAG--TAGGTTG---------ATCTGTGCACTTGGTGGTTTTTGGTGA---GTTGATCA i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=65001.000000 s hg38.chr17_JH159148v1_alt 82468 15 + 88070 ATAACTGCAAGGCTG s gorGor5.CYUI01015385v1 4145027 15 + 4267968 ATAACTGCAAGGCTG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189263 15 - 77216781 ATAACTGCAAGGCTG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099550 15 - 80997621 ATAACTGCAAGGCTG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052785 15 - 8458610 ATAACTGCAAGGCTG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985885 15 + 75148670 ATAACTGCAAGGCTG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248354 15 + 4244037 ATAACTGCAAGGCTG i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4108 15 + 37134 ATAACTATAGGGCTG i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 31188 15 - 4077172 ATAACTATAGGGCTG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24635 15 - 94492 ATAACTATAGGGCTG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22914777 15 + 28711273 AAAACCAGAATGTGG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 624903 15 - 852752 GCAACAGGAAGGCTG i dasNov3.JH570468 C 0 I 14392 e saiBol1.JH378271 1874969 27626 + 3513951 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=54148.000000 s hg38.chr17_JH159148v1_alt 82483 14 + 88070 GCAGCCCCTAGACA s gorGor5.CYUI01015385v1 4145042 14 + 4267968 GCAGCCCCTAGACA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189278 14 - 77216781 GCAGTCCCTAGACA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099565 14 - 80997621 GCAGTCCCTAGACA i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052800 14 - 8458610 GCAGTCCCTAGACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985900 14 + 75148670 GCAGCCCCTAGACA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248369 14 + 4244037 GCAGCCCCTAGACA i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4123 14 + 37134 GCAGTCCCTAGACA i calJac3.chr5_ACFV01176693_random C 0 C 0 s cebCap1.NW_016107543v1 31203 14 - 4077172 GCAGTCCCTAGACA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24650 14 - 94492 GCAGTCCCTAGACA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22914792 13 + 28711273 CAAGTGCTTGGTC- i otoGar3.GL873537 C 0 C 0 e dasNov3.JH570468 624918 14392 - 852752 I e saiBol1.JH378271 1874969 27626 + 3513951 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=3256.000000 s hg38.chr17_JH159148v1_alt 82497 1 + 88070 ---C s gorGor5.CYUI01015385v1 4145056 1 + 4267968 ---C i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189292 1 - 77216781 ---C i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099579 1 - 80997621 ---C i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052814 1 - 8458610 ---C i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985914 1 + 75148670 ---C i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248383 1 + 4244037 ---C i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4137 1 + 37134 ---C i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1902595 1 + 3513951 ---C i saiBol1.JH378271 I 27626 C 0 s cebCap1.NW_016107543v1 31217 1 - 4077172 ---C i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24664 1 - 94492 ---C i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22914805 4 + 28711273 TTCA i otoGar3.GL873537 C 0 C 0 e dasNov3.JH570468 624918 14392 - 852752 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=1104001.000000 s hg38.chr17_JH159148v1_alt 82498 207 + 88070 ACAACAG-GCTGATTGGCAGCAGG---GCTAGCAGCAGCTGGATCCATAGCTCTGGTTTAGGCAACCTGTCAGGCAGACACACATGGGGTGGTAGCAAGTTCTCCTGTAGTAGATGG-----------------------------GTGCA-CAGAAGCTGGGCTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCGTAACAGCTG------GACCCACAGCAGGTGGGCTG---GCAGCAGGGTGTGCT s gorGor5.CYUI01015385v1 4145057 207 + 4267968 ACAACAG-GCTGGTTGGCAGCAGG---GCTAGCAGCAGCTGGATCCATAGCTCTGGTTTAGGCAACCAGTCAGGCAGACACACATGGGGTGGTAGCAAGTTCTCCTGTAGTAGATGG-----------------------------GTGCT-CAGAAGCTGGGCTGGCAGCAGCTGGACCTACTGCCAGTTTGGCCGTAACAGCTG------GACCCACAGCAGGTGGGCTG---GCAGCAGGGTGTGCT i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189293 207 - 77216781 ACAAGAG-GCTGGGCAGCAGCAGT---GCTGGTAGCAGCTGGAGCCACAGCTCTGGTCTAGGCAACCAGACAGGCAGACACACATGGTGTGGCAGCAGGTTCTCCTGCAATAGACAG-----------------------------GTGCA-CAGGAGATGGGCTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GACCTACGGCAATTGGGCTG---GCAGCAGGGTGTGCT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099580 207 - 80997621 ACAAGAG-GCTGGGCAGCAGCAGT---GCTGGTAGCAGCTGGAGCCACAGCTCTGGTCTAGGCAACCAGACAGGCAGACACACATGGTGTGGCAGCAGGTTCTCCTGCAGTAGACAG-----------------------------GTGCA-CAGGAGATGGGCTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GACCTACGGCAATTGGGCTG---GCAGCAGGGTGTGCT i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2052815 207 - 8458610 ACAAGAG-GCTGGGCAGCAGCAGT---GCTGGTAGCAGCTGGAGCCACAGCTCTGGTCTAGGCAACCAGACAGGCAGACACACATGGGGTGGCAGCAGGTTCTCCTGCAGTAGACAG-----------------------------GTGCA-CAGGAGATGGGCTGGCAGCAGCTGGACCCACTGCCAGTTTGACCATAACAGCTG------GACCTACAGCAATTGGGCTG---GCAGCAGGGTGTGTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64985915 204 + 75148670 ACAAGAG-GCTGGGCAGCAGCAGG---GCTGGCAGCAGCTGGATCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACATACATGAGGTGGCAGCAGGTTCTCCTGCAGTAGACAG-----------------------------GTGCA-CAGGAGCTGGGCTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GACCTACGGCAATTGGGCT------AGCAGGGTGTGCT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248384 207 + 4244037 ACAAGAG-GCTGGGCAGCAGCAGG---GCTGGCAGCAGCTGGATCCACAGCTCTGGTTTAGGCAACCAGGCAGGCAGACACACATGAGGTGGCAGCAGGTTCTCCTGCAGTAGACAG-----------------------------GTGCA-CAGGAGCTGGGCTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GACCTACGGCAATTGGGCTG---GCAGCAGGGTGTGCT i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4138 197 + 37134 ACAGCAG-GCTGGGCGGCAGCAAG-------------GATGGATTCACAGCTCTGGTTTAGGCAACCAGGCAGGAAGACACGCATGGGGTGGTAGCAGGTTCTCCTGCAGTACATGG-----------------------------GTGCT-CAGGAGCTGGGTTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GAGCTGCAGTAGGTGAGCTG---GCAGCAGGGTGTGCT i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1902596 210 + 3513951 ACAGCAG-GCTGGGCGACAGCAGG---GCTGGCAGCAGCTGGATCCACAGCTCTGGTTTAGGCAACCAGGAAGGCAGACACACGTTGGGTGGTAGCAGGTTCTCGTGCAGTACACAG-----------------------------GTGCA-CAGGAGCTGGTCTGGCCACAACTGGACCCACAGCTGGTTTGGCCACAGCAGCTG------GACTCACAGCAGGTGGGCTGGCAGCAGCAGGGTGTGCT i saiBol1.JH378271 C 0 T 27837 s cebCap1.NW_016107543v1 31218 207 - 4077172 ACAGCAG-GCTGGGCGGCAGCTGG---GCTGGCAGCAGCTGGATCCACAGGTCTGGTCTAGGCAACCAGGCAGGAAGGCACACATGGGCTGGTAGCAGGTTCTCCTGCAGTACATGG-----------------------------GTGCA-CAGGAGCTGGGTTGGTAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GAGCTGCAGTAGGTGAGCTG---GCAGCAGGGTGTGCT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24665 207 - 94492 ACAGCAG-GCTGGGCGGCAGCAGG---GCTGGCAGCAGCTGGATCCACAGCTCTGGTCTAGGCAATCAGGCAGGAAGACACACGTGGGGTAGTAGCAGGTTCTCCTGCAGTACATGG-----------------------------GTGCA-CAGGAGCTGGGTTGGCAGCAGCTGGACCCACTGCCAGTTTGGCCATAACAGCTG------GAGCTGCAGTAGGTGGGCTG---GCAGCAGGGTGTGCT i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22914809 211 + 28711273 GCAAGAGTGTTGATCAGCAGCAGGAAGGCTGGCAGCAGCTGGATCCACAGCCCAGGTTCAGACAGCCAGGCAGGCAGACACAGGTGGGCTGGTAGCAGGTCCTGGTGCAGTAGACAG-----------------------------GTGCA-CAGCTGCTGGGCTGGCAGCAGGAGGTGCCACAGCAAGTGGGGCGGCAGCAGCTG------GACACACAGCAGCTGGGCTG---GCAGCAGGGTGTGCG i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 639310 243 - 852752 ACAACAA-ATTGGCCGGCAGCAGG---GGTGGCAGCAGCTGGATCAGCAGTTCTGGGGATGGCAGCCAGGCAGGCAGCAGCATGTTGGATGGTAGCAGGTTCTCCAGCAGTACACGGAGCCACTGCAAGCTGGCTGGCAGCAGGTTGTGTAGCAGCAACTGGGGTGGCAGCAGCTGGATCCAACACACGTTTGGCCACAGGATCCAACACACGTTTGGCCACAAGTGGGCTG---GCAGCAGGGAGTGGT i dasNov3.JH570468 I 14392 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=581320.000000 s hg38.chr17_JH159148v1_alt 82705 121 + 88070 GCAGCAGGAAGACTGGCAGCAGCTTGTCACACAGGTGTACTGGCAGCAAGTGGTCCTGCAGCAGGTGGCCTCACAGTAGGCTGGGCAGCAGGCAGCAGGGCTGGCAGCAGCTGGATCCACA s gorGor5.CYUI01015385v1 4145264 121 + 4267968 GCAGCAGGAAGACTGGCAGCAGCTTGTCACACAGGTGTACTAGCAGCAAGTGGTCCTGCAGCAGGTGGCCTCACAGTAGGCTGGGCAGCAGGCAGCAGGGCTGGCAGCAGCTGGATCCACA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189500 121 - 77216781 GCACCAGGAATAATGGCAGCAGCTGGTCACACAAGTGGGCTGGCAGCAAGTAGTCTTGCAGCAGGTGGCTTCGCAGTAGGCTGGGTGGCAGGCAATAGGGCTGGCAGCAGCTGGATCCACA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099787 121 - 80997621 GCACCAGGAATAATGGCAGCAGCTGGTCACACAAGTGGGCTGGCAGCAAGTAGTCTTGCAGCAGGTGGCTTCGCAGTAGGCTGGGTGGCAGGCAGTAGGGCTGGCAGCAGCTGGATCCACA i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053022 121 - 8458610 GCACCAGGAATAATGGCAGCAGCTGGTCACACAAGTGGGCTGGCAGCAAGTTGTCCTGCAGCAGGTGGCTTCGCAGTAGGCTGGGTGGCAGGCAGTAGGGCTGGCAGCAGCTGGATCCACA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64986119 121 + 75148670 GCACCAGGAATAATGGCAGCAGCTGGTCACACAGGTGGGCTGGCAGCAAGTGGTCCTGCAGCAGGTGGTTTCACAGTAGGCTGGGTGGCAGGCAGCAGGGCTGGCAGTGGCTGGATCCACA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248591 120 + 4244037 GCACCAGGAATAATGGCAGCAGCT-GTCATACAGGTGGGCTGGCAGCAAGTGGTCCTGCAGCAGGTGGCTTCACAGTAGGCTGGGTGGCAGGCAGCAGGGCTGGCAGTGGCTGGATCCACA i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4335 105 + 37134 ---------------GCAGCAGCTGATCACACAGGCTGGTTGACAGCAGGTGGTCCTGCCACAGGTGGTCACACAGCAGGCTGGGTGGCAGC-AGGAGGGCTGGCAGCAGCTGGATCCACA i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1874969 117 + 3513951 GCAGCAGGAAGGCTGGCAGCAGCTGGTTACACAGGTGGGCTGGCAGCAAGTGGTCCTGCAGCAGGTGGTCTCACAGCAGGCTGGGCGGCAGC----AGGGCTGGCAGCAGCTGGATCCACA i saiBol1.JH378271 T 27837 C 0 s cebCap1.NW_016107543v1 31425 102 - 4077172 ---------------ACAGCAGCTGGTCACACAGGCTGGTTGGCAGCAGGTGGTCCTGCAGCAGGTGGTCACACAGCAGGCTGGGCAGCAGG----AGGGCTGGCAGCATCTGGATCCACA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24872 102 - 94492 ---------------GCAGCAGCTGATCACACAGGTTGGTTGGCAGCAGGTGGTCCTGCAGCAGGTGATCACACAGCAGGCTGGGCAGCAGG----AGGGCTGGCAGCAGCTGGATCCACA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915020 94 + 28711273 ---------------GCAGCAGGTGGTGACAGAGGTGGGTTTCCAGCAGGTGGTCCTGCAGCAGGTGGTTGGACAGCAAGTTGGGGGGCAGC----AGGGCTGGCAGCAGCTG-------- i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 639553 102 - 852752 GCAGCAGGAAGGGTGGCAGCAGCTGGTCACACAGGTTGGCTGGCAGCAGGTGGTC---------------TGACAGCAGAGTGGGTGGCAGC----AAGGCTGGCAGCAGCTAGATCCACA i dasNov3.JH570468 C 0 I 14129 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=143451.000000 s hg38.chr17_JH159148v1_alt 82826 36 + 88070 -------------TATCTGGTC---------------------TAGG-----------CAACTAGGCAGGCAG---------ACACACAT s gorGor5.CYUI01015385v1 4145385 36 + 4267968 -------------TATCTGGTC---------------------TAGG-----------CAACTAGGCAGGCAG---------ACACACAT i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189621 36 - 77216781 -------------GCTCTGGTC---------------------TAGG-----------CAACCAGGCAGGCAG---------ACACACGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099908 36 - 80997621 -------------GCTCTGGTC---------------------TAGG-----------CAACCAGGCAGGCAG---------ACACACGT i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053143 36 - 8458610 -------------GCTCTGGTC---------------------TAGG-----------CAACCAGGCAGGCAG---------ACACACGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64986240 36 + 75148670 -------------GCTCTGGTC---------------------TAGG-----------CAATCAGGCAGGCAG---------ACACACAT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248711 36 + 4244037 -------------GCTCTGGTC---------------------TAGG-----------CAACCAGGCAGGCAG---------ACACACGT i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4440 36 + 37134 -------------GCACTGGTT---------------------TAGG-----------CAACCAGGCGGGCAG---------ACATAGGT i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1875086 36 + 3513951 -------------GCTCTGGTT---------------------CAGG-----------CAACCGGGCAGGCAG---------ACACACGT i saiBol1.JH378271 C 0 I 27807 s cebCap1.NW_016107543v1 31527 36 - 4077172 -------------GCACTCGTT---------------------TAGG-----------CAATCAGGCAGGCAG---------ACACACGT i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 24974 36 - 94492 -------------ACACTGGTT---------------------TAGG-----------CAGTCAGGCAGGTAG---------ACACACGT i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 653784 90 - 852752 TGTTTGGCCACAGGTGCTGGTCCCACTGCAGGTGGGCTGGCAGCAGGGAGCGGTGCAACAAGAAGGCTGGCAGCACCTGGGAACACAGGT i dasNov3.JH570468 I 14129 C 0 e otoGar3.GL873537 22915114 0 + 28711273 C e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=67894.000000 s hg38.chr17_JH159148v1_alt 82862 21 + 88070 GGAATGGTAGCACGTTCTCTG s gorGor5.CYUI01015385v1 4145421 21 + 4267968 GGAATGGTAGCATGTTCTCCG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189657 21 - 77216781 GGGATGGTAGCAGGTTCTCCG i rheMac8.chr16 C 0 I 3 s macFas5.chr16 28099944 21 - 80997621 GGGATGGTAGCAGGTTCTCCG i macFas5.chr16 C 0 I 3 s cerAty1.NW_012006043v1 2053179 21 - 8458610 GGGATGGTAGCAGGTTCTCCG i cerAty1.NW_012006043v1 C 0 I 3 s chlSab2.chr16 64986276 20 + 75148670 GGGATGG-AGCAGGTTCTCTG i chlSab2.chr16 C 0 I 3 s manLeu1.NW_012106252v1 2248747 20 + 4244037 GGGATGG-AGCAGGTTCTCTG i manLeu1.NW_012106252v1 C 0 I 3 s calJac3.chr5_ACFV01176693_random 4476 21 + 37134 GGGGTGGTAGCAGGTTATCCA i calJac3.chr5_ACFV01176693_random C 0 I 3 s cebCap1.NW_016107543v1 31563 21 - 4077172 GGGGTGGTAGCAGGTTATCCA i cebCap1.NW_016107543v1 C 0 I 3 s aotNan1.NW_018505111v1 25010 21 - 94492 CAGGTGGTAGCAGGTTATCCA i aotNan1.NW_018505111v1 C 0 I 3 s dasNov3.JH570468 653874 21 - 852752 TGGCTGACAGCAGGTGGTCTG i dasNov3.JH570468 C 0 T 14240 e otoGar3.GL873537 22915114 0 + 28711273 C e saiBol1.JH378271 1875122 27807 + 3513951 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=30255.000000 s hg38.chr17_JH159148v1_alt 82883 9 + 88070 GTAGACGGG s gorGor5.CYUI01015385v1 4145442 9 + 4267968 GTAGACGGG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189681 9 - 77216781 GTAGACGGG i rheMac8.chr16 I 3 C 0 s macFas5.chr16 28099968 9 - 80997621 GTAGACGGG i macFas5.chr16 I 3 C 0 s cerAty1.NW_012006043v1 2053203 9 - 8458610 GTAGACCGG i cerAty1.NW_012006043v1 I 3 C 0 s chlSab2.chr16 64986299 9 + 75148670 GTAGATGGG i chlSab2.chr16 I 3 C 0 s manLeu1.NW_012106252v1 2248770 9 + 4244037 GTAGATGGG i manLeu1.NW_012106252v1 I 3 C 0 s calJac3.chr5_ACFV01176693_random 4500 9 + 37134 GTAGACAGG i calJac3.chr5_ACFV01176693_random I 3 C 0 s cebCap1.NW_016107543v1 31587 9 - 4077172 GTAGACAGG i cebCap1.NW_016107543v1 I 3 C 0 s aotNan1.NW_018505111v1 25034 9 - 94492 GTAGACAGG i aotNan1.NW_018505111v1 I 3 C 0 s dasNov3.JH570468 639655 6 - 852752 GTAGGA--- i dasNov3.JH570468 T 14240 C 0 e otoGar3.GL873537 22915114 0 + 28711273 C e saiBol1.JH378271 1875122 27807 + 3513951 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=399160.000000 s hg38.chr17_JH159148v1_alt 82892 99 + 88070 TGCACAGCAGCTAGGTTGGCAGCAGGATGTGTTGCAGCAACT--G------------------------------------------------------------------------GGGGGGTGGCAACAAGACTGGCAGCAGCTGGACACACAGCAGGTGGTCCTGCAGCA s gorGor5.CYUI01015385v1 4145451 96 + 4267968 TGCACAGCAGCTAGGTTGGCAGCAGGACGTGTTGCAGCAACT--G------------------------------------------------------------------------GGGG---GGCAACAAGACTGGCAGCAGCTGGACACACAGCAGGTGGTCCTGCAGCA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189690 95 - 77216781 TGCACTGCAGCTAGGTTGGCAGCAGGATGTGTTGCAGCACCTGGG------------------------------------------------------------------------GGGG---GGCAACAAGACTGGCAGCAGCTGGACACA---CAGGTGGTCCTGCAGCA i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28099977 93 - 80997621 TGCACTGCAGCTAGGTTGGCAGCAGGATGTGTTGCAGCACCT--G------------------------------------------------------------------------GGGG---GGCAACAAGACTGGCAGCAGCTGGACACA---CAGGTGGTCCTGCAGCA i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053212 93 - 8458610 TGCACTGCAGCTAGGTTGGCAGCAGGATGTGTTGCAGCACCT--G------------------------------------------------------------------------GGGG---GGCAACAAGACTGGCAGCAGCTGGACACA---CAGGTGGTCCTGCAGCA i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64986308 93 + 75148670 TGCACAGGAGCTAGGTTGGCAGCAGGATGTGTTGCAGCAACC--A------------------------------------------------------------------------GGGG---GGCAACAAGACTGGCAGCAGCTGGACACA---CAGGTGGTCCTGCAGCA i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248779 93 + 4244037 TGCACTGCAGCTAGGTTGGCAGCAGGATGTGTTGCAGCAACC--A------------------------------------------------------------------------GGGG---GGCAACAAGACTGGCAGCAGCTGGACACA---CAGGTGGTCCTGCAGCA i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4509 96 + 37134 TGTACAGCAGCTAGGTTGACAGCAGGATGTGTTGCAGCAACT--G------------------------------------------------------------------------GGAT---GGCAGCAAGACTGGCAGCAGCTGGACATGCAGCAGGTGGGTTGGCAGCA i calJac3.chr5_ACFV01176693_random C 0 I 15 s saiBol1.JH378271 1902929 168 + 3513951 CACACAGCAGGAGGGCTGGCAGCAGGGTGTGCTGCTGCAGCT--GGTCTGGCAGCAGCTGGTCACACAGGTGGGCTTCCAGCAGGTGGTCCTGCAGCAGGTGTTTTGACAGCAAGTTGGGC---GGCAGCAAGGCTGGCAGCAGCTGGACACACAGCAGGAGGGCTGGCAGCA i saiBol1.JH378271 I 27807 I 72 s cebCap1.NW_016107543v1 31596 96 - 4077172 TGTACAGCAGCTAGGTCGACAGCAGGATGTATTGCAGCAACT--G------------------------------------------------------------------------GGGC---AGCAGCAAGACTGGCAGCAGCTGGACATGCAGCAGATGGGTTGGCAGCA i cebCap1.NW_016107543v1 C 0 I 15 s aotNan1.NW_018505111v1 25043 96 - 94492 TGTACAGCAGCTAGGTTGGCAGCAGGATGTGTTGCAGCAACT--G------------------------------------------------------------------------GGGC---AGCAGCAAGGCTGGCAGCAGCTGGACATGCGGCAGATGGGTTGGCAGCA i aotNan1.NW_018505111v1 C 0 I 15 s otoGar3.GL873537 22915114 71 + 28711273 -------------GGCTGGCAGCAGGGTGTGCTGCAGCAGGT--G------------------------------------------------------------------------GGCC---------------TCCAGCAGGTGGTCCTACAGCAGGTTGTCCTGCAGCA i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 639661 84 - 852752 TGGATGACAACAAGGCTGGCCACAGGTGGACATGCAGCAGGT--A------------------------------------------------------------------------GGCT---GGCAGCTAG------------TAGTCCTGCAGGAGGTGTTTCTACAGCA i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=9959.000000 s hg38.chr17_JH159148v1_alt 82991 3 + 88070 CGT s gorGor5.CYUI01015385v1 4145547 3 + 4267968 CGT i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189785 3 - 77216781 CGT i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28100070 3 - 80997621 CGT i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053305 3 - 8458610 CGT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64986401 3 + 75148670 CGT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248872 3 + 4244037 CGT i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4620 3 + 37134 AGT i calJac3.chr5_ACFV01176693_random I 15 C 0 s cebCap1.NW_016107543v1 31707 3 - 4077172 AGT i cebCap1.NW_016107543v1 I 15 C 0 s aotNan1.NW_018505111v1 25154 3 - 94492 AGT i aotNan1.NW_018505111v1 I 15 C 0 s dasNov3.JH570468 639745 3 - 852752 AGT i dasNov3.JH570468 C 0 C 0 e otoGar3.GL873537 22915185 0 + 28711273 C e saiBol1.JH378271 1903097 72 + 3513951 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=5261.000000 s hg38.chr17_JH159148v1_alt 82994 2 + 88070 CG s gorGor5.CYUI01015385v1 4145550 2 + 4267968 CG i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189788 2 - 77216781 CG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28100073 2 - 80997621 CG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053308 2 - 8458610 CG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64986404 2 + 75148670 TG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248875 2 + 4244037 TG i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4623 2 + 37134 CT i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1903169 2 + 3513951 CG i saiBol1.JH378271 I 72 T 27632 s cebCap1.NW_016107543v1 31710 2 - 4077172 CA i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 25157 2 - 94492 CA i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915185 1 + 28711273 -G i otoGar3.GL873537 C 0 I 1 s dasNov3.JH570468 639748 2 - 852752 TG i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=101177.000000 s hg38.chr17_JH159148v1_alt 82996 15 + 88070 TAGGCTGGCAGCAAA s gorGor5.CYUI01015385v1 4145552 15 + 4267968 TAGGCTGGCAGCAAA i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189790 15 - 77216781 TAGGCTGGCAGCAAG i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28100075 15 - 80997621 TAGGCTGGCAGCAAG i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053310 15 - 8458610 TAGGCTGGCAGCAAG i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64986406 15 + 75148670 TAGGCTGGCAGCAAG i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2248877 15 + 4244037 TAGGCTGGCAGCAAG i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 4625 15 + 37134 TAGGCTGGCAGCAAG i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1875539 15 + 3513951 TAGGCTGGCAGCAAG i saiBol1.JH378271 T 27632 I 14541 s cebCap1.NW_016107543v1 31712 15 - 4077172 TAGGCTGGCAGCAAG i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 25159 15 - 94492 CAGGCTGGCAGCAAG i aotNan1.NW_018505111v1 C 0 C 0 s otoGar3.GL873537 22915187 15 + 28711273 TGGGCTGGCAGCAAG i otoGar3.GL873537 I 1 C 0 s dasNov3.JH570468 639750 12 - 852752 ---ACTGGCAGCAAG i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=5277310.000000 s hg38.chr17_JH159148v1_alt 83011 1096 + 88070 GGGAGCAGCA------GTGGGTCATGGCGTCAGGGGTGGAGGGTGCACTCCTGTTCAGAGGTGAGTTTCCTAGAGTTTGATAACGTTATTCAATCTGAACCTTTTATACA-TGGTACCCCAAAGTTTGGATTAACGAGCAGAACTTGTCTTTGATA-------------CTTCTCTAGTCTTTTGGGAAATGTCCCAAGGAGGAAGTTGTCTATTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTTTCTTAATTGACAAATAACCAGTCAGGACTATTTTCCTGAACTGAGAAATGAATCAT--TCTCCCTACCAATTAAGCACTGATCCTCATTTTTAAAGCTGAGTACAGTATTTGGTCATCTAACAGGTCCTATGTAGCTTAGTGAGATGTCAGGACAATTGTTAGTCACCATCTGTTTTTCCTTATTGCTATTTACTTTGGAAAGTACCTCTGAAGATAGGATGATGTTGAGTCATGGTGATGAGTTAAAAACCAAGTTTAGGGAGGGCTTGTGATGCCACCTGTAatgtagaagctagtataagatttatcctcctgctataaacaataataaaagctttgta-----aatatataaaacaactgtttgcagatattggatgacaatcagctttgggttatgatccttg---aaggaag--acacatg--gggt-------aaAAAAAGAAACACATGGG---------TTTGTATGTTTTCAAAA---TtgctgctgcagcacatcctgctgccagtccacctgctgcagcagctgcagctgTTATGGCCAAATGCCAGAAGAAATAGAGTCCACATAGAG-AGCAGAGG---AGAGATAGGCGTTAAAGGGGTTTATCACAATTccttctctcagtctgaaatgtgatttttgatggttaagttttctaaagctttatccagtt-aaaattatcagtcatttcttttcgaataataatatttttgtcttggtcaggaggtattt----atctacctaaaaataaaaaaaa-tcacataaatcatctagtgagga-tttaaga--ttttttttgaccttcaagatattgatacacctggaattga--tttttttc--------ctacatgatgagtgatcagaatccaagttcatcttttccatgtaaataCTTTT s gorGor5.CYUI01015385v1 4145567 1098 + 4267968 GGGAGCAGCA------GTGGGTCATGGCGTCAGGGGTGGAGGGTGCACTCCTGTTCAGAGGTGAGTTTCCTAGAGTTTGATAACGTTATTCAATCTGAACCTTTTATACA-TGGTACCCCAAAGTTTGGATCAATGAGCAGAACTTGTCTTTGATA-------------CTTCTCTAGTCCTTTGGGAAATGTCCCAAGGAGGAAGTTATCTATTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTTTCTTAATTGACAAATAATCAGTCAGGACTATTTTCCTGAACTGAGAAATGAATCAT--TCTCCCTACCAATTAAGCCCTGATCCTCATTTTTAAAGCTGAGTACAGTATTTGGTCATCTAACAGGTCCTATGTAGCTTTGTGAGATGTTAGGACCATTGTTAGTCACCATCTGTTTTTCCTTATTGCTATTTACTTAGGAAAGTACCTCtgaagataggatgatgttgagtcatgatgatgaGTTAAAAACCAAGTTTAGGGAGGGCTTGTGATGCTACCTGTAATGTAGAAGCTAGTATAAGATTTATCCTCCTGCTATAAACAGTAATAAAAGCTTTGTA-----AATATATAAAACAACTGTTTGCAGATATTGGATGACAATCAGCTTTGGGTTACGATCCTTG---AAGGAAG--ACACATG--GGGT-------AAAAAAAGAAACACATGGG---------TTTGTATGTTTTCAAAA---TTGCTGCTGCAGCACATCCTGCTGCCAGCCCACCTGCTGCAGCAGCTGCAGCTGTTATGGCCAAATGCCAGAAGAAATAGAGTCCACATAGAG-AGCAGAGG---AGAGATAGGCGTTAAAGTGGTTTATCACAATTccttctctcagtctgaaatgtgatttttgatggttaagttttctaaagcttgatccagtt-aaaattatcagtcatttcttttcgaataataatatttttgtcttggtcaggaggtattt----atctacctaaaaataaaaaaaa-tcacataaattatctagtgaggg-cttaaga--ttttttttgaccttcaagatattgatacacctggaattgatttttttttc--------atacatgatgagtgatcagaatccaagttcatcttttccatgtaaataCTTTT i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30189805 1109 - 77216781 GGGAGCAGCG------GTCGGTCATGGTGTGAGGGGTGGAGGGTGGATTTCTGTTCAGAAGTGAGTTTCCTAGAGTTTGATAACCCTATTCAATCTGAACCTTTTATACA-TGGTACGCCAAAGTTTGGATCAATGAGCAGAAGTTGTCTTTGATATTGCTTATGTGAATTTCTCTAGTTCATTGGGAAATGTCCCAGGGAGGAAGTTGTTTCTTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTCTCTTAATTGACAAGTAACCAGTCAGGACTATT---CTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCGCTGATCCTCATTTTTAAAGCTGAGTACAGTATTTGGTCATTTAACAGGCCCTATGTAGCTTGGTGAGATGTCAGGACCATTGTTGGTCACCATCTATTTTTCCTTATTGCTATTTACTTTTGGAAGCACCTCTGAAGATAGGATGATGTTGAGTCATGGTGATGAGTT-AAAACCAAGTTTAGGGAGGGCTTCTGATGCCACCTGTAATGTAGAAGCTAGTATATGATTTATCTTCCTGTTATAAACAATAATAAAAGCTTTGTA-----AATATATAAAACAACTGTCTGAAGATATTGGATGACAATCAGCTTTGGGTTATGATCCCTG---AAGGAAG--ACACATG--GGGT-------AAAACAAGAAACATACGGG---------TTTGTGTGTTTTCAAAATTGTTGCCGCTGCAGCACACCCTGCTGCCAGCCCACCTGCTGCAGCAGCTCCAGCTGTTATGGCCAAATGCCAGAAGAAATAGAGTTCACATAGAG-AACAGAGA---AGAGATAGGCATCAAAGGGGTTTATCACAGTTccttctctcagtctgaaatgtgatttctgatggttaaattttgtaaagtttgatccagtt-aaaattatcaatcatttcttttcaaataatgatatttttgtcttggtcaggaggtgttt----atctacttaaaaataaaaaaaattcacatacattatctagtgaggg-tttaaga--ttttttttgaccttcaagctattgatacacctggaattga--tttttttt--------gtacatgatgagtgatcagaatccaagctcatcttttccatgtaaataCTTTT i rheMac8.chr16 C 0 I 6 s macFas5.chr16 28100090 1109 - 80997621 GGGAGCAGCG------GTCGGTCATGGTGTGAGGGGTGGAGGGTGGATTCCTGTTCAGAAGTGAGTTTCCTAGAGTTTGATAACCCTATTCAATCTGAACCTTTTATACA-TGGTACGCCAAAGTTTGGATCAATGAGCAGAAGTTGTCTTTGATATTGCTTATGTGAATTTCTCTAGTTCATTGGGAAATGTCCCAGGGAGGAAGTTGTTTCTTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTCTCTTAATTGACAAGTAACCAGTCAGGACTATT---CTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCGCTGATCCTCATTTTTAAAGCTGAGTACAGTATTTGGTCATTTAACAGGCCCTATGTAGCTTGGTGAGATGTCAGGACCATTGTTGGCCACCATCTATTTTTCCTTATTGCTATTTACTTTTGGAAGCACCTCTGAAGATAGGATGATGTTGAGTCATGGTGATGAGTT-AAAACCAAGTTTAGGGAGGGCTTCTGATGCCACCTGTAATGTAGAAGCTAGTATATGATTTATCTTCCTGTTATAAACAATAATAAAAGCTTTGTA-----AATATATAAAACAACTGTCTGAAGATATTGGATGACAATCAGCTTTGGGTTATGATCCCTG---AAGGAAG--ACACATG--GGGT-------AAAACAAGAAACATACGGG---------TTTGTGTGTTTTCAAAATTGTTGCCGCTGCAGCACACCCTGCTGCCAGCCCACCTGCTGCAGCAGCTCCAGCTGTTATGGCCAAATGCCAGAAGAAATAGAGTTCACATAGAG-AACAGAGA---AGAGATAGGCATCAAAGGGGTTTATCACAGTTccttctctcagtctgaaatgtgatttctgatggttaaattttgtaaagtttgatccagtt-aaaattatcaatcatttcttttcaaataatgatatttttgtcttggtcaggaggtgttt----atctacttaaaaataaaaaaaattcacatacattatctagtgaggg-tttaaga--ttttttttgaccttcaagctattgatacacctggaattga--tttttttt--------gtacatgatgagtgatcagaatccaagctcatcttttccatgtaaatactttt i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2053325 1109 - 8458610 GGGAGCAGCG------GTCGGTCATGGTGTGAGGGGTGGAGGGTGGATTCCTGTTCAGAAGTGAGTTTTCTAGAGTTTGATAACCCTATTCAATCTGAACCTTTTATACA-TGGTACGCCAAAGTTTGGATCAATGAGCAGAAGTTGTCTTTGATATTGCTTATGTGAATTTCTCTAGTTCATTGGGAAATGTCCCAGGGAGGAAGTTGTTTCTTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTCTCTTAATTGACAAGTAACCAGTCAGGACTATT---CTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCACTGATCCTCATTTTTAAAGCTGAGTACAGTATTTGGTCATTTAACAGGCACTATGTAGCTTGGTGAGATGTCAGGACCATTGTTGGTCACCATCTATTTTTCCTTATTGCTATTTACTTTTGGAAGCACCTCTGAAGACAGGATGATGTTGAGTCATGGTGATGAGTT-AAAACCAAGTTTAGGGAGGGCTTCTGATGCCACCTGTAATGTAGAAGCTAGTATATGATTTATCTTCCTGTTATAAACAATAATAAAAGCTTTGTA-----AATATATAAAACAACTGTCTGAAGATATTGGATGACAATCAGCTTTGGGTTATGATCCTTG---AAGGAAG--ACACATG--GGGT-------AAAACAAGAAACATACGGG---------TTTGTGTGTTTTCAAAATTGTTGCCGCTGCAGCACACCCTGCTGCCAGCCCATCTGCTGCAGCAGCTCCAGCTGTTATGGCCAAATGCCAGAAGAAATAGAGTTCACATAGAG-AACAGAGA---AGAGATAGGCATCAAAGGGGTTTATCACAGTTCCTTCTCTCAGTCTGAAATGTGATTTCTGATGGTTAAATTTTGTAAAGTTTGATCCAGTT-AAAATTATCAATCATTTCTTTTCAAATAATGATATTTTTGTCTTGGTCAGGAAGTGTTT----ATCTACTTAAAAATAAAAAAAATTCACATACATTATCTAGTGAGGG-TTTGAGA--TTTTTTTTGACCTTCAAGCTATTGATACACCTGGTATTGA--TTTTTTTT--------GTACATGATGAGTGATCAGAATCCAAGCTCATCTTTTCCATGTAAATACTTTT i cerAty1.NW_012006043v1 C 0 I 6 s chlSab2.chr16 64986421 1102 + 75148670 GGGAGCAGCA------GTCGGTCATGGTGTGAGGGGTGGAGGGTGGATTCCTGTTCAGA-------TTCCTAGAGTTTGATAACCCTATTCAGTCTGAACCTTTTATACA-TGGTACCCCAAAATTTGGATCAATGAGCAGAAGTTGTCTTTGATG-TGTTTATGTGAATTTCTCTAGTTCATTGGGAAATGTCCCAGGGAGGAAGTTGTTTCTTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTCTCTTAATTGACAAGTAACCAGTCAGGACTATTCTCCTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCACTGATCCTCATTTTTAAAGCTGAGT--AGTCTTTGGTCATCTAACAGGTCTTATGTAGGTTGGTGAGATGTCAGGACCATTGTTAGTCACCATCTATTTTTCCTTATTGCTATTTACTTTTGGAAGCACCTCTGAAGATAGGATGATGTTGAGTCATGGTGATGAGTT-AAAACCAAGTTTAGGGAGGGCTTCTGATGCCACCCGTAATGTAGAAGCTAGTATATGATTTATCTTCCTGTTATAAACAATAATAAAAGCTTTGTA-----AATATATAAAACAACTGTCTGAAGATATTGGATGACAATCAGCTTTGGGTGATGATCCTTG---AAGGAAG--ACACATG--GGGT-------AAAACAAGAAACATACGGG---------TTTGTGTGTTTTCAGAATTGTTGCCGCTGCAGCATACCCTGCTGCCAGCCCACCTGCTGCAGCAGCTCCAGCTGTTATGGCCAAATGCCAGAAGAAATAGAGTTCACATAGTG-AACAGAGA---AGAGATAGGCATGAAAGGGGTTTATCACAGTTccttctctcagtctgaaatgtgatttttgatggttaaattttctaaagtttgatccagtg-aaaattatcaatcatatcttttcaaataatgatatttttgtcttggtcaggagatattt----atctacttaaaaataaaaaaaattcacatacattatctagtgaggg-tttaaga--ttttttttgaccttcaaactattgatacacctggaattga--tttttttc--------gtacacaatgggtgatcagaatccaagctcatcttttccatgtaaataCTTTT i chlSab2.chr16 C 0 I 6 s manLeu1.NW_012106252v1 2248892 1105 + 4244037 GGGAGCAGCA------GTCGGTCATGGTGTGAGGGGTGGAGGGTGGATTCCTGTTCAGA-------TTCCTAGAGTTTGATAACCCTATTCAGTCTGAACCTTTTATACA-TGGTACCCCAAAATTTGGATCGATGAGCAGAAGTTGTCTTTGATATTGTTTATGTGAATTTCTCTAGTTCATTGGGAAATGTCCCAGGGAGGAAGTTGTTTCTTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTATTTGCTCTCTTAATTGACAAGTAACCAGTCAGGACTATTCTCCTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCACTGATCCTCATTTTTAAAGCTGAGTAGAGTATTTGGTCATCTAACAGGTCTTATGTAGGTTGGTGAGATGTCAGGACCATTGTTAGTCACCATCTATTTTTCCTTATTGCTATTTACTTTTGGAAGCACCTCTGAAGATAGAATGATGTTGAGTCATGGTGATGAGTT-AAAACCAAGTTTAGGGAGGGCTTCTGATGCCACCTGTAATGTAGAAGCTAGTATATGATTTATCTTCCTGCTATAAACAATAATAAAAGCTTTGTA-----AATATATAAAACAACTGTCTGAAGATATTGGATGACAATCAGCTTTGGGTTATGATCCTTG---AAGGAAG--ACACATG--GGGT-------AAAACAAGAAACATACGGG---------TTTGTGTGTTTTCAAAATTGTTGCCGCTGCAGCACACCCTGCTGCCAGCCCACCTGCTGCAGCAGCTCCAGCTGTTATGGCCAAATGCCAGAAGAAATAGAGTTCACATAGAG-AACAGAGA---AGAGATAGGCATCAAAGGGGTTTATCACAGTTCCTTCTCTCCACCTGAAATGTGATTTCTGATGGTTAAATTTTGTAAAGTTTGATCCAGTT-AAAATTATCAATCATTTCTTTTCAAATAATGATATTTTTGTCTTGGTCAGGAGGTGTTT----ATCTACTTAAAAATAAAAAAAATTCACATACATTATCTAGTGAGGG-TTTAAGA--TTTTTTTTGACCTTCAAGCTATTGATACACCTGGTATTGA--TTTTTTTT--------GTACATGATGAGTGATCAGAATCCAAGCTCATCTTTTCCATGTAAATACTTTT i manLeu1.NW_012106252v1 C 0 I 6 s calJac3.chr5_ACFV01176693_random 4640 1050 + 37134 GGGAGCAGCA------GTGGGTCACAGTGTCAGGGGTGGAGAGTGGGTTCCTGTTCAGAGGTGAGTTTCCTAGAGCTTGATAATTCTATTCAATTGGAACCTTTTAGACA-TGGTACCCCAAAGTTTGGACCAATGAGCAGAATTTTTCTTTGATATAATTTATGTGAATTTCTCTAGTCCATTGGGAAATGTACCAGAGAGGAAGTTGTCTCTTCAGCACTGTGTATTTTCTTTGAGTAATTTATTTGTTTGCTTTTTTAATTGAAAAATAACCA-CCAGAACTATTTTCCTGAACTGAGAAATGAATCAC--TCTCCC--TCAATTAAGCACCGATCCTCATTTTTAAAGCTGAGTACAGTATTTAGTCATCTAACAGATTCTATGTAGCTTGGTGAGATGTCAGGACCAGTGTTAGTCACCATCTATTTTTCCTTATTGCTGTTTACCTTGGGAAGCACCTCTGAAATAGGAGTGATGTTGAATCATGGTGATGACTTAAAAACCAAGTTTAGgga-ggcttctgatgccacctgcaatgtagaagctagcataagatttattttcctgctataaacaataataaaagctttgta-----aatatatgaaacaactgtttgcagatattggataacaatcagctttgggttatggttcttg---aaggaag--atacatg--gggt------aaAGAAAAGAAACACATGGG---------TTTGTATATTTTCAAAA---TTGC-----------------------------------------------------------AATGCCAGAAGAAATAGAGTCCATATAGGG-AGCAAGAAGAGAGAGAAAGGCATTGAA-GAGTTTATCACAATTGcttctctcactctgaaatgtgattttggatggttaaattttctaaagcttaatccaggt-aaaattatcaattatttcttttaaaataatactatttttgtctcaggcaggaggtattt----atctacctaaaaataaaaaatattcgtatacattatctagttagggttttaaga-tttttttttg--cttcaagctattaatacacgtggaattga--tttttttc--------acacatgataagtgatcagaatccacgttcatcttctccatgtagataCTTTT i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1890095 1052 + 3513951 gggatcagCAAGGGCCGTGGGTAATGGTGTCAGGGGTGGAGAGTGGGTTCCTGTTCAGAGGTGAGTTTCCTAGAGCTTGATAACCCTATTCAGTCTGAACCTTTTAGACA-TGGTACCCCAAAGTTTGGACCAATGAGCAGAACTTGGCTGTGATATTGTTTATGTGAATTTCTCTAGTCCACTGGGAAATGTTCCAGAGAGGAAGTTGTCTCTTCAGTGCTGTGAATTTTCTTTGAGTAATTGATTTGTTTGCTTTTTTAATTGACAAATAACCA-TCAGAACTATTTTCCTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCACTGATCCTCATTTTTAAAGCTGAGTACAGTATTTGGTCATCTCACAGATTCTACGTAGCTTGGTGAGATGTCAGGACCATTGTTAGTCACTAGCTATTTTTCCTTATTGCTATTTACTTTGGGAAGCACCTTTGAAATAGGAATGATGTTGAATCATGGTGATGACTTAAAAACCAAGTTTAGGGA-GGCTTCTGATGCCACCTGCAATGTAGAAGCTAGCATAAGATTTATCTTCTGGCTATAAACAATAATAAAAGCTTTGTA-----AATATATGAAACAACTGCTTGCAGATATTGGATAACAATCAGCTTTGGGTTATGGTTCTTG---AAGGAAG--ATACATG--GGGT------TAAAAAAAGAAACACATGGG---------TTTGTATATTTTCAAAA---TTTC-----------------------------------------------------------AATGACAGAAGAAATAGAGTCTATATAGCG-AGCAAGAAGAGAGAGACAGGCATTGAAGGAGTTTATCACAATTGCTTCTCTCAGTCTGAAATGCGATTTTGGATGGTTACAT---------CTTGACCCaggc-aaaattatcagttatttcttttaaaataatactatttttatcccggtcaggaggtattt----atctacctaaaaataaaaaatattcacctacattatctagttaggattttaaga-tttttttttggctttcaagctattaatacacctggaattga--tttttttc--------gtacatgataagtgatcagaatccaagttcatcttctccatgtagataATTTT i saiBol1.JH378271 I 14541 C 0 s cebCap1.NW_016107543v1 31727 1045 - 4077172 GGGAGCAGCA------GTGGGTAATGGTGTCAGGGGTGGAGAGTGGGTTCCTGTTCAGAGGTGAGTTTTCTAGAGCTTGATAACTCTATTCAATCTGAACGTTTTAGACA-TGGTACCCCAAAGTTTGGACCAATGAGCAGAACTTGTCTTTGATATTGTTTATGTGAATTTCTCTAGTCCATTGGGAAATGTTCCAGAGAGGAAGTTGTCTCTTCAGTGCTGTGAATTTTCTTTGAATAATTGATTTGTTTGCTTTTTTAATTGACAAATAACCA-TCAGAACTATTTTCCTGAACTGAGAAATGAATCAT--TCTCCCTATCAATTAAGCACTGATCCTCATTTTAAAAGCTAAGTACAGTATTTGGTCATCTAACAGATTCTATGTAGCTTGGTGAGATGTCAGGACCATTGTTAGTCACCATCTATTTTTCCTTATTGCTGTTTACTTTGGGAAGCACCTTTGAAATAGAAATGATGTTGAATCATGGTGATGACTTAAAAATCAAGTTTAGGGA-GGCTTCTGATGCCACCTGCAATGTAGAAGCTAGCATAAGACTTATCTTCCTGCTATAAACAATAATAAAAGCTTTGTA-----AATATATGAAACAACTGTTTGCAGATATTAGATGACAGTGAGCTTTGTGTTATGGTTCTTG---AAGGAAG--ATACATGGTGGGG------GGGGGGAAGAAACAGATGGG---------TTTGTATATTTTCAAAA---TTGC-----------------------------------------------------------AATGCCAGAAGAAATAGAGTCCGTATAGGG-AGCAAGAAGAGAGAGACAAGCATTGAAGGAGTTTATCATAATTGCTTCTCTCAGTCTGAAATGTGATTTTGGATAGTTAAATTTTCTAAAGCTTGACCCAGGT-AAAAttatcaattatttcttttaaaataatactatttttgtcttggtcaggaggtattt----atctacctaaaaataaaaaattttcacatacattatctagttagggttttaaga-tttttttttggccttcaagctattaatacacctggaattgatttttttttc--------gtacatgataagtgatcggaatccaagttcatcttttcc-------------- i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 25174 1061 - 94492 GGCAACAGCA------GTGGGTAATGGTGTCAGGGGTGGAGAGTGGGTTCCTGTTCAGAGGTGAGTTTCCTAGAGTTTGATAACCCTATTCAATCTGAACCTTTTAGACA-TGGTACCCCAAAGTTTGGGCCAATGAGCAGAACTTGTCTTTGATATTGTTTATGTGAATTTCTCTAGTCCATTGGGAAATGTTCCAGAGAGGAAGTTGTCTCTTCAATACTGTGAATTTTCTTTGAGTAATTCATTTGTTTGCTTTTTTAATTGACAAATAACCA-TCAGAACTATTTGCCTGAACTGAGAAATGAATCAT--TCTCCCTATCAGTTAAGCACTGATCCTCATTTTAAAAGCTGAGTACAGTATTTGGTCATCTAACAGATTCTATGTAGCTTGCTGAGATGTCAGGACCATTGTTAGTCACCATCTATTTTTCCTTATTGCTGTTTACTTTGGGAAGCACCTCTGAAATAGGAATGATGTTGAATCATGGTGATGACTTAAAAACCAAGTTTAGgga-ggcttctgatgccacctgcaatgtagaagctggcataagatttatcttcctgctataaacaataataaaagctttgta-----aatatgtgaaacaattgtttgcagatattagataacaatcagcTTTGGGTTATGGTTCTTG---AAGGAAG--ATACATG--CGGTTAAAAAAAAAAAAAGAAACACATGTG---------TTTGTATATTTTCAAAA---TTGC-----------------------------------------------------------AATGCCAGAAGAAATAGAGTCCATATAGGG-AGCAAGAAGAGACAGACAGGCATTGAAGGAGTTTATCACAATTACTTCTCTCAGTCTGAAATGCGATtttggatggttaaattttctaaatcttgacccaggt-aaaattatcaattattccttttaagataatactatttttgtcttggtcaggaggtattt----atctacctaaaaataaaaaatattcacatacattatctagttacggttttaaga-tttttttttggccttcaagctattaatacatctggaattgt--tttttttc--------gtacatgataagtcatcagaatccaagttcatcttttccatgtagataCTTTT i aotNan1.NW_018505111v1 C 0 I 6 s otoGar3.GL873537 22915202 1077 + 28711273 GGGAGCAGCA------GTGGGTCATGTTATCCTGTGTGGAGGATGGGTTCTTGTTTAGAGGTGAGTTTCCCAGAATCTGCTGATGTCTTCCAATGTGTACCTTTTATACACTGGGCTTCCGAAGTTTAGACCAATCAGCAGAACTTTCCTTTGATATTGTTTATGTTAAGTTCTCTAGGCCATGGGAAAATGCCCCAAGGAGGAAGTTGTTTTTTAAGTATTAGGAATTTTCTCTG-GTAATTGATTTGTTTGTTCTTCTAATTGACAAATAACCAATCAGCACTATTTTCCTGAAATGAGATATAATTCATCATCTCCACATCAATTAAGCAATAATTCTCATTTTTAAAGTTGTATACAGCATTTGGTCATCTAACAGGTCCAGCTTAACTTGGTGAGAGGTCAGGATAATTGCCAGCCTCCTTCCATTTCCCCTGCGAGCTATTTATATTTGGAAGCACCTTTGAAAAGGGTGTGATGTTGAATCATGTGGATGAGTT-AAAACCAAGTTTAAGGA-AGCTTCTGATACGTCCCATAATGTAGAAGCTAATATAAGACTGATTTTCCTGCTATAAGCAATGATGAAAGGTGGGTATATACAGTATGCAAGACACATGTTTACAGATATTGAACCCCAATCAACTTTTGGTTATAATACTGA---GGGGAAGAAATACATG--GGGT-------GAGACCCAATTTATCTCAGAATTCTCCTCTTATGTAACTCCCAAA---CTGC-----------------------------------------------------------AATGCCAGAAGGAATAGAGTCCAAGTAGAGTGGCAAGAAGATAGAAACAGGCCTTGAATAGGTTTATTATACTTCATTCTCTAAGCTCAAAATATGATTTTTAATGATTTCATTTTGTTAAGTTTGATGTATTTGAAAATTATCAGTGATTTCTTC----AAAATAATACTATTGTCTTGCTCAGGAGATATTGTGAAGTTTATT---AAGGAAAAATTATTAATGTAAATTGTCTAGTAAGTGTTTTAAGA---ATTTTATGATCTTCAAGCTATTAATATACCTGCAATTGA--TTTTTTTTTTTTTTTGGTACATGATGAGTGATTGGAATCCAAGTTCATCTTTTCCATGTAGATACTTTT i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 639762 785 - 852752 GGGAGCAGCA------GTGGGTCATGGTGTCAGGTGTGGAAGGTGGGTTCCTGTTTAAAGGTGAGTTTTCCAGTTTCTGAGAACTCCTTCTCTCCAGGGGTTTTTATACACTGGACCCCCAATGTTGGGACCAATGAGCAGAACT---CCTTGTTGTTGTTTATGTTG-TTTCCATGGACCATGGGGAAGTGAACCAAGGAAGAAGTTATTCCTTAAGTGTTAAGAATTTTCTCAGGGCAATTGATTT-TTTG-TTTCTTAACTAATAGATAAAAA--TAAGACTGTTTTTCAGAAATGAGAGATG--CCAT--C----------ATTAAGCACTGAT----------AAACCTG---------TTGTGTC-------------------------------------ACAAGTGTCAGTCTGCATCTATTTTCTCTTGGTGGTAGTTACATTGGGAAGAATCTCTGAAGAGAGGGTGATG-------AAGATGATGAGTT-AAAACCAAGTTTAGGGA-GGCTCTAGATTCCACCTGTAATGTGGAAGCTAGTATAggatttacccacctgccgtaaataataataaaagctgggga-----aatatttaaaacaactatttttag------gacagcaatcactttcggagtacaattcttgaacaagagaa--actcatg--aggt-------gaa---------------g---------cccacattttccccagA-------------------------------------------------------------------------------------------------------------------------------------------TCTTTctct--------------------------------------------------tt-a--------------------------------------ttcctggtcaagcgctatct----ccccacctcaagatcaaaagtcattcaataaattatctaataagagtgttaaggttttgttttttatctgtaagtcattaattctcctagaattga--cttttt----------gtgcattatgtatggctggaataccattttatcttttccatgtggatac---- i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=-13159.000000 s hg38.chr17_JH159148v1_alt 84107 36 + 88070 CCATGTAAATACTGGAAACAGCTTTGATTATGATTC s gorGor5.CYUI01015385v1 4146665 36 + 4267968 CCATGTAAATACTGGAAACAGCTTTGATTATGATTC i gorGor5.CYUI01015385v1 C 0 C 0 s macFas5.chr16 28101199 3 - 80997621 ---------------------------------ttc i macFas5.chr16 C 0 I 3 s calJac3.chr5_ACFV01176693_random 5690 6 + 37134 ---------TACCAG--------------------- i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1891147 6 + 3513951 ---------TACCAG--------------------- i saiBol1.JH378271 C 0 C 0 s otoGar3.GL873537 22916279 9 + 28711273 ------TTATTCCAG--------------------- i otoGar3.GL873537 C 0 C 0 s dasNov3.JH570468 640547 22 - 852752 ----------attggttccagcTTTGATCAAT---- i dasNov3.JH570468 C 0 C 0 e aotNan1.NW_018505111v1 26235 6 - 94492 I e cebCap1.NW_016107543v1 32772 0 - 4077172 C e manLeu1.NW_012106252v1 2249997 6 + 4244037 I e chlSab2.chr16 64987523 6 + 75148670 I e cerAty1.NW_012006043v1 2054434 6 - 8458610 I e macNem1.NW_012014910v1 2140493 7289 + 10377808 I e rheMac8.chr16 30190914 6 - 77216781 I a score=460333.000000 s hg38.chr17_JH159148v1_alt 84143 81 + 88070 CTTTGATTATGGAACATTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt s gorGor5.CYUI01015385v1 4146701 81 + 4267968 CTTTGATTATGGAACATTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30190920 81 - 77216781 CTTTGATTGTGGAACGTTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i rheMac8.chr16 I 6 C 0 s macFas5.chr16 28101205 81 - 80997621 cTTTGATTGTGGAACATTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i macFas5.chr16 I 3 C 0 s cerAty1.NW_012006043v1 2054440 81 - 8458610 CTTTGATTGTGGAACATTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i cerAty1.NW_012006043v1 I 6 C 0 s chlSab2.chr16 64987529 81 + 75148670 CTTTGATTGTGGAACATTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i chlSab2.chr16 I 6 C 0 s manLeu1.NW_012106252v1 2250003 81 + 4244037 CTTTGATTGTGGAACATTTTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i manLeu1.NW_012106252v1 I 6 C 0 s calJac3.chr5_ACFV01176693_random 5696 81 + 37134 CTTTGACTATGGAACATTCTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1891153 81 + 3513951 CTTTGATTATGGAACATTCTCAGCTTTATTGCTGGATatgttctcattttcatccagagtattatttatttgtgtcttctt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 32772 73 - 4077172 --------atGGAACATTCTCAGCTTTATTGATGGATatgttctcattttcatccagggtattatttatttgtgtcttctt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 26241 81 - 94492 CTTTGGTTATGGAACATTCTCAGCTTTATTGCTGGATatgttctcattttcatccagaatattatttatttgtgtcttctt i aotNan1.NW_018505111v1 I 6 C 0 s otoGar3.GL873537 22916288 81 + 28711273 CTTTTATCAGAGAACATTTTTTGCTTTATTGCTAGGTATGTCCCCATTTTCCTTCAGAATATTATATATGTTTATCTGCTT i otoGar3.GL873537 C 0 N 0 s dasNov3.JH570468 640569 65 - 852752 -----------GACCATTCTATGCTTTATTCTTAATTCAGTCCTTA-TTTCATCCTTAATATTAGTTA----TGACTTCTT i dasNov3.JH570468 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=255790.000000 s hg38.chr17_JH159148v1_alt 84224 63 + 88070 tacatttcttgatcaatcttgtcaatggcttatcatttattggta-----ttttttttgaaaaag----aaa s gorGor5.CYUI01015385v1 4146782 63 + 4267968 tacatttcttgatcaatcttgtcaatggcttatcatttattggta-----ttttttttgaaaaaa----aaa i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30191001 64 - 77216781 tacatttcttgatcaatcctgtcagtggcttatcatttattag--------tttttttgaaaaagaaacaaa i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28101286 64 - 80997621 tacatttcttgatcaatcctgtcagtggcttatcatttattag--------tttttttgaaaaagaaacaaa i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2054521 65 - 8458610 tacatttcttgatcaatcttgtcagtggcttatcatttattag-------ttttttttgaaaaagaaacaaa i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64987610 65 + 75148670 tacatttcttgatcaatcttgtcagtggcttatcatttattag-------ttttttttgaaaaagaaacaaa i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2250084 64 + 4244037 tacatttcttgatcaatctggtcagtggcttatcatttattag--------tttttttgaaaaagaaacaaa i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 5777 69 + 37134 tatatatcctgatcaatcttgtcagtggcttaccacttattagta---tttttttttagaaaaagaaacaaa i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1891234 69 + 3513951 tatatatcttgatcaatcttgtcagtggcttgtcatttattagta---tttttttttagaaaaagaaacaaa i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 32845 72 - 4077172 tatatatcttgatcaatcttgtcagtggtttatcatttattagtattttttttttttagaaaaagaaacaaa i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 26322 72 - 94492 taaatatcttgatcaatcttgtcagtggcttatcatttattagtatttttgttttttagaaaaagaaacaaa i aotNan1.NW_018505111v1 C 0 C 0 s dasNov3.JH570468 640634 58 - 852752 TCTTTTTCTTGAACACCTGTGACAGTGATTGATCA---ATTTG--------TTTAATTAAAAAAGTAAA--- i dasNov3.JH570468 C 0 N 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=188030.000000 s hg38.chr17_JH159148v1_alt 84287 45 + 88070 ttttggctttgttcatcttctctgtgatatcgtttttaactagtt s gorGor5.CYUI01015385v1 4146845 45 + 4267968 ttttggctttgttcatcttctctgtgatatcgtttctaactagtt i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30191065 45 - 77216781 ttttggctttgttcatcttcactctaatatcattgttaactagtt i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28101350 45 - 80997621 ttttggctttgttcatcttcactctaatatcattgttaactagtt i macFas5.chr16 C 0 C 0 s cerAty1.NW_012006043v1 2054586 45 - 8458610 ttttggctttgttcatcttctctctaatatcgttgttaactagtt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64987675 42 + 75148670 ttttggctttgt---tcttctctctaatatcgttgttaactagtt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2250148 45 + 4244037 ttttggctttgttcatcttctctctaatatcattgttaactagtt i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 5846 45 + 37134 ttttggctttgttcatattccctgtgatatctttgttaactagct i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1891303 45 + 3513951 ttttggctttgttcatattctctgtgatatctttgttagctagtt i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 32917 45 - 4077172 ttttggctttgttcatattctctgtgatatctttgttaactagtt i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 26394 45 - 94492 ttttggctttgttcatattctctgtgatatctttgttaactagtt i aotNan1.NW_018505111v1 C 0 C 0 e macNem1.NW_012014910v1 2140493 7289 + 10377808 I a score=73876.000000 s hg38.chr17_JH159148v1_alt 84332 15 + 88070 cattgatttacattt s gorGor5.CYUI01015385v1 4146890 15 + 4267968 cattgatttacattt i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30191110 15 - 77216781 cattgatttACATTt i rheMac8.chr16 C 0 I 1698 s macFas5.chr16 28101395 15 - 80997621 cattgatttACATTt i macFas5.chr16 C 0 I 2469 s macNem1.NW_012014910v1 2147782 15 + 10377808 CATTGATTTACATTT i macNem1.NW_012014910v1 I 7289 C 0 s cerAty1.NW_012006043v1 2054631 15 - 8458610 cattgatttacattt i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64987717 15 + 75148670 cattgatttatattt i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2250193 15 + 4244037 cattgatttactttt i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 5891 15 + 37134 catcaatttccatct i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1891348 15 + 3513951 catcaatttacatct i saiBol1.JH378271 C 0 C 0 s cebCap1.NW_016107543v1 32962 15 - 4077172 catcaatttacatct i cebCap1.NW_016107543v1 C 0 C 0 s aotNan1.NW_018505111v1 26439 15 - 94492 catcaatttacatct i aotNan1.NW_018505111v1 C 0 C 0 a score=13331349.000000 s hg38.chr17_JH159148v1_alt 84347 2618 + 88070 tatgctattttggttgttttcctttttcttattcacttaggtgaacacttagttcatttatttttaggttttattcttgtttaatatttaaatattaaaggctatttaaagtgtgtacattttatcaaagatca-ttttataacaccccacaagtcttgatatgtaatattttcattataattgagttacacattt---tttcCTTAACATTAGAGATTCTTCCATTTTGGTCTTCCAAGTCAGTATATCTTCTGCAGCTTATCTCACTTATTGTGTACTTTAATGACTATATGCTCTATTATTAATTTAGTATCAGATATTATGCCTGCTTGTGTCTCCTACCCCATTATACATGTTTG-TTTTTATTAATttttca-ttttgaaataatttcatactcatagaaaattgtaaacacagtacaaaggattcccatatgccttcacttggattcctcaaatgttaacattttaccatgcttctttaacattatttctatacatatatg----tgttactactgttggtttttaaaagtaagttgcagatagaatttccctttatcactaaatacCACTTTATCCCTATGTACTTCAGTGTGTGTTTCTT--GTCACAGCCCAATGATCAAAACCAAAATGTTAATGCCGTTGCAGGATA--GTCTCTGGTTGGTTCTTATTCA-------------------------TGTTGTGTGTGTG-------------------------TGTGtttttgtatttgtctatattggtaatagcttcctttatgtctttaaatgcatttattatgtttagttaaaaCCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccatattctttctgctaagtacaactaaaaattctggatattatatataaagcaaacacgagaggactctgaaaggtggagtgaagaaagcagccaggctagaagcctcaggacttaaggaacaataaggtggggttctctgggttttctttgtgctgcaagtaccccccagacttggagcttgagaagcctgtaactctgaaactctagtggatg----------------cacacacacacacaca--------------cacacacac-----------aca---cacacagttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagatggtatctgctgtgctccagaaacaactacagcttcactgccaatcactccagtaaaagccgggtgaggagatagacttccatccctgagaagctgtaatgagtttccctaacacctcccactgagttaatgtctgagaaggccaagtagggctgtgaaaccctaatctctgccagccagtaa-tgacccccgtccccaac------agac------atagacatagagtgccagtgtagaccatgtgaagggccggagttctcatctctgctcagcagtaatgatgtgctcccctaccttgattgtcagcacaggttgaataggggaactaatc-------------------------------------------taccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagagaaagccagccaaaacaaaagattacataagatcc--------------------------agagtttcataacataatacaaacagggccagatactaat--aaaaatcacttaacatacaaaaaccaggaggatatgtaactggatgaaaaaagacaatcaataaatgccaacgttgagatatcagatatgttagaattatctgacaaagagtttaaagcaagtcatgataaaaatacatcaatgaagccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggaggatcttgaggtcaagagattgagaccatcctggacaacatggtgaaaccctctctctaccaaaaacacaaaaattatttgggtgtggtggcggccccctgtagtcccaa----------------------------------ctactcaggaggctgaggcaggagaatcgcttgaaccagggagttggaggt------tgcagtgagccaagatcgggccactgcactccagcctggtgacaaagcaagactccgtct--aaaaaaaa-g-aaaa-gtcaatgagcaaaacataaagtgtatgtttaaaatatactttaaacaaatgaaagagtagaaagtgccacaaataaataaaagatacaatga------------------tatatgtgaattttggaact-caaaaacccaataaccaaaataaaaggctcagttgatggctcaacagcagaacggaggtaaaaagaaaagtatcagtgaactagaagatagaacattaggaaatgtccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatttaacagagcttaagggacctgtgggact-aaaacaaattatctaatattcatctcaccagagtcctagaaggaaagatgaaagagggcaggggtgaaaaagtactcaaaaacaatatagttgaaaatctccccaattaac-------cgagagacataaacctacaaattcaagaaggtgaacaaatcccaaacaggataagctcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagataaagaaaaagttgtaaatgcaacaagagaaagaaaaactttatctttaggggaaaacaattaaaactacagtggatttctcattaTTTTT s gorGor5.CYUI01015385v1 4146905 2624 + 4267968 tatgctattttggttgttttcctttttcttattcacttaggtgaacacttagttcatttatttttaggttttattcttgtttaatatttaaatattaaaggctatttaaagtgtgtacattttatcaaagatca-ttttataacaccccacaagtcttgatatgtaatattttcattataatcgagttacacattt---tttcCTTAACATTAGAGATTCTTCCATTTTGGTCTTCCAAGTCAGTATATCTTCTGCAGCTTATCTCACTTATTGTGTACTTTAATGACTATATGCTCTATTATTAGTTTAGTATCTGATATTATGCCTGCTTGTGTCTCCTACCCCATTATACATGTTTG-TTTTTATTAATttttca-ttttgaaataatttcatactcatagaaaattgtaaacacagtacaaaggattcccatatgccttcacttggattcctcaaatgttaacattttaccatgcttctttaacattatttctatacatatatg----tgttactactgttggtttttaaaagtaagttgcagatagaatttccctttatcactaaataccactttatccctatgtacttcagtgtgtatttctt--GTCACAGCCCAATGATCAAAACCAAAATGTTAACGCCGTTGCAGGATA--GTCTCTGGTTGGTTCTTATTCA-------------------------TGTTGTGTGTATG-------------------------TGTGTTTTTGTATTTGTCTATATTGGTAATAGCTTCCCTGATGTCTTTAAATGCATGTATTATGTTTAGTTAAAGCCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccatattctttctgctaagtacaactaaaaattctggatattgtatataaagcaaacacgagaggactctgaaaggtggagtgaagaaagcagccaggctagaagcctcaggacttaaggaacaataaggtggggttctctgggttttctttgtgctgcaagtaccc---------ggagcttgagaagcctgtaactctgaaactctagtggatgca--cacacacacacacacacacacacacaca--------------cacacacac-----------aca---cacacagttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagatggtatttgctgtgctccagaaacaactacagcttcactgccagtcactccagtaaaagccgggtgaggagatagacttccatccctgagaagctgtaatgagtttccctaacacctcccactgagataatgtctgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-tgacccccgtccccaac------agac------gtagacatacagtgccagtgtagaccatgtgaagggccggagttctcatctctgctcagcagtaatgatgtgctcccctaccttgattgtcagcacaggttgaataggggaactaatt-------------------------------------------taccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagagaaagccagccaaaacaaaagattacataagatcc--------------------------agagtttcataacataatacaaacagggccagatactaac-aaaaaatcatgtaacatacaaaaaccaggaggatatgtaactggatgaaaaaagacaatcaataaatgccaacgttgagatatcagatatgttagaattatctgacaaagagtttaaagcaagtcatgataaaaatacatcaatgatggcaggcatggtggctcgtgcctgtaatcccagcactttgggaggccgaggtgggaggatcttgagatcaagagatcgagaccatcctggacaacatggtgaaaccctctctctaccaaaaacacaaaaattatctgggtgtggtggcggccccctgtagtcccaa----------------------------------ctattcaggaggctgaggcaggagaatcgcttgaaccagggagtcggaggt------tgcagtgagccaagatcggaccactgcactccagcctggtgacaaagcaagactccgtct--aaaaaaaa-g-aaaa-gtcaatgagcaaaacataaagtgtatgtttaaaatatactttaaacaaatgaaagagtagaaagtgccacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-caaaaacccaataaccaaaataaaagtctcagttgatggctcaacagccgaacggacgtaaaaagaaaagtatcagtgaactagaagatagaacattaggaaatgtccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatttaacagagcttaagggacctgtgggact-aaaacaaactatctaatattcatctcaccagagtcctagaaggaaagatgaaagagggcaggggtgaaaaagtactcaaaaacaatatagttgaaaatctccccaattaac-------cgagagacataaacctacaaattcaagaaggtgaacaaatcccaaacaggataagctcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagataaagaaaaagttgtaaatgcaacgagagaaagaaacactttacctttaggggaaaacaatgaaaactacggtggatttctcattattttt i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30192823 2720 - 77216781 TATGCTATTTTGACtgtttttctttttcttattcactaagatgaactctcagttcatttattttt--gttttattcttgtttaatatttaaatattaaaggctatttaaagtgtatacattttatcaaagatcatttttataacaccccacaagtcttgatatgtaatattttcattataaatgagttacacatttttctttcctttacattatagatttttccgctttgGTCTTCCAAGTCAGTATATCTTCTGCAGTTTATCTCACTTATTGTGTACTTTAATGACTGTATGCTCCATTATTAGTTTAGTATCTGATATTGTGCTTGGTTGTGTCTCCCCCCCCATTATACATGTTTGttttttattaatttttca-ttttgaaataatttcatactcatagaaagttctaaacatagtacaaaggattcccatatgccttcacttggattcctcaaacgttaacattttaccatgcttctctaacattatttctatatatatatgtgtgtgttactactgttggtttttaaaagtaagttgcagatagaatttcccattatcactaaataccactttatccctatgtacttcagtgtgtatttctttagtcacagcctaatgatcaaaaccaaaatattaacaccaatgcaggatattgtctCTGGttggtttttattcatggtgtgtgtgt---------------gtgtgtgtgtgttgtgtgtgcgcgcgcgcgtgtgtgtgtgtgtttgtatttgtcaatattggtaatagcttcccttatgtctttaaatgcatttattatgtttagttaaaaCCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccacattctttctgctaagtacaactaaaaattctggatattgtatacaaagcaaacacaagaggactctgaaaggtgaagtgaagaaagcagccaggctagaagcctcaggacttaaggaacaataaggtggggttctctgggttttctttttgctgcaagtaccc--cagacttggagcttgagaagcctgcaactctgaaactctaatggatgcgcacgcacacacacacacacacacacacaca--------------cacacacac-----------aca---cacaaagttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagaaggtatctgctgtgctccagaaacaactatggcttcactgccagtcacaccagtaaaagccgggtggggagatagacttccatccctgagaagctgtgatgagtttccctaacacccgccactgagatagtgtccgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-agacccccgtccccaac------agacatagatgtagacatagagtgtcagtggagaccatgtggagggccggagctctcatctctgccccgcagtaatggtgtgctcccctaccttgcttgtcagcacaggctgaataggggaactgatctattcagcgaactaatctattcagggaactaatcttgtcacattaccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagagaaagccagccaaaatgaaagattacataagatcc--------------------------agagtttcataacataatacaaagagggccaggtactaat-aaaaaatcacttaacatcc-aaagccaggaagatatgtaactggatgaaaaaaggcaatcaataaatgtcaatgttgagataccagatatattagaattatctgacaaagagtttaaagc-agtcatgataaaaatacatcaatgaggctaggtgcggtggctcatgcctgcaatcgcagcactttgggaggctgaagtgggaggatcttgaggtcaagagattgagatcatcctggccaacatggtgaaaccctctgtctactaaaaacacaaaaattatctgggtgtgatggtgcgcacctgtagtcccag----------------------------------ctattcaggaggctgaggcaggagaatcacttgaaccag------ggaggt------tgcagtgagccaagatcgggccactgcactccagcctggtgacaaagcgagactccatct--aaaaaaaa-acaaaa-gtcaatgagcaaaacataaagtgtatgcttaaaatatactttacacaaatgaaagagtacaaattgtcacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-gaaaaacccaataaccaaaataaaaggttcagttgatggctcaacagcagaatggaggtaaaaagaaaagtatcagtgaactagaagataaaacattagaaaatttccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatataacagagcttaagggacctgtgggact-aaaaaaaactatctgatattcatctcaccagagtcctagaaggaaagatgaaaaagagcagggctgaaaaagtattcaaaaacaatacagttgaaaatccccccaatttag-------caagagacataaacctacaaattcaagaaggtgagcaaatcccaaacaggataaactcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagacaaggaaaaagttgtaaatgcaaccagagaaagaaacaccttacctttaggggaaaacaattaaaattat-gtggatttctcattattttt i rheMac8.chr16 I 1698 C 0 s macFas5.chr16 28103879 2734 - 80997621 TATGCTATTTTGACtgtttttctttttcttattcactaagatgaactctcagttcatttattttt--gttttattcttgtttaatatttaaatattaaaggctatttaaagtgtatacattttatcaaagatcatttttataacaccccacaagtcttgatatgtaatattctcattataaacgagttacacatttttctttcctttacattatagattcttcCGCTTTGGTCTTCCAAGTCAGTATATCTTCTGCAGTTTATCTCACTTATTGTGTACTTTAATGACTGTATGCTCCATTATTAGTTTAGTATCTGATATTGTGCTTGGTTGTGTCTCCCCCCCCATTATACATGTTTGTTTTTTATTAATttttca-ttttgaaataatttcatactcatagaaagttctaaacatagtacaaaggattcccatatgccttcacttggattcctcaaacgttaacattttaccatgcttctctaacattatttctatatatatatgtgtgtgttactactgttggtttttaaaagtaagttgcagatagaatttcccattatcactaaataccactttatccctatgtacttcagtgtgtatttctttagtcacagcccaatgatcaaaaccaaaatattaacaccaatgcaggatattgtctCTGGTTGGTTTTTATTCATGgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtg-tgtgtgtgCATGCGCGCACGTGTGTGTGTGTTTGTATTTGTCAatattggtaatagcttcccttatgtctttaaatgcatttattatgtttagttaaaaCCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccacattctttctgctaagtacaactaaaaattctggatattatatacaaagcaaacacaagaggactctgaaaggtgaagtgaagaaagcagccaggctagaagcctcaggacttaaggaacaataaggtggggttctctgggttttctttttgctgcaagtaccc--cagacttggagcttgagaagcctgcaactctgaaactctaatggatgcgcacgcacacacacacacacacacacacaca--------------cacacacac-----------aca---cacaaagttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagaaggtatctgctgtgctccagaaacaactatggcttcactgccagtcacaccagtaaaagccgggtggggagatagacttccatccctgagaagctgtgatgagtttccctaacacccgccactgagatagtgtccgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-agacccccgtccccaac------agacatagatgtagacatagagtgtcagtggagaccatgtggagggccggagctctcatctctgccccgcagtaatggtgtgctcccctaccttgcttgtcagcacaggctgaataggggaactgATCTATTCAGCGAACTAATCTATTCAGGGAACTAATCTTGTCACATtaccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagagaaagccagccaaaatgaaagattacataagatcc--------------------------agagtttcataacgtaatacaaagagggccaggtactaat-aaaaaatcacttaacatcc-aaagccaggaagatatgtaactggatgaaaaaaggcaatcaataaatgccaatgttgagataccagatatattagaattatctgacaaagagtttaaagc-agtcatgataaaaatacatcaatgaggctaggtgcggtggctcatgcctgcaatcgcagcactttgggaggctgaagtgggacgatcttgaggtcaagagattgagatcatcctggccaacatggtgaaaccctctgtctactaaaaacacaaaaattatctgggtgtgatggtgcacacctgtagtcccag----------------------------------ctattcaggaggctgaggcaggagaatcacttgaaccag------ggaggt------tgcagtgagccaagatcgggccactgcactccagcctggtgacaaagcgagactccatct--aaaaaaaa-acaaaa-gtcaatgagcaaaacataaagtgtatgcttaaaatatactttacacaaatgaaagagtacaaattgtcacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-gaaaaacccaataaccaaaataaaaggttcagttgatggctcaacagcagaatggaggtaaaaagaaaagtatcagtgaactagaagataaaacattagaaaatttccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatataacagagcttaagggacctgtgggact-aaaaaaaactatctgatattcatctcaccagagtcctagaaggaaagatgaaaaagagcagggctgaaaaagtattcaaaaacaatatagttgaaaatccccccaatttag-------caagagacataaacctacaaattcaagaaggtgagcaaatcccaaacaggataaactcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagacaaggaaaaagttgtaaatgcaaccagagaaagaaacaccttacctttaggggaaaacaattaaaattat-gtggatttctcattaTTTTT i macFas5.chr16 I 2469 C 0 s macNem1.NW_012014910v1 2147797 2743 + 10377808 TATGCTATTTTGACTGTTTTTCTTTTTCTTATTCACTATGATGAACTCTCAGTTCATTTATTTTT--GTTTTATTCTTGTTTAATATTTAAATATTAAAGGCTATTTAAAGTGTATACATTTTATCAAAGATCATTTTTATAACACCCCACAAGTCTTGATATGTAATATTTTCATTATAAACGAGTTACACATTTTTCTTTCCTTTACATTATAGATTCTTCCGCTTTGGTCTTCCAAGTCAGTATATCTTCTGCAGTTTATCTCACTTATTGTGTACTTTAATGACTGTATGCTCCATTATTAGTTTAGTATCTGATATTGTGCTTGGTTGTGTCTCCCCCCCCATTATACATGTTTGTTTTTTATTAATttttca-ttttgaaataatttcatactcatagaaagttctaaacatagtacaaaggattcccatatgccttcacttggattcctcaaacgttaacattttaccatgcttctctaacattatttctatatatatatgtgtgtgttactactgttggtttttaaaagtaagttgcagatagaatttcccattatcactaaataccactttatccctatgtacttcagtgtgtatttctttagtcacagcccaatgatcaaaaccaaaatattaacaccaatgcaggatattgtctCTGGTTGGTTTTTATTCA-------------------------TGgtgtgtgtgtg-tgtgtgtgcgcgcgcgcgtgtgtgtgtgtgtttgtatttgtCAatattggtaatagcttcccttatgtctttaaatgcatttattatgtttagttaaaaCCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccacattctttctgctaagtacaactaaaaattctggatattatatacaaagcaaacacaagaggactctgaaaggtgaagtgaagaaagcagccaggctagaagcctcaggacttaaggaacaatcaggtggggttctctgggttttctttttgctgcaagtaccc--cagacttggagcttgagaagcctgcaactctgaaactctaatggacgcgcacgcacacacacacacacacacacacaca--------------cacacacac-----------aca---cacacagttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagaaggtatctgctgtgctccagaaacaactatggcttcactgccagtcacaccagtaaaagccgggtggggagatacacttccatccctgagaagctgtgatgagtttccctaacacccgccactgagatagtgtccgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-agacccccatccccaac------agacatagatgtagacatagagtgtcagtggagaccatgtggagggccggagctctcatctctgcctcgcagtaatggtgtgctcccctaccttgcttgtcagcacaggctgaataggggaactgatctattcagcgaactaatctattcagggaactaatcttgtcacattaccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagagaaagccagccaaaatgaaagattacataagatcc--------------------------agagtttcataacgtaatacaaagagggccaggtactaat-aaaaaatcacttaacattc-aaagccaggaagatatgtaactggatgaaaaaaggcaatcaataaatgccaatgttgagataccagatatattagaattatctgacaaagagtttaaagc-agtcatgataaaaatacatcaatgaggctaggtgcggtggctcatgcctgcaatcgcagcactttgggaggctgaagtgggaggatcttgaggtcaagagattgagatcatcctggccaacatggtgaaaccctctgtctactaaaaacacaaaaattatctgggtgtgatggtgcgcacctgtagtccctgttttttaaatttaaaaaacatgtacaggacttacctattcaggaggctgaggcaggagaatcacttgaaccag------ggaggt------tgcagtgagccaagatcgggccactgcactccagcctggtgacaaagcgaaagtccatct--aaaaaaaa-acaaaa-gtcaatgagcaaaacataaagtgtatgcttaaaatatactttacacaaatgaaagagtacaaattgtcacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-gaaaaacccaataaccaaaataaaaggttcagttgatggctcaacagcagaatggaggtaaaaagaaaagtatcagtgaactagaagataaaacattagaaaatttccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatataacagagcttaagggacctgtgggact-aaaaaaaactatctgatattcatgtcaccagagtcctagaaggaaagatgaaaaagagcagggctgaaaaagtattcaaaaacaatatagttgaaaatccccccaatttag-------caagagacataaacctacaaattcaagaaggtgagcaaatcccaaacaggataaactcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagacaaggaaaaagttgtaaatgcaaccagagaaagaaacaccttacctttaggggaaaacaattaaaattat-gtggatttctcattaTTTTT i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2054646 2695 - 8458610 tatgctattttgactgtttttctttttcttattcactaagatgaactctcagttcatttatttttaggttttattcttgtttaatatttaaatattaaaggctatttaaagtgtatacattttatcaaagatcatttttataacaccccacaagtcttgatatgtaatattttcattataaacgagttacacatttttctttcctttacattatagattcttcCGCTTTGGTCTTCCAAGTCAGTATATCTTCTGCAGTTTATCTCACTTATTGTGTACTTTAATGACTGTATGCTCCGTTATTAGTTTAGTATCTGATATTGTGCTTGGTTGTGTCTCCTCCCCCATTATACATGTTTGttttttattaatttttca-ttttgaaataatttcatactcatagaaagttgtaaacatagtacaaaggattcccatatgccttcacttggattcctcaaacgttaacattttaccatgcttctctaacattatttc--tatatatatgtgtgtgttactgctgttggtttttaaaagtaagttgcagatagaatttcccattatcactaaataccactttatccctatgtacttcagtgtgtatttctttagtcacagcccaatgatcaaaaccaaaatattaacaccaatgcaggatattgtctCTGGTTGGTTTTTATTCA-------------------------TGgtgtgtgtgtg-tgtgtgt------gcgcgtgtgtgtgtgtgtTTGTATTTGTTAATATTGGTAATAGCTTCCCTTATGTCTTTAAATGCATTTATTATGTTTAGTTAAAACCCAGTTGAAGATTTGCTGActgggaagacggagtggacatacttttccacattctttctgctaagtacaactaaaaattctggatattatatacaaagcaaacacaagaggactctgaaaggtgaagtgaagaaagcagccaggctagaagcctcaggacttaaggaacaataaggtggggttctctgggttttctttttgctgcaagtaccc--cagacttggagcttgagaagcccgcaactctgaaactctaatggatgcg----------------cacacacacacaca--------------tacacacac-----------aca---cacaaagttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagaaggtatctgctgtgctccagaaacaactatggcttcactgccagtcacaccagtaaaagccgggtggggagatagacttccatccctgagaagctgtgatgagtttccctaacacccgccactgagatagtgtccgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-agacccccgtccccaac------agacataggcatagacatagagtgtcagtggagaccatgtggagggccagagctctcatctctgccccgcagtaatgatgtgctcccctaccttgcttgtcagcacaggctgaataggggaactgatctattcagcgaactaatctattcagggaactaatcttgtcacattaccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagggaaggccagccaaaatgagagattacataagatcc--------------------------agagtttcataacataatacaaagagggccaggtactaat-aaaaaatcacttaacatcc-aaagccaggaagatatgtaactggatgaaaaaaggcaatcaataaatgccaatgttgagataccagatatattagaattatctgacaaagagtttaaagt-agtcatgataaaaatacatcaatgaggccaggtgcggtggctcactcctgcaattgcagcactttgggaggctgaagtgggaggatcttgaggtcaagagattgagatcatcctggccaacatggtgaaaccctctgtctactaaaaacacaaaaattatctgggtgtgatggtgcgcacctgtagtcccag----------------------------------ctattcaggaggctgaggcaggagaatcacttgaaccag------ggaggtggaggctgcagtgagccaagatcgggccactgcactccagcctggtgacaaagcgagactccatctaaaaaaaaaa-acaaaa-gtcaatgagcaaaacataaagtgtatgcttaaaatatactttacacaaatgaaagagtacaaattgtcacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-gaaaaacccaataaccaaaataaaaggttcagttgatggctcaacagcagaatggaggtaaaaagaaaagtatcagtgaactagaagataaaacattagaaaatttccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatataacagagcttaagggacctgtgggact-aaaaaaaactatctaatattcatctcaccagagtcctagaaggaaagatgaaagagagcagggctgaaaaagtattcaaaaacaatatagttgaaaatctccccaatttag-------caagagacataaacctacaaattcaagaaggtgagcaaatcccatacaggataaactcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagacaaggaaaaagttgtaaatgcaaccagagaaagaaacaccttacctttaggggaaaacaattaaaattat-gtggatttctcattaTTTTT i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64987732 2718 + 75148670 tatgctattttgactgtttttctttttcttattcactaagatgaactctcagttcatttatttttaggttttattcttgtttaatatttacatattaaaggctatttaaagtgtatacattttatcaaagatcatttttataacaccccacaagtcttgatatgtaatattttcattataaacgagttacacatttttctttcctttacattatagattcttctGCTTTGGTCTTCCAAGTCAGTATATCTTCTGCAGTTTATCTCACTTATTGTGTACTTTAATGACTGTATGCTCTATTGTTAGTTTAGTATCTGATATTGTGCTTGGTTGTGTCTCCTCCCCCATTATACATGTTTG-TTTTTATTACTttttca-ttttgaaataatttcatactcatagaaagttgtaaacatagtacaaaggattcccatatgccttcacttggattcctcaaacgttaacattttaccatgcttctttaacattatttctatatatatgtgtgtgtgttactactgttggtttttaaaagtaagttgcagatagaatctcccattatcactaaataccactttatccctatgtacttcagtgtgtatttctttagtcacagcccaatgatcaaaaccaaaatattaacaccaatgcaggatattgtctCTGGTTGGTTTTTATTCATGgtgtgt-------------------gtgtgtgtgtg-tgtgtgtgCGCGC--GCGCGTGTGTGTGTGTTTGTATTTGTCAatattggtaatagcttcccttatgtctttaaatgcatttattatgtttagttaaaaCCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccacattctttctgctaagtacaactaaaaattctggatattatatacaaagcaaacacaagaggactctgaaagatgaagtgaagaaagcagccagtctagaagcgtcaggacttaagtaacaataaggtggggttctctgggttttctttttgctgcaagtaccc--cagacctggagcttgagaagcctgcaactctgaaacactaatggatgtt--------------cccgcgcacgcgcgtg--------------caccccccctcccccccccgaca---cacaaacttccaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagaaggtatctgctgtgctccagaaacaactatggcttcactgccagtcacaccagtaaaagccgggtggggagattgacttccatccctgagaagctgtgatgagttcccctaacacccgccactgagatagtgtccgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-agacccccgtccccagcagccatagacatagacatagacatagagtgtcagtggagaccatgtggagggccggagctctcatctctgccccgcagtaatggcgtgctcccctaccttgcttgtcagcacaggctgaataggggaactgATCTATTCAGCGAACTAATCTATTCAGGGAACTAATCTTGTCACATtaccttcatgtgacagtaatgaggtagcccctagtcc-------cttgctagaacaatgtcagggaaggccagccaaaatgacagattacataagatcc--------------------------agagtttcataacataatacaaagagggccaggtactaat-aaaaaatcacttaacatcc-aaagccaggaagatatgtaactggatgaaaaaaggcaatcaataaatgccaatgttgagataccagatatattagaattatctgacaaagagtttaaagc-agtcatgataaaaatacatcaatgaggccgggtgtggtggctcacgcctgcaatcggagcactttgggaggctgaggtgggaggatcttgaggtcaagagattgagatcatcctggccaacatggtgaaaccctctctctactaaaaacacaaaaattttctgggtgtgatggtgcgcacctgtagtcccag----------------------------------ctattcaggaggctgaggcaggagaatcacttgaaccag------ggaggt------tgcagtgagccaagatcgggccactgcactccagcctggtgacaaagtaagactccatct--aaaaaaaa-acaaaa-gtcaatgagcaaaacataaagtgtacgcttaaaatgtactttacacaaatgaaagagtacaaattgtcacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-gaaaaacccaataaccaaaataaaaggttcagttgatggctcaacagcagaatggaggtaaaacgaaaagtatcagtgaactagaagatagaacattagaaaatttccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatataacagagtttaagggacctgtggaactaaaaaaaaactatctaatattcatctcacccgagtcctagaaggaaagatgaaagagggcaggactgaaaaagcattcaaaaacaatatagttgaaaatccccccaatttag-------caagagacgtaaacctacaaattcaagaaggtgagcaaatcccaaacaggataaactcaaagaaatttgtgccaacacacataatagttaaacttctgaaaagtaaagacaaggaaaaagttgtaaatgcaaccagagaaagaaacaccttacttttaggggaaaacaattaaaattat-gtggatttctcattaTTTTT i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2250208 2700 + 4244037 tatgctattttgactgttt---tttttcttattcactaagatgaactctcagttcatttatttttaggttttattcttgtttaatatttaaatattaaaggctatttaaagtgtatgcattttatcaaagatcatttttataacaccccacaagtcttgataggtaatattttcattatAAACGAGTTACACATTTTTCTTTCCTTTACGTTATAGATTCTTCCGCTTTGGTCTTCCAAGTCAGTGTATCTTCTGCAGTTTATCTCACTTACTGTGCACTTTAATGACTGTATGCTCCATTATTAGTTTAGTATCTGATATTGTGCTTGGTTGTGTCTCCTCCCCCATTATACGTGTTTGTTTTTTATTAATttttcc-ttttgaaataatctcatactcatagaaagttctaaatatagtacaaaggattcccatatgccttcacttgaattcctcaaacgttaacattttaccatgcttctctaacattatttctatatatatatgtgtatgttactgctgttggtttttaaaagtaagttgcagatagaatttcccattatcactaaataccactttatccctatgtacttcagtgtgtatttctttagtcacagcccaatgatcaaaaccaaaatattaacaccaatgcaggatattgtctCTGGTTGGTTTTTATTCATGgtgtgt-------------------gtgtgtgtgtg-tgtgtgtgcgcgcgtgcgtgtgtgtgtgtgtTTGTATTTGTCAATATTGGTAATAGCTTCCCTTATGTCTTTAAATGCATTTATTATGTTTAGTTAAAACCCAGTTGAAGATTTGCTGActgggaagatggagtggacatacttttccacattctttctgctaagtacaactaaaaattctggatattatacacaaagcaaacacaagaggactctgaaaggtgaagtgaagaaagcaaccaggctagaagcctcaggacttaaggaacaataaggtggggttccctgggttttctttttgctgcaagtaccc--cagacttggagcttgagaagcctgcaactctgaaactctaatggatgcg--------------cacacacacacacata--------------cacacacac-----------aca---cacaaagttctaataaatgcttctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaacatttagaaggtatctgctgtgctccagaaacaactatggcttcactgccagtcacaccagtaaaagccgggtggggagatagacttccatccctgagaagctgtgatgagtttccctaacacccgccactgagatagtgtccgagaaggccaagtagggctgtgaaaccttaatctctgccagccagtaa-agacccccgtccccaac------agacatagacatagacatagagtgtcagtggagaccatgtggagggccggagctctcatctctgccccgcagtaatgatgtgctcccctaccttgcttgtcagcacaggctgaataggggaactgatctattcagcgaactaatctattcagggaactaatcttgtcacattaccttcatgtgacagtaatgaggtagcccctagtcg-------cttgctagaacaatgtcagggaaggccagccaaaatgaaagattacataagatcc--------------------------agagtttcataacataatacaaagagggccaggtactaat-aaaaaatcacttaacatcc-aaagccaggaagatatgtaactggatgaaaaaaggcaatcaataaatgccaatgttgagataccagatatattagaattatctgacaaagagtttaaagt-agtcatgataaaaatacatcaatgaggccaggtgcggtggctcactcctgcaatcgcagcactttgggaggctgaagtgggaggatcttgaggtcaagagattgagatcatcctggccaacatggtgaaaccctctgtctactaaaaacacaaaaattatctgggtgtgatggtgcgcacctgtagtcccag----------------------------------ctattcaggaggctgaggcaggagaatcacttgaaccag------ggaggt------tgcagtgagccaagatcgggccactgcactccagcctggtgacaaagcgagactccatct--aaaaaaaa-ccaaaa-gtcaatgagcaaaacataaagtgtatgcttaaaatatactttacacaaatgaaagagtacaaattgttacaaataaataaaagataaaacga------------------tatatgtgaattttggaact-gaaaaacccaataaccaaaataaaaggttcagttgatggctcaacagcagaatggaggtaaaaagaaaagtatcagtgaactagaagataaaacattagaaaatttccaatccaaacaacagagaaaatacactgga-aaagcctaaaaatataacagagcttaagggacctgtgggact-aaaaaaaactatctaatattcatctcaccagagtcctagaaggaaagatgaaagagagcagggctgaaaaagtattcaaaaacaatatagttgaaaatctccccaatttag-------caagagacataaacctacaaattcaagaaggtgagcaaatcccatacaggataaactcaaagaaatttgtgccaacacacatagtagttaaacttctgaaaagtaaagacaaggaaaaagttgtaaatgcaaccagagaaagaaacaccttacctttaggggaaaacaattaaaattat-gtggatttctcattaTTTTT i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 5906 2603 + 37134 tatgct-ttttggctgtttttctttttcttattcactaagatgtacacttagttcatttattgttaggttttattcttgtttaatatttaaatattaaaggctacttaaagtgtatacattttatcacagaccatttttatagcaccccacaagtcttgatatgtaatattttcattataatgcagtgacactttt---tttcctttacattgtagactcttcCATTTT-GTCTTCCACGTCAGTATATCTTCTGTAGTTTATCTCATGTATTGTGTACTTCAATGACTATATGCTCTGTTATTACTTTCGTATCTAATACTATGCTTGGTTGTGTCTCCTTCCCCATTATACATGTTTA-TTTTTATTAATttttcatttttgaaataatttcatactcttagaaagttgtaaacataatacaaaggattcccatatgccttcac-tggattcctcaaatgttaacattttaccatgcttctttaacatggtttctatgcatatatg----tgttactactgttggtttttaagagtaagttgcagttagaatttccttttatcactcatttccactttatccctatgtacttcagtgtgtgcttcttTGGTCACAGCCCAATGATTAAAACCAAAATCTTAACACCGGTGCAGGATATTGTCTCTGATTGGTTCTTACTCA-------------------------TGTTGTG-----T-T-----------------------TTTTCCTCTGTATTTGTCTATATTGGCAACAGCTTCC------TC--AAAATGTATTTATTATGATCCGTTAAAACCCAGTTGAAGATTTGCTGActgagaagttggagtagacatacttttccacattcttcctccaaagcacaactacaaattctggatattatatataaagcatacacaagagaactccgaaaggtggagtgaagaaagcagccaggctagaaggctcaagacttaaggaacaataag---------tctgggttttctttttgctgcaagtactc--tggacttggagcctgagaaacctgcaactctgaaactctaatggatgca----cacaca----------------------------------cacacacac-----------aca---cacacagttccaataaacacctctttctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaa-atttagatgctaattgctctgctccagaagcaactatggcttcactgccaatcaccccagtaaaagccaggtggggt-ctagacttccgtccctgaaaagctgtaatgagtttccctaacactc-ccactgggatagtgaaagagaaggccaagtagggctgtgaaactttaatctctgccagccagtaattaaaccccaaccccaac------agac------atagacatagagcgtcagtggagaacatgtggagggccagagctctcatctctgctcagcagtaatgaggtgcttccccaccttggttgccagcacagggtgaataggggaactgatc-------------------------------------------tactttcatgtgacagtaatgatgcagcccctattccccattctcttgctagaacaatgt-------agccagaaaaaatgaaggattgcataaaatcc--------------------------agagtttcataacataatacaaacaaggccaggtattaat-aaaaaatcacttaacatat-aaaaaccaggagatatgtaacttgatg-aaaaagacaatcaataaatgccagtgttgagatgccagatatgttacaattatctgacaaagattttaaagc-aatcatgataaaaatacatcaatgaggccagacatggtggctcacacctgtaatcccagcactttgggaggctgagatgggtggatcatgaggtcaagagataaagactatcctggccaacatggtgaaacccaatctctactaaaaatacaaaaattagct-----tggtggcacatgcctgtaatcccag----------------------------------caactctggaggctgaggcaagagaatcacttgaacccgggaggtggaggt------tgcagtgagccgagatcacgctactgcactccaggctggtgacagagaaagactttgtct--aaaaaaaa-acaaaaggtcaatgaacaaaccataaagtgtatgtttaaaatatactttaaacaaatgaaagagtagaaagtatcaaaaagaaataaaagatataataaataactatattgaatatctatatgtaaattttggaactaaaaaaatgcaataaccaaaataaaaatctcagttgatggcgcaacagcagaatggggataaaaagaagagtatcagtgaactagaaaatagaacattagaaaatgtccaacccaaacaacagagaaaatataccaaagaaaaattaaaaatttaacagagcttaagggacctgtgggact-aaaacaaaagatgtaatattcatctccccagaatcctagaaggaaagatggaaaagggcaggtctgaaaaagtattcaaaagcaacacagttggaaatctccccaatttatgtctccccaagagacataaacctacaaattcaacaaggtaagaaaatcccaaataggataagctcaaagaattttgtgcaaacacacatagtagtt-aacttatgaaaagtaaagat------aaagttgtaaatgcactcagagaaagaaacaccatacctttagggggaaacaattaaaattgcagtggatttctcatgattttt i calJac3.chr5_ACFV01176693_random C 0 C 0 s saiBol1.JH378271 1891363 2640 + 3513951 tatgct-ttttggctgtttttctttttcctattcactaagatgcacacttagttcatttattgttaggttttattcttgtttaatatttaaatattaaaggctacttaaaatgtatacattttatcacagaccatttttatagcaccccacaagtcttgatacgtaatattttcattctaatccagtgacactttt---tttcctttacattgtggtttcttcCCCTTTGGTCTTCCCAGTCAGTGTATCCCCTGTAGTTTATCTCACTTATTGTGTACTTCAATGACTATATGCTCTGTTATTACTTTTGTGTCTAATATTATGCTTGGTTGTGTCT-CTTCCCCATCATACATGTTTA-TTTTTATTAATtttttatttttgaaataatttcatactcttagaaagttgtcaacatagtacaaaggattcccatatgccttcac-tggattcctcaaatattaacattttaccatgattctttaacgttatttctatacatgtagt----tgttactactgttggtttttcagagtaagttgcagttagaatttccttttatcactaaattccacttcatccctatgtacttcagtgtgtgtttctttggtcacagcccaatgattaaaaccaaaatcttaacaccgatgcaggatattatctCTGGTTGGTTCTTACTCA-------------------------TGTTGTATGTTTT-T-----------------------TTTTTCTCTGTATTTGTCTATATTGGTAATAGCTTCCCTTATGTC--AAAATGTGTTTATTATGTTTAGTTAAAACCCAGTTGAAGATTTGCTGAccgggaagatggagtgggtatacttttccacattcttcctcctaagtacaactacaaattctggatattatacataaagcaaacacaagaggactctgaaaggtggagtgaagaaagcagccaagctagaaagctcaggacttaaggaacaagaag---------tctgggttttctttttgctgcaagtattc--tagacatggagcttgagaagcctgcaactctgaaactctaatggatgca----cacacacaagcacacacacacacacatgcacacgcacacgcacacacac-----------aca---cacacagttccaataaacacctctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaa-atttagatgctaactgctgtgctccggaagcaactatggcttcactgccaatcaccccagtaaaagtccggtgggaa-ctaggcttcggtccctgagaagctgtaattagtttccctaacactc-ccactgggatagtgaaagagaaggccaagtaaggctgtgaaactttaatgtgtgccagccagtaa-tgacccccacccccaac------agac--------agacacagagtgtccttggagaccatgtggatggccagagctctcatctctgctcagcagtaatgagctgcttccccaccttggttgccggcacagagtgaatcggggaactgatc-------------------------------------------cactttcatgtgacagtaatgaggcagcctctatttcccattctcttgctagaacaatgt-------gggaagtcaaaacaaagg-ttacgtaaaatcc--------------------------agagtttcataacataatacaaatagggccaggtactaataaaaaaatcacttaacatat-aaaaaccaggagatacgtaactggatg-aaaaagacaatcaataaatgccaatgttgagatgccagatatgttacaattatctgacaaagattttaaagc-aatcttgataaaaataaatcaatgaagccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggataatgaggtcaagagataaagactatcctgaccaacatggtgaaacctcgcctctactaaaaatacaaaaattaacc-agtgtggtggcacacatctgtaatcccag----------------------------------ctactctggaggctgaggcaggagaatcgcttgaacccaggacgaggaggt------tgctgtgagccgagatcacgccactgcactccaggctggtgacagagcaagacttcatct--aaaaaaaa-aaaaaaagtcaatgaacacaacataaagtgtatgtttaaaatatacttttaacaaatgaaagagtagaaaccatcaaaaagaaataaaa-atataataaataactatattgattatgtgtatgtaaattttagaact-aaaaaatgcgataactgaaataaaaatctcagttgatggctcaacagcagaatggagttaaaaagaaaagtatcagtgaactagaaaatagaacattagaaaatgtccaacccaaacaactgagaaaatatactgaagaaaacttaaaaatttaacagagcttaagggacctgtgggact-aaaacaaaagatgttatattcgcctccccagagtcctagaaggaaagatgaaaaagggcagggctgaaaaagtattcaaaagaaacatagttgaaaatctcccccatttag-------caagagacataaacctacaaattcaacaaggtgagaaaatcccaaataggaaaagctcaaagaaatttgtgcaaacacacataatagtt-aacttatgaaaagtaaagat------aaagttgtaaatacagtcagagaaagaaacaccttatctttagaggaaaacaattaaaattgcagtggatttcttttttttctt i saiBol1.JH378271 C 0 N 0 s cebCap1.NW_016107543v1 32977 2643 - 4077172 tatgtt-ttttggctgtttttctttttcttattcactaagatgtacacttagttcatttattgttaggttttattcttgtttaatatttaaatattaaaggctacttaaagtgtatacattttatcacagaccattttcatagcaccccacaagtcttgatatgtaatattttcattataatccagtgacactttt---tttcctttacattgtagattcttcCGTTTTGGTCTTCCAAGTCAGTATATCCTCTGTAATTTATCTCACTTATTGTGTACTTTAATGACTATATGCTCTGTTATTACTTTTGTATCTAATATTATGCTTGGTTGTGTCT-CCTCCCCATCATACATGTTTA-TTTTTATTAATttttcatttttgaaataatttcatactcttagaaagttgtaaacatagtacaaaggattcccatatgccttcac-tagattcctcaaatgttaacattttaccatgcctctttaacattatttctatacatataag----cgttactactgttggtttttaagagtaagttgcagttagaatttccttttatcactaaattccgctttatccctacgtacttcagtgtgtgtttcttTGGTCACAGCCCAATGATTAAAACCAAAATCTTAACACTCATGCAGGATATTGTCTCTGGTTGGTTCTTACTCA-------------------------GGTTGTG--TTTT-T-----------------------TTTTTCTCTGTATTTGTCTATATTGATAATAGCTTCCCTTATGTC--AAAATGTATTTATTATGTTTAGTTAAAACCCAGTTGAAGATTTGCAGAccgggaagatggagtgggtatacttttccacattcttcctcctaagtacaactacaaattctggatattatacataaagcaaacacaagaggactctgaaaggtggagtgaagaaagaagccaggctagaaagctcagggcttaaggaacaagaag---------tctgggttttctttttgctgcaagtactc--tagacatggagcctgagaagcctgcaactctgaaactctaatggacgcg----cgcgcgcacacacacacacacacaca--------------cacacacac-----------aca---cacacagttccaataaacacctatctctacctaaagggtcagaaaagaggtagcttggcaagaagaaaaa-atttagacgctaactgctctgctccggaagcaactatggcttcactgccaatcatcccagtaaaagccgggtgggga-ctagacttccttccctgagaagctgtaatgagtttccccaacactc-ccactgggatagtgaaagagaaggccaagtagggctgtgaaactttaatctctgccagtcagtaa-tgacccccatccccaaa------acac------atagacgcagagtgtcagtggagaccatgtggagggccagagctctcatctctgctcagcagtaatgaggtgcttccccaccttgcttgccagaacagggggaatcggggaactgatc-------------------------------------------tactttcatgtgacagtaatgaggcagcctctattccccattctctcgctagaacaatgt-------agccagccaaaacaaaagattacataaaatccagccaaaacaaaagattacataaaaaagagtttcataacataatacaaatagggacaggtactaat-aaaaaatcacttaacacat-aaaaaccaggagatatgtaactggatg-aaaaagacaatc-ataaatgccaatgttgagatgccagatatgttacaattatctgacaaatattttaaagc-aatcatgataaaaataaatcaataaggccaggcatggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggatcatgaggtcaagagataaagactatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcc-agtgtggtggcacacgcctgtaatcccag----------------------------------ctactctggaggctgaggcaggagaatcgcttcaacccaggaggtggaggt------tgcagtgagccgagatcacgccactgcactccaggctggcgacagagcaagacttcgtct--aaaaaaaa--------gtcaatgaacaaaacatagagtgtatgtttaaaatatactttaaa-aaatgaaagagtagaaagtatcaaaaagaaataaaagatataataaataactatattgaatatctatatgtaaattttggaact-aaaaaatgcgataaccaaaataaaaacctcagttgatggctcaatagcagaatggagat-aaaagaaaagtatcagtgaactagaaaataaaacattagaaaatgtccaacccaaacaacagagaaaatatactgaagaaaaattaaaaatttaacagagcttaagggacctgtgggact-aaaataaaagatgtaatattcatctccccagagtcccagaaggaaagctgaaaaagggcagggctgaaaaagtgttcaaaagcaacatagttgaaaatctccccaatttag-------caagagacataaacctacaaattcaacaaggtaagaaaatcccaaataggataagctcaaagaaatttgtgcaaacacacatagtagtt-aacttatgaaaagtaaagat------aaagttgtaaatgcaatcagagaaagaaacaccttacctttagaggaaaacaattaaaattgcagtggatttttcattattttt i cebCap1.NW_016107543v1 C 0 N 0 s aotNan1.NW_018505111v1 26454 2604 - 94492 tatgct-ttttggctgtttttctttttcttattcactaagatgtacacttagttcatttattgttaggttttattcttgtttaatatttaaatattaaaggctacttaaagtgtatacattttatcacagaccatttttatagcaccccacaagtcttgatatgtaatattttcattataatccagtgacagtttt---tttcccttacattgtagattcttctGTTTTGGTCTTCCAAGTCAGTATATCCTCTGTAGTTTACCCCACTCATTGTGTACTTTAATGACTATGTGCTCTGTTATTACTTTCGTATCTAATATTATGCTTGGTTGTGTCT-CCTCCCCATCATACCTGTTTA-TTTTTATTAATttttcatttttgaaataatttcacgcacttagaaagttgtaaacatagtacaaaggattcccatatgccttcac-tggattcctcaagtgttaacattttaccatgcttctttaacattatttctacacatatagg----tgttactactgttggtttttaagagtaagttgcagctagaatttccttttatcactaaattccattttatccctatgtacttcagtgtgtgtttctttggtcacagcccaatgattaaaactaaaatcttaacaccgatgcaggatactgtCTC--GTTGGTTCTTACTCA-------------------------TGTTGTG---TTT-T-----------------------TTTTTCTCTGTATTTGTCTACATTGGTAATAGCTTCCCTTTTGTC--AAAATGTATTTATTATGTTTCGTTAAAACCCAGTTGAAGATTTGCTGAccgggaagatggagtggatatacgtttccacattcttcctcctaagtccaactacaaattctggatattatacataaagcaaacacaagagaact--gaaaggtggagtgaagaaagcagccaggctagaaagatcaggacttaaggaacaagaag---------tctgggttttctttttgctgcaagtactc--tagacatggagcctgagaagcctgcaactctgaaactctaatggatgca----cacacacacaca----------------------------cacacacac-----------acagttcacactgttctaataaaaacctctctctacctaaagggtcagaaaagaggtggcttagcaagaagaaaaa-atttaaatgctaactgctctgctccagaagcaactatggcttcactgccaatcaccccagtaaaaaccaggtgggga-ctagacttccgtccctgagaagctgtaatgagtttccctaacactc-ccactgggatagtgaaagagaaggccaagtagggctgtgaaactttaatctctgccagccagtaa-tgacctccatccacaac------agac------atagacacagagtgtcagtggagaccatgtggagggccagagctctcagctctgctcagcagtaacgaggtgcttccccaccttga-agccagcacagggtgaacaggggaactgatc-------------------------------------------tactttcatgtgacagtaatgaggcagcctctattccccattctcttgctagaacaatgt-------agccagccaaaacaaaagattacataaaatcc--------------------------agagtttcataacataatacaaatagggccaggtactaat-aaaaaatcacttaacatat-aaaaaccaggagatatgtaactggatg-aaaaagacaatcagtaaatgccaatgttgagatgccagatatgttacaattatctgacaaagattttaaagc-aatcatgataaaaataaatcaatgagtctaggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcatgaggtcaagagataaagactatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattggcc-agcgtggtggcacacgcctgtaatcccag----------------------------------ctactctggaggctgaggcaggagaatcgcttgaacccgggaggtggaggt------tgcagtgggccgagatcgcaccattgcactcaaggctggtgacagggcaagacttcgtct--aaaaaaaaaaaaaaaagtcaataaacaaaacatagagtgtatgtttaaaatatactttaaacaaatgaaagagtagaaagtatcaaaaagaaataaaagatataataaataactatattgaatatccatatgtaaattttggaact-aaaaaatgcgataaccaaaataaaaatctcagttgatggctcaacagtagaata------aaaagaaaagtatcagtgaactagcaaatagaacattagaaaatgtccga-ccaaacaacagagaaaatatactgaagaaaagttaaaaatttaacagagcttaagggacctgtgggact-aaaacgaacgatgtaatattcatctccccagagtcctagaaggaaagatgaaaaagggcagggctgaaaaagtattcaaaagcaacatagttgaaaatctccccaatttag-------caagagacataaacctacaaattcaacaaggtgagaaaatcccaaataggataagctcaaagagatttgtgcaaacacacatagtagtt-aacttatgaaaagtaaagat------aaagttgtaaatgcagtcaaagaaagaaacaccttacctttaggggaaaacaattaaaattgcagtggatttctcatttttttt i aotNan1.NW_018505111v1 C 0 I 1 a score=72259.000000 s hg38.chr17_JH159148v1_alt 86965 22 + 88070 CAAGTGCTGACAGAAAAGAACT s gorGor5.CYUI01015385v1 4149529 22 + 4267968 caagtgctgatagaaaagaact i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30195543 22 - 77216781 caagtcctgatagaaaagaact i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28106613 22 - 80997621 CAAGTCCtgatagaaaagaact i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2150540 22 + 10377808 CAAGTCCtgatagaaaagaact i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2057341 22 - 8458610 CAAGTCCtgatagaaaagaact i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64990450 22 + 75148670 CAAGTCCtgatagaaaagaact i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2252908 22 + 4244037 CAAGTCCtgatagaaaagaact i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 8509 19 + 37134 taagtgctaaaagaaaaga--- i calJac3.chr5_ACFV01176693_random C 0 C 0 s aotNan1.NW_018505111v1 29059 22 - 94492 taagtgttgaaagaaaagaact i aotNan1.NW_018505111v1 I 1 N 0 a score=50476.000000 s hg38.chr17_JH159148v1_alt 86987 17 + 88070 AAAATGAGTagaaaatc s gorGor5.CYUI01015385v1 4149551 17 + 4267968 aaaatgagtagaaaatc i gorGor5.CYUI01015385v1 C 0 C 0 s rheMac8.chr16 30195565 17 - 77216781 aaaatgagtagaaaatc i rheMac8.chr16 C 0 C 0 s macFas5.chr16 28106635 17 - 80997621 aaaatgagtagaaaatc i macFas5.chr16 C 0 C 0 s macNem1.NW_012014910v1 2150562 17 + 10377808 aaaatgagtagaaaatc i macNem1.NW_012014910v1 C 0 C 0 s cerAty1.NW_012006043v1 2057363 17 - 8458610 aaaatgagtagaaaatc i cerAty1.NW_012006043v1 C 0 C 0 s chlSab2.chr16 64990472 17 + 75148670 aaaatgagtagaaaatc i chlSab2.chr16 C 0 C 0 s manLeu1.NW_012106252v1 2252930 17 + 4244037 aaaatgagtagaaaatc i manLeu1.NW_012106252v1 C 0 C 0 s calJac3.chr5_ACFV01176693_random 8528 17 + 37134 aatataagcacagaatc i calJac3.chr5_ACFV01176693_random C 0 N 0 a score=2591375.000000 s hg38.chr17_JH159148v1_alt 87004 1066 + 88070 aacaaagatatggaagaactcaaaaacaccatcaaccaacaggatctaattaacgtttatagaacagtccatccaacaatagtaaaatacacattcatttcaagtgtccatggaatatatttcaagatggaccacatcttgagccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactgcaatggactcaaactagaaattaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatacttttgaataatctctaggtcatcaaagaatacttaagggaaattttttaaaa--atgcattgaaatgaatgaaaatgaaaatacaacatgtcaaaacttgcgagacacaattaaagctgtgatgagagggaaagtcatagcattaaatgcatacatttgaaaagaggaaaagtctcaattaattatctaagctcccacctcaagaacctagaaaaagaagagaaaaataaactaaaagcaagcgcaaggaaggaaataataaatataaaagcagaaatcaatgaaattgaaaacagaataataatgaagaaaacaatgtgaaatagtgaaacaaagagctggttctttgaaaatataaatgacagtgaaagatcgaatgctttcccctgaactggaaatactaaatctcactgcttactctacacagtgctcaaagttttaaccagcacaataaggcaagaaaaaaaaataaaggaaaggaagaaataaaactgtctctgtttgtaggtagcatgattatctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactctgagaactaatgaatgagttttgaaagattggaagctacaagataaacatacacaatcagctgtattctatatattggcaatgaatgcatggacacagaaattgaaat-aaatgtcatttacaatctctctaaaacatacttaggtgtaaatttaaaaaacatgtacagggcttACCACAGCAGGTTTTTAAAAAAGTAGATATCAATAA s gorGor5.CYUI01015385v1 4149568 1066 + 4267968 aacaaagatatggaagaactcaaaaacaccatcaaccaacaggatctaattaacgtttatagaacagtccatccaacaatagtaaaatgcacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttgtaagagttgaaatcatagagtatgttctccaactgcaatggactcaaactagaagttaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatac-tttgaataatccctaggtcaacaaggaatacttaagggaaattttttaaaa--atgcattgaaatgaatgaaaatgaaaatacaacatgtcaaaacttgcgagacacaattaaagctgtgatgagagggaaagtcatagcattaaatgcatacatttgaaaagaggaaaagtctcaattaattatctaagctcccacctcaagaacctagaaatagaagagcaaaataaactaaaagcaagcgcaaggaaggaaatcataaatataaaagcagaaatcaatgaaattgaaaacagaataataatgaagaaaacaatgtgaaatagtgaaacaaagagctggttctttgaaaatataaatgacagtgaaagatcgaatgctttcacctgaactggaaatactaaatctcactgcttactctacacagtgctcaaagttttaaccagcacaataaggcaagaaaaaaaaataaaggaaaggaagaaataaaactgtctctgtttgtagatagcatgattatctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactctgagaactaatgaatgagttttgaaagattggaagctacaagataaacatacacaattagctgtattctatatattggcaatgaatgcatggacacagaaattgaaataaaatgtcatttacaatctctctaaaacatacttaggtgtaaatttaaaaaacatgtacagggcttatcacagcaggtttttaaaaaagtagatatcaataa i gorGor5.CYUI01015385v1 C 0 N 0 s rheMac8.chr16 30195582 1052 - 77216781 aacaaagatacagaagaactcaaaaacaccatcaaccagcaggatctaattaacgtttatagaacagtccatccagcaatagtaaaacacacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactacgatggactcaaactagaaattaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatacttttgaatagtccctaggtcagaaaggaagacttaagggaaatttttttaaaatatgcattgcaatgaatgaaaatgaaaatacaacatgtaaaaacttgggagacataattaaagctgtgatgagagggaaagtcatagcattaaatgcatatattcgaaaagaggaaaagtctc----aattatctaagctcccacctcaagaacctagaaaaataagagcaaaacaaactaaaagcaagcaaaaggaaggaaataataaatataaaagcagaaatcaataaaactgaaaacagagtaataataaagaaaacaaagggaaatagtgaaacaaggagctggttctttgaaagtataaatgacagtgaaagattgaatactttcccctaaattggaaatattaaatctcactgcttattctacacagtgctcaaagttttaaccagcacaataaggcaagaaacaaaaat-----aaaggaagaaatataactgtctctctttgtagatagcatgattgtctacatagaaaatctcaaggaatctatgaat----acaaacaaataagcaagcaaactctgagaactaatgaatgagtttagaaagattggaagctacaagataaacatacacaatctgctgtattctatatatgggcaatgaatgcatggacacagaagttgaaataaaatgtc----acaatccctctaaaacatacttaggtgtaaatttaaaaaacatgtacaggacttACCACAGCAGGTTTTTAAAAAAgtagatatcaataa i rheMac8.chr16 C 0 N 0 s macFas5.chr16 28106652 1056 - 80997621 aacaaagatacagaagaactcaaaaacaccatcaaccagcaggatctaattaacgtttatagaacagtccatccagcaatagtaaaacacacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactacgatggactcaaactagaaattaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatacttttgaatagtccctaggtcagaaaggaagacttaagggaaattttttaaaaatatgcattgcaatgaatgaaaatgaaaatacaacatgtaaaaacttgggagacataattaaagctgtgatgagagggaaagtcatagcattaaatgcatatattcgaaaagaggaaaagtctc----aattatctaagctcccacctcaagaacctagaaaaataagagcaaaacaaactaaaagcaagcaaaaggaaggaaataataaatataaaagcagaaatcaatgaaactgaaaacagagtaataataaagaaaacaaagtgaaatagtgaaacaaggagctggttctttgaaagtataaatgacagtgaaagattgaatactttcccctaaattggaaatattaaatctcactgcttattctacacagtgcttaaagttttaaccagcacaataaggcaagaaacaaaaat-----aaaggaagaaatataactgtctctctttgtagatagcatgattgtctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactctgagaactaatgaatgagtttagaaagattggaagctacaagataaacatacacaatctgctgtattctatatatgggcaatgaatgcatggacacagaagttgaaataaaatgtc----acaatccctctaaaacatacttaggtgtaaatttaaaaaacatgtacaggacttACCACAGCAGGTTTTTAAAAAAgtagatatcaataa i macFas5.chr16 C 0 N 0 s macNem1.NW_012014910v1 2150579 1056 + 10377808 aacaaagatacagaagaactcaaaaacaccatcaaccagcaggatctaattaacgtttatagaacagtccatccagcaatagtaaaacacacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactacgatggactcaaactagaaattaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatacttttgaatagtccctaggtcagaaaggaagacttaagggaaattttttaaaaatatgcattgcaatgaatgaaaatgaaaatacaacatgtaaaaacttgggagacataattaaagctgtgatgagagggaaagtcatagcattaaatgcatatattcgaaaagaggaaaagtctc----aattatctaagctcccacctcaagaacctagaaaaataagagcaaaacaaactaaaagcaagcaaaaggaaggaaataataaatataaaagcagaaatcaatgaaactgaaaacagagtaataataaagaaaacaaagtgaaatagtgaaacaaggagctggttctttgaaagtataaatgacagtgaaagattgaatactttcccctaaattggaaatattaaatctcactgcttattctacacagtgctcaaagttttaaccagcacaataaggcaagaaacaaaaat-----aaaggaagaaatataactgtctctctttgtagatagcatgattgtctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactctgagaactaatgaatgagtttagaaagattggaagctacaagataaacatacacaatctgctgtattctatatatgggcaatgaatgcatggacacagaagttgaaataaaatgtc----acaatccctctaaaacatacttaggtgtaaatttaaaaaacatgtacaggacttaccacagcaggtttttaaaaaagtagatatcaataa i macNem1.NW_012014910v1 C 0 N 0 s cerAty1.NW_012006043v1 2057380 1056 - 8458610 aacaaagatacagaagaactcaaaaacaccatcaaccagcaggatctaattaacgtttatagaacagtccatccagcaatagtaaaacacacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactacgatggactcaaactagaaattaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatacttttgaatagtccctaggtcagaaaggaagacttaagggaaatttttaaaaaatatgcattgcaatgaatgaaaatgaaaatacaacatgtaaaaacttgtgagacataattaaagctgcgatgagagggaaagtcatagcattaaatgcatatattcgaaaagaggaaaagtctc----aattatctaagctcctacctcaagaacctaggaaaataagagcaaaataaactaaaagcaagcaaaaggaaggaaataataaatataaaagcagaaatcaatgaaactgaaaacagagtaataataaagaaaacaaagtgaaatagtgaaacaaggagctggttctttgaaagtataaatgacagtgaaagattgaatactttcccctaaattggaaatattaaatctcactgcttattctacacagtgctcaacgttttaaccagcacaataaggcaagaaacaaaaat-----aaaggaagaaatataactgtctctgtttgtagatagcatgattgtctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactctgagaactaatgaatgagtttagaaagattggaagctacaagataaacatacacaatctgctgtattctatatatgggcaatgaatgcatggacacagaagttgaaataaaatgtc----acaatccctctaaaacatacttaggtgtaaatctaaaaaacatgtacaggacttatcacagcaggtttttaaaaaagtagatatcaataa i cerAty1.NW_012006043v1 C 0 N 0 s chlSab2.chr16 64990489 1050 + 75148670 aacaaagatacagaagaactcaaaaacaccatcaaccagcaggatctaattaacgtttatagaacagtccatccagcaatagtaaaatacacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactacgatggactcaaactagaaattaatgacagaaagataattggggaatcttcaaacacttggaaactaaacagcatacttttgaatagtccctaggtcagaaaggaagacttaagggaaatttaaaaaaaatatgcattgcaatgaatgaaaatgaaaatacaacatgtaaaaacttgtgagacataattaaagctgtgatgagagggaaagtcatagcattaaatgcatatatttgaaaagaggaaaagtctc----aattatctcaactcccacctcaagaacctagaaaaataagagcaaaataaactaaaagcaagcaaaaggaaggaaataataaatacaaaagcagaaatcaatgaaactgaaaacagagtaataataaagaaaacaaaatgaaatagtgaaacaaggagctggttctttgaaagtataaatgacagtgaaagattgaatactttcccctaaattggaaatattaaatcttactgcttattctacacagtgctcaaagttttaaccagcacaataaggctagaaacaaaaat-----aaaggaacaaatataactgtctctgtttgtagatagcatgattgtctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactcggagaactaatgaatgagtttagaaagattggaagctacaagataaacatacacaatctgctgtattctatatatgggcaatgaatg------cacggaagttgaaataaaatgtc----acaatccctctaaaacatacttaggtgtaaatttaaaaaacatgtacaggacttatCACAGCAGGTTTTAAAAGAAgtagatatcaataa i chlSab2.chr16 C 0 N 0 s manLeu1.NW_012106252v1 2252947 1053 + 4244037 aacaaagatac---agaactcaaaaacaccatcaaccagcaggatctaattaacgtttatagaacagtccatccagcaatagtaaaacacacattcatttcaagtgtccatggaatatatttcaagatggaccatatcttgggccataaaacaatctcaacaaatttataagagttgaaatcatagagtatgttctccaactacgatggactcaaactggaaattaatgacagaaagataactggggaatcttcaaacacttggaaactaaacagcatacttttgaatagtccctaggtcagaaaggaagacttaagggaaatttttaaaaaatatgcattgcaatgaatgaaaatgaaaatacaacatgtaaaaacttgtgagacataattaaagctgtgatgagagggaaagtcatagcattaaatgcatatattcgaaaagaggaaaagtctc----aattatctaagctcccacctcaagaacctagaaaaataagagcaaaataaactaaaagcaagcaaaaggaaggaaataataaatataaaagcagaaatcaatgaaactgaaaacagagtaataataaagaaaacaaagtgaaatagtgaaacaaggagctggttctttgaaagtataaatgacagtgaaagattgaatactttcccctaaattggaaatattaaatctcactgcttattctacacagtgctcaaagttttaaccagcacaataaggcaagaaacaaaaat-----aaaggaagaaatataactgtctctgtttgtagacagcatgattgtctacatagaaaatctcaaggaatctatgaatacaaacaaacaaataagcaagcaaactctgagaactaatgaatgagtttagaaagattggaagctacaagataaacatacacaatctgctgtattctatatatgggcaatgaatgcatggacacagaagttgaaataaaatgtc----acaatccctctaaaacatacttaggtgtaaatttaaaaaacatgtacaggacttACCACAGCAGGTTTTTAAAAAAgtagatatcaataa i manLeu1.NW_012106252v1 C 0 N 0